RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM168A (Homo sapiens)

Ensembl gene IDs: ENSG00000054965

Ensembl transcript IDs: ENST00000064778.8, ENST00000356467.5, ENST00000432223.2, ENST00000450446.6, ENST00000632101.1

Found 883 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCAAGCGCTGGGTGCCGGAGGCTGCTGCTGGGCAATCCAGGCTCCTaGCTGAGACTAGCAGGGACCTCCTCGTCCCAGGGGTCCCTCTTC +
Preference number: 1 (lower is better)
Translates to: PSAGCRRLLLGNPGS*LRLAGTSSSQGSLF
Trigger: GAAGAGGGACCCCTGGGACGAGGAGGTCCCTGCTAGTCTCAGCCAGGAGCCTGGATTGCCCAGCAGCAGCCTCCGGCACCCAGCGCTTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR GCA 90 bp TTTCTTCAGCTCTGCGGGTGGGTCCCAACTGGCCCACTCTACTACTaGCCCTCTCTGGATTCCCAAGCTTGGCAAGCAGCGGGGGCCGCA +
Preference number: 1 (lower is better)
Translates to: FLQLCGWVPTGPLYY*PSLDSQAWQAAGAA
Trigger: TGCGGCCCCCGCTGCTTGCCAAGCTTGGGAATCCAGAGAGGGGCAGTAGTAGAGTGGGCCAGTTGGGACCCACCCGCAGAGCTGAAGAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CCA 90 bp GCCTGTGCGCTCAGAGGCTCCGGTGTGGAATCCCATCAGTTAGTCTaGCGTGTTTCTTCAGCTCTGCGGGTGGGTCCCAACTGGCCCACT +
Preference number: 1 (lower is better)
Translates to: ACALRGSGVESHQLV*RVSSALRVGPNWPT
Trigger: AGTGGGCCAGTTGGGACCCACCCGCAGAGCTGAAGAAACACGCCAGACTAACTGATGGGATTCCACACCGGAGCCTCTGAGCGCACAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR GCA 90 bp GGCAGTGGCATGAGGAGGAGAGAGGGGTTTGCATCCTGGGGCCAGTaGTGTAGCTCACTGTCAGGCGGCTACATCCCTTGTCCTCTCTTG +
Preference number: 1 (lower is better)
Translates to: GSGMRRREGFASWGQ*CSSLSGGYIPCPLL
Trigger: CAAGAGAGGACAAGGGATGTAGCCGCCTGACAGTGAGCTACAGCACTGGCCCCAGGATGCAAACCCCTCTCTCCTCCTCATGCCACTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CCA 90 bp TTGGGGAGAGGCAGTGGCATGAGGAGGAGAGAGGGGTTTGCATCCTaGGGCCAGTGCTGTAGCTCACTGTCAGGCGGCTACATCCCTTGT +
Preference number: 1 (lower is better)
Translates to: LGRGSGMRRREGFAS*GQCCSSLSGGYIPC
Trigger: ACAAGGGATGTAGCCGCCTGACAGTGAGCTACAGCACTGGCCCCAGGATGCAAACCCCTCTCTCCTCCTCATGCCACTGCCTCTCCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR GCA 90 bp GCATCCGGCCTTCCAAGGCCTCGGGATGCTGGGATCCTACCACCCTaGAGCCGCTTGGCAGGTCTAAGGACAAAATCACCTTTTGAGGAA +
Preference number: 1 (lower is better)
Translates to: ASGLPRPRDAGILPP*SRLAGLRTKSPFEE
Trigger: TTCCTCAAAAGGTGATTTTGTCCTTAGACCTGCCAAGCGGCTGCAGGGTGGTAGGATCCCAGCATCCCGAGGCCTTGGAAGGCCGGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR GCA 90 bp GGGCAGATAAGTAAAGGACAAACCCTGCAGCCCCCTTGGCATGCCTaGCTGTGCGCTCAGAGGCTCCGGTGTGGAATCCCATCAGTTAGT +
Preference number: 1 (lower is better)
Translates to: GQISKGQTLQPPWHA*LCAQRLRCGIPSVS
Trigger: ACTAACTGATGGGATTCCACACCGGAGCCTCTGAGCGCACAGGCAGGCATGCCAAGGGGGCTGCAGGGTTTGTCCTTTACTTATCTGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CCA 90 bp TCCTCTTCTTCCTTTCTCCTCTCTGTGGTTCCACCCCAGCCCACATaGAGGCAGCAGGGTTCTGGGAAGCCTAGCGGATACCAGCATGCT +
Preference number: 1 (lower is better)
Translates to: SSSSFLLSVVPPQPT*RQQGSGKPSGYQHA
Trigger: AGCATGCTGGTATCCGCTAGGCTTCCCAGAACCCTGCTGCCTCCATGTGGGCTGGGGTGGAACCACAGAGAGGAGAAAGGAAGAAGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CCA 90 bp CAGTTAGTCTGGCGTGTTTCTTCAGCTCTGCGGGTGGGTCCCAACTaGCCCACTCTACTACTGCCCCTCTCTGGATTCCCAAGCTTGGCA +
Preference number: 1 (lower is better)
Translates to: QLVWRVSSALRVGPN*PTLLLPLSGFPSLA
Trigger: TGCCAAGCTTGGGAATCCAGAGAGGGGCAGTAGTAGAGTGGGCCAGTTGGGACCCACCCGCAGAGCTGAAGAAACACGCCAGACTAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CCA 90 bp AGTCTCCTCTCTTTCCCTGACTCTCTTAGGCCTGAGGAGAAAGGCTaGGGTCTGGAGATGCTGGTCTTGCTGGGGTCAGGCCCAAAGCTG +
Preference number: 1 (lower is better)
Translates to: SLLSFPDSLRPEEKG*GLEMLVLLGSGPKL
Trigger: CAGCTTTGGGCCTGACCCCAGCAAGACCAGCATCTCCAGACCCCAGCCTTTCTCCTCAGGCCTAAGAGAGTCAGGGAAAGAGAGGAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR TCA 90 bp GAGCTGCCAGCACCCACCTGGAATGTGGTTCCTTCACTTGGGCCATaGATGGCACAGGTAACCAAGAGCTTGGCCTGCCTGCAAGCTCTA +
Preference number: 1 (lower is better)
Translates to: ELPAPTWNVVPSLGP*MAQVTKSLACLQAL
Trigger: TAGAGCTTGCAGGCAGGCCAAGCTCTTGGTTACCTGTGCCATTCATGGCCCAAGTGAAGGAACCACATTCCAGGTGGGTGCTGGCAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR TCA 90 bp CTCTGTGACCTTACCAGTAACTGTGCCCATCCTACCAGAGGCACATaGCTGTCCCCGCTCTCCTGGGCTCAGTCCTTTTGCAGTGACTCC +
Preference number: 1 (lower is better)
Translates to: LCDLTSNCAHPTRGT*LSPLSWAQSFCSDS
Trigger: GGAGTCACTGCAAAAGGACTGAGCCCAGGAGAGCGGGGACAGTCATGTGCCTCTGGTAGGATGGGCACAGTTACTGGTAAGGTCACAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR TCA 90 bp TTGGACTCAACAGCATGCACCACAGAAGATATCCACTGGAGAGACTaGGGGACTGGGACCCAAGTCTGGCTTAGGCAGGGCTGGCCATGG +
Preference number: 1 (lower is better)
Translates to: LDSTACTTEDIHWRD*GTGTQVWLRQGWPW
Trigger: CCATGGCCAGCCCTGCCTAAGCCAGACTTGGGTCCCAGTCCCTCAGTCTCTCCAGTGGATATCTTCTGTGGTGCATGCTGTTGAGTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CCA 90 bp TGCCCTAGGTTCCCACTCCAATCAGGAGGAAGCTCCTCATCAGAGTaGGTCCATGACAGCTCAGAGGCTGAAGTCTGGATGACACAGGGC +
Preference number: 1 (lower is better)
Translates to: CPRFPLQSGGSSSSE*VHDSSEAEVWMTQG
Trigger: GCCCTGTGTCATCCAGACTTCAGCCTCTGAGCTGTCATGGACCCACTCTGATGAGGAGCTTCCTCCTGATTGGAGTGGGAACCTAGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CCA 90 bp ACCTTCAGAGCTGCCAGCACCCACCTGGAATGTGGTTCCTTCACTTaGGCCATGAATGGCACAGGTAACCAAGAGCTTGGCCTGCCTGCA +
Preference number: 1 (lower is better)
Translates to: TFRAASTHLECGSFT*AMNGTGNQELGLPA
Trigger: TGCAGGCAGGCCAAGCTCTTGGTTACCTGTGCCATTCATGGCCCAAGTGAAGGAACCACATTCCAGGTGGGTGCTGGCAGCTCTGAAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CCA 90 bp CCATGTAGCCTCTGCCCAGTCTTCAACCCCCGCCTTTGGAGTCCGTaGAGGAAAAGAGCAGAAACAGGAGCCCAGAGACCATTCCAGACT +
Preference number: 1 (lower is better)
Translates to: PCSLCPVFNPRLWSP*RKRAETGAQRPFQT
Trigger: AGTCTGGAATGGTCTCTGGGCTCCTGTTTCTGCTCTTTTCCTCCACGGACTCCAAAGGCGGGGGTTGAAGACTGGGCAGAGGCTACATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CCA 90 bp CCAGATCTCTGGGAACGGGGTACCTCAAACTTGGAACAATTCGGGTaGCCAGGGGTAAGGATGCTCAGAGTCTGGTTCTGGTCCTCACCC +
Preference number: 1 (lower is better)
Translates to: PDLWERGTSNLEQFG*PGVRMLRVWFWSSP
Trigger: GGGTGAGGACCAGAACCAGACTCTGAGCATCCTTACCCCTGGCCACCCGAATTGTTCCAAGTTTGAGGTACCCCGTTCCCAGAGATCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR TCA 90 bp GCTGGGGTCTGGAGATGCTGGTCTTGCTGGGGTCAGGCCCAAAGCTaGTCTCACCCATTTGATTCCTATGGGCCGGTACTTTGCAAAGCT +
Preference number: 1 (lower is better)
Translates to: AGVWRCWSCWGQAQS*SHPFDSYGPVLCKA
Trigger: AGCTTTGCAAAGTACCGGCCCATAGGAATCAAATGGGTGAGATCAGCTTTGGGCCTGACCCCAGCAAGACCAGCATCTCCAGACCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR GCA 90 bp GGATCTGGACAGTGGGCAGGCTCTCAGGGATTAGGAAGCCAGGTGTaGAGGCTTACCAAGGACATGGGTCTCCCAATAGAAAGATGCCTC +
Preference number: 1 (lower is better)
Translates to: GSGQWAGSQGLGSQV*RLTKDMGLPIERCL
Trigger: GAGGCATCTTTCTATTGGGAGACCCATGTCCTTGGTAAGCCTGCACACCTGGCTTCCTAATCCCTGAGAGCCTGCCCACTGTCCAGATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CCA 90 bp GTTAGATGTGCCTCTGGGTCCCTCCCCAGGGCTCATTACAGGTCCTaGCCCAAAGCAGTTCATACAAATCTGCTCAGCTCAGAGACTGGG +
Preference number: 1 (lower is better)
Translates to: VRCASGSLPRAHYRS*PKAVHTNLLSSETG
Trigger: CCCAGTCTCTGAGCTGAGCAGATTTGTATGAACTGCTTTGGGCCAGGACCTGTAATGAGCCCTGGGGAGGGACCCAGAGGCACATCTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CCA 90 bp GCCCAGGGACTTCAGTCTGTACGTTTTGTACCAACTCACTGGATCTaGACAGTGGGCAGGCTCTCAGGGATTAGGAAGCCAGGTGTGCAG +
Preference number: 1 (lower is better)
Translates to: AQGLQSVRFVPTHWI*TVGRLSGIRKPGVQ
Trigger: CTGCACACCTGGCTTCCTAATCCCTGAGAGCCTGCCCACTGTCCAGATCCAGTGAGTTGGTACAAAACGTACAGACTGAAGTCCCTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CCA 90 bp GAACAATTCGGGTGGCCAGGGGTAAGGATGCTCAGAGTCTGGTTCTaGTCCTCACCCATGGGAAAAGCAAGCCCAGGGACTTCAGTCTGT +
Preference number: 1 (lower is better)
Translates to: EQFGWPGVRMLRVWF*SSPMGKASPGTSVC
Trigger: ACAGACTGAAGTCCCTGGGCTTGCTTTTCCCATGGGTGAGGACCAGAACCAGACTCTGAGCATCCTTACCCCTGGCCACCCGAATTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CCA 90 bp AGAACAAATTTAGCATCAACTTGGGGAGACGCCCAAGGGACTCACTaGCCCAGGACAGTCCTCTGTGCCTCCCTCCCCAAGAACCACTCA +
Preference number: 1 (lower is better)
Translates to: RTNLASTWGDAQGTH*PRTVLCASLPKNHS
Trigger: TGAGTGGTTCTTGGGGAGGGAGGCACAGAGGACTGTCCTGGGCCAGTGAGTCCCTTGGGCGTCTCCCCAAGTTGATGCTAAATTTGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR TCA 90 bp TCAGGCGGCTACATCCCTTGTCCTCTCTTGCTTGCCTGCCTTCAATaGGACGGCCCTTCCAGCTCTGACTTTTTGTCTAGCTTGACCACC +
Preference number: 1 (lower is better)
Translates to: SGGYIPCPLLLACLQ*DGPSSSDFLSSLTT
Trigger: GGTGGTCAAGCTAGACAAAAAGTCAGAGCTGGAAGGGCCGTCTCATTGAAGGCAGGCAAGCAAGAGAGGACAAGGGATGTAGCCGCCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR TCA 90 bp CCCTCTGGGCACAGAACAAAGCTGAGGAATTTGATATGGAAGCTCTaGGCCTCGCTTAGTCAGTGCCTCGCTGGGAACCTGGATGAGTCC +
Preference number: 1 (lower is better)
Translates to: PSGHRTKLRNLIWKL*ASLSQCLAGNLDES
Trigger: GGACTCATCCAGGTTCCCAGCGAGGCACTGACTAAGCGAGGCTCAGAGCTTCCATATCAAATTCCTCAGCTTTGTTCTGTGCCCAGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR TCA 90 bp GGTAAGGAGGAGCTTGAGTCACACCATAGATCCAGACTATCTGGCTaGCCCGAGGAGAAGGTCTCTGGGACAGTCTCCTCTCTTTCCCTG +
Preference number: 1 (lower is better)
Translates to: GKEELESHHRSRLSG*PEEKVSGTVSSLSL
Trigger: CAGGGAAAGAGAGGAGACTGTCCCAGAGACCTTCTCCTCGGGTCAGCCAGATAGTCTGGATCTATGGTGTGACTCAAGCTCCTCCTTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR GCA 90 bp TTTTGTCCCTTTCTAGCTTTGTGGCAGCCAGTCCCAACTCCTGTGTaGCTCGGTTGGCCTTTGGGTTGGACTCAACAGCATGCACCACAG +
Preference number: 1 (lower is better)
Translates to: FCPFLALWQPVPTPV*LGWPLGWTQQHAPQ
Trigger: CTGTGGTGCATGCTGTTGAGTCCAACCCAAAGGCCAACCGAGGCACACAGGAGTTGGGACTGGCTGCCACAAAGCTAGAAAGGGACAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CCA 90 bp TGGCCTCTCCTTTTCGGCCAGTCCACCTGCTCCTTCTCCTGGAGGTaGAGTCAGGTACAGGACGGAAGTTCCAGATGTCTTCACAGAATT +
Preference number: 1 (lower is better)
Translates to: WPLLFGQSTCSFSWR*SQVQDGSSRCLHRI
Trigger: AATTCTGTGAAGACATCTGGAACTTCCGTCCTGTACCTGACTCCACCTCCAGGAGAAGGAGCAGGTGGACTGGCCGAAAAGGAGAGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CCA 90 bp AACTTGGAACAATTCGGGTGGCCAGGGGTAAGGATGCTCAGAGTCTaGTTCTGGTCCTCACCCATGGGAAAAGCAAGCCCAGGGACTTCA +
Preference number: 1 (lower is better)
Translates to: NLEQFGWPGVRMLRV*FWSSPMGKASPGTS
Trigger: TGAAGTCCCTGGGCTTGCTTTTCCCATGGGTGAGGACCAGAACCAGACTCTGAGCATCCTTACCCCTGGCCACCCGAATTGTTCCAAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR GCA 90 bp CAGGTGTGCAGGCTTACCAAGGACATGGGTCTCCCAATAGAAAGATaGCTCGTGCTGTCCTTGAACATGTCTTCGGTCCTGGGCATTGTG +
Preference number: 1 (lower is better)
Translates to: QVCRLTKDMGLPIER*LVLSLNMSSVLGIV
Trigger: CACAATGCCCAGGACCGAAGACATGTTCAAGGACAGCACGAGGCATCTTTCTATTGGGAGACCCATGTCCTTGGTAAGCCTGCACACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CCA 90 bp GACTTCAGTCTGTACGTTTTGTACCAACTCACTGGATCTGGACAGTaGGCAGGCTCTCAGGGATTAGGAAGCCAGGTGTGCAGGCTTACC +
Preference number: 1 (lower is better)
Translates to: DFSLYVLYQLTGSGQ*AGSQGLGSQVCRLT
Trigger: GGTAAGCCTGCACACCTGGCTTCCTAATCCCTGAGAGCCTGCCCACTGTCCAGATCCAGTGAGTTGGTACAAAACGTACAGACTGAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CCA 90 bp AAGCAAGCCCAGGGACTTCAGTCTGTACGTTTTGTACCAACTCACTaGATCTGGACAGTGGGCAGGCTCTCAGGGATTAGGAAGCCAGGT +
Preference number: 1 (lower is better)
Translates to: KQAQGLQSVRFVPTH*IWTVGRLSGIRKPG
Trigger: ACCTGGCTTCCTAATCCCTGAGAGCCTGCCCACTGTCCAGATCCAGTGAGTTGGTACAAAACGTACAGACTGAAGTCCCTGGGCTTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR TCA 90 bp GCTTTCACTATTTGCAGGCAATCCAGCTCCCAGACTCAAACTTCTTaGCCCCAGGCCAGTGAGGAGAGGGGGTCAGGTAGAAGTAGAAGA +
Preference number: 1 (lower is better)
Translates to: AFTICRQSSSQTQTS*PQASEERGSGRSRR
Trigger: TCTTCTACTTCTACCTGACCCCCTCTCCTCACTGGCCTGGGGTCAAGAAGTTTGAGTCTGGGAGCTGGATTGCCTGCAAATAGTGAAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CCA 90 bp GTCCTGGCCCAAAGCAGTTCATACAAATCTGCTCAGCTCAGAGACTaGGCTTCCCAGCTCTATAAAGTACAGTTAGCCCCTCCCTCCATG +
Preference number: 1 (lower is better)
Translates to: VLAQSSSYKSAQLRD*ASQLYKVQLAPPSM
Trigger: CATGGAGGGAGGGGCTAACTGTACTTTATAGAGCTGGGAAGCCCAGTCTCTGAGCTGAGCAGATTTGTATGAACTGCTTTGGGCCAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CCA 90 bp TATGGAAGCTCTGAGCCTCGCTTAGTCAGTGCCTCGCTGGGAACCTaGATGAGTCCTATCTGTATGAGGAGCCAAAACTTGGTGACCAAG +
Preference number: 1 (lower is better)
Translates to: YGSSEPRLVSASLGT*MSPICMRSQNLVTK
Trigger: CTTGGTCACCAAGTTTTGGCTCCTCATACAGATAGGACTCATCCAGGTTCCCAGCGAGGCACTGACTAAGCGAGGCTCAGAGCTTCCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR TCA 90 bp ACCACCCTGCAGCCGCTTGGCAGGTCTAAGGACAAAATCACCTTTTaGGGAAGTGCCAGGTCAGTTAACATCACTGTGCAAATCAGAAGG +
Preference number: 1 (lower is better)
Translates to: TTLQPLGRSKDKITF*GSARSVNITVQIRR
Trigger: CCTTCTGATTTGCACAGTGATGTTAACTGACCTGGCACTTCCTCAAAAGGTGATTTTGTCCTTAGACCTGCCAAGCGGCTGCAGGGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR TCA 90 bp ATGCTGGTCTTGCTGGGGTCAGGCCCAAAGCTGATCTCACCCATTTaGTTCCTATGGGCCGGTACTTTGCAAAGCTGTTACATCTGTTCT +
Preference number: 1 (lower is better)
Translates to: MLVLLGSGPKLISPI*FLWAGTLQSCYICS
Trigger: AGAACAGATGTAACAGCTTTGCAAAGTACCGGCCCATAGGAATCAAATGGGTGAGATCAGCTTTGGGCCTGACCCCAGCAAGACCAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR TCA 90 bp ATAACTCTAACCCTGTCCCTCTCAGGGCGAGTACATGAAAGGCCGTaGAGTGCTTTGACCTCTGTGATGCACCTGACAAATCCAAAGGTT +
Preference number: 1 (lower is better)
Translates to: ITLTLSLSGRVHERP*SALTSVMHLTNPKV
Trigger: AACCTTTGGATTTGTCAGGTGCATCACAGAGGTCAAAGCACTTCACGGCCTTTCATGTACTCGCCCTGAGAGGGACAGGGTTAGAGTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR TCA 90 bp GCCTTCAATGAGACGGCCCTTCCAGCTCTGACTTTTTGTCTAGCTTaGCCACCGTGCCATCTAGAATCTTTGGAGGTATCTACCTATGGT +
Preference number: 1 (lower is better)
Translates to: AFNETALPALTFCLA*PPCHLESLEVSTYG
Trigger: ACCATAGGTAGATACCTCCAAAGATTCTAGATGGCACGGTGGTCAAGCTAGACAAAAAGTCAGAGCTGGAAGGGCCGTCTCATTGAAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CCA 90 bp AGCTTGACCACCGTGCCATCTAGAATCTTTGGAGGTATCTACCTATaGTACCTCCCACTAGATCTCTGTGACCTTACCAGTAACTGTGCC +
Preference number: 1 (lower is better)
Translates to: SLTTVPSRIFGGIYL*YLPLDLCDLTSNCA
Trigger: GGCACAGTTACTGGTAAGGTCACAGAGATCTAGTGGGAGGTACCATAGGTAGATACCTCCAAAGATTCTAGATGGCACGGTGGTCAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR TCA 90 bp AGGGATGTTACATGCCATGAGAACAGGTTTCTCTGTCATGTGATATaGAACAGGGAAGCAGATGCCTTTAAGTCAGGATGGGGACAGGCC +
Preference number: 1 (lower is better)
Translates to: RDVTCHENRFLCHVI*NREADAFKSGWGQA
Trigger: GGCCTGTCCCCATCCTGACTTAAAGGCATCTGCTTCCCTGTTTCATATCACATGACAGAGAAACCTGTTCTCATGGCATGTAACATCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR GCA 90 bp ACAAAATCACCTTTTGAGGAAGTGCCAGGTCAGTTAACATCACTGTaGAAATCAGAAGGTCCAGGGCCAGATGCTTTGGCCAGAGACCTT +
Preference number: 1 (lower is better)
Translates to: TKSPFEEVPGQLTSL*KSEGPGPDALARDL
Trigger: AAGGTCTCTGGCCAAAGCATCTGGCCCTGGACCTTCTGATTTGCACAGTGATGTTAACTGACCTGGCACTTCCTCAAAAGGTGATTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR GCA 90 bp TGTTTATTGCTATTGCTTTTCCTTCACTATCCTCACCTTCAGAGCTaGCAGCACCCACCTGGAATGTGGTTCCTTCACTTGGGCCATGAA +
Preference number: 1 (lower is better)
Translates to: CLLLLLFLHYPHLQS*QHPPGMWFLHLGHE
Trigger: TTCATGGCCCAAGTGAAGGAACCACATTCCAGGTGGGTGCTGGCAGCTCTGAAGGTGAGGATAGTGAAGGAAAAGCAATAGCAATAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR TCA 90 bp GGACCACATCTGTTTATGCTCTTCAAATGGAATCCAGCCTTCAGATaGACCACTGCAATAAACCCTACTCTCTGCTTGCCTCTAGACTGG +
Preference number: 1 (lower is better)
Translates to: GPHLFMLFKWNPAFR*TTAINPTLCLPLDW
Trigger: CCAGTCTAGAGGCAAGCAGAGAGTAGGGTTTATTGCAGTGGTTCATCTGAAGGCTGGATTCCATTTGAAGAGCATAAACAGATGTGGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
3UTR TCA 90 bp TTCACAGGGATGTTACATGCCATGAGAACAGGTTTCTCTGTCATGTaGTATGAAACAGGGAAGCAGATGCCTTTAAGTCAGGATGGGGAC +
Preference number: 1 (lower is better)
Translates to: FTGMLHAMRTGFSVM*YETGKQMPLSQDGD
Trigger: GTCCCCATCCTGACTTAAAGGCATCTGCTTCCCTGTTTCATATCACATGACAGAGAAACCTGTTCTCATGGCATGTAACATCCCTGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CCA 90 bp TGGAATGTTGAAGCTGGCCTGCCAGGAATTTTGAAGGCTGGGTCCTaGAACCATATAATGCCTAATTTCAGAAACGAGGAGTTTTCTAGG +
Preference number: 1 (lower is better)
Translates to: WNVEAGLPGILKAGS*NHIMPNFRNEEFSR
Trigger: CCTAGAAAACTCCTCGTTTCTGAAATTAGGCATTATATGGTTCCAGGACCCAGCCTTCAAAATTCCTGGCAGGCCAGCTTCAACATTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CCA 90 bp AACACGCCTACATACTCAGGTGGTTTTGTTCTTGGTCTGTTGCAATaGTTCTCAGGAGACATTTCATTTGTGTCTGGGACATGGGAATGT +
Preference number: 1 (lower is better)
Translates to: NTPTYSGGFVLGLLQ*FSGDISFVSGTWEC
Trigger: ACATTCCCATGTCCCAGACACAAATGAAATGTCTCCTGAGAACCATTGCAACAGACCAAGAACAAAACCACCTGAGTATGTAGGCGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
3UTR GCA 90 bp TCATCTATAAAATGGAGGACTTTGGCAACCAATGTCAAAGTACTTTaGATACCAAAAACGCTCTGGACAGGTGTGTGTGTCTCTGCTAAA +
Preference number: 1 (lower is better)
Translates to: SSIKWRTLATNVKVL*IPKTLWTGVCVSAK
Trigger: TTTAGCAGAGACACACACACCTGTCCAGAGCGTTTTTGGTATGCAAAGTACTTTGACATTGGTTGCCAAAGTCCTCCATTTTATAGATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CCA 90 bp ACTTTGGCAACCAATGTCAAAGTACTTTGCATACCAAAAACGCTCTaGACAGGTGTGTGTGTCTCTGCTAAATATTCAGGAAAGAGGATA +
Preference number: 1 (lower is better)
Translates to: TLATNVKVLCIPKTL*TGVCVSAKYSGKRI
Trigger: TATCCTCTTTCCTGAATATTTAGCAGAGACACACACACCTGTCCAGAGCGTTTTTGGTATGCAAAGTACTTTGACATTGGTTGCCAAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR TCA 90 bp CAGGATGGAAAAGCAGACTTCCACGTATTTTCACTTAACTGCAATTaGGGAGGAATTCTGATACAGATGGTGATATATAAGACAAAGTTC +
Preference number: 1 (lower is better)
Translates to: QDGKADFHVFSLNCN*GGILIQMVIYKTKF
Trigger: GAACTTTGTCTTATATATCACCATCTGTATCAGAATTCCTCCTCAATTGCAGTTAAGTGAAAATACGTGGAAGTCTGCTTTTCCATCCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR GCA 90 bp CAGGGCTGGCCATGGAATGTTGAAGCTGGCCTGCCAGGAATTTTGAAGGCTGGGCAGCCAAGCGCTGGGTaGCGGAGGCTGCTGCTGGGC +
Preference number: 2 (lower is better)
Translates to: QGWPWNVEAGLPGILKAGQPSAG*RRLLLG
Trigger: GCCCAGCAGCAGCCTCCGGCACCCAGCGCTTGGCTG...CCCAGCCTTCAAAATTCCTGGCAGGCCAGCTTCAACATTCCATGGCCAGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CAA 90 bp CCCAACTGGCCCACTCTACTACTGCCCCTCTCTGGATTCCCAAGCTaGGCAAGCAGCGGGGGCCGCACAGCCAGTAGTGATGTGGGAGAA +
Preference number: 2 (lower is better)
Translates to: PNWPTLLLPLSGFPS*ASSGGRTASSDVGE
Trigger: TTCTCCCACATCACTACTGGCTGTGCGGCCCCCGCTGCTTGCCAAGCTTGGGAATCCAGAGAGGGGCAGTAGTAGAGTGGGCCAGTTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR GCA 90 bp CAGGGCTGGCCATGGAATGTTGAAGCTGGCCTGCCAGGAATTTTGAAGGCTGGGGGTGCCGGAGGCTGCTaGTGGGCAATCCAGGCTCCT +
Preference number: 2 (lower is better)
Translates to: QGWPWNVEAGLPGILKAGGAGGC*WAIQAP
Trigger: AGGAGCCTGGATTGCCCAGCAGCAGCCTCCGGCACC...CCCAGCCTTCAAAATTCCTGGCAGGCCAGCTTCAACATTCCATGGCCAGCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR GCA 90 bp GTGTTTCTTCAGCTCTGCGGGTGGGTCCCAACTGGCCCACTCTACTACTGCCCCGCATCCTGGGGCCAGTaGTGTAGCTCACTGTCAGGC +
Preference number: 2 (lower is better)
Translates to: VFLQLCGWVPTGPLYYCPASWGQ*CSSLSG
Trigger: GCCTGACAGTGAGCTACAGCACTGGCCCCAGGATGC...GGGGCAGTAGTAGAGTGGGCCAGTTGGGACCCACCCGCAGAGCTGAAGAAACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR GCA 90 bp CTTGCTGGGGTCAGGCCCAAAGCTGATCTCACCCATTTGATTCCTATGGGCCGGCCCCCTTGGCATGCCTaGCTGTGCGCTCAGAGGCTC +
Preference number: 2 (lower is better)
Translates to: LAGVRPKADLTHLIPMGRPPWHA*LCAQRL
Trigger: GAGCCTCTGAGCGCACAGGCAGGCATGCCAAGGGGG...CCGGCCCATAGGAATCAAATGGGTGAGATCAGCTTTGGGCCTGACCCCAGCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR TCA 90 bp GTGTTTCTTCAGCTCTGCGGGTGGGTCCCAACTGGCCCACTCTACTACTGCCCCGCCTCGTGCTGTCCTTaGACATGTCTTCGGTCCTGG +
Preference number: 2 (lower is better)
Translates to: VFLQLCGWVPTGPLYYCPASCCP*TCLRSW
Trigger: CCAGGACCGAAGACATGTTCAAGGACAGCACGAGGC...GGGGCAGTAGTAGAGTGGGCCAGTTGGGACCCACCCGCAGAGCTGAAGAAACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR TCA 90 bp GTGTTTCTTCAGCTCTGCGGGTGGGTCCCAACTGGCCCACTCTACTACTGCCCCCCTCTCCTCTCGGGATaGGGGGCTACTGTCCTAAAA +
Preference number: 2 (lower is better)
Translates to: VFLQLCGWVPTGPLYYCPPLLSG*GATVLK
Trigger: TTTTAGGACAGTAGCCCCTCATCCCGAGAGGAGAGG...GGGGCAGTAGTAGAGTGGGCCAGTTGGGACCCACCCGCAGAGCTGAAGAAACAC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR TCA 90 bp CTTGCTGGGGTCAGGCCCAAAGCTGATCTCACCCATTTGATTCCTATGGGCCGGCTAGGCCAAGGAGGCTaGTGGGCTTTACCCTCCTGG +
Preference number: 2 (lower is better)
Translates to: LAGVRPKADLTHLIPMGRLGQGG*WALPSW
Trigger: CCAGGAGGGTAAAGCCCATCAGCCTCCTTGGCCTAG...CCGGCCCATAGGAATCAAATGGGTGAGATCAGCTTTGGGCCTGACCCCAGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR GCA 90 bp CAGGGCTGGCCATGGAATGTTGAAGCTGGCCTGCCAGGAATTTTGAAGGCTGGGGCATCCTGGGGCCAGTaGTGTAGCTCACTGTCAGGC +
Preference number: 2 (lower is better)
Translates to: QGWPWNVEAGLPGILKAGASWGQ*CSSLSG
Trigger: GCCTGACAGTGAGCTACAGCACTGGCCCCAGGATGC...CCCAGCCTTCAAAATTCCTGGCAGGCCAGCTTCAACATTCCATGGCCAGCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CCA 90 bp CCAAGAGCTTGGCCTGCCTGCAAGCTCTATGGTCAGACAGGTGAGTCCTGGCACTGCTTGCCTCTAGACTaGGATCCCCAGGGACAGGAC +
Preference number: 2 (lower is better)
Translates to: PRAWPACKLYGQTGESWHCLPLD*DPQGQD
Trigger: GTCCTGTCCCTGGGGATCCCAGTCTAGAGGCAAGCA...GTGCCAGGACTCACCTGTCTGACCATAGAGCTTGCAGGCAGGCCAAGCTCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CCA 90 bp GTGTTTCTTCAGCTCTGCGGGTGGGTCCCAACTGGCCCACTCTACTACTGCCCCACCTGCTCCTTCTCCTaGAGGTGGAGTCAGGTACAG +
Preference number: 2 (lower is better)
Translates to: VFLQLCGWVPTGPLYYCPTCSFS*RWSQVQ
Trigger: CTGTACCTGACTCCACCTCCAGGAGAAGGAGCAGGT...GGGGCAGTAGTAGAGTGGGCCAGTTGGGACCCACCCGCAGAGCTGAAGAAACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CCA 90 bp GTGTTTCTTCAGCTCTGCGGGTGGGTCCCAACTGGCCCACTCTACTACTGCCCCTCTGGTCCTCACCCATaGGAAAAGCAAGCCCAGGGA +
Preference number: 2 (lower is better)
Translates to: VFLQLCGWVPTGPLYYCPSGPHP*EKQAQG
Trigger: TCCCTGGGCTTGCTTTTCCCATGGGTGAGGACCAGA...GGGGCAGTAGTAGAGTGGGCCAGTTGGGACCCACCCGCAGAGCTGAAGAAACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR TCA 90 bp GTGTTTCTTCAGCTCTGCGGGTGGGTCCCAACTGGCCCACTCTACTACTGCCCCAGATGCTTCAGTACGTaGGCCTGTGTGGGGATCAGA +
Preference number: 2 (lower is better)
Translates to: VFLQLCGWVPTGPLYYCPRCFST*ACVGIR
Trigger: TCTGATCCCCACACAGGCTCACGTACTGAAGCATCT...GGGGCAGTAGTAGAGTGGGCCAGTTGGGACCCACCCGCAGAGCTGAAGAAACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR GCA 90 bp CGTGCTGTCCTTGAACATGTCTTCGGTCCTGGGCATTGTGACCCCAAAGTGTTTCTGGGTGCCGGAGGCTaGTGCTGGGCAATCCAGGCT +
Preference number: 2 (lower is better)
Translates to: RAVLEHVFGPGHCDPKVFLGAGG*CWAIQA
Trigger: AGCCTGGATTGCCCAGCAGCAGCCTCCGGCACCCAG...AAACACTTTGGGGTCACAATGCCCAGGACCGAAGACATGTTCAAGGACAGCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CCA 90 bp CCTTGGGCCTTTCAAGATTATTACAGACAACTCCAAGTAGCTAGAGGCCTGGCCGCCGGAGGCTGCTGCTaGGCAATCCAGGCTCCTGGC +
Preference number: 2 (lower is better)
Translates to: PWAFQDYYRQLQVARGLAAGGCC*AIQAPG
Trigger: GCCAGGAGCCTGGATTGCCCAGCAGCAGCCTCCGGC...GGCCAGGCCTCTAGCTACTTGGAGTTGTCTGTAATAATCTTGAAAGGCCCAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR GCA 90 bp ACCAGCATGCTGCTCACTGTGGGCCTGTTCCCTTCCATAACCTGTTTCCTCATTCCCCCATGTAGCCTCTaGCCAGTCTTCAACCCCCGC +
Preference number: 2 (lower is better)
Translates to: TSMLLTVGLFPSITCFLIPPCSL*PVFNPR
Trigger: GCGGGGGTTGAAGACTGGGCAGAGGCTACATGGGGG...AATGAGGAAACAGGTTATGGAAGGGAACAGGCCCACAGTGAGCAGCATGCTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR GCA 90 bp CTTGCTGGGGTCAGGCCCAAAGCTGATCTCACCCATTTGATTCCTATGGGCCGGGTAAAGGACAAACCCTaGAGCCCCCTTGGCATGCCT +
Preference number: 2 (lower is better)
Translates to: LAGVRPKADLTHLIPMGRVKDKP*SPLGMP
Trigger: AGGCATGCCAAGGGGGCTGCAGGGTTTGTCCTTTAC...CCGGCCCATAGGAATCAAATGGGTGAGATCAGCTTTGGGCCTGACCCCAGCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR TCA 90 bp CTTGCTGGGGTCAGGCCCAAAGCTGATCTCACCCATTTGATTCCTATGGGCCGGCCTTCACTTGGGCCATaGATGGCACAGGTAACCAAG +
Preference number: 2 (lower is better)
Translates to: LAGVRPKADLTHLIPMGRPSLGP*MAQVTK
Trigger: CTTGGTTACCTGTGCCATTCATGGCCCAAGTGAAGG...CCGGCCCATAGGAATCAAATGGGTGAGATCAGCTTTGGGCCTGACCCCAGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR TCA 90 bp CTTGCTGGGGTCAGGCCCAAAGCTGATCTCACCCATTTGATTCCTATGGGCCGGCTCAGGGCGAGTACATaGAAGGCCGTGAAGTGCTTT +
Preference number: 2 (lower is better)
Translates to: LAGVRPKADLTHLIPMGRLRAST*KAVKCF
Trigger: AAAGCACTTCACGGCCTTTCATGTACTCGCCCTGAG...CCGGCCCATAGGAATCAAATGGGTGAGATCAGCTTTGGGCCTGACCCCAGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR GCA 90 bp CTTGCTGGGGTCAGGCCCAAAGCTGATCTCACCCATTTGATTCCTATGGGCCGGTGGGCTCAGTCCTTTTaGAGTGACTCCCCAAGCTTG +
Preference number: 2 (lower is better)
Translates to: LAGVRPKADLTHLIPMGRWAQSF*SDSPSL
Trigger: CAAGCTTGGGGAGTCACTGCAAAAGGACTGAGCCCA...CCGGCCCATAGGAATCAAATGGGTGAGATCAGCTTTGGGCCTGACCCCAGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CCA 90 bp CTTGCTGGGGTCAGGCCCAAAGCTGATCTCACCCATTTGATTCCTATGGGCCGGAGCTCCTCATCAGAGTaGGTCCATGACAGCTCAGAG +
Preference number: 2 (lower is better)
Translates to: LAGVRPKADLTHLIPMGRSSSSE*VHDSSE
Trigger: CTCTGAGCTGTCATGGACCCACTCTGATGAGGAGCT...CCGGCCCATAGGAATCAAATGGGTGAGATCAGCTTTGGGCCTGACCCCAGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CCA 90 bp CGTGCTGTCCTTGAACATGTCTTCGGTCCTGGGCATTGTGACCCCAAAGTGTTTGGCAATCCAGGCTCCTaGCTGAGACTAGCAGGGACC +
Preference number: 2 (lower is better)
Translates to: RAVLEHVFGPGHCDPKVFGNPGS*LRLAGT
Trigger: GGTCCCTGCTAGTCTCAGCCAGGAGCCTGGATTGCC...AAACACTTTGGGGTCACAATGCCCAGGACCGAAGACATGTTCAAGGACAGCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CCA 90 bp ACAGCAAGGATATCCAGGGACTATCCATGTGGCCATAGGGAAGCAAGTGCTGTTGGAAGCCCAGGAAGGTaGGCCCCCAAACTCCTGGCT +
Preference number: 2 (lower is better)
Translates to: TARISRDYPCGHREASAVGSPGR*APKLLA
Trigger: AGCCAGGAGTTTGGGGGCCCACCTTCCTGGGCTTCC...AACAGCACTTGCTTCCCTATGGCCACATGGATAGTCCCTGGATATCCTTGCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CCA 90 bp CAGGGCTGGCCATGGAATGTTGAAGCTGGCCTGCCAGGAATTTTGAAGGCTGGGTTGGAACAATTCGGGTaGCCAGGGGTAAGGATGCTC +
Preference number: 2 (lower is better)
Translates to: QGWPWNVEAGLPGILKAGLEQFG*PGVRML
Trigger: GAGCATCCTTACCCCTGGCCACCCGAATTGTTCCAA...CCCAGCCTTCAAAATTCCTGGCAGGCCAGCTTCAACATTCCATGGCCAGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CCA 90 bp CAGGGCTGGCCATGGAATGTTGAAGCTGGCCTGCCAGGAATTTTGAAGGCTGGGGGGGTACCTCAAACTTaGAACAATTCGGGTGGCCAG +
Preference number: 2 (lower is better)
Translates to: QGWPWNVEAGLPGILKAGGVPQT*NNSGGQ
Trigger: CTGGCCACCCGAATTGTTCCAAGTTTGAGGTACCCC...CCCAGCCTTCAAAATTCCTGGCAGGCCAGCTTCAACATTCCATGGCCAGCCCTG
56% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CCA 90 bp CTTGCTGGGGTCAGGCCCAAAGCTGATCTCACCCATTTGATTCCTATGGGCCGGGCCTCGCTGGGAACCTaGATGAGTCCTATCTGTATG +
Preference number: 2 (lower is better)
Translates to: LAGVRPKADLTHLIPMGRASLGT*MSPICM
Trigger: CATACAGATAGGACTCATCCAGGTTCCCAGCGAGGC...CCGGCCCATAGGAATCAAATGGGTGAGATCAGCTTTGGGCCTGACCCCAGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CAA 90 bp GCTGTAGCTCACTGTCAGGCGGCTACATCCCTTGTCCTCTCTTGCTaGCCTGCCTTCAATGAGACGGCCCTTCCAGCTCTGACTTTTTGT +
Preference number: 2 (lower is better)
Translates to: AVAHCQAATSLVLSC*PAFNETALPALTFC
Trigger: ACAAAAAGTCAGAGCTGGAAGGGCCGTCTCATTGAAGGCAGGCAAGCAAGAGAGGACAAGGGATGTAGCCGCCTGACAGTGAGCTACAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CAA 90 bp CTCACCCATGGGAAAAGCAAGCCCAGGGACTTCAGTCTGTACGTTTaGTACCAACTCACTGGATCTGGACAGTGGGCAGGCTCTCAGGGA +
Preference number: 2 (lower is better)
Translates to: LTHGKSKPRDFSLYV*YQLTGSGQWAGSQG
Trigger: TCCCTGAGAGCCTGCCCACTGTCCAGATCCAGTGAGTTGGTACAAAACGTACAGACTGAAGTCCCTGGGCTTGCTTTTCCCATGGGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR TCA 90 bp CTTTTCCTTCACTATCCTCACCTTCAGAGCTGCCAGCACCCACCTGGAATGTGGTTCAAACCAAAGCCATaGGGCAAGCACCGCTCCTCC +
Preference number: 2 (lower is better)
Translates to: LFLHYPHLQSCQHPPGMWFKPKP*GKHRSS
Trigger: GGAGGAGCGGTGCTTGCCTCATGGCTTTGGTTTGAA...CCACATTCCAGGTGGGTGCTGGCAGCTCTGAAGGTGAGGATAGTGAAGGAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR TCA 90 bp CAGGGCTGGCCATGGAATGTTGAAGCTGGCCTGCCAGGAATTTTGAAGGCTGGGAACCCAAGGGTTTCCTaGTTTTTCCCTCCCTTAGGG +
Preference number: 2 (lower is better)
Translates to: QGWPWNVEAGLPGILKAGNPRVS*FFPPLG
Trigger: CCCTAAGGGAGGGAAAAATCAGGAAACCCTTGGGTT...CCCAGCCTTCAAAATTCCTGGCAGGCCAGCTTCAACATTCCATGGCCAGCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR TCA 90 bp GGGACTTCAGTCTGTACGTTTTGTACCAACTCACTGGATCTGGACAGTGGGCAGGCCTCGTGCTGTCCTTaGACATGTCTTCGGTCCTGG +
Preference number: 2 (lower is better)
Translates to: GTSVCTFCTNSLDLDSGQASCCP*TCLRSW
Trigger: CCAGGACCGAAGACATGTTCAAGGACAGCACGAGGC...CTGCCCACTGTCCAGATCCAGTGAGTTGGTACAAAACGTACAGACTGAAGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR TCA 90 bp CAGGGCTGGCCATGGAATGTTGAAGCTGGCCTGCCAGGAATTTTGAAGGCTGGGTTGATATGGAAGCTCTaGGCCTCGCTTAGTCAGTGC +
Preference number: 2 (lower is better)
Translates to: QGWPWNVEAGLPGILKAGLIWKL*ASLSQC
Trigger: GCACTGACTAAGCGAGGCTCAGAGCTTCCATATCAA...CCCAGCCTTCAAAATTCCTGGCAGGCCAGCTTCAACATTCCATGGCCAGCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR GCA 90 bp CGTGCTGTCCTTGAACATGTCTTCGGTCCTGGGCATTGTGACCCCAAAGTGTTTCCTCACCTTCAGAGCTaGCAGCACCCACCTGGAATG +
Preference number: 2 (lower is better)
Translates to: RAVLEHVFGPGHCDPKVFPHLQS*QHPPGM
Trigger: CATTCCAGGTGGGTGCTGGCAGCTCTGAAGGTGAGG...AAACACTTTGGGGTCACAATGCCCAGGACCGAAGACATGTTCAAGGACAGCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR GCA 90 bp CTTGCTGGGGTCAGGCCCAAAGCTGATCTCACCCATTTGATTCCTATGGGCCGGGAAGGAAAATCCCCCTaGTATCAGTGGCTGGAATGG +
Preference number: 2 (lower is better)
Translates to: LAGVRPKADLTHLIPMGREGKSP*YQWLEW
Trigger: CCATTCCAGCCACTGATAGCAGGGGGATTTTCCTTC...CCGGCCCATAGGAATCAAATGGGTGAGATCAGCTTTGGGCCTGACCCCAGCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CCA 90 bp CCTTGGGCCTTTCAAGATTATTACAGACAACTCCAAGTAGCTAGAGGCCTGGCCGGCAATCCAGGCTCCTaGCTGAGACTAGCAGGGACC +
Preference number: 2 (lower is better)
Translates to: PWAFQDYYRQLQVARGLAGNPGS*LRLAGT
Trigger: GGTCCCTGCTAGTCTCAGCCAGGAGCCTGGATTGCC...GGCCAGGCCTCTAGCTACTTGGAGTTGTCTGTAATAATCTTGAAAGGCCCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CCA 90 bp CAGGGCTGGCCATGGAATGTTGAAGCTGGCCTGCCAGGAATTTTGAAGGCTGGGGCTTGGCTAGGCTTGTaGATCTCCATCACAGCAAGA +
Preference number: 2 (lower is better)
Translates to: QGWPWNVEAGLPGILKAGAWLGL*ISITAR
Trigger: TCTTGCTGTGATGGAGATCCACAAGCCTAGCCAAGC...CCCAGCCTTCAAAATTCCTGGCAGGCCAGCTTCAACATTCCATGGCCAGCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CCA 90 bp GGGACTTCAGTCTGTACGTTTTGTACCAACTCACTGGATCTGGACAGTGGGCAGCTGTCCCCGCTCTCCTaGGCTCAGTCCTTTTGCAGT +
Preference number: 2 (lower is better)
Translates to: GTSVCTFCTNSLDLDSGQLSPLS*AQSFCS
Trigger: ACTGCAAAAGGACTGAGCCCAGGAGAGCGGGGACAG...CTGCCCACTGTCCAGATCCAGTGAGTTGGTACAAAACGTACAGACTGAAGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CCA 90 bp CTTGCTGGGGTCAGGCCCAAAGCTGATCTCACCCATTTGATTCCTATGGGCCGGGCTCAGCTCAGAGACTaGGCTTCCCAGCTCTATAAA +
Preference number: 2 (lower is better)
Translates to: LAGVRPKADLTHLIPMGRAQLRD*ASQLYK
Trigger: TTTATAGAGCTGGGAAGCCCAGTCTCTGAGCTGAGC...CCGGCCCATAGGAATCAAATGGGTGAGATCAGCTTTGGGCCTGACCCCAGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CAA 90 bp GTGTTTTGTCCAAGTGAGGCCTTTAGTTGCAAATTCTCATCCTCCTaGTGCTGCCAGTTAGATGTGCCTCTGGGTCCCTCCCCAGGGCTC +
Preference number: 2 (lower is better)
Translates to: VFCPSEAFSCKFSSS*CCQLDVPLGPSPGL
Trigger: GAGCCCTGGGGAGGGACCCAGAGGCACATCTAACTGGCAGCACAAGGAGGATGAGAATTTGCAACTAAAGGCCTCACTTGGACAAAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR TCA 90 bp CCCAGGTTCTCAGCCTGGGGTATTAAGCTGCTAATAACACGCCTACATACTCAGCCTGCTCAACAGCTCTaGGTTCCTACCCTGGACCAC +
Preference number: 2 (lower is better)
Translates to: PRFSAWGIKLLITRLHTQPAQQL*VPTLDH
Trigger: GTGGTCCAGGGTAGGAACTCAGAGCTGTTGAGCAGG...CTGAGTATGTAGGCGTGTTATTAGCAGCTTAATACCCCAGGCTGAGAACCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
3UTR-3UTR TCA 90 bp CCTTGGGCCTTTCAAGATTATTACAGACAACTCCAAGTAGCTAGAGGCCTGGCCCTTGCCTGCCTTCAATaGGACGGCCCTTCCAGCTCT +
Preference number: 2 (lower is better)
Translates to: PWAFQDYYRQLQVARGLALACLQ*DGPSSS
Trigger: AGAGCTGGAAGGGCCGTCTCATTGAAGGCAGGCAAG...GGCCAGGCCTCTAGCTACTTGGAGTTGTCTGTAATAATCTTGAAAGGCCCAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR GCA 90 bp ACCAGCATGCTGCTCACTGTGGGCCTGTTCCCTTCCATAACCTGTTTCCTCATTAGGTCCAGGGCCAGATaGTTTGGCCAGAGACCTTTC +
Preference number: 2 (lower is better)
Translates to: TSMLLTVGLFPSITCFLIRSRAR*FGQRPF
Trigger: GAAAGGTCTCTGGCCAAAGCATCTGGCCCTGGACCT...AATGAGGAAACAGGTTATGGAAGGGAACAGGCCCACAGTGAGCAGCATGCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR GCA 90 bp CTTTTCCTTCACTATCCTCACCTTCAGAGCTGCCAGCACCCACCTGGAATGTGGACCAAGAGCTTGGCCTaGCTGCAAGCTCTATGGTCA +
Preference number: 2 (lower is better)
Translates to: LFLHYPHLQSCQHPPGMWTKSLA*LQALWS
Trigger: TGACCATAGAGCTTGCAGGCAGGCCAAGCTCTTGGT...CCACATTCCAGGTGGGTGCTGGCAGCTCTGAAGGTGAGGATAGTGAAGGAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR GCA 90 bp CTTGCTGGGGTCAGGCCCAAAGCTGATCTCACCCATTTGATTCCTATGGGCCGGCAGTTCATACAAATCTaGTCAGCTCAGAGACTGGGC +
Preference number: 2 (lower is better)
Translates to: LAGVRPKADLTHLIPMGRQFIQI*SAQRLG
Trigger: GCCCAGTCTCTGAGCTGAGCAGATTTGTATGAACTG...CCGGCCCATAGGAATCAAATGGGTGAGATCAGCTTTGGGCCTGACCCCAGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR GCA 90 bp ACAGCAAGGATATCCAGGGACTATCCATGTGGCCATAGGGAAGCAAGTGCTGTTGCCTCGCTTAGTCAGTaGCTCGCTGGGAACCTGGAT +
Preference number: 2 (lower is better)
Translates to: TARISRDYPCGHREASAVASLSQ*LAGNLD
Trigger: ATCCAGGTTCCCAGCGAGGCACTGACTAAGCGAGGC...AACAGCACTTGCTTCCCTATGGCCACATGGATAGTCCCTGGATATCCTTGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CCA 90 bp ACAGCAAGGATATCCAGGGACTATCCATGTGGCCATAGGGAAGCAAGTGCTGTTAGAGAGGACATGGCCTaGTCAGGTAGGAGGAAGGGG +
Preference number: 2 (lower is better)
Translates to: TARISRDYPCGHREASAVREDMA*SGRRKG
Trigger: CCCCTTCCTCCTACCTGACCAGGCCATGTCCTCTCT...AACAGCACTTGCTTCCCTATGGCCACATGGATAGTCCCTGGATATCCTTGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CCA 90 bp TGTAGCCTGCTCAACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGCTAGAGAGGACATGGCCTaGTCAGGTAGGAGGAAGGGG +
Preference number: 2 (lower is better)
Translates to: CSLLNSSEFLPWTTSVYAREDMA*SGRRKG
Trigger: CCCCTTCCTCCTACCTGACCAGGCCATGTCCTCTCT...AGCATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGTTGAGCAGGCTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
3UTR-3UTR CCA 90 bp CAGGGCTGGCCATGGAATGTTGAAGCTGGCCTGCCAGGAATTTTGAAGGCTGGGCCCAGGTTCTCAGCCTaGGGTATTAAGCTGCTAATA +
Preference number: 2 (lower is better)
Translates to: QGWPWNVEAGLPGILKAGPRFSA*GIKLLI
Trigger: TATTAGCAGCTTAATACCCCAGGCTGAGAACCTGGG...CCCAGCCTTCAAAATTCCTGGCAGGCCAGCTTCAACATTCCATGGCCAGCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CCA 90 bp CGTGCTGTCCTTGAACATGTCTTCGGTCCTGGGCATTGTGACCCCAAAGTGTTTCCTTTCTCCTCTCTGTaGTTCCACCCCAGCCCACAT +
Preference number: 2 (lower is better)
Translates to: RAVLEHVFGPGHCDPKVFPFSSL*FHPSPH
Trigger: ATGTGGGCTGGGGTGGAACCACAGAGAGGAGAAAGG...AAACACTTTGGGGTCACAATGCCCAGGACCGAAGACATGTTCAAGGACAGCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CCA 90 bp GGGACTTCAGTCTGTACGTTTTGTACCAACTCACTGGATCTGGACAGTGGGCAGCTGAAAAAGGGGTGCTaGACCTGGGCTCTTCCAGAC +
Preference number: 2 (lower is better)
Translates to: GTSVCTFCTNSLDLDSGQLKKGC*TWALPD
Trigger: GTCTGGAAGAGCCCAGGTCCAGCACCCCTTTTTCAG...CTGCCCACTGTCCAGATCCAGTGAGTTGGTACAAAACGTACAGACTGAAGTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR TCA 90 bp TTAGGGAAGAGCAGAGAGGACATGGCCTGGTCAGGTAGGAGGAAGGGGATAGAGGTTGCATACAATGTGTaGCTCCAGATTTGGATGGGC +
Preference number: 2 (lower is better)
Translates to: LGKSREDMAWSGRRKGIEVAYNV*LQIWMG
Trigger: GCCCATCCAAATCTGGAGTCACACATTGTATGCAAC...CTCTATCCCCTTCCTCCTACCTGACCAGGCCATGTCCTCTCTGCTCTTCCCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
3UTR-3UTR TCA 90 bp GGGACTTCAGTCTGTACGTTTTGTACCAACTCACTGGATCTGGACAGTGGGCAGCTCAGGGCGAGTACATaGAAGGCCGTGAAGTGCTTT +
Preference number: 2 (lower is better)
Translates to: GTSVCTFCTNSLDLDSGQLRAST*KAVKCF
Trigger: AAAGCACTTCACGGCCTTTCATGTACTCGCCCTGAG...CTGCCCACTGTCCAGATCCAGTGAGTTGGTACAAAACGTACAGACTGAAGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR TCA 90 bp CGTGCTGTCCTTGAACATGTCTTCGGTCCTGGGCATTGTGACCCCAAAGTGTTTAGATGCTTCAGTACGTaGGCCTGTGTGGGGATCAGA +
Preference number: 2 (lower is better)
Translates to: RAVLEHVFGPGHCDPKVFRCFST*ACVGIR
Trigger: TCTGATCCCCACACAGGCTCACGTACTGAAGCATCT...AAACACTTTGGGGTCACAATGCCCAGGACCGAAGACATGTTCAAGGACAGCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR TCA 90 bp CAGGGCTGGCCATGGAATGTTGAAGCTGGCCTGCCAGGAATTTTGAAGGCTGGGCACTTCCAAGCTGTGTaGCCTTTTAGCAAGTCTCAA +
Preference number: 2 (lower is better)
Translates to: QGWPWNVEAGLPGILKAGHFQAV*PFSKSQ
Trigger: TTGAGACTTGCTAAAAGGTCACACAGCTTGGAAGTG...CCCAGCCTTCAAAATTCCTGGCAGGCCAGCTTCAACATTCCATGGCCAGCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR GCA 90 bp ACAGCAAGGATATCCAGGGACTATCCATGTGGCCATAGGGAAGCAAGTGCTGTTGTGCTGCTAGGGAACTaGTCCAGCACCGGTGTAAGA +
Preference number: 2 (lower is better)
Translates to: TARISRDYPCGHREASAVVLLGN*SSTGVR
Trigger: TCTTACACCGGTGCTGGAGCAGTTCCCTAGCAGCAC...AACAGCACTTGCTTCCCTATGGCCACATGGATAGTCCCTGGATATCCTTGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR GCA 90 bp CTTTTCCTTCACTATCCTCACCTTCAGAGCTGCCAGCACCCACCTGGAATGTGGCCTAGAGATGTAGCCTaGTCAACAGCTCTGAGTTCC +
Preference number: 2 (lower is better)
Translates to: LFLHYPHLQSCQHPPGMWPRDVA*STALSS
Trigger: GGAACTCAGAGCTGTTGAGCAGGCTACATCTCTAGG...CCACATTCCAGGTGGGTGCTGGCAGCTCTGAAGGTGAGGATAGTGAAGGAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR GCA 90 bp TGGGCCTTTCAAGATTATTACAGACAACTCCAAGTAGCTAGAGGCCTGGCCTTATCCAAGGCCTCGGGATaGTGGGATCCTACCACCCTG +
Preference number: 2 (lower is better)
Translates to: WAFQDYYRQLQVARGLALSKASG*WDPTTL
Trigger: CAGGGTGGTAGGATCCCAGCATCCCGAGGCCTTGGA...TAAGGCCAGGCCTCTAGCTACTTGGAGTTGTCTGTAATAATCTTGAAAGGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR GCA 90 bp GGGACTTCAGTCTGTACGTTTTGTACCAACTCACTGGATCTGGACAGTGGGCAGTGCAATTTCTGTTCCTaGCATCCGCCCCCATGTAGC +
