RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM167A (Homo sapiens)

Ensembl gene IDs: ENSG00000154319

Ensembl transcript IDs: ENST00000284486.9, ENST00000527445.1, ENST00000528111.1, ENST00000528897.1, ENST00000531564.1, ENST00000531804.5, ENST00000534308.1, ENST00000648766.1

Found 465 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCAGTCCCAGGGACCCCTGCCTCCGGGAGACCCACTGGAGTAACTTaGCCTCAGCTTCCTCTGACACCCCTCCAGCCCAAGCCCTCCGCT +
Preference number: 1 (lower is better)
Translates to: PVPGTPASGRPTGVT*PQLPLTPLQPKPSA
Trigger: AGCGGAGGGCTTGGGCTGGAGGGGTGTCAGAGGAAGCTGAGGCCAAGTTACTCCAGTGGGTCTCCCGGAGGCAGGGGTCCCTGGGACTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
3UTR CCA 90 bp GGACCTGCCTGGTTCAGTCACCAGTGGTCTCCCAGGCTGTCACCCTaGGGTGTGGGTGGCAGTGAAGAGGCTCTTTGGAGATGCATGTGG +
Preference number: 1 (lower is better)
Translates to: GPAWFSHQWSPRLSP*GVGGSEEALWRCMW
Trigger: CCACATGCATCTCCAAAGAGCCTCTTCACTGCCACCCACACCCCAGGGTGACAGCCTGGGAGACCACTGGTGACTGAACCAGGCAGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR GCA 90 bp AGCCAGATGCCGTGCGTAGACCATGGGACAGTGATTAGTGACACATaGCCTGTGGGGCCACTGTCAGTGCCTTGCTCCACCTTGACCCAA +
Preference number: 1 (lower is better)
Translates to: SQMPCVDHGTVISDT*PVGPLSVPCSTLTQ
Trigger: TTGGGTCAAGGTGGAGCAAGGCACTGACAGTGGCCCCACAGGGCATGTGTCACTAATCACTGTCCCATGGTCTACGCACGGCATCTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR CCA 90 bp TGCAGAGCTCTTTGGGTAGTAAGCAAGAGCCAGTCACAGAGACACTaGCATCCACACCCAGGGCCCCTGGGTGGGAGAGCACCACTGAAT +
Preference number: 1 (lower is better)
Translates to: CRALWVVSKSQSQRH*HPHPGPLGGRAPLN
Trigger: ATTCAGTGGTGCTCTCCCACCCAGGGGCCCTGGGTGTGGATGCCAGTGTCTCTGTGACTGGCTCTTGCTTACTACCCAAAGAGCTCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
3UTR CCA 90 bp GCAGTGAAGAGGCTCTTTGGAGATGCATGTGGCCAGGGGAGACAATaGGGACATCTGTGCTTGTTGCACCCAAGCTACGCTAGTGCCCCC +
Preference number: 1 (lower is better)
Translates to: AVKRLFGDACGQGRQ*GHLCLLHPSYASAP
Trigger: GGGGGCACTAGCGTAGCTTGGGTGCAACAAGCACAGATGTCCCCATTGTCTCCCCTGGCCACATGCATCTCCAAAGAGCCTCTTCACTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR GCA 90 bp ACGCCCCTGCAGGAGAATTCAGTTATGGAAAATGCTTTCAGGACCTaGCTGGTTCAGTCACCAGTGGTCTCCCAGGCTGTCACCCTGGGG +
Preference number: 1 (lower is better)
Translates to: TPLQENSVMENAFRT*LVQSPVVSQAVTLG
Trigger: CCCCAGGGTGACAGCCTGGGAGACCACTGGTGACTGAACCAGGCAGGTCCTGAAAGCATTTTCCATAACTGAATTCTCCTGCAGGGGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR TCA 90 bp TCTCCCCTATGTGGGTCACGATGTGTGGGTGGACACGGGCCCCACTaGGATTACACAGGAAGAAGTCACAGTAGACAGAGCAGCCAGATG +
Preference number: 1 (lower is better)
Translates to: SPLCGSRCVGGHGPH*DYTGRSHSRQSSQM
Trigger: CATCTGGCTGCTCTGTCTACTGTGACTTCTTCCTGTGTAATCTCAGTGGGGCCCGTGTCCACCCACACATCGTGACCCACATAGGGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR TCA 90 bp GTGACACATGCCCTGTGGGGCCACTGTCAGTGCCTTGCTCCACCTTaGCCCAAATGTTCTGAATTGCAATACTCTGGGAGATGTGGGTGG +
Preference number: 1 (lower is better)
Translates to: VTHALWGHCQCLAPP*PKCSELQYSGRCGW
