RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM169A (Homo sapiens)

Ensembl gene IDs: ENSG00000198780

Ensembl transcript IDs: ENST00000389156.9, ENST00000506954.1, ENST00000510496.5, ENST00000510609.5, ENST00000514200.5, ENST00000514215.5

Found 427 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGTTTCCTGGGGCTCAGATACCCCCTCCTCACCCTGGTCTTCCAATaGGGAAGTAGTATTAGGAGACAAATTCTCAGAGACCGGTTCTTC +
Preference number: 1 (lower is better)
Translates to: CFLGLRYPLLTLVFQ*GSSIRRQILRDRFF
Trigger: GAAGAACCGGTCTCTGAGAATTTGTCTCCTAATACTACTTCCTCATTGGAAGACCAGGGTGAGGAGGGGGTATCTGAGCCCCAGGAAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR CCA 90 bp TCTAATTCAGATTCCTTTTCACCATCTTGCTTCTCTTGCTGTGGCTaGGTTTCCAGTGCTGGCCGTGCATCTCTATCACTGCTTTCATCC +
Preference number: 1 (lower is better)
Translates to: SNSDSFSPSCFSCCG*VSSAGRASLSLLSS
Trigger: GGATGAAAGCAGTGATAGAGATGCACGGCCAGCACTGGAAACCCAGCCACAGCAAGAGAAGCAAGATGGTGAAAAGGAATCTGAATTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR GCA 90 bp TTCTTCCTTCAGGTCAGCTTAGCTTTCTTCTTAGCAGGTCCTTTATaGCCTTTGGCCTTTCTTCTTAAATTCCGCCTGTCTACCACAGGC +
Preference number: 1 (lower is better)
Translates to: FFLQVSLAFFLAGPL*PLAFLLKFRLSTTG
Trigger: GCCTGTGGTAGACAGGCGGAATTTAAGAAGAAAGGCCAAAGGGCATAAAGGACCTGCTAAGAAGAAAGCTAAGCTGACCTGAAGGAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR CCA 90 bp CGCTGGTACCAGTGTCCAACACCTTCAACTTCCCAAAGGAGTTCATaGTCTCCTGGATACTTCTCAAAGTATTGCTTGCAAGCTGTATAC +
Preference number: 1 (lower is better)
Translates to: RWYQCPTPSTSQRSS*SPGYFSKYCLQAVY
Trigger: GTATACAGCTTGCAAGCAATACTTTGAGAAGTATCCAGGAGACCATGAACTCCTTTGGGAAGTTGAAGGTGTTGGACACTGGTACCAGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR CCA 90 bp CCAGTGTCCAACACCTTCAACTTCCCAAAGGAGTTCATGGTCTCCTaGATACTTCTCAAAGTATTGCTTGCAAGCTGTATACATGAGAGA +
Preference number: 1 (lower is better)
Translates to: PVSNTFNFPKEFMVS*ILLKVLLASCIHER
Trigger: TCTCTCATGTATACAGCTTGCAAGCAATACTTTGAGAAGTATCCAGGAGACCATGAACTCCTTTGGGAAGTTGAAGGTGTTGGACACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR CCA 90 bp ATTTTAAGTGCTTCTCTTTGTAATGCTCTGGTGACTGGTATTCGCTaGTACCAGTGTCCAACACCTTCAACTTCCCAAAGGAGTTCATGG +
Preference number: 1 (lower is better)
Translates to: ILSASLCNALVTGIR*YQCPTPSTSQRSSW
Trigger: CCATGAACTCCTTTGGGAAGTTGAAGGTGTTGGACACTGGTACCAGCGAATACCAGTCACCAGAGCATTACAAAGAGAAGCACTTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR CCA 90 bp CTGCATCTCACTAGACTGATTGTCTTCAGTTCTTGCTTCGTATTCTaGAACAGATGCAGGACCATATTCTCCAGACATAGGTCTTTTAGG +
Preference number: 1 (lower is better)
Translates to: LHLTRLIVFSSCFVF*NRCRTIFSRHRSFR
Trigger: CCTAAAAGACCTATGTCTGGAGAATATGGTCCTGCATCTGTTCCAGAATACGAAGCAAGAACTGAAGACAATCAGTCTAGTGAGATGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR CCA 90 bp GCTTTCCAATCTTTGGCCGCTTTAGATTACCACTTCGAGTATGAGTaGAAACAGATGTTTTATCATGACCTTCGGAAGTGCTTGCAAAGG +
Preference number: 1 (lower is better)
Translates to: AFQSLAALDYHFEYE*KQMFYHDLRKCLQR
Trigger: CCTTTGCAAGCACTTCCGAAGGTCATGATAAAACATCTGTTTCCACTCATACTCGAAGTGGTAATCTAAAGCGGCCAAAGATTGGAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR GCA 90 bp AGATGTGCTTTCTTTCTTGGAAGTAGGGACAATTTCTCTTCCATGTaGCCCTTTTCATCAGATGTGCCTTCATCCATCAACATTTCTGAG +
Preference number: 1 (lower is better)
Translates to: RCAFFLGSRDNFSSM*PFSSDVPSSINISE
Trigger: CTCAGAAATGTTGATGGATGAAGGCACATCTGATGAAAAGGGGCACATGGAAGAGAAATTGTCCCTACTTCCAAGAAAGAAAGCACATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR TCA 90 bp GCAGAACATAAGAGCAGATATTTAGATATTAGTACAGGCTCAATTTaGTGCAATCATAAACCTTCAAGATTTCTAGTCACTGAAACCCCA +
Preference number: 1 (lower is better)
Translates to: AEHKSRYLDISTGSI*CNHKPSRFLVTETP
Trigger: TGGGGTTTCAGTGACTAGAAATCTTGAAGGTTTATGATTGCATCAAATTGAGCCTGTACTAATATCTAAATATCTGCTCTTATGTTCTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR CCA 90 bp CCTTTGGCCTTTCTTCTTAAATTCCGCCTGTCTACCACAGGCACTTCCACTTCTGCAGTAGATGTTTCCTaGGGCTCAGATACCCCCTCC +
Preference number: 2 (lower is better)
Translates to: PLAFLLKFRLSTTGTSTSAVDVS*GSDTPS
Trigger: GGAGGGGGTATCTGAGCCCCAGGAAACATCTACTGC...AGAAGTGGAAGTGCCTGTGGTAGACAGGCGGAATTTAAGAAGAAAGGCCAAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR TCA 90 bp TCACCATCTTGCTTCTCTTGCTGTGGCTGGGTTTCCAGTGCTGGCCGTGCATCTTGCATCTCACTAGACTaGTTGTCTTCAGTTCTTGCT +
Preference number: 2 (lower is better)
Translates to: SPSCFSCCGWVSSAGRASCISLD*LSSVLA
Trigger: AGCAAGAACTGAAGACAATCAGTCTAGTGAGATGCA...AGATGCACGGCCAGCACTGGAAACCCAGCCACAGCAAGAGAAGCAAGATGGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR CCA 90 bp CCTTTGGCCTTTCTTCTTAAATTCCGCCTGTCTACCACAGGCACTTCCACTTCTCATGAGAGAAGACAGTaGATACCGCAAGCCAAGCGC +
Preference number: 2 (lower is better)
Translates to: PLAFLLKFRLSTTGTSTSHERRQ*IPQAKR
Trigger: GCGCTTGGCTTGCGGTATCCACTGTCTTCTCTCATG...AGAAGTGGAAGTGCCTGTGGTAGACAGGCGGAATTTAAGAAGAAAGGCCAAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR TCA 90 bp CCTTTGGCCTTTCTTCTTAAATTCCGCCTGTCTACCACAGGCACTTCCACTTCTGACTGCTCCTCTGACTaGTTCTTCTGTCCTGCATTC +
Preference number: 2 (lower is better)
Translates to: PLAFLLKFRLSTTGTSTSDCSSD*FFCPAF
Trigger: GAATGCAGGACAGAAGAATCAGTCAGAGGAGCAGTC...AGAAGTGGAAGTGCCTGTGGTAGACAGGCGGAATTTAAGAAGAAAGGCCAAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR TCA 90 bp CCTTTGGCCTTTCTTCTTAAATTCCGCCTGTCTACCACAGGCACTTCCACTTCTGCCGATTGTGTAAACTaGTCCAGTTGCTCGGAAGAT +
Preference number: 2 (lower is better)
Translates to: PLAFLLKFRLSTTGTSTSADCVN*SSCSED
Trigger: ATCTTCCGAGCAACTGGATCAGTTTACACAATCGGC...AGAAGTGGAAGTGCCTGTGGTAGACAGGCGGAATTTAAGAAGAAAGGCCAAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR GCA 90 bp CCTTTGGCCTTTCTTCTTAAATTCCGCCTGTCTACCACAGGCACTTCCACTTCTTCCTTTTCACCATCTTaGTTCTCTTGCTGTGGCTGG +
Preference number: 2 (lower is better)
Translates to: PLAFLLKFRLSTTGTSTSSFSPS*FSCCGW
Trigger: CCAGCCACAGCAAGAGAAGCAAGATGGTGAAAAGGA...AGAAGTGGAAGTGCCTGTGGTAGACAGGCGGAATTTAAGAAGAAAGGCCAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR TCA 90 bp CCTTTGGCCTTTCTTCTTAAATTCCGCCTGTCTACCACAGGCACTTCCACTTCTAAGTCCTCCAGCATGTaGAGCCCAAAATCTTTACCT +
Preference number: 2 (lower is better)
Translates to: PLAFLLKFRLSTTGTSTSKSSSM*SPKSLP
Trigger: AGGTAAAGATTTTGGGCTTCACATGCTGGAGGACTT...AGAAGTGGAAGTGCCTGTGGTAGACAGGCGGAATTTAAGAAGAAAGGCCAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR GCA 90 bp AGTATTAGGAGACAAATTCTCAGAGACCGGTTCTTCGGAAAATTCAGCTATCACTGGCTGGGTTTCCAGTaGTGGCCGTGCATCTCTATC +
Preference number: 2 (lower is better)
Translates to: SIRRQILRDRFFGKFSYHWLGFQ*WPCISI
Trigger: GATAGAGATGCACGGCCAGCACTGGAAACCCAGCCA...GTGATAGCTGAATTTTCCGAAGAACCGGTCTCTGAGAATTTGTCTCCTAATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR GCA 90 bp GTCTTCAAGTTCAACCTCTATCAAAGAACTCTGAGGAAGAGCAGTAGATGTTTCTGGCTGGGTTTCCAGTaGTGGCCGTGCATCTCTATC +
Preference number: 2 (lower is better)
Translates to: VFKFNLYQRTLRKSSRCFWLGFQ*WPCISI
Trigger: GATAGAGATGCACGGCCAGCACTGGAAACCCAGCCA...GAAACATCTACTGCTCTTCCTCAGAGTTCTTTGATAGAGGTTGAACTTGAAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR CCA 90 bp CCTTTGGCCTTTCTTCTTAAATTCCGCCTGTCTACCACAGGCACTTCCACTTCTTCCCAAAGGAGTTCATaGTCTCCTGGATACTTCTCA +
Preference number: 2 (lower is better)
Translates to: PLAFLLKFRLSTTGTSTSSQRSS*SPGYFS
Trigger: TGAGAAGTATCCAGGAGACCATGAACTCCTTTGGGA...AGAAGTGGAAGTGCCTGTGGTAGACAGGCGGAATTTAAGAAGAAAGGCCAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR CCA 90 bp GTCTTCAAGTTCAACCTCTATCAAAGAACTCTGAGGAAGAGCAGTAGATGTTTCTTCTCTTGCTGTGGCTaGGTTTCCAGTGCTGGCCGT +
Preference number: 2 (lower is better)
Translates to: VFKFNLYQRTLRKSSRCFFSCCG*VSSAGR
Trigger: ACGGCCAGCACTGGAAACCCAGCCACAGCAAGAGAA...GAAACATCTACTGCTCTTCCTCAGAGTTCTTTGATAGAGGTTGAACTTGAAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR TCA 90 bp CCTTTGGCCTTTCTTCTTAAATTCCGCCTGTCTACCACAGGCACTTCCACTTCTACAGATGTTTTATCATaGCCTTCGGAAGTGCTTGCA +
Preference number: 2 (lower is better)
Translates to: PLAFLLKFRLSTTGTSTSTDVLS*PSEVLA
Trigger: TGCAAGCACTTCCGAAGGTCATGATAAAACATCTGT...AGAAGTGGAAGTGCCTGTGGTAGACAGGCGGAATTTAAGAAGAAAGGCCAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR CCA 90 bp CCTTTGGCCTTTCTTCTTAAATTCCGCCTGTCTACCACAGGCACTTCCACTTCTGTAGAATTAGGGAGGTaGCAAGATTTAAGGAGATGC +
Preference number: 2 (lower is better)
Translates to: PLAFLLKFRLSTTGTSTSVELGR*QDLRRC
Trigger: GCATCTCCTTAAATCTTGCCACCTCCCTAATTCTAC...AGAAGTGGAAGTGCCTGTGGTAGACAGGCGGAATTTAAGAAGAAAGGCCAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR CCA 90 bp GGAAAACCACCATCAGATCGTTCTTCATTTGACATAGTAGCAACATTGTCTGAAACGTGGGGTCTTATCTaGTGCATCTACCTCAGGGGG +
Preference number: 2 (lower is better)
Translates to: GKPPSDRSSFDIVATLSETWGLI*CIYLRG
Trigger: CCCCCTGAGGTAGATGCACCAGATAAGACCCCACGT...TTCAGACAATGTTGCTACTATGTCAAATGAAGAACGATCTGATGGTGGTTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR TCA 90 bp AGGAGACAAATTCTCAGAGACCGGTTCTTCGGAAAATTCAGCTATCACAGAGTTGGCAGGAAGATCTGTTaGTTGGAGAATCACTCCATG +
Preference number: 2 (lower is better)
Translates to: RRQILRDRFFGKFSYHRVGRKIC*LENHSM
Trigger: CATGGAGTGATTCTCCAATCAACAGATCTTCCTGCC...AACTCTGTGATAGCTGAATTTTCCGAAGAACCGGTCTCTGAGAATTTGTCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR TCA 90 bp CCTTTGGCCTTTCTTCTTAAATTCCGCCTGTCTACCACAGGCACTTCCACTTCTCTCTTCTGTTATAAGTaGGGTCTTAAGAGAATCGTC +
Preference number: 2 (lower is better)
Translates to: PLAFLLKFRLSTTGTSTSLFCYK*GLKRIV
Trigger: GACGATTCTCTTAAGACCTCACTTATAACAGAAGAG...AGAAGTGGAAGTGCCTGTGGTAGACAGGCGGAATTTAAGAAGAAAGGCCAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR TCA 90 bp TGTCTGAACTCCCAAGATGTGCTTTCTTTCTTGGAAGTAGGGACAATTTCTCTTTACCTCAGGGGGTTTTaGAGATTCTACCACCAGTGG +
Preference number: 2 (lower is better)
Translates to: CLNSQDVLSFLEVGTISLYLRGF*RFYHQW
Trigger: CCACTGGTGGTAGAATCTTCAAAACCCCCTGAGGTA...AAGAGAAATTGTCCCTACTTCCAAGAAAGAAAGCACATCTTGGGAGTTCAGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR CCA 90 bp TGTCTGAACTCCCAAGATGTGCTTTCTTTCTTGGAAGTAGGGACAATTTCTCTTGTGACTGGTATTCGCTaGTACCAGTGTCCAACACCT +
Preference number: 2 (lower is better)
Translates to: CLNSQDVLSFLEVGTISLVTGIR*YQCPTP
Trigger: AGGTGTTGGACACTGGTACCAGCGAATACCAGTCAC...AAGAGAAATTGTCCCTACTTCCAAGAAAGAAAGCACATCTTGGGAGTTCAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR CCA 90 bp GGAAAACCACCATCAGATCGTTCTTCATTTGACATAGTAGCAACATTGTCTGAACTGGGTTTCCAGTGCTaGCCGTGCATCTCTATCACT +
Preference number: 2 (lower is better)
Translates to: GKPPSDRSSFDIVATLSELGFQC*PCISIT
Trigger: AGTGATAGAGATGCACGGCCAGCACTGGAAACCCAG...TTCAGACAATGTTGCTACTATGTCAAATGAAGAACGATCTGATGGTGGTTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR CCA 90 bp CCTTTGGCCTTTCTTCTTAAATTCCGCCTGTCTACCACAGGCACTTCCACTTCTAGATTCTACCACCAGTaGAACAAGATTTGTAGAGTC +
Preference number: 2 (lower is better)
Translates to: PLAFLLKFRLSTTGTSTSRFYHQ*NKICRV
Trigger: GACTCTACAAATCTTGTTCCACTGGTGGTAGAATCT...AGAAGTGGAAGTGCCTGTGGTAGACAGGCGGAATTTAAGAAGAAAGGCCAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR TCA 90 bp ATTAGAACAATACAGGGAAAATTAGCATGGCCCCTGTGCAAGGATGACACAAATGGCAGGAAGATCTGTTaGTTGGAGAATCACTCCATG +
Preference number: 2 (lower is better)
Translates to: IRTIQGKLAWPLCKDDTNGRKIC*LENHSM
Trigger: CATGGAGTGATTCTCCAATCAACAGATCTTCCTGCC...ATTTGTGTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTGTATTGTTCTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR TCA 90 bp ATTAGAACAATACAGGGAAAATTAGCATGGCCCCTGTGCAAGGATGACACAAATAGCCTCCAATATGATTaGAGCCCTTGTAACCACAGC +
Preference number: 2 (lower is better)
Translates to: IRTIQGKLAWPLCKDDTNSLQYD*SPCNHS
Trigger: GCTGTGGTTACAAGGGCTTCAATCATATTGGAGGCT...ATTTGTGTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTGTATTGTTCTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR TCA 90 bp CCTTTGGCCTTTCTTCTTAAATTCCGCCTGTCTACCACAGGCACTTCCACTTCTTTACCACTTCGAGTATaGGTGGAAACAGATGTTTTA +
Preference number: 2 (lower is better)
Translates to: PLAFLLKFRLSTTGTSTSLPLRV*VETDVL
Trigger: TAAAACATCTGTTTCCACTCATACTCGAAGTGGTAA...AGAAGTGGAAGTGCCTGTGGTAGACAGGCGGAATTTAAGAAGAAAGGCCAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR GCA 90 bp GGAAAACCACCATCAGATCGTTCTTCATTTGACATAGTAGCAACATTGTCTGAATGGGGTCTTATCTGGTaGATCTACCTCAGGGGGTTT +
Preference number: 2 (lower is better)
Translates to: GKPPSDRSSFDIVATLSEWGLIW*IYLRGF
Trigger: AAACCCCCTGAGGTAGATGCACCAGATAAGACCCCA...TTCAGACAATGTTGCTACTATGTCAAATGAAGAACGATCTGATGGTGGTTTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR CCA 90 bp CAAATAAGTTCACAAAGGACTATGTGTAATGTGACTGGACATTCAACAACTAGAACGTGGGGTCTTATCTaGTGCATCTACCTCAGGGGG +
Preference number: 2 (lower is better)
Translates to: QISSQRTMCNVTGHSTTRTWGLI*CIYLRG
Trigger: CCCCCTGAGGTAGATGCACCAGATAAGACCCCACGT...TCTAGTTGTTGAATGTCCAGTCACATTACACATAGTCCTTTGTGAACTTATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR CAA 90 bp GGAAAACCACCATCAGATCGTTCTTCATTTGACATAGTAGCAACATaGTCTGAACTCCCAAGATGTGCTTTCTTTCTTGGAAGTAGGGAC +
Preference number: 2 (lower is better)
Translates to: GKPPSDRSSFDIVAT*SELPRCAFFLGSRD
Trigger: GTCCCTACTTCCAAGAAAGAAAGCACATCTTGGGAGTTCAGACAATGTTGCTACTATGTCAAATGAAGAACGATCTGATGGTGGTTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR TCA 90 bp AGTATTAGGAGACAAATTCTCAGAGACCGGTTCTTCGGAAAATTCAGCTATCACAAGTCCTCCAGCATGTaGAGCCCAAAATCTTTACCT +
Preference number: 2 (lower is better)
Translates to: SIRRQILRDRFFGKFSYHKSSSM*SPKSLP
Trigger: AGGTAAAGATTTTGGGCTTCACATGCTGGAGGACTT...GTGATAGCTGAATTTTCCGAAGAACCGGTCTCTGAGAATTTGTCTCCTAATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR TCA 90 bp ATTAGAACAATACAGGGAAAATTAGCATGGCCCCTGTGCAAGGATGACACAAATTGCAAGCTGTATACATaGGAGAAGACAGTGGATACC +
Preference number: 2 (lower is better)
Translates to: IRTIQGKLAWPLCKDDTNCKLYT*EKTVDT
Trigger: GGTATCCACTGTCTTCTCTCATGTATACAGCTTGCA...ATTTGTGTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTGTATTGTTCTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR TCA 90 bp AGGAGACAAATTCTCAGAGACCGGTTCTTCGGAAAATTCAGCTATCACAGAGTTTGCATCTCACTAGACTaGTTGTCTTCAGTTCTTGCT +
Preference number: 2 (lower is better)
Translates to: RRQILRDRFFGKFSYHRVCISLD*LSSVLA
Trigger: AGCAAGAACTGAAGACAATCAGTCTAGTGAGATGCA...AACTCTGTGATAGCTGAATTTTCCGAAGAACCGGTCTCTGAGAATTTGTCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR TCA 90 bp GTCTTCAAGTTCAACCTCTATCAAAGAACTCTGAGGAAGAGCAGTAGATGTTTCATCCATCAACATTTCTaGGTCAGGTATACGTGGGGT +
Preference number: 2 (lower is better)
Translates to: VFKFNLYQRTLRKSSRCFIHQHF*VRYTWG
Trigger: ACCCCACGTATACCTGACTCAGAAATGTTGATGGAT...GAAACATCTACTGCTCTTCCTCAGAGTTCTTTGATAGAGGTTGAACTTGAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR GCA 90 bp ATTAGAACAATACAGGGAAAATTAGCATGGCCCCTGTGCAAGGATGACACAAATCTTAACAGGCCAGCTTaGAACCAGTACTCAGTACAA +
Preference number: 2 (lower is better)
Translates to: IRTIQGKLAWPLCKDDTNLNRPA*NQYSVQ
Trigger: TTGTACTGAGTACTGGTTGCAAGCTGGCCTGTTAAG...ATTTGTGTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTGTATTGTTCTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR CCA 90 bp TGTCTGAACTCCCAAGATGTGCTTTCTTTCTTGGAAGTAGGGACAATTTCTCTTTCCCAAAGGAGTTCATaGTCTCCTGGATACTTCTCA +
Preference number: 2 (lower is better)
Translates to: CLNSQDVLSFLEVGTISLSQRSS*SPGYFS
Trigger: TGAGAAGTATCCAGGAGACCATGAACTCCTTTGGGA...AAGAGAAATTGTCCCTACTTCCAAGAAAGAAAGCACATCTTGGGAGTTCAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR CCA 90 bp TCTTCAAATTTTCCTAGGCCTTTGTTATGGCAACACAATATATACTTAACAGGCCTGGGTTTCCAGTGCTaGCCGTGCATCTCTATCACT +
Preference number: 2 (lower is better)
Translates to: SSNFPRPLLWQHNIYLTGLGFQC*PCISIT
Trigger: AGTGATAGAGATGCACGGCCAGCACTGGAAACCCAG...GCCTGTTAAGTATATATTGTGTTGCCATAACAAAGGCCTAGGAAAATTTGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR CCA 90 bp CAAATAAGTTCACAAAGGACTATGTGTAATGTGACTGGACATTCAACAACTAGATTGCTTCTCTTGCTGTaGCTGGGTTTCCAGTGCTGG +
Preference number: 2 (lower is better)
Translates to: QISSQRTMCNVTGHSTTRLLLLL*LGFQCW
Trigger: CCAGCACTGGAAACCCAGCCACAGCAAGAGAAGCAA...TCTAGTTGTTGAATGTCCAGTCACATTACACATAGTCCTTTGTGAACTTATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR TCA 90 bp ATATACTTAACAGGCCAGCTTGCAACCAGTACTCAGTACAAATCAAAGGATGATTGCAAGCTGTATACATaGGAGAAGACAGTGGATACC +
Preference number: 2 (lower is better)
Translates to: IYLTGQLATSTQYKSKDDCKLYT*EKTVDT
Trigger: GGTATCCACTGTCTTCTCTCATGTATACAGCTTGCA...ATCATCCTTTGATTTGTACTGAGTACTGGTTGCAAGCTGGCCTGTTAAGTATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR TCA 90 bp GTCTTCAAGTTCAACCTCTATCAAAGAACTCTGAGGAAGAGCAGTAGATGTTTCACAGATGTTTTATCATaGCCTTCGGAAGTGCTTGCA +
Preference number: 2 (lower is better)
Translates to: VFKFNLYQRTLRKSSRCFTDVLS*PSEVLA
Trigger: TGCAAGCACTTCCGAAGGTCATGATAAAACATCTGT...GAAACATCTACTGCTCTTCCTCAGAGTTCTTTGATAGAGGTTGAACTTGAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR TCA 90 bp CAAATAAGTTCACAAAGGACTATGTGTAATGTGACTGGACATTCAACAACTAGATACCTCAGGGGGTTTTaGAGATTCTACCACCAGTGG +
Preference number: 2 (lower is better)
Translates to: QISSQRTMCNVTGHSTTRYLRGF*RFYHQW
Trigger: CCACTGGTGGTAGAATCTTCAAAACCCCCTGAGGTA...TCTAGTTGTTGAATGTCCAGTCACATTACACATAGTCCTTTGTGAACTTATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR TCA 90 bp GGAAAACCACCATCAGATCGTTCTTCATTTGACATAGTAGCAACATTGTCTGAAATCCATCAACATTTCTaGGTCAGGTATACGTGGGGT +
Preference number: 2 (lower is better)
Translates to: GKPPSDRSSFDIVATLSEIHQHF*VRYTWG
Trigger: ACCCCACGTATACCTGACTCAGAAATGTTGATGGAT...TTCAGACAATGTTGCTACTATGTCAAATGAAGAACGATCTGATGGTGGTTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR GCA 90 bp ATTAGAACAATACAGGGAAAATTAGCATGGCCCCTGTGCAAGGATGACACAAATCAAGATTTAAGGAGATaGCTTAGGAAGGAGCCTCAT +
Preference number: 2 (lower is better)
Translates to: IRTIQGKLAWPLCKDDTNQDLRR*LRKEPH
Trigger: ATGAGGCTCCTTCCTAAGGCATCTCCTTAAATCTTG...ATTTGTGTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTGTATTGTTCTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR GCA 90 bp ATTAGAACAATACAGGGAAAATTAGCATGGCCCCTGTGCAAGGATGACACAAATGTATTCTGGAACAGATaGAGGACCATATTCTCCAGA +
Preference number: 2 (lower is better)
Translates to: IRTIQGKLAWPLCKDDTNVFWNR*RTIFSR
Trigger: TCTGGAGAATATGGTCCTGCATCTGTTCCAGAATAC...ATTTGTGTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTGTATTGTTCTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR GCA 90 bp TGTCTGAACTCCCAAGATGTGCTTTCTTTCTTGGAAGTAGGGACAATTTCTCTTCATGACCTTCGGAAGTaGTTGCAAAGGCATCTTTTA +
Preference number: 2 (lower is better)
Translates to: CLNSQDVLSFLEVGTISLHDLRK*LQRHLL
Trigger: TAAAAGATGCCTTTGCAAGCACTTCCGAAGGTCATG...AAGAGAAATTGTCCCTACTTCCAAGAAAGAAAGCACATCTTGGGAGTTCAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR CCA 90 bp CAAATAAGTTCACAAAGGACTATGTGTAATGTGACTGGACATTCAACAACTAGACAGGGAAAATTAGCATaGCCCCTGTGCAAGGATGAC +
Preference number: 2 (lower is better)
Translates to: QISSQRTMCNVTGHSTTRQGKLA*PLCKDD
Trigger: GTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTG...TCTAGTTGTTGAATGTCCAGTCACATTACACATAGTCCTTTGTGAACTTATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR CCA 90 bp GTCTTCAAGTTCAACCTCTATCAAAGAACTCTGAGGAAGAGCAGTAGATGTTTCTCTTGCTTCGTATTCTaGAACAGATGCAGGACCATA +
Preference number: 2 (lower is better)