Preference number: 2 (lower is better)
Translates to: GTSVCTFCTNSLDLDSGQCNFCS*HPPPCS
Trigger: GCTACATGGGGGCGGATGGCAGGAACAGAAATTGCA...CTGCCCACTGTCCAGATCCAGTGAGTTGGTACAAAACGTACAGACTGAAGTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CCA 90 bp CCAAGAGCTTGGCCTGCCTGCAAGCTCTATGGTCAGACAGGTGAGTCCTGGCACCTTGGTCTGTTGCAATaGTTCTCAGGAGACATTTCA +
Preference number: 2 (lower is better)
Translates to: PRAWPACKLYGQTGESWHLGLLQ*FSGDIS
Trigger: TGAAATGTCTCCTGAGAACCATTGCAACAGACCAAG...GTGCCAGGACTCACCTGTCTGACCATAGAGCTTGCAGGCAGGCCAAGCTCTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CCA 90 bp ACCAGCATGCTGCTCACTGTGGGCCTGTTCCCTTCCATAACCTGTTTCCTCATTAGCTCCTCATCAGAGTaGGTCCATGACAGCTCAGAG +
Preference number: 2 (lower is better)
Translates to: TSMLLTVGLFPSITCFLISSSSE*VHDSSE
Trigger: CTCTGAGCTGTCATGGACCCACTCTGATGAGGAGCT...AATGAGGAAACAGGTTATGGAAGGGAACAGGCCCACAGTGAGCAGCATGCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CCA 90 bp CCTTGGGCCTTTCAAGATTATTACAGACAACTCCAAGTAGCTAGAGGCCTGGCCCAGACAGGTGAGTCCTaGCACTGGGAAGGGCAAAAG +
Preference number: 2 (lower is better)
Translates to: PWAFQDYYRQLQVARGLAQTGES*HWEGQK
Trigger: CTTTTGCCCTTCCCAGTGCCAGGACTCACCTGTCTG...GGCCAGGCCTCTAGCTACTTGGAGTTGTCTGTAATAATCTTGAAAGGCCCAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CCA 90 bp CCTTGGGCCTTTCAAGATTATTACAGACAACTCCAAGTAGCTAGAGGCCTGGCCGCCTCGGTTGGCCTTTaGGTTGGACTCAACAGCATG +
Preference number: 2 (lower is better)
Translates to: PWAFQDYYRQLQVARGLAASVGL*VGLNSM
Trigger: CATGCTGTTGAGTCCAACCCAAAGGCCAACCGAGGC...GGCCAGGCCTCTAGCTACTTGGAGTTGTCTGTAATAATCTTGAAAGGCCCAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CAA 90 bp CAGTTAACATCACTGTGCAAATCAGAAGGTCCAGGGCCAGATGCTTaGGCCAGAGACCTTTCAAACCAAAGCCATGAGGCAAGCACCGCT +
Preference number: 2 (lower is better)
Translates to: QLTSLCKSEGPGPDA*ARDLSNQSHEASTA
Trigger: AGCGGTGCTTGCCTCATGGCTTTGGTTTGAAAGGTCTCTGGCCAAAGCATCTGGCCCTGGACCTTCTGATTTGCACAGTGATGTTAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
3UTR CAA 90 bp ATATCCAGGGACTATCCATGTGGCCATAGGGAAGCAAGTGCTGTTTaGTCCCTTTCTAGCTTTGTGGCAGCCAGTCCCAACTCCTGTGTG +
Preference number: 2 (lower is better)
Translates to: ISRDYPCGHREASAV*SLSSFVAASPNSCV
Trigger: CACACAGGAGTTGGGACTGGCTGCCACAAAGCTAGAAAGGGACAAAACAGCACTTGCTTCCCTATGGCCACATGGATAGTCCCTGGATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CAA 90 bp GATGCTGGTCTTGCTGGGGTCAGGCCCAAAGCTGATCTCACCCATTaGATTCCTATGGGCCGGTACTTTGCAAAGCTGTTACATCTGTTC +
Preference number: 2 (lower is better)
Translates to: DAGLAGVRPKADLTH*IPMGRYFAKLLHLF
Trigger: GAACAGATGTAACAGCTTTGCAAAGTACCGGCCCATAGGAATCAAATGGGTGAGATCAGCTTTGGGCCTGACCCCAGCAAGACCAGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR TCA 90 bp ACTTGGGCCATGAATGGCACAGGTAACCAAGAGCTTGGCCTGCCTGCAAGCTCTCACCGGTGTAAGACTTaGGTAGTTGCATACAATGTG +
Preference number: 2 (lower is better)
Translates to: TWAMNGTGNQELGLPASSHRCKT*VVAYNV
Trigger: CACATTGTATGCAACTACTCAAGTCTTACACCGGTG...AGAGCTTGCAGGCAGGCCAAGCTCTTGGTTACCTGTGCCATTCATGGCCCAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR TCA 90 bp GTGTTTCTTCAGCTCTGCGGGTGGGTCCCAACTGGCCCACTCTACTACTGCCCCGTCCCTTCAGTTCCATaGGTCTATGAAATGTTTATT +
Preference number: 2 (lower is better)
Translates to: VFLQLCGWVPTGPLYYCPVPSVP*VYEMFI
Trigger: AATAAACATTTCATAGACTCATGGAACTGAAGGGAC...GGGGCAGTAGTAGAGTGGGCCAGTTGGGACCCACCCGCAGAGCTGAAGAAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR GCA 90 bp CTTGCTGGGGTCAGGCCCAAAGCTGATCTCACCCATTTGATTCCTATGGGCCGGTTGTTCTTGGTCTGTTaGAATGGTTCTCAGGAGACA +
Preference number: 2 (lower is better)
Translates to: LAGVRPKADLTHLIPMGRLFLVC*NGSQET
Trigger: TGTCTCCTGAGAACCATTGCAACAGACCAAGAACAA...CCGGCCCATAGGAATCAAATGGGTGAGATCAGCTTTGGGCCTGACCCCAGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR GCA 90 bp CCTTGGGCCTTTCAAGATTATTACAGACAACTCCAAGTAGCTAGAGGCCTGGCCACCAAGAGCTTGGCCTaGCTGCAAGCTCTATGGTCA +
Preference number: 2 (lower is better)
Translates to: PWAFQDYYRQLQVARGLATKSLA*LQALWS
Trigger: TGACCATAGAGCTTGCAGGCAGGCCAAGCTCTTGGT...GGCCAGGCCTCTAGCTACTTGGAGTTGTCTGTAATAATCTTGAAAGGCCCAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR GCA 90 bp CCTTGGGCCTTTCAAGATTATTACAGACAACTCCAAGTAGCTAGAGGCCTGGCCTGCAATTTCTGTTCCTaGCATCCGCCCCCATGTAGC +
Preference number: 2 (lower is better)
Translates to: PWAFQDYYRQLQVARGLACNFCS*HPPPCS
Trigger: GCTACATGGGGGCGGATGGCAGGAACAGAAATTGCA...GGCCAGGCCTCTAGCTACTTGGAGTTGTCTGTAATAATCTTGAAAGGCCCAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR GCA 90 bp CGTGCTGTCCTTGAACATGTCTTCGGTCCTGGGCATTGTGACCCCAAAGTGTTTATACTGAAAAAGGGGTaGTGGACCTGGGCTCTTCCA +
Preference number: 2 (lower is better)
Translates to: RAVLEHVFGPGHCDPKVFILKKG*WTWALP
Trigger: TGGAAGAGCCCAGGTCCAGCACCCCTTTTTCAGTAT...AAACACTTTGGGGTCACAATGCCCAGGACCGAAGACATGTTCAAGGACAGCACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR GCA 90 bp TGGGCCTTTCAAGATTATTACAGACAACTCCAAGTAGCTAGAGGCCTGGCCTTAGCCTCGCTTAGTCAGTaGCTCGCTGGGAACCTGGAT +
Preference number: 2 (lower is better)
Translates to: WAFQDYYRQLQVARGLALASLSQ*LAGNLD
Trigger: ATCCAGGTTCCCAGCGAGGCACTGACTAAGCGAGGC...TAAGGCCAGGCCTCTAGCTACTTGGAGTTGTCTGTAATAATCTTGAAAGGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CCA 90 bp CCTTGGGCCTTTCAAGATTATTACAGACAACTCCAAGTAGCTAGAGGCCTGGCCTTCAACCCCCGCCTTTaGAGTCCGTGGAGGAAAAGA +
Preference number: 2 (lower is better)
Translates to: PWAFQDYYRQLQVARGLAFNPRL*SPWRKR
Trigger: TCTTTTCCTCCACGGACTCCAAAGGCGGGGGTTGAA...GGCCAGGCCTCTAGCTACTTGGAGTTGTCTGTAATAATCTTGAAAGGCCCAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CCA 90 bp ACAGCAAGGATATCCAGGGACTATCCATGTGGCCATAGGGAAGCAAGTGCTGTTGGGGTACCTCAAACTTaGAACAATTCGGGTGGCCAG +
Preference number: 2 (lower is better)
Translates to: TARISRDYPCGHREASAVGVPQT*NNSGGQ
Trigger: CTGGCCACCCGAATTGTTCCAAGTTTGAGGTACCCC...AACAGCACTTGCTTCCCTATGGCCACATGGATAGTCCCTGGATATCCTTGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CCA 90 bp CTTGCTGGGGTCAGGCCCAAAGCTGATCTCACCCATTTGATTCCTATGGGCCGGTTGAAGGCTGGGTCCTaGAACCATATAATGCCTAAT +
Preference number: 2 (lower is better)
Translates to: LAGVRPKADLTHLIPMGRLKAGS*NHIMPN
Trigger: ATTAGGCATTATATGGTTCCAGGACCCAGCCTTCAA...CCGGCCCATAGGAATCAAATGGGTGAGATCAGCTTTGGGCCTGACCCCAGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CCA 90 bp TGGGCCTTTCAAGATTATTACAGACAACTCCAAGTAGCTAGAGGCCTGGCCTTAAGGCAGGGCTGGCCATaGAATGTTGAAGCTGGCCTG +
Preference number: 2 (lower is better)
Translates to: WAFQDYYRQLQVARGLALRQGWP*NVEAGL
Trigger: CAGGCCAGCTTCAACATTCCATGGCCAGCCCTGCCT...TAAGGCCAGGCCTCTAGCTACTTGGAGTTGTCTGTAATAATCTTGAAAGGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CAA 90 bp GCTGCTCACTGTGGGCCTGTTCCCTTCCATAACCTGTTTCCTCATTaGTCAATTGACTGTAATAACTCTAACCCTGTCCCTCTCAGGGCG +
Preference number: 2 (lower is better)
Translates to: AAHCGPVPFHNLFPH*SIDCNNSNPVPLRA
Trigger: CGCCCTGAGAGGGACAGGGTTAGAGTTATTACAGTCAATTGACAAATGAGGAAACAGGTTATGGAAGGGAACAGGCCCACAGTGAGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CAA 90 bp ACCAAGGACATGGGTCTCCCAATAGAAAGATGCCTCGTGCTGTCCTaGAACATGTCTTCGGTCCTGGGCATTGTGACCCCAAAGTGTTTT +
Preference number: 2 (lower is better)
Translates to: TKDMGLPIERCLVLS*NMSSVLGIVTPKCF
Trigger: AAAACACTTTGGGGTCACAATGCCCAGGACCGAAGACATGTTCAAGGACAGCACGAGGCATCTTTCTATTGGGAGACCCATGTCCTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CAA 90 bp AGGCAGGGCTGGCCATGGAATGTTGAAGCTGGCCTGCCAGGAATTTaGAAGGCTGGGTCCTGGAACCATATAATGCCTAATTTCAGAAAC +
Preference number: 2 (lower is better)
Translates to: RQGWPWNVEAGLPGI*KAGSWNHIMPNFRN
Trigger: GTTTCTGAAATTAGGCATTATATGGTTCCAGGACCCAGCCTTCAAAATTCCTGGCAGGCCAGCTTCAACATTCCATGGCCAGCCCTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR TCA 90 bp CTTTTCCTTCACTATCCTCACCTTCAGAGCTGCCAGCACCCACCTGGAATGTGGGACAAAATCACCTTTTaGGGAAGTGCCAGGTCAGTT +
Preference number: 2 (lower is better)
Translates to: LFLHYPHLQSCQHPPGMWDKITF*GSARSV
Trigger: AACTGACCTGGCACTTCCTCAAAAGGTGATTTTGTC...CCACATTCCAGGTGGGTGCTGGCAGCTCTGAAGGTGAGGATAGTGAAGGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR TCA 90 bp CCATTATGTTTCAGGCTTTCACTATTTGCAGGCAATCCAGCTCCCAGACTCAAACTTGCCTGCCTTCAATaGGACGGCCCTTCCAGCTCT +
Preference number: 2 (lower is better)
Translates to: PLCFRLSLFAGNPAPRLKLACLQ*DGPSSS
Trigger: AGAGCTGGAAGGGCCGTCTCATTGAAGGCAGGCAAG...TTTGAGTCTGGGAGCTGGATTGCCTGCAAATAGTGAAAGCCTGAAACATAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR TCA 90 bp TGGGCCTTTCAAGATTATTACAGACAACTCCAAGTAGCTAGAGGCCTGGCCTTATCCAGACTATCTGGCTaGCCCGAGGAGAAGGTCTCT +
Preference number: 2 (lower is better)
Translates to: WAFQDYYRQLQVARGLALSRLSG*PEEKVS
Trigger: AGAGACCTTCTCCTCGGGTCAGCCAGATAGTCTGGA...TAAGGCCAGGCCTCTAGCTACTTGGAGTTGTCTGTAATAATCTTGAAAGGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR GCA 90 bp CTTTTCCTTCACTATCCTCACCTTCAGAGCTGCCAGCACCCACCTGGAATGTGGCAGTTAACATCACTGTaGAAATCAGAAGGTCCAGGG +
Preference number: 2 (lower is better)
Translates to: LFLHYPHLQSCQHPPGMWQLTSL*KSEGPG
Trigger: CCCTGGACCTTCTGATTTGCACAGTGATGTTAACTG...CCACATTCCAGGTGGGTGCTGGCAGCTCTGAAGGTGAGGATAGTGAAGGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR GCA 90 bp GTGGGAGAATACAGGATGGAAAAGCAGACTTCCACGTATTTTCACTTAACTGCATCCAAGGCCTCGGGATaGTGGGATCCTACCACCCTG +
Preference number: 2 (lower is better)
Translates to: VGEYRMEKQTSTYFHLTASKASG*WDPTTL
Trigger: CAGGGTGGTAGGATCCCAGCATCCCGAGGCCTTGGA...TGCAGTTAAGTGAAAATACGTGGAAGTCTGCTTTTCCATCCTGTATTCTCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR GCA 90 bp GTGGGAGAATACAGGATGGAAAAGCAGACTTCCACGTATTTTCACTTAACTGCATTCGGCCAGTCCACCTaGTCCTTCTCCTGGAGGTGG +
Preference number: 2 (lower is better)
Translates to: VGEYRMEKQTSTYFHLTAFGQST*SFSWRW
Trigger: CCACCTCCAGGAGAAGGAGCAGGTGGACTGGCCGAA...TGCAGTTAAGTGAAAATACGTGGAAGTCTGCTTTTCCATCCTGTATTCTCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CCA 90 bp CCATTATGTTTCAGGCTTTCACTATTTGCAGGCAATCCAGCTCCCAGACTCAAAAGAGAGGACATGGCCTaGTCAGGTAGGAGGAAGGGG +
Preference number: 2 (lower is better)
Translates to: PLCFRLSLFAGNPAPRLKREDMA*SGRRKG
Trigger: CCCCTTCCTCCTACCTGACCAGGCCATGTCCTCTCT...TTTGAGTCTGGGAGCTGGATTGCCTGCAAATAGTGAAAGCCTGAAACATAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CCA 90 bp ACAGCAAGGATATCCAGGGACTATCCATGTGGCCATAGGGAAGCAAGTGCTGTTTCCCTTAGGGAGACATaGGAGGTTGGGGTAAGGATA +
Preference number: 2 (lower is better)
Translates to: TARISRDYPCGHREASAVSLRET*EVGVRI
Trigger: TATCCTTACCCCAACCTCCCATGTCTCCCTAAGGGA...AACAGCACTTGCTTCCCTATGGCCACATGGATAGTCCCTGGATATCCTTGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CCA 90 bp TGGGCCTTTCAAGATTATTACAGACAACTCCAAGTAGCTAGAGGCCTGGCCTTAGTGACTCCCCAAGCTTaGCTAGGCTTGTGGATCTCC +
Preference number: 2 (lower is better)
Translates to: WAFQDYYRQLQVARGLALVTPQA*LGLWIS
Trigger: GGAGATCCACAAGCCTAGCCAAGCTTGGGGAGTCAC...TAAGGCCAGGCCTCTAGCTACTTGGAGTTGTCTGTAATAATCTTGAAAGGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CCA 90 bp CCATTATGTTTCAGGCTTTCACTATTTGCAGGCAATCCAGCTCCCAGACTCAAACTGTCCCCGCTCTCCTaGGCTCAGTCCTTTTGCAGT +
Preference number: 2 (lower is better)
Translates to: PLCFRLSLFAGNPAPRLKLSPLS*AQSFCS
Trigger: ACTGCAAAAGGACTGAGCCCAGGAGAGCGGGGACAG...TTTGAGTCTGGGAGCTGGATTGCCTGCAAATAGTGAAAGCCTGAAACATAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CCA 90 bp GGGACTTCAGTCTGTACGTTTTGTACCAACTCACTGGATCTGGACAGTGGGCAGGCTCATTACAGGTCCTaGCCCAAAGCAGTTCATACA +
Preference number: 2 (lower is better)
Translates to: GTSVCTFCTNSLDLDSGQAHYRS*PKAVHT
Trigger: TGTATGAACTGCTTTGGGCCAGGACCTGTAATGAGC...CTGCCCACTGTCCAGATCCAGTGAGTTGGTACAAAACGTACAGACTGAAGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CCA 90 bp TGGGCCTTTCAAGATTATTACAGACAACTCCAAGTAGCTAGAGGCCTGGCCTTACCTGTGTGCCTCGGTTaGCCTTTGGGTTGGACTCAA +
Preference number: 2 (lower is better)
Translates to: WAFQDYYRQLQVARGLALPVCLG*PLGWTQ
Trigger: TTGAGTCCAACCCAAAGGCCAACCGAGGCACACAGG...TAAGGCCAGGCCTCTAGCTACTTGGAGTTGTCTGTAATAATCTTGAAAGGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR TCA 90 bp TGTAGCCTGCTCAACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGCTGTTGCATACAATGTGTaGCTCCAGATTTGGATGGGC +
Preference number: 2 (lower is better)
Translates to: CSLLNSSEFLPWTTSVYAVAYNV*LQIWMG
Trigger: GCCCATCCAAATCTGGAGTCACACATTGTATGCAAC...AGCATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGTTGAGCAGGCTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
3UTR-3UTR TCA 90 bp CTTGCTGGGGTCAGGCCCAAAGCTGATCTCACCCATTTGATTCCTATGGGCCGGGTCCCTTCAGTTCCATaGGTCTATGAAATGTTTATT +
Preference number: 2 (lower is better)
Translates to: LAGVRPKADLTHLIPMGRVPSVP*VYEMFI
Trigger: AATAAACATTTCATAGACTCATGGAACTGAAGGGAC...CCGGCCCATAGGAATCAAATGGGTGAGATCAGCTTTGGGCCTGACCCCAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR TCA 90 bp CGTGCTGTCCTTGAACATGTCTTCGGTCCTGGGCATTGTGACCCCAAAGTGTTTACTTTTTGTCTAGCTTaGCCACCGTGCCATCTAGAA +
Preference number: 2 (lower is better)
Translates to: RAVLEHVFGPGHCDPKVFTFCLA*PPCHLE
Trigger: TTCTAGATGGCACGGTGGTCAAGCTAGACAAAAAGT...AAACACTTTGGGGTCACAATGCCCAGGACCGAAGACATGTTCAAGGACAGCACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR GCA 90 bp CGTGCTGTCCTTGAACATGTCTTCGGTCCTGGGCATTGTGACCCCAAAGTGTTTATAAACCCTACTCTCTaGTTGCCTCTAGACTGGGAT +
Preference number: 2 (lower is better)
Translates to: RAVLEHVFGPGHCDPKVFINPTL*LPLDWD
Trigger: ATCCCAGTCTAGAGGCAAGCAGAGAGTAGGGTTTAT...AAACACTTTGGGGTCACAATGCCCAGGACCGAAGACATGTTCAAGGACAGCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR GCA 90 bp CTTTTCCTTCACTATCCTCACCTTCAGAGCTGCCAGCACCCACCTGGAATGTGGTTGTTCTTGGTCTGTTaGAATGGTTCTCAGGAGACA +
Preference number: 2 (lower is better)
Translates to: LFLHYPHLQSCQHPPGMWLFLVC*NGSQET
Trigger: TGTCTCCTGAGAACCATTGCAACAGACCAAGAACAA...CCACATTCCAGGTGGGTGCTGGCAGCTCTGAAGGTGAGGATAGTGAAGGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR GCA 90 bp TGTTTCCTCATTTGTCAATTGACTGTAATAACTCTAACCCTGTCCCTCTCAGGGCCTCACCTTCAGAGCTaGCAGCACCCACCTGGAATG +
Preference number: 2 (lower is better)
Translates to: CFLICQLTVITLTLSLSGPHLQS*QHPPGM
Trigger: CATTCCAGGTGGGTGCTGGCAGCTCTGAAGGTGAGG...CCCTGAGAGGGACAGGGTTAGAGTTATTACAGTCAATTGACAAATGAGGAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CCA 90 bp CCATTATGTTTCAGGCTTTCACTATTTGCAGGCAATCCAGCTCCCAGACTCAAAGGTCCTAAAGTTCCTTaGAAGCCCAGGAAGGTGGGC +
Preference number: 2 (lower is better)
Translates to: PLCFRLSLFAGNPAPRLKGPKVP*KPRKVG
Trigger: GCCCACCTTCCTGGGCTTCCAAGGAACTTTAGGACC...TTTGAGTCTGGGAGCTGGATTGCCTGCAAATAGTGAAAGCCTGAAACATAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CCA 90 bp GGGACTTCAGTCTGTACGTTTTGTACCAACTCACTGGATCTGGACAGTGGGCAGAGAATTCAAAAGGGTTaGCTGGTAACGAGCCATCTG +
Preference number: 2 (lower is better)
Translates to: GTSVCTFCTNSLDLDSGQRIQKG*LVTSHL
Trigger: CAGATGGCTCGTTACCAGCCAACCCTTTTGAATTCT...CTGCCCACTGTCCAGATCCAGTGAGTTGGTACAAAACGTACAGACTGAAGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CCA 90 bp TGGGCCTTTCAAGATTATTACAGACAACTCCAAGTAGCTAGAGGCCTGGCCTTATTGGAACAATTCGGGTaGCCAGGGGTAAGGATGCTC +
Preference number: 2 (lower is better)
Translates to: WAFQDYYRQLQVARGLALLEQFG*PGVRML
Trigger: GAGCATCCTTACCCCTGGCCACCCGAATTGTTCCAA...TAAGGCCAGGCCTCTAGCTACTTGGAGTTGTCTGTAATAATCTTGAAAGGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR TCA 90 bp CTTCAGATGAACCACTGCAATAAACCCTACTCTCTGCTTGCCTCTAGACTGGGAGTTGCATACAATGTGTaGCTCCAGATTTGGATGGGC +
Preference number: 2 (lower is better)
Translates to: LQMNHCNKPYSLLASRLGVAYNV*LQIWMG
Trigger: GCCCATCCAAATCTGGAGTCACACATTGTATGCAAC...TCCCAGTCTAGAGGCAAGCAGAGAGTAGGGTTTATTGCAGTGGTTCATCTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
3UTR-3UTR TCA 90 bp GATGTAGCCTGCTCAACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGAATCCAGCCTTCAGATaGACCACTGCAATAAACCCT +
Preference number: 2 (lower is better)
Translates to: DVACSTALSSYPGPHLFMNPAFR*TTAINP
Trigger: AGGGTTTATTGCAGTGGTTCATCTGAAGGCTGGATT...CATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGTTGAGCAGGCTACATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
3UTR-3UTR TCA 90 bp CCTTGGGCCTTTCAAGATTATTACAGACAACTCCAAGTAGCTAGAGGCCTGGCCCACTTCCAAGCTGTGTaGCCTTTTAGCAAGTCTCAA +
Preference number: 2 (lower is better)
Translates to: PWAFQDYYRQLQVARGLAHFQAV*PFSKSQ
Trigger: TTGAGACTTGCTAAAAGGTCACACAGCTTGGAAGTG...GGCCAGGCCTCTAGCTACTTGGAGTTGTCTGTAATAATCTTGAAAGGCCCAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR TCA 90 bp CGTGCTGTCCTTGAACATGTCTTCGGTCCTGGGCATTGTGACCCCAAAGTGTTTAAAGAGCAGAGGATTTaGAGAATCACTTCCAAGCTG +
Preference number: 2 (lower is better)
Translates to: RAVLEHVFGPGHCDPKVFKEQRI*RITSKL
Trigger: CAGCTTGGAAGTGATTCTTCAAATCCTCTGCTCTTT...AAACACTTTGGGGTCACAATGCCCAGGACCGAAGACATGTTCAAGGACAGCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR GCA 90 bp TATGCTCTTCAAATGGAATCCAGCCTTCAGATGAACCACTGCAATAAACCCTACGTGCTGCTAGGGAACTaGTCCAGCACCGGTGTAAGA +
Preference number: 2 (lower is better)
Translates to: YALQMESSLQMNHCNKPYVLLGN*SSTGVR
Trigger: TCTTACACCGGTGCTGGAGCAGTTCCCTAGCAGCAC...GTAGGGTTTATTGCAGTGGTTCATCTGAAGGCTGGATTCCATTTGAAGAGCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
3UTR-3UTR GCA 90 bp GATGTAGCCTGCTCAACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGATAAACCCTACTCTCTaGTTGCCTCTAGACTGGGAT +
Preference number: 2 (lower is better)
Translates to: DVACSTALSSYPGPHLFMINPTL*LPLDWD
Trigger: ATCCCAGTCTAGAGGCAAGCAGAGAGTAGGGTTTAT...CATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGTTGAGCAGGCTACATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
3UTR-3UTR GCA 90 bp TGGGCCTTTCAAGATTATTACAGACAACTCCAAGTAGCTAGAGGCCTGGCCTTACCTAGAGATGTAGCCTaGTCAACAGCTCTGAGTTCC +
Preference number: 2 (lower is better)
Translates to: WAFQDYYRQLQVARGLALPRDVA*STALSS
Trigger: GGAACTCAGAGCTGTTGAGCAGGCTACATCTCTAGG...TAAGGCCAGGCCTCTAGCTACTTGGAGTTGTCTGTAATAATCTTGAAAGGCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CCA 90 bp TGTTTCCTCATTTGTCAATTGACTGTAATAACTCTAACCCTGTCCCTCTCAGGGTCAGAGGCTGAAGTCTaGATGACACAGGGCATCCGG +
Preference number: 2 (lower is better)
Translates to: CFLICQLTVITLTLSLSGSEAEV*MTQGIR
Trigger: CCGGATGCCCTGTGTCATCCAGACTTCAGCCTCTGA...CCCTGAGAGGGACAGGGTTAGAGTTATTACAGTCAATTGACAAATGAGGAAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CCA 90 bp GTGGGAGAATACAGGATGGAAAAGCAGACTTCCACGTATTTTCACTTAACTGCACAGACAGGTGAGTCCTaGCACTGGGAAGGGCAAAAG +
Preference number: 2 (lower is better)
Translates to: VGEYRMEKQTSTYFHLTAQTGES*HWEGQK
Trigger: CTTTTGCCCTTCCCAGTGCCAGGACTCACCTGTCTG...TGCAGTTAAGTGAAAATACGTGGAAGTCTGCTTTTCCATCCTGTATTCTCCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CCA 90 bp ACAGCAAGGATATCCAGGGACTATCCATGTGGCCATAGGGAAGCAAGTGCTGTTATACCAAAAACGCTCTaGACAGGTGTGTGTGTCTCT +
Preference number: 2 (lower is better)
Translates to: TARISRDYPCGHREASAVIPKTL*TGVCVS
Trigger: AGAGACACACACACCTGTCCAGAGCGTTTTTGGTAT...AACAGCACTTGCTTCCCTATGGCCACATGGATAGTCCCTGGATATCCTTGCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CCA 90 bp CCTTGGGCCTTTCAAGATTATTACAGACAACTCCAAGTAGCTAGAGGCCTGGCCTGGGAGAATACAGGATaGAAAAGCAGACTTCCACGT +
Preference number: 2 (lower is better)
Translates to: PWAFQDYYRQLQVARGLAWENTG*KSRLPR
Trigger: ACGTGGAAGTCTGCTTTTCCATCCTGTATTCTCCCA...GGCCAGGCCTCTAGCTACTTGGAGTTGTCTGTAATAATCTTGAAAGGCCCAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CAA 90 bp ACTGTGGGCCTGTTCCCTTCCATAACCTGTTTCCTCATTTGTCAATaGACTGTAATAACTCTAACCCTGTCCCTCTCAGGGCGAGTACAT +
Preference number: 2 (lower is better)
Translates to: TVGLFPSITCFLICQ*TVITLTLSLSGRVH
Trigger: ATGTACTCGCCCTGAGAGGGACAGGGTTAGAGTTATTACAGTCAATTGACAAATGAGGAAACAGGTTATGGAAGGGAACAGGCCCACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR TCA 90 bp CCATTATGTTTCAGGCTTTCACTATTTGCAGGCAATCCAGCTCCCAGACTCAAAAACCCAAGGGTTTCCTaGTTTTTCCCTCCCTTAGGG +
Preference number: 2 (lower is better)
Translates to: PLCFRLSLFAGNPAPRLKNPRVS*FFPPLG
Trigger: CCCTAAGGGAGGGAAAAATCAGGAAACCCTTGGGTT...TTTGAGTCTGGGAGCTGGATTGCCTGCAAATAGTGAAAGCCTGAAACATAATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR GCA 90 bp CCATTATGTTTCAGGCTTTCACTATTTGCAGGCAATCCAGCTCCCAGACTCAAATTGTCCTCTCTTGCTTaGCTGCCTTCAATGAGACGG +
Preference number: 2 (lower is better)
Translates to: PLCFRLSLFAGNPAPRLKLSSLA*LPSMRR
Trigger: CCGTCTCATTGAAGGCAGGCAAGCAAGAGAGGACAA...TTTGAGTCTGGGAGCTGGATTGCCTGCAAATAGTGAAAGCCTGAAACATAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CCA 90 bp TCTGTTTATGCTCTTCAAATGGAATCCAGCCTTCAGATGAACCACTGCAATAAATGCTTGCCTCTAGACTaGGATCCCCAGGGACAGGAC +
Preference number: 2 (lower is better)
Translates to: SVYALQMESSLQMNHCNKCLPLD*DPQGQD
Trigger: GTCCTGTCCCTGGGGATCCCAGTCTAGAGGCAAGCA...TTTATTGCAGTGGTTCATCTGAAGGCTGGATTCCATTTGAAGAGCATAAACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
3UTR-3UTR CCA 90 bp CCTTGGGCCTTTCAAGATTATTACAGACAACTCCAAGTAGCTAGAGGCCTGGCCTTTGTGTCTGGGACATaGGAATGTCCTGAACTAATC +
Preference number: 2 (lower is better)
Translates to: PWAFQDYYRQLQVARGLAFVSGT*ECPELI
Trigger: GATTAGTTCAGGACATTCCCATGTCCCAGACACAAA...GGCCAGGCCTCTAGCTACTTGGAGTTGTCTGTAATAATCTTGAAAGGCCCAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CCA 90 bp TGTTTCCTCATTTGTCAATTGACTGTAATAACTCTAACCCTGTCCCTCTCAGGGCTGCCAGCACCCACCTaGAATGTGGTTCCTTCACTT +
Preference number: 2 (lower is better)
Translates to: CFLICQLTVITLTLSLSGLPAPT*NVVPSL
Trigger: AAGTGAAGGAACCACATTCCAGGTGGGTGCTGGCAG...CCCTGAGAGGGACAGGGTTAGAGTTATTACAGTCAATTGACAAATGAGGAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CCA 90 bp CCATTATGTTTCAGGCTTTCACTATTTGCAGGCAATCCAGCTCCCAGACTCAAACGCCTTTGGAGTCCGTaGAGGAAAAGAGCAGAAACA +
Preference number: 2 (lower is better)
Translates to: PLCFRLSLFAGNPAPRLKRLWSP*RKRAET
Trigger: TGTTTCTGCTCTTTTCCTCCACGGACTCCAAAGGCG...TTTGAGTCTGGGAGCTGGATTGCCTGCAAATAGTGAAAGCCTGAAACATAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CCA 90 bp TGGGCCTTTCAAGATTATTACAGACAACTCCAAGTAGCTAGAGGCCTGGCCTTAGCTCATTACAGGTCCTaGCCCAAAGCAGTTCATACA +
Preference number: 2 (lower is better)
Translates to: WAFQDYYRQLQVARGLALAHYRS*PKAVHT
Trigger: TGTATGAACTGCTTTGGGCCAGGACCTGTAATGAGC...TAAGGCCAGGCCTCTAGCTACTTGGAGTTGTCTGTAATAATCTTGAAAGGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR TCA 90 bp TGGGCCTTTCAAGATTATTACAGACAACTCCAAGTAGCTAGAGGCCTGGCCTTACTGTTCTGTGAACTGTaGGGTCCAGCTGTTAGTTTT +
Preference number: 2 (lower is better)
Translates to: WAFQDYYRQLQVARGLALLFCEL*GPAVSF
Trigger: AAAACTAACAGCTGGACCTCACAGTTCACAGAACAG...TAAGGCCAGGCCTCTAGCTACTTGGAGTTGTCTGTAATAATCTTGAAAGGCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR TCA 90 bp TGGGCCTTTCAAGATTATTACAGACAACTCCAAGTAGCTAGAGGCCTGGCCTTACATGTGATTCCTTTCTaGAGGCCATCAGAACAAAGC +
Preference number: 2 (lower is better)
Translates to: WAFQDYYRQLQVARGLALHVIPF*RPSEQS
Trigger: GCTTTGTTCTGATGGCCTTCAGAAAGGAATCACATG...TAAGGCCAGGCCTCTAGCTACTTGGAGTTGTCTGTAATAATCTTGAAAGGCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR GCA 90 bp CCCAGGTTCTCAGCCTGGGGTATTAAGCTGCTAATAACACGCCTACATACTCAGGACCACATCTGTTTATaGTCTTCAAATGGAATCCAG +
Preference number: 2 (lower is better)
Translates to: PRFSAWGIKLLITRLHTQDHICL*SSNGIQ
Trigger: CTGGATTCCATTTGAAGAGCATAAACAGATGTGGTC...CTGAGTATGTAGGCGTGTTATTAGCAGCTTAATACCCCAGGCTGAGAACCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
3UTR-3UTR GCA 90 bp TGGGCCTTTCAAGATTATTACAGACAACTCCAAGTAGCTAGAGGCCTGGCCTTACAGTTAACATCACTGTaGAAATCAGAAGGTCCAGGG +
Preference number: 2 (lower is better)
Translates to: WAFQDYYRQLQVARGLALQLTSL*KSEGPG
Trigger: CCCTGGACCTTCTGATTTGCACAGTGATGTTAACTG...TAAGGCCAGGCCTCTAGCTACTTGGAGTTGTCTGTAATAATCTTGAAAGGCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CCA 90 bp TGTTTCCTCATTTGTCAATTGACTGTAATAACTCTAACCCTGTCCCTCTCAGGGTCCCTTAGGGAGACATaGGAGGTTGGGGTAAGGATA +
Preference number: 2 (lower is better)
Translates to: CFLICQLTVITLTLSLSGSLRET*EVGVRI
Trigger: TATCCTTACCCCAACCTCCCATGTCTCCCTAAGGGA...CCCTGAGAGGGACAGGGTTAGAGTTATTACAGTCAATTGACAAATGAGGAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CAA 90 bp GCTAATAACACGCCTACATACTCAGGTGGTTTTGTTCTTGGTCTGTaGCAATGGTTCTCAGGAGACATTTCATTTGTGTCTGGGACATGG +
Preference number: 2 (lower is better)
Translates to: ANNTPTYSGGFVLGL*QWFSGDISFVSGTW
Trigger: CCATGTCCCAGACACAAATGAAATGTCTCCTGAGAACCATTGCAACAGACCAAGAACAAAACCACCTGAGTATGTAGGCGTGTTATTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
3UTR-3UTR GCA 90 bp ACAGCAAGGATATCCAGGGACTATCCATGTGGCCATAGGGAAGCAAGTGCTGTTAATGTCAAAGTACTTTaGATACCAAAAACGCTCTGG +
Preference number: 2 (lower is better)
Translates to: TARISRDYPCGHREASAVNVKVL*IPKTLW
Trigger: CCAGAGCGTTTTTGGTATGCAAAGTACTTTGACATT...AACAGCACTTGCTTCCCTATGGCCACATGGATAGTCCCTGGATATCCTTGCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR TCA 90 bp TGTTTCCTCATTTGTCAATTGACTGTAATAACTCTAACCCTGTCCCTCTCAGGGCACCGGTGTAAGACTTaGGTAGTTGCATACAATGTG +
Preference number: 2 (lower is better)
Translates to: CFLICQLTVITLTLSLSGHRCKT*VVAYNV
Trigger: CACATTGTATGCAACTACTCAAGTCTTACACCGGTG...CCCTGAGAGGGACAGGGTTAGAGTTATTACAGTCAATTGACAAATGAGGAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR TCA 90 bp TCAGGAGACATTTCATTTGTGTCTGGGACATGGGAATGTCCTGAACTAATCTTGAATCCAGCCTTCAGATaGACCACTGCAATAAACCCT +
Preference number: 2 (lower is better)
Translates to: SGDISFVSGTWECPELILNPAFR*TTAINP
Trigger: AGGGTTTATTGCAGTGGTTCATCTGAAGGCTGGATT...CAAGATTAGTTCAGGACATTCCCATGTCCCAGACACAAATGAAATGTCTCCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
3UTR-3UTR TCA 90 bp TGGGCCTTTCAAGATTATTACAGACAACTCCAAGTAGCTAGAGGCCTGGCCTTATCTATTGTTTTAAAGTaGAACCTCATCAGCACCCAG +
Preference number: 2 (lower is better)
Translates to: WAFQDYYRQLQVARGLALSIVLK*NLISTQ
Trigger: CTGGGTGCTGATGAGGTTTCACTTTAAAACAATAGA...TAAGGCCAGGCCTCTAGCTACTTGGAGTTGTCTGTAATAATCTTGAAAGGCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR GCA 90 bp CCATTATGTTTCAGGCTTTCACTATTTGCAGGCAATCCAGCTCCCAGACTCAAACTTCAGATGAACCACTaGAATAAACCCTACTCTCTG +
Preference number: 2 (lower is better)
Translates to: PLCFRLSLFAGNPAPRLKLQMNH*NKPYSL
Trigger: CAGAGAGTAGGGTTTATTGCAGTGGTTCATCTGAAG...TTTGAGTCTGGGAGCTGGATTGCCTGCAAATAGTGAAAGCCTGAAACATAATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR GCA 90 bp CCATTATGTTTCAGGCTTTCACTATTTGCAGGCAATCCAGCTCCCAGACTCAAAACCAGGTATGGGCGCTaGCGACTTAATTTTTACAAA +
Preference number: 2 (lower is better)
Translates to: PLCFRLSLFAGNPAPRLKTRYGR*RLNFYK
Trigger: TTTGTAAAAATTAAGTCGGCAGCGCCCATACCTGGT...TTTGAGTCTGGGAGCTGGATTGCCTGCAAATAGTGAAAGCCTGAAACATAATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CAA 90 bp GGCAAGGCCATGGGGCTTTCCAATCTTTACACTCCGGACTGTGTTTaGAAAACACCTATAAATTCTTTGATCAAACTACTTGGAAGACAC +
Preference number: 2 (lower is better)
Translates to: GKAMGLSNLYTPDCV*KTPINSLIKLLGRH
Trigger: GTGTCTTCCAAGTAGTTTGATCAAAGAATTTATAGGTGTTTTCAAAACACAGTCCGGAGTGTAAAGATTGGAAAGCCCCATGGCCTTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CCA 90 bp GTGGGAGAATACAGGATGGAAAAGCAGACTTCCACGTATTTTCACTTAACTGCATTTGTGTCTGGGACATaGGAATGTCCTGAACTAATC +
Preference number: 2 (lower is better)
Translates to: VGEYRMEKQTSTYFHLTAFVSGT*ECPELI
Trigger: GATTAGTTCAGGACATTCCCATGTCCCAGACACAAA...TGCAGTTAAGTGAAAATACGTGGAAGTCTGCTTTTCCATCCTGTATTCTCCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CAA 90 bp GTCTCTGCTAAATATTCAGGAAAGAGGATATACATTTTAGGGTCATaGCCAGGTAAGAAAGAACAGCAACTGTCCTATCTCATGAGGAAG +
Preference number: 2 (lower is better)
Translates to: VSAKYSGKRIYILGS*PGKKEQQLSYLMRK
Trigger: CTTCCTCATGAGATAGGACAGTTGCTGTTCTTTCTTACCTGGCAATGACCCTAAAATGTATATCCTCTTTCCTGAATATTTAGCAGAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CCA 72 bp GGGTGCCGGAGGCTGCTGCTGGGCAATCCAGGCTCCTaGCTGAGACTAGCAGGGACCTCCTCGTCCCAGGGG +
Preference number: 3 (lower is better)
Translates to: GCRRLLLGNPGS*LRLAGTSSSQG
Trigger: CCCCTGGGACGAGGAGGTCCCTGCTAGTCTCAGCCAGGAGCCTGGATTGCCCAGCAGCAGCCTCCGGCACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR GCA 72 bp CTCTGCGGGTGGGTCCCAACTGGCCCACTCTACTACTaGCCCTCTCTGGATTCCCAAGCTTGGCAAGCAGCG +
Preference number: 3 (lower is better)
Translates to: LCGWVPTGPLYY*PSLDSQAWQAA
Trigger: CGCTGCTTGCCAAGCTTGGGAATCCAGAGAGGGGCAGTAGTAGAGTGGGCCAGTTGGGACCCACCCGCAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR GCA 72 bp CGCCCAAGGGACTCACTGGCCCAGGACAGTCCTCTGTaGCTCCCTCCCCAAGAACCACTCAGTCTAGTCACC +
Preference number: 3 (lower is better)
Translates to: RPRDSLAQDSPL*LPPQEPLSLVT
Trigger: GGTGACTAGACTGAGTGGTTCTTGGGGAGGGAGGCACAGAGGACTGTCCTGGGCCAGTGAGTCCCTTGGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR GCA 72 bp AGTAAAGGACAAACCCTGCAGCCCCCTTGGCATGCCTaGCTGTGCGCTCAGAGGCTCCGGTGTGGAATCCCA +
Preference number: 3 (lower is better)
Translates to: SKGQTLQPPWHA*LCAQRLRCGIP
Trigger: TGGGATTCCACACCGGAGCCTCTGAGCGCACAGGCAGGCATGCCAAGGGGGCTGCAGGGTTTGTCCTTTACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CCA 72 bp GGGCAGATAAGTAAAGGACAAACCCTGCAGCCCCCTTaGCATGCCTGCCTGTGCGCTCAGAGGCTCCGGTGT +
Preference number: 3 (lower is better)
Translates to: GQISKGQTLQPP*HACLCAQRLRC
Trigger: ACACCGGAGCCTCTGAGCGCACAGGCAGGCATGCCAAGGGGGCTGCAGGGTTTGTCCTTTACTTATCTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CCA 72 bp TTAGCATCAACTTGGGGAGACGCCCAAGGGACTCACTaGCCCAGGACAGTCCTCTGTGCCTCCCTCCCCAAG +
Preference number: 3 (lower is better)
Translates to: LASTWGDAQGTH*PRTVLCASLPK
Trigger: CTTGGGGAGGGAGGCACAGAGGACTGTCCTGGGCCAGTGAGTCCCTTGGGCGTCTCCCCAAGTTGATGCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR GCA 72 bp AATTTCTGTTCCTGCCATCCGCCCCCATGTAGCCTCTaGCCAGTCTTCAACCCCCGCCTTTGGAGTCCGTGG +
Preference number: 3 (lower is better)
Translates to: NFCSCHPPPCSL*PVFNPRLWSPW
Trigger: CCACGGACTCCAAAGGCGGGGGTTGAAGACTGGGCAGAGGCTACATGGGGGCGGATGGCAGGAACAGAAATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CCA 72 bp TCCTTTCTCCTCTCTGTGGTTCCACCCCAGCCCACATaGAGGCAGCAGGGTTCTGGGAAGCCTAGCGGATAC +
Preference number: 3 (lower is better)
Translates to: SFLLSVVPPQPT*RQQGSGKPSGY
Trigger: GTATCCGCTAGGCTTCCCAGAACCCTGCTGCCTCCATGTGGGCTGGGGTGGAACCACAGAGAGGAGAAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CCA 72 bp GGGTGGCCAGGGGTAAGGATGCTCAGAGTCTGGTTCTaGTCCTCACCCATGGGAAAAGCAAGCCCAGGGACT +
Preference number: 3 (lower is better)
Translates to: GWPGVRMLRVWF*SSPMGKASPGT
Trigger: AGTCCCTGGGCTTGCTTTTCCCATGGGTGAGGACCAGAACCAGACTCTGAGCATCCTTACCCCTGGCCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CCA 72 bp TGGCGTGTTTCTTCAGCTCTGCGGGTGGGTCCCAACTaGCCCACTCTACTACTGCCCCTCTCTGGATTCCCA +
Preference number: 3 (lower is better)
Translates to: WRVSSALRVGPN*PTLLLPLSGFP
Trigger: TGGGAATCCAGAGAGGGGCAGTAGTAGAGTGGGCCAGTTGGGACCCACCCGCAGAGCTGAAGAAACACGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CCA 72 bp CTGACTCTCTTAGGCCTGAGGAGAAAGGCTGGGGTCTaGAGATGCTGGTCTTGCTGGGGTCAGGCCCAAAGC +
Preference number: 3 (lower is better)
Translates to: LTLLGLRRKAGV*RCWSCWGQAQS
Trigger: GCTTTGGGCCTGACCCCAGCAAGACCAGCATCTCCAGACCCCAGCCTTTCTCCTCAGGCCTAAGAGAGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR GCA 72 bp CTTCCAAGGCCTCGGGATGCTGGGATCCTACCACCCTaGAGCCGCTTGGCAGGTCTAAGGACAAAATCACCT +
Preference number: 3 (lower is better)
Translates to: LPRPRDAGILPP*SRLAGLRTKSP
Trigger: AGGTGATTTTGTCCTTAGACCTGCCAAGCGGCTGCAGGGTGGTAGGATCCCAGCATCCCGAGGCCTTGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR GCA 72 bp ATGAGGAGGAGAGAGGGGTTTGCATCCTGGGGCCAGTaGTGTAGCTCACTGTCAGGCGGCTACATCCCTTGT +
Preference number: 3 (lower is better)
Translates to: MRRREGFASWGQ*CSSLSGGYIPC
Trigger: ACAAGGGATGTAGCCGCCTGACAGTGAGCTACAGCACTGGCCCCAGGATGCAAACCCCTCTCTCCTCCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CCA 72 bp CCATGTAGCCTCTGCCCAGTCTTCAACCCCCGCCTTTaGAGTCCGTGGAGGAAAAGAGCAGAAACAGGAGCC +
Preference number: 3 (lower is better)
Translates to: PCSLCPVFNPRL*SPWRKRAETGA
Trigger: GGCTCCTGTTTCTGCTCTTTTCCTCCACGGACTCCAAAGGCGGGGGTTGAAGACTGGGCAGAGGCTACATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CCA 72 bp CCTCTCCTTTTCGGCCAGTCCACCTGCTCCTTCTCCTaGAGGTGGAGTCAGGTACAGGACGGAAGTTCCAGA +
Preference number: 3 (lower is better)
Translates to: PLLFGQSTCSFS*RWSQVQDGSSR
Trigger: TCTGGAACTTCCGTCCTGTACCTGACTCCACCTCCAGGAGAAGGAGCAGGTGGACTGGCCGAAAAGGAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CCA 72 bp CTCAGAGGCTCCGGTGTGGAATCCCATCAGTTAGTCTaGCGTGTTTCTTCAGCTCTGCGGGTGGGTCCCAAC +
Preference number: 3 (lower is better)
Translates to: LRGSGVESHQLV*RVSSALRVGPN
Trigger: GTTGGGACCCACCCGCAGAGCTGAAGAAACACGCCAGACTAACTGATGGGATTCCACACCGGAGCCTCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CAA 90 bp CTTGCTGGGGTCAGGCCCAAAGCTGATCTCACCCATTTGATTCCTATGGGCCGGAACCCTACTCTCTGCTaGCCTCTAGACTGGGATCCC +
Preference number: 3 (lower is better)
Translates to: LAGVRPKADLTHLIPMGRNPTLC*PLDWDP
Trigger: GGGATCCCAGTCTAGAGGCAAGCAGAGAGTAGGGTT...CCGGCCCATAGGAATCAAATGGGTGAGATCAGCTTTGGGCCTGACCCCAGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CAA 90 bp CTTGCTGGGGTCAGGCCCAAAGCTGATCTCACCCATTTGATTCCTATGGGCCGGCCAGGGCCAGATGCTTaGGCCAGAGACCTTTCAAAC +
Preference number: 3 (lower is better)
Translates to: LAGVRPKADLTHLIPMGRPGPDA*ARDLSN
Trigger: GTTTGAAAGGTCTCTGGCCAAAGCATCTGGCCCTGG...CCGGCCCATAGGAATCAAATGGGTGAGATCAGCTTTGGGCCTGACCCCAGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CAA 90 bp CGTGCTGTCCTTGAACATGTCTTCGGTCCTGGGCATTGTGACCCCAAAGTGTTTCCCCTCCCTCCATGCTaGCCAAGAGACCCAGCAGGT +
Preference number: 3 (lower is better)
Translates to: RAVLEHVFGPGHCDPKVFPLPPC*PRDPAG
Trigger: ACCTGCTGGGTCTCTTGGCAAGCATGGAGGGAGGGG...AAACACTTTGGGGTCACAATGCCCAGGACCGAAGACATGTTCAAGGACAGCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR TCA 72 bp GCACCCACCTGGAATGTGGTTCCTTCACTTGGGCCATaGATGGCACAGGTAACCAAGAGCTTGGCCTGCCTG +
Preference number: 3 (lower is better)
Translates to: APTWNVVPSLGP*MAQVTKSLACL
Trigger: CAGGCAGGCCAAGCTCTTGGTTACCTGTGCCATTCATGGCCCAAGTGAAGGAACCACATTCCAGGTGGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR TCA 72 bp CTTACCAGTAACTGTGCCCATCCTACCAGAGGCACATaGCTGTCCCCGCTCTCCTGGGCTCAGTCCTTTTGC +
Preference number: 3 (lower is better)
Translates to: LTSNCAHPTRGT*LSPLSWAQSFC
Trigger: GCAAAAGGACTGAGCCCAGGAGAGCGGGGACAGTCATGTGCCTCTGGTAGGATGGGCACAGTTACTGGTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR TCA 72 bp ACAGCATGCACCACAGAAGATATCCACTGGAGAGACTaGGGGACTGGGACCCAAGTCTGGCTTAGGCAGGGC +
Preference number: 3 (lower is better)
Translates to: TACTTEDIHWRD*GTGTQVWLRQG
Trigger: GCCCTGCCTAAGCCAGACTTGGGTCCCAGTCCCTCAGTCTCTCCAGTGGATATCTTCTGTGGTGCATGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CCA 72 bp GCACAGAGCACAGATGCTTCAGTACGTGAGCCTGTGTaGGGATCAGATGGAGGGGAACGAGACAGCAGACAG +
Preference number: 3 (lower is better)
Translates to: AQSTDASVREPV*GSDGGERDSRQ
Trigger: CTGTCTGCTGTCTCGTTCCCCTCCATCTGATCCCCACACAGGCTCACGTACTGAAGCATCTGTGCTCTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CCA 72 bp CCTGGGCTCAGTCCTTTTGCAGTGACTCCCCAAGCTTaGCTAGGCTTGTGGATCTCCATCACAGCAAGAGGC +
Preference number: 3 (lower is better)
Translates to: PGLSPFAVTPQA*LGLWISITARG
Trigger: GCCTCTTGCTGTGATGGAGATCCACAAGCCTAGCCAAGCTTGGGGAGTCACTGCAAAAGGACTGAGCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CCA 72 bp GCCTCTGGGTCCCTCCCCAGGGCTCATTACAGGTCCTaGCCCAAAGCAGTTCATACAAATCTGCTCAGCTCA +
Preference number: 3 (lower is better)
Translates to: ASGSLPRAHYRS*PKAVHTNLLSS
Trigger: TGAGCTGAGCAGATTTGTATGAACTGCTTTGGGCCAGGACCTGTAATGAGCCCTGGGGAGGGACCCAGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CCA 72 bp CAATTCGGGTGGCCAGGGGTAAGGATGCTCAGAGTCTaGTTCTGGTCCTCACCCATGGGAAAAGCAAGCCCA +
Preference number: 3 (lower is better)
Translates to: QFGWPGVRMLRV*FWSSPMGKASP
Trigger: TGGGCTTGCTTTTCCCATGGGTGAGGACCAGAACCAGACTCTGAGCATCCTTACCCCTGGCCACCCGAATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CCA 72 bp TGGCAAGCAGCGGGGGCCGCACAGCCAGTAGTGATGTaGGAGAATACAGGATGGAAAAGCAGACTTCCACGT +
Preference number: 3 (lower is better)
Translates to: WQAAGAAQPVVM*ENTGWKSRLPR
Trigger: ACGTGGAAGTCTGCTTTTCCATCCTGTATTCTCCCACATCACTACTGGCTGTGCGGCCCCCGCTGCTTGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CAA 90 bp CTTGCTGGGGTCAGGCCCAAAGCTGATCTCACCCATTTGATTCCTATGGGCCGGCTTGTCCTCTCTTGCTaGCCTGCCTTCAATGAGACG +
Preference number: 3 (lower is better)
Translates to: LAGVRPKADLTHLIPMGRLVLSC*PAFNET
Trigger: CGTCTCATTGAAGGCAGGCAAGCAAGAGAGGACAAG...CCGGCCCATAGGAATCAAATGGGTGAGATCAGCTTTGGGCCTGACCCCAGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CCA 72 bp TGGGAACGGGGTACCTCAAACTTGGAACAATTCGGGTaGCCAGGGGTAAGGATGCTCAGAGTCTGGTTCTGG +
Preference number: 3 (lower is better)
Translates to: WERGTSNLEQFG*PGVRMLRVWFW
Trigger: CCAGAACCAGACTCTGAGCATCCTTACCCCTGGCCACCCGAATTGTTCCAAGTTTGAGGTACCCCGTTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CAA 90 bp CCAAGAGCTTGGCCTGCCTGCAAGCTCTATGGTCAGACAGGTGAGTCCTGGCACTTCCGTTGTCTCTTCTaGCAAATAGAGGTGGTGCTG +
Preference number: 3 (lower is better)
Translates to: PRAWPACKLYGQTGESWHFRCLF*QIEVVL
Trigger: CAGCACCACCTCTATTTGCAAGAAGAGACAACGGAA...GTGCCAGGACTCACCTGTCTGACCATAGAGCTTGCAGGCAGGCCAAGCTCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR TCA 72 bp TGGAGATGCTGGTCTTGCTGGGGTCAGGCCCAAAGCTaGTCTCACCCATTTGATTCCTATGGGCCGGTACTT +
Preference number: 3 (lower is better)
Translates to: WRCWSCWGQAQS*SHPFDSYGPVL
Trigger: AAGTACCGGCCCATAGGAATCAAATGGGTGAGATCAGCTTTGGGCCTGACCCCAGCAAGACCAGCATCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR TCA 72 bp GAGCTTGAGTCACACCATAGATCCAGACTATCTGGCTaGCCCGAGGAGAAGGTCTCTGGGACAGTCTCCTCT +
Preference number: 3 (lower is better)
Translates to: ELESHHRSRLSG*PEEKVSGTVSS
Trigger: AGAGGAGACTGTCCCAGAGACCTTCTCCTCGGGTCAGCCAGATAGTCTGGATCTATGGTGTGACTCAAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CCA 72 bp CTGTACGTTTTGTACCAACTCACTGGATCTGGACAGTaGGCAGGCTCTCAGGGATTAGGAAGCCAGGTGTGC +
Preference number: 3 (lower is better)
Translates to: LYVLYQLTGSGQ*AGSQGLGSQVC
Trigger: GCACACCTGGCTTCCTAATCCCTGAGAGCCTGCCCACTGTCCAGATCCAGTGAGTTGGTACAAAACGTACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CCA 72 bp GTCCCAACTCCTGTGTGCCTCGGTTGGCCTTTGGGTTaGACTCAACAGCATGCACCACAGAAGATATCCACT +
Preference number: 3 (lower is better)
Translates to: VPTPVCLGWPLG*TQQHAPQKIST
Trigger: AGTGGATATCTTCTGTGGTGCATGCTGTTGAGTCCAACCCAAAGGCCAACCGAGGCACACAGGAGTTGGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CCA 72 bp AGCCAGTCCCAACTCCTGTGTGCCTCGGTTGGCCTTTaGGTTGGACTCAACAGCATGCACCACAGAAGATAT +
Preference number: 3 (lower is better)
Translates to: SQSQLLCASVGL*VGLNSMHHRRY
