Pregenerated sensors for FAM174C (Homo sapiens)
Ensembl gene IDs: ENSG00000228300Ensembl transcript IDs: ENST00000409293.6, ENST00000469144.5, ENST00000485191.5, ENST00000585716.3, ENST00000590269.2
Found 108 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTGGGACCCTCGGCCAGGCTGGGACAGCATCCAGGAGGCGAGGCTaGATGGTCCAGCGGTGGGTGCAGGTGGCAACAGGTCGGCGGGCT | + |
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Preference number: 1 (lower is better) Translates to: PGTLGQAGTASRRRG*MVQRWVQVATGRRA Trigger: AGCCCGCCGACCTGTTGCCACCTGCACCCACCGCTGGACCATGCAGCCTCGCCTCCTGGATGCTGTCCCAGCCTGGCCGAGGGTCCCAGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| 3UTR CCA 90 bp | GGACCCTCGGCCAGGCTGGGACAGCATCCAGGAGGCGAGGCTGCATaGTCCAGCGGTGGGTGCAGGTGGCAACAGGTCGGCGGGCTGTGC | + |
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Preference number: 1 (lower is better) Translates to: GPSARLGQHPGGEAA*SSGGCRWQQVGGLC Trigger: GCACAGCCCGCCGACCTGTTGCCACCTGCACCCACCGCTGGACCATGCAGCCTCGCCTCCTGGATGCTGTCCCAGCCTGGCCGAGGGTCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| 3UTR GCA 90 bp | CTGGGACAGCATCCAGGAGGCGAGGCTGCATGGTCCAGCGGTGGGTaGAGGTGGCAACAGGTCGGCGGGCTGTGCAGGTTCCAAAAGGAG | + |
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Preference number: 1 (lower is better) Translates to: LGQHPGGEAAWSSGG*RWQQVGGLCRFQKE Trigger: CTCCTTTTGGAACCTGCACAGCCCGCCGACCTGTTGCCACCTGCACCCACCGCTGGACCATGCAGCCTCGCCTCCTGGATGCTGTCCCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| 3UTR CCA 90 bp | CAGCATCCAGGAGGCGAGGCTGCATGGTCCAGCGGTGGGTGCAGGTaGCAACAGGTCGGCGGGCTGTGCAGGTTCCAAAAGGAGCTCTCG | + |
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Preference number: 1 (lower is better) Translates to: QHPGGEAAWSSGGCR*QQVGGLCRFQKELS Trigger: CGAGAGCTCCTTTTGGAACCTGCACAGCCCGCCGACCTGTTGCCACCTGCACCCACCGCTGGACCATGCAGCCTCGCCTCCTGGATGCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| 3UTR CCA 90 bp | CAGGCTGGGACAGCATCCAGGAGGCGAGGCTGCATGGTCCAGCGGTaGGTGCAGGTGGCAACAGGTCGGCGGGCTGTGCAGGTTCCAAAA | + |
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Preference number: 1 (lower is better) Translates to: QAGTASRRRGCMVQR*VQVATGRRAVQVPK Trigger: TTTTGGAACCTGCACAGCCCGCCGACCTGTTGCCACCTGCACCCACCGCTGGACCATGCAGCCTCGCCTCCTGGATGCTGTCCCAGCCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| 3UTR GCA 90 bp | GCATGGTCCAGCGGTGGGTGCAGGTGGCAACAGGTCGGCGGGCTGTaGAGGTTCCAAAAGGAGCTCTCGGGTTGGCACTGGGTGAGACCA | + |
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Preference number: 1 (lower is better) Translates to: AWSSGGCRWQQVGGL*RFQKELSGWHWVRP Trigger: TGGTCTCACCCAGTGCCAACCCGAGAGCTCCTTTTGGAACCTGCACAGCCCGCCGACCTGTTGCCACCTGCACCCACCGCTGGACCATGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| 3UTR CCA 90 bp | TCCCAGAAAGGTTCCTTGGGTCACCTGCCCACCCAGCCTTGGCTCTaGGCTGCCATGTCCCCACGGGGGCAGGAGAGAGGCACAAGTCAC | + |
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Preference number: 1 (lower is better) Translates to: SQKGSLGHLPTQPWL*AAMSPRGQERGTSH Trigger: GTGACTTGTGCCTCTCTCCTGCCCCCGTGGGGACATGGCAGCCCAGAGCCAAGGCTGGGTGGGCAGGTGACCCAAGGAACCTTTCTGGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| 3UTR-3UTR TCA 90 bp | AGTCAGGCAAGGGAGCCTCAGCGTCCTGGGCGGTGGCTGTTGGGGTCCCTCCAGGGGCCAGCAGGGGAATaGGCGGTGGAGCAGGGGGTT | + |
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Preference number: 2 (lower is better) Translates to: SQAREPQRPGRWLLGSLQGPAGE*AVEQGV Trigger: AACCCCCTGCTCCACCGCTCATTCCCCTGCTGGCCC...CTGGAGGGACCCCAACAGCCACCGCCCAGGACGCTGAGGCTCCCTTGCCTGACT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| 3UTR-3UTR CCA 90 bp | TCAGGCAAGGGAGCCTCAGCGTCCTGGGCGGTGGCTGTTGGGGTCCCTCCAGTCGGGGTTGCTGGGCACTaGGGTGGGCCCCATCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: SGKGASASWAVAVGVPPVGVAGH*GGPHLL Trigger: CAGGAGATGGGGCCCACCCCAGTGCCCAGCAACCCC...GACTGGAGGGACCCCAACAGCCACCGCCCAGGACGCTGAGGCTCCCTTGCCTGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| 3UTR-3UTR CCA 90 bp | AGTCAGGCAAGGGAGCCTCAGCGTCCTGGGCGGTGGCTGTTGGGGTCCCTCCAGAGCGGTGGGTGCAGGTaGCAACAGGTCGGCGGGCTG | + |
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Preference number: 2 (lower is better) Translates to: SQAREPQRPGRWLLGSLQSGGCR*QQVGGL Trigger: CAGCCCGCCGACCTGTTGCCACCTGCACCCACCGCT...CTGGAGGGACCCCAACAGCCACCGCCCAGGACGCTGAGGCTCCCTTGCCTGACT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| 3UTR-3UTR CCA 90 bp | TCAGGCAAGGGAGCCTCAGCGTCCTGGGCGGTGGCTGTTGGGGTCCCTCCAGTCGGAGGCGAGGCTGCATaGTCCAGCGGTGGGTGCAGG | + |
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Preference number: 2 (lower is better) Translates to: SGKGASASWAVAVGVPPVGGEAA*SSGGCR Trigger: CCTGCACCCACCGCTGGACCATGCAGCCTCGCCTCC...GACTGGAGGGACCCCAACAGCCACCGCCCAGGACGCTGAGGCTCCCTTGCCTGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| 3UTR-3UTR GCA 90 bp | ACCCAGCCTTGGCTCTGGGCTGCCATGTCCCCACGGGGGCAGGAGAGAGGCACATGGTCCAGCGGTGGGTaGAGGTGGCAACAGGTCGGC | + |
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Preference number: 2 (lower is better) Translates to: TQPWLWAAMSPRGQERGTWSSGG*RWQQVG Trigger: GCCGACCTGTTGCCACCTGCACCCACCGCTGGACCA...TGTGCCTCTCTCCTGCCCCCGTGGGGACATGGCAGCCCAGAGCCAAGGCTGGGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| 3UTR-3UTR CCA 90 bp | ACCCAGCCTTGGCTCTGGGCTGCCATGTCCCCACGGGGGCAGGAGAGAGGCACACAGGGGAATGAGCGGTaGAGCAGGGGGTTGCTGGGC | + |
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Preference number: 2 (lower is better) Translates to: TQPWLWAAMSPRGQERGTQGNER*SRGLLG Trigger: GCCCAGCAACCCCCTGCTCCACCGCTCATTCCCCTG...TGTGCCTCTCTCCTGCCCCCGTGGGGACATGGCAGCCCAGAGCCAAGGCTGGGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| 3UTR-3UTR CCA 90 bp | CCTCCAGTCTTCACCTGGGACCCTCGGCCAGGCTGGGACAGCATCCAGGAGGCGCCTGTCCTTCCCTCATaGCTGCTGGAAGGGCCGCCT | + |