Trigger: CCACCCACATCTCCCAGAGTATTGCAATTCAGAACATTTGGGTCAAGGTGGAGCAAGGCACTGACAGTGGCCCCACAGGGCATGTGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR GCA 90 bp AGGTTGGCAGGAAAGGAATGCGTCTTCAGGACTTGGCAGTGTTTGTaGAGAGCTCTGAGGAAGGACAGCAGTACATGGTCCTCAGGCCTG +
Preference number: 1 (lower is better)
Translates to: RLAGKECVFRTWQCL*RALRKDSSTWSSGL
Trigger: CAGGCCTGAGGACCATGTACTGCTGTCCTTCCTCAGAGCTCTGCACAAACACTGCCAAGTCCTGAAGACGCATTCCTTTCCTGCCAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR TCA 90 bp ATTGATTATGTAATAGCACTTGGTATTGCTACAGGGTGTGGGTCTTaGACTCGGTCAGGCATCGTCAAGCCTGCCCAGGCCCTCCAGGCC +
Preference number: 1 (lower is better)
Translates to: IDYVIALGIATGCGS*TRSGIVKPAQALQA
Trigger: GGCCTGGAGGGCCTGGGCAGGCTTGACGATGCCTGACCGAGTTCAAGACCCACACCCTGTAGCAATACCAAGTGCTATTACATAATCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR GCA 90 bp GATTACACAGGAAGAAGTCACAGTAGACAGAGCAGCCAGATGCCGTaGGTAGACCATGGGACAGTGATTAGTGACACATGCCCTGTGGGG +
Preference number: 1 (lower is better)
Translates to: DYTGRSHSRQSSQMP*VDHGTVISDTCPVG
Trigger: CCCCACAGGGCATGTGTCACTAATCACTGTCCCATGGTCTACGCACGGCATCTGGCTGCTCTGTCTACTGTGACTTCTTCCTGTGTAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR GCA 90 bp CGATGCTTGGGGATGGCAGAGAGATGGATGGATAATGAGTACAACTaGAAACAGCACTGTACACATGTGGTGAGCCAGGAGGCTGGGACG +
Preference number: 1 (lower is better)
Translates to: RCLGMAERWMDNEYN*KQHCTHVVSQEAGT
Trigger: CGTCCCAGCCTCCTGGCTCACCACATGTGTACAGTGCTGTTTGCAGTTGTACTCATTATCCATCCATCTCTCTGCCATCCCCAAGCATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR GCA 90 bp AAGGCATCAAGACATGACCACGCATGGCAGTGTCGGTGGAGAGTTTaGGTTTTACACCCAGCGATGCTTGGGGATGGCAGAGAGATGGAT +
Preference number: 1 (lower is better)
Translates to: KASRHDHAWQCRWRV*VLHPAMLGDGREMD
Trigger: ATCCATCTCTCTGCCATCCCCAAGCATCGCTGGGTGTAAAACGCAAACTCTCCACCGACACTGCCATGCGTGGTCATGTCTTGATGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR GCA 90 bp ATACTTAGAGGACAGCAACAGCACGTGAGACAGGCACATCTGACATaGCTAATTTCCCCCAAGGCCCTTGCGGGACAGCCTTCTGCAAAA +
Preference number: 1 (lower is better)
Translates to: ILRGQQQHVRQAHLT*LISPKALAGQPSAK
Trigger: TTTTGCAGAAGGCTGTCCCGCAAGGGCCTTGGGGGAAATTAGGCATGTCAGATGTGCCTGTCTCACGTGCTGTTGCTGTCCTCTAAGTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284486.9
ENST00000534308.1
3UTR GCA 90 bp ACGCATGGCAGTGTCGGTGGAGAGTTTGCGTTTTACACCCAGCGATaGTTGGGGATGGCAGAGAGATGGATGGATAATGAGTACAACTGC +
Preference number: 1 (lower is better)
Translates to: THGSVGGEFAFYTQR*LGMAERWMDNEYNC
Trigger: GCAGTTGTACTCATTATCCATCCATCTCTCTGCCATCCCCAAGCATCGCTGGGTGTAAAACGCAAACTCTCCACCGACACTGCCATGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR CCA 90 bp TCTCCTTTAACATCTTGGTTGGAGCGGCCCTTCTGCAGAGCTCTTTaGGTAGTAAGCAAGAGCCAGTCACAGAGACACTGGCATCCACAC +
Preference number: 1 (lower is better)
Translates to: SPLTSWLERPFCRAL*VVSKSQSQRHWHPH
Trigger: GTGTGGATGCCAGTGTCTCTGTGACTGGCTCTTGCTTACTACCCAAAGAGCTCTGCAGAAGGGCCGCTCCAACCAAGATGTTAAAGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