Trigger: ATATCTTCTGTGGTGCATGCTGTTGAGTCCAACCCAAAGGCCAACCGAGGCACACAGGAGTTGGGACTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CAA 90 bp ACAGCAAGGATATCCAGGGACTATCCATGTGGCCATAGGGAAGCAAGTGCTGTTTCCTGTGTGCCTCGGTaGGCCTTTGGGTTGGACTCA +
Preference number: 3 (lower is better)
Translates to: TARISRDYPCGHREASAVSCVPR*AFGLDS
Trigger: TGAGTCCAACCCAAAGGCCAACCGAGGCACACAGGA...AACAGCACTTGCTTCCCTATGGCCACATGGATAGTCCCTGGATATCCTTGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CCA 72 bp CAGGGACTTCAGTCTGTACGTTTTGTACCAACTCACTaGATCTGGACAGTGGGCAGGCTCTCAGGGATTAGG +
Preference number: 3 (lower is better)
Translates to: QGLQSVRFVPTH*IWTVGRLSGIR
Trigger: CCTAATCCCTGAGAGCCTGCCCACTGTCCAGATCCAGTGAGTTGGTACAAAACGTACAGACTGAAGTCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CCA 72 bp TCTGAGCCTCGCTTAGTCAGTGCCTCGCTGGGAACCTaGATGAGTCCTATCTGTATGAGGAGCCAAAACTTG +
Preference number: 3 (lower is better)
Translates to: SEPRLVSASLGT*MSPICMRSQNL
Trigger: CAAGTTTTGGCTCCTCATACAGATAGGACTCATCCAGGTTCCCAGCGAGGCACTGACTAAGCGAGGCTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CAA 90 bp CAGGGCTGGCCATGGAATGTTGAAGCTGGCCTGCCAGGAATTTTGAAGGCTGGGACCCTTGCACTTCCGTaGTCTCTTCTTGCAAATAGA +
Preference number: 3 (lower is better)
Translates to: QGWPWNVEAGLPGILKAGTLALP*SLLANR
Trigger: TCTATTTGCAAGAAGAGACAACGGAAGTGCAAGGGT...CCCAGCCTTCAAAATTCCTGGCAGGCCAGCTTCAACATTCCATGGCCAGCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CAA 90 bp ACAGCAAGGATATCCAGGGACTATCCATGTGGCCATAGGGAAGCAAGTGCTGTTCGGGGTACCTCAAACTaGGAACAATTCGGGTGGCCA +
Preference number: 3 (lower is better)
Translates to: TARISRDYPCGHREASAVRGTSN*EQFGWP
Trigger: TGGCCACCCGAATTGTTCCAAGTTTGAGGTACCCCG...AACAGCACTTGCTTCCCTATGGCCACATGGATAGTCCCTGGATATCCTTGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CAA 90 bp ACTTGGGCCATGAATGGCACAGGTAACCAAGAGCTTGGCCTGCCTGCAAGCTCTACCCTTGCACTTCCGTaGTCTCTTCTTGCAAATAGA +
Preference number: 3 (lower is better)
Translates to: TWAMNGTGNQELGLPASSTLALP*SLLANR
Trigger: TCTATTTGCAAGAAGAGACAACGGAAGTGCAAGGGT...AGAGCTTGCAGGCAGGCCAAGCTCTTGGTTACCTGTGCCATTCATGGCCCAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CAA 90 bp CTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCTTCAAATGGAATCCAGCCAACCCTACTCTCTGCTaGCCTCTAGACTGGGATCCC +
Preference number: 3 (lower is better)
Translates to: LSSYPGPHLFMLFKWNPANPTLC*PLDWDP
Trigger: GGGATCCCAGTCTAGAGGCAAGCAGAGAGTAGGGTT...GGCTGGATTCCATTTGAAGAGCATAAACAGATGTGGTCCAGGGTAGGAACTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
3UTR-3UTR CAA 90 bp CTTGCTGGGGTCAGGCCCAAAGCTGATCTCACCCATTTGATTCCTATGGGCCGGGAAAGAGCAGAGGATTaGAAGAATCACTTCCAAGCT +
Preference number: 3 (lower is better)
Translates to: LAGVRPKADLTHLIPMGRERAED*KNHFQA
Trigger: AGCTTGGAAGTGATTCTTCAAATCCTCTGCTCTTTC...CCGGCCCATAGGAATCAAATGGGTGAGATCAGCTTTGGGCCTGACCCCAGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CAA 90 bp GTGGGAGAATACAGGATGGAAAAGCAGACTTCCACGTATTTTCACTTAACTGCACCCCTCCCTCCATGCTaGCCAAGAGACCCAGCAGGT +
Preference number: 3 (lower is better)
Translates to: VGEYRMEKQTSTYFHLTAPLPPC*PRDPAG
Trigger: ACCTGCTGGGTCTCTTGGCAAGCATGGAGGGAGGGG...TGCAGTTAAGTGAAAATACGTGGAAGTCTGCTTTTCCATCCTGTATTCTCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR TCA 72 bp TACATCCCTTGTCCTCTCTTGCTTGCCTGCCTTCAATaGGACGGCCCTTCCAGCTCTGACTTTTTGTCTAGC +
Preference number: 3 (lower is better)
Translates to: YIPCPLLLACLQ*DGPSSSDFLSS
Trigger: GCTAGACAAAAAGTCAGAGCTGGAAGGGCCGTCTCATTGAAGGCAGGCAAGCAAGAGAGGACAAGGGATGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR TCA 72 bp CACAGAACAAAGCTGAGGAATTTGATATGGAAGCTCTaGGCCTCGCTTAGTCAGTGCCTCGCTGGGAACCTG +
Preference number: 3 (lower is better)
Translates to: HRTKLRNLIWKL*ASLSQCLAGNL
Trigger: CAGGTTCCCAGCGAGGCACTGACTAAGCGAGGCTCAGAGCTTCCATATCAAATTCCTCAGCTTTGTTCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR TCA 72 bp TTGCTGGGGTCAGGCCCAAAGCTGATCTCACCCATTTaGTTCCTATGGGCCGGTACTTTGCAAAGCTGTTAC +
Preference number: 3 (lower is better)
Translates to: LLGSGPKLISPI*FLWAGTLQSCY
Trigger: GTAACAGCTTTGCAAAGTACCGGCCCATAGGAATCAAATGGGTGAGATCAGCTTTGGGCCTGACCCCAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CCA 72 bp CTTCAGTCTGTACGTTTTGTACCAACTCACTGGATCTaGACAGTGGGCAGGCTCTCAGGGATTAGGAAGCCA +
Preference number: 3 (lower is better)
Translates to: LQSVRFVPTHWI*TVGRLSGIRKP
Trigger: TGGCTTCCTAATCCCTGAGAGCCTGCCCACTGTCCAGATCCAGTGAGTTGGTACAAAACGTACAGACTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CAA 90 bp CTTTTCCTTCACTATCCTCACCTTCAGAGCTGCCAGCACCCACCTGGAATGTGGCAGGAGACATTTCATTaGTGTCTGGGACATGGGAAT +
Preference number: 3 (lower is better)
Translates to: LFLHYPHLQSCQHPPGMWQETFH*CLGHGN
Trigger: ATTCCCATGTCCCAGACACAAATGAAATGTCTCCTG...CCACATTCCAGGTGGGTGCTGGCAGCTCTGAAGGTGAGGATAGTGAAGGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CAA 90 bp GGGACTTCAGTCTGTACGTTTTGTACCAACTCACTGGATCTGGACAGTGGGCAGGACTTTTTGTCTAGCTaGACCACCGTGCCATCTAGA +
Preference number: 3 (lower is better)
Translates to: GTSVCTFCTNSLDLDSGQDFLSS*TTVPSR
Trigger: TCTAGATGGCACGGTGGTCAAGCTAGACAAAAAGTC...CTGCCCACTGTCCAGATCCAGTGAGTTGGTACAAAACGTACAGACTGAAGTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR TCA 72 bp AATAACTCTAACCCTGTCCCTCTCAGGGCGAGTACATaGAAGGCCGTGAAGTGCTTTGACCTCTGTGATGCA +
Preference number: 3 (lower is better)
Translates to: NNSNPVPLRAST*KAVKCFDLCDA
Trigger: TGCATCACAGAGGTCAAAGCACTTCACGGCCTTTCATGTACTCGCCCTGAGAGGGACAGGGTTAGAGTTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR TCA 72 bp GAGACGGCCCTTCCAGCTCTGACTTTTTGTCTAGCTTaGCCACCGTGCCATCTAGAATCTTTGGAGGTATCT +
Preference number: 3 (lower is better)
Translates to: ETALPALTFCLA*PPCHLESLEVS
Trigger: AGATACCTCCAAAGATTCTAGATGGCACGGTGGTCAAGCTAGACAAAAAGTCAGAGCTGGAAGGGCCGTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR GCA 72 bp CCCAGAGACCATTCCAGACTCACCAGGTATGGGCGCTaGCGACTTAATTTTTACAAAACCAAGCCAATCCGT +
Preference number: 3 (lower is better)
Translates to: PRDHSRLTRYGR*RLNFYKTKPIR
Trigger: ACGGATTGGCTTGGTTTTGTAAAAATTAAGTCGGCAGCGCCCATACCTGGTGAGTCTGGAATGGTCTCTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CCA 72 bp GAGGGGAACGAGACAGCAGACAGCCTGGGATTCGAGTaGCTCTGTCACTTATTAGCAAGTCACTTGACTTTT +
Preference number: 3 (lower is better)
Translates to: EGNETADSLGFE*LCHLLASHLTF
Trigger: AAAAGTCAAGTGACTTGCTAATAAGTGACAGAGCCACTCGAATCCCAGGCTGTCTGCTGTCTCGTTCCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CAA 90 bp TGGGCCTTTCAAGATTATTACAGACAACTCCAAGTAGCTAGAGGCCTGGCCTTAATGTGGTTCCTTCACTaGGGCCATGAATGGCACAGG +
Preference number: 3 (lower is better)
Translates to: WAFQDYYRQLQVARGLALMWFLH*GHEWHR
Trigger: CCTGTGCCATTCATGGCCCAAGTGAAGGAACCACAT...TAAGGCCAGGCCTCTAGCTACTTGGAGTTGTCTGTAATAATCTTGAAAGGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR TCA 72 bp CAGCCGCTTGGCAGGTCTAAGGACAAAATCACCTTTTaGGGAAGTGCCAGGTCAGTTAACATCACTGTGCAA +
Preference number: 3 (lower is better)
Translates to: QPLGRSKDKITF*GSARSVNITVQ
Trigger: TTGCACAGTGATGTTAACTGACCTGGCACTTCCTCAAAAGGTGATTTTGTCCTTAGACCTGCCAAGCGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CCA 72 bp GAAGCTGGCCTGCCAGGAATTTTGAAGGCTGGGTCCTaGAACCATATAATGCCTAATTTCAGAAACGAGGAG +
Preference number: 3 (lower is better)
Translates to: EAGLPGILKAGS*NHIMPNFRNEE
Trigger: CTCCTCGTTTCTGAAATTAGGCATTATATGGTTCCAGGACCCAGCCTTCAAAATTCCTGGCAGGCCAGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CAA 90 bp CCTTGGGCCTTTCAAGATTATTACAGACAACTCCAAGTAGCTAGAGGCCTGGCCCAGGAGACATTTCATTaGTGTCTGGGACATGGGAAT +
Preference number: 3 (lower is better)
Translates to: PWAFQDYYRQLQVARGLAQETFH*CLGHGN
Trigger: ATTCCCATGTCCCAGACACAAATGAAATGTCTCCTG...GGCCAGGCCTCTAGCTACTTGGAGTTGTCTGTAATAATCTTGAAAGGCCCAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CAA 90 bp CCTTGGGCCTTTCAAGATTATTACAGACAACTCCAAGTAGCTAGAGGCCTGGCCAAGAATTCAAAAGGGTaGGCTGGTAACGAGCCATCT +
Preference number: 3 (lower is better)
Translates to: PWAFQDYYRQLQVARGLAKNSKG*AGNEPS
Trigger: AGATGGCTCGTTACCAGCCAACCCTTTTGAATTCTT...GGCCAGGCCTCTAGCTACTTGGAGTTGTCTGTAATAATCTTGAAAGGCCCAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CAA 90 bp CTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCTTCAAATGGAATCCAGCCACCCTTGCACTTCCGTaGTCTCTTCTTGCAAATAGA +
Preference number: 3 (lower is better)
Translates to: LSSYPGPHLFMLFKWNPATLALP*SLLANR
Trigger: TCTATTTGCAAGAAGAGACAACGGAAGTGCAAGGGT...GGCTGGATTCCATTTGAAGAGCATAAACAGATGTGGTCCAGGGTAGGAACTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
3UTR CCA 72 bp CAAAGCAGTTCATACAAATCTGCTCAGCTCAGAGACTaGGCTTCCCAGCTCTATAAAGTACAGTTAGCCCCT +
Preference number: 3 (lower is better)
Translates to: QSSSYKSAQLRD*ASQLYKVQLAP
Trigger: AGGGGCTAACTGTACTTTATAGAGCTGGGAAGCCCAGTCTCTGAGCTGAGCAGATTTGTATGAACTGCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CCA 72 bp ACAATAGATGTCAGCTTTATTGCGCGGATGGCTCAATaGATTTCAACTCTGAATGGCCTCACTGTGCTCCCA +
Preference number: 3 (lower is better)
Translates to: TIDVSFIARMAQ*ISTLNGLTVLP
Trigger: TGGGAGCACAGTGAGGCCATTCAGAGTTGAAATCCATTGAGCCATCCGCGCAATAAAGCTGACATCTATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CAA 90 bp TGGGCCTTTCAAGATTATTACAGACAACTCCAAGTAGCTAGAGGCCTGGCCTTATTTGTTCTTGGTCTGTaGCAATGGTTCTCAGGAGAC +
Preference number: 3 (lower is better)
Translates to: WAFQDYYRQLQVARGLALFVLGL*QWFSGD
Trigger: GTCTCCTGAGAACCATTGCAACAGACCAAGAACAAA...TAAGGCCAGGCCTCTAGCTACTTGGAGTTGTCTGTAATAATCTTGAAAGGCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CCA 72 bp AACCAGATTTACACTTCATACACACAGGCAAGGCCATaGGGCTTTCCAATCTTTACACTCCGGACTGTGTTT +
Preference number: 3 (lower is better)
Translates to: NQIYTSYTQARP*GFPIFTLRTVF
Trigger: AAACACAGTCCGGAGTGTAAAGATTGGAAAGCCCCATGGCCTTGCCTGTGTGTATGAAGTGTAAATCTGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CAA 90 bp TCAGGAGACATTTCATTTGTGTCTGGGACATGGGAATGTCCTGAACTAATCTTGTTCCGTTGTCTCTTCTaGCAAATAGAGGTGGTGCTG +
Preference number: 3 (lower is better)
Translates to: SGDISFVSGTWECPELILFRCLF*QIEVVL
Trigger: CAGCACCACCTCTATTTGCAAGAAGAGACAACGGAA...CAAGATTAGTTCAGGACATTCCCATGTCCCAGACACAAATGAAATGTCTCCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
3UTR TCA 72 bp CTGTTTATGCTCTTCAAATGGAATCCAGCCTTCAGATaGACCACTGCAATAAACCCTACTCTCTGCTTGCCT +
Preference number: 3 (lower is better)
Translates to: LFMLFKWNPAFR*TTAINPTLCLP
Trigger: AGGCAAGCAGAGAGTAGGGTTTATTGCAGTGGTTCATCTGAAGGCTGGATTCCATTTGAAGAGCATAAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
3UTR TCA 72 bp ACATGCCATGAGAACAGGTTTCTCTGTCATGTGATATaGAACAGGGAAGCAGATGCCTTTAAGTCAGGATGG +
Preference number: 3 (lower is better)
Translates to: TCHENRFLCHVI*NREADAFKSGW
Trigger: CCATCCTGACTTAAAGGCATCTGCTTCCCTGTTTCATATCACATGACAGAGAAACCTGTTCTCATGGCATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR GCA 72 bp AAATGGAGGACTTTGGCAACCAATGTCAAAGTACTTTaGATACCAAAAACGCTCTGGACAGGTGTGTGTGTC +
Preference number: 3 (lower is better)
Translates to: KWRTLATNVKVL*IPKTLWTGVCV
Trigger: GACACACACACCTGTCCAGAGCGTTTTTGGTATGCAAAGTACTTTGACATTGGTTGCCAAAGTCCTCCATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CAA 90 bp GTGGGAGAATACAGGATGGAAAAGCAGACTTCCACGTATTTTCACTTAACTGCATGCCATCTAGAATCTTaGGAGGTATCTACCTATGGT +
Preference number: 3 (lower is better)
Translates to: VGEYRMEKQTSTYFHLTACHLES*EVSTYG
Trigger: ACCATAGGTAGATACCTCCAAAGATTCTAGATGGCA...TGCAGTTAAGTGAAAATACGTGGAAGTCTGCTTTTCCATCCTGTATTCTCCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CCA 72 bp ACCAATGTCAAAGTACTTTGCATACCAAAAACGCTCTaGACAGGTGTGTGTGTCTCTGCTAAATATTCAGGA +
Preference number: 3 (lower is better)
Translates to: TNVKVLCIPKTL*TGVCVSAKYSG
Trigger: TCCTGAATATTTAGCAGAGACACACACACCTGTCCAGAGCGTTTTTGGTATGCAAAGTACTTTGACATTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR-3UTR CAA 90 bp GTGGGAGAATACAGGATGGAAAAGCAGACTTCCACGTATTTTCACTTAACTGCAATAAAATGGAGGACTTaGGCAACCAATGTCAAAGTA +
Preference number: 3 (lower is better)
Translates to: VGEYRMEKQTSTYFHLTAIKWRT*ATNVKV
Trigger: TACTTTGACATTGGTTGCCAAAGTCCTCCATTTTAT...TGCAGTTAAGTGAAAATACGTGGAAGTCTGCTTTTCCATCCTGTATTCTCCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CCA 72 bp AACAACCTTCACCCACCTTTACAAAACCAAAGAGGGTaGAAGGAGGTATTTGCAAAAAGTGAATTAACACTG +
Preference number: 3 (lower is better)
Translates to: NNLHPPLQNQRG*KEVFAKSELTL
Trigger: CAGTGTTAATTCACTTTTTGCAAATACCTCCTTCCACCCTCTTTGGTTTTGTAAAGGTGGGTGAAGGTTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR TCA 72 bp AAAGCAGACTTCCACGTATTTTCACTTAACTGCAATTaGGGAGGAATTCTGATACAGATGGTGATATATAAG +
Preference number: 3 (lower is better)
Translates to: KADFHVFSLNCN*GGILIQMVIYK
Trigger: CTTATATATCACCATCTGTATCAGAATTCCTCCTCAATTGCAGTTAAGTGAAAATACGTGGAAGTCTGCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp TTAGGGAAGAGCAGAGAGGACATGGCCTGGTCAGGTAGGAGGAAGGGGATAGAGGAGGGGACGCTCGGCTaGGGGCGAGGGAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: LGKSREDMAWSGRRKGIEEGTLG*GRGRRR
Trigger: CCTCCTCCTCCCTCGCCCGCAGCCGAGCGTCCCCTC...CTCTATCCCCTTCCTCCTACCTGACCAGGCCATGTCCTCTCTGCTCTTCCCTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000064778.8
CDS-3UTR GCA 90 bp GTGTTTCTTCAGCTCTGCGGGTGGGTCCCAACTGGCCCACTCTACTACTGCCCCCCCCCTTGGCATGCCTaGCTGTGCGCTCAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: VFLQLCGWVPTGPLYYCPPPWHA*LCAQRL
Trigger: GAGCCTCTGAGCGCACAGGCAGGCATGCCAAGGGGG...GGGGCAGTAGTAGAGTGGGCCAGTTGGGACCCACCCGCAGAGCTGAAGAAACAC
63% GC, longest homopolymer 9 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CAGGGCTGGCCATGGAATGTTGAAGCTGGCCTGCCAGGAATTTTGAAGGCTGGGCCGTGTCCAGTAGGGTaGCGGATGGCGCGCGGGGAC +
Preference number: 4 (lower is better)
Translates to: QGWPWNVEAGLPGILKAGPCPVG*RMARGD
Trigger: GTCCCCGCGCGCCATCCGCCACCCTACTGGACACGG...CCCAGCCTTCAAAATTCCTGGCAGGCCAGCTTCAACATTCCATGGCCAGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp GTGTTTCTTCAGCTCTGCGGGTGGGTCCCAACTGGCCCACTCTACTACTGCCCCATCACAGCAAGAGGCTaGGGCCGGCTGAACTGGGGC +
Preference number: 4 (lower is better)
Translates to: VFLQLCGWVPTGPLYYCPITARG*GRLNWG
Trigger: GCCCCAGTTCAGCCGGCCTCAGCCTCTTGCTGTGAT...GGGGCAGTAGTAGAGTGGGCCAGTTGGGACCCACCCGCAGAGCTGAAGAAACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp GTGTTTCTTCAGCTCTGCGGGTGGGTCCCAACTGGCCCACTCTACTACTGCCCCCCTACCAGAGGCACATaGCTGTCCCCGCTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: VFLQLCGWVPTGPLYYCPPTRGT*LSPLSW
Trigger: CCAGGAGAGCGGGGACAGTCATGTGCCTCTGGTAGG...GGGGCAGTAGTAGAGTGGGCCAGTTGGGACCCACCCGCAGAGCTGAAGAAACAC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp TTAGGGAAGAGCAGAGAGGACATGGCCTGGTCAGGTAGGAGGAAGGGGATAGAGCAGCCAAGCGCTGGGTaGCGGAGGCTGCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LGKSREDMAWSGRRKGIEQPSAG*RRLLLG
Trigger: GCCCAGCAGCAGCCTCCGGCACCCAGCGCTTGGCTG...CTCTATCCCCTTCCTCCTACCTGACCAGGCCATGTCCTCTCTGCTCTTCCCTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp GTGTTTCTTCAGCTCTGCGGGTGGGTCCCAACTGGCCCACTCTACTACTGCCCCGGAAGCCCAGGAAGGTaGGCCCCCAAACTCCTGGCT +
Preference number: 4 (lower is better)
Translates to: VFLQLCGWVPTGPLYYCPGSPGR*APKLLA
Trigger: AGCCAGGAGTTTGGGGGCCCACCTTCCTGGGCTTCC...GGGGCAGTAGTAGAGTGGGCCAGTTGGGACCCACCCGCAGAGCTGAAGAAACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp GTGTTTCTTCAGCTCTGCGGGTGGGTCCCAACTGGCCCACTCTACTACTGCCCCCTTCAGCTCTGCGGGTaGGTCCCAACTGGCCCACTC +
Preference number: 4 (lower is better)
Translates to: VFLQLCGWVPTGPLYYCPLQLCG*VPTGPL
Trigger: GAGTGGGCCAGTTGGGACCCACCCGCAGAGCTGAAG...GGGGCAGTAGTAGAGTGGGCCAGTTGGGACCCACCCGCAGAGCTGAAGAAACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp GTGTTTCTTCAGCTCTGCGGGTGGGTCCCAACTGGCCCACTCTACTACTGCCCCCAGCAGGGTACCTGCTaGCATTGCCATGGTGGTGCC +
Preference number: 4 (lower is better)
Translates to: VFLQLCGWVPTGPLYYCPQQGTC*HCHGGA
Trigger: GGCACCACCATGGCAATGTCAGCAGGTACCCTGCTG...GGGGCAGTAGTAGAGTGGGCCAGTTGGGACCCACCCGCAGAGCTGAAGAAACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp CAGGGCTGGCCATGGAATGTTGAAGCTGGCCTGCCAGGAATTTTGAAGGCTGGGGATCCGGTGAGCAGCTaGAGGCGAAAACGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: QGWPWNVEAGLPGILKAGDPVSS*RRKRRR
Trigger: CCGCCGCCGTTTTCGCCTGCAGCTGCTCACCGGATC...CCCAGCCTTCAAAATTCCTGGCAGGCCAGCTTCAACATTCCATGGCCAGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp ACTTGGGCCATGAATGGCACAGGTAACCAAGAGCTTGGCCTGCCTGCAAGCTCTGCCGGAGGCTGCTGCTaGGCAATCCAGGCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: TWAMNGTGNQELGLPASSAGGCC*AIQAPG
Trigger: GCCAGGAGCCTGGATTGCCCAGCAGCAGCCTCCGGC...AGAGCTTGCAGGCAGGCCAAGCTCTTGGTTACCTGTGCCATTCATGGCCCAAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CTTTTCCTTCACTATCCTCACCTTCAGAGCTGCCAGCACCCACCTGGAATGTGGGGCCCAGCCAAGCGCTaGGTGCCGGAGGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: LFLHYPHLQSCQHPPGMWGPAKR*VPEAAA
Trigger: AGCAGCAGCCTCCGGCACCCAGCGCTTGGCTGGGCC...CCACATTCCAGGTGGGTGCTGGCAGCTCTGAAGGTGAGGATAGTGAAGGAAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CCAAGAGCTTGGCCTGCCTGCAAGCTCTATGGTCAGACAGGTGAGTCCTGGCACCGGGTGGGTCCCAACTaGCCCACTCTACTACTGCCC +
Preference number: 4 (lower is better)
Translates to: PRAWPACKLYGQTGESWHRVGPN*PTLLLP
Trigger: GGGCAGTAGTAGAGTGGGCCAGTTGGGACCCACCCG...GTGCCAGGACTCACCTGTCTGACCATAGAGCTTGCAGGCAGGCCAAGCTCTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CAA 72 bp CCCACTCTACTACTGCCCCTCTCTGGATTCCCAAGCTaGGCAAGCAGCGGGGGCCGCACAGCCAGTAGTGAT +
Preference number: 4 (lower is better)
Translates to: PTLLLPLSGFPS*ASSGGRTASSD
Trigger: ATCACTACTGGCTGTGCGGCCCCCGCTGCTTGCCAAGCTTGGGAATCCAGAGAGGGGCAGTAGTAGAGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp GTGTTTCTTCAGCTCTGCGGGTGGGTCCCAACTGGCCCACTCTACTACTGCCCCCTGGGAGGTGGAAGGTaGCTTCAGTGCCACAGGAAG +
Preference number: 4 (lower is better)
Translates to: VFLQLCGWVPTGPLYYCPLGGGR*LQCHRK
Trigger: CTTCCTGTGGCACTGAAGGCACCTTCCACCTCCCAG...GGGGCAGTAGTAGAGTGGGCCAGTTGGGACCCACCCGCAGAGCTGAAGAAACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp GTGTTTCTTCAGCTCTGCGGGTGGGTCCCAACTGGCCCACTCTACTACTGCCCCCAGGACAGTCCTCTGTaGCTCCCTCCCCAAGAACCA +
Preference number: 4 (lower is better)
Translates to: VFLQLCGWVPTGPLYYCPQDSPL*LPPQEP
Trigger: TGGTTCTTGGGGAGGGAGGCACAGAGGACTGTCCTG...GGGGCAGTAGTAGAGTGGGCCAGTTGGGACCCACCCGCAGAGCTGAAGAAACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp GTGTTTCTTCAGCTCTGCGGGTGGGTCCCAACTGGCCCACTCTACTACTGCCCCCTGCTGGATAGGCTGTaGGGTAACCCGTGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: VFLQLCGWVPTGPLYYCPLLDRL*GNPCRP
Trigger: TGGCCTACACGGGTTACCCCACAGCCTATCCAGCAG...GGGGCAGTAGTAGAGTGGGCCAGTTGGGACCCACCCGCAGAGCTGAAGAAACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp GTGTTTCTTCAGCTCTGCGGGTGGGTCCCAACTGGCCCACTCTACTACTGCCCCCAGGCTTTACCAGTGTaGGGGCACGTAGCTGTACGC +
Preference number: 4 (lower is better)
Translates to: VFLQLCGWVPTGPLYYCPQALPV*GHVAVR
Trigger: GCGTACAGCTACGTGCCCCCACACTGGTAAAGCCTG...GGGGCAGTAGTAGAGTGGGCCAGTTGGGACCCACCCGCAGAGCTGAAGAAACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp AATAAACCCTACTCTCTGCTTGCCTCTAGACTGGGATCCCCAGGGACAGGACACTCACAGGGCCCAGAATaGGGCCCACCCCCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: NKPYSLLASRLGSPGTGHSQGPE*GPPPLG
Trigger: GCCCAGAGGGGGTGGGCCCCATTCTGGGCCCTGTGA...GTGTCCTGTCCCTGGGGATCCCAGTCTAGAGGCAAGCAGAGAGTAGGGTTTATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CAGGGCTGGCCATGGAATGTTGAAGCTGGCCTGCCAGGAATTTTGAAGGCTGGGGGGGTCTGGAGATGCTaGTCTTGCTGGGGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: QGWPWNVEAGLPGILKAGGVWRC*SCWGQA
Trigger: GGCCTGACCCCAGCAAGACCAGCATCTCCAGACCCC...CCCAGCCTTCAAAATTCCTGGCAGGCCAGCTTCAACATTCCATGGCCAGCCCTG
60% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp CTTGCTGGGGTCAGGCCCAAAGCTGATCTCACCCATTTGATTCCTATGGGCCGGTTCGGCCAGTCCACCTaGTCCTTCTCCTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: LAGVRPKADLTHLIPMGRFGQST*SFSWRW
Trigger: CCACCTCCAGGAGAAGGAGCAGGTGGACTGGCCGAA...CCGGCCCATAGGAATCAAATGGGTGAGATCAGCTTTGGGCCTGACCCCAGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp AATAAACCCTACTCTCTGCTTGCCTCTAGACTGGGATCCCCAGGGACAGGACACGGTGCCGGAGGCTGCTaGTGGGCAATCCAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: NKPYSLLASRLGSPGTGHGAGGC*WAIQAP
Trigger: AGGAGCCTGGATTGCCCAGCAGCAGCCTCCGGCACC...GTGTCCTGTCCCTGGGGATCCCAGTCTAGAGGCAAGCAGAGAGTAGGGTTTATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp AATAAACCCTACTCTCTGCTTGCCTCTAGACTGGGATCCCCAGGGACAGGACACCTGGGTGCCGGAGGCTaGTGCTGGGCAATCCAGGCT +
Preference number: 4 (lower is better)
Translates to: NKPYSLLASRLGSPGTGHLGAGG*CWAIQA
Trigger: AGCCTGGATTGCCCAGCAGCAGCCTCCGGCACCCAG...GTGTCCTGTCCCTGGGGATCCCAGTCTAGAGGCAAGCAGAGAGTAGGGTTTATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp GTGTTTCTTCAGCTCTGCGGGTGGGTCCCAACTGGCCCACTCTACTACTGCCCCGGCCCACTCTACTACTaGCCCTCTCTGGATTCCCAA +
Preference number: 4 (lower is better)
Translates to: VFLQLCGWVPTGPLYYCPGPLYY*PSLDSQ
Trigger: TTGGGAATCCAGAGAGGGGCAGTAGTAGAGTGGGCC...GGGGCAGTAGTAGAGTGGGCCAGTTGGGACCCACCCGCAGAGCTGAAGAAACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp GATGTAGCCTGCTCAACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGCCGTGTCCAGTAGGGTaGCGGATGGCGCGCGGGGAC +
Preference number: 4 (lower is better)
Translates to: DVACSTALSSYPGPHLFMPCPVG*RMARGD
Trigger: GTCCCCGCGCGCCATCCGCCACCCTACTGGACACGG...CATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGTTGAGCAGGCTACATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR CCA 90 bp CCCAGGTTCTCAGCCTGGGGTATTAAGCTGCTAATAACACGCCTACATACTCAGCCGTGTCCAGTAGGGTaGCGGATGGCGCGCGGGGAC +
Preference number: 4 (lower is better)
Translates to: PRFSAWGIKLLITRLHTQPCPVG*RMARGD
Trigger: GTCCCCGCGCGCCATCCGCCACCCTACTGGACACGG...CTGAGTATGTAGGCGTGTTATTAGCAGCTTAATACCCCAGGCTGAGAACCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR CCA 90 bp CTTGCTGGGGTCAGGCCCAAAGCTGATCTCACCCATTTGATTCCTATGGGCCGGTGGTGGGGTACAGGCTaGGATTGTAGGCAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: LAGVRPKADLTHLIPMGRWWGTG*DCRQGQ
Trigger: CTGCCCCTGCCTACAATCCCAGCCTGTACCCCACCA...CCGGCCCATAGGAATCAAATGGGTGAGATCAGCTTTGGGCCTGACCCCAGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp GTGTTTCTTCAGCTCTGCGGGTGGGTCCCAACTGGCCCACTCTACTACTGCCCCCAGAGGGAATGCTGTTaGGCTGGACGACCGTGGTAT +
Preference number: 4 (lower is better)
Translates to: VFLQLCGWVPTGPLYYCPQRECC*AGRPWY
Trigger: ATACCACGGTCGTCCAGCCCAACAGCATTCCCTCTG...GGGGCAGTAGTAGAGTGGGCCAGTTGGGACCCACCCGCAGAGCTGAAGAAACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CCAAGAGCTTGGCCTGCCTGCAAGCTCTATGGTCAGACAGGTGAGTCCTGGCACCAGGCTTTACCAGTGTaGGGGCACGTAGCTGTACGC +
Preference number: 4 (lower is better)
Translates to: PRAWPACKLYGQTGESWHQALPV*GHVAVR
Trigger: GCGTACAGCTACGTGCCCCCACACTGGTAAAGCCTG...GTGCCAGGACTCACCTGTCTGACCATAGAGCTTGCAGGCAGGCCAAGCTCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp GTGTTTCTTCAGCTCTGCGGGTGGGTCCCAACTGGCCCACTCTACTACTGCCCCTCAGAGGCTGAAGTCTaGATGACACAGGGCATCCGG +
Preference number: 4 (lower is better)
Translates to: VFLQLCGWVPTGPLYYCPSEAEV*MTQGIR
Trigger: CCGGATGCCCTGTGTCATCCAGACTTCAGCCTCTGA...GGGGCAGTAGTAGAGTGGGCCAGTTGGGACCCACCCGCAGAGCTGAAGAAACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp GTGTTTCTTCAGCTCTGCGGGTGGGTCCCAACTGGCCCACTCTACTACTGCCCCGGTCCTAAAGTTCCTTaGAAGCCCAGGAAGGTGGGC +
Preference number: 4 (lower is better)
Translates to: VFLQLCGWVPTGPLYYCPGPKVP*KPRKVG
Trigger: GCCCACCTTCCTGGGCTTCCAAGGAACTTTAGGACC...GGGGCAGTAGTAGAGTGGGCCAGTTGGGACCCACCCGCAGAGCTGAAGAAACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp GTGTTTCTTCAGCTCTGCGGGTGGGTCCCAACTGGCCCACTCTACTACTGCCCCCTGAAAAAGGGGTGCTaGACCTGGGCTCTTCCAGAC +
Preference number: 4 (lower is better)
Translates to: VFLQLCGWVPTGPLYYCPLKKGC*TWALPD
Trigger: GTCTGGAAGAGCCCAGGTCCAGCACCCCTTTTTCAG...GGGGCAGTAGTAGAGTGGGCCAGTTGGGACCCACCCGCAGAGCTGAAGAAACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp ACCAGCATGCTGCTCACTGTGGGCCTGTTCCCTTCCATAACCTGTTTCCTCATTTCACAGGGCCCAGAATaGGGCCCACCCCCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: TSMLLTVGLFPSITCFLISQGPE*GPPPLG
Trigger: GCCCAGAGGGGGTGGGCCCCATTCTGGGCCCTGTGA...AATGAGGAAACAGGTTATGGAAGGGAACAGGCCCACAGTGAGCAGCATGCTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp CTTGCTGGGGTCAGGCCCAAAGCTGATCTCACCCATTTGATTCCTATGGGCCGGGCCTCGTGCTGTCCTTaGACATGTCTTCGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: LAGVRPKADLTHLIPMGRASCCP*TCLRSW
Trigger: CCAGGACCGAAGACATGTTCAAGGACAGCACGAGGC...CCGGCCCATAGGAATCAAATGGGTGAGATCAGCTTTGGGCCTGACCCCAGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp CTTGCTGGGGTCAGGCCCAAAGCTGATCTCACCCATTTGATTCCTATGGGCCGGATCCACTGGAGAGACTaGGGGACTGGGACCCAAGTC +
Preference number: 4 (lower is better)
Translates to: LAGVRPKADLTHLIPMGRIHWRD*GTGTQV
Trigger: GACTTGGGTCCCAGTCCCTCAGTCTCTCCAGTGGAT...CCGGCCCATAGGAATCAAATGGGTGAGATCAGCTTTGGGCCTGACCCCAGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp TTAGGGAAGAGCAGAGAGGACATGGCCTGGTCAGGTAGGAGGAAGGGGATAGAGGTAGGCAGGGGCAGCTaGTGGATAGGCTGTGGGGTA +
Preference number: 4 (lower is better)
Translates to: LGKSREDMAWSGRRKGIEVGRGS*WIGCGV
Trigger: TACCCCACAGCCTATCCAGCAGCTGCCCCTGCCTAC...CTCTATCCCCTTCCTCCTACCTGACCAGGCCATGTCCTCTCTGCTCTTCCCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR GCA 90 bp ACTTGGGCCATGAATGGCACAGGTAACCAAGAGCTTGGCCTGCCTGCAAGCTCTCATGGAGACAGGGTGTaGCCCAATCGCCGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: TWAMNGTGNQELGLPASSHGDRV*PNRRVL
Trigger: CAGCACACGGCGATTGGGGCACACCCTGTCTCCATG...AGAGCTTGCAGGCAGGCCAAGCTCTTGGTTACCTGTGCCATTCATGGCCCAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp GTGTTTCTTCAGCTCTGCGGGTGGGTCCCAACTGGCCCACTCTACTACTGCCCCCAGATTTGGATGGGCTaGAGGCTTTACCAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: VFLQLCGWVPTGPLYYCPQIWMG*RLYQCG
Trigger: CCCACACTGGTAAAGCCTGCAGCCCATCCAAATCTG...GGGGCAGTAGTAGAGTGGGCCAGTTGGGACCCACCCGCAGAGCTGAAGAAACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp CCAAGAGCTTGGCCTGCCTGCAAGCTCTATGGTCAGACAGGTGAGTCCTGGCACAGGTCCAGGGCCAGATaGTTTGGCCAGAGACCTTTC +
Preference number: 4 (lower is better)
Translates to: PRAWPACKLYGQTGESWHRSRAR*FGQRPF
Trigger: GAAAGGTCTCTGGCCAAAGCATCTGGCCCTGGACCT...GTGCCAGGACTCACCTGTCTGACCATAGAGCTTGCAGGCAGGCCAAGCTCTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp ACTTGGGCCATGAATGGCACAGGTAACCAAGAGCTTGGCCTGCCTGCAAGCTCTTCCAAGGCCTCGGGATaGTGGGATCCTACCACCCTG +
Preference number: 4 (lower is better)
Translates to: TWAMNGTGNQELGLPASSSKASG*WDPTTL
Trigger: CAGGGTGGTAGGATCCCAGCATCCCGAGGCCTTGGA...AGAGCTTGCAGGCAGGCCAAGCTCTTGGTTACCTGTGCCATTCATGGCCCAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp CTTTTCCTTCACTATCCTCACCTTCAGAGCTGCCAGCACCCACCTGGAATGTGGCCCCCATGTAGCCTCTaGCCAGTCTTCAACCCCCGC +
Preference number: 4 (lower is better)
Translates to: LFLHYPHLQSCQHPPGMWPPCSL*PVFNPR
Trigger: GCGGGGGTTGAAGACTGGGCAGAGGCTACATGGGGG...CCACATTCCAGGTGGGTGCTGGCAGCTCTGAAGGTGAGGATAGTGAAGGAAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp TTAGGGAAGAGCAGAGAGGACATGGCCTGGTCAGGTAGGAGGAAGGGGATAGAGGCATCCTGGGGCCAGTaGTGTAGCTCACTGTCAGGC +
Preference number: 4 (lower is better)
Translates to: LGKSREDMAWSGRRKGIEASWGQ*CSSLSG
Trigger: GCCTGACAGTGAGCTACAGCACTGGCCCCAGGATGC...CTCTATCCCCTTCCTCCTACCTGACCAGGCCATGTCCTCTCTGCTCTTCCCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CCAAGAGCTTGGCCTGCCTGCAAGCTCTATGGTCAGACAGGTGAGTCCTGGCACGTTACTCTGGGTCGGTaGGACCTTGTATGGTGTCCC +
Preference number: 4 (lower is better)
Translates to: PRAWPACKLYGQTGESWHVTLGR*DLVWCP
Trigger: GGGACACCATACAAGGTCCCACCGACCCAGAGTAAC...GTGCCAGGACTCACCTGTCTGACCATAGAGCTTGCAGGCAGGCCAAGCTCTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CTTGCTGGGGTCAGGCCCAAAGCTGATCTCACCCATTTGATTCCTATGGGCCGGGGAATGCTGTTGGGCTaGACGACCGTGGTATGGTGG +
Preference number: 4 (lower is better)
Translates to: LAGVRPKADLTHLIPMGRGMLLG*TTVVWW
Trigger: CCACCATACCACGGTCGTCCAGCCCAACAGCATTCC...CCGGCCCATAGGAATCAAATGGGTGAGATCAGCTTTGGGCCTGACCCCAGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CCAAGAGCTTGGCCTGCCTGCAAGCTCTATGGTCAGACAGGTGAGTCCTGGCACGGCGGCAACAGGTGCTaGGTAGATAGCAGAGGGAAT +
Preference number: 4 (lower is better)
Translates to: PRAWPACKLYGQTGESWHGGNRC*VDSRGN
Trigger: ATTCCCTCTGCTATCTACCCAGCACCTGTTGCCGCC...GTGCCAGGACTCACCTGTCTGACCATAGAGCTTGCAGGCAGGCCAAGCTCTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp ACTTGGGCCATGAATGGCACAGGTAACCAAGAGCTTGGCCTGCCTGCAAGCTCTAAGGGGTGCTGGACCTaGGCTCTTCCAGACCACAGC +
Preference number: 4 (lower is better)
Translates to: TWAMNGTGNQELGLPASSKGCWT*ALPDHS
Trigger: GCTGTGGTCTGGAAGAGCCCAGGTCCAGCACCCCTT...AGAGCTTGCAGGCAGGCCAAGCTCTTGGTTACCTGTGCCATTCATGGCCCAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp ACTTGGGCCATGAATGGCACAGGTAACCAAGAGCTTGGCCTGCCTGCAAGCTCTACTGGGACCCAAGTCTaGCTTAGGCAGGGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: TWAMNGTGNQELGLPASSTGTQV*LRQGWP
Trigger: TGGCCAGCCCTGCCTAAGCCAGACTTGGGTCCCAGT...AGAGCTTGCAGGCAGGCCAAGCTCTTGGTTACCTGTGCCATTCATGGCCCAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CAA 72 bp CACTGTCAGGCGGCTACATCCCTTGTCCTCTCTTGCTaGCCTGCCTTCAATGAGACGGCCCTTCCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: HCQAATSLVLSC*PAFNETALPAL
Trigger: CAGAGCTGGAAGGGCCGTCTCATTGAAGGCAGGCAAGCAAGAGAGGACAAGGGATGTAGCCGCCTGACAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CAA 72 bp CCTGAGGAGAAAGGCTGGGGTCTGGAGATGCTGGTCTaGCTGGGGTCAGGCCCAAAGCTGATCTCACCCATT +
Preference number: 4 (lower is better)
Translates to: PEEKGWGLEMLV*LGSGPKLISPI
Trigger: AATGGGTGAGATCAGCTTTGGGCCTGACCCCAGCAAGACCAGCATCTCCAGACCCCAGCCTTTCTCCTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp ACTTGGGCCATGAATGGCACAGGTAACCAAGAGCTTGGCCTGCCTGCAAGCTCTCCGTGGTATGGTGGATaGCATGAGGCTGGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: TWAMNGTGNQELGLPASSPWYGG*HEAGQH
Trigger: ATGCTGCCCAGCCTCATGTCATCCACCATACCACGG...AGAGCTTGCAGGCAGGCCAAGCTCTTGGTTACCTGTGCCATTCATGGCCCAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp CTTGCTGGGGTCAGGCCCAAAGCTGATCTCACCCATTTGATTCCTATGGGCCGGCCTCTCCTCTCGGGATaGGGGGCTACTGTCCTAAAA +
Preference number: 4 (lower is better)
Translates to: LAGVRPKADLTHLIPMGRPLLSG*GATVLK
Trigger: TTTTAGGACAGTAGCCCCTCATCCCGAGAGGAGAGG...CCGGCCCATAGGAATCAAATGGGTGAGATCAGCTTTGGGCCTGACCCCAGCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp CTTTTCCTTCACTATCCTCACCTTCAGAGCTGCCAGCACCCACCTGGAATGTGGGAGGCTGAGGCCGGCTaGACTGGGGCTCATACTGAA +
Preference number: 4 (lower is better)
Translates to: LFLHYPHLQSCQHPPGMWEAEAG*TGAHTE
Trigger: TTCAGTATGAGCCCCAGTTCAGCCGGCCTCAGCCTC...CCACATTCCAGGTGGGTGCTGGCAGCTCTGAAGGTGAGGATAGTGAAGGAAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp CAGGGCTGGCCATGGAATGTTGAAGCTGGCCTGCCAGGAATTTTGAAGGCTGGGCAGACTCAAACTTCTTaGCCCCAGGCCAGTGAGGAG +
Preference number: 4 (lower is better)
Translates to: QGWPWNVEAGLPGILKAGQTQTS*PQASEE
Trigger: CTCCTCACTGGCCTGGGGTCAAGAAGTTTGAGTCTG...CCCAGCCTTCAAAATTCCTGGCAGGCCAGCTTCAACATTCCATGGCCAGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp TTAGGGAAGAGCAGAGAGGACATGGCCTGGTCAGGTAGGAGGAAGGGGATAGAGATCCACTGGAGAGACTaGGGGACTGGGACCCAAGTC +
Preference number: 4 (lower is better)
Translates to: LGKSREDMAWSGRRKGIEIHWRD*GTGTQV
Trigger: GACTTGGGTCCCAGTCCCTCAGTCTCTCCAGTGGAT...CTCTATCCCCTTCCTCCTACCTGACCAGGCCATGTCCTCTCTGCTCTTCCCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp CTTGCACTTCCGTTGTCTCTTCTTGCAAATAGAGGTGGTGCTGCTAGGGAACTGCGGCTGAGGCGGCGATaGCCTTGTCTTCTCCGGAGG +
Preference number: 4 (lower is better)
Translates to: LALPLSLLANRGGAARELRLRRR*PCLLRR
Trigger: CCTCCGGAGAAGACAAGGGCATCGCCGCCTCAGCCG...CAGTTCCCTAGCAGCACCACCTCTATTTGCAAGAAGAGACAACGGAAGTGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR GCA 90 bp AATAAACCCTACTCTCTGCTTGCCTCTAGACTGGGATCCCCAGGGACAGGACACCATGGAGACAGGGTGTaGCCCAATCGCCGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: NKPYSLLASRLGSPGTGHHGDRV*PNRRVL
Trigger: CAGCACACGGCGATTGGGGCACACCCTGTCTCCATG...GTGTCCTGTCCCTGGGGATCCCAGTCTAGAGGCAAGCAGAGAGTAGGGTTTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR GCA 90 bp CAGGGCTGGCCATGGAATGTTGAAGCTGGCCTGCCAGGAATTTTGAAGGCTGGGGTGCTGCTAGGGAACTaGTCCAGCACCGGTGTAAGA +
Preference number: 4 (lower is better)
Translates to: QGWPWNVEAGLPGILKAGVLLGN*SSTGVR
Trigger: TCTTACACCGGTGCTGGAGCAGTTCCCTAGCAGCAC...CCCAGCCTTCAAAATTCCTGGCAGGCCAGCTTCAACATTCCATGGCCAGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp ACAGCAAGGATATCCAGGGACTATCCATGTGGCCATAGGGAAGCAAGTGCTGTTCTGGGTGCCGGAGGCTaGTGCTGGGCAATCCAGGCT +
Preference number: 4 (lower is better)
Translates to: TARISRDYPCGHREASAVLGAGG*CWAIQA
Trigger: AGCCTGGATTGCCCAGCAGCAGCCTCCGGCACCCAG...AACAGCACTTGCTTCCCTATGGCCACATGGATAGTCCCTGGATATCCTTGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp ACCAGCATGCTGCTCACTGTGGGCCTGTTCCCTTCCATAACCTGTTTCCTCATTTGGCATGCCTGCCTGTaGGCTCAGAGGCTCCGGTGT +
Preference number: 4 (lower is better)
Translates to: TSMLLTVGLFPSITCFLIWHACL*AQRLRC
Trigger: ACACCGGAGCCTCTGAGCGCACAGGCAGGCATGCCA...AATGAGGAAACAGGTTATGGAAGGGAACAGGCCCACAGTGAGCAGCATGCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp ACAGCAAGGATATCCAGGGACTATCCATGTGGCCATAGGGAAGCAAGTGCTGTTCCCCCTTGGCATGCCTaGCTGTGCGCTCAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: TARISRDYPCGHREASAVPPWHA*LCAQRL
Trigger: GAGCCTCTGAGCGCACAGGCAGGCATGCCAAGGGGG...AACAGCACTTGCTTCCCTATGGCCACATGGATAGTCCCTGGATATCCTTGCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp TTAGGGAAGAGCAGAGAGGACATGGCCTGGTCAGGTAGGAGGAAGGGGATAGAGGTCCCAACTCCTGTGTaGCTCGGTTGGCCTTTGGGT +
Preference number: 4 (lower is better)
Translates to: LGKSREDMAWSGRRKGIEVPTPV*LGWPLG
Trigger: ACCCAAAGGCCAACCGAGGCACACAGGAGTTGGGAC...CTCTATCCCCTTCCTCCTACCTGACCAGGCCATGTCCTCTCTGCTCTTCCCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CTTGCACTTCCGTTGTCTCTTCTTGCAAATAGAGGTGGTGCTGCTAGGGAACTGCCATGGCCACACCGTTaGTCCTCGGGGCGGCAACAG +
Preference number: 4 (lower is better)
Translates to: LALPLSLLANRGGAARELPWPHR*SSGRQQ
Trigger: CTGTTGCCGCCCCGAGGACCAACGGTGTGGCCATGG...CAGTTCCCTAGCAGCACCACCTCTATTTGCAAGAAGAGACAACGGAAGTGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CCAAGAGCTTGGCCTGCCTGCAAGCTCTATGGTCAGACAGGTGAGTCCTGGCACTTCAACCCCCGCCTTTaGAGTCCGTGGAGGAAAAGA +
Preference number: 4 (lower is better)
Translates to: PRAWPACKLYGQTGESWHFNPRL*SPWRKR
Trigger: TCTTTTCCTCCACGGACTCCAAAGGCGGGGGTTGAA...GTGCCAGGACTCACCTGTCTGACCATAGAGCTTGCAGGCAGGCCAAGCTCTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CAGGGCTGGCCATGGAATGTTGAAGCTGGCCTGCCAGGAATTTTGAAGGCTGGGTCCTTCTCCTGGAGGTaGAGTCAGGTACAGGACGGA +
Preference number: 4 (lower is better)
Translates to: QGWPWNVEAGLPGILKAGSFSWR*SQVQDG
Trigger: TCCGTCCTGTACCTGACTCCACCTCCAGGAGAAGGA...CCCAGCCTTCAAAATTCCTGGCAGGCCAGCTTCAACATTCCATGGCCAGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp GTGTTTCTTCAGCTCTGCGGGTGGGTCCCAACTGGCCCACTCTACTACTGCCCCGGAGACATGGGAGGTTaGGGTAAGGATATGTCCAAG +
Preference number: 4 (lower is better)
Translates to: VFLQLCGWVPTGPLYYCPGDMGG*GKDMSK
Trigger: CTTGGACATATCCTTACCCCAACCTCCCATGTCTCC...GGGGCAGTAGTAGAGTGGGCCAGTTGGGACCCACCCGCAGAGCTGAAGAAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp GTGTTTCTTCAGCTCTGCGGGTGGGTCCCAACTGGCCCACTCTACTACTGCCCCCTCAGAGTCTGGTTCTaGTCCTCACCCATGGGAAAA +
Preference number: 4 (lower is better)
Translates to: VFLQLCGWVPTGPLYYCPLRVWF*SSPMGK
Trigger: TTTTCCCATGGGTGAGGACCAGAACCAGACTCTGAG...GGGGCAGTAGTAGAGTGGGCCAGTTGGGACCCACCCGCAGAGCTGAAGAAACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CCAAGAGCTTGGCCTGCCTGCAAGCTCTATGGTCAGACAGGTGAGTCCTGGCACGGGGTACCTCAAACTTaGAACAATTCGGGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: PRAWPACKLYGQTGESWHGVPQT*NNSGGQ
Trigger: CTGGCCACCCGAATTGTTCCAAGTTTGAGGTACCCC...GTGCCAGGACTCACCTGTCTGACCATAGAGCTTGCAGGCAGGCCAAGCTCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp TTAGGGAAGAGCAGAGAGGACATGGCCTGGTCAGGTAGGAGGAAGGGGATAGAGGGACCCCCAGATCTCTaGGAACGGGGTACCTCAAAC +
Preference number: 4 (lower is better)
Translates to: LGKSREDMAWSGRRKGIEGPPDL*ERGTSN
Trigger: GTTTGAGGTACCCCGTTCCCAGAGATCTGGGGGTCC...CTCTATCCCCTTCCTCCTACCTGACCAGGCCATGTCCTCTCTGCTCTTCCCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp ACCAGCATGCTGCTCACTGTGGGCCTGTTCCCTTCCATAACCTGTTTCCTCATTCGGGTGGGTCCCAACTaGCCCACTCTACTACTGCCC +
Preference number: 4 (lower is better)
Translates to: TSMLLTVGLFPSITCFLIRVGPN*PTLLLP
Trigger: GGGCAGTAGTAGAGTGGGCCAGTTGGGACCCACCCG...AATGAGGAAACAGGTTATGGAAGGGAACAGGCCCACAGTGAGCAGCATGCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp GTGTTTCTTCAGCTCTGCGGGTGGGTCCCAACTGGCCCACTCTACTACTGCCCCTATCAGTGGCTGGAATaGGTAGAGGACCTCTACCAC +
Preference number: 4 (lower is better)
Translates to: VFLQLCGWVPTGPLYYCPYQWLE*VEDLYH
Trigger: GTGGTAGAGGTCCTCTACCCATTCCAGCCACTGATA...GGGGCAGTAGTAGAGTGGGCCAGTTGGGACCCACCCGCAGAGCTGAAGAAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp TTAGGGAAGAGCAGAGAGGACATGGCCTGGTCAGGTAGGAGGAAGGGGATAGAGGCCTTTAAGTCAGGATaGGGACAGGCCCTTGGGCCT +
Preference number: 4 (lower is better)
Translates to: LGKSREDMAWSGRRKGIEAFKSG*GQALGP
Trigger: AGGCCCAAGGGCCTGTCCCCATCCTGACTTAAAGGC...CTCTATCCCCTTCCTCCTACCTGACCAGGCCATGTCCTCTCTGCTCTTCCCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp GTGTTTCTTCAGCTCTGCGGGTGGGTCCCAACTGGCCCACTCTACTACTGCCCCGCGCGGATGGCTCAATaGATTTCAACTCTGAATGGC +
Preference number: 4 (lower is better)
Translates to: VFLQLCGWVPTGPLYYCPARMAQ*ISTLNG
Trigger: GCCATTCAGAGTTGAAATCCATTGAGCCATCCGCGC...GGGGCAGTAGTAGAGTGGGCCAGTTGGGACCCACCCGCAGAGCTGAAGAAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp GGGACTTCAGTCTGTACGTTTTGTACCAACTCACTGGATCTGGACAGTGGGCAGTCAGCGACTCGGCTCTaGATCCTCTGCAGTAGCCGC +
Preference number: 4 (lower is better)
Translates to: GTSVCTFCTNSLDLDSGQSATRL*ILCSSR
Trigger: GCGGCTACTGCAGAGGATTCAGAGCCGAGTCGCTGA...CTGCCCACTGTCCAGATCCAGTGAGTTGGTACAAAACGTACAGACTGAAGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp TTAGGGAAGAGCAGAGAGGACATGGCCTGGTCAGGTAGGAGGAAGGGGATAGAGTTCAAACCAAAGCCATaGGGCAAGCACCGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LGKSREDMAWSGRRKGIEFKPKP*GKHRSS
Trigger: GGAGGAGCGGTGCTTGCCTCATGGCTTTGGTTTGAA...CTCTATCCCCTTCCTCCTACCTGACCAGGCCATGTCCTCTCTGCTCTTCCCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR TCA 90 bp CCAAGAGCTTGGCCTGCCTGCAAGCTCTATGGTCAGACAGGTGAGTCCTGGCACGTACATGAAAGGCCGTaGAGTGCTTTGACCTCTGTG +
Preference number: 4 (lower is better)
Translates to: PRAWPACKLYGQTGESWHVHERP*SALTSV