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Preference number: 2 (lower is better) Translates to: PPVFTWDPRPGWDSIQEAPVLPS*LLEGPP Trigger: AGGCGGCCCTTCCAGCAGCCATGAGGGAAGGACAGG...CGCCTCCTGGATGCTGTCCCAGCCTGGCCGAGGGTCCCAGGTGAAGACTGGAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| 3UTR-3UTR TCA 90 bp | GAGAAGGTGTTCCCAGAAAGGTTCCTTGGGTCACCTGCCCACCCAGCCTTGGCTCGGGTTGGCACTGGGTaGGACCAGCCCCGGGGCCAG | + |
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Preference number: 2 (lower is better) Translates to: EKVFPERFLGSPAHPALARVGTG*DQPRGQ Trigger: CTGGCCCCGGGGCTGGTCTCACCCAGTGCCAACCCG...AGCCAAGGCTGGGTGGGCAGGTGACCCAAGGAACCTTTCTGGGAACACCTTCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| 3UTR-3UTR CCA 90 bp | TTCCCAGCCCGGCGAGAAGGTGTTCCCAGAAAGGTTCCTTGGGTCACCTGCCCATTCCCTCATGGCTGCTaGAAGGGCCGCCTCCCTGGC | + |
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Preference number: 2 (lower is better) Translates to: FPARREGVPRKVPWVTCPFPHGC*KGRLPG Trigger: GCCAGGGAGGCGGCCCTTCCAGCAGCCATGAGGGAA...TGGGCAGGTGACCCAAGGAACCTTTCTGGGAACACCTTCTCGCCGGGCTGGGAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| 3UTR-3UTR CCA 90 bp | ATGTCCCCACGGGGGCAGGAGAGAGGCACAAGTCACAGTCAGGCAAGGGAGCCTAAGGAGCTCTCGGGTTaGCACTGGGTGAGACCAGCC | + |
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Preference number: 2 (lower is better) Translates to: MSPRGQERGTSHSQAREPKELSG*HWVRPA Trigger: GGCTGGTCTCACCCAGTGCCAACCCGAGAGCTCCTT...AGGCTCCCTTGCCTGACTGTGACTTGTGCCTCTCTCCTGCCCCCGTGGGGACAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| 3UTR-3UTR GCA 90 bp | GAGAAGGTGTTCCCAGAAAGGTTCCTTGGGTCACCTGCCCACCCAGCCTTGGCTTCCTTCCCTCATGGCTaGTGGAAGGGCCGCCTCCCT | + |
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Preference number: 2 (lower is better) Translates to: EKVFPERFLGSPAHPALASFPHG*WKGRLP Trigger: AGGGAGGCGGCCCTTCCAGCAGCCATGAGGGAAGGA...AGCCAAGGCTGGGTGGGCAGGTGACCCAAGGAACCTTTCTGGGAACACCTTCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| 3UTR GCA 72 bp | CTCGGCCAGGCTGGGACAGCATCCAGGAGGCGAGGCTaGATGGTCCAGCGGTGGGTGCAGGTGGCAACAGGT | + |
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Preference number: 3 (lower is better) Translates to: LGQAGTASRRRG*MVQRWVQVATG Trigger: ACCTGTTGCCACCTGCACCCACCGCTGGACCATGCAGCCTCGCCTCCTGGATGCTGTCCCAGCCTGGCCGAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| 3UTR CCA 72 bp | ACAGCATCCAGGAGGCGAGGCTGCATGGTCCAGCGGTaGGTGCAGGTGGCAACAGGTCGGCGGGCTGTGCAG | + |
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Preference number: 3 (lower is better) Translates to: TASRRRGCMVQR*VQVATGRRAVQ Trigger: CTGCACAGCCCGCCGACCTGTTGCCACCTGCACCCACCGCTGGACCATGCAGCCTCGCCTCCTGGATGCTGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| 3UTR CCA 72 bp | GGAGGCGAGGCTGCATGGTCCAGCGGTGGGTGCAGGTaGCAACAGGTCGGCGGGCTGTGCAGGTTCCAAAAG | + |
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Preference number: 3 (lower is better) Translates to: GGEAAWSSGGCR*QQVGGLCRFQK Trigger: CTTTTGGAACCTGCACAGCCCGCCGACCTGTTGCCACCTGCACCCACCGCTGGACCATGCAGCCTCGCCTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| 3UTR CCA 72 bp | CACAGTCAGGCAAGGGAGCCTCAGCGTCCTGGGCGGTaGCTGTTGGGGTCCCTCCAGTCTTCACCTGGGACC | + |
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Preference number: 3 (lower is better) Translates to: HSQAREPQRPGR*LLGSLQSSPGT Trigger: GGTCCCAGGTGAAGACTGGAGGGACCCCAACAGCCACCGCCCAGGACGCTGAGGCTCCCTTGCCTGACTGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| 3UTR-3UTR CAA 90 bp | GTCCCCACGGGGGCAGGAGAGAGGCACAAGTCACAGTCAGGCAAGGGAGCCTCACCTGGGCGGTGGCTGTaGGGGTCCCTCCAGTCTTCA | + |
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Preference number: 3 (lower is better) Translates to: VPTGAGERHKSQSGKGASPGRWL*GSLQSS Trigger: TGAAGACTGGAGGGACCCCAACAGCCACCGCCCAGG...TGAGGCTCCCTTGCCTGACTGTGACTTGTGCCTCTCTCCTGCCCCCGTGGGGAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| 3UTR GCA 72 bp | AGCGGTGGGTGCAGGTGGCAACAGGTCGGCGGGCTGTaGAGGTTCCAAAAGGAGCTCTCGGGTTGGCACTGG | + |
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Preference number: 3 (lower is better) Translates to: SGGCRWQQVGGL*RFQKELSGWHW Trigger: CCAGTGCCAACCCGAGAGCTCCTTTTGGAACCTGCACAGCCCGCCGACCTGTTGCCACCTGCACCCACCGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| 3UTR-3UTR CAA 90 bp | GCCCGGCGAGAAGGTGTTCCCAGAAAGGTTCCTTGGGTCACCTGCCCACCCAGCAAAGGAGCTCTCGGGTaGGCACTGGGTGAGACCAGC | + |
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Preference number: 3 (lower is better) Translates to: ARREGVPRKVPWVTCPPSKGALG*ALGETS Trigger: GCTGGTCTCACCCAGTGCCAACCCGAGAGCTCCTTT...GCTGGGTGGGCAGGTGACCCAAGGAACCTTTCTGGGAACACCTTCTCGCCGGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| CDS-3UTR TCA 90 bp | TCAGGCAAGGGAGCCTCAGCGTCCTGGGCGGTGGCTGTTGGGGTCCCTCCAGTCCGGGTTGGCACTGGGTaGGACCAGCCCCGGGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: SGKGASASWAVAVGVPPVRVGTG*DQPRGQ Trigger: CTGGCCCCGGGGCTGGTCTCACCCAGTGCCAACCCG...GACTGGAGGGACCCCAACAGCCACCGCCCAGGACGCTGAGGCTCCCTTGCCTGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| CDS-3UTR GCA 90 bp | GTCCCCACGGGGGCAGGAGAGAGGCACAAGTCACAGTCAGGCAAGGGAGCCTCAGGCGACAACGTGACCTaGGCGGGGCGCAGCGGCGAG | + |
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Preference number: 4 (lower is better) Translates to: VPTGAGERHKSQSGKGASGDNVT*AGRSGE Trigger: CTCGCCGCTGCGCCCCGCGCAGGTCACGTTGTCGCC...TGAGGCTCCCTTGCCTGACTGTGACTTGTGCCTCTCTCCTGCCCCCGTGGGGAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| 3UTR CAA 72 bp | CAGGCAAGGGAGCCTCAGCGTCCTGGGCGGTGGCTGTaGGGGTCCCTCCAGTCTTCACCTGGGACCCTCGGC | + |
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Preference number: 4 (lower is better) Translates to: QAREPQRPGRWL*GSLQSSPGTLG Trigger: GCCGAGGGTCCCAGGTGAAGACTGGAGGGACCCCAACAGCCACCGCCCAGGACGCTGAGGCTCCCTTGCCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| CDS-3UTR GCA 90 bp | GCCCGGCGAGAAGGTGTTCCCAGAAAGGTTCCTTGGGTCACCTGCCCACCCAGCGCGGACGCGTGTGCGTaGTGTTGTGTGGCGCGCCCG | + |
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Preference number: 4 (lower is better) Translates to: ARREGVPRKVPWVTCPPSADACA*CCVARP Trigger: CGGGCGCGCCACACAACAGCACGCACACGCGTCCGC...GCTGGGTGGGCAGGTGACCCAAGGAACCTTTCTGGGAACACCTTCTCGCCGGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| CDS-3UTR CCA 90 bp | GGTCGGCGGGCTGTGCAGGTTCCAAAAGGAGCTCTCGGGTTGGCACTGGGTGAGGTGCGTGCTGTTGTGTaGCGCGCCCGGCTGGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: GRRAVQVPKGALGLALGEVRAVV*RARLAP Trigger: GGGAGCCAGCCGGGCGCGCCACACAACAGCACGCAC...CTCACCCAGTGCCAACCCGAGAGCTCCTTTTGGAACCTGCACAGCCCGCCGACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| CDS-3UTR CCA 90 bp | CCTTGGCTCTGGGCTGCCATGTCCCCACGGGGGCAGGAGAGAGGCACAAGTCACGGGGTTGCTGGGCACTaGGGTGGGCCCCATCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: PWLWAAMSPRGQERGTSHGVAGH*GGPHLL Trigger: CAGGAGATGGGGCCCACCCCAGTGCCCAGCAACCCC...GTGACTTGTGCCTCTCTCCTGCCCCCGTGGGGACATGGCAGCCCAGAGCCAAGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| CDS-3UTR CCA 90 bp | TCCCTCCAGTCTTCACCTGGGACCCTCGGCCAGGCTGGGACAGCATCCAGGAGGGGAGGCGAGGCTGCATaGTCCAGCGGTGGGTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: SLQSSPGTLGQAGTASRRGGEAA*SSGGCR Trigger: CCTGCACCCACCGCTGGACCATGCAGCCTCGCCTCC...CCTCCTGGATGCTGTCCCAGCCTGGCCGAGGGTCCCAGGTGAAGACTGGAGGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| CDS-3UTR CCA 90 bp | GGCTCTGGGCTGCCATGTCCCCACGGGGGCAGGAGAGAGGCACAAGTCACAGTCCAGCGTCCTGGGCGGTaGCTGTTGGGGTCCCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: GSGLPCPHGGRREAQVTVQRPGR*LLGSLQ Trigger: CTGGAGGGACCCCAACAGCCACCGCCCAGGACGCTG...GACTGTGACTTGTGCCTCTCTCCTGCCCCCGTGGGGACATGGCAGCCCAGAGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| CDS-3UTR CCA 90 bp | TCCCTCCAGTCTTCACCTGGGACCCTCGGCCAGGCTGGGACAGCATCCAGGAGGGGAGCCTCAGCGTCCTaGGCGGTGGCTGTTGGGGTC | + |
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Preference number: 4 (lower is better) Translates to: SLQSSPGTLGQAGTASRRGASAS*AVAVGV Trigger: GACCCCAACAGCCACCGCCCAGGACGCTGAGGCTCC...CCTCCTGGATGCTGTCCCAGCCTGGCCGAGGGTCCCAGGTGAAGACTGGAGGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| CDS-3UTR GCA 90 bp | GTGGCAACAGGTCGGCGGGCTGTGCAGGTTCCAAAAGGAGCTCTCGGGTTGGCACCCGGCGGACGCGTGTaGGTGCTGTTGTGTGGCGCG | + |
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Preference number: 4 (lower is better) Translates to: VATGRRAVQVPKGALGLAPGGRV*VLLCGA Trigger: CGCGCCACACAACAGCACGCACACGCGTCCGCCGGG...TGCCAACCCGAGAGCTCCTTTTGGAACCTGCACAGCCCGCCGACCTGTTGCCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| CDS-3UTR GCA 90 bp | CCTTGGCTCTGGGCTGCCATGTCCCCACGGGGGCAGGAGAGAGGCACAAGTCACTCCAGGAGGCGAGGCTaGATGGTCCAGCGGTGGGTG | + |
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Preference number: 4 (lower is better) Translates to: PWLWAAMSPRGQERGTSHSRRRG*MVQRWV Trigger: CACCCACCGCTGGACCATGCAGCCTCGCCTCCTGGA...GTGACTTGTGCCTCTCTCCTGCCCCCGTGGGGACATGGCAGCCCAGAGCCAAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| CDS-3UTR CCA 90 bp | CGGCGAGAAGGTGTTCCCAGAAAGGTTCCTTGGGTCACCTGCCCACCCAGCCTTTGTGGCGCGCCCGGCTaGCTCCCGTTCGTCACGGCC | + |
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Preference number: 4 (lower is better) Translates to: RREGVPRKVPWVTCPPSLCGAPG*LPFVTA Trigger: GGCCGTGACGAACGGGAGCCAGCCGGGCGCGCCACA...AAGGCTGGGTGGGCAGGTGACCCAAGGAACCTTTCTGGGAACACCTTCTCGCCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| CDS-3UTR CCA 90 bp | TCCCTCCAGTCTTCACCTGGGACCCTCGGCCAGGCTGGGACAGCATCCAGGAGGTTCCCTCATGGCTGCTaGAAGGGCCGCCTCCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: SLQSSPGTLGQAGTASRRFPHGC*KGRLPG Trigger: GCCAGGGAGGCGGCCCTTCCAGCAGCCATGAGGGAA...CCTCCTGGATGCTGTCCCAGCCTGGCCGAGGGTCCCAGGTGAAGACTGGAGGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| CDS-3UTR CCA 90 bp | ACCCAGCCTTGGCTCTGGGCTGCCATGTCCCCACGGGGGCAGGAGAGAGGCACACCTGTCCTTCCCTCATaGCTGCTGGAAGGGCCGCCT | + |
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Preference number: 4 (lower is better) Translates to: TQPWLWAAMSPRGQERGTPVLPS*LLEGPP Trigger: AGGCGGCCCTTCCAGCAGCCATGAGGGAAGGACAGG...TGTGCCTCTCTCCTGCCCCCGTGGGGACATGGCAGCCCAGAGCCAAGGCTGGGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| CDS-3UTR CCA 90 bp | ATGGTCCAGCGGTGGGTGCAGGTGGCAACAGGTCGGCGGGCTGTGCAGGTTCCACAGGGGAATGAGCGGTaGAGCAGGGGGTTGCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: MVQRWVQVATGRRAVQVPQGNER*SRGLLG Trigger: GCCCAGCAACCCCCTGCTCCACCGCTCATTCCCCTG...TGGAACCTGCACAGCCCGCCGACCTGTTGCCACCTGCACCCACCGCTGGACCAT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| CDS-3UTR CCA 90 bp | GGGCTGCCATGTCCCCACGGGGGCAGGAGAGAGGCACAAGTCACAGTCAGGCAAAGCGGTGGGTGCAGGTaGCAACAGGTCGGCGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: GLPCPHGGRREAQVTVRQSGGCR*QQVGGL Trigger: CAGCCCGCCGACCTGTTGCCACCTGCACCCACCGCT...TTGCCTGACTGTGACTTGTGCCTCTCTCCTGCCCCCGTGGGGACATGGCAGCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| CDS-3UTR CCA 90 bp | GCTCTGGGCTGCCATGTCCCCACGGGGGCAGGAGAGAGGCACAAGTCACAGTCAGACCCTCGGCCAGGCTaGGACAGCATCCAGGAGGCG | + |
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Preference number: 4 (lower is better) Translates to: ALGCHVPTGAGERHKSQSDPRPG*DSIQEA Trigger: CGCCTCCTGGATGCTGTCCCAGCCTGGCCGAGGGTC...TGACTGTGACTTGTGCCTCTCTCCTGCCCCCGTGGGGACATGGCAGCCCAGAGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| CDS-3UTR GCA 90 bp | GGGCTGCCATGTCCCCACGGGGGCAGGAGAGAGGCACAAGTCACAGTCAGGCAATGGTCCAGCGGTGGGTaGAGGTGGCAACAGGTCGGC | + |
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Preference number: 4 (lower is better) Translates to: GLPCPHGGRREAQVTVRQWSSGG*RWQQVG Trigger: GCCGACCTGTTGCCACCTGCACCCACCGCTGGACCA...TTGCCTGACTGTGACTTGTGCCTCTCTCCTGCCCCCGTGGGGACATGGCAGCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| CDS-3UTR CCA 90 bp | TCCCTCCAGTCTTCACCTGGGACCCTCGGCCAGGCTGGGACAGCATCCAGGAGGTGGGGTCCTCAGTGTTaGCGAGGAGGCCGTATCGCC | + |
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Preference number: 4 (lower is better) Translates to: SLQSSPGTLGQAGTASRRWGPQC*RGGRIA Trigger: GGCGATACGGCCTCCTCGCCAACACTGAGGACCCCA...CCTCCTGGATGCTGTCCCAGCCTGGCCGAGGGTCCCAGGTGAAGACTGGAGGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| CDS-3UTR TCA 90 bp | CGGCGAGAAGGTGTTCCCAGAAAGGTTCCTTGGGTCACCTGCCCACCCAGCCTTGGGCCAGCAGGGGAATaGGCGGTGGAGCAGGGGGTT | + |
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Preference number: 4 (lower is better) Translates to: RREGVPRKVPWVTCPPSLGPAGE*AVEQGV Trigger: AACCCCCTGCTCCACCGCTCATTCCCCTGCTGGCCC...AAGGCTGGGTGGGCAGGTGACCCAAGGAACCTTTCTGGGAACACCTTCTCGCCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| CDS-3UTR GCA 90 bp | TCTGGGCTGCCATGTCCCCACGGGGGCAGGAGAGAGGCACAAGTCACAGTCAGGTCCTTCCCTCATGGCTaGTGGAAGGGCCGCCTCCCT | + |
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Preference number: 4 (lower is better) Translates to: SGLPCPHGGRREAQVTVRSFPHG*WKGRLP Trigger: AGGGAGGCGGCCCTTCCAGCAGCCATGAGGGAAGGA...CCTGACTGTGACTTGTGCCTCTCTCCTGCCCCCGTGGGGACATGGCAGCCCAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| CDS-3UTR GCA 90 bp | GGTCCAGCGGTGGGTGCAGGTGGCAACAGGTCGGCGGGCTGTGCAGGTTCCAAACAGGTCGGCGGGCTGTaGAGGTTCCAAAAGGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: GPAVGAGGNRSAGCAGSKQVGGL*RFQKEL Trigger: GAGCTCCTTTTGGAACCTGCACAGCCCGCCGACCTG...TTTGGAACCTGCACAGCCCGCCGACCTGTTGCCACCTGCACCCACCGCTGGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| CDS-3UTR CCA 90 bp | TTCCCAGCCCGGCGAGAAGGTGTTCCCAGAAAGGTTCCTTGGGTCACCTGCCCACTCTCGGGTTGGCACTaGGTGAGACCAGCCCCGGGG | + |
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Preference number: 4 (lower is better) Translates to: FPARREGVPRKVPWVTCPLSGWH*VRPAPG Trigger: CCCCGGGGCTGGTCTCACCCAGTGCCAACCCGAGAG...TGGGCAGGTGACCCAAGGAACCTTTCTGGGAACACCTTCTCGCCGGGCTGGGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| CDS-3UTR CCA 90 bp | TCCCTCCAGTCTTCACCTGGGACCCTCGGCCAGGCTGGGACAGCATCCAGGAGGTGCATGGTCCAGCGGTaGGTGCAGGTGGCAACAGGT | + |
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Preference number: 4 (lower is better) Translates to: SLQSSPGTLGQAGTASRRCMVQR*VQVATG Trigger: ACCTGTTGCCACCTGCACCCACCGCTGGACCATGCA...CCTCCTGGATGCTGTCCCAGCCTGGCCGAGGGTCCCAGGTGAAGACTGGAGGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| CDS-3UTR TCA 90 bp | ACCCAGCCTTGGCTCTGGGCTGCCATGTCCCCACGGGGGCAGGAGAGAGGCACACCGTATCGCCTCCGCTaGGGCTTCTTCAACCTAAAC | + |
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Preference number: 4 (lower is better) Translates to: TQPWLWAAMSPRGQERGTPYRLR*GFFNLN Trigger: GTTTAGGTTGAAGAAGCCTCAGCGGAGGCGATACGG...TGTGCCTCTCTCCTGCCCCCGTGGGGACATGGCAGCCCAGAGCCAAGGCTGGGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| CDS-3UTR CCA 90 bp | GGTCGGCGGGCTGTGCAGGTTCCAAAAGGAGCTCTCGGGTTGGCACTGGGTGAGAAGGAGCTCTCGGGTTaGCACTGGGTGAGACCAGCC | + |
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Preference number: 4 (lower is better) Translates to: GRRAVQVPKGALGLALGEKELSG*HWVRPA Trigger: GGCTGGTCTCACCCAGTGCCAACCCGAGAGCTCCTT...CTCACCCAGTGCCAACCCGAGAGCTCCTTTTGGAACCTGCACAGCCCGCCGACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| CDS-3UTR CCA 90 bp | TTCCCAGCCCGGCGAGAAGGTGTTCCCAGAAAGGTTCCTTGGGTCACCTGCCCAGCGAGGCCATCTCCGTaGGGTCCTCAGTGTTGGCGA | + |
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Preference number: 4 (lower is better) Translates to: FPARREGVPRKVPWVTCPARPSP*GPQCWR Trigger: TCGCCAACACTGAGGACCCCACGGAGATGGCCTCGC...TGGGCAGGTGACCCAAGGAACCTTTCTGGGAACACCTTCTCGCCGGGCTGGGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| CDS-3UTR CCA 90 bp | GTCCCCACGGGGGCAGGAGAGAGGCACAAGTCACAGTCAGGCAAGGGAGCCTCAGAAGGGCCGCCTCCCTaGCTCAGCATCATCTCAGAT | + |
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Preference number: 4 (lower is better) Translates to: VPTGAGERHKSQSGKGASEGPPP*LSIISD Trigger: ATCTGAGATGATGCTGAGCCAGGGAGGCGGCCCTTC...TGAGGCTCCCTTGCCTGACTGTGACTTGTGCCTCTCTCCTGCCCCCGTGGGGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| CDS CCA 90 bp | CGCCGAGCCCGACGCCCCCGGCGGACGCGTGTGCGTGCTGTTGTGTaGCGCGCCCGGCTGGCTCCCGTTCGTCACGGCCGGCGGCGGCGA | + |
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Preference number: 5 (lower is better) Translates to: RRARRPRRTRVRAVV*RARLAPVRHGRRRR Trigger: TCGCCGCCGCCGGCCGTGACGAACGGGAGCCAGCCGGGCGCGCCACACAACAGCACGCACACGCGTCCGCCGGGGGCGTCGGGCTCGGCG 80% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| CDS TCA 90 bp | CGCCCGGCTGGCTCCCGTTCGTCACGGCCGGCGGCGGCGACAACGTaGCCTGCGCGGGGCGCAGCGGCGAGGCCTCTTCGGCACCGCACG | + |
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Preference number: 5 (lower is better) Translates to: RPAGSRSSRPAAATT*PARGAAARPLRHRT Trigger: CGTGCGGTGCCGAAGAGGCCTCGCCGCTGCGCCCCGCGCAGGTCACGTTGTCGCCGCCGCCGGCCGTGACGAACGGGAGCCAGCCGGGCG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| CDS GCA 90 bp | GGCTGGCTCCCGTTCGTCACGGCCGGCGGCGGCGACAACGTGACCTaGGCGGGGCGCAGCGGCGAGGCCTCTTCGGCACCGCACGGCAGC | + |
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Preference number: 5 (lower is better) Translates to: GWLPFVTAGGGDNVT*AGRSGEASSAPHGS Trigger: GCTGCCGTGCGGTGCCGAAGAGGCCTCGCCGCTGCGCCCCGCGCAGGTCACGTTGTCGCCGCCGCCGGCCGTGACGAACGGGAGCCAGCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| CDS GCA 90 bp | AGCGCGTCAGCGCCGAGCCCGACGCCCCCGGCGGACGCGTGTGCGTaGTGTTGTGTGGCGCGCCCGGCTGGCTCCCGTTCGTCACGGCCG | + |
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Preference number: 5 (lower is better) Translates to: SASAPSPTPPADACA*CCVARPAGSRSSRP Trigger: CGGCCGTGACGAACGGGAGCCAGCCGGGCGCGCCACACAACAGCACGCACACGCGTCCGCCGGGGGCGTCGGGCTCGGCGCTGACGCGCT 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| CDS CCA 90 bp | GCCCCCGGCGGACGCGTGTGCGTGCTGTTGTGTGGCGCGCCCGGCTaGCTCCCGTTCGTCACGGCCGGCGGCGGCGACAACGTGACCTGC | + |
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Preference number: 5 (lower is better) Translates to: APGGRVCVLLCGAPG*LPFVTAGGGDNVTC Trigger: GCAGGTCACGTTGTCGCCGCCGCCGGCCGTGACGAACGGGAGCCAGCCGGGCGCGCCACACAACAGCACGCACACGCGTCCGCCGGGGGC 77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| CDS GCA 90 bp | AAGGAGCGCGTCAGCGCCGAGCCCGACGCCCCCGGCGGACGCGTGTaGGTGCTGTTGTGTGGCGCGCCCGGCTGGCTCCCGTTCGTCACG | + |
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Preference number: 5 (lower is better) Translates to: KERVSAEPDAPGGRV*VLLCGAPGWLPFVT Trigger: CGTGACGAACGGGAGCCAGCCGGGCGCGCCACACAACAGCACGCACACGCGTCCGCCGGGGGCGTCGGGCTCGGCGCTGACGCGCTCCTT 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| CDS GCA 90 bp | GGCTGCCTACAGCTGGAGACCCCCGCGAGGGTCTGGGGACGCAGCTaGACCTCCCGGGCTGTGGGAGCACCCAAGGCGGGCACGTGGCCG | + |
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Preference number: 5 (lower is better) Translates to: GCLQLETPARVWGRS*TSRAVGAPKAGTWP Trigger: CGGCCACGTGCCCGCCTTGGGTGCTCCCACAGCCCGGGAGGTGCAGCTGCGTCCCCAGACCCTCGCGGGGGTCTCCAGCTGTAGGCAGCC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000485191.5 ENST00000590269.2 |
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| CDS CCA 90 bp | AGACCCCCGCGAGGGTCTGGGGACGCAGCTGCACCTCCCGGGCTGTaGGAGCACCCAAGGCGGGCACGTGGCCGACCCTGGCGACGAACC | + |
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Preference number: 5 (lower is better) Translates to: RPPRGSGDAAAPPGL*EHPRRARGRPWRRT Trigger: GGTTCGTCGCCAGGGTCGGCCACGTGCCCGCCTTGGGTGCTCCCACAGCCCGGGAGGTGCAGCTGCGTCCCCAGACCCTCGCGGGGGTCT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000485191.5 ENST00000590269.2 |
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| CDS CCA 90 bp | CTCCTGCCCAGGGGCTGCCTACAGCTGGAGACCCCCGCGAGGGTCTaGGGACGCAGCTGCACCTCCCGGGCTGTGGGAGCACCCAAGGCG | + |
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Preference number: 5 (lower is better) Translates to: LLPRGCLQLETPARV*GRSCTSRAVGAPKA Trigger: CGCCTTGGGTGCTCCCACAGCCCGGGAGGTGCAGCTGCGTCCCCAGACCCTCGCGGGGGTCTCCAGCTGTAGGCAGCCCCTGGGCAGGAG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000485191.5 ENST00000590269.2 |
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| CDS-3UTR CAA 90 bp | GGTCCAGCGGTGGGTGCAGGTGGCAACAGGTCGGCGGGCTGTGCAGGTTCCAAACGCGTGTGCGTGCTGTaGTGTGGCGCGCCCGGCTGG | + |
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Preference number: 5 (lower is better) Translates to: GPAVGAGGNRSAGCAGSKRVCVL*CGAPGW Trigger: CCAGCCGGGCGCGCCACACAACAGCACGCACACGCG...TTTGGAACCTGCACAGCCCGCCGACCTGTTGCCACCTGCACCCACCGCTGGACC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| CDS GCA 90 bp | GGCAGGGAGGGCGCGGCATACAGGCAGGGGAGAGCGCGCAGCAGGTaGTTCCACAGGAAGAGGTGTGGAGCACAGGGGAGGCTCTGCACA | + |
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Preference number: 5 (lower is better) Translates to: GREGAAYRQGRARSR*FHRKRCGAQGRLCT Trigger: TGTGCAGAGCCTCCCCTGTGCTCCACACCTCTTCCTGTGGAAGCACCTGCTGCGCGCTCTCCCCTGCCTGTATGCCGCGCCCTCCCTGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000485191.5 |
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| CDS CCA 90 bp | CGCAGCTGCACCTCCCGGGCTGTGGGAGCACCCAAGGCGGGCACGTaGCCGACCCTGGCGACGAACCAGCTTCAGTGGGTAGAAGCAGAA | + |
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Preference number: 5 (lower is better) Translates to: RSCTSRAVGAPKAGT*PTLATNQLQWVEAE Trigger: TTCTGCTTCTACCCACTGAAGCTGGTTCGTCGCCAGGGTCGGCCACGTGCCCGCCTTGGGTGCTCCCACAGCCCGGGAGGTGCAGCTGCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000485191.5 ENST00000590269.2 |
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| CDS-3UTR CAA 90 bp | GGTCCAGCGGTGGGTGCAGGTGGCAACAGGTCGGCGGGCTGTGCAGGTTCCAAACCTGGGCGGTGGCTGTaGGGGTCCCTCCAGTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: GPAVGAGGNRSAGCAGSKPGRWL*GSLQSS Trigger: TGAAGACTGGAGGGACCCCAACAGCCACCGCCCAGG...TTTGGAACCTGCACAGCCCGCCGACCTGTTGCCACCTGCACCCACCGCTGGACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| CDS GCA 90 bp | GCTGGGCACTGGGGTGGGCCCCATCTCCTGTCCTTCCCTCATGGCTaGTGGAAGGGCCGCCTCCCTGGCTCAGCATCATCTCAGATTCCG | + |
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Preference number: 5 (lower is better) Translates to: AGHWGGPHLLSFPHG*WKGRLPGSASSQIP Trigger: CGGAATCTGAGATGATGCTGAGCCAGGGAGGCGGCCCTTCCAGCAGCCATGAGGGAAGGACAGGAGATGGGGCCCACCCCAGTGCCCAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000409293.6 ENST00000469144.5 ENST00000485191.5 |
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| CDS CCA 90 bp | GGGCACTGGGGTGGGCCCCATCTCCTGTCCTTCCCTCATGGCTGCTaGAAGGGCCGCCTCCCTGGCTCAGCATCATCTCAGATTCCGGGA | + |
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Preference number: 5 (lower is better) Translates to: GHWGGPHLLSFPHGC*KGRLPGSASSQIPG Trigger: TCCCGGAATCTGAGATGATGCTGAGCCAGGGAGGCGGCCCTTCCAGCAGCCATGAGGGAAGGACAGGAGATGGGGCCCACCCCAGTGCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000409293.6 ENST00000469144.5 ENST00000485191.5 |
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| CDS CCA 90 bp | CCTCGTCGCTGTCCAGCGAGGCCATCTCCGTGGGGTCCTCAGTGTTaGCGAGGAGGCCGTATCGCCTCCGCTGAGGCTTCTTCAACCTGG | + |
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Preference number: 5 (lower is better) Translates to: PRRCPARPSPWGPQC*RGGRIASAEASSTW Trigger: CCAGGTTGAAGAAGCCTCAGCGGAGGCGATACGGCCTCCTCGCCAACACTGAGGACCCCACGGAGATGGCCTCGCTGGACAGCGACGAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000469144.5 ENST00000485191.5 |
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| CDS CCA 90 bp | CCGGGAGAAGCAGCCACACTGGGTAGTCAGGAGCCCAGAGGAGACTaGAGCCACAGGCCAGGGAAGCCGGGGTGGCCTGAACACGCAGAA | + |
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Preference number: 5 (lower is better) Translates to: PGEAATLGSQEPRGD*SHRPGKPGWPEHAE Trigger: TTCTGCGTGTTCAGGCCACCCCGGCTTCCCTGGCCTGTGGCTCCAGTCTCCTCTGGGCTCCTGACTACCCAGTGTGGCTGCTTCTCCCGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000485191.5 ENST00000590269.2 |
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| CDS-3UTR CAA 90 bp | GGTCGGCGGGCTGTGCAGGTTCCAAAAGGAGCTCTCGGGTTGGCACTGGGTGAGGTGGGGTCCTCAGTGTaGGCGAGGAGGCCGTATCGC | + |
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Preference number: 5 (lower is better) Translates to: GRRAVQVPKGALGLALGEVGSSV*ARRPYR Trigger: GCGATACGGCCTCCTCGCCAACACTGAGGACCCCAC...CTCACCCAGTGCCAACCCGAGAGCTCCTTTTGGAACCTGCACAGCCCGCCGACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| CDS-3UTR CAA 90 bp | GGGTCCCTCCAGTCTTCACCTGGGACCCTCGGCCAGGCTGGGACAGCATCCAGGAAAGGAGCTCTCGGGTaGGCACTGGGTGAGACCAGC | + |
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Preference number: 5 (lower is better) Translates to: GSLQSSPGTLGQAGTASRKGALG*ALGETS Trigger: GCTGGTCTCACCCAGTGCCAACCCGAGAGCTCCTTT...CCTGGATGCTGTCCCAGCCTGGCCGAGGGTCCCAGGTGAAGACTGGAGGGACCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| CDS GCA 90 bp | GCTGGGCACTGGGGTGGGCCCCATCTCCTGTCCTTCCCTCATGGCTaGTGGAAGGGCCGCCTCCCTGGCTCAGCATCTTTAATCCCAGCT | + |
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Preference number: 5 (lower is better) Translates to: AGHWGGPHLLSFPHG*WKGRLPGSASLIPA Trigger: AGCTGGGATTAAAGATGCTGAGCCAGGGAGGCGGCCCTTCCAGCAGCCATGAGGGAAGGACAGGAGATGGGGCCCACCCCAGTGCCCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585716.3 |
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| CDS CCA 90 bp | ACTCAAACACCGTCTCCTCGTCGCTGTCCAGCGAGGCCATCTCCGTaGGGTCCTCAGTGTTGGCGAGGAGGCCGTATCGCCTCCGCTGAG | + |
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Preference number: 5 (lower is better) Translates to: TQTPSPRRCPARPSP*GPQCWRGGRIASAE Trigger: CTCAGCGGAGGCGATACGGCCTCCTCGCCAACACTGAGGACCCCACGGAGATGGCCTCGCTGGACAGCGACGAGGAGACGGTGTTTGAGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000409293.6 ENST00000469144.5 ENST00000485191.5 ENST00000590269.2 |
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| CDS CCA 90 bp | GGTTGCTGGGCACTGGGGTGGGCCCCATCTCCTGTCCTTCCCTCATaGCTGCTGGAAGGGCCGCCTCCCTGGCTCAGCATCATCTCAGAT | + |
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Preference number: 5 (lower is better) Translates to: GCWALGWAPSPVLPS*LLEGPPPWLSIISD Trigger: ATCTGAGATGATGCTGAGCCAGGGAGGCGGCCCTTCCAGCAGCCATGAGGGAAGGACAGGAGATGGGGCCCACCCCAGTGCCCAGCAACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000409293.6 ENST00000469144.5 ENST00000485191.5 |
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| CDS CCA 90 bp | GGTTGCTGGGCACTGGGGTGGGCCCCATCTCCTGTCCTTCCCTCATaGCTGCTGGAAGGGCCGCCTCCCTGGCTCAGCATCTTTAATCCC | + |
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Preference number: 5 (lower is better) Translates to: GCWALGWAPSPVLPS*LLEGPPPWLSIFNP Trigger: GGGATTAAAGATGCTGAGCCAGGGAGGCGGCCCTTCCAGCAGCCATGAGGGAAGGACAGGAGATGGGGCCCACCCCAGTGCCCAGCAACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585716.3 |
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| CDS-3UTR CAA 90 bp | TCCCTCCAGTCTTCACCTGGGACCCTCGGCCAGGCTGGGACAGCATCCAGGAGGTCCCAGAAAGGTTCCTaGGGTCACCTGCCCACCCAG | + |
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Preference number: 5 (lower is better) Translates to: SLQSSPGTLGQAGTASRRSQKGS*GHLPTQ Trigger: CTGGGTGGGCAGGTGACCCAAGGAACCTTTCTGGGA...CCTCCTGGATGCTGTCCCAGCCTGGCCGAGGGTCCCAGGTGAAGACTGGAGGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| CDS CCA 90 bp | CCTCGTCGCTGTCCAGCGAGGCCATCTCCGTGGGGTCCTCAGTGTTaGCGAGGAGGCCGTATCGCCTCCGCTGAGGCTTCTTCAACATCT | + |
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Preference number: 5 (lower is better) Translates to: PRRCPARPSPWGPQC*RGGRIASAEASSTS Trigger: AGATGTTGAAGAAGCCTCAGCGGAGGCGATACGGCCTCCTCGCCAACACTGAGGACCCCACGGAGATGGCCTCGCTGGACAGCGACGAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590269.2 |
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| CDS CCA 90 bp | GGGCACTGGGGTGGGCCCCATCTCCTGTCCTTCCCTCATGGCTGCTaGAAGGGCCGCCTCCCTGGCTCAGCATCTTTAATCCCAGCTACT | + |
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Preference number: 5 (lower is better) Translates to: GHWGGPHLLSFPHGC*KGRLPGSASLIPAT Trigger: AGTAGCTGGGATTAAAGATGCTGAGCCAGGGAGGCGGCCCTTCCAGCAGCCATGAGGGAAGGACAGGAGATGGGGCCCACCCCAGTGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585716.3 |
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| CDS CCA 90 bp | CCCAAGGCGGGCACGTGGCCGACCCTGGCGACGAACCAGCTTCAGTaGGTAGAAGCAGAAAGGAAAATATCGGGACCCCACGGAAAGGCC | + |
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Preference number: 5 (lower is better) Translates to: PKAGTWPTLATNQLQ*VEAERKISGPHGKA Trigger: GGCCTTTCCGTGGGGTCCCGATATTTTCCTTTCTGCTTCTACCCACTGAAGCTGGTTCGTCGCCAGGGTCGGCCACGTGCCCGCCTTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000485191.5 ENST00000590269.2 |
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| CDS TCA 90 bp | TCCGTGGGGTCCTCAGTGTTGGCGAGGAGGCCGTATCGCCTCCGCTaGGGCTTCTTCAACCTGGAAGTAGGTCCAGGCATAGTCAGTGGC | + |
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Preference number: 5 (lower is better) Translates to: SVGSSVLARRPYRLR*GFFNLEVGPGIVSG Trigger: GCCACTGACTATGCCTGGACCTACTTCCAGGTTGAAGAAGCCTCAGCGGAGGCGATACGGCCTCCTCGCCAACACTGAGGACCCCACGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485191.5 |
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| CDS CCA 90 bp | CCATCTCCTGTCCTTCCCTCATGGCTGCTGGAAGGGCCGCCTCCCTaGCTCAGCATCTTTAATCCCAGCTACTCAGGAGGCTGCGATGGG | + |
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Preference number: 5 (lower is better) Translates to: PSPVLPSWLLEGPPP*LSIFNPSYSGGCDG Trigger: CCCATCGCAGCCTCCTGAGTAGCTGGGATTAAAGATGCTGAGCCAGGGAGGCGGCCCTTCCAGCAGCCATGAGGGAAGGACAGGAGATGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585716.3 |
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| CDS-3UTR CAA 90 bp | TCCCTCCAGTCTTCACCTGGGACCCTCGGCCAGGCTGGGACAGCATCCAGGAGGACATGGCTGCATTTATaGTTCCCAGCCCGGCGAGAA | + |
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Preference number: 5 (lower is better) Translates to: SLQSSPGTLGQAGTASRRTWLHL*FPARRE Trigger: TTCTCGCCGGGCTGGGAACAATAAATGCAGCCATGT...CCTCCTGGATGCTGTCCCAGCCTGGCCGAGGGTCCCAGGTGAAGACTGGAGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| CDS GCA 90 bp | TCCCTCAGGACTCTCATTGCCGTCCTCTACTGGAGCCCCGAGCCCTaGTGCAGACCTCCCTGGTTTTGCTGTGCCTGCTTCTTTCATGTC | + |
|
Preference number: 5 (lower is better) Translates to: SLRTLIAVLYWSPEP*CRPPWFCCACFFHV Trigger: GACATGAAAGAAGCAGGCACAGCAAAACCAGGGAGGTCTGCAGCAGGGCTCGGGGCTCCAGTAGAGGACGGCAATGAGAGTCCTGAGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000485191.5 |
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| CDS GCA 90 bp | CTCAGGACTCTCATTGCCGTCCTCTACTGGAGCCCCGAGCCCTGCTaGAGACCTCCCTGGTTTTGCTGTGCCTGCTTCTTTCATGTCCTA | + |
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Preference number: 5 (lower is better) Translates to: LRTLIAVLYWSPEPC*RPPWFCCACFFHVL Trigger: TAGGACATGAAAGAAGCAGGCACAGCAAAACCAGGGAGGTCTGCAGCAGGGCTCGGGGCTCCAGTAGAGGACGGCAATGAGAGTCCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000485191.5 |
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| CDS TCA 90 bp | GTCACTCCCATTGCACTGATGAAAAGACTGAGGCTCACACAGGGGTaGGACTTTGCCAAAGACAACAGAATGGAAGCCTGTCTCAGGGCC | + |
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Preference number: 5 (lower is better) Translates to: VTPIALMKRLRLTQG*DFAKDNRMEACLRA Trigger: GGCCCTGAGACAGGCTTCCATTCTGTTGTCTTTGGCAAAGTCTCACCCCTGTGTGAGCCTCAGTCTTTTCATCAGTGCAATGGGAGTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000485191.5 |
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| CDS TCA 90 bp | ATCTTTAATCCCAGCTACTCAGGAGGCTGCGATGGGAGAAATGCTTaGACTCCCATTGCACTGATGAAAAGACTGAGGCTCACACAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: IFNPSYSGGCDGRNA*TPIALMKRLRLTQG Trigger: CCCCTGTGTGAGCCTCAGTCTTTTCATCAGTGCAATGGGAGTTCAAGCATTTCTCCCATCGCAGCCTCCTGAGTAGCTGGGATTAAAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585716.3 |
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| CDS CAA 90 bp | GTCAGCGCCGAGCCCGACGCCCCCGGCGGACGCGTGTGCGTGCTGTaGTGTGGCGCGCCCGGCTGGCTCCCGTTCGTCACGGCCGGCGGC | + |
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Preference number: 6 (lower is better) Translates to: VSAEPDAPGGRVCVL*CGAPGWLPFVTAGG Trigger: GCCGCCGGCCGTGACGAACGGGAGCCAGCCGGGCGCGCCACACAACAGCACGCACACGCGTCCGCCGGGGGCGTCGGGCTCGGCGCTGAC 79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| CDS GCA 72 bp | GTCAGCGCCGAGCCCGACGCCCCCGGCGGACGCGTGTaGGTGCTGTTGTGTGGCGCGCCCGGCTGGCTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: VSAEPDAPGGRV*VLLCGAPGWLP Trigger: CGGGAGCCAGCCGGGCGCGCCACACAACAGCACGCACACGCGTCCGCCGGGGGCGTCGGGCTCGGCGCTGAC 79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| CDS TCA 72 bp | GGCTCCCGTTCGTCACGGCCGGCGGCGGCGACAACGTaGCCTGCGCGGGGCGCAGCGGCGAGGCCTCTTCGG | + |
|
Preference number: 6 (lower is better) Translates to: GSRSSRPAAATT*PARGAAARPLR Trigger: CCGAAGAGGCCTCGCCGCTGCGCCCCGCGCAGGTCACGTTGTCGCCGCCGCCGGCCGTGACGAACGGGAGCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| CDS GCA 72 bp | CCGTTCGTCACGGCCGGCGGCGGCGACAACGTGACCTaGGCGGGGCGCAGCGGCGAGGCCTCTTCGGCACCG | + |
|
Preference number: 6 (lower is better) Translates to: PFVTAGGGDNVT*AGRSGEASSAP Trigger: CGGTGCCGAAGAGGCCTCGCCGCTGCGCCCCGCGCAGGTCACGTTGTCGCCGCCGCCGGCCGTGACGAACGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| CDS CCA 72 bp | CGACGCCCCCGGCGGACGCGTGTGCGTGCTGTTGTGTaGCGCGCCCGGCTGGCTCCCGTTCGTCACGGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: RRPRRTRVRAVV*RARLAPVRHGR Trigger: CCGGCCGTGACGAACGGGAGCCAGCCGGGCGCGCCACACAACAGCACGCACACGCGTCCGCCGGGGGCGTCG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| CDS CAA 72 bp | GAGCCCGACGCCCCCGGCGGACGCGTGTGCGTGCTGTaGTGTGGCGCGCCCGGCTGGCTCCCGTTCGTCACG | + |
|
Preference number: 6 (lower is better) Translates to: EPDAPGGRVCVL*CGAPGWLPFVT Trigger: CGTGACGAACGGGAGCCAGCCGGGCGCGCCACACAACAGCACGCACACGCGTCCGCCGGGGGCGTCGGGCTC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| CDS GCA 72 bp | CAGCTGGAGACCCCCGCGAGGGTCTGGGGACGCAGCTaGACCTCCCGGGCTGTGGGAGCACCCAAGGCGGGC | + |
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Preference number: 6 (lower is better) Translates to: QLETPARVWGRS*TSRAVGAPKAG Trigger: GCCCGCCTTGGGTGCTCCCACAGCCCGGGAGGTGCAGCTGCGTCCCCAGACCCTCGCGGGGGTCTCCAGCTG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000485191.5 ENST00000590269.2 |
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| CDS CCA 72 bp | GGACGCGTGTGCGTGCTGTTGTGTGGCGCGCCCGGCTaGCTCCCGTTCGTCACGGCCGGCGGCGGCGACAAC | + |
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Preference number: 6 (lower is better) Translates to: GRVCVLLCGAPG*LPFVTAGGGDN Trigger: GTTGTCGCCGCCGCCGGCCGTGACGAACGGGAGCCAGCCGGGCGCGCCACACAACAGCACGCACACGCGTCC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| CDS CCA 72 bp | CGAGGGTCTGGGGACGCAGCTGCACCTCCCGGGCTGTaGGAGCACCCAAGGCGGGCACGTGGCCGACCCTGG | + |
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Preference number: 6 (lower is better) Translates to: RGSGDAAAPPGL*EHPRRARGRPW Trigger: CCAGGGTCGGCCACGTGCCCGCCTTGGGTGCTCCCACAGCCCGGGAGGTGCAGCTGCGTCCCCAGACCCTCG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000485191.5 ENST00000590269.2 |
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| CDS CCA 72 bp | ACCTCCCGGGCTGTGGGAGCACCCAAGGCGGGCACGTaGCCGACCCTGGCGACGAACCAGCTTCAGTGGGTA | + |
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Preference number: 6 (lower is better) Translates to: TSRAVGAPKAGT*PTLATNQLQWV Trigger: TACCCACTGAAGCTGGTTCGTCGCCAGGGTCGGCCACGTGCCCGCCTTGGGTGCTCCCACAGCCCGGGAGGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000485191.5 ENST00000590269.2 |
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| CDS CCA 72 bp | CCGTCTCCTCGTCGCTGTCCAGCGAGGCCATCTCCGTaGGGTCCTCAGTGTTGGCGAGGAGGCCGTATCGCC | + |
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Preference number: 6 (lower is better) Translates to: PSPRRCPARPSP*GPQCWRGGRIA Trigger: GGCGATACGGCCTCCTCGCCAACACTGAGGACCCCACGGAGATGGCCTCGCTGGACAGCGACGAGGAGACGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000409293.6 ENST00000469144.5 ENST00000485191.5 ENST00000590269.2 |
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| CDS CCA 72 bp | TGTCCAGCGAGGCCATCTCCGTGGGGTCCTCAGTGTTaGCGAGGAGGCCGTATCGCCTCCGCTGAGGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: CPARPSPWGPQC*RGGRIASAEAS Trigger: AGAAGCCTCAGCGGAGGCGATACGGCCTCCTCGCCAACACTGAGGACCCCACGGAGATGGCCTCGCTGGACA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000409293.6 ENST00000469144.5 ENST00000485191.5 ENST00000590269.2 |
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| CDS TCA 72 bp | TCCTCAGTGTTGGCGAGGAGGCCGTATCGCCTCCGCTaGGGCTTCTTCAACCTGGGAAACGGGCAGCGTCAC | + |
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Preference number: 6 (lower is better) Translates to: SSVLARRPYRLR*GFFNLGNGQRH Trigger: GTGACGCTGCCCGTTTCCCAGGTTGAAGAAGCCTCAGCGGAGGCGATACGGCCTCCTCGCCAACACTGAGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469144.5 |
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| CDS CCA 72 bp | GTCCTTCCCTCATGGCTGCTGGAAGGGCCGCCTCCCTaGCTCAGCATCTTTAATCCCAGCTACTCAGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: VLPSWLLEGPPP*LSIFNPSYSGG Trigger: GCCTCCTGAGTAGCTGGGATTAAAGATGCTGAGCCAGGGAGGCGGCCCTTCCAGCAGCCATGAGGGAAGGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585716.3 |
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| CDS TCA 72 bp | TCCTCAGTGTTGGCGAGGAGGCCGTATCGCCTCCGCTaGGGCTTCTTCAACCTAAACGCCCGGATCAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: SSVLARRPYRLR*GFFNLNARIRK Trigger: CTTCCTGATCCGGGCGTTTAGGTTGAAGAAGCCTCAGCGGAGGCGATACGGCCTCCTCGCCAACACTGAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409293.6 |
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| CDS TCA 72 bp | TCCTCAGTGTTGGCGAGGAGGCCGTATCGCCTCCGCTaGGGCTTCTTCAACCTGGAAGTAGGTCCAGGCATA | + |
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Preference number: 6 (lower is better) Translates to: SSVLARRPYRLR*GFFNLEVGPGI Trigger: TATGCCTGGACCTACTTCCAGGTTGAAGAAGCCTCAGCGGAGGCGATACGGCCTCCTCGCCAACACTGAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485191.5 |
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| CDS CAA 90 bp | CGTCCTCTACTGGAGCCCCGAGCCCTGCTGCAGACCTCCCTGGTTTaGCTGTGCCTGCTTCTTTCATGTCCTAATCGCCAAGTGATTACC | + |
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Preference number: 6 (lower is better) Translates to: RPLLEPRALLQTSLV*LCLLLSCPNRQVIT Trigger: GGTAATCACTTGGCGATTAGGACATGAAAGAAGCAGGCACAGCAAAACCAGGGAGGTCTGCAGCAGGGCTCGGGGCTCCAGTAGAGGACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485191.5 |
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| CDS CCA 72 bp | CTCTACTGGAGCCCCGAGCCCTGCTGCAGACCTCCCTaGTTTTGCTGTGCCTGCTTCTTTCATGTCCTAATC | + |
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Preference number: 6 (lower is better) Translates to: LYWSPEPCCRPP*FCCACFFHVLI Trigger: GATTAGGACATGAAAGAAGCAGGCACAGCAAAACCAGGGAGGTCTGCAGCAGGGCTCGGGGCTCCAGTAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000485191.5 |
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| CDS TCA 72 bp | TCCTCAGTGTTGGCGAGGAGGCCGTATCGCCTCCGCTaGGGCTTCTTCAACATCTATAATGCCAGCACTTTG | + |
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Preference number: 6 (lower is better) Translates to: SSVLARRPYRLR*GFFNIYNASTL Trigger: CAAAGTGCTGGCATTATAGATGTTGAAGAAGCCTCAGCGGAGGCGATACGGCCTCCTCGCCAACACTGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590269.2 |
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| CDS GCA 72 bp | GATGAAAAGACTGAGGCTCACACAGGGGTGAGACTTTaGCAAAGACAACAGAATGGAAGCCTGTCTCAGGGC | + |
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Preference number: 6 (lower is better) Translates to: DEKTEAHTGVRL*QRQQNGSLSQG Trigger: GCCCTGAGACAGGCTTCCATTCTGTTGTCTTTGGCAAAGTCTCACCCCTGTGTGAGCCTCAGTCTTTTCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000485191.5 |
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| CDS TCA 72 bp | ATTGCACTGATGAAAAGACTGAGGCTCACACAGGGGTaGGACTTTGCCAAAGACAACAGAATGGAAGCCTGT | + |
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Preference number: 6 (lower is better) Translates to: IALMKRLRLTQG*DFAKDNRMEAC Trigger: ACAGGCTTCCATTCTGTTGTCTTTGGCAAAGTCTCACCCCTGTGTGAGCCTCAGTCTTTTCATCAGTGCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000485191.5 |
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