3UTR CCA 90 bp TGGAGGGATGGATTATGGTGGGAACCCAGGTCTCCTTTAACATCTTaGTTGGAGCGGCCCTTCTGCAGAGCTCTTTGGGTAGTAAGCAAG +
Preference number: 1 (lower is better)
Translates to: WRDGLWWEPRSPLTS*LERPFCRALWVVSK
Trigger: CTTGCTTACTACCCAAAGAGCTCTGCAGAAGGGCCGCTCCAACCAAGATGTTAAAGGAGACCTGGGTTCCCACCATAATCCATCCCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
3UTR CCA 90 bp TTGATAGCTACTGAGCCCCTGAAGGCATCAAGACATGACCACGCATaGCAGTGTCGGTGGAGAGTTTGCGTTTTACACCCAGCGATGCTT +
Preference number: 1 (lower is better)
Translates to: LIATEPLKASRHDHA*QCRWRVCVLHPAML
Trigger: AAGCATCGCTGGGTGTAAAACGCAAACTCTCCACCGACACTGCCATGCGTGGTCATGTCTTGATGCCTTCAGGGGCTCAGTAGCTATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR CCA 90 bp AGCAGTACATGGTCCTCAGGCCTGCAGACTTCATTGCACAGAGCATaGCAGACAGTAGATCTTGGCTGCGTTGTTCTGCCTACTTTGAAG +
Preference number: 1 (lower is better)
Translates to: SSTWSSGLQTSLHRA*QTVDLGCVVLPTLK
Trigger: CTTCAAAGTAGGCAGAACAACGCAGCCAAGATCTACTGTCTGCCATGCTCTGTGCAATGAAGTCTGCAGGCCTGAGGACCATGTACTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR CCA 90 bp AGGCCTGCAGACTTCATTGCACAGAGCATGGCAGACAGTAGATCTTaGCTGCGTTGTTCTGCCTACTTTGAAGGAGGCATAGAACTTCTG +
Preference number: 1 (lower is better)
Translates to: RPADFIAQSMADSRS*LRCSAYFEGGIELL
Trigger: CAGAAGTTCTATGCCTCCTTCAAAGTAGGCAGAACAACGCAGCCAAGATCTACTGTCTGCCATGCTCTGTGCAATGAAGTCTGCAGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR CCA 90 bp GTGTCGGTGGAGAGTTTGCGTTTTACACCCAGCGATGCTTGGGGATaGCAGAGAGATGGATGGATAATGAGTACAACTGCAAACAGCACT +
Preference number: 1 (lower is better)
Translates to: VSVESLRFTPSDAWG*QRDGWIMSTTANST
Trigger: AGTGCTGTTTGCAGTTGTACTCATTATCCATCCATCTCTCTGCCATCCCCAAGCATCGCTGGGTGTAAAACGCAAACTCTCCACCGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR CCA 90 bp ATGGCAGTGTCGGTGGAGAGTTTGCGTTTTACACCCAGCGATGCTTaGGGATGGCAGAGAGATGGATGGATAATGAGTACAACTGCAAAC +
Preference number: 1 (lower is better)
Translates to: MAVSVESLRFTPSDA*GWQRDGWIMSTTAN
Trigger: GTTTGCAGTTGTACTCATTATCCATCCATCTCTCTGCCATCCCCAAGCATCGCTGGGTGTAAAACGCAAACTCTCCACCGACACTGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR CCA 90 bp GAGTTTGCGTTTTACACCCAGCGATGCTTGGGGATGGCAGAGAGATaGATGGATAATGAGTACAACTGCAAACAGCACTGTACACATGTG +
Preference number: 1 (lower is better)
Translates to: EFAFYTQRCLGMAER*MDNEYNCKQHCTHV
Trigger: CACATGTGTACAGTGCTGTTTGCAGTTGTACTCATTATCCATCCATCTCTCTGCCATCCCCAAGCATCGCTGGGTGTAAAACGCAAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR CCA 90 bp AGGGGTTGGCAGTGTGCGGGTTTGGCAAAGCATCACGACCATCTTTaGGGTTCAAGTTCATTGACATGTGATCTACTAGGCATTATCAAT +
Preference number: 1 (lower is better)
Translates to: RGWQCAGLAKHHDHL*GSSSLTCDLLGIIN
Trigger: ATTGATAATGCCTAGTAGATCACATGTCAATGAACTTGAACCCCAAAGATGGTCGTGATGCTTTGCCAAACCCGCACACTGCCAACCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR CCA 90 bp TGGTTAGTTGTGTTCACTGTGCAAAGTAAGGAAGCCAGTCAACACTaGACGATGTTTAGAAAACATCGCTGTCCCCCTCCACTTCTCATC +
Preference number: 1 (lower is better)
