RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM168B (Homo sapiens)

Ensembl gene IDs: ENSG00000152102

Ensembl transcript IDs: ENST00000389915.4, ENST00000409185.5

Found 452 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCACCCACCTCAAGCCACACCCCTGCCACCTGCTGCTGCGCCCAATaGAGGTCCTGTCCTGTCCGGGCAACAGCCAAACTGGCGACAATG +
Preference number: 1 (lower is better)
Translates to: PPTSSHTPATCCCAQ*RSCPVRATAKLATM
Trigger: CATTGTCGCCAGTTTGGCTGTTGCCCGGACAGGACAGGACCTCCATTGGGCGCAGCAGCAGGTGGCAGGGGTGTGGCTTGAGGTGGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR TCA 90 bp CCTTGCCCACTGGTCTGCACAGGGACTCATGGGCACAGCCTGTGGTaGGGAGGAGACACCTGTCATGCCAGTCCTGGGAGCACACCACCC +
Preference number: 1 (lower is better)
Translates to: PCPLVCTGTHGHSLW*GGDTCHASPGSTPP
Trigger: GGGTGGTGTGCTCCCAGGACTGGCATGACAGGTGTCTCCTCCTCACCACAGGCTGTGCCCATGAGTCCCTGTGCAGACCAGTGGGCAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR CCA 90 bp AGCACAAACGGCTGGCCTGAGATCTGGCCCAGCTGCCTTGCCCACTaGTCTGCACAGGGACTCATGGGCACAGCCTGTGGTGAGGAGGAG +
Preference number: 1 (lower is better)
Translates to: STNGWPEIWPSCLAH*SAQGLMGTACGEEE
Trigger: CTCCTCCTCACCACAGGCTGTGCCCATGAGTCCCTGTGCAGACCAGTGGGCAAGGCAGCTGGGCCAGATCTCAGGCCAGCCGTTTGTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR CCA 90 bp CAGCACAGCAACCCTGCTAGGAGCACAAACGGCTGGCCTGAGATCTaGCCCAGCTGCCTTGCCCACTGGTCTGCACAGGGACTCATGGGC +
Preference number: 1 (lower is better)
Translates to: QHSNPARSTNGWPEI*PSCLAHWSAQGLMG
Trigger: GCCCATGAGTCCCTGTGCAGACCAGTGGGCAAGGCAGCTGGGCCAGATCTCAGGCCAGCCGTTTGTGCTCCTAGCAGGGTTGCTGTGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR GCA 90 bp AACCCTGCTAGGAGCACAAACGGCTGGCCTGAGATCTGGCCCAGCTaGCTTGCCCACTGGTCTGCACAGGGACTCATGGGCACAGCCTGT +
Preference number: 1 (lower is better)
Translates to: NPARSTNGWPEIWPS*LAHWSAQGLMGTAC
Trigger: ACAGGCTGTGCCCATGAGTCCCTGTGCAGACCAGTGGGCAAGGCAGCTGGGCCAGATCTCAGGCCAGCCGTTTGTGCTCCTAGCAGGGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR CCA 90 bp AGATCTGGCCCAGCTGCCTTGCCCACTGGTCTGCACAGGGACTCATaGGCACAGCCTGTGGTGAGGAGGAGACACCTGTCATGCCAGTCC +
Preference number: 1 (lower is better)
Translates to: RSGPAALPTGLHRDS*AQPVVRRRHLSCQS
Trigger: GGACTGGCATGACAGGTGTCTCCTCCTCACCACAGGCTGTGCCCATGAGTCCCTGTGCAGACCAGTGGGCAAGGCAGCTGGGCCAGATCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR TCA 90 bp AGGCCGCTGAAAGGGACCCAGGCCTTACATCCCCCACCCCCACTCTaGCCCTCACTGAGAACCGACATGCACTCTCATGGATACAGGACG +
Preference number: 1 (lower is better)
Translates to: RPLKGTQALHPPPPL*PSLRTDMHSHGYRT
Trigger: CGTCCTGTATCCATGAGAGTGCATGTCGGTTCTCAGTGAGGGTCAGAGTGGGGGTGGGGGATGTAAGGCCTGGGTCCCTTTCAGCGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR GCA 90 bp GCACTGCCTGGCCCTCTCTGCTGTCTGTGCTTGCTTTGTGCCAAGTaGCCTCAGCTGCAAAAGAGATGGCAGGAGAGGCTCGCAGACAAC +
Preference number: 1 (lower is better)
Translates to: ALPGPLCCLCLLCAK*PQLQKRWQERLADN
Trigger: GTTGTCTGCGAGCCTCTCCTGCCATCTCTTTTGCAGCTGAGGGCACTTGGCACAAAGCAAGCACAGACAGCAGAGAGGGCCAGGCAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR GCA 90 bp GCCCTCTCTGCTGTCTGTGCTTGCTTTGTGCCAAGTGCCCTCAGCTaGAAAAGAGATGGCAGGAGAGGCTCGCAGACAACAGACACTGGC +
Preference number: 1 (lower is better)
Translates to: ALSAVCACFVPSALS*KRDGRRGSQTTDTG
Trigger: GCCAGTGTCTGTTGTCTGCGAGCCTCTCCTGCCATCTCTTTTGCAGCTGAGGGCACTTGGCACAAAGCAAGCACAGACAGCAGAGAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR TCA 90 bp AAAAGGTTCTGGAAGTGCCTTCAGGCCCATTACCATGACTGGCCCTaGCTCTGGCCCTCACAGAGCGGCAAGTTCATGGGTCACTGGCTC +
Preference number: 1 (lower is better)
Translates to: KRFWKCLQAHYHDWP*LWPSQSGKFMGHWL
Trigger: GAGCCAGTGACCCATGAACTTGCCGCTCTGTGAGGGCCAGAGTCAGGGCCAGTCATGGTAATGGGCCTGAAGGCACTTCCAGAACCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR GCA 90 bp ATAAACCCTGCCAGCAAACGCACTCCAGCACTGCCTGGCCCTCTCTaGTGTCTGTGCTTGCTTTGTGCCAAGTGCCCTCAGCTGCAAAAG +
Preference number: 1 (lower is better)
Translates to: INPASKRTPALPGPL*CLCLLCAKCPQLQK
Trigger: CTTTTGCAGCTGAGGGCACTTGGCACAAAGCAAGCACAGACAGCAGAGAGGGCCAGGCAGTGCTGGAGTGCGTTTGCTGGCAGGGTTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR GCA 90 bp AGGGGAGAAATACGTGCTCTGCCTTCCCCCAGGCCAACCACACTCTaGTTTAGAGACCCTCTCAGAAAGCACCAGAGAGGAGGACCAGAC +
Preference number: 1 (lower is better)
Translates to: RGEIRALPSPRPTTL*FRDPLRKHQRGGPD
Trigger: GTCTGGTCCTCCTCTCTGGTGCTTTCTGAGAGGGTCTCTAAAGCAGAGTGTGGTTGGCCTGGGGGAAGGCAGAGCACGTATTTCTCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR CCA 90 bp GCGTCCCCTCCAGCCGGCCTCAGCAGACAAGTCACCACCATCAGGTaGGTGATCCCAGAAGCAGCTACAGGTTTCTACATTTCCAGACAT +
Preference number: 1 (lower is better)
Translates to: ASPPAGLSRQVTTIR*VIPEAATGFYISRH
Trigger: ATGTCTGGAAATGTAGAAACCTGTAGCTGCTTCTGGGATCACCCACCTGATGGTGGTGACTTGTCTGCTGAGGCCGGCTGGAGGGGACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR TCA 90 bp CCTGTTCCACTGACTCCACCAAGCCTAAACTCAAAGGGATGTCCATaGACCAGCTGCACCCAAGCAGCTGTGGCTTCCCTACTCTCTCCC +
Preference number: 1 (lower is better)
Translates to: PVPLTPPSLNSKGCP*TSCTQAAVASLLSP
Trigger: GGGAGAGAGTAGGGAAGCCACAGCTGCTTGGGTGCAGCTGGTTCATGGACATCCCTTTGAGTTTAGGCTTGGTGGAGTCAGTGGAACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR TCA 90 bp CCCCTCCAGCCGGCCTCAGCAGACAAGTCACCACCATCAGGTGGGTaGTCCCAGAAGCAGCTACAGGTTTCTACATTTCCAGACATATCC +
Preference number: 1 (lower is better)
Translates to: PLQPASADKSPPSGG*SQKQLQVSTFPDIS
Trigger: GGATATGTCTGGAAATGTAGAAACCTGTAGCTGCTTCTGGGATCACCCACCTGATGGTGGTGACTTGTCTGCTGAGGCCGGCTGGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR TCA 90 bp AAGGGACCCAGGCCTTACATCCCCCACCCCCACTCTGACCCTCACTaGGAACCGACATGCACTCTCATGGATACAGGACGGGCATATTTT +
Preference number: 1 (lower is better)
Translates to: KGPRPYIPHPHSDPH*EPTCTLMDTGRAYF
Trigger: AAAATATGCCCGTCCTGTATCCATGAGAGTGCATGTCGGTTCTCAGTGAGGGTCAGAGTGGGGGTGGGGGATGTAAGGCCTGGGTCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR TCA 90 bp GGTCCCTACACAGACGCCGCTCATCCTCTGTCTCCCCTTCCCAAGTaGCTTCACTTCAGTCCTGTGGACCAAGATAAGGCTATCCCCACA +
Preference number: 1 (lower is better)
Translates to: GPYTDAAHPLSPLPK*LHFSPVDQDKAIPT
Trigger: TGTGGGGATAGCCTTATCTTGGTCCACAGGACTGAAGTGAAGTCACTTGGGAAGGGGAGACAGAGGATGAGCGGCGTCTGTGTAGGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR GCA 90 bp GCCCTCACAGAGCGGCAAGTTCATGGGTCACTGGCTCACACTAAATaGTCAGCCGCCAGCACAGATCCAAACAAGACCTCCATGAGCAGA +
Preference number: 1 (lower is better)
Translates to: ALTERQVHGSLAHTK*SAASTDPNKTSMSR
Trigger: TCTGCTCATGGAGGTCTTGTTTGGATCTGTGCTGGCGGCTGAGCATTTAGTGTGAGCCAGTGACCCATGAACTTGCCGCTCTGTGAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR TCA 90 bp ACACTAAATGCTCAGCCGCCAGCACAGATCCAAACAAGACCTCCATaGGCAGAGAAACTGCAGCGGCTGAACACACTCCCCAAGCCTCAG +
Preference number: 1 (lower is better)
Translates to: TLNAQPPAQIQTRPP*AEKLQRLNTLPKPQ
Trigger: CTGAGGCTTGGGGAGTGTGTTCAGCCGCTGCAGTTTCTCTGCTCATGGAGGTCTTGTTTGGATCTGTGCTGGCGGCTGAGCATTTAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR CCA 90 bp GTCCACAAAACAGAATTTGCTTTAAGACCAACCCACAGAGTCAGCTaGAGACTAACGGCGCTGGGGCCTGCTGGGCCGGGATATAGTCGT +
Preference number: 1 (lower is better)
Translates to: VHKTEFALRPTHRVS*RLTALGPAGPGYSR
Trigger: ACGACTATATCCCGGCCCAGCAGGCCCCAGCGCCGTTAGTCTCCAGCTGACTCTGTGGGTTGGTCTTAAAGCAAATTCTGTTTTGTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR GCA 90 bp CAAGAGTCTGCTGCCCTTCAGAAAGCCAGAGGGAACACTCACAAATaGAGAGGTACTAGAGGGGAGAAATACGTGCTCTGCCTTCCCCCA +
Preference number: 1 (lower is better)
Translates to: QESAALQKARGNTHK*RGTRGEKYVLCLPP
Trigger: TGGGGGAAGGCAGAGCACGTATTTCTCCCCTCTAGTACCTCTGCATTTGTGAGTGTTCCCTCTGGCTTTCTGAAGGGCAGCAGACTCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR GCA 90 bp TTGAGCCCCTGGAGCCCTCAGGACCTACTGATAAAGCATGTCCTCTaGAGTATACTCAAGAGTCTGCTGCCCTTCAGAAAGCCAGAGGGA +
Preference number: 1 (lower is better)
Translates to: LSPWSPQDLLIKHVL*SILKSLLPFRKPEG
Trigger: TCCCTCTGGCTTTCTGAAGGGCAGCAGACTCTTGAGTATACTGCAGAGGACATGCTTTATCAGTAGGTCCTGAGGGCTCCAGGGGCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR TCA 90 bp CACAGATCCAAACAAGACCTCCATGAGCAGAGAAACTGCAGCGGCTaGACACACTCCCCAAGCCTCAGGGGAGAAGGTGTAGAACAAATA +
Preference number: 1 (lower is better)
Translates to: HRSKQDLHEQRNCSG*THSPSLRGEGVEQI
Trigger: TATTTGTTCTACACCTTCTCCCCTGAGGCTTGGGGAGTGTGTTCAGCCGCTGCAGTTTCTCTGCTCATGGAGGTCTTGTTTGGATCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR GCA 90 bp CCCTACTCTCTCCCAAACCTCGCAACTCCCTCCCAGGACAGTCAGTaGCAAAGAAACAGGTCGCTGAAAACTAAAATGTCCACATCCCTA +
Preference number: 1 (lower is better)
Translates to: PYSLPNLATPSQDSQ*QRNRSLKTKMSTSL
Trigger: TAGGGATGTGGACATTTTAGTTTTCAGCGACCTGTTTCTTTGGCACTGACTGTCCTGGGAGGGAGTTGCGAGGTTTGGGAGAGAGTAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR CCA 90 bp CTCATCCTCTGTCTCCCCTTCCCAAGTGACTTCACTTCAGTCCTGTaGACCAAGATAAGGCTATCCCCACAGGCTCTCTCTTCTTCAAAT +
Preference number: 1 (lower is better)
Translates to: LILCLPFPSDFTSVL*TKIRLSPQALSSSN
Trigger: ATTTGAAGAAGAGAGAGCCTGTGGGGATAGCCTTATCTTGGTCCACAGGACTGAAGTGAAGTCACTTGGGAAGGGGAGACAGAGGATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR TCA 90 bp TCCTGCCAACCATCCACTAAACAGATGGAATTACCAACAGAGACTTaGAGAAAGGGGCACAAACTGTGTGCCTGCGGTAAATGTCTGCCC +
Preference number: 1 (lower is better)
Translates to: SCQPSTKQMELPTET*RKGHKLCACGKCLP
Trigger: GGGCAGACATTTACCGCAGGCACACAGTTTGTGCCCCTTTCTTCAAGTCTCTGTTGGTAATTCCATCTGTTTAGTGGATGGTTGGCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR CCA 90 bp ACAGGTAGGCCTACAAACCACACCAAGAAGAACGTTCTTAACAGATaGCTCACGAGAGACATAAAAGGTTCTGGAAGTGCCTTCAGGCCC +
Preference number: 1 (lower is better)
Translates to: TGRPTNHTKKNVLNR*LTRDIKGSGSAFRP
Trigger: GGGCCTGAAGGCACTTCCAGAACCTTTTATGTCTCTCGTGAGCCATCTGTTAAGAACGTTCTTCTTGGTGTGGTTTGTAGGCCTACCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR CCA 90 bp GAACCGTTAGAACCTACTAATCCTGCCAACCATCCACTAAACAGATaGAATTACCAACAGAGACTTGAAGAAAGGGGCACAAACTGTGTG +
Preference number: 1 (lower is better)
Translates to: EPLEPTNPANHPLNR*NYQQRLEERGTNCV
Trigger: CACACAGTTTGTGCCCCTTTCTTCAAGTCTCTGTTGGTAATTCCATCTGTTTAGTGGATGGTTGGCAGGATTAGTAGGTTCTAACGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR TCA 90 bp TGGCCCAGCTGCCTTGCCCACTGGTCTGCACAGGGACTCATGGGCACAGCCTGTTGCCCTAGAGGCCGCTaGAAGGGACCCAGGCCTTAC +
Preference number: 2 (lower is better)
Translates to: WPSCLAHWSAQGLMGTACCPRGR*KGPRPY
Trigger: GTAAGGCCTGGGTCCCTTTCAGCGGCCTCTAGGGCA...ACAGGCTGTGCCCATGAGTCCCTGTGCAGACCAGTGGGCAAGGCAGCTGGGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR TCA 90 bp TGGCCCAGCTGCCTTGCCCACTGGTCTGCACAGGGACTCATGGGCACAGCCTGTTACCATGACTGGCCCTaGCTCTGGCCCTCACAGAGC +
Preference number: 2 (lower is better)
Translates to: WPSCLAHWSAQGLMGTACYHDWP*LWPSQS
Trigger: GCTCTGTGAGGGCCAGAGTCAGGGCCAGTCATGGTA...ACAGGCTGTGCCCATGAGTCCCTGTGCAGACCAGTGGGCAAGGCAGCTGGGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR TCA 90 bp TGGCCCAGCTGCCTTGCCCACTGGTCTGCACAGGGACTCATGGGCACAGCCTGTTCAGGCCCATTACCATaGCTGGCCCTGACTCTGGCC +
Preference number: 2 (lower is better)
Translates to: WPSCLAHWSAQGLMGTACSGPLP*LALTLA
Trigger: GGCCAGAGTCAGGGCCAGTCATGGTAATGGGCCTGA...ACAGGCTGTGCCCATGAGTCCCTGTGCAGACCAGTGGGCAAGGCAGCTGGGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR CCA 90 bp CTCAAACCACCACTGCACTGGGAAGAAGACGCACGCTCCTGCCCTAGAGGCCGCACCCACAGAGTCAGCTaGAGACTAACGGCGCTGGGG +
Preference number: 2 (lower is better)
Translates to: LKPPLHWEEDARSCPRGRTHRVS*RLTALG
Trigger: CCCCAGCGCCGTTAGTCTCCAGCTGACTCTGTGGGT...GCGGCCTCTAGGGCAGGAGCGTGCGTCTTCTTCCCAGTGCAGTGGTGGTTTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR TCA 90 bp TGGCCCAGCTGCCTTGCCCACTGGTCTGCACAGGGACTCATGGGCACAGCCTGTAGCTGTCGGATAAGGTaGAGGTGGCCCAACTGCTCA +
Preference number: 2 (lower is better)
Translates to: WPSCLAHWSAQGLMGTACSCRIR*RWPNCS
Trigger: TGAGCAGTTGGGCCACCTTCACCTTATCCGACAGCT...ACAGGCTGTGCCCATGAGTCCCTGTGCAGACCAGTGGGCAAGGCAGCTGGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR CCA 90 bp CCAGAGCCCACAGCACTCAAACCACCACTGCACTGGGAAGAAGACGCACGCTCCCACTCCAGCACTGCCTaGCCCTCTCTGCTGTCTGTG +
Preference number: 2 (lower is better)
Translates to: PEPTALKPPLHWEEDARSHSSTA*PSLLSV
Trigger: CACAGACAGCAGAGAGGGCCAGGCAGTGCTGGAGTG...GGAGCGTGCGTCTTCTTCCCAGTGCAGTGGTGGTTTGAGTGCTGTGGGCTCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR TCA 90 bp TGGCCCAGCTGCCTTGCCCACTGGTCTGCACAGGGACTCATGGGCACAGCCTGTCAAACAAGACCTCCATaGGCAGAGAAACTGCAGCGG +
Preference number: 2 (lower is better)
Translates to: WPSCLAHWSAQGLMGTACQTRPP*AEKLQR
Trigger: CCGCTGCAGTTTCTCTGCTCATGGAGGTCTTGTTTG...ACAGGCTGTGCCCATGAGTCCCTGTGCAGACCAGTGGGCAAGGCAGCTGGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR GCA 90 bp TGGCCCAGCTGCCTTGCCCACTGGTCTGCACAGGGACTCATGGGCACAGCCTGTTCCCAGGACAGTCAGTaGCAAAGAAACAGGTCGCTG +
Preference number: 2 (lower is better)
Translates to: WPSCLAHWSAQGLMGTACSQDSQ*QRNRSL
Trigger: CAGCGACCTGTTTCTTTGGCACTGACTGTCCTGGGA...ACAGGCTGTGCCCATGAGTCCCTGTGCAGACCAGTGGGCAAGGCAGCTGGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR GCA 90 bp CCTGCTGCTGCGCCCAATGGAGGTCCTGTCCTGTCCGGGCAACAGCCAAACTGGTCCCAGGACAGTCAGTaGCAAAGAAACAGGTCGCTG +
Preference number: 2 (lower is better)
Translates to: PAAAPNGGPVLSGQQPNWSQDSQ*QRNRSL
Trigger: CAGCGACCTGTTTCTTTGGCACTGACTGTCCTGGGA...CCAGTTTGGCTGTTGCCCGGACAGGACAGGACCTCCATTGGGCGCAGCAGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR GCA 90 bp TGGCCCAGCTGCCTTGCCCACTGGTCTGCACAGGGACTCATGGGCACAGCCTGTCCTCTCTGCTGTCTGTaGTTGCTTTGTGCCAAGTGC +
Preference number: 2 (lower is better)
Translates to: WPSCLAHWSAQGLMGTACPLCCL*LLCAKC
Trigger: GCACTTGGCACAAAGCAAGCACAGACAGCAGAGAGG...ACAGGCTGTGCCCATGAGTCCCTGTGCAGACCAGTGGGCAAGGCAGCTGGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR GCA 90 bp CTCAAACCACCACTGCACTGGGAAGAAGACGCACGCTCCTGCCCTAGAGGCCGCCTGCCTGGCCCTCTCTaGTGTCTGTGCTTGCTTTGT +
Preference number: 2 (lower is better)
Translates to: LKPPLHWEEDARSCPRGRLPGPL*CLCLLC
Trigger: ACAAAGCAAGCACAGACAGCAGAGAGGGCCAGGCAG...GCGGCCTCTAGGGCAGGAGCGTGCGTCTTCTTCCCAGTGCAGTGGTGGTTTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR GCA 90 bp CACCAGAAAGAGCAAGGTACTGTATGCCCAGCTGGGGAAGGGCAAGACACTCACCTCACTGGGCGCCAGTaGCCTGACCCAGCTACCAGC +
Preference number: 2 (lower is better)
Translates to: HQKEQGTVCPAGEGQDTHLTGRQ*PDPATS
Trigger: GCTGGTAGCTGGGTCAGGGCACTGGCGCCCAGTGAG...GTGAGTGTCTTGCCCTTCCCCAGCTGGGCATACAGTACCTTGCTCTTTCTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR GCA 90 bp CCTGCTGCTGCGCCCAATGGAGGTCCTGTCCTGTCCGGGCAACAGCCAAACTGGCTGGCTCACACTAAATaGTCAGCCGCCAGCACAGAT +
Preference number: 2 (lower is better)
Translates to: PAAAPNGGPVLSGQQPNWLAHTK*SAASTD
Trigger: ATCTGTGCTGGCGGCTGAGCATTTAGTGTGAGCCAG...CCAGTTTGGCTGTTGCCCGGACAGGACAGGACCTCCATTGGGCGCAGCAGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR CAA 90 bp ACGCACTCCAGCACTGCCTGGCCCTCTCTGCTGTCTGTGCTTGCTTaGTGCCAAGTGCCCTCAGCTGCAAAAGAGATGGCAGGAGAGGCT +
Preference number: 2 (lower is better)
Translates to: THSSTAWPSLLSVLA*CQVPSAAKEMAGEA
Trigger: AGCCTCTCCTGCCATCTCTTTTGCAGCTGAGGGCACTTGGCACAAAGCAAGCACAGACAGCAGAGAGGGCCAGGCAGTGCTGGAGTGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR TCA 90 bp CTCAAACCACCACTGCACTGGGAAGAAGACGCACGCTCCTGCCCTAGAGGCCGCTCAAAGGGATGTCCATaGACCAGCTGCACCCAAGCA +
Preference number: 2 (lower is better)
Translates to: LKPPLHWEEDARSCPRGRSKGCP*TSCTQA
Trigger: TGCTTGGGTGCAGCTGGTTCATGGACATCCCTTTGA...GCGGCCTCTAGGGCAGGAGCGTGCGTCTTCTTCCCAGTGCAGTGGTGGTTTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR TCA 90 bp CACCAGAAAGAGCAAGGTACTGTATGCCCAGCTGGGGAAGGGCAAGACACTCACTGCCCTAGAGGCCGCTaGAAGGGACCCAGGCCTTAC +
Preference number: 2 (lower is better)
Translates to: HQKEQGTVCPAGEGQDTHCPRGR*KGPRPY
Trigger: GTAAGGCCTGGGTCCCTTTCAGCGGCCTCTAGGGCA...GTGAGTGTCTTGCCCTTCCCCAGCTGGGCATACAGTACCTTGCTCTTTCTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR GCA 90 bp CTCAAACCACCACTGCACTGGGAAGAAGACGCACGCTCCTGCCCTAGAGGCCGCTCCCACAATAAACCCTaGCAGCAAACGCACTCCAGC +
Preference number: 2 (lower is better)
Translates to: LKPPLHWEEDARSCPRGRSHNKP*QQTHSS
Trigger: GCTGGAGTGCGTTTGCTGGCAGGGTTTATTGTGGGA...GCGGCCTCTAGGGCAGGAGCGTGCGTCTTCTTCCCAGTGCAGTGGTGGTTTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR GCA 90 bp CCTGCTGCTGCGCCCAATGGAGGTCCTGTCCTGTCCGGGCAACAGCCAAACTGGACACCATCCTGTGTGTaGCAAGTACCAAGCAAGCCT +
Preference number: 2 (lower is better)
Translates to: PAAAPNGGPVLSGQQPNWTPSCV*QVPSKP
Trigger: AGGCTTGCTTGGTACTTGGCACACACAGGATGGTGT...CCAGTTTGGCTGTTGCCCGGACAGGACAGGACCTCCATTGGGCGCAGCAGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR GCA 90 bp CAGCACTCACTGGCACTCACAGGTGCCTTACATACCTTACGGGGGCCAACACTGCACTCACTGACCAGGTaGCCACCCCAAGGCTCAGGA +
Preference number: 2 (lower is better)
Translates to: QHSLALTGALHTLRGPTLHSLTR*PPQGSG
Trigger: TCCTGAGCCTTGGGGTGGGCACCTGGTCAGTGAGTG...CAGTGTTGGCCCCCGTAAGGTATGTAAGGCACCTGTGAGTGCCAGTGAGTGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR TCA 90 bp TGGCCCAGCTGCCTTGCCCACTGGTCTGCACAGGGACTCATGGGCACAGCCTGTTTCATCACAGCCAGATaGTGCCACCAGAAAGAGCAA +
Preference number: 2 (lower is better)
Translates to: WPSCLAHWSAQGLMGTACFITAR*CHQKEQ
Trigger: TTGCTCTTTCTGGTGGCATCATCTGGCTGTGATGAA...ACAGGCTGTGCCCATGAGTCCCTGTGCAGACCAGTGGGCAAGGCAGCTGGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR CCA 90 bp AGAAAGGGGCACAAACTGTGTGCCTGCGGTAAATGTCTGCCCCCACACATAGACGCAGACAACAGACACTaGCCTCCCCCTCGCCCCATC +
Preference number: 2 (lower is better)
Translates to: RKGHKLCACGKCLPPHIDADNRH*PPPRPI
Trigger: GATGGGGCGAGGGGGAGGCCAGTGTCTGTTGTCTGC...GTCTATGTGTGGGGGCAGACATTTACCGCAGGCACACAGTTTGTGCCCCTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR CCA 90 bp CCTGCTGCTGCGCCCAATGGAGGTCCTGTCCTGTCCGGGCAACAGCCAAACTGGCGACATGCACTCTCATaGATACAGGACGGGCATATT +
Preference number: 2 (lower is better)
Translates to: PAAAPNGGPVLSGQQPNWRHALS*IQDGHI
Trigger: AATATGCCCGTCCTGTATCCATGAGAGTGCATGTCG...CCAGTTTGGCTGTTGCCCGGACAGGACAGGACCTCCATTGGGCGCAGCAGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR CCA 90 bp ACTCTGGCCCTCACAGAGCGGCAAGTTCATGGGTCACTGGCTCACACTAAATGCCCCCCACCAACCAACTaGGGCAGAATGCTAGTGGGC +
Preference number: 2 (lower is better)
Translates to: TLALTERQVHGSLAHTKCPPPTN*GRMLVG
Trigger: GCCCACTAGCATTCTGCCCCAGTTGGTTGGTGGGGG...GCATTTAGTGTGAGCCAGTGACCCATGAACTTGCCGCTCTGTGAGGGCCAGAGT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR CCA 90 bp TGGCCCAGCTGCCTTGCCCACTGGTCTGCACAGGGACTCATGGGCACAGCCTGTAACTTCTGTGTTACTTaGTCAGTTGAGCCCCTGGAG +
Preference number: 2 (lower is better)
Translates to: WPSCLAHWSAQGLMGTACNFCVT*SVEPLE
Trigger: CTCCAGGGGCTCAACTGACCAAGTAACACAGAAGTT...ACAGGCTGTGCCCATGAGTCCCTGTGCAGACCAGTGGGCAAGGCAGCTGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR TCA 90 bp CAGCACTCACTGGCACTCACAGGTGCCTTACATACCTTACGGGGGCCAACACTGCACTCTGACCCTCACTaGGAACCGACATGCACTCTC +
Preference number: 2 (lower is better)
Translates to: QHSLALTGALHTLRGPTLHSDPH*EPTCTL
Trigger: GAGAGTGCATGTCGGTTCTCAGTGAGGGTCAGAGTG...CAGTGTTGGCCCCCGTAAGGTATGTAAGGCACCTGTGAGTGCCAGTGAGTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR TCA 90 bp TTGAGCCCCTGGAGCCCTCAGGACCTACTGATAAAGCATGTCCTCTGCAGTATATGGGCGCCAGTGCCCTaGCCCAGCTACCAGCAAATG +
Preference number: 2 (lower is better)
Translates to: LSPWSPQDLLIKHVLCSIWAPVP*PSYQQM
Trigger: CATTTGCTGGTAGCTGGGTCAGGGCACTGGCGCCCA...TATACTGCAGAGGACATGCTTTATCAGTAGGTCCTGAGGGCTCCAGGGGCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR GCA 90 bp CAGCACTCACTGGCACTCACAGGTGCCTTACATACCTTACGGGGGCCAACACTGGAGCAAGGTACTGTATaGCCAGCTGGGGAAGGGCAA +
Preference number: 2 (lower is better)
Translates to: QHSLALTGALHTLRGPTLEQGTV*PAGEGQ