Translates to: VFKFNLYQRTLRKSSRCFSCFVF*NRCRTI
Trigger: TATGGTCCTGCATCTGTTCCAGAATACGAAGCAAGA...GAAACATCTACTGCTCTTCCTCAGAGTTCTTTGATAGAGGTTGAACTTGAAGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR CCA 90 bp GTCTTCAAGTTCAACCTCTATCAAAGAACTCTGAGGAAGAGCAGTAGATGTTTCGCTGTAAGTGAAGTCTaGGAGGTCTTTTCATCTTCA +
Preference number: 2 (lower is better)
Translates to: VFKFNLYQRTLRKSSRCFAVSEV*EVFSSS
Trigger: TGAAGATGAAAAGACCTCCCAGACTTCACTTACAGC...GAAACATCTACTGCTCTTCCTCAGAGTTCTTTGATAGAGGTTGAACTTGAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR CCA 90 bp GTCTTCAAGTTCAACCTCTATCAAAGAACTCTGAGGAAGAGCAGTAGATGTTTCAGCTATCACAGAGTTTaGAAAACCACCATCAGATCG +
Preference number: 2 (lower is better)
Translates to: VFKFNLYQRTLRKSSRCFSYHRV*KTTIRS
Trigger: CGATCTGATGGTGGTTTTCCAAACTCTGTGATAGCT...GAAACATCTACTGCTCTTCCTCAGAGTTCTTTGATAGAGGTTGAACTTGAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR TCA 90 bp CAAATAAGTTCACAAAGGACTATGTGTAATGTGACTGGACATTCAACAACTAGAGGCAGGAAGATCTGTTaGTTGGAGAATCACTCCATG +
Preference number: 2 (lower is better)
Translates to: QISSQRTMCNVTGHSTTRGRKIC*LENHSM
Trigger: CATGGAGTGATTCTCCAATCAACAGATCTTCCTGCC...TCTAGTTGTTGAATGTCCAGTCACATTACACATAGTCCTTTGTGAACTTATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR TCA 90 bp TCTTCAAATTTTCCTAGGCCTTTGTTATGGCAACACAATATATACTTAACAGGCGGCAGGAAGATCTGTTaGTTGGAGAATCACTCCATG +
Preference number: 2 (lower is better)
Translates to: SSNFPRPLLWQHNIYLTGGRKIC*LENHSM
Trigger: CATGGAGTGATTCTCCAATCAACAGATCTTCCTGCC...GCCTGTTAAGTATATATTGTGTTGCCATAACAAAGGCCTAGGAAAATTTGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR TCA 90 bp CAAATAAGTTCACAAAGGACTATGTGTAATGTGACTGGACATTCAACAACTAGAAGCCTCCAATATGATTaGAGCCCTTGTAACCACAGC +
Preference number: 2 (lower is better)
Translates to: QISSQRTMCNVTGHSTTRSLQYD*SPCNHS
Trigger: GCTGTGGTTACAAGGGCTTCAATCATATTGGAGGCT...TCTAGTTGTTGAATGTCCAGTCACATTACACATAGTCCTTTGTGAACTTATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR TCA 90 bp TCTTCAAATTTTCCTAGGCCTTTGTTATGGCAACACAATATATACTTAACAGGCTTTGTAATGCTCTGGTaGCTGGTATTCGCTGGTACC +
Preference number: 2 (lower is better)
Translates to: SSNFPRPLLWQHNIYLTGFVMLW*LVFAGT
Trigger: GGTACCAGCGAATACCAGTCACCAGAGCATTACAAA...GCCTGTTAAGTATATATTGTGTTGCCATAACAAAGGCCTAGGAAAATTTGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR TCA 90 bp CAAATAAGTTCACAAAGGACTATGTGTAATGTGACTGGACATTCAACAACTAGATTTGTAATGCTCTGGTaGCTGGTATTCGCTGGTACC +
Preference number: 2 (lower is better)
Translates to: QISSQRTMCNVTGHSTTRFVMLW*LVFAGT
Trigger: GGTACCAGCGAATACCAGTCACCAGAGCATTACAAA...TCTAGTTGTTGAATGTCCAGTCACATTACACATAGTCCTTTGTGAACTTATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR GCA 90 bp ATATACTTAACAGGCCAGCTTGCAACCAGTACTCAGTACAAATCAAAGGATGATCAAGATTTAAGGAGATaGCTTAGGAAGGAGCCTCAT +
Preference number: 2 (lower is better)
Translates to: IYLTGQLATSTQYKSKDDQDLRR*LRKEPH
Trigger: ATGAGGCTCCTTCCTAAGGCATCTCCTTAAATCTTG...ATCATCCTTTGATTTGTACTGAGTACTGGTTGCAAGCTGGCCTGTTAAGTATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR GCA 90 bp CAAATAAGTTCACAAAGGACTATGTGTAATGTGACTGGACATTCAACAACTAGATCTAACATTGTGGGGTaGACCTCCAAACCTACCCAA +
Preference number: 2 (lower is better)
Translates to: QISSQRTMCNVTGHSTTRSNIVG*TSKPTQ
Trigger: TTGGGTAGGTTTGGAGGTGCACCCCACAATGTTAGA...TCTAGTTGTTGAATGTCCAGTCACATTACACATAGTCCTTTGTGAACTTATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR GCA 90 bp ATTAGAACAATACAGGGAAAATTAGCATGGCCCCTGTGCAAGGATGACACAAATATCCACAGCTTTTTCTaGCGATTGTGTAAACTGATC +
Preference number: 2 (lower is better)
Translates to: IRTIQGKLAWPLCKDDTNIHSFF*RLCKLI
Trigger: GATCAGTTTACACAATCGGCAGAAAAAGCTGTGGAT...ATTTGTGTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTGTATTGTTCTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR CCA 90 bp ATATACTTAACAGGCCAGCTTGCAACCAGTACTCAGTACAAATCAAAGGATGATGTAGAATTAGGGAGGTaGCAAGATTTAAGGAGATGC +
Preference number: 2 (lower is better)
Translates to: IYLTGQLATSTQYKSKDDVELGR*QDLRRC
Trigger: GCATCTCCTTAAATCTTGCCACCTCCCTAATTCTAC...ATCATCCTTTGATTTGTACTGAGTACTGGTTGCAAGCTGGCCTGTTAAGTATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR CCA 90 bp GGAAAACCACCATCAGATCGTTCTTCATTTGACATAGTAGCAACATTGTCTGAAGCTGTAAGTGAAGTCTaGGAGGTCTTTTCATCTTCA +
Preference number: 2 (lower is better)
Translates to: GKPPSDRSSFDIVATLSEAVSEV*EVFSSS
Trigger: TGAAGATGAAAAGACCTCCCAGACTTCACTTACAGC...TTCAGACAATGTTGCTACTATGTCAAATGAAGAACGATCTGATGGTGGTTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR CCA 90 bp TGTCTGAACTCCCAAGATGTGCTTTCTTTCTTGGAAGTAGGGACAATTTCTCTTAGATTCTACCACCAGTaGAACAAGATTTGTAGAGTC +
Preference number: 2 (lower is better)
Translates to: CLNSQDVLSFLEVGTISLRFYHQ*NKICRV
Trigger: GACTCTACAAATCTTGTTCCACTGGTGGTAGAATCT...AAGAGAAATTGTCCCTACTTCCAAGAAAGAAAGCACATCTTGGGAGTTCAGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR TCA 90 bp ATTAGAACAATACAGGGAAAATTAGCATGGCCCCTGTGCAAGGATGACACAAATCTTAATTTATCTATCTaGTCAGGACCAGAAGTCCAA +
Preference number: 2 (lower is better)
Translates to: IRTIQGKLAWPLCKDDTNLNLSI*SGPEVQ
Trigger: TTGGACTTCTGGTCCTGATCAGATAGATAAATTAAG...ATTTGTGTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTGTATTGTTCTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR TCA 90 bp ATTAGAACAATACAGGGAAAATTAGCATGGCCCCTGTGCAAGGATGACACAAATCAAAATTTACTGACCTaGCATCAGCTTACTATAGAC +
Preference number: 2 (lower is better)
Translates to: IRTIQGKLAWPLCKDDTNQNLLT*HQLTID
Trigger: GTCTATAGTAAGCTGATGTCAGGTCAGTAAATTTTG...ATTTGTGTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTGTATTGTTCTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR TCA 90 bp TCTTCAAATTTTCCTAGGCCTTTGTTATGGCAACACAATATATACTTAACAGGCTCACACATCAAGAGTTaGGCCAGTGAGCTCAATCTT +
Preference number: 2 (lower is better)
Translates to: SSNFPRPLLWQHNIYLTGSHIKS*ASELNL
Trigger: AAGATTGAGCTCACTGGCTCAACTCTTGATGTGTGA...GCCTGTTAAGTATATATTGTGTTGCCATAACAAAGGCCTAGGAAAATTTGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR TCA 90 bp CAAATAAGTTCACAAAGGACTATGTGTAATGTGACTGGACATTCAACAACTAGATCACACATCAAGAGTTaGGCCAGTGAGCTCAATCTT +
Preference number: 2 (lower is better)
Translates to: QISSQRTMCNVTGHSTTRSHIKS*ASELNL
Trigger: AAGATTGAGCTCACTGGCTCAACTCTTGATGTGTGA...TCTAGTTGTTGAATGTCCAGTCACATTACACATAGTCCTTTGTGAACTTATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR TCA 90 bp TGTCTGAACTCCCAAGATGTGCTTTCTTTCTTGGAAGTAGGGACAATTTCTCTTCTAAATTCAGAATCCTaGAACCGCTTTCCAATCTTT +
Preference number: 2 (lower is better)
Translates to: CLNSQDVLSFLEVGTISLLNSES*NRFPIF
Trigger: AAAGATTGGAAAGCGGTTTCAGGATTCTGAATTTAG...AAGAGAAATTGTCCCTACTTCCAAGAAAGAAAGCACATCTTGGGAGTTCAGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR TCA 90 bp ATTAGAACAATACAGGGAAAATTAGCATGGCCCCTGTGCAAGGATGACACAAATCTAAATTCAGAATCCTaGAACCGCTTTCCAATCTTT +
Preference number: 2 (lower is better)
Translates to: IRTIQGKLAWPLCKDDTNLNSES*NRFPIF
Trigger: AAAGATTGGAAAGCGGTTTCAGGATTCTGAATTTAG...ATTTGTGTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTGTATTGTTCTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR TCA 90 bp AGTATTAGGAGACAAATTCTCAGAGACCGGTTCTTCGGAAAATTCAGCTATCACAGATCGTTCTTCATTTaGCATAGTAGCAACATTGTC +
Preference number: 2 (lower is better)
Translates to: SIRRQILRDRFFGKFSYHRSFFI*HSSNIV
Trigger: GACAATGTTGCTACTATGTCAAATGAAGAACGATCT...GTGATAGCTGAATTTTCCGAAGAACCGGTCTCTGAGAATTTGTCTCCTAATACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR GCA 90 bp TGTCTGAACTCCCAAGATGTGCTTTCTTTCTTGGAAGTAGGGACAATTTCTCTTTTGTCCTGTGCCCCATaGTGTTTATTAATTACCATA +
Preference number: 2 (lower is better)
Translates to: CLNSQDVLSFLEVGTISLLSCAP*CLLITI
Trigger: TATGGTAATTAATAAACAGCATGGGGCACAGGACAA...AAGAGAAATTGTCCCTACTTCCAAGAAAGAAAGCACATCTTGGGAGTTCAGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR GCA 90 bp CAAATAAGTTCACAAAGGACTATGTGTAATGTGACTGGACATTCAACAACTAGACTTAACAGGCCAGCTTaGAACCAGTACTCAGTACAA +
Preference number: 2 (lower is better)
Translates to: QISSQRTMCNVTGHSTTRLNRPA*NQYSVQ
Trigger: TTGTACTGAGTACTGGTTGCAAGCTGGCCTGTTAAG...TCTAGTTGTTGAATGTCCAGTCACATTACACATAGTCCTTTGTGAACTTATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR GCA 90 bp TCTTCAAATTTTCCTAGGCCTTTGTTATGGCAACACAATATATACTTAACAGGCCTTAACAGGCCAGCTTaGAACCAGTACTCAGTACAA +
Preference number: 2 (lower is better)
Translates to: SSNFPRPLLWQHNIYLTGLNRPA*NQYSVQ
Trigger: TTGTACTGAGTACTGGTTGCAAGCTGGCCTGTTAAG...GCCTGTTAAGTATATATTGTGTTGCCATAACAAAGGCCTAGGAAAATTTGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR GCA 90 bp ATTAGAACAATACAGGGAAAATTAGCATGGCCCCTGTGCAAGGATGACACAAATCCTTTTCATCAGATGTaGCTTCATCCATCAACATTT +
Preference number: 2 (lower is better)
Translates to: IRTIQGKLAWPLCKDDTNPFHQM*LHPSTF
Trigger: AAATGTTGATGGATGAAGGCACATCTGATGAAAAGG...ATTTGTGTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTGTATTGTTCTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR GCA 90 bp TGTCTGAACTCCCAAGATGTGCTTTCTTTCTTGGAAGTAGGGACAATTTCTCTTCCTTTTCATCAGATGTaGCTTCATCCATCAACATTT +
Preference number: 2 (lower is better)
Translates to: CLNSQDVLSFLEVGTISLPFHQM*LHPSTF
Trigger: AAATGTTGATGGATGAAGGCACATCTGATGAAAAGG...AAGAGAAATTGTCCCTACTTCCAAGAAAGAAAGCACATCTTGGGAGTTCAGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR GCA 90 bp ATATACTTAACAGGCCAGCTTGCAACCAGTACTCAGTACAAATCAAAGGATGATAATTTCTCTTCCATGTaGCCCTTTTCATCAGATGTG +
Preference number: 2 (lower is better)
Translates to: IYLTGQLATSTQYKSKDDNFSSM*PFSSDV
Trigger: CACATCTGATGAAAAGGGGCACATGGAAGAGAAATT...ATCATCCTTTGATTTGTACTGAGTACTGGTTGCAAGCTGGCCTGTTAAGTATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR GCA 90 bp GGAAAACCACCATCAGATCGTTCTTCATTTGACATAGTAGCAACATTGTCTGAAAATTTCTCTTCCATGTaGCCCTTTTCATCAGATGTG +
Preference number: 2 (lower is better)
Translates to: GKPPSDRSSFDIVATLSENFSSM*PFSSDV
Trigger: CACATCTGATGAAAAGGGGCACATGGAAGAGAAATT...TTCAGACAATGTTGCTACTATGTCAAATGAAGAACGATCTGATGGTGGTTTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR CCA 90 bp TCTTCAAATTTTCCTAGGCCTTTGTTATGGCAACACAATATATACTTAACAGGCATAGGTCTAACATTGTaGGGTGCACCTCCAAACCTA +
Preference number: 2 (lower is better)
Translates to: SSNFPRPLLWQHNIYLTGIGLTL*GAPPNL
Trigger: TAGGTTTGGAGGTGCACCCCACAATGTTAGACCTAT...GCCTGTTAAGTATATATTGTGTTGCCATAACAAAGGCCTAGGAAAATTTGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR TCA 90 bp ATATACTTAACAGGCCAGCTTGCAACCAGTACTCAGTACAAATCAAAGGATGATCTTAATTTATCTATCTaGTCAGGACCAGAAGTCCAA +
Preference number: 2 (lower is better)
Translates to: IYLTGQLATSTQYKSKDDLNLSI*SGPEVQ
Trigger: TTGGACTTCTGGTCCTGATCAGATAGATAAATTAAG...ATCATCCTTTGATTTGTACTGAGTACTGGTTGCAAGCTGGCCTGTTAAGTATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR TCA 90 bp GGAAAACCACCATCAGATCGTTCTTCATTTGACATAGTAGCAACATTGTCTGAACTTAATTTATCTATCTaGTCAGGACCAGAAGTCCAA +
Preference number: 2 (lower is better)
Translates to: GKPPSDRSSFDIVATLSELNLSI*SGPEVQ
Trigger: TTGGACTTCTGGTCCTGATCAGATAGATAAATTAAG...TTCAGACAATGTTGCTACTATGTCAAATGAAGAACGATCTGATGGTGGTTTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR TCA 90 bp ATATACTTAACAGGCCAGCTTGCAACCAGTACTCAGTACAAATCAAAGGATGATTTACCACTTCGAGTATaGGTGGAAACAGATGTTTTA +
Preference number: 2 (lower is better)
Translates to: IYLTGQLATSTQYKSKDDLPLRV*VETDVL
Trigger: TAAAACATCTGTTTCCACTCATACTCGAAGTGGTAA...ATCATCCTTTGATTTGTACTGAGTACTGGTTGCAAGCTGGCCTGTTAAGTATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR TCA 90 bp CAAATAAGTTCACAAAGGACTATGTGTAATGTGACTGGACATTCAACAACTAGAAGTAGCAACATTGTCTaGACTCCCAAGATGTGCTTT +
Preference number: 2 (lower is better)
Translates to: QISSQRTMCNVTGHSTTRSSNIV*TPKMCF
Trigger: AAAGCACATCTTGGGAGTTCAGACAATGTTGCTACT...TCTAGTTGTTGAATGTCCAGTCACATTACACATAGTCCTTTGTGAACTTATTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR TCA 90 bp ATATACTTAACAGGCCAGCTTGCAACCAGTACTCAGTACAAATCAAAGGATGATAGATCGTTCTTCATTTaGCATAGTAGCAACATTGTC +
Preference number: 2 (lower is better)
Translates to: IYLTGQLATSTQYKSKDDRSFFI*HSSNIV
Trigger: GACAATGTTGCTACTATGTCAAATGAAGAACGATCT...ATCATCCTTTGATTTGTACTGAGTACTGGTTGCAAGCTGGCCTGTTAAGTATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR GCA 90 bp ATATACTTAACAGGCCAGCTTGCAACCAGTACTCAGTACAAATCAAAGGATGATTTGTCCTGTGCCCCATaGTGTTTATTAATTACCATA +
Preference number: 2 (lower is better)
Translates to: IYLTGQLATSTQYKSKDDLSCAP*CLLITI
Trigger: TATGGTAATTAATAAACAGCATGGGGCACAGGACAA...ATCATCCTTTGATTTGTACTGAGTACTGGTTGCAAGCTGGCCTGTTAAGTATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR GCA 90 bp GGAAAACCACCATCAGATCGTTCTTCATTTGACATAGTAGCAACATTGTCTGAATTGTCCTGTGCCCCATaGTGTTTATTAATTACCATA +
Preference number: 2 (lower is better)
Translates to: GKPPSDRSSFDIVATLSELSCAP*CLLITI
Trigger: TATGGTAATTAATAAACAGCATGGGGCACAGGACAA...TTCAGACAATGTTGCTACTATGTCAAATGAAGAACGATCTGATGGTGGTTTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR GCA 90 bp CAAATAAGTTCACAAAGGACTATGTGTAATGTGACTGGACATTCAACAACTAGACAAGATTTAAGGAGATaGCTTAGGAAGGAGCCTCAT +
Preference number: 2 (lower is better)
Translates to: QISSQRTMCNVTGHSTTRQDLRR*LRKEPH
Trigger: ATGAGGCTCCTTCCTAAGGCATCTCCTTAAATCTTG...TCTAGTTGTTGAATGTCCAGTCACATTACACATAGTCCTTTGTGAACTTATTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR GCA 90 bp AGTATTAGGAGACAAATTCTCAGAGACCGGTTCTTCGGAAAATTCAGCTATCACTACTTCTCAAAGTATTaGTTGCAAGCTGTATACATG +
Preference number: 2 (lower is better)
Translates to: SIRRQILRDRFFGKFSYHYFSKY*LQAVYM
Trigger: CATGTATACAGCTTGCAAGCAATACTTTGAGAAGTA...GTGATAGCTGAATTTTCCGAAGAACCGGTCTCTGAGAATTTGTCTCCTAATACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR GCA 90 bp GTCTTCAAGTTCAACCTCTATCAAAGAACTCTGAGGAAGAGCAGTAGATGTTTCTACTTCTCAAAGTATTaGTTGCAAGCTGTATACATG +
Preference number: 2 (lower is better)
Translates to: VFKFNLYQRTLRKSSRCFYFSKY*LQAVYM
Trigger: CATGTATACAGCTTGCAAGCAATACTTTGAGAAGTA...GAAACATCTACTGCTCTTCCTCAGAGTTCTTTGATAGAGGTTGAACTTGAAGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR GCA 90 bp TCTTCAAATTTTCCTAGGCCTTTGTTATGGCAACACAATATATACTTAACAGGCGTATTCTGGAACAGATaGAGGACCATATTCTCCAGA +
Preference number: 2 (lower is better)
Translates to: SSNFPRPLLWQHNIYLTGVFWNR*RTIFSR
Trigger: TCTGGAGAATATGGTCCTGCATCTGTTCCAGAATAC...GCCTGTTAAGTATATATTGTGTTGCCATAACAAAGGCCTAGGAAAATTTGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR GCA 90 bp CAAATAAGTTCACAAAGGACTATGTGTAATGTGACTGGACATTCAACAACTAGACATGACCTTCGGAAGTaGTTGCAAAGGCATCTTTTA +
Preference number: 2 (lower is better)
Translates to: QISSQRTMCNVTGHSTTRHDLRK*LQRHLL
Trigger: TAAAAGATGCCTTTGCAAGCACTTCCGAAGGTCATG...TCTAGTTGTTGAATGTCCAGTCACATTACACATAGTCCTTTGTGAACTTATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR CCA 90 bp CAAATAAGTTCACAAAGGACTATGTGTAATGTGACTGGACATTCAACAACTAGAGTAGAATTAGGGAGGTaGCAAGATTTAAGGAGATGC +
Preference number: 2 (lower is better)
Translates to: QISSQRTMCNVTGHSTTRVELGR*QDLRRC
Trigger: GCATCTCCTTAAATCTTGCCACCTCCCTAATTCTAC...TCTAGTTGTTGAATGTCCAGTCACATTACACATAGTCCTTTGTGAACTTATTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR TCA 90 bp CAAATAAGTTCACAAAGGACTATGTGTAATGTGACTGGACATTCAACAACTAGAGGAGCCTCATACTTCTaGAATATAGATGTTAACTGG +
Preference number: 2 (lower is better)
Translates to: QISSQRTMCNVTGHSTTRGASYF*NIDVNW
Trigger: CCAGTTAACATCTATATTTCAGAAGTATGAGGCTCC...TCTAGTTGTTGAATGTCCAGTCACATTACACATAGTCCTTTGTGAACTTATTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR TCA 90 bp TCTTCAAATTTTCCTAGGCCTTTGTTATGGCAACACAATATATACTTAACAGGCGGACTATGTGTAATGTaGCTGGACATTCAACAACTA +
Preference number: 2 (lower is better)
Translates to: SSNFPRPLLWQHNIYLTGGLCVM*LDIQQL
Trigger: TAGTTGTTGAATGTCCAGTCACATTACACATAGTCC...GCCTGTTAAGTATATATTGTGTTGCCATAACAAAGGCCTAGGAAAATTTGAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR TCA 90 bp TCTTCAAATTTTCCTAGGCCTTTGTTATGGCAACACAATATATACTTAACAGGCCTTAATTTATCTATCTaGTCAGGACCAGAAGTCCAA +
Preference number: 2 (lower is better)
Translates to: SSNFPRPLLWQHNIYLTGLNLSI*SGPEVQ
Trigger: TTGGACTTCTGGTCCTGATCAGATAGATAAATTAAG...GCCTGTTAAGTATATATTGTGTTGCCATAACAAAGGCCTAGGAAAATTTGAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR TCA 90 bp TCTTCAAATTTTCCTAGGCCTTTGTTATGGCAACACAATATATACTTAACAGGCCCAAACAAAATTTACTaGCCTGACATCAGCTTACTA +
Preference number: 2 (lower is better)
Translates to: SSNFPRPLLWQHNIYLTGPNKIY*PDISLL
Trigger: TAGTAAGCTGATGTCAGGTCAGTAAATTTTGTTTGG...GCCTGTTAAGTATATATTGTGTTGCCATAACAAAGGCCTAGGAAAATTTGAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR GCA 90 bp CAAATAAGTTCACAAAGGACTATGTGTAATGTGACTGGACATTCAACAACTAGATTGTCCTGTGCCCCATaGTGTTTATTAATTACCATA +
Preference number: 2 (lower is better)
Translates to: QISSQRTMCNVTGHSTTRLSCAP*CLLITI
Trigger: TATGGTAATTAATAAACAGCATGGGGCACAGGACAA...TCTAGTTGTTGAATGTCCAGTCACATTACACATAGTCCTTTGTGAACTTATTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR GCA 90 bp CAAATAAGTTCACAAAGGACTATGTGTAATGTGACTGGACATTCAACAACTAGAGAAATTTTTGTCCTGTaGCCCATGCTGTTTATTAAT +
Preference number: 2 (lower is better)
Translates to: QISSQRTMCNVTGHSTTREIFVL*PMLFIN
Trigger: ATTAATAAACAGCATGGGGCACAGGACAAAAATTTC...TCTAGTTGTTGAATGTCCAGTCACATTACACATAGTCCTTTGTGAACTTATTTG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR CCA 90 bp CAAATAAGTTCACAAAGGACTATGTGTAATGTGACTGGACATTCAACAACTAGACACTTCGAGTATGAGTaGAAACAGATGTTTTATCAT +
Preference number: 2 (lower is better)
Translates to: QISSQRTMCNVTGHSTTRHFEYE*KQMFYH
Trigger: ATGATAAAACATCTGTTTCCACTCATACTCGAAGTG...TCTAGTTGTTGAATGTCCAGTCACATTACACATAGTCCTTTGTGAACTTATTTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR TCA 72 bp GGGCTCAGATACCCCCTCCTCACCCTGGTCTTCCAATaGGGAAGTAGTATTAGGAGACAAATTCTCAGAGAC +
Preference number: 3 (lower is better)
Translates to: GLRYPLLTLVFQ*GSSIRRQILRD
Trigger: GTCTCTGAGAATTTGTCTCCTAATACTACTTCCTCATTGGAAGACCAGGGTGAGGAGGGGGTATCTGAGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR CCA 72 bp ATCTTGCTTCTCTTGCTGTGGCTGGGTTTCCAGTGCTaGCCGTGCATCTCTATCACTGCTTTCATCCTCAAA +
Preference number: 3 (lower is better)
Translates to: ILLLLLWLGFQC*PCISITAFILK
Trigger: TTTGAGGATGAAAGCAGTGATAGAGATGCACGGCCAGCACTGGAAACCCAGCCACAGCAAGAGAAGCAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR TCA 72 bp AGTTGCTCGGAAGATGCTTCAGACTGCTCCTCTGACTaGTTCTTCTGTCCTGCATTCTGTGAAAATGGCACG +
Preference number: 3 (lower is better)
Translates to: SCSEDASDCSSD*FFCPAFCENGT
Trigger: CGTGCCATTTTCACAGAATGCAGGACAGAAGAATCAGTCAGAGGAGCAGTCTGAAGCATCTTCCGAGCAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR TCA 72 bp CTGCTATCCACAGCTTTTTCTGCCGATTGTGTAAACTaGTCCAGTTGCTCGGAAGATGCTTCAGACTGCTCC +
Preference number: 3 (lower is better)
Translates to: LLSTAFSADCVN*SSCSEDASDCS
Trigger: GGAGCAGTCTGAAGCATCTTCCGAGCAACTGGATCAGTTTACACAATCGGCAGAAAAAGCTGTGGATAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR CAA 90 bp CCTTTGGCCTTTCTTCTTAAATTCCGCCTGTCTACCACAGGCACTTCCACTTCTCAGCTATCACAGAGTTaGGAAAACCACCATCAGATC +
Preference number: 3 (lower is better)
Translates to: PLAFLLKFRLSTTGTSTSQLSQS*ENHHQI
Trigger: GATCTGATGGTGGTTTTCCAAACTCTGTGATAGCTG...AGAAGTGGAAGTGCCTGTGGTAGACAGGCGGAATTTAAGAAGAAAGGCCAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR TCA 72 bp CATCAAGGGCATAAGCCGGCAGGCAGGAAGATCTGTTaGTTGGAGAATCACTCCATGAGTTACAGAAGTAGA +
Preference number: 3 (lower is better)
Translates to: HQGHKPAGRKIC*LENHSMSYRSR
Trigger: TCTACTTCTGTAACTCATGGAGTGATTCTCCAATCAACAGATCTTCCTGCCTGCCGGCTTATGCCCTTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
3UTR CCA 72 bp GTATTGCTTGCAAGCTGTATACATGAGAGAAGACAGTaGATACCGCAAGCCAAGCGCATCTTCTGTAAAGGA +
Preference number: 3 (lower is better)
Translates to: VLLASCIHERRQ*IPQAKRIFCKG
Trigger: TCCTTTACAGAAGATGCGCTTGGCTTGCGGTATCCACTGTCTTCTCTCATGTATACAGCTTGCAAGCAATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR CAA 90 bp AGGAGACAAATTCTCAGAGACCGGTTCTTCGGAAAATTCAGCTATCACAGAGTTACCGCTTTCCAATCTTaGGCCGCTTTAGATTACCAC +
Preference number: 3 (lower is better)
Translates to: RRQILRDRFFGKFSYHRVTAFQS*AALDYH
Trigger: GTGGTAATCTAAAGCGGCCAAAGATTGGAAAGCGGT...AACTCTGTGATAGCTGAATTTTCCGAAGAACCGGTCTCTGAGAATTTGTCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR TCA 72 bp CTTTTCATCAGATGTGCCTTCATCCATCAACATTTCTaGGTCAGGTATACGTGGGGTCTTATCTGGTGCATC +
Preference number: 3 (lower is better)
Translates to: LFIRCAFIHQHF*VRYTWGLIWCI
Trigger: GATGCACCAGATAAGACCCCACGTATACCTGACTCAGAAATGTTGATGGATGAAGGCACATCTGATGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR CAA 90 bp GGAAAACCACCATCAGATCGTTCTTCATTTGACATAGTAGCAACATTGTCTGAACTACCTCAGGGGGTTTaGAAGATTCTACCACCAGTG +
Preference number: 3 (lower is better)
Translates to: GKPPSDRSSFDIVATLSELPQGV*KILPPV
Trigger: CACTGGTGGTAGAATCTTCAAAACCCCCTGAGGTAG...TTCAGACAATGTTGCTACTATGTCAAATGAAGAACGATCTGATGGTGGTTTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR GCA 72 bp TTCTTTCTTGGAAGTAGGGACAATTTCTCTTCCATGTaGCCCTTTTCATCAGATGTGCCTTCATCCATCAAC +
Preference number: 3 (lower is better)
Translates to: FFLGSRDNFSSM*PFSSDVPSSIN
Trigger: GTTGATGGATGAAGGCACATCTGATGAAAAGGGGCACATGGAAGAGAAATTGTCCCTACTTCCAAGAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR CCA 72 bp TGGGGGAATATAAATAAGACTGTAGAATTAGGGAGGTaGCAAGATTTAAGGAGATGCCTTAGGAAGGAGCCT +
Preference number: 3 (lower is better)
Translates to: WGNINKTVELGR*QDLRRCLRKEP
Trigger: AGGCTCCTTCCTAAGGCATCTCCTTAAATCTTGCCACCTCCCTAATTCTACAGTCTTATTTATATTCCCCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
3UTR CCA 72 bp TCTTTGGCCGCTTTAGATTACCACTTCGAGTATGAGTaGAAACAGATGTTTTATCATGACCTTCGGAAGTGC +
Preference number: 3 (lower is better)
Translates to: SLAALDYHFEYE*KQMFYHDLRKC
Trigger: GCACTTCCGAAGGTCATGATAAAACATCTGTTTCCACTCATACTCGAAGTGGTAATCTAAAGCGGCCAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR CAA 90 bp ATATACTTAACAGGCCAGCTTGCAACCAGTACTCAGTACAAATCAAAGGATGATCATATAGGTCTAACATaGTGGGGTGCACCTCCAAAC +
Preference number: 3 (lower is better)
Translates to: IYLTGQLATSTQYKSKDDHIGLT*WGAPPN
Trigger: GTTTGGAGGTGCACCCCACAATGTTAGACCTATATG...ATCATCCTTTGATTTGTACTGAGTACTGGTTGCAAGCTGGCCTGTTAAGTATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR CAA 90 bp ATATACTTAACAGGCCAGCTTGCAACCAGTACTCAGTACAAATCAAAGGATGATGACCTTCGGAAGTGCTaGCAAAGGCATCTTTTAGAG +
Preference number: 3 (lower is better)
Translates to: IYLTGQLATSTQYKSKDDDLRKC*QRHLLE
Trigger: CTCTAAAAGATGCCTTTGCAAGCACTTCCGAAGGTC...ATCATCCTTTGATTTGTACTGAGTACTGGTTGCAAGCTGGCCTGTTAAGTATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR GCA 72 bp ATTGTCTTCAGTTCTTGCTTCGTATTCTGGAACAGATaGAGGACCATATTCTCCAGACATAGGTCTTTTAGG +
Preference number: 3 (lower is better)
Translates to: IVFSSCFVFWNR*RTIFSRHRSFR
Trigger: CCTAAAAGACCTATGTCTGGAGAATATGGTCCTGCATCTGTTCCAGAATACGAAGCAAGAACTGAAGACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR GCA 72 bp ACAATTTCTCTTCCATGTGCCCCTTTTCATCAGATGTaGCTTCATCCATCAACATTTCTGAGTCAGGTATAC +
Preference number: 3 (lower is better)
Translates to: TISLPCAPFHQM*LHPSTFLSQVY
Trigger: GTATACCTGACTCAGAAATGTTGATGGATGAAGGCACATCTGATGAAAAGGGGCACATGGAAGAGAAATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR CAA 90 bp ATTAGAACAATACAGGGAAAATTAGCATGGCCCCTGTGCAAGGATGACACAAATAGCTTTTTCTGCCGATaGTGTAAACTGATCCAGTTG +
Preference number: 3 (lower is better)
Translates to: IRTIQGKLAWPLCKDDTNSFFCR*CKLIQL
Trigger: CAACTGGATCAGTTTACACAATCGGCAGAAAAAGCT...ATTTGTGTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTGTATTGTTCTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR CAA 90 bp CAAATAAGTTCACAAAGGACTATGTGTAATGTGACTGGACATTCAACAACTAGACATATAGGTCTAACATaGTGGGGTGCACCTCCAAAC +
Preference number: 3 (lower is better)
Translates to: QISSQRTMCNVTGHSTTRHIGLT*WGAPPN
Trigger: GTTTGGAGGTGCACCCCACAATGTTAGACCTATATG...TCTAGTTGTTGAATGTCCAGTCACATTACACATAGTCCTTTGTGAACTTATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR CAA 90 bp AGGAGACAAATTCTCAGAGACCGGTTCTTCGGAAAATTCAGCTATCACAGAGTTTTCTCAAAGTATTGCTaGCAAGCTGTATACATGAGA +
Preference number: 3 (lower is better)
Translates to: RRQILRDRFFGKFSYHRVFSKYC*QAVYMR
Trigger: TCTCATGTATACAGCTTGCAAGCAATACTTTGAGAA...AACTCTGTGATAGCTGAATTTTCCGAAGAACCGGTCTCTGAGAATTTGTCTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR CAA 90 bp AGGAGACAAATTCTCAGAGACCGGTTCTTCGGAAAATTCAGCTATCACAGAGTTGCAGTAGACTCCAATTaGTTTATTGAAGCTGTAAGT +
Preference number: 3 (lower is better)
Translates to: RRQILRDRFFGKFSYHRVAVDSN*FIEAVS
Trigger: ACTTACAGCTTCAATAAACAAATTGGAGTCTACTGC...AACTCTGTGATAGCTGAATTTTCCGAAGAACCGGTCTCTGAGAATTTGTCTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR CAA 90 bp ATTAGAACAATACAGGGAAAATTAGCATGGCCCCTGTGCAAGGATGACACAAATGATGTGCTTTCTTTCTaGGAAGTAGGGACAATTTCT +
Preference number: 3 (lower is better)
Translates to: IRTIQGKLAWPLCKDDTNDVLSF*EVGTIS
Trigger: AGAAATTGTCCCTACTTCCAAGAAAGAAAGCACATC...ATTTGTGTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTGTATTGTTCTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR CAA 90 bp TCTTCAAATTTTCCTAGGCCTTTGTTATGGCAACACAATATATACTTAACAGGCAGGCAGGAAGATCTGTaGATTGGAGAATCACTCCAT +
Preference number: 3 (lower is better)
Translates to: SSNFPRPLLWQHNIYLTGRQEDL*IGESLH
Trigger: ATGGAGTGATTCTCCAATCAACAGATCTTCCTGCCT...GCCTGTTAAGTATATATTGTGTTGCCATAACAAAGGCCTAGGAAAATTTGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR CAA 90 bp CAAATAAGTTCACAAAGGACTATGTGTAATGTGACTGGACATTCAACAACTAGAAGGCAGGAAGATCTGTaGATTGGAGAATCACTCCAT +
Preference number: 3 (lower is better)
Translates to: QISSQRTMCNVTGHSTTRRQEDL*IGESLH
Trigger: ATGGAGTGATTCTCCAATCAACAGATCTTCCTGCCT...TCTAGTTGTTGAATGTCCAGTCACATTACACATAGTCCTTTGTGAACTTATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR CAA 90 bp ATTAGAACAATACAGGGAAAATTAGCATGGCCCCTGTGCAAGGATGACACAAATCTTTTCATCTTCACCTaGAGAACTGCTAAATTCAGA +
Preference number: 3 (lower is better)
Translates to: IRTIQGKLAWPLCKDDTNLFIFT*RTAKFR
Trigger: TCTGAATTTAGCAGTTCTCAAGGTGAAGATGAAAAG...ATTTGTGTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTGTATTGTTCTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR CAA 90 bp TCTTCAAATTTTCCTAGGCCTTTGTTATGGCAACACAATATATACTTAACAGGCTGTAAACTGATCCAGTaGCTCGGAAGATGCTTCAGA +
Preference number: 3 (lower is better)
Translates to: SSNFPRPLLWQHNIYLTGCKLIQ*LGRCFR
Trigger: TCTGAAGCATCTTCCGAGCAACTGGATCAGTTTACA...GCCTGTTAAGTATATATTGTGTTGCCATAACAAAGGCCTAGGAAAATTTGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR TCA 72 bp AACTTCACTAGTGGAGTCTTCCTCTTCTGTTATAAGTaGGGTCTTAAGAGAATCGTCCATTATCTCACCATT +
Preference number: 3 (lower is better)
Translates to: NFTSGVFLFCYK*GLKRIVHYLTI
Trigger: AATGGTGAGATAATGGACGATTCTCTTAAGACCTCACTTATAACAGAAGAGGAAGACTCCACTAGTGAAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR CAA 90 bp TCTTCAAATTTTCCTAGGCCTTTGTTATGGCAACACAATATATACTTAACAGGCGACATAGTAGCAACATaGTCTGAACTCCCAAGATGT +
Preference number: 3 (lower is better)
Translates to: SSNFPRPLLWQHNIYLTGDIVAT*SELPRC
Trigger: ACATCTTGGGAGTTCAGACAATGTTGCTACTATGTC...GCCTGTTAAGTATATATTGTGTTGCCATAACAAAGGCCTAGGAAAATTTGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR CAA 90 bp CAAATAAGTTCACAAAGGACTATGTGTAATGTGACTGGACATTCAACAACTAGAGACATAGTAGCAACATaGTCTGAACTCCCAAGATGT +
Preference number: 3 (lower is better)
Translates to: QISSQRTMCNVTGHSTTRDIVAT*SELPRC
Trigger: ACATCTTGGGAGTTCAGACAATGTTGCTACTATGTC...TCTAGTTGTTGAATGTCCAGTCACATTACACATAGTCCTTTGTGAACTTATTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR-3UTR CAA 90 bp CAAATAAGTTCACAAAGGACTATGTGTAATGTGACTGGACATTCAACAACTAGAGATGTGCTTTCTTTCTaGGAAGTAGGGACAATTTCT +
Preference number: 3 (lower is better)
Translates to: QISSQRTMCNVTGHSTTRDVLSF*EVGTIS
Trigger: AGAAATTGTCCCTACTTCCAAGAAAGAAAGCACATC...TCTAGTTGTTGAATGTCCAGTCACATTACACATAGTCCTTTGTGAACTTATTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CCA 90 bp CCTTTGGCCTTTCTTCTTAAATTCCGCCTGTCTACCACAGGCACTTCCACTTCTCGCCCCGGGAGCCGCTaGAAGAGCCCGGGAAAGGAG +
Preference number: 4 (lower is better)
Translates to: PLAFLLKFRLSTTGTSTSRPGSR*KSPGKE
Trigger: CTCCTTTCCCGGGCTCTTCCAGCGGCTCCCGGGGCG...AGAAGTGGAAGTGCCTGTGGTAGACAGGCGGAATTTAAGAAGAAAGGCCAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510609.5
CDS-3UTR CCA 90 bp TCACCATCTTGCTTCTCTTGCTGTGGCTGGGTTTCCAGTGCTGGCCGTGCATCTTTCTCTTGCTGTGGCTaGGTTTCCAGTGCTGGCCGT +
Preference number: 4 (lower is better)
Translates to: SPSCFSCCGWVSSAGRASFSCCG*VSSAGR
Trigger: ACGGCCAGCACTGGAAACCCAGCCACAGCAAGAGAA...AGATGCACGGCCAGCACTGGAAACCCAGCCACAGCAAGAGAAGCAAGATGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CCA 90 bp TCACCATCTTGCTTCTCTTGCTGTGGCTGGGTTTCCAGTGCTGGCCGTGCATCTACGTGGGGTCTTATCTaGTGCATCTACCTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: SPSCFSCCGWVSSAGRASTWGLI*CIYLRG
Trigger: CCCCCTGAGGTAGATGCACCAGATAAGACCCCACGT...AGATGCACGGCCAGCACTGGAAACCCAGCCACAGCAAGAGAAGCAAGATGGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR GCA 90 bp AGGAGACAAATTCTCAGAGACCGGTTCTTCGGAAAATTCAGCTATCACAGAGTTAATGGAGCCGGCGGCTaGTCGCTGGCGACCTCCGGC +
Preference number: 4 (lower is better)
Translates to: RRQILRDRFFGKFSYHRVNGAGG*SLATSG
Trigger: GCCGGAGGTCGCCAGCGAGCAGCCGCCGGCTCCATT...AACTCTGTGATAGCTGAATTTTCCGAAGAACCGGTCTCTGAGAATTTGTCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510609.5
CDS-3UTR TCA 90 bp TCACCATCTTGCTTCTCTTGCTGTGGCTGGGTTTCCAGTGCTGGCCGTGCATCTTGCCACAGCTGTCAGTaGATCTTCAGGTGCAAAGAG +
Preference number: 4 (lower is better)
Translates to: SPSCFSCCGWVSSAGRASCHSCQ*IFRCKE
Trigger: CTCTTTGCACCTGAAGATTCACTGACAGCTGTGGCA...AGATGCACGGCCAGCACTGGAAACCCAGCCACAGCAAGAGAAGCAAGATGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp TCACCATCTTGCTTCTCTTGCTGTGGCTGGGTTTCCAGTGCTGGCCGTGCATCTGACTGCTCCTCTGACTaGTTCTTCTGTCCTGCATTC +
Preference number: 4 (lower is better)
Translates to: SPSCFSCCGWVSSAGRASDCSSD*FFCPAF
Trigger: GAATGCAGGACAGAAGAATCAGTCAGAGGAGCAGTC...AGATGCACGGCCAGCACTGGAAACCCAGCCACAGCAAGAGAAGCAAGATGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR GCA 90 bp GGAAAACCACCATCAGATCGTTCTTCATTTGACATAGTAGCAACATTGTCTGAACGCACAGCTCGCGGCTaGCAGGGCGAGTGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: GKPPSDRSSFDIVATLSERTARG*QGECGC
Trigger: GCAGCCGCACTCGCCCTGGCAGCCGCGAGCTGTGCG...TTCAGACAATGTTGCTACTATGTCAAATGAAGAACGATCTGATGGTGGTTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510609.5
CDS-3UTR CCA 90 bp TGCTCTGGTGACTGGTATTCGCTGGTACCAGTGTCCAACACCTTCAACTTCCCAGCAGTAGATGTTTCCTaGGGCTCAGATACCCCCTCC +
Preference number: 4 (lower is better)
Translates to: CSGDWYSLVPVSNTFNFPAVDVS*GSDTPS
Trigger: GGAGGGGGTATCTGAGCCCCAGGAAACATCTACTGC...TGGGAAGTTGAAGGTGTTGGACACTGGTACCAGCGAATACCAGTCACCAGAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp TCACCATCTTGCTTCTCTTGCTGTGGCTGGGTTTCCAGTGCTGGCCGTGCATCTGCCGATTGTGTAAACTaGTCCAGTTGCTCGGAAGAT +
Preference number: 4 (lower is better)
Translates to: SPSCFSCCGWVSSAGRASADCVN*SSCSED
Trigger: ATCTTCCGAGCAACTGGATCAGTTTACACAATCGGC...AGATGCACGGCCAGCACTGGAAACCCAGCCACAGCAAGAGAAGCAAGATGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp TCACCATCTTGCTTCTCTTGCTGTGGCTGGGTTTCCAGTGCTGGCCGTGCATCTAGCCTCCAATATGATTaGAGCCCTTGTAACCACAGC +
Preference number: 4 (lower is better)
Translates to: SPSCFSCCGWVSSAGRASSLQYD*SPCNHS
Trigger: GCTGTGGTTACAAGGGCTTCAATCATATTGGAGGCT...AGATGCACGGCCAGCACTGGAAACCCAGCCACAGCAAGAGAAGCAAGATGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CCA 90 bp TGCTCTGGTGACTGGTATTCGCTGGTACCAGTGTCCAACACCTTCAACTTCCCACTGGGTTTCCAGTGCTaGCCGTGCATCTCTATCACT +
Preference number: 4 (lower is better)
Translates to: CSGDWYSLVPVSNTFNFPLGFQC*PCISIT
Trigger: AGTGATAGAGATGCACGGCCAGCACTGGAAACCCAG...TGGGAAGTTGAAGGTGTTGGACACTGGTACCAGCGAATACCAGTCACCAGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR GCA 90 bp TACCGCAAGCCAAGCGCATCTTCTGTAAAGGAATCAACAAAGTCCTCCAGCATGTGGCTGGGTTTCCAGTaGTGGCCGTGCATCTCTATC +
Preference number: 4 (lower is better)
Translates to: YRKPSASSVKESTKSSSMWLGFQ*WPCISI
Trigger: GATAGAGATGCACGGCCAGCACTGGAAACCCAGCCA...CATGCTGGAGGACTTTGTTGATTCCTTTACAGAAGATGCGCTTGGCTTGCGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR GCA 90 bp TGCTCTGGTGACTGGTATTCGCTGGTACCAGTGTCCAACACCTTCAACTTCCCATGGGGTCTTATCTGGTaGATCTACCTCAGGGGGTTT +
Preference number: 4 (lower is better)
Translates to: CSGDWYSLVPVSNTFNFPWGLIW*IYLRGF
Trigger: AAACCCCCTGAGGTAGATGCACCAGATAAGACCCCA...TGGGAAGTTGAAGGTGTTGGACACTGGTACCAGCGAATACCAGTCACCAGAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CCA 90 bp TCACCATCTTGCTTCTCTTGCTGTGGCTGGGTTTCCAGTGCTGGCCGTGCATCTATAGGTCTAACATTGTaGGGTGCACCTCCAAACCTA +
Preference number: 4 (lower is better)
Translates to: SPSCFSCCGWVSSAGRASIGLTL*GAPPNL
Trigger: TAGGTTTGGAGGTGCACCCCACAATGTTAGACCTAT...AGATGCACGGCCAGCACTGGAAACCCAGCCACAGCAAGAGAAGCAAGATGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp TCACCATCTTGCTTCTCTTGCTGTGGCTGGGTTTCCAGTGCTGGCCGTGCATCTAGTAGCAACATTGTCTaGACTCCCAAGATGTGCTTT +
Preference number: 4 (lower is better)
Translates to: SPSCFSCCGWVSSAGRASSSNIV*TPKMCF
Trigger: AAAGCACATCTTGGGAGTTCAGACAATGTTGCTACT...AGATGCACGGCCAGCACTGGAAACCCAGCCACAGCAAGAGAAGCAAGATGGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp TGCTCTGGTGACTGGTATTCGCTGGTACCAGTGTCCAACACCTTCAACTTCCCACTGTCCTGCATTCTGTaGAAATGGCACGTCTTCAAG +
Preference number: 4 (lower is better)
Translates to: CSGDWYSLVPVSNTFNFPLSCIL*KWHVFK
Trigger: CTTGAAGACGTGCCATTTTCACAGAATGCAGGACAG...TGGGAAGTTGAAGGTGTTGGACACTGGTACCAGCGAATACCAGTCACCAGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp TCTTCAAATTTTCCTAGGCCTTTGTTATGGCAACACAATATATACTTAACAGGCGCGGAGCCGCGCGAATaGATGGAGCCGGCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SSNFPRPLLWQHNIYLTGAEPRE*MEPAAA
Trigger: AGCAGCCGCCGGCTCCATTCATTCGCGCGGCTCCGC...GCCTGTTAAGTATATATTGTGTTGCCATAACAAAGGCCTAGGAAAATTTGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510609.5
CDS-3UTR GCA 90 bp TCACCATCTTGCTTCTCTTGCTGTGGCTGGGTTTCCAGTGCTGGCCGTGCATCTCATGACCTTCGGAAGTaGTTGCAAAGGCATCTTTTA +
Preference number: 4 (lower is better)
Translates to: SPSCFSCCGWVSSAGRASHDLRK*LQRHLL
Trigger: TAAAAGATGCCTTTGCAAGCACTTCCGAAGGTCATG...AGATGCACGGCCAGCACTGGAAACCCAGCCACAGCAAGAGAAGCAAGATGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR GCA 90 bp TGCTCTGGTGACTGGTATTCGCTGGTACCAGTGTCCAACACCTTCAACTTCCCATCCTTTTCACCATCTTaGTTCTCTTGCTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: CSGDWYSLVPVSNTFNFPSFSPS*FSCCGW
Trigger: CCAGCCACAGCAAGAGAAGCAAGATGGTGAAAAGGA...TGGGAAGTTGAAGGTGTTGGACACTGGTACCAGCGAATACCAGTCACCAGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR GCA 90 bp TCACCATCTTGCTTCTCTTGCTGTGGCTGGGTTTCCAGTGCTGGCCGTGCATCTCTATTTCCTCTGAGCTaGTATCCACAGCTTTTTCTG +
Preference number: 4 (lower is better)
Translates to: SPSCFSCCGWVSSAGRASLFPLS*YPQLFL
Trigger: CAGAAAAAGCTGTGGATAGCAGCTCAGAGGAAATAG...AGATGCACGGCCAGCACTGGAAACCCAGCCACAGCAAGAGAAGCAAGATGGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CCA 90 bp ATTAGAACAATACAGGGAAAATTAGCATGGCCCCTGTGCAAGGATGACACAAATGTTCGCATAGCCCGGTaGAGTTCTCCAGCCCCGCGT +
Preference number: 4 (lower is better)
Translates to: IRTIQGKLAWPLCKDDTNVRIAR*SSPAPR
Trigger: ACGCGGGGCTGGAGAACTCCACCGGGCTATGCGAAC...ATTTGTGTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTGTATTGTTCTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389156.9
ENST00000510496.5
CDS-3UTR CCA 90 bp TCACCATCTTGCTTCTCTTGCTGTGGCTGGGTTTCCAGTGCTGGCCGTGCATCTGCTGTAAGTGAAGTCTaGGAGGTCTTTTCATCTTCA +
Preference number: 4 (lower is better)
Translates to: SPSCFSCCGWVSSAGRASAVSEV*EVFSSS
Trigger: TGAAGATGAAAAGACCTCCCAGACTTCACTTACAGC...AGATGCACGGCCAGCACTGGAAACCCAGCCACAGCAAGAGAAGCAAGATGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CCA 90 bp ATATACTTAACAGGCCAGCTTGCAACCAGTACTCAGTACAAATCAAAGGATGATAGCCGCGCGAATGAATaGAGCCGGCGGCTGCTCGCT +
Preference number: 4 (lower is better)
Translates to: IYLTGQLATSTQYKSKDDSRANE*SRRLLA
Trigger: AGCGAGCAGCCGCCGGCTCCATTCATTCGCGCGGCT...ATCATCCTTTGATTTGTACTGAGTACTGGTTGCAAGCTGGCCTGTTAAGTATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510609.5
CDS-3UTR TCA 90 bp ATTAGAACAATACAGGGAAAATTAGCATGGCCCCTGTGCAAGGATGACACAAATCCGCGTAGGCCCTCCTaGAATTTACCCAGAGTGGGC +
Preference number: 4 (lower is better)
Translates to: IRTIQGKLAWPLCKDDTNPRRPS*NLPRVG
Trigger: GCCCACTCTGGGTAAATTTCAGGAGGGCCTACGCGG...ATTTGTGTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTGTATTGTTCTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389156.9
ENST00000510496.5
CDS-3UTR TCA 90 bp TGCTCTGGTGACTGGTATTCGCTGGTACCAGTGTCCAACACCTTCAACTTCCCAAAGTCCTCCAGCATGTaGAGCCCAAAATCTTTACCT +
Preference number: 4 (lower is better)
Translates to: CSGDWYSLVPVSNTFNFPKSSSM*SPKSLP
Trigger: AGGTAAAGATTTTGGGCTTCACATGCTGGAGGACTT...TGGGAAGTTGAAGGTGTTGGACACTGGTACCAGCGAATACCAGTCACCAGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR GCA 90 bp TGCTCTGGTGACTGGTATTCGCTGGTACCAGTGTCCAACACCTTCAACTTCCCACTTAACAGGCCAGCTTaGAACCAGTACTCAGTACAA +
Preference number: 4 (lower is better)
Translates to: CSGDWYSLVPVSNTFNFPLNRPA*NQYSVQ
Trigger: TTGTACTGAGTACTGGTTGCAAGCTGGCCTGTTAAG...TGGGAAGTTGAAGGTGTTGGACACTGGTACCAGCGAATACCAGTCACCAGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CCA 90 bp ATATACTTAACAGGCCAGCTTGCAACCAGTACTCAGTACAAATCAAAGGATGATGTTCGCATAGCCCGGTaGAGTTCTCCAGCCCCGCGT +
Preference number: 4 (lower is better)
Translates to: IYLTGQLATSTQYKSKDDVRIAR*SSPAPR
Trigger: ACGCGGGGCTGGAGAACTCCACCGGGCTATGCGAAC...ATCATCCTTTGATTTGTACTGAGTACTGGTTGCAAGCTGGCCTGTTAAGTATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389156.9
ENST00000510496.5
CDS-3UTR CCA 90 bp TCACCATCTTGCTTCTCTTGCTGTGGCTGGGTTTCCAGTGCTGGCCGTGCATCTAGATTCTACCACCAGTaGAACAAGATTTGTAGAGTC +
Preference number: 4 (lower is better)
Translates to: SPSCFSCCGWVSSAGRASRFYHQ*NKICRV
Trigger: GACTCTACAAATCTTGTTCCACTGGTGGTAGAATCT...AGATGCACGGCCAGCACTGGAAACCCAGCCACAGCAAGAGAAGCAAGATGGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp TGCTCTGGTGACTGGTATTCGCTGGTACCAGTGTCCAACACCTTCAACTTCCCAACTAGACTAGCCGGTTaGAATCACATTTTCAGTCCT +
Preference number: 4 (lower is better)
Translates to: CSGDWYSLVPVSNTFNFPTRLAG*NHIFSP
Trigger: AGGACTGAAAATGTGATTTCAACCGGCTAGTCTAGT...TGGGAAGTTGAAGGTGTTGGACACTGGTACCAGCGAATACCAGTCACCAGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR GCA 90 bp TGCTCTGGTGACTGGTATTCGCTGGTACCAGTGTCCAACACCTTCAACTTCCCAGTATTCTGGAACAGATaGAGGACCATATTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: CSGDWYSLVPVSNTFNFPVFWNR*RTIFSR
Trigger: TCTGGAGAATATGGTCCTGCATCTGTTCCAGAATAC...TGGGAAGTTGAAGGTGTTGGACACTGGTACCAGCGAATACCAGTCACCAGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR GCA 90 bp TACCGCAAGCCAAGCGCATCTTCTGTAAAGGAATCAACAAAGTCCTCCAGCATGTCCTTTTCACCATCTTaGTTCTCTTGCTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: YRKPSASSVKESTKSSSMSFSPS*FSCCGW
Trigger: CCAGCCACAGCAAGAGAAGCAAGATGGTGAAAAGGA...CATGCTGGAGGACTTTGTTGATTCCTTTACAGAAGATGCGCTTGGCTTGCGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR GCA 90 bp TGCTCTGGTGACTGGTATTCGCTGGTACCAGTGTCCAACACCTTCAACTTCCCACTATTTCCTCTGAGCTaGTATCCACAGCTTTTTCTG +
Preference number: 4 (lower is better)
Translates to: CSGDWYSLVPVSNTFNFPLFPLS*YPQLFL
Trigger: CAGAAAAAGCTGTGGATAGCAGCTCAGAGGAAATAG...TGGGAAGTTGAAGGTGTTGGACACTGGTACCAGCGAATACCAGTCACCAGAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR GCA 90 bp TCACCATCTTGCTTCTCTTGCTGTGGCTGGGTTTCCAGTGCTGGCCGTGCATCTTTGTCCTGTGCCCCATaGTGTTTATTAATTACCATA +
Preference number: 4 (lower is better)
Translates to: SPSCFSCCGWVSSAGRASLSCAP*CLLITI
Trigger: TATGGTAATTAATAAACAGCATGGGGCACAGGACAA...AGATGCACGGCCAGCACTGGAAACCCAGCCACAGCAAGAGAAGCAAGATGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CCA 90 bp ATATACTTAACAGGCCAGCTTGCAACCAGTACTCAGTACAAATCAAAGGATGATGAAATTTACCCAGAGTaGGCGCGGCCATCCCGGCCT +
Preference number: 4 (lower is better)
Translates to: IYLTGQLATSTQYKSKDDEIYPE*ARPSRP
Trigger: AGGCCGGGATGGCCGCGCCCACTCTGGGTAAATTTC...ATCATCCTTTGATTTGTACTGAGTACTGGTTGCAAGCTGGCCTGTTAAGTATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389156.9
CDS-3UTR CCA 90 bp AGGAGACAAATTCTCAGAGACCGGTTCTTCGGAAAATTCAGCTATCACAGAGTTTTCTCTTGCTGTGGCTaGGTTTCCAGTGCTGGCCGT +
Preference number: 4 (lower is better)
Translates to: RRQILRDRFFGKFSYHRVFSCCG*VSSAGR
Trigger: ACGGCCAGCACTGGAAACCCAGCCACAGCAAGAGAA...AACTCTGTGATAGCTGAATTTTCCGAAGAACCGGTCTCTGAGAATTTGTCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp CCTTTGGCCTTTCTTCTTAAATTCCGCCTGTCTACCACAGGCACTTCCACTTCTTGCAAGCTGTATACATaGGAGAAGACAGTGGATACC +
Preference number: 4 (lower is better)
Translates to: PLAFLLKFRLSTTGTSTSCKLYT*EKTVDT
Trigger: GGTATCCACTGTCTTCTCTCATGTATACAGCTTGCA...AGAAGTGGAAGTGCCTGTGGTAGACAGGCGGAATTTAAGAAGAAAGGCCAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp CCTTTGGCCTTTCTTCTTAAATTCCGCCTGTCTACCACAGGCACTTCCACTTCTATCCATCAACATTTCTaGGTCAGGTATACGTGGGGT +
Preference number: 4 (lower is better)
Translates to: PLAFLLKFRLSTTGTSTSIHQHF*VRYTWG
Trigger: ACCCCACGTATACCTGACTCAGAAATGTTGATGGAT...AGAAGTGGAAGTGCCTGTGGTAGACAGGCGGAATTTAAGAAGAAAGGCCAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp TACCGCAAGCCAAGCGCATCTTCTGTAAAGGAATCAACAAAGTCCTCCAGCATGCACTTCTATTTCCTCTaGGCTGCTATCCACAGCTTT +
Preference number: 4 (lower is better)
Translates to: YRKPSASSVKESTKSSSMHFYFL*AAIHSF
Trigger: AAAGCTGTGGATAGCAGCTCAGAGGAAATAGAAGTG...CATGCTGGAGGACTTTGTTGATTCCTTTACAGAAGATGCGCTTGGCTTGCGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp TGCTCTGGTGACTGGTATTCGCTGGTACCAGTGTCCAACACCTTCAACTTCCCAGGAGCCTCATACTTCTaGAATATAGATGTTAACTGG +
Preference number: 4 (lower is better)
Translates to: CSGDWYSLVPVSNTFNFPGASYF*NIDVNW
Trigger: CCAGTTAACATCTATATTTCAGAAGTATGAGGCTCC...TGGGAAGTTGAAGGTGTTGGACACTGGTACCAGCGAATACCAGTCACCAGAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR GCA 90 bp ATTAGAACAATACAGGGAAAATTAGCATGGCCCCTGTGCAAGGATGACACAAATTGGCTGGGTTTCCAGTaGTGGCCGTGCATCTCTATC +
Preference number: 4 (lower is better)
Translates to: IRTIQGKLAWPLCKDDTNWLGFQ*WPCISI
Trigger: GATAGAGATGCACGGCCAGCACTGGAAACCCAGCCA...ATTTGTGTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTGTATTGTTCTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR GCA 90 bp TCACCATCTTGCTTCTCTTGCTGTGGCTGGGTTTCCAGTGCTGGCCGTGCATCTGAAATTTTTGTCCTGTaGCCCATGCTGTTTATTAAT +
Preference number: 4 (lower is better)
Translates to: SPSCFSCCGWVSSAGRASEIFVL*PMLFIN
Trigger: ATTAATAAACAGCATGGGGCACAGGACAAAAATTTC...AGATGCACGGCCAGCACTGGAAACCCAGCCACAGCAAGAGAAGCAAGATGGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CCA 90 bp TCACCATCTTGCTTCTCTTGCTGTGGCTGGGTTTCCAGTGCTGGCCGTGCATCTCACTTCGAGTATGAGTaGAAACAGATGTTTTATCAT +
Preference number: 4 (lower is better)
Translates to: SPSCFSCCGWVSSAGRASHFEYE*KQMFYH
Trigger: ATGATAAAACATCTGTTTCCACTCATACTCGAAGTG...AGATGCACGGCCAGCACTGGAAACCCAGCCACAGCAAGAGAAGCAAGATGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CCA 90 bp ATTAGAACAATACAGGGAAAATTAGCATGGCCCCTGTGCAAGGATGACACAAATTTCTCTTGCTGTGGCTaGGTTTCCAGTGCTGGCCGT +
Preference number: 4 (lower is better)
Translates to: IRTIQGKLAWPLCKDDTNFSCCG*VSSAGR
Trigger: ACGGCCAGCACTGGAAACCCAGCCACAGCAAGAGAA...ATTTGTGTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTGTATTGTTCTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CCA 90 bp ATTAGAACAATACAGGGAAAATTAGCATGGCCCCTGTGCAAGGATGACACAAATACGTGGGGTCTTATCTaGTGCATCTACCTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: IRTIQGKLAWPLCKDDTNTWGLI*CIYLRG
Trigger: CCCCCTGAGGTAGATGCACCAGATAAGACCCCACGT...ATTTGTGTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTGTATTGTTCTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CCA 90 bp GTCTTCAAGTTCAACCTCTATCAAAGAACTCTGAGGAAGAGCAGTAGATGTTTCGCAGTAGATGTTTCCTaGGGCTCAGATACCCCCTCC +
Preference number: 4 (lower is better)
Translates to: VFKFNLYQRTLRKSSRCFAVDVS*GSDTPS
Trigger: GGAGGGGGTATCTGAGCCCCAGGAAACATCTACTGC...GAAACATCTACTGCTCTTCCTCAGAGTTCTTTGATAGAGGTTGAACTTGAAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp TCTTCAAATTTTCCTAGGCCTTTGTTATGGCAACACAATATATACTTAACAGGCCCGCGTAGGCCCTCCTaGAATTTACCCAGAGTGGGC +
Preference number: 4 (lower is better)
Translates to: SSNFPRPLLWQHNIYLTGPRRPS*NLPRVG
Trigger: GCCCACTCTGGGTAAATTTCAGGAGGGCCTACGCGG...GCCTGTTAAGTATATATTGTGTTGCCATAACAAAGGCCTAGGAAAATTTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389156.9
ENST00000510496.5
CDS-3UTR TCA 90 bp AGGAGACAAATTCTCAGAGACCGGTTCTTCGGAAAATTCAGCTATCACAGAGTTTACCTCAGGGGGTTTTaGAGATTCTACCACCAGTGG +
Preference number: 4 (lower is better)
Translates to: RRQILRDRFFGKFSYHRVYLRGF*RFYHQW
Trigger: CCACTGGTGGTAGAATCTTCAAAACCCCCTGAGGTA...AACTCTGTGATAGCTGAATTTTCCGAAGAACCGGTCTCTGAGAATTTGTCTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp TGCTCTGGTGACTGGTATTCGCTGGTACCAGTGTCCAACACCTTCAACTTCCCACAAAATTTACTGACCTaGCATCAGCTTACTATAGAC +
Preference number: 4 (lower is better)
Translates to: CSGDWYSLVPVSNTFNFPQNLLT*HQLTID
Trigger: GTCTATAGTAAGCTGATGTCAGGTCAGTAAATTTTG...TGGGAAGTTGAAGGTGTTGGACACTGGTACCAGCGAATACCAGTCACCAGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp TACCGCAAGCCAAGCGCATCTTCTGTAAAGGAATCAACAAAGTCCTCCAGCATGCTAGTTCCTTGGAAATaGCGATCCAGGATGATACAA +
Preference number: 4 (lower is better)
Translates to: YRKPSASSVKESTKSSSMLVPWK*RSRMIQ
Trigger: TTGTATCATCCTGGATCGTCATTTCCAAGGAACTAG...CATGCTGGAGGACTTTGTTGATTCCTTTACAGAAGATGCGCTTGGCTTGCGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR GCA 90 bp CCTTTGGCCTTTCTTCTTAAATTCCGCCTGTCTACCACAGGCACTTCCACTTCTTTAGCAGGTCCTTTATaGCCTTTGGCCTTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: PLAFLLKFRLSTTGTSTSLAGPL*PLAFLL
Trigger: AAGAAGAAAGGCCAAAGGGCATAAAGGACCTGCTAA...AGAAGTGGAAGTGCCTGTGGTAGACAGGCGGAATTTAAGAAGAAAGGCCAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CCA 90 bp GTCTTCAAGTTCAACCTCTATCAAAGAACTCTGAGGAAGAGCAGTAGATGTTTCCATGAGAGAAGACAGTaGATACCGCAAGCCAAGCGC +
Preference number: 4 (lower is better)
Translates to: VFKFNLYQRTLRKSSRCFHERRQ*IPQAKR
Trigger: GCGCTTGGCTTGCGGTATCCACTGTCTTCTCTCATG...GAAACATCTACTGCTCTTCCTCAGAGTTCTTTGATAGAGGTTGAACTTGAAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CCA 90 bp ATTAGAACAATACAGGGAAAATTAGCATGGCCCCTGTGCAAGGATGACACAAATTTGCTTCTCTTGCTGTaGCTGGGTTTCCAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: IRTIQGKLAWPLCKDDTNLLLLL*LGFQCW
Trigger: CCAGCACTGGAAACCCAGCCACAGCAAGAGAAGCAA...ATTTGTGTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTGTATTGTTCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CCA 90 bp AGGAGACAAATTCTCAGAGACCGGTTCTTCGGAAAATTCAGCTATCACAGAGTTCAGGGAAAATTAGCATaGCCCCTGTGCAAGGATGAC +
Preference number: 4 (lower is better)
Translates to: RRQILRDRFFGKFSYHRVQGKLA*PLCKDD
Trigger: GTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTG...AACTCTGTGATAGCTGAATTTTCCGAAGAACCGGTCTCTGAGAATTTGTCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp ATTAGAACAATACAGGGAAAATTAGCATGGCCCCTGTGCAAGGATGACACAAATTACCTCAGGGGGTTTTaGAGATTCTACCACCAGTGG +
Preference number: 4 (lower is better)
Translates to: IRTIQGKLAWPLCKDDTNYLRGF*RFYHQW
Trigger: CCACTGGTGGTAGAATCTTCAAAACCCCCTGAGGTA...ATTTGTGTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTGTATTGTTCTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp TACCGCAAGCCAAGCGCATCTTCTGTAAAGGAATCAACAAAGTCCTCCAGCATGTCTATCAAAGAACTCTaGGGAAGAGCAGTAGATGTT +
Preference number: 4 (lower is better)
Translates to: YRKPSASSVKESTKSSSMSIKEL*GRAVDV
Trigger: AACATCTACTGCTCTTCCTCAGAGTTCTTTGATAGA...CATGCTGGAGGACTTTGTTGATTCCTTTACAGAAGATGCGCTTGGCTTGCGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp TGTCTGAACTCCCAAGATGTGCTTTCTTTCTTGGAAGTAGGGACAATTTCTCTTGCCCCTGTGCAAGGATaGCACAAATTCATGAAGCGT +
Preference number: 4 (lower is better)
Translates to: CLNSQDVLSFLEVGTISLAPVQG*HKFMKR
Trigger: ACGCTTCATGAATTTGTGTCATCCTTGCACAGGGGC...AAGAGAAATTGTCCCTACTTCCAAGAAAGAAAGCACATCTTGGGAGTTCAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp CCTTTGGCCTTTCTTCTTAAATTCCGCCTGTCTACCACAGGCACTTCCACTTCTGGACTATGTGTAATGTaGCTGGACATTCAACAACTA +
Preference number: 4 (lower is better)
Translates to: PLAFLLKFRLSTTGTSTSGLCVM*LDIQQL
Trigger: TAGTTGTTGAATGTCCAGTCACATTACACATAGTCC...AGAAGTGGAAGTGCCTGTGGTAGACAGGCGGAATTTAAGAAGAAAGGCCAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR GCA 90 bp ATTAGAACAATACAGGGAAAATTAGCATGGCCCCTGTGCAAGGATGACACAAATCCAAGAGTGCTCACCTaGTTAAGCCCCTCTCTTGAA +
Preference number: 4 (lower is better)
Translates to: IRTIQGKLAWPLCKDDTNPRVLT*LSPSLE
Trigger: TTCAAGAGAGGGGCTTAAGCAGGTGAGCACTCTTGG...ATTTGTGTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTGTATTGTTCTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389156.9
ENST00000510496.5
CDS-3UTR GCA 90 bp ATTAGAACAATACAGGGAAAATTAGCATGGCCCCTGTGCAAGGATGACACAAATTTCCAGTGCTGGCCGTaGATCTCTATCACTGCTTTC +
Preference number: 4 (lower is better)
Translates to: IRTIQGKLAWPLCKDDTNFQCWP*ISITAF
Trigger: GAAAGCAGTGATAGAGATGCACGGCCAGCACTGGAA...ATTTGTGTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTGTATTGTTCTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR GCA 90 bp GTCTTCAAGTTCAACCTCTATCAAAGAACTCTGAGGAAGAGCAGTAGATGTTTCTTCCAGTGCTGGCCGTaGATCTCTATCACTGCTTTC +
Preference number: 4 (lower is better)
Translates to: VFKFNLYQRTLRKSSRCFFQCWP*ISITAF
Trigger: GAAAGCAGTGATAGAGATGCACGGCCAGCACTGGAA...GAAACATCTACTGCTCTTCCTCAGAGTTCTTTGATAGAGGTTGAACTTGAAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR GCA 90 bp AGTATTAGGAGACAAATTCTCAGAGACCGGTTCTTCGGAAAATTCAGCTATCACTGGGGTCTTATCTGGTaGATCTACCTCAGGGGGTTT +
Preference number: 4 (lower is better)
Translates to: SIRRQILRDRFFGKFSYHWGLIW*IYLRGF
Trigger: AAACCCCCTGAGGTAGATGCACCAGATAAGACCCCA...GTGATAGCTGAATTTTCCGAAGAACCGGTCTCTGAGAATTTGTCTCCTAATACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR GCA 90 bp CCTTTGGCCTTTCTTCTTAAATTCCGCCTGTCTACCACAGGCACTTCCACTTCTATCCACAGCTTTTTCTaGCGATTGTGTAAACTGATC +
Preference number: 4 (lower is better)
Translates to: PLAFLLKFRLSTTGTSTSIHSFF*RLCKLI
Trigger: GATCAGTTTACACAATCGGCAGAAAAAGCTGTGGAT...AGAAGTGGAAGTGCCTGTGGTAGACAGGCGGAATTTAAGAAGAAAGGCCAAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR GCA 90 bp CCTTTGGCCTTTCTTCTTAAATTCCGCCTGTCTACCACAGGCACTTCCACTTCTAGATCTGTTTCAGTTTaGTGGTGTGACCAAACCTTA +
Preference number: 4 (lower is better)
Translates to: PLAFLLKFRLSTTGTSTSRSVSV*WCDQTL
Trigger: TAAGGTTTGGTCACACCAGCAAACTGAAACAGATCT...AGAAGTGGAAGTGCCTGTGGTAGACAGGCGGAATTTAAGAAGAAAGGCCAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CCA 90 bp ATATACTTAACAGGCCAGCTTGCAACCAGTACTCAGTACAAATCAAAGGATGATTTGCTTCTCTTGCTGTaGCTGGGTTTCCAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: IYLTGQLATSTQYKSKDDLLLLL*LGFQCW
Trigger: CCAGCACTGGAAACCCAGCCACAGCAAGAGAAGCAA...ATCATCCTTTGATTTGTACTGAGTACTGGTTGCAAGCTGGCCTGTTAAGTATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CCA 90 bp ATTAGAACAATACAGGGAAAATTAGCATGGCCCCTGTGCAAGGATGACACAAATCAGGGAAAATTAGCATaGCCCCTGTGCAAGGATGAC +
Preference number: 4 (lower is better)
Translates to: IRTIQGKLAWPLCKDDTNQGKLA*PLCKDD
Trigger: GTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTG...ATTTGTGTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTGTATTGTTCTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CCA 90 bp GTCTTCAAGTTCAACCTCTATCAAAGAACTCTGAGGAAGAGCAGTAGATGTTTCCAGGGAAAATTAGCATaGCCCCTGTGCAAGGATGAC +
Preference number: 4 (lower is better)
Translates to: VFKFNLYQRTLRKSSRCFQGKLA*PLCKDD
Trigger: GTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTG...GAAACATCTACTGCTCTTCCTCAGAGTTCTTTGATAGAGGTTGAACTTGAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CCA 90 bp TACCGCAAGCCAAGCGCATCTTCTGTAAAGGAATCAACAAAGTCCTCCAGCATGTCTGTTTCAGTTTGCTaGTGTGACCAAACCTTAGAA +
Preference number: 4 (lower is better)
Translates to: YRKPSASSVKESTKSSSMSVSVC*CDQTLE
Trigger: TTCTAAGGTTTGGTCACACCAGCAAACTGAAACAGA...CATGCTGGAGGACTTTGTTGATTCCTTTACAGAAGATGCGCTTGGCTTGCGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
3UTR CAA 72 bp CAACATTGTCTGAACTCCCAAGATGTGCTTTCTTTCTaGGAAGTAGGGACAATTTCTCTTCCATGTGCCCCT +
Preference number: 4 (lower is better)
Translates to: QHCLNSQDVLSF*EVGTISLPCAP
Trigger: AGGGGCACATGGAAGAGAAATTGTCCCTACTTCCAAGAAAGAAAGCACATCTTGGGAGTTCAGACAATGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp ATATACTTAACAGGCCAGCTTGCAACCAGTACTCAGTACAAATCAAAGGATGATTGCCACAGCTGTCAGTaGATCTTCAGGTGCAAAGAG +
Preference number: 4 (lower is better)
Translates to: IYLTGQLATSTQYKSKDDCHSCQ*IFRCKE
Trigger: CTCTTTGCACCTGAAGATTCACTGACAGCTGTGGCA...ATCATCCTTTGATTTGTACTGAGTACTGGTTGCAAGCTGGCCTGTTAAGTATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp ATTAGAACAATACAGGGAAAATTAGCATGGCCCCTGTGCAAGGATGACACAAATTTTGTAATGCTCTGGTaGCTGGTATTCGCTGGTACC +
Preference number: 4 (lower is better)
Translates to: IRTIQGKLAWPLCKDDTNFVMLW*LVFAGT
Trigger: GGTACCAGCGAATACCAGTCACCAGAGCATTACAAA...ATTTGTGTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTGTATTGTTCTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp GTCTTCAAGTTCAACCTCTATCAAAGAACTCTGAGGAAGAGCAGTAGATGTTTCTTTGTAATGCTCTGGTaGCTGGTATTCGCTGGTACC +
Preference number: 4 (lower is better)
Translates to: VFKFNLYQRTLRKSSRCFFVMLW*LVFAGT
Trigger: GGTACCAGCGAATACCAGTCACCAGAGCATTACAAA...GAAACATCTACTGCTCTTCCTCAGAGTTCTTTGATAGAGGTTGAACTTGAAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp CCTTTGGCCTTTCTTCTTAAATTCCGCCTGTCTACCACAGGCACTTCCACTTCTCTAAATTCAGAATCCTaGAACCGCTTTCCAATCTTT +
Preference number: 4 (lower is better)
Translates to: PLAFLLKFRLSTTGTSTSLNSES*NRFPIF
Trigger: AAAGATTGGAAAGCGGTTTCAGGATTCTGAATTTAG...AGAAGTGGAAGTGCCTGTGGTAGACAGGCGGAATTTAAGAAGAAAGGCCAAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp ATATACTTAACAGGCCAGCTTGCAACCAGTACTCAGTACAAATCAAAGGATGATTACCTCAGGGGGTTTTaGAGATTCTACCACCAGTGG +
Preference number: 4 (lower is better)
Translates to: IYLTGQLATSTQYKSKDDYLRGF*RFYHQW
Trigger: CCACTGGTGGTAGAATCTTCAAAACCCCCTGAGGTA...ATCATCCTTTGATTTGTACTGAGTACTGGTTGCAAGCTGGCCTGTTAAGTATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp GGAAAACCACCATCAGATCGTTCTTCATTTGACATAGTAGCAACATTGTCTGAATACCTCAGGGGGTTTTaGAGATTCTACCACCAGTGG +
Preference number: 4 (lower is better)
Translates to: GKPPSDRSSFDIVATLSEYLRGF*RFYHQW
Trigger: CCACTGGTGGTAGAATCTTCAAAACCCCCTGAGGTA...TTCAGACAATGTTGCTACTATGTCAAATGAAGAACGATCTGATGGTGGTTTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp AGGAGACAAATTCTCAGAGACCGGTTCTTCGGAAAATTCAGCTATCACAGAGTTATCCATCAACATTTCTaGGTCAGGTATACGTGGGGT +
Preference number: 4 (lower is better)
Translates to: RRQILRDRFFGKFSYHRVIHQHF*VRYTWG
Trigger: ACCCCACGTATACCTGACTCAGAAATGTTGATGGAT...AACTCTGTGATAGCTGAATTTTCCGAAGAACCGGTCTCTGAGAATTTGTCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp ATATACTTAACAGGCCAGCTTGCAACCAGTACTCAGTACAAATCAAAGGATGATGACTGCTCCTCTGACTaGTTCTTCTGTCCTGCATTC +
Preference number: 4 (lower is better)
Translates to: IYLTGQLATSTQYKSKDDDCSSD*FFCPAF
Trigger: GAATGCAGGACAGAAGAATCAGTCAGAGGAGCAGTC...ATCATCCTTTGATTTGTACTGAGTACTGGTTGCAAGCTGGCCTGTTAAGTATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp ATTAGAACAATACAGGGAAAATTAGCATGGCCCCTGTGCAAGGATGACACAAATGCCGATTGTGTAAACTaGTCCAGTTGCTCGGAAGAT +
Preference number: 4 (lower is better)
Translates to: IRTIQGKLAWPLCKDDTNADCVN*SSCSED
Trigger: ATCTTCCGAGCAACTGGATCAGTTTACACAATCGGC...ATTTGTGTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTGTATTGTTCTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp TGTCTGAACTCCCAAGATGTGCTTTCTTTCTTGGAAGTAGGGACAATTTCTCTTGCCGATTGTGTAAACTaGTCCAGTTGCTCGGAAGAT +
Preference number: 4 (lower is better)
Translates to: CLNSQDVLSFLEVGTISLADCVN*SSCSED
Trigger: ATCTTCCGAGCAACTGGATCAGTTTACACAATCGGC...AAGAGAAATTGTCCCTACTTCCAAGAAAGAAAGCACATCTTGGGAGTTCAGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp CCTTTGGCCTTTCTTCTTAAATTCCGCCTGTCTACCACAGGCACTTCCACTTCTCAAAATTTACTGACCTaGCATCAGCTTACTATAGAC +
Preference number: 4 (lower is better)
Translates to: PLAFLLKFRLSTTGTSTSQNLLT*HQLTID
Trigger: GTCTATAGTAAGCTGATGTCAGGTCAGTAAATTTTG...AGAAGTGGAAGTGCCTGTGGTAGACAGGCGGAATTTAAGAAGAAAGGCCAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp CCTTTGGCCTTTCTTCTTAAATTCCGCCTGTCTACCACAGGCACTTCCACTTCTCCAAACAAAATTTACTaGCCTGACATCAGCTTACTA +
Preference number: 4 (lower is better)
Translates to: PLAFLLKFRLSTTGTSTSPNKIY*PDISLL
Trigger: TAGTAAGCTGATGTCAGGTCAGTAAATTTTGTTTGG...AGAAGTGGAAGTGCCTGTGGTAGACAGGCGGAATTTAAGAAGAAAGGCCAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp TACCGCAAGCCAAGCGCATCTTCTGTAAAGGAATCAACAAAGTCCTCCAGCATGAGTACAGGCTCAATTTaGTGCAATCATAAACCTTCA +
Preference number: 4 (lower is better)
Translates to: YRKPSASSVKESTKSSSMSTGSI*CNHKPS
Trigger: TGAAGGTTTATGATTGCATCAAATTGAGCCTGTACT...CATGCTGGAGGACTTTGTTGATTCCTTTACAGAAGATGCGCTTGGCTTGCGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR GCA 90 bp ATATACTTAACAGGCCAGCTTGCAACCAGTACTCAGTACAAATCAAAGGATGATTTCCAGTGCTGGCCGTaGATCTCTATCACTGCTTTC +
Preference number: 4 (lower is better)
Translates to: IYLTGQLATSTQYKSKDDFQCWP*ISITAF
Trigger: GAAAGCAGTGATAGAGATGCACGGCCAGCACTGGAA...ATCATCCTTTGATTTGTACTGAGTACTGGTTGCAAGCTGGCCTGTTAAGTATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR GCA 90 bp GGAAAACCACCATCAGATCGTTCTTCATTTGACATAGTAGCAACATTGTCTGAATTCCAGTGCTGGCCGTaGATCTCTATCACTGCTTTC +
Preference number: 4 (lower is better)
Translates to: GKPPSDRSSFDIVATLSEFQCWP*ISITAF
Trigger: GAAAGCAGTGATAGAGATGCACGGCCAGCACTGGAA...TTCAGACAATGTTGCTACTATGTCAAATGAAGAACGATCTGATGGTGGTTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR GCA 90 bp TCTTCAAATTTTCCTAGGCCTTTGTTATGGCAACACAATATATACTTAACAGGCTGGCTGGGTTTCCAGTaGTGGCCGTGCATCTCTATC +
Preference number: 4 (lower is better)
Translates to: SSNFPRPLLWQHNIYLTGWLGFQ*WPCISI
Trigger: GATAGAGATGCACGGCCAGCACTGGAAACCCAGCCA...GCCTGTTAAGTATATATTGTGTTGCCATAACAAAGGCCTAGGAAAATTTGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR GCA 90 bp ATTAGAACAATACAGGGAAAATTAGCATGGCCCCTGTGCAAGGATGACACAAATTCCTTTTCACCATCTTaGTTCTCTTGCTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: IRTIQGKLAWPLCKDDTNSFSPS*FSCCGW
Trigger: CCAGCCACAGCAAGAGAAGCAAGATGGTGAAAAGGA...ATTTGTGTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTGTATTGTTCTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR GCA 90 bp ATATACTTAACAGGCCAGCTTGCAACCAGTACTCAGTACAAATCAAAGGATGATTGGGGTCTTATCTGGTaGATCTACCTCAGGGGGTTT +
Preference number: 4 (lower is better)
Translates to: IYLTGQLATSTQYKSKDDWGLIW*IYLRGF
Trigger: AAACCCCCTGAGGTAGATGCACCAGATAAGACCCCA...ATCATCCTTTGATTTGTACTGAGTACTGGTTGCAAGCTGGCCTGTTAAGTATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR GCA 90 bp TGTCTGAACTCCCAAGATGTGCTTTCTTTCTTGGAAGTAGGGACAATTTCTCTTTCTAACATTGTGGGGTaGACCTCCAAACCTACCCAA +
Preference number: 4 (lower is better)
Translates to: CLNSQDVLSFLEVGTISLSNIVG*TSKPTQ
Trigger: TTGGGTAGGTTTGGAGGTGCACCCCACAATGTTAGA...AAGAGAAATTGTCCCTACTTCCAAGAAAGAAAGCACATCTTGGGAGTTCAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR GCA 90 bp TCTTCAAATTTTCCTAGGCCTTTGTTATGGCAACACAATATATACTTAACAGGCCATATCCACAGGGAATaGCATCCTCTCAGACGCGCC +
Preference number: 4 (lower is better)
Translates to: SSNFPRPLLWQHNIYLTGHIHRE*HPLRRA
Trigger: GGCGCGTCTGAGAGGATGGCATTCCCTGTGGATATG...GCCTGTTAAGTATATATTGTGTTGCCATAACAAAGGCCTAGGAAAATTTGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510609.5
CDS-3UTR GCA 90 bp AGTATTAGGAGACAAATTCTCAGAGACCGGTTCTTCGGAAAATTCAGCTATCACGAAAAGAGGCACATATaGTTCCTGCTTAAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: SIRRQILRDRFFGKFSYHEKRHI*FLLKPL
Trigger: GAGGGGCTTAAGCAGGAAGCATATGTGCCTCTTTTC...GTGATAGCTGAATTTTCCGAAGAACCGGTCTCTGAGAATTTGTCTCCTAATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CCA 90 bp TCTTCAAATTTTCCTAGGCCTTTGTTATGGCAACACAATATATACTTAACAGGCTTCTCTTGCTGTGGCTaGGTTTCCAGTGCTGGCCGT +
Preference number: 4 (lower is better)
Translates to: SSNFPRPLLWQHNIYLTGFSCCG*VSSAGR
Trigger: ACGGCCAGCACTGGAAACCCAGCCACAGCAAGAGAA...GCCTGTTAAGTATATATTGTGTTGCCATAACAAAGGCCTAGGAAAATTTGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CCA 90 bp TCTTCAAATTTTCCTAGGCCTTTGTTATGGCAACACAATATATACTTAACAGGCACGTGGGGTCTTATCTaGTGCATCTACCTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: SSNFPRPLLWQHNIYLTGTWGLI*CIYLRG
Trigger: CCCCCTGAGGTAGATGCACCAGATAAGACCCCACGT...GCCTGTTAAGTATATATTGTGTTGCCATAACAAAGGCCTAGGAAAATTTGAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CCA 90 bp CAAATAAGTTCACAAAGGACTATGTGTAATGTGACTGGACATTCAACAACTAGAGCAGTAGATGTTTCCTaGGGCTCAGATACCCCCTCC +
Preference number: 4 (lower is better)
Translates to: QISSQRTMCNVTGHSTTRAVDVS*GSDTPS
Trigger: GGAGGGGGTATCTGAGCCCCAGGAAACATCTACTGC...TCTAGTTGTTGAATGTCCAGTCACATTACACATAGTCCTTTGTGAACTTATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp GTCTTCAAGTTCAACCTCTATCAAAGAACTCTGAGGAAGAGCAGTAGATGTTTCTGCAAGCTGTATACATaGGAGAAGACAGTGGATACC +
Preference number: 4 (lower is better)
Translates to: VFKFNLYQRTLRKSSRCFCKLYT*EKTVDT
Trigger: GGTATCCACTGTCTTCTCTCATGTATACAGCTTGCA...GAAACATCTACTGCTCTTCCTCAGAGTTCTTTGATAGAGGTTGAACTTGAAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp ATTAGAACAATACAGGGAAAATTAGCATGGCCCCTGTGCAAGGATGACACAAATATCCATCAACATTTCTaGGTCAGGTATACGTGGGGT +
Preference number: 4 (lower is better)
Translates to: IRTIQGKLAWPLCKDDTNIHQHF*VRYTWG
Trigger: ACCCCACGTATACCTGACTCAGAAATGTTGATGGAT...ATTTGTGTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTGTATTGTTCTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp ATTAGAACAATACAGGGAAAATTAGCATGGCCCCTGTGCAAGGATGACACAAATACCCTGGTCTTCCAATaGGGAAGTAGTATTAGGAGA +
Preference number: 4 (lower is better)
Translates to: IRTIQGKLAWPLCKDDTNTLVFQ*GSSIRR
Trigger: TCTCCTAATACTACTTCCTCATTGGAAGACCAGGGT...ATTTGTGTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTGTATTGTTCTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp AGTATTAGGAGACAAATTCTCAGAGACCGGTTCTTCGGAAAATTCAGCTATCACACCCTGGTCTTCCAATaGGGAAGTAGTATTAGGAGA +
Preference number: 4 (lower is better)
Translates to: SIRRQILRDRFFGKFSYHTLVFQ*GSSIRR
Trigger: TCTCCTAATACTACTTCCTCATTGGAAGACCAGGGT...GTGATAGCTGAATTTTCCGAAGAACCGGTCTCTGAGAATTTGTCTCCTAATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp ATATACTTAACAGGCCAGCTTGCAACCAGTACTCAGTACAAATCAAAGGATGATCTGTCCTGCATTCTGTaGAAATGGCACGTCTTCAAG +
Preference number: 4 (lower is better)
Translates to: IYLTGQLATSTQYKSKDDLSCIL*KWHVFK
Trigger: CTTGAAGACGTGCCATTTTCACAGAATGCAGGACAG...ATCATCCTTTGATTTGTACTGAGTACTGGTTGCAAGCTGGCCTGTTAAGTATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp ATTAGAACAATACAGGGAAAATTAGCATGGCCCCTGTGCAAGGATGACACAAATCACTTCTATTTCCTCTaGGCTGCTATCCACAGCTTT +
Preference number: 4 (lower is better)
Translates to: IRTIQGKLAWPLCKDDTNHFYFL*AAIHSF
Trigger: AAAGCTGTGGATAGCAGCTCAGAGGAAATAGAAGTG...ATTTGTGTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTGTATTGTTCTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp AGTATTAGGAGACAAATTCTCAGAGACCGGTTCTTCGGAAAATTCAGCTATCACCACTTCTATTTCCTCTaGGCTGCTATCCACAGCTTT +
Preference number: 4 (lower is better)
Translates to: SIRRQILRDRFFGKFSYHHFYFL*AAIHSF
Trigger: AAAGCTGTGGATAGCAGCTCAGAGGAAATAGAAGTG...GTGATAGCTGAATTTTCCGAAGAACCGGTCTCTGAGAATTTGTCTCCTAATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp ATATACTTAACAGGCCAGCTTGCAACCAGTACTCAGTACAAATCAAAGGATGATGGCAGGAAGATCTGTTaGTTGGAGAATCACTCCATG +
Preference number: 4 (lower is better)
Translates to: IYLTGQLATSTQYKSKDDGRKIC*LENHSM
Trigger: CATGGAGTGATTCTCCAATCAACAGATCTTCCTGCC...ATCATCCTTTGATTTGTACTGAGTACTGGTTGCAAGCTGGCCTGTTAAGTATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp GGAAAACCACCATCAGATCGTTCTTCATTTGACATAGTAGCAACATTGTCTGAAGGCAGGAAGATCTGTTaGTTGGAGAATCACTCCATG +
Preference number: 4 (lower is better)
Translates to: GKPPSDRSSFDIVATLSEGRKIC*LENHSM
Trigger: CATGGAGTGATTCTCCAATCAACAGATCTTCCTGCC...TTCAGACAATGTTGCTACTATGTCAAATGAAGAACGATCTGATGGTGGTTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp ATTAGAACAATACAGGGAAAATTAGCATGGCCCCTGTGCAAGGATGACACAAATTCACACATCAAGAGTTaGGCCAGTGAGCTCAATCTT +
Preference number: 4 (lower is better)
Translates to: IRTIQGKLAWPLCKDDTNSHIKS*ASELNL
Trigger: AAGATTGAGCTCACTGGCTCAACTCTTGATGTGTGA...ATTTGTGTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTGTATTGTTCTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp ATTAGAACAATACAGGGAAAATTAGCATGGCCCCTGTGCAAGGATGACACAAATAGCTGTAGGCTTAACTaGATAAAACCCAATGGCCTC +
Preference number: 4 (lower is better)
Translates to: IRTIQGKLAWPLCKDDTNSCRLN*IKPNGL
Trigger: GAGGCCATTGGGTTTTATTCAGTTAAGCCTACAGCT...ATTTGTGTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTGTATTGTTCTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000510496.5
CDS-3UTR GCA 90 bp ATTAGAACAATACAGGGAAAATTAGCATGGCCCCTGTGCAAGGATGACACAAATCTACTGCCACTTAGGTaGATGCAAGTTAGAATCGTG +
Preference number: 4 (lower is better)
Translates to: IRTIQGKLAWPLCKDDTNLLPLR*MQVRIV
Trigger: CACGATTCTAACTTGCATGCACCTAAGTGGCAGTAG...ATTTGTGTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTGTATTGTTCTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389156.9
CDS-3UTR GCA 90 bp ATATACTTAACAGGCCAGCTTGCAACCAGTACTCAGTACAAATCAAAGGATGATCATATCCACAGGGAATaGCATCCTCTTCGCAGGATT +
Preference number: 4 (lower is better)
Translates to: IYLTGQLATSTQYKSKDDHIHRE*HPLRRI
Trigger: AATCCTGCGAAGAGGATGGCATTCCCTGTGGATATG...ATCATCCTTTGATTTGTACTGAGTACTGGTTGCAAGCTGGCCTGTTAAGTATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389156.9
ENST00000510496.5
CDS-3UTR GCA 90 bp ATATACTTAACAGGCCAGCTTGCAACCAGTACTCAGTACAAATCAAAGGATGATTCTAACATTGTGGGGTaGACCTCCAAACCTACCCAA +
Preference number: 4 (lower is better)
Translates to: IYLTGQLATSTQYKSKDDSNIVG*TSKPTQ
Trigger: TTGGGTAGGTTTGGAGGTGCACCCCACAATGTTAGA...ATCATCCTTTGATTTGTACTGAGTACTGGTTGCAAGCTGGCCTGTTAAGTATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR GCA 90 bp ATATACTTAACAGGCCAGCTTGCAACCAGTACTCAGTACAAATCAAAGGATGATGAAAAGAGGCACATATaGTTCCTGCTTAAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: IYLTGQLATSTQYKSKDDEKRHI*FLLKPL
Trigger: GAGGGGCTTAAGCAGGAAGCATATGTGCCTCTTTTC...ATCATCCTTTGATTTGTACTGAGTACTGGTTGCAAGCTGGCCTGTTAAGTATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CCA 90 bp CAAATAAGTTCACAAAGGACTATGTGTAATGTGACTGGACATTCAACAACTAGACATGAGAGAAGACAGTaGATACCGCAAGCCAAGCGC +
Preference number: 4 (lower is better)
Translates to: QISSQRTMCNVTGHSTTRHERRQ*IPQAKR
Trigger: GCGCTTGGCTTGCGGTATCCACTGTCTTCTCTCATG...TCTAGTTGTTGAATGTCCAGTCACATTACACATAGTCCTTTGTGAACTTATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389156.9
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CCA 90 bp TCTTCAAATTTTCCTAGGCCTTTGTTATGGCAACACAATATATACTTAACAGGCCATGAGAGAAGACAGTaGATACCGCAAGCCAAGCGC +
Preference number: 4 (lower is better)
Translates to: SSNFPRPLLWQHNIYLTGHERRQ*IPQAKR
Trigger: GCGCTTGGCTTGCGGTATCCACTGTCTTCTCTCATG...GCCTGTTAAGTATATATTGTGTTGCCATAACAAAGGCCTAGGAAAATTTGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389156.9
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CCA 90 bp ATTAGAACAATACAGGGAAAATTAGCATGGCCCCTGTGCAAGGATGACACAAATTCCCAAAGGAGTTCATaGTCTCCTGGATACTTCTCA +
Preference number: 4 (lower is better)
Translates to: IRTIQGKLAWPLCKDDTNSQRSS*SPGYFS
Trigger: TGAGAAGTATCCAGGAGACCATGAACTCCTTTGGGA...ATTTGTGTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTGTATTGTTCTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CCA 90 bp AGGAGACAAATTCTCAGAGACCGGTTCTTCGGAAAATTCAGCTATCACAGAGTTTCTTGCTTCGTATTCTaGAACAGATGCAGGACCATA +
Preference number: 4 (lower is better)
Translates to: RRQILRDRFFGKFSYHRVSCFVF*NRCRTI
Trigger: TATGGTCCTGCATCTGTTCCAGAATACGAAGCAAGA...AACTCTGTGATAGCTGAATTTTCCGAAGAACCGGTCTCTGAGAATTTGTCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CCA 90 bp CAAATAAGTTCACAAAGGACTATGTGTAATGTGACTGGACATTCAACAACTAGACTGGGTTTCCAGTGCTaGCCGTGCATCTCTATCACT +
Preference number: 4 (lower is better)
Translates to: QISSQRTMCNVTGHSTTRLGFQC*PCISIT
Trigger: AGTGATAGAGATGCACGGCCAGCACTGGAAACCCAG...TCTAGTTGTTGAATGTCCAGTCACATTACACATAGTCCTTTGTGAACTTATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CCA 90 bp TCTTCAAATTTTCCTAGGCCTTTGTTATGGCAACACAATATATACTTAACAGGCTTGCTTCTCTTGCTGTaGCTGGGTTTCCAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: SSNFPRPLLWQHNIYLTGLLLLL*LGFQCW
Trigger: CCAGCACTGGAAACCCAGCCACAGCAAGAGAAGCAA...GCCTGTTAAGTATATATTGTGTTGCCATAACAAAGGCCTAGGAAAATTTGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CCA 90 bp GTCTTCAAGTTCAACCTCTATCAAAGAACTCTGAGGAAGAGCAGTAGATGTTTCATAGGTCTAACATTGTaGGGTGCACCTCCAAACCTA +
Preference number: 4 (lower is better)
Translates to: VFKFNLYQRTLRKSSRCFIGLTL*GAPPNL
Trigger: TAGGTTTGGAGGTGCACCCCACAATGTTAGACCTAT...GAAACATCTACTGCTCTTCCTCAGAGTTCTTTGATAGAGGTTGAACTTGAAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp TCTTCAAATTTTCCTAGGCCTTTGTTATGGCAACACAATATATACTTAACAGGCTGCCACAGCTGTCAGTaGATCTTCAGGTGCAAAGAG +
Preference number: 4 (lower is better)
Translates to: SSNFPRPLLWQHNIYLTGCHSCQ*IFRCKE
Trigger: CTCTTTGCACCTGAAGATTCACTGACAGCTGTGGCA...GCCTGTTAAGTATATATTGTGTTGCCATAACAAAGGCCTAGGAAAATTTGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp ATATACTTAACAGGCCAGCTTGCAACCAGTACTCAGTACAAATCAAAGGATGATAAGTCCTCCAGCATGTaGAGCCCAAAATCTTTACCT +
Preference number: 4 (lower is better)
Translates to: IYLTGQLATSTQYKSKDDKSSSM*SPKSLP
Trigger: AGGTAAAGATTTTGGGCTTCACATGCTGGAGGACTT...ATCATCCTTTGATTTGTACTGAGTACTGGTTGCAAGCTGGCCTGTTAAGTATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389156.9
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp ATTAGAACAATACAGGGAAAATTAGCATGGCCCCTGTGCAAGGATGACACAAATTGCATCTCACTAGACTaGTTGTCTTCAGTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: IRTIQGKLAWPLCKDDTNCISLD*LSSVLA
Trigger: AGCAAGAACTGAAGACAATCAGTCTAGTGAGATGCA...ATTTGTGTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTGTATTGTTCTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp GTCTTCAAGTTCAACCTCTATCAAAGAACTCTGAGGAAGAGCAGTAGATGTTTCTGCATCTCACTAGACTaGTTGTCTTCAGTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: VFKFNLYQRTLRKSSRCFCISLD*LSSVLA
Trigger: AGCAAGAACTGAAGACAATCAGTCTAGTGAGATGCA...GAAACATCTACTGCTCTTCCTCAGAGTTCTTTGATAGAGGTTGAACTTGAAGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp TGTCTGAACTCCCAAGATGTGCTTTCTTTCTTGGAAGTAGGGACAATTTCTCTTACAGATGTTTTATCATaGCCTTCGGAAGTGCTTGCA +
Preference number: 4 (lower is better)
Translates to: CLNSQDVLSFLEVGTISLTDVLS*PSEVLA
Trigger: TGCAAGCACTTCCGAAGGTCATGATAAAACATCTGT...AAGAGAAATTGTCCCTACTTCCAAGAAAGAAAGCACATCTTGGGAGTTCAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp ATTAGAACAATACAGGGAAAATTAGCATGGCCCCTGTGCAAGGATGACACAAATAGTAGCAACATTGTCTaGACTCCCAAGATGTGCTTT +
Preference number: 4 (lower is better)
Translates to: IRTIQGKLAWPLCKDDTNSSNIV*TPKMCF
Trigger: AAAGCACATCTTGGGAGTTCAGACAATGTTGCTACT...ATTTGTGTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTGTATTGTTCTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp ATATACTTAACAGGCCAGCTTGCAACCAGTACTCAGTACAAATCAAAGGATGATACCCTGGTCTTCCAATaGGGAAGTAGTATTAGGAGA +
Preference number: 4 (lower is better)
Translates to: IYLTGQLATSTQYKSKDDTLVFQ*GSSIRR
Trigger: TCTCCTAATACTACTTCCTCATTGGAAGACCAGGGT...ATCATCCTTTGATTTGTACTGAGTACTGGTTGCAAGCTGGCCTGTTAAGTATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp AGGAGACAAATTCTCAGAGACCGGTTCTTCGGAAAATTCAGCTATCACAGAGTTTCTATCAAAGAACTCTaGGGAAGAGCAGTAGATGTT +
Preference number: 4 (lower is better)
Translates to: RRQILRDRFFGKFSYHRVSIKEL*GRAVDV
Trigger: AACATCTACTGCTCTTCCTCAGAGTTCTTTGATAGA...AACTCTGTGATAGCTGAATTTTCCGAAGAACCGGTCTCTGAGAATTTGTCTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp TCTTCAAATTTTCCTAGGCCTTTGTTATGGCAACACAATATATACTTAACAGGCGACTGCTCCTCTGACTaGTTCTTCTGTCCTGCATTC +
Preference number: 4 (lower is better)
Translates to: SSNFPRPLLWQHNIYLTGDCSSD*FFCPAF
Trigger: GAATGCAGGACAGAAGAATCAGTCAGAGGAGCAGTC...GCCTGTTAAGTATATATTGTGTTGCCATAACAAAGGCCTAGGAAAATTTGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp CAAATAAGTTCACAAAGGACTATGTGTAATGTGACTGGACATTCAACAACTAGAGCCCCTGTGCAAGGATaGCACAAATTCATGAAGCGT +
Preference number: 4 (lower is better)
Translates to: QISSQRTMCNVTGHSTTRAPVQG*HKFMKR
Trigger: ACGCTTCATGAATTTGTGTCATCCTTGCACAGGGGC...TCTAGTTGTTGAATGTCCAGTCACATTACACATAGTCCTTTGTGAACTTATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp ATATACTTAACAGGCCAGCTTGCAACCAGTACTCAGTACAAATCAAAGGATGATTCACACATCAAGAGTTaGGCCAGTGAGCTCAATCTT +
Preference number: 4 (lower is better)
Translates to: IYLTGQLATSTQYKSKDDSHIKS*ASELNL
Trigger: AAGATTGAGCTCACTGGCTCAACTCTTGATGTGTGA...ATCATCCTTTGATTTGTACTGAGTACTGGTTGCAAGCTGGCCTGTTAAGTATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp ATTAGAACAATACAGGGAAAATTAGCATGGCCCCTGTGCAAGGATGACACAAATCTAGTTCCTTGGAAATaGCGATCCAGGATGATACAA +
Preference number: 4 (lower is better)
Translates to: IRTIQGKLAWPLCKDDTNLVPWK*RSRMIQ
Trigger: TTGTATCATCCTGGATCGTCATTTCCAAGGAACTAG...ATTTGTGTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTGTATTGTTCTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR GCA 90 bp ATTAGAACAATACAGGGAAAATTAGCATGGCCCCTGTGCAAGGATGACACAAATCATGACCTTCGGAAGTaGTTGCAAAGGCATCTTTTA +
Preference number: 4 (lower is better)
Translates to: IRTIQGKLAWPLCKDDTNHDLRK*LQRHLL
Trigger: TAAAAGATGCCTTTGCAAGCACTTCCGAAGGTCATG...ATTTGTGTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTGTATTGTTCTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR GCA 90 bp GTCTTCAAGTTCAACCTCTATCAAAGAACTCTGAGGAAGAGCAGTAGATGTTTCCATGACCTTCGGAAGTaGTTGCAAAGGCATCTTTTA +
Preference number: 4 (lower is better)
Translates to: VFKFNLYQRTLRKSSRCFHDLRK*LQRHLL
Trigger: TAAAAGATGCCTTTGCAAGCACTTCCGAAGGTCATG...GAAACATCTACTGCTCTTCCTCAGAGTTCTTTGATAGAGGTTGAACTTGAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR GCA 90 bp CAAATAAGTTCACAAAGGACTATGTGTAATGTGACTGGACATTCAACAACTAGATGGGGTCTTATCTGGTaGATCTACCTCAGGGGGTTT +
Preference number: 4 (lower is better)
Translates to: QISSQRTMCNVTGHSTTRWGLIW*IYLRGF
Trigger: AAACCCCCTGAGGTAGATGCACCAGATAAGACCCCA...TCTAGTTGTTGAATGTCCAGTCACATTACACATAGTCCTTTGTGAACTTATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR GCA 90 bp TGTCTGAACTCCCAAGATGTGCTTTCTTTCTTGGAAGTAGGGACAATTTCTCTTCAAGATTTAAGGAGATaGCTTAGGAAGGAGCCTCAT +
Preference number: 4 (lower is better)
Translates to: CLNSQDVLSFLEVGTISLQDLRR*LRKEPH
Trigger: ATGAGGCTCCTTCCTAAGGCATCTCCTTAAATCTTG...AAGAGAAATTGTCCCTACTTCCAAGAAAGAAAGCACATCTTGGGAGTTCAGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR GCA 90 bp GTCTTCAAGTTCAACCTCTATCAAAGAACTCTGAGGAAGAGCAGTAGATGTTTCCAAGATTTAAGGAGATaGCTTAGGAAGGAGCCTCAT +
Preference number: 4 (lower is better)
Translates to: VFKFNLYQRTLRKSSRCFQDLRR*LRKEPH
Trigger: ATGAGGCTCCTTCCTAAGGCATCTCCTTAAATCTTG...GAAACATCTACTGCTCTTCCTCAGAGTTCTTTGATAGAGGTTGAACTTGAAGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR GCA 90 bp ATATACTTAACAGGCCAGCTTGCAACCAGTACTCAGTACAAATCAAAGGATGATCTTAACAGGCCAGCTTaGAACCAGTACTCAGTACAA +
Preference number: 4 (lower is better)
Translates to: IYLTGQLATSTQYKSKDDLNRPA*NQYSVQ
Trigger: TTGTACTGAGTACTGGTTGCAAGCTGGCCTGTTAAG...ATCATCCTTTGATTTGTACTGAGTACTGGTTGCAAGCTGGCCTGTTAAGTATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CCA 90 bp ATTAGAACAATACAGGGAAAATTAGCATGGCCCCTGTGCAAGGATGACACAAATCTGAATAAAACCCAATaGCCTCTCCTTTCTTCCACA +
Preference number: 4 (lower is better)
Translates to: IRTIQGKLAWPLCKDDTNLNKTQ*PLLSST
Trigger: TGTGGAAGAAAGGAGAGGCCATTGGGTTTTATTCAG...ATTTGTGTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTGTATTGTTCTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389156.9
ENST00000510496.5
CDS-3UTR CCA 90 bp CAAATAAGTTCACAAAGGACTATGTGTAATGTGACTGGACATTCAACAACTAGAGTGACTGGTATTCGCTaGTACCAGTGTCCAACACCT +
Preference number: 4 (lower is better)
Translates to: QISSQRTMCNVTGHSTTRVTGIR*YQCPTP
Trigger: AGGTGTTGGACACTGGTACCAGCGAATACCAGTCAC...TCTAGTTGTTGAATGTCCAGTCACATTACACATAGTCCTTTGTGAACTTATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CCA 90 bp TCTTCAAATTTTCCTAGGCCTTTGTTATGGCAACACAATATATACTTAACAGGCGTGACTGGTATTCGCTaGTACCAGTGTCCAACACCT +
Preference number: 4 (lower is better)
Translates to: SSNFPRPLLWQHNIYLTGVTGIR*YQCPTP
Trigger: AGGTGTTGGACACTGGTACCAGCGAATACCAGTCAC...GCCTGTTAAGTATATATTGTGTTGCCATAACAAAGGCCTAGGAAAATTTGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CCA 90 bp ATTAGAACAATACAGGGAAAATTAGCATGGCCCCTGTGCAAGGATGACACAAATTCTTGCTTCGTATTCTaGAACAGATGCAGGACCATA +
Preference number: 4 (lower is better)
Translates to: IRTIQGKLAWPLCKDDTNSCFVF*NRCRTI