Translates to: WLVVFTVQSKEASQH*TMFRKHRCPPPLLI
Trigger: GATGAGAAGTGGAGGGGGACAGCGATGTTTTCTAAACATCGTCCAGTGTTGACTGGCTTCCTTACTTTGCACAGTGAACACAACTAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR TCA 90 bp TGGTTTCACACATCAATATTCTATAGCCTAAACAGCTGTGCAACCTaGGGGAAGTCCTTCTCCTCCCCCAGGTTTCACTTTGCTCCTTTA +
Preference number: 1 (lower is better)
Translates to: WFHTSIFYSLNSCAT*GKSFSSPRFHFAPL
Trigger: TAAAGGAGCAAAGTGAAACCTGGGGGAGGAGAAGGACTTCCCTCAGGTTGCACAGCTGTTTAGGCTATAGAATATTGATGTGTGAAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR TCA 90 bp GTTGGGAGGGAGAAACTCTTAAAATCAAATCCTACGCACTGTAGTTaGCCTACACAAGTGGCTTCCGCATTTGGACAAAAATCAGTTACT +
Preference number: 1 (lower is better)
Translates to: VGREKLLKSNPTHCS*PTQVASAFGQKSVT
Trigger: AGTAACTGATTTTTGTCCAAATGCGGAAGCCACTTGTGTAGGTCAACTACAGTGCGTAGGATTTGATTTTAAGAGTTTCTCCCTCCCAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR GCA 90 bp AAAGCAAGCAAGCACTGGGTTACCCAAGCAACTAAATCACTCAGTTaGATCCAACTTAATTGGACTGACTACATTCAGCTAAATCTTTCC +
Preference number: 1 (lower is better)
Translates to: KASKHWVTQATKSLS*IQLNWTDYIQLNLS
Trigger: GGAAAGATTTAGCTGAATGTAGTCAGTCCAATTAAGTTGGATGCAACTGAGTGATTTAGTTGCTTGGGTAACCCAGTGCTTGCTTGCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR CCA 90 bp TGGGTTACCCAAGCAACTAAATCACTCAGTTGCATCCAACTTAATTaGACTGACTACATTCAGCTAAATCTTTCCATTTTCGCTGAACCC +
Preference number: 1 (lower is better)
Translates to: WVTQATKSLSCIQLN*TDYIQLNLSIFAEP
Trigger: GGGTTCAGCGAAAATGGAAAGATTTAGCTGAATGTAGTCAGTCCAATTAAGTTGGATGCAACTGAGTGATTTAGTTGCTTGGGTAACCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR CAA 90 bp GCCAGTCCCAGGGACCCCTGCCTCCGGGAGACCCACTGGAGTAACTaGGCCTCAGCTTCCTCTGACACCCCTCCAGCCCAAGCCCTCCGC +
Preference number: 2 (lower is better)
Translates to: ASPRDPCLRETHWSN*ASASSDTPPAQALR
Trigger: GCGGAGGGCTTGGGCTGGAGGGGTGTCAGAGGAAGCTGAGGCCAAGTTACTCCAGTGGGTCTCCCGGAGGCAGGGGTCCCTGGGACTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
3UTR-3UTR GCA 90 bp CATGACCACGCATGGCAGTGTCGGTGGAGAGTTTGCGTTTTACACCCAGCGATGAGTCCCAGGGACCCCTaGCTCCGGGAGACCCACTGG +
Preference number: 2 (lower is better)
Translates to: HDHAWQCRWRVCVLHPAMSPRDP*LRETHW
Trigger: CCAGTGGGTCTCCCGGAGGCAGGGGTCCCTGGGACT...CATCGCTGGGTGTAAAACGCAAACTCTCCACCGACACTGCCATGCGTGGTCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR-3UTR CCA 90 bp ACATGCCCTGTGGGGCCACTGTCAGTGCCTTGCTCCACCTTGACCCAAATGTTCGCTCACCAGAGACACTaGCTGCCAGCCACTGGGGCT +
Preference number: 2 (lower is better)
Translates to: TCPVGPLSVPCSTLTQMFAHQRH*LPATGA
Trigger: AGCCCCAGTGGCTGGCAGCCAGTGTCTCTGGTGAGC...GAACATTTGGGTCAAGGTGGAGCAAGGCACTGACAGTGGCCCCACAGGGCATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR-3UTR CCA 90 bp TTGAACTCGGTCAGGCATCGTCAAGCCTGCCCAGGCCCTCCAGGCCTCTTTGATAGGATTCTACGGGTCTaGCCGAGGGACCCCTGCCAT +
Preference number: 2 (lower is better)
Translates to: LNSVRHRQACPGPPGLFDRILRV*PRDPCH