Trigger: TTGCCCTTCCCCAGCTGGGCATACAGTACCTTGCTC...CAGTGTTGGCCCCCGTAAGGTATGTAAGGCACCTGTGAGTGCCAGTGAGTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR CCA 90 bp GAGCGGCAAGTTCATGGGTCACTGGCTCACACTAAATGCTCAGCCGCCAGCACAGTCACCACCATCAGGTaGGTGATCCCAGAAGCAGCT +
Preference number: 2 (lower is better)
Translates to: ERQVHGSLAHTKCSAASTVTTIR*VIPEAA
Trigger: AGCTGCTTCTGGGATCACCCACCTGATGGTGGTGAC...TGTGCTGGCGGCTGAGCATTTAGTGTGAGCCAGTGACCCATGAACTTGCCGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR CCA 90 bp GAGCGGCAAGTTCATGGGTCACTGGCTCACACTAAATGCTCAGCCGCCAGCACAGATGTAAATGGCGTGTaGGGGGTGCAGCCCACTCTT +
Preference number: 2 (lower is better)
Translates to: ERQVHGSLAHTKCSAASTDVNGV*GVQPTL
Trigger: AAGAGTGGGCTGCACCCCCCACACGCCATTTACATC...TGTGCTGGCGGCTGAGCATTTAGTGTGAGCCAGTGACCCATGAACTTGCCGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR TCA 90 bp CCTGCTGCTGCGCCCAATGGAGGTCCTGTCCTGTCCGGGCAACAGCCAAACTGGTCACTGCAGGTAGATTaGGCAAGCTTTTTGTGTTTG +
Preference number: 2 (lower is better)
Translates to: PAAAPNGGPVLSGQQPNWSLQVD*ASFLCL
Trigger: CAAACACAAAAAGCTTGCTCAATCTACCTGCAGTGA...CCAGTTTGGCTGTTGCCCGGACAGGACAGGACCTCCATTGGGCGCAGCAGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR TCA 90 bp TTGAGCCCCTGGAGCCCTCAGGACCTACTGATAAAGCATGTCCTCTGCAGTATATCAGGCCCATTACCATaGCTGGCCCTGACTCTGGCC +
Preference number: 2 (lower is better)
Translates to: LSPWSPQDLLIKHVLCSISGPLP*LALTLA
Trigger: GGCCAGAGTCAGGGCCAGTCATGGTAATGGGCCTGA...TATACTGCAGAGGACATGCTTTATCAGTAGGTCCTGAGGGCTCCAGGGGCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR GCA 90 bp GAGCGGCAAGTTCATGGGTCACTGGCTCACACTAAATGCTCAGCCGCCAGCACATCTGTGCTTGCTTTGTaGCAAGTGCCCTCAGCTGCA +
Preference number: 2 (lower is better)
Translates to: ERQVHGSLAHTKCSAASTSVLAL*QVPSAA
Trigger: TGCAGCTGAGGGCACTTGGCACAAAGCAAGCACAGA...TGTGCTGGCGGCTGAGCATTTAGTGTGAGCCAGTGACCCATGAACTTGCCGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR GCA 90 bp CAGCACTCACTGGCACTCACAGGTGCCTTACATACCTTACGGGGGCCAACACTGTCTGCTGTCTGTGCTTaGTTTGTGCCAAGTGCCCTC +
Preference number: 2 (lower is better)
Translates to: QHSLALTGALHTLRGPTLSAVCA*FVPSAL
Trigger: GAGGGCACTTGGCACAAAGCAAGCACAGACAGCAGA...CAGTGTTGGCCCCCGTAAGGTATGTAAGGCACCTGTGAGTGCCAGTGAGTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR GCA 90 bp CCTGCTGCTGCGCCCAATGGAGGTCCTGTCCTGTCCGGGCAACAGCCAAACTGGGCCTGTGAACACATTTaGATAGCACTCAAGAAGGTT +
Preference number: 2 (lower is better)
Translates to: PAAAPNGGPVLSGQQPNWACEHI*IALKKV
Trigger: AACCTTCTTGAGTGCTATGCAAATGTGTTCACAGGC...CCAGTTTGGCTGTTGCCCGGACAGGACAGGACCTCCATTGGGCGCAGCAGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR CCA 90 bp AGAAAGGGGCACAAACTGTGTGCCTGCGGTAAATGTCTGCCCCCACACATAGACGAAGAAAGTCCTGGTTaGAGGCGCAAGGCCTGCAGC +
Preference number: 2 (lower is better)
Translates to: RKGHKLCACGKCLPPHIDEESPG*RRKACS
Trigger: GCTGCAGGCCTTGCGCCTCCAACCAGGACTTTCTTC...GTCTATGTGTGGGGGCAGACATTTACCGCAGGCACACAGTTTGTGCCCCTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR TCA 90 bp ACTCTGGCCCTCACAGAGCGGCAAGTTCATGGGTCACTGGCTCACACTAAATGCGAATCCCCAATAATGTaGCTGCACAGCTCCGTCCTC +
Preference number: 2 (lower is better)
Translates to: TLALTERQVHGSLAHTKCESPIM*LHSSVL
Trigger: GAGGACGGAGCTGTGCAGTCACATTATTGGGGATTC...GCATTTAGTGTGAGCCAGTGACCCATGAACTTGCCGCTCTGTGAGGGCCAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR TCA 90 bp ACCCCAAGGCTCAGGACCACCCCCATTGCCTGTGAACACATTTGCATAGCACTCTCAAAGGGATGTCCATaGACCAGCTGCACCCAAGCA +
Preference number: 2 (lower is better)
Translates to: TPRLRTTPIACEHICIALSKGCP*TSCTQA
Trigger: TGCTTGGGTGCAGCTGGTTCATGGACATCCCTTTGA...GAGTGCTATGCAAATGTGTTCACAGGCAATGGGGGTGGTCCTGAGCCTTGGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR TCA 90 bp CCTGCTGCTGCGCCCAATGGAGGTCCTGTCCTGTCCGGGCAACAGCCAAACTGGTTCATAACATACAGCTaGAACCTTTGCCCTTCTTTG +
Preference number: 2 (lower is better)
Translates to: PAAAPNGGPVLSGQQPNWFITYS*NLCPSL
Trigger: CAAAGAAGGGCAAAGGTTTCAGCTGTATGTTATGAA...CCAGTTTGGCTGTTGCCCGGACAGGACAGGACCTCCATTGGGCGCAGCAGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR TCA 90 bp TGGTCAGCTGAACCCCTGGAACCGTTAGAACCTACTAATCCTGCCAACCATCCACCACCATCAGGTGGGTaGTCCCAGAAGCAGCTACAG +
Preference number: 2 (lower is better)
Translates to: WSAEPLEPLEPTNPANHPPPSGG*SQKQLQ
Trigger: CTGTAGCTGCTTCTGGGATCACCCACCTGATGGTGG...TGGATGGTTGGCAGGATTAGTAGGTTCTAACGGTTCCAGGGGTTCAGCTGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR TCA 90 bp CTAGACCTCATTCATCACAGCCAGATGATGCCACCAGAAAGAGCAAGGTACTGTTGGGCGCCAGTGCCCTaGCCCAGCTACCAGCAAATG +
Preference number: 2 (lower is better)
Translates to: LDLIHHSQMMPPERARYCWAPVP*PSYQQM
Trigger: CATTTGCTGGTAGCTGGGTCAGGGCACTGGCGCCCA...ACAGTACCTTGCTCTTTCTGGTGGCATCATCTGGCTGTGATGAATGAGGTCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR GCA 90 bp ACTCTGGCCCTCACAGAGCGGCAAGTTCATGGGTCACTGGCTCACACTAAATGCTCCCACAATAAACCCTaGCAGCAAACGCACTCCAGC +
Preference number: 2 (lower is better)
Translates to: TLALTERQVHGSLAHTKCSHNKP*QQTHSS
Trigger: GCTGGAGTGCGTTTGCTGGCAGGGTTTATTGTGGGA...GCATTTAGTGTGAGCCAGTGACCCATGAACTTGCCGCTCTGTGAGGGCCAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR GCA 90 bp ACTCTGGCCCTCACAGAGCGGCAAGTTCATGGGTCACTGGCTCACACTAAATGCCACAAACTGTGTGCCTaGGGTAAATGTCTGCCCCCA +
Preference number: 2 (lower is better)
Translates to: TLALTERQVHGSLAHTKCHKLCA*GKCLPP
Trigger: TGGGGGCAGACATTTACCGCAGGCACACAGTTTGTG...GCATTTAGTGTGAGCCAGTGACCCATGAACTTGCCGCTCTGTGAGGGCCAGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR GCA 90 bp TGGCCCAGCTGCCTTGCCCACTGGTCTGCACAGGGACTCATGGGCACAGCCTGTGAATGCTCCACCATATaGTTCGGGACAAATTATGAA +
Preference number: 2 (lower is better)
Translates to: WPSCLAHWSAQGLMGTACECSTI*FGTNYE
Trigger: TTCATAATTTGTCCCGAAGCATATGGTGGAGCATTC...ACAGGCTGTGCCCATGAGTCCCTGTGCAGACCAGTGGGCAAGGCAGCTGGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR CCA 90 bp CAGCACTCACTGGCACTCACAGGTGCCTTACATACCTTACGGGGGCCAACACTGTTAAGAAGAAAGTCCTaGTTGGAGGCGCAAGGCCTG +
Preference number: 2 (lower is better)
Translates to: QHSLALTGALHTLRGPTLLRRKS*LEAQGL
Trigger: CAGGCCTTGCGCCTCCAACCAGGACTTTCTTCTTAA...CAGTGTTGGCCCCCGTAAGGTATGTAAGGCACCTGTGAGTGCCAGTGAGTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR CCA 90 bp TGCTGCGCCCAATGGAGGTCCTGTCCTGTCCGGGCAACAGCCAAACTGGCGACATACCTCCTGCAAGCATaGCTGTTTCTCTTTCACATT +
Preference number: 2 (lower is better)
Translates to: CCAQWRSCPVRATAKLATYLLQA*LFLFHI
Trigger: AATGTGAAAGAGAAACAGCCATGCTTGCAGGAGGTA...TGTCGCCAGTTTGGCTGTTGCCCGGACAGGACAGGACCTCCATTGGGCGCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR CCA 90 bp AGAAAGGGGCACAAACTGTGTGCCTGCGGTAAATGTCTGCCCCCACACATAGACGTCACCACCATCAGGTaGGTGATCCCAGAAGCAGCT +
Preference number: 2 (lower is better)
Translates to: RKGHKLCACGKCLPPHIDVTTIR*VIPEAA
Trigger: AGCTGCTTCTGGGATCACCCACCTGATGGTGGTGAC...GTCTATGTGTGGGGGCAGACATTTACCGCAGGCACACAGTTTGTGCCCCTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR CCA 90 bp CTAGACCTCATTCATCACAGCCAGATGATGCCACCAGAAAGAGCAAGGTACTGTGCAGACAACAGACACTaGCCTCCCCCTCGCCCCATC +
Preference number: 2 (lower is better)
Translates to: LDLIHHSQMMPPERARYCADNRH*PPPRPI
Trigger: GATGGGGCGAGGGGGAGGCCAGTGTCTGTTGTCTGC...ACAGTACCTTGCTCTTTCTGGTGGCATCATCTGGCTGTGATGAATGAGGTCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR TCA 90 bp AAATTCCTCTCCCACAATAAACCCTGCCAGCAAACGCACTCCAGCACTGCCTGGGAATCCCCAATAATGTaGCTGCACAGCTCCGTCCTC +
Preference number: 2 (lower is better)
Translates to: KFLSHNKPCQQTHSSTAWESPIM*LHSSVL
Trigger: GAGGACGGAGCTGTGCAGTCACATTATTGGGGATTC...CCAGGCAGTGCTGGAGTGCGTTTGCTGGCAGGGTTTATTGTGGGAGAGGAATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR TCA 90 bp GGTCACTGGCTCACACTAAATGCTCAGCCGCCAGCACAGATCCAAACAAGACCTTGCTACTTGGTCAGCTaGACCCCTGGAACCGTTAGA +
Preference number: 2 (lower is better)
Translates to: GHWLTLNAQPPAQIQTRPCYLVS*TPGTVR
Trigger: TCTAACGGTTCCAGGGGTTCAGCTGACCAAGTAGCA...AGGTCTTGTTTGGATCTGTGCTGGCGGCTGAGCATTTAGTGTGAGCCAGTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR GCA 90 bp ACTGATAAAGCATGTCCTCTGCAGTATACTCAAGAGTCTGCTGCCCTTCAGAAACTCAAGCCACACCCCTaGCACCTGCTGCTGCGCCCA +
Preference number: 2 (lower is better)
Translates to: TDKACPLQYTQESAALQKLKPHP*HLLLRP
Trigger: TGGGCGCAGCAGCAGGTGGCAGGGGTGTGGCTTGAG...TTTCTGAAGGGCAGCAGACTCTTGAGTATACTGCAGAGGACATGCTTTATCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR CCA 90 bp AGAAAGGGGCACAAACTGTGTGCCTGCGGTAAATGTCTGCCCCCACACATAGACGTCCACATCCCTAACTaGCAACCCACATCAACCCCA +
Preference number: 2 (lower is better)
Translates to: RKGHKLCACGKCLPPHIDVHIPN*QPTSTP
Trigger: TGGGGTTGATGTGGGTTGCCAGTTAGGGATGTGGAC...GTCTATGTGTGGGGGCAGACATTTACCGCAGGCACACAGTTTGTGCCCCTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR CCA 90 bp AGATGGAATTACCAACAGAGACTTGAAGAAAGGGGCACAAACTGTGTGCCTGCGCACTCCAGCACTGCCTaGCCCTCTCTGCTGTCTGTG +
Preference number: 2 (lower is better)
Translates to: RWNYQQRLEERGTNCVPAHSSTA*PSLLSV
Trigger: CACAGACAGCAGAGAGGGCCAGGCAGTGCTGGAGTG...CGCAGGCACACAGTTTGTGCCCCTTTCTTCAAGTCTCTGTTGGTAATTCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR GCA 90 bp TTGAGCCCCTGGAGCCCTCAGGACCTACTGATAAAGCATGTCCTCTGCAGTATACCAAGTGCCCTCAGCTaGAAAAGAGATGGCAGGAGA +
Preference number: 2 (lower is better)
Translates to: LSPWSPQDLLIKHVLCSIPSALS*KRDGRR
Trigger: TCTCCTGCCATCTCTTTTGCAGCTGAGGGCACTTGG...TATACTGCAGAGGACATGCTTTATCAGTAGGTCCTGAGGGCTCCAGGGGCTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR GCA 90 bp GGTCACTGGCTCACACTAAATGCTCAGCCGCCAGCACAGATCCAAACAAGACCTACACCATCCTGTGTGTaGCAAGTACCAAGCAAGCCT +
Preference number: 2 (lower is better)
Translates to: GHWLTLNAQPPAQIQTRPTPSCV*QVPSKP
Trigger: AGGCTTGCTTGGTACTTGGCACACACAGGATGGTGT...AGGTCTTGTTTGGATCTGTGCTGGCGGCTGAGCATTTAGTGTGAGCCAGTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR CCA 90 bp AAATTCCTCTCCCACAATAAACCCTGCCAGCAAACGCACTCCAGCACTGCCTGGTTAAGAAGAAAGTCCTaGTTGGAGGCGCAAGGCCTG +
Preference number: 2 (lower is better)
Translates to: KFLSHNKPCQQTHSSTAWLRRKS*LEAQGL
Trigger: CAGGCCTTGCGCCTCCAACCAGGACTTTCTTCTTAA...CCAGGCAGTGCTGGAGTGCGTTTGCTGGCAGGGTTTATTGTGGGAGAGGAATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR CCA 90 bp TGGTCAGCTGAACCCCTGGAACCGTTAGAACCTACTAATCCTGCCAACCATCCAGTCCACATCCCTAACTaGCAACCCACATCAACCCCA +
Preference number: 2 (lower is better)
Translates to: WSAEPLEPLEPTNPANHPVHIPN*QPTSTP
Trigger: TGGGGTTGATGTGGGTTGCCAGTTAGGGATGTGGAC...TGGATGGTTGGCAGGATTAGTAGGTTCTAACGGTTCCAGGGGTTCAGCTGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR TCA 90 bp AGGACCACCCCCATTGCCTGTGAACACATTTGCATAGCACTCAAGAAGGTTTCCTGCTACTTGGTCAGCTaGACCCCTGGAACCGTTAGA +
Preference number: 2 (lower is better)
Translates to: RTTPIACEHICIALKKVSCYLVS*TPGTVR
Trigger: TCTAACGGTTCCAGGGGTTCAGCTGACCAAGTAGCA...GGAAACCTTCTTGAGTGCTATGCAAATGTGTTCACAGGCAATGGGGGTGGTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR GCA 90 bp ACCCCAAGGCTCAGGACCACCCCCATTGCCTGTGAACACATTTGCATAGCACTCACATATCCACGGCCCTaGCTTTCTACAAGAAATTGG +
Preference number: 2 (lower is better)
Translates to: TPRLRTTPIACEHICIALTYPRP*LSTRNW
Trigger: CCAATTTCTTGTAGAAAGGCAGGGCCGTGGATATGT...GAGTGCTATGCAAATGTGTTCACAGGCAATGGGGGTGGTCCTGAGCCTTGGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR GCA 90 bp AGAAAGGGGCACAAACTGTGTGCCTGCGGTAAATGTCTGCCCCCACACATAGACTTGCTTTGTGCCAAGTaGCCTCAGCTGCAAAAGAGA +
Preference number: 2 (lower is better)
Translates to: RKGHKLCACGKCLPPHIDLLCAK*PQLQKR
Trigger: TCTCTTTTGCAGCTGAGGGCACTTGGCACAAAGCAA...GTCTATGTGTGGGGGCAGACATTTACCGCAGGCACACAGTTTGTGCCCCTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR CCA 90 bp CTAGACCTCATTCATCACAGCCAGATGATGCCACCAGAAAGAGCAAGGTACTGTCAGCTGCAAAAGAGATaGCAGGAGAGGCTCGCAGAC +
Preference number: 2 (lower is better)
Translates to: LDLIHHSQMMPPERARYCQLQKR*QERLAD
Trigger: GTCTGCGAGCCTCTCCTGCCATCTCTTTTGCAGCTG...ACAGTACCTTGCTCTTTCTGGTGGCATCATCTGGCTGTGATGAATGAGGTCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR CCA 90 bp TTCAGTCCTGTGGACCAAGATAAGGCTATCCCCACAGGCTCTCTCTTCTTCAAAAAACCACCACTGCACTaGGAAGAAGACGCACGCTCC +
Preference number: 2 (lower is better)
Translates to: FSPVDQDKAIPTGSLFFKKPPLH*EEDARS
Trigger: GGAGCGTGCGTCTTCTTCCCAGTGCAGTGGTGGTTT...TTTGAAGAAGAGAGAGCCTGTGGGGATAGCCTTATCTTGGTCCACAGGACTGAA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR CCA 90 bp ACCCCAAGGCTCAGGACCACCCCCATTGCCTGTGAACACATTTGCATAGCACTCAAGTTCATGGGTCACTaGCTCACACTAAATGCTCAG +
Preference number: 2 (lower is better)
Translates to: TPRLRTTPIACEHICIALKFMGH*LTLNAQ
Trigger: CTGAGCATTTAGTGTGAGCCAGTGACCCATGAACTT...GAGTGCTATGCAAATGTGTTCACAGGCAATGGGGGTGGTCCTGAGCCTTGGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR TCA 90 bp ACTCTGGCCCTCACAGAGCGGCAAGTTCATGGGTCACTGGCTCACACTAAATGCTCACTGCAGGTAGATTaGGCAAGCTTTTTGTGTTTG +
Preference number: 2 (lower is better)
Translates to: TLALTERQVHGSLAHTKCSLQVD*ASFLCL
Trigger: CAAACACAAAAAGCTTGCTCAATCTACCTGCAGTGA...GCATTTAGTGTGAGCCAGTGACCCATGAACTTGCCGCTCTGTGAGGGCCAGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR GCA 90 bp TTCAGTCCTGTGGACCAAGATAAGGCTATCCCCACAGGCTCTCTCTTCTTCAAACCTCTCTGCTGTCTGTaGTTGCTTTGTGCCAAGTGC +
Preference number: 2 (lower is better)
Translates to: FSPVDQDKAIPTGSLFFKPLCCL*LLCAKC
Trigger: GCACTTGGCACAAAGCAAGCACAGACAGCAGAGAGG...TTTGAAGAAGAGAGAGCCTGTGGGGATAGCCTTATCTTGGTCCACAGGACTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR TCA 90 bp ACTGATAAAGCATGTCCTCTGCAGTATACTCAAGAGTCTGCTGCCCTTCAGAAACACTCTGACCCTCACTaGGAACCGACATGCACTCTC +
Preference number: 2 (lower is better)
Translates to: TDKACPLQYTQESAALQKHSDPH*EPTCTL
Trigger: GAGAGTGCATGTCGGTTCTCAGTGAGGGTCAGAGTG...TTTCTGAAGGGCAGCAGACTCTTGAGTATACTGCAGAGGACATGCTTTATCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR TCA 90 bp ACTCTGGCCCTCACAGAGCGGCAAGTTCATGGGTCACTGGCTCACACTAAATGCGTCCAGATTCTTACCTaGTATCTACCTTTCGTATCT +
Preference number: 2 (lower is better)
Translates to: TLALTERQVHGSLAHTKCVQILT*YLPFVS
Trigger: AGATACGAAAGGTAGATATCAGGTAAGAATCTGGAC...GCATTTAGTGTGAGCCAGTGACCCATGAACTTGCCGCTCTGTGAGGGCCAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR GCA 90 bp ACTCTGGCCCTCACAGAGCGGCAAGTTCATGGGTCACTGGCTCACACTAAATGCAGTCAGAAAGATTTCTaGACGGATGTGCAATGCAAA +
Preference number: 2 (lower is better)
Translates to: TLALTERQVHGSLAHTKCSQKDF*TDVQCK
Trigger: TTTGCATTGCACATCCGTGCAGAAATCTTTCTGACT...GCATTTAGTGTGAGCCAGTGACCCATGAACTTGCCGCTCTGTGAGGGCCAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR GCA 90 bp TTCAGTCCTGTGGACCAAGATAAGGCTATCCCCACAGGCTCTCTCTTCTTCAAAAGGCCAACCACACTCTaGTTTAGAGACCCTCTCAGA +
Preference number: 2 (lower is better)
Translates to: FSPVDQDKAIPTGSLFFKRPTTL*FRDPLR
Trigger: TCTGAGAGGGTCTCTAAAGCAGAGTGTGGTTGGCCT...TTTGAAGAAGAGAGAGCCTGTGGGGATAGCCTTATCTTGGTCCACAGGACTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR CCA 90 bp ACTGATAAAGCATGTCCTCTGCAGTATACTCAAGAGTCTGCTGCCCTTCAGAAACAGCTGCAAAAGAGATaGCAGGAGAGGCTCGCAGAC +
Preference number: 2 (lower is better)
Translates to: TDKACPLQYTQESAALQKQLQKR*QERLAD
Trigger: GTCTGCGAGCCTCTCCTGCCATCTCTTTTGCAGCTG...TTTCTGAAGGGCAGCAGACTCTTGAGTATACTGCAGAGGACATGCTTTATCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR CCA 90 bp TTCAGTCCTGTGGACCAAGATAAGGCTATCCCCACAGGCTCTCTCTTCTTCAAACCAAACTGGCGACAATaGACACATCCAACAGTCAGC +
Preference number: 2 (lower is better)
Translates to: FSPVDQDKAIPTGSLFFKPNWRQ*THPTVS
Trigger: GCTGACTGTTGGATGTGTCCATTGTCGCCAGTTTGG...TTTGAAGAAGAGAGAGCCTGTGGGGATAGCCTTATCTTGGTCCACAGGACTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR GCA 90 bp CAGCACTCACTGGCACTCACAGGTGCCTTACATACCTTACGGGGGCCAACACTGATTTCTGCACGGATGTaGAATGCAAACTTATTTCAT +
Preference number: 2 (lower is better)
Translates to: QHSLALTGALHTLRGPTLISARM*NANLFH
Trigger: ATGAAATAAGTTTGCATTGCACATCCGTGCAGAAAT...CAGTGTTGGCCCCCGTAAGGTATGTAAGGCACCTGTGAGTGCCAGTGAGTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR CCA 90 bp ACTGGCAACCCACATCAACCCCAAAAGGTTGAAGAATCATCTAAGATATTTCAGGAAGAAAGTCCTGGTTaGAGGCGCAAGGCCTGCAGC +
Preference number: 2 (lower is better)
Translates to: TGNPHQPQKVEESSKIFQEESPG*RRKACS
Trigger: GCTGCAGGCCTTGCGCCTCCAACCAGGACTTTCTTC...CTGAAATATCTTAGATGATTCTTCAACCTTTTGGGGTTGATGTGGGTTGCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR CCA 90 bp AGGACCACCCCCATTGCCTGTGAACACATTTGCATAGCACTCAAGAAGGTTTCCCGCCCCAAATTTCACTaGCCACACTACCATAATCTT +
Preference number: 2 (lower is better)
Translates to: RTTPIACEHICIALKKVSRPKFH*PHYHNL
Trigger: AAGATTATGGTAGTGTGGCCAGTGAAATTTGGGGCG...GGAAACCTTCTTGAGTGCTATGCAAATGTGTTCACAGGCAATGGGGGTGGTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR CCA 90 bp AGATGGAATTACCAACAGAGACTTGAAGAAAGGGGCACAAACTGTGTGCCTGCGCGACATGCACTCTCATaGATACAGGACGGGCATATT +
Preference number: 2 (lower is better)
Translates to: RWNYQQRLEERGTNCVPARHALS*IQDGHI
Trigger: AATATGCCCGTCCTGTATCCATGAGAGTGCATGTCG...CGCAGGCACACAGTTTGTGCCCCTTTCTTCAAGTCTCTGTTGGTAATTCCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR CCA 90 bp ACCCCAAGGCTCAGGACCACCCCCATTGCCTGTGAACACATTTGCATAGCACTCCATCCACTAAACAGATaGAATTACCAACAGAGACTT +
Preference number: 2 (lower is better)
Translates to: TPRLRTTPIACEHICIALHPLNR*NYQQRL
Trigger: AAGTCTCTGTTGGTAATTCCATCTGTTTAGTGGATG...GAGTGCTATGCAAATGTGTTCACAGGCAATGGGGGTGGTCCTGAGCCTTGGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR CCA 90 bp TTGAGCCCCTGGAGCCCTCAGGACCTACTGATAAAGCATGTCCTCTGCAGTATAATAACTAGTACATGTTaGCCTTTCACCAGCACTCAC +
Preference number: 2 (lower is better)
Translates to: LSPWSPQDLLIKHVLCSIITSTC*PFTSTH
Trigger: GTGAGTGCTGGTGAAAGGCCAACATGTACTAGTTAT...TATACTGCAGAGGACATGCTTTATCAGTAGGTCCTGAGGGCTCCAGGGGCTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR TCA 90 bp CTAGACCTCATTCATCACAGCCAGATGATGCCACCAGAAAGAGCAAGGTACTGTTTACCAACAGAGACTTaGAGAAAGGGGCACAAACTG +
Preference number: 2 (lower is better)
Translates to: LDLIHHSQMMPPERARYCLPTET*RKGHKL
Trigger: CAGTTTGTGCCCCTTTCTTCAAGTCTCTGTTGGTAA...ACAGTACCTTGCTCTTTCTGGTGGCATCATCTGGCTGTGATGAATGAGGTCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR GCA 90 bp CTAGACCTCATTCATCACAGCCAGATGATGCCACCAGAAAGAGCAAGGTACTGTGCAAATTTCTCAGAATaGTCCACCATATGCTTCGGG +
Preference number: 2 (lower is better)
Translates to: LDLIHHSQMMPPERARYCANFSE*STICFG
Trigger: CCCGAAGCATATGGTGGAGCATTCTGAGAAATTTGC...ACAGTACCTTGCTCTTTCTGGTGGCATCATCTGGCTGTGATGAATGAGGTCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR GCA 90 bp ACTGATAAAGCATGTCCTCTGCAGTATACTCAAGAGTCTGCTGCCCTTCAGAAAAGGCCAACCACACTCTaGTTTAGAGACCCTCTCAGA +
Preference number: 2 (lower is better)
Translates to: TDKACPLQYTQESAALQKRPTTL*FRDPLR
Trigger: TCTGAGAGGGTCTCTAAAGCAGAGTGTGGTTGGCCT...TTTCTGAAGGGCAGCAGACTCTTGAGTATACTGCAGAGGACATGCTTTATCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR TCA 90 bp TGGTCAGCTGAACCCCTGGAACCGTTAGAACCTACTAATCCTGCCAACCATCCAAAAGAAACAGGTCGCTaGAAACTAAAATGTCCACAT +
Preference number: 2 (lower is better)
Translates to: WSAEPLEPLEPTNPANHPKETGR*KLKCPH
Trigger: ATGTGGACATTTTAGTTTTCAGCGACCTGTTTCTTT...TGGATGGTTGGCAGGATTAGTAGGTTCTAACGGTTCCAGGGGTTCAGCTGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR GCA 90 bp GGTCACTGGCTCACACTAAATGCTCAGCCGCCAGCACAGATCCAAACAAGACCTATTTCTGCACGGATGTaGAATGCAAACTTATTTCAT +
Preference number: 2 (lower is better)
Translates to: GHWLTLNAQPPAQIQTRPISARM*NANLFH
Trigger: ATGAAATAAGTTTGCATTGCACATCCGTGCAGAAAT...AGGTCTTGTTTGGATCTGTGCTGGCGGCTGAGCATTTAGTGTGAGCCAGTGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR CCA 90 bp CTAGACCTCATTCATCACAGCCAGATGATGCCACCAGAAAGAGCAAGGTACTGTTACCTCCTGCAAGCATaGCTGTTTCTCTTTCACATT +
Preference number: 2 (lower is better)
Translates to: LDLIHHSQMMPPERARYCYLLQA*LFLFHI
Trigger: AATGTGAAAGAGAAACAGCCATGCTTGCAGGAGGTA...ACAGTACCTTGCTCTTTCTGGTGGCATCATCTGGCTGTGATGAATGAGGTCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR CCA 90 bp CTAGACCTCATTCATCACAGCCAGATGATGCCACCAGAAAGAGCAAGGTACTGTCATCCACTAAACAGATaGAATTACCAACAGAGACTT +