Trigger: CACAGAGGTCAAAGCACTTCACGGCCTTTCATGTAC...GTGCCAGGACTCACCTGTCTGACCATAGAGCTTGCAGGCAGGCCAAGCTCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp ACAGCAAGGATATCCAGGGACTATCCATGTGGCCATAGGGAAGCAAGTGCTGTTATCACAGCAAGAGGCTaGGGCCGGCTGAACTGGGGC +
Preference number: 4 (lower is better)
Translates to: TARISRDYPCGHREASAVITARG*GRLNWG
Trigger: GCCCCAGTTCAGCCGGCCTCAGCCTCTTGCTGTGAT...AACAGCACTTGCTTCCCTATGGCCACATGGATAGTCCCTGGATATCCTTGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp CTTTTCCTTCACTATCCTCACCTTCAGAGCTGCCAGCACCCACCTGGAATGTGGGCCTCGTGCTGTCCTTaGACATGTCTTCGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: LFLHYPHLQSCQHPPGMWASCCP*TCLRSW
Trigger: CCAGGACCGAAGACATGTTCAAGGACAGCACGAGGC...CCACATTCCAGGTGGGTGCTGGCAGCTCTGAAGGTGAGGATAGTGAAGGAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp ACTTGGGCCATGAATGGCACAGGTAACCAAGAGCTTGGCCTGCCTGCAAGCTCTCTGGCCATGGAATGTTaGAGCTGGCCTGCCAGGAAT +
Preference number: 4 (lower is better)
Translates to: TWAMNGTGNQELGLPASSLAMEC*SWPARN
Trigger: ATTCCTGGCAGGCCAGCTTCAACATTCCATGGCCAG...AGAGCTTGCAGGCAGGCCAAGCTCTTGGTTACCTGTGCCATTCATGGCCCAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp CCAAGAGCTTGGCCTGCCTGCAAGCTCTATGGTCAGACAGGTGAGTCCTGGCACCTGATCTCACCCATTTaGTTCCTATGGGCCGGTACT +
Preference number: 4 (lower is better)
Translates to: PRAWPACKLYGQTGESWHLISPI*FLWAGT
Trigger: AGTACCGGCCCATAGGAATCAAATGGGTGAGATCAG...GTGCCAGGACTCACCTGTCTGACCATAGAGCTTGCAGGCAGGCCAAGCTCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp CTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCTTCAAATGGAATCCAGCCCGGCTGAGGCGGCGATaGCCTTGTCTTCTCCGGAGG +
Preference number: 4 (lower is better)
Translates to: LSSYPGPHLFMLFKWNPARLRRR*PCLLRR
Trigger: CCTCCGGAGAAGACAAGGGCATCGCCGCCTCAGCCG...GGCTGGATTCCATTTGAAGAGCATAAACAGATGTGGTCCAGGGTAGGAACTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR GCA 90 bp GATGTAGCCTGCTCAACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGCGGGGCGGCAACAGGTaGTGGGTAGATAGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: DVACSTALSSYPGPHLFMRGGNR*WVDSRG
Trigger: CCCTCTGCTATCTACCCAGCACCTGTTGCCGCCCCG...CATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGTTGAGCAGGCTACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp CCCAGGTTCTCAGCCTGGGGTATTAAGCTGCTAATAACACGCCTACATACTCAGGCCCCAATCGCCGTGTaGTGGGGTGTAGTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: PRFSAWGIKLLITRLHTQAPIAV*WGVVSR
Trigger: CCTGCTGACTACACCCCAGCACACGGCGATTGGGGC...CTGAGTATGTAGGCGTGTTATTAGCAGCTTAATACCCCAGGCTGAGAACCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR GCA 90 bp CCTTGGGCCTTTCAAGATTATTACAGACAACTCCAAGTAGCTAGAGGCCTGGCCGCCCCAATCGCCGTGTaGTGGGGTGTAGTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: PWAFQDYYRQLQVARGLAAPIAV*WGVVSR
Trigger: CCTGCTGACTACACCCCAGCACACGGCGATTGGGGC...GGCCAGGCCTCTAGCTACTTGGAGTTGTCTGTAATAATCTTGAAAGGCCCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp ACTTGGGCCATGAATGGCACAGGTAACCAAGAGCTTGGCCTGCCTGCAAGCTCTGTGCTGCTAGGGAACTaGTCCAGCACCGGTGTAAGA +
Preference number: 4 (lower is better)
Translates to: TWAMNGTGNQELGLPASSVLLGN*SSTGVR
Trigger: TCTTACACCGGTGCTGGAGCAGTTCCCTAGCAGCAC...AGAGCTTGCAGGCAGGCCAAGCTCTTGGTTACCTGTGCCATTCATGGCCCAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp GGGACTTCAGTCTGTACGTTTTGTACCAACTCACTGGATCTGGACAGTGGGCAGGGGATCCTACCACCCTaGAGCCGCTTGGCAGGTCTA +
Preference number: 4 (lower is better)
Translates to: GTSVCTFCTNSLDLDSGQGILPP*SRLAGL
Trigger: TAGACCTGCCAAGCGGCTGCAGGGTGGTAGGATCCC...CTGCCCACTGTCCAGATCCAGTGAGTTGGTACAAAACGTACAGACTGAAGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp CAGGGCTGGCCATGGAATGTTGAAGCTGGCCTGCCAGGAATTTTGAAGGCTGGGAGAGCTTGGCCTGCCTaGAAGCTCTATGGTCAGACA +
Preference number: 4 (lower is better)
Translates to: QGWPWNVEAGLPGILKAGRAWPA*KLYGQT
Trigger: TGTCTGACCATAGAGCTTGCAGGCAGGCCAAGCTCT...CCCAGCCTTCAAAATTCCTGGCAGGCCAGCTTCAACATTCCATGGCCAGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp AAAGTGACCCTTGCACTTCCGTTGTCTCTTCTTGCAAATAGAGGTGGTGCTGCTGGTGCCGGAGGCTGCTaGTGGGCAATCCAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: KVTLALPLSLLANRGGAAGAGGC*WAIQAP
Trigger: AGGAGCCTGGATTGCCCAGCAGCAGCCTCCGGCACC...AGCAGCACCACCTCTATTTGCAAGAAGAGACAACGGAAGTGCAAGGGTCACTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp CGTGCTGTCCTTGAACATGTCTTCGGTCCTGGGCATTGTGACCCCAAAGTGTTTGAGGAGAGAGGGGTTTaGATCCTGGGGCCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: RAVLEHVFGPGHCDPKVFEERGV*ILGPVL
Trigger: CAGCACTGGCCCCAGGATGCAAACCCCTCTCTCCTC...AAACACTTTGGGGTCACAATGCCCAGGACCGAAGACATGTTCAAGGACAGCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp GTGTTTCTTCAGCTCTGCGGGTGGGTCCCAACTGGCCCACTCTACTACTGCCCCCAGTTCATACAAATCTaGTCAGCTCAGAGACTGGGC +
Preference number: 4 (lower is better)
Translates to: VFLQLCGWVPTGPLYYCPQFIQI*SAQRLG
Trigger: GCCCAGTCTCTGAGCTGAGCAGATTTGTATGAACTG...GGGGCAGTAGTAGAGTGGGCCAGTTGGGACCCACCCGCAGAGCTGAAGAAACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp CTTTTCCTTCACTATCCTCACCTTCAGAGCTGCCAGCACCCACCTGGAATGTGGCAGGACAGTCCTCTGTaGCTCCCTCCCCAAGAACCA +
Preference number: 4 (lower is better)
Translates to: LFLHYPHLQSCQHPPGMWQDSPL*LPPQEP
Trigger: TGGTTCTTGGGGAGGGAGGCACAGAGGACTGTCCTG...CCACATTCCAGGTGGGTGCTGGCAGCTCTGAAGGTGAGGATAGTGAAGGAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CTTTTCCTTCACTATCCTCACCTTCAGAGCTGCCAGCACCCACCTGGAATGTGGCTGCTGGATAGGCTGTaGGGTAACCCGTGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: LFLHYPHLQSCQHPPGMWLLDRL*GNPCRP
Trigger: TGGCCTACACGGGTTACCCCACAGCCTATCCAGCAG...CCACATTCCAGGTGGGTGCTGGCAGCTCTGAAGGTGAGGATAGTGAAGGAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp AATAAACCCTACTCTCTGCTTGCCTCTAGACTGGGATCCCCAGGGACAGGACACGTGTCCACTGGGAGGTaGAAGGTGCCTTCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: NKPYSLLASRLGSPGTGHVSTGR*KVPSVP
Trigger: TGGCACTGAAGGCACCTTCCACCTCCCAGTGGACAC...GTGTCCTGTCCCTGGGGATCCCAGTCTAGAGGCAAGCAGAGAGTAGGGTTTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR CCA 90 bp ACTTGGGCCATGAATGGCACAGGTAACCAAGAGCTTGGCCTGCCTGCAAGCTCTGGCGGCAACAGGTGCTaGGTAGATAGCAGAGGGAAT +
Preference number: 4 (lower is better)
Translates to: TWAMNGTGNQELGLPASSGGNRC*VDSRGN
Trigger: ATTCCCTCTGCTATCTACCCAGCACCTGTTGCCGCC...AGAGCTTGCAGGCAGGCCAAGCTCTTGGTTACCTGTGCCATTCATGGCCCAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp AATAAACCCTACTCTCTGCTTGCCTCTAGACTGGGATCCCCAGGGACAGGACACCCAATCGCCGTGTGCTaGGGTGTAGTCAGCAGGGTA +
Preference number: 4 (lower is better)
Translates to: NKPYSLLASRLGSPGTGHPIAVC*GVVSRV
Trigger: TACCCTGCTGACTACACCCCAGCACACGGCGATTGG...GTGTCCTGTCCCTGGGGATCCCAGTCTAGAGGCAAGCAGAGAGTAGGGTTTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR CCA 90 bp AATAAACCCTACTCTCTGCTTGCCTCTAGACTGGGATCCCCAGGGACAGGACACTGCTTGCCTCTAGACTaGGATCCCCAGGGACAGGAC +
Preference number: 4 (lower is better)
Translates to: NKPYSLLASRLGSPGTGHCLPLD*DPQGQD
Trigger: GTCCTGTCCCTGGGGATCCCAGTCTAGAGGCAAGCA...GTGTCCTGTCCCTGGGGATCCCAGTCTAGAGGCAAGCAGAGAGTAGGGTTTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR CCA 90 bp CCAAGAGCTTGGCCTGCCTGCAAGCTCTATGGTCAGACAGGTGAGTCCTGGCACTCCCTTAGGGAGACATaGGAGGTTGGGGTAAGGATA +
Preference number: 4 (lower is better)
Translates to: PRAWPACKLYGQTGESWHSLRET*EVGVRI
Trigger: TATCCTTACCCCAACCTCCCATGTCTCCCTAAGGGA...GTGCCAGGACTCACCTGTCTGACCATAGAGCTTGCAGGCAGGCCAAGCTCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CTTGCACTTCCGTTGTCTCTTCTTGCAAATAGAGGTGGTGCTGCTAGGGAACTGGGAAGCCCAGGAAGGTaGGCCCCCAAACTCCTGGCT +
Preference number: 4 (lower is better)
Translates to: LALPLSLLANRGGAARELGSPGR*APKLLA
Trigger: AGCCAGGAGTTTGGGGGCCCACCTTCCTGGGCTTCC...CAGTTCCCTAGCAGCACCACCTCTATTTGCAAGAAGAGACAACGGAAGTGCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CTTTTCCTTCACTATCCTCACCTTCAGAGCTGCCAGCACCCACCTGGAATGTGGGAGGGGTTTGCATCCTaGGGCCAGTGCTGTAGCTCA +
Preference number: 4 (lower is better)
Translates to: LFLHYPHLQSCQHPPGMWEGFAS*GQCCSS
Trigger: TGAGCTACAGCACTGGCCCCAGGATGCAAACCCCTC...CCACATTCCAGGTGGGTGCTGGCAGCTCTGAAGGTGAGGATAGTGAAGGAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CAGGGCTGGCCATGGAATGTTGAAGCTGGCCTGCCAGGAATTTTGAAGGCTGGGAGGATGCTCAGAGTCTaGTTCTGGTCCTCACCCATG +
Preference number: 4 (lower is better)
Translates to: QGWPWNVEAGLPGILKAGRMLRV*FWSSPM
Trigger: CATGGGTGAGGACCAGAACCAGACTCTGAGCATCCT...CCCAGCCTTCAAAATTCCTGGCAGGCCAGCTTCAACATTCCATGGCCAGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp GATGTAGCCTGCTCAACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGCTGGATTCCCAAGCTTaGCAAGCAGCGGGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: DVACSTALSSYPGPHLFMLDSQA*QAAGAA
Trigger: TGCGGCCCCCGCTGCTTGCCAAGCTTGGGAATCCAG...CATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGTTGAGCAGGCTACATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CCCAGGTTCTCAGCCTGGGGTATTAAGCTGCTAATAACACGCCTACATACTCAGCTTCAGCTCTGCGGGTaGGTCCCAACTGGCCCACTC +
Preference number: 4 (lower is better)
Translates to: PRFSAWGIKLLITRLHTQLQLCG*VPTGPL
Trigger: GAGTGGGCCAGTTGGGACCCACCCGCAGAGCTGAAG...CTGAGTATGTAGGCGTGTTATTAGCAGCTTAATACCCCAGGCTGAGAACCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CAA 72 bp CAGCCAGTCCCAACTCCTGTGTGCCTCGGTTGGCCTTaGGGTTGGACTCAACAGCATGCACCACAGAAGATA +
Preference number: 4 (lower is better)
Translates to: QPVPTPVCLGWP*GWTQQHAPQKI
Trigger: TATCTTCTGTGGTGCATGCTGTTGAGTCCAACCCAAAGGCCAACCGAGGCACACAGGAGTTGGGACTGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp CCTTGGGCCTTTCAAGATTATTACAGACAACTCCAAGTAGCTAGAGGCCTGGCCTCAGCGACTCGGCTCTaGATCCTCTGCAGTAGCCGC +
Preference number: 4 (lower is better)
Translates to: PWAFQDYYRQLQVARGLASATRL*ILCSSR
Trigger: GCGGCTACTGCAGAGGATTCAGAGCCGAGTCGCTGA...GGCCAGGCCTCTAGCTACTTGGAGTTGTCTGTAATAATCTTGAAAGGCCCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp GTGTTTCTTCAGCTCTGCGGGTGGGTCCCAACTGGCCCACTCTACTACTGCCCCGACAAAATCACCTTTTaGGGAAGTGCCAGGTCAGTT +
Preference number: 4 (lower is better)
Translates to: VFLQLCGWVPTGPLYYCPDKITF*GSARSV
Trigger: AACTGACCTGGCACTTCCTCAAAAGGTGATTTTGTC...GGGGCAGTAGTAGAGTGGGCCAGTTGGGACCCACCCGCAGAGCTGAAGAAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp CGTGCTGTCCTTGAACATGTCTTCGGTCCTGGGCATTGTGACCCCAAAGTGTTTAGGCTGAAGTCTGGATaGCACAGGGCATCCGGCCTT +
Preference number: 4 (lower is better)
Translates to: RAVLEHVFGPGHCDPKVFRLKSG*HRASGL
Trigger: AAGGCCGGATGCCCTGTGTCATCCAGACTTCAGCCT...AAACACTTTGGGGTCACAATGCCCAGGACCGAAGACATGTTCAAGGACAGCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp TTAGGGAAGAGCAGAGAGGACATGGCCTGGTCAGGTAGGAGGAAGGGGATAGAGCCTTCACTTGGGCCATaGATGGCACAGGTAACCAAG +
Preference number: 4 (lower is better)
Translates to: LGKSREDMAWSGRRKGIEPSLGP*MAQVTK
Trigger: CTTGGTTACCTGTGCCATTCATGGCCCAAGTGAAGG...CTCTATCCCCTTCCTCCTACCTGACCAGGCCATGTCCTCTCTGCTCTTCCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp ACAGCAAGGATATCCAGGGACTATCCATGTGGCCATAGGGAAGCAAGTGCTGTTCTAGGCCAAGGAGGCTaGTGGGCTTTACCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: TARISRDYPCGHREASAVLGQGG*WALPSW
Trigger: CCAGGAGGGTAAAGCCCATCAGCCTCCTTGGCCTAG...AACAGCACTTGCTTCCCTATGGCCACATGGATAGTCCCTGGATATCCTTGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp GTGTTTCTTCAGCTCTGCGGGTGGGTCCCAACTGGCCCACTCTACTACTGCCCCCTGTTCTGTGAACTGTaGGGTCCAGCTGTTAGTTTT +
Preference number: 4 (lower is better)
Translates to: VFLQLCGWVPTGPLYYCPLFCEL*GPAVSF
Trigger: AAAACTAACAGCTGGACCTCACAGTTCACAGAACAG...GGGGCAGTAGTAGAGTGGGCCAGTTGGGACCCACCCGCAGAGCTGAAGAAACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp AATAAACCCTACTCTCTGCTTGCCTCTAGACTGGGATCCCCAGGGACAGGACACTCCAGACTATCTGGCTaGCCCGAGGAGAAGGTCTCT +
Preference number: 4 (lower is better)
Translates to: NKPYSLLASRLGSPGTGHSRLSG*PEEKVS
Trigger: AGAGACCTTCTCCTCGGGTCAGCCAGATAGTCTGGA...GTGTCCTGTCCCTGGGGATCCCAGTCTAGAGGCAAGCAGAGAGTAGGGTTTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp CTTGCACTTCCGTTGTCTCTTCTTGCAAATAGAGGTGGTGCTGCTAGGGAACTGGTAGGCAGGGGCAGCTaGTGGATAGGCTGTGGGGTA +
Preference number: 4 (lower is better)
Translates to: LALPLSLLANRGGAARELVGRGS*WIGCGV
Trigger: TACCCCACAGCCTATCCAGCAGCTGCCCCTGCCTAC...CAGTTCCCTAGCAGCACCACCTCTATTTGCAAGAAGAGACAACGGAAGTGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR GCA 90 bp AATAAACCCTACTCTCTGCTTGCCTCTAGACTGGGATCCCCAGGGACAGGACACGTGCTGCTAGGGAACTaGTCCAGCACCGGTGTAAGA +
Preference number: 4 (lower is better)
Translates to: NKPYSLLASRLGSPGTGHVLLGN*SSTGVR
Trigger: TCTTACACCGGTGCTGGAGCAGTTCCCTAGCAGCAC...GTGTCCTGTCCCTGGGGATCCCAGTCTAGAGGCAAGCAGAGAGTAGGGTTTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR GCA 90 bp ACAGCAAGGATATCCAGGGACTATCCATGTGGCCATAGGGAAGCAAGTGCTGTTTCCAAGGCCTCGGGATaGTGGGATCCTACCACCCTG +
Preference number: 4 (lower is better)
Translates to: TARISRDYPCGHREASAVSKASG*WDPTTL
Trigger: CAGGGTGGTAGGATCCCAGCATCCCGAGGCCTTGGA...AACAGCACTTGCTTCCCTATGGCCACATGGATAGTCCCTGGATATCCTTGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp TTAGGGAAGAGCAGAGAGGACATGGCCTGGTCAGGTAGGAGGAAGGGGATAGAGAGAGCTTGGCCTGCCTaGAAGCTCTATGGTCAGACA +
Preference number: 4 (lower is better)
Translates to: LGKSREDMAWSGRRKGIERAWPA*KLYGQT
Trigger: TGTCTGACCATAGAGCTTGCAGGCAGGCCAAGCTCT...CTCTATCCCCTTCCTCCTACCTGACCAGGCCATGTCCTCTCTGCTCTTCCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp GGGACTTCAGTCTGTACGTTTTGTACCAACTCACTGGATCTGGACAGTGGGCAGCCTCACCTTCAGAGCTaGCAGCACCCACCTGGAATG +
Preference number: 4 (lower is better)
Translates to: GTSVCTFCTNSLDLDSGQPHLQS*QHPPGM
Trigger: CATTCCAGGTGGGTGCTGGCAGCTCTGAAGGTGAGG...CTGCCCACTGTCCAGATCCAGTGAGTTGGTACAAAACGTACAGACTGAAGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp TTAGGGAAGAGCAGAGAGGACATGGCCTGGTCAGGTAGGAGGAAGGGGATAGAGTGCAATTTCTGTTCCTaGCATCCGCCCCCATGTAGC +
Preference number: 4 (lower is better)
Translates to: LGKSREDMAWSGRRKGIECNFCS*HPPPCS
Trigger: GCTACATGGGGGCGGATGGCAGGAACAGAAATTGCA...CTCTATCCCCTTCCTCCTACCTGACCAGGCCATGTCCTCTCTGCTCTTCCCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp CTTGCACTTCCGTTGTCTCTTCTTGCAAATAGAGGTGGTGCTGCTAGGGAACTGTTCGGCCAGTCCACCTaGTCCTTCTCCTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: LALPLSLLANRGGAARELFGQST*SFSWRW
Trigger: CCACCTCCAGGAGAAGGAGCAGGTGGACTGGCCGAA...CAGTTCCCTAGCAGCACCACCTCTATTTGCAAGAAGAGACAACGGAAGTGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp TGTTTCCTCATTTGTCAATTGACTGTAATAACTCTAACCCTGTCCCTCTCAGGGCAGCCAAGCGCTGGGTaGCGGAGGCTGCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: CFLICQLTVITLTLSLSGQPSAG*RRLLLG
Trigger: GCCCAGCAGCAGCCTCCGGCACCCAGCGCTTGGCTG...CCCTGAGAGGGACAGGGTTAGAGTTATTACAGTCAATTGACAAATGAGGAAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp GGGACTTCAGTCTGTACGTTTTGTACCAACTCACTGGATCTGGACAGTGGGCAGCGGATACCAGCATGCTaGTCACTGTGGGCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: GTSVCTFCTNSLDLDSGQRIPAC*SLWACS
Trigger: GGAACAGGCCCACAGTGAGCAGCATGCTGGTATCCG...CTGCCCACTGTCCAGATCCAGTGAGTTGGTACAAAACGTACAGACTGAAGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp CTTGCACTTCCGTTGTCTCTTCTTGCAAATAGAGGTGGTGCTGCTAGGGAACTGGCATCCTGGGGCCAGTaGTGTAGCTCACTGTCAGGC +
Preference number: 4 (lower is better)
Translates to: LALPLSLLANRGGAARELASWGQ*CSSLSG
Trigger: GCCTGACAGTGAGCTACAGCACTGGCCCCAGGATGC...CAGTTCCCTAGCAGCACCACCTCTATTTGCAAGAAGAGACAACGGAAGTGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp TGGGCCTTTCAAGATTATTACAGACAACTCCAAGTAGCTAGAGGCCTGGCCTTAGCAGCCCCCTTGGCATaGCTGCCTGTGCGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: WAFQDYYRQLQVARGLALAAPLA*LPVRSE
Trigger: CTCTGAGCGCACAGGCAGGCATGCCAAGGGGGCTGC...TAAGGCCAGGCCTCTAGCTACTTGGAGTTGTCTGTAATAATCTTGAAAGGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp TTAGGGAAGAGCAGAGAGGACATGGCCTGGTCAGGTAGGAGGAAGGGGATAGAGGGAAGACGAGTTCTGTaGCCAGGCCTGTTTCATCAG +
Preference number: 4 (lower is better)
Translates to: LGKSREDMAWSGRRKGIEGRRVL*PGLFHQ
Trigger: CTGATGAAACAGGCCTGGCCACAGAACTCGTCTTCC...CTCTATCCCCTTCCTCCTACCTGACCAGGCCATGTCCTCTCTGCTCTTCCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR CCA 90 bp ACTTGGGCCATGAATGGCACAGGTAACCAAGAGCTTGGCCTGCCTGCAAGCTCTTACGCAGGGGTTCCTTaGGCCCTATATGTTGGCATG +
Preference number: 4 (lower is better)
Translates to: TWAMNGTGNQELGLPASSYAGVP*ALYVGM
Trigger: CATGCCAACATATAGGGCCCAAGGAACCCCTGCGTA...AGAGCTTGCAGGCAGGCCAAGCTCTTGGTTACCTGTGCCATTCATGGCCCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CTTTTCCTTCACTATCCTCACCTTCAGAGCTGCCAGCACCCACCTGGAATGTGGTCAGAGGCTGAAGTCTaGATGACACAGGGCATCCGG +
Preference number: 4 (lower is better)
Translates to: LFLHYPHLQSCQHPPGMWSEAEV*MTQGIR
Trigger: CCGGATGCCCTGTGTCATCCAGACTTCAGCCTCTGA...CCACATTCCAGGTGGGTGCTGGCAGCTCTGAAGGTGAGGATAGTGAAGGAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CTTGCACTTCCGTTGTCTCTTCTTGCAAATAGAGGTGGTGCTGCTAGGGAACTGGGCAATCCAGGCTCCTaGCTGAGACTAGCAGGGACC +
Preference number: 4 (lower is better)
Translates to: LALPLSLLANRGGAARELGNPGS*LRLAGT
Trigger: GGTCCCTGCTAGTCTCAGCCAGGAGCCTGGATTGCC...CAGTTCCCTAGCAGCACCACCTCTATTTGCAAGAAGAGACAACGGAAGTGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CCATTATGTTTCAGGCTTTCACTATTTGCAGGCAATCCAGCTCCCAGACTCAAAGCCGGAGGCTGCTGCTaGGCAATCCAGGCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: PLCFRLSLFAGNPAPRLKAGGCC*AIQAPG
Trigger: GCCAGGAGCCTGGATTGCCCAGCAGCAGCCTCCGGC...TTTGAGTCTGGGAGCTGGATTGCCTGCAAATAGTGAAAGCCTGAAACATAATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp TGTTTCCTCATTTGTCAATTGACTGTAATAACTCTAACCCTGTCCCTCTCAGGGGGCCCAGCCAAGCGCTaGGTGCCGGAGGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: CFLICQLTVITLTLSLSGGPAKR*VPEAAA
Trigger: AGCAGCAGCCTCCGGCACCCAGCGCTTGGCTGGGCC...CCCTGAGAGGGACAGGGTTAGAGTTATTACAGTCAATTGACAAATGAGGAAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp TATGCTCTTCAAATGGAATCCAGCCTTCAGATGAACCACTGCAATAAACCCTACCCCCAGAGGGGCTGCTaGCCCAGCCAAGCGCTGGGT +
Preference number: 4 (lower is better)
Translates to: YALQMESSLQMNHCNKPYPQRGC*PSQALG
Trigger: ACCCAGCGCTTGGCTGGGCCAGCAGCCCCTCTGGGG...GTAGGGTTTATTGCAGTGGTTCATCTGAAGGCTGGATTCCATTTGAAGAGCATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp ACTTGGGCCATGAATGGCACAGGTAACCAAGAGCTTGGCCTGCCTGCAAGCTCTTGGGCTTTACCCTCCTaGGAATGGCTAGACAGCTTC +
Preference number: 4 (lower is better)
Translates to: TWAMNGTGNQELGLPASSWALPS*EWLDSF
Trigger: GAAGCTGTCTAGCCATTCCCAGGAGGGTAAAGCCCA...AGAGCTTGCAGGCAGGCCAAGCTCTTGGTTACCTGTGCCATTCATGGCCCAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CTTTTCCTTCACTATCCTCACCTTCAGAGCTGCCAGCACCCACCTGGAATGTGGCCTTTCTCCTCTCTGTaGTTCCACCCCAGCCCACAT +
Preference number: 4 (lower is better)
Translates to: LFLHYPHLQSCQHPPGMWPFSSL*FHPSPH
Trigger: ATGTGGGCTGGGGTGGAACCACAGAGAGGAGAAAGG...CCACATTCCAGGTGGGTGCTGGCAGCTCTGAAGGTGAGGATAGTGAAGGAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp TGTAGCCTGCTCAACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGCTAAGGGGTGCTGGACCTaGGCTCTTCCAGACCACAGC +
Preference number: 4 (lower is better)
Translates to: CSLLNSSEFLPWTTSVYAKGCWT*ALPDHS
Trigger: GCTGTGGTCTGGAAGAGCCCAGGTCCAGCACCCCTT...AGCATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGTTGAGCAGGCTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CTTTTCCTTCACTATCCTCACCTTCAGAGCTGCCAGCACCCACCTGGAATGTGGTCTGGTCCTCACCCATaGGAAAAGCAAGCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: LFLHYPHLQSCQHPPGMWSGPHP*EKQAQG
Trigger: TCCCTGGGCTTGCTTTTCCCATGGGTGAGGACCAGA...CCACATTCCAGGTGGGTGCTGGCAGCTCTGAAGGTGAGGATAGTGAAGGAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CTTGCTGGGGTCAGGCCCAAAGCTGATCTCACCCATTTGATTCCTATGGGCCGGCTCAGAGTCTGGTTCTaGTCCTCACCCATGGGAAAA +
Preference number: 4 (lower is better)
Translates to: LAGVRPKADLTHLIPMGRLRVWF*SSPMGK
Trigger: TTTTCCCATGGGTGAGGACCAGAACCAGACTCTGAG...CCGGCCCATAGGAATCAAATGGGTGAGATCAGCTTTGGGCCTGACCCCAGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp TTAGGGAAGAGCAGAGAGGACATGGCCTGGTCAGGTAGGAGGAAGGGGATAGAGTTGGAACAATTCGGGTaGCCAGGGGTAAGGATGCTC +
Preference number: 4 (lower is better)
Translates to: LGKSREDMAWSGRRKGIELEQFG*PGVRML
Trigger: GAGCATCCTTACCCCTGGCCACCCGAATTGTTCCAA...CTCTATCCCCTTCCTCCTACCTGACCAGGCCATGTCCTCTCTGCTCTTCCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CCCAGGTTCTCAGCCTGGGGTATTAAGCTGCTAATAACACGCCTACATACTCAGACTGGGACCCAAGTCTaGCTTAGGCAGGGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: PRFSAWGIKLLITRLHTQTGTQV*LRQGWP
Trigger: TGGCCAGCCCTGCCTAAGCCAGACTTGGGTCCCAGT...CTGAGTATGTAGGCGTGTTATTAGCAGCTTAATACCCCAGGCTGAGAACCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CCAAGAGCTTGGCCTGCCTGCAAGCTCTATGGTCAGACAGGTGAGTCCTGGCACGATTTCAACTCTGAATaGCCTCACTGTGCTCCCACA +
Preference number: 4 (lower is better)
Translates to: PRAWPACKLYGQTGESWHDFNSE*PHCAPT
Trigger: TGTGGGAGCACAGTGAGGCCATTCAGAGTTGAAATC...GTGCCAGGACTCACCTGTCTGACCATAGAGCTTGCAGGCAGGCCAAGCTCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CAGGGCTGGCCATGGAATGTTGAAGCTGGCCTGCCAGGAATTTTGAAGGCTGGGGCGCGGATGGCTCAATaGATTTCAACTCTGAATGGC +
Preference number: 4 (lower is better)
Translates to: QGWPWNVEAGLPGILKAGARMAQ*ISTLNG
Trigger: GCCATTCAGAGTTGAAATCCATTGAGCCATCCGCGC...CCCAGCCTTCAAAATTCCTGGCAGGCCAGCTTCAACATTCCATGGCCAGCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CAA 72 bp GGGAAAAGCAAGCCCAGGGACTTCAGTCTGTACGTTTaGTACCAACTCACTGGATCTGGACAGTGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: GKSKPRDFSLYV*YQLTGSGQWAG
Trigger: GCCTGCCCACTGTCCAGATCCAGTGAGTTGGTACAAAACGTACAGACTGAAGTCCCTGGGCTTGCTTTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CAA 72 bp AGTCCCAACTCCTGTGTGCCTCGGTTGGCCTTTGGGTaGGACTCAACAGCATGCACCACAGAAGATATCCAC +
Preference number: 4 (lower is better)
Translates to: SPNSCVPRLAFG*DSTACTTEDIH
Trigger: GTGGATATCTTCTGTGGTGCATGCTGTTGAGTCCAACCCAAAGGCCAACCGAGGCACACAGGAGTTGGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp CTTTTCCTTCACTATCCTCACCTTCAGAGCTGCCAGCACCCACCTGGAATGTGGTTCATTGTGGAAGACTaGGGATCCGGTGAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: LFLHYPHLQSCQHPPGMWFIVED*GSGEQL
Trigger: CAGCTGCTCACCGGATCCTCAGTCTTCCACAATGAA...CCACATTCCAGGTGGGTGCTGGCAGCTCTGAAGGTGAGGATAGTGAAGGAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp CCAAGAGCTTGGCCTGCCTGCAAGCTCTATGGTCAGACAGGTGAGTCCTGGCACAATCCAGCCTTCAGATaGACCACTGCAATAAACCCT +
Preference number: 4 (lower is better)
Translates to: PRAWPACKLYGQTGESWHNPAFR*TTAINP
Trigger: AGGGTTTATTGCAGTGGTTCATCTGAAGGCTGGATT...GTGCCAGGACTCACCTGTCTGACCATAGAGCTTGCAGGCAGGCCAAGCTCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp CTTTTCCTTCACTATCCTCACCTTCAGAGCTGCCAGCACCCACCTGGAATGTGGCTCAGGGCGAGTACATaGAAGGCCGTGAAGTGCTTT +
Preference number: 4 (lower is better)
Translates to: LFLHYPHLQSCQHPPGMWLRAST*KAVKCF
Trigger: AAAGCACTTCACGGCCTTTCATGTACTCGCCCTGAG...CCACATTCCAGGTGGGTGCTGGCAGCTCTGAAGGTGAGGATAGTGAAGGAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp TGTAGCCTGCTCAACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCTTGCCTGCCTTCAATaGGACGGCCCTTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: CSLLNSSEFLPWTTSVYALACLQ*DGPSSS
Trigger: AGAGCTGGAAGGGCCGTCTCATTGAAGGCAGGCAAG...AGCATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGTTGAGCAGGCTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp GGGACTTCAGTCTGTACGTTTTGTACCAACTCACTGGATCTGGACAGTGGGCAGGGAGCCAAAACTTGGTaGCCAAGGGGCCTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: GTSVCTFCTNSLDLDSGQGAKTW*PRGLSF
Trigger: AAAGGACAGGCCCCTTGGTCACCAAGTTTTGGCTCC...CTGCCCACTGTCCAGATCCAGTGAGTTGGTACAAAACGTACAGACTGAAGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp ACTTGGGCCATGAATGGCACAGGTAACCAAGAGCTTGGCCTGCCTGCAAGCTCTTTGATATGGAAGCTCTaGGCCTCGCTTAGTCAGTGC +
Preference number: 4 (lower is better)
Translates to: TWAMNGTGNQELGLPASSLIWKL*ASLSQC
Trigger: GCACTGACTAAGCGAGGCTCAGAGCTTCCATATCAA...AGAGCTTGCAGGCAGGCCAAGCTCTTGGTTACCTGTGCCATTCATGGCCCAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp CGTGCTGTCCTTGAACATGTCTTCGGTCCTGGGCATTGTGACCCCAAAGTGTTTCTGGCCATGGAATGTTaGAGCTGGCCTGCCAGGAAT +
Preference number: 4 (lower is better)
Translates to: RAVLEHVFGPGHCDPKVFLAMEC*SWPARN
Trigger: ATTCCTGGCAGGCCAGCTTCAACATTCCATGGCCAG...AAACACTTTGGGGTCACAATGCCCAGGACCGAAGACATGTTCAAGGACAGCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp ACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCTTCAAATGGAATCGGCTGAGGCGGCGATaGCCTTGTCTTCTCCGGAGG +
Preference number: 4 (lower is better)
Translates to: TALSSYPGPHLFMLFKWNRLRRR*PCLLRR
Trigger: CCTCCGGAGAAGACAAGGGCATCGCCGCCTCAGCCG...ATTCCATTTGAAGAGCATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR GCA 90 bp AAAGTGACCCTTGCACTTCCGTTGTCTCTTCTTGCAAATAGAGGTGGTGCTGCTCATGGAGACAGGGTGTaGCCCAATCGCCGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: KVTLALPLSLLANRGGAAHGDRV*PNRRVL
Trigger: CAGCACACGGCGATTGGGGCACACCCTGTCTCCATG...AGCAGCACCACCTCTATTTGCAAGAAGAGACAACGGAAGTGCAAGGGTCACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR GCA 90 bp CCAAGAGCTTGGCCTGCCTGCAAGCTCTATGGTCAGACAGGTGAGTCCTGGCACCAGTTAACATCACTGTaGAAATCAGAAGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: PRAWPACKLYGQTGESWHQLTSL*KSEGPG
Trigger: CCCTGGACCTTCTGATTTGCACAGTGATGTTAACTG...GTGCCAGGACTCACCTGTCTGACCATAGAGCTTGCAGGCAGGCCAAGCTCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp CTGCTCAACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCTTCAAGGGATCCTACCACCCTaGAGCCGCTTGGCAGGTCTA +
Preference number: 4 (lower is better)
Translates to: LLNSSEFLPWTTSVYALQGILPP*SRLAGL
Trigger: TAGACCTGCCAAGCGGCTGCAGGGTGGTAGGATCCC...TTGAAGAGCATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGTTGAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp TTAGGGAAGAGCAGAGAGGACATGGCCTGGTCAGGTAGGAGGAAGGGGATAGAGTTGTCCTCTCTTGCTTaGCTGCCTTCAATGAGACGG +
Preference number: 4 (lower is better)
Translates to: LGKSREDMAWSGRRKGIELSSLA*LPSMRR
Trigger: CCGTCTCATTGAAGGCAGGCAAGCAAGAGAGGACAA...CTCTATCCCCTTCCTCCTACCTGACCAGGCCATGTCCTCTCTGCTCTTCCCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp CTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCTTCAAATGGAATCCAGCCGAGGAGAGAGGGGTTTaGATCCTGGGGCCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: LSSYPGPHLFMLFKWNPAEERGV*ILGPVL
Trigger: CAGCACTGGCCCCAGGATGCAAACCCCTCTCTCCTC...GGCTGGATTCCATTTGAAGAGCATAAACAGATGTGGTCCAGGGTAGGAACTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp CCTTGGGCCTTTCAAGATTATTACAGACAACTCCAAGTAGCTAGAGGCCTGGCCGCCTCGCTTAGTCAGTaGCTCGCTGGGAACCTGGAT +
Preference number: 4 (lower is better)
Translates to: PWAFQDYYRQLQVARGLAASLSQ*LAGNLD
Trigger: ATCCAGGTTCCCAGCGAGGCACTGACTAAGCGAGGC...GGCCAGGCCTCTAGCTACTTGGAGTTGTCTGTAATAATCTTGAAAGGCCCAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp ACAGCAAGGATATCCAGGGACTATCCATGTGGCCATAGGGAAGCAAGTGCTGTTGTGTTTCTTCAGCTCTaGGGGTGGGTCCCAACTGGC +
Preference number: 4 (lower is better)
Translates to: TARISRDYPCGHREASAVVFLQL*GWVPTG
Trigger: GCCAGTTGGGACCCACCCGCAGAGCTGAAGAAACAC...AACAGCACTTGCTTCCCTATGGCCACATGGATAGTCCCTGGATATCCTTGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp CGTGCTGTCCTTGAACATGTCTTCGGTCCTGGGCATTGTGACCCCAAAGTGTTTGTAAAGGACAAACCCTaGAGCCCCCTTGGCATGCCT +
Preference number: 4 (lower is better)
Translates to: RAVLEHVFGPGHCDPKVFVKDKP*SPLGMP
Trigger: AGGCATGCCAAGGGGGCTGCAGGGTTTGTCCTTTAC...AAACACTTTGGGGTCACAATGCCCAGGACCGAAGACATGTTCAAGGACAGCACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp CTTGCACTTCCGTTGTCTCTTCTTGCAAATAGAGGTGGTGCTGCTAGGGAACTGTGGAGATGCTGGTCTTaGTGGGGTCAGGCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: LALPLSLLANRGGAARELWRCWS*WGQAQS
Trigger: GCTTTGGGCCTGACCCCAGCAAGACCAGCATCTCCA...CAGTTCCCTAGCAGCACCACCTCTATTTGCAAGAAGAGACAACGGAAGTGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp AAAGTGACCCTTGCACTTCCGTTGTCTCTTCTTGCAAATAGAGGTGGTGCTGCTTGGTGGGGTACAGGCTaGGATTGTAGGCAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: KVTLALPLSLLANRGGAAWWGTG*DCRQGQ
Trigger: CTGCCCCTGCCTACAATCCCAGCCTGTACCCCACCA...AGCAGCACCACCTCTATTTGCAAGAAGAGACAACGGAAGTGCAAGGGTCACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR CCA 90 bp AATAAACCCTACTCTCTGCTTGCCTCTAGACTGGGATCCCCAGGGACAGGACACGGAAGACGAGTTCTGTaGCCAGGCCTGTTTCATCAG +
Preference number: 4 (lower is better)
Translates to: NKPYSLLASRLGSPGTGHGRRVL*PGLFHQ
Trigger: CTGATGAAACAGGCCTGGCCACAGAACTCGTCTTCC...GTGTCCTGTCCCTGGGGATCCCAGTCTAGAGGCAAGCAGAGAGTAGGGTTTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR CCA 90 bp TGGGCCTTTCAAGATTATTACAGACAACTCCAAGTAGCTAGAGGCCTGGCCTTACTGCCACCATGCCCATaGCCACACCGTTGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: WAFQDYYRQLQVARGLALLPPCP*PHRWSS
Trigger: CGAGGACCAACGGTGTGGCCATGGGCATGGTGGCAG...TAAGGCCAGGCCTCTAGCTACTTGGAGTTGTCTGTAATAATCTTGAAAGGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp AATAAACCCTACTCTCTGCTTGCCTCTAGACTGGGATCCCCAGGGACAGGACACTACGCAGGGGTTCCTTaGGCCCTATATGTTGGCATG +
Preference number: 4 (lower is better)
Translates to: NKPYSLLASRLGSPGTGHYAGVP*ALYVGM
Trigger: CATGCCAACATATAGGGCCCAAGGAACCCCTGCGTA...GTGTCCTGTCCCTGGGGATCCCAGTCTAGAGGCAAGCAGAGAGTAGGGTTTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR CCA 90 bp CCTTGGGCCTTTCAAGATTATTACAGACAACTCCAAGTAGCTAGAGGCCTGGCCAGAGAGGACATGGCCTaGTCAGGTAGGAGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: PWAFQDYYRQLQVARGLAREDMA*SGRRKG
Trigger: CCCCTTCCTCCTACCTGACCAGGCCATGTCCTCTCT...GGCCAGGCCTCTAGCTACTTGGAGTTGTCTGTAATAATCTTGAAAGGCCCAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp GTGTTTCTTCAGCTCTGCGGGTGGGTCCCAACTGGCCCACTCTACTACTGCCCCAGGTGGTTTTGTTCTTaGTCTGTTGCAATGGTTCTC +
Preference number: 4 (lower is better)
Translates to: VFLQLCGWVPTGPLYYCPRWFCS*SVAMVL
Trigger: GAGAACCATTGCAACAGACCAAGAACAAAACCACCT...GGGGCAGTAGTAGAGTGGGCCAGTTGGGACCCACCCGCAGAGCTGAAGAAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp ACTTGGGCCATGAATGGCACAGGTAACCAAGAGCTTGGCCTGCCTGCAAGCTCTCGCCTTTGGAGTCCGTaGAGGAAAAGAGCAGAAACA +
Preference number: 4 (lower is better)
Translates to: TWAMNGTGNQELGLPASSRLWSP*RKRAET
Trigger: TGTTTCTGCTCTTTTCCTCCACGGACTCCAAAGGCG...AGAGCTTGCAGGCAGGCCAAGCTCTTGGTTACCTGTGCCATTCATGGCCCAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CGTGCTGTCCTTGAACATGTCTTCGGTCCTGGGCATTGTGACCCCAAAGTGTTTGTGACTCCCCAAGCTTaGCTAGGCTTGTGGATCTCC +
Preference number: 4 (lower is better)
Translates to: RAVLEHVFGPGHCDPKVFVTPQA*LGLWIS
Trigger: GGAGATCCACAAGCCTAGCCAAGCTTGGGGAGTCAC...AAACACTTTGGGGTCACAATGCCCAGGACCGAAGACATGTTCAAGGACAGCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CTTGCACTTCCGTTGTCTCTTCTTGCAAATAGAGGTGGTGCTGCTAGGGAACTGCTGTCCCCGCTCTCCTaGGCTCAGTCCTTTTGCAGT +
Preference number: 4 (lower is better)
Translates to: LALPLSLLANRGGAARELLSPLS*AQSFCS
Trigger: ACTGCAAAAGGACTGAGCCCAGGAGAGCGGGGACAG...CAGTTCCCTAGCAGCACCACCTCTATTTGCAAGAAGAGACAACGGAAGTGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CCAAGAGCTTGGCCTGCCTGCAAGCTCTATGGTCAGACAGGTGAGTCCTGGCACAGAATTCAAAAGGGTTaGCTGGTAACGAGCCATCTG +
Preference number: 4 (lower is better)
Translates to: PRAWPACKLYGQTGESWHRIQKG*LVTSHL
Trigger: CAGATGGCTCGTTACCAGCCAACCCTTTTGAATTCT...GTGCCAGGACTCACCTGTCTGACCATAGAGCTTGCAGGCAGGCCAAGCTCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp AATAAACCCTACTCTCTGCTTGCCTCTAGACTGGGATCCCCAGGGACAGGACACGGGGTACCTCAAACTTaGAACAATTCGGGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: NKPYSLLASRLGSPGTGHGVPQT*NNSGGQ
Trigger: CTGGCCACCCGAATTGTTCCAAGTTTGAGGTACCCC...GTGTCCTGTCCCTGGGGATCCCAGTCTAGAGGCAAGCAGAGAGTAGGGTTTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp ACAGCAAGGATATCCAGGGACTATCCATGTGGCCATAGGGAAGCAAGTGCTGTTGGACCCCCAGATCTCTaGGAACGGGGTACCTCAAAC +
Preference number: 4 (lower is better)
Translates to: TARISRDYPCGHREASAVGPPDL*ERGTSN
Trigger: GTTTGAGGTACCCCGTTCCCAGAGATCTGGGGGTCC...AACAGCACTTGCTTCCCTATGGCCACATGGATAGTCCCTGGATATCCTTGCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CCAAGAGCTTGGCCTGCCTGCAAGCTCTATGGTCAGACAGGTGAGTCCTGGCACCAGCCAGTAGTGATGTaGGAGAATACAGGATGGAAA +
Preference number: 4 (lower is better)
Translates to: PRAWPACKLYGQTGESWHQPVVM*ENTGWK
Trigger: TTTCCATCCTGTATTCTCCCACATCACTACTGGCTG...GTGCCAGGACTCACCTGTCTGACCATAGAGCTTGCAGGCAGGCCAAGCTCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp GTGTTTCTTCAGCTCTGCGGGTGGGTCCCAACTGGCCCACTCTACTACTGCCCCTTGAAGGCTGGGTCCTaGAACCATATAATGCCTAAT +
Preference number: 4 (lower is better)
Translates to: VFLQLCGWVPTGPLYYCPLKAGS*NHIMPN
Trigger: ATTAGGCATTATATGGTTCCAGGACCCAGCCTTCAA...GGGGCAGTAGTAGAGTGGGCCAGTTGGGACCCACCCGCAGAGCTGAAGAAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp ACTTGGGCCATGAATGGCACAGGTAACCAAGAGCTTGGCCTGCCTGCAAGCTCTTATCAGTGGCTGGAATaGGTAGAGGACCTCTACCAC +
Preference number: 4 (lower is better)
Translates to: TWAMNGTGNQELGLPASSYQWLE*VEDLYH
Trigger: GTGGTAGAGGTCCTCTACCCATTCCAGCCACTGATA...AGAGCTTGCAGGCAGGCCAAGCTCTTGGTTACCTGTGCCATTCATGGCCCAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp GGGACTTCAGTCTGTACGTTTTGTACCAACTCACTGGATCTGGACAGTGGGCAGTCCCCCTGCTATCAGTaGCTGGAATGGGTAGAGGAC +
Preference number: 4 (lower is better)
Translates to: GTSVCTFCTNSLDLDSGQSPCYQ*LEWVED
Trigger: GTCCTCTACCCATTCCAGCCACTGATAGCAGGGGGA...CTGCCCACTGTCCAGATCCAGTGAGTTGGTACAAAACGTACAGACTGAAGTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CCTTGGGCCTTTCAAGATTATTACAGACAACTCCAAGTAGCTAGAGGCCTGGCCGCCTTTAAGTCAGGATaGGGACAGGCCCTTGGGCCT +
Preference number: 4 (lower is better)
Translates to: PWAFQDYYRQLQVARGLAAFKSG*GQALGP
Trigger: AGGCCCAAGGGCCTGTCCCCATCCTGACTTAAAGGC...GGCCAGGCCTCTAGCTACTTGGAGTTGTCTGTAATAATCTTGAAAGGCCCAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CTTGCTGGGGTCAGGCCCAAAGCTGATCTCACCCATTTGATTCCTATGGGCCGGACACAGGCAAGGCCATaGGGCTTTCCAATCTTTACA +
Preference number: 4 (lower is better)
Translates to: LAGVRPKADLTHLIPMGRTQARP*GFPIFT
Trigger: TGTAAAGATTGGAAAGCCCCATGGCCTTGCCTGTGT...CCGGCCCATAGGAATCAAATGGGTGAGATCAGCTTTGGGCCTGACCCCAGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CTTGCTGGGGTCAGGCCCAAAGCTGATCTCACCCATTTGATTCCTATGGGCCGGATCACACACTTAGGGTaGGTGCTGAAGTTGCCACTT +
Preference number: 4 (lower is better)
Translates to: LAGVRPKADLTHLIPMGRITHLG*VLKLPL
Trigger: AAGTGGCAACTTCAGCACCCACCCTAAGTGTGTGAT...CCGGCCCATAGGAATCAAATGGGTGAGATCAGCTTTGGGCCTGACCCCAGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CCAAGAGCTTGGCCTGCCTGCAAGCTCTATGGTCAGACAGGTGAGTCCTGGCACGCTTTATTGCGCGGATaGCTCAATGGATTTCAACTC +
Preference number: 4 (lower is better)
Translates to: PRAWPACKLYGQTGESWHALLRG*LNGFQL
Trigger: GAGTTGAAATCCATTGAGCCATCCGCGCAATAAAGC...GTGCCAGGACTCACCTGTCTGACCATAGAGCTTGCAGGCAGGCCAAGCTCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CAA 72 bp ATGGGTCTCCCAATAGAAAGATGCCTCGTGCTGTCCTaGAACATGTCTTCGGTCCTGGGCATTGTGACCCCA +
Preference number: 4 (lower is better)
Translates to: MGLPIERCLVLS*NMSSVLGIVTP
Trigger: TGGGGTCACAATGCCCAGGACCGAAGACATGTTCAAGGACAGCACGAGGCATCTTTCTATTGGGAGACCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp CTTCAGATGAACCACTGCAATAAACCCTACTCTCTGCTTGCCTCTAGACTGGGACCTGCTCAACAGCTCTaGGTTCCTACCCTGGACCAC +
Preference number: 4 (lower is better)
Translates to: LQMNHCNKPYSLLASRLGPAQQL*VPTLDH
Trigger: GTGGTCCAGGGTAGGAACTCAGAGCTGTTGAGCAGG...TCCCAGTCTAGAGGCAAGCAGAGAGTAGGGTTTATTGCAGTGGTTCATCTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR TCA 90 bp CTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCTTCAAATGGAATCCAGCCCTATGGTCAGACAGGTaGGTCCTGGCACTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: LSSYPGPHLFMLFKWNPALWSDR*VLALGR
Trigger: CCTTCCCAGTGCCAGGACTCACCTGTCTGACCATAG...GGCTGGATTCCATTTGAAGAGCATAAACAGATGTGGTCCAGGGTAGGAACTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp TGGGCCTTTCAAGATTATTACAGACAACTCCAAGTAGCTAGAGGCCTGGCCTTACTAGGCCAAGGAGGCTaGTGGGCTTTACCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: WAFQDYYRQLQVARGLALLGQGG*WALPSW
Trigger: CCAGGAGGGTAAAGCCCATCAGCCTCCTTGGCCTAG...TAAGGCCAGGCCTCTAGCTACTTGGAGTTGTCTGTAATAATCTTGAAAGGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp ACCAGCATGCTGCTCACTGTGGGCCTGTTCCCTTCCATAACCTGTTTCCTCATTAGATGCTTCAGTACGTaGGCCTGTGTGGGGATCAGA +
Preference number: 4 (lower is better)
Translates to: TSMLLTVGLFPSITCFLIRCFST*ACVGIR
Trigger: TCTGATCCCCACACAGGCTCACGTACTGAAGCATCT...AATGAGGAAACAGGTTATGGAAGGGAACAGGCCCACAGTGAGCAGCATGCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp CTTCAGATGAACCACTGCAATAAACCCTACTCTCTGCTTGCCTCTAGACTGGGACTTGCCTGCCTTCAATaGGACGGCCCTTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: LQMNHCNKPYSLLASRLGLACLQ*DGPSSS
Trigger: AGAGCTGGAAGGGCCGTCTCATTGAAGGCAGGCAAG...TCCCAGTCTAGAGGCAAGCAGAGAGTAGGGTTTATTGCAGTGGTTCATCTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp TGTAGCCTGCTCAACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCGGTCCTGGGCATTGTaGCCCCAAAGTGTTTTGTCC +
Preference number: 4 (lower is better)
Translates to: CSLLNSSEFLPWTTSVYARSWAL*PQSVLS
Trigger: GGACAAAACACTTTGGGGTCACAATGCCCAGGACCG...AGCATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGTTGAGCAGGCTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp CCCAGGTTCTCAGCCTGGGGTATTAAGCTGCTAATAACACGCCTACATACTCAGGGAGCCAAAACTTGGTaGCCAAGGGGCCTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: PRFSAWGIKLLITRLHTQGAKTW*PRGLSF
Trigger: AAAGGACAGGCCCCTTGGTCACCAAGTTTTGGCTCC...CTGAGTATGTAGGCGTGTTATTAGCAGCTTAATACCCCAGGCTGAGAACCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp GATGTAGCCTGCTCAACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGTCCAGACTATCTGGCTaGCCCGAGGAGAAGGTCTCT +
Preference number: 4 (lower is better)
Translates to: DVACSTALSSYPGPHLFMSRLSG*PEEKVS
Trigger: AGAGACCTTCTCCTCGGGTCAGCCAGATAGTCTGGA...CATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGTTGAGCAGGCTACATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp ACTTGGGCCATGAATGGCACAGGTAACCAAGAGCTTGGCCTGCCTGCAAGCTCTAATGGATTTCAACTCTaGATGGCCTCACTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: TWAMNGTGNQELGLPASSNGFQL*MASLCS
Trigger: GGAGCACAGTGAGGCCATTCAGAGTTGAAATCCATT...AGAGCTTGCAGGCAGGCCAAGCTCTTGGTTACCTGTGCCATTCATGGCCCAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp CTGCTCAACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCTTCAACTGGGAGGTGGAAGGTaGCTTCAGTGCCACAGGAAG +
Preference number: 4 (lower is better)
Translates to: LLNSSEFLPWTTSVYALQLGGGR*LQCHRK