Trigger: ATGGCAGGGGTCCCTCGGCCAGACCCGTAGAATCCT...ATCAAAGAGGCCTGGAGGGCCTGGGCAGGCTTGACGATGCCTGACCGAGTTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR CAA 90 bp ACTCGGTCAGGCATCGTCAAGCCTGCCCAGGCCCTCCAGGCCTCTTaGATAGCTACTGAGCCCCTGAAGGCATCAAGACATGACCACGCA +
Preference number: 2 (lower is better)
Translates to: TRSGIVKPAQALQAS*IATEPLKASRHDHA
Trigger: TGCGTGGTCATGTCTTGATGCCTTCAGGGGCTCAGTAGCTATCAAAGAGGCCTGGAGGGCCTGGGCAGGCTTGACGATGCCTGACCGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR-3UTR CCA 90 bp CACGTGAGACAGGCACATCTGACATGCCTAATTTCCCCCAAGGCCCTTGCGGGACAGTCACAGAGACACTaGCATCCACACCCAGGGCCC +
Preference number: 2 (lower is better)
Translates to: HVRQAHLTCLISPKALAGQSQRH*HPHPGP
Trigger: GGGCCCTGGGTGTGGATGCCAGTGTCTCTGTGACTG...TCCCGCAAGGGCCTTGGGGGAAATTAGGCATGTCAGATGTGCCTGTCTCACGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284486.9
ENST00000534308.1
3UTR-3UTR TCA 90 bp ATGACCACGCATGGCAGTGTCGGTGGAGAGTTTGCGTTTTACACCCAGCGATGCGTGGGAGAGCACCACTaGATAGGTCCTGGGGCCCTT +
Preference number: 2 (lower is better)
Translates to: MTTHGSVGGEFAFYTQRCVGEHH*IGPGAL
Trigger: AAGGGCCCCAGGACCTATTCAGTGGTGCTCTCCCAC...GCATCGCTGGGTGTAAAACGCAAACTCTCCACCGACACTGCCATGCGTGGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR-3UTR CCA 90 bp GGGACAGTGATTAGTGACACATGCCCTGTGGGGCCACTGTCAGTGCCTTGCTCCGTGACCGTGGAGGGATaGATTATGGTGGGAACCCAG +
Preference number: 2 (lower is better)
Translates to: GTVISDTCPVGPLSVPCSVTVEG*IMVGTQ
Trigger: CTGGGTTCCCACCATAATCCATCCCTCCACGGTCAC...GGAGCAAGGCACTGACAGTGGCCCCACAGGGCATGTGTCACTAATCACTGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR-3UTR CCA 90 bp CATGACCACGCATGGCAGTGTCGGTGGAGAGTTTGCGTTTTACACCCAGCGATGAGAGGAGGCTCAGGATaGGCCTCTGGGCTCCCTAGA +
Preference number: 2 (lower is better)
Translates to: HDHAWQCRWRVCVLHPAMRGGSG*ASGLPR
Trigger: TCTAGGGAGCCCAGAGGCCCATCCTGAGCCTCCTCT...CATCGCTGGGTGTAAAACGCAAACTCTCCACCGACACTGCCATGCGTGGTCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR-3UTR GCA 90 bp TTGAACTCGGTCAGGCATCGTCAAGCCTGCCCAGGCCCTCCAGGCCTCTTTGATTTGGAGCGGCCCTTCTaGAGAGCTCTTTGGGTAGTA +
Preference number: 2 (lower is better)
Translates to: LNSVRHRQACPGPPGLFDLERPF*RALWVV
Trigger: TACTACCCAAAGAGCTCTGCAGAAGGGCCGCTCCAA...ATCAAAGAGGCCTGGAGGGCCTGGGCAGGCTTGACGATGCCTGACCGAGTTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR-3UTR CCA 90 bp TCCAGGAAACAGGAACGTGACCGTGGAGGGATGGATTATGGTGGGAACCCAGGTCTCCGGGAGACCCACTaGAGTAACTTGGCCTCAGCT +
Preference number: 2 (lower is better)
Translates to: SRKQERDRGGMDYGGNPGLRETH*SNLASA
Trigger: AGCTGAGGCCAAGTTACTCCAGTGGGTCTCCCGGAG...ACCTGGGTTCCCACCATAATCCATCCCTCCACGGTCACGTTCCTGTTTCCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
3UTR-3UTR CCA 90 bp GGGACAGTGATTAGTGACACATGCCCTGTGGGGCCACTGTCAGTGCCTTGCTCCAGTGAAGAGGCTCTTTaGAGATGCATGTGGCCAGGG +
Preference number: 2 (lower is better)
Translates to: GTVISDTCPVGPLSVPCSSEEAL*RCMWPG
Trigger: CCCTGGCCACATGCATCTCCAAAGAGCCTCTTCACT...GGAGCAAGGCACTGACAGTGGCCCCACAGGGCATGTGTCACTAATCACTGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR-3UTR TCA 90 bp AGTGATTCCAGGAAACAGGAACGTGACCGTGGAGGGATGGATTATGGTGGGAACGTGGGAGAGCACCACTaGATAGGTCCTGGGGCCCTT +
