Pregenerated sensors for FAM170B (Homo sapiens)
Ensembl gene IDs: ENSG00000172538Ensembl transcript IDs: ENST00000311787.6
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGAGATGCTGTGCCTAGGGCAGGAAGGGGGTTCCTTCCAGTCTCCTaGCCCTCCTTGCTCTACACTCCATGCCTTTCCTTCCCCCTGACC | + |
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Preference number: 1 (lower is better) Translates to: GDAVPRAGRGFLPVS*PSLLYTPCLSFPLT Trigger: GGTCAGGGGGAAGGAAAGGCATGGAGTGTAGAGCAAGGAGGGCCAGGAGACTGGAAGGAACCCCCTTCCTGCCCTAGGCACAGCATCTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| 3UTR GCA 90 bp | AGCCCTCTCGTTTGGGTTTTGAAATGGACTCTGGTGGAGATGCTGTaGCTAGGGCAGGAAGGGGGTTCCTTCCAGTCTCCTGGCCCTCCT | + |
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Preference number: 1 (lower is better) Translates to: SPLVWVLKWTLVEML*LGQEGGSFQSPGPP Trigger: AGGAGGGCCAGGAGACTGGAAGGAACCCCCTTCCTGCCCTAGGCACAGCATCTCCACCAGAGTCCATTTCAAAACCCAAACGAGAGGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| 3UTR TCA 90 bp | TGGCTGTCCTGTGACCCACATATACTTAGCAAGTGTGGACCTGCCTaGTCCACCGGCAAAAATAGAAATCCCTCTGGCCATGCGTTTGTG | + |
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Preference number: 1 (lower is better) Translates to: WLSCDPHILSKCGPA*STGKNRNPSGHAFV Trigger: CACAAACGCATGGCCAGAGGGATTTCTATTTTTGCCGGTGGATCAGGCAGGTCCACACTTGCTAAGTATATGTGGGTCACAGGACAGCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| 3UTR CCA 90 bp | TCAGATGTTGTGCCTGCCATCAGAAACACTCAAAGCCCTCTCGTTTaGGTTTTGAAATGGACTCTGGTGGAGATGCTGTGCCTAGGGCAG | + |
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Preference number: 1 (lower is better) Translates to: SDVVPAIRNTQSPLV*VLKWTLVEMLCLGQ Trigger: CTGCCCTAGGCACAGCATCTCCACCAGAGTCCATTTCAAAACCCAAACGAGAGGGCTTTGAGTGTTTCTGATGGCAGGCACAACATCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| 3UTR CCA 90 bp | CCTGATCCACCGGCAAAAATAGAAATCCCTCTGGCCATGCGTTTGTaGGTTTCAGATGTTGTGCCTGCCATCAGAAACACTCAAAGCCCT | + |
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Preference number: 1 (lower is better) Translates to: PDPPAKIEIPLAMRL*VSDVVPAIRNTQSP Trigger: AGGGCTTTGAGTGTTTCTGATGGCAGGCACAACATCTGAAACCCACAAACGCATGGCCAGAGGGATTTCTATTTTTGCCGGTGGATCAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| 3UTR GCA 90 bp | AGAAATCCCTCTGGCCATGCGTTTGTGGGTTTCAGATGTTGTGCCTaGCATCAGAAACACTCAAAGCCCTCTCGTTTGGGTTTTGAAATG | + |
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Preference number: 1 (lower is better) Translates to: RNPSGHAFVGFRCCA*HQKHSKPSRLGFEM Trigger: CATTTCAAAACCCAAACGAGAGGGCTTTGAGTGTTTCTGATGGCAGGCACAACATCTGAAACCCACAAACGCATGGCCAGAGGGATTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| 3UTR-3UTR GCA 90 bp | AGTGTGGACCTGCCTGATCCACCGGCAAAAATAGAAATCCCTCTGGCCATGCGTCTGGTGGAGATGCTGTaGCTAGGGCAGGAAGGGGGT | + |
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Preference number: 2 (lower is better) Translates to: SVDLPDPPAKIEIPLAMRLVEML*LGQEGG Trigger: ACCCCCTTCCTGCCCTAGGCACAGCATCTCCACCAG...ACGCATGGCCAGAGGGATTTCTATTTTTGCCGGTGGATCAGGCAGGTCCACACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| 3UTR-3UTR CCA 90 bp | AGCCCTCTCGTTTGGGTTTTGAAATGGACTCTGGTGGAGATGCTGTGCCTAGGGTCTGATACTGCTGGCTaGGGAAGGAGCAGTCCCAGG | + |
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Preference number: 2 (lower is better) Translates to: SPLVWVLKWTLVEMLCLGSDTAG*GRSSPR Trigger: CCTGGGACTGCTCCTTCCCCAGCCAGCAGTATCAGA...CCCTAGGCACAGCATCTCCACCAGAGTCCATTTCAAAACCCAAACGAGAGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| 3UTR-3UTR GCA 90 bp | TCTCGTTTGGGTTTTGAAATGGACTCTGGTGGAGATGCTGTGCCTAGGGCAGGATCTCCTGGCCCTCCTTaGTCTACACTCCATGCCTTT | + |
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Preference number: 2 (lower is better) Translates to: SRLGFEMDSGGDAVPRAGSPGPP*STLHAF Trigger: AAAGGCATGGAGTGTAGAGCAAGGAGGGCCAGGAGA...TCCTGCCCTAGGCACAGCATCTCCACCAGAGTCCATTTCAAAACCCAAACGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| 3UTR-3UTR CCA 90 bp | TTTGCAGTTGGCTGTCCTGTGACCCACATATACTTAGCAAGTGTGGACCTGCCTTTCCTTCCAGTCTCCTaGCCCTCCTTGCTCTACACT | + |
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Preference number: 2 (lower is better) Translates to: FAVGCPVTHIYLASVDLPFLPVS*PSLLYT Trigger: AGTGTAGAGCAAGGAGGGCCAGGAGACTGGAAGGAA...AGGCAGGTCCACACTTGCTAAGTATATGTGGGTCACAGGACAGCCAACTGCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| 3UTR CAA 90 bp | TTCAGATGTTGTGCCTGCCATCAGAAACACTCAAAGCCCTCTCGTTaGGGTTTTGAAATGGACTCTGGTGGAGATGCTGTGCCTAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: FRCCACHQKHSKPSR*GFEMDSGGDAVPRA Trigger: TGCCCTAGGCACAGCATCTCCACCAGAGTCCATTTCAAAACCCAAACGAGAGGGCTTTGAGTGTTTCTGATGGCAGGCACAACATCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| 3UTR CAA 90 bp | CTGCCTGATCCACCGGCAAAAATAGAAATCCCTCTGGCCATGCGTTaGTGGGTTTCAGATGTTGTGCCTGCCATCAGAAACACTCAAAGC | + |
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Preference number: 2 (lower is better) Translates to: LPDPPAKIEIPLAMR*WVSDVVPAIRNTQS Trigger: GCTTTGAGTGTTTCTGATGGCAGGCACAACATCTGAAACCCACAAACGCATGGCCAGAGGGATTTCTATTTTTGCCGGTGGATCAGGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| 3UTR-3UTR GCA 90 bp | GCAGTTGGCTGTCCTGTGACCCACATATACTTAGCAAGTGTGGACCTGCCTGATGGGTTTCAGATGTTGTaGCTGCCATCAGAAACACTC | + |
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Preference number: 2 (lower is better) Translates to: AVGCPVTHIYLASVDLPDGFQML*LPSETL Trigger: GAGTGTTTCTGATGGCAGGCACAACATCTGAAACCC...ATCAGGCAGGTCCACACTTGCTAAGTATATGTGGGTCACAGGACAGCCAACTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| 3UTR-3UTR CCA 90 bp | GTTGGCTGTCCTGTGACCCACATATACTTAGCAAGTGTGGACCTGCCTGATCCACAAAGCCCTCTCGTTTaGGTTTTGAAATGGACTCTG | + |
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Preference number: 2 (lower is better) Translates to: VGCPVTHIYLASVDLPDPQSPLV*VLKWTL Trigger: CAGAGTCCATTTCAAAACCCAAACGAGAGGGCTTTG...TGGATCAGGCAGGTCCACACTTGCTAAGTATATGTGGGTCACAGGACAGCCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| 3UTR-3UTR GCA 90 bp | TTAGCAAGTGTGGACCTGCCTGATCCACCGGCAAAAATAGAAATCCCTCTGGCCTTCAGATGTTGTGCCTaGCATCAGAAACACTCAAAG | + |
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Preference number: 2 (lower is better) Translates to: LASVDLPDPPAKIEIPLAFRCCA*HQKHSK Trigger: CTTTGAGTGTTTCTGATGGCAGGCACAACATCTGAA...GGCCAGAGGGATTTCTATTTTTGCCGGTGGATCAGGCAGGTCCACACTTGCTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| 3UTR-3UTR CCA 90 bp | AATAGAAATCCCTCTGGCCATGCGTTTGTGGGTTTCAGATGTTGTGCCTGCCATGTTTGGGTTTTGAAATaGACTCTGGTGGAGATGCTG | + |
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Preference number: 2 (lower is better) Translates to: NRNPSGHAFVGFRCCACHVWVLK*TLVEML Trigger: CAGCATCTCCACCAGAGTCCATTTCAAAACCCAAAC...ATGGCAGGCACAACATCTGAAACCCACAAACGCATGGCCAGAGGGATTTCTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| 3UTR CCA 72 bp | GTGCCTAGGGCAGGAAGGGGGTTCCTTCCAGTCTCCTaGCCCTCCTTGCTCTACACTCCATGCCTTTCCTTC | + |
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Preference number: 3 (lower is better) Translates to: VPRAGRGFLPVS*PSLLYTPCLSF Trigger: GAAGGAAAGGCATGGAGTGTAGAGCAAGGAGGGCCAGGAGACTGGAAGGAACCCCCTTCCTGCCCTAGGCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| 3UTR GCA 72 bp | GTTTGGGTTTTGAAATGGACTCTGGTGGAGATGCTGTaGCTAGGGCAGGAAGGGGGTTCCTTCCAGTCTCCT | + |
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Preference number: 3 (lower is better) Translates to: VWVLKWTLVEML*LGQEGGSFQSP Trigger: AGGAGACTGGAAGGAACCCCCTTCCTGCCCTAGGCACAGCATCTCCACCAGAGTCCATTTCAAAACCCAAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| 3UTR GCA 72 bp | TCTGGCCATGCGTTTGTGGGTTTCAGATGTTGTGCCTaGCATCAGAAACACTCAAAGCCCTCTCGTTTGGGT | + |
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Preference number: 3 (lower is better) Translates to: SGHAFVGFRCCA*HQKHSKPSRLG Trigger: ACCCAAACGAGAGGGCTTTGAGTGTTTCTGATGGCAGGCACAACATCTGAAACCCACAAACGCATGGCCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| 3UTR GCA 72 bp | TCCCTCTGGCCATGCGTTTGTGGGTTTCAGATGTTGTaGCTGCCATCAGAAACACTCAAAGCCCTCTCGTTT | + |
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Preference number: 3 (lower is better) Translates to: SLWPCVCGFQML*LPSETLKALSF Trigger: AAACGAGAGGGCTTTGAGTGTTTCTGATGGCAGGCACAACATCTGAAACCCACAAACGCATGGCCAGAGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| 3UTR CCA 72 bp | GTGCCTGCCATCAGAAACACTCAAAGCCCTCTCGTTTaGGTTTTGAAATGGACTCTGGTGGAGATGCTGTGC | + |
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Preference number: 3 (lower is better) Translates to: VPAIRNTQSPLV*VLKWTLVEMLC Trigger: GCACAGCATCTCCACCAGAGTCCATTTCAAAACCCAAACGAGAGGGCTTTGAGTGTTTCTGATGGCAGGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| 3UTR TCA 72 bp | TGTGACCCACATATACTTAGCAAGTGTGGACCTGCCTaGTCCACCGGCAAAAATAGAAATCCCTCTGGCCAT | + |
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Preference number: 3 (lower is better) Translates to: CDPHILSKCGPA*STGKNRNPSGH Trigger: ATGGCCAGAGGGATTTCTATTTTTGCCGGTGGATCAGGCAGGTCCACACTTGCTAAGTATATGTGGGTCACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| 3UTR CCA 72 bp | CCGGCAAAAATAGAAATCCCTCTGGCCATGCGTTTGTaGGTTTCAGATGTTGTGCCTGCCATCAGAAACACT | + |
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Preference number: 3 (lower is better) Translates to: PAKIEIPLAMRL*VSDVVPAIRNT Trigger: AGTGTTTCTGATGGCAGGCACAACATCTGAAACCCACAAACGCATGGCCAGAGGGATTTCTATTTTTGCCGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS-3UTR GCA 90 bp | GCAGGAAGGGGGTTCCTTCCAGTCTCCTGGCCCTCCTTGCTCTACACTCCATGCTGCCCAGGGTGTCGGTaGTCCAGCTGTTCAGTGAGA | + |
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Preference number: 4 (lower is better) Translates to: AGRGFLPVSWPSLLYTPCCPGCR*SSCSVR Trigger: TCTCACTGAACAGCTGGAGCACCGACACCCTGGGCA...GCATGGAGTGTAGAGCAAGGAGGGCCAGGAGACTGGAAGGAACCCCCTTCCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS-3UTR TCA 90 bp | GCAGTTGGCTGTCCTGTGACCCACATATACTTAGCAAGTGTGGACCTGCCTGATCCCCGTAGTTGGTGGTaGCCAGCCAGTCCGGCGGCT | + |
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Preference number: 4 (lower is better) Translates to: AVGCPVTHIYLASVDLPDPRSWW*PASPAA Trigger: AGCCGCCGGACTGGCTGGTCACCACCAACTACGGGG...ATCAGGCAGGTCCACACTTGCTAAGTATATGTGGGTCACAGGACAGCCAACTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS-3UTR CCA 90 bp | GCAGGAAGGGGGTTCCTTCCAGTCTCCTGGCCCTCCTTGCTCTACACTCCATGCTCAGTGAGAGTTGGCTaGGGCTGTACTGAAGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: AGRGFLPVSWPSLLYTPCSVRVG*GCTEGL Trigger: GAGGCCTTCAGTACAGCCCCAGCCAACTCTCACTGA...GCATGGAGTGTAGAGCAAGGAGGGCCAGGAGACTGGAAGGAACCCCCTTCCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS-3UTR CCA 90 bp | GCAGGAAGGGGGTTCCTTCCAGTCTCCTGGCCCTCCTTGCTCTACACTCCATGCATGAACTGGGCTTCATaGATGCGGGGCTTCCTGGTG | + |
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Preference number: 4 (lower is better) Translates to: AGRGFLPVSWPSLLYTPCMNWAS*MRGFLV Trigger: CACCAGGAAGCCCCGCATCCATGAAGCCCAGTTCAT...GCATGGAGTGTAGAGCAAGGAGGGCCAGGAGACTGGAAGGAACCCCCTTCCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS-3UTR TCA 90 bp | GTTGTGCCTGCCATCAGAAACACTCAAAGCCCTCTCGTTTGGGTTTTGAAATGGTGCGGGGCTTCCTGGTaGCCGGCTCGAAGCCGGCCT | + |
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Preference number: 4 (lower is better) Translates to: VVPAIRNTQSPLVWVLKWCGASW*PARSRP Trigger: AGGCCGGCTTCGAGCCGGTCACCAGGAAGCCCCGCA...CCATTTCAAAACCCAAACGAGAGGGCTTTGAGTGTTTCTGATGGCAGGCACAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS-3UTR CCA 90 bp | TTAGCAAGTGTGGACCTGCCTGATCCACCGGCAAAAATAGAAATCCCTCTGGCCTCCCGGATGCCATGCTaGGCGTGCTCCAGCAGAGCG | + |
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Preference number: 4 (lower is better) Translates to: LASVDLPDPPAKIEIPLASRMPC*ACSSRA Trigger: CGCTCTGCTGGAGCACGCCCAGCATGGCATCCGGGA...GGCCAGAGGGATTTCTATTTTTGCCGGTGGATCAGGCAGGTCCACACTTGCTAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS-3UTR TCA 90 bp | GCAAGTGTGGACCTGCCTGATCCACCGGCAAAAATAGAAATCCCTCTGGCCATGGGTCCCATCGGTGGGTaGCTGTTCTCCCCTGTGATC | + |
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Preference number: 4 (lower is better) Translates to: ASVDLPDPPAKIEIPLAMGPIGG*LFSPVI Trigger: GATCACAGGGGAGAACAGTCACCCACCGATGGGACC...CATGGCCAGAGGGATTTCTATTTTTGCCGGTGGATCAGGCAGGTCCACACTTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS-3UTR TCA 90 bp | GTTGGCTGTCCTGTGACCCACATATACTTAGCAAGTGTGGACCTGCCTGATCCATCATGTGCTTGGCCCTaGGCCCGCCTTCTCTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: VGCPVTHIYLASVDLPDPSCAWP*ARLLSS Trigger: GCTGGAGAGAAGGCGGGCTCAGGGCCAAGCACATGA...TGGATCAGGCAGGTCCACACTTGCTAAGTATATGTGGGTCACAGGACAGCCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS-3UTR GCA 90 bp | TTAGCAAGTGTGGACCTGCCTGATCCACCGGCAAAAATAGAAATCCCTCTGGCCATGCCATGCTGGGCGTaGTCCAGCAGAGCGTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LASVDLPDPPAKIEIPLAMPCWA*SSRASR Trigger: CCTGGACGCTCTGCTGGAGCACGCCCAGCATGGCAT...GGCCAGAGGGATTTCTATTTTTGCCGGTGGATCAGGCAGGTCCACACTTGCTAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS-3UTR GCA 90 bp | GTGGGTTTCAGATGTTGTGCCTGCCATCAGAAACACTCAAAGCCCTCTCGTTTGCCCTCCCGGATGCCATaGTGGGCGTGCTCCAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: VGFRCCACHQKHSKPSRLPSRMP*WACSSR Trigger: TCTGCTGGAGCACGCCCAGCATGGCATCCGGGAGGG...CAAACGAGAGGGCTTTGAGTGTTTCTGATGGCAGGCACAACATCTGAAACCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS-3UTR GCA 90 bp | GTAATTTGCAGTTGGCTGTCCTGTGACCCACATATACTTAGCAAGTGTGGACCTGGGAGGGCAAGACCCTaGAGCAGGCCACGCAGCGCA | + |
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Preference number: 4 (lower is better) Translates to: VICSWLSCDPHILSKCGPGRARP*SRPRSA Trigger: TGCGCTGCGTGGCCTGCTGCAGGGTCTTGCCCTCCC...AGGTCCACACTTGCTAAGTATATGTGGGTCACAGGACAGCCAACTGCAAATTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS-3UTR GCA 90 bp | GCAGTTGGCTGTCCTGTGACCCACATATACTTAGCAAGTGTGGACCTGCCTGATCTGGTGGAGATGCTGTaGCTAGGGCAGGAAGGGGGT | + |
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Preference number: 4 (lower is better) Translates to: AVGCPVTHIYLASVDLPDLVEML*LGQEGG Trigger: ACCCCCTTCCTGCCCTAGGCACAGCATCTCCACCAG...ATCAGGCAGGTCCACACTTGCTAAGTATATGTGGGTCACAGGACAGCCAACTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS-3UTR CCA 90 bp | GCAGTTGGCTGTCCTGTGACCCACATATACTTAGCAAGTGTGGACCTGCCTGATGGGTGGTCCCATCGGTaGGTGACTGTTCTCCCCTGT | + |
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Preference number: 4 (lower is better) Translates to: AVGCPVTHIYLASVDLPDGWSHR*VTVLPC Trigger: ACAGGGGAGAACAGTCACCCACCGATGGGACCACCC...ATCAGGCAGGTCCACACTTGCTAAGTATATGTGGGTCACAGGACAGCCAACTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS-3UTR CCA 90 bp | AATAGAAATCCCTCTGGCCATGCGTTTGTGGGTTTCAGATGTTGTGCCTGCCATGCATCCCCCGGTCCCTaGCAGCGAAGTAGAGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: NRNPSGHAFVGFRCCACHASPGP*QRSRGP Trigger: AGGGCCTCTACTTCGCTGCCAGGGACCGGGGGATGC...ATGGCAGGCACAACATCTGAAACCCACAAACGCATGGCCAGAGGGATTTCTATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS-3UTR CCA 90 bp | GTGCCTAGGGCAGGAAGGGGGTTCCTTCCAGTCTCCTGGCCCTCCTTGCTCTACCAAAGCCCTCTCGTTTaGGTTTTGAAATGGACTCTG | + |
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Preference number: 4 (lower is better) Translates to: VPRAGRGFLPVSWPSLLYQSPLV*VLKWTL Trigger: CAGAGTCCATTTCAAAACCCAAACGAGAGGGCTTTG...GTAGAGCAAGGAGGGCCAGGAGACTGGAAGGAACCCCCTTCCTGCCCTAGGCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS-3UTR TCA 90 bp | CAGAAACACTCAAAGCCCTCTCGTTTGGGTTTTGAAATGGACTCTGGTGGAGATCAGGGCTGGTCAAGCTaGGGGTGGTCCCATCGGTGG | + |
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Preference number: 4 (lower is better) Translates to: QKHSKPSRLGFEMDSGGDQGWSS*GWSHRW Trigger: CCACCGATGGGACCACCCTCAGCTTGACCAGCCCTG...ATCTCCACCAGAGTCCATTTCAAAACCCAAACGAGAGGGCTTTGAGTGTTTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS-3UTR GCA 90 bp | GACCTGCCTGATCCACCGGCAAAAATAGAAATCCCTCTGGCCATGCGTTTGTGGTGTCCTCATCGCACATaGAGGAGCAGCACGACTGGT | + |
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Preference number: 4 (lower is better) Translates to: DLPDPPAKIEIPLAMRLWCPHRT*RSSTTG Trigger: ACCAGTCGTGCTGCTCCTGCATGTGCGATGAGGACA...CCACAAACGCATGGCCAGAGGGATTTCTATTTTTGCCGGTGGATCAGGCAGGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS-3UTR CCA 90 bp | CCACCGGCAAAAATAGAAATCCCTCTGGCCATGCGTTTGTGGGTTTCAGATGTTCTGAAGGCCTCCAGCTaGCCCCAGCCAGAGTGGACA | + |
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Preference number: 4 (lower is better) Translates to: PPAKIEIPLAMRLWVSDVLKASS*PQPEWT Trigger: TGTCCACTCTGGCTGGGGCCAGCTGGAGGCCTTCAG...AACATCTGAAACCCACAAACGCATGGCCAGAGGGATTTCTATTTTTGCCGGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS-3UTR CCA 90 bp | GCAGTTGGCTGTCCTGTGACCCACATATACTTAGCAAGTGTGGACCTGCCTGATCCACACTCTCCTCAGTaGACTCAGGGCTGGTCAAGC | + |
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Preference number: 4 (lower is better) Translates to: AVGCPVTHIYLASVDLPDPHSPQ*TQGWSS Trigger: GCTTGACCAGCCCTGAGTCCACTGAGGAGAGTGTGG...ATCAGGCAGGTCCACACTTGCTAAGTATATGTGGGTCACAGGACAGCCAACTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS-3UTR CCA 90 bp | GTTGGCTGTCCTGTGACCCACATATACTTAGCAAGTGTGGACCTGCCTGATCCATCTGATACTGCTGGCTaGGGAAGGAGCAGTCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: VGCPVTHIYLASVDLPDPSDTAG*GRSSPR Trigger: CCTGGGACTGCTCCTTCCCCAGCCAGCAGTATCAGA...TGGATCAGGCAGGTCCACACTTGCTAAGTATATGTGGGTCACAGGACAGCCAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS-3UTR GCA 90 bp | AATAGAAATCCCTCTGGCCATGCGTTTGTGGGTTTCAGATGTTGTGCCTGCCATCAGCTGTTGGTCATGTaGTTGGCCCTGAGCCCGCCT | + |
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Preference number: 4 (lower is better) Translates to: NRNPSGHAFVGFRCCACHQLLVM*LALSPP Trigger: AGGCGGGCTCAGGGCCAAGCACATGACCAACAGCTG...ATGGCAGGCACAACATCTGAAACCCACAAACGCATGGCCAGAGGGATTTCTATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS-3UTR GCA 90 bp | TTTGCAGTTGGCTGTCCTGTGACCCACATATACTTAGCAAGTGTGGACCTGCCTTCCCCTCTGGCTCACTaGTTCTCCTGCTGCTGTGCT | + |
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Preference number: 4 (lower is better) Translates to: FAVGCPVTHIYLASVDLPSPLAH*FSCCCA Trigger: AGCACAGCAGCAGGAGAAGCAGTGAGCCAGAGGGGA...AGGCAGGTCCACACTTGCTAAGTATATGTGGGTCACAGGACAGCCAACTGCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS-3UTR CCA 90 bp | GCAGTTGGCTGTCCTGTGACCCACATATACTTAGCAAGTGTGGACCTGCCTGATTGCCTCTTGATGAACTaGGCTTCATGGATGCGGGGC | + |
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Preference number: 4 (lower is better) Translates to: AVGCPVTHIYLASVDLPDCLLMN*ASWMRG Trigger: GCCCCGCATCCATGAAGCCCAGTTCATCAAGAGGCA...ATCAGGCAGGTCCACACTTGCTAAGTATATGTGGGTCACAGGACAGCCAACTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS-3UTR CCA 90 bp | TTAGCAAGTGTGGACCTGCCTGATCCACCGGCAAAAATAGAAATCCCTCTGGCCTGGGTATCTCCCCTCTaGCTCACTGCTTCTCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: LASVDLPDPPAKIEIPLAWVSPL*LTASPA Trigger: AGCAGGAGAAGCAGTGAGCCAGAGGGGAGATACCCA...GGCCAGAGGGATTTCTATTTTTGCCGGTGGATCAGGCAGGTCCACACTTGCTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS-3UTR TCA 90 bp | GTAATTTGCAGTTGGCTGTCCTGTGACCCACATATACTTAGCAAGTGTGGACCTGTACTCGGAGGACTCTaGGGATGGGGAGCTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VICSWLSCDPHILSKCGPVLGGL*GWGAAP Trigger: TGGAGCAGCTCCCCATCCTCAGAGTCCTCCGAGTAC...AGGTCCACACTTGCTAAGTATATGTGGGTCACAGGACAGCCAACTGCAAATTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS-3UTR GCA 90 bp | ATCAGAAACACTCAAAGCCCTCTCGTTTGGGTTTTGAAATGGACTCTGGTGGAGGGCTGCAGTTGCTCTTaGAGGCTTCCAGGTCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: IRNTQSPLVWVLKWTLVEGCSCS*RLPGPS Trigger: GCTGGGACCTGGAAGCCTGCAAGAGCAACTGCAGCC...CTCCACCAGAGTCCATTTCAAAACCCAAACGAGAGGGCTTTGAGTGTTTCTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS-3UTR GCA 90 bp | GTTGGCTGTCCTGTGACCCACATATACTTAGCAAGTGTGGACCTGCCTGATCCATTGTCTGAAGGACTCTaGTCCTCCTCCAGCTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VGCPVTHIYLASVDLPDPLSEGL*SSSSCW Trigger: CCAACAGCTGGAGGAGGAGCAGAGTCCTTCAGACAA...TGGATCAGGCAGGTCCACACTTGCTAAGTATATGTGGGTCACAGGACAGCCAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS-3UTR GCA 90 bp | TTAGCAAGTGTGGACCTGCCTGATCCACCGGCAAAAATAGAAATCCCTCTGGCCTCTCCTGGCCCTCCTTaGTCTACACTCCATGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LASVDLPDPPAKIEIPLASPGPP*STLHAF Trigger: AAAGGCATGGAGTGTAGAGCAAGGAGGGCCAGGAGA...GGCCAGAGGGATTTCTATTTTTGCCGGTGGATCAGGCAGGTCCACACTTGCTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS-3UTR CCA 90 bp | TGGAGAGTAATTTGCAGTTGGCTGTCCTGTGACCCACATATACTTAGCAAGTGTGAGAGCACCTCACCCTaGGGCCGGGAACATTCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WRVICSWLSCDPHILSKCESTSP*GREHSL Trigger: CAGCGAATGTTCCCGGCCCCAGGGTGAGGTGCTCTC...ACACTTGCTAAGTATATGTGGGTCACAGGACAGCCAACTGCAAATTACTCTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS-3UTR TCA 90 bp | GTGGGTTTCAGATGTTGTGCCTGCCATCAGAAACACTCAAAGCCCTCTCGTTTGAAAAGATCTGACAGCTaGAGCCCTCCCGGATGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VGFRCCACHQKHSKPSRLKRSDS*SPPGCH Trigger: ATGGCATCCGGGAGGGCTTCAGCTGTCAGATCTTTT...CAAACGAGAGGGCTTTGAGTGTTTCTGATGGCAGGCACAACATCTGAAACCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS-3UTR GCA 90 bp | GCAAGTGTGGACCTGCCTGATCCACCGGCAAAAATAGAAATCCCTCTGGCCATGGGGTTTCAGATGTTGTaGCTGCCATCAGAAACACTC | + |
|
Preference number: 4 (lower is better) Translates to: ASVDLPDPPAKIEIPLAMGFQML*LPSETL Trigger: GAGTGTTTCTGATGGCAGGCACAACATCTGAAACCC...CATGGCCAGAGGGATTTCTATTTTTGCCGGTGGATCAGGCAGGTCCACACTTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| 3UTR CAA 72 bp | AAATCCCTCTGGCCATGCGTTTGTGGGTTTCAGATGTaGTGCCTGCCATCAGAAACACTCAAAGCCCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: KSLWPCVCGFQM*CLPSETLKALS Trigger: CGAGAGGGCTTTGAGTGTTTCTGATGGCAGGCACAACATCTGAAACCCACAAACGCATGGCCAGAGGGATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS-3UTR TCA 90 bp | TTTGTGGGTTTCAGATGTTGTGCCTGCCATCAGAAACACTCAAAGCCCTCTCGTACATTCGCTGTTGTCTaGAGGACTCTGCTCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: FVGFRCCACHQKHSKPSRTFAVV*RTLLLL Trigger: GAGGAGGAGCAGAGTCCTTCAGACAACAGCGAATGT...ACGAGAGGGCTTTGAGTGTTTCTGATGGCAGGCACAACATCTGAAACCCACAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS-3UTR TCA 90 bp | GCAGTTGGCTGTCCTGTGACCCACATATACTTAGCAAGTGTGGACCTGCCTGATCTCTCGTTTGGGTTTTaGAATGGACTCTGGTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: AVGCPVTHIYLASVDLPDLSFGF*NGLWWR Trigger: TCTCCACCAGAGTCCATTTCAAAACCCAAACGAGAG...ATCAGGCAGGTCCACACTTGCTAAGTATATGTGGGTCACAGGACAGCCAACTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS-3UTR GCA 90 bp | GTAATTTGCAGTTGGCTGTCCTGTGACCCACATATACTTAGCAAGTGTGGACCTGAGCCGTTCCACCTCTaGCTCTTGATGAACTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VICSWLSCDPHILSKCGPEPFHL*LLMNWA Trigger: AGCCCAGTTCATCAAGAGGCAGAGGTGGAACGGCTC...AGGTCCACACTTGCTAAGTATATGTGGGTCACAGGACAGCCAACTGCAAATTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS-3UTR GCA 90 bp | TTAGCAAGTGTGGACCTGCCTGATCCACCGGCAAAAATAGAAATCCCTCTGGCCAAATCCCTCTGGCCATaGGTTTGTGGGTTTCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: LASVDLPDPPAKIEIPLAKSLWP*VCGFQM Trigger: CATCTGAAACCCACAAACGCATGGCCAGAGGGATTT...GGCCAGAGGGATTTCTATTTTTGCCGGTGGATCAGGCAGGTCCACACTTGCTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS-3UTR CCA 90 bp | GTTGGCTGTCCTGTGACCCACATATACTTAGCAAGTGTGGACCTGCCTGATCCATCTCTGTATAGTCCCTaGCCAGAACACTTCCACACT | + |
|
Preference number: 4 (lower is better) Translates to: VGCPVTHIYLASVDLPDPSLYSP*PEHFHT Trigger: AGTGTGGAAGTGTTCTGGCCAGGGACTATACAGAGA...TGGATCAGGCAGGTCCACACTTGCTAAGTATATGTGGGTCACAGGACAGCCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| 3UTR CAA 72 bp | TGTGCCTGCCATCAGAAACACTCAAAGCCCTCTCGTTaGGGTTTTGAAATGGACTCTGGTGGAGATGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: CACHQKHSKPSR*GFEMDSGGDAV Trigger: CACAGCATCTCCACCAGAGTCCATTTCAAAACCCAAACGAGAGGGCTTTGAGTGTTTCTGATGGCAGGCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| 3UTR CAA 72 bp | CCACCGGCAAAAATAGAAATCCCTCTGGCCATGCGTTaGTGGGTTTCAGATGTTGTGCCTGCCATCAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: PPAKIEIPLAMR*WVSDVVPAIRN Trigger: GTTTCTGATGGCAGGCACAACATCTGAAACCCACAAACGCATGGCCAGAGGGATTTCTATTTTTGCCGGTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS-3UTR GCA 90 bp | AGATGTTGTGCCTGCCATCAGAAACACTCAAAGCCCTCTCGTTTGGGTTTTGAAAAGGCACACACACTCTaGGGAGCAGCATTGTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RCCACHQKHSKPSRLGFEKAHTL*GAALSS Trigger: TGAGGACAATGCTGCTCCGCAGAGTGTGTGTGCCTT...TTCAAAACCCAAACGAGAGGGCTTTGAGTGTTTCTGATGGCAGGCACAACATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS-3UTR CCA 90 bp | GTAATTTGCAGTTGGCTGTCCTGTGACCCACATATACTTAGCAAGTGTGGACCTTTCCTTCCAGTCTCCTaGCCCTCCTTGCTCTACACT | + |
|
Preference number: 4 (lower is better) Translates to: VICSWLSCDPHILSKCGPFLPVS*PSLLYT Trigger: AGTGTAGAGCAAGGAGGGCCAGGAGACTGGAAGGAA...AGGTCCACACTTGCTAAGTATATGTGGGTCACAGGACAGCCAACTGCAAATTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS-3UTR CCA 90 bp | GCAGTTGGCTGTCCTGTGACCCACATATACTTAGCAAGTGTGGACCTGCCTGATGTTTGGGTTTTGAAATaGACTCTGGTGGAGATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AVGCPVTHIYLASVDLPDVWVLK*TLVEML Trigger: CAGCATCTCCACCAGAGTCCATTTCAAAACCCAAAC...ATCAGGCAGGTCCACACTTGCTAAGTATATGTGGGTCACAGGACAGCCAACTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS-3UTR CCA 90 bp | AGATGTTGTGCCTGCCATCAGAAACACTCAAAGCCCTCTCGTTTGGGTTTTGAAAGCGCATATCGGTGTTaGAAGCCATTTCGAAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RCCACHQKHSKPSRLGFESAYRC*KPFRRR Trigger: CCTCCTTCGAAATGGCTTCCAACACCGATATGCGCT...TTCAAAACCCAAACGAGAGGGCTTTGAGTGTTTCTGATGGCAGGCACAACATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS-3UTR CCA 90 bp | CATCAGAAACACTCAAAGCCCTCTCGTTTGGGTTTTGAAATGGACTCTGGTGGACTGGCCATGCGTTTGTaGGTTTCAGATGTTGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: HQKHSKPSRLGFEMDSGGLAMRL*VSDVVP Trigger: AGGCACAACATCTGAAACCCACAAACGCATGGCCAG...TCCACCAGAGTCCATTTCAAAACCCAAACGAGAGGGCTTTGAGTGTTTCTGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS-3UTR TCA 90 bp | CAGAAACACTCAAAGCCCTCTCGTTTGGGTTTTGAAATGGACTCTGGTGGAGATTTTCATGATTTGAAATaGGTGCCCAGGGTGTCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QKHSKPSRLGFEMDSGGDFHDLK*VPRVSV Trigger: CACCGACACCCTGGGCACTCATTTCAAATCATGAAA...ATCTCCACCAGAGTCCATTTCAAAACCCAAACGAGAGGGCTTTGAGTGTTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS-3UTR GCA 90 bp | CCACCGGCAAAAATAGAAATCCCTCTGGCCATGCGTTTGTGGGTTTCAGATGTTTTCAGATGTTGTGCCTaGCATCAGAAACACTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PPAKIEIPLAMRLWVSDVFRCCA*HQKHSK Trigger: CTTTGAGTGTTTCTGATGGCAGGCACAACATCTGAA...AACATCTGAAACCCACAAACGCATGGCCAGAGGGATTTCTATTTTTGCCGGTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS-3UTR CCA 90 bp | ATCAGAAACACTCAAAGCCCTCTCGTTTGGGTTTTGAAATGGACTCTGGTGGAGAGAGTAATTTGCAGTTaGCTGTCCTGTGACCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: IRNTQSPLVWVLKWTLVERVICS*LSCDPH Trigger: ATGTGGGTCACAGGACAGCCAACTGCAAATTACTCT...CTCCACCAGAGTCCATTTCAAAACCCAAACGAGAGGGCTTTGAGTGTTTCTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS TCA 90 bp | GCAAGACCCTGCAGCAGGCCACGCAGCGCACCCCGTAGTTGGTGGTaGCCAGCCAGTCCGGCGGCTCCCGCAGCTCCTGCAGGCAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: ARPCSRPRSAPRSWW*PASPAAPAAPAGST Trigger: AGTGCTGCCTGCAGGAGCTGCGGGAGCCGCCGGACTGGCTGGTCACCACCAACTACGGGGTGCGCTGCGTGGCCTGCTGCAGGGTCTTGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS TCA 90 bp | GCAGCACGACTGGTACTGGGAGTAGGACTGGTACTCGGAGGACTCTaGGGATGGGGAGCTGCTCCAGTCCCGCATCCCCCGGTCCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: AARLVLGVGLVLGGL*GWGAAPVPHPPVPG Trigger: GCCAGGGACCGGGGGATGCGGGACTGGAGCAGCTCCCCATCCTCAGAGTCCTCCGAGTACCAGTCCTACTCCCAGTACCAGTCGTGCTGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS GCA 90 bp | ACTGGGAGTAGGACTGGTACTCGGAGGACTCTGAGGATGGGGAGCTaGTCCAGTCCCGCATCCCCCGGTCCCTGGCAGCGAAGTAGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: TGSRTGTRRTLRMGS*SSPASPGPWQRSRG Trigger: GCCTCTACTTCGCTGCCAGGGACCGGGGGATGCGGGACTGGAGCAGCTCCCCATCCTCAGAGTCCTCCGAGTACCAGTCCTACTCCCAGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS CCA 90 bp | GAGTGCCCAGGGTGTCGGTGCTCCAGCTGTTCAGTGAGAGTTGGCTaGGGCTGTACTGAAGGCCTCCAGCTGGCCCCAGCCAGAGTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: ECPGCRCSSCSVRVG*GCTEGLQLAPARVD Trigger: GTCCACTCTGGCTGGGGCCAGCTGGAGGCCTTCAGTACAGCCCCAGCCAACTCTCACTGAACAGCTGGAGCACCGACACCCTGGGCACTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS CCA 90 bp | AGCGAAGTAGAGGCCCTCCTCCCGGGGAATGGCAGGCCCCGGCCGTaGGGACGACCCTTCTCTCTGTATAGTCCCTGGCCAGAACACTTC | + |
|
Preference number: 5 (lower is better) Translates to: SEVEALLPGNGRPRP*GRPFSLYSPWPEHF Trigger: GAAGTGTTCTGGCCAGGGACTATACAGAGAGAAGGGTCGTCCCCACGGCCGGGGCCTGCCATTCCCCGGGAGGAGGGCCTCTACTTCGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS GCA 90 bp | AGGGCAGGGTTGGGTATCTCCCCTCTGGCTCACTGCTTCTCCTGCTaGTGTGCTGAGAGCACCTCACCCTGGGGCCGGGAACATTCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RAGLGISPLAHCFSC*CAESTSPWGREHSL Trigger: CAGCGAATGTTCCCGGCCCCAGGGTGAGGTGCTCTCAGCACAGCAGCAGGAGAAGCAGTGAGCCAGAGGGGAGATACCCAACCCTGCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS GCA 90 bp | GTGAGGGCAGGGTTGGGTATCTCCCCTCTGGCTCACTGCTTCTCCTaGTGCTGTGCTGAGAGCACCTCACCCTGGGGCCGGGAACATTCG | + |
|
Preference number: 5 (lower is better) Translates to: VRAGLGISPLAHCFS*CCAESTSPWGREHS Trigger: CGAATGTTCCCGGCCCCAGGGTGAGGTGCTCTCAGCACAGCAGCAGGAGAAGCAGTGAGCCAGAGGGGAGATACCCAACCCTGCCCTCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS CCA 90 bp | AAGGAGGAGCCGTTCCACCTCTGCCTCTTGATGAACTGGGCTTCATaGATGCGGGGCTTCCTGGTGACCGGCTCGAAGCCGGCCTCCGTC | + |
|
Preference number: 5 (lower is better) Translates to: KEEPFHLCLLMNWAS*MRGFLVTGSKPASV Trigger: GACGGAGGCCGGCTTCGAGCCGGTCACCAGGAAGCCCCGCATCCATGAAGCCCAGTTCATCAAGAGGCAGAGGTGGAACGGCTCCTCCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS GCA 90 bp | GGCAGCACTCCAGCAGGTCTATGTCCTCGGGCTCGGGGCTGCAGTTaGTCTTGCAGGCTTCCAGGTCCCAGCGCATATCGGTGTTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GSTPAGLCPRARGCS*SCRLPGPSAYRCWK Trigger: CTTCCAACACCGATATGCGCTGGGACCTGGAAGCCTGCAAGAGCAACTGCAGCCCCGAGCCCGAGGACATAGACCTGCTGGAGTGCTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS CCA 90 bp | GCCATTTCGAAGGAGGAGCCGTTCCACCTCTGCCTCTTGATGAACTaGGCTTCATGGATGCGGGGCTTCCTGGTGACCGGCTCGAAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: AISKEEPFHLCLLMN*ASWMRGFLVTGSKP Trigger: CGGCTTCGAGCCGGTCACCAGGAAGCCCCGCATCCATGAAGCCCAGTTCATCAAGAGGCAGAGGTGGAACGGCTCCTCCTTCGAAATGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS CCA 90 bp | CTGGCTCACTGCTTCTCCTGCTGCTGTGCTGAGAGCACCTCACCCTaGGGCCGGGAACATTCGCTGTTGTCTGAAGGACTCTGCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LAHCFSCCCAESTSP*GREHSLLSEGLCSS Trigger: GGAGGAGCAGAGTCCTTCAGACAACAGCGAATGTTCCCGGCCCCAGGGTGAGGTGCTCTCAGCACAGCAGCAGGAGAAGCAGTGAGCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS GCA 90 bp | ACTCCAGCAGGTCTATGTCCTCGGGCTCGGGGCTGCAGTTGCTCTTaGAGGCTTCCAGGTCCCAGCGCATATCGGTGTTGGAAGCCATTT | + |
|
Preference number: 5 (lower is better) Translates to: TPAGLCPRARGCSCS*RLPGPSAYRCWKPF Trigger: AAATGGCTTCCAACACCGATATGCGCTGGGACCTGGAAGCCTGCAAGAGCAACTGCAGCCCCGAGCCCGAGGACATAGACCTGCTGGAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS-3UTR CAA 90 bp | GTGCCTAGGGCAGGAAGGGGGTTCCTTCCAGTCTCCTGGCCCTCCTTGCTCTACCAGCGCATATCGGTGTaGGAAGCCATTTCGAAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: VPRAGRGFLPVSWPSLLYQRISV*EAISKE Trigger: CTCCTTCGAAATGGCTTCCAACACCGATATGCGCTG...GTAGAGCAAGGAGGGCCAGGAGACTGGAAGGAACCCCCTTCCTGCCCTAGGCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS TCA 90 bp | AGAACACTTCCACACTCTCCTCAGTGGACTCAGGGCTGGTCAAGCTaGGGGTGGTCCCATCGGTGGGTGACTGTTCTCCCCTGTGATCTG | + |
|
Preference number: 5 (lower is better) Translates to: RTLPHSPQWTQGWSS*GWSHRWVTVLPCDL Trigger: CAGATCACAGGGGAGAACAGTCACCCACCGATGGGACCACCCTCAGCTTGACCAGCCCTGAGTCCACTGAGGAGAGTGTGGAAGTGTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS GCA 90 bp | AGAAGGCACACACACTCTGCGGAGCAGCATTGTCCTCATCGCACATaGAGGAGCAGCACGACTGGTACTGGGAGTAGGACTGGTACTCGG | + |
|
Preference number: 5 (lower is better) Translates to: RRHTHSAEQHCPHRT*RSSTTGTGSRTGTR Trigger: CCGAGTACCAGTCCTACTCCCAGTACCAGTCGTGCTGCTCCTGCATGTGCGATGAGGACAATGCTGCTCCGCAGAGTGTGTGTGCCTTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS-3UTR CAA 90 bp | GCAAGTGTGGACCTGCCTGATCCACCGGCAAAAATAGAAATCCCTCTGGCCATGGAGGTGAGGGCAGGGTaGGGTATCTCCCCTCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: ASVDLPDPPAKIEIPLAMEVRAG*GISPLA Trigger: AGCCAGAGGGGAGATACCCAACCCTGCCCTCACCTC...CATGGCCAGAGGGATTTCTATTTTTGCCGGTGGATCAGGCAGGTCCACACTTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS-3UTR CAA 90 bp | GACCTGCCTGATCCACCGGCAAAAATAGAAATCCCTCTGGCCATGCGTTTGTGGCTGTTGGTCATGTGCTaGGCCCTGAGCCCGCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: DLPDPPAKIEIPLAMRLWLLVMC*ALSPPS Trigger: AGAAGGCGGGCTCAGGGCCAAGCACATGACCAACAG...CCACAAACGCATGGCCAGAGGGATTTCTATTTTTGCCGGTGGATCAGGCAGGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS GCA 90 bp | ATATCGGTGTTGGAAGCCATTTCGAAGGAGGAGCCGTTCCACCTCTaGCTCTTGATGAACTGGGCTTCATGGATGCGGGGCTTCCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: ISVLEAISKEEPFHL*LLMNWASWMRGFLV Trigger: CACCAGGAAGCCCCGCATCCATGAAGCCCAGTTCATCAAGAGGCAGAGGTGGAACGGCTCCTCCTTCGAAATGGCTTCCAACACCGATAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS TCA 90 bp | AGTGGACTCAGGGCTGGTCAAGCTGAGGGTGGTCCCATCGGTGGGTaGCTGTTCTCCCCTGTGATCTGTGAAGTAGCATTTCATGATTTG | + |
|
Preference number: 5 (lower is better) Translates to: SGLRAGQAEGGPIGG*LFSPVICEVAFHDL Trigger: CAAATCATGAAATGCTACTTCACAGATCACAGGGGAGAACAGTCACCCACCGATGGGACCACCCTCAGCTTGACCAGCCCTGAGTCCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS-3UTR CAA 90 bp | TTTGCAGTTGGCTGTCCTGTGACCCACATATACTTAGCAAGTGTGGACCTGCCTCTCTGCGGAGCAGCATaGTCCTCATCGCACATGCAG | + |
|
Preference number: 5 (lower is better) Translates to: FAVGCPVTHIYLASVDLPLCGAA*SSSHMQ Trigger: CTGCATGTGCGATGAGGACAATGCTGCTCCGCAGAG...AGGCAGGTCCACACTTGCTAAGTATATGTGGGTCACAGGACAGCCAACTGCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS-3UTR CAA 90 bp | ATCAGAAACACTCAAAGCCCTCTCGTTTGGGTTTTGAAATGGACTCTGGTGGAGGGGCTGCAGTTGCTCTaGCAGGCTTCCAGGTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: IRNTQSPLVWVLKWTLVEGLQLL*QASRSQ Trigger: CTGGGACCTGGAAGCCTGCAAGAGCAACTGCAGCCC...CTCCACCAGAGTCCATTTCAAAACCCAAACGAGAGGGCTTTGAGTGTTTCTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS-3UTR CAA 90 bp | TTAGCAAGTGTGGACCTGCCTGATCCACCGGCAAAAATAGAAATCCCTCTGGCCCGGGAACATTCGCTGTaGTCTGAAGGACTCTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LASVDLPDPPAKIEIPLAREHSL*SEGLCS Trigger: GGAGCAGAGTCCTTCAGACAACAGCGAATGTTCCCG...GGCCAGAGGGATTTCTATTTTTGCCGGTGGATCAGGCAGGTCCACACTTGCTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS TCA 90 bp | CTGTTCTCCCCTGTGATCTGTGAAGTAGCATTTCATGATTTGAAATaGGTGCCCAGGGTGTCGGTGCTCCAGCTGTTCAGTGAGAGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LFSPVICEVAFHDLK*VPRVSVLQLFSESW Trigger: CCAACTCTCACTGAACAGCTGGAGCACCGACACCCTGGGCACTCATTTCAAATCATGAAATGCTACTTCACAGATCACAGGGGAGAACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS-3UTR CAA 90 bp | AATAGAAATCCCTCTGGCCATGCGTTTGTGGGTTTCAGATGTTGTGCCTGCCATCCTCTGGCCATGCGTTaGTGGGTTTCAGATGTTGTG | + |
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Preference number: 5 (lower is better) Translates to: NRNPSGHAFVGFRCCACHPLAMR*WVSDVV Trigger: CACAACATCTGAAACCCACAAACGCATGGCCAGAGG...ATGGCAGGCACAACATCTGAAACCCACAAACGCATGGCCAGAGGGATTTCTATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS-3UTR CAA 90 bp | ATCAGAAACACTCAAAGCCCTCTCGTTTGGGTTTTGAAATGGACTCTGGTGGAGCCTCTCGTTTGGGTTTaGAAATGGACTCTGGTGGAG | + |
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Preference number: 5 (lower is better) Translates to: IRNTQSPLVWVLKWTLVEPLVWV*KWTLVE Trigger: CTCCACCAGAGTCCATTTCAAAACCCAAACGAGAGG...CTCCACCAGAGTCCATTTCAAAACCCAAACGAGAGGGCTTTGAGTGTTTCTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS-3UTR CAA 90 bp | AATAGAAATCCCTCTGGCCATGCGTTTGTGGGTTTCAGATGTTGTGCCTGCCATTCAAAGCCCTCTCGTTaGGGTTTTGAAATGGACTCT | + |
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Preference number: 5 (lower is better) Translates to: NRNPSGHAFVGFRCCACHSKPSR*GFEMDS Trigger: AGAGTCCATTTCAAAACCCAAACGAGAGGGCTTTGA...ATGGCAGGCACAACATCTGAAACCCACAAACGCATGGCCAGAGGGATTTCTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS-3UTR CAA 90 bp | CAGAAACACTCAAAGCCCTCTCGTTTGGGTTTTGAAATGGACTCTGGTGGAGATTGTGGGTTTCAGATGTaGTGCCTGCCATCAGAAACA | + |
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Preference number: 5 (lower is better) Translates to: QKHSKPSRLGFEMDSGGDCGFQM*CLPSET Trigger: TGTTTCTGATGGCAGGCACAACATCTGAAACCCACA...ATCTCCACCAGAGTCCATTTCAAAACCCAAACGAGAGGGCTTTGAGTGTTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS GCA 72 bp | GGGTTGGGTATCTCCCCTCTGGCTCACTGCTTCTCCTaGTGCTGTGCTGAGAGCACCTCACCCTGGGGCCGG | + |
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Preference number: 6 (lower is better) Translates to: GLGISPLAHCFS*CCAESTSPWGR Trigger: CCGGCCCCAGGGTGAGGTGCTCTCAGCACAGCAGCAGGAGAAGCAGTGAGCCAGAGGGGAGATACCCAACCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS CCA 72 bp | GGGTGTCGGTGCTCCAGCTGTTCAGTGAGAGTTGGCTaGGGCTGTACTGAAGGCCTCCAGCTGGCCCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: GCRCSSCSVRVG*GCTEGLQLAPA Trigger: GGCTGGGGCCAGCTGGAGGCCTTCAGTACAGCCCCAGCCAACTCTCACTGAACAGCTGGAGCACCGACACCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS TCA 72 bp | CTGGTACTGGGAGTAGGACTGGTACTCGGAGGACTCTaGGGATGGGGAGCTGCTCCAGTCCCGCATCCCCCG | + |
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Preference number: 6 (lower is better) Translates to: LVLGVGLVLGGL*GWGAAPVPHPP Trigger: CGGGGGATGCGGGACTGGAGCAGCTCCCCATCCTCAGAGTCCTCCGAGTACCAGTCCTACTCCCAGTACCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS TCA 72 bp | CCACACTCTCCTCAGTGGACTCAGGGCTGGTCAAGCTaGGGGTGGTCCCATCGGTGGGTGACTGTTCTCCCC | + |
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Preference number: 6 (lower is better) Translates to: PHSPQWTQGWSS*GWSHRWVTVLP Trigger: GGGGAGAACAGTCACCCACCGATGGGACCACCCTCAGCTTGACCAGCCCTGAGTCCACTGAGGAGAGTGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS GCA 72 bp | GGTCTATGTCCTCGGGCTCGGGGCTGCAGTTGCTCTTaGAGGCTTCCAGGTCCCAGCGCATATCGGTGTTGG | + |
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Preference number: 6 (lower is better) Translates to: GLCPRARGCSCS*RLPGPSAYRCW Trigger: CCAACACCGATATGCGCTGGGACCTGGAAGCCTGCAAGAGCAACTGCAGCCCCGAGCCCGAGGACATAGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS GCA 72 bp | TTGGGTATCTCCCCTCTGGCTCACTGCTTCTCCTGCTaGTGTGCTGAGAGCACCTCACCCTGGGGCCGGGAA | + |
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Preference number: 6 (lower is better) Translates to: LGISPLAHCFSC*CAESTSPWGRE Trigger: TTCCCGGCCCCAGGGTGAGGTGCTCTCAGCACAGCAGCAGGAGAAGCAGTGAGCCAGAGGGGAGATACCCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS GCA 72 bp | GTGAGGGCAGGGTTGGGTATCTCCCCTCTGGCTCACTaGTTCTCCTGCTGCTGTGCTGAGAGCACCTCACCC | + |
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Preference number: 6 (lower is better) Translates to: VRAGLGISPLAH*FSCCCAESTSP Trigger: GGGTGAGGTGCTCTCAGCACAGCAGCAGGAGAAGCAGTGAGCCAGAGGGGAGATACCCAACCCTGCCCTCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS CCA 72 bp | AAGGAGGAGCCGTTCCACCTCTGCCTCTTGATGAACTaGGCTTCATGGATGCGGGGCTTCCTGGTGACCGGC | + |
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Preference number: 6 (lower is better) Translates to: KEEPFHLCLLMN*ASWMRGFLVTG Trigger: GCCGGTCACCAGGAAGCCCCGCATCCATGAAGCCCAGTTCATCAAGAGGCAGAGGTGGAACGGCTCCTCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS TCA 72 bp | CACCTCACCCTGGGGCCGGGAACATTCGCTGTTGTCTaGAGGACTCTGCTCCTCCTCCAGCTGTTGGTCATG | + |
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Preference number: 6 (lower is better) Translates to: HLTLGPGTFAVV*RTLLLLQLLVM Trigger: CATGACCAACAGCTGGAGGAGGAGCAGAGTCCTTCAGACAACAGCGAATGTTCCCGGCCCCAGGGTGAGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS CCA 72 bp | TGCTTCTCCTGCTGCTGTGCTGAGAGCACCTCACCCTaGGGCCGGGAACATTCGCTGTTGTCTGAAGGACTC | + |
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Preference number: 6 (lower is better) Translates to: CFSCCCAESTSP*GREHSLLSEGL Trigger: GAGTCCTTCAGACAACAGCGAATGTTCCCGGCCCCAGGGTGAGGTGCTCTCAGCACAGCAGCAGGAGAAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS CAA 90 bp | TGCTGTGCTGAGAGCACCTCACCCTGGGGCCGGGAACATTCGCTGTaGTCTGAAGGACTCTGCTCCTCCTCCAGCTGTTGGTCATGTGCT | + |
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Preference number: 6 (lower is better) Translates to: CCAESTSPWGREHSL*SEGLCSSSSCWSCA Trigger: AGCACATGACCAACAGCTGGAGGAGGAGCAGAGTCCTTCAGACAACAGCGAATGTTCCCGGCCCCAGGGTGAGGTGCTCTCAGCACAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS CAA 90 bp | CTGCAGTTGCTCTTGCAGGCTTCCAGGTCCCAGCGCATATCGGTGTaGGAAGCCATTTCGAAGGAGGAGCCGTTCCACCTCTGCCTCTTG | + |
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Preference number: 6 (lower is better) Translates to: LQLLLQASRSQRISV*EAISKEEPFHLCLL Trigger: CAAGAGGCAGAGGTGGAACGGCTCCTCCTTCGAAATGGCTTCCAACACCGATATGCGCTGGGACCTGGAAGCCTGCAAGAGCAACTGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS CAA 72 bp | CTCTTGCAGGCTTCCAGGTCCCAGCGCATATCGGTGTaGGAAGCCATTTCGAAGGAGGAGCCGTTCCACCTC | + |
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Preference number: 6 (lower is better) Translates to: LLQASRSQRISV*EAISKEEPFHL Trigger: GAGGTGGAACGGCTCCTCCTTCGAAATGGCTTCCAACACCGATATGCGCTGGGACCTGGAAGCCTGCAAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS GCA 72 bp | ACACACTCTGCGGAGCAGCATTGTCCTCATCGCACATaGAGGAGCAGCACGACTGGTACTGGGAGTAGGACT | + |
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Preference number: 6 (lower is better) Translates to: THSAEQHCPHRT*RSSTTGTGSRT Trigger: AGTCCTACTCCCAGTACCAGTCGTGCTGCTCCTGCATGTGCGATGAGGACAATGCTGCTCCGCAGAGTGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS GCA 72 bp | TTGGAAGCCATTTCGAAGGAGGAGCCGTTCCACCTCTaGCTCTTGATGAACTGGGCTTCATGGATGCGGGGC | + |
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Preference number: 6 (lower is better) Translates to: LEAISKEEPFHL*LLMNWASWMRG Trigger: GCCCCGCATCCATGAAGCCCAGTTCATCAAGAGGCAGAGGTGGAACGGCTCCTCCTTCGAAATGGCTTCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS CCA 72 bp | TCTTGCAGGCTTCCAGGTCCCAGCGCATATCGGTGTTaGAAGCCATTTCGAAGGAGGAGCCGTTCCACCTCT | + |
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Preference number: 6 (lower is better) Translates to: SCRLPGPSAYRC*KPFRRRSRSTS Trigger: AGAGGTGGAACGGCTCCTCCTTCGAAATGGCTTCCAACACCGATATGCGCTGGGACCTGGAAGCCTGCAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS TCA 72 bp | AGGGCTGGTCAAGCTGAGGGTGGTCCCATCGGTGGGTaGCTGTTCTCCCCTGTGATCTGTGAAGTAGCATTT | + |
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Preference number: 6 (lower is better) Translates to: RAGQAEGGPIGG*LFSPVICEVAF Trigger: AAATGCTACTTCACAGATCACAGGGGAGAACAGTCACCCACCGATGGGACCACCCTCAGCTTGACCAGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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| CDS TCA 72 bp | CCTGTGATCTGTGAAGTAGCATTTCATGATTTGAAATaGGTGCCCAGGGTGTCGGTGCTCCAGCTGTTCAGT | + |
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Preference number: 6 (lower is better) Translates to: PVICEVAFHDLK*VPRVSVLQLFS Trigger: ACTGAACAGCTGGAGCACCGACACCCTGGGCACTCATTTCAAATCATGAAATGCTACTTCACAGATCACAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311787.6 |
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