Preference number: 2 (lower is better)
Translates to: LDLIHHSQMMPPERARYCHPLNR*NYQQRL
Trigger: AAGTCTCTGTTGGTAATTCCATCTGTTTAGTGGATG...ACAGTACCTTGCTCTTTCTGGTGGCATCATCTGGCTGTGATGAATGAGGTCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR TCA 90 bp ACTGATAAAGCATGTCCTCTGCAGTATACTCAAGAGTCTGCTGCCCTTCAGAAAATGTCCATGTTTACATaGACTAGGTCCTTTGCTTAC +
Preference number: 2 (lower is better)
Translates to: TDKACPLQYTQESAALQKMSMFT*TRSFAY
Trigger: GTAAGCAAAGGACCTAGTTCATGTAAACATGGACAT...TTTCTGAAGGGCAGCAGACTCTTGAGTATACTGCAGAGGACATGCTTTATCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR CCA 90 bp ACTGATAAAGCATGTCCTCTGCAGTATACTCAAGAGTCTGCTGCCCTTCAGAAAACGTTTCCATTCCTTTaGATTTTGCATATGATGGTT +
Preference number: 2 (lower is better)
Translates to: TDKACPLQYTQESAALQKTFPFL*ILHMMV
Trigger: AACCATCATATGCAAAATCCAAAGGAATGGAAACGT...TTTCTGAAGGGCAGCAGACTCTTGAGTATACTGCAGAGGACATGCTTTATCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR GCA 72 bp TGGGCACAGCCTGTGGTGAGGAGGAGACACCTGTCATaGCAGTCCTGGGAGCACACCACCCTTCTGCAGGCC +
Preference number: 3 (lower is better)
Translates to: WAQPVVRRRHLS*QSWEHTTLLQA
Trigger: GGCCTGCAGAAGGGTGGTGTGCTCCCAGGACTGGCATGACAGGTGTCTCCTCCTCACCACAGGCTGTGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR GCA 72 bp AGGAGCACAAACGGCTGGCCTGAGATCTGGCCCAGCTaGCTTGCCCACTGGTCTGCACAGGGACTCATGGGC +
Preference number: 3 (lower is better)
Translates to: RSTNGWPEIWPS*LAHWSAQGLMG
Trigger: GCCCATGAGTCCCTGTGCAGACCAGTGGGCAAGGCAGCTGGGCCAGATCTCAGGCCAGCCGTTTGTGCTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR CCA 72 bp CCACCAGAGCCCACAGCACTCAAACCACCACTGCACTaGGAAGAAGACGCACGCTCCTGCCCTAGAGGCCGC +
Preference number: 3 (lower is better)
Translates to: PPEPTALKPPLH*EEDARSCPRGR
Trigger: GCGGCCTCTAGGGCAGGAGCGTGCGTCTTCTTCCCAGTGCAGTGGTGGTTTGAGTGCTGTGGGCTCTGGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR CCA 72 bp TCAAGCCACACCCCTGCCACCTGCTGCTGCGCCCAATaGAGGTCCTGTCCTGTCCGGGCAACAGCCAAACTG +
Preference number: 3 (lower is better)
Translates to: SSHTPATCCCAQ*RSCPVRATAKL
Trigger: CAGTTTGGCTGTTGCCCGGACAGGACAGGACCTCCATTGGGCGCAGCAGCAGGTGGCAGGGGTGTGGCTTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR CAA 90 bp CCTGCTGCTGCGCCCAATGGAGGTCCTGTCCTGTCCGGGCAACAGCCAAACTGGAGAAGAAAGTCCTGGTaGGAGGCGCAAGGCCTGCAG +
Preference number: 3 (lower is better)
Translates to: PAAAPNGGPVLSGQQPNWRRKSW*EAQGLQ
Trigger: CTGCAGGCCTTGCGCCTCCAACCAGGACTTTCTTCT...CCAGTTTGGCTGTTGCCCGGACAGGACAGGACCTCCATTGGGCGCAGCAGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR TCA 72 bp CTGGTCTGCACAGGGACTCATGGGCACAGCCTGTGGTaGGGAGGAGACACCTGTCATGCCAGTCCTGGGAGC +
Preference number: 3 (lower is better)
Translates to: LVCTGTHGHSLW*GGDTCHASPGS
Trigger: GCTCCCAGGACTGGCATGACAGGTGTCTCCTCCTCACCACAGGCTGTGCCCATGAGTCCCTGTGCAGACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR CCA 72 bp CCAGCTGCCTTGCCCACTGGTCTGCACAGGGACTCATaGGCACAGCCTGTGGTGAGGAGGAGACACCTGTCA +
Preference number: 3 (lower is better)
Translates to: PAALPTGLHRDS*AQPVVRRRHLS
Trigger: TGACAGGTGTCTCCTCCTCACCACAGGCTGTGCCCATGAGTCCCTGTGCAGACCAGTGGGCAAGGCAGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR CCA 72 bp AACCCTGCTAGGAGCACAAACGGCTGGCCTGAGATCTaGCCCAGCTGCCTTGCCCACTGGTCTGCACAGGGA +
Preference number: 3 (lower is better)
Translates to: NPARSTNGWPEI*PSCLAHWSAQG
Trigger: TCCCTGTGCAGACCAGTGGGCAAGGCAGCTGGGCCAGATCTCAGGCCAGCCGTTTGTGCTCCTAGCAGGGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR CAA 90 bp CCTGCTGCTGCGCCCAATGGAGGTCCTGTCCTGTCCGGGCAACAGCCAAACTGGCTCTGCTGTCTGTGCTaGCTTTGTGCCAAGTGCCCT +
Preference number: 3 (lower is better)
Translates to: PAAAPNGGPVLSGQQPNWLCCLC*LCAKCP
Trigger: AGGGCACTTGGCACAAAGCAAGCACAGACAGCAGAG...CCAGTTTGGCTGTTGCCCGGACAGGACAGGACCTCCATTGGGCGCAGCAGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR TCA 72 bp AATGCTAGTGGGCATCCTCACTGGGCGCCAGTGCCCTaGCCCAGCTACCAGCAAATGAAGAGGAGCAGAGCC +
Preference number: 3 (lower is better)
Translates to: NASGHPHWAPVP*PSYQQMKRSRA
Trigger: GGCTCTGCTCCTCTTCATTTGCTGGTAGCTGGGTCAGGGCACTGGCGCCCAGTGAGGATGCCCACTAGCATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR TCA 72 bp AGGCCTTACATCCCCCACCCCCACTCTGACCCTCACTaGGAACCGACATGCACTCTCATGGATACAGGACGG +
Preference number: 3 (lower is better)
Translates to: RPYIPHPHSDPH*EPTCTLMDTGR
Trigger: CCGTCCTGTATCCATGAGAGTGCATGTCGGTTCTCAGTGAGGGTCAGAGTGGGGGTGGGGGATGTAAGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR TCA 72 bp TGGAAGTGCCTTCAGGCCCATTACCATGACTGGCCCTaGCTCTGGCCCTCACAGAGCGGCAAGTTCATGGGT +
Preference number: 3 (lower is better)
Translates to: WKCLQAHYHDWP*LWPSQSGKFMG
Trigger: ACCCATGAACTTGCCGCTCTGTGAGGGCCAGAGTCAGGGCCAGTCATGGTAATGGGCCTGAAGGCACTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR CCA 72 bp ACAGAATTTGCTTTAAGACCAACCCACAGAGTCAGCTaGAGACTAACGGCGCTGGGGCCTGCTGGGCCGGGA +
Preference number: 3 (lower is better)
Translates to: TEFALRPTHRVS*RLTALGPAGPG
Trigger: TCCCGGCCCAGCAGGCCCCAGCGCCGTTAGTCTCCAGCTGACTCTGTGGGTTGGTCTTAAAGCAAATTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR CCA 72 bp AGGGATGTCCATGAACCAGCTGCACCCAAGCAGCTGTaGCTTCCCTACTCTCTCCCAAACCTCGCAACTCCC +
Preference number: 3 (lower is better)
Translates to: RDVHEPAAPKQL*LPYSLPNLATP
Trigger: GGGAGTTGCGAGGTTTGGGAGAGAGTAGGGAAGCCACAGCTGCTTGGGTGCAGCTGGTTCATGGACATCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR CCA 72 bp CTCTGGCCCTCACAGAGCGGCAAGTTCATGGGTCACTaGCTCACACTAAATGCTCAGCCGCCAGCACAGATC +
Preference number: 3 (lower is better)
Translates to: LWPSQSGKFMGH*LTLNAQPPAQI
Trigger: GATCTGTGCTGGCGGCTGAGCATTTAGTGTGAGCCAGTGACCCATGAACTTGCCGCTCTGTGAGGGCCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR GCA 72 bp GTTGGCCTTTCACCAGCACTCACTGGCACTCACAGGTaGCTTACATACCTTACGGGGGCCAACACTGACAGG +
Preference number: 3 (lower is better)
Translates to: VGLSPALTGTHR*LTYLTGANTDR
Trigger: CCTGTCAGTGTTGGCCCCCGTAAGGTATGTAAGGCACCTGTGAGTGCCAGTGAGTGCTGGTGAAAGGCCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR CCA 72 bp AATGGAGGTCCTGTCCTGTCCGGGCAACAGCCAAACTaGCGACAATGGACACATCCAACAGTCAGCTGTCGG +
Preference number: 3 (lower is better)
Translates to: NGGPVLSGQQPN*RQWTHPTVSCR
Trigger: CCGACAGCTGACTGTTGGATGTGTCCATTGTCGCCAGTTTGGCTGTTGCCCGGACAGGACAGGACCTCCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR CAA 90 bp GGTCACTGGCTCACACTAAATGCTCAGCCGCCAGCACAGATCCAAACAAGACCTAGAAGAAAGTCCTGGTaGGAGGCGCAAGGCCTGCAG +
Preference number: 3 (lower is better)
Translates to: GHWLTLNAQPPAQIQTRPRRKSW*EAQGLQ
Trigger: CTGCAGGCCTTGCGCCTCCAACCAGGACTTTCTTCT...AGGTCTTGTTTGGATCTGTGCTGGCGGCTGAGCATTTAGTGTGAGCCAGTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR CAA 90 bp CCTGCTGCTGCGCCCAATGGAGGTCCTGTCCTGTCCGGGCAACAGCCAAACTGGGTCACTGCAGGTAGATaGAGCAAGCTTTTTGTGTTT +
Preference number: 3 (lower is better)
Translates to: PAAAPNGGPVLSGQQPNWVTAGR*SKLFVF
Trigger: AAACACAAAAAGCTTGCTCAATCTACCTGCAGTGAC...CCAGTTTGGCTGTTGCCCGGACAGGACAGGACCTCCATTGGGCGCAGCAGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR CAA 90 bp CCTGCTGCTGCGCCCAATGGAGGTCCTGTCCTGTCCGGGCAACAGCCAAACTGGAACCTTTGCCCTTCTTaGTTGGGGAAAAACAGCAAT +
Preference number: 3 (lower is better)
Translates to: PAAAPNGGPVLSGQQPNWNLCPS*LGKNSN
Trigger: ATTGCTGTTTTTCCCCAACAAAGAAGGGCAAAGGTT...CCAGTTTGGCTGTTGCCCGGACAGGACAGGACCTCCATTGGGCGCAGCAGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR CAA 90 bp TGCTGCGCCCAATGGAGGTCCTGTCCTGTCCGGGCAACAGCCAAACTGGCGACAATACAGCTGAAACCTTaGCCCTTCTTTGTTGGGGAA +
Preference number: 3 (lower is better)
Translates to: CCAQWRSCPVRATAKLATIQLKP*PFFVGE
Trigger: TTCCCCAACAAAGAAGGGCAAAGGTTTCAGCTGTAT...TGTCGCCAGTTTGGCTGTTGCCCGGACAGGACAGGACCTCCATTGGGCGCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR GCA 72 bp GAGCGGCAAGTTCATGGGTCACTGGCTCACACTAAATaGTCAGCCGCCAGCACAGATCCAAACAAGACCTCC +
Preference number: 3 (lower is better)
Translates to: ERQVHGSLAHTK*SAASTDPNKTS
Trigger: GGAGGTCTTGTTTGGATCTGTGCTGGCGGCTGAGCATTTAGTGTGAGCCAGTGACCCATGAACTTGCCGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR CCA 72 bp CCAGCCGGCCTCAGCAGACAAGTCACCACCATCAGGTaGGTGATCCCAGAAGCAGCTACAGGTTTCTACATT +
Preference number: 3 (lower is better)
Translates to: PAGLSRQVTTIR*VIPEAATGFYI
Trigger: AATGTAGAAACCTGTAGCTGCTTCTGGGATCACCCACCTGATGGTGGTGACTTGTCTGCTGAGGCCGGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR CAA 90 bp CGGCCTCAGCAGACAAGTCACCACCATCAGGTGGGTGATCCCAGAAGCAGCTACAGCAGAGAAACTGCTTaGCTGACACATAAACCACCC +
Preference number: 3 (lower is better)
Translates to: RPQQTSHHHQVGDPRSSYSRETA*LTHKPP
Trigger: GGGTGGTTTATGTGTCAGCAAAGCAGTTTCTCTGCT...GTAGCTGCTTCTGGGATCACCCACCTGATGGTGGTGACTTGTCTGCTGAGGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR CAA 90 bp AAATTCCTCTCCCACAATAAACCCTGCCAGCAAACGCACTCCAGCACTGCCTGGCTCTGCTGTCTGTGCTaGCTTTGTGCCAAGTGCCCT +
Preference number: 3 (lower is better)
Translates to: KFLSHNKPCQQTHSSTAWLCCLC*LCAKCP
Trigger: AGGGCACTTGGCACAAAGCAAGCACAGACAGCAGAG...CCAGGCAGTGCTGGAGTGCGTTTGCTGGCAGGGTTTATTGTGGGAGAGGAATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR TCA 72 bp AGGCCTGCAGCACCAGCTGTGGAATCCCCAATAATGTaGCTGCACAGCTCCGTCCTCAAACATTTGCAGGTG +
Preference number: 3 (lower is better)
Translates to: RPAAPAVESPIM*LHSSVLKHLQV
Trigger: CACCTGCAAATGTTTGAGGACGGAGCTGTGCAGTCACATTATTGGGGATTCCACAGCTGGTGCTGCAGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR TCA 72 bp CTGACTCCACCAAGCCTAAACTCAAAGGGATGTCCATaGACCAGCTGCACCCAAGCAGCTGTGGCTTCCCTA +
Preference number: 3 (lower is better)
Translates to: LTPPSLNSKGCP*TSCTQAAVASL
Trigger: TAGGGAAGCCACAGCTGCTTGGGTGCAGCTGGTTCATGGACATCCCTTTGAGTTTAGGCTTGGTGGAGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR TCA 72 bp CCGGCCTCAGCAGACAAGTCACCACCATCAGGTGGGTaGTCCCAGAAGCAGCTACAGGTTTCTACATTTCCA +
Preference number: 3 (lower is better)
Translates to: PASADKSPPSGG*SQKQLQVSTFP
Trigger: TGGAAATGTAGAAACCTGTAGCTGCTTCTGGGATCACCCACCTGATGGTGGTGACTTGTCTGCTGAGGCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR GCA 72 bp AAATGCAGAGGTACTAGAGGGGAGAAATACGTGCTCTaGCTTCCCCCAGGCCAACCACACTCTGCTTTAGAG +
Preference number: 3 (lower is better)
Translates to: KCRGTRGEKYVL*LPPGQPHSALE
Trigger: CTCTAAAGCAGAGTGTGGTTGGCCTGGGGGAAGGCAGAGCACGTATTTCTCCCCTCTAGTACCTCTGCATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR CCA 72 bp TGTCTCCCCTTCCCAAGTGACTTCACTTCAGTCCTGTaGACCAAGATAAGGCTATCCCCACAGGCTCTCTCT +
Preference number: 3 (lower is better)
Translates to: CLPFPSDFTSVL*TKIRLSPQALS
Trigger: AGAGAGAGCCTGTGGGGATAGCCTTATCTTGGTCCACAGGACTGAAGTGAAGTCACTTGGGAAGGGGAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR CAA 90 bp CAGCACTCACTGGCACTCACAGGTGCCTTACATACCTTACGGGGGCCAACACTGCAGCCCTCACAGGAGTaGTACATGTATGTTTCCATT +
Preference number: 3 (lower is better)
Translates to: QHSLALTGALHTLRGPTLQPSQE*YMYVSI
Trigger: AATGGAAACATACATGTACAACTCCTGTGAGGGCTG...CAGTGTTGGCCCCCGTAAGGTATGTAAGGCACCTGTGAGTGCCAGTGAGTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR CAA 90 bp GTCCATGAACCAGCTGCACCCAAGCAGCTGTGGCTTCCCTACTCTCTCCCAAACTTGCATATGATGGTTTaGCATCAGTCACTGCAGGTA +
Preference number: 3 (lower is better)
Translates to: VHEPAAPKQLWLPYSLPNLHMMV*HQSLQV
Trigger: TACCTGCAGTGACTGATGCAAAACCATCATATGCAA...GTTTGGGAGAGAGTAGGGAAGCCACAGCTGCTTGGGTGCAGCTGGTTCATGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR CAA 90 bp ACCCCAAGGCTCAGGACCACCCCCATTGCCTGTGAACACATTTGCATAGCACTCCAGCCCTCACAGGAGTaGTACATGTATGTTTCCATT +
Preference number: 3 (lower is better)
Translates to: TPRLRTTPIACEHICIALQPSQE*YMYVSI
Trigger: AATGGAAACATACATGTACAACTCCTGTGAGGGCTG...GAGTGCTATGCAAATGTGTTCACAGGCAATGGGGGTGGTCCTGAGCCTTGGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR GCA 72 bp CTCCCAAACCTCGCAACTCCCTCCCAGGACAGTCAGTaGCAAAGAAACAGGTCGCTGAAAACTAAAATGTCC +
Preference number: 3 (lower is better)
Translates to: LPNLATPSQDSQ*QRNRSLKTKMS
Trigger: GGACATTTTAGTTTTCAGCGACCTGTTTCTTTGGCACTGACTGTCCTGGGAGGGAGTTGCGAGGTTTGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR GCA 72 bp GGGTGCAGCCCACTCTTTAAAACACCATCCTGTGTGTaGCAAGTACCAAGCAAGCCTGAAGAGATGCCTGTA +
Preference number: 3 (lower is better)
Translates to: GCSPLFKTPSCV*QVPSKPEEMPV
Trigger: TACAGGCATCTCTTCAGGCTTGCTTGGTACTTGGCACACACAGGATGGTGTTTTAAAGAGTGGGCTGCACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR GCA 72 bp AGGCTCAGGACCACCCCCATTGCCTGTGAACACATTTaGATAGCACTCAAGAAGGTTTCCCAGAATAGCGAC +
Preference number: 3 (lower is better)
Translates to: RLRTTPIACEHI*IALKKVSQNSD
Trigger: GTCGCTATTCTGGGAAACCTTCTTGAGTGCTATGCAAATGTGTTCACAGGCAATGGGGGTGGTCCTGAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR CCA 72 bp ATAACTAGTACATGTTGGCCTTTCACCAGCACTCACTaGCACTCACAGGTGCCTTACATACCTTACGGGGGC +
Preference number: 3 (lower is better)
Translates to: ITSTCWPFTSTH*HSQVPYIPYGG
Trigger: GCCCCCGTAAGGTATGTAAGGCACCTGTGAGTGCCAGTGAGTGCTGGTGAAAGGCCAACATGTACTAGTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR CAA 90 bp ACTCTGGCCCTCACAGAGCGGCAAGTTCATGGGTCACTGGCTCACACTAAATGCATTACCAACAGAGACTaGAAGAAAGGGGCACAAACT +
Preference number: 3 (lower is better)
Translates to: TLALTERQVHGSLAHTKCITNRD*KKGAQT
Trigger: AGTTTGTGCCCCTTTCTTCAAGTCTCTGTTGGTAAT...GCATTTAGTGTGAGCCAGTGACCCATGAACTTGCCGCTCTGTGAGGGCCAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR CAA 90 bp TTGAGCCCCTGGAGCCCTCAGGACCTACTGATAAAGCATGTCCTCTGCAGTATACATGAACTAGGTCCTTaGCTTACCTGCTGTCTCAAC +
Preference number: 3 (lower is better)
Translates to: LSPWSPQDLLIKHVLCSIHELGP*LTCCLN
Trigger: GTTGAGACAGCAGGTAAGCAAAGGACCTAGTTCATG...TATACTGCAGAGGACATGCTTTATCAGTAGGTCCTGAGGGCTCCAGGGGCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR GCA 72 bp TGGAGCCCTCAGGACCTACTGATAAAGCATGTCCTCTaGAGTATACTCAAGAGTCTGCTGCCCTTCAGAAAG +
Preference number: 3 (lower is better)
Translates to: WSPQDLLIKHVL*SILKSLLPFRK
Trigger: CTTTCTGAAGGGCAGCAGACTCTTGAGTATACTGCAGAGGACATGCTTTATCAGTAGGTCCTGAGGGCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR CAA 90 bp ACTGATAAAGCATGTCCTCTGCAGTATACTCAAGAGTCTGCTGCCCTTCAGAAACTGTCTGTGCTTGCTTaGTGCCAAGTGCCCTCAGCT +
Preference number: 3 (lower is better)
Translates to: TDKACPLQYTQESAALQKLSVLA*CQVPSA
Trigger: AGCTGAGGGCACTTGGCACAAAGCAAGCACAGACAG...TTTCTGAAGGGCAGCAGACTCTTGAGTATACTGCAGAGGACATGCTTTATCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR CAA 90 bp TTGAGCCCCTGGAGCCCTCAGGACCTACTGATAAAGCATGTCCTCTGCAGTATAGTCACTGCAGGTAGATaGAGCAAGCTTTTTGTGTTT +
Preference number: 3 (lower is better)
Translates to: LSPWSPQDLLIKHVLCSIVTAGR*SKLFVF
Trigger: AAACACAAAAAGCTTGCTCAATCTACCTGCAGTGAC...TATACTGCAGAGGACATGCTTTATCAGTAGGTCCTGAGGGCTCCAGGGGCTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR CAA 90 bp TTCAGTCCTGTGGACCAAGATAAGGCTATCCCCACAGGCTCTCTCTTCTTCAAAAGCAGAGAAACTGCTTaGCTGACACATAAACCACCC +
Preference number: 3 (lower is better)
Translates to: FSPVDQDKAIPTGSLFFKSRETA*LTHKPP
Trigger: GGGTGGTTTATGTGTCAGCAAAGCAGTTTCTCTGCT...TTTGAAGAAGAGAGAGCCTGTGGGGATAGCCTTATCTTGGTCCACAGGACTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR CAA 90 bp ACTGATAAAGCATGTCCTCTGCAGTATACTCAAGAGTCTGCTGCCCTTCAGAAATCAGGACCACCCCCATaGCCTGTGAACACATTTGCA +
Preference number: 3 (lower is better)
Translates to: TDKACPLQYTQESAALQKSGPPP*PVNTFA
Trigger: TGCAAATGTGTTCACAGGCAATGGGGGTGGTCCTGA...TTTCTGAAGGGCAGCAGACTCTTGAGTATACTGCAGAGGACATGCTTTATCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR CAA 90 bp AGATGGAATTACCAACAGAGACTTGAAGAAAGGGGCACAAACTGTGTGCCTGCGAACCTTTGCCCTTCTTaGTTGGGGAAAAACAGCAAT +
Preference number: 3 (lower is better)
Translates to: RWNYQQRLEERGTNCVPANLCPS*LGKNSN
Trigger: ATTGCTGTTTTTCCCCAACAAAGAAGGGCAAAGGTT...CGCAGGCACACAGTTTGTGCCCCTTTCTTCAAGTCTCTGTTGGTAATTCCATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR TCA 72 bp ATTCCTTGGCATGGATACGTAAGTTCAATGCAGAGGTaGGGGATGCCTTTAACACTGGAAGACAATGCTGAC +
Preference number: 3 (lower is better)
Translates to: IPWHGYVSSMQR*GMPLTLEDNAD
Trigger: GTCAGCATTGTCTTCCAGTGTTAAAGGCATCCCTCACCTCTGCATTGAACTTACGTATCCATGCCAAGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR CCA 72 bp CCTACAAACCACACCAAGAAGAACGTTCTTAACAGATaGCTCACGAGAGACATAAAAGGTTCTGGAAGTGCC +
Preference number: 3 (lower is better)
Translates to: PTNHTKKNVLNR*LTRDIKGSGSA
Trigger: GGCACTTCCAGAACCTTTTATGTCTCTCGTGAGCCATCTGTTAAGAACGTTCTTCTTGGTGTGGTTTGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR CCA 72 bp AAAGCAGACACCAATACTTACATAACTAGTACATGTTaGCCTTTCACCAGCACTCACTGGCACTCACAGGTG +
Preference number: 3 (lower is better)
Translates to: KADTNTYITSTC*PFTSTHWHSQV
Trigger: CACCTGTGAGTGCCAGTGAGTGCTGGTGAAAGGCCAACATGTACTAGTTATGTAAGTATTGGTGTCTGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR CAA 90 bp ACTGATAAAGCATGTCCTCTGCAGTATACTCAAGAGTCTGCTGCCCTTCAGAAAATACAGCTGAAACCTTaGCCCTTCTTTGTTGGGGAA +
Preference number: 3 (lower is better)
Translates to: TDKACPLQYTQESAALQKIQLKP*PFFVGE
Trigger: TTCCCCAACAAAGAAGGGCAAAGGTTTCAGCTGTAT...TTTCTGAAGGGCAGCAGACTCTTGAGTATACTGCAGAGGACATGCTTTATCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR CCA 72 bp GAACCTACTAATCCTGCCAACCATCCACTAAACAGATaGAATTACCAACAGAGACTTGAAGAAAGGGGCACA +
Preference number: 3 (lower is better)
Translates to: EPTNPANHPLNR*NYQQRLEERGT
Trigger: TGTGCCCCTTTCTTCAAGTCTCTGTTGGTAATTCCATCTGTTTAGTGGATGGTTGGCAGGATTAGTAGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR GCA 72 bp ATTTCCTCTCGTTACTGTTGTGTCCCCCAAGACACATaGAAATTATTTCCTAGACCTCATTCATCACAGCCA +
Preference number: 3 (lower is better)
Translates to: ISSRYCCVPQDT*KLFPRPHSSQP
Trigger: TGGCTGTGATGAATGAGGTCTAGGAAATAATTTGCATGTGTCTTGGGGGACACAACAGTAACGAGAGGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR-3UTR CAA 90 bp ACTGGCAACCCACATCAACCCCAAAAGGTTGAAGAATCATCTAAGATATTTCAGTACGTTTCCATTCCTTaGGATTTTGCATATGATGGT +
Preference number: 3 (lower is better)
Translates to: TGNPHQPQKVEESSKIFQYVSIP*DFAYDG
Trigger: ACCATCATATGCAAAATCCAAAGGAATGGAAACGTA...CTGAAATATCTTAGATGATTCTTCAACCTTTTGGGGTTGATGTGGGTTGCCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp CTCAAACCACCACTGCACTGGGAAGAAGACGCACGCTCCTGCCCTAGAGGCCGCGGAGGAGGAGTACGGTaGCACAGCCCCGCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: LKPPLHWEEDARSCPRGRGGGVR*HSPAGG
Trigger: CCCACCAGCGGGGCTGTGCCACCGTACTCCTCCTCC...GCGGCCTCTAGGGCAGGAGCGTGCGTCTTCTTCCCAGTGCAGTGGTGGTTTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR TCA 90 bp CCTGCTGCTGCGCCCAATGGAGGTCCTGTCCTGTCCGGGCAACAGCCAAACTGGTGCCCTAGAGGCCGCTaGAAGGGACCCAGGCCTTAC +
Preference number: 4 (lower is better)
Translates to: PAAAPNGGPVLSGQQPNWCPRGR*KGPRPY
Trigger: GTAAGGCCTGGGTCCCTTTCAGCGGCCTCTAGGGCA...CCAGTTTGGCTGTTGCCCGGACAGGACAGGACCTCCATTGGGCGCAGCAGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp CTCAAACCACCACTGCACTGGGAAGAAGACGCACGCTCCTGCCCTAGAGGCCGCGGCATGCCGTTGGGCTaGACCACCGTGGTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: LKPPLHWEEDARSCPRGRGMPLG*TTVVWW
Trigger: CCACCACACCACGGTGGTGCAGCCCAACGGCATGCC...GCGGCCTCTAGGGCAGGAGCGTGCGTCTTCTTCCCAGTGCAGTGGTGGTTTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp CTCAAACCACCACTGCACTGGGAAGAAGACGCACGCTCCTGCCCTAGAGGCCGCGTAAGTGGGCGTTCCTaGGGCCCGGTACGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: LKPPLHWEEDARSCPRGRVSGRS*GPVRGH
Trigger: GTGCCCACGTACCGGGCCCCAGGAACGCCCACTTAC...GCGGCCTCTAGGGCAGGAGCGTGCGTCTTCTTCCCAGTGCAGTGGTGGTTTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR TCA 90 bp AAATTCCTCTCCCACAATAAACCCTGCCAGCAAACGCACTCCAGCACTGCCTGGCGACCTGGGCCTCAGTaGCCAGCGCACGCCGGCCCG +
Preference number: 4 (lower is better)
Translates to: KFLSHNKPCQQTHSSTAWRPGPQ*PAHAGP
Trigger: CGGGCCGGCGTGCGCTGGTCACTGAGGCCCAGGTCG...CCAGGCAGTGCTGGAGTGCGTTTGCTGGCAGGGTTTATTGTGGGAGAGGAATTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389915.4
CDS-3UTR TCA 90 bp TGCTGCGCCCAATGGAGGTCCTGTCCTGTCCGGGCAACAGCCAAACTGGCGACACACAAACGGCTGGCCTaGGATCTGGCCCAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: CCAQWRSCPVRATAKLATHKRLA*DLAQLP
Trigger: AGGCAGCTGGGCCAGATCTCAGGCCAGCCGTTTGTG...TGTCGCCAGTTTGGCTGTTGCCCGGACAGGACAGGACCTCCATTGGGCGCAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp CCTGCTGCTGCGCCCAATGGAGGTCCTGTCCTGTCCGGGCAACAGCCAAACTGGGTACGTGCCTTGCTGTaGATACGGGCTCTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: PAAAPNGGPVLSGQQPNWVRALL*IRALLG
Trigger: CCCCAGCAGAGCCCGTATGCACAGCAAGGCACGTAC...CCAGTTTGGCTGTTGCCCGGACAGGACAGGACCTCCATTGGGCGCAGCAGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp TGCTGCGCCCAATGGAGGTCCTGTCCTGTCCGGGCAACAGCCAAACTGGCGACAACACCGTTGCAGGCATaGCGTTGGGCTGCACCACCG +
Preference number: 4 (lower is better)
Translates to: CCAQWRSCPVRATAKLATTPLQA*RWAAPP
Trigger: CGGTGGTGCAGCCCAACGGCATGCCTGCAACGGTGT...TGTCGCCAGTTTGGCTGTTGCCCGGACAGGACAGGACCTCCATTGGGCGCAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp CTCAAACCACCACTGCACTGGGAAGAAGACGCACGCTCCTGCCCTAGAGGCCGCCCTGCCACCTGCTGCTaGGCCCAATGGAGGTCCTGT +
Preference number: 4 (lower is better)
Translates to: LKPPLHWEEDARSCPRGRPATCC*AQWRSC
Trigger: ACAGGACCTCCATTGGGCGCAGCAGCAGGTGGCAGG...GCGGCCTCTAGGGCAGGAGCGTGCGTCTTCTTCCCAGTGCAGTGGTGGTTTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp CCAGAGCCCACAGCACTCAAACCACCACTGCACTGGGAAGAAGACGCACGCTCCCTCAAGCCACACCCCTaGCACCTGCTGCTGCGCCCA +
Preference number: 4 (lower is better)
Translates to: PEPTALKPPLHWEEDARSLKPHP*HLLLRP
Trigger: TGGGCGCAGCAGCAGGTGGCAGGGGTGTGGCTTGAG...GGAGCGTGCGTCTTCTTCCCAGTGCAGTGGTGGTTTGAGTGCTGTGGGCTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp TGCTGCGCCCAATGGAGGTCCTGTCCTGTCCGGGCAACAGCCAAACTGGCGACAGTGGCACAGCCCCGCTaGTGGGGGAACAGGACACTT +
Preference number: 4 (lower is better)
Translates to: CCAQWRSCPVRATAKLATVAQPR*WGNRTL
Trigger: AAGTGTCCTGTTCCCCCACCAGCGGGGCTGTGCCAC...TGTCGCCAGTTTGGCTGTTGCCCGGACAGGACAGGACCTCCATTGGGCGCAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR TCA 90 bp TGCTGCGCCCAATGGAGGTCCTGTCCTGTCCGGGCAACAGCCAAACTGGCGACATCAGGCCCATTACCATaGCTGGCCCTGACTCTGGCC +
Preference number: 4 (lower is better)
Translates to: CCAQWRSCPVRATAKLATSGPLP*LALTLA
Trigger: GGCCAGAGTCAGGGCCAGTCATGGTAATGGGCCTGA...TGTCGCCAGTTTGGCTGTTGCCCGGACAGGACAGGACCTCCATTGGGCGCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp TGCTGCGCCCAATGGAGGTCCTGTCCTGTCCGGGCAACAGCCAAACTGGCGACAAGCAGGGTACACCGTTaGAGGCATGCCGTTGGGCTG +
Preference number: 4 (lower is better)
Translates to: CCAQWRSCPVRATAKLATSRVHR*RHAVGL
Trigger: CAGCCCAACGGCATGCCTGCAACGGTGTACCCTGCT...TGTCGCCAGTTTGGCTGTTGCCCGGACAGGACAGGACCTCCATTGGGCGCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp CGGCCTCAGCAGACAAGTCACCACCATCAGGTGGGTGATCCCAGAAGCAGCTACCTCACTGGGCGCCAGTaGCCTGACCCAGCTACCAGC +
Preference number: 4 (lower is better)
Translates to: RPQQTSHHHQVGDPRSSYLTGRQ*PDPATS
Trigger: GCTGGTAGCTGGGTCAGGGCACTGGCGCCCAGTGAG...GTAGCTGCTTCTGGGATCACCCACCTGATGGTGGTGACTTGTCTGCTGAGGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp TGCTGCGCCCAATGGAGGTCCTGTCCTGTCCGGGCAACAGCCAAACTGGCGACACCTTGCCCACTGGTCTaGACAGGGACTCATGGGCAC +
Preference number: 4 (lower is better)
Translates to: CCAQWRSCPVRATAKLATPCPLV*TGTHGH
Trigger: GTGCCCATGAGTCCCTGTGCAGACCAGTGGGCAAGG...TGTCGCCAGTTTGGCTGTTGCCCGGACAGGACAGGACCTCCATTGGGCGCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp GGTCACTGGCTCACACTAAATGCTCAGCCGCCAGCACAGATCCAAACAAGACCTGGCCCGCGGCGGGCTTaGCCGTGGGGCGAAACAAGG +
Preference number: 4 (lower is better)
Translates to: GHWLTLNAQPPAQIQTRPGPRRA*PWGETR
Trigger: CCTTGTTTCGCCCCACGGCCAAGCCCGCCGCGGGCC...AGGTCTTGTTTGGATCTGTGCTGGCGGCTGAGCATTTAGTGTGAGCCAGTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389915.4
CDS-3UTR CCA 90 bp AGAAAGGGGCACAAACTGTGTGCCTGCGGTAAATGTCTGCCCCCACACATAGACGCCGCGGCGGCGACCTaGGCCTCAGTGACCAGCGCA +
Preference number: 4 (lower is better)
Translates to: RKGHKLCACGKCLPPHIDAAAAT*ASVTSA
Trigger: TGCGCTGGTCACTGAGGCCCAGGTCGCCGCCGCGGC...GTCTATGTGTGGGGGCAGACATTTACCGCAGGCACACAGTTTGTGCCCCTTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389915.4
CDS-3UTR CCA 90 bp GAGCGGCAAGTTCATGGGTCACTGGCTCACACTAAATGCTCAGCCGCCAGCACAGGAGGAGGAGTACGGTaGCACAGCCCCGCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: ERQVHGSLAHTKCSAASTGGGVR*HSPAGG
Trigger: CCCACCAGCGGGGCTGTGCCACCGTACTCCTCCTCC...TGTGCTGGCGGCTGAGCATTTAGTGTGAGCCAGTGACCCATGAACTTGCCGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp CTCAAACCACCACTGCACTGGGAAGAAGACGCACGCTCCTGCCCTAGAGGCCGCTTGCAGGCATGCCGTTaGGCTGCACCACCGTGGTGT +
Preference number: 4 (lower is better)
Translates to: LKPPLHWEEDARSCPRGRLQACR*AAPPWC
Trigger: ACACCACGGTGGTGCAGCCCAACGGCATGCCTGCAA...GCGGCCTCTAGGGCAGGAGCGTGCGTCTTCTTCCCAGTGCAGTGGTGGTTTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp CTCAAACCACCACTGCACTGGGAAGAAGACGCACGCTCCTGCCCTAGAGGCCGCGGTCAGTTGAGCCCCTaGAGCCCTCAGGACCTACTG +
Preference number: 4 (lower is better)
Translates to: LKPPLHWEEDARSCPRGRGQLSP*SPQDLL
Trigger: CAGTAGGTCCTGAGGGCTCCAGGGGCTCAACTGACC...GCGGCCTCTAGGGCAGGAGCGTGCGTCTTCTTCCCAGTGCAGTGGTGGTTTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR TCA 90 bp CCTGCTGCTGCGCCCAATGGAGGTCCTGTCCTGTCCGGGCAACAGCCAAACTGGAGCTGTCGGATAAGGTaGAGGTGGCCCAACTGCTCA +
Preference number: 4 (lower is better)
Translates to: PAAAPNGGPVLSGQQPNWSCRIR*RWPNCS
Trigger: TGAGCAGTTGGGCCACCTTCACCTTATCCGACAGCT...CCAGTTTGGCTGTTGCCCGGACAGGACAGGACCTCCATTGGGCGCAGCAGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR TCA 90 bp CGGCCTCAGCAGACAAGTCACCACCATCAGGTGGGTGATCCCAGAAGCAGCTACCACAAACGGCTGGCCTaGGATCTGGCCCAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: RPQQTSHHHQVGDPRSSYHKRLA*DLAQLP
Trigger: AGGCAGCTGGGCCAGATCTCAGGCCAGCCGTTTGTG...GTAGCTGCTTCTGGGATCACCCACCTGATGGTGGTGACTTGTCTGCTGAGGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp CTCAAACCACCACTGCACTGGGAAGAAGACGCACGCTCCTGCCCTAGAGGCCGCGGCAGGAGCTGCTGCTaGATAGCCCATGGGAAAACC +
Preference number: 4 (lower is better)
Translates to: LKPPLHWEEDARSCPRGRGRSCC*IAHGKT
Trigger: GGTTTTCCCATGGGCTATGCAGCAGCAGCTCCTGCC...GCGGCCTCTAGGGCAGGAGCGTGCGTCTTCTTCCCAGTGCAGTGGTGGTTTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp TGGCCCAGCTGCCTTGCCCACTGGTCTGCACAGGGACTCATGGGCACAGCCTGTGACGTGAGGAGGTGCTaGATACAGCGGCTGTGTGTA +
Preference number: 4 (lower is better)
Translates to: WPSCLAHWSAQGLMGTACDVRRC*IQRLCV
Trigger: TACACACAGCCGCTGTATGCAGCACCTCCTCACGTC...ACAGGCTGTGCCCATGAGTCCCTGTGCAGACCAGTGGGCAAGGCAGCTGGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp GAGCGGCAAGTTCATGGGTCACTGGCTCACACTAAATGCTCAGCCGCCAGCACACACACCCCTGCCACCTaGTGCTGCGCCCAATGGAGG +
Preference number: 4 (lower is better)
Translates to: ERQVHGSLAHTKCSAASTHTPAT*CCAQWR
Trigger: CCTCCATTGGGCGCAGCAGCAGGTGGCAGGGGTGTG...TGTGCTGGCGGCTGAGCATTTAGTGTGAGCCAGTGACCCATGAACTTGCCGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp GAGCGGCAAGTTCATGGGTCACTGGCTCACACTAAATGCTCAGCCGCCAGCACACTCAAGCCACACCCCTaGCACCTGCTGCTGCGCCCA +
Preference number: 4 (lower is better)
Translates to: ERQVHGSLAHTKCSAASTLKPHP*HLLLRP
Trigger: TGGGCGCAGCAGCAGGTGGCAGGGGTGTGGCTTGAG...TGTGCTGGCGGCTGAGCATTTAGTGTGAGCCAGTGACCCATGAACTTGCCGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp CCTGCTGCTGCGCCCAATGGAGGTCCTGTCCTGTCCGGGCAACAGCCAAACTGGGTCACCACCATCAGGTaGGTGATCCCAGAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: PAAAPNGGPVLSGQQPNWVTTIR*VIPEAA
Trigger: AGCTGCTTCTGGGATCACCCACCTGATGGTGGTGAC...CCAGTTTGGCTGTTGCCCGGACAGGACAGGACCTCCATTGGGCGCAGCAGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR TCA 90 bp CCTGCTGCTGCGCCCAATGGAGGTCCTGTCCTGTCCGGGCAACAGCCAAACTGGGAATCCCCAATAATGTaGCTGCACAGCTCCGTCCTC +
Preference number: 4 (lower is better)
Translates to: PAAAPNGGPVLSGQQPNWESPIM*LHSSVL
Trigger: GAGGACGGAGCTGTGCAGTCACATTATTGGGGATTC...CCAGTTTGGCTGTTGCCCGGACAGGACAGGACCTCCATTGGGCGCAGCAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR TCA 90 bp CCAGAGCCCACAGCACTCAAACCACCACTGCACTGGGAAGAAGACGCACGCTCCCCACCATCAGGTGGGTaGTCCCAGAAGCAGCTACAG +
Preference number: 4 (lower is better)
Translates to: PEPTALKPPLHWEEDARSPPSGG*SQKQLQ
Trigger: CTGTAGCTGCTTCTGGGATCACCCACCTGATGGTGG...GGAGCGTGCGTCTTCTTCCCAGTGCAGTGGTGGTTTGAGTGCTGTGGGCTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR TCA 90 bp CAGCACTCACTGGCACTCACAGGTGCCTTACATACCTTACGGGGGCCAACACTGTGGGCGCCAGTGCCCTaGCCCAGCTACCAGCAAATG +
Preference number: 4 (lower is better)
Translates to: QHSLALTGALHTLRGPTLWAPVP*PSYQQM
Trigger: CATTTGCTGGTAGCTGGGTCAGGGCACTGGCGCCCA...CAGTGTTGGCCCCCGTAAGGTATGTAAGGCACCTGTGAGTGCCAGTGAGTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp CCAGAGCCCACAGCACTCAAACCACCACTGCACTGGGAAGAAGACGCACGCTCCCGTGCCGAGGAGACCTaGTACGATAAGAGGCTGACC +
Preference number: 4 (lower is better)
Translates to: PEPTALKPPLHWEEDARSRAEET*YDKRLT
Trigger: GGTCAGCCTCTTATCGTAGCAGGTCTCCTCGGCACG...GGAGCGTGCGTCTTCTTCCCAGTGCAGTGGTGGTTTGAGTGCTGTGGGCTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389915.4
CDS-3UTR GCA 90 bp CCAGAGCCCACAGCACTCAAACCACCACTGCACTGGGAAGAAGACGCACGCTCCGGCAGGAGCTGCTGCTaGATAGCCCATGGGAAAACC +
Preference number: 4 (lower is better)
Translates to: PEPTALKPPLHWEEDARSGRSCC*IAHGKT
Trigger: GGTTTTCCCATGGGCTATGCAGCAGCAGCTCCTGCC...GGAGCGTGCGTCTTCTTCCCAGTGCAGTGGTGGTTTGAGTGCTGTGGGCTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp CTCAAACCACCACTGCACTGGGAAGAAGACGCACGCTCCTGCCCTAGAGGCCGCAGAATAGGCAGGAGCTaGTGCTGCATAGCCCATGGG +
Preference number: 4 (lower is better)
Translates to: LKPPLHWEEDARSCPRGRRIGRS*CCIAHG
Trigger: CCCATGGGCTATGCAGCAGCAGCTCCTGCCTATTCT...GCGGCCTCTAGGGCAGGAGCGTGCGTCTTCTTCCCAGTGCAGTGGTGGTTTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp CGGCCTCAGCAGACAAGTCACCACCATCAGGTGGGTGATCCCAGAAGCAGCTACCACTCACTGACCAGGTaGCCACCCCAAGGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: RPQQTSHHHQVGDPRSSYHSLTR*PPQGSG
Trigger: TCCTGAGCCTTGGGGTGGGCACCTGGTCAGTGAGTG...GTAGCTGCTTCTGGGATCACCCACCTGATGGTGGTGACTTGTCTGCTGAGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp GAGCGGCAAGTTCATGGGTCACTGGCTCACACTAAATGCTCAGCCGCCAGCACACCTGCCACCTGCTGCTaGGCCCAATGGAGGTCCTGT +
Preference number: 4 (lower is better)
Translates to: ERQVHGSLAHTKCSAASTPATCC*AQWRSC
Trigger: ACAGGACCTCCATTGGGCGCAGCAGCAGGTGGCAGG...TGTGCTGGCGGCTGAGCATTTAGTGTGAGCCAGTGACCCATGAACTTGCCGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp CCAGAGCCCACAGCACTCAAACCACCACTGCACTGGGAAGAAGACGCACGCTCCGAAGAAAGTCCTGGTTaGAGGCGCAAGGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PEPTALKPPLHWEEDARSEESPG*RRKACS
Trigger: GCTGCAGGCCTTGCGCCTCCAACCAGGACTTTCTTC...GGAGCGTGCGTCTTCTTCCCAGTGCAGTGGTGGTTTGAGTGCTGTGGGCTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp CGGCCTCAGCAGACAAGTCACCACCATCAGGTGGGTGATCCCAGAAGCAGCTACCACTCCAGCACTGCCTaGCCCTCTCTGCTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: RPQQTSHHHQVGDPRSSYHSSTA*PSLLSV
Trigger: CACAGACAGCAGAGAGGGCCAGGCAGTGCTGGAGTG...GTAGCTGCTTCTGGGATCACCCACCTGATGGTGGTGACTTGTCTGCTGAGGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp TGCTGCGCCCAATGGAGGTCCTGTCCTGTCCGGGCAACAGCCAAACTGGCGACAGATGTAAATGGCGTGTaGGGGGTGCAGCCCACTCTT +
Preference number: 4 (lower is better)
Translates to: CCAQWRSCPVRATAKLATDVNGV*GVQPTL
Trigger: AAGAGTGGGCTGCACCCCCCACACGCCATTTACATC...TGTCGCCAGTTTGGCTGTTGCCCGGACAGGACAGGACCTCCATTGGGCGCAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp CAGCACTCACTGGCACTCACAGGTGCCTTACATACCTTACGGGGGCCAACACTGTGCTGCTGCGCCCAATaGAGGTCCTGTCCTGTCCGG +
Preference number: 4 (lower is better)
Translates to: QHSLALTGALHTLRGPTLCCCAQ*RSCPVR
Trigger: CCGGACAGGACAGGACCTCCATTGGGCGCAGCAGCA...CAGTGTTGGCCCCCGTAAGGTATGTAAGGCACCTGTGAGTGCCAGTGAGTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp CCAGAGCCCACAGCACTCAAACCACCACTGCACTGGGAAGAAGACGCACGCTCCAGCTGCCTTGCCCACTaGTCTGCACAGGGACTCATG +
Preference number: 4 (lower is better)
Translates to: PEPTALKPPLHWEEDARSSCLAH*SAQGLM
Trigger: CATGAGTCCCTGTGCAGACCAGTGGGCAAGGCAGCT...GGAGCGTGCGTCTTCTTCCCAGTGCAGTGGTGGTTTGAGTGCTGTGGGCTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR TCA 90 bp CGGCCTCAGCAGACAAGTCACCACCATCAGGTGGGTGATCCCAGAAGCAGCTACTGTTACTTGGTCAGTTaGGCCCCTGGAGCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: RPQQTSHHHQVGDPRSSYCYLVS*APGALR
Trigger: CCTGAGGGCTCCAGGGGCTCAACTGACCAAGTAACA...GTAGCTGCTTCTGGGATCACCCACCTGATGGTGGTGACTTGTCTGCTGAGGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp CCAGAGCCCACAGCACTCAAACCACCACTGCACTGGGAAGAAGACGCACGCTCCGAGCAAGGTACTGTATaGCCAGCTGGGGAAGGGCAA +
Preference number: 4 (lower is better)
Translates to: PEPTALKPPLHWEEDARSEQGTV*PAGEGQ
Trigger: TTGCCCTTCCCCAGCTGGGCATACAGTACCTTGCTC...GGAGCGTGCGTCTTCTTCCCAGTGCAGTGGTGGTTTGAGTGCTGTGGGCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp GAGCGGCAAGTTCATGGGTCACTGGCTCACACTAAATGCTCAGCCGCCAGCACAAGGAGGACCAGACGCTaGCACCCACCTCAAGCCACA +
Preference number: 4 (lower is better)
Translates to: ERQVHGSLAHTKCSAASTRRTRR*HPPQAT
Trigger: TGTGGCTTGAGGTGGGTGGCAGCGTCTGGTCCTCCT...TGTGCTGGCGGCTGAGCATTTAGTGTGAGCCAGTGACCCATGAACTTGCCGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp CAGCACTCACTGGCACTCACAGGTGCCTTACATACCTTACGGGGGCCAACACTGAGGAGGACCAGACGCTaGCACCCACCTCAAGCCACA +
Preference number: 4 (lower is better)
Translates to: QHSLALTGALHTLRGPTLRRTRR*HPPQAT
Trigger: TGTGGCTTGAGGTGGGTGGCAGCGTCTGGTCCTCCT...CAGTGTTGGCCCCCGTAAGGTATGTAAGGCACCTGTGAGTGCCAGTGAGTGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp GTCCATGAACCAGCTGCACCCAAGCAGCTGTGGCTTCCCTACTCTCTCCCAAACTTGCAGGCATGCCGTTaGGCTGCACCACCGTGGTGT +
Preference number: 4 (lower is better)
Translates to: VHEPAAPKQLWLPYSLPNLQACR*AAPPWC
Trigger: ACACCACGGTGGTGCAGCCCAACGGCATGCCTGCAA...GTTTGGGAGAGAGTAGGGAAGCCACAGCTGCTTGGGTGCAGCTGGTTCATGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp CCAGAGCCCACAGCACTCAAACCACCACTGCACTGGGAAGAAGACGCACGCTCCAAACCACCACTGCACTaGGAAGAAGACGCACGCTCC +
Preference number: 4 (lower is better)
Translates to: PEPTALKPPLHWEEDARSKPPLH*EEDARS
Trigger: GGAGCGTGCGTCTTCTTCCCAGTGCAGTGGTGGTTT...GGAGCGTGCGTCTTCTTCCCAGTGCAGTGGTGGTTTGAGTGCTGTGGGCTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp CTCAAACCACCACTGCACTGGGAAGAAGACGCACGCTCCTGCCCTAGAGGCCGCTACTGTATGCCCAGCTaGGGAAGGGCAAGACACTCA +
Preference number: 4 (lower is better)
Translates to: LKPPLHWEEDARSCPRGRYCMPS*GRARHS
Trigger: TGAGTGTCTTGCCCTTCCCCAGCTGGGCATACAGTA...GCGGCCTCTAGGGCAGGAGCGTGCGTCTTCTTCCCAGTGCAGTGGTGGTTTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp GAGCGGCAAGTTCATGGGTCACTGGCTCACACTAAATGCTCAGCCGCCAGCACAGGTCAGTTGAGCCCCTaGAGCCCTCAGGACCTACTG +
Preference number: 4 (lower is better)
Translates to: ERQVHGSLAHTKCSAASTGQLSP*SPQDLL
Trigger: CAGTAGGTCCTGAGGGCTCCAGGGGCTCAACTGACC...TGTGCTGGCGGCTGAGCATTTAGTGTGAGCCAGTGACCCATGAACTTGCCGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR TCA 90 bp GGTCACTGGCTCACACTAAATGCTCAGCCGCCAGCACAGATCCAAACAAGACCTTGGGCGCCAGTGCCCTaGCCCAGCTACCAGCAAATG +
Preference number: 4 (lower is better)
Translates to: GHWLTLNAQPPAQIQTRPWAPVP*PSYQQM
Trigger: CATTTGCTGGTAGCTGGGTCAGGGCACTGGCGCCCA...AGGTCTTGTTTGGATCTGTGCTGGCGGCTGAGCATTTAGTGTGAGCCAGTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR TCA 90 bp CACCAGAAAGAGCAAGGTACTGTATGCCCAGCTGGGGAAGGGCAAGACACTCACTACCATGACTGGCCCTaGCTCTGGCCCTCACAGAGC +
Preference number: 4 (lower is better)
Translates to: HQKEQGTVCPAGEGQDTHYHDWP*LWPSQS
Trigger: GCTCTGTGAGGGCCAGAGTCAGGGCCAGTCATGGTA...GTGAGTGTCTTGCCCTTCCCCAGCTGGGCATACAGTACCTTGCTCTTTCTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR TCA 90 bp ACTCTGGCCCTCACAGAGCGGCAAGTTCATGGGTCACTGGCTCACACTAAATGCTACCATGACTGGCCCTaGCTCTGGCCCTCACAGAGC +
Preference number: 4 (lower is better)
Translates to: TLALTERQVHGSLAHTKCYHDWP*LWPSQS
Trigger: GCTCTGTGAGGGCCAGAGTCAGGGCCAGTCATGGTA...GCATTTAGTGTGAGCCAGTGACCCATGAACTTGCCGCTCTGTGAGGGCCAGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp CTAAGTGTCGAGAGCATTAAGAAGAAAGTCCTGGTTGGAGGCGCAAGGCCTGCACTCACTGGGCGCCAGTaGCCTGACCCAGCTACCAGC +
Preference number: 4 (lower is better)
Translates to: LSVESIKKKVLVGGARPALTGRQ*PDPATS
Trigger: GCTGGTAGCTGGGTCAGGGCACTGGCGCCCAGTGAG...TGCAGGCCTTGCGCCTCCAACCAGGACTTTCTTCTTAATGCTCTCGACACTTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp CCAGAGCCCACAGCACTCAAACCACCACTGCACTGGGAAGAAGACGCACGCTCCCACAAACTGTGTGCCTaGGGTAAATGTCTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: PEPTALKPPLHWEEDARSHKLCA*GKCLPP
Trigger: TGGGGGCAGACATTTACCGCAGGCACACAGTTTGTG...GGAGCGTGCGTCTTCTTCCCAGTGCAGTGGTGGTTTGAGTGCTGTGGGCTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp CCAGAGCCCACAGCACTCAAACCACCACTGCACTGGGAAGAAGACGCACGCTCCACTGGCACTCACAGGTaGCTTACATACCTTACGGGG +
Preference number: 4 (lower is better)
Translates to: PEPTALKPPLHWEEDARSTGTHR*LTYLTG
Trigger: CCCCGTAAGGTATGTAAGGCACCTGTGAGTGCCAGT...GGAGCGTGCGTCTTCTTCCCAGTGCAGTGGTGGTTTGAGTGCTGTGGGCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp TGGTCAGCTGAACCCCTGGAACCGTTAGAACCTACTAATCCTGCCAACCATCCACACACCCCTGCCACCTaGTGCTGCGCCCAATGGAGG +
Preference number: 4 (lower is better)
Translates to: WSAEPLEPLEPTNPANHPHTPAT*CCAQWR
Trigger: CCTCCATTGGGCGCAGCAGCAGGTGGCAGGGGTGTG...TGGATGGTTGGCAGGATTAGTAGGTTCTAACGGTTCCAGGGGTTCAGCTGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp ACCCCAAGGCTCAGGACCACCCCCATTGCCTGTGAACACATTTGCATAGCACTCGAGGGGAGAAATACGTaGTCTGCCTTCCCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: TPRLRTTPIACEHICIALEGRNT*SAFPQA
Trigger: GGCCTGGGGGAAGGCAGAGCACGTATTTCTCCCCTC...GAGTGCTATGCAAATGTGTTCACAGGCAATGGGGGTGGTCCTGAGCCTTGGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp CAGCACTCACTGGCACTCACAGGTGCCTTACATACCTTACGGGGGCCAACACTGAGGAGACACCTGTCATaGCAGTCCTGGGAGCACACC +
Preference number: 4 (lower is better)
Translates to: QHSLALTGALHTLRGPTLRRHLS*QSWEHT
Trigger: GGTGTGCTCCCAGGACTGGCATGACAGGTGTCTCCT...CAGTGTTGGCCCCCGTAAGGTATGTAAGGCACCTGTGAGTGCCAGTGAGTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp CTCAAACCACCACTGCACTGGGAAGAAGACGCACGCTCCTGCCCTAGAGGCCGCCTGCTGCATAGCCCATaGGAAAACCAGCTGGATAAC +
Preference number: 4 (lower is better)
Translates to: LKPPLHWEEDARSCPRGRLLHSP*ENQLDN
Trigger: GTTATCCAGCTGGTTTTCCCATGGGCTATGCAGCAG...GCGGCCTCTAGGGCAGGAGCGTGCGTCTTCTTCCCAGTGCAGTGGTGGTTTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp ACCCCAAGGCTCAGGACCACCCCCATTGCCTGTGAACACATTTGCATAGCACTCGCACAGCCCCGCTGGTaGGGGAACAGGACACTTTGT +
Preference number: 4 (lower is better)
Translates to: TPRLRTTPIACEHICIALAQPRW*GNRTLC
Trigger: ACAAAGTGTCCTGTTCCCCCACCAGCGGGGCTGTGC...GAGTGCTATGCAAATGTGTTCACAGGCAATGGGGGTGGTCCTGAGCCTTGGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp AGAAAGGGGCACAAACTGTGTGCCTGCGGTAAATGTCTGCCCCCACACATAGACGTGGCACAGCCCCGCTaGTGGGGGAACAGGACACTT +
Preference number: 4 (lower is better)
Translates to: RKGHKLCACGKCLPPHIDVAQPR*WGNRTL
Trigger: AAGTGTCCTGTTCCCCCACCAGCGGGGCTGTGCCAC...GTCTATGTGTGGGGGCAGACATTTACCGCAGGCACACAGTTTGTGCCCCTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp CACCAGAAAGAGCAAGGTACTGTATGCCCAGCTGGGGAAGGGCAAGACACTCACACCCACAGAGTCAGCTaGAGACTAACGGCGCTGGGG +
Preference number: 4 (lower is better)
Translates to: HQKEQGTVCPAGEGQDTHTHRVS*RLTALG
Trigger: CCCCAGCGCCGTTAGTCTCCAGCTGACTCTGTGGGT...GTGAGTGTCTTGCCCTTCCCCAGCTGGGCATACAGTACCTTGCTCTTTCTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp ACTCTGGCCCTCACAGAGCGGCAAGTTCATGGGTCACTGGCTCACACTAAATGCACCCACAGAGTCAGCTaGAGACTAACGGCGCTGGGG +
Preference number: 4 (lower is better)
Translates to: TLALTERQVHGSLAHTKCTHRVS*RLTALG
Trigger: CCCCAGCGCCGTTAGTCTCCAGCTGACTCTGTGGGT...GCATTTAGTGTGAGCCAGTGACCCATGAACTTGCCGCTCTGTGAGGGCCAGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp TGCTGCGCCCAATGGAGGTCCTGTCCTGTCCGGGCAACAGCCAAACTGGCGACACCAAACTGGCGACAATaGACACATCCAACAGTCAGC +
Preference number: 4 (lower is better)
Translates to: CCAQWRSCPVRATAKLATPNWRQ*THPTVS
Trigger: GCTGACTGTTGGATGTGTCCATTGTCGCCAGTTTGG...TGTCGCCAGTTTGGCTGTTGCCCGGACAGGACAGGACCTCCATTGGGCGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp AGAAAGGGGCACAAACTGTGTGCCTGCGGTAAATGTCTGCCCCCACACATAGACTGCTGCTGCGCCCAATaGAGGTCCTGTCCTGTCCGG +
Preference number: 4 (lower is better)
Translates to: RKGHKLCACGKCLPPHIDCCCAQ*RSCPVR
Trigger: CCGGACAGGACAGGACCTCCATTGGGCGCAGCAGCA...GTCTATGTGTGGGGGCAGACATTTACCGCAGGCACACAGTTTGTGCCCCTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp GAGCGGCAAGTTCATGGGTCACTGGCTCACACTAAATGCTCAGCCGCCAGCACAAGCTGCCTTGCCCACTaGTCTGCACAGGGACTCATG +
Preference number: 4 (lower is better)
Translates to: ERQVHGSLAHTKCSAASTSCLAH*SAQGLM
Trigger: CATGAGTCCCTGTGCAGACCAGTGGGCAAGGCAGCT...TGTGCTGGCGGCTGAGCATTTAGTGTGAGCCAGTGACCCATGAACTTGCCGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp ACCCCAAGGCTCAGGACCACCCCCATTGCCTGTGAACACATTTGCATAGCACTCAGGAGCACAAACGGCTaGCCTGAGATCTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: TPRLRTTPIACEHICIALRSTNG*PEIWPS
Trigger: GCTGGGCCAGATCTCAGGCCAGCCGTTTGTGCTCCT...GAGTGCTATGCAAATGTGTTCACAGGCAATGGGGGTGGTCCTGAGCCTTGGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR TCA 90 bp TTGAGCCCCTGGAGCCCTCAGGACCTACTGATAAAGCATGTCCTCTGCAGTATACAGCAGGGTACCTGCTaGCATGGCCATGGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: LSPWSPQDLLIKHVLCSIQQGTC*HGHGGP
Trigger: GGGACCACCATGGCCATGTCAGCAGGTACCCTGCTG...TATACTGCAGAGGACATGCTTTATCAGTAGGTCCTGAGGGCTCCAGGGGCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR TCA 90 bp GGTCACTGGCTCACACTAAATGCTCAGCCGCCAGCACAGATCCAAACAAGACCTTCAGGCCCATTACCATaGCTGGCCCTGACTCTGGCC +
Preference number: 4 (lower is better)
Translates to: GHWLTLNAQPPAQIQTRPSGPLP*LALTLA
Trigger: GGCCAGAGTCAGGGCCAGTCATGGTAATGGGCCTGA...AGGTCTTGTTTGGATCTGTGCTGGCGGCTGAGCATTTAGTGTGAGCCAGTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR TCA 90 bp TTGAGCCCCTGGAGCCCTCAGGACCTACTGATAAAGCATGTCCTCTGCAGTATAGGGCAAGACACTCACTaGCCAGGTGCCCACCCCAAG +
Preference number: 4 (lower is better)
Translates to: LSPWSPQDLLIKHVLCSIGQDTH*PGAHPK
Trigger: CTTGGGGTGGGCACCTGGTCAGTGAGTGTCTTGCCC...TATACTGCAGAGGACATGCTTTATCAGTAGGTCCTGAGGGCTCCAGGGGCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR TCA 90 bp CTAAGTGTCGAGAGCATTAAGAAGAAAGTCCTGGTTGGAGGCGCAAGGCCTGCAGGGCAAGACACTCACTaGCCAGGTGCCCACCCCAAG +
Preference number: 4 (lower is better)
Translates to: LSVESIKKKVLVGGARPAGQDTH*PGAHPK
Trigger: CTTGGGGTGGGCACCTGGTCAGTGAGTGTCTTGCCC...TGCAGGCCTTGCGCCTCCAACCAGGACTTTCTTCTTAATGCTCTCGACACTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR TCA 90 bp TGCTGCGCCCAATGGAGGTCCTGTCCTGTCCGGGCAACAGCCAAACTGGCGACATTCATCACAGCCAGATaGTGCCACCAGAAAGAGCAA +
Preference number: 4 (lower is better)
Translates to: CCAQWRSCPVRATAKLATFITAR*CHQKEQ
Trigger: TTGCTCTTTCTGGTGGCATCATCTGGCTGTGATGAA...TGTCGCCAGTTTGGCTGTTGCCCGGACAGGACAGGACCTCCATTGGGCGCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR TCA 90 bp GTCCATGAACCAGCTGCACCCAAGCAGCTGTGGCTTCCCTACTCTCTCCCAAACTACGGGGGCCAACACTaGCAGGTATTAGTACGTCGC +
Preference number: 4 (lower is better)
Translates to: VHEPAAPKQLWLPYSLPNYGGQH*QVLVRR
Trigger: GCGACGTACTAATACCTGTCAGTGTTGGCCCCCGTA...GTTTGGGAGAGAGTAGGGAAGCCACAGCTGCTTGGGTGCAGCTGGTTCATGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR TCA 90 bp CGGCCTCAGCAGACAAGTCACCACCATCAGGTGGGTGATCCCAGAAGCAGCTACTCTCCCCTTCCCAAGTaGCTTCACTTCAGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: RPQQTSHHHQVGDPRSSYSPLPK*LHFSPV
Trigger: CACAGGACTGAAGTGAAGTCACTTGGGAAGGGGAGA...GTAGCTGCTTCTGGGATCACCCACCTGATGGTGGTGACTTGTCTGCTGAGGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR TCA 90 bp AAATTCCTCTCCCACAATAAACCCTGCCAGCAAACGCACTCCAGCACTGCCTGGGGGCACAGCCTGTGGTaGGGAGGAGACACCTGTCAT +
Preference number: 4 (lower is better)
Translates to: KFLSHNKPCQQTHSSTAWGHSLW*GGDTCH
Trigger: ATGACAGGTGTCTCCTCCTCACCACAGGCTGTGCCC...CCAGGCAGTGCTGGAGTGCGTTTGCTGGCAGGGTTTATTGTGGGAGAGGAATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR TCA 90 bp GGTCACTGGCTCACACTAAATGCTCAGCCGCCAGCACAGATCCAAACAAGACCTGGGCACAGCCTGTGGTaGGGAGGAGACACCTGTCAT +
Preference number: 4 (lower is better)
Translates to: GHWLTLNAQPPAQIQTRPGHSLW*GGDTCH
Trigger: ATGACAGGTGTCTCCTCCTCACCACAGGCTGTGCCC...AGGTCTTGTTTGGATCTGTGCTGGCGGCTGAGCATTTAGTGTGAGCCAGTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp GTCCATGAACCAGCTGCACCCAAGCAGCTGTGGCTTCCCTACTCTCTCCCAAACGACGTGAGGAGGTGCTaGATACAGCGGCTGTGTGTA +
Preference number: 4 (lower is better)
Translates to: VHEPAAPKQLWLPYSLPNDVRRC*IQRLCV
Trigger: TACACACAGCCGCTGTATGCAGCACCTCCTCACGTC...GTTTGGGAGAGAGTAGGGAAGCCACAGCTGCTTGGGTGCAGCTGGTTCATGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp CGGCCTCAGCAGACAAGTCACCACCATCAGGTGGGTGATCCCAGAAGCAGCTACTCTGCTGTCTGTGCTTaGTTTGTGCCAAGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: RPQQTSHHHQVGDPRSSYSAVCA*FVPSAL
Trigger: GAGGGCACTTGGCACAAAGCAAGCACAGACAGCAGA...GTAGCTGCTTCTGGGATCACCCACCTGATGGTGGTGACTTGTCTGCTGAGGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp GTCCATGAACCAGCTGCACCCAAGCAGCTGTGGCTTCCCTACTCTCTCCCAAACGAGCAAGGTACTGTATaGCCAGCTGGGGAAGGGCAA +
Preference number: 4 (lower is better)
Translates to: VHEPAAPKQLWLPYSLPNEQGTV*PAGEGQ
Trigger: TTGCCCTTCCCCAGCTGGGCATACAGTACCTTGCTC...GTTTGGGAGAGAGTAGGGAAGCCACAGCTGCTTGGGTGCAGCTGGTTCATGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp CCAGAGCCCACAGCACTCAAACCACCACTGCACTGGGAAGAAGACGCACGCTCCTACTCAAGAGTCTGCTaGCCTTCAGAAAGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: PEPTALKPPLHWEEDARSYSRVC*PSESQR
Trigger: CCTCTGGCTTTCTGAAGGGCAGCAGACTCTTGAGTA...GGAGCGTGCGTCTTCTTCCCAGTGCAGTGGTGGTTTGAGTGCTGTGGGCTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp CACCAGAAAGAGCAAGGTACTGTATGCCCAGCTGGGGAAGGGCAAGACACTCACAGGAGACACCTGTCATaGCAGTCCTGGGAGCACACC +
Preference number: 4 (lower is better)
Translates to: HQKEQGTVCPAGEGQDTHRRHLS*QSWEHT
Trigger: GGTGTGCTCCCAGGACTGGCATGACAGGTGTCTCCT...GTGAGTGTCTTGCCCTTCCCCAGCTGGGCATACAGTACCTTGCTCTTTCTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp AGAAAGGGGCACAAACTGTGTGCCTGCGGTAAATGTCTGCCCCCACACATAGACCCTTGCCCACTGGTCTaGACAGGGACTCATGGGCAC +
Preference number: 4 (lower is better)
Translates to: RKGHKLCACGKCLPPHIDPCPLV*TGTHGH
Trigger: GTGCCCATGAGTCCCTGTGCAGACCAGTGGGCAAGG...GTCTATGTGTGGGGGCAGACATTTACCGCAGGCACACAGTTTGTGCCCCTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp TTGAGCCCCTGGAGCCCTCAGGACCTACTGATAAAGCATGTCCTCTGCAGTATAGGGGGCGACAGGAGTTaGGGAGTGAGCAGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: LSPWSPQDLLIKHVLCSIGGDRS*GVSSQQ
Trigger: CTGCTGACTGCTCACTCCCCAACTCCTGTCGCCCCC...TATACTGCAGAGGACATGCTTTATCAGTAGGTCCTGAGGGCTCCAGGGGCTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp AGGACCACCCCCATTGCCTGTGAACACATTTGCATAGCACTCAAGAAGGTTTCCGTAAGTGGGCGTTCCTaGGGCCCGGTACGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: RTTPIACEHICIALKKVSVSGRS*GPVRGH
Trigger: GTGCCCACGTACCGGGCCCCAGGAACGCCCACTTAC...GGAAACCTTCTTGAGTGCTATGCAAATGTGTTCACAGGCAATGGGGGTGGTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp GGTCACTGGCTCACACTAAATGCTCAGCCGCCAGCACAGATCCAAACAAGACCTGCACATAGCTGTAAGTaGGCGTTCCTGGGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: GHWLTLNAQPPAQIQTRPAHSCK*AFLGPG
Trigger: ACCGGGCCCCAGGAACGCCCACTTACAGCTATGTGC...AGGTCTTGTTTGGATCTGTGCTGGCGGCTGAGCATTTAGTGTGAGCCAGTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp CTAAGTGTCGAGAGCATTAAGAAGAAAGTCCTGGTTGGAGGCGCAAGGCCTGCAGCAGACAACAGACACTaGCCTCCCCCTCGCCCCATC +
Preference number: 4 (lower is better)
Translates to: LSVESIKKKVLVGGARPAADNRH*PPPRPI
Trigger: GATGGGGCGAGGGGGAGGCCAGTGTCTGTTGTCTGC...TGCAGGCCTTGCGCCTCCAACCAGGACTTTCTTCTTAATGCTCTCGACACTTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp GTCCATGAACCAGCTGCACCCAAGCAGCTGTGGCTTCCCTACTCTCTCCCAAACCAGCTGCAAAAGAGATaGCAGGAGAGGCTCGCAGAC +
Preference number: 4 (lower is better)
Translates to: VHEPAAPKQLWLPYSLPNQLQKR*QERLAD
Trigger: GTCTGCGAGCCTCTCCTGCCATCTCTTTTGCAGCTG...GTTTGGGAGAGAGTAGGGAAGCCACAGCTGCTTGGGTGCAGCTGGTTCATGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp CAGCACTCACTGGCACTCACAGGTGCCTTACATACCTTACGGGGGCCAACACTGAAACCACCACTGCACTaGGAAGAAGACGCACGCTCC +
Preference number: 4 (lower is better)
Translates to: QHSLALTGALHTLRGPTLKPPLH*EEDARS
Trigger: GGAGCGTGCGTCTTCTTCCCAGTGCAGTGGTGGTTT...CAGTGTTGGCCCCCGTAAGGTATGTAAGGCACCTGTGAGTGCCAGTGAGTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp AGAAAGGGGCACAAACTGTGTGCCTGCGGTAAATGTCTGCCCCCACACATAGACCCCCCACCAACCAACTaGGGCAGAATGCTAGTGGGC +
Preference number: 4 (lower is better)
Translates to: RKGHKLCACGKCLPPHIDPPPTN*GRMLVG
Trigger: GCCCACTAGCATTCTGCCCCAGTTGGTTGGTGGGGG...GTCTATGTGTGGGGGCAGACATTTACCGCAGGCACACAGTTTGTGCCCCTTTCT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp AAATTCCTCTCCCACAATAAACCCTGCCAGCAAACGCACTCCAGCACTGCCTGGCCCCCACCAACCAACTaGGGCAGAATGCTAGTGGGC +
Preference number: 4 (lower is better)
Translates to: KFLSHNKPCQQTHSSTAWPPPTN*GRMLVG
Trigger: GCCCACTAGCATTCTGCCCCAGTTGGTTGGTGGGGG...CCAGGCAGTGCTGGAGTGCGTTTGCTGGCAGGGTTTATTGTGGGAGAGGAATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp AGAAAGGGGCACAAACTGTGTGCCTGCGGTAAATGTCTGCCCCCACACATAGACCTGCACAGGGACTCATaGGCACAGCCTGTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: RKGHKLCACGKCLPPHIDLHRDS*AQPVVR
Trigger: CCTCACCACAGGCTGTGCCCATGAGTCCCTGTGCAG...GTCTATGTGTGGGGGCAGACATTTACCGCAGGCACACAGTTTGTGCCCCTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp AAATTCCTCTCCCACAATAAACCCTGCCAGCAAACGCACTCCAGCACTGCCTGGAGGAGCACAAACGGCTaGCCTGAGATCTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: KFLSHNKPCQQTHSSTAWRSTNG*PEIWPS
Trigger: GCTGGGCCAGATCTCAGGCCAGCCGTTTGTGCTCCT...CCAGGCAGTGCTGGAGTGCGTTTGCTGGCAGGGTTTATTGTGGGAGAGGAATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR CAA 72 bp ACTCCAGCACTGCCTGGCCCTCTCTGCTGTCTGTGCTaGCTTTGTGCCAAGTGCCCTCAGCTGCAAAAGAGA +
Preference number: 4 (lower is better)
Translates to: TPALPGPLCCLC*LCAKCPQLQKR
Trigger: TCTCTTTTGCAGCTGAGGGCACTTGGCACAAAGCAAGCACAGACAGCAGAGAGGGCCAGGCAGTGCTGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR TCA 90 bp AGATGGAATTACCAACAGAGACTTGAAGAAAGGGGCACAAACTGTGTGCCTGCGGCTACGATAAGAGGCTaGCCCTCCGAGCCCCGCGTC +
Preference number: 4 (lower is better)
Translates to: RWNYQQRLEERGTNCVPAATIRG*PSEPRV
Trigger: GACGCGGGGCTCGGAGGGTCAGCCTCTTATCGTAGC...CGCAGGCACACAGTTTGTGCCCCTTTCTTCAAGTCTCTGTTGGTAATTCCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389915.4
CDS-3UTR TCA 90 bp CAGCACTCACTGGCACTCACAGGTGCCTTACATACCTTACGGGGGCCAACACTGTGCTACTTGGTCAGCTaGACCCCTGGAACCGTTAGA +
Preference number: 4 (lower is better)
Translates to: QHSLALTGALHTLRGPTLCYLVS*TPGTVR
Trigger: TCTAACGGTTCCAGGGGTTCAGCTGACCAAGTAGCA...CAGTGTTGGCCCCCGTAAGGTATGTAAGGCACCTGTGAGTGCCAGTGAGTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR TCA 90 bp CACCAGAAAGAGCAAGGTACTGTATGCCCAGCTGGGGAAGGGCAAGACACTCACTACGGGGGCCAACACTaGCAGGTATTAGTACGTCGC +
Preference number: 4 (lower is better)
Translates to: HQKEQGTVCPAGEGQDTHYGGQH*QVLVRR
Trigger: GCGACGTACTAATACCTGTCAGTGTTGGCCCCCGTA...GTGAGTGTCTTGCCCTTCCCCAGCTGGGCATACAGTACCTTGCTCTTTCTGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR TCA 90 bp CCTGCTGCTGCGCCCAATGGAGGTCCTGTCCTGTCCGGGCAACAGCCAAACTGGAAGAGACAAACTTTCTaGAACATGCAGTTTCCGACC +
Preference number: 4 (lower is better)
Translates to: PAAAPNGGPVLSGQQPNWKRQTF*NMQFPT
Trigger: GGTCGGAAACTGCATGTTTCAGAAAGTTTGTCTCTT...CCAGTTTGGCTGTTGCCCGGACAGGACAGGACCTCCATTGGGCGCAGCAGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR TCA 90 bp CCAGAGCCCACAGCACTCAAACCACCACTGCACTGGGAAGAAGACGCACGCTCCAGTTCAATGCAGAGGTaGGGGATGCCTTTAACACTG +
Preference number: 4 (lower is better)
Translates to: PEPTALKPPLHWEEDARSSSMQR*GMPLTL
Trigger: CAGTGTTAAAGGCATCCCTCACCTCTGCATTGAACT...GGAGCGTGCGTCTTCTTCCCAGTGCAGTGGTGGTTTGAGTGCTGTGGGCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp GTCCATGAACCAGCTGCACCCAAGCAGCTGTGGCTTCCCTACTCTCTCCCAAACCCAAGTGCCCTCAGCTaGAAAAGAGATGGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: VHEPAAPKQLWLPYSLPNPSALS*KRDGRR
Trigger: TCTCCTGCCATCTCTTTTGCAGCTGAGGGCACTTGG...GTTTGGGAGAGAGTAGGGAAGCCACAGCTGCTTGGGTGCAGCTGGTTCATGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp CAGCACTCACTGGCACTCACAGGTGCCTTACATACCTTACGGGGGCCAACACTGTCTGTGCTTGCTTTGTaGCAAGTGCCCTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: QHSLALTGALHTLRGPTLSVLAL*QVPSAA
Trigger: TGCAGCTGAGGGCACTTGGCACAAAGCAAGCACAGA...CAGTGTTGGCCCCCGTAAGGTATGTAAGGCACCTGTGAGTGCCAGTGAGTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp GAGCGGCAAGTTCATGGGTCACTGGCTCACACTAAATGCTCAGCCGCCAGCACATCCCACAATAAACCCTaGCAGCAAACGCACTCCAGC +
Preference number: 4 (lower is better)
Translates to: ERQVHGSLAHTKCSAASTSHNKP*QQTHSS
Trigger: GCTGGAGTGCGTTTGCTGGCAGGGTTTATTGTGGGA...TGTGCTGGCGGCTGAGCATTTAGTGTGAGCCAGTGACCCATGAACTTGCCGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp CTCAAACCACCACTGCACTGGGAAGAAGACGCACGCTCCTGCCCTAGAGGCCGCGCAAATTTCTCAGAATaGTCCACCATATGCTTCGGG +
Preference number: 4 (lower is better)
Translates to: LKPPLHWEEDARSCPRGRANFSE*STICFG
Trigger: CCCGAAGCATATGGTGGAGCATTCTGAGAAATTTGC...GCGGCCTCTAGGGCAGGAGCGTGCGTCTTCTTCCCAGTGCAGTGGTGGTTTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp TGCTGCGCCCAATGGAGGTCCTGTCCTGTCCGGGCAACAGCCAAACTGGCGACAAAAAGGTTCTGGAAGTaGCTTCAGGCCCATTACCAT +
Preference number: 4 (lower is better)
Translates to: CCAQWRSCPVRATAKLATKRFWK*LQAHYH
Trigger: ATGGTAATGGGCCTGAAGGCACTTCCAGAACCTTTT...TGTCGCCAGTTTGGCTGTTGCCCGGACAGGACAGGACCTCCATTGGGCGCAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp CAGCACTCACTGGCACTCACAGGTGCCTTACATACCTTACGGGGGCCAACACTGACTGGCACTCACAGGTaGCTTACATACCTTACGGGG +
Preference number: 4 (lower is better)
Translates to: QHSLALTGALHTLRGPTLTGTHR*LTYLTG
Trigger: CCCCGTAAGGTATGTAAGGCACCTGTGAGTGCCAGT...CAGTGTTGGCCCCCGTAAGGTATGTAAGGCACCTGTGAGTGCCAGTGAGTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp CTCAAACCACCACTGCACTGGGAAGAAGACGCACGCTCCTGCCCTAGAGGCCGCCATGGGAAAACCAGCTaGATAACCAATTCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: LKPPLHWEEDARSCPRGRHGKTS*ITNSFG
Trigger: GCCAAAGGAATTGGTTATCCAGCTGGTTTTCCCATG...GCGGCCTCTAGGGCAGGAGCGTGCGTCTTCTTCCCAGTGCAGTGGTGGTTTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp GGTCACTGGCTCACACTAAATGCTCAGCCGCCAGCACAGATCCAAACAAGACCTGAAGAAAGTCCTGGTTaGAGGCGCAAGGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GHWLTLNAQPPAQIQTRPEESPG*RRKACS
Trigger: GCTGCAGGCCTTGCGCCTCCAACCAGGACTTTCTTC...AGGTCTTGTTTGGATCTGTGCTGGCGGCTGAGCATTTAGTGTGAGCCAGTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp ACCCCAAGGCTCAGGACCACCCCCATTGCCTGTGAACACATTTGCATAGCACTCCAGCTGCAAAAGAGATaGCAGGAGAGGCTCGCAGAC +
Preference number: 4 (lower is better)
Translates to: TPRLRTTPIACEHICIALQLQKR*QERLAD
Trigger: GTCTGCGAGCCTCTCCTGCCATCTCTTTTGCAGCTG...GAGTGCTATGCAAATGTGTTCACAGGCAATGGGGGTGGTCCTGAGCCTTGGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp CAGCACTCACTGGCACTCACAGGTGCCTTACATACCTTACGGGGGCCAACACTGGGGCAACAGCCAAACTaGCGACAATGGACACATCCA +
Preference number: 4 (lower is better)
Translates to: QHSLALTGALHTLRGPTLGQQPN*RQWTHP
Trigger: TGGATGTGTCCATTGTCGCCAGTTTGGCTGTTGCCC...CAGTGTTGGCCCCCGTAAGGTATGTAAGGCACCTGTGAGTGCCAGTGAGTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR TCA 90 bp TGCTGCGCCCAATGGAGGTCCTGTCCTGTCCGGGCAACAGCCAAACTGGCGACATATAAACAGGATTCATaGTTTCAAAAACGCGCCGCG +
Preference number: 4 (lower is better)
Translates to: CCAQWRSCPVRATAKLATYKQDS*FQKRAA
Trigger: CGCGGCGCGTTTTTGAAATCATGAATCCTGTTTATA...TGTCGCCAGTTTGGCTGTTGCCCGGACAGGACAGGACCTCCATTGGGCGCAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389915.4
CDS-3UTR TCA 90 bp TTCAGTCCTGTGGACCAAGATAAGGCTATCCCCACAGGCTCTCTCTTCTTCAAACAGCAGGGTACCTGCTaGCATGGCCATGGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: FSPVDQDKAIPTGSLFFKQQGTC*HGHGGP
Trigger: GGGACCACCATGGCCATGTCAGCAGGTACCCTGCTG...TTTGAAGAAGAGAGAGCCTGTGGGGATAGCCTTATCTTGGTCCACAGGACTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR TCA 90 bp CTAAGTGTCGAGAGCATTAAGAAGAAAGTCCTGGTTGGAGGCGCAAGGCCTGCACCACCATCAGGTGGGTaGTCCCAGAAGCAGCTACAG +
Preference number: 4 (lower is better)
Translates to: LSVESIKKKVLVGGARPAPPSGG*SQKQLQ
Trigger: CTGTAGCTGCTTCTGGGATCACCCACCTGATGGTGG...TGCAGGCCTTGCGCCTCCAACCAGGACTTTCTTCTTAATGCTCTCGACACTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR TCA 90 bp TGGCCCAGCTGCCTTGCCCACTGGTCTGCACAGGGACTCATGGGCACAGCCTGTATGTCCATGTTTACATaGACTAGGTCCTTTGCTTAC +
Preference number: 4 (lower is better)
Translates to: WPSCLAHWSAQGLMGTACMSMFT*TRSFAY
Trigger: GTAAGCAAAGGACCTAGTTCATGTAAACATGGACAT...ACAGGCTGTGCCCATGAGTCCCTGTGCAGACCAGTGGGCAAGGCAGCTGGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp ACTCTGGCCCTCACAGAGCGGCAAGTTCATGGGTCACTGGCTCACACTAAATGCATAGGCAGGAGCTGCTaGTGCATAGCCCATGGGAAA +
Preference number: 4 (lower is better)
Translates to: TLALTERQVHGSLAHTKCIGRSC*CIAHGK
Trigger: TTTCCCATGGGCTATGCAGCAGCAGCTCCTGCCTAT...GCATTTAGTGTGAGCCAGTGACCCATGAACTTGCCGCTCTGTGAGGGCCAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp AGAAAGGGGCACAAACTGTGTGCCTGCGGTAAATGTCTGCCCCCACACATAGACAGAATAGGCAGGAGCTaGTGCTGCATAGCCCATGGG +
Preference number: 4 (lower is better)
Translates to: RKGHKLCACGKCLPPHIDRIGRS*CCIAHG
Trigger: CCCATGGGCTATGCAGCAGCAGCTCCTGCCTATTCT...GTCTATGTGTGGGGGCAGACATTTACCGCAGGCACACAGTTTGTGCCCCTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp CTAGACCTCATTCATCACAGCCAGATGATGCCACCAGAAAGAGCAAGGTACTGTACACCGTTGCAGGCATaGCGTTGGGCTGCACCACCG +
Preference number: 4 (lower is better)
Translates to: LDLIHHSQMMPPERARYCTPLQA*RWAAPP
Trigger: CGGTGGTGCAGCCCAACGGCATGCCTGCAACGGTGT...ACAGTACCTTGCTCTTTCTGGTGGCATCATCTGGCTGTGATGAATGAGGTCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp ACTCTGGCCCTCACAGAGCGGCAAGTTCATGGGTCACTGGCTCACACTAAATGCTCCCAGGACAGTCAGTaGCAAAGAAACAGGTCGCTG +
Preference number: 4 (lower is better)
Translates to: TLALTERQVHGSLAHTKCSQDSQ*QRNRSL
Trigger: CAGCGACCTGTTTCTTTGGCACTGACTGTCCTGGGA...GCATTTAGTGTGAGCCAGTGACCCATGAACTTGCCGCTCTGTGAGGGCCAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp CACCAGAAAGAGCAAGGTACTGTATGCCCAGCTGGGGAAGGGCAAGACACTCACTCCCAGGACAGTCAGTaGCAAAGAAACAGGTCGCTG +
Preference number: 4 (lower is better)
Translates to: HQKEQGTVCPAGEGQDTHSQDSQ*QRNRSL
Trigger: CAGCGACCTGTTTCTTTGGCACTGACTGTCCTGGGA...GTGAGTGTCTTGCCCTTCCCCAGCTGGGCATACAGTACCTTGCTCTTTCTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp ACTCTGGCCCTCACAGAGCGGCAAGTTCATGGGTCACTGGCTCACACTAAATGCCCTCTCTGCTGTCTGTaGTTGCTTTGTGCCAAGTGC +
Preference number: 4 (lower is better)
Translates to: TLALTERQVHGSLAHTKCPLCCL*LLCAKC
Trigger: GCACTTGGCACAAAGCAAGCACAGACAGCAGAGAGG...GCATTTAGTGTGAGCCAGTGACCCATGAACTTGCCGCTCTGTGAGGGCCAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp CCAGAGCCCACAGCACTCAAACCACCACTGCACTGGGAAGAAGACGCACGCTCCAAAAGGTTCTGGAAGTaGCTTCAGGCCCATTACCAT +
Preference number: 4 (lower is better)
Translates to: PEPTALKPPLHWEEDARSKRFWK*LQAHYH
Trigger: ATGGTAATGGGCCTGAAGGCACTTCCAGAACCTTTT...GGAGCGTGCGTCTTCTTCCCAGTGCAGTGGTGGTTTGAGTGCTGTGGGCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp AGAAAGGGGCACAAACTGTGTGCCTGCGGTAAATGTCTGCCCCCACACATAGACGAGAAATACGTGCTCTaGCTTCCCCCAGGCCAACCA +
Preference number: 4 (lower is better)
Translates to: RKGHKLCACGKCLPPHIDEKYVL*LPPGQP
Trigger: TGGTTGGCCTGGGGGAAGGCAGAGCACGTATTTCTC...GTCTATGTGTGGGGGCAGACATTTACCGCAGGCACACAGTTTGTGCCCCTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp CAGCACTCACTGGCACTCACAGGTGCCTTACATACCTTACGGGGGCCAACACTGTACTCAAGAGTCTGCTaGCCTTCAGAAAGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: QHSLALTGALHTLRGPTLYSRVC*PSESQR
Trigger: CCTCTGGCTTTCTGAAGGGCAGCAGACTCTTGAGTA...CAGTGTTGGCCCCCGTAAGGTATGTAAGGCACCTGTGAGTGCCAGTGAGTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp TGGCCCAGCTGCCTTGCCCACTGGTCTGCACAGGGACTCATGGGCACAGCCTGTATAAAGCATGTCCTCTaGAGTATACTCAAGAGTCTG +
Preference number: 4 (lower is better)
Translates to: WPSCLAHWSAQGLMGTACIKHVL*SILKSL
Trigger: CAGACTCTTGAGTATACTGCAGAGGACATGCTTTAT...ACAGGCTGTGCCCATGAGTCCCTGTGCAGACCAGTGGGCAAGGCAGCTGGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp TTCAGTCCTGTGGACCAAGATAAGGCTATCCCCACAGGCTCTCTCTTCTTCAAAGGGGGCGACAGGAGTTaGGGAGTGAGCAGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: FSPVDQDKAIPTGSLFFKGGDRS*GVSSQQ
Trigger: CTGCTGACTGCTCACTCCCCAACTCCTGTCGCCCCC...TTTGAAGAAGAGAGAGCCTGTGGGGATAGCCTTATCTTGGTCCACAGGACTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR TCA 90 bp AGAAAGGGGCACAAACTGTGTGCCTGCGGTAAATGTCTGCCCCCACACATAGACTCAAACATTTGCAGGTaGTCACCACTGAGGGGGCAC +
Preference number: 4 (lower is better)
Translates to: RKGHKLCACGKCLPPHIDSNICR*SPLRGH
Trigger: GTGCCCCCTCAGTGGTGATCACCTGCAAATGTTTGA...GTCTATGTGTGGGGGCAGACATTTACCGCAGGCACACAGTTTGTGCCCCTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR TCA 90 bp TGGTCAGCTGAACCCCTGGAACCGTTAGAACCTACTAATCCTGCCAACCATCCACACTCTGACCCTCACTaGGAACCGACATGCACTCTC +
Preference number: 4 (lower is better)
Translates to: WSAEPLEPLEPTNPANHPHSDPH*EPTCTL
Trigger: GAGAGTGCATGTCGGTTCTCAGTGAGGGTCAGAGTG...TGGATGGTTGGCAGGATTAGTAGGTTCTAACGGTTCCAGGGGTTCAGCTGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR TCA 90 bp CTCAAACCACCACTGCACTGGGAAGAAGACGCACGCTCCTGCCCTAGAGGCCGCGTCCAGATTCTTACCTaGTATCTACCTTTCGTATCT +
Preference number: 4 (lower is better)
Translates to: LKPPLHWEEDARSCPRGRVQILT*YLPFVS
Trigger: AGATACGAAAGGTAGATATCAGGTAAGAATCTGGAC...GCGGCCTCTAGGGCAGGAGCGTGCGTCTTCTTCCCAGTGCAGTGGTGGTTTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR TCA 90 bp AAATTCCTCTCCCACAATAAACCCTGCCAGCAAACGCACTCCAGCACTGCCTGGTCTCCCCTTCCCAAGTaGCTTCACTTCAGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: KFLSHNKPCQQTHSSTAWSPLPK*LHFSPV
Trigger: CACAGGACTGAAGTGAAGTCACTTGGGAAGGGGAGA...CCAGGCAGTGCTGGAGTGCGTTTGCTGGCAGGGTTTATTGTGGGAGAGGAATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp CTAGACCTCATTCATCACAGCCAGATGATGCCACCAGAAAGAGCAAGGTACTGTGTACGTGCCTTGCTGTaGATACGGGCTCTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: LDLIHHSQMMPPERARYCVRALL*IRALLG
Trigger: CCCCAGCAGAGCCCGTATGCACAGCAAGGCACGTAC...ACAGTACCTTGCTCTTTCTGGTGGCATCATCTGGCTGTGATGAATGAGGTCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp CTAAGTGTCGAGAGCATTAAGAAGAAAGTCCTGGTTGGAGGCGCAAGGCCTGCAGCTGTGTGTAGTACGTaGCTTGCTGTGCATACGGGC +
Preference number: 4 (lower is better)
Translates to: LSVESIKKKVLVGGARPAAVCST*LAVHTG
Trigger: GCCCGTATGCACAGCAAGGCACGTACTACACACAGC...TGCAGGCCTTGCGCCTCCAACCAGGACTTTCTTCTTAATGCTCTCGACACTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp CGGCCTCAGCAGACAAGTCACCACCATCAGGTGGGTGATCCCAGAAGCAGCTACACATATCCACGGCCCTaGCTTTCTACAAGAAATTGG +
Preference number: 4 (lower is better)
Translates to: RPQQTSHHHQVGDPRSSYTYPRP*LSTRNW
Trigger: CCAATTTCTTGTAGAAAGGCAGGGCCGTGGATATGT...GTAGCTGCTTCTGGGATCACCCACCTGATGGTGGTGACTTGTCTGCTGAGGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp AGAAAGGGGCACAAACTGTGTGCCTGCGGTAAATGTCTGCCCCCACACATAGACCCAAGTGCCCTCAGCTaGAAAAGAGATGGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: RKGHKLCACGKCLPPHIDPSALS*KRDGRR
Trigger: TCTCCTGCCATCTCTTTTGCAGCTGAGGGCACTTGG...GTCTATGTGTGGGGGCAGACATTTACCGCAGGCACACAGTTTGTGCCCCTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp TTGAGCCCCTGGAGCCCTCAGGACCTACTGATAAAGCATGTCCTCTGCAGTATACTGCCTGGCCCTCTCTaGTGTCTGTGCTTGCTTTGT +
Preference number: 4 (lower is better)
Translates to: LSPWSPQDLLIKHVLCSILPGPL*CLCLLC
Trigger: ACAAAGCAAGCACAGACAGCAGAGAGGGCCAGGCAG...TATACTGCAGAGGACATGCTTTATCAGTAGGTCCTGAGGGCTCCAGGGGCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp AGATGGAATTACCAACAGAGACTTGAAGAAAGGGGCACAAACTGTGTGCCTGCGCACTCACTGACCAGGTaGCCACCCCAAGGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: RWNYQQRLEERGTNCVPAHSLTR*PPQGSG
Trigger: TCCTGAGCCTTGGGGTGGGCACCTGGTCAGTGAGTG...CGCAGGCACACAGTTTGTGCCCCTTTCTTCAAGTCTCTGTTGGTAATTCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp ACCCCAAGGCTCAGGACCACCCCCATTGCCTGTGAACACATTTGCATAGCACTCGGGAACACTCACAAATaGAGAGGTACTAGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: TPRLRTTPIACEHICIALGNTHK*RGTRGE
Trigger: CTCCCCTCTAGTACCTCTGCATTTGTGAGTGTTCCC...GAGTGCTATGCAAATGTGTTCACAGGCAATGGGGGTGGTCCTGAGCCTTGGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp TGCTGCGCCCAATGGAGGTCCTGTCCTGTCCGGGCAACAGCCAAACTGGCGACAATAAAGCATGTCCTCTaGAGTATACTCAAGAGTCTG +
Preference number: 4 (lower is better)
Translates to: CCAQWRSCPVRATAKLATIKHVL*SILKSL
Trigger: CAGACTCTTGAGTATACTGCAGAGGACATGCTTTAT...TGTCGCCAGTTTGGCTGTTGCCCGGACAGGACAGGACCTCCATTGGGCGCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp CTAGACCTCATTCATCACAGCCAGATGATGCCACCAGAAAGAGCAAGGTACTGTGCACAGCCCCGCTGGTaGGGGAACAGGACACTTTGT +
Preference number: 4 (lower is better)
Translates to: LDLIHHSQMMPPERARYCAQPRW*GNRTLC
Trigger: ACAAAGTGTCCTGTTCCCCCACCAGCGGGGCTGTGC...ACAGTACCTTGCTCTTTCTGGTGGCATCATCTGGCTGTGATGAATGAGGTCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp AGAAAGGGGCACAAACTGTGTGCCTGCGGTAAATGTCTGCCCCCACACATAGACTTCACCAGCACTCACTaGCACTCACAGGTGCCTTAC +
Preference number: 4 (lower is better)
Translates to: RKGHKLCACGKCLPPHIDFTSTH*HSQVPY
Trigger: GTAAGGCACCTGTGAGTGCCAGTGAGTGCTGGTGAA...GTCTATGTGTGGGGGCAGACATTTACCGCAGGCACACAGTTTGTGCCCCTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp GAGCGGCAAGTTCATGGGTCACTGGCTCACACTAAATGCTCAGCCGCCAGCACAAACTTCTGTGTTACTTaGTCAGTTGAGCCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: ERQVHGSLAHTKCSAASTNFCVT*SVEPLE
Trigger: CTCCAGGGGCTCAACTGACCAAGTAACACAGAAGTT...TGTGCTGGCGGCTGAGCATTTAGTGTGAGCCAGTGACCCATGAACTTGCCGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR TCA 90 bp CTAAGTGTCGAGAGCATTAAGAAGAAAGTCCTGGTTGGAGGCGCAAGGCCTGCAGAATCCCCAATAATGTaGCTGCACAGCTCCGTCCTC +
Preference number: 4 (lower is better)
Translates to: LSVESIKKKVLVGGARPAESPIM*LHSSVL
Trigger: GAGGACGGAGCTGTGCAGTCACATTATTGGGGATTC...TGCAGGCCTTGCGCCTCCAACCAGGACTTTCTTCTTAATGCTCTCGACACTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR TCA 90 bp GAGCGGCAAGTTCATGGGTCACTGGCTCACACTAAATGCTCAGCCGCCAGCACATTACCAACAGAGACTTaGAGAAAGGGGCACAAACTG +
Preference number: 4 (lower is better)
Translates to: ERQVHGSLAHTKCSAASTLPTET*RKGHKL
Trigger: CAGTTTGTGCCCCTTTCTTCAAGTCTCTGTTGGTAA...TGTGCTGGCGGCTGAGCATTTAGTGTGAGCCAGTGACCCATGAACTTGCCGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR TCA 90 bp TTGAGCCCCTGGAGCCCTCAGGACCTACTGATAAAGCATGTCCTCTGCAGTATATGCTACTTGGTCAGCTaGACCCCTGGAACCGTTAGA +
Preference number: 4 (lower is better)
Translates to: LSPWSPQDLLIKHVLCSICYLVS*TPGTVR
Trigger: TCTAACGGTTCCAGGGGTTCAGCTGACCAAGTAGCA...TATACTGCAGAGGACATGCTTTATCAGTAGGTCCTGAGGGCTCCAGGGGCTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp CTAAGTGTCGAGAGCATTAAGAAGAAAGTCCTGGTTGGAGGCGCAAGGCCTGCACCTCTCTGCTGTCTGTaGTTGCTTTGTGCCAAGTGC +
Preference number: 4 (lower is better)
Translates to: LSVESIKKKVLVGGARPAPLCCL*LLCAKC
Trigger: GCACTTGGCACAAAGCAAGCACAGACAGCAGAGAGG...TGCAGGCCTTGCGCCTCCAACCAGGACTTTCTTCTTAATGCTCTCGACACTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp CTAAGTGTCGAGAGCATTAAGAAGAAAGTCCTGGTTGGAGGCGCAAGGCCTGCATCCCACAATAAACCCTaGCAGCAAACGCACTCCAGC +
Preference number: 4 (lower is better)
Translates to: LSVESIKKKVLVGGARPASHNKP*QQTHSS
Trigger: GCTGGAGTGCGTTTGCTGGCAGGGTTTATTGTGGGA...TGCAGGCCTTGCGCCTCCAACCAGGACTTTCTTCTTAATGCTCTCGACACTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp AAATTCCTCTCCCACAATAAACCCTGCCAGCAAACGCACTCCAGCACTGCCTGGACACCATCCTGTGTGTaGCAAGTACCAAGCAAGCCT +
Preference number: 4 (lower is better)
Translates to: KFLSHNKPCQQTHSSTAWTPSCV*QVPSKP
Trigger: AGGCTTGCTTGGTACTTGGCACACACAGGATGGTGT...CCAGGCAGTGCTGGAGTGCGTTTGCTGGCAGGGTTTATTGTGGGAGAGGAATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp CAGCACTCACTGGCACTCACAGGTGCCTTACATACCTTACGGGGGCCAACACTGGCAAATTTCTCAGAATaGTCCACCATATGCTTCGGG +
Preference number: 4 (lower is better)
Translates to: QHSLALTGALHTLRGPTLANFSE*STICFG
Trigger: CCCGAAGCATATGGTGGAGCATTCTGAGAAATTTGC...CAGTGTTGGCCCCCGTAAGGTATGTAAGGCACCTGTGAGTGCCAGTGAGTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp AGAAAGGGGCACAAACTGTGTGCCTGCGGTAAATGTCTGCCCCCACACATAGACAGGCCAACCACACTCTaGTTTAGAGACCCTCTCAGA +
Preference number: 4 (lower is better)
Translates to: RKGHKLCACGKCLPPHIDRPTTL*FRDPLR
Trigger: TCTGAGAGGGTCTCTAAAGCAGAGTGTGGTTGGCCT...GTCTATGTGTGGGGGCAGACATTTACCGCAGGCACACAGTTTGTGCCCCTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp AGGACCACCCCCATTGCCTGTGAACACATTTGCATAGCACTCAAGAAGGTTTCCGAGAAATACGTGCTCTaGCTTCCCCCAGGCCAACCA +
Preference number: 4 (lower is better)
Translates to: RTTPIACEHICIALKKVSEKYVL*LPPGQP
Trigger: TGGTTGGCCTGGGGGAAGGCAGAGCACGTATTTCTC...GGAAACCTTCTTGAGTGCTATGCAAATGTGTTCACAGGCAATGGGGGTGGTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp CACCAGAAAGAGCAAGGTACTGTATGCCCAGCTGGGGAAGGGCAAGACACTCACGTATACTCAAGAGTCTaGTGCCCTTCAGAAAGCCAG +
Preference number: 4 (lower is better)
Translates to: HQKEQGTVCPAGEGQDTHVYSRV*CPSESQ
Trigger: CTGGCTTTCTGAAGGGCAGCAGACTCTTGAGTATAC...GTGAGTGTCTTGCCCTTCCCCAGCTGGGCATACAGTACCTTGCTCTTTCTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp ACTGATAAAGCATGTCCTCTGCAGTATACTCAAGAGTCTGCTGCCCTTCAGAAAGCAGACAACAGACACTaGCCTCCCCCTCGCCCCATC +
Preference number: 4 (lower is better)
Translates to: TDKACPLQYTQESAALQKADNRH*PPPRPI
Trigger: GATGGGGCGAGGGGGAGGCCAGTGTCTGTTGTCTGC...TTTCTGAAGGGCAGCAGACTCTTGAGTATACTGCAGAGGACATGCTTTATCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp AGGACCACCCCCATTGCCTGTGAACACATTTGCATAGCACTCAAGAAGGTTTCCGATGTAAATGGCGTGTaGGGGGTGCAGCCCACTCTT +
Preference number: 4 (lower is better)
Translates to: RTTPIACEHICIALKKVSDVNGV*GVQPTL
Trigger: AAGAGTGGGCTGCACCCCCCACACGCCATTTACATC...GGAAACCTTCTTGAGTGCTATGCAAATGTGTTCACAGGCAATGGGGGTGGTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp GAGCGGCAAGTTCATGGGTCACTGGCTCACACTAAATGCTCAGCCGCCAGCACAAAGTTCATGGGTCACTaGCTCACACTAAATGCTCAG +
Preference number: 4 (lower is better)
Translates to: ERQVHGSLAHTKCSAASTKFMGH*LTLNAQ
Trigger: CTGAGCATTTAGTGTGAGCCAGTGACCCATGAACTT...TGTGCTGGCGGCTGAGCATTTAGTGTGAGCCAGTGACCCATGAACTTGCCGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp CAGCACTCACTGGCACTCACAGGTGCCTTACATACCTTACGGGGGCCAACACTGAAGTTCATGGGTCACTaGCTCACACTAAATGCTCAG +
Preference number: 4 (lower is better)
Translates to: QHSLALTGALHTLRGPTLKFMGH*LTLNAQ
Trigger: CTGAGCATTTAGTGTGAGCCAGTGACCCATGAACTT...CAGTGTTGGCCCCCGTAAGGTATGTAAGGCACCTGTGAGTGCCAGTGAGTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp TGGTCAGCTGAACCCCTGGAACCGTTAGAACCTACTAATCCTGCCAACCATCCATACTGTATGCCCAGCTaGGGAAGGGCAAGACACTCA +
Preference number: 4 (lower is better)
Translates to: WSAEPLEPLEPTNPANHPYCMPS*GRARHS
Trigger: TGAGTGTCTTGCCCTTCCCCAGCTGGGCATACAGTA...TGGATGGTTGGCAGGATTAGTAGGTTCTAACGGTTCCAGGGGTTCAGCTGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp TTGAGCCCCTGGAGCCCTCAGGACCTACTGATAAAGCATGTCCTCTGCAGTATATTCACCAGCACTCACTaGCACTCACAGGTGCCTTAC +
Preference number: 4 (lower is better)
Translates to: LSPWSPQDLLIKHVLCSIFTSTH*HSQVPY
Trigger: GTAAGGCACCTGTGAGTGCCAGTGAGTGCTGGTGAA...TATACTGCAGAGGACATGCTTTATCAGTAGGTCCTGAGGGCTCCAGGGGCTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR TCA 90 bp GTCCATGAACCAGCTGCACCCAAGCAGCTGTGGCTTCCCTACTCTCTCCCAAACTCACTGCAGGTAGATTaGGCAAGCTTTTTGTGTTTG +
Preference number: 4 (lower is better)
Translates to: VHEPAAPKQLWLPYSLPNSLQVD*ASFLCL
Trigger: CAAACACAAAAAGCTTGCTCAATCTACCTGCAGTGA...GTTTGGGAGAGAGTAGGGAAGCCACAGCTGCTTGGGTGCAGCTGGTTCATGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR TCA 90 bp AGGACCACCCCCATTGCCTGTGAACACATTTGCATAGCACTCAAGAAGGTTTCCTCAAAGGGATGTCCATaGACCAGCTGCACCCAAGCA +
Preference number: 4 (lower is better)
Translates to: RTTPIACEHICIALKKVSSKGCP*TSCTQA
Trigger: TGCTTGGGTGCAGCTGGTTCATGGACATCCCTTTGA...GGAAACCTTCTTGAGTGCTATGCAAATGTGTTCACAGGCAATGGGGGTGGTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR TCA 90 bp TTCAGTCCTGTGGACCAAGATAAGGCTATCCCCACAGGCTCTCTCTTCTTCAAACACTCTGACCCTCACTaGGAACCGACATGCACTCTC +
Preference number: 4 (lower is better)
Translates to: FSPVDQDKAIPTGSLFFKHSDPH*EPTCTL
Trigger: GAGAGTGCATGTCGGTTCTCAGTGAGGGTCAGAGTG...TTTGAAGAAGAGAGAGCCTGTGGGGATAGCCTTATCTTGGTCCACAGGACTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR TCA 90 bp CTAGACCTCATTCATCACAGCCAGATGATGCCACCAGAAAGAGCAAGGTACTGTAGCTGTCGGATAAGGTaGAGGTGGCCCAACTGCTCA +
Preference number: 4 (lower is better)
Translates to: LDLIHHSQMMPPERARYCSCRIR*RWPNCS
Trigger: TGAGCAGTTGGGCCACCTTCACCTTATCCGACAGCT...ACAGTACCTTGCTCTTTCTGGTGGCATCATCTGGCTGTGATGAATGAGGTCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR TCA 90 bp CAGCACTCACTGGCACTCACAGGTGCCTTACATACCTTACGGGGGCCAACACTGAAGAGACAAACTTTCTaGAACATGCAGTTTCCGACC +
Preference number: 4 (lower is better)
Translates to: QHSLALTGALHTLRGPTLKRQTF*NMQFPT
Trigger: GGTCGGAAACTGCATGTTTCAGAAAGTTTGTCTCTT...CAGTGTTGGCCCCCGTAAGGTATGTAAGGCACCTGTGAGTGCCAGTGAGTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR TCA 90 bp AAATTCCTCTCCCACAATAAACCCTGCCAGCAAACGCACTCCAGCACTGCCTGGTTTAGTTACAATCCATaGGGCTCTCTAGGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: KFLSHNKPCQQTHSSTAWFSYNP*GSLGPL
Trigger: GAGAGGCCCTAGAGAGCCTCATGGATTGTAACTAAA...CCAGGCAGTGCTGGAGTGCGTTTGCTGGCAGGGTTTATTGTGGGAGAGGAATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR TCA 90 bp AGAAAGGGGCACAAACTGTGTGCCTGCGGTAAATGTCTGCCCCCACACATAGACAGTTCAATGCAGAGGTaGGGGATGCCTTTAACACTG +
Preference number: 4 (lower is better)
Translates to: RKGHKLCACGKCLPPHIDSSMQR*GMPLTL
Trigger: CAGTGTTAAAGGCATCCCTCACCTCTGCATTGAACT...GTCTATGTGTGGGGGCAGACATTTACCGCAGGCACACAGTTTGTGCCCCTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR TCA 90 bp ACCCCAAGGCTCAGGACCACCCCCATTGCCTGTGAACACATTTGCATAGCACTCCAATTGACACCTAACTaGACTGGCTCAGGATGGAAA +
Preference number: 4 (lower is better)
Translates to: TPRLRTTPIACEHICIALQLTPN*TGSGWK
Trigger: TTTCCATCCTGAGCCAGTTCAGTTAGGTGTCAATTG...GAGTGCTATGCAAATGTGTTCACAGGCAATGGGGGTGGTCCTGAGCCTTGGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp GAGCGGCAAGTTCATGGGTCACTGGCTCACACTAAATGCTCAGCCGCCAGCACAACACTTTGTAAGGTGTaGCAGGAGTGTAACCTGTTT +
Preference number: 4 (lower is better)
Translates to: ERQVHGSLAHTKCSAASTTLCKV*QECNLF
Trigger: AAACAGGTTACACTCCTGGCACACCTTACAAAGTGT...TGTGCTGGCGGCTGAGCATTTAGTGTGAGCCAGTGACCCATGAACTTGCCGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp GGTCACTGGCTCACACTAAATGCTCAGCCGCCAGCACAGATCCAAACAAGACCTTTGCTTTGTGCCAAGTaGCCTCAGCTGCAAAAGAGA +
Preference number: 4 (lower is better)
Translates to: GHWLTLNAQPPAQIQTRPLLCAK*PQLQKR
Trigger: TCTCTTTTGCAGCTGAGGGCACTTGGCACAAAGCAA...AGGTCTTGTTTGGATCTGTGCTGGCGGCTGAGCATTTAGTGTGAGCCAGTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp GAGCGGCAAGTTCATGGGTCACTGGCTCACACTAAATGCTCAGCCGCCAGCACAGCCTGTGAACACATTTaGATAGCACTCAAGAAGGTT +
Preference number: 4 (lower is better)
Translates to: ERQVHGSLAHTKCSAASTACEHI*IALKKV
Trigger: AACCTTCTTGAGTGCTATGCAAATGTGTTCACAGGC...TGTGCTGGCGGCTGAGCATTTAGTGTGAGCCAGTGACCCATGAACTTGCCGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp CAGCACTCACTGGCACTCACAGGTGCCTTACATACCTTACGGGGGCCAACACTGGCCTGTGAACACATTTaGATAGCACTCAAGAAGGTT +
Preference number: 4 (lower is better)
Translates to: QHSLALTGALHTLRGPTLACEHI*IALKKV
Trigger: AACCTTCTTGAGTGCTATGCAAATGTGTTCACAGGC...CAGTGTTGGCCCCCGTAAGGTATGTAAGGCACCTGTGAGTGCCAGTGAGTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp ACTGATAAAGCATGTCCTCTGCAGTATACTCAAGAGTCTGCTGCCCTTCAGAAAGAGGGGAGAAATACGTaGTCTGCCTTCCCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: TDKACPLQYTQESAALQKEGRNT*SAFPQA
Trigger: GGCCTGGGGGAAGGCAGAGCACGTATTTCTCCCCTC...TTTCTGAAGGGCAGCAGACTCTTGAGTATACTGCAGAGGACATGCTTTATCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp ACTGATAAAGCATGTCCTCTGCAGTATACTCAAGAGTCTGCTGCCCTTCAGAAAGCACATAGCTGTAAGTaGGCGTTCCTGGGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: TDKACPLQYTQESAALQKAHSCK*AFLGPG
Trigger: ACCGGGCCCCAGGAACGCCCACTTACAGCTATGTGC...TTTCTGAAGGGCAGCAGACTCTTGAGTATACTGCAGAGGACATGCTTTATCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp TGGTCAGCTGAACCCCTGGAACCGTTAGAACCTACTAATCCTGCCAACCATCCATTAAGAAGAAAGTCCTaGTTGGAGGCGCAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: WSAEPLEPLEPTNPANHPLRRKS*LEAQGL
Trigger: CAGGCCTTGCGCCTCCAACCAGGACTTTCTTCTTAA...TGGATGGTTGGCAGGATTAGTAGGTTCTAACGGTTCCAGGGGTTCAGCTGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp ACCCCAAGGCTCAGGACCACCCCCATTGCCTGTGAACACATTTGCATAGCACTCCGCCCCAAATTTCACTaGCCACACTACCATAATCTT +
Preference number: 4 (lower is better)
Translates to: TPRLRTTPIACEHICIALRPKFH*PHYHNL
Trigger: AAGATTATGGTAGTGTGGCCAGTGAAATTTGGGGCG...GAGTGCTATGCAAATGTGTTCACAGGCAATGGGGGTGGTCCTGAGCCTTGGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp CAGCACTCACTGGCACTCACAGGTGCCTTACATACCTTACGGGGGCCAACACTGTACCTCCTGCAAGCATaGCTGTTTCTCTTTCACATT +
Preference number: 4 (lower is better)
Translates to: QHSLALTGALHTLRGPTLYLLQA*LFLFHI
Trigger: AATGTGAAAGAGAAACAGCCATGCTTGCAGGAGGTA...CAGTGTTGGCCCCCGTAAGGTATGTAAGGCACCTGTGAGTGCCAGTGAGTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp GAGCGGCAAGTTCATGGGTCACTGGCTCACACTAAATGCTCAGCCGCCAGCACAATAACTAGTACATGTTaGCCTTTCACCAGCACTCAC +
Preference number: 4 (lower is better)
Translates to: ERQVHGSLAHTKCSAASTITSTC*PFTSTH
Trigger: GTGAGTGCTGGTGAAAGGCCAACATGTACTAGTTAT...TGTGCTGGCGGCTGAGCATTTAGTGTGAGCCAGTGACCCATGAACTTGCCGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp ACTCTGGCCCTCACAGAGCGGCAAGTTCATGGGTCACTGGCTCACACTAAATGCTTCACTTCAGTCCTGTaGACCAAGATAAGGCTATCC +
Preference number: 4 (lower is better)
Translates to: TLALTERQVHGSLAHTKCFTSVL*TKIRLS
Trigger: GGATAGCCTTATCTTGGTCCACAGGACTGAAGTGAA...GCATTTAGTGTGAGCCAGTGACCCATGAACTTGCCGCTCTGTGAGGGCCAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR TCA 90 bp TTCAGTCCTGTGGACCAAGATAAGGCTATCCCCACAGGCTCTCTCTTCTTCAAATCAAACATTTGCAGGTaGTCACCACTGAGGGGGCAC +
Preference number: 4 (lower is better)
Translates to: FSPVDQDKAIPTGSLFFKSNICR*SPLRGH
Trigger: GTGCCCCCTCAGTGGTGATCACCTGCAAATGTTTGA...TTTGAAGAAGAGAGAGCCTGTGGGGATAGCCTTATCTTGGTCCACAGGACTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR TCA 90 bp CGGCCTCAGCAGACAAGTCACCACCATCAGGTGGGTGATCCCAGAAGCAGCTACAAAGAAACAGGTCGCTaGAAACTAAAATGTCCACAT +
Preference number: 4 (lower is better)
Translates to: RPQQTSHHHQVGDPRSSYKETGR*KLKCPH
Trigger: ATGTGGACATTTTAGTTTTCAGCGACCTGTTTCTTT...GTAGCTGCTTCTGGGATCACCCACCTGATGGTGGTGACTTGTCTGCTGAGGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR TCA 90 bp ACTGGCAACCCACATCAACCCCAAAAGGTTGAAGAATCATCTAAGATATTTCAGTGCCCTAGAGGCCGCTaGAAGGGACCCAGGCCTTAC +
Preference number: 4 (lower is better)
Translates to: TGNPHQPQKVEESSKIFQCPRGR*KGPRPY
Trigger: GTAAGGCCTGGGTCCCTTTCAGCGGCCTCTAGGGCA...CTGAAATATCTTAGATGATTCTTCAACCTTTTGGGGTTGATGTGGGTTGCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR TCA 90 bp AAATTCCTCTCCCACAATAAACCCTGCCAGCAAACGCACTCCAGCACTGCCTGGTTACCAACAGAGACTTaGAGAAAGGGGCACAAACTG +
Preference number: 4 (lower is better)
Translates to: KFLSHNKPCQQTHSSTAWLPTET*RKGHKL
Trigger: CAGTTTGTGCCCCTTTCTTCAAGTCTCTGTTGGTAA...CCAGGCAGTGCTGGAGTGCGTTTGCTGGCAGGGTTTATTGTGGGAGAGGAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR TCA 90 bp CTAAGTGTCGAGAGCATTAAGAAGAAAGTCCTGGTTGGAGGCGCAAGGCCTGCATTTAGTTACAATCCATaGGGCTCTCTAGGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: LSVESIKKKVLVGGARPAFSYNP*GSLGPL
Trigger: GAGAGGCCCTAGAGAGCCTCATGGATTGTAACTAAA...TGCAGGCCTTGCGCCTCCAACCAGGACTTTCTTCTTAATGCTCTCGACACTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR TCA 90 bp CGGCCTCAGCAGACAAGTCACCACCATCAGGTGGGTGATCCCAGAAGCAGCTACTATAAACAGGATTCATaGTTTCAAAAACCTCCGAGC +
Preference number: 4 (lower is better)
Translates to: RPQQTSHHHQVGDPRSSYYKQDS*FQKPPS
Trigger: GCTCGGAGGTTTTTGAAATCATGAATCCTGTTTATA...GTAGCTGCTTCTGGGATCACCCACCTGATGGTGGTGACTTGTCTGCTGAGGCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409185.5
CDS-3UTR GCA 90 bp CTAAGTGTCGAGAGCATTAAGAAGAAAGTCCTGGTTGGAGGCGCAAGGCCTGCATTGCTTTGTGCCAAGTaGCCTCAGCTGCAAAAGAGA +
Preference number: 4 (lower is better)
Translates to: LSVESIKKKVLVGGARPALLCAK*PQLQKR
Trigger: TCTCTTTTGCAGCTGAGGGCACTTGGCACAAAGCAA...TGCAGGCCTTGCGCCTCCAACCAGGACTTTCTTCTTAATGCTCTCGACACTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp AGATGGAATTACCAACAGAGACTTGAAGAAAGGGGCACAAACTGTGTGCCTGCGCACAAACTGTGTGCCTaGGGTAAATGTCTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: RWNYQQRLEERGTNCVPAHKLCA*GKCLPP
Trigger: TGGGGGCAGACATTTACCGCAGGCACACAGTTTGTG...CGCAGGCACACAGTTTGTGCCCCTTTCTTCAAGTCTCTGTTGGTAATTCCATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp GAGCGGCAAGTTCATGGGTCACTGGCTCACACTAAATGCTCAGCCGCCAGCACAGAATGCTCCACCATATaGTTCGGGACAAATTATGAA +
Preference number: 4 (lower is better)
Translates to: ERQVHGSLAHTKCSAASTECSTI*FGTNYE
Trigger: TTCATAATTTGTCCCGAAGCATATGGTGGAGCATTC...TGTGCTGGCGGCTGAGCATTTAGTGTGAGCCAGTGACCCATGAACTTGCCGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp CTAGACCTCATTCATCACAGCCAGATGATGCCACCAGAAAGAGCAAGGTACTGTCTGGCTCACACTAAATaGTCAGCCGCCAGCACAGAT +
Preference number: 4 (lower is better)
Translates to: LDLIHHSQMMPPERARYCLAHTK*SAASTD
Trigger: ATCTGTGCTGGCGGCTGAGCATTTAGTGTGAGCCAG...ACAGTACCTTGCTCTTTCTGGTGGCATCATCTGGCTGTGATGAATGAGGTCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp CTAGACCTCATTCATCACAGCCAGATGATGCCACCAGAAAGAGCAAGGTACTGTGTCCACATCCCTAACTaGCAACCCACATCAACCCCA +
Preference number: 4 (lower is better)
Translates to: LDLIHHSQMMPPERARYCVHIPN*QPTSTP
Trigger: TGGGGTTGATGTGGGTTGCCAGTTAGGGATGTGGAC...ACAGTACCTTGCTCTTTCTGGTGGCATCATCTGGCTGTGATGAATGAGGTCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp TTGAGCCCCTGGAGCCCTCAGGACCTACTGATAAAGCATGTCCTCTGCAGTATACGACATGCACTCTCATaGATACAGGACGGGCATATT +
Preference number: 4 (lower is better)
Translates to: LSPWSPQDLLIKHVLCSIRHALS*IQDGHI
Trigger: AATATGCCCGTCCTGTATCCATGAGAGTGCATGTCG...TATACTGCAGAGGACATGCTTTATCAGTAGGTCCTGAGGGCTCCAGGGGCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp TTCAGTCCTGTGGACCAAGATAAGGCTATCCCCACAGGCTCTCTCTTCTTCAAAGGGCAACAGCCAAACTaGCGACAATGGACACATCCA +
Preference number: 4 (lower is better)
Translates to: FSPVDQDKAIPTGSLFFKGQQPN*RQWTHP
Trigger: TGGATGTGTCCATTGTCGCCAGTTTGGCTGTTGCCC...TTTGAAGAAGAGAGAGCCTGTGGGGATAGCCTTATCTTGGTCCACAGGACTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp TTGAGCCCCTGGAGCCCTCAGGACCTACTGATAAAGCATGTCCTCTGCAGTATAAACTTCTGTGTTACTTaGTCAGTTGAGCCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: LSPWSPQDLLIKHVLCSINFCVT*SVEPLE
Trigger: CTCCAGGGGCTCAACTGACCAAGTAACACAGAAGTT...TATACTGCAGAGGACATGCTTTATCAGTAGGTCCTGAGGGCTCCAGGGGCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp ACTGATAAAGCATGTCCTCTGCAGTATACTCAAGAGTCTGCTGCCCTTCAGAAACTGTCATGCCAGTCCTaGGAGCACACCACCCTTCTG +
Preference number: 4 (lower is better)
Translates to: TDKACPLQYTQESAALQKLSCQS*EHTTLL
Trigger: CAGAAGGGTGGTGTGCTCCCAGGACTGGCATGACAG...TTTCTGAAGGGCAGCAGACTCTTGAGTATACTGCAGAGGACATGCTTTATCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp GAGCGGCAAGTTCATGGGTCACTGGCTCACACTAAATGCTCAGCCGCCAGCACATTCCATTCCTTGGCATaGATACGTAAGTTCAATGCA +
Preference number: 4 (lower is better)
Translates to: ERQVHGSLAHTKCSAASTFHSLA*IRKFNA
Trigger: TGCATTGAACTTACGTATCCATGCCAAGGAATGGAA...TGTGCTGGCGGCTGAGCATTTAGTGTGAGCCAGTGACCCATGAACTTGCCGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR TCA 90 bp TGGTCAGCTGAACCCCTGGAACCGTTAGAACCTACTAATCCTGCCAACCATCCACAATTGACACCTAACTaGACTGGCTCAGGATGGAAA +
Preference number: 4 (lower is better)
Translates to: WSAEPLEPLEPTNPANHPQLTPN*TGSGWK
Trigger: TTTCCATCCTGAGCCAGTTCAGTTAGGTGTCAATTG...TGGATGGTTGGCAGGATTAGTAGGTTCTAACGGTTCCAGGGGTTCAGCTGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp AGAAAGGGGCACAAACTGTGTGCCTGCGGTAAATGTCTGCCCCCACACATAGACACACTTTGTAAGGTGTaGCAGGAGTGTAACCTGTTT +
Preference number: 4 (lower is better)
Translates to: RKGHKLCACGKCLPPHIDTLCKV*QECNLF
Trigger: AAACAGGTTACACTCCTGGCACACCTTACAAAGTGT...GTCTATGTGTGGGGGCAGACATTTACCGCAGGCACACAGTTTGTGCCCCTTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp ACTGATAAAGCATGTCCTCTGCAGTATACTCAAGAGTCTGCTGCCCTTCAGAAAGCTGTGTGTAGTACGTaGCTTGCTGTGCATACGGGC +
Preference number: 4 (lower is better)
Translates to: TDKACPLQYTQESAALQKAVCST*LAVHTG
Trigger: GCCCGTATGCACAGCAAGGCACGTACTACACACAGC...TTTCTGAAGGGCAGCAGACTCTTGAGTATACTGCAGAGGACATGCTTTATCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp ACTGGCAACCCACATCAACCCCAAAAGGTTGAAGAATCATCTAAGATATTTCAGAGCAGGGTACACCGTTaGAGGCATGCCGTTGGGCTG +
Preference number: 4 (lower is better)
Translates to: TGNPHQPQKVEESSKIFQSRVHR*RHAVGL
Trigger: CAGCCCAACGGCATGCCTGCAACGGTGTACCCTGCT...CTGAAATATCTTAGATGATTCTTCAACCTTTTGGGGTTGATGTGGGTTGCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp ACCCCAAGGCTCAGGACCACCCCCATTGCCTGTGAACACATTTGCATAGCACTCAGTCAGAAAGATTTCTaGACGGATGTGCAATGCAAA +
Preference number: 4 (lower is better)
Translates to: TPRLRTTPIACEHICIALSQKDF*TDVQCK
Trigger: TTTGCATTGCACATCCGTGCAGAAATCTTTCTGACT...GAGTGCTATGCAAATGTGTTCACAGGCAATGGGGGTGGTCCTGAGCCTTGGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp AGATGGAATTACCAACAGAGACTTGAAGAAAGGGGCACAAACTGTGTGCCTGCGAGGCCAACCACACTCTaGTTTAGAGACCCTCTCAGA +
Preference number: 4 (lower is better)
Translates to: RWNYQQRLEERGTNCVPARPTTL*FRDPLR
Trigger: TCTGAGAGGGTCTCTAAAGCAGAGTGTGGTTGGCCT...CGCAGGCACACAGTTTGTGCCCCTTTCTTCAAGTCTCTGTTGGTAATTCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp AGATGGAATTACCAACAGAGACTTGAAGAAAGGGGCACAAACTGTGTGCCTGCGGGGAACACTCACAAATaGAGAGGTACTAGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: RWNYQQRLEERGTNCVPAGNTHK*RGTRGE
Trigger: CTCCCCTCTAGTACCTCTGCATTTGTGAGTGTTCCC...CGCAGGCACACAGTTTGTGCCCCTTTCTTCAAGTCTCTGTTGGTAATTCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp TTGAGCCCCTGGAGCCCTCAGGACCTACTGATAAAGCATGTCCTCTGCAGTATACATGGGAAAACCAGCTaGATAACCAATTCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: LSPWSPQDLLIKHVLCSIHGKTS*ITNSFG
Trigger: GCCAAAGGAATTGGTTATCCAGCTGGTTTTCCCATG...TATACTGCAGAGGACATGCTTTATCAGTAGGTCCTGAGGGCTCCAGGGGCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp AGATGGAATTACCAACAGAGACTTGAAGAAAGGGGCACAAACTGTGTGCCTGCGTTAAGAAGAAAGTCCTaGTTGGAGGCGCAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: RWNYQQRLEERGTNCVPALRRKS*LEAQGL
Trigger: CAGGCCTTGCGCCTCCAACCAGGACTTTCTTCTTAA...CGCAGGCACACAGTTTGTGCCCCTTTCTTCAAGTCTCTGTTGGTAATTCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp CAGCACTCACTGGCACTCACAGGTGCCTTACATACCTTACGGGGGCCAACACTGCATCCACTAAACAGATaGAATTACCAACAGAGACTT +
Preference number: 4 (lower is better)
Translates to: QHSLALTGALHTLRGPTLHPLNR*NYQQRL
Trigger: AAGTCTCTGTTGGTAATTCCATCTGTTTAGTGGATG...CAGTGTTGGCCCCCGTAAGGTATGTAAGGCACCTGTGAGTGCCAGTGAGTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp AAATTCCTCTCCCACAATAAACCCTGCCAGCAAACGCACTCCAGCACTGCCTGGATAACTAGTACATGTTaGCCTTTCACCAGCACTCAC +
Preference number: 4 (lower is better)
Translates to: KFLSHNKPCQQTHSSTAWITSTC*PFTSTH
Trigger: GTGAGTGCTGGTGAAAGGCCAACATGTACTAGTTAT...CCAGGCAGTGCTGGAGTGCGTTTGCTGGCAGGGTTTATTGTGGGAGAGGAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp ACTGGCAACCCACATCAACCCCAAAAGGTTGAAGAATCATCTAAGATATTTCAGCTGCACAGGGACTCATaGGCACAGCCTGTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: TGNPHQPQKVEESSKIFQLHRDS*AQPVVR
Trigger: CCTCACCACAGGCTGTGCCCATGAGTCCCTGTGCAG...CTGAAATATCTTAGATGATTCTTCAACCTTTTGGGGTTGATGTGGGTTGCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp ACTCTGGCCCTCACAGAGCGGCAAGTTCATGGGTCACTGGCTCACACTAAATGCTTCCATTCCTTGGCATaGATACGTAAGTTCAATGCA +
Preference number: 4 (lower is better)
Translates to: TLALTERQVHGSLAHTKCFHSLA*IRKFNA
Trigger: TGCATTGAACTTACGTATCCATGCCAAGGAATGGAA...GCATTTAGTGTGAGCCAGTGACCCATGAACTTGCCGCTCTGTGAGGGCCAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR TCA 90 bp AAATTCCTCTCCCACAATAAACCCTGCCAGCAAACGCACTCCAGCACTGCCTGGTTCATAACATACAGCTaGAACCTTTGCCCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: KFLSHNKPCQQTHSSTAWFITYS*NLCPSL
Trigger: CAAAGAAGGGCAAAGGTTTCAGCTGTATGTTATGAA...CCAGGCAGTGCTGGAGTGCGTTTGCTGGCAGGGTTTATTGTGGGAGAGGAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR TCA 90 bp GGTCACTGGCTCACACTAAATGCTCAGCCGCCAGCACAGATCCAAACAAGACCTCCTATGACAGTTTTGTaGCTATTTCCTAAGTCCAGA +
Preference number: 4 (lower is better)
Translates to: GHWLTLNAQPPAQIQTRPPMTVL*LFPKSR
Trigger: TCTGGACTTAGGAAATAGTCACAAAACTGTCATAGG...AGGTCTTGTTTGGATCTGTGCTGGCGGCTGAGCATTTAGTGTGAGCCAGTGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR TCA 90 bp ACTGGCAACCCACATCAACCCCAAAAGGTTGAAGAATCATCTAAGATATTTCAGTGTTACTTGGTCAGTTaGGCCCCTGGAGCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: TGNPHQPQKVEESSKIFQCYLVS*APGALR
Trigger: CCTGAGGGCTCCAGGGGCTCAACTGACCAAGTAACA...CTGAAATATCTTAGATGATTCTTCAACCTTTTGGGGTTGATGTGGGTTGCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp ACTGATAAAGCATGTCCTCTGCAGTATACTCAAGAGTCTGCTGCCCTTCAGAAATCTGCTGTCTGTGCTTaGTTTGTGCCAAGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: TDKACPLQYTQESAALQKSAVCA*FVPSAL
Trigger: GAGGGCACTTGGCACAAAGCAAGCACAGACAGCAGA...TTTCTGAAGGGCAGCAGACTCTTGAGTATACTGCAGAGGACATGCTTTATCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp AAATTCCTCTCCCACAATAAACCCTGCCAGCAAACGCACTCCAGCACTGCCTGGAGTCAGAAAGATTTCTaGACGGATGTGCAATGCAAA +
Preference number: 4 (lower is better)
Translates to: KFLSHNKPCQQTHSSTAWSQKDF*TDVQCK
Trigger: TTTGCATTGCACATCCGTGCAGAAATCTTTCTGACT...CCAGGCAGTGCTGGAGTGCGTTTGCTGGCAGGGTTTATTGTGGGAGAGGAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp CAGCACTCACTGGCACTCACAGGTGCCTTACATACCTTACGGGGGCCAACACTGACGTTTCCATTCCTTTaGATTTTGCATATGATGGTT +
Preference number: 4 (lower is better)
Translates to: QHSLALTGALHTLRGPTLTFPFL*ILHMMV
Trigger: AACCATCATATGCAAAATCCAAAGGAATGGAAACGT...CAGTGTTGGCCCCCGTAAGGTATGTAAGGCACCTGTGAGTGCCAGTGAGTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp TGGTCAGCTGAACCCCTGGAACCGTTAGAACCTACTAATCCTGCCAACCATCCATACCTCCTGCAAGCATaGCTGTTTCTCTTTCACATT +
Preference number: 4 (lower is better)
Translates to: WSAEPLEPLEPTNPANHPYLLQA*LFLFHI
Trigger: AATGTGAAAGAGAAACAGCCATGCTTGCAGGAGGTA...TGGATGGTTGGCAGGATTAGTAGGTTCTAACGGTTCCAGGGGTTCAGCTGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp ACTGGCAACCCACATCAACCCCAAAAGGTTGAAGAATCATCTAAGATATTTCAGCTGTCATGCCAGTCCTaGGAGCACACCACCCTTCTG +
Preference number: 4 (lower is better)
Translates to: TGNPHQPQKVEESSKIFQLSCQS*EHTTLL
Trigger: CAGAAGGGTGGTGTGCTCCCAGGACTGGCATGACAG...CTGAAATATCTTAGATGATTCTTCAACCTTTTGGGGTTGATGTGGGTTGCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR TCA 90 bp TTGAGCCCCTGGAGCCCTCAGGACCTACTGATAAAGCATGTCCTCTGCAGTATATTCATAACATACAGCTaGAACCTTTGCCCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: LSPWSPQDLLIKHVLCSIFITYS*NLCPSL
Trigger: CAAAGAAGGGCAAAGGTTTCAGCTGTATGTTATGAA...TATACTGCAGAGGACATGCTTTATCAGTAGGTCCTGAGGGCTCCAGGGGCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp CACCAGAAAGAGCAAGGTACTGTATGCCCAGCTGGGGAAGGGCAAGACACTCACATTTCTGCACGGATGTaGAATGCAAACTTATTTCAT +
Preference number: 4 (lower is better)
Translates to: HQKEQGTVCPAGEGQDTHISARM*NANLFH
Trigger: ATGAAATAAGTTTGCATTGCACATCCGTGCAGAAAT...GTGAGTGTCTTGCCCTTCCCCAGCTGGGCATACAGTACCTTGCTCTTTCTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp CTAGACCTCATTCATCACAGCCAGATGATGCCACCAGAAAGAGCAAGGTACTGTAGACATAAAAGGTTCTaGAAGTGCCTTCAGGCCCAT +
Preference number: 4 (lower is better)
Translates to: LDLIHHSQMMPPERARYCRHKRF*KCLQAH
Trigger: ATGGGCCTGAAGGCACTTCCAGAACCTTTTATGTCT...ACAGTACCTTGCTCTTTCTGGTGGCATCATCTGGCTGTGATGAATGAGGTCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp TTGAGCCCCTGGAGCCCTCAGGACCTACTGATAAAGCATGTCCTCTGCAGTATAGGAAATTCCATTCCTTaGCATGGATACGTAAGTTCA +
Preference number: 4 (lower is better)
Translates to: LSPWSPQDLLIKHVLCSIGNSIP*HGYVSS
Trigger: TGAACTTACGTATCCATGCCAAGGAATGGAATTTCC...TATACTGCAGAGGACATGCTTTATCAGTAGGTCCTGAGGGCTCCAGGGGCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR TCA 90 bp AGGACCACCCCCATTGCCTGTGAACACATTTGCATAGCACTCAAGAAGGTTTCCCCTATGACAGTTTTGTaGCTATTTCCTAAGTCCAGA +
Preference number: 4 (lower is better)
Translates to: RTTPIACEHICIALKKVSPMTVL*LFPKSR
Trigger: TCTGGACTTAGGAAATAGTCACAAAACTGTCATAGG...GGAAACCTTCTTGAGTGCTATGCAAATGTGTTCACAGGCAATGGGGGTGGTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR TCA 90 bp AGGACCACCCCCATTGCCTGTGAACACATTTGCATAGCACTCAAGAAGGTTTCCATGTCCATGTTTACATaGACTAGGTCCTTTGCTTAC +
Preference number: 4 (lower is better)
Translates to: RTTPIACEHICIALKKVSMSMFT*TRSFAY
Trigger: GTAAGCAAAGGACCTAGTTCATGTAAACATGGACAT...GGAAACCTTCTTGAGTGCTATGCAAATGTGTTCACAGGCAATGGGGGTGGTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR TCA 90 bp ACTGGCAACCCACATCAACCCCAAAAGGTTGAAGAATCATCTAAGATATTTCAGCAAACAAGACCTCCATaGGCAGAGAAACTGCAGCGG +
Preference number: 4 (lower is better)
Translates to: TGNPHQPQKVEESSKIFQQTRPP*AEKLQR
Trigger: CCGCTGCAGTTTCTCTGCTCATGGAGGTCTTGTTTG...CTGAAATATCTTAGATGATTCTTCAACCTTTTGGGGTTGATGTGGGTTGCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp ACTGGCAACCCACATCAACCCCAAAAGGTTGAAGAATCATCTAAGATATTTCAGATAGGCAGGAGCTGCTaGTGCATAGCCCATGGGAAA +
Preference number: 4 (lower is better)
Translates to: TGNPHQPQKVEESSKIFQIGRSC*CIAHGK
Trigger: TTTCCCATGGGCTATGCAGCAGCAGCTCCTGCCTAT...CTGAAATATCTTAGATGATTCTTCAACCTTTTGGGGTTGATGTGGGTTGCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp ACTGGCAACCCACATCAACCCCAAAAGGTTGAAGAATCATCTAAGATATTTCAGCTGGCTCACACTAAATaGTCAGCCGCCAGCACAGAT +
Preference number: 4 (lower is better)
Translates to: TGNPHQPQKVEESSKIFQLAHTK*SAASTD
Trigger: ATCTGTGCTGGCGGCTGAGCATTTAGTGTGAGCCAG...CTGAAATATCTTAGATGATTCTTCAACCTTTTGGGGTTGATGTGGGTTGCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp TTCAGTCCTGTGGACCAAGATAAGGCTATCCCCACAGGCTCTCTCTTCTTCAAATTTGCCCTTCTTTGTTaGGGAAAAACAGCAATGCCT +
Preference number: 4 (lower is better)
Translates to: FSPVDQDKAIPTGSLFFKFALLC*GKTAMP
Trigger: AGGCATTGCTGTTTTTCCCCAACAAAGAAGGGCAAA...TTTGAAGAAGAGAGAGCCTGTGGGGATAGCCTTATCTTGGTCCACAGGACTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp AGATGGAATTACCAACAGAGACTTGAAGAAAGGGGCACAAACTGTGTGCCTGCGTTTGCCCTTCTTTGTTaGGGAAAAACAGCAATGCCT +
Preference number: 4 (lower is better)
Translates to: RWNYQQRLEERGTNCVPAFALLC*GKTAMP
Trigger: AGGCATTGCTGTTTTTCCCCAACAAAGAAGGGCAAA...CGCAGGCACACAGTTTGTGCCCCTTTCTTCAAGTCTCTGTTGGTAATTCCATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp CTAAGTGTCGAGAGCATTAAGAAGAAAGTCCTGGTTGGAGGCGCAAGGCCTGCAAACGTTCTTAACAGATaGCTCACGAGAGACATAAAA +
Preference number: 4 (lower is better)
Translates to: LSVESIKKKVLVGGARPANVLNR*LTRDIK
Trigger: TTTTATGTCTCTCGTGAGCCATCTGTTAAGAACGTT...TGCAGGCCTTGCGCCTCCAACCAGGACTTTCTTCTTAATGCTCTCGACACTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp TTGAGCCCCTGGAGCCCTCAGGACCTACTGATAAAGCATGTCCTCTGCAGTATAAACGTTCTTAACAGATaGCTCACGAGAGACATAAAA +
Preference number: 4 (lower is better)
Translates to: LSPWSPQDLLIKHVLCSINVLNR*LTRDIK
Trigger: TTTTATGTCTCTCGTGAGCCATCTGTTAAGAACGTT...TATACTGCAGAGGACATGCTTTATCAGTAGGTCCTGAGGGCTCCAGGGGCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR TCA 90 bp CTAGACCTCATTCATCACAGCCAGATGATGCCACCAGAAAGAGCAAGGTACTGTTTTAAAAAGGACAGGTaGAGTCTGGGTCTCCTTTTT +
Preference number: 4 (lower is better)
Translates to: LDLIHHSQMMPPERARYCFKKDR*SLGLLF
Trigger: AAAAAGGAGACCCAGACTTCACCTGTCCTTTTTAAA...ACAGTACCTTGCTCTTTCTGGTGGCATCATCTGGCTGTGATGAATGAGGTCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR TCA 90 bp TTCAGTCCTGTGGACCAAGATAAGGCTATCCCCACAGGCTCTCTCTTCTTCAAATTTAAAAAGGACAGGTaGAGTCTGGGTCTCCTTTTT +
Preference number: 4 (lower is better)
Translates to: FSPVDQDKAIPTGSLFFKFKKDR*SLGLLF
Trigger: AAAAAGGAGACCCAGACTTCACCTGTCCTTTTTAAA...TTTGAAGAAGAGAGAGCCTGTGGGGATAGCCTTATCTTGGTCCACAGGACTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp ACTGATAAAGCATGTCCTCTGCAGTATACTCAAGAGTCTGCTGCCCTTCAGAAAACATATCCACGGCCCTaGCTTTCTACAAGAAATTGG +
Preference number: 4 (lower is better)
Translates to: TDKACPLQYTQESAALQKTYPRP*LSTRNW
Trigger: CCAATTTCTTGTAGAAAGGCAGGGCCGTGGATATGT...TTTCTGAAGGGCAGCAGACTCTTGAGTATACTGCAGAGGACATGCTTTATCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp ACTGGCAACCCACATCAACCCCAAAAGGTTGAAGAATCATCTAAGATATTTCAGCCAAACTGGCGACAATaGACACATCCAACAGTCAGC +
Preference number: 4 (lower is better)
Translates to: TGNPHQPQKVEESSKIFQPNWRQ*THPTVS
Trigger: GCTGACTGTTGGATGTGTCCATTGTCGCCAGTTTGG...CTGAAATATCTTAGATGATTCTTCAACCTTTTGGGGTTGATGTGGGTTGCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR TCA 90 bp ACTGATAAAGCATGTCCTCTGCAGTATACTCAAGAGTCTGCTGCCCTTCAGAAATCACTGCAGGTAGATTaGGCAAGCTTTTTGTGTTTG +
Preference number: 4 (lower is better)
Translates to: TDKACPLQYTQESAALQKSLQVD*ASFLCL
Trigger: CAAACACAAAAAGCTTGCTCAATCTACCTGCAGTGA...TTTCTGAAGGGCAGCAGACTCTTGAGTATACTGCAGAGGACATGCTTTATCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR TCA 90 bp ACTGGCAACCCACATCAACCCCAAAAGGTTGAAGAATCATCTAAGATATTTCAGTTCATCACAGCCAGATaGTGCCACCAGAAAGAGCAA +
Preference number: 4 (lower is better)
Translates to: TGNPHQPQKVEESSKIFQFITAR*CHQKEQ
Trigger: TTGCTCTTTCTGGTGGCATCATCTGGCTGTGATGAA...CTGAAATATCTTAGATGATTCTTCAACCTTTTGGGGTTGATGTGGGTTGCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp ACTGGCAACCCACATCAACCCCAAAAGGTTGAAGAATCATCTAAGATATTTCAGCGACATGCACTCTCATaGATACAGGACGGGCATATT +
Preference number: 4 (lower is better)
Translates to: TGNPHQPQKVEESSKIFQRHALS*IQDGHI
Trigger: AATATGCCCGTCCTGTATCCATGAGAGTGCATGTCG...CTGAAATATCTTAGATGATTCTTCAACCTTTTGGGGTTGATGTGGGTTGCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR TCA 90 bp ACTGATAAAGCATGTCCTCTGCAGTATACTCAAGAGTCTGCTGCCCTTCAGAAAGTCCAGATTCTTACCTaGTATCTACCTTTCGTATCT +
Preference number: 4 (lower is better)
Translates to: TDKACPLQYTQESAALQKVQILT*YLPFVS
Trigger: AGATACGAAAGGTAGATATCAGGTAAGAATCTGGAC...TTTCTGAAGGGCAGCAGACTCTTGAGTATACTGCAGAGGACATGCTTTATCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp AGATGGAATTACCAACAGAGACTTGAAGAAAGGGGCACAAACTGTGTGCCTGCGACGTTTCCATTCCTTTaGATTTTGCATATGATGGTT +
Preference number: 4 (lower is better)
Translates to: RWNYQQRLEERGTNCVPATFPFL*ILHMMV