Preference number: 2 (lower is better)
Translates to: SDSRKQERDRGGMDYGGNVGEHH*IGPGAL
Trigger: AAGGGCCCCAGGACCTATTCAGTGGTGCTCTCCCAC...GTTCCCACCATAATCCATCCCTCCACGGTCACGTTCCTGTTTCCTGGAATCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
3UTR-3UTR CCA 90 bp CTTTGGGAATCCCAGTTCATAGCACCAGTGATTCCAGGAAACAGGAACGTGACCCAGTCACAGAGACACTaGCATCCACACCCAGGGCCC +
Preference number: 2 (lower is better)
Translates to: LWESQFIAPVIPGNRNVTQSQRH*HPHPGP
Trigger: GGGCCCTGGGTGTGGATGCCAGTGTCTCTGTGACTG...GGTCACGTTCCTGTTTCCTGGAATCACTGGTGCTATGAACTGGGATTCCCAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
3UTR-3UTR CCA 90 bp TTGAACTCGGTCAGGCATCGTCAAGCCTGCCCAGGCCCTCCAGGCCTCTTTGATAGGGATGGATTATGGTaGGAACCCAGGTCTCCTTTA +
Preference number: 2 (lower is better)
Translates to: LNSVRHRQACPGPPGLFDRDGLW*EPRSPL
Trigger: TAAAGGAGACCTGGGTTCCCACCATAATCCATCCCT...ATCAAAGAGGCCTGGAGGGCCTGGGCAGGCTTGACGATGCCTGACCGAGTTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR CAA 90 bp CTGAGGAAGGACAGCAGTACATGGTCCTCAGGCCTGCAGACTTCATaGCACAGAGCATGGCAGACAGTAGATCTTGGCTGCGTTGTTCTG +
Preference number: 2 (lower is better)
Translates to: LRKDSSTWSSGLQTS*HRAWQTVDLGCVVL
Trigger: CAGAACAACGCAGCCAAGATCTACTGTCTGCCATGCTCTGTGCAATGAAGTCTGCAGGCCTGAGGACCATGTACTGCTGTCCTTCCTCAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR CAA 90 bp AAGAGGTTGGCAGGAAAGGAATGCGTCTTCAGGACTTGGCAGTGTTaGTGCAGAGCTCTGAGGAAGGACAGCAGTACATGGTCCTCAGGC +
Preference number: 2 (lower is better)
Translates to: KRLAGKECVFRTWQC*CRALRKDSSTWSSG
Trigger: GCCTGAGGACCATGTACTGCTGTCCTTCCTCAGAGCTCTGCACAAACACTGCCAAGTCCTGAAGACGCATTCCTTTCCTGCCAACCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR CAA 90 bp GTGTGTAGGTCAGCCCGAGACCTCAAGGGCTTATCTGGAAAGAGGTaGGCAGGAAAGGAATGCGTCTTCAGGACTTGGCAGTGTTTGTGC +
Preference number: 2 (lower is better)
Translates to: VCRSARDLKGLSGKR*AGKECVFRTWQCLC
Trigger: GCACAAACACTGCCAAGTCCTGAAGACGCATTCCTTTCCTGCCAACCTCTTTCCAGATAAGCCCTTGAGGTCTCGGGCTGACCTACACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR-3UTR GCA 90 bp AAACAGGAACGTGACCGTGGAGGGATGGATTATGGTGGGAACCCAGGTCTCCTTTTGGAGCGGCCCTTCTaGAGAGCTCTTTGGGTAGTA +
Preference number: 2 (lower is better)
Translates to: KQERDRGGMDYGGNPGLLLERPF*RALWVV
Trigger: TACTACCCAAAGAGCTCTGCAGAAGGGCCGCTCCAA...AAGGAGACCTGGGTTCCCACCATAATCCATCCCTCCACGGTCACGTTCCTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
3UTR-3UTR GCA 90 bp ATGACCACGCATGGCAGTGTCGGTGGAGAGTTTGCGTTTTACACCCAGCGATGCACTTGGCAGTGTTTGTaGAGAGCTCTGAGGAAGGAC +
Preference number: 2 (lower is better)
Translates to: MTTHGSVGGEFAFYTQRCTWQCL*RALRKD
Trigger: GTCCTTCCTCAGAGCTCTGCACAAACACTGCCAAGT...GCATCGCTGGGTGTAAAACGCAAACTCTCCACCGACACTGCCATGCGTGGTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR-3UTR CCA 90 bp AGTTATGGAAAATGCTTTCAGGACCTGCCTGGTTCAGTCACCAGTGGTCTCCCACTCCGGGAGACCCACTaGAGTAACTTGGCCTCAGCT +
Preference number: 2 (lower is better)
Translates to: SYGKCFQDLPGSVTSGLPLRETH*SNLASA