Trigger: TATGGTCCTGCATCTGTTCCAGAATACGAAGCAAGA...ATTTGTGTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTGTATTGTTCTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CCA 90 bp ATTAGAACAATACAGGGAAAATTAGCATGGCCCCTGTGCAAGGATGACACAAATGTAGAATTAGGGAGGTaGCAAGATTTAAGGAGATGC +
Preference number: 4 (lower is better)
Translates to: IRTIQGKLAWPLCKDDTNVELGR*QDLRRC
Trigger: GCATCTCCTTAAATCTTGCCACCTCCCTAATTCTAC...ATTTGTGTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTGTATTGTTCTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CCA 90 bp ATATACTTAACAGGCCAGCTTGCAACCAGTACTCAGTACAAATCAAAGGATGATATAGGTCTAACATTGTaGGGTGCACCTCCAAACCTA +
Preference number: 4 (lower is better)
Translates to: IYLTGQLATSTQYKSKDDIGLTL*GAPPNL
Trigger: TAGGTTTGGAGGTGCACCCCACAATGTTAGACCTAT...ATCATCCTTTGATTTGTACTGAGTACTGGTTGCAAGCTGGCCTGTTAAGTATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CCA 90 bp TCTTCAAATTTTCCTAGGCCTTTGTTATGGCAACACAATATATACTTAACAGGCCAGGGAAAATTAGCATaGCCCCTGTGCAAGGATGAC +
Preference number: 4 (lower is better)
Translates to: SSNFPRPLLWQHNIYLTGQGKLA*PLCKDD
Trigger: GTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTG...GCCTGTTAAGTATATATTGTGTTGCCATAACAAAGGCCTAGGAAAATTTGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CCA 90 bp AGGAGACAAATTCTCAGAGACCGGTTCTTCGGAAAATTCAGCTATCACAGAGTTTCTGTTTCAGTTTGCTaGTGTGACCAAACCTTAGAA +
Preference number: 4 (lower is better)
Translates to: RRQILRDRFFGKFSYHRVSVSVC*CDQTLE
Trigger: TTCTAAGGTTTGGTCACACCAGCAAACTGAAACAGA...AACTCTGTGATAGCTGAATTTTCCGAAGAACCGGTCTCTGAGAATTTGTCTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp ATATACTTAACAGGCCAGCTTGCAACCAGTACTCAGTACAAATCAAAGGATGATTGCATCTCACTAGACTaGTTGTCTTCAGTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: IYLTGQLATSTQYKSKDDCISLD*LSSVLA
Trigger: AGCAAGAACTGAAGACAATCAGTCTAGTGAGATGCA...ATCATCCTTTGATTTGTACTGAGTACTGGTTGCAAGCTGGCCTGTTAAGTATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp GGAAAACCACCATCAGATCGTTCTTCATTTGACATAGTAGCAACATTGTCTGAAACAGATGTTTTATCATaGCCTTCGGAAGTGCTTGCA +
Preference number: 4 (lower is better)
Translates to: GKPPSDRSSFDIVATLSETDVLS*PSEVLA
Trigger: TGCAAGCACTTCCGAAGGTCATGATAAAACATCTGT...TTCAGACAATGTTGCTACTATGTCAAATGAAGAACGATCTGATGGTGGTTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp ATATACTTAACAGGCCAGCTTGCAACCAGTACTCAGTACAAATCAAAGGATGATAGTAGCAACATTGTCTaGACTCCCAAGATGTGCTTT +
Preference number: 4 (lower is better)
Translates to: IYLTGQLATSTQYKSKDDSSNIV*TPKMCF
Trigger: AAAGCACATCTTGGGAGTTCAGACAATGTTGCTACT...ATCATCCTTTGATTTGTACTGAGTACTGGTTGCAAGCTGGCCTGTTAAGTATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp TCTTCAAATTTTCCTAGGCCTTTGTTATGGCAACACAATATATACTTAACAGGCCTGTCCTGCATTCTGTaGAAATGGCACGTCTTCAAG +
Preference number: 4 (lower is better)
Translates to: SSNFPRPLLWQHNIYLTGLSCIL*KWHVFK
Trigger: CTTGAAGACGTGCCATTTTCACAGAATGCAGGACAG...GCCTGTTAAGTATATATTGTGTTGCCATAACAAAGGCCTAGGAAAATTTGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp TCTTCAAATTTTCCTAGGCCTTTGTTATGGCAACACAATATATACTTAACAGGCGCCGATTGTGTAAACTaGTCCAGTTGCTCGGAAGAT +
Preference number: 4 (lower is better)
Translates to: SSNFPRPLLWQHNIYLTGADCVN*SSCSED
Trigger: ATCTTCCGAGCAACTGGATCAGTTTACACAATCGGC...GCCTGTTAAGTATATATTGTGTTGCCATAACAAAGGCCTAGGAAAATTTGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp ATTAGAACAATACAGGGAAAATTAGCATGGCCCCTGTGCAAGGATGACACAAATGGAGCCTCATACTTCTaGAATATAGATGTTAACTGG +
Preference number: 4 (lower is better)
Translates to: IRTIQGKLAWPLCKDDTNGASYF*NIDVNW
Trigger: CCAGTTAACATCTATATTTCAGAAGTATGAGGCTCC...ATTTGTGTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTGTATTGTTCTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp AGTATTAGGAGACAAATTCTCAGAGACCGGTTCTTCGGAAAATTCAGCTATCACGGAGCCTCATACTTCTaGAATATAGATGTTAACTGG +
Preference number: 4 (lower is better)
Translates to: SIRRQILRDRFFGKFSYHGASYF*NIDVNW
Trigger: CCAGTTAACATCTATATTTCAGAAGTATGAGGCTCC...GTGATAGCTGAATTTTCCGAAGAACCGGTCTCTGAGAATTTGTCTCCTAATACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp TCTTCAAATTTTCCTAGGCCTTTGTTATGGCAACACAATATATACTTAACAGGCAGCCTCCAATATGATTaGAGCCCTTGTAACCACAGC +
Preference number: 4 (lower is better)
Translates to: SSNFPRPLLWQHNIYLTGSLQYD*SPCNHS
Trigger: GCTGTGGTTACAAGGGCTTCAATCATATTGGAGGCT...GCCTGTTAAGTATATATTGTGTTGCCATAACAAAGGCCTAGGAAAATTTGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp ATTAGAACAATACAGGGAAAATTAGCATGGCCCCTGTGCAAGGATGACACAAATAAGATTTCTAGTCACTaGAACCCCATTGTAGGTAGT +
Preference number: 4 (lower is better)
Translates to: IRTIQGKLAWPLCKDDTNKISSH*NPIVGS
Trigger: ACTACCTACAATGGGGTTTCAGTGACTAGAAATCTT...ATTTGTGTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTGTATTGTTCTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp ATTAGAACAATACAGGGAAAATTAGCATGGCCCCTGTGCAAGGATGACACAAATAATGACGATCCAGGATaGTACAATCACTTGATGACA +
Preference number: 4 (lower is better)
Translates to: IRTIQGKLAWPLCKDDTNNDDPG*YNHLMT
Trigger: TGTCATCAAGTGATTGTATCATCCTGGATCGTCATT...ATTTGTGTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTGTATTGTTCTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp AGTATTAGGAGACAAATTCTCAGAGACCGGTTCTTCGGAAAATTCAGCTATCACAATGACGATCCAGGATaGTACAATCACTTGATGACA +
Preference number: 4 (lower is better)
Translates to: SIRRQILRDRFFGKFSYHNDDPG*YNHLMT
Trigger: TGTCATCAAGTGATTGTATCATCCTGGATCGTCATT...GTGATAGCTGAATTTTCCGAAGAACCGGTCTCTGAGAATTTGTCTCCTAATACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp ATTAGAACAATACAGGGAAAATTAGCATGGCCCCTGTGCAAGGATGACACAAATTCTGAAACATCTTCATaGGGAAAACTGAAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: IRTIQGKLAWPLCKDDTNSETSS*GKLKER
Trigger: CCTTTCCTTCAGTTTTCCTCATGAAGATGTTTCAGA...ATTTGTGTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTGTATTGTTCTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp AGTATTAGGAGACAAATTCTCAGAGACCGGTTCTTCGGAAAATTCAGCTATCACTCTGAAACATCTTCATaGGGAAAACTGAAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: SIRRQILRDRFFGKFSYHSETSS*GKLKER
Trigger: CCTTTCCTTCAGTTTTCCTCATGAAGATGTTTCAGA...GTGATAGCTGAATTTTCCGAAGAACCGGTCTCTGAGAATTTGTCTCCTAATACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp TGTCTGAACTCCCAAGATGTGCTTTCTTTCTTGGAAGTAGGGACAATTTCTCTTTCTGAAACATCTTCATaGGGAAAACTGAAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: CLNSQDVLSFLEVGTISLSETSS*GKLKER
Trigger: CCTTTCCTTCAGTTTTCCTCATGAAGATGTTTCAGA...AAGAGAAATTGTCCCTACTTCCAAGAAAGAAAGCACATCTTGGGAGTTCAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR GCA 90 bp CAAATAAGTTCACAAAGGACTATGTGTAATGTGACTGGACATTCAACAACTAGATGCCACTTAGGTGCATaGAAGTTAGAATCGTGGGCT +
Preference number: 4 (lower is better)
Translates to: QISSQRTMCNVTGHSTTRCHLGA*KLESWA
Trigger: AGCCCACGATTCTAACTTGCATGCACCTAAGTGGCA...TCTAGTTGTTGAATGTCCAGTCACATTACACATAGTCCTTTGTGAACTTATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389156.9
CDS-3UTR GCA 90 bp CAAATAAGTTCACAAAGGACTATGTGTAATGTGACTGGACATTCAACAACTAGACATATCCACAGGGAATaGCATCCTCTTCGCAGGATT +
Preference number: 4 (lower is better)
Translates to: QISSQRTMCNVTGHSTTRHIHRE*HPLRRI
Trigger: AATCCTGCGAAGAGGATGGCATTCCCTGTGGATATG...TCTAGTTGTTGAATGTCCAGTCACATTACACATAGTCCTTTGTGAACTTATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389156.9
ENST00000510496.5
CDS-3UTR GCA 90 bp ATATACTTAACAGGCCAGCTTGCAACCAGTACTCAGTACAAATCAAAGGATGATGTATTCTGGAACAGATaGAGGACCATATTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: IYLTGQLATSTQYKSKDDVFWNR*RTIFSR
Trigger: TCTGGAGAATATGGTCCTGCATCTGTTCCAGAATAC...ATCATCCTTTGATTTGTACTGAGTACTGGTTGCAAGCTGGCCTGTTAAGTATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR GCA 90 bp CAAATAAGTTCACAAAGGACTATGTGTAATGTGACTGGACATTCAACAACTAGATCCTTTTCACCATCTTaGTTCTCTTGCTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: QISSQRTMCNVTGHSTTRSFSPS*FSCCGW
Trigger: CCAGCCACAGCAAGAGAAGCAAGATGGTGAAAAGGA...TCTAGTTGTTGAATGTCCAGTCACATTACACATAGTCCTTTGTGAACTTATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR GCA 90 bp ATTAGAACAATACAGGGAAAATTAGCATGGCCCCTGTGCAAGGATGACACAAATAATTTCTCTTCCATGTaGCCCTTTTCATCAGATGTG +
Preference number: 4 (lower is better)
Translates to: IRTIQGKLAWPLCKDDTNNFSSM*PFSSDV
Trigger: CACATCTGATGAAAAGGGGCACATGGAAGAGAAATT...ATTTGTGTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTGTATTGTTCTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR GCA 90 bp ATATACTTAACAGGCCAGCTTGCAACCAGTACTCAGTACAAATCAAAGGATGATCTATTTCCTCTGAGCTaGTATCCACAGCTTTTTCTG +
Preference number: 4 (lower is better)
Translates to: IYLTGQLATSTQYKSKDDLFPLS*YPQLFL
Trigger: CAGAAAAAGCTGTGGATAGCAGCTCAGAGGAAATAG...ATCATCCTTTGATTTGTACTGAGTACTGGTTGCAAGCTGGCCTGTTAAGTATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR GCA 90 bp ATATACTTAACAGGCCAGCTTGCAACCAGTACTCAGTACAAATCAAAGGATGATTTAGCAGGTCCTTTATaGCCTTTGGCCTTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: IYLTGQLATSTQYKSKDDLAGPL*PLAFLL
Trigger: AAGAAGAAAGGCCAAAGGGCATAAAGGACCTGCTAA...ATCATCCTTTGATTTGTACTGAGTACTGGTTGCAAGCTGGCCTGTTAAGTATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR GCA 90 bp AGGAGACAAATTCTCAGAGACCGGTTCTTCGGAAAATTCAGCTATCACAGAGTTTTGTCCTGTGCCCCATaGTGTTTATTAATTACCATA +
Preference number: 4 (lower is better)
Translates to: RRQILRDRFFGKFSYHRVLSCAP*CLLITI
Trigger: TATGGTAATTAATAAACAGCATGGGGCACAGGACAA...AACTCTGTGATAGCTGAATTTTCCGAAGAACCGGTCTCTGAGAATTTGTCTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR GCA 90 bp ATTAGAACAATACAGGGAAAATTAGCATGGCCCCTGTGCAAGGATGACACAAATAGATCTGTTTCAGTTTaGTGGTGTGACCAAACCTTA +
Preference number: 4 (lower is better)
Translates to: IRTIQGKLAWPLCKDDTNRSVSV*WCDQTL
Trigger: TAAGGTTTGGTCACACCAGCAAACTGAAACAGATCT...ATTTGTGTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTGTATTGTTCTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CCA 90 bp ATATACTTAACAGGCCAGCTTGCAACCAGTACTCAGTACAAATCAAAGGATGATGCTATGACACAGGAATaGGATCTCATTTCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: IYLTGQLATSTQYKSKDDAMTQE*DLISLH
Trigger: ATGGAGAGAAATGAGATCCCATTCCTGTGTCATAGC...ATCATCCTTTGATTTGTACTGAGTACTGGTTGCAAGCTGGCCTGTTAAGTATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389156.9
ENST00000510496.5
CDS-3UTR CCA 90 bp ATATACTTAACAGGCCAGCTTGCAACCAGTACTCAGTACAAATCAAAGGATGATGCTGTAAGTGAAGTCTaGGAGGTCTTTTCATCTTCA +
Preference number: 4 (lower is better)
Translates to: IYLTGQLATSTQYKSKDDAVSEV*EVFSSS
Trigger: TGAAGATGAAAAGACCTCCCAGACTTCACTTACAGC...ATCATCCTTTGATTTGTACTGAGTACTGGTTGCAAGCTGGCCTGTTAAGTATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CCA 90 bp ATTAGAACAATACAGGGAAAATTAGCATGGCCCCTGTGCAAGGATGACACAAATAGATTCTACCACCAGTaGAACAAGATTTGTAGAGTC +
Preference number: 4 (lower is better)
Translates to: IRTIQGKLAWPLCKDDTNRFYHQ*NKICRV
Trigger: GACTCTACAAATCTTGTTCCACTGGTGGTAGAATCT...ATTTGTGTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTGTATTGTTCTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CCA 90 bp ATATACTTAACAGGCCAGCTTGCAACCAGTACTCAGTACAAATCAAAGGATGATAGCTATCACAGAGTTTaGAAAACCACCATCAGATCG +
Preference number: 4 (lower is better)
Translates to: IYLTGQLATSTQYKSKDDSYHRV*KTTIRS
Trigger: CGATCTGATGGTGGTTTTCCAAACTCTGTGATAGCT...ATCATCCTTTGATTTGTACTGAGTACTGGTTGCAAGCTGGCCTGTTAAGTATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
3UTR CAA 72 bp CCATCAGATCGTTCTTCATTTGACATAGTAGCAACATaGTCTGAACTCCCAAGATGTGCTTTCTTTCTTGGA +
Preference number: 4 (lower is better)
Translates to: PSDRSSFDIVAT*SELPRCAFFLG
Trigger: TCCAAGAAAGAAAGCACATCTTGGGAGTTCAGACAATGTTGCTACTATGTCAAATGAAGAACGATCTGATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp CAAATAAGTTCACAAAGGACTATGTGTAATGTGACTGGACATTCAACAACTAGATCCTGTAGGCTTAACTaGATAAAACCCAATGGCCTC +
Preference number: 4 (lower is better)
Translates to: QISSQRTMCNVTGHSTTRSCRLN*IKPNGL
Trigger: GAGGCCATTGGGTTTTATTCAGTTAAGCCTACAGGA...TCTAGTTGTTGAATGTCCAGTCACATTACACATAGTCCTTTGTGAACTTATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389156.9
CDS-3UTR TCA 90 bp CAAATAAGTTCACAAAGGACTATGTGTAATGTGACTGGACATTCAACAACTAGATGCAAGCTGTATACATaGGAGAAGACAGTGGATACC +
Preference number: 4 (lower is better)
Translates to: QISSQRTMCNVTGHSTTRCKLYT*EKTVDT
Trigger: GGTATCCACTGTCTTCTCTCATGTATACAGCTTGCA...TCTAGTTGTTGAATGTCCAGTCACATTACACATAGTCCTTTGTGAACTTATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389156.9
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp ATTAGAACAATACAGGGAAAATTAGCATGGCCCCTGTGCAAGGATGACACAAATTTACCACTTCGAGTATaGGTGGAAACAGATGTTTTA +
Preference number: 4 (lower is better)
Translates to: IRTIQGKLAWPLCKDDTNLPLRV*VETDVL
Trigger: TAAAACATCTGTTTCCACTCATACTCGAAGTGGTAA...ATTTGTGTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTGTATTGTTCTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp AGTATTAGGAGACAAATTCTCAGAGACCGGTTCTTCGGAAAATTCAGCTATCACTTACCACTTCGAGTATaGGTGGAAACAGATGTTTTA +
Preference number: 4 (lower is better)
Translates to: SIRRQILRDRFFGKFSYHLPLRV*VETDVL
Trigger: TAAAACATCTGTTTCCACTCATACTCGAAGTGGTAA...GTGATAGCTGAATTTTCCGAAGAACCGGTCTCTGAGAATTTGTCTCCTAATACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp GTCTTCAAGTTCAACCTCTATCAAAGAACTCTGAGGAAGAGCAGTAGATGTTTCCTAAATTCAGAATCCTaGAACCGCTTTCCAATCTTT +
Preference number: 4 (lower is better)
Translates to: VFKFNLYQRTLRKSSRCFLNSES*NRFPIF
Trigger: AAAGATTGGAAAGCGGTTTCAGGATTCTGAATTTAG...GAAACATCTACTGCTCTTCCTCAGAGTTCTTTGATAGAGGTTGAACTTGAAGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp ATATACTTAACAGGCCAGCTTGCAACCAGTACTCAGTACAAATCAAAGGATGATCTCTTCTGTTATAAGTaGGGTCTTAAGAGAATCGTC +
Preference number: 4 (lower is better)
Translates to: IYLTGQLATSTQYKSKDDLFCYK*GLKRIV
Trigger: GACGATTCTCTTAAGACCTCACTTATAACAGAAGAG...ATCATCCTTTGATTTGTACTGAGTACTGGTTGCAAGCTGGCCTGTTAAGTATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp TCTTCAAATTTTCCTAGGCCTTTGTTATGGCAACACAATATATACTTAACAGGCATCCATCAACATTTCTaGGTCAGGTATACGTGGGGT +
Preference number: 4 (lower is better)
Translates to: SSNFPRPLLWQHNIYLTGIHQHF*VRYTWG
Trigger: ACCCCACGTATACCTGACTCAGAAATGTTGATGGAT...GCCTGTTAAGTATATATTGTGTTGCCATAACAAAGGCCTAGGAAAATTTGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp ATATACTTAACAGGCCAGCTTGCAACCAGTACTCAGTACAAATCAAAGGATGATTCTATCAAAGAACTCTaGGGAAGAGCAGTAGATGTT +
Preference number: 4 (lower is better)
Translates to: IYLTGQLATSTQYKSKDDSIKEL*GRAVDV
Trigger: AACATCTACTGCTCTTCCTCAGAGTTCTTTGATAGA...ATCATCCTTTGATTTGTACTGAGTACTGGTTGCAAGCTGGCCTGTTAAGTATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp ATTAGAACAATACAGGGAAAATTAGCATGGCCCCTGTGCAAGGATGACACAAATCCAAACAAAATTTACTaGCCTGACATCAGCTTACTA +
Preference number: 4 (lower is better)
Translates to: IRTIQGKLAWPLCKDDTNPNKIY*PDISLL
Trigger: TAGTAAGCTGATGTCAGGTCAGTAAATTTTGTTTGG...ATTTGTGTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTGTATTGTTCTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp ATATACTTAACAGGCCAGCTTGCAACCAGTACTCAGTACAAATCAAAGGATGATAAGATTTCTAGTCACTaGAACCCCATTGTAGGTAGT +
Preference number: 4 (lower is better)
Translates to: IYLTGQLATSTQYKSKDDKISSH*NPIVGS
Trigger: ACTACCTACAATGGGGTTTCAGTGACTAGAAATCTT...ATCATCCTTTGATTTGTACTGAGTACTGGTTGCAAGCTGGCCTGTTAAGTATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp GGAAAACCACCATCAGATCGTTCTTCATTTGACATAGTAGCAACATTGTCTGAAAAGATTTCTAGTCACTaGAACCCCATTGTAGGTAGT +
Preference number: 4 (lower is better)
Translates to: GKPPSDRSSFDIVATLSEKISSH*NPIVGS
Trigger: ACTACCTACAATGGGGTTTCAGTGACTAGAAATCTT...TTCAGACAATGTTGCTACTATGTCAAATGAAGAACGATCTGATGGTGGTTTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp ATTAGAACAATACAGGGAAAATTAGCATGGCCCCTGTGCAAGGATGACACAAATAGTACAGGCTCAATTTaGTGCAATCATAAACCTTCA +
Preference number: 4 (lower is better)
Translates to: IRTIQGKLAWPLCKDDTNSTGSI*CNHKPS
Trigger: TGAAGGTTTATGATTGCATCAAATTGAGCCTGTACT...ATTTGTGTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTGTATTGTTCTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp ATTAGAACAATACAGGGAAAATTAGCATGGCCCCTGTGCAAGGATGACACAAATACTAATATAAATGGGTaGTGTGTGGATCACAAGTTC +
Preference number: 4 (lower is better)
Translates to: IRTIQGKLAWPLCKDDTNTNING*CVDHKF
Trigger: GAACTTGTGATCCACACATCACCCATTTATATTAGT...ATTTGTGTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTGTATTGTTCTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp TGTCTGAACTCCCAAGATGTGCTTTCTTTCTTGGAAGTAGGGACAATTTCTCTTACTAATATAAATGGGTaGTGTGTGGATCACAAGTTC +
Preference number: 4 (lower is better)
Translates to: CLNSQDVLSFLEVGTISLTNING*CVDHKF
Trigger: GAACTTGTGATCCACACATCACCCATTTATATTAGT...AAGAGAAATTGTCCCTACTTCCAAGAAAGAAAGCACATCTTGGGAGTTCAGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp ATATACTTAACAGGCCAGCTTGCAACCAGTACTCAGTACAAATCAAAGGATGATTCTGAAACATCTTCATaGGGAAAACTGAAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: IYLTGQLATSTQYKSKDDSETSS*GKLKER
Trigger: CCTTTCCTTCAGTTTTCCTCATGAAGATGTTTCAGA...ATCATCCTTTGATTTGTACTGAGTACTGGTTGCAAGCTGGCCTGTTAAGTATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR GCA 90 bp AGTATTAGGAGACAAATTCTCAGAGACCGGTTCTTCGGAAAATTCAGCTATCACATTGTCTTCAGTTCTTaGTTCGTATTCTGGAACAGA +
Preference number: 4 (lower is better)
Translates to: SIRRQILRDRFFGKFSYHIVFSS*FVFWNR
Trigger: TCTGTTCCAGAATACGAAGCAAGAACTGAAGACAAT...GTGATAGCTGAATTTTCCGAAGAACCGGTCTCTGAGAATTTGTCTCCTAATACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR GCA 90 bp GTCTTCAAGTTCAACCTCTATCAAAGAACTCTGAGGAAGAGCAGTAGATGTTTCATTGTCTTCAGTTCTTaGTTCGTATTCTGGAACAGA +
Preference number: 4 (lower is better)
Translates to: VFKFNLYQRTLRKSSRCFIVFSS*FVFWNR
Trigger: TCTGTTCCAGAATACGAAGCAAGAACTGAAGACAAT...GAAACATCTACTGCTCTTCCTCAGAGTTCTTTGATAGAGGTTGAACTTGAAGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR GCA 90 bp AGTATTAGGAGACAAATTCTCAGAGACCGGTTCTTCGGAAAATTCAGCTATCACCCTTTTCATCAGATGTaGCTTCATCCATCAACATTT +
Preference number: 4 (lower is better)
Translates to: SIRRQILRDRFFGKFSYHPFHQM*LHPSTF
Trigger: AAATGTTGATGGATGAAGGCACATCTGATGAAAAGG...GTGATAGCTGAATTTTCCGAAGAACCGGTCTCTGAGAATTTGTCTCCTAATACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR GCA 90 bp GTCTTCAAGTTCAACCTCTATCAAAGAACTCTGAGGAAGAGCAGTAGATGTTTCCCTTTTCATCAGATGTaGCTTCATCCATCAACATTT +
Preference number: 4 (lower is better)
Translates to: VFKFNLYQRTLRKSSRCFPFHQM*LHPSTF
Trigger: AAATGTTGATGGATGAAGGCACATCTGATGAAAAGG...GAAACATCTACTGCTCTTCCTCAGAGTTCTTTGATAGAGGTTGAACTTGAAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR GCA 90 bp ATATACTTAACAGGCCAGCTTGCAACCAGTACTCAGTACAAATCAAAGGATGATATCCACAGCTTTTTCTaGCGATTGTGTAAACTGATC +
Preference number: 4 (lower is better)
Translates to: IYLTGQLATSTQYKSKDDIHSFF*RLCKLI
Trigger: GATCAGTTTACACAATCGGCAGAAAAAGCTGTGGAT...ATCATCCTTTGATTTGTACTGAGTACTGGTTGCAAGCTGGCCTGTTAAGTATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR GCA 90 bp ATTAGAACAATACAGGGAAAATTAGCATGGCCCCTGTGCAAGGATGACACAAATTTGTCCTGTGCCCCATaGTGTTTATTAATTACCATA +
Preference number: 4 (lower is better)
Translates to: IRTIQGKLAWPLCKDDTNLSCAP*CLLITI
Trigger: TATGGTAATTAATAAACAGCATGGGGCACAGGACAA...ATTTGTGTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTGTATTGTTCTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR GCA 90 bp ATATACTTAACAGGCCAGCTTGCAACCAGTACTCAGTACAAATCAAAGGATGATAGATCTGTTTCAGTTTaGTGGTGTGACCAAACCTTA +
Preference number: 4 (lower is better)
Translates to: IYLTGQLATSTQYKSKDDRSVSV*WCDQTL
Trigger: TAAGGTTTGGTCACACCAGCAAACTGAAACAGATCT...ATCATCCTTTGATTTGTACTGAGTACTGGTTGCAAGCTGGCCTGTTAAGTATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CCA 90 bp TCTTCAAATTTTCCTAGGCCTTTGTTATGGCAACACAATATATACTTAACAGGCTCCCAAAGGAGTTCATaGTCTCCTGGATACTTCTCA +
Preference number: 4 (lower is better)
Translates to: SSNFPRPLLWQHNIYLTGSQRSS*SPGYFS
Trigger: TGAGAAGTATCCAGGAGACCATGAACTCCTTTGGGA...GCCTGTTAAGTATATATTGTGTTGCCATAACAAAGGCCTAGGAAAATTTGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CCA 90 bp ATATACTTAACAGGCCAGCTTGCAACCAGTACTCAGTACAAATCAAAGGATGATAGATTCTACCACCAGTaGAACAAGATTTGTAGAGTC +
Preference number: 4 (lower is better)
Translates to: IYLTGQLATSTQYKSKDDRFYHQ*NKICRV
Trigger: GACTCTACAAATCTTGTTCCACTGGTGGTAGAATCT...ATCATCCTTTGATTTGTACTGAGTACTGGTTGCAAGCTGGCCTGTTAAGTATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CCA 90 bp ATATACTTAACAGGCCAGCTTGCAACCAGTACTCAGTACAAATCAAAGGATGATTCTGTTTCAGTTTGCTaGTGTGACCAAACCTTAGAA +
Preference number: 4 (lower is better)
Translates to: IYLTGQLATSTQYKSKDDSVSVC*CDQTLE
Trigger: TTCTAAGGTTTGGTCACACCAGCAAACTGAAACAGA...ATCATCCTTTGATTTGTACTGAGTACTGGTTGCAAGCTGGCCTGTTAAGTATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp CAAATAAGTTCACAAAGGACTATGTGTAATGTGACTGGACATTCAACAACTAGAACAGATGTTTTATCATaGCCTTCGGAAGTGCTTGCA +
Preference number: 4 (lower is better)
Translates to: QISSQRTMCNVTGHSTTRTDVLS*PSEVLA
Trigger: TGCAAGCACTTCCGAAGGTCATGATAAAACATCTGT...TCTAGTTGTTGAATGTCCAGTCACATTACACATAGTCCTTTGTGAACTTATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp TCTTCAAATTTTCCTAGGCCTTTGTTATGGCAACACAATATATACTTAACAGGCACAGATGTTTTATCATaGCCTTCGGAAGTGCTTGCA +
Preference number: 4 (lower is better)
Translates to: SSNFPRPLLWQHNIYLTGTDVLS*PSEVLA
Trigger: TGCAAGCACTTCCGAAGGTCATGATAAAACATCTGT...GCCTGTTAAGTATATATTGTGTTGCCATAACAAAGGCCTAGGAAAATTTGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp GGAAAACCACCATCAGATCGTTCTTCATTTGACATAGTAGCAACATTGTCTGAAAGATCGTTCTTCATTTaGCATAGTAGCAACATTGTC +
Preference number: 4 (lower is better)
Translates to: GKPPSDRSSFDIVATLSERSFFI*HSSNIV
Trigger: GACAATGTTGCTACTATGTCAAATGAAGAACGATCT...TTCAGACAATGTTGCTACTATGTCAAATGAAGAACGATCTGATGGTGGTTTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp TCTTCAAATTTTCCTAGGCCTTTGTTATGGCAACACAATATATACTTAACAGGCACTAGACTAGCCGGTTaGAATCACATTTTCAGTCCT +
Preference number: 4 (lower is better)
Translates to: SSNFPRPLLWQHNIYLTGTRLAG*NHIFSP
Trigger: AGGACTGAAAATGTGATTTCAACCGGCTAGTCTAGT...GCCTGTTAAGTATATATTGTGTTGCCATAACAAAGGCCTAGGAAAATTTGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp CAAATAAGTTCACAAAGGACTATGTGTAATGTGACTGGACATTCAACAACTAGAACTAGACTAGCCGGTTaGAATCACATTTTCAGTCCT +
Preference number: 4 (lower is better)
Translates to: QISSQRTMCNVTGHSTTRTRLAG*NHIFSP
Trigger: AGGACTGAAAATGTGATTTCAACCGGCTAGTCTAGT...TCTAGTTGTTGAATGTCCAGTCACATTACACATAGTCCTTTGTGAACTTATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp ATATACTTAACAGGCCAGCTTGCAACCAGTACTCAGTACAAATCAAAGGATGATACTAATATAAATGGGTaGTGTGTGGATCACAAGTTC +
Preference number: 4 (lower is better)
Translates to: IYLTGQLATSTQYKSKDDTNING*CVDHKF
Trigger: GAACTTGTGATCCACACATCACCCATTTATATTAGT...ATCATCCTTTGATTTGTACTGAGTACTGGTTGCAAGCTGGCCTGTTAAGTATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp CAAATAAGTTCACAAAGGACTATGTGTAATGTGACTGGACATTCAACAACTAGACTAGTTCCTTGGAAATaGCGATCCAGGATGATACAA +
Preference number: 4 (lower is better)
Translates to: QISSQRTMCNVTGHSTTRLVPWK*RSRMIQ
Trigger: TTGTATCATCCTGGATCGTCATTTCCAAGGAACTAG...TCTAGTTGTTGAATGTCCAGTCACATTACACATAGTCCTTTGTGAACTTATTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp TCTTCAAATTTTCCTAGGCCTTTGTTATGGCAACACAATATATACTTAACAGGCCTAGTTCCTTGGAAATaGCGATCCAGGATGATACAA +
Preference number: 4 (lower is better)
Translates to: SSNFPRPLLWQHNIYLTGLVPWK*RSRMIQ
Trigger: TTGTATCATCCTGGATCGTCATTTCCAAGGAACTAG...GCCTGTTAAGTATATATTGTGTTGCCATAACAAAGGCCTAGGAAAATTTGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR GCA 90 bp TGTCTGAACTCCCAAGATGTGCTTTCTTTCTTGGAAGTAGGGACAATTTCTCTTTACTTCTCAAAGTATTaGTTGCAAGCTGTATACATG +
Preference number: 4 (lower is better)
Translates to: CLNSQDVLSFLEVGTISLYFSKY*LQAVYM
Trigger: CATGTATACAGCTTGCAAGCAATACTTTGAGAAGTA...AAGAGAAATTGTCCCTACTTCCAAGAAAGAAAGCACATCTTGGGAGTTCAGACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR GCA 90 bp CAAATAAGTTCACAAAGGACTATGTGTAATGTGACTGGACATTCAACAACTAGACTATTTCCTCTGAGCTaGTATCCACAGCTTTTTCTG +
Preference number: 4 (lower is better)
Translates to: QISSQRTMCNVTGHSTTRLFPLS*YPQLFL
Trigger: CAGAAAAAGCTGTGGATAGCAGCTCAGAGGAAATAG...TCTAGTTGTTGAATGTCCAGTCACATTACACATAGTCCTTTGTGAACTTATTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR GCA 90 bp TCTTCAAATTTTCCTAGGCCTTTGTTATGGCAACACAATATATACTTAACAGGCTTAGCAGGTCCTTTATaGCCTTTGGCCTTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: SSNFPRPLLWQHNIYLTGLAGPL*PLAFLL
Trigger: AAGAAGAAAGGCCAAAGGGCATAAAGGACCTGCTAA...GCCTGTTAAGTATATATTGTGTTGCCATAACAAAGGCCTAGGAAAATTTGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR GCA 90 bp TCTTCAAATTTTCCTAGGCCTTTGTTATGGCAACACAATATATACTTAACAGGCCAAGATTTAAGGAGATaGCTTAGGAAGGAGCCTCAT +
Preference number: 4 (lower is better)
Translates to: SSNFPRPLLWQHNIYLTGQDLRR*LRKEPH
Trigger: ATGAGGCTCCTTCCTAAGGCATCTCCTTAAATCTTG...GCCTGTTAAGTATATATTGTGTTGCCATAACAAAGGCCTAGGAAAATTTGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CCA 90 bp ATATACTTAACAGGCCAGCTTGCAACCAGTACTCAGTACAAATCAAAGGATGATTTTTCCAATTCCTCATaGCTGCAATTTTCCAGCATA +
Preference number: 4 (lower is better)
Translates to: IYLTGQLATSTQYKSKDDFSNSS*LQFSSI
Trigger: TATGCTGGAAAATTGCAGCCATGAGGAATTGGAAAA...ATCATCCTTTGATTTGTACTGAGTACTGGTTGCAAGCTGGCCTGTTAAGTATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CCA 90 bp CAAATAAGTTCACAAAGGACTATGTGTAATGTGACTGGACATTCAACAACTAGAGCTATGACACAGGAATaGGATCTCATTTCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: QISSQRTMCNVTGHSTTRAMTQE*DLISLH
Trigger: ATGGAGAGAAATGAGATCCCATTCCTGTGTCATAGC...TCTAGTTGTTGAATGTCCAGTCACATTACACATAGTCCTTTGTGAACTTATTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389156.9
ENST00000510496.5
CDS-3UTR CCA 90 bp TCTTCAAATTTTCCTAGGCCTTTGTTATGGCAACACAATATATACTTAACAGGCCTGAATAAAACCCAATaGCCTCTCCTTTCTTCCACA +
Preference number: 4 (lower is better)
Translates to: SSNFPRPLLWQHNIYLTGLNKTQ*PLLSST
Trigger: TGTGGAAGAAAGGAGAGGCCATTGGGTTTTATTCAG...GCCTGTTAAGTATATATTGTGTTGCCATAACAAAGGCCTAGGAAAATTTGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389156.9
ENST00000510496.5
CDS-3UTR CCA 90 bp CAAATAAGTTCACAAAGGACTATGTGTAATGTGACTGGACATTCAACAACTAGATCTTGCTTCGTATTCTaGAACAGATGCAGGACCATA +
Preference number: 4 (lower is better)
Translates to: QISSQRTMCNVTGHSTTRSCFVF*NRCRTI
Trigger: TATGGTCCTGCATCTGTTCCAGAATACGAAGCAAGA...TCTAGTTGTTGAATGTCCAGTCACATTACACATAGTCCTTTGTGAACTTATTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CCA 90 bp ATTAGAACAATACAGGGAAAATTAGCATGGCCCCTGTGCAAGGATGACACAAATCACTTCGAGTATGAGTaGAAACAGATGTTTTATCAT +
Preference number: 4 (lower is better)
Translates to: IRTIQGKLAWPLCKDDTNHFEYE*KQMFYH
Trigger: ATGATAAAACATCTGTTTCCACTCATACTCGAAGTG...ATTTGTGTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTGTATTGTTCTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CCA 90 bp CAAATAAGTTCACAAAGGACTATGTGTAATGTGACTGGACATTCAACAACTAGAGCTGTAAGTGAAGTCTaGGAGGTCTTTTCATCTTCA +
Preference number: 4 (lower is better)
Translates to: QISSQRTMCNVTGHSTTRAVSEV*EVFSSS
Trigger: TGAAGATGAAAAGACCTCCCAGACTTCACTTACAGC...TCTAGTTGTTGAATGTCCAGTCACATTACACATAGTCCTTTGTGAACTTATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CCA 90 bp TCTTCAAATTTTCCTAGGCCTTTGTTATGGCAACACAATATATACTTAACAGGCAGCTATCACAGAGTTTaGAAAACCACCATCAGATCG +
Preference number: 4 (lower is better)
Translates to: SSNFPRPLLWQHNIYLTGSYHRV*KTTIRS
Trigger: CGATCTGATGGTGGTTTTCCAAACTCTGTGATAGCT...GCCTGTTAAGTATATATTGTGTTGCCATAACAAAGGCCTAGGAAAATTTGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp TCTTCAAATTTTCCTAGGCCTTTGTTATGGCAACACAATATATACTTAACAGGCCTCTTCTGTTATAAGTaGGGTCTTAAGAGAATCGTC +
Preference number: 4 (lower is better)
Translates to: SSNFPRPLLWQHNIYLTGLFCYK*GLKRIV
Trigger: GACGATTCTCTTAAGACCTCACTTATAACAGAAGAG...GCCTGTTAAGTATATATTGTGTTGCCATAACAAAGGCCTAGGAAAATTTGAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp CAAATAAGTTCACAAAGGACTATGTGTAATGTGACTGGACATTCAACAACTAGACTCTTCTGTTATAAGTaGGGTCTTAAGAGAATCGTC +
Preference number: 4 (lower is better)
Translates to: QISSQRTMCNVTGHSTTRLFCYK*GLKRIV
Trigger: GACGATTCTCTTAAGACCTCACTTATAACAGAAGAG...TCTAGTTGTTGAATGTCCAGTCACATTACACATAGTCCTTTGTGAACTTATTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp CAAATAAGTTCACAAAGGACTATGTGTAATGTGACTGGACATTCAACAACTAGATCTATCAAAGAACTCTaGGGAAGAGCAGTAGATGTT +
Preference number: 4 (lower is better)
Translates to: QISSQRTMCNVTGHSTTRSIKEL*GRAVDV
Trigger: AACATCTACTGCTCTTCCTCAGAGTTCTTTGATAGA...TCTAGTTGTTGAATGTCCAGTCACATTACACATAGTCCTTTGTGAACTTATTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp CAAATAAGTTCACAAAGGACTATGTGTAATGTGACTGGACATTCAACAACTAGAGGACTATGTGTAATGTaGCTGGACATTCAACAACTA +
Preference number: 4 (lower is better)
Translates to: QISSQRTMCNVTGHSTTRGLCVM*LDIQQL
Trigger: TAGTTGTTGAATGTCCAGTCACATTACACATAGTCC...TCTAGTTGTTGAATGTCCAGTCACATTACACATAGTCCTTTGTGAACTTATTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp TCTTCAAATTTTCCTAGGCCTTTGTTATGGCAACACAATATATACTTAACAGGCAATGACGATCCAGGATaGTACAATCACTTGATGACA +
Preference number: 4 (lower is better)
Translates to: SSNFPRPLLWQHNIYLTGNDDPG*YNHLMT
Trigger: TGTCATCAAGTGATTGTATCATCCTGGATCGTCATT...GCCTGTTAAGTATATATTGTGTTGCCATAACAAAGGCCTAGGAAAATTTGAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp CAAATAAGTTCACAAAGGACTATGTGTAATGTGACTGGACATTCAACAACTAGAAATGACGATCCAGGATaGTACAATCACTTGATGACA +
Preference number: 4 (lower is better)
Translates to: QISSQRTMCNVTGHSTTRNDDPG*YNHLMT
Trigger: TGTCATCAAGTGATTGTATCATCCTGGATCGTCATT...TCTAGTTGTTGAATGTCCAGTCACATTACACATAGTCCTTTGTGAACTTATTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR GCA 90 bp ATATACTTAACAGGCCAGCTTGCAACCAGTACTCAGTACAAATCAAAGGATGATTACTTCTCAAAGTATTaGTTGCAAGCTGTATACATG +
Preference number: 4 (lower is better)
Translates to: IYLTGQLATSTQYKSKDDYFSKY*LQAVYM
Trigger: CATGTATACAGCTTGCAAGCAATACTTTGAGAAGTA...ATCATCCTTTGATTTGTACTGAGTACTGGTTGCAAGCTGGCCTGTTAAGTATAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389156.9
ENST00000510609.5
ENST00000514215.5
CDS-3UTR GCA 90 bp TCTTCAAATTTTCCTAGGCCTTTGTTATGGCAACACAATATATACTTAACAGGCAATTTCTCTTCCATGTaGCCCTTTTCATCAGATGTG +
Preference number: 4 (lower is better)
Translates to: SSNFPRPLLWQHNIYLTGNFSSM*PFSSDV
Trigger: CACATCTGATGAAAAGGGGCACATGGAAGAGAAATT...GCCTGTTAAGTATATATTGTGTTGCCATAACAAAGGCCTAGGAAAATTTGAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR GCA 90 bp CAAATAAGTTCACAAAGGACTATGTGTAATGTGACTGGACATTCAACAACTAGAAATTTCTCTTCCATGTaGCCCTTTTCATCAGATGTG +
Preference number: 4 (lower is better)
Translates to: QISSQRTMCNVTGHSTTRNFSSM*PFSSDV
Trigger: CACATCTGATGAAAAGGGGCACATGGAAGAGAAATT...TCTAGTTGTTGAATGTCCAGTCACATTACACATAGTCCTTTGTGAACTTATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR GCA 90 bp TCTTCAAATTTTCCTAGGCCTTTGTTATGGCAACACAATATATACTTAACAGGCATCCACAGCTTTTTCTaGCGATTGTGTAAACTGATC +
Preference number: 4 (lower is better)
Translates to: SSNFPRPLLWQHNIYLTGIHSFF*RLCKLI
Trigger: GATCAGTTTACACAATCGGCAGAAAAAGCTGTGGAT...GCCTGTTAAGTATATATTGTGTTGCCATAACAAAGGCCTAGGAAAATTTGAAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR GCA 90 bp ATATACTTAACAGGCCAGCTTGCAACCAGTACTCAGTACAAATCAAAGGATGATGAAATTTTTGTCCTGTaGCCCATGCTGTTTATTAAT +
Preference number: 4 (lower is better)
Translates to: IYLTGQLATSTQYKSKDDEIFVL*PMLFIN
Trigger: ATTAATAAACAGCATGGGGCACAGGACAAAAATTTC...ATCATCCTTTGATTTGTACTGAGTACTGGTTGCAAGCTGGCCTGTTAAGTATAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CCA 90 bp CAAATAAGTTCACAAAGGACTATGTGTAATGTGACTGGACATTCAACAACTAGAAGATTCTACCACCAGTaGAACAAGATTTGTAGAGTC +
Preference number: 4 (lower is better)
Translates to: QISSQRTMCNVTGHSTTRRFYHQ*NKICRV
Trigger: GACTCTACAAATCTTGTTCCACTGGTGGTAGAATCT...TCTAGTTGTTGAATGTCCAGTCACATTACACATAGTCCTTTGTGAACTTATTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp TCTTCAAATTTTCCTAGGCCTTTGTTATGGCAACACAATATATACTTAACAGGCCTAAATTCAGAATCCTaGAACCGCTTTCCAATCTTT +
Preference number: 4 (lower is better)
Translates to: SSNFPRPLLWQHNIYLTGLNSES*NRFPIF
Trigger: AAAGATTGGAAAGCGGTTTCAGGATTCTGAATTTAG...GCCTGTTAAGTATATATTGTGTTGCCATAACAAAGGCCTAGGAAAATTTGAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp CAAATAAGTTCACAAAGGACTATGTGTAATGTGACTGGACATTCAACAACTAGACTAAATTCAGAATCCTaGAACCGCTTTCCAATCTTT +
Preference number: 4 (lower is better)
Translates to: QISSQRTMCNVTGHSTTRLNSES*NRFPIF
Trigger: AAAGATTGGAAAGCGGTTTCAGGATTCTGAATTTAG...TCTAGTTGTTGAATGTCCAGTCACATTACACATAGTCCTTTGTGAACTTATTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp CAAATAAGTTCACAAAGGACTATGTGTAATGTGACTGGACATTCAACAACTAGAAGATCGTTCTTCATTTaGCATAGTAGCAACATTGTC +
Preference number: 4 (lower is better)
Translates to: QISSQRTMCNVTGHSTTRRSFFI*HSSNIV
Trigger: GACAATGTTGCTACTATGTCAAATGAAGAACGATCT...TCTAGTTGTTGAATGTCCAGTCACATTACACATAGTCCTTTGTGAACTTATTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp TCTTCAAATTTTCCTAGGCCTTTGTTATGGCAACACAATATATACTTAACAGGCCAAAATTTACTGACCTaGCATCAGCTTACTATAGAC +
Preference number: 4 (lower is better)
Translates to: SSNFPRPLLWQHNIYLTGQNLLT*HQLTID
Trigger: GTCTATAGTAAGCTGATGTCAGGTCAGTAAATTTTG...GCCTGTTAAGTATATATTGTGTTGCCATAACAAAGGCCTAGGAAAATTTGAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp CAAATAAGTTCACAAAGGACTATGTGTAATGTGACTGGACATTCAACAACTAGACCAAACAAAATTTACTaGCCTGACATCAGCTTACTA +
Preference number: 4 (lower is better)
Translates to: QISSQRTMCNVTGHSTTRPNKIY*PDISLL
Trigger: TAGTAAGCTGATGTCAGGTCAGTAAATTTTGTTTGG...TCTAGTTGTTGAATGTCCAGTCACATTACACATAGTCCTTTGTGAACTTATTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp CAAATAAGTTCACAAAGGACTATGTGTAATGTGACTGGACATTCAACAACTAGAAGTACAGGCTCAATTTaGTGCAATCATAAACCTTCA +
Preference number: 4 (lower is better)
Translates to: QISSQRTMCNVTGHSTTRSTGSI*CNHKPS
Trigger: TGAAGGTTTATGATTGCATCAAATTGAGCCTGTACT...TCTAGTTGTTGAATGTCCAGTCACATTACACATAGTCCTTTGTGAACTTATTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR TCA 90 bp TCTTCAAATTTTCCTAGGCCTTTGTTATGGCAACACAATATATACTTAACAGGCAGTACAGGCTCAATTTaGTGCAATCATAAACCTTCA +
Preference number: 4 (lower is better)
Translates to: SSNFPRPLLWQHNIYLTGSTGSI*CNHKPS
Trigger: TGAAGGTTTATGATTGCATCAAATTGAGCCTGTACT...GCCTGTTAAGTATATATTGTGTTGCCATAACAAAGGCCTAGGAAAATTTGAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR GCA 90 bp TCTTCAAATTTTCCTAGGCCTTTGTTATGGCAACACAATATATACTTAACAGGCATTGTCTTCAGTTCTTaGTTCGTATTCTGGAACAGA +
Preference number: 4 (lower is better)
Translates to: SSNFPRPLLWQHNIYLTGIVFSS*FVFWNR
Trigger: TCTGTTCCAGAATACGAAGCAAGAACTGAAGACAAT...GCCTGTTAAGTATATATTGTGTTGCCATAACAAAGGCCTAGGAAAATTTGAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR GCA 90 bp TCTTCAAATTTTCCTAGGCCTTTGTTATGGCAACACAATATATACTTAACAGGCCCTTTTCATCAGATGTaGCTTCATCCATCAACATTT +
Preference number: 4 (lower is better)
Translates to: SSNFPRPLLWQHNIYLTGPFHQM*LHPSTF
Trigger: AAATGTTGATGGATGAAGGCACATCTGATGAAAAGG...GCCTGTTAAGTATATATTGTGTTGCCATAACAAAGGCCTAGGAAAATTTGAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CCA 90 bp TCTTCAAATTTTCCTAGGCCTTTGTTATGGCAACACAATATATACTTAACAGGCTTTTCCAATTCCTCATaGCTGCAATTTTCCAGCATA +
Preference number: 4 (lower is better)
Translates to: SSNFPRPLLWQHNIYLTGFSNSS*LQFSSI
Trigger: TATGCTGGAAAATTGCAGCCATGAGGAATTGGAAAA...GCCTGTTAAGTATATATTGTGTTGCCATAACAAAGGCCTAGGAAAATTTGAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR GCA 90 bp TCTTCAAATTTTCCTAGGCCTTTGTTATGGCAACACAATATATACTTAACAGGCGAAATTTTTGTCCTGTaGCCCATGCTGTTTATTAAT +
Preference number: 4 (lower is better)
Translates to: SSNFPRPLLWQHNIYLTGEIFVL*PMLFIN
Trigger: ATTAATAAACAGCATGGGGCACAGGACAAAAATTTC...GCCTGTTAAGTATATATTGTGTTGCCATAACAAAGGCCTAGGAAAATTTGAAGA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CCA 90 bp TCTTCAAATTTTCCTAGGCCTTTGTTATGGCAACACAATATATACTTAACAGGCCACTTCGAGTATGAGTaGAAACAGATGTTTTATCAT +
Preference number: 4 (lower is better)
Translates to: SSNFPRPLLWQHNIYLTGHFEYE*KQMFYH
Trigger: ATGATAAAACATCTGTTTCCACTCATACTCGAAGTG...GCCTGTTAAGTATATATTGTGTTGCCATAACAAAGGCCTAGGAAAATTTGAAGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS GCA 90 bp CCCGGGAAAGGAGGCGGAGCCGCGCGAATGAATGGAGCCGGCGGCTaGTCGCTGGCGACCTCCGGCCGGTCCCAGGCCGCACAGCTCGCG +
Preference number: 5 (lower is better)
Translates to: PGKGGGAARMNGAGG*SLATSGRSQAAQLA
Trigger: CGCGAGCTGTGCGGCCTGGGACCGGCCGGAGGTCGCCAGCGAGCAGCCGCCGGCTCCATTCATTCGCGCGGCTCCGCCTCCTTTCCCGGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514200.5
CDS TCA 90 bp GGGAGCCGCTGGAAGAGCCCGGGAAAGGAGGCGGAGCCGCGCGAATaGATGGAGCCGGCGGCTGCTCGCTGGCGACCTCCGGCCGGTCCC +
Preference number: 5 (lower is better)
Translates to: GSRWKSPGKEAEPRE*MEPAAARWRPPAGP
Trigger: GGGACCGGCCGGAGGTCGCCAGCGAGCAGCCGCCGGCTCCATTCATTCGCGCGGCTCCGCCTCCTTTCCCGGGCTCTTCCAGCGGCTCCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514200.5
CDS CCA 90 bp GCCGCTGGAAGAGCCCGGGAAAGGAGGCGGAGCCGCGCGAATGAATaGAGCCGGCGGCTGCTCGCTGGCGACCTCCGGCCGGTCCCAGGC +
Preference number: 5 (lower is better)
Translates to: AAGRARERRRSRANE*SRRLLAGDLRPVPG
Trigger: GCCTGGGACCGGCCGGAGGTCGCCAGCGAGCAGCCGCCGGCTCCATTCATTCGCGCGGCTCCGCCTCCTTTCCCGGGCTCTTCCAGCGGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514200.5
CDS CCA 90 bp GGAGTTCTCCAGCCCCGCGTAGGCCCTCCTGAAATTTACCCAGAGTaGGCGCGGCCATCCCGGCCTCGGGACAGGGGTGCAGAGGGCACG +
Preference number: 5 (lower is better)
Translates to: GVLQPRVGPPEIYPE*ARPSRPRDRGAEGT
Trigger: CGTGCCCTCTGCACCCCTGTCCCGAGGCCGGGATGGCCGCGCCCACTCTGGGTAAATTTCAGGAGGGCCTACGCGGGGCTGGAGAACTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389156.9
CDS TCA 90 bp GTTCGCATAGCCCGGTGGAGTTCTCCAGCCCCGCGTAGGCCCTCCTaGAATTTACCCAGAGTGGGCGCGGCCATCCCGGCCTCGGGACAG +
Preference number: 5 (lower is better)
Translates to: VRIARWSSPAPRRPS*NLPRVGAAIPASGQ
Trigger: CTGTCCCGAGGCCGGGATGGCCGCGCCCACTCTGGGTAAATTTCAGGAGGGCCTACGCGGGGCTGGAGAACTCCACCGGGCTATGCGAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389156.9
CDS TCA 90 bp ACCCGATACGATACCCACGCCGCTTCCCAGACGCTGAAAAGCCAGTaGGATGCTTCATCCTTTCTCCCCAAGGACAGTCATGGGAGTCAG +
Preference number: 5 (lower is better)
Translates to: TRYDTHAASQTLKSQ*DASSFLPKDSHGSQ
Trigger: CTGACTCCCATGACTGTCCTTGGGGAGAAAGGATGAAGCATCTCACTGGCTTTTCAGCGTCTGGGAAGCGGCGTGGGTATCGTATCGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506954.1
CDS-3UTR CAA 90 bp TCACCATCTTGCTTCTCTTGCTGTGGCTGGGTTTCCAGTGCTGGCCGTGCATCTCTACCTCAGGGGGTTTaGAAGATTCTACCACCAGTG +
Preference number: 5 (lower is better)
Translates to: SPSCFSCCGWVSSAGRASLPQGV*KILPPV
Trigger: CACTGGTGGTAGAATCTTCAAAACCCCCTGAGGTAG...AGATGCACGGCCAGCACTGGAAACCCAGCCACAGCAAGAGAAGCAAGATGGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS TCA 90 bp CCTGTTTTAATTTACGTTAGGAACGGCTCTCCCAGCGGGGGAAGGTaGCCTGCATCAGGTGGTTATCTTCGAATCCACCCGATACGATAC +
Preference number: 5 (lower is better)
Translates to: PVLIYVRNGSPSGGR*PASGGYLRIHPIRY
Trigger: GTATCGTATCGGGTGGATTCGAAGATAACCACCTGATGCAGGTCACCTTCCCCCGCTGGGAGAGCCGTTCCTAACGTAAATTAAAACAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506954.1
CDS-3UTR CAA 90 bp TACCGCAAGCCAAGCGCATCTTCTGTAAAGGAATCAACAAAGTCCTCCAGCATGACCATCTTGCTTCTCTaGCTGTGGCTGGGTTTCCAG +
Preference number: 5 (lower is better)
Translates to: YRKPSASSVKESTKSSSMTILLL*LWLGFQ
Trigger: CTGGAAACCCAGCCACAGCAAGAGAAGCAAGATGGT...CATGCTGGAGGACTTTGTTGATTCCTTTACAGAAGATGCGCTTGGCTTGCGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS CCA 90 bp CGCTGGTACCAGTGTCCAACACCTTCAACTTCCCAAAGGAGTTCATaGTCTCCTGGATACTTCTCAAAGTATTGCTTGCAAGCTGTAGGC +
Preference number: 5 (lower is better)
Translates to: RWYQCPTPSTSQRSS*SPGYFSKYCLQAVG
Trigger: GCCTACAGCTTGCAAGCAATACTTTGAGAAGTATCCAGGAGACCATGAACTCCTTTGGGAAGTTGAAGGTGTTGGACACTGGTACCAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510496.5
CDS-3UTR CAA 90 bp TACCGCAAGCCAAGCGCATCTTCTGTAAAGGAATCAACAAAGTCCTCCAGCATGCTACCTCAGGGGGTTTaGAAGATTCTACCACCAGTG +
Preference number: 5 (lower is better)
Translates to: YRKPSASSVKESTKSSSMLPQGV*KILPPV
Trigger: CACTGGTGGTAGAATCTTCAAAACCCCCTGAGGTAG...CATGCTGGAGGACTTTGTTGATTCCTTTACAGAAGATGCGCTTGGCTTGCGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CAA 90 bp TGCTCTGGTGACTGGTATTCGCTGGTACCAGTGTCCAACACCTTCAACTTCCCAAGGCAGGAAGATCTGTaGATTGGAGAATCACTCCAT +
Preference number: 5 (lower is better)
Translates to: CSGDWYSLVPVSNTFNFPRQEDL*IGESLH
Trigger: ATGGAGTGATTCTCCAATCAACAGATCTTCCTGCCT...TGGGAAGTTGAAGGTGTTGGACACTGGTACCAGCGAATACCAGTCACCAGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CAA 90 bp CCTTTGGCCTTTCTTCTTAAATTCCGCCTGTCTACCACAGGCACTTCCACTTCTTGTAAACTGATCCAGTaGCTCGGAAGATGCTTCAGA +
Preference number: 5 (lower is better)
Translates to: PLAFLLKFRLSTTGTSTSCKLIQ*LGRCFR
Trigger: TCTGAAGCATCTTCCGAGCAACTGGATCAGTTTACA...AGAAGTGGAAGTGCCTGTGGTAGACAGGCGGAATTTAAGAAGAAAGGCCAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CAA 90 bp ATTAGAACAATACAGGGAAAATTAGCATGGCCCCTGTGCAAGGATGACACAAATACCATCTTGCTTCTCTaGCTGTGGCTGGGTTTCCAG +
Preference number: 5 (lower is better)
Translates to: IRTIQGKLAWPLCKDDTNTILLL*LWLGFQ
Trigger: CTGGAAACCCAGCCACAGCAAGAGAAGCAAGATGGT...ATTTGTGTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTGTATTGTTCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CAA 90 bp TACCGCAAGCCAAGCGCATCTTCTGTAAAGGAATCAACAAAGTCCTCCAGCATGAGCTTTTTCTGCCGATaGTGTAAACTGATCCAGTTG +
Preference number: 5 (lower is better)
Translates to: YRKPSASSVKESTKSSSMSFFCR*CKLIQL
Trigger: CAACTGGATCAGTTTACACAATCGGCAGAAAAAGCT...CATGCTGGAGGACTTTGTTGATTCCTTTACAGAAGATGCGCTTGGCTTGCGGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CAA 90 bp ATATACTTAACAGGCCAGCTTGCAACCAGTACTCAGTACAAATCAAAGGATGATACCATCTTGCTTCTCTaGCTGTGGCTGGGTTTCCAG +
Preference number: 5 (lower is better)
Translates to: IYLTGQLATSTQYKSKDDTILLL*LWLGFQ
Trigger: CTGGAAACCCAGCCACAGCAAGAGAAGCAAGATGGT...ATCATCCTTTGATTTGTACTGAGTACTGGTTGCAAGCTGGCCTGTTAAGTATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CAA 90 bp TACCGCAAGCCAAGCGCATCTTCTGTAAAGGAATCAACAAAGTCCTCCAGCATGGATGTGCTTTCTTTCTaGGAAGTAGGGACAATTTCT +
Preference number: 5 (lower is better)
Translates to: YRKPSASSVKESTKSSSMDVLSF*EVGTIS
Trigger: AGAAATTGTCCCTACTTCCAAGAAAGAAAGCACATC...CATGCTGGAGGACTTTGTTGATTCCTTTACAGAAGATGCGCTTGGCTTGCGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CAA 90 bp ATTAGAACAATACAGGGAAAATTAGCATGGCCCCTGTGCAAGGATGACACAAATGACCTTCGGAAGTGCTaGCAAAGGCATCTTTTAGAG +
Preference number: 5 (lower is better)
Translates to: IRTIQGKLAWPLCKDDTNDLRKC*QRHLLE
Trigger: CTCTAAAAGATGCCTTTGCAAGCACTTCCGAAGGTC...ATTTGTGTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTGTATTGTTCTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CAA 90 bp AGTATTAGGAGACAAATTCTCAGAGACCGGTTCTTCGGAAAATTCAGCTATCACACCGCTTTCCAATCTTaGGCCGCTTTAGATTACCAC +
Preference number: 5 (lower is better)
Translates to: SIRRQILRDRFFGKFSYHTAFQS*AALDYH
Trigger: GTGGTAATCTAAAGCGGCCAAAGATTGGAAAGCGGT...GTGATAGCTGAATTTTCCGAAGAACCGGTCTCTGAGAATTTGTCTCCTAATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CAA 90 bp ATATACTTAACAGGCCAGCTTGCAACCAGTACTCAGTACAAATCAAAGGATGATCTACCTCAGGGGGTTTaGAAGATTCTACCACCAGTG +
Preference number: 5 (lower is better)
Translates to: IYLTGQLATSTQYKSKDDLPQGV*KILPPV
Trigger: CACTGGTGGTAGAATCTTCAAAACCCCCTGAGGTAG...ATCATCCTTTGATTTGTACTGAGTACTGGTTGCAAGCTGGCCTGTTAAGTATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CAA 90 bp ATTAGAACAATACAGGGAAAATTAGCATGGCCCCTGTGCAAGGATGACACAAATCATATAGGTCTAACATaGTGGGGTGCACCTCCAAAC +
Preference number: 5 (lower is better)
Translates to: IRTIQGKLAWPLCKDDTNHIGLT*WGAPPN
Trigger: GTTTGGAGGTGCACCCCACAATGTTAGACCTATATG...ATTTGTGTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTGTATTGTTCTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CAA 90 bp ATATACTTAACAGGCCAGCTTGCAACCAGTACTCAGTACAAATCAAAGGATGATACCGCTTTCCAATCTTaGGCCGCTTTAGATTACCAC +
Preference number: 5 (lower is better)
Translates to: IYLTGQLATSTQYKSKDDTAFQS*AALDYH
Trigger: GTGGTAATCTAAAGCGGCCAAAGATTGGAAAGCGGT...ATCATCCTTTGATTTGTACTGAGTACTGGTTGCAAGCTGGCCTGTTAAGTATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CAA 90 bp CAAATAAGTTCACAAAGGACTATGTGTAATGTGACTGGACATTCAACAACTAGAACCATCTTGCTTCTCTaGCTGTGGCTGGGTTTCCAG +
Preference number: 5 (lower is better)
Translates to: QISSQRTMCNVTGHSTTRTILLL*LWLGFQ
Trigger: CTGGAAACCCAGCCACAGCAAGAGAAGCAAGATGGT...TCTAGTTGTTGAATGTCCAGTCACATTACACATAGTCCTTTGTGAACTTATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CAA 90 bp TGTCTGAACTCCCAAGATGTGCTTTCTTTCTTGGAAGTAGGGACAATTTCTCTTCAGCTATCACAGAGTTaGGAAAACCACCATCAGATC +
Preference number: 5 (lower is better)
Translates to: CLNSQDVLSFLEVGTISLQLSQS*ENHHQI
Trigger: GATCTGATGGTGGTTTTCCAAACTCTGTGATAGCTG...AAGAGAAATTGTCCCTACTTCCAAGAAAGAAAGCACATCTTGGGAGTTCAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CAA 90 bp ATTAGAACAATACAGGGAAAATTAGCATGGCCCCTGTGCAAGGATGACACAAATTGTAAACTGATCCAGTaGCTCGGAAGATGCTTCAGA +
Preference number: 5 (lower is better)
Translates to: IRTIQGKLAWPLCKDDTNCKLIQ*LGRCFR
Trigger: TCTGAAGCATCTTCCGAGCAACTGGATCAGTTTACA...ATTTGTGTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTGTATTGTTCTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CAA 90 bp ATTAGAACAATACAGGGAAAATTAGCATGGCCCCTGTGCAAGGATGACACAAATAGGCAGGAAGATCTGTaGATTGGAGAATCACTCCAT +
Preference number: 5 (lower is better)
Translates to: IRTIQGKLAWPLCKDDTNRQEDL*IGESLH
Trigger: ATGGAGTGATTCTCCAATCAACAGATCTTCCTGCCT...ATTTGTGTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTGTATTGTTCTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CAA 90 bp GTCTTCAAGTTCAACCTCTATCAAAGAACTCTGAGGAAGAGCAGTAGATGTTTCTGGCAATTGGTAACTTaGGGTAAGAAAAGAGGCACA +
Preference number: 5 (lower is better)
Translates to: VFKFNLYQRTLRKSSRCFWQLVT*GKKRGT
Trigger: TGTGCCTCTTTTCTTACCCAAAGTTACCAATTGCCA...GAAACATCTACTGCTCTTCCTCAGAGTTCTTTGATAGAGGTTGAACTTGAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CAA 90 bp CAAATAAGTTCACAAAGGACTATGTGTAATGTGACTGGACATTCAACAACTAGACTACCTCAGGGGGTTTaGAAGATTCTACCACCAGTG +
Preference number: 5 (lower is better)
Translates to: QISSQRTMCNVTGHSTTRLPQGV*KILPPV
Trigger: CACTGGTGGTAGAATCTTCAAAACCCCCTGAGGTAG...TCTAGTTGTTGAATGTCCAGTCACATTACACATAGTCCTTTGTGAACTTATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CAA 90 bp ATTAGAACAATACAGGGAAAATTAGCATGGCCCCTGTGCAAGGATGACACAAATGACATAGTAGCAACATaGTCTGAACTCCCAAGATGT +
Preference number: 5 (lower is better)
Translates to: IRTIQGKLAWPLCKDDTNDIVAT*SELPRC
Trigger: ACATCTTGGGAGTTCAGACAATGTTGCTACTATGTC...ATTTGTGTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTGTATTGTTCTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CAA 90 bp ATATACTTAACAGGCCAGCTTGCAACCAGTACTCAGTACAAATCAAAGGATGATCAGCTATCACAGAGTTaGGAAAACCACCATCAGATC +
Preference number: 5 (lower is better)
Translates to: IYLTGQLATSTQYKSKDDQLSQS*ENHHQI
Trigger: GATCTGATGGTGGTTTTCCAAACTCTGTGATAGCTG...ATCATCCTTTGATTTGTACTGAGTACTGGTTGCAAGCTGGCCTGTTAAGTATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CAA 90 bp ATATACTTAACAGGCCAGCTTGCAACCAGTACTCAGTACAAATCAAAGGATGATAGGCAGGAAGATCTGTaGATTGGAGAATCACTCCAT +
Preference number: 5 (lower is better)
Translates to: IYLTGQLATSTQYKSKDDRQEDL*IGESLH
Trigger: ATGGAGTGATTCTCCAATCAACAGATCTTCCTGCCT...ATCATCCTTTGATTTGTACTGAGTACTGGTTGCAAGCTGGCCTGTTAAGTATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CAA 90 bp ATATACTTAACAGGCCAGCTTGCAACCAGTACTCAGTACAAATCAAAGGATGATTGGCAATTGGTAACTTaGGGTAAGAAAAGAGGCACA +
Preference number: 5 (lower is better)
Translates to: IYLTGQLATSTQYKSKDDWQLVT*GKKRGT
Trigger: TGTGCCTCTTTTCTTACCCAAAGTTACCAATTGCCA...ATCATCCTTTGATTTGTACTGAGTACTGGTTGCAAGCTGGCCTGTTAAGTATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389156.9
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CAA 90 bp GGAAAACCACCATCAGATCGTTCTTCATTTGACATAGTAGCAACATTGTCTGAATGGCAATTGGTAACTTaGGGTAAGAAAAGAGGCACA +
Preference number: 5 (lower is better)
Translates to: GKPPSDRSSFDIVATLSEWQLVT*GKKRGT
Trigger: TGTGCCTCTTTTCTTACCCAAAGTTACCAATTGCCA...TTCAGACAATGTTGCTACTATGTCAAATGAAGAACGATCTGATGGTGGTTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CAA 90 bp CAAATAAGTTCACAAAGGACTATGTGTAATGTGACTGGACATTCAACAACTAGAGACCTTCGGAAGTGCTaGCAAAGGCATCTTTTAGAG +
Preference number: 5 (lower is better)
Translates to: QISSQRTMCNVTGHSTTRDLRKC*QRHLLE
Trigger: CTCTAAAAGATGCCTTTGCAAGCACTTCCGAAGGTC...TCTAGTTGTTGAATGTCCAGTCACATTACACATAGTCCTTTGTGAACTTATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CAA 90 bp CAAATAAGTTCACAAAGGACTATGTGTAATGTGACTGGACATTCAACAACTAGAACCGCTTTCCAATCTTaGGCCGCTTTAGATTACCAC +
Preference number: 5 (lower is better)
Translates to: QISSQRTMCNVTGHSTTRTAFQS*AALDYH
Trigger: GTGGTAATCTAAAGCGGCCAAAGATTGGAAAGCGGT...TCTAGTTGTTGAATGTCCAGTCACATTACACATAGTCCTTTGTGAACTTATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CAA 90 bp TGTCTGAACTCCCAAGATGTGCTTTCTTTCTTGGAAGTAGGGACAATTTCTCTTGATGTGCTTTCTTTCTaGGAAGTAGGGACAATTTCT +
Preference number: 5 (lower is better)
Translates to: CLNSQDVLSFLEVGTISLDVLSF*EVGTIS
Trigger: AGAAATTGTCCCTACTTCCAAGAAAGAAAGCACATC...AAGAGAAATTGTCCCTACTTCCAAGAAAGAAAGCACATCTTGGGAGTTCAGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CAA 90 bp ATATACTTAACAGGCCAGCTTGCAACCAGTACTCAGTACAAATCAAAGGATGATGACATAGTAGCAACATaGTCTGAACTCCCAAGATGT +
Preference number: 5 (lower is better)
Translates to: IYLTGQLATSTQYKSKDDDIVAT*SELPRC
Trigger: ACATCTTGGGAGTTCAGACAATGTTGCTACTATGTC...ATCATCCTTTGATTTGTACTGAGTACTGGTTGCAAGCTGGCCTGTTAAGTATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CAA 90 bp TCTTCAAATTTTCCTAGGCCTTTGTTATGGCAACACAATATATACTTAACAGGCCATATAGGTCTAACATaGTGGGGTGCACCTCCAAAC +
Preference number: 5 (lower is better)
Translates to: SSNFPRPLLWQHNIYLTGHIGLT*WGAPPN
Trigger: GTTTGGAGGTGCACCCCACAATGTTAGACCTATATG...GCCTGTTAAGTATATATTGTGTTGCCATAACAAAGGCCTAGGAAAATTTGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CAA 90 bp ATTAGAACAATACAGGGAAAATTAGCATGGCCCCTGTGCAAGGATGACACAAATTTCTCAAAGTATTGCTaGCAAGCTGTATACATGAGA +
Preference number: 5 (lower is better)
Translates to: IRTIQGKLAWPLCKDDTNFSKYC*QAVYMR
Trigger: TCTCATGTATACAGCTTGCAAGCAATACTTTGAGAA...ATTTGTGTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTGTATTGTTCTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389156.9
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CAA 90 bp AGTATTAGGAGACAAATTCTCAGAGACCGGTTCTTCGGAAAATTCAGCTATCACTTCTCAAAGTATTGCTaGCAAGCTGTATACATGAGA +
Preference number: 5 (lower is better)
Translates to: SIRRQILRDRFFGKFSYHFSKYC*QAVYMR
Trigger: TCTCATGTATACAGCTTGCAAGCAATACTTTGAGAA...GTGATAGCTGAATTTTCCGAAGAACCGGTCTCTGAGAATTTGTCTCCTAATACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CAA 90 bp ATTAGAACAATACAGGGAAAATTAGCATGGCCCCTGTGCAAGGATGACACAAATGCAGTAGACTCCAATTaGTTTATTGAAGCTGTAAGT +
Preference number: 5 (lower is better)
Translates to: IRTIQGKLAWPLCKDDTNAVDSN*FIEAVS
Trigger: ACTTACAGCTTCAATAAACAAATTGGAGTCTACTGC...ATTTGTGTCATCCTTGCACAGGGGCCATGCTAATTTTCCCTGTATTGTTCTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CAA 90 bp GTCTTCAAGTTCAACCTCTATCAAAGAACTCTGAGGAAGAGCAGTAGATGTTTCGCAGTAGACTCCAATTaGTTTATTGAAGCTGTAAGT +
Preference number: 5 (lower is better)
Translates to: VFKFNLYQRTLRKSSRCFAVDSN*FIEAVS
Trigger: ACTTACAGCTTCAATAAACAAATTGGAGTCTACTGC...GAAACATCTACTGCTCTTCCTCAGAGTTCTTTGATAGAGGTTGAACTTGAAGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CAA 90 bp CAAATAAGTTCACAAAGGACTATGTGTAATGTGACTGGACATTCAACAACTAGACAGCTATCACAGAGTTaGGAAAACCACCATCAGATC +
Preference number: 5 (lower is better)
Translates to: QISSQRTMCNVTGHSTTRQLSQS*ENHHQI
Trigger: GATCTGATGGTGGTTTTCCAAACTCTGTGATAGCTG...TCTAGTTGTTGAATGTCCAGTCACATTACACATAGTCCTTTGTGAACTTATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CAA 90 bp CAAATAAGTTCACAAAGGACTATGTGTAATGTGACTGGACATTCAACAACTAGATGTAAACTGATCCAGTaGCTCGGAAGATGCTTCAGA +
Preference number: 5 (lower is better)
Translates to: QISSQRTMCNVTGHSTTRCKLIQ*LGRCFR
Trigger: TCTGAAGCATCTTCCGAGCAACTGGATCAGTTTACA...TCTAGTTGTTGAATGTCCAGTCACATTACACATAGTCCTTTGTGAACTTATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CAA 90 bp ATATACTTAACAGGCCAGCTTGCAACCAGTACTCAGTACAAATCAAAGGATGATTTCTCAAAGTATTGCTaGCAAGCTGTAGGCTTAACT +
Preference number: 5 (lower is better)
Translates to: IYLTGQLATSTQYKSKDDFSKYC*QAVGLT
Trigger: AGTTAAGCCTACAGCTTGCAAGCAATACTTTGAGAA...ATCATCCTTTGATTTGTACTGAGTACTGGTTGCAAGCTGGCCTGTTAAGTATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510496.5
CDS-3UTR CAA 90 bp ATATACTTAACAGGCCAGCTTGCAACCAGTACTCAGTACAAATCAAAGGATGATCTTTTCATCTTCACCTaGAGAACTGCTAAATTCAGA +
Preference number: 5 (lower is better)
Translates to: IYLTGQLATSTQYKSKDDLFIFT*RTAKFR
Trigger: TCTGAATTTAGCAGTTCTCAAGGTGAAGATGAAAAG...ATCATCCTTTGATTTGTACTGAGTACTGGTTGCAAGCTGGCCTGTTAAGTATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CAA 90 bp ATATACTTAACAGGCCAGCTTGCAACCAGTACTCAGTACAAATCAAAGGATGATGCAGTAGACTCCAATTaGTTTATTGAAGCTGTAAGT +
Preference number: 5 (lower is better)
Translates to: IYLTGQLATSTQYKSKDDAVDSN*FIEAVS
Trigger: ACTTACAGCTTCAATAAACAAATTGGAGTCTACTGC...ATCATCCTTTGATTTGTACTGAGTACTGGTTGCAAGCTGGCCTGTTAAGTATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CAA 90 bp CAAATAAGTTCACAAAGGACTATGTGTAATGTGACTGGACATTCAACAACTAGAAGCTTTTTCTGCCGATaGTGTAAACTGATCCAGTTG +
Preference number: 5 (lower is better)
Translates to: QISSQRTMCNVTGHSTTRSFFCR*CKLIQL
Trigger: CAACTGGATCAGTTTACACAATCGGCAGAAAAAGCT...TCTAGTTGTTGAATGTCCAGTCACATTACACATAGTCCTTTGTGAACTTATTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CAA 90 bp TCTTCAAATTTTCCTAGGCCTTTGTTATGGCAACACAATATATACTTAACAGGCAGCTTTTTCTGCCGATaGTGTAAACTGATCCAGTTG +
Preference number: 5 (lower is better)
Translates to: SSNFPRPLLWQHNIYLTGSFFCR*CKLIQL
Trigger: CAACTGGATCAGTTTACACAATCGGCAGAAAAAGCT...GCCTGTTAAGTATATATTGTGTTGCCATAACAAAGGCCTAGGAAAATTTGAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CAA 90 bp TCTTCAAATTTTCCTAGGCCTTTGTTATGGCAACACAATATATACTTAACAGGCCTTTTCATCTTCACCTaGAGAACTGCTAAATTCAGA +
Preference number: 5 (lower is better)
Translates to: SSNFPRPLLWQHNIYLTGLFIFT*RTAKFR
Trigger: TCTGAATTTAGCAGTTCTCAAGGTGAAGATGAAAAG...GCCTGTTAAGTATATATTGTGTTGCCATAACAAAGGCCTAGGAAAATTTGAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS-3UTR CAA 90 bp CAAATAAGTTCACAAAGGACTATGTGTAATGTGACTGGACATTCAACAACTAGAGCAGTAGACTCCAATTaGTTTATTGAAGCTGTAAGT +
Preference number: 5 (lower is better)
Translates to: QISSQRTMCNVTGHSTTRAVDSN*FIEAVS
Trigger: ACTTACAGCTTCAATAAACAAATTGGAGTCTACTGC...TCTAGTTGTTGAATGTCCAGTCACATTACACATAGTCCTTTGTGAACTTATTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389156.9
ENST00000510496.5
ENST00000510609.5
ENST00000514215.5
CDS GCA 72 bp GGAGGCGGAGCCGCGCGAATGAATGGAGCCGGCGGCTaGTCGCTGGCGACCTCCGGCCGGTCCCAGGCCGCA +
Preference number: 6 (lower is better)
Translates to: GGGAARMNGAGG*SLATSGRSQAA
Trigger: TGCGGCCTGGGACCGGCCGGAGGTCGCCAGCGAGCAGCCGCCGGCTCCATTCATTCGCGCGGCTCCGCCTCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514200.5
CDS CCA 72 bp AGAGCCCGGGAAAGGAGGCGGAGCCGCGCGAATGAATaGAGCCGGCGGCTGCTCGCTGGCGACCTCCGGCCG +
Preference number: 6 (lower is better)
Translates to: RARERRRSRANE*SRRLLAGDLRP
Trigger: CGGCCGGAGGTCGCCAGCGAGCAGCCGCCGGCTCCATTCATTCGCGCGGCTCCGCCTCCTTTCCCGGGCTCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510609.5
ENST00000514200.5
CDS TCA 72 bp GCCCGGTGGAGTTCTCCAGCCCCGCGTAGGCCCTCCTaGAATTTACCCAGAGTGGGCGCGGCCATCCCGGCC +
Preference number: 6 (lower is better)
Translates to: ARWSSPAPRRPS*NLPRVGAAIPA
Trigger: GGCCGGGATGGCCGCGCCCACTCTGGGTAAATTTCAGGAGGGCCTACGCGGGGCTGGAGAACTCCACCGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389156.9
CDS CCA 72 bp CAGCCCCGCGTAGGCCCTCCTGAAATTTACCCAGAGTaGGCGCGGCCATCCCGGCCTCGGGACAGGGGTGCA +
Preference number: 6 (lower is better)
Translates to: QPRVGPPEIYPE*ARPSRPRDRGA
Trigger: TGCACCCCTGTCCCGAGGCCGGGATGGCCGCGCCCACTCTGGGTAAATTTCAGGAGGGCCTACGCGGGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389156.9
CDS CCA 72 bp CGGCTCTCCCAGCGGGGGAAGGTGACCTGCATCAGGTaGTTATCTTCGAATCCACCCGATACGATACCCACG +
Preference number: 6 (lower is better)
Translates to: RLSQRGKVTCIR*LSSNPPDTIPT
Trigger: CGTGGGTATCGTATCGGGTGGATTCGAAGATAACCACCTGATGCAGGTCACCTTCCCCCGCTGGGAGAGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506954.1
CDS TCA 72 bp CCACCCGATACGATACCCACGCCGCTTCCCAGACGCTaGAAAGCCAGTGAGATGCTTCATCCTTTCTCCCCA +
Preference number: 6 (lower is better)
Translates to: PPDTIPTPLPRR*KASEMLHPFSP
Trigger: TGGGGAGAAAGGATGAAGCATCTCACTGGCTTTTCAGCGTCTGGGAAGCGGCGTGGGTATCGTATCGGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506954.1
CDS TCA 72 bp ATTTACGTTAGGAACGGCTCTCCCAGCGGGGGAAGGTaGCCTGCATCAGGTGGTTATCTTCGAATCCACCCG +
Preference number: 6 (lower is better)
Translates to: IYVRNGSPSGGR*PASGGYLRIHP
Trigger: CGGGTGGATTCGAAGATAACCACCTGATGCAGGTCACCTTCCCCCGCTGGGAGAGCCGTTCCTAACGTAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506954.1
CDS TCA 72 bp GATACCCACGCCGCTTCCCAGACGCTGAAAAGCCAGTaGGATGCTTCATCCTTTCTCCCCAAGGACAGTCAT +
Preference number: 6 (lower is better)
Translates to: DTHAASQTLKSQ*DASSFLPKDSH
Trigger: ATGACTGTCCTTGGGGAGAAAGGATGAAGCATCTCACTGGCTTTTCAGCGTCTGGGAAGCGGCGTGGGTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506954.1
CDS TCA 72 bp AGCCATAAACCACCCAGGGTTCAAGGCTTCACCTCCTaGGGCACAGGCCTCTTGAAAAATGGCATAATGGAG +
Preference number: 6 (lower is better)
Translates to: SHKPPRVQGFTS*GTGLLKNGIME
Trigger: CTCCATTATGCCATTTTTCAAGAGGCCTGTGCCTCAGGAGGTGAAGCCTTGAACCCTGGGTGGTTTATGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506954.1