Trigger: AACCATCATATGCAAAATCCAAAGGAATGGAAACGT...CGCAGGCACACAGTTTGTGCCCCTTTCTTCAAGTCTCTGTTGGTAATTCCATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp ACTGGCAACCCACATCAACCCCAAAAGGTTGAAGAATCATCTAAGATATTTCAGAGACATAAAAGGTTCTaGAAGTGCCTTCAGGCCCAT +
Preference number: 4 (lower is better)
Translates to: TGNPHQPQKVEESSKIFQRHKRF*KCLQAH
Trigger: ATGGGCCTGAAGGCACTTCCAGAACCTTTTATGTCT...CTGAAATATCTTAGATGATTCTTCAACCTTTTGGGGTTGATGTGGGTTGCCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CCA 90 bp ACTGGCAACCCACATCAACCCCAAAAGGTTGAAGAATCATCTAAGATATTTCAGTTCACTTCAGTCCTGTaGACCAAGATAAGGCTATCC +
Preference number: 4 (lower is better)
Translates to: TGNPHQPQKVEESSKIFQFTSVL*TKIRLS
Trigger: GGATAGCCTTATCTTGGTCCACAGGACTGAAGTGAA...CTGAAATATCTTAGATGATTCTTCAACCTTTTGGGGTTGATGTGGGTTGCCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR GCA 90 bp ACTGATAAAGCATGTCCTCTGCAGTATACTCAAGAGTCTGCTGCCCTTCAGAAAATTTCTGCACGGATGTaGAATGCAAACTTATTTCAT +
Preference number: 4 (lower is better)
Translates to: TDKACPLQYTQESAALQKISARM*NANLFH
Trigger: ATGAAATAAGTTTGCATTGCACATCCGTGCAGAAAT...TTTCTGAAGGGCAGCAGACTCTTGAGTATACTGCAGAGGACATGCTTTATCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
3UTR CAA 72 bp ATATACCACTTTCTTCATAACATACAGCTGAAACCTTaGCCCTTCTTTGTTGGGGAAAAACAGCAATGCCTA +
Preference number: 4 (lower is better)
Translates to: IYHFLHNIQLKP*PFFVGEKQQCL
Trigger: TAGGCATTGCTGTTTTTCCCCAACAAAGAAGGGCAAAGGTTTCAGCTGTATGTTATGAAGAAAGTGGTATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS TCA 90 bp ATTCATGATTTCAAAAACGCGCCGCGGCGGCGACCTGGGCCTCAGTaGCCAGCGCACGCCGGCCCGCGGCGGGCTTGGCCGTGGGGCGAA +
Preference number: 5 (lower is better)
Translates to: IHDFKNAPRRRPGPQ*PAHAGPRRAWPWGE
Trigger: TTCGCCCCACGGCCAAGCCCGCCGCGGGCCGGCGTGCGCTGGTCACTGAGGCCCAGGTCGCCGCCGCGGCGCGTTTTTGAAATCATGAAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389915.4
CDS-3UTR CAA 90 bp TGCTGCGCCCAATGGAGGTCCTGTCCTGTCCGGGCAACAGCCAAACTGGCGACAGAGCAGGGTACACCGTaGCAGGCATGCCGTTGGGCT +
Preference number: 5 (lower is better)
Translates to: CCAQWRSCPVRATAKLATEQGTP*QACRWA
Trigger: AGCCCAACGGCATGCCTGCAACGGTGTACCCTGCTC...TGTCGCCAGTTTGGCTGTTGCCCGGACAGGACAGGACCTCCATTGGGCGCAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CAA 90 bp CCTGCTGCTGCGCCCAATGGAGGTCCTGTCCTGTCCGGGCAACAGCCAAACTGGTGTGTAGTACGTGCCTaGCTGTGCATACGGGCTCTG +
Preference number: 5 (lower is better)
Translates to: PAAAPNGGPVLSGQQPNWCVVRA*LCIRAL
Trigger: CAGAGCCCGTATGCACAGCAAGGCACGTACTACACA...CCAGTTTGGCTGTTGCCCGGACAGGACAGGACCTCCATTGGGCGCAGCAGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CAA 90 bp CCTGCTGCTGCGCCCAATGGAGGTCCTGTCCTGTCCGGGCAACAGCCAAACTGGTCAGGACCACCCCCATaGCCTGTGAACACATTTGCA +
Preference number: 5 (lower is better)
Translates to: PAAAPNGGPVLSGQQPNWSGPPP*PVNTFA
Trigger: TGCAAATGTGTTCACAGGCAATGGGGGTGGTCCTGA...CCAGTTTGGCTGTTGCCCGGACAGGACAGGACCTCCATTGGGCGCAGCAGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CAA 90 bp GGTCACTGGCTCACACTAAATGCTCAGCCGCCAGCACAGATCCAAACAAGACCTGTTGCAGGCATGCCGTaGGGCTGCACCACCGTGGTG +
Preference number: 5 (lower is better)
Translates to: GHWLTLNAQPPAQIQTRPVAGMP*GCTTVV
Trigger: CACCACGGTGGTGCAGCCCAACGGCATGCCTGCAAC...AGGTCTTGTTTGGATCTGTGCTGGCGGCTGAGCATTTAGTGTGAGCCAGTGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CAA 90 bp AAATTCCTCTCCCACAATAAACCCTGCCAGCAAACGCACTCCAGCACTGCCTGGGAGCAGGGTACACCGTaGCAGGCATGCCGTTGGGCT +
Preference number: 5 (lower is better)
Translates to: KFLSHNKPCQQTHSSTAWEQGTP*QACRWA
Trigger: AGCCCAACGGCATGCCTGCAACGGTGTACCCTGCTC...CCAGGCAGTGCTGGAGTGCGTTTGCTGGCAGGGTTTATTGTGGGAGAGGAATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CAA 90 bp ACTCTGGCCCTCACAGAGCGGCAAGTTCATGGGTCACTGGCTCACACTAAATGCAGAAGAAAGTCCTGGTaGGAGGCGCAAGGCCTGCAG +
Preference number: 5 (lower is better)
Translates to: TLALTERQVHGSLAHTKCRRKSW*EAQGLQ
Trigger: CTGCAGGCCTTGCGCCTCCAACCAGGACTTTCTTCT...GCATTTAGTGTGAGCCAGTGACCCATGAACTTGCCGCTCTGTGAGGGCCAGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CAA 90 bp TGGCCCAGCTGCCTTGCCCACTGGTCTGCACAGGGACTCATGGGCACAGCCTGTATACAGCTGAAACCTTaGCCCTTCTTTGTTGGGGAA +
Preference number: 5 (lower is better)
Translates to: WPSCLAHWSAQGLMGTACIQLKP*PFFVGE
Trigger: TTCCCCAACAAAGAAGGGCAAAGGTTTCAGCTGTAT...ACAGGCTGTGCCCATGAGTCCCTGTGCAGACCAGTGGGCAAGGCAGCTGGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS TCA 90 bp GGAGGCGCAAGGCCTGCAGCACCAGCTGTGGAATCCCCAATAATGTaGCTGCACAGCTCCGTCCTCAAACATTTGCAGGTGATCACCACT +
Preference number: 5 (lower is better)
Translates to: GGARPAAPAVESPIM*LHSSVLKHLQVITT
Trigger: AGTGGTGATCACCTGCAAATGTTTGAGGACGGAGCTGTGCAGTCACATTATTGGGGATTCCACAGCTGGTGCTGCAGGCCTTGCGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CAA 90 bp ACTCTGGCCCTCACAGAGCGGCAAGTTCATGGGTCACTGGCTCACACTAAATGCCTCTGCTGTCTGTGCTaGCTTTGTGCCAAGTGCCCT +
Preference number: 5 (lower is better)
Translates to: TLALTERQVHGSLAHTKCLCCLC*LCAKCP
Trigger: AGGGCACTTGGCACAAAGCAAGCACAGACAGCAGAG...GCATTTAGTGTGAGCCAGTGACCCATGAACTTGCCGCTCTGTGAGGGCCAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CAA 90 bp GTCCATGAACCAGCTGCACCCAAGCAGCTGTGGCTTCCCTACTCTCTCCCAAACTCCGTCCTCAAACATTaGCAGGTGATCACCACTGAG +
Preference number: 5 (lower is better)
Translates to: VHEPAAPKQLWLPYSLPNSVLKH*QVITTE
Trigger: CTCAGTGGTGATCACCTGCAAATGTTTGAGGACGGA...GTTTGGGAGAGAGTAGGGAAGCCACAGCTGCTTGGGTGCAGCTGGTTCATGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CAA 90 bp GAGCGGCAAGTTCATGGGTCACTGGCTCACACTAAATGCTCAGCCGCCAGCACATCCGTCCTCAAACATTaGCAGGTGATCACCACTGAG +
Preference number: 5 (lower is better)
Translates to: ERQVHGSLAHTKCSAASTSVLKH*QVITTE
Trigger: CTCAGTGGTGATCACCTGCAAATGTTTGAGGACGGA...TGTGCTGGCGGCTGAGCATTTAGTGTGAGCCAGTGACCCATGAACTTGCCGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CAA 90 bp CTCAAACCACCACTGCACTGGGAAGAAGACGCACGCTCCTGCCCTAGAGGCCGCAACCTTTGCCCTTCTTaGTTGGGGAAAAACAGCAAT +
Preference number: 5 (lower is better)
Translates to: LKPPLHWEEDARSCPRGRNLCPS*LGKNSN
Trigger: ATTGCTGTTTTTCCCCAACAAAGAAGGGCAAAGGTT...GCGGCCTCTAGGGCAGGAGCGTGCGTCTTCTTCCCAGTGCAGTGGTGGTTTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CAA 90 bp AGAAAGGGGCACAAACTGTGTGCCTGCGGTAAATGTCTGCCCCCACACATAGACCTCTGCTGTCTGTGCTaGCTTTGTGCCAAGTGCCCT +
Preference number: 5 (lower is better)
Translates to: RKGHKLCACGKCLPPHIDLCCLC*LCAKCP
Trigger: AGGGCACTTGGCACAAAGCAAGCACAGACAGCAGAG...GTCTATGTGTGGGGGCAGACATTTACCGCAGGCACACAGTTTGTGCCCCTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CAA 90 bp GTCCATGAACCAGCTGCACCCAAGCAGCTGTGGCTTCCCTACTCTCTCCCAAACCAATTCCTTTGGCATTaGCATAGGGAACCCCAGAAG +
Preference number: 5 (lower is better)
Translates to: VHEPAAPKQLWLPYSLPNQFLWH*HREPQK
Trigger: CTTCTGGGGTTCCCTATGCAAATGCCAAAGGAATTG...GTTTGGGAGAGAGTAGGGAAGCCACAGCTGCTTGGGTGCAGCTGGTTCATGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CAA 90 bp AGGACCACCCCCATTGCCTGTGAACACATTTGCATAGCACTCAAGAAGGTTTCCAGAAGAAAGTCCTGGTaGGAGGCGCAAGGCCTGCAG +
Preference number: 5 (lower is better)
Translates to: RTTPIACEHICIALKKVSRRKSW*EAQGLQ
Trigger: CTGCAGGCCTTGCGCCTCCAACCAGGACTTTCTTCT...GGAAACCTTCTTGAGTGCTATGCAAATGTGTTCACAGGCAATGGGGGTGGTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CAA 90 bp AAATTCCTCTCCCACAATAAACCCTGCCAGCAAACGCACTCCAGCACTGCCTGGAGGAGTGTAACCTGTTaGGAAGGTAGGATTCGCTCC +
Preference number: 5 (lower is better)
Translates to: KFLSHNKPCQQTHSSTAWRSVTC*EGRIRS
Trigger: GGAGCGAATCCTACCTTCCAAACAGGTTACACTCCT...CCAGGCAGTGCTGGAGTGCGTTTGCTGGCAGGGTTTATTGTGGGAGAGGAATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CAA 90 bp CGGCCTCAGCAGACAAGTCACCACCATCAGGTGGGTGATCCCAGAAGCAGCTACGTCACTGCAGGTAGATaGAGCAAGCTTTTTGTGTTT +
Preference number: 5 (lower is better)
Translates to: RPQQTSHHHQVGDPRSSYVTAGR*SKLFVF
Trigger: AAACACAAAAAGCTTGCTCAATCTACCTGCAGTGAC...GTAGCTGCTTCTGGGATCACCCACCTGATGGTGGTGACTTGTCTGCTGAGGCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CAA 90 bp CTCAAACCACCACTGCACTGGGAAGAAGACGCACGCTCCTGCCCTAGAGGCCGCTACGTTTCCATTCCTTaGGATTTTGCATATGATGGT +
Preference number: 5 (lower is better)
Translates to: LKPPLHWEEDARSCPRGRYVSIP*DFAYDG
Trigger: ACCATCATATGCAAAATCCAAAGGAATGGAAACGTA...GCGGCCTCTAGGGCAGGAGCGTGCGTCTTCTTCCCAGTGCAGTGGTGGTTTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CAA 90 bp GAGCGGCAAGTTCATGGGTCACTGGCTCACACTAAATGCTCAGCCGCCAGCACACAGCCCTCACAGGAGTaGTACATGTATGTTTCCATT +
Preference number: 5 (lower is better)
Translates to: ERQVHGSLAHTKCSAASTQPSQE*YMYVSI
Trigger: AATGGAAACATACATGTACAACTCCTGTGAGGGCTG...TGTGCTGGCGGCTGAGCATTTAGTGTGAGCCAGTGACCCATGAACTTGCCGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS GCA 90 bp GGTAGGATTCGCTCCAGGATACATGTTAGGAGAATAGGCAGGAGCTaGTGCTGCATAGCCCATGGGAAAACCAGCTGGATAACCAATTCC +
Preference number: 5 (lower is better)
Translates to: GRIRSRIHVRRIGRS*CCIAHGKTSWITNS
Trigger: GGAATTGGTTATCCAGCTGGTTTTCCCATGGGCTATGCAGCAGCAGCTCCTGCCTATTCTCCTAACATGTATCCTGGAGCGAATCCTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CAA 90 bp ACTGGCAACCCACATCAACCCCAAAAGGTTGAAGAATCATCTAAGATATTTCAGGTTGCAGGCATGCCGTaGGGCTGCACCACCGTGGTG +
Preference number: 5 (lower is better)
Translates to: TGNPHQPQKVEESSKIFQVAGMP*GCTTVV
Trigger: CACCACGGTGGTGCAGCCCAACGGCATGCCTGCAAC...CTGAAATATCTTAGATGATTCTTCAACCTTTTGGGGTTGATGTGGGTTGCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CAA 90 bp CAGCACTCACTGGCACTCACAGGTGCCTTACATACCTTACGGGGGCCAACACTGTTGCATATGATGGTTTaGCATCAGTCACTGCAGGTA +
Preference number: 5 (lower is better)
Translates to: QHSLALTGALHTLRGPTLLHMMV*HQSLQV
Trigger: TACCTGCAGTGACTGATGCAAAACCATCATATGCAA...CAGTGTTGGCCCCCGTAAGGTATGTAAGGCACCTGTGAGTGCCAGTGAGTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CAA 90 bp GGTCACTGGCTCACACTAAATGCTCAGCCGCCAGCACAGATCCAAACAAGACCTAGCAGAGAAACTGCTTaGCTGACACATAAACCACCC +
Preference number: 5 (lower is better)
Translates to: GHWLTLNAQPPAQIQTRPSRETA*LTHKPP
Trigger: GGGTGGTTTATGTGTCAGCAAAGCAGTTTCTCTGCT...AGGTCTTGTTTGGATCTGTGCTGGCGGCTGAGCATTTAGTGTGAGCCAGTGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CAA 90 bp AGATGGAATTACCAACAGAGACTTGAAGAAAGGGGCACAAACTGTGTGCCTGCGCTGTCTGTGCTTGCTTaGTGCCAAGTGCCCTCAGCT +
Preference number: 5 (lower is better)
Translates to: RWNYQQRLEERGTNCVPALSVLA*CQVPSA
Trigger: AGCTGAGGGCACTTGGCACAAAGCAAGCACAGACAG...CGCAGGCACACAGTTTGTGCCCCTTTCTTCAAGTCTCTGTTGGTAATTCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CAA 90 bp CTAGACCTCATTCATCACAGCCAGATGATGCCACCAGAAAGAGCAAGGTACTGTCTGTCTGTGCTTGCTTaGTGCCAAGTGCCCTCAGCT +
Preference number: 5 (lower is better)
Translates to: LDLIHHSQMMPPERARYCLSVLA*CQVPSA
Trigger: AGCTGAGGGCACTTGGCACAAAGCAAGCACAGACAG...ACAGTACCTTGCTCTTTCTGGTGGCATCATCTGGCTGTGATGAATGAGGTCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CAA 90 bp GGTCACTGGCTCACACTAAATGCTCAGCCGCCAGCACAGATCCAAACAAGACCTCATGAACTAGGTCCTTaGCTTACCTGCTGTCTCAAC +
Preference number: 5 (lower is better)
Translates to: GHWLTLNAQPPAQIQTRPHELGP*LTCCLN
Trigger: GTTGAGACAGCAGGTAAGCAAAGGACCTAGTTCATG...AGGTCTTGTTTGGATCTGTGCTGGCGGCTGAGCATTTAGTGTGAGCCAGTGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS GCA 90 bp ATTCGCTCCAGGATACATGTTAGGAGAATAGGCAGGAGCTGCTGCTaGATAGCCCATGGGAAAACCAGCTGGATAACCAATTCCTTTGGC +
Preference number: 5 (lower is better)
Translates to: IRSRIHVRRIGRSCC*IAHGKTSWITNSFG
Trigger: GCCAAAGGAATTGGTTATCCAGCTGGTTTTCCCATGGGCTATGCAGCAGCAGCTCCTGCCTATTCTCCTAACATGTATCCTGGAGCGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CAA 90 bp ACTCTGGCCCTCACAGAGCGGCAAGTTCATGGGTCACTGGCTCACACTAAATGCGTCACTGCAGGTAGATaGAGCAAGCTTTTTGTGTTT +
Preference number: 5 (lower is better)
Translates to: TLALTERQVHGSLAHTKCVTAGR*SKLFVF
Trigger: AAACACAAAAAGCTTGCTCAATCTACCTGCAGTGAC...GCATTTAGTGTGAGCCAGTGACCCATGAACTTGCCGCTCTGTGAGGGCCAGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CAA 90 bp AGGACCACCCCCATTGCCTGTGAACACATTTGCATAGCACTCAAGAAGGTTTCCTTCCTCTCGTTACTGTaGTGTCCCCCAAGACACATG +
Preference number: 5 (lower is better)
Translates to: RTTPIACEHICIALKKVSFLSLL*CPPRHM
Trigger: CATGTGTCTTGGGGGACACAACAGTAACGAGAGGAA...GGAAACCTTCTTGAGTGCTATGCAAATGTGTTCACAGGCAATGGGGGTGGTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CAA 90 bp CACCAGAAAGAGCAAGGTACTGTATGCCCAGCTGGGGAAGGGCAAGACACTCACTGGAAATTCCATTCCTaGGCATGGATACGTAAGTTC +
Preference number: 5 (lower is better)
Translates to: HQKEQGTVCPAGEGQDTHWKFHS*AWIRKF
Trigger: GAACTTACGTATCCATGCCAAGGAATGGAATTTCCA...GTGAGTGTCTTGCCCTTCCCCAGCTGGGCATACAGTACCTTGCTCTTTCTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS GCA 90 bp AGGATTCGCTCCAGGATACATGTTAGGAGAATAGGCAGGAGCTGCTaGTGCATAGCCCATGGGAAAACCAGCTGGATAACCAATTCCTTT +
Preference number: 5 (lower is better)
Translates to: RIRSRIHVRRIGRSC*CIAHGKTSWITNSF
Trigger: AAAGGAATTGGTTATCCAGCTGGTTTTCCCATGGGCTATGCAGCAGCAGCTCCTGCCTATTCTCCTAACATGTATCCTGGAGCGAATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CAA 90 bp CTAGACCTCATTCATCACAGCCAGATGATGCCACCAGAAAGAGCAAGGTACTGTAGGAGTGTAACCTGTTaGGAAGGTAGGATTCGCTCC +
Preference number: 5 (lower is better)
Translates to: LDLIHHSQMMPPERARYCRSVTC*EGRIRS
Trigger: GGAGCGAATCCTACCTTCCAAACAGGTTACACTCCT...ACAGTACCTTGCTCTTTCTGGTGGCATCATCTGGCTGTGATGAATGAGGTCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CAA 90 bp GGTCACTGGCTCACACTAAATGCTCAGCCGCCAGCACAGATCCAAACAAGACCTTTGCATATGATGGTTTaGCATCAGTCACTGCAGGTA +
Preference number: 5 (lower is better)
Translates to: GHWLTLNAQPPAQIQTRPLHMMV*HQSLQV
Trigger: TACCTGCAGTGACTGATGCAAAACCATCATATGCAA...AGGTCTTGTTTGGATCTGTGCTGGCGGCTGAGCATTTAGTGTGAGCCAGTGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CAA 90 bp AGGACCACCCCCATTGCCTGTGAACACATTTGCATAGCACTCAAGAAGGTTTCCAGCAGAGAAACTGCTTaGCTGACACATAAACCACCC +
Preference number: 5 (lower is better)
Translates to: RTTPIACEHICIALKKVSSRETA*LTHKPP
Trigger: GGGTGGTTTATGTGTCAGCAAAGCAGTTTCTCTGCT...GGAAACCTTCTTGAGTGCTATGCAAATGTGTTCACAGGCAATGGGGGTGGTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CAA 90 bp AAATTCCTCTCCCACAATAAACCCTGCCAGCAAACGCACTCCAGCACTGCCTGGAACCTTTGCCCTTCTTaGTTGGGGAAAAACAGCAAT +
Preference number: 5 (lower is better)
Translates to: KFLSHNKPCQQTHSSTAWNLCPS*LGKNSN
Trigger: ATTGCTGTTTTTCCCCAACAAAGAAGGGCAAAGGTT...CCAGGCAGTGCTGGAGTGCGTTTGCTGGCAGGGTTTATTGTGGGAGAGGAATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CAA 90 bp TTGAGCCCCTGGAGCCCTCAGGACCTACTGATAAAGCATGTCCTCTGCAGTATACAGCCCTCACAGGAGTaGTACATGTATGTTTCCATT +
Preference number: 5 (lower is better)
Translates to: LSPWSPQDLLIKHVLCSIQPSQE*YMYVSI
Trigger: AATGGAAACATACATGTACAACTCCTGTGAGGGCTG...TATACTGCAGAGGACATGCTTTATCAGTAGGTCCTGAGGGCTCCAGGGGCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CAA 90 bp AAATTCCTCTCCCACAATAAACCCTGCCAGCAAACGCACTCCAGCACTGCCTGGTGGAAATTCCATTCCTaGGCATGGATACGTAAGTTC +
Preference number: 5 (lower is better)
Translates to: KFLSHNKPCQQTHSSTAWWKFHS*AWIRKF
Trigger: GAACTTACGTATCCATGCCAAGGAATGGAATTTCCA...CCAGGCAGTGCTGGAGTGCGTTTGCTGGCAGGGTTTATTGTGGGAGAGGAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CAA 90 bp TGGTCAGCTGAACCCCTGGAACCGTTAGAACCTACTAATCCTGCCAACCATCCAATTACCAACAGAGACTaGAAGAAAGGGGCACAAACT +
Preference number: 5 (lower is better)
Translates to: WSAEPLEPLEPTNPANHPITNRD*KKGAQT
Trigger: AGTTTGTGCCCCTTTCTTCAAGTCTCTGTTGGTAAT...TGGATGGTTGGCAGGATTAGTAGGTTCTAACGGTTCCAGGGGTTCAGCTGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CAA 90 bp AGGACCACCCCCATTGCCTGTGAACACATTTGCATAGCACTCAAGAAGGTTTCCATTACCAACAGAGACTaGAAGAAAGGGGCACAAACT +
Preference number: 5 (lower is better)
Translates to: RTTPIACEHICIALKKVSITNRD*KKGAQT
Trigger: AGTTTGTGCCCCTTTCTTCAAGTCTCTGTTGGTAAT...GGAAACCTTCTTGAGTGCTATGCAAATGTGTTCACAGGCAATGGGGGTGGTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CAA 90 bp ACTGATAAAGCATGTCCTCTGCAGTATACTCAAGAGTCTGCTGCCCTTCAGAAACAATTCCTTTGGCATTaGCATAGGGAACCCCAGAAG +
Preference number: 5 (lower is better)
Translates to: TDKACPLQYTQESAALQKQFLWH*HREPQK
Trigger: CTTCTGGGGTTCCCTATGCAAATGCCAAAGGAATTG...TTTCTGAAGGGCAGCAGACTCTTGAGTATACTGCAGAGGACATGCTTTATCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CAA 90 bp ACTGGCAACCCACATCAACCCCAAAAGGTTGAAGAATCATCTAAGATATTTCAGTCAGGACCACCCCCATaGCCTGTGAACACATTTGCA +
Preference number: 5 (lower is better)
Translates to: TGNPHQPQKVEESSKIFQSGPPP*PVNTFA
Trigger: TGCAAATGTGTTCACAGGCAATGGGGGTGGTCCTGA...CTGAAATATCTTAGATGATTCTTCAACCTTTTGGGGTTGATGTGGGTTGCCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CAA 90 bp ACTGGCAACCCACATCAACCCCAAAAGGTTGAAGAATCATCTAAGATATTTCAGTTCCTCTCGTTACTGTaGTGTCCCCCAAGACACATG +
Preference number: 5 (lower is better)
Translates to: TGNPHQPQKVEESSKIFQFLSLL*CPPRHM
Trigger: CATGTGTCTTGGGGGACACAACAGTAACGAGAGGAA...CTGAAATATCTTAGATGATTCTTCAACCTTTTGGGGTTGATGTGGGTTGCCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CAA 90 bp AGATGGAATTACCAACAGAGACTTGAAGAAAGGGGCACAAACTGTGTGCCTGCGTACGTTTCCATTCCTTaGGATTTTGCATATGATGGT +
Preference number: 5 (lower is better)
Translates to: RWNYQQRLEERGTNCVPAYVSIP*DFAYDG
Trigger: ACCATCATATGCAAAATCCAAAGGAATGGAAACGTA...CGCAGGCACACAGTTTGTGCCCCTTTCTTCAAGTCTCTGTTGGTAATTCCATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS-3UTR CAA 90 bp ACTGGCAACCCACATCAACCCCAAAAGGTTGAAGAATCATCTAAGATATTTCAGATACAGCTGAAACCTTaGCCCTTCTTTGTTGGGGAA +
Preference number: 5 (lower is better)
Translates to: TGNPHQPQKVEESSKIFQIQLKP*PFFVGE
Trigger: TTCCCCAACAAAGAAGGGCAAAGGTTTCAGCTGTAT...CTGAAATATCTTAGATGATTCTTCAACCTTTTGGGGTTGATGTGGGTTGCCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS TCA 72 bp TTCAAAAACGCGCCGCGGCGGCGACCTGGGCCTCAGTaGCCAGCGCACGCCGGCCCGCGGCGGGCTTGGCCG +
Preference number: 6 (lower is better)
Translates to: FKNAPRRRPGPQ*PAHAGPRRAWP
Trigger: CGGCCAAGCCCGCCGCGGGCCGGCGTGCGCTGGTCACTGAGGCCCAGGTCGCCGCCGCGGCGCGTTTTTGAA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389915.4
CDS TCA 72 bp GGGGGCGTGCCGAGGAGACCTGCTACGATAAGAGGCTaGCCCTCCGAGCCCCGCGTCTCCGCCGCCTCCCGG +
Preference number: 6 (lower is better)
Translates to: GGVPRRPATIRG*PSEPRVSAASR
Trigger: CCGGGAGGCGGCGGAGACGCGGGGCTCGGAGGGTCAGCCTCTTATCGTAGCAGGTCTCCTCGGCACGCCCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389915.4
CDS CCA 72 bp CCACTGAGGGGGCACATAGCTGTAAGTGGGCGTTCCTaGGGCCCGGTACGTGGGCACAGTGACCGGGTGGGG +
Preference number: 6 (lower is better)
Translates to: PLRGHIAVSGRS*GPVRGHSDRVG
Trigger: CCCCACCCGGTCACTGTGCCCACGTACCGGGCCCCAGGAACGCCCACTTACAGCTATGTGCCCCCTCAGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS TCA 72 bp GAACCCCAGAAGATCCAGGACTATAAACAGGATTCATaGTTTCAAAAACGCGCCGCGGCGGCGACCTGGGCC +
Preference number: 6 (lower is better)
Translates to: EPQKIQDYKQDS*FQKRAAAATWA
Trigger: GGCCCAGGTCGCCGCCGCGGCGCGTTTTTGAAATCATGAATCCTGTTTATAGTCCTGGATCTTCTGGGGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389915.4
CDS GCA 72 bp AGGATACATGTTAGGAGAATAGGCAGGAGCTGCTGCTaGATAGCCCATGGGAAAACCAGCTGGATAACCAAT +
Preference number: 6 (lower is better)
Translates to: RIHVRRIGRSCC*IAHGKTSWITN
Trigger: ATTGGTTATCCAGCTGGTTTTCCCATGGGCTATGCAGCAGCAGCTCCTGCCTATTCTCCTAACATGTATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS CAA 90 bp CATAGCCCATGGGAAAACCAGCTGGATAACCAATTCCTTTGGCATTaGCATAGGGAACCCCAGAAGATCCAGGACTATAAACAGGATTCA +
Preference number: 6 (lower is better)
Translates to: HSPWENQLDNQFLWH*HREPQKIQDYKQDS
Trigger: TGAATCCTGTTTATAGTCCTGGATCTTCTGGGGTTCCCTATGCAAATGCCAAAGGAATTGGTTATCCAGCTGGTTTTCCCATGGGCTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5
CDS CAA 72 bp TGGGAAAACCAGCTGGATAACCAATTCCTTTGGCATTaGCATAGGGAACCCCAGAAGATCCAGGACTATAAA +
Preference number: 6 (lower is better)
Translates to: WENQLDNQFLWH*HREPQKIQDYK
Trigger: TTTATAGTCCTGGATCTTCTGGGGTTCCCTATGCAAATGCCAAAGGAATTGGTTATCCAGCTGGTTTTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389915.4
ENST00000409185.5