Trigger: CTTCCTGTGGCACTGAAGGCACCTTCCACCTCCCAG...TTGAAGAGCATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGTTGAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR GCA 90 bp CGTGCTGTCCTTGAACATGTCTTCGGTCCTGGGCATTGTGACCCCAAAGTGTTTACCAAGAGCTTGGCCTaGCTGCAAGCTCTATGGTCA +
Preference number: 4 (lower is better)
Translates to: RAVLEHVFGPGHCDPKVFTKSLA*LQALWS
Trigger: TGACCATAGAGCTTGCAGGCAGGCCAAGCTCTTGGT...AAACACTTTGGGGTCACAATGCCCAGGACCGAAGACATGTTCAAGGACAGCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp AAAGTGACCCTTGCACTTCCGTTGTCTCTTCTTGCAAATAGAGGTGGTGCTGCTCCTCACCTTCAGAGCTaGCAGCACCCACCTGGAATG +
Preference number: 4 (lower is better)
Translates to: KVTLALPLSLLANRGGAAPHLQS*QHPPGM
Trigger: CATTCCAGGTGGGTGCTGGCAGCTCTGAAGGTGAGG...AGCAGCACCACCTCTATTTGCAAGAAGAGACAACGGAAGTGCAAGGGTCACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp CTTTTCCTTCACTATCCTCACCTTCAGAGCTGCCAGCACCCACCTGGAATGTGGTTGTCCTCTCTTGCTTaGCTGCCTTCAATGAGACGG +
Preference number: 4 (lower is better)
Translates to: LFLHYPHLQSCQHPPGMWLSSLA*LPSMRR
Trigger: CCGTCTCATTGAAGGCAGGCAAGCAAGAGAGGACAA...CCACATTCCAGGTGGGTGCTGGCAGCTCTGAAGGTGAGGATAGTGAAGGAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp ACTTGGGCCATGAATGGCACAGGTAACCAAGAGCTTGGCCTGCCTGCAAGCTCTCAGTTCATACAAATCTaGTCAGCTCAGAGACTGGGC +
Preference number: 4 (lower is better)
Translates to: TWAMNGTGNQELGLPASSQFIQI*SAQRLG
Trigger: GCCCAGTCTCTGAGCTGAGCAGATTTGTATGAACTG...AGAGCTTGCAGGCAGGCCAAGCTCTTGGTTACCTGTGCCATTCATGGCCCAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp CTTTTCCTTCACTATCCTCACCTTCAGAGCTGCCAGCACCCACCTGGAATGTGGTCATCCTCCTTGTGCTaGCAGTTAGATGTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: LFLHYPHLQSCQHPPGMWSSSLC*QLDVPL
Trigger: CAGAGGCACATCTAACTGGCAGCACAAGGAGGATGA...CCACATTCCAGGTGGGTGCTGGCAGCTCTGAAGGTGAGGATAGTGAAGGAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp CTTCAGATGAACCACTGCAATAAACCCTACTCTCTGCTTGCCTCTAGACTGGGAGTGTTTCTTCAGCTCTaGGGGTGGGTCCCAACTGGC +
Preference number: 4 (lower is better)
Translates to: LQMNHCNKPYSLLASRLGVFLQL*GWVPTG
Trigger: GCCAGTTGGGACCCACCCGCAGAGCTGAAGAAACAC...TCCCAGTCTAGAGGCAAGCAGAGAGTAGGGTTTATTGCAGTGGTTCATCTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp AAAGTGACCCTTGCACTTCCGTTGTCTCTTCTTGCAAATAGAGGTGGTGCTGCTGTCCCAACTCCTGTGTaGCTCGGTTGGCCTTTGGGT +
Preference number: 4 (lower is better)
Translates to: KVTLALPLSLLANRGGAAVPTPV*LGWPLG
Trigger: ACCCAAAGGCCAACCGAGGCACACAGGAGTTGGGAC...AGCAGCACCACCTCTATTTGCAAGAAGAGACAACGGAAGTGCAAGGGTCACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp AAAGTGACCCTTGCACTTCCGTTGTCTCTTCTTGCAAATAGAGGTGGTGCTGCTTGGAGATGCTGGTCTTaGTGGGGTCAGGCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: KVTLALPLSLLANRGGAAWRCWS*WGQAQS
Trigger: GCTTTGGGCCTGACCCCAGCAAGACCAGCATCTCCA...AGCAGCACCACCTCTATTTGCAAGAAGAGACAACGGAAGTGCAAGGGTCACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp GGGACTTCAGTCTGTACGTTTTGTACCAACTCACTGGATCTGGACAGTGGGCAGGGAGCAGTGTTACTCTaGGTCGGTGGGACCTTGTAT +
Preference number: 4 (lower is better)
Translates to: GTSVCTFCTNSLDLDSGQGAVLL*VGGTLY
Trigger: ATACAAGGTCCCACCGACCCAGAGTAACACTGCTCC...CTGCCCACTGTCCAGATCCAGTGAGTTGGTACAAAACGTACAGACTGAAGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CTGCTCAACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCTTCAAGGAATGCTGTTGGGCTaGACGACCGTGGTATGGTGG +
Preference number: 4 (lower is better)
Translates to: LLNSSEFLPWTTSVYALQGMLLG*TTVVWW
Trigger: CCACCATACCACGGTCGTCCAGCCCAACAGCATTCC...TTGAAGAGCATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGTTGAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp GTGGGAGAATACAGGATGGAAAAGCAGACTTCCACGTATTTTCACTTAACTGCACCATGGCCACACCGTTaGTCCTCGGGGCGGCAACAG +
Preference number: 4 (lower is better)
Translates to: VGEYRMEKQTSTYFHLTAPWPHR*SSGRQQ
Trigger: CTGTTGCCGCCCCGAGGACCAACGGTGTGGCCATGG...TGCAGTTAAGTGAAAATACGTGGAAGTCTGCTTTTCCATCCTGTATTCTCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp ACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCTTCAAATGGAATCTGCCACCATGCCCATaGCCACACCGTTGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: TALSSYPGPHLFMLFKWNLPPCP*PHRWSS
Trigger: CGAGGACCAACGGTGTGGCCATGGGCATGGTGGCAG...ATTCCATTTGAAGAGCATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp AAAGTGACCCTTGCACTTCCGTTGTCTCTTCTTGCAAATAGAGGTGGTGCTGCTCAGGCTTTACCAGTGTaGGGGCACGTAGCTGTACGC +
Preference number: 4 (lower is better)
Translates to: KVTLALPLSLLANRGGAAQALPV*GHVAVR
Trigger: GCGTACAGCTACGTGCCCCCACACTGGTAAAGCCTG...AGCAGCACCACCTCTATTTGCAAGAAGAGACAACGGAAGTGCAAGGGTCACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR CCA 90 bp CTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCTTCAAATGGAATCCAGCCAGAGAGGACATGGCCTaGTCAGGTAGGAGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: LSSYPGPHLFMLFKWNPAREDMA*SGRRKG
Trigger: CCCCTTCCTCCTACCTGACCAGGCCATGTCCTCTCT...GGCTGGATTCCATTTGAAGAGCATAAACAGATGTGGTCCAGGGTAGGAACTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR CCA 90 bp ACTTGGGCCATGAATGGCACAGGTAACCAAGAGCTTGGCCTGCCTGCAAGCTCTCCCAGGTTCTCAGCCTaGGGTATTAAGCTGCTAATA +
Preference number: 4 (lower is better)
Translates to: TWAMNGTGNQELGLPASSPRFSA*GIKLLI
Trigger: TATTAGCAGCTTAATACCCCAGGCTGAGAACCTGGG...AGAGCTTGCAGGCAGGCCAAGCTCTTGGTTACCTGTGCCATTCATGGCCCAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp GGGACTTCAGTCTGTACGTTTTGTACCAACTCACTGGATCTGGACAGTGGGCAGAGCTCCTCATCAGAGTaGGTCCATGACAGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: GTSVCTFCTNSLDLDSGQSSSSE*VHDSSE
Trigger: CTCTGAGCTGTCATGGACCCACTCTGATGAGGAGCT...CTGCCCACTGTCCAGATCCAGTGAGTTGGTACAAAACGTACAGACTGAAGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CTTTTCCTTCACTATCCTCACCTTCAGAGCTGCCAGCACCCACCTGGAATGTGGTGTGGTTCCTTCACTTaGGCCATGAATGGCACAGGT +
Preference number: 4 (lower is better)
Translates to: LFLHYPHLQSCQHPPGMWCGSFT*AMNGTG
Trigger: ACCTGTGCCATTCATGGCCCAAGTGAAGGAACCACA...CCACATTCCAGGTGGGTGCTGGCAGCTCTGAAGGTGAGGATAGTGAAGGAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp GATGTAGCCTGCTCAACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGTCCTTCTCCTGGAGGTaGAGTCAGGTACAGGACGGA +
Preference number: 4 (lower is better)
Translates to: DVACSTALSSYPGPHLFMSFSWR*SQVQDG
Trigger: TCCGTCCTGTACCTGACTCCACCTCCAGGAGAAGGA...CATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGTTGAGCAGGCTACATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp GATGTAGCCTGCTCAACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGGATGAGCCTGTCTCCTaGGCCTCATCCTCATTCTCC +
Preference number: 4 (lower is better)
Translates to: DVACSTALSSYPGPHLFMDEPVS*ASSSFS
Trigger: GGAGAATGAGGATGAGGCCCAGGAGACAGGCTCATC...CATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGTTGAGCAGGCTACATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp TCTGTTTATGCTCTTCAAATGGAATCCAGCCTTCAGATGAACCACTGCAATAAACCCCAGAGGGGCTGCTaGCCCAGCCAAGCGCTGGGT +
Preference number: 4 (lower is better)
Translates to: SVYALQMESSLQMNHCNKPQRGC*PSQALG
Trigger: ACCCAGCGCTTGGCTGGGCCAGCAGCCCCTCTGGGG...TTTATTGCAGTGGTTCATCTGAAGGCTGGATTCCATTTGAAGAGCATAAACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp GTGTTTCTTCAGCTCTGCGGGTGGGTCCCAACTGGCCCACTCTACTACTGCCCCCAAAACCAAAGAGGGTaGAAGGAGGTATTTGCAAAA +
Preference number: 4 (lower is better)
Translates to: VFLQLCGWVPTGPLYYCPQNQRG*KEVFAK
Trigger: TTTTGCAAATACCTCCTTCCACCCTCTTTGGTTTTG...GGGGCAGTAGTAGAGTGGGCCAGTTGGGACCCACCCGCAGAGCTGAAGAAACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CTTGCACTTCCGTTGTCTCTTCTTGCAAATAGAGGTGGTGCTGCTAGGGAACTGCCTTTCTCCTCTCTGTaGTTCCACCCCAGCCCACAT +
Preference number: 4 (lower is better)
Translates to: LALPLSLLANRGGAARELPFSSL*FHPSPH
Trigger: ATGTGGGCTGGGGTGGAACCACAGAGAGGAGAAAGG...CAGTTCCCTAGCAGCACCACCTCTATTTGCAAGAAGAGACAACGGAAGTGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CGTGCTGTCCTTGAACATGTCTTCGGTCCTGGGCATTGTGACCCCAAAGTGTTTAGGATGCTCAGAGTCTaGTTCTGGTCCTCACCCATG +
Preference number: 4 (lower is better)
Translates to: RAVLEHVFGPGHCDPKVFRMLRV*FWSSPM
Trigger: CATGGGTGAGGACCAGAACCAGACTCTGAGCATCCT...AAACACTTTGGGGTCACAATGCCCAGGACCGAAGACATGTTCAAGGACAGCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CTTCAGATGAACCACTGCAATAAACCCTACTCTCTGCTTGCCTCTAGACTGGGAAGGCAGGGCTGGCCATaGAATGTTGAAGCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: LQMNHCNKPYSLLASRLGRQGWP*NVEAGL
Trigger: CAGGCCAGCTTCAACATTCCATGGCCAGCCCTGCCT...TCCCAGTCTAGAGGCAAGCAGAGAGTAGGGTTTATTGCAGTGGTTCATCTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCTTCAAATGGAATCCAGCCAGGCAGGGCTGGCCATaGAATGTTGAAGCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: LSSYPGPHLFMLFKWNPARQGWP*NVEAGL
Trigger: CAGGCCAGCTTCAACATTCCATGGCCAGCCCTGCCT...GGCTGGATTCCATTTGAAGAGCATAAACAGATGTGGTCCAGGGTAGGAACTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp ACAGCAAGGATATCCAGGGACTATCCATGTGGCCATAGGGAAGCAAGTGCTGTTCCTGTGTGCCTCGGTTaGCCTTTGGGTTGGACTCAA +
Preference number: 4 (lower is better)
Translates to: TARISRDYPCGHREASAVPVCLG*PLGWTQ
Trigger: TTGAGTCCAACCCAAAGGCCAACCGAGGCACACAGG...AACAGCACTTGCTTCCCTATGGCCACATGGATAGTCCCTGGATATCCTTGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp ACCAGCATGCTGCTCACTGTGGGCCTGTTCCCTTCCATAACCTGTTTCCTCATTCCCTTTCTAGCTTTGTaGCAGCCAGTCCCAACTCCT +
Preference number: 4 (lower is better)
Translates to: TSMLLTVGLFPSITCFLIPFLAL*QPVPTP
Trigger: AGGAGTTGGGACTGGCTGCCACAAAGCTAGAAAGGG...AATGAGGAAACAGGTTATGGAAGGGAACAGGCCCACAGTGAGCAGCATGCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CCCAGGTTCTCAGCCTGGGGTATTAAGCTGCTAATAACACGCCTACATACTCAGTCCCCCTGCTATCAGTaGCTGGAATGGGTAGAGGAC +
Preference number: 4 (lower is better)
Translates to: PRFSAWGIKLLITRLHTQSPCYQ*LEWVED
Trigger: GTCCTCTACCCATTCCAGCCACTGATAGCAGGGGGA...CTGAGTATGTAGGCGTGTTATTAGCAGCTTAATACCCCAGGCTGAGAACCTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp ACTTGGGCCATGAATGGCACAGGTAACCAAGAGCTTGGCCTGCCTGCAAGCTCTATGGGGACAGGCCCTTaGGCCTTTCAAGATTATTAC +
Preference number: 4 (lower is better)
Translates to: TWAMNGTGNQELGLPASSMGTGP*AFQDYY
Trigger: GTAATAATCTTGAAAGGCCCAAGGGCCTGTCCCCAT...AGAGCTTGCAGGCAGGCCAAGCTCTTGGTTACCTGTGCCATTCATGGCCCAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp CCCAGGTTCTCAGCCTGGGGTATTAAGCTGCTAATAACACGCCTACATACTCAGTTCATTGTGGAAGACTaGGGATCCGGTGAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: PRFSAWGIKLLITRLHTQFIVED*GSGEQL
Trigger: CAGCTGCTCACCGGATCCTCAGTCTTCCACAATGAA...CTGAGTATGTAGGCGTGTTATTAGCAGCTTAATACCCCAGGCTGAGAACCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR TCA 90 bp CTGCTCAACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCTTCAAGTATGGTGGATGACATaGGGCTGGGCAGCATACACC +
Preference number: 4 (lower is better)
Translates to: LLNSSEFLPWTTSVYALQVWWMT*GWAAYT
Trigger: GGTGTATGCTGCCCAGCCTCATGTCATCCACCATAC...TTGAAGAGCATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGTTGAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp CTTTTCCTTCACTATCCTCACCTTCAGAGCTGCCAGCACCCACCTGGAATGTGGGTTGCATACAATGTGTaGCTCCAGATTTGGATGGGC +
Preference number: 4 (lower is better)
Translates to: LFLHYPHLQSCQHPPGMWVAYNV*LQIWMG
Trigger: GCCCATCCAAATCTGGAGTCACACATTGTATGCAAC...CCACATTCCAGGTGGGTGCTGGCAGCTCTGAAGGTGAGGATAGTGAAGGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp TTAGGGAAGAGCAGAGAGGACATGGCCTGGTCAGGTAGGAGGAAGGGGATAGAGAATCCAGCCTTCAGATaGACCACTGCAATAAACCCT +
Preference number: 4 (lower is better)
Translates to: LGKSREDMAWSGRRKGIENPAFR*TTAINP
Trigger: AGGGTTTATTGCAGTGGTTCATCTGAAGGCTGGATT...CTCTATCCCCTTCCTCCTACCTGACCAGGCCATGTCCTCTCTGCTCTTCCCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR TCA 90 bp AAAGTGACCCTTGCACTTCCGTTGTCTCTTCTTGCAAATAGAGGTGGTGCTGCTTTCAAACCAAAGCCATaGGGCAAGCACCGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: KVTLALPLSLLANRGGAAFKPKP*GKHRSS
Trigger: GGAGGAGCGGTGCTTGCCTCATGGCTTTGGTTTGAA...AGCAGCACCACCTCTATTTGCAAGAAGAGACAACGGAAGTGCAAGGGTCACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR TCA 90 bp AAAGTGACCCTTGCACTTCCGTTGTCTCTTCTTGCAAATAGAGGTGGTGCTGCTTGGCTAGACAGCTTCTaGGCTCCTTCCAACCCAAGG +
Preference number: 4 (lower is better)
Translates to: KVTLALPLSLLANRGGAAWLDSF*APSNPR
Trigger: CCTTGGGTTGGAAGGAGCTCAGAAGCTGTCTAGCCA...AGCAGCACCACCTCTATTTGCAAGAAGAGACAACGGAAGTGCAAGGGTCACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp GTGTTTCTTCAGCTCTGCGGGTGGGTCCCAACTGGCCCACTCTACTACTGCCCCGACTTTTCCAAGCCTTaGTTTCCTTATGGATCAAAT +
Preference number: 4 (lower is better)
Translates to: VFLQLCGWVPTGPLYYCPDFSKP*FPYGSN
Trigger: ATTTGATCCATAAGGAAATCAAGGCTTGGAAAAGTC...GGGGCAGTAGTAGAGTGGGCCAGTTGGGACCCACCCGCAGAGCTGAAGAAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp TGTTTCCTCATTTGTCAATTGACTGTAATAACTCTAACCCTGTCCCTCTCAGGGCCTACCAGAGGCACATaGCTGTCCCCGCTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: CFLICQLTVITLTLSLSGPTRGT*LSPLSW
Trigger: CCAGGAGAGCGGGGACAGTCATGTGCCTCTGGTAGG...CCCTGAGAGGGACAGGGTTAGAGTTATTACAGTCAATTGACAAATGAGGAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp AAAGTGACCCTTGCACTTCCGTTGTCTCTTCTTGCAAATAGAGGTGGTGCTGCTCAGACTCAAACTTCTTaGCCCCAGGCCAGTGAGGAG +
Preference number: 4 (lower is better)
Translates to: KVTLALPLSLLANRGGAAQTQTS*PQASEE
Trigger: CTCCTCACTGGCCTGGGGTCAAGAAGTTTGAGTCTG...AGCAGCACCACCTCTATTTGCAAGAAGAGACAACGGAAGTGCAAGGGTCACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp CTTGCTGGGGTCAGGCCCAAAGCTGATCTCACCCATTTGATTCCTATGGGCCGGAAAGAGCAGAGGATTTaGAGAATCACTTCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: LAGVRPKADLTHLIPMGRKEQRI*RITSKL
Trigger: CAGCTTGGAAGTGATTCTTCAAATCCTCTGCTCTTT...CCGGCCCATAGGAATCAAATGGGTGAGATCAGCTTTGGGCCTGACCCCAGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp ACTTGGGCCATGAATGGCACAGGTAACCAAGAGCTTGGCCTGCCTGCAAGCTCTCATGTGATTCCTTTCTaGAGGCCATCAGAACAAAGC +
Preference number: 4 (lower is better)
Translates to: TWAMNGTGNQELGLPASSHVIPF*RPSEQS
Trigger: GCTTTGTTCTGATGGCCTTCAGAAAGGAATCACATG...AGAGCTTGCAGGCAGGCCAAGCTCTTGGTTACCTGTGCCATTCATGGCCCAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp CCCAGGTTCTCAGCCTGGGGTATTAAGCTGCTAATAACACGCCTACATACTCAGGGAAGGTGCCTTCAGTaGCACAGGAAGACGAGTTCT +
Preference number: 4 (lower is better)
Translates to: PRFSAWGIKLLITRLHTQGRCLQ*HRKTSS
Trigger: AGAACTCGTCTTCCTGTGGCACTGAAGGCACCTTCC...CTGAGTATGTAGGCGTGTTATTAGCAGCTTAATACCCCAGGCTGAGAACCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR GCA 90 bp CTTGCACTTCCGTTGTCTCTTCTTGCAAATAGAGGTGGTGCTGCTAGGGAACTGGGAAGGTGCCTTCAGTaGCACAGGAAGACGAGTTCT +
Preference number: 4 (lower is better)
Translates to: LALPLSLLANRGGAARELGRCLQ*HRKTSS
Trigger: AGAACTCGTCTTCCTGTGGCACTGAAGGCACCTTCC...CAGTTCCCTAGCAGCACCACCTCTATTTGCAAGAAGAGACAACGGAAGTGCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR GCA 90 bp TGTTTCCTCATTTGTCAATTGACTGTAATAACTCTAACCCTGTCCCTCTCAGGGCGGGGCGGCAACAGGTaGTGGGTAGATAGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: CFLICQLTVITLTLSLSGRGGNR*WVDSRG
Trigger: CCCTCTGCTATCTACCCAGCACCTGTTGCCGCCCCG...CCCTGAGAGGGACAGGGTTAGAGTTATTACAGTCAATTGACAAATGAGGAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp ACTTGGGCCATGAATGGCACAGGTAACCAAGAGCTTGGCCTGCCTGCAAGCTCTCAGTTAACATCACTGTaGAAATCAGAAGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: TWAMNGTGNQELGLPASSQLTSL*KSEGPG
Trigger: CCCTGGACCTTCTGATTTGCACAGTGATGTTAACTG...AGAGCTTGCAGGCAGGCCAAGCTCTTGGTTACCTGTGCCATTCATGGCCCAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp GTGGGAGAATACAGGATGGAAAAGCAGACTTCCACGTATTTTCACTTAACTGCACCCCCATGTAGCCTCTaGCCAGTCTTCAACCCCCGC +
Preference number: 4 (lower is better)
Translates to: VGEYRMEKQTSTYFHLTAPPCSL*PVFNPR
Trigger: GCGGGGGTTGAAGACTGGGCAGAGGCTACATGGGGG...TGCAGTTAAGTGAAAATACGTGGAAGTCTGCTTTTCCATCCTGTATTCTCCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp TGTAGCCTGCTCAACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGCTTGCAATTTCTGTTCCTaGCATCCGCCCCCATGTAGC +
Preference number: 4 (lower is better)
Translates to: CSLLNSSEFLPWTTSVYACNFCS*HPPPCS
Trigger: GCTACATGGGGGCGGATGGCAGGAACAGAAATTGCA...AGCATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGTTGAGCAGGCTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp AATAAACCCTACTCTCTGCTTGCCTCTAGACTGGGATCCCCAGGGACAGGACACACCACAGCCTTTCAGTaGCTTATTTTCACCTTGGGG +
Preference number: 4 (lower is better)
Translates to: NKPYSLLASRLGSPGTGHTTAFQ*LIFTLG
Trigger: CCCCAAGGTGAAAATAAGGCACTGAAAGGCTGTGGT...GTGTCCTGTCCCTGGGGATCCCAGTCTAGAGGCAAGCAGAGAGTAGGGTTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp CCCAGGTTCTCAGCCTGGGGTATTAAGCTGCTAATAACACGCCTACATACTCAGTGGGCTCAGTCCTTTTaGAGTGACTCCCCAAGCTTG +
Preference number: 4 (lower is better)
Translates to: PRFSAWGIKLLITRLHTQWAQSF*SDSPSL
Trigger: CAAGCTTGGGGAGTCACTGCAAAAGGACTGAGCCCA...CTGAGTATGTAGGCGTGTTATTAGCAGCTTAATACCCCAGGCTGAGAACCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp CGTGCTGTCCTTGAACATGTCTTCGGTCCTGGGCATTGTGACCCCAAAGTGTTTTCATCCTCCTTGTGCTaGCAGTTAGATGTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: RAVLEHVFGPGHCDPKVFSSSLC*QLDVPL
Trigger: CAGAGGCACATCTAACTGGCAGCACAAGGAGGATGA...AAACACTTTGGGGTCACAATGCCCAGGACCGAAGACATGTTCAAGGACAGCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp TATGCTCTTCAAATGGAATCCAGCCTTCAGATGAACCACTGCAATAAACCCTACTGGCATGCCTGCCTGTaGGCTCAGAGGCTCCGGTGT +
Preference number: 4 (lower is better)
Translates to: YALQMESSLQMNHCNKPYWHACL*AQRLRC
Trigger: ACACCGGAGCCTCTGAGCGCACAGGCAGGCATGCCA...GTAGGGTTTATTGCAGTGGTTCATCTGAAGGCTGGATTCCATTTGAAGAGCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp TGTAGCCTGCTCAACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCGGTGGGACCTTGTATaGTGTCCCCGCAGTATATCT +
Preference number: 4 (lower is better)
Translates to: CSLLNSSEFLPWTTSVYARWDLV*CPRSIS
Trigger: AGATATACTGCGGGGACACCATACAAGGTCCCACCG...AGCATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGTTGAGCAGGCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCTTCAAATGGAATCCAGCCCAGAGGGAATGCTGTTaGGCTGGACGACCGTGGTAT +
Preference number: 4 (lower is better)
Translates to: LSSYPGPHLFMLFKWNPAQRECC*AGRPWY
Trigger: ATACCACGGTCGTCCAGCCCAACAGCATTCCCTCTG...GGCTGGATTCCATTTGAAGAGCATAAACAGATGTGGTCCAGGGTAGGAACTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp TGTAGCCTGCTCAACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCCCTATATGTTGGCATaGAGACAGGGTGTGCCCCAA +
Preference number: 4 (lower is better)
Translates to: CSLLNSSEFLPWTTSVYAPYMLA*RQGVPQ
Trigger: TTGGGGCACACCCTGTCTCCATGCCAACATATAGGG...AGCATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGTTGAGCAGGCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR CCA 90 bp GATGTAGCCTGCTCAACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGTACGCAGGGGTTCCTTaGGCCCTATATGTTGGCATG +
Preference number: 4 (lower is better)
Translates to: DVACSTALSSYPGPHLFMYAGVP*ALYVGM
Trigger: CATGCCAACATATAGGGCCCAAGGAACCCCTGCGTA...CATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGTTGAGCAGGCTACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR CCA 90 bp CTTGCTGGGGTCAGGCCCAAAGCTGATCTCACCCATTTGATTCCTATGGGCCGGTTTGTGTCTGGGACATaGGAATGTCCTGAACTAATC +
Preference number: 4 (lower is better)
Translates to: LAGVRPKADLTHLIPMGRFVSGT*ECPELI
Trigger: GATTAGTTCAGGACATTCCCATGTCCCAGACACAAA...CCGGCCCATAGGAATCAAATGGGTGAGATCAGCTTTGGGCCTGACCCCAGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp ACCAGCATGCTGCTCACTGTGGGCCTGTTCCCTTCCATAACCTGTTTCCTCATTTGTGGTTCCTTCACTTaGGCCATGAATGGCACAGGT +
Preference number: 4 (lower is better)
Translates to: TSMLLTVGLFPSITCFLICGSFT*AMNGTG
Trigger: ACCTGTGCCATTCATGGCCCAAGTGAAGGAACCACA...AATGAGGAAACAGGTTATGGAAGGGAACAGGCCCACAGTGAGCAGCATGCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CTTCAGATGAACCACTGCAATAAACCCTACTCTCTGCTTGCCTCTAGACTGGGAACCTGCTCCTTCTCCTaGAGGTGGAGTCAGGTACAG +
Preference number: 4 (lower is better)
Translates to: LQMNHCNKPYSLLASRLGTCSFS*RWSQVQ
Trigger: CTGTACCTGACTCCACCTCCAGGAGAAGGAGCAGGT...TCCCAGTCTAGAGGCAAGCAGAGAGTAGGGTTTATTGCAGTGGTTCATCTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CTGCTCAACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCTTCAAGATGAGCCTGTCTCCTaGGCCTCATCCTCATTCTCC +
Preference number: 4 (lower is better)
Translates to: LLNSSEFLPWTTSVYALQDEPVS*ASSSFS
Trigger: GGAGAATGAGGATGAGGCCCAGGAGACAGGCTCATC...TTGAAGAGCATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGTTGAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CCATTATGTTTCAGGCTTTCACTATTTGCAGGCAATCCAGCTCCCAGACTCAAAGGCAATCCAGGCTCCTaGCTGAGACTAGCAGGGACC +
Preference number: 4 (lower is better)
Translates to: PLCFRLSLFAGNPAPRLKGNPGS*LRLAGT
Trigger: GGTCCCTGCTAGTCTCAGCCAGGAGCCTGGATTGCC...TTTGAGTCTGGGAGCTGGATTGCCTGCAAATAGTGAAAGCCTGAAACATAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp GGGACTTCAGTCTGTACGTTTTGTACCAACTCACTGGATCTGGACAGTGGGCAGGGAGACATGGGAGGTTaGGGTAAGGATATGTCCAAG +
Preference number: 4 (lower is better)
Translates to: GTSVCTFCTNSLDLDSGQGDMGG*GKDMSK
Trigger: CTTGGACATATCCTTACCCCAACCTCCCATGTCTCC...CTGCCCACTGTCCAGATCCAGTGAGTTGGTACAAAACGTACAGACTGAAGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCTTCAAATGGAATCCAGCCGGTCCTAAAGTTCCTTaGAAGCCCAGGAAGGTGGGC +
Preference number: 4 (lower is better)
Translates to: LSSYPGPHLFMLFKWNPAGPKVP*KPRKVG
Trigger: GCCCACCTTCCTGGGCTTCCAAGGAACTTTAGGACC...GGCTGGATTCCATTTGAAGAGCATAAACAGATGTGGTCCAGGGTAGGAACTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp ACTTGGGCCATGAATGGCACAGGTAACCAAGAGCTTGGCCTGCCTGCAAGCTCTAGAATTCAAAAGGGTTaGCTGGTAACGAGCCATCTG +
Preference number: 4 (lower is better)
Translates to: TWAMNGTGNQELGLPASSRIQKG*LVTSHL
Trigger: CAGATGGCTCGTTACCAGCCAACCCTTTTGAATTCT...AGAGCTTGCAGGCAGGCCAAGCTCTTGGTTACCTGTGCCATTCATGGCCCAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp GTGGGAGAATACAGGATGGAAAAGCAGACTTCCACGTATTTTCACTTAACTGCACTGGATTCCCAAGCTTaGCAAGCAGCGGGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: VGEYRMEKQTSTYFHLTALDSQA*QAAGAA
Trigger: TGCGGCCCCCGCTGCTTGCCAAGCTTGGGAATCCAG...TGCAGTTAAGTGAAAATACGTGGAAGTCTGCTTTTCCATCCTGTATTCTCCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp TGTTTCCTCATTTGTCAATTGACTGTAATAACTCTAACCCTGTCCCTCTCAGGGGGGGTCTGGAGATGCTaGTCTTGCTGGGGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: CFLICQLTVITLTLSLSGGVWRC*SCWGQA
Trigger: GGCCTGACCCCAGCAAGACCAGCATCTCCAGACCCC...CCCTGAGAGGGACAGGGTTAGAGTTATTACAGTCAATTGACAAATGAGGAAACA
51% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp TTAGGGAAGAGCAGAGAGGACATGGCCTGGTCAGGTAGGAGGAAGGGGATAGAGCATCAGCAGAGTTGCTaGAGCATAACTGGGACTATT +
Preference number: 4 (lower is better)
Translates to: LGKSREDMAWSGRRKGIEHQQSC*SITGTI
Trigger: AATAGTCCCAGTTATGCTCCAGCAACTCTGCTGATG...CTCTATCCCCTTCCTCCTACCTGACCAGGCCATGTCCTCTCTGCTCTTCCCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356467.5
ENST00000450446.6
3UTR CAA 72 bp GACTATCCATGTGGCCATAGGGAAGCAAGTGCTGTTTaGTCCCTTTCTAGCTTTGTGGCAGCCAGTCCCAAC +
Preference number: 4 (lower is better)
Translates to: DYPCGHREASAV*SLSSFVAASPN
Trigger: GTTGGGACTGGCTGCCACAAAGCTAGAAAGGGACAAAACAGCACTTGCTTCCCTATGGCCACATGGATAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp CCATTATGTTTCAGGCTTTCACTATTTGCAGGCAATCCAGCTCCCAGACTCAAAAGACTGAGGATCCGGTaGGCAGCTGCAGGCGAAAAC +
Preference number: 4 (lower is better)
Translates to: PLCFRLSLFAGNPAPRLKRLRIR*AAAGEN
Trigger: GTTTTCGCCTGCAGCTGCTCACCGGATCCTCAGTCT...TTTGAGTCTGGGAGCTGGATTGCCTGCAAATAGTGAAAGCCTGAAACATAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp AATAAACCCTACTCTCTGCTTGCCTCTAGACTGGGATCCCCAGGGACAGGACACCACCGGTGTAAGACTTaGGTAGTTGCATACAATGTG +
Preference number: 4 (lower is better)
Translates to: NKPYSLLASRLGSPGTGHHRCKT*VVAYNV
Trigger: CACATTGTATGCAACTACTCAAGTCTTACACCGGTG...GTGTCCTGTCCCTGGGGATCCCAGTCTAGAGGCAAGCAGAGAGTAGGGTTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR TCA 90 bp AATAAACCCTACTCTCTGCTTGCCTCTAGACTGGGATCCCCAGGGACAGGACACAATCCAGCCTTCAGATaGACCACTGCAATAAACCCT +
Preference number: 4 (lower is better)
Translates to: NKPYSLLASRLGSPGTGHNPAFR*TTAINP
Trigger: AGGGTTTATTGCAGTGGTTCATCTGAAGGCTGGATT...GTGTCCTGTCCCTGGGGATCCCAGTCTAGAGGCAAGCAGAGAGTAGGGTTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR TCA 90 bp CCATTATGTTTCAGGCTTTCACTATTTGCAGGCAATCCAGCTCCCAGACTCAAACCTGCTCAACAGCTCTaGGTTCCTACCCTGGACCAC +
Preference number: 4 (lower is better)
Translates to: PLCFRLSLFAGNPAPRLKPAQQL*VPTLDH
Trigger: GTGGTCCAGGGTAGGAACTCAGAGCTGTTGAGCAGG...TTTGAGTCTGGGAGCTGGATTGCCTGCAAATAGTGAAAGCCTGAAACATAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp CCATTATGTTTCAGGCTTTCACTATTTGCAGGCAATCCAGCTCCCAGACTCAAAAGGCTGAAGTCTGGATaGCACAGGGCATCCGGCCTT +
Preference number: 4 (lower is better)
Translates to: PLCFRLSLFAGNPAPRLKRLKSG*HRASGL
Trigger: AAGGCCGGATGCCCTGTGTCATCCAGACTTCAGCCT...TTTGAGTCTGGGAGCTGGATTGCCTGCAAATAGTGAAAGCCTGAAACATAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp CTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCTTCAAATGGAATCCAGCCCTCAGGGCGAGTACATaGAAGGCCGTGAAGTGCTTT +
Preference number: 4 (lower is better)
Translates to: LSSYPGPHLFMLFKWNPALRAST*KAVKCF
Trigger: AAAGCACTTCACGGCCTTTCATGTACTCGCCCTGAG...GGCTGGATTCCATTTGAAGAGCATAAACAGATGTGGTCCAGGGTAGGAACTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp CTTTTCCTTCACTATCCTCACCTTCAGAGCTGCCAGCACCCACCTGGAATGTGGCTGTTCTGTGAACTGTaGGGTCCAGCTGTTAGTTTT +
Preference number: 4 (lower is better)
Translates to: LFLHYPHLQSCQHPPGMWLFCEL*GPAVSF
Trigger: AAAACTAACAGCTGGACCTCACAGTTCACAGAACAG...CCACATTCCAGGTGGGTGCTGGCAGCTCTGAAGGTGAGGATAGTGAAGGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp GGGACTTCAGTCTGTACGTTTTGTACCAACTCACTGGATCTGGACAGTGGGCAGTGTTCAACTGTTCTGTaGACTGTGAGGTCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: GTSVCTFCTNSLDLDSGQCSTVL*TVRSSC
Trigger: ACAGCTGGACCTCACAGTTCACAGAACAGTTGAACA...CTGCCCACTGTCCAGATCCAGTGAGTTGGTACAAAACGTACAGACTGAAGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp TCAGGAGACATTTCATTTGTGTCTGGGACATGGGAATGTCCTGAACTAATCTTGGAGGCTGAGGCCGGCTaGACTGGGGCTCATACTGAA +
Preference number: 4 (lower is better)
Translates to: SGDISFVSGTWECPELILEAEAG*TGAHTE
Trigger: TTCAGTATGAGCCCCAGTTCAGCCGGCCTCAGCCTC...CAAGATTAGTTCAGGACATTCCCATGTCCCAGACACAAATGAAATGTCTCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp CCCAGGTTCTCAGCCTGGGGTATTAAGCTGCTAATAACACGCCTACATACTCAGTTGATATGGAAGCTCTaGGCCTCGCTTAGTCAGTGC +
Preference number: 4 (lower is better)
Translates to: PRFSAWGIKLLITRLHTQLIWKL*ASLSQC
Trigger: GCACTGACTAAGCGAGGCTCAGAGCTTCCATATCAA...CTGAGTATGTAGGCGTGTTATTAGCAGCTTAATACCCCAGGCTGAGAACCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp CTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCTTCAAATGGAATCCAGCCGGTCAGGCCCAAAGCTaGTCTCACCCATTTGATTCC +
Preference number: 4 (lower is better)
Translates to: LSSYPGPHLFMLFKWNPAGQAQS*SHPFDS
Trigger: GGAATCAAATGGGTGAGATCAGCTTTGGGCCTGACC...GGCTGGATTCCATTTGAAGAGCATAAACAGATGTGGTCCAGGGTAGGAACTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp AAAGTGACCCTTGCACTTCCGTTGTCTCTTCTTGCAAATAGAGGTGGTGCTGCTGGAAGGTGCCTTCAGTaGCACAGGAAGACGAGTTCT +
Preference number: 4 (lower is better)
Translates to: KVTLALPLSLLANRGGAAGRCLQ*HRKTSS
Trigger: AGAACTCGTCTTCCTGTGGCACTGAAGGCACCTTCC...AGCAGCACCACCTCTATTTGCAAGAAGAGACAACGGAAGTGCAAGGGTCACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR GCA 90 bp CCCAGGTTCTCAGCCTGGGGTATTAAGCTGCTAATAACACGCCTACATACTCAGGAAAGCCGCAGAGGATaGTTGGTAAGTTCGGTTCTC +
Preference number: 4 (lower is better)
Translates to: PRFSAWGIKLLITRLHTQESRRG*LVSSVL
Trigger: GAGAACCGAACTTACCAAGCATCCTCTGCGGCTTTC...CTGAGTATGTAGGCGTGTTATTAGCAGCTTAATACCCCAGGCTGAGAACCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR GCA 90 bp CTTCAGATGAACCACTGCAATAAACCCTACTCTCTGCTTGCCTCTAGACTGGGACAGATTTGGATGGGCTaGAGGCTTTACCAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: LQMNHCNKPYSLLASRLGQIWMG*RLYQCG
Trigger: CCCACACTGGTAAAGCCTGCAGCCCATCCAAATCTG...TCCCAGTCTAGAGGCAAGCAGAGAGTAGGGTTTATTGCAGTGGTTCATCTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR GCA 90 bp TTAGGGAAGAGCAGAGAGGACATGGCCTGGTCAGGTAGGAGGAAGGGGATAGAGCTTCAGATGAACCACTaGAATAAACCCTACTCTCTG +
Preference number: 4 (lower is better)
Translates to: LGKSREDMAWSGRRKGIELQMNH*NKPYSL
Trigger: CAGAGAGTAGGGTTTATTGCAGTGGTTCATCTGAAG...CTCTATCCCCTTCCTCCTACCTGACCAGGCCATGTCCTCTCTGCTCTTCCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR GCA 90 bp CTTGCACTTCCGTTGTCTCTTCTTGCAAATAGAGGTGGTGCTGCTAGGGAACTGCCTAGAGATGTAGCCTaGTCAACAGCTCTGAGTTCC +
Preference number: 4 (lower is better)
Translates to: LALPLSLLANRGGAARELPRDVA*STALSS
Trigger: GGAACTCAGAGCTGTTGAGCAGGCTACATCTCTAGG...CAGTTCCCTAGCAGCACCACCTCTATTTGCAAGAAGAGACAACGGAAGTGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR GCA 90 bp CTTCAGATGAACCACTGCAATAAACCCTACTCTCTGCTTGCCTCTAGACTGGGAACCAAGAGCTTGGCCTaGCTGCAAGCTCTATGGTCA +
Preference number: 4 (lower is better)
Translates to: LQMNHCNKPYSLLASRLGTKSLA*LQALWS
Trigger: TGACCATAGAGCTTGCAGGCAGGCCAAGCTCTTGGT...TCCCAGTCTAGAGGCAAGCAGAGAGTAGGGTTTATTGCAGTGGTTCATCTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp ACTTGGGCCATGAATGGCACAGGTAACCAAGAGCTTGGCCTGCCTGCAAGCTCTACCAGGTATGGGCGCTaGCGACTTAATTTTTACAAA +
Preference number: 4 (lower is better)
Translates to: TWAMNGTGNQELGLPASSTRYGR*RLNFYK
Trigger: TTTGTAAAAATTAAGTCGGCAGCGCCCATACCTGGT...AGAGCTTGCAGGCAGGCCAAGCTCTTGGTTACCTGTGCCATTCATGGCCCAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp TTAGGGAAGAGCAGAGAGGACATGGCCTGGTCAGGTAGGAGGAAGGGGATAGAGACCAGGTATGGGCGCTaGCGACTTAATTTTTACAAA +
Preference number: 4 (lower is better)
Translates to: LGKSREDMAWSGRRKGIETRYGR*RLNFYK
Trigger: TTTGTAAAAATTAAGTCGGCAGCGCCCATACCTGGT...CTCTATCCCCTTCCTCCTACCTGACCAGGCCATGTCCTCTCTGCTCTTCCCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp ACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCTTCAAATGGAATCGGATACCAGCATGCTaGTCACTGTGGGCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: TALSSYPGPHLFMLFKWNRIPAC*SLWACS
Trigger: GGAACAGGCCCACAGTGAGCAGCATGCTGGTATCCG...ATTCCATTTGAAGAGCATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp GATGTAGCCTGCTCAACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGATACTGAAAAAGGGGTaGTGGACCTGGGCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: DVACSTALSSYPGPHLFMILKKG*WTWALP
Trigger: TGGAAGAGCCCAGGTCCAGCACCCCTTTTTCAGTAT...CATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGTTGAGCAGGCTACATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp CGTGCTGTCCTTGAACATGTCTTCGGTCCTGGGCATTGTGACCCCAAAGTGTTTCTCCCAATAGAAAGATaGCTCGTGCTGTCCTTGAAC +
Preference number: 4 (lower is better)
Translates to: RAVLEHVFGPGHCDPKVFLPIER*LVLSLN
Trigger: GTTCAAGGACAGCACGAGGCATCTTTCTATTGGGAG...AAACACTTTGGGGTCACAATGCCCAGGACCGAAGACATGTTCAAGGACAGCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp CCTTGGGCCTTTCAAGATTATTACAGACAACTCCAAGTAGCTAGAGGCCTGGCCTTAGGAAGCCAGGTGTaGAGGCTTACCAAGGACATG +
Preference number: 4 (lower is better)
Translates to: PWAFQDYYRQLQVARGLALGSQV*RLTKDM
Trigger: CATGTCCTTGGTAAGCCTGCACACCTGGCTTCCTAA...GGCCAGGCCTCTAGCTACTTGGAGTTGTCTGTAATAATCTTGAAAGGCCCAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp ACAGCAAGGATATCCAGGGACTATCCATGTGGCCATAGGGAAGCAAGTGCTGTTTTAGGAAGCCAGGTGTaGAGGCTTACCAAGGACATG +
Preference number: 4 (lower is better)
Translates to: TARISRDYPCGHREASAVLGSQV*RLTKDM
Trigger: CATGTCCTTGGTAAGCCTGCACACCTGGCTTCCTAA...AACAGCACTTGCTTCCCTATGGCCACATGGATAGTCCCTGGATATCCTTGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp TCTGTTTATGCTCTTCAAATGGAATCCAGCCTTCAGATGAACCACTGCAATAAAGCAGCCCCCTTGGCATaGCTGCCTGTGCGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: SVYALQMESSLQMNHCNKAAPLA*LPVRSE
Trigger: CTCTGAGCGCACAGGCAGGCATGCCAAGGGGGCTGC...TTTATTGCAGTGGTTCATCTGAAGGCTGGATTCCATTTGAAGAGCATAAACAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp TGGGCCTTTCAAGATTATTACAGACAACTCCAAGTAGCTAGAGGCCTGGCCTTAGTAAAGGACAAACCCTaGAGCCCCCTTGGCATGCCT +
Preference number: 4 (lower is better)
Translates to: WAFQDYYRQLQVARGLALVKDKP*SPLGMP
Trigger: AGGCATGCCAAGGGGGCTGCAGGGTTTGTCCTTTAC...TAAGGCCAGGCCTCTAGCTACTTGGAGTTGTCTGTAATAATCTTGAAAGGCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp CCTTGGGCCTTTCAAGATTATTACAGACAACTCCAAGTAGCTAGAGGCCTGGCCGAAGGAAAATCCCCCTaGTATCAGTGGCTGGAATGG +
Preference number: 4 (lower is better)
Translates to: PWAFQDYYRQLQVARGLAEGKSP*YQWLEW
Trigger: CCATTCCAGCCACTGATAGCAGGGGGATTTTCCTTC...GGCCAGGCCTCTAGCTACTTGGAGTTGTCTGTAATAATCTTGAAAGGCCCAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp ACTTGGGCCATGAATGGCACAGGTAACCAAGAGCTTGGCCTGCCTGCAAGCTCTTATGGGCCGGTACTTTaGAAAGCTGTTACATCTGTT +
Preference number: 4 (lower is better)
Translates to: TWAMNGTGNQELGLPASSYGPVL*KAVTSV
Trigger: AACAGATGTAACAGCTTTGCAAAGTACCGGCCCATA...AGAGCTTGCAGGCAGGCCAAGCTCTTGGTTACCTGTGCCATTCATGGCCCAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp TCAGGAGACATTTCATTTGTGTCTGGGACATGGGAATGTCCTGAACTAATCTTGTGGTGGGGTACAGGCTaGGATTGTAGGCAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: SGDISFVSGTWECPELILWWGTG*DCRQGQ
Trigger: CTGCCCCTGCCTACAATCCCAGCCTGTACCCCACCA...CAAGATTAGTTCAGGACATTCCCATGTCCCAGACACAAATGAAATGTCTCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR CCA 90 bp CCCAGGTTCTCAGCCTGGGGTATTAAGCTGCTAATAACACGCCTACATACTCAGAACTGGGACTATTGGTaGGGTACAGGCTGGGATTGT +
Preference number: 4 (lower is better)
Translates to: PRFSAWGIKLLITRLHTQNWDYW*GTGWDC
Trigger: ACAATCCCAGCCTGTACCCCACCAATAGTCCCAGTT...CTGAGTATGTAGGCGTGTTATTAGCAGCTTAATACCCCAGGCTGAGAACCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR CCA 90 bp CTGCTCAACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCTTCAAGGAAGACGAGTTCTGTaGCCAGGCCTGTTTCATCAG +
Preference number: 4 (lower is better)
Translates to: LLNSSEFLPWTTSVYALQGRRVL*PGLFHQ
Trigger: CTGATGAAACAGGCCTGGCCACAGAACTCGTCTTCC...TTGAAGAGCATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGTTGAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR CCA 90 bp TGGGCCTTTCAAGATTATTACAGACAACTCCAAGTAGCTAGAGGCCTGGCCTTAGTTACTCTGGGTCGGTaGGACCTTGTATGGTGTCCC +
Preference number: 4 (lower is better)
Translates to: WAFQDYYRQLQVARGLALVTLGR*DLVWCP
Trigger: GGGACACCATACAAGGTCCCACCGACCCAGAGTAAC...TAAGGCCAGGCCTCTAGCTACTTGGAGTTGTCTGTAATAATCTTGAAAGGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CCATTATGTTTCAGGCTTTCACTATTTGCAGGCAATCCAGCTCCCAGACTCAAACCAATCGCCGTGTGCTaGGGTGTAGTCAGCAGGGTA +
Preference number: 4 (lower is better)
Translates to: PLCFRLSLFAGNPAPRLKPIAVC*GVVSRV
Trigger: TACCCTGCTGACTACACCCCAGCACACGGCGATTGG...TTTGAGTCTGGGAGCTGGATTGCCTGCAAATAGTGAAAGCCTGAAACATAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCTTCAAATGGAATCCAGCCCCCTATATGTTGGCATaGAGACAGGGTGTGCCCCAA +
Preference number: 4 (lower is better)
Translates to: LSSYPGPHLFMLFKWNPAPYMLA*RQGVPQ
Trigger: TTGGGGCACACCCTGTCTCCATGCCAACATATAGGG...GGCTGGATTCCATTTGAAGAGCATAAACAGATGTGGTCCAGGGTAGGAACTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR CCA 90 bp CTTTTCCTTCACTATCCTCACCTTCAGAGCTGCCAGCACCCACCTGGAATGTGGTCTGAGTTCCTACCCTaGACCACATCTGTTTATGCT +
Preference number: 4 (lower is better)
Translates to: LFLHYPHLQSCQHPPGMWSEFLP*TTSVYA
Trigger: AGCATAAACAGATGTGGTCCAGGGTAGGAACTCAGA...CCACATTCCAGGTGGGTGCTGGCAGCTCTGAAGGTGAGGATAGTGAAGGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp TTAGGGAAGAGCAGAGAGGACATGGCCTGGTCAGGTAGGAGGAAGGGGATAGAGCTTGGTCTGTTGCAATaGTTCTCAGGAGACATTTCA +
Preference number: 4 (lower is better)
Translates to: LGKSREDMAWSGRRKGIELGLLQ*FSGDIS
Trigger: TGAAATGTCTCCTGAGAACCATTGCAACAGACCAAG...CTCTATCCCCTTCCTCCTACCTGACCAGGCCATGTCCTCTCTGCTCTTCCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR CCA 90 bp ACCAGCATGCTGCTCACTGTGGGCCTGTTCCCTTCCATAACCTGTTTCCTCATTCCCAGGTTCTCAGCCTaGGGTATTAAGCTGCTAATA +
Preference number: 4 (lower is better)
Translates to: TSMLLTVGLFPSITCFLIPRFSA*GIKLLI
Trigger: TATTAGCAGCTTAATACCCCAGGCTGAGAACCTGGG...AATGAGGAAACAGGTTATGGAAGGGAACAGGCCCACAGTGAGCAGCATGCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp AAAGTGACCCTTGCACTTCCGTTGTCTCTTCTTGCAAATAGAGGTGGTGCTGCTCTGCCAGCACCCACCTaGAATGTGGTTCCTTCACTT +
Preference number: 4 (lower is better)
Translates to: KVTLALPLSLLANRGGAALPAPT*NVVPSL
Trigger: AAGTGAAGGAACCACATTCCAGGTGGGTGCTGGCAG...AGCAGCACCACCTCTATTTGCAAGAAGAGACAACGGAAGTGCAAGGGTCACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CCCAGGTTCTCAGCCTGGGGTATTAAGCTGCTAATAACACGCCTACATACTCAGCGCCTTTGGAGTCCGTaGAGGAAAAGAGCAGAAACA +
Preference number: 4 (lower is better)
Translates to: PRFSAWGIKLLITRLHTQRLWSP*RKRAET
Trigger: TGTTTCTGCTCTTTTCCTCCACGGACTCCAAAGGCG...CTGAGTATGTAGGCGTGTTATTAGCAGCTTAATACCCCAGGCTGAGAACCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp AAAGTGACCCTTGCACTTCCGTTGTCTCTTCTTGCAAATAGAGGTGGTGCTGCTTGGGCTTTACCCTCCTaGGAATGGCTAGACAGCTTC +
Preference number: 4 (lower is better)
Translates to: KVTLALPLSLLANRGGAAWALPS*EWLDSF
Trigger: GAAGCTGTCTAGCCATTCCCAGGAGGGTAAAGCCCA...AGCAGCACCACCTCTATTTGCAAGAAGAGACAACGGAAGTGCAAGGGTCACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp GATGTAGCCTGCTCAACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGGCTTGGCTAGGCTTGTaGATCTCCATCACAGCAAGA +
Preference number: 4 (lower is better)
Translates to: DVACSTALSSYPGPHLFMAWLGL*ISITAR
Trigger: TCTTGCTGTGATGGAGATCCACAAGCCTAGCCAAGC...CATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGTTGAGCAGGCTACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp ACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCTTCAAATGGAATCTGTCCCCGCTCTCCTaGGCTCAGTCCTTTTGCAGT +
Preference number: 4 (lower is better)
Translates to: TALSSYPGPHLFMLFKWNLSPLS*AQSFCS
Trigger: ACTGCAAAAGGACTGAGCCCAGGAGAGCGGGGACAG...ATTCCATTTGAAGAGCATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp ACAGCAAGGATATCCAGGGACTATCCATGTGGCCATAGGGAAGCAAGTGCTGTTGCTCAGCTCAGAGACTaGGCTTCCCAGCTCTATAAA +
Preference number: 4 (lower is better)
Translates to: TARISRDYPCGHREASAVAQLRD*ASQLYK
Trigger: TTTATAGAGCTGGGAAGCCCAGTCTCTGAGCTGAGC...AACAGCACTTGCTTCCCTATGGCCACATGGATAGTCCCTGGATATCCTTGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp TGTAGCCTGCTCAACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGCTTTTGTACCAACTCACTaGATCTGGACAGTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: CSLLNSSEFLPWTTSVYAFVPTH*IWTVGR
Trigger: CCTGCCCACTGTCCAGATCCAGTGAGTTGGTACAAA...AGCATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGTTGAGCAGGCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp TGGGCCTTTCAAGATTATTACAGACAACTCCAAGTAGCTAGAGGCCTGGCCTTATCTGGTCCTCACCCATaGGAAAAGCAAGCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: WAFQDYYRQLQVARGLALSGPHP*EKQAQG
Trigger: TCCCTGGGCTTGCTTTTCCCATGGGTGAGGACCAGA...TAAGGCCAGGCCTCTAGCTACTTGGAGTTGTCTGTAATAATCTTGAAAGGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CTGCTCAACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCTTCAAGCCTCGCTGGGAACCTaGATGAGTCCTATCTGTATG +
Preference number: 4 (lower is better)
Translates to: LLNSSEFLPWTTSVYALQASLGT*MSPICM
Trigger: CATACAGATAGGACTCATCCAGGTTCCCAGCGAGGC...TTGAAGAGCATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGTTGAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCTTCAAATGGAATCCAGCCGCCTCGCTGGGAACCTaGATGAGTCCTATCTGTATG +
Preference number: 4 (lower is better)
Translates to: LSSYPGPHLFMLFKWNPAASLGT*MSPICM
Trigger: CATACAGATAGGACTCATCCAGGTTCCCAGCGAGGC...GGCTGGATTCCATTTGAAGAGCATAAACAGATGTGGTCCAGGGTAGGAACTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCTTCAAATGGAATCCAGCCTGGCTTAGGCAGGGCTaGCCATGGAATGTTGAAGCT +
Preference number: 4 (lower is better)
Translates to: LSSYPGPHLFMLFKWNPAWLRQG*PWNVEA
Trigger: AGCTTCAACATTCCATGGCCAGCCCTGCCTAAGCCA...GGCTGGATTCCATTTGAAGAGCATAAACAGATGTGGTCCAGGGTAGGAACTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp AAAGTGACCCTTGCACTTCCGTTGTCTCTTCTTGCAAATAGAGGTGGTGCTGCTGGTTGGCCTTTGGGTTaGACTCAACAGCATGCACCA +
Preference number: 4 (lower is better)
Translates to: KVTLALPLSLLANRGGAAGWPLG*TQQHAP
Trigger: TGGTGCATGCTGTTGAGTCCAACCCAAAGGCCAACC...AGCAGCACCACCTCTATTTGCAAGAAGAGACAACGGAAGTGCAAGGGTCACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCTTCAAATGGAATCCAGCCCCCTTTCTAGCTTTGTaGCAGCCAGTCCCAACTCCT +
Preference number: 4 (lower is better)
Translates to: LSSYPGPHLFMLFKWNPAPFLAL*QPVPTP
Trigger: AGGAGTTGGGACTGGCTGCCACAAAGCTAGAAAGGG...GGCTGGATTCCATTTGAAGAGCATAAACAGATGTGGTCCAGGGTAGGAACTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp TGGGCCTTTCAAGATTATTACAGACAACTCCAAGTAGCTAGAGGCCTGGCCTTAAGAAAGGCTGGGGTCTaGAGATGCTGGTCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: WAFQDYYRQLQVARGLALRKAGV*RCWSCW
Trigger: CCAGCAAGACCAGCATCTCCAGACCCCAGCCTTTCT...TAAGGCCAGGCCTCTAGCTACTTGGAGTTGTCTGTAATAATCTTGAAAGGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp TATGCTCTTCAAATGGAATCCAGCCTTCAGATGAACCACTGCAATAAACCCTACGCCCAAGGGACTCACTaGCCCAGGACAGTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: YALQMESSLQMNHCNKPYAQGTH*PRTVLC
Trigger: ACAGAGGACTGTCCTGGGCCAGTGAGTCCCTTGGGC...GTAGGGTTTATTGCAGTGGTTCATCTGAAGGCTGGATTCCATTTGAAGAGCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CGTGCTGTCCTTGAACATGTCTTCGGTCCTGGGCATTGTGACCCCAAAGTGTTTAATTTAGCATCAACTTaGGGAGACGCCCAAGGGACT +
Preference number: 4 (lower is better)
Translates to: RAVLEHVFGPGHCDPKVFNLAST*GDAQGT
Trigger: AGTCCCTTGGGCGTCTCCCCAAGTTGATGCTAAATT...AAACACTTTGGGGTCACAATGCCCAGGACCGAAGACATGTTCAAGGACAGCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp ACCAGCATGCTGCTCACTGTGGGCCTGTTCCCTTCCATAACCTGTTTCCTCATTATCACACACTTAGGGTaGGTGCTGAAGTTGCCACTT +
Preference number: 4 (lower is better)
Translates to: TSMLLTVGLFPSITCFLIITHLG*VLKLPL
Trigger: AAGTGGCAACTTCAGCACCCACCCTAAGTGTGTGAT...AATGAGGAAACAGGTTATGGAAGGGAACAGGCCCACAGTGAGCAGCATGCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CGTGCTGTCCTTGAACATGTCTTCGGTCCTGGGCATTGTGACCCCAAAGTGTTTTTGCTGGAGCATAACTaGGACTATTGGTGGGGTACA +
Preference number: 4 (lower is better)
Translates to: RAVLEHVFGPGHCDPKVFLLEHN*DYWWGT
Trigger: TGTACCCCACCAATAGTCCCAGTTATGCTCCAGCAA...AAACACTTTGGGGTCACAATGCCCAGGACCGAAGACATGTTCAAGGACAGCACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356467.5
CDS-3UTR TCA 90 bp GTGGGAGAATACAGGATGGAAAAGCAGACTTCCACGTATTTTCACTTAACTGCAAGACTGAGGATCCGGTaGGCAGCTGCAGGCGAAAAC +
Preference number: 4 (lower is better)
Translates to: VGEYRMEKQTSTYFHLTARLRIR*AAAGEN
Trigger: GTTTTCGCCTGCAGCTGCTCACCGGATCCTCAGTCT...TGCAGTTAAGTGAAAATACGTGGAAGTCTGCTTTTCCATCCTGTATTCTCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp GTGGGAGAATACAGGATGGAAAAGCAGACTTCCACGTATTTTCACTTAACTGCACCGTGGTATGGTGGATaGCATGAGGCTGGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: VGEYRMEKQTSTYFHLTAPWYGG*HEAGQH
Trigger: ATGCTGCCCAGCCTCATGTCATCCACCATACCACGG...TGCAGTTAAGTGAAAATACGTGGAAGTCTGCTTTTCCATCCTGTATTCTCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp CTTGCACTTCCGTTGTCTCTTCTTGCAAATAGAGGTGGTGCTGCTAGGGAACTGGTTGCATACAATGTGTaGCTCCAGATTTGGATGGGC +
Preference number: 4 (lower is better)
Translates to: LALPLSLLANRGGAARELVAYNV*LQIWMG
Trigger: GCCCATCCAAATCTGGAGTCACACATTGTATGCAAC...CAGTTCCCTAGCAGCACCACCTCTATTTGCAAGAAGAGACAACGGAAGTGCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR TCA 90 bp CCCAGGTTCTCAGCCTGGGGTATTAAGCTGCTAATAACACGCCTACATACTCAGGTTGCATACAATGTGTaGCTCCAGATTTGGATGGGC +
Preference number: 4 (lower is better)
Translates to: PRFSAWGIKLLITRLHTQVAYNV*LQIWMG
Trigger: GCCCATCCAAATCTGGAGTCACACATTGTATGCAAC...CTGAGTATGTAGGCGTGTTATTAGCAGCTTAATACCCCAGGCTGAGAACCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR TCA 90 bp TCAGGAGACATTTCATTTGTGTCTGGGACATGGGAATGTCCTGAACTAATCTTGCCTGCTCAACAGCTCTaGGTTCCTACCCTGGACCAC +
Preference number: 4 (lower is better)
Translates to: SGDISFVSGTWECPELILPAQQL*VPTLDH
Trigger: GTGGTCCAGGGTAGGAACTCAGAGCTGTTGAGCAGG...CAAGATTAGTTCAGGACATTCCCATGTCCCAGACACAAATGAAATGTCTCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR TCA 90 bp TCAGGAGACATTTCATTTGTGTCTGGGACATGGGAATGTCCTGAACTAATCTTGCTATGGTCAGACAGGTaGGTCCTGGCACTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: SGDISFVSGTWECPELILLWSDR*VLALGR
Trigger: CCTTCCCAGTGCCAGGACTCACCTGTCTGACCATAG...CAAGATTAGTTCAGGACATTCCCATGTCCCAGACACAAATGAAATGTCTCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp CTTCAGATGAACCACTGCAATAAACCCTACTCTCTGCTTGCCTCTAGACTGGGAAACCCAAGGGTTTCCTaGTTTTTCCCTCCCTTAGGG +
Preference number: 4 (lower is better)
Translates to: LQMNHCNKPYSLLASRLGNPRVS*FFPPLG
Trigger: CCCTAAGGGAGGGAAAAATCAGGAAACCCTTGGGTT...TCCCAGTCTAGAGGCAAGCAGAGAGTAGGGTTTATTGCAGTGGTTCATCTGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp CCATTATGTTTCAGGCTTTCACTATTTGCAGGCAATCCAGCTCCCAGACTCAAATGGCTAGACAGCTTCTaGGCTCCTTCCAACCCAAGG +
Preference number: 4 (lower is better)
Translates to: PLCFRLSLFAGNPAPRLKWLDSF*APSNPR
Trigger: CCTTGGGTTGGAAGGAGCTCAGAAGCTGTCTAGCCA...TTTGAGTCTGGGAGCTGGATTGCCTGCAAATAGTGAAAGCCTGAAACATAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp GATGTAGCCTGCTCAACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGTGTTCAACTGTTCTGTaGACTGTGAGGTCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: DVACSTALSSYPGPHLFMCSTVL*TVRSSC
Trigger: ACAGCTGGACCTCACAGTTCACAGAACAGTTGAACA...CATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGTTGAGCAGGCTACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp ACCAGCATGCTGCTCACTGTGGGCCTGTTCCCTTCCATAACCTGTTTCCTCATTACTTTTTGTCTAGCTTaGCCACCGTGCCATCTAGAA +
Preference number: 4 (lower is better)
Translates to: TSMLLTVGLFPSITCFLITFCLA*PPCHLE
Trigger: TTCTAGATGGCACGGTGGTCAAGCTAGACAAAAAGT...AATGAGGAAACAGGTTATGGAAGGGAACAGGCCCACAGTGAGCAGCATGCTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp CCATTATGTTTCAGGCTTTCACTATTTGCAGGCAATCCAGCTCCCAGACTCAAACGGTCCTGGGCATTGTaGCCCCAAAGTGTTTTGTCC +
Preference number: 4 (lower is better)
Translates to: PLCFRLSLFAGNPAPRLKRSWAL*PQSVLS
Trigger: GGACAAAACACTTTGGGGTCACAATGCCCAGGACCG...TTTGAGTCTGGGAGCTGGATTGCCTGCAAATAGTGAAAGCCTGAAACATAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp AAAGTGACCCTTGCACTTCCGTTGTCTCTTCTTGCAAATAGAGGTGGTGCTGCTCTGATCTCACCCATTTaGTTCCTATGGGCCGGTACT +
Preference number: 4 (lower is better)
Translates to: KVTLALPLSLLANRGGAALISPI*FLWAGT
Trigger: AGTACCGGCCCATAGGAATCAAATGGGTGAGATCAG...AGCAGCACCACCTCTATTTGCAAGAAGAGACAACGGAAGTGCAAGGGTCACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp TGTAGCCTGCTCAACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCTCTGTCATGTGATATaGAACAGGGAAGCAGATGCC +
Preference number: 4 (lower is better)
Translates to: CSLLNSSEFLPWTTSVYALCHVI*NREADA
Trigger: GGCATCTGCTTCCCTGTTTCATATCACATGACAGAG...AGCATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGTTGAGCAGGCTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp TCAGGAGACATTTCATTTGTGTCTGGGACATGGGAATGTCCTGAACTAATCTTGCTGGGAGGTGGAAGGTaGCTTCAGTGCCACAGGAAG +
Preference number: 4 (lower is better)
Translates to: SGDISFVSGTWECPELILLGGGR*LQCHRK
Trigger: CTTCCTGTGGCACTGAAGGCACCTTCCACCTCCCAG...CAAGATTAGTTCAGGACATTCCCATGTCCCAGACACAAATGAAATGTCTCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR GCA 90 bp CTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCTTCAAATGGAATCCAGCCGAAAGCCGCAGAGGATaGTTGGTAAGTTCGGTTCTC +
Preference number: 4 (lower is better)
Translates to: LSSYPGPHLFMLFKWNPAESRRG*LVSSVL
Trigger: GAGAACCGAACTTACCAAGCATCCTCTGCGGCTTTC...GGCTGGATTCCATTTGAAGAGCATAAACAGATGTGGTCCAGGGTAGGAACTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR GCA 90 bp CTGCTCAACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCTTCAAGAAAGCCGCAGAGGATaGTTGGTAAGTTCGGTTCTC +
Preference number: 4 (lower is better)
Translates to: LLNSSEFLPWTTSVYALQESRRG*LVSSVL
Trigger: GAGAACCGAACTTACCAAGCATCCTCTGCGGCTTTC...TTGAAGAGCATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGTTGAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR GCA 90 bp TCTGTTTATGCTCTTCAAATGGAATCCAGCCTTCAGATGAACCACTGCAATAAAGCCCCAATCGCCGTGTaGTGGGGTGTAGTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: SVYALQMESSLQMNHCNKAPIAV*WGVVSR
Trigger: CCTGCTGACTACACCCCAGCACACGGCGATTGGGGC...TTTATTGCAGTGGTTCATCTGAAGGCTGGATTCCATTTGAAGAGCATAAACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR GCA 90 bp ACTTGGGCCATGAATGGCACAGGTAACCAAGAGCTTGGCCTGCCTGCAAGCTCTGACCACATCTGTTTATaGTCTTCAAATGGAATCCAG +
Preference number: 4 (lower is better)
Translates to: TWAMNGTGNQELGLPASSDHICL*SSNGIQ
Trigger: CTGGATTCCATTTGAAGAGCATAAACAGATGTGGTC...AGAGCTTGCAGGCAGGCCAAGCTCTTGGTTACCTGTGCCATTCATGGCCCAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp TGGGCCTTTCAAGATTATTACAGACAACTCCAAGTAGCTAGAGGCCTGGCCTTATGGGCTCAGTCCTTTTaGAGTGACTCCCCAAGCTTG +
Preference number: 4 (lower is better)
Translates to: WAFQDYYRQLQVARGLALWAQSF*SDSPSL
Trigger: CAAGCTTGGGGAGTCACTGCAAAAGGACTGAGCCCA...TAAGGCCAGGCCTCTAGCTACTTGGAGTTGTCTGTAATAATCTTGAAAGGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp GTGGGAGAATACAGGATGGAAAAGCAGACTTCCACGTATTTTCACTTAACTGCACCTGGCCATAGGTGTTaGACTTGGGGAGAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: VGEYRMEKQTSTYFHLTAPGHRC*TWGEAV
Trigger: CACTGCCTCTCCCCAAGTGCAACACCTATGGCCAGG...TGCAGTTAAGTGAAAATACGTGGAAGTCTGCTTTTCCATCCTGTATTCTCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp CCTTGGGCCTTTCAAGATTATTACAGACAACTCCAAGTAGCTAGAGGCCTGGCCTTCTCATCCTCCTTGTaGTGCCAGTTAGATGTGCCT +
Preference number: 4 (lower is better)
Translates to: PWAFQDYYRQLQVARGLAFSSSL*CQLDVP
Trigger: AGGCACATCTAACTGGCAGCACAAGGAGGATGAGAA...GGCCAGGCCTCTAGCTACTTGGAGTTGTCTGTAATAATCTTGAAAGGCCCAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp CTTGCACTTCCGTTGTCTCTTCTTGCAAATAGAGGTGGTGCTGCTAGGGAACTGTTCTCATCCTCCTTGTaGTGCCAGTTAGATGTGCCT +
Preference number: 4 (lower is better)
Translates to: LALPLSLLANRGGAARELFSSSL*CQLDVP
Trigger: AGGCACATCTAACTGGCAGCACAAGGAGGATGAGAA...CAGTTCCCTAGCAGCACCACCTCTATTTGCAAGAAGAGACAACGGAAGTGCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp TCAGGAGACATTTCATTTGTGTCTGGGACATGGGAATGTCCTGAACTAATCTTGGCCTCGCTTAGTCAGTaGCTCGCTGGGAACCTGGAT +
Preference number: 4 (lower is better)
Translates to: SGDISFVSGTWECPELILASLSQ*LAGNLD
Trigger: ATCCAGGTTCCCAGCGAGGCACTGACTAAGCGAGGC...CAAGATTAGTTCAGGACATTCCCATGTCCCAGACACAAATGAAATGTCTCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCTTCAAATGGAATCCAGCCAACTGGGACTATTGGTaGGGTACAGGCTGGGATTGT +
Preference number: 4 (lower is better)
Translates to: LSSYPGPHLFMLFKWNPANWDYW*GTGWDC
Trigger: ACAATCCCAGCCTGTACCCCACCAATAGTCCCAGTT...GGCTGGATTCCATTTGAAGAGCATAAACAGATGTGGTCCAGGGTAGGAACTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR CCA 90 bp CTGCTCAACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCTTCAACATAACTGGGACTATTaGTGGGGTACAGGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: LLNSSEFLPWTTSVYALQHNWDY*WGTGWD
Trigger: ATCCCAGCCTGTACCCCACCAATAGTCCCAGTTATG...TTGAAGAGCATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGTTGAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR CCA 90 bp CTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCTTCAAATGGAATCCAGCCCATAACTGGGACTATTaGTGGGGTACAGGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: LSSYPGPHLFMLFKWNPAHNWDY*WGTGWD
Trigger: ATCCCAGCCTGTACCCCACCAATAGTCCCAGTTATG...GGCTGGATTCCATTTGAAGAGCATAAACAGATGTGGTCCAGGGTAGGAACTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR CCA 90 bp CCTTGGGCCTTTCAAGATTATTACAGACAACTCCAAGTAGCTAGAGGCCTGGCCACTCTGGAGCATAACTaGGACTATTGGTGGGGTACA +
Preference number: 4 (lower is better)
Translates to: PWAFQDYYRQLQVARGLATLEHN*DYWWGT
Trigger: TGTACCCCACCAATAGTCCCAGTTATGCTCCAGAGT...GGCCAGGCCTCTAGCTACTTGGAGTTGTCTGTAATAATCTTGAAAGGCCCAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000064778.8
CDS-3UTR CCA 90 bp CTTTTCCTTCACTATCCTCACCTTCAGAGCTGCCAGCACCCACCTGGAATGTGGCAGGAACTGAAACTCTaGAGCATAACTGGGACTATT +
Preference number: 4 (lower is better)
Translates to: LFLHYPHLQSCQHPPGMWQELKL*SITGTI
Trigger: AATAGTCCCAGTTATGCTCCAGAGTTTCAGTTCCTG...CCACATTCCAGGTGGGTGCTGGCAGCTCTGAAGGTGAGGATAGTGAAGGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000064778.8
CDS-3UTR CCA 90 bp TATGCTCTTCAAATGGAATCCAGCCTTCAGATGAACCACTGCAATAAACCCTACGTGTCCACTGGGAGGTaGAAGGTGCCTTCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: YALQMESSLQMNHCNKPYVSTGR*KVPSVP
Trigger: TGGCACTGAAGGCACCTTCCACCTCCCAGTGGACAC...GTAGGGTTTATTGCAGTGGTTCATCTGAAGGCTGGATTCCATTTGAAGAGCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR CCA 90 bp TCAGGAGACATTTCATTTGTGTCTGGGACATGGGAATGTCCTGAACTAATCTTGCCAATCGCCGTGTGCTaGGGTGTAGTCAGCAGGGTA +
Preference number: 4 (lower is better)
Translates to: SGDISFVSGTWECPELILPIAVC*GVVSRV
Trigger: TACCCTGCTGACTACACCCCAGCACACGGCGATTGG...CAAGATTAGTTCAGGACATTCCCATGTCCCAGACACAAATGAAATGTCTCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR CCA 90 bp TGTTTCCTCATTTGTCAATTGACTGTAATAACTCTAACCCTGTCCCTCTCAGGGTGCTTGCCTCTAGACTaGGATCCCCAGGGACAGGAC +
Preference number: 4 (lower is better)
Translates to: CFLICQLTVITLTLSLSGCLPLD*DPQGQD
Trigger: GTCCTGTCCCTGGGGATCCCAGTCTAGAGGCAAGCA...CCCTGAGAGGGACAGGGTTAGAGTTATTACAGTCAATTGACAAATGAGGAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp ACCAGCATGCTGCTCACTGTGGGCCTGTTCCCTTCCATAACCTGTTTCCTCATTTCTGAGTTCCTACCCTaGACCACATCTGTTTATGCT +
Preference number: 4 (lower is better)
Translates to: TSMLLTVGLFPSITCFLISEFLP*TTSVYA
Trigger: AGCATAAACAGATGTGGTCCAGGGTAGGAACTCAGA...AATGAGGAAACAGGTTATGGAAGGGAACAGGCCCACAGTGAGCAGCATGCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp AATAAACCCTACTCTCTGCTTGCCTCTAGACTGGGATCCCCAGGGACAGGACACAGGTGGTTTTGTTCTTaGTCTGTTGCAATGGTTCTC +
Preference number: 4 (lower is better)
Translates to: NKPYSLLASRLGSPGTGHRWFCS*SVAMVL
Trigger: GAGAACCATTGCAACAGACCAAGAACAAAACCACCT...GTGTCCTGTCCCTGGGGATCCCAGTCTAGAGGCAAGCAGAGAGTAGGGTTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR CCA 90 bp CTTGCACTTCCGTTGTCTCTTCTTGCAAATAGAGGTGGTGCTGCTAGGGAACTGCCCAGGTTCTCAGCCTaGGGTATTAAGCTGCTAATA +
Preference number: 4 (lower is better)
Translates to: LALPLSLLANRGGAARELPRFSA*GIKLLI
Trigger: TATTAGCAGCTTAATACCCCAGGCTGAGAACCTGGG...CAGTTCCCTAGCAGCACCACCTCTATTTGCAAGAAGAGACAACGGAAGTGCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR CCA 90 bp TGGGCCTTTCAAGATTATTACAGACAACTCCAAGTAGCTAGAGGCCTGGCCTTAAGCTCCTCATCAGAGTaGGTCCATGACAGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: WAFQDYYRQLQVARGLALSSSSE*VHDSSE
Trigger: CTCTGAGCTGTCATGGACCCACTCTGATGAGGAGCT...TAAGGCCAGGCCTCTAGCTACTTGGAGTTGTCTGTAATAATCTTGAAAGGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp ACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCTTCAAATGGAATACCTGCTCCTTCTCCTaGAGGTGGAGTCAGGTACAG +
Preference number: 4 (lower is better)
Translates to: TALSSYPGPHLFMLFKWNTCSFS*RWSQVQ
Trigger: CTGTACCTGACTCCACCTCCAGGAGAAGGAGCAGGT...ATTCCATTTGAAGAGCATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp TGTAGCCTGCTCAACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGCTAGCCTGGGATTCGAGTaGCTCTGTCACTTATTAGCA +
Preference number: 4 (lower is better)
Translates to: CSLLNSSEFLPWTTSVYASLGFE*LCHLLA
Trigger: TGCTAATAAGTGACAGAGCCACTCGAATCCCAGGCT...AGCATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGTTGAGCAGGCTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CCCAGGTTCTCAGCCTGGGGTATTAAGCTGCTAATAACACGCCTACATACTCAGAGCCTGGGATTCGAGTaGCTCTGTCACTTATTAGCA +
Preference number: 4 (lower is better)
Translates to: PRFSAWGIKLLITRLHTQSLGFE*LCHLLA
Trigger: TGCTAATAAGTGACAGAGCCACTCGAATCCCAGGCT...CTGAGTATGTAGGCGTGTTATTAGCAGCTTAATACCCCAGGCTGAGAACCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp ACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCTTCAAATGGAATCTGAAAAAGGGGTGCTaGACCTGGGCTCTTCCAGAC +
Preference number: 4 (lower is better)
Translates to: TALSSYPGPHLFMLFKWNLKKGC*TWALPD
Trigger: GTCTGGAAGAGCCCAGGTCCAGCACCCCTTTTTCAG...ATTCCATTTGAAGAGCATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp TGGGCCTTTCAAGATTATTACAGACAACTCCAAGTAGCTAGAGGCCTGGCCTTAACTGGATCTGGACAGTaGGCAGGCTCTCAGGGATTA +
Preference number: 4 (lower is better)
Translates to: WAFQDYYRQLQVARGLALTGSGQ*AGSQGL
Trigger: TAATCCCTGAGAGCCTGCCCACTGTCCAGATCCAGT...TAAGGCCAGGCCTCTAGCTACTTGGAGTTGTCTGTAATAATCTTGAAAGGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp TGTAGCCTGCTCAACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGCTTCCCATCAGTTAGTCTaGCGTGTTTCTTCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: CSLLNSSEFLPWTTSVYASHQLV*RVSSAL
Trigger: CAGAGCTGAAGAAACACGCCAGACTAACTGATGGGA...AGCATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGTTGAGCAGGCTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp TGTAGCCTGCTCAACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGCTTTGCTGGAGCATAACTaGGACTATTGGTGGGGTACA +
Preference number: 4 (lower is better)
Translates to: CSLLNSSEFLPWTTSVYALLEHN*DYWWGT
Trigger: TGTACCCCACCAATAGTCCCAGTTATGCTCCAGCAA...AGCATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGTTGAGCAGGCTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356467.5
ENST00000450446.6
CDS-3UTR TCA 90 bp TCAGGAGACATTTCATTTGTGTCTGGGACATGGGAATGTCCTGAACTAATCTTGGTATGGTGGATGACATaGGGCTGGGCAGCATACACC +
Preference number: 4 (lower is better)
Translates to: SGDISFVSGTWECPELILVWWMT*GWAAYT
Trigger: GGTGTATGCTGCCCAGCCTCATGTCATCCACCATAC...CAAGATTAGTTCAGGACATTCCCATGTCCCAGACACAAATGAAATGTCTCCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp TCTGTTTATGCTCTTCAAATGGAATCCAGCCTTCAGATGAACCACTGCAATAAACAGCAGGGTACCTGCTaGCATTGCCATGGTGGTGCC +
Preference number: 4 (lower is better)
Translates to: SVYALQMESSLQMNHCNKQQGTC*HCHGGA
Trigger: GGCACCACCATGGCAATGTCAGCAGGTACCCTGCTG...TTTATTGCAGTGGTTCATCTGAAGGCTGGATTCCATTTGAAGAGCATAAACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp TATGCTCTTCAAATGGAATCCAGCCTTCAGATGAACCACTGCAATAAACCCTACTTCAAACCAAAGCCATaGGGCAAGCACCGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: YALQMESSLQMNHCNKPYFKPKP*GKHRSS
Trigger: GGAGGAGCGGTGCTTGCCTCATGGCTTTGGTTTGAA...GTAGGGTTTATTGCAGTGGTTCATCTGAAGGCTGGATTCCATTTGAAGAGCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR TCA 90 bp TTAGGGAAGAGCAGAGAGGACATGGCCTGGTCAGGTAGGAGGAAGGGGATAGAGGTCCCTTCAGTTCCATaGGTCTATGAAATGTTTATT +
Preference number: 4 (lower is better)
Translates to: LGKSREDMAWSGRRKGIEVPSVP*VYEMFI
Trigger: AATAAACATTTCATAGACTCATGGAACTGAAGGGAC...CTCTATCCCCTTCCTCCTACCTGACCAGGCCATGTCCTCTCTGCTCTTCCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp TCAGGAGACATTTCATTTGTGTCTGGGACATGGGAATGTCCTGAACTAATCTTGCCTCTCCTCTCGGGATaGGGGGCTACTGTCCTAAAA +
Preference number: 4 (lower is better)
Translates to: SGDISFVSGTWECPELILPLLSG*GATVLK
Trigger: TTTTAGGACAGTAGCCCCTCATCCCGAGAGGAGAGG...CAAGATTAGTTCAGGACATTCCCATGTCCCAGACACAAATGAAATGTCTCCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp TGGGCCTTTCAAGATTATTACAGACAACTCCAAGTAGCTAGAGGCCTGGCCTTAAACCCAAGGGTTTCCTaGTTTTTCCCTCCCTTAGGG +
Preference number: 4 (lower is better)
Translates to: WAFQDYYRQLQVARGLALNPRVS*FFPPLG
Trigger: CCCTAAGGGAGGGAAAAATCAGGAAACCCTTGGGTT...TAAGGCCAGGCCTCTAGCTACTTGGAGTTGTCTGTAATAATCTTGAAAGGCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp ACAGCAAGGATATCCAGGGACTATCCATGTGGCCATAGGGAAGCAAGTGCTGTTCACTTCCAAGCTGTGTaGCCTTTTAGCAAGTCTCAA +
Preference number: 4 (lower is better)
Translates to: TARISRDYPCGHREASAVHFQAV*PFSKSQ
Trigger: TTGAGACTTGCTAAAAGGTCACACAGCTTGGAAGTG...AACAGCACTTGCTTCCCTATGGCCACATGGATAGTCCCTGGATATCCTTGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp CTTGCACTTCCGTTGTCTCTTCTTGCAAATAGAGGTGGTGCTGCTAGGGAACTGCACTTCCAAGCTGTGTaGCCTTTTAGCAAGTCTCAA +
Preference number: 4 (lower is better)
Translates to: LALPLSLLANRGGAARELHFQAV*PFSKSQ
Trigger: TTGAGACTTGCTAAAAGGTCACACAGCTTGGAAGTG...CAGTTCCCTAGCAGCACCACCTCTATTTGCAAGAAGAGACAACGGAAGTGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp ACCAGCATGCTGCTCACTGTGGGCCTGTTCCCTTCCATAACCTGTTTCCTCATTAAAGAGCAGAGGATTTaGAGAATCACTTCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: TSMLLTVGLFPSITCFLIKEQRI*RITSKL
Trigger: CAGCTTGGAAGTGATTCTTCAAATCCTCTGCTCTTT...AATGAGGAAACAGGTTATGGAAGGGAACAGGCCCACAGTGAGCAGCATGCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp ACAGCAAGGATATCCAGGGACTATCCATGTGGCCATAGGGAAGCAAGTGCTGTTCATGTGATTCCTTTCTaGAGGCCATCAGAACAAAGC +
Preference number: 4 (lower is better)
Translates to: TARISRDYPCGHREASAVHVIPF*RPSEQS
Trigger: GCTTTGTTCTGATGGCCTTCAGAAAGGAATCACATG...AACAGCACTTGCTTCCCTATGGCCACATGGATAGTCCCTGGATATCCTTGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp CTTGCACTTCCGTTGTCTCTTCTTGCAAATAGAGGTGGTGCTGCTAGGGAACTGGGATGTTACATGCCATaGGAACAGGTTTCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: LALPLSLLANRGGAARELGCYMP*EQVSLS
Trigger: TGACAGAGAAACCTGTTCTCATGGCATGTAACATCC...CAGTTCCCTAGCAGCACCACCTCTATTTGCAAGAAGAGACAACGGAAGTGCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp TCTGTTTATGCTCTTCAAATGGAATCCAGCCTTCAGATGAACCACTGCAATAAAGTAGGCAGGGGCAGCTaGTGGATAGGCTGTGGGGTA +
Preference number: 4 (lower is better)
Translates to: SVYALQMESSLQMNHCNKVGRGS*WIGCGV
Trigger: TACCCCACAGCCTATCCAGCAGCTGCCCCTGCCTAC...TTTATTGCAGTGGTTCATCTGAAGGCTGGATTCCATTTGAAGAGCATAAACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR GCA 90 bp CTTGCACTTCCGTTGTCTCTTCTTGCAAATAGAGGTGGTGCTGCTAGGGAACTGATAAACCCTACTCTCTaGTTGCCTCTAGACTGGGAT +
Preference number: 4 (lower is better)
Translates to: LALPLSLLANRGGAARELINPTL*LPLDWD
Trigger: ATCCCAGTCTAGAGGCAAGCAGAGAGTAGGGTTTAT...CAGTTCCCTAGCAGCACCACCTCTATTTGCAAGAAGAGACAACGGAAGTGCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR GCA 90 bp CCCAGGTTCTCAGCCTGGGGTATTAAGCTGCTAATAACACGCCTACATACTCAGATAAACCCTACTCTCTaGTTGCCTCTAGACTGGGAT +
Preference number: 4 (lower is better)
Translates to: PRFSAWGIKLLITRLHTQINPTL*LPLDWD
Trigger: ATCCCAGTCTAGAGGCAAGCAGAGAGTAGGGTTTAT...CTGAGTATGTAGGCGTGTTATTAGCAGCTTAATACCCCAGGCTGAGAACCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR GCA 90 bp ACTTGGGCCATGAATGGCACAGGTAACCAAGAGCTTGGCCTGCCTGCAAGCTCTAATGTCAAAGTACTTTaGATACCAAAAACGCTCTGG +
Preference number: 4 (lower is better)
Translates to: TWAMNGTGNQELGLPASSNVKVL*IPKTLW
Trigger: CCAGAGCGTTTTTGGTATGCAAAGTACTTTGACATT...AGAGCTTGCAGGCAGGCCAAGCTCTTGGTTACCTGTGCCATTCATGGCCCAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp TCAGGAGACATTTCATTTGTGTCTGGGACATGGGAATGTCCTGAACTAATCTTGGGCCCACTCTACTACTaGCCCTCTCTGGATTCCCAA +
Preference number: 4 (lower is better)
Translates to: SGDISFVSGTWECPELILGPLYY*PSLDSQ
Trigger: TTGGGAATCCAGAGAGGGGCAGTAGTAGAGTGGGCC...CAAGATTAGTTCAGGACATTCCCATGTCCCAGACACAAATGAAATGTCTCCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp CCCAGGTTCTCAGCCTGGGGTATTAAGCTGCTAATAACACGCCTACATACTCAGTTGGACTCAACAGCATaGACCACAGAAGATATCCAC +
Preference number: 4 (lower is better)
Translates to: PRFSAWGIKLLITRLHTQLDSTA*TTEDIH
Trigger: GTGGATATCTTCTGTGGTGCATGCTGTTGAGTCCAA...CTGAGTATGTAGGCGTGTTATTAGCAGCTTAATACCCCAGGCTGAGAACCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp ACCAGCATGCTGCTCACTGTGGGCCTGTTCCCTTCCATAACCTGTTTCCTCATTTATGGGCCGGTACTTTaGAAAGCTGTTACATCTGTT +
Preference number: 4 (lower is better)
Translates to: TSMLLTVGLFPSITCFLIYGPVL*KAVTSV
Trigger: AACAGATGTAACAGCTTTGCAAAGTACCGGCCCATA...AATGAGGAAACAGGTTATGGAAGGGAACAGGCCCACAGTGAGCAGCATGCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp TGGGCCTTTCAAGATTATTACAGACAACTCCAAGTAGCTAGAGGCCTGGCCTTAAACTGGGACTATTGGTaGGGTACAGGCTGGGATTGT +
Preference number: 4 (lower is better)
Translates to: WAFQDYYRQLQVARGLALNWDYW*GTGWDC
Trigger: ACAATCCCAGCCTGTACCCCACCAATAGTCCCAGTT...TAAGGCCAGGCCTCTAGCTACTTGGAGTTGTCTGTAATAATCTTGAAAGGCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp ACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCTTCAAATGGAATCCCTATATGTTGGCATaGAGACAGGGTGTGCCCCAA +
Preference number: 4 (lower is better)
Translates to: TALSSYPGPHLFMLFKWNPYMLA*RQGVPQ
Trigger: TTGGGGCACACCCTGTCTCCATGCCAACATATAGGG...ATTCCATTTGAAGAGCATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR CCA 90 bp GATGTAGCCTGCTCAACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGTCTGAGTTCCTACCCTaGACCACATCTGTTTATGCT +
Preference number: 4 (lower is better)
Translates to: DVACSTALSSYPGPHLFMSEFLP*TTSVYA
Trigger: AGCATAAACAGATGTGGTCCAGGGTAGGAACTCAGA...CATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGTTGAGCAGGCTACATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR CCA 90 bp TGTTTCCTCATTTGTCAATTGACTGTAATAACTCTAACCCTGTCCCTCTCAGGGCAGACAGGTGAGTCCTaGCACTGGGAAGGGCAAAAG +
Preference number: 4 (lower is better)
Translates to: CFLICQLTVITLTLSLSGQTGES*HWEGQK
Trigger: CTTTTGCCCTTCCCAGTGCCAGGACTCACCTGTCTG...CCCTGAGAGGGACAGGGTTAGAGTTATTACAGTCAATTGACAAATGAGGAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp TCAGGAGACATTTCATTTGTGTCTGGGACATGGGAATGTCCTGAACTAATCTTGCAGACAGGTGAGTCCTaGCACTGGGAAGGGCAAAAG +
Preference number: 4 (lower is better)
Translates to: SGDISFVSGTWECPELILQTGES*HWEGQK
Trigger: CTTTTGCCCTTCCCAGTGCCAGGACTCACCTGTCTG...CAAGATTAGTTCAGGACATTCCCATGTCCCAGACACAAATGAAATGTCTCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp TATGCTCTTCAAATGGAATCCAGCCTTCAGATGAACCACTGCAATAAACCCTACGTGACTCCCCAAGCTTaGCTAGGCTTGTGGATCTCC +
Preference number: 4 (lower is better)
Translates to: YALQMESSLQMNHCNKPYVTPQA*LGLWIS
Trigger: GGAGATCCACAAGCCTAGCCAAGCTTGGGGAGTCAC...GTAGGGTTTATTGCAGTGGTTCATCTGAAGGCTGGATTCCATTTGAAGAGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CTTCAGATGAACCACTGCAATAAACCCTACTCTCTGCTTGCCTCTAGACTGGGAGCTCATTACAGGTCCTaGCCCAAAGCAGTTCATACA +
Preference number: 4 (lower is better)
Translates to: LQMNHCNKPYSLLASRLGAHYRS*PKAVHT
Trigger: TGTATGAACTGCTTTGGGCCAGGACCTGTAATGAGC...TCCCAGTCTAGAGGCAAGCAGAGAGTAGGGTTTATTGCAGTGGTTCATCTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp GATGTAGCCTGCTCAACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGTGGGAGAATACAGGATaGAAAAGCAGACTTCCACGT +
Preference number: 4 (lower is better)
Translates to: DVACSTALSSYPGPHLFMWENTG*KSRLPR
Trigger: ACGTGGAAGTCTGCTTTTCCATCCTGTATTCTCCCA...CATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGTTGAGCAGGCTACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp AAAGTGACCCTTGCACTTCCGTTGTCTCTTCTTGCAAATAGAGGTGGTGCTGCTTCCCATCAGTTAGTCTaGCGTGTTTCTTCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: KVTLALPLSLLANRGGAASHQLV*RVSSAL
Trigger: CAGAGCTGAAGAAACACGCCAGACTAACTGATGGGA...AGCAGCACCACCTCTATTTGCAAGAAGAGACAACGGAAGTGCAAGGGTCACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp ACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCTTCAAATGGAATTGGCTTAGGCAGGGCTaGCCATGGAATGTTGAAGCT +
Preference number: 4 (lower is better)
Translates to: TALSSYPGPHLFMLFKWNWLRQG*PWNVEA
Trigger: AGCTTCAACATTCCATGGCCAGCCCTGCCTAAGCCA...ATTCCATTTGAAGAGCATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp ACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCTTCAAATGGAATGGTTGGCCTTTGGGTTaGACTCAACAGCATGCACCA +
Preference number: 4 (lower is better)
Translates to: TALSSYPGPHLFMLFKWNGWPLG*TQQHAP
Trigger: TGGTGCATGCTGTTGAGTCCAACCCAAAGGCCAACC...ATTCCATTTGAAGAGCATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp TGTTTCCTCATTTGTCAATTGACTGTAATAACTCTAACCCTGTCCCTCTCAGGGGCCTCGGTTGGCCTTTaGGTTGGACTCAACAGCATG +
Preference number: 4 (lower is better)
Translates to: CFLICQLTVITLTLSLSGASVGL*VGLNSM
Trigger: CATGCTGTTGAGTCCAACCCAAAGGCCAACCGAGGC...CCCTGAGAGGGACAGGGTTAGAGTTATTACAGTCAATTGACAAATGAGGAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp TCAGGAGACATTTCATTTGTGTCTGGGACATGGGAATGTCCTGAACTAATCTTGAGAAAGGCTGGGGTCTaGAGATGCTGGTCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: SGDISFVSGTWECPELILRKAGV*RCWSCW
Trigger: CCAGCAAGACCAGCATCTCCAGACCCCAGCCTTTCT...CAAGATTAGTTCAGGACATTCCCATGTCCCAGACACAAATGAAATGTCTCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CTTCAGATGAACCACTGCAATAAACCCTACTCTCTGCTTGCCTCTAGACTGGGAACACAGGCAAGGCCATaGGGCTTTCCAATCTTTACA +
Preference number: 4 (lower is better)
Translates to: LQMNHCNKPYSLLASRLGTQARP*GFPIFT
Trigger: TGTAAAGATTGGAAAGCCCCATGGCCTTGCCTGTGT...TCCCAGTCTAGAGGCAAGCAGAGAGTAGGGTTTATTGCAGTGGTTCATCTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp TCTGTTTATGCTCTTCAAATGGAATCCAGCCTTCAGATGAACCACTGCAATAAAGCCCAAGGGACTCACTaGCCCAGGACAGTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: SVYALQMESSLQMNHCNKAQGTH*PRTVLC
Trigger: ACAGAGGACTGTCCTGGGCCAGTGAGTCCCTTGGGC...TTTATTGCAGTGGTTCATCTGAAGGCTGGATTCCATTTGAAGAGCATAAACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCTTCAAATGGAATCCAGCCAATTTAGCATCAACTTaGGGAGACGCCCAAGGGACT +
Preference number: 4 (lower is better)
Translates to: LSSYPGPHLFMLFKWNPANLAST*GDAQGT
Trigger: AGTCCCTTGGGCGTCTCCCCAAGTTGATGCTAAATT...GGCTGGATTCCATTTGAAGAGCATAAACAGATGTGGTCCAGGGTAGGAACTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CTGCTCAACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCTTCAAGATTTCAACTCTGAATaGCCTCACTGTGCTCCCACA +
Preference number: 4 (lower is better)
Translates to: LLNSSEFLPWTTSVYALQDFNSE*PHCAPT
Trigger: TGTGGGAGCACAGTGAGGCCATTCAGAGTTGAAATC...TTGAAGAGCATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGTTGAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CTTGCACTTCCGTTGTCTCTTCTTGCAAATAGAGGTGGTGCTGCTAGGGAACTGCATCAGCAGAGTTGCTaGAGCATAACTGGGACTATT +
Preference number: 4 (lower is better)
Translates to: LALPLSLLANRGGAARELHQQSC*SITGTI
Trigger: AATAGTCCCAGTTATGCTCCAGCAACTCTGCTGATG...CAGTTCCCTAGCAGCACCACCTCTATTTGCAAGAAGAGACAACGGAAGTGCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356467.5
ENST00000450446.6
CDS-3UTR TCA 90 bp TCTGTTTATGCTCTTCAAATGGAATCCAGCCTTCAGATGAACCACTGCAATAAAAGACTGAGGATCCGGTaGGCAGCTGCAGGCGAAAAC +
Preference number: 4 (lower is better)
Translates to: SVYALQMESSLQMNHCNKRLRIR*AAAGEN
Trigger: GTTTTCGCCTGCAGCTGCTCACCGGATCCTCAGTCT...TTTATTGCAGTGGTTCATCTGAAGGCTGGATTCCATTTGAAGAGCATAAACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR TCA 90 bp CTGCTCAACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCTTCAACAGAGTTGCATAAGCTaGATGCAGGAACTGAAACTC +
Preference number: 4 (lower is better)
Translates to: LLNSSEFLPWTTSVYALQQSCIS*MQELKL
Trigger: GAGTTTCAGTTCCTGCATTCAGCTTATGCAACTCTG...TTGAAGAGCATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGTTGAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000064778.8
CDS-3UTR TCA 90 bp AAAGTGACCCTTGCACTTCCGTTGTCTCTTCTTGCAAATAGAGGTGGTGCTGCTGACAAAATCACCTTTTaGGGAAGTGCCAGGTCAGTT +
Preference number: 4 (lower is better)
Translates to: KVTLALPLSLLANRGGAADKITF*GSARSV
Trigger: AACTGACCTGGCACTTCCTCAAAAGGTGATTTTGTC...AGCAGCACCACCTCTATTTGCAAGAAGAGACAACGGAAGTGCAAGGGTCACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp TATGCTCTTCAAATGGAATCCAGCCTTCAGATGAACCACTGCAATAAACCCTACCCTTCACTTGGGCCATaGATGGCACAGGTAACCAAG +
Preference number: 4 (lower is better)
Translates to: YALQMESSLQMNHCNKPYPSLGP*MAQVTK
Trigger: CTTGGTTACCTGTGCCATTCATGGCCCAAGTGAAGG...GTAGGGTTTATTGCAGTGGTTCATCTGAAGGCTGGATTCCATTTGAAGAGCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp GGGACTTCAGTCTGTACGTTTTGTACCAACTCACTGGATCTGGACAGTGGGCAGTCTATTGTTTTAAAGTaGAACCTCATCAGCACCCAG +
Preference number: 4 (lower is better)
Translates to: GTSVCTFCTNSLDLDSGQSIVLK*NLISTQ
Trigger: CTGGGTGCTGATGAGGTTTCACTTTAAAACAATAGA...CTGCCCACTGTCCAGATCCAGTGAGTTGGTACAAAACGTACAGACTGAAGTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp TATGCTCTTCAAATGGAATCCAGCCTTCAGATGAACCACTGCAATAAACCCTACAGATGCTTCAGTACGTaGGCCTGTGTGGGGATCAGA +
Preference number: 4 (lower is better)
Translates to: YALQMESSLQMNHCNKPYRCFST*ACVGIR
Trigger: TCTGATCCCCACACAGGCTCACGTACTGAAGCATCT...GTAGGGTTTATTGCAGTGGTTCATCTGAAGGCTGGATTCCATTTGAAGAGCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp TCAGGAGACATTTCATTTGTGTCTGGGACATGGGAATGTCCTGAACTAATCTTGGGTCAGGCCCAAAGCTaGTCTCACCCATTTGATTCC +
Preference number: 4 (lower is better)
Translates to: SGDISFVSGTWECPELILGQAQS*SHPFDS
Trigger: GGAATCAAATGGGTGAGATCAGCTTTGGGCCTGACC...CAAGATTAGTTCAGGACATTCCCATGTCCCAGACACAAATGAAATGTCTCCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp GTGGGAGAATACAGGATGGAAAAGCAGACTTCCACGTATTTTCACTTAACTGCACAGATTTGGATGGGCTaGAGGCTTTACCAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: VGEYRMEKQTSTYFHLTAQIWMG*RLYQCG
Trigger: CCCACACTGGTAAAGCCTGCAGCCCATCCAAATCTG...TGCAGTTAAGTGAAAATACGTGGAAGTCTGCTTTTCCATCCTGTATTCTCCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp TGGGCCTTTCAAGATTATTACAGACAACTCCAAGTAGCTAGAGGCCTGGCCTTAACCACAGCCTTTCAGTaGCTTATTTTCACCTTGGGG +
Preference number: 4 (lower is better)
Translates to: WAFQDYYRQLQVARGLALTTAFQ*LIFTLG
Trigger: CCCCAAGGTGAAAATAAGGCACTGAAAGGCTGTGGT...TAAGGCCAGGCCTCTAGCTACTTGGAGTTGTCTGTAATAATCTTGAAAGGCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp TCTGTTTATGCTCTTCAAATGGAATCCAGCCTTCAGATGAACCACTGCAATAAAGTGTCCACTGGGAGGTaGAAGGTGCCTTCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: SVYALQMESSLQMNHCNKVSTGR*KVPSVP
Trigger: TGGCACTGAAGGCACCTTCCACCTCCCAGTGGACAC...TTTATTGCAGTGGTTCATCTGAAGGCTGGATTCCATTTGAAGAGCATAAACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR CCA 90 bp TCAGGAGACATTTCATTTGTGTCTGGGACATGGGAATGTCCTGAACTAATCTTGCGGTGGGACCTTGTATaGTGTCCCCGCAGTATATCT +
Preference number: 4 (lower is better)
Translates to: SGDISFVSGTWECPELILRWDLV*CPRSIS
Trigger: AGATATACTGCGGGGACACCATACAAGGTCCCACCG...CAAGATTAGTTCAGGACATTCCCATGTCCCAGACACAAATGAAATGTCTCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp GTGGGAGAATACAGGATGGAAAAGCAGACTTCCACGTATTTTCACTTAACTGCAGGAGCAGTGTTACTCTaGGTCGGTGGGACCTTGTAT +
Preference number: 4 (lower is better)
Translates to: VGEYRMEKQTSTYFHLTAGAVLL*VGGTLY
Trigger: ATACAAGGTCCCACCGACCCAGAGTAACACTGCTCC...TGCAGTTAAGTGAAAATACGTGGAAGTCTGCTTTTCCATCCTGTATTCTCCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CTGCTCAACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCTTCAAGTAGGCACTTCTGATTaGATACATGGCCGTCTGATA +
Preference number: 4 (lower is better)
Translates to: LLNSSEFLPWTTSVYALQVGTSD*IHGRLI
Trigger: TATCAGACGGCCATGTATCCAATCAGAAGTGCCTAC...TTGAAGAGCATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGTTGAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CTTGCACTTCCGTTGTCTCTTCTTGCAAATAGAGGTGGTGCTGCTAGGGAACTGTTTGTGTCTGGGACATaGGAATGTCCTGAACTAATC +
Preference number: 4 (lower is better)
Translates to: LALPLSLLANRGGAARELFVSGT*ECPELI
Trigger: GATTAGTTCAGGACATTCCCATGTCCCAGACACAAA...CAGTTCCCTAGCAGCACCACCTCTATTTGCAAGAAGAGACAACGGAAGTGCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR CCA 90 bp ACAGCAAGGATATCCAGGGACTATCCATGTGGCCATAGGGAAGCAAGTGCTGTTCTTGGTCTGTTGCAATaGTTCTCAGGAGACATTTCA +
Preference number: 4 (lower is better)
Translates to: TARISRDYPCGHREASAVLGLLQ*FSGDIS
Trigger: TGAAATGTCTCCTGAGAACCATTGCAACAGACCAAG...AACAGCACTTGCTTCCCTATGGCCACATGGATAGTCCCTGGATATCCTTGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp TCAGGAGACATTTCATTTGTGTCTGGGACATGGGAATGTCCTGAACTAATCTTGCTGCCAGCACCCACCTaGAATGTGGTTCCTTCACTT +
Preference number: 4 (lower is better)
Translates to: SGDISFVSGTWECPELILLPAPT*NVVPSL
Trigger: AAGTGAAGGAACCACATTCCAGGTGGGTGCTGGCAG...CAAGATTAGTTCAGGACATTCCCATGTCCCAGACACAAATGAAATGTCTCCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp TATGCTCTTCAAATGGAATCCAGCCTTCAGATGAACCACTGCAATAAACCCTACTTCAACCCCCGCCTTTaGAGTCCGTGGAGGAAAAGA +
Preference number: 4 (lower is better)
Translates to: YALQMESSLQMNHCNKPYFNPRL*SPWRKR
Trigger: TCTTTTCCTCCACGGACTCCAAAGGCGGGGGTTGAA...GTAGGGTTTATTGCAGTGGTTCATCTGAAGGCTGGATTCCATTTGAAGAGCATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp TCTGTTTATGCTCTTCAAATGGAATCCAGCCTTCAGATGAACCACTGCAATAAAGAGGGGTTTGCATCCTaGGGCCAGTGCTGTAGCTCA +
Preference number: 4 (lower is better)
Translates to: SVYALQMESSLQMNHCNKEGFAS*GQCCSS
Trigger: TGAGCTACAGCACTGGCCCCAGGATGCAAACCCCTC...TTTATTGCAGTGGTTCATCTGAAGGCTGGATTCCATTTGAAGAGCATAAACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CTTCAGATGAACCACTGCAATAAACCCTACTCTCTGCTTGCCTCTAGACTGGGAATACCAAAAACGCTCTaGACAGGTGTGTGTGTCTCT +
Preference number: 4 (lower is better)
Translates to: LQMNHCNKPYSLLASRLGIPKTL*TGVCVS
Trigger: AGAGACACACACACCTGTCCAGAGCGTTTTTGGTAT...TCCCAGTCTAGAGGCAAGCAGAGAGTAGGGTTTATTGCAGTGGTTCATCTGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp TCAGGAGACATTTCATTTGTGTCTGGGACATGGGAATGTCCTGAACTAATCTTGACTGGATCTGGACAGTaGGCAGGCTCTCAGGGATTA +
Preference number: 4 (lower is better)
Translates to: SGDISFVSGTWECPELILTGSGQ*AGSQGL
Trigger: TAATCCCTGAGAGCCTGCCCACTGTCCAGATCCAGT...CAAGATTAGTTCAGGACATTCCCATGTCCCAGACACAAATGAAATGTCTCCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp TCAGGAGACATTTCATTTGTGTCTGGGACATGGGAATGTCCTGAACTAATCTTGTTGGAACAATTCGGGTaGCCAGGGGTAAGGATGCTC +
Preference number: 4 (lower is better)
Translates to: SGDISFVSGTWECPELILLEQFG*PGVRML
Trigger: GAGCATCCTTACCCCTGGCCACCCGAATTGTTCCAA...CAAGATTAGTTCAGGACATTCCCATGTCCCAGACACAAATGAAATGTCTCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CTGCTCAACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCTTCAATGGGAGAATACAGGATaGAAAAGCAGACTTCCACGT +
Preference number: 4 (lower is better)
Translates to: LLNSSEFLPWTTSVYALQWENTG*KSRLPR
Trigger: ACGTGGAAGTCTGCTTTTCCATCCTGTATTCTCCCA...TTGAAGAGCATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGTTGAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCTTCAAATGGAATCCAGCCCAGCCAGTAGTGATGTaGGAGAATACAGGATGGAAA +
Preference number: 4 (lower is better)
Translates to: LSSYPGPHLFMLFKWNPAQPVVM*ENTGWK
Trigger: TTTCCATCCTGTATTCTCCCACATCACTACTGGCTG...GGCTGGATTCCATTTGAAGAGCATAAACAGATGTGGTCCAGGGTAGGAACTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CAA 72 bp AAGCAGATGCCTTTAAGTCAGGATGGGGACAGGCCCTaGGGCCTTTCAAGATTATTACAGACAACTCCAAGT +
Preference number: 4 (lower is better)
Translates to: KQMPLSQDGDRP*GLSRLLQTTPS
Trigger: ACTTGGAGTTGTCTGTAATAATCTTGAAAGGCCCAAGGGCCTGTCCCCATCCTGACTTAAAGGCATCTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp ACCAGCATGCTGCTCACTGTGGGCCTGTTCCCTTCCATAACCTGTTTCCTCATTGACTTTTCCAAGCCTTaGTTTCCTTATGGATCAAAT +
Preference number: 4 (lower is better)
Translates to: TSMLLTVGLFPSITCFLIDFSKP*FPYGSN
Trigger: ATTTGATCCATAAGGAAATCAAGGCTTGGAAAAGTC...AATGAGGAAACAGGTTATGGAAGGGAACAGGCCCACAGTGAGCAGCATGCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp ACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCTTCAAATGGAATCTCTGTCATGTGATATaGAACAGGGAAGCAGATGCC +
Preference number: 4 (lower is better)
Translates to: TALSSYPGPHLFMLFKWNLCHVI*NREADA
Trigger: GGCATCTGCTTCCCTGTTTCATATCACATGACAGAG...ATTCCATTTGAAGAGCATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp CGTGCTGTCCTTGAACATGTCTTCGGTCCTGGGCATTGTGACCCCAAAGTGTTTTTCAATCTTTCAGAGTaGTCACTGTCTGATCTTCAA +
Preference number: 4 (lower is better)
Translates to: RAVLEHVFGPGHCDPKVFFNLSE*SLSDLQ
Trigger: TTGAAGATCAGACAGTGATCACTCTGAAAGATTGAA...AAACACTTTGGGGTCACAATGCCCAGGACCGAAGACATGTTCAAGGACAGCACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp CCTTGGGCCTTTCAAGATTATTACAGACAACTCCAAGTAGCTAGAGGCCTGGCCGACCACATCTGTTTATaGTCTTCAAATGGAATCCAG +
Preference number: 4 (lower is better)
Translates to: PWAFQDYYRQLQVARGLADHICL*SSNGIQ
Trigger: CTGGATTCCATTTGAAGAGCATAAACAGATGTGGTC...GGCCAGGCCTCTAGCTACTTGGAGTTGTCTGTAATAATCTTGAAAGGCCCAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp TCAGGAGACATTTCATTTGTGTCTGGGACATGGGAATGTCCTGAACTAATCTTGCCTAGAGATGTAGCCTaGTCAACAGCTCTGAGTTCC +
Preference number: 4 (lower is better)
Translates to: SGDISFVSGTWECPELILPRDVA*STALSS
Trigger: GGAACTCAGAGCTGTTGAGCAGGCTACATCTCTAGG...CAAGATTAGTTCAGGACATTCCCATGTCCCAGACACAAATGAAATGTCTCCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR GCA 90 bp GTGGGAGAATACAGGATGGAAAAGCAGACTTCCACGTATTTTCACTTAACTGCACCTAGAGATGTAGCCTaGTCAACAGCTCTGAGTTCC +
Preference number: 4 (lower is better)
Translates to: VGEYRMEKQTSTYFHLTAPRDVA*STALSS
Trigger: GGAACTCAGAGCTGTTGAGCAGGCTACATCTCTAGG...TGCAGTTAAGTGAAAATACGTGGAAGTCTGCTTTTCCATCCTGTATTCTCCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp CTGCTCAACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCTTCAATTGTTCTTGGTCTGTTaGAATGGTTCTCAGGAGACA +
Preference number: 4 (lower is better)
Translates to: LLNSSEFLPWTTSVYALQLFLVC*NGSQET
Trigger: TGTCTCCTGAGAACCATTGCAACAGACCAAGAACAA...TTGAAGAGCATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGTTGAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR GCA 90 bp TCTGTTTATGCTCTTCAAATGGAATCCAGCCTTCAGATGAACCACTGCAATAAAAGGTCCAGGGCCAGATaGTTTGGCCAGAGACCTTTC +
Preference number: 4 (lower is better)
Translates to: SVYALQMESSLQMNHCNKRSRAR*FGQRPF
Trigger: GAAAGGTCTCTGGCCAAAGCATCTGGCCCTGGACCT...TTTATTGCAGTGGTTCATCTGAAGGCTGGATTCCATTTGAAGAGCATAAACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR GCA 90 bp TATGCTCTTCAAATGGAATCCAGCCTTCAGATGAACCACTGCAATAAACCCTACATACTGAAAAAGGGGTaGTGGACCTGGGCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: YALQMESSLQMNHCNKPYILKKG*WTWALP
Trigger: TGGAAGAGCCCAGGTCCAGCACCCCTTTTTCAGTAT...GTAGGGTTTATTGCAGTGGTTCATCTGAAGGCTGGATTCCATTTGAAGAGCATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp TGGGCCTTTCAAGATTATTACAGACAACTCCAAGTAGCTAGAGGCCTGGCCTTATTGGACTCAACAGCATaGACCACAGAAGATATCCAC +
Preference number: 4 (lower is better)
Translates to: WAFQDYYRQLQVARGLALLDSTA*TTEDIH
Trigger: GTGGATATCTTCTGTGGTGCATGCTGTTGAGTCCAA...TAAGGCCAGGCCTCTAGCTACTTGGAGTTGTCTGTAATAATCTTGAAAGGCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp TCAGGAGACATTTCATTTGTGTCTGGGACATGGGAATGTCCTGAACTAATCTTGCATAACTGGGACTATTaGTGGGGTACAGGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: SGDISFVSGTWECPELILHNWDY*WGTGWD
Trigger: ATCCCAGCCTGTACCCCACCAATAGTCCCAGTTATG...CAAGATTAGTTCAGGACATTCCCATGTCCCAGACACAAATGAAATGTCTCCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR CCA 90 bp TATGCTCTTCAAATGGAATCCAGCCTTCAGATGAACCACTGCAATAAACCCTACTCCCTTAGGGAGACATaGGAGGTTGGGGTAAGGATA +
Preference number: 4 (lower is better)
Translates to: YALQMESSLQMNHCNKPYSLRET*EVGVRI
Trigger: TATCCTTACCCCAACCTCCCATGTCTCCCTAAGGGA...GTAGGGTTTATTGCAGTGGTTCATCTGAAGGCTGGATTCCATTTGAAGAGCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp GTGGGAGAATACAGGATGGAAAAGCAGACTTCCACGTATTTTCACTTAACTGCAGCTTGGCTAGGCTTGTaGATCTCCATCACAGCAAGA +
Preference number: 4 (lower is better)
Translates to: VGEYRMEKQTSTYFHLTAAWLGL*ISITAR
Trigger: TCTTGCTGTGATGGAGATCCACAAGCCTAGCCAAGC...TGCAGTTAAGTGAAAATACGTGGAAGTCTGCTTTTCCATCCTGTATTCTCCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp ACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCTTCAAATGGAATGCTCATTACAGGTCCTaGCCCAAAGCAGTTCATACA +
Preference number: 4 (lower is better)
Translates to: TALSSYPGPHLFMLFKWNAHYRS*PKAVHT
Trigger: TGTATGAACTGCTTTGGGCCAGGACCTGTAATGAGC...ATTCCATTTGAAGAGCATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CCTTGGGCCTTTCAAGATTATTACAGACAACTCCAAGTAGCTAGAGGCCTGGCCAGGAATTTTGAAGGCTaGGTCCTGGAACCATATAAT +
Preference number: 4 (lower is better)
Translates to: PWAFQDYYRQLQVARGLARNFEG*VLEPYN
Trigger: ATTATATGGTTCCAGGACCCAGCCTTCAAAATTCCT...GGCCAGGCCTCTAGCTACTTGGAGTTGTCTGTAATAATCTTGAAAGGCCCAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CAA 72 bp CCATTAAAGATGCATAAAGTGACCCTTGCACTTCCGTaGTCTCTTCTTGCAAATAGAGGTGGTGCTGCTAGG +
Preference number: 4 (lower is better)
Translates to: PLKMHKVTLALP*SLLANRGGAAR
Trigger: CCTAGCAGCACCACCTCTATTTGCAAGAAGAGACAACGGAAGTGCAAGGGTCACTTTATGCATCTTTAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR TCA 90 bp CCATTATGTTTCAGGCTTTCACTATTTGCAGGCAATCCAGCTCCCAGACTCAAAGGATGTTACATGCCATaGGAACAGGTTTCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: PLCFRLSLFAGNPAPRLKGCYMP*EQVSLS
Trigger: TGACAGAGAAACCTGTTCTCATGGCATGTAACATCC...TTTGAGTCTGGGAGCTGGATTGCCTGCAAATAGTGAAAGCCTGAAACATAATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp TATGCTCTTCAAATGGAATCCAGCCTTCAGATGAACCACTGCAATAAACCCTACAATGGATTTCAACTCTaGATGGCCTCACTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: YALQMESSLQMNHCNKPYNGFQL*MASLCS
Trigger: GGAGCACAGTGAGGCCATTCAGAGTTGAAATCCATT...GTAGGGTTTATTGCAGTGGTTCATCTGAAGGCTGGATTCCATTTGAAGAGCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp CTGCTCAACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCTTCAAGACCACATCTGTTTATaGTCTTCAAATGGAATCCAG +
Preference number: 4 (lower is better)
Translates to: LLNSSEFLPWTTSVYALQDHICL*SSNGIQ
Trigger: CTGGATTCCATTTGAAGAGCATAAACAGATGTGGTC...TTGAAGAGCATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGTTGAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR GCA 90 bp TGGGCCTTTCAAGATTATTACAGACAACTCCAAGTAGCTAGAGGCCTGGCCTTATTGTTCTTGGTCTGTTaGAATGGTTCTCAGGAGACA +
Preference number: 4 (lower is better)
Translates to: WAFQDYYRQLQVARGLALLFLVC*NGSQET
Trigger: TGTCTCCTGAGAACCATTGCAACAGACCAAGAACAA...TAAGGCCAGGCCTCTAGCTACTTGGAGTTGTCTGTAATAATCTTGAAAGGCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp CTTCAGATGAACCACTGCAATAAACCCTACTCTCTGCTTGCCTCTAGACTGGGACAAAACCAAAGAGGGTaGAAGGAGGTATTTGCAAAA +
Preference number: 4 (lower is better)
Translates to: LQMNHCNKPYSLLASRLGQNQRG*KEVFAK
Trigger: TTTTGCAAATACCTCCTTCCACCCTCTTTGGTTTTG...TCCCAGTCTAGAGGCAAGCAGAGAGTAGGGTTTATTGCAGTGGTTCATCTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp TGTTTCCTCATTTGTCAATTGACTGTAATAACTCTAACCCTGTCCCTCTCAGGGATGGGGACAGGCCCTTaGGCCTTTCAAGATTATTAC +
Preference number: 4 (lower is better)
Translates to: CFLICQLTVITLTLSLSGMGTGP*AFQDYY
Trigger: GTAATAATCTTGAAAGGCCCAAGGGCCTGTCCCCAT...CCCTGAGAGGGACAGGGTTAGAGTTATTACAGTCAATTGACAAATGAGGAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CAA 72 bp AAGCTGCTAATAACACGCCTACATACTCAGGTGGTTTaGTTCTTGGTCTGTTGCAATGGTTCTCAGGAGACA +
Preference number: 4 (lower is better)
Translates to: KLLITRLHTQVV*FLVCCNGSQET
Trigger: TGTCTCCTGAGAACCATTGCAACAGACCAAGAACAAAACCACCTGAGTATGTAGGCGTGTTATTAGCAGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
3UTR CAA 72 bp TGTGGGCCTGTTCCCTTCCATAACCTGTTTCCTCATTaGTCAATTGACTGTAATAACTCTAACCCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: CGPVPFHNLFPH*SIDCNNSNPVP
Trigger: AGGGACAGGGTTAGAGTTATTACAGTCAATTGACAAATGAGGAAACAGGTTATGGAAGGGAACAGGCCCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp TCAGGAGACATTTCATTTGTGTCTGGGACATGGGAATGTCCTGAACTAATCTTGCACCGGTGTAAGACTTaGGTAGTTGCATACAATGTG +
Preference number: 4 (lower is better)
Translates to: SGDISFVSGTWECPELILHRCKT*VVAYNV
Trigger: CACATTGTATGCAACTACTCAAGTCTTACACCGGTG...CAAGATTAGTTCAGGACATTCCCATGTCCCAGACACAAATGAAATGTCTCCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR TCA 90 bp TCTGTTTATGCTCTTCAAATGGAATCCAGCCTTCAGATGAACCACTGCAATAAAGTACATGAAAGGCCGTaGAGTGCTTTGACCTCTGTG +
Preference number: 4 (lower is better)
Translates to: SVYALQMESSLQMNHCNKVHERP*SALTSV
Trigger: CACAGAGGTCAAAGCACTTCACGGCCTTTCATGTAC...TTTATTGCAGTGGTTCATCTGAAGGCTGGATTCCATTTGAAGAGCATAAACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp TATGCTCTTCAAATGGAATCCAGCCTTCAGATGAACCACTGCAATAAACCCTACACTTTTTGTCTAGCTTaGCCACCGTGCCATCTAGAA +
Preference number: 4 (lower is better)
Translates to: YALQMESSLQMNHCNKPYTFCLA*PPCHLE
Trigger: TTCTAGATGGCACGGTGGTCAAGCTAGACAAAAAGT...GTAGGGTTTATTGCAGTGGTTCATCTGAAGGCTGGATTCCATTTGAAGAGCATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp TATGCTCTTCAAATGGAATCCAGCCTTCAGATGAACCACTGCAATAAACCCTACATAAACCCTACTCTCTaGTTGCCTCTAGACTGGGAT +
Preference number: 4 (lower is better)
Translates to: YALQMESSLQMNHCNKPYINPTL*LPLDWD
Trigger: ATCCCAGTCTAGAGGCAAGCAGAGAGTAGGGTTTAT...GTAGGGTTTATTGCAGTGGTTCATCTGAAGGCTGGATTCCATTTGAAGAGCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR GCA 90 bp TCAGGAGACATTTCATTTGTGTCTGGGACATGGGAATGTCCTGAACTAATCTTGCAGTTAACATCACTGTaGAAATCAGAAGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: SGDISFVSGTWECPELILQLTSL*KSEGPG
Trigger: CCCTGGACCTTCTGATTTGCACAGTGATGTTAACTG...CAAGATTAGTTCAGGACATTCCCATGTCCCAGACACAAATGAAATGTCTCCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR CCA 90 bp TGTTTCCTCATTTGTCAATTGACTGTAATAACTCTAACCCTGTCCCTCTCAGGGGTAGGCACTTCTGATTaGATACATGGCCGTCTGATA +
Preference number: 4 (lower is better)
Translates to: CFLICQLTVITLTLSLSGVGTSD*IHGRLI
Trigger: TATCAGACGGCCATGTATCCAATCAGAAGTGCCTAC...CCCTGAGAGGGACAGGGTTAGAGTTATTACAGTCAATTGACAAATGAGGAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp TCTGTTTATGCTCTTCAAATGGAATCCAGCCTTCAGATGAACCACTGCAATAAATTTGTACCAACTCACTaGATCTGGACAGTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: SVYALQMESSLQMNHCNKFVPTH*IWTVGR
Trigger: CCTGCCCACTGTCCAGATCCAGTGAGTTGGTACAAA...TTTATTGCAGTGGTTCATCTGAAGGCTGGATTCCATTTGAAGAGCATAAACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp ACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCTTCAAATGGAATTTGAAGGCTGGGTCCTaGAACCATATAATGCCTAAT +
Preference number: 4 (lower is better)
Translates to: TALSSYPGPHLFMLFKWNLKAGS*NHIMPN
Trigger: ATTAGGCATTATATGGTTCCAGGACCCAGCCTTCAA...ATTCCATTTGAAGAGCATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CAA 72 bp AAAATGGAGGACTTTGGCAACCAATGTCAAAGTACTTaGCATACCAAAAACGCTCTGGACAGGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: KMEDFGNQCQST*HTKNALDRCVC
Trigger: ACACACACACCTGTCCAGAGCGTTTTTGGTATGCAAAGTACTTTGACATTGGTTGCCAAAGTCCTCCATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp TGGGCCTTTCAAGATTATTACAGACAACTCCAAGTAGCTAGAGGCCTGGCCTTAGTCCCTTCAGTTCCATaGGTCTATGAAATGTTTATT +
Preference number: 4 (lower is better)
Translates to: WAFQDYYRQLQVARGLALVPSVP*VYEMFI
Trigger: AATAAACATTTCATAGACTCATGGAACTGAAGGGAC...TAAGGCCAGGCCTCTAGCTACTTGGAGTTGTCTGTAATAATCTTGAAAGGCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp CCATTATGTTTCAGGCTTTCACTATTTGCAGGCAATCCAGCTCCCAGACTCAAATCACTTAACTGCAATTaGGGAGGAATTCTGATACAG +
Preference number: 4 (lower is better)
Translates to: PLCFRLSLFAGNPAPRLKSLNCN*GGILIQ
Trigger: CTGTATCAGAATTCCTCCTCAATTGCAGTTAAGTGA...TTTGAGTCTGGGAGCTGGATTGCCTGCAAATAGTGAAAGCCTGAAACATAATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp TGTTTCCTCATTTGTCAATTGACTGTAATAACTCTAACCCTGTCCCTCTCAGGGCTTCAGATGAACCACTaGAATAAACCCTACTCTCTG +
Preference number: 4 (lower is better)
Translates to: CFLICQLTVITLTLSLSGLQMNH*NKPYSL
Trigger: CAGAGAGTAGGGTTTATTGCAGTGGTTCATCTGAAG...CCCTGAGAGGGACAGGGTTAGAGTTATTACAGTCAATTGACAAATGAGGAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp TCTGTTTATGCTCTTCAAATGGAATCCAGCCTTCAGATGAACCACTGCAATAAACTCCCAATAGAAAGATaGCTCGTGCTGTCCTTGAAC +
Preference number: 4 (lower is better)
Translates to: SVYALQMESSLQMNHCNKLPIER*LVLSLN
Trigger: GTTCAAGGACAGCACGAGGCATCTTTCTATTGGGAG...TTTATTGCAGTGGTTCATCTGAAGGCTGGATTCCATTTGAAGAGCATAAACAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp TCAGGAGACATTTCATTTGTGTCTGGGACATGGGAATGTCCTGAACTAATCTTGTTTGTGTCTGGGACATaGGAATGTCCTGAACTAATC +
Preference number: 4 (lower is better)
Translates to: SGDISFVSGTWECPELILFVSGT*ECPELI
Trigger: GATTAGTTCAGGACATTCCCATGTCCCAGACACAAA...CAAGATTAGTTCAGGACATTCCCATGTCCCAGACACAAATGAAATGTCTCCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR TCA 90 bp TCTGTTTATGCTCTTCAAATGGAATCCAGCCTTCAGATGAACCACTGCAATAAACACCGGTGTAAGACTTaGGTAGTTGCATACAATGTG +
Preference number: 4 (lower is better)
Translates to: SVYALQMESSLQMNHCNKHRCKT*VVAYNV
Trigger: CACATTGTATGCAACTACTCAAGTCTTACACCGGTG...TTTATTGCAGTGGTTCATCTGAAGGCTGGATTCCATTTGAAGAGCATAAACAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR TCA 90 bp TGTTTCCTCATTTGTCAATTGACTGTAATAACTCTAACCCTGTCCCTCTCAGGGTCACTTAACTGCAATTaGGGAGGAATTCTGATACAG +
Preference number: 4 (lower is better)
Translates to: CFLICQLTVITLTLSLSGSLNCN*GGILIQ
Trigger: CTGTATCAGAATTCCTCCTCAATTGCAGTTAAGTGA...CCCTGAGAGGGACAGGGTTAGAGTTATTACAGTCAATTGACAAATGAGGAAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp TCAGGAGACATTTCATTTGTGTCTGGGACATGGGAATGTCCTGAACTAATCTTGAGGAATTTTGAAGGCTaGGTCCTGGAACCATATAAT +
Preference number: 4 (lower is better)
Translates to: SGDISFVSGTWECPELILRNFEG*VLEPYN
Trigger: ATTATATGGTTCCAGGACCCAGCCTTCAAAATTCCT...CAAGATTAGTTCAGGACATTCCCATGTCCCAGACACAAATGAAATGTCTCCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp TCTGTTTATGCTCTTCAAATGGAATCCAGCCTTCAGATGAACCACTGCAATAAAGCTTTATTGCGCGGATaGCTCAATGGATTTCAACTC +
Preference number: 4 (lower is better)
Translates to: SVYALQMESSLQMNHCNKALLRG*LNGFQL
Trigger: GAGTTGAAATCCATTGAGCCATCCGCGCAATAAAGC...TTTATTGCAGTGGTTCATCTGAAGGCTGGATTCCATTTGAAGAGCATAAACAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR TCA 90 bp TCAGGAGACATTTCATTTGTGTCTGGGACATGGGAATGTCCTGAACTAATCTTGTTCAATCTTTCAGAGTaGTCACTGTCTGATCTTCAA +
Preference number: 4 (lower is better)
Translates to: SGDISFVSGTWECPELILFNLSE*SLSDLQ
Trigger: TTGAAGATCAGACAGTGATCACTCTGAAAGATTGAA...CAAGATTAGTTCAGGACATTCCCATGTCCCAGACACAAATGAAATGTCTCCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR GCA 90 bp TCTGTTTATGCTCTTCAAATGGAATCCAGCCTTCAGATGAACCACTGCAATAAATTGTTCTTGGTCTGTTaGAATGGTTCTCAGGAGACA +
Preference number: 4 (lower is better)
Translates to: SVYALQMESSLQMNHCNKLFLVC*NGSQET
Trigger: TGTCTCCTGAGAACCATTGCAACAGACCAAGAACAA...TTTATTGCAGTGGTTCATCTGAAGGCTGGATTCCATTTGAAGAGCATAAACAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR GCA 90 bp TATGCTCTTCAAATGGAATCCAGCCTTCAGATGAACCACTGCAATAAACCCTACAATGTCAAAGTACTTTaGATACCAAAAACGCTCTGG +
Preference number: 4 (lower is better)
Translates to: YALQMESSLQMNHCNKPYNVKVL*IPKTLW
Trigger: CCAGAGCGTTTTTGGTATGCAAAGTACTTTGACATT...GTAGGGTTTATTGCAGTGGTTCATCTGAAGGCTGGATTCCATTTGAAGAGCATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CCA 90 bp TCTGTTTATGCTCTTCAAATGGAATCCAGCCTTCAGATGAACCACTGCAATAAACTTGGTCTGTTGCAATaGTTCTCAGGAGACATTTCA +
Preference number: 4 (lower is better)
Translates to: SVYALQMESSLQMNHCNKLGLLQ*FSGDIS
Trigger: TGAAATGTCTCCTGAGAACCATTGCAACAGACCAAG...TTTATTGCAGTGGTTCATCTGAAGGCTGGATTCCATTTGAAGAGCATAAACAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
3UTR CAA 72 bp CTTCAGTTCCATGAGTCTATGAAATGTTTATTGCTATaGCTTTTCCTTCACTATCCTCACCTTCAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: LQFHESMKCLLL*LFLHYPHLQSC
Trigger: GCAGCTCTGAAGGTGAGGATAGTGAAGGAAAAGCAATAGCAATAAACATTTCATAGACTCATGGAACTGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CAA 72 bp TGTCAGATCAGCTGTAAGATGTACCATAGGTTTTTCTaGACTACTGAGAACAAATTTAGCATCAACTTGGGG +
Preference number: 4 (lower is better)
Translates to: CQISCKMYHRFF*TTENKFSINLG
Trigger: CCCCAAGTTGATGCTAAATTTGTTCTCAGTAGTCAAGAAAAACCTATGGTACATCTTACAGCTGATCTGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CAA 72 bp ATGGGGCTTTCCAATCTTTACACTCCGGACTGTGTTTaGAAAACACCTATAAATTCTTTGATCAAACTACTT +
Preference number: 4 (lower is better)
Translates to: MGLSNLYTPDCV*KTPINSLIKLL
Trigger: AAGTAGTTTGATCAAAGAATTTATAGGTGTTTTCAAAACACAGTCCGGAGTGTAAAGATTGGAAAGCCCCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
3UTR CAA 72 bp TCTACAGCTTACAGTAAATACCATAGTTACAAATTCTaGGCTTCAATCTTTCAGAGTGATCACTGTCTGATC +
Preference number: 4 (lower is better)
Translates to: STAYSKYHSYKF*ASIFQSDHCLI
Trigger: GATCAGACAGTGATCACTCTGAAAGATTGAAGCCAAGAATTTGTAACTATGGTATTTACTGTAAGCTGTAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS CCA 90 bp CTCCGGAGGCTACGGCGGCGACGCTCTCGCCCGTGTCCAGTAGGGTaGCGGATGGCGCGCGGGGACCGGAGCCTCCTCCTCAGCGACTCG +
Preference number: 5 (lower is better)
Translates to: LRRLRRRRSRPCPVG*RMARGDRSLLLSDS
Trigger: CGAGTCGCTGAGGAGGAGGCTCCGGTCCCCGCGCGCCATCCGCCACCCTACTGGACACGGGCGAGAGCGTCGCCGCCGTAGCCTCCGGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
ENST00000632101.1
CDS GCA 90 bp TGTAAACAGGGTTCATTGTGGAAGACTGAGGATCCGGTGAGCAGCTaGAGGCGAAAACGGCGGCGGCGGCGGCTGAGGCGGCGATGCCCT +
Preference number: 5 (lower is better)
Translates to: CKQGSLWKTEDPVSS*RRKRRRRRLRRRCP
Trigger: AGGGCATCGCCGCCTCAGCCGCCGCCGCCGCCGTTTTCGCCTGCAGCTGCTCACCGGATCCTCAGTCTTCCACAATGAACCCTGTTTACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS GCA 90 bp CACCATGCCCATGGCCACACCGTTGGTCCTCGGGGCGGCAACAGGTaGTGGGTAGATAGCAGAGGGAATGCTGTTGGGCTGGACGACCGT +
Preference number: 5 (lower is better)
Translates to: HHAHGHTVGPRGGNR*WVDSRGNAVGLDDR
Trigger: ACGGTCGTCCAGCCCAACAGCATTCCCTCTGCTATCTACCCAGCACCTGTTGCCGCCCCGAGGACCAACGGTGTGGCCATGGGCATGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS GCA 90 bp CGCAGGGGTTCCTTGGGCCCTATATGTTGGCATGGAGACAGGGTGTaGCCCAATCGCCGTGTGCTGGGGTGTAGTCAGCAGGGTACCTGC +
Preference number: 5 (lower is better)
Translates to: RRGSLGPICWHGDRV*PNRRVLGCSQQGTC
Trigger: GCAGGTACCCTGCTGACTACACCCCAGCACACGGCGATTGGGGCACACCCTGTCTCCATGCCAACATATAGGGCCCAAGGAACCCCTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp CTTGCTGGGGTCAGGCCCAAAGCTGATCTCACCCATTTGATTCCTATGGGCCGGTCTGGATTCCCAAGCTaGGCAAGCAGCGGGGGCCGC +
Preference number: 5 (lower is better)
Translates to: LAGVRPKADLTHLIPMGRSGFPS*ASSGGR
Trigger: GCGGCCCCCGCTGCTTGCCAAGCTTGGGAATCCAGA...CCGGCCCATAGGAATCAAATGGGTGAGATCAGCTTTGGGCCTGACCCCAGCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp GTGTTTCTTCAGCTCTGCGGGTGGGTCCCAACTGGCCCACTCTACTACTGCCCCCTGGAGATGCTGGTCTaGCTGGGGTCAGGCCCAAAG +
Preference number: 5 (lower is better)
Translates to: VFLQLCGWVPTGPLYYCPLEMLV*LGSGPK
Trigger: CTTTGGGCCTGACCCCAGCAAGACCAGCATCTCCAG...GGGGCAGTAGTAGAGTGGGCCAGTTGGGACCCACCCGCAGAGCTGAAGAAACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS GCA 90 bp GGTAAGTTCGGTTCTCGGTCCCGGTGTCCACTGGGAGGTGGAAGGTaGCTTCAGTGCCACAGGAAGACGAGTTCTGTGGCCAGGCCTGTT +
Preference number: 5 (lower is better)
Translates to: GKFGSRSRCPLGGGR*LQCHRKTSSVARPV
Trigger: AACAGGCCTGGCCACAGAACTCGTCTTCCTGTGGCACTGAAGGCACCTTCCACCTCCCAGTGGACACCGGGACCGAGAACCGAACTTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
ENST00000632101.1
CDS GCA 90 bp CGCAGGGGTTCCTTGGGCCCTATATGTTGGCATGGAGACAGGGTGTaGCCCAATCGCCGTGTGCTGGGGTGTAGTCAGCAGGGTACTGAA +
Preference number: 5 (lower is better)
Translates to: RRGSLGPICWHGDRV*PNRRVLGCSQQGTE
Trigger: TTCAGTACCCTGCTGACTACACCCCAGCACACGGCGATTGGGGCACACCCTGTCTCCATGCCAACATATAGGGCCCAAGGAACCCCTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450446.6
CDS GCA 90 bp GCCCTATATGTTGGCATGGAGACAGGGTGTGCCCCAATCGCCGTGTaGTGGGGTGTAGTCAGCAGGGTACCTGCTGACATTGCCATGGTG +
Preference number: 5 (lower is better)
Translates to: ALYVGMETGCAPIAV*WGVVSRVPADIAMV
Trigger: CACCATGGCAATGTCAGCAGGTACCCTGCTGACTACACCCCAGCACACGGCGATTGGGGCACACCCTGTCTCCATGCCAACATATAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS GCA 90 bp GCCCTATATGTTGGCATGGAGACAGGGTGTGCCCCAATCGCCGTGTaGTGGGGTGTAGTCAGCAGGGTACTGAAAGCCGCAGAGGATGCT +
Preference number: 5 (lower is better)
Translates to: ALYVGMETGCAPIAV*WGVVSRVLKAAEDA
Trigger: AGCATCCTCTGCGGCTTTCAGTACCCTGCTGACTACACCCCAGCACACGGCGATTGGGGCACACCCTGTCTCCATGCCAACATATAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450446.6
CDS CCA 90 bp CGCAGAGGATGCTTGGTAAGTTCGGTTCTCGGTCCCGGTGTCCACTaGGAGGTGGAAGGTGCCTTCAGTGCCACAGGAAGACGAGTTCTG +
Preference number: 5 (lower is better)
Translates to: RRGCLVSSVLGPGVH*EVEGAFSATGRRVL
Trigger: CAGAACTCGTCTTCCTGTGGCACTGAAGGCACCTTCCACCTCCCAGTGGACACCGGGACCGAGAACCGAACTTACCAAGCATCCTCTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
ENST00000632101.1
CDS-3UTR CAA 90 bp CTTGCTGGGGTCAGGCCCAAAGCTGATCTCACCCATTTGATTCCTATGGGCCGGGCAGAGGGAATGCTGTaGGGCTGGACGACCGTGGTA +
Preference number: 5 (lower is better)
Translates to: LAGVRPKADLTHLIPMGRAEGML*GWTTVV
Trigger: TACCACGGTCGTCCAGCCCAACAGCATTCCCTCTGC...CCGGCCCATAGGAATCAAATGGGTGAGATCAGCTTTGGGCCTGACCCCAGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp GGGACTTCAGTCTGTACGTTTTGTACCAACTCACTGGATCTGGACAGTGGGCAGCCCATGGCCACACCGTaGGTCCTCGGGGCGGCAACA +
Preference number: 5 (lower is better)
Translates to: GTSVCTFCTNSLDLDSGQPMATP*VLGAAT
Trigger: TGTTGCCGCCCCGAGGACCAACGGTGTGGCCATGGG...CTGCCCACTGTCCAGATCCAGTGAGTTGGTACAAAACGTACAGACTGAAGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp CTTGCTGGGGTCAGGCCCAAAGCTGATCTCACCCATTTGATTCCTATGGGCCGGCTTCAACCCCCGCCTTaGGAGTCCGTGGAGGAAAAG +
Preference number: 5 (lower is better)
Translates to: LAGVRPKADLTHLIPMGRLQPPP*ESVEEK
Trigger: CTTTTCCTCCACGGACTCCAAAGGCGGGGGTTGAAG...CCGGCCCATAGGAATCAAATGGGTGAGATCAGCTTTGGGCCTGACCCCAGCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp ACTTGGGCCATGAATGGCACAGGTAACCAAGAGCTTGGCCTGCCTGCAAGCTCTCTGGAGATGCTGGTCTaGCTGGGGTCAGGCCCAAAG +
Preference number: 5 (lower is better)
Translates to: TWAMNGTGNQELGLPASSLEMLV*LGSGPK
Trigger: CTTTGGGCCTGACCCCAGCAAGACCAGCATCTCCAG...AGAGCTTGCAGGCAGGCCAAGCTCTTGGTTACCTGTGCCATTCATGGCCCAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS CCA 90 bp TGGGAGGTGGAAGGTGCCTTCAGTGCCACAGGAAGACGAGTTCTGTaGCCAGGCCTGTTTCATCAGCAGAGTTGCTGGAGCATAACTGGG +
Preference number: 5 (lower is better)
Translates to: WEVEGAFSATGRRVL*PGLFHQQSCWSITG
Trigger: CCCAGTTATGCTCCAGCAACTCTGCTGATGAAACAGGCCTGGCCACAGAACTCGTCTTCCTGTGGCACTGAAGGCACCTTCCACCTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356467.5
ENST00000450446.6
CDS-3UTR CAA 90 bp CCTTGGGCCTTTCAAGATTATTACAGACAACTCCAAGTAGCTAGAGGCCTGGCCGAGGCGGCGATGCCCTaGTCTTCTCCGGAGGCTACG +
Preference number: 5 (lower is better)
Translates to: PWAFQDYYRQLQVARGLAEAAMP*SSPEAT
Trigger: CGTAGCCTCCGGAGAAGACAAGGGCATCGCCGCCTC...GGCCAGGCCTCTAGCTACTTGGAGTTGTCTGTAATAATCTTGAAAGGCCCAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp CTTTTCCTTCACTATCCTCACCTTCAGAGCTGCCAGCACCCACCTGGAATGTGGTGGGTCGGTGGGACCTaGTATGGTGTCCCCGCAGTA +
Preference number: 5 (lower is better)
Translates to: LFLHYPHLQSCQHPPGMWWVGGT*YGVPAV
Trigger: TACTGCGGGGACACCATACAAGGTCCCACCGACCCA...CCACATTCCAGGTGGGTGCTGGCAGCTCTGAAGGTGAGGATAGTGAAGGAAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp TTAGGGAAGAGCAGAGAGGACATGGCCTGGTCAGGTAGGAGGAAGGGGATAGAGCCACCCTGCAGCCGCTaGGCAGGTCTAAGGACAAAA +
Preference number: 5 (lower is better)
Translates to: LGKSREDMAWSGRRKGIEPPCSR*AGLRTK
Trigger: TTTTGTCCTTAGACCTGCCAAGCGGCTGCAGGGTGG...CTCTATCCCCTTCCTCCTACCTGACCAGGCCATGTCCTCTCTGCTCTTCCCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp CAGGGCTGGCCATGGAATGTTGAAGCTGGCCTGCCAGGAATTTTGAAGGCTGGGCGGGGTACCTCAAACTaGGAACAATTCGGGTGGCCA +
Preference number: 5 (lower is better)
Translates to: QGWPWNVEAGLPGILKAGRGTSN*EQFGWP
Trigger: TGGCCACCCGAATTGTTCCAAGTTTGAGGTACCCCG...CCCAGCCTTCAAAATTCCTGGCAGGCCAGCTTCAACATTCCATGGCCAGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS CCA 90 bp CAATGTGTGACTCCAGATTTGGATGGGCTGCAGGCTTTACCAGTGTaGGGGCACGTAGCTGTACGCAGGGGTTCCTTGGGCCCTATATGT +
Preference number: 5 (lower is better)
Translates to: QCVTPDLDGLQALPV*GHVAVRRGSLGPIC
Trigger: ACATATAGGGCCCAAGGAACCCCTGCGTACAGCTACGTGCCCCCACACTGGTAAAGCCTGCAGCCCATCCAAATCTGGAGTCACACATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR CAA 90 bp CTGCTCAACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCTTCAAGAGGCGGCGATGCCCTaGTCTTCTCCGGAGGCTACG +
Preference number: 5 (lower is better)
Translates to: LLNSSEFLPWTTSVYALQEAAMP*SSPEAT
Trigger: CGTAGCCTCCGGAGAAGACAAGGGCATCGCCGCCTC...TTGAAGAGCATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGTTGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR CAA 90 bp AAAGTGACCCTTGCACTTCCGTTGTCTCTTCTTGCAAATAGAGGTGGTGCTGCTGAGGCGGCGATGCCCTaGTCTTCTCCGGAGGCTACG +
Preference number: 5 (lower is better)
Translates to: KVTLALPLSLLANRGGAAEAAMP*SSPEAT
Trigger: CGTAGCCTCCGGAGAAGACAAGGGCATCGCCGCCTC...AGCAGCACCACCTCTATTTGCAAGAAGAGACAACGGAAGTGCAAGGGTCACTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR CAA 90 bp ACAGCAAGGATATCCAGGGACTATCCATGTGGCCATAGGGAAGCAAGTGCTGTTCCCCTCCCTCCATGCTaGCCAAGAGACCCAGCAGGT +
Preference number: 5 (lower is better)
Translates to: TARISRDYPCGHREASAVPLPPC*PRDPAG
Trigger: ACCTGCTGGGTCTCTTGGCAAGCATGGAGGGAGGGG...AACAGCACTTGCTTCCCTATGGCCACATGGATAGTCCCTGGATATCCTTGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp CTTCAGATGAACCACTGCAATAAACCCTACTCTCTGCTTGCCTCTAGACTGGGATCTGGATTCCCAAGCTaGGCAAGCAGCGGGGGCCGC +
Preference number: 5 (lower is better)
Translates to: LQMNHCNKPYSLLASRLGSGFPS*ASSGGR
Trigger: GCGGCCCCCGCTGCTTGCCAAGCTTGGGAATCCAGA...TCCCAGTCTAGAGGCAAGCAGAGAGTAGGGTTTATTGCAGTGGTTCATCTGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp CTTTTCCTTCACTATCCTCACCTTCAGAGCTGCCAGCACCCACCTGGAATGTGGGGGTGGGTGCTGAAGTaGCCACTTAAAGCTCCCCAG +
Preference number: 5 (lower is better)
Translates to: LFLHYPHLQSCQHPPGMWGWVLK*PLKAPQ
Trigger: CTGGGGAGCTTTAAGTGGCAACTTCAGCACCCACCC...CCACATTCCAGGTGGGTGCTGGCAGCTCTGAAGGTGAGGATAGTGAAGGAAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS CCA 90 bp CCCTTCCCACTCCATTCGCCACTGCTGTCCCATTTCCTCCTTACCTaGAGCATAACTGGGACTATTGGTGGGGTACAGGCTGGGATTGTA +
Preference number: 5 (lower is better)
Translates to: PFPLHSPLLSHFLLT*SITGTIGGVQAGIV
Trigger: TACAATCCCAGCCTGTACCCCACCAATAGTCCCAGTTATGCTCCAGGTAAGGAGGAAATGGGACAGCAGTGGCGAATGGAGTGGGAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432223.2
CDS CCA 90 bp TGGGAGGTGGAAGGTGCCTTCAGTGCCACAGGAAGACGAGTTCTGTaGCCAGGCCTGTTTCATCAGCAGAGTTGCTTCATGGTGTCCATA +
Preference number: 5 (lower is better)
Translates to: WEVEGAFSATGRRVL*PGLFHQQSCFMVSI
Trigger: TATGGACACCATGAAGCAACTCTGCTGATGAAACAGGCCTGGCCACAGAACTCGTCTTCCTGTGGCACTGAAGGCACCTTCCACCTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000632101.1
CDS-3UTR CAA 90 bp ACAGCAAGGATATCCAGGGACTATCCATGTGGCCATAGGGAAGCAAGTGCTGTTGCAGAGGGAATGCTGTaGGGCTGGACGACCGTGGTA +
Preference number: 5 (lower is better)
Translates to: TARISRDYPCGHREASAVAEGML*GWTTVV
Trigger: TACCACGGTCGTCCAGCCCAACAGCATTCCCTCTGC...AACAGCACTTGCTTCCCTATGGCCACATGGATAGTCCCTGGATATCCTTGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp AATAAACCCTACTCTCTGCTTGCCTCTAGACTGGGATCCCCAGGGACAGGACACCTTGGGCCCTATATGTaGGCATGGAGACAGGGTGTG +
Preference number: 5 (lower is better)
Translates to: NKPYSLLASRLGSPGTGHLGPYM*AWRQGV
Trigger: CACACCCTGTCTCCATGCCAACATATAGGGCCCAAG...GTGTCCTGTCCCTGGGGATCCCAGTCTAGAGGCAAGCAGAGAGTAGGGTTTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR CAA 90 bp CTTTTCCTTCACTATCCTCACCTTCAGAGCTGCCAGCACCCACCTGGAATGTGGGTACGCAGGGGTTCCTaGGGCCCTATATGTTGGCAT +
Preference number: 5 (lower is better)
Translates to: LFLHYPHLQSCQHPPGMWVRRGS*GPICWH
Trigger: ATGCCAACATATAGGGCCCAAGGAACCCCTGCGTAC...CCACATTCCAGGTGGGTGCTGGCAGCTCTGAAGGTGAGGATAGTGAAGGAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp CTTTTCCTTCACTATCCTCACCTTCAGAGCTGCCAGCACCCACCTGGAATGTGGAACCCTACTCTCTGCTaGCCTCTAGACTGGGATCCC +
Preference number: 5 (lower is better)
Translates to: LFLHYPHLQSCQHPPGMWNPTLC*PLDWDP
Trigger: GGGATCCCAGTCTAGAGGCAAGCAGAGAGTAGGGTT...CCACATTCCAGGTGGGTGCTGGCAGCTCTGAAGGTGAGGATAGTGAAGGAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp CGTGCTGTCCTTGAACATGTCTTCGGTCCTGGGCATTGTGACCCCAAAGTGTTTCCACCCTGCAGCCGCTaGGCAGGTCTAAGGACAAAA +
Preference number: 5 (lower is better)
Translates to: RAVLEHVFGPGHCDPKVFPPCSR*AGLRTK
Trigger: TTTTGTCCTTAGACCTGCCAAGCGGCTGCAGGGTGG...AAACACTTTGGGGTCACAATGCCCAGGACCGAAGACATGTTCAAGGACAGCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp ACTTGGGCCATGAATGGCACAGGTAACCAAGAGCTTGGCCTGCCTGCAAGCTCTCAAGCTTGGCTAGGCTaGTGGATCTCCATCACAGCA +
Preference number: 5 (lower is better)
Translates to: TWAMNGTGNQELGLPASSQAWLG*WISITA
Trigger: TGCTGTGATGGAGATCCACAAGCCTAGCCAAGCTTG...AGAGCTTGCAGGCAGGCCAAGCTCTTGGTTACCTGTGCCATTCATGGCCCAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp CAGGGCTGGCCATGGAATGTTGAAGCTGGCCTGCCAGGAATTTTGAAGGCTGGGTCCAGCTCTGACTTTTaGTCTAGCTTGACCACCGTG +
Preference number: 5 (lower is better)
Translates to: QGWPWNVEAGLPGILKAGSSSDF*SSLTTV
Trigger: CACGGTGGTCAAGCTAGACAAAAAGTCAGAGCTGGA...CCCAGCCTTCAAAATTCCTGGCAGGCCAGCTTCAACATTCCATGGCCAGCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp CTTTTCCTTCACTATCCTCACCTTCAGAGCTGCCAGCACCCACCTGGAATGTGGATGAGGAGCCAAAACTaGGTGACCAAGGGGCCTGTC +
Preference number: 5 (lower is better)
Translates to: LFLHYPHLQSCQHPPGMWMRSQN*VTKGPV
Trigger: GACAGGCCCCTTGGTCACCAAGTTTTGGCTCCTCAT...CCACATTCCAGGTGGGTGCTGGCAGCTCTGAAGGTGAGGATAGTGAAGGAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp CAGGGCTGGCCATGGAATGTTGAAGCTGGCCTGCCAGGAATTTTGAAGGCTGGGTGTAAACAGGGTTCATaGTGGAAGACTGAGGATCCG +
Preference number: 5 (lower is better)
Translates to: QGWPWNVEAGLPGILKAGCKQGS*WKTEDP
Trigger: CGGATCCTCAGTCTTCCACAATGAACCCTGTTTACA...CCCAGCCTTCAAAATTCCTGGCAGGCCAGCTTCAACATTCCATGGCCAGCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp TGTTTCCTCATTTGTCAATTGACTGTAATAACTCTAACCCTGTCCCTCTCAGGGCCCATGGCCACACCGTaGGTCCTCGGGGCGGCAACA +
Preference number: 5 (lower is better)
Translates to: CFLICQLTVITLTLSLSGPMATP*VLGAAT
Trigger: TGTTGCCGCCCCGAGGACCAACGGTGTGGCCATGGG...CCCTGAGAGGGACAGGGTTAGAGTTATTACAGTCAATTGACAAATGAGGAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp GGGACTTCAGTCTGTACGTTTTGTACCAACTCACTGGATCTGGACAGTGGGCAGCCAGGGCCAGATGCTTaGGCCAGAGACCTTTCAAAC +
Preference number: 5 (lower is better)
Translates to: GTSVCTFCTNSLDLDSGQPGPDA*ARDLSN
Trigger: GTTTGAAAGGTCTCTGGCCAAAGCATCTGGCCCTGG...CTGCCCACTGTCCAGATCCAGTGAGTTGGTACAAAACGTACAGACTGAAGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp TTAGGGAAGAGCAGAGAGGACATGGCCTGGTCAGGTAGGAGGAAGGGGATAGAGTCAGGCTTTCACTATTaGCAGGCAATCCAGCTCCCA +
Preference number: 5 (lower is better)
Translates to: LGKSREDMAWSGRRKGIESGFHY*QAIQLP
Trigger: TGGGAGCTGGATTGCCTGCAAATAGTGAAAGCCTGA...CTCTATCCCCTTCCTCCTACCTGACCAGGCCATGTCCTCTCTGCTCTTCCCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp CGTGCTGTCCTTGAACATGTCTTCGGTCCTGGGCATTGTGACCCCAAAGTGTTTTGCCTCGTGCTGTCCTaGAACATGTCTTCGGTCCTG +
Preference number: 5 (lower is better)
Translates to: RAVLEHVFGPGHCDPKVFCLVLS*NMSSVL
Trigger: CAGGACCGAAGACATGTTCAAGGACAGCACGAGGCA...AAACACTTTGGGGTCACAATGCCCAGGACCGAAGACATGTTCAAGGACAGCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp CCTTGGGCCTTTCAAGATTATTACAGACAACTCCAAGTAGCTAGAGGCCTGGCCCGGTTGGCCTTTGGGTaGGACTCAACAGCATGCACC +
Preference number: 5 (lower is better)
Translates to: PWAFQDYYRQLQVARGLARLAFG*DSTACT
Trigger: GGTGCATGCTGTTGAGTCCAACCCAAAGGCCAACCG...GGCCAGGCCTCTAGCTACTTGGAGTTGTCTGTAATAATCTTGAAAGGCCCAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp CCTTGGGCCTTTCAAGATTATTACAGACAACTCCAAGTAGCTAGAGGCCTGGCCGGGTGGGTGCTGAAGTaGCCACTTAAAGCTCCCCAG +
Preference number: 5 (lower is better)
Translates to: PWAFQDYYRQLQVARGLAGWVLK*PLKAPQ
Trigger: CTGGGGAGCTTTAAGTGGCAACTTCAGCACCCACCC...GGCCAGGCCTCTAGCTACTTGGAGTTGTCTGTAATAATCTTGAAAGGCCCAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp CCCAGGTTCTCAGCCTGGGGTATTAAGCTGCTAATAACACGCCTACATACTCAGAGCCGCAGAGGATGCTaGGTAAGTTCGGTTCTCGGT +
Preference number: 5 (lower is better)
Translates to: PRFSAWGIKLLITRLHTQSRRGC*VSSVLG
Trigger: ACCGAGAACCGAACTTACCAAGCATCCTCTGCGGCT...CTGAGTATGTAGGCGTGTTATTAGCAGCTTAATACCCCAGGCTGAGAACCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR CAA 90 bp CCCAGGTTCTCAGCCTGGGGTATTAAGCTGCTAATAACACGCCTACATACTCAGCTTGGGCCCTATATGTaGGCATGGAGACAGGGTGTG +
Preference number: 5 (lower is better)
Translates to: PRFSAWGIKLLITRLHTQLGPYM*AWRQGV
Trigger: CACACCCTGTCTCCATGCCAACATATAGGGCCCAAG...CTGAGTATGTAGGCGTGTTATTAGCAGCTTAATACCCCAGGCTGAGAACCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR CAA 90 bp CTTGCACTTCCGTTGTCTCTTCTTGCAAATAGAGGTGGTGCTGCTAGGGAACTGCCAGGGCCAGATGCTTaGGCCAGAGACCTTTCAAAC +
Preference number: 5 (lower is better)
Translates to: LALPLSLLANRGGAARELPGPDA*ARDLSN
Trigger: GTTTGAAAGGTCTCTGGCCAAAGCATCTGGCCCTGG...CAGTTCCCTAGCAGCACCACCTCTATTTGCAAGAAGAGACAACGGAAGTGCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR CAA 90 bp GATGTAGCCTGCTCAACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGCAGGTAACCAAGAGCTaGGCCTGCCTGCAAGCTCTA +
Preference number: 5 (lower is better)
Translates to: DVACSTALSSYPGPHLFMQVTKS*ACLQAL
Trigger: TAGAGCTTGCAGGCAGGCCAAGCTCTTGGTTACCTG...CATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGTTGAGCAGGCTACATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp AAAGTGACCCTTGCACTTCCGTTGTCTCTTCTTGCAAATAGAGGTGGTGCTGCTCTTCAACCCCCGCCTTaGGAGTCCGTGGAGGAAAAG +
Preference number: 5 (lower is better)
Translates to: KVTLALPLSLLANRGGAALQPPP*ESVEEK
Trigger: CTTTTCCTCCACGGACTCCAAAGGCGGGGGTTGAAG...AGCAGCACCACCTCTATTTGCAAGAAGAGACAACGGAAGTGCAAGGGTCACTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp TGTAGCCTGCTCAACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGCTTGCCTCGTGCTGTCCTaGAACATGTCTTCGGTCCTG +
Preference number: 5 (lower is better)
Translates to: CSLLNSSEFLPWTTSVYACLVLS*NMSSVL
Trigger: CAGGACCGAAGACATGTTCAAGGACAGCACGAGGCA...AGCATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGTTGAGCAGGCTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp GATGTAGCCTGCTCAACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGTGCCTCGGTTGGCCTTaGGGTTGGACTCAACAGCAT +
Preference number: 5 (lower is better)
Translates to: DVACSTALSSYPGPHLFMCLGWP*GWTQQH
Trigger: ATGCTGTTGAGTCCAACCCAAAGGCCAACCGAGGCA...CATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGTTGAGCAGGCTACATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp CTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCTTCAAATGGAATCCAGCCAGCCGCAGAGGATGCTaGGTAAGTTCGGTTCTCGGT +
Preference number: 5 (lower is better)
Translates to: LSSYPGPHLFMLFKWNPASRRGC*VSSVLG
Trigger: ACCGAGAACCGAACTTACCAAGCATCCTCTGCGGCT...GGCTGGATTCCATTTGAAGAGCATAAACAGATGTGGTCCAGGGTAGGAACTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR CAA 90 bp CCATTATGTTTCAGGCTTTCACTATTTGCAGGCAATCCAGCTCCCAGACTCAAATGGGTCGGTGGGACCTaGTATGGTGTCCCCGCAGTA +
Preference number: 5 (lower is better)
Translates to: PLCFRLSLFAGNPAPRLKWVGGT*YGVPAV
Trigger: TACTGCGGGGACACCATACAAGGTCCCACCGACCCA...TTTGAGTCTGGGAGCTGGATTGCCTGCAAATAGTGAAAGCCTGAAACATAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp CTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCTTCAAATGGAATCCAGCCCTTGGGCCCTATATGTaGGCATGGAGACAGGGTGTG +
Preference number: 5 (lower is better)
Translates to: LSSYPGPHLFMLFKWNPALGPYM*AWRQGV
Trigger: CACACCCTGTCTCCATGCCAACATATAGGGCCCAAG...GGCTGGATTCCATTTGAAGAGCATAAACAGATGTGGTCCAGGGTAGGAACTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR CAA 90 bp CTGCTCAACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCTTCAAGTACGCAGGGGTTCCTaGGGCCCTATATGTTGGCAT +
Preference number: 5 (lower is better)
Translates to: LLNSSEFLPWTTSVYALQVRRGS*GPICWH
Trigger: ATGCCAACATATAGGGCCCAAGGAACCCCTGCGTAC...TTGAAGAGCATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGTTGAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR CAA 90 bp CTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCTTCAAATGGAATCCAGCCGTACGCAGGGGTTCCTaGGGCCCTATATGTTGGCAT +
Preference number: 5 (lower is better)
Translates to: LSSYPGPHLFMLFKWNPAVRRGS*GPICWH
Trigger: ATGCCAACATATAGGGCCCAAGGAACCCCTGCGTAC...GGCTGGATTCCATTTGAAGAGCATAAACAGATGTGGTCCAGGGTAGGAACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR CAA 90 bp CTTTTCCTTCACTATCCTCACCTTCAGAGCTGCCAGCACCCACCTGGAATGTGGTTCCGTTGTCTCTTCTaGCAAATAGAGGTGGTGCTG +
Preference number: 5 (lower is better)
Translates to: LFLHYPHLQSCQHPPGMWFRCLF*QIEVVL
Trigger: CAGCACCACCTCTATTTGCAAGAAGAGACAACGGAA...CCACATTCCAGGTGGGTGCTGGCAGCTCTGAAGGTGAGGATAGTGAAGGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp TTAGGGAAGAGCAGAGAGGACATGGCCTGGTCAGGTAGGAGGAAGGGGATAGAGACCCTTGCACTTCCGTaGTCTCTTCTTGCAAATAGA +
Preference number: 5 (lower is better)
Translates to: LGKSREDMAWSGRRKGIETLALP*SLLANR
Trigger: TCTATTTGCAAGAAGAGACAACGGAAGTGCAAGGGT...CTCTATCCCCTTCCTCCTACCTGACCAGGCCATGTCCTCTCTGCTCTTCCCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR CAA 90 bp AAAGTGACCCTTGCACTTCCGTTGTCTCTTCTTGCAAATAGAGGTGGTGCTGCTAACCCTACTCTCTGCTaGCCTCTAGACTGGGATCCC +
Preference number: 5 (lower is better)
Translates to: KVTLALPLSLLANRGGAANPTLC*PLDWDP
Trigger: GGGATCCCAGTCTAGAGGCAAGCAGAGAGTAGGGTT...AGCAGCACCACCTCTATTTGCAAGAAGAGACAACGGAAGTGCAAGGGTCACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR CAA 90 bp CTTTTCCTTCACTATCCTCACCTTCAGAGCTGCCAGCACCCACCTGGAATGTGGGGACAAAATCACCTTTaGAGGAAGTGCCAGGTCAGT +
Preference number: 5 (lower is better)
Translates to: LFLHYPHLQSCQHPPGMWGQNHL*RKCQVS
Trigger: ACTGACCTGGCACTTCCTCAAAAGGTGATTTTGTCC...CCACATTCCAGGTGGGTGCTGGCAGCTCTGAAGGTGAGGATAGTGAAGGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp CTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCTTCAAATGGAATCCAGCCCAGGTAACCAAGAGCTaGGCCTGCCTGCAAGCTCTA +
Preference number: 5 (lower is better)
Translates to: LSSYPGPHLFMLFKWNPAQVTKS*ACLQAL
Trigger: TAGAGCTTGCAGGCAGGCCAAGCTCTTGGTTACCTG...GGCTGGATTCCATTTGAAGAGCATAAACAGATGTGGTCCAGGGTAGGAACTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp CTTGCACTTCCGTTGTCTCTTCTTGCAAATAGAGGTGGTGCTGCTAGGGAACTGATGTGGTTCCTTCACTaGGGCCATGAATGGCACAGG +
Preference number: 5 (lower is better)
Translates to: LALPLSLLANRGGAARELMWFLH*GHEWHR
Trigger: CCTGTGCCATTCATGGCCCAAGTGAAGGAACCACAT...CAGTTCCCTAGCAGCACCACCTCTATTTGCAAGAAGAGACAACGGAAGTGCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp ACAGCAAGGATATCCAGGGACTATCCATGTGGCCATAGGGAAGCAAGTGCTGTTCAAGCTTGGCTAGGCTaGTGGATCTCCATCACAGCA +
Preference number: 5 (lower is better)
Translates to: TARISRDYPCGHREASAVQAWLG*WISITA
Trigger: TGCTGTGATGGAGATCCACAAGCCTAGCCAAGCTTG...AACAGCACTTGCTTCCCTATGGCCACATGGATAGTCCCTGGATATCCTTGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp AATAAACCCTACTCTCTGCTTGCCTCTAGACTGGGATCCCCAGGGACAGGACACGACTTTTTGTCTAGCTaGACCACCGTGCCATCTAGA +
Preference number: 5 (lower is better)
Translates to: NKPYSLLASRLGSPGTGHDFLSS*TTVPSR
Trigger: TCTAGATGGCACGGTGGTCAAGCTAGACAAAAAGTC...GTGTCCTGTCCCTGGGGATCCCAGTCTAGAGGCAAGCAGAGAGTAGGGTTTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp GATGTAGCCTGCTCAACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGCTTGTCCTCTCTTGCTaGCCTGCCTTCAATGAGACG +
Preference number: 5 (lower is better)
Translates to: DVACSTALSSYPGPHLFMLVLSC*PAFNET
Trigger: CGTCTCATTGAAGGCAGGCAAGCAAGAGAGGACAAG...CATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGTTGAGCAGGCTACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp TATGCTCTTCAAATGGAATCCAGCCTTCAGATGAACCACTGCAATAAACCCTACCCCCTCCCTCCATGCTaGCCAAGAGACCCAGCAGGT +
Preference number: 5 (lower is better)
Translates to: YALQMESSLQMNHCNKPYPLPPC*PRDPAG
Trigger: ACCTGCTGGGTCTCTTGGCAAGCATGGAGGGAGGGG...GTAGGGTTTATTGCAGTGGTTCATCTGAAGGCTGGATTCCATTTGAAGAGCATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp CTTCAGATGAACCACTGCAATAAACCCTACTCTCTGCTTGCCTCTAGACTGGGAATGAGGAGCCAAAACTaGGTGACCAAGGGGCCTGTC +
Preference number: 5 (lower is better)
Translates to: LQMNHCNKPYSLLASRLGMRSQN*VTKGPV
Trigger: GACAGGCCCCTTGGTCACCAAGTTTTGGCTCCTCAT...TCCCAGTCTAGAGGCAAGCAGAGAGTAGGGTTTATTGCAGTGGTTCATCTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp TGTAGCCTGCTCAACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGCTTGTCCCTTTCTAGCTTaGTGGCAGCCAGTCCCAACT +
Preference number: 5 (lower is better)
Translates to: CSLLNSSEFLPWTTSVYACPFLA*WQPVPT
Trigger: AGTTGGGACTGGCTGCCACAAAGCTAGAAAGGGACA...AGCATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGTTGAGCAGGCTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp AATAAACCCTACTCTCTGCTTGCCTCTAGACTGGGATCCCCAGGGACAGGACACCTATGGGCCGGTACTTaGCAAAGCTGTTACATCTGT +
Preference number: 5 (lower is better)
Translates to: NKPYSLLASRLGSPGTGHLWAGT*QSCYIC
Trigger: ACAGATGTAACAGCTTTGCAAAGTACCGGCCCATAG...GTGTCCTGTCCCTGGGGATCCCAGTCTAGAGGCAAGCAGAGAGTAGGGTTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp CCTTGGGCCTTTCAAGATTATTACAGACAACTCCAAGTAGCTAGAGGCCTGGCCGCTGATCTCACCCATTaGATTCCTATGGGCCGGTAC +
Preference number: 5 (lower is better)
Translates to: PWAFQDYYRQLQVARGLAADLTH*IPMGRY
Trigger: GTACCGGCCCATAGGAATCAAATGGGTGAGATCAGC...GGCCAGGCCTCTAGCTACTTGGAGTTGTCTGTAATAATCTTGAAAGGCCCAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp GGGACTTCAGTCTGTACGTTTTGTACCAACTCACTGGATCTGGACAGTGGGCAGAAATTTAGCATCAACTaGGGGAGACGCCCAAGGGAC +
Preference number: 5 (lower is better)
Translates to: GTSVCTFCTNSLDLDSGQKFSIN*GRRPRD
Trigger: GTCCCTTGGGCGTCTCCCCAAGTTGATGCTAAATTT...CTGCCCACTGTCCAGATCCAGTGAGTTGGTACAAAACGTACAGACTGAAGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp CTTGCACTTCCGTTGTCTCTTCTTGCAAATAGAGGTGGTGCTGCTAGGGAACTGTGTGTGACTCCAGATTaGGATGGGCTGCAGGCTTTA +
Preference number: 5 (lower is better)
Translates to: LALPLSLLANRGGAARELCVTPD*DGLQAL
Trigger: TAAAGCCTGCAGCCCATCCAAATCTGGAGTCACACA...CAGTTCCCTAGCAGCACCACCTCTATTTGCAAGAAGAGACAACGGAAGTGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR CAA 90 bp ACAGCAAGGATATCCAGGGACTATCCATGTGGCCATAGGGAAGCAAGTGCTGTTTGTGTGACTCCAGATTaGGATGGGCTGCAGGCTTTA +
Preference number: 5 (lower is better)
Translates to: TARISRDYPCGHREASAVCVTPD*DGLQAL
Trigger: TAAAGCCTGCAGCCCATCCAAATCTGGAGTCACACA...AACAGCACTTGCTTCCCTATGGCCACATGGATAGTCCCTGGATATCCTTGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp CTTTTCCTTCACTATCCTCACCTTCAGAGCTGCCAGCACCCACCTGGAATGTGGACCCTTGCACTTCCGTaGTCTCTTCTTGCAAATAGA +
Preference number: 5 (lower is better)
Translates to: LFLHYPHLQSCQHPPGMWTLALP*SLLANR
Trigger: TCTATTTGCAAGAAGAGACAACGGAAGTGCAAGGGT...CCACATTCCAGGTGGGTGCTGGCAGCTCTGAAGGTGAGGATAGTGAAGGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp CGTGCTGTCCTTGAACATGTCTTCGGTCCTGGGCATTGTGACCCCAAAGTGTTTGGACAAAATCACCTTTaGAGGAAGTGCCAGGTCAGT +
Preference number: 5 (lower is better)
Translates to: RAVLEHVFGPGHCDPKVFGQNHL*RKCQVS
Trigger: ACTGACCTGGCACTTCCTCAAAAGGTGATTTTGTCC...AAACACTTTGGGGTCACAATGCCCAGGACCGAAGACATGTTCAAGGACAGCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp CTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCTTCAAATGGAATCCAGCCCTTGTCCTCTCTTGCTaGCCTGCCTTCAATGAGACG +
Preference number: 5 (lower is better)
Translates to: LSSYPGPHLFMLFKWNPALVLSC*PAFNET
Trigger: CGTCTCATTGAAGGCAGGCAAGCAAGAGAGGACAAG...GGCTGGATTCCATTTGAAGAGCATAAACAGATGTGGTCCAGGGTAGGAACTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp AAAGTGACCCTTGCACTTCCGTTGTCTCTTCTTGCAAATAGAGGTGGTGCTGCTTGTCCCTTTCTAGCTTaGTGGCAGCCAGTCCCAACT +
Preference number: 5 (lower is better)
Translates to: KVTLALPLSLLANRGGAACPFLA*WQPVPT
Trigger: AGTTGGGACTGGCTGCCACAAAGCTAGAAAGGGACA...AGCAGCACCACCTCTATTTGCAAGAAGAGACAACGGAAGTGCAAGGGTCACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp CTTTTCCTTCACTATCCTCACCTTCAGAGCTGCCAGCACCCACCTGGAATGTGGGAAGCAAGTGCTGTTTaGTCCCTTTCTAGCTTTGTG +
Preference number: 5 (lower is better)
Translates to: LFLHYPHLQSCQHPPGMWEASAV*SLSSFV
Trigger: CACAAAGCTAGAAAGGGACAAAACAGCACTTGCTTC...CCACATTCCAGGTGGGTGCTGGCAGCTCTGAAGGTGAGGATAGTGAAGGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS CCA 90 bp ACAAGTAGCTTATCTCAGCTTGAAAACCATCTCTTTGCCCTCTGGTaGCAAGAGCATGTGTGTGTGTGTGTGTGTGTGTGTCCCAAGGTG +
Preference number: 5 (lower is better)
Translates to: TSSLSQLENHLFALW*QEHVCVCVCVCPKV
Trigger: CACCTTGGGACACACACACACACACACACACACATGCTCTTGCCACCAGAGGGCAAAGAGATGGTTTTCAAGCTGAGATAAGCTACTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432223.2
CDS-3UTR CAA 90 bp ACAGCAAGGATATCCAGGGACTATCCATGTGGCCATAGGGAAGCAAGTGCTGTTTGTAAACAGGGTTCATaGTGGAAGACTGAGGATCCG +
Preference number: 5 (lower is better)
Translates to: TARISRDYPCGHREASAVCKQGS*WKTEDP
Trigger: CGGATCCTCAGTCTTCCACAATGAACCCTGTTTACA...AACAGCACTTGCTTCCCTATGGCCACATGGATAGTCCCTGGATATCCTTGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp ACCAGCATGCTGCTCACTGTGGGCCTGTTCCCTTCCATAACCTGTTTCCTCATTGTTTCATCAGCAGAGTaGCATAAGCTGAATGCAGGA +
Preference number: 5 (lower is better)
Translates to: TSMLLTVGLFPSITCFLIVSSAE*HKLNAG
Trigger: TCCTGCATTCAGCTTATGCAACTCTGCTGATGAAAC...AATGAGGAAACAGGTTATGGAAGGGAACAGGCCCACAGTGAGCAGCATGCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000064778.8
CDS-3UTR CAA 90 bp CTGCTCAACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCTTCAATGTGTGACTCCAGATTaGGATGGGCTGCAGGCTTTA +
Preference number: 5 (lower is better)
Translates to: LLNSSEFLPWTTSVYALQCVTPD*DGLQAL
Trigger: TAAAGCCTGCAGCCCATCCAAATCTGGAGTCACACA...TTGAAGAGCATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGTTGAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR CAA 90 bp CCATTATGTTTCAGGCTTTCACTATTTGCAGGCAATCCAGCTCCCAGACTCAAAAACCCTACTCTCTGCTaGCCTCTAGACTGGGATCCC +
Preference number: 5 (lower is better)
Translates to: PLCFRLSLFAGNPAPRLKNPTLC*PLDWDP
Trigger: GGGATCCCAGTCTAGAGGCAAGCAGAGAGTAGGGTT...TTTGAGTCTGGGAGCTGGATTGCCTGCAAATAGTGAAAGCCTGAAACATAATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp ACCAGCATGCTGCTCACTGTGGGCCTGTTCCCTTCCATAACCTGTTTCCTCATTCAGGTGGTTTTGTTCTaGGTCTGTTGCAATGGTTCT +
Preference number: 5 (lower is better)
Translates to: TSMLLTVGLFPSITCFLIQVVLF*VCCNGS
Trigger: AGAACCATTGCAACAGACCAAGAACAAAACCACCTG...AATGAGGAAACAGGTTATGGAAGGGAACAGGCCCACAGTGAGCAGCATGCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp CCTTGGGCCTTTCAAGATTATTACAGACAACTCCAAGTAGCTAGAGGCCTGGCCGACTTTTTGTCTAGCTaGACCACCGTGCCATCTAGA +
Preference number: 5 (lower is better)
Translates to: PWAFQDYYRQLQVARGLADFLSS*TTVPSR
Trigger: TCTAGATGGCACGGTGGTCAAGCTAGACAAAAAGTC...GGCCAGGCCTCTAGCTACTTGGAGTTGTCTGTAATAATCTTGAAAGGCCCAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp ACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCTTCAAATGGAATCGGGGTACCTCAAACTaGGAACAATTCGGGTGGCCA +
Preference number: 5 (lower is better)
Translates to: TALSSYPGPHLFMLFKWNRGTSN*EQFGWP
Trigger: TGGCCACCCGAATTGTTCCAAGTTTGAGGTACCCCG...ATTCCATTTGAAGAGCATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp GTGGGAGAATACAGGATGGAAAAGCAGACTTCCACGTATTTTCACTTAACTGCACGGTTGGCCTTTGGGTaGGACTCAACAGCATGCACC +
Preference number: 5 (lower is better)
Translates to: VGEYRMEKQTSTYFHLTARLAFG*DSTACT
Trigger: GGTGCATGCTGTTGAGTCCAACCCAAAGGCCAACCG...TGCAGTTAAGTGAAAATACGTGGAAGTCTGCTTTTCCATCCTGTATTCTCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp TGTTTCCTCATTTGTCAATTGACTGTAATAACTCTAACCCTGTCCCTCTCAGGGTCCTGTGTGCCTCGGTaGGCCTTTGGGTTGGACTCA +
Preference number: 5 (lower is better)
Translates to: CFLICQLTVITLTLSLSGSCVPR*AFGLDS
Trigger: TGAGTCCAACCCAAAGGCCAACCGAGGCACACAGGA...CCCTGAGAGGGACAGGGTTAGAGTTATTACAGTCAATTGACAAATGAGGAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp ACCAGCATGCTGCTCACTGTGGGCCTGTTCCCTTCCATAACCTGTTTCCTCATTGAAGCAAGTGCTGTTTaGTCCCTTTCTAGCTTTGTG +
Preference number: 5 (lower is better)
Translates to: TSMLLTVGLFPSITCFLIEASAV*SLSSFV
Trigger: CACAAAGCTAGAAAGGGACAAAACAGCACTTGCTTC...AATGAGGAAACAGGTTATGGAAGGGAACAGGCCCACAGTGAGCAGCATGCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp TGGGCCTTTCAAGATTATTACAGACAACTCCAAGTAGCTAGAGGCCTGGCCTTAGCTGATCTCACCCATTaGATTCCTATGGGCCGGTAC +
Preference number: 5 (lower is better)
Translates to: WAFQDYYRQLQVARGLALADLTH*IPMGRY
Trigger: GTACCGGCCCATAGGAATCAAATGGGTGAGATCAGC...TAAGGCCAGGCCTCTAGCTACTTGGAGTTGTCTGTAATAATCTTGAAAGGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp CTTCAGATGAACCACTGCAATAAACCCTACTCTCTGCTTGCCTCTAGACTGGGAGATGGGGACAGGCCCTaGGGCCTTTCAAGATTATTA +
Preference number: 5 (lower is better)
Translates to: LQMNHCNKPYSLLASRLGDGDRP*GLSRLL
Trigger: TAATAATCTTGAAAGGCCCAAGGGCCTGTCCCCATC...TCCCAGTCTAGAGGCAAGCAGAGAGTAGGGTTTATTGCAGTGGTTCATCTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp CTGCTCAACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCTTCAAAAATTTAGCATCAACTaGGGGAGACGCCCAAGGGAC +
Preference number: 5 (lower is better)
Translates to: LLNSSEFLPWTTSVYALQKFSIN*GRRPRD
Trigger: GTCCCTTGGGCGTCTCCCCAAGTTGATGCTAAATTT...TTGAAGAGCATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGTTGAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS CCA 90 bp GCAGCCTCAGGGAAAACTGAGCAAAGAATGAATTTGGACATTGCTTaGGAGAGCAGAAAAGGTTCTATGAGGAGGATGCAGGTCTCAGAC +
Preference number: 5 (lower is better)
Translates to: AASGKTEQRMNLDIA*ESRKGSMRRMQVSD
Trigger: GTCTGAGACCTGCATCCTCCTCATAGAACCTTTTCTGCTCTCCCAAGCAATGTCCAAATTCATTCTTTGCTCAGTTTTCCCTGAGGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432223.2
CDS-3UTR CAA 90 bp GTGGGAGAATACAGGATGGAAAAGCAGACTTCCACGTATTTTCACTTAACTGCAAGCCGCAGAGGATGCTaGGTAAGTTCGGTTCTCGGT +
Preference number: 5 (lower is better)
Translates to: VGEYRMEKQTSTYFHLTASRRGC*VSSVLG
Trigger: ACCGAGAACCGAACTTACCAAGCATCCTCTGCGGCT...TGCAGTTAAGTGAAAATACGTGGAAGTCTGCTTTTCCATCCTGTATTCTCCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp ACAGCAAGGATATCCAGGGACTATCCATGTGGCCATAGGGAAGCAAGTGCTGTTCAGGAGACATTTCATTaGTGTCTGGGACATGGGAAT +
Preference number: 5 (lower is better)
Translates to: TARISRDYPCGHREASAVQETFH*CLGHGN
Trigger: ATTCCCATGTCCCAGACACAAATGAAATGTCTCCTG...AACAGCACTTGCTTCCCTATGGCCACATGGATAGTCCCTGGATATCCTTGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp TGTAGCCTGCTCAACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGCTTTTGTTCTTGGTCTGTaGCAATGGTTCTCAGGAGAC +
Preference number: 5 (lower is better)
Translates to: CSLLNSSEFLPWTTSVYAFVLGL*QWFSGD
Trigger: GTCTCCTGAGAACCATTGCAACAGACCAAGAACAAA...AGCATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGTTGAGCAGGCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR CAA 90 bp GATGTAGCCTGCTCAACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGCAGGTGGTTTTGTTCTaGGTCTGTTGCAATGGTTCT +
Preference number: 5 (lower is better)
Translates to: DVACSTALSSYPGPHLFMQVVLF*VCCNGS
Trigger: AGAACCATTGCAACAGACCAAGAACAAAACCACCTG...CATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGTTGAGCAGGCTACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR CAA 90 bp GTGGGAGAATACAGGATGGAAAAGCAGACTTCCACGTATTTTCACTTAACTGCACCAGGGCCAGATGCTTaGGCCAGAGACCTTTCAAAC +
Preference number: 5 (lower is better)
Translates to: VGEYRMEKQTSTYFHLTAPGPDA*ARDLSN
Trigger: GTTTGAAAGGTCTCTGGCCAAAGCATCTGGCCCTGG...TGCAGTTAAGTGAAAATACGTGGAAGTCTGCTTTTCCATCCTGTATTCTCCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp ACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCTTCAAATGGAATATGTGGTTCCTTCACTaGGGCCATGAATGGCACAGG +
Preference number: 5 (lower is better)
Translates to: TALSSYPGPHLFMLFKWNMWFLH*GHEWHR
Trigger: CCTGTGCCATTCATGGCCCAAGTGAAGGAACCACAT...ATTCCATTTGAAGAGCATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp TATGCTCTTCAAATGGAATCCAGCCTTCAGATGAACCACTGCAATAAACCCTACAGTGACTCCCCAAGCTaGGCTAGGCTTGTGGATCTC +
Preference number: 5 (lower is better)
Translates to: YALQMESSLQMNHCNKPYSDSPS*ARLVDL
Trigger: GAGATCCACAAGCCTAGCCAAGCTTGGGGAGTCACT...GTAGGGTTTATTGCAGTGGTTCATCTGAAGGCTGGATTCCATTTGAAGAGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp GTGGGAGAATACAGGATGGAAAAGCAGACTTCCACGTATTTTCACTTAACTGCAAGTGACTCCCCAAGCTaGGCTAGGCTTGTGGATCTC +
Preference number: 5 (lower is better)
Translates to: VGEYRMEKQTSTYFHLTASDSPS*ARLVDL
Trigger: GAGATCCACAAGCCTAGCCAAGCTTGGGGAGTCACT...TGCAGTTAAGTGAAAATACGTGGAAGTCTGCTTTTCCATCCTGTATTCTCCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp GATGTAGCCTGCTCAACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGAAGAATTCAAAAGGGTaGGCTGGTAACGAGCCATCT +
Preference number: 5 (lower is better)
Translates to: DVACSTALSSYPGPHLFMKNSKG*AGNEPS
Trigger: AGATGGCTCGTTACCAGCCAACCCTTTTGAATTCTT...CATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGTTGAGCAGGCTACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp ACAGCAAGGATATCCAGGGACTATCCATGTGGCCATAGGGAAGCAAGTGCTGTTAAATTCTCATCCTCCTaGTGCTGCCAGTTAGATGTG +
Preference number: 5 (lower is better)
Translates to: TARISRDYPCGHREASAVKFSSS*CCQLDV
Trigger: CACATCTAACTGGCAGCACAAGGAGGATGAGAATTT...AACAGCACTTGCTTCCCTATGGCCACATGGATAGTCCCTGGATATCCTTGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp CTTCAGATGAACCACTGCAATAAACCCTACTCTCTGCTTGCCTCTAGACTGGGACTATGGGCCGGTACTTaGCAAAGCTGTTACATCTGT +
Preference number: 5 (lower is better)
Translates to: LQMNHCNKPYSLLASRLGLWAGT*QSCYIC
Trigger: ACAGATGTAACAGCTTTGCAAAGTACCGGCCCATAG...TCCCAGTCTAGAGGCAAGCAGAGAGTAGGGTTTATTGCAGTGGTTCATCTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS CCA 90 bp AAAACAAGTAGCTTATCTCAGCTTGAAAACCATCTCTTTGCCCTCTaGTGGCAAGAGCATGTGTGTGTGTGTGTGTGTGTGTGTCCCAAG +
Preference number: 5 (lower is better)
Translates to: KTSSLSQLENHLFAL*WQEHVCVCVCVCPK
Trigger: CTTGGGACACACACACACACACACACACACATGCTCTTGCCACCAGAGGGCAAAGAGATGGTTTTCAAGCTGAGATAAGCTACTTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432223.2
CDS-3UTR CAA 90 bp CTTGCACTTCCGTTGTCTCTTCTTGCAAATAGAGGTGGTGCTGCTAGGGAACTGCATACTCAGGTGGTTTaGTTCTTGGTCTGTTGCAAT +
Preference number: 5 (lower is better)
Translates to: LALPLSLLANRGGAARELHTQVV*FLVCCN
Trigger: ATTGCAACAGACCAAGAACAAAACCACCTGAGTATG...CAGTTCCCTAGCAGCACCACCTCTATTTGCAAGAAGAGACAACGGAAGTGCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR CAA 90 bp CTTGCACTTCCGTTGTCTCTTCTTGCAAATAGAGGTGGTGCTGCTAGGGAACTGTGCCATCTAGAATCTTaGGAGGTATCTACCTATGGT +
Preference number: 5 (lower is better)
Translates to: LALPLSLLANRGGAARELCHLES*EVSTYG
Trigger: ACCATAGGTAGATACCTCCAAAGATTCTAGATGGCA...CAGTTCCCTAGCAGCACCACCTCTATTTGCAAGAAGAGACAACGGAAGTGCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp CTGCTCAACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCTTCAAAAATTCTCATCCTCCTaGTGCTGCCAGTTAGATGTG +
Preference number: 5 (lower is better)
Translates to: LLNSSEFLPWTTSVYALQKFSSS*CCQLDV
Trigger: CACATCTAACTGGCAGCACAAGGAGGATGAGAATTT...TTGAAGAGCATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGTTGAGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp ACAGCAAGGATATCCAGGGACTATCCATGTGGCCATAGGGAAGCAAGTGCTGTTTTCAGTCTGTACGTTTaGTACCAACTCACTGGATCT +
Preference number: 5 (lower is better)
Translates to: TARISRDYPCGHREASAVFSLYV*YQLTGS
Trigger: AGATCCAGTGAGTTGGTACAAAACGTACAGACTGAA...AACAGCACTTGCTTCCCTATGGCCACATGGATAGTCCCTGGATATCCTTGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp ACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCTTCAAATGGAATTTCCGTTGTCTCTTCTaGCAAATAGAGGTGGTGCTG +
Preference number: 5 (lower is better)
Translates to: TALSSYPGPHLFMLFKWNFRCLF*QIEVVL
Trigger: CAGCACCACCTCTATTTGCAAGAAGAGACAACGGAA...ATTCCATTTGAAGAGCATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR CAA 90 bp CGTGCTGTCCTTGAACATGTCTTCGGTCCTGGGCATTGTGACCCCAAAGTGTTTTTATTAGCAAGTCACTaGACTTTTCCAAGCCTTGAT +
Preference number: 5 (lower is better)
Translates to: RAVLEHVFGPGHCDPKVFLLASH*TFPSLD
Trigger: ATCAAGGCTTGGAAAAGTCAAGTGACTTGCTAATAA...AAACACTTTGGGGTCACAATGCCCAGGACCGAAGACATGTTCAAGGACAGCACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp TCAGGAGACATTTCATTTGTGTCTGGGACATGGGAATGTCCTGAACTAATCTTGTCCAGCTCTGACTTTTaGTCTAGCTTGACCACCGTG +
Preference number: 5 (lower is better)
Translates to: SGDISFVSGTWECPELILSSSDF*SSLTTV
Trigger: CACGGTGGTCAAGCTAGACAAAAAGTCAGAGCTGGA...CAAGATTAGTTCAGGACATTCCCATGTCCCAGACACAAATGAAATGTCTCCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp TCAGGAGACATTTCATTTGTGTCTGGGACATGGGAATGTCCTGAACTAATCTTGTCAGGCTTTCACTATTaGCAGGCAATCCAGCTCCCA +
Preference number: 5 (lower is better)
Translates to: SGDISFVSGTWECPELILSGFHY*QAIQLP
Trigger: TGGGAGCTGGATTGCCTGCAAATAGTGAAAGCCTGA...CAAGATTAGTTCAGGACATTCCCATGTCCCAGACACAAATGAAATGTCTCCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp GATGTAGCCTGCTCAACAGCTCTGAGTTCCTACCCTGGACCACATCTGTTTATGTACATTTTAGGGTCATaGCCAGGTAAGAAAGAACAG +
Preference number: 5 (lower is better)
Translates to: DVACSTALSSYPGPHLFMYILGS*PGKKEQ
Trigger: CTGTTCTTTCTTACCTGGCAATGACCCTAAAATGTA...CATAAACAGATGTGGTCCAGGGTAGGAACTCAGAGCTGTTGAGCAGGCTACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp TCTGTTTATGCTCTTCAAATGGAATCCAGCCTTCAGATGAACCACTGCAATAAATGCCTCGGTTGGCCTTaGGGTTGGACTCAACAGCAT +
Preference number: 5 (lower is better)
Translates to: SVYALQMESSLQMNHCNKCLGWP*GWTQQH
Trigger: ATGCTGTTGAGTCCAACCCAAAGGCCAACCGAGGCA...TTTATTGCAGTGGTTCATCTGAAGGCTGGATTCCATTTGAAGAGCATAAACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp TCAGGAGACATTTCATTTGTGTCTGGGACATGGGAATGTCCTGAACTAATCTTGGATGGGGACAGGCCCTaGGGCCTTTCAAGATTATTA +
Preference number: 5 (lower is better)
Translates to: SGDISFVSGTWECPELILDGDRP*GLSRLL
Trigger: TAATAATCTTGAAAGGCCCAAGGGCCTGTCCCCATC...CAAGATTAGTTCAGGACATTCCCATGTCCCAGACACAAATGAAATGTCTCCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp TATGCTCTTCAAATGGAATCCAGCCTTCAGATGAACCACTGCAATAAACCCTACTTCCGTTGTCTCTTCTaGCAAATAGAGGTGGTGCTG +
Preference number: 5 (lower is better)
Translates to: YALQMESSLQMNHCNKPYFRCLF*QIEVVL
Trigger: CAGCACCACCTCTATTTGCAAGAAGAGACAACGGAA...GTAGGGTTTATTGCAGTGGTTCATCTGAAGGCTGGATTCCATTTGAAGAGCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR CAA 90 bp TGTTTCCTCATTTGTCAATTGACTGTAATAACTCTAACCCTGTCCCTCTCAGGGCAGGAGACATTTCATTaGTGTCTGGGACATGGGAAT +
Preference number: 5 (lower is better)
Translates to: CFLICQLTVITLTLSLSGQETFH*CLGHGN
Trigger: ATTCCCATGTCCCAGACACAAATGAAATGTCTCCTG...CCCTGAGAGGGACAGGGTTAGAGTTATTACAGTCAATTGACAAATGAGGAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp TATGCTCTTCAAATGGAATCCAGCCTTCAGATGAACCACTGCAATAAACCCTACCAGGAGACATTTCATTaGTGTCTGGGACATGGGAAT +
Preference number: 5 (lower is better)
Translates to: YALQMESSLQMNHCNKPYQETFH*CLGHGN
Trigger: ATTCCCATGTCCCAGACACAAATGAAATGTCTCCTG...GTAGGGTTTATTGCAGTGGTTCATCTGAAGGCTGGATTCCATTTGAAGAGCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR CAA 90 bp TGTTTCCTCATTTGTCAATTGACTGTAATAACTCTAACCCTGTCCCTCTCAGGGTTTGTTCTTGGTCTGTaGCAATGGTTCTCAGGAGAC +
Preference number: 5 (lower is better)
Translates to: CFLICQLTVITLTLSLSGFVLGL*QWFSGD
Trigger: GTCTCCTGAGAACCATTGCAACAGACCAAGAACAAA...CCCTGAGAGGGACAGGGTTAGAGTTATTACAGTCAATTGACAAATGAGGAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp TATGCTCTTCAAATGGAATCCAGCCTTCAGATGAACCACTGCAATAAACCCTACTTTGTTCTTGGTCTGTaGCAATGGTTCTCAGGAGAC +
Preference number: 5 (lower is better)
Translates to: YALQMESSLQMNHCNKPYFVLGL*QWFSGD
Trigger: GTCTCCTGAGAACCATTGCAACAGACCAAGAACAAA...GTAGGGTTTATTGCAGTGGTTCATCTGAAGGCTGGATTCCATTTGAAGAGCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR CAA 90 bp TCAGGAGACATTTCATTTGTGTCTGGGACATGGGAATGTCCTGAACTAATCTTGCAGGTGGTTTTGTTCTaGGTCTGTTGCAATGGTTCT +
Preference number: 5 (lower is better)
Translates to: SGDISFVSGTWECPELILQVVLF*VCCNGS
Trigger: AGAACCATTGCAACAGACCAAGAACAAAACCACCTG...CAAGATTAGTTCAGGACATTCCCATGTCCCAGACACAAATGAAATGTCTCCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR CAA 90 bp CTGAGTTCCTACCCTGGACCACATCTGTTTATGCTCTTCAAATGGAATCCAGCCATAAAATGGAGGACTTaGGCAACCAATGTCAAAGTA +
Preference number: 5 (lower is better)
Translates to: LSSYPGPHLFMLFKWNPAIKWRT*ATNVKV
Trigger: TACTTTGACATTGGTTGCCAAAGTCCTCCATTTTAT...GGCTGGATTCCATTTGAAGAGCATAAACAGATGTGGTCCAGGGTAGGAACTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp AAAGTGACCCTTGCACTTCCGTTGTCTCTTCTTGCAAATAGAGGTGGTGCTGCTATAAAATGGAGGACTTaGGCAACCAATGTCAAAGTA +
Preference number: 5 (lower is better)
Translates to: KVTLALPLSLLANRGGAAIKWRT*ATNVKV
Trigger: TACTTTGACATTGGTTGCCAAAGTCCTCCATTTTAT...AGCAGCACCACCTCTATTTGCAAGAAGAGACAACGGAAGTGCAAGGGTCACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp TCAGGAGACATTTCATTTGTGTCTGGGACATGGGAATGTCCTGAACTAATCTTGCATACTCAGGTGGTTTaGTTCTTGGTCTGTTGCAAT +
Preference number: 5 (lower is better)
Translates to: SGDISFVSGTWECPELILHTQVV*FLVCCN
Trigger: ATTGCAACAGACCAAGAACAAAACCACCTGAGTATG...CAAGATTAGTTCAGGACATTCCCATGTCCCAGACACAAATGAAATGTCTCCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR CAA 90 bp TCAGGAGACATTTCATTTGTGTCTGGGACATGGGAATGTCCTGAACTAATCTTGTGCCATCTAGAATCTTaGGAGGTATCTACCTATGGT +
Preference number: 5 (lower is better)
Translates to: SGDISFVSGTWECPELILCHLES*EVSTYG
Trigger: ACCATAGGTAGATACCTCCAAAGATTCTAGATGGCA...CAAGATTAGTTCAGGACATTCCCATGTCCCAGACACAAATGAAATGTCTCCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp GTGGGAGAATACAGGATGGAAAAGCAGACTTCCACGTATTTTCACTTAACTGCAGAAAGAGCAGAGGATTaGAAGAATCACTTCCAAGCT +
Preference number: 5 (lower is better)
Translates to: VGEYRMEKQTSTYFHLTAERAED*KNHFQA
Trigger: AGCTTGGAAGTGATTCTTCAAATCCTCTGCTCTTTC...TGCAGTTAAGTGAAAATACGTGGAAGTCTGCTTTTCCATCCTGTATTCTCCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp TATGCTCTTCAAATGGAATCCAGCCTTCAGATGAACCACTGCAATAAACCCTACTTCAGTCTGTACGTTTaGTACCAACTCACTGGATCT +
Preference number: 5 (lower is better)
Translates to: YALQMESSLQMNHCNKPYFSLYV*YQLTGS
Trigger: AGATCCAGTGAGTTGGTACAAAACGTACAGACTGAA...GTAGGGTTTATTGCAGTGGTTCATCTGAAGGCTGGATTCCATTTGAAGAGCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp TCTGTTTATGCTCTTCAAATGGAATCCAGCCTTCAGATGAACCACTGCAATAAAACCCTTGCACTTCCGTaGTCTCTTCTTGCAAATAGA +
Preference number: 5 (lower is better)
Translates to: SVYALQMESSLQMNHCNKTLALP*SLLANR
Trigger: TCTATTTGCAAGAAGAGACAACGGAAGTGCAAGGGT...TTTATTGCAGTGGTTCATCTGAAGGCTGGATTCCATTTGAAGAGCATAAACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS-3UTR CAA 90 bp TATGCTCTTCAAATGGAATCCAGCCTTCAGATGAACCACTGCAATAAACCCTACTACATTTTAGGGTCATaGCCAGGTAAGAAAGAACAG +
Preference number: 5 (lower is better)
Translates to: YALQMESSLQMNHCNKPYYILGS*PGKKEQ
Trigger: CTGTTCTTTCTTACCTGGCAATGACCCTAAAATGTA...GTAGGGTTTATTGCAGTGGTTCATCTGAAGGCTGGATTCCATTTGAAGAGCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp TCAGGAGACATTTCATTTGTGTCTGGGACATGGGAATGTCCTGAACTAATCTTGTTATTAGCAAGTCACTaGACTTTTCCAAGCCTTGAT +
Preference number: 5 (lower is better)
Translates to: SGDISFVSGTWECPELILLLASH*TFPSLD
Trigger: ATCAAGGCTTGGAAAAGTCAAGTGACTTGCTAATAA...CAAGATTAGTTCAGGACATTCCCATGTCCCAGACACAAATGAAATGTCTCCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS-3UTR CAA 90 bp TGTTTCCTCATTTGTCAATTGACTGTAATAACTCTAACCCTGTCCCTCTCAGGGACTCCGGACTGTGTTTaGAAAACACCTATAAATTCT +
Preference number: 5 (lower is better)
Translates to: CFLICQLTVITLTLSLSGTPDCV*KTPINS
Trigger: AGAATTTATAGGTGTTTTCAAAACACAGTCCGGAGT...CCCTGAGAGGGACAGGGTTAGAGTTATTACAGTCAATTGACAAATGAGGAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS CCA 72 bp CTACGGCGGCGACGCTCTCGCCCGTGTCCAGTAGGGTaGCGGATGGCGCGCGGGGACCGGAGCCTCCTCCTC +
Preference number: 6 (lower is better)
Translates to: LRRRRSRPCPVG*RMARGDRSLLL
Trigger: GAGGAGGAGGCTCCGGTCCCCGCGCGCCATCCGCCACCCTACTGGACACGGGCGAGAGCGTCGCCGCCGTAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
ENST00000632101.1
CDS CAA 90 bp CTGCAGGCGAAAACGGCGGCGGCGGCGGCTGAGGCGGCGATGCCCTaGTCTTCTCCGGAGGCTACGGCGGCGACGCTCTCGCCCGTGTCC +
Preference number: 6 (lower is better)
Translates to: LQAKTAAAAAEAAMP*SSPEATAATLSPVS
Trigger: GGACACGGGCGAGAGCGTCGCCGCCGTAGCCTCCGGAGAAGACAAGGGCATCGCCGCCTCAGCCGCCGCCGCCGCCGTTTTCGCCTGCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
ENST00000632101.1
CDS CAA 72 bp AAAACGGCGGCGGCGGCGGCTGAGGCGGCGATGCCCTaGTCTTCTCCGGAGGCTACGGCGGCGACGCTCTCG +
Preference number: 6 (lower is better)
Translates to: KTAAAAAEAAMP*SSPEATAATLS
Trigger: CGAGAGCGTCGCCGCCGTAGCCTCCGGAGAAGACAAGGGCATCGCCGCCTCAGCCGCCGCCGCCGCCGTTTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
ENST00000632101.1
CDS TCA 72 bp GCGGGGACCGGAGCCTCCTCCTCAGCGACTCGGCTCTaGATCCTCTGCAGTAGCCGCCGAGGAGCCCGACGG +
Preference number: 6 (lower is better)
Translates to: AGTGASSSATRL*ILCSSRRGARR
Trigger: CCGTCGGGCTCCTCGGCGGCTACTGCAGAGGATTCAGAGCCGAGTCGCTGAGGAGGAGGCTCCGGTCCCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000064778.8
CDS CCA 72 bp GGCCACACCGTTGGTCCTCGGGGCGGCAACAGGTGCTaGGTAGATAGCAGAGGGAATGCTGTTGGGCTGGAC +
Preference number: 6 (lower is better)
Translates to: GHTVGPRGGNRC*VDSRGNAVGLD
Trigger: GTCCAGCCCAACAGCATTCCCTCTGCTATCTACCCAGCACCTGTTGCCGCCCCGAGGACCAACGGTGTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS GCA 72 bp GGTTCTCGGTCCCGGTGTCCACTGGGAGGTGGAAGGTaGCTTCAGTGCCACAGGAAGACGAGTTCTGTGGCC +
Preference number: 6 (lower is better)
Translates to: GSRSRCPLGGGR*LQCHRKTSSVA
Trigger: GGCCACAGAACTCGTCTTCCTGTGGCACTGAAGGCACCTTCCACCTCCCAGTGGACACCGGGACCGAGAACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
ENST00000632101.1
CDS GCA 72 bp CATGGCCACACCGTTGGTCCTCGGGGCGGCAACAGGTaGTGGGTAGATAGCAGAGGGAATGCTGTTGGGCTG +
Preference number: 6 (lower is better)
Translates to: HGHTVGPRGGNR*WVDSRGNAVGL
Trigger: CAGCCCAACAGCATTCCCTCTGCTATCTACCCAGCACCTGTTGCCGCCCCGAGGACCAACGGTGTGGCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS CCA 72 bp GGCATGGAGACAGGGTGTGCCCCAATCGCCGTGTGCTaGGGTGTAGTCAGCAGGGTACCTGCTGACATTGCC +
Preference number: 6 (lower is better)
Translates to: GMETGCAPIAVC*GVVSRVPADIA
Trigger: GGCAATGTCAGCAGGTACCCTGCTGACTACACCCCAGCACACGGCGATTGGGGCACACCCTGTCTCCATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS CCA 72 bp GGCATGGAGACAGGGTGTGCCCCAATCGCCGTGTGCTaGGGTGTAGTCAGCAGGGTACTGAAAGCCGCAGAG +
Preference number: 6 (lower is better)
Translates to: GMETGCAPIAVC*GVVSRVLKAAE
Trigger: CTCTGCGGCTTTCAGTACCCTGCTGACTACACCCCAGCACACGGCGATTGGGGCACACCCTGTCTCCATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450446.6
CDS GCA 72 bp GTTGGCATGGAGACAGGGTGTGCCCCAATCGCCGTGTaGTGGGGTGTAGTCAGCAGGGTACTGAAAGCCGCA +
Preference number: 6 (lower is better)
Translates to: VGMETGCAPIAV*WGVVSRVLKAA
Trigger: TGCGGCTTTCAGTACCCTGCTGACTACACCCCAGCACACGGCGATTGGGGCACACCCTGTCTCCATGCCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450446.6
CDS CCA 72 bp CCCCAGGCTGCACGGGGCTGTAAACAGGGTTCATTGTaGAAGACTGAGGATCCGGTGAGCAGCTGCAGGCGA +
Preference number: 6 (lower is better)
Translates to: PQAARGCKQGSL*KTEDPVSSCRR
Trigger: TCGCCTGCAGCTGCTCACCGGATCCTCAGTCTTCCACAATGAACCCTGTTTACAGCCCCGTGCAGCCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS CAA 72 bp GAGCCCCAGGCTGCACGGGGCTGTAAACAGGGTTCATaGTGGAAGACTGAGGATCCGGTGAGCAGCTGCAGG +
Preference number: 6 (lower is better)
Translates to: EPQAARGCKQGS*WKTEDPVSSCR
Trigger: CCTGCAGCTGCTCACCGGATCCTCAGTCTTCCACAATGAACCCTGTTTACAGCCCCGTGCAGCCTGGGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS CAA 72 bp CCAGTGTGGGGGCACGTAGCTGTACGCAGGGGTTCCTaGGGCCCTATATGTTGGCATGGAGACAGGGTGTGC +
Preference number: 6 (lower is better)
Translates to: PVWGHVAVRRGS*GPICWHGDRVC
Trigger: GCACACCCTGTCTCCATGCCAACATATAGGGCCCAAGGAACCCCTGCGTACAGCTACGTGCCCCCACACTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS GCA 72 bp TCCTTGGGCCCTATATGTTGGCATGGAGACAGGGTGTaGCCCAATCGCCGTGTGCTGGGGTGTAGTCAGCAG +
Preference number: 6 (lower is better)
Translates to: SLGPICWHGDRV*PNRRVLGCSQQ
Trigger: CTGCTGACTACACCCCAGCACACGGCGATTGGGGCACACCCTGTCTCCATGCCAACATATAGGGCCCAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS CCA 72 bp ACTCCAGATTTGGATGGGCTGCAGGCTTTACCAGTGTaGGGGCACGTAGCTGTACGCAGGGGTTCCTTGGGC +
Preference number: 6 (lower is better)
Translates to: TPDLDGLQALPV*GHVAVRRGSLG
Trigger: GCCCAAGGAACCCCTGCGTACAGCTACGTGCCCCCACACTGGTAAAGCCTGCAGCCCATCCAAATCTGGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS CAA 72 bp CGTAGCTGTACGCAGGGGTTCCTTGGGCCCTATATGTaGGCATGGAGACAGGGTGTGCCCCAATCGCCGTGT +
Preference number: 6 (lower is better)
Translates to: RSCTQGFLGPYM*AWRQGVPQSPC
Trigger: ACACGGCGATTGGGGCACACCCTGTCTCCATGCCAACATATAGGGCCCAAGGAACCCCTGCGTACAGCTACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000064778.8
ENST00000356467.5
ENST00000450446.6
CDS GCA 72 bp GGGTGTAGTCAGCAGGGTACTGAAAGCCGCAGAGGATaGTTGGTAAGTTCGGTTCTCGGTCCCGGTGTCCAC +
Preference number: 6 (lower is better)
Translates to: GCSQQGTESRRG*LVSSVLGPGVH
Trigger: GTGGACACCGGGACCGAGAACCGAACTTACCAAGCATCCTCTGCGGCTTTCAGTACCCTGCTGACTACACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450446.6
CDS CAA 72 bp GGGGGTGGAGCAGTGTTACTCTGGGTCGGTGGGACCTaGTATGGTGTCCCCGCAGTATATCTGAAAGCCGCA +
Preference number: 6 (lower is better)
Translates to: GGGAVLLWVGGT*YGVPAVYLKAA
Trigger: TGCGGCTTTCAGATATACTGCGGGGACACCATACAAGGTCCCACCGACCCAGAGTAACACTGCTCCACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS GCA 72 bp TGGTGTCCCCGCAGTATATCTGAAAGCCGCAGAGGATaGTTGGTAAGTTCGGTTCTCGGTCCCGGTGTCCAC +
Preference number: 6 (lower is better)
Translates to: WCPRSISESRRG*LVSSVLGPGVH
Trigger: GTGGACACCGGGACCGAGAACCGAACTTACCAAGCATCCTCTGCGGCTTTCAGATATACTGCGGGGACACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS CCA 72 bp GAAGGTGCCTTCAGTGCCACAGGAAGACGAGTTCTGTaGCCAGGCCTGTTTCATCAGCAGAGTTGCTGGAGC +
Preference number: 6 (lower is better)
Translates to: EGAFSATGRRVL*PGLFHQQSCWS
Trigger: GCTCCAGCAACTCTGCTGATGAAACAGGCCTGGCCACAGAACTCGTCTTCCTGTGGCACTGAAGGCACCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356467.5
ENST00000450446.6
CDS CAA 72 bp TGTCCCCGCAGTATATCTGAAAGCCGCAGAGGATGCTaGGTAAGTTCGGTTCTCGGTCCCGGTGTCCACTGG +
Preference number: 6 (lower is better)
Translates to: CPRSISESRRGC*VSSVLGPGVHW
Trigger: CCAGTGGACACCGGGACCGAGAACCGAACTTACCAAGCATCCTCTGCGGCTTTCAGATATACTGCGGGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS CAA 72 bp TGTAGTCAGCAGGGTACTGAAAGCCGCAGAGGATGCTaGGTAAGTTCGGTTCTCGGTCCCGGTGTCCACTGG +
Preference number: 6 (lower is better)
Translates to: CSQQGTESRRGC*VSSVLGPGVHW
Trigger: CCAGTGGACACCGGGACCGAGAACCGAACTTACCAAGCATCCTCTGCGGCTTTCAGTACCCTGCTGACTACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450446.6
CDS GCA 72 bp CCACCTCTGCCTGAAAATACTGAAAGCCGCAGAGGATaGTTGGTAAGTTCGGTTCTCGGTCCCGGTGTCCAC +
Preference number: 6 (lower is better)
Translates to: PPLPENTESRRG*LVSSVLGPGVH
Trigger: GTGGACACCGGGACCGAGAACCGAACTTACCAAGCATCCTCTGCGGCTTTCAGTATTTTCAGGCAGAGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000632101.1
CDS CCA 72 bp GCAGGAACTGAAACTCTGGAGCATAACTGGGACTATTaGTGGGGTACAGGCTGGGATTGTAGGCAGGGGCAG +
Preference number: 6 (lower is better)
Translates to: AGTETLEHNWDY*WGTGWDCRQGQ
Trigger: CTGCCCCTGCCTACAATCCCAGCCTGTACCCCACCAATAGTCCCAGTTATGCTCCAGAGTTTCAGTTCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000632101.1
CDS CCA 72 bp TGGAGCAGTGTTACTCTGGGTCGGTGGGACCTTGTATaGTGTCCCCGCAGTATATCTGAAAGCCGCAGAGGA +
Preference number: 6 (lower is better)
Translates to: WSSVTLGRWDLV*CPRSISESRRG
Trigger: TCCTCTGCGGCTTTCAGATATACTGCGGGGACACCATACAAGGTCCCACCGACCCAGAGTAACACTGCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064778.8
ENST00000356467.5
CDS CCA 72 bp TCATCAGCAGAGTTGCTGGAGCATAACTGGGACTATTaGTGGGGTACAGGCTGGGATTGTAGGCAGGGGCAG +
Preference number: 6 (lower is better)
Translates to: SSAELLEHNWDY*WGTGWDCRQGQ
Trigger: CTGCCCCTGCCTACAATCCCAGCCTGTACCCCACCAATAGTCCCAGTTATGCTCCAGCAACTCTGCTGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356467.5
ENST00000450446.6
CDS CCA 72 bp CCATTTCCTCCTTACCTGGAGCATAACTGGGACTATTaGTGGGGTACAGGCTGGGATTGTAGGCAGGGGCAG +
Preference number: 6 (lower is better)
Translates to: PFPPYLEHNWDY*WGTGWDCRQGQ
Trigger: CTGCCCCTGCCTACAATCCCAGCCTGTACCCCACCAATAGTCCCAGTTATGCTCCAGGTAAGGAGGAAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432223.2
CDS CAA 72 bp CCTCTGCCTGAAAATACTGAAAGCCGCAGAGGATGCTaGGTAAGTTCGGTTCTCGGTCCCGGTGTCCACTGG +
Preference number: 6 (lower is better)
Translates to: PLPENTESRRGC*VSSVLGPGVHW
Trigger: CCAGTGGACACCGGGACCGAGAACCGAACTTACCAAGCATCCTCTGCGGCTTTCAGTATTTTCAGGCAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000632101.1
CDS CCA 72 bp GAAGGTGCCTTCAGTGCCACAGGAAGACGAGTTCTGTaGCCAGGCCTGTTTCATCAGCAGAGTTGCATAAGC +
Preference number: 6 (lower is better)
Translates to: EGAFSATGRRVL*PGLFHQQSCIS
Trigger: GCTTATGCAACTCTGCTGATGAAACAGGCCTGGCCACAGAACTCGTCTTCCTGTGGCACTGAAGGCACCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000064778.8
CDS CCA 72 bp GAAGGTGCCTTCAGTGCCACAGGAAGACGAGTTCTGTaGCCAGGCCTGTTTCATCAGCAGAGTTGCTTCATG +
Preference number: 6 (lower is better)
Translates to: EGAFSATGRRVL*PGLFHQQSCFM
Trigger: CATGAAGCAACTCTGCTGATGAAACAGGCCTGGCCACAGAACTCGTCTTCCTGTGGCACTGAAGGCACCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000632101.1
CDS CAA 72 bp ACGAGTTCTGTGGCCAGGCCTGTTTCATCAGCAGAGTaGCTTCATGGTGTCCATAAGCTGAATGCAGGAACT +
Preference number: 6 (lower is better)
Translates to: TSSVARPVSSAE*LHGVHKLNAGT
Trigger: AGTTCCTGCATTCAGCTTATGGACACCATGAAGCAACTCTGCTGATGAAACAGGCCTGGCCACAGAACTCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000632101.1
CDS CCA 72 bp AGCTTATCTCAGCTTGAAAACCATCTCTTTGCCCTCTaGTGGCAAGAGCATGTGTGTGTGTGTGTGTGTGTG +
Preference number: 6 (lower is better)
Translates to: SLSQLENHLFAL*WQEHVCVCVCV
Trigger: CACACACACACACACACACACATGCTCTTGCCACCAGAGGGCAAAGAGATGGTTTTCAAGCTGAGATAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432223.2
CDS TCA 72 bp ATTTGGACATTGCTTGGGAGAGCAGAAAAGGTTCTATaGGGAGGATGCAGGTCTCAGACATTCCAGCATAGG +
Preference number: 6 (lower is better)
Translates to: IWTLLGRAEKVL*GGCRSQTFQHR
Trigger: CCTATGCTGGAATGTCTGAGACCTGCATCCTCCTCATAGAACCTTTTCTGCTCTCCCAAGCAATGTCCAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432223.2
CDS CCA 72 bp TTATCTCAGCTTGAAAACCATCTCTTTGCCCTCTGGTaGCAAGAGCATGTGTGTGTGTGTGTGTGTGTGTGT +
Preference number: 6 (lower is better)
Translates to: LSQLENHLFALW*QEHVCVCVCVC
Trigger: ACACACACACACACACACACACACATGCTCTTGCCACCAGAGGGCAAAGAGATGGTTTTCAAGCTGAGATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432223.2
CDS TCA 72 bp TTTCATCAGCAGAGTTGCTTCATGGTGTCCATAAGCTaGATGCAGGAACTGAAACTCTGGAGCATAACTGGG +
Preference number: 6 (lower is better)
Translates to: FHQQSCFMVSIS*MQELKLWSITG
Trigger: CCCAGTTATGCTCCAGAGTTTCAGTTCCTGCATTCAGCTTATGGACACCATGAAGCAACTCTGCTGATGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000632101.1
CDS CAA 72 bp AAACAAGTAGCTTATCTCAGCTTGAAAACCATCTCTTaGCCCTCTGGTGGCAAGAGCATGTGTGTGTGTGTG +
Preference number: 6 (lower is better)
Translates to: KQVAYLSLKTIS*PSGGKSMCVCV
Trigger: CACACACACACACATGCTCTTGCCACCAGAGGGCAAAGAGATGGTTTTCAAGCTGAGATAAGCTACTTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432223.2