Trigger: AGCTGAGGCCAAGTTACTCCAGTGGGTCTCCCGGAG...TGGGAGACCACTGGTGACTGAACCAGGCAGGTCCTGAAAGCATTTTCCATAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR-3UTR CCA 90 bp CATGACCACGCATGGCAGTGTCGGTGGAGAGTTTGCGTTTTACACCCAGCGATGTCTCCTTTAACATCTTaGTTGGAGCGGCCCTTCTGC +
Preference number: 2 (lower is better)
Translates to: HDHAWQCRWRVCVLHPAMSPLTS*LERPFC
Trigger: GCAGAAGGGCCGCTCCAACCAAGATGTTAAAGGAGA...CATCGCTGGGTGTAAAACGCAAACTCTCCACCGACACTGCCATGCGTGGTCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR-3UTR CCA 90 bp TTGAACTCGGTCAGGCATCGTCAAGCCTGCCCAGGCCCTCCAGGCCTCTTTGATTTTCAGAATATGGGATaGGCTTTCCTGCATGGGTTC +
Preference number: 2 (lower is better)
Translates to: LNSVRHRQACPGPPGLFDFQNMG*AFLHGF
Trigger: GAACCCATGCAGGAAAGCCCATCCCATATTCTGAAA...ATCAAAGAGGCCTGGAGGGCCTGGGCAGGCTTGACGATGCCTGACCGAGTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR CAA 90 bp GTCTCCTTTAACATCTTGGTTGGAGCGGCCCTTCTGCAGAGCTCTTaGGGTAGTAAGCAAGAGCCAGTCACAGAGACACTGGCATCCACA +
Preference number: 2 (lower is better)
Translates to: VSFNILVGAALLQSS*GSKQEPVTETLAST
Trigger: TGTGGATGCCAGTGTCTCTGTGACTGGCTCTTGCTTACTACCCAAAGAGCTCTGCAGAAGGGCCGCTCCAACCAAGATGTTAAAGGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
3UTR CAA 90 bp AGGGATGGATTATGGTGGGAACCCAGGTCTCCTTTAACATCTTGGTaGGAGCGGCCCTTCTGCAGAGCTCTTTGGGTAGTAAGCAAGAGC +
Preference number: 2 (lower is better)
Translates to: RDGLWWEPRSPLTSW*ERPFCRALWVVSKS
Trigger: GCTCTTGCTTACTACCCAAAGAGCTCTGCAGAAGGGCCGCTCCAACCAAGATGTTAAAGGAGACCTGGGTTCCCACCATAATCCATCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
3UTR CAA 90 bp GTGGAGGGATGGATTATGGTGGGAACCCAGGTCTCCTTTAACATCTaGGTTGGAGCGGCCCTTCTGCAGAGCTCTTTGGGTAGTAAGCAA +
Preference number: 2 (lower is better)
Translates to: VEGWIMVGTQVSFNI*VGAALLQSSLGSKQ
Trigger: TTGCTTACTACCCAAAGAGCTCTGCAGAAGGGCCGCTCCAACCAAGATGTTAAAGGAGACCTGGGTTCCCACCATAATCCATCCCTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
3UTR-3UTR TCA 90 bp TTGAACTCGGTCAGGCATCGTCAAGCCTGCCCAGGCCCTCCAGGCCTCTTTGATTTGACCCAAATGTTCTaGATTGCAATACTCTGGGAG +
Preference number: 2 (lower is better)
Translates to: LNSVRHRQACPGPPGLFDLTQMF*IAILWE
Trigger: CTCCCAGAGTATTGCAATTCAGAACATTTGGGTCAA...ATCAAAGAGGCCTGGAGGGCCTGGGCAGGCTTGACGATGCCTGACCGAGTTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR-3UTR GCA 90 bp ACATGCCCTGTGGGGCCACTGTCAGTGCCTTGCTCCACCTTGACCCAAATGTTCCCCCAGGTTTCACTTTaGTCCTTTACTAATGAGAGG +
Preference number: 2 (lower is better)
Translates to: TCPVGPLSVPCSTLTQMFPQVSL*SFTNER
Trigger: CCTCTCATTAGTAAAGGAGCAAAGTGAAACCTGGGG...GAACATTTGGGTCAAGGTGGAGCAAGGCACTGACAGTGGCCCCACAGGGCATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR-3UTR CCA 90 bp CATGACCACGCATGGCAGTGTCGGTGGAGAGTTTGCGTTTTACACCCAGCGATGTTCTGCAGAGCTCTTTaGGTAGTAAGCAAGAGCCAG +
Preference number: 2 (lower is better)
Translates to: HDHAWQCRWRVCVLHPAMFCRAL*VVSKSQ
Trigger: CTGGCTCTTGCTTACTACCCAAAGAGCTCTGCAGAA...CATCGCTGGGTGTAAAACGCAAACTCTCCACCGACACTGCCATGCGTGGTCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR-3UTR CCA 90 bp GGGAAGTCCTTCTCCTCCCCCAGGTTTCACTTTGCTCCTTTACTAATGAGAGGACTTTGGAGATGCATGTaGCCAGGGGAGACAATGGGG +
Preference number: 2 (lower is better)
Translates to: GKSFSSPRFHFAPLLMRGLWRCM*PGETMG
Trigger: CCCCATTGTCTCCCCTGGCCACATGCATCTCCAAAG...TCCTCTCATTAGTAAAGGAGCAAAGTGAAACCTGGGGGAGGAGAAGGACTTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR-3UTR CCA 90 bp CCTCAAGGGCTTATCTGGAAAGAGGTTGGCAGGAAAGGAATGCGTCTTCAGGACGCAGACAGTAGATCTTaGCTGCGTTGTTCTGCCTAC +
Preference number: 2 (lower is better)
Translates to: PQGLIWKEVGRKGMRLQDADSRS*LRCSAY
Trigger: GTAGGCAGAACAACGCAGCCAAGATCTACTGTCTGC...GTCCTGAAGACGCATTCCTTTCCTGCCAACCTCTTTCCAGATAAGCCCTTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR CAA 90 bp CATGGCAGTGTCGGTGGAGAGTTTGCGTTTTACACCCAGCGATGCTaGGGGATGGCAGAGAGATGGATGGATAATGAGTACAACTGCAAA +
Preference number: 2 (lower is better)
Translates to: HGSVGGEFAFYTQRC*GMAERWMDNEYNCK
Trigger: TTTGCAGTTGTACTCATTATCCATCCATCTCTCTGCCATCCCCAAGCATCGCTGGGTGTAAAACGCAAACTCTCCACCGACACTGCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR-3UTR TCA 90 bp TTATGTAATAGCACTTGGTATTGCTACAGGGTGTGGGTCTTGAACTCGGTCAGGGAGAGGGCAGTAAGGTaGCACCACCAGAATCCACCA +
Preference number: 2 (lower is better)
Translates to: LCNSTWYCYRVWVLNSVRERAVR*HHQNPP
Trigger: TGGTGGATTCTGGTGGTGTCACCTTACTGCCCTCTC...CCTGACCGAGTTCAAGACCCACACCCTGTAGCAATACCAAGTGCTATTACATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR-3UTR CCA 90 bp TTATGTAATAGCACTTGGTATTGCTACAGGGTGTGGGTCTTGAACTCGGTCAGGGGCAGTGTGCGGGTTTaGCAAAGCATCACGACCATC +
Preference number: 2 (lower is better)
Translates to: LCNSTWYCYRVWVLNSVRGSVRV*QSITTI
Trigger: GATGGTCGTGATGCTTTGCCAAACCCGCACACTGCC...CCTGACCGAGTTCAAGACCCACACCCTGTAGCAATACCAAGTGCTATTACATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR-3UTR CCA 90 bp TTATGTAATAGCACTTGGTATTGCTACAGGGTGTGGGTCTTGAACTCGGTCAGGAGACATGACCACGCATaGCAGTGTCGGTGGAGAGTT +
Preference number: 2 (lower is better)
Translates to: LCNSTWYCYRVWVLNSVRRHDHA*QCRWRV
Trigger: AACTCTCCACCGACACTGCCATGCGTGGTCATGTCT...CCTGACCGAGTTCAAGACCCACACCCTGTAGCAATACCAAGTGCTATTACATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR-3UTR GCA 90 bp TTGGGGATGGCAGAGAGATGGATGGATAATGAGTACAACTGCAAACAGCACTGTCAATGGGGACATCTGTaGTTGTTGCACCCAAGCTAC +
Preference number: 2 (lower is better)
Translates to: LGMAERWMDNEYNCKQHCQWGHL*LLHPSY
Trigger: GTAGCTTGGGTGCAACAAGCACAGATGTCCCCATTG...ACAGTGCTGTTTGCAGTTGTACTCATTATCCATCCATCTCTCTGCCATCCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR-3UTR CCA 90 bp TTATGTAATAGCACTTGGTATTGCTACAGGGTGTGGGTCTTGAACTCGGTCAGGTGCGTCTTCAGGACTTaGCAGTGTTTGTGCAGAGCT +
Preference number: 2 (lower is better)
Translates to: LCNSTWYCYRVWVLNSVRCVFRT*QCLCRA
Trigger: AGCTCTGCACAAACACTGCCAAGTCCTGAAGACGCA...CCTGACCGAGTTCAAGACCCACACCCTGTAGCAATACCAAGTGCTATTACATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR-3UTR TCA 90 bp GAGCAGGGACTTCACAAAGCTGAATTAATGTGGTTAGTTGTGTTCACTGTGCAACAGGAAACAGGