RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM171B (Homo sapiens)

Ensembl gene IDs: ENSG00000144369

Ensembl transcript IDs: ENST00000304698.10, ENST00000612606.1

Found 196 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CATGGGGTAGTCACCATGGTAGAGGCAACATTTTTGGAGGCAACTTaGGGAGTATATATTTCACTGTTATTCTTAAGAGAGTCAAGGCCA +
Preference number: 1 (lower is better)
Translates to: HGVVTMVEATFLEAT*GVYISLLFLRESRP
Trigger: TGGCCTTGACTCTCTTAAGAATAACAGTGAAATATATACTCCTCAAGTTGCCTCCAAAAATGTTGCCTCTACCATGGTGACTACCCCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304698.10
3UTR TCA 90 bp TCTAGCTATAATTTTACTGAAGCTAATGTGGCTGTTTTGGTTCACTaGACTTGTTTACATGGTTTGGGTCTCTATGCTGCTCCCATGTTG +
Preference number: 1 (lower is better)
Translates to: SSYNFTEANVAVLVH*TCLHGLGLYAAPML
Trigger: CAACATGGGAGCAGCATAGAGACCCAAACCATGTAAACAAGTTCAGTGAACCAAAACAGCCACATTAGCTTCAGTAAAATTATAGCTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304698.10
3UTR GCA 90 bp AACCAAAGAGCTGGTGTCTCCCTCTCTAATGACCAAGTAGCTTCTTaGCCATCTTATATAAATGTAGGATTTACGTTTGGGATGATACAA +
Preference number: 1 (lower is better)
Translates to: NQRAGVSLSNDQVAS*PSYINVGFTFGMIQ
Trigger: TTGTATCATCCCAAACGTAAATCCTACATTTATATAAGATGGGCAAGAAGCTACTTGGTCATTAGAGAGGGAGACACCAGCTCTTTGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
3UTR TCA 90 bp GGACATCATTTGACCCACAGATCTCTAAAACCCTATAATACGTATTaGTACCAGAGGATTCAAACACATAGTGGTCTGAAAATGATTGCC +
Preference number: 1 (lower is better)
Translates to: GHHLTHRSLKPYNTY*YQRIQTHSGLKMIA
Trigger: GGCAATCATTTTCAGACCACTATGTGTTTGAATCCTCTGGTATCAATACGTATTATAGGGTTTTAGAGATCTGTGGGTCAAATGATGTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304698.10
3UTR CCA 90 bp ATTGCACATCTAGCTATAATTTTACTGAAGCTAATGTGGCTGTTTTaGTTCACTGAACTTGTTTACATGGTTTGGGTCTCTATGCTGCTC +
Preference number: 1 (lower is better)
Translates to: IAHLAIILLKLMWLF*FTELVYMVWVSMLL
Trigger: GAGCAGCATAGAGACCCAAACCATGTAAACAAGTTCAGTGAACCAAAACAGCCACATTAGCTTCAGTAAAATTATAGCTAGATGTGCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304698.10
3UTR CCA 90 bp GGAGTATATATTTCACTGTTATTCTTAAGAGAGTCAAGGCCAAACTaGCTGGCTGAGCAACATTTTCAGATAACTAACATCTTGAAGCTA +
Preference number: 1 (lower is better)
Translates to: GVYISLLFLRESRPN*LAEQHFQITNILKL
Trigger: TAGCTTCAAGATGTTAGTTATCTGAAAATGTTGCTCAGCCAGCCAGTTTGGCCTTGACTCTCTTAAGAATAACAGTGAAATATATACTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304698.10
3UTR CAA 90 bp CCATGGGGTAGTCACCATGGTAGAGGCAACATTTTTGGAGGCAACTaGAGGAGTATATATTTCACTGTTATTCTTAAGAGAGTCAAGGCC +
Preference number: 2 (lower is better)
Translates to: PWGSHHGRGNIFGGN*RSIYFTVILKRVKA
Trigger: GGCCTTGACTCTCTTAAGAATAACAGTGAAATATATACTCCTCAAGTTGCCTCCAAAAATGTTGCCTCTACCATGGTGACTACCCCATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304698.10
3UTR CAA 90 bp GAATTACCATTTACTCTGCTTGAGACATGTCCAAGAACCATGAGATaGCTCAGTCTCATTTTCTTAAGTTCGTACTGCAATTTACAACAA +
Preference number: 2 (lower is better)
Translates to: ELPFTLLETCPRTMR*LSLIFLSSYCNLQQ
Trigger: TTGTTGTAAATTGCAGTACGAACTTAAGAAAATGAGACTGAGCAATCTCATGGTTCTTGGACATGTCTCAAGCAGAGTAAATGGTAATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304698.10
3UTR CAA 90 bp AAGGCACTTCAGCAGAGCACTAACTTTAACCTTTTCCAAATCATTTaGAGTCATGCTGCTTTTGATGTATCTTTCTGTGTAAGACCAATA +
Preference number: 2 (lower is better)
Translates to: KALQQSTNFNLFQII*SHAAFDVSFCVRPI
Trigger: TATTGGTCTTACACAGAAAGATACATCAAAAGCAGCATGACTCAAAATGATTTGGAAAAGGTTAAAGTTAGTGCTCTGCTGAAGTGCCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304698.10
3UTR GCA 72 bp GCTGGTGTCTCCCTCTCTAATGACCAAGTAGCTTCTTaGCCATCTTATATAAATGTAGGATTTACGTTTGGG +
Preference number: 3 (lower is better)
Translates to: AGVSLSNDQVAS*PSYINVGFTFG
Trigger: CCCAAACGTAAATCCTACATTTATATAAGATGGGCAAGAAGCTACTTGGTCATTAGAGAGGGAGACACCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
3UTR TCA 72 bp AATTTTACTGAAGCTAATGTGGCTGTTTTGGTTCACTaGACTTGTTTACATGGTTTGGGTCTCTATGCTGCT +
Preference number: 3 (lower is better)
Translates to: NFTEANVAVLVH*TCLHGLGLYAA
Trigger: AGCAGCATAGAGACCCAAACCATGTAAACAAGTTCAGTGAACCAAAACAGCCACATTAGCTTCAGTAAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304698.10
3UTR CCA 72 bp ATTTCACTGTTATTCTTAAGAGAGTCAAGGCCAAACTaGCTGGCTGAGCAACATTTTCAGATAACTAACATC +
Preference number: 3 (lower is better)
Translates to: ISLLFLRESRPN*LAEQHFQITNI
Trigger: GATGTTAGTTATCTGAAAATGTTGCTCAGCCAGCCAGTTTGGCCTTGACTCTCTTAAGAATAACAGTGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304698.10
3UTR TCA 72 bp TTGACCCACAGATCTCTAAAACCCTATAATACGTATTaGTACCAGAGGATTCAAACACATAGTGGTCTGAAA +
Preference number: 3 (lower is better)
Translates to: LTHRSLKPYNTY*YQRIQTHSGLK
Trigger: TTTCAGACCACTATGTGTTTGAATCCTCTGGTATCAATACGTATTATAGGGTTTTAGAGATCTGTGGGTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304698.10
3UTR CCA 72 bp CTAGCTATAATTTTACTGAAGCTAATGTGGCTGTTTTaGTTCACTGAACTTGTTTACATGGTTTGGGTCTCT +
Preference number: 3 (lower is better)
Translates to: LAIILLKLMWLF*FTELVYMVWVS
Trigger: AGAGACCCAAACCATGTAAACAAGTTCAGTGAACCAAAACAGCCACATTAGCTTCAGTAAAATTATAGCTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304698.10
3UTR CCA 72 bp ATTGCACATCTAGCTATAATTTTACTGAAGCTAATGTaGCTGTTTTGGTTCACTGAACTTGTTTACATGGTT +
Preference number: 3 (lower is better)
Translates to: IAHLAIILLKLM*LFWFTELVYMV
Trigger: AACCATGTAAACAAGTTCAGTGAACCAAAACAGCCACATTAGCTTCAGTAAAATTATAGCTAGATGTGCAAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR GCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCAGGCCGAGAAGCAGGGTaGAGGGGACACGCCGGCAGA +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAGREAG*RGHAGR
Trigger: TCTGCCGGCGTGTCCCCTGCACCCTGCTTCTCGGCC...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR GCA 90 bp CTTTTCCTCCAGAATATATTTTCACACATATTGCAGCAAGAGGAGTCAATTCAAGGCCGAGAAGCAGGGTaGAGGGGACACGCCGGCAGA +
Preference number: 4 (lower is better)
Translates to: LFLQNIFSHILQQEESIQGREAG*RGHAGR
Trigger: TCTGCCGGCGTGTCCCCTGCACCCTGCTTCTCGGCC...TTGAATTGACTCCTCTTGCTGCAATATGTGTGAAAATATATTCTGGAGGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612606.1
CDS-3UTR GCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCACGTCAAGGTGGAGGTTaGCCCAGGCACCTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETARQGGG*PRHLCP
Trigger: AGGACAGAGGTGCCTGGGGCAACCTCCACCTTGACG...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR CCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCACTGGAACCGTCAAGGTaGAGGTTGCCCCAGGCACCT +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETALEPSR*RLPQAP
Trigger: AGGTGCCTGGGGCAACCTCCACCTTGACGGTTCCAG...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR TCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCAGTATCGGCTCCAATCTaGAGCCTGGGATGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAVSAPI*SLGWQA
Trigger: AGCCTGCCATCCCAGGCTTCAGATTGGAGCCGATAC...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR CCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCAGGGAGGGCTTTCCTTTaGACAGCTCCAGGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAGRAFL*TAPGGS
Trigger: AGACCCTCCTGGAGCTGTCCAAAGGAAAGCCCTCCC...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR CCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCACAGGGGAACAGACGGTaGTTCCACTCTCACTGCTGC +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAQGNRR*FHSHCC
Trigger: GCAGCAGTGAGAGTGGAACCACCGTCTGTTCCCCTG...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR GCA 90 bp TTCCTCCAGAATATATTTTCACACATATTGCAGCAAGAGGAGTCAATTCAATGTCGTCAAGGTGGAGGTTaGCCCAGGCACCTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: FLQNIFSHILQQEESIQCRQGGG*PRHLCP
Trigger: AGGACAGAGGTGCCTGGGGCAACCTCCACCTTGACG...ACATTGAATTGACTCCTCTTGCTGCAATATGTGTGAAAATATATTCTGGAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612606.1
CDS-3UTR CCA 90 bp CTTTTCCTCCAGAATATATTTTCACACATATTGCAGCAAGAGGAGTCAATTCAACTGGAACCGTCAAGGTaGAGGTTGCCCCAGGCACCT +
Preference number: 4 (lower is better)
Translates to: LFLQNIFSHILQQEESIQLEPSR*RLPQAP
Trigger: AGGTGCCTGGGGCAACCTCCACCTTGACGGTTCCAG...TTGAATTGACTCCTCTTGCTGCAATATGTGTGAAAATATATTCTGGAGGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612606.1
CDS-3UTR CCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCACTCTTCCCTGGCATCTaGGGGCTGTGCATGAGAATG +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETALFPGI*GLCMRM
Trigger: CATTCTCATGCACAGCCCCCAGATGCCAGGGAAGAG...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR TCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCAACCATTCCCCGACCATaGTTTACCCAAGCACCTGTG +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETATIPRP*FTQAPV
Trigger: CACAGGTGCTTGGGTAAATCATGGTCGGGGAATGGT...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR GCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCACCAGACTGGTGTCATTaGTCTGGGTTCTCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAPDWCH*SGFSCP
Trigger: AGGGCAAGAGAACCCAGAGCAATGACACCAGTCTGG...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR GCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCAGACTCTTCTCCAGGGTaGTCCATGATCACTCCACTC +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETADSSPG*SMITPL
Trigger: GAGTGGAGTGATCATGGAGCACCCTGGAGAAGAGTC...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR CCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCAAGCTGTTCAGGAATATaGGAACGCCCATACGCCTCC +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETASCSGI*ERPYAS
Trigger: GGAGGCGTATGGGCGTTCCCATATTCCTGAACAGCT...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR TCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCAGCTTGGCTCAGGTACTaGCGACTGATGATGTCATTC +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAAWLRY*RLMMSF
Trigger: GAATGACATCATCAGTCGTCAGTACCTGAGCCAAGC...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR GCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCAGGAGTGCCTCACTTGTaGAACTGGCTTTCCATCAAG +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAGVPHL*NWLSIK
Trigger: CTTGATGGAAAGCCAGTTGCACAAGTGAGGCACTCC...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR GCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCACCTCCATCTAGGATGTaGCTTAAAGCTGGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAPPSRM*LKAGSS
Trigger: TGAGGACCCAGCTTTAAGGCACATCCTAGATGGAGG...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR CCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCATCTAGTTCCTGGAAGTaGAGCTGCTATCCAGTACCC +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETASSSWK*SCYPVP
Trigger: GGGTACTGGATAGCAGCTCCACTTCCAGGAACTAGA...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR CCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCATCTTGCTATCTCTTTTaGCTAGTGGTGGTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETASCYLF*LVVVCP
Trigger: GGGGCAGACCACCACTAGCCAAAAGAGATAGCAAGA...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR TCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCACAGGAGGGTCTGTTCTaGAATTCCTTGAAGTTCCGA +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAQEGLF*NSLKFR
Trigger: TCGGAACTTCAAGGAATTTCAGAACAGACCCTCCTG...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR TCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCAGCCAAACTGGCTGGCTaGGCAACATTTTCAGATAAC +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAAKLAG*ATFSDN
Trigger: GTTATCTGAAAATGTTGCTCAGCCAGCCAGTTTGGC...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR GCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCATCAGCCTCCTCCAGCTaGTTTTGCTGTTGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETASASSS*FCCCCC
Trigger: ACAACAACAACAGCAAAAGCAGCTGGAGGAGGCTGA...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR GCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCACGGATTCCAGTAAGCTaGTTGAGTATCGGCTCCAAT +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETARIPVS*LSIGSN
Trigger: ATTGGAGCCGATACTCAAGCAGCTTACTGGAATCCG...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR GCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCAAGGTCTATAAAGGAGTaGCTCACTTGTGCAACTGGC +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETARSIKE*LTCATG
Trigger: GCCAGTTGCACAAGTGAGGCACTCCTTTATAGACCT...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR GCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCACCCACAAGGGAAAGGTaGTTCAGACATTTGCCTTCA +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAPTRER*FRHLPS
Trigger: TGAAGGCAAATGTCTGAAGCACCTTTCCCTTGTGGG...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR CCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCAGTTTGGACCCTACATTaGGCTCCAAAGACTGTGTTG +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAVWTLH*APKTVL
Trigger: CAACACAGTCTTTGGAGCCCAATGTAGGGTCCAAAC...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR CCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCACCTCACTTGTGCAACTaGCTTTCCATCAAGAGACAC +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAPHLCN*LSIKRH
Trigger: GTGTCTCTTGATGGAAAGCCAGTTGCACAAGTGAGG...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR CCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCACTGGTGTCATTGCTCTaGGTTCTCTTGCCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETALVSLL*VLLPFF
Trigger: GAAAAAGGGCAAGAGAACCCAGAGCAATGACACCAG...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR CCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCACAAGGCCAAACTGGCTaGCTGAGCAACATTTTCAGA +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAQGQTG*LSNIFR
Trigger: TCTGAAAATGTTGCTCAGCCAGCCAGTTTGGCCTTG...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR CCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCAGAGTCAAGGCCAAACTaGCTGGCTGAGCAACATTTT +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAESRPN*LAEQHF
Trigger: AAAATGTTGCTCAGCCAGCCAGTTTGGCCTTGACTC...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR TCA 90 bp TCCTCCAGAATATATTTTCACACATATTGCAGCAAGAGGAGTCAATTCAATGTTGCTTGGCTCAGGTACTaGCGACTGATGATGTCATTC +
Preference number: 4 (lower is better)
Translates to: SSRIYFHTYCSKRSQFNVAWLRY*RLMMSF
Trigger: GAATGACATCATCAGTCGTCAGTACCTGAGCCAAGC...AACATTGAATTGACTCCTCTTGCTGCAATATGTGTGAAAATATATTCTGGAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612606.1
CDS-3UTR TCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCAGATTGTTATGTTCCTTaGCCATTCCCCGACCATGAT +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETADCYVP*PFPDHD
Trigger: ATCATGGTCGGGGAATGGTCAAGGAACATAACAATC...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR TCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCAAAAAGGTCAGATGTTTaGAGGATGGCAATGGGTTGG +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAKRSDV*RMAMGW
Trigger: CCAACCCATTGCCATCCTTCAAACATCTGACCTTTT...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR TCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCAGTTGACCTTCAAGTATaGTATCCTCTTCCCTGGCAT +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAVDLQV*YPLPWH
Trigger: ATGCCAGGGAAGAGGATATCATACTTGAAGGTCAAC...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR TCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCAAGCTTTCTACTTGAGTaGAGCTCATTCATGTCCACC +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETASFLLE*SSFMST
Trigger: GGTGGACATGAATGAGCTTCACTCAAGTAGAAAGCT...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR TCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCACTCGAGCTTTCTACTTaGGTGAAGCTCATTCATGTC +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETALELST*VKLIHV
Trigger: GACATGAATGAGCTTCACTCAAGTAGAAAGCTCGAG...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR GCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCATCCTCCAGCTGCTTTTaGTGTTGTTGTTGTTGTTGC +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETASSSCF*CCCCCC
Trigger: GCAACAACAACAACAACAGCAAAAGCAGCTGGAGGA...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR GCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCAAGGTATGCGATCCCCTaGACTTATATCATTCAGACG +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETARYAIP*TYIIQT
Trigger: CGTCTGAATGATATAAGTGCAGGGGATCGCATACCT...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR GCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCAATGTCCAAGCAGGTATaGGATCCCCTGCACTTATAT +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAMSKQV*DPLHLY
Trigger: ATATAAGTGCAGGGGATCGCATACCTGCTTGGACAT...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR CCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCACATAAATACAGACACTaGAACCGTCAAGGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAHKYRH*NRQGGG
Trigger: ACCTCCACCTTGACGGTTCCAGTGTCTGTATTTATG...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR CCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCAATATTGGCATTCTTCTaGTTTTCCAAGGCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAILAFF*FSKAEG
Trigger: CCCCTCTGCCTTGGAAAACCAGAAGAATGCCAATAT...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR CCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCACCAGTACCCCAAATGTaGTGCATCATATGTCCAGAT +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAPVPQM*CIICPD
Trigger: ATCTGGACATATGATGCACCACATTTGGGGTACTGG...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR CCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCAGTTGTTGAAGTTGTCTaGTCTCTCTTGAGGACCTCA +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAVVEVV*SLLRTS
Trigger: TGAGGTCCTCAAGAGAGACCAGACAACTTCAACAAC...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR CCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCAATTTATGGGAATCAGTaGGCGTTCCTCTCGCTTCTT +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAIYGNQ*AFLSLL
Trigger: AAGAAGCGAGAGGAACGCCCACTGATTCCCATAAAT...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR CCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCACTTGTTTACATGGTTTaGGTCTCTATGCTGCTCCCA +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETALVYMV*VSMLLP
Trigger: TGGGAGCAGCATAGAGACCCAAACCATGTAAACAAG...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR TCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCATTCTGTTTCTGCCTTTaGTGGTTCCTTTTTCTGAGG +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAFCFCL*WFLFLR
Trigger: CCTCAGAAAAAGGAACCATCAAAGGCAGAAACAGAA...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR TCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCACATGTCCAAGAACCATaGGATTGCTCAGTCTCATTT +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAHVQEP*DCSVSF
Trigger: AAATGAGACTGAGCAATCTCATGGTTCTTGGACATG...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR TCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCAACCATTTACTCTGCTTaGGACATGTCCAAGAACCAT +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETATIYSA*DMSKNH
Trigger: ATGGTTCTTGGACATGTCTCAAGCAGAGTAAATGGT...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR TCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCAATGCTGCTCCCATGTTaGATAGGAGGGAATGAAAAA +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAMLLPC*IGGNEK
Trigger: TTTTTCATTCCCTCCTATTCAACATGGGAGCAGCAT...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR TCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCAAGTAGGAAGGTTATTTaGCACGTTAGAAGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETASRKVI*HVRSWR
Trigger: CCTCCAACTTCTAACGTGTCAAATAACCTTCCTACT...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR TCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCATCGTACATGGGAAAATaGGAAACTCATGCGCCTTAT +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETASYMGK*ETHAPY
Trigger: ATAAGGCGCATGAGTTTCTCATTTTCCCATGTACGA...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR GCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCATGGTTCCACTCTCACTaGTGCTTAGGTCTAAATCTT +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAWFHSH*CLGLNL
Trigger: AAGATTTAGACCTAAGCAGCAGTGAGAGTGGAACCA...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR GCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCACAAAATCTTCAACAGTaGTTTTCCTTCCTGGCGACT +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAQNLQQ*FSFLAT
Trigger: AGTCGCCAGGAAGGAAAAGCACTGTTGAAGATTTTG...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR CCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCAAGCCATATATTTGCTTaGCTTTGCGGGAACAGTGAA +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETASHIFA*LCGNSE
Trigger: TTCACTGTTCCCGCAAAGCCAAGCAAATATATGGCT...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR CCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCACACTTGGTTGAGACTTaGCATCAGCTAATTTTCCAG +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAHLVET*HQLIFQ
Trigger: CTGGAAAATTAGCTGATGCCAAGTCTCAACCAAGTG...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR TCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCAAGAGGAAGAGAAACTTaGATAGAGCCATTGACCTTT +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETARGRET*IEPLTF
Trigger: AAAGGTCAATGGCTCTATTCAAGTTTCTCTTCCTCT...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR TCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCAGATGGTTCCTTTTTCTaGGGACTATATGAGGAGTTT +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETADGSFF*GLYEEF
Trigger: AAACTCCTCATATAGTCCTCAGAAAAAGGAACCATC...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR TCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCATACCTCTTTTCATCTTaGGCATCACCTAGAGATGAA +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAYLFSS*ASPRDE
Trigger: TTCATCTCTAGGTGATGCTCAAGATGAAAAGAGGTA...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR TCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCATCCTTGAAGTTCCGATaGAAATGGAGTCATTACAAC +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETASLKFR*KWSHYN
Trigger: GTTGTAATGACTCCATTTTCATCGGAACTTCAAGGA...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR TCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCAGCTGTTTTGGTTCACTaGACTTGTTTACATGGTTTG +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAAVLVH*TCLHGL
Trigger: CAAACCATGTAAACAAGTTCAGTGAACCAAAACAGC...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR TCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCAGAGTCATGCTGCTTTTaGTGTATCTTTCTGTGTAAG +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAESCCF*CIFLCK
Trigger: CTTACACAGAAAGATACATCAAAAGCAGCATGACTC...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR TCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCAAATAAGTGGCATACCTaGATGGTATACCCTTATACC +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETANKWHT*MVYPYT
Trigger: GGTATAAGGGTATACCATTCAGGTATGCCACTTATT...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR TCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCACCTATAATTACCAATTaGGAACAGCATGTGCAGTGT +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAPIITN*EQHVQC
Trigger: ACACTGCACATGCTGTTCTCAATTGGTAATTATAGG...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR GCA 90 bp TTCCTCCAGAATATATTTTCACACATATTGCAGCAAGAGGAGTCAATTCAATGTTCCTCCAGCTGCTTTTaGTGTTGTTGTTGTTGTTGC +
Preference number: 4 (lower is better)
Translates to: FLQNIFSHILQQEESIQCSSSCF*CCCCCC
Trigger: GCAACAACAACAACAACAGCAAAAGCAGCTGGAGGA...ACATTGAATTGACTCCTCTTGCTGCAATATGTGTGAAAATATATTCTGGAGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612606.1
CDS-3UTR GCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCAATATTTGCTTGGCTTTaGGGGAACAGTGAAAGTGTA +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAIFAWL*GNSESV
Trigger: TACACTTTCACTGTTCCCGCAAAGCCAAGCAAATAT...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR GCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCATACCACACTTGTCCCTaGAATAACAAAGTAGTACAG +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAYHTCP*NNKVVQ
Trigger: CTGTACTACTTTGTTATTGCAGGGACAAGTGTGGTA...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR GCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCATTGGCATTGAATAACTaGGACTTGTCCTCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETALALNN*DLSSAF
Trigger: AAAAGCTGAGGACAAGTCGCAGTTATTCAATGCCAA...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR GCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCAATTTTGGGCAAGGTCTaGGTAAAGTTCTCTCGATTT +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAILGKV*VKFSRF
Trigger: AAATCGAGAGAACTTTACGCAGACCTTGCCCAAAAT...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR GCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCATTCCACTCTCACTGCTaGTTAGGTCTAAATCTTCTA +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAFHSHC*LGLNLL
Trigger: TAGAAGATTTAGACCTAAGCAGCAGTGAGAGTGGAA...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR CCA 90 bp TCCTCCAGAATATATTTTCACACATATTGCAGCAAGAGGAGTCAATTCAATGTTCATAAATACAGACACTaGAACCGTCAAGGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: SSRIYFHTYCSKRSQFNVHKYRH*NRQGGG
Trigger: ACCTCCACCTTGACGGTTCCAGTGTCTGTATTTATG...AACATTGAATTGACTCCTCTTGCTGCAATATGTGTGAAAATATATTCTGGAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612606.1
CDS-3UTR CCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCATTTGAAGGATGGCAATaGGTTGGCTGTAAATATGCA +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAFEGWQ*VGCKYA
Trigger: TGCATATTTACAGCCAACCCATTGCCATCCTTCAAA...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR CCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCAGTAATTGTTCCGGTGTaGAGAAAAGGTCAGATGTTT +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAVIVPV*RKGQMF
Trigger: AAACATCTGACCTTTTCTCCACACCGGAACAATTAC...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR CCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCAGTTCTCTCGATTTACTaGTTCCATCAATTGGCCATA +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAVLSIY*FHQLAI
Trigger: TATGGCCAATTGATGGAACCAGTAAATCGAGAGAAC...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR CCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCAATTGGAGTTAATTTATaGGAATCAGTGGGCGTTCCT +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAIGVNL*ESVGVP
Trigger: AGGAACGCCCACTGATTCCCATAAATTAACTCCAAT...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR CCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCATTTCTAAATGTTCCATaGGGTAGTCACCATGGTAGA +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAFLNVP*GSHHGR
Trigger: TCTACCATGGTGACTACCCCATGGAACATTTAGAAA...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR TCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCAGTAACGTTGCTAATATaGTGGTTGTCAGGAAGTTTA +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAVTLLI*WLSGSL
Trigger: TAAACTTCCTGACAACCATCATATTAGCAACGTTAC...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR TCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCAATTTATGTGTGTTGTTaGAGTTGTCTGGTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAIYVCC*SCLVSL
Trigger: AAGAGAGACCAGACAACTTCAACAACACACATAAAT...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR TCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCAGATTTACGTTTGGGATaGTACAATACACATGCTCTT +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETADLRLG*YNTHAL
Trigger: AAGAGCATGTGTATTGTATCATCCCAAACGTAAATC...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR TCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCACTGTGCTTTAGTAAATaGATCCATCAGTTAGTCAAG +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETALCFSK*IHQLVK
Trigger: CTTGACTAACTGATGGATTCATTTACTAAAGCACAG...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR TCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCACCCTATAATACGTATTaGTACCAGAGGATTCAAACA +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAPYNTY*YQRIQT
Trigger: TGTTTGAATCCTCTGGTATCAATACGTATTATAGGG...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR CCA 90 bp TCCTCCAGAATATATTTTCACACATATTGCAGCAAGAGGAGTCAATTCAATGTTAGCCATATATTTGCTTaGCTTTGCGGGAACAGTGAA +
Preference number: 4 (lower is better)
Translates to: SSRIYFHTYCSKRSQFNVSHIFA*LCGNSE
Trigger: TTCACTGTTCCCGCAAAGCCAAGCAAATATATGGCT...AACATTGAATTGACTCCTCTTGCTGCAATATGTGTGAAAATATATTCTGGAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612606.1
CDS-3UTR CCA 90 bp TCCTCCAGAATATATTTTCACACATATTGCAGCAAGAGGAGTCAATTCAATGTTCACTTGGTTGAGACTTaGCATCAGCTAATTTTCCAG +
Preference number: 4 (lower is better)
Translates to: SSRIYFHTYCSKRSQFNVHLVET*HQLIFQ
Trigger: CTGGAAAATTAGCTGATGCCAAGTCTCAACCAAGTG...AACATTGAATTGACTCCTCTTGCTGCAATATGTGTGAAAATATATTCTGGAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612606.1
CDS-3UTR CCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCACTAATGTGGCTGTTTTaGTTCACTGAACTTGTTTAC +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETALMWLF*FTELVY
Trigger: GTAAACAAGTTCAGTGAACCAAAACAGCCACATTAG...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR CCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCATTACTGAAGCTAATGTaGCTGTTTTGGTTCACTGAA +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETALLKLM*LFWFTE
Trigger: TTCAGTGAACCAAAACAGCCACATTAGCTTCAGTAA...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR CCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCATACAATGCTCGTACATaGGAAAATGAGAAACTCATG +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAYNART*ENEKLM
Trigger: CATGAGTTTCTCATTTTCCCATGTACGAGCATTGTA...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR GCA 90 bp TCCTCCAGAATATATTTTCACACATATTGCAGCAAGAGGAGTCAATTCAATGTTATATTTGCTTGGCTTTaGGGGAACAGTGAAAGTGTA +
Preference number: 4 (lower is better)
Translates to: SSRIYFHTYCSKRSQFNVIFAWL*GNSESV
Trigger: TACACTTTCACTGTTCCCGCAAAGCCAAGCAAATAT...AACATTGAATTGACTCCTCTTGCTGCAATATGTGTGAAAATATATTCTGGAGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612606.1
CDS-3UTR GCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCATATTTTCACACATATTaGAGCAAGAGGAGTCAATTC +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAYFHTY*SKRSQF
Trigger: GAATTGACTCCTCTTGCTGCAATATGTGTGAAAATA...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR GCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCAAATTACCATTTACTCTaGTTGAGACATGTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETANYHLL*LRHVQE
Trigger: TTCTTGGACATGTCTCAAGCAGAGTAAATGGTAATT...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR GCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCAGACCAAGTAGCTTCTTaGCCATCTTATATAAATGTA +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETADQVAS*PSYINV
Trigger: TACATTTATATAAGATGGGCAAGAAGCTACTTGGTC...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR CCA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCATGTAGGATTTACGTTTaGGATGATACAATACACATG +
Preference number: 4 (lower is better)
Translates to: KFVLQFTTRSKNKQHETACRIYV*DDTIHM
Trigger: CATGTGTATTGTATCATCCCAAACGTAAATCCTACA...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR TCA 90 bp TTCCTCCAGAATATATTTTCACACATATTGCAGCAAGAGGAGTCAATTCAATGTGTAACGTTGCTAATATaGTGGTTGTCAGGAAGTTTA +
Preference number: 4 (lower is better)
Translates to: FLQNIFSHILQQEESIQCVTLLI*WLSGSL
Trigger: TAAACTTCCTGACAACCATCATATTAGCAACGTTAC...ACATTGAATTGACTCCTCTTGCTGCAATATGTGTGAAAATATATTCTGGAGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612606.1
3UTR CAA 72 bp CAGCAGAGCACTAACTTTAACCTTTTCCAAATCATTTaGAGTCATGCTGCTTTTGATGTATCTTTCTGTGTA +
Preference number: 4 (lower is better)
Translates to: QQSTNFNLFQII*SHAAFDVSFCV
Trigger: TACACAGAAAGATACATCAAAAGCAGCATGACTCAAAATGATTTGGAAAAGGTTAAAGTTAGTGCTCTGCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304698.10
3UTR CAA 72 bp TATTCTGAAAGCAAACAAGTAGTTCTAGAAAAGCCCTaGGGATACATCATCTCATTTCCCTTACACAAAAAT +
Preference number: 4 (lower is better)
Translates to: YSESKQVVLEKP*GYIISFPLHKN
Trigger: ATTTTTGTGTAAGGGAAATGAGATGATGTATCCCAAGGGCTTTTCTAGAACTACTTGTTTGCTTTCAGAATA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR GCA 90 bp TCCTCCAGAATATATTTTCACACATATTGCAGCAAGAGGAGTCAATTCAATGTTTATTTTCACACATATTaGAGCAAGAGGAGTCAATTC +
Preference number: 4 (lower is better)
Translates to: SSRIYFHTYCSKRSQFNVYFHTY*SKRSQF
Trigger: GAATTGACTCCTCTTGCTGCAATATGTGTGAAAATA...AACATTGAATTGACTCCTCTTGCTGCAATATGTGTGAAAATATATTCTGGAGGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612606.1
CDS CCA 90 bp GGCCGAGAAGCAGGGTGCAGGGGACACGCCGGCAGAGCCTCGCCATaGCCTAGAGCCAGAGGGCCGCGGCGGCATATTGCGGGGCTCCGG +
Preference number: 5 (lower is better)
Translates to: GREAGCRGHAGRASP*PRARGPRRHIAGLR
Trigger: CCGGAGCCCCGCAATATGCCGCCGCGGCCCTCTGGCTCTAGGCCATGGCGAGGCTCTGCCGGCGTGTCCCCTGCACCCTGCTTCTCGGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304698.10
ENST00000612606.1
CDS GCA 90 bp GCCTCCTCCAGCTGCTTTTGCTGTTGTTGTTGTTGTTGCTGCTGCTaGTGCTGCTGTTGGATGAGGCTGAGGTCGGAGCGGCTGAGTTCC +
Preference number: 5 (lower is better)
Translates to: ASSSCFCCCCCCCCC*CCCWMRLRSERLSS
Trigger: GGAACTCAGCCGCTCCGACCTCAGCCTCATCCAACAGCAGCAGCAGCAGCAGCAACAACAACAACAACAGCAAAAGCAGCTGGAGGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304698.10
ENST00000612606.1
CDS GCA 90 bp TCCTCAGCCTCCTCCAGCTGCTTTTGCTGTTGTTGTTGTTGTTGCTaGTGCTGCTGCTGCTGTTGGATGAGGCTGAGGTCGGAGCGGCTG +
Preference number: 5 (lower is better)
Translates to: SSASSSCFCCCCCCC*CCCCCWMRLRSERL
Trigger: CAGCCGCTCCGACCTCAGCCTCATCCAACAGCAGCAGCAGCAGCAGCAACAACAACAACAACAGCAAAAGCAGCTGGAGGAGGCTGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304698.10
ENST00000612606.1
CDS GCA 90 bp TCCTCCTCAGCCTCCTCCAGCTGCTTTTGCTGTTGTTGTTGTTGTTaGTGCTGCTGCTGCTGCTGTTGGATGAGGCTGAGGTCGGAGCGG +
Preference number: 5 (lower is better)
Translates to: SSSASSSCFCCCCCC*CCCCCCWMRLRSER
Trigger: CCGCTCCGACCTCAGCCTCATCCAACAGCAGCAGCAGCAGCAGCAACAACAACAACAACAGCAAAAGCAGCTGGAGGAGGCTGAGGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304698.10
ENST00000612606.1
CDS GCA 90 bp TCCAGCTGCTTTTGCTGTTGTTGTTGTTGTTGCTGCTGCTGCTGCTaGTGTTGGATGAGGCTGAGGTCGGAGCGGCTGAGTTCCGCTCTG +
Preference number: 5 (lower is better)
Translates to: SSCFCCCCCCCCCCC*CWMRLRSERLSSAL
Trigger: CAGAGCGGAACTCAGCCGCTCCGACCTCAGCCTCATCCAACAGCAGCAGCAGCAGCAGCAACAACAACAACAACAGCAAAAGCAGCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304698.10
ENST00000612606.1
CDS GCA 90 bp TCCTCCAGCTGCTTTTGCTGTTGTTGTTGTTGTTGCTGCTGCTGCTaGTGCTGTTGGATGAGGCTGAGGTCGGAGCGGCTGAGTTCCGCT +
Preference number: 5 (lower is better)
Translates to: SSSCFCCCCCCCCCC*CCWMRLRSERLSSA
Trigger: AGCGGAACTCAGCCGCTCCGACCTCAGCCTCATCCAACAGCAGCAGCAGCAGCAGCAACAACAACAACAACAGCAAAAGCAGCTGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304698.10
ENST00000612606.1
CDS GCA 90 bp TCAGCCTCCTCCAGCTGCTTTTGCTGTTGTTGTTGTTGTTGCTGCTaGTGCTGCTGCTGTTGGATGAGGCTGAGGTCGGAGCGGCTGAGT +
Preference number: 5 (lower is better)
Translates to: SASSSCFCCCCCCCC*CCCCWMRLRSERLS
Trigger: ACTCAGCCGCTCCGACCTCAGCCTCATCCAACAGCAGCAGCAGCAGCAGCAACAACAACAACAACAGCAAAAGCAGCTGGAGGAGGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304698.10
ENST00000612606.1
CDS GCA 90 bp TCTCCAGGGTGCTCCATGATCACTCCACTCCCTCCATCTAGGATGTaGCTTAAAGCTGGGTCCTCAGGGGAACAGACGGTGGTTCCACTC +
Preference number: 5 (lower is better)
Translates to: SPGCSMITPLPPSRM*LKAGSSGEQTVVPL
Trigger: GAGTGGAACCACCGTCTGTTCCCCTGAGGACCCAGCTTTAAGGCACATCCTAGATGGAGGGAGTGGAGTGATCATGGAGCACCCTGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS TCA 90 bp CTTGAGTATCGGCTCCAATCTGAAGCCTGGGATGGCAGGCTCTGTTaGCCTTCAAGTATGATATCCTCTTCCCTGGCATCTGGGGGCTGT +
Preference number: 5 (lower is better)
Translates to: LEYRLQSEAWDGRLC*PSSMISSSLASGGC
Trigger: ACAGCCCCCAGATGCCAGGGAAGAGGATATCATACTTGAAGGTCAACAGAGCCTGCCATCCCAGGCTTCAGATTGGAGCCGATACTCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS TCA 90 bp CAACAGTGCTTTTCCTTCCTGGCGACTCTTCTCCAGGGTGCTCCATaGTCACTCCACTCCCTCCATCTAGGATGTGCCTTAAAGCTGGGT +
Preference number: 5 (lower is better)
Translates to: QQCFSFLATLLQGAP*SLHSLHLGCALKLG
Trigger: ACCCAGCTTTAAGGCACATCCTAGATGGAGGGAGTGGAGTGATCATGGAGCACCCTGGAGAAGAGTCGCCAGGAAGGAAAAGCACTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS GCA 90 bp AAGCTGGGTCCTCAGGGGAACAGACGGTGGTTCCACTCTCACTGCTaGTTAGGTCTAAATCTTCTAAGTAAAGGATCTTGGGCTGATGCA +
Preference number: 5 (lower is better)
Translates to: KLGPQGNRRWFHSHC*LGLNLLSKGSWADA
Trigger: TGCATCAGCCCAAGATCCTTTACTTAGAAGATTTAGACCTAAGCAGCAGTGAGAGTGGAACCACCGTCTGTTCCCCTGAGGACCCAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS CCA 90 bp CAGGCTCTGTTGACCTTCAAGTATGATATCCTCTTCCCTGGCATCTaGGGGCTGTGCATGAGAATGAATTGGCATTTTGGGCAAGGTCTG +
Preference number: 5 (lower is better)
Translates to: QALLTFKYDILFPGI*GLCMRMNWHFGQGL
Trigger: CAGACCTTGCCCAAAATGCCAATTCATTCTCATGCACAGCCCCCAGATGCCAGGGAAGAGGATATCATACTTGAAGGTCAACAGAGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS GCA 90 bp GGTTCTCTTGCCCTTTTTCAGGTCTATAAAGGAGTGCCTCACTTGTaGAACTGGCTTTCCATCAAGAGACACAAACCAGGCTCTGGGATG +
Preference number: 5 (lower is better)
Translates to: GSLALFQVYKGVPHL*NWLSIKRHKPGSGM
Trigger: CATCCCAGAGCCTGGTTTGTGTCTCTTGATGGAAAGCCAGTTGCACAAGTGAGGCACTCCTTTATAGACCTGAAAAAGGGCAAGAGAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS GCA 90 bp TTAAAGCTGGGTCCTCAGGGGAACAGACGGTGGTTCCACTCTCACTaGTGCTTAGGTCTAAATCTTCTAAGTAAAGGATCTTGGGCTGAT +
Preference number: 5 (lower is better)
Translates to: LKLGPQGNRRWFHSH*CLGLNLLSKGSWAD
Trigger: ATCAGCCCAAGATCCTTTACTTAGAAGATTTAGACCTAAGCAGCAGTGAGAGTGGAACCACCGTCTGTTCCCCTGAGGACCCAGCTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS GCA 90 bp TTGACCTTCAAGTATGATATCCTCTTCCCTGGCATCTGGGGGCTGTaGATGAGAATGAATTGGCATTTTGGGCAAGGTCTGCGTAAAGTT +
Preference number: 5 (lower is better)
Translates to: LTFKYDILFPGIWGL*MRMNWHFGQGLRKV
Trigger: AACTTTACGCAGACCTTGCCCAAAATGCCAATTCATTCTCATGCACAGCCCCCAGATGCCAGGGAAGAGGATATCATACTTGAAGGTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS TCA 90 bp GGCTTTCCTTTGGACAGCTCCAGGAGGGTCTGTTCTGAAATTCCTTaGAGTTCCGATGAAAATGGAGTCATTACAACAGCCTCATTTAGT +
Preference number: 5 (lower is better)
Translates to: GFPLDSSRRVCSEIP*SSDENGVITTASFS
Trigger: ACTAAATGAGGCTGTTGTAATGACTCCATTTTCATCGGAACTTCAAGGAATTTCAGAACAGACCCTCCTGGAGCTGTCCAAAGGAAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR CAA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCAGTCTTGCTATCTCTTTaGGCTAGTGGTGGTCTGCCC +
Preference number: 5 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAVLLSL*ASGGLP
Trigger: GGGCAGACCACCACTAGCCAAAAGAGATAGCAAGAC...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS GCA 90 bp TACTGTGGAATTTGTCTTCGTGTAGTTTACAAACACTTCTACAACTaGTTGGCTCAGGTACTGACGACTGATGATGTCATTCACCTGGAC +
Preference number: 5 (lower is better)
Translates to: YCGICLRVVYKHFYN*LAQVLTTDDVIHLD
Trigger: GTCCAGGTGAATGACATCATCAGTCGTCAGTACCTGAGCCAAGCAGTTGTAGAAGTGTTTGTAAACTACACGAAGACAAATTCCACAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304698.10
ENST00000612606.1
CDS-3UTR CAA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCACACTTCTACAACTGCTaGGCTCAGGTACTGACGACT +
Preference number: 5 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAHFYNC*AQVLTT
Trigger: AGTCGTCAGTACCTGAGCCAAGCAGTTGTAGAAGTG...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR CAA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCAAAAGGAGTGCCTCACTaGTGCAACTGGCTTTCCATC +
Preference number: 5 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAKGVPH*CNWLSI
Trigger: GATGGAAAGCCAGTTGCACAAGTGAGGCACTCCTTT...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR CAA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCATGTTTGGACCCTACATaGGGCTCCAAAGACTGTGTT +
Preference number: 5 (lower is better)
Translates to: KFVLQFTTRSKNKQHETACLDPT*GSKDCV
Trigger: AACACAGTCTTTGGAGCCCAATGTAGGGTCCAAACA...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR CAA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCAGGATGGCAGGCTCTGTaGACCTTCAAGTATGATATC +
Preference number: 5 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAGWQAL*TFKYDI
Trigger: GATATCATACTTGAAGGTCAACAGAGCCTGCCATCC...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR CAA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCAATTCCAGTAAGCTGCTaGAGTATCGGCTCCAATCTG +
Preference number: 5 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAIPVSC*SIGSNL
Trigger: CAGATTGGAGCCGATACTCAAGCAGCTTACTGGAAT...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR CAA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCAACTTGTTTACATGGTTaGGGTCTCTATGCTGCTCCC +
Preference number: 5 (lower is better)
Translates to: KFVLQFTTRSKNKQHETATCLHG*GLYAAP
Trigger: GGGAGCAGCATAGAGACCCAAACCATGTAAACAAGT...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR CAA 90 bp TCCTCCAGAATATATTTTCACACATATTGCAGCAAGAGGAGTCAATTCAATGTTCACTTCTACAACTGCTaGGCTCAGGTACTGACGACT +
Preference number: 5 (lower is better)
Translates to: SSRIYFHTYCSKRSQFNVHFYNC*AQVLTT
Trigger: AGTCGTCAGTACCTGAGCCAAGCAGTTGTAGAAGTG...AACATTGAATTGACTCCTCTTGCTGCAATATGTGTGAAAATATATTCTGGAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612606.1
CDS-3UTR CAA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCAGAGGAGTTTTTGGCATaGAATAACTGCGACTTGTCC +
Preference number: 5 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAEEFLA*NNCDLS
Trigger: GGACAAGTCGCAGTTATTCAATGCCAAAAACTCCTC...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR CAA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCAATATGTTTAGGTTGTTaGGACCCTACATTGGGCTCC +
Preference number: 5 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAICLGC*DPTLGS
Trigger: GGAGCCCAATGTAGGGTCCAAACAACCTAAACATAT...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS TCA 90 bp AATGTGGTGCATCATATGTCCAGATTAAATGATTGTTATGTTCCTTaGCCATTCCCCGACCATGATTTACCCAAGCACCTGTGTTCATAT +
Preference number: 5 (lower is better)
Translates to: NVVHHMSRLNDCYVP*PFPDHDLPKHLCSY
Trigger: ATATGAACACAGGTGCTTGGGTAAATCATGGTCGGGGAATGGTCAAGGAACATAACAATCATTTAATCTGGACATATGATGCACCACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS TCA 90 bp TGCGACTTGTCCTCAGCTTTTAATGCAACTTTAACTGTACTGATATaGTTTATGTGTGTTGTTGAAGTTGTCTGGTCTCTCTTGAGGACC +
Preference number: 5 (lower is better)
Translates to: CDLSSAFNATLTVLI*FMCVVEVVWSLLRT
Trigger: GGTCCTCAAGAGAGACCAGACAACTTCAACAACACACATAAATCATATCAGTACAGTTAAAGTTGCATTAAAAGCTGAGGACAAGTCGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR CAA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCACAAATAGCCATATATTaGCTTGGCTTTGCGGGAACA +
Preference number: 5 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAQIAIY*LGFAGT
Trigger: TGTTCCCGCAAAGCCAAGCAAATATATGGCTATTTG...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR CAA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCATTGAAAACTGAACACTaGGTTGAGACTTGGCATCAG +
Preference number: 5 (lower is better)
Translates to: KFVLQFTTRSKNKQHETALKTEH*VETWHQ
Trigger: CTGATGCCAAGTCTCAACCAAGTGTTCAGTTTTCAA...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR CAA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCATCTCGAGCTTTCTACTaGAGTGAAGCTCATTCATGT +
Preference number: 5 (lower is better)
Translates to: KFVLQFTTRSKNKQHETASRAFY*SEAHSC
Trigger: ACATGAATGAGCTTCACTCAAGTAGAAAGCTCGAGA...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR CAA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCATACCATTTACTCTGCTaGAGACATGTCCAAGAACCA +
Preference number: 5 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAYHLLC*RHVQEP
Trigger: TGGTTCTTGGACATGTCTCAAGCAGAGTAAATGGTA...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR CAA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCAGCCTATAATTACCAATaGAGAACAGCATGTGCAGTG +
Preference number: 5 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAAYNYQ*RTACAV
Trigger: CACTGCACATGCTGTTCTCAATTGGTAATTATAGGC...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR CAA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCAAAGAGGAAGAGAAACTaGAATAGAGCCATTGACCTT +
Preference number: 5 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAKRKRN*NRAIDL
Trigger: AAGGTCAATGGCTCTATTCAAGTTTCTCTTCCTCTT...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR CAA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCAGATTTATGTGTGTTGTaGAAGTTGTCTGGTCTCTCT +
Preference number: 5 (lower is better)
Translates to: KFVLQFTTRSKNKQHETADLCVL*KLSGLS
Trigger: AGAGAGACCAGACAACTTCAACAACACACATAAATC...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR CAA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCATTGAATAACTGCGACTaGTCCTCAGCTTTTAATGCA +
Preference number: 5 (lower is better)
Translates to: KFVLQFTTRSKNKQHETALNNCD*SSAFNA
Trigger: TGCATTAAAAGCTGAGGACAAGTCGCAGTTATTCAA...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR CAA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCACTATATGAGGAGTTTTaGGCATTGAATAACTGCGAC +
Preference number: 5 (lower is better)
Translates to: KFVLQFTTRSKNKQHETALYEEF*ALNNCD
Trigger: GTCGCAGTTATTCAATGCCAAAAACTCCTCATATAG...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR CAA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCAGCTCCAAAGACTGTGTaGGGTTTCTTGAGTAATTAT +
Preference number: 5 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAAPKTV*GFLSNY
Trigger: ATAATTACTCAAGAAACCCAACACAGTCTTTGGAGC...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR CAA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCATTCCAGATGTTAGTCTaGCTATCTCTTTTGGCTAGT +
Preference number: 5 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAFQMLV*LSLLAS
Trigger: ACTAGCCAAAAGAGATAGCAAGACTAACATCTGGAA...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR CAA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCAGACACACAATCCCCATaGGAGTTAATTTATGGGAAT +
Preference number: 5 (lower is better)
Translates to: KFVLQFTTRSKNKQHETADTQSP*ELIYGN
Trigger: ATTCCCATAAATTAACTCCAATGGGGATTGTGTGTC...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR CAA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCATTTGGTTCACTGAACTaGTTTACATGGTTTGGGTCT +
Preference number: 5 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAFGSLN*FTWFGS
Trigger: AGACCCAAACCATGTAAACAAGTTCAGTGAACCAAA...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR CAA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCAGTTCTAGAAAAGCCCTaGGGATACATCATCTCATTT +
Preference number: 5 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAVLEKP*GYIISF
Trigger: AAATGAGATGATGTATCCCAAGGGCTTTTCTAGAAC...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR CAA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCATTTGAGGGACATCATTaGACCCACAGATCTCTAAAA +
Preference number: 5 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAFEGHH*THRSLK
Trigger: TTTTAGAGATCTGTGGGTCAAATGATGTCCCTCAAA...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR CAA 90 bp CTTTTCCTCCAGAATATATTTTCACACATATTGCAGCAAGAGGAGTCAATTCAACAAATAGCCATATATTaGCTTGGCTTTGCGGGAACA +
Preference number: 5 (lower is better)
Translates to: LFLQNIFSHILQQEESIQQIAIY*LGFAGT
Trigger: TGTTCCCGCAAAGCCAAGCAAATATATGGCTATTTG...TTGAATTGACTCCTCTTGCTGCAATATGTGTGAAAATATATTCTGGAGGAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612606.1
CDS-3UTR CAA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCATATGATTTATGTGTGTaGTTGAAGTTGTCTGGTCTC +
Preference number: 5 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAYDLCV*LKLSGL
Trigger: GAGACCAGACAACTTCAACAACACACATAAATCATA...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR CAA 90 bp AAGTTCGTACTGCAATTTACAACAAGAAGCAAGAATAAACAGCACGAGACAGCACAGAAAAAGCATTCCTaGGTATCTTTCTCTCTGATT +
Preference number: 5 (lower is better)
Translates to: KFVLQFTTRSKNKQHETAQKKHS*VSFSLI
Trigger: AATCAGAGAGAAAGATACCAAGGAATGCTTTTTCTG...TGCTGTCTCGTGCTGTTTATTCTTGCTTCTTGTTGTAAATTGCAGTACGAACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS-3UTR CAA 90 bp TTCCTCCAGAATATATTTTCACACATATTGCAGCAAGAGGAGTCAATTCAATGTAAGAGGAAGAGAAACTaGAATAGAGCCATTGACCTT +
Preference number: 5 (lower is better)
Translates to: FLQNIFSHILQQEESIQCKRKRN*NRAIDL
Trigger: AAGGTCAATGGCTCTATTCAAGTTTCTCTTCCTCTT...ACATTGAATTGACTCCTCTTGCTGCAATATGTGTGAAAATATATTCTGGAGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612606.1
CDS CAA 72 bp CGCCATGGCCTAGAGCCAGAGGGCCGCGGCGGCATATaGCGGGGCTCCGGGCGGCGGCGGGCGCCAGGGCTG +
Preference number: 6 (lower is better)
Translates to: RHGLEPEGRGGI*RGSGRRRAPGL
Trigger: CAGCCCTGGCGCCCGCCGCCGCCCGGAGCCCCGCAATATGCCGCCGCGGCCCTCTGGCTCTAGGCCATGGCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304698.10
ENST00000612606.1
CDS CAA 90 bp GCAGAGCCTCGCCATGGCCTAGAGCCAGAGGGCCGCGGCGGCATATaGCGGGGCTCCGGGCGGCGGCGGGCGCCAGGGCTGCGGGCTCCT +
Preference number: 6 (lower is better)
Translates to: AEPRHGLEPEGRGGI*RGSGRRRAPGLRAP
Trigger: AGGAGCCCGCAGCCCTGGCGCCCGCCGCCGCCCGGAGCCCCGCAATATGCCGCCGCGGCCCTCTGGCTCTAGGCCATGGCGAGGCTCTGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304698.10
ENST00000612606.1
CDS CCA 72 bp GCAGGGTGCAGGGGACACGCCGGCAGAGCCTCGCCATaGCCTAGAGCCAGAGGGCCGCGGCGGCATATTGCG +
Preference number: 6 (lower is better)
Translates to: AGCRGHAGRASP*PRARGPRRHIA
Trigger: CGCAATATGCCGCCGCGGCCCTCTGGCTCTAGGCCATGGCGAGGCTCTGCCGGCGTGTCCCCTGCACCCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304698.10
ENST00000612606.1
CDS GCA 72 bp CTTTCAGCAGCACCACGGCCAGGCCGAGAAGCAGGGTaGAGGGGACACGCCGGCAGAGCCTCGCCATGGCCT +
Preference number: 6 (lower is better)
Translates to: LSAAPRPGREAG*RGHAGRASPWP
Trigger: AGGCCATGGCGAGGCTCTGCCGGCGTGTCCCCTGCACCCTGCTTCTCGGCCTGGCCGTGGTGCTGCTGAAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304698.10
ENST00000612606.1
CDS CAA 90 bp CTGCTTTTGCTGTTGTTGTTGTTGTTGCTGCTGCTGCTGCTGCTGTaGGATGAGGCTGAGGTCGGAGCGGCTGAGTTCCGCTCTGGCGGC +
Preference number: 6 (lower is better)
Translates to: LLLLLLLLLLLLLLL*DEAEVGAAEFRSGG
Trigger: GCCGCCAGAGCGGAACTCAGCCGCTCCGACCTCAGCCTCATCCAACAGCAGCAGCAGCAGCAGCAACAACAACAACAACAGCAAAAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304698.10
ENST00000612606.1
CDS CAA 90 bp CTCCTCCTCAGCCTCCTCCAGCTGCTTTTGCTGTTGTTGTTGTTGTaGCTGCTGCTGCTGCTGCTGTTGGATGAGGCTGAGGTCGGAGCG +
Preference number: 6 (lower is better)
Translates to: LLLSLLQLLLLLLLL*LLLLLLLDEAEVGA
Trigger: CGCTCCGACCTCAGCCTCATCCAACAGCAGCAGCAGCAGCAGCAACAACAACAACAACAGCAAAAGCAGCTGGAGGAGGCTGAGGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304698.10
ENST00000612606.1
CDS CAA 90 bp CCTCTCCTCCTCAGCCTCCTCCAGCTGCTTTTGCTGTTGTTGTTGTaGTTGCTGCTGCTGCTGCTGCTGTTGGATGAGGCTGAGGTCGGA +
Preference number: 6 (lower is better)
Translates to: PLLLSLLQLLLLLLL*LLLLLLLLDEAEVG
Trigger: TCCGACCTCAGCCTCATCCAACAGCAGCAGCAGCAGCAGCAACAACAACAACAACAGCAAAAGCAGCTGGAGGAGGCTGAGGAGGAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304698.10
ENST00000612606.1
CDS CCA 72 bp TGTTGTTGTTGTTGTTGCTGCTGCTGCTGCTGCTGTTaGATGAGGCTGAGGTCGGAGCGGCTGAGTTCCGCT +
Preference number: 6 (lower is better)
Translates to: CCCCCCCCCCCC*MRLRSERLSSA
Trigger: AGCGGAACTCAGCCGCTCCGACCTCAGCCTCATCCAACAGCAGCAGCAGCAGCAGCAACAACAACAACAACA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304698.10
ENST00000612606.1
CDS CAA 90 bp TGTCCTCTCCTCCTCAGCCTCCTCCAGCTGCTTTTGCTGTTGTTGTaGTTGTTGCTGCTGCTGCTGCTGCTGTTGGATGAGGCTGAGGTC +
Preference number: 6 (lower is better)
Translates to: CPLLLSLLQLLLLLL*LLLLLLLLLDEAEV
Trigger: GACCTCAGCCTCATCCAACAGCAGCAGCAGCAGCAGCAACAACAACAACAACAGCAAAAGCAGCTGGAGGAGGCTGAGGAGGAGAGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304698.10
ENST00000612606.1
CDS GCA 72 bp TGCTTTTGCTGTTGTTGTTGTTGTTGCTGCTGCTGCTaGTGCTGTTGGATGAGGCTGAGGTCGGAGCGGCTG +
Preference number: 6 (lower is better)
Translates to: CFCCCCCCCCCC*CCWMRLRSERL
Trigger: CAGCCGCTCCGACCTCAGCCTCATCCAACAGCAGCAGCAGCAGCAGCAACAACAACAACAACAGCAAAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304698.10
ENST00000612606.1
CDS GCA 72 bp AGCTGCTTTTGCTGTTGTTGTTGTTGTTGCTGCTGCTaGTGCTGCTGTTGGATGAGGCTGAGGTCGGAGCGG +
Preference number: 6 (lower is better)
Translates to: SCFCCCCCCCCC*CCCWMRLRSER
Trigger: CCGCTCCGACCTCAGCCTCATCCAACAGCAGCAGCAGCAGCAGCAACAACAACAACAACAGCAAAAGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304698.10
ENST00000612606.1
CDS GCA 72 bp TGCTCCATGATCACTCCACTCCCTCCATCTAGGATGTaGCTTAAAGCTGGGTCCTCAGGGGAACAGACGGTG +
Preference number: 6 (lower is better)
Translates to: CSMITPLPPSRM*LKAGSSGEQTV
Trigger: CACCGTCTGTTCCCCTGAGGACCCAGCTTTAAGGCACATCCTAGATGGAGGGAGTGGAGTGATCATGGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS TCA 72 bp AAGCCTGGGATGGCAGGCTCTGTTGACCTTCAAGTATaGTATCCTCTTCCCTGGCATCTGGGGGCTGTGCAT +
Preference number: 6 (lower is better)
Translates to: KPGMAGSVDLQV*YPLPWHLGAVH
Trigger: ATGCACAGCCCCCAGATGCCAGGGAAGAGGATATCATACTTGAAGGTCAACAGAGCCTGCCATCCCAGGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS GCA 72 bp TTTTGCTGTTGTTGTTGTTGTTGCTGCTGCTGCTGCTaGTGTTGGATGAGGCTGAGGTCGGAGCGGCTGAGT +
Preference number: 6 (lower is better)
Translates to: FCCCCCCCCCCC*CWMRLRSERLS
Trigger: ACTCAGCCGCTCCGACCTCAGCCTCATCCAACAGCAGCAGCAGCAGCAGCAACAACAACAACAACAGCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304698.10
ENST00000612606.1
CDS GCA 72 bp ACAGTGCTTTTCCTTCCTGGCGACTCTTCTCCAGGGTaGTCCATGATCACTCCACTCCCTCCATCTAGGATG +
Preference number: 6 (lower is better)
Translates to: TVLFLPGDSSPG*SMITPLPPSRM
Trigger: CATCCTAGATGGAGGGAGTGGAGTGATCATGGAGCACCCTGGAGAAGAGTCGCCAGGAAGGAAAAGCACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS CAA 72 bp CTCAGCCTCCTCCAGCTGCTTTTGCTGTTGTTGTTGTaGTTGCTGCTGCTGCTGCTGCTGTTGGATGAGGCT +
Preference number: 6 (lower is better)
Translates to: LSLLQLLLLLLL*LLLLLLLLDEA
Trigger: AGCCTCATCCAACAGCAGCAGCAGCAGCAGCAACAACAACAACAACAGCAAAAGCAGCTGGAGGAGGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304698.10
ENST00000612606.1
CDS CAA 72 bp CTCCTCAGCCTCCTCCAGCTGCTTTTGCTGTTGTTGTaGTTGTTGCTGCTGCTGCTGCTGCTGTTGGATGAG +
Preference number: 6 (lower is better)
Translates to: LLSLLQLLLLLL*LLLLLLLLLDE
Trigger: CTCATCCAACAGCAGCAGCAGCAGCAGCAACAACAACAACAACAGCAAAAGCAGCTGGAGGAGGCTGAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304698.10
ENST00000612606.1
CDS CAA 72 bp CTCCTCCTCAGCCTCCTCCAGCTGCTTTTGCTGTTGTaGTTGTTGTTGCTGCTGCTGCTGCTGCTGTTGGAT +
Preference number: 6 (lower is better)
Translates to: LLLSLLQLLLLL*LLLLLLLLLLD
Trigger: ATCCAACAGCAGCAGCAGCAGCAGCAACAACAACAACAACAGCAAAAGCAGCTGGAGGAGGCTGAGGAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304698.10
ENST00000612606.1
CDS CAA 90 bp CCTCATTTAGTGTTCCAGGAACAGAGACGGATTCCAGTAAGCTGCTaGAGTATCGGCTCCAATCTGAAGCCTGGGATGGCAGGCTCTGTT +
Preference number: 6 (lower is better)
Translates to: PHLVFQEQRRIPVSC*SIGSNLKPGMAGSV
Trigger: AACAGAGCCTGCCATCCCAGGCTTCAGATTGGAGCCGATACTCAAGCAGCTTACTGGAATCCGTCTCTGTTCCTGGAACACTAAATGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS CCA 72 bp TGTGCCTTAAAGCTGGGTCCTCAGGGGAACAGACGGTaGTTCCACTCTCACTGCTGCTTAGGTCTAAATCTT +
Preference number: 6 (lower is better)
Translates to: CALKLGPQGNRR*FHSHCCLGLNL
Trigger: AAGATTTAGACCTAAGCAGCAGTGAGAGTGGAACCACCGTCTGTTCCCCTGAGGACCCAGCTTTAAGGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS CAA 72 bp AGTGGGCGTTCCTCTCGCTTCTTCCAGATGTTAGTCTaGCTATCTCTTTTGGCTAGTGGTGGTCTGCCCCTT +
Preference number: 6 (lower is better)
Translates to: SGRSSRFFQMLV*LSLLASGGLPL
Trigger: AAGGGGCAGACCACCACTAGCCAAAAGAGATAGCAAGACTAACATCTGGAAGAAGCGAGAGGAACGCCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS CCA 72 bp AGTGAAGCTCATTCATGTCCACCCCAGAGTCCAGACTaGTGTCATTGCTCTGGGTTCTCTTGCCCTTTTTCA +
Preference number: 6 (lower is better)
Translates to: SEAHSCPPQSPD*CHCSGFSCPFS
Trigger: TGAAAAAGGGCAAGAGAACCCAGAGCAATGACACCAGTCTGGACTCTGGGGTGGACATGAATGAGCTTCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS GCA 72 bp AAGTATGATATCCTCTTCCCTGGCATCTGGGGGCTGTaGATGAGAATGAATTGGCATTTTGGGCAAGGTCTG +
Preference number: 6 (lower is better)
Translates to: KYDILFPGIWGL*MRMNWHFGQGL
Trigger: CAGACCTTGCCCAAAATGCCAATTCATTCTCATGCACAGCCCCCAGATGCCAGGGAAGAGGATATCATACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS GCA 72 bp GCCCTTTTTCAGGTCTATAAAGGAGTGCCTCACTTGTaGAACTGGCTTTCCATCAAGAGACACAAACCAGGC +
Preference number: 6 (lower is better)
Translates to: ALFQVYKGVPHL*NWLSIKRHKPG
Trigger: GCCTGGTTTGTGTCTCTTGATGGAAAGCCAGTTGCACAAGTGAGGCACTCCTTTATAGACCTGAAAAAGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS GCA 72 bp CCTCAGGGGAACAGACGGTGGTTCCACTCTCACTGCTaGTTAGGTCTAAATCTTCTAAGTAAAGGATCTTGG +
Preference number: 6 (lower is better)
Translates to: PQGNRRWFHSHC*LGLNLLSKGSW
Trigger: CCAAGATCCTTTACTTAGAAGATTTAGACCTAAGCAGCAGTGAGAGTGGAACCACCGTCTGTTCCCCTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS GCA 72 bp GGTCCTCAGGGGAACAGACGGTGGTTCCACTCTCACTaGTGCTTAGGTCTAAATCTTCTAAGTAAAGGATCT +
Preference number: 6 (lower is better)
Translates to: GPQGNRRWFHSH*CLGLNLLSKGS
Trigger: AGATCCTTTACTTAGAAGATTTAGACCTAAGCAGCAGTGAGAGTGGAACCACCGTCTGTTCCCCTGAGGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS CCA 72 bp TTTCAGGTCTATAAAGGAGTGCCTCACTTGTGCAACTaGCTTTCCATCAAGAGACACAAACCAGGCTCTGGG +
Preference number: 6 (lower is better)
Translates to: FQVYKGVPHLCN*LSIKRHKPGSG
Trigger: CCCAGAGCCTGGTTTGTGTCTCTTGATGGAAAGCCAGTTGCACAAGTGAGGCACTCCTTTATAGACCTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS CCA 72 bp GACAGCAGACACACAATCCCCATTGGAGTTAATTTATaGGAATCAGTGGGCGTTCCTCTCGCTTCTTCCAGA +
Preference number: 6 (lower is better)
Translates to: DSRHTIPIGVNL*ESVGVPLASSR
Trigger: TCTGGAAGAAGCGAGAGGAACGCCCACTGATTCCCATAAATTAACTCCAATGGGGATTGTGTGTCTGCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS CAA 90 bp AGAAGCAAGAATAAACAGCACGAGACAGCAGACACACAATCCCCATaGGAGTTAATTTATGGGAATCAGTGGGCGTTCCTCTCGCTTCTT +
Preference number: 6 (lower is better)
Translates to: RSKNKQHETADTQSP*ELIYGNQWAFLSLL
Trigger: AAGAAGCGAGAGGAACGCCCACTGATTCCCATAAATTAACTCCAATGGGGATTGTGTGTCTGCTGTCTCGTGCTGTTTATTCTTGCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS CAA 72 bp CTTGCCCTTTTTCAGGTCTATAAAGGAGTGCCTCACTaGTGCAACTGGCTTTCCATCAAGAGACACAAACCA +
Preference number: 6 (lower is better)
Translates to: LALFQVYKGVPH*CNWLSIKRHKP
Trigger: TGGTTTGTGTCTCTTGATGGAAAGCCAGTTGCACAAGTGAGGCACTCCTTTATAGACCTGAAAAAGGGCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS CAA 72 bp AATAAACAGCACGAGACAGCAGACACACAATCCCCATaGGAGTTAATTTATGGGAATCAGTGGGCGTTCCTC +
Preference number: 6 (lower is better)
Translates to: NKQHETADTQSP*ELIYGNQWAFL
Trigger: GAGGAACGCCCACTGATTCCCATAAATTAACTCCAATGGGGATTGTGTGTCTGCTGTCTCGTGCTGTTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS GCA 72 bp AAGCACCTGTGTTCATATCAAATGTCCAAGCAGGTATaGGATCCCCTGCACTTATATCATTCAGACGTAGAA +
Preference number: 6 (lower is better)
Translates to: KHLCSYQMSKQV*DPLHLYHSDVE
Trigger: TTCTACGTCTGAATGATATAAGTGCAGGGGATCGCATACCTGCTTGGACATTTGATATGAACACAGGTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS CAA 90 bp TGTGGAATTTGTCTTCGTGTAGTTTACAAACACTTCTACAACTGCTaGGCTCAGGTACTGACGACTGATGATGTCATTCACCTGGACTTT +
Preference number: 6 (lower is better)
Translates to: CGICLRVVYKHFYNC*AQVLTTDDVIHLDF
Trigger: AAAGTCCAGGTGAATGACATCATCAGTCGTCAGTACCTGAGCCAAGCAGTTGTAGAAGTGTTTGTAAACTACACGAAGACAAATTCCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304698.10
ENST00000612606.1
CDS TCA 72 bp CATCATATGTCCAGATTAAATGATTGTTATGTTCCTTaGCCATTCCCCGACCATGATTTACCCAAGCACCTG +
Preference number: 6 (lower is better)
Translates to: HHMSRLNDCYVP*PFPDHDLPKHL
Trigger: CAGGTGCTTGGGTAAATCATGGTCGGGGAATGGTCAAGGAACATAACAATCATTTAATCTGGACATATGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS GCA 72 bp ATTTGTCTTCGTGTAGTTTACAAACACTTCTACAACTaGTTGGCTCAGGTACTGACGACTGATGATGTCATT +
Preference number: 6 (lower is better)
Translates to: ICLRVVYKHFYN*LAQVLTTDDVI
Trigger: AATGACATCATCAGTCGTCAGTACCTGAGCCAAGCAGTTGTAGAAGTGTTTGTAAACTACACGAAGACAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304698.10
ENST00000612606.1
CDS CAA 72 bp GATGAAGATAGATTGTTGTTAATATGTTTAGGTTGTTaGGACCCTACATTGGGCTCCAAAGACTGTGTTGGG +
Preference number: 6 (lower is better)
Translates to: DEDRLLLICLGC*DPTLGSKDCVG
Trigger: CCCAACACAGTCTTTGGAGCCCAATGTAGGGTCCAAACAACCTAAACATATTAACAACAATCTATCTTCATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS TCA 72 bp CTTATATCATTCAGACGTAGAAGAGGAAGAGAAACTTaGATAGAGCCATTGACCTTTAGTTCTTTTCCTCCA +
Preference number: 6 (lower is better)
Translates to: LISFRRRRGRET*IEPLTFSSFPP
Trigger: TGGAGGAAAAGAACTAAAGGTCAATGGCTCTATTCAAGTTTCTCTTCCTCTTCTACGTCTGAATGATATAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS TCA 72 bp AACTTTAACTGTACTGATATGATTTATGTGTGTTGTTaGAGTTGTCTGGTCTCTCTTGAGGACCTCAAGTTT +
Preference number: 6 (lower is better)
Translates to: NFNCTDMIYVCC*SCLVSLEDLKF
Trigger: AAACTTGAGGTCCTCAAGAGAGACCAGACAACTTCAACAACACACATAAATCATATCAGTACAGTTAAAGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304698.10
CDS CCA 72 bp ATTAAAACAGTGTCTTCAAATAGCCATATATTTGCTTaGCTTTGCGGGAACAGTGAAAGTGTAACTGATGAA +
Preference number: 6 (lower is better)
Translates to: IKTVSSNSHIFA*LCGNSESVTDE
Trigger: TTCATCAGTTACACTTTCACTGTTCCCGCAAAGCCAAGCAAATATATGGCTATTTGAAGACACTGTTTTAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304698.10
ENST00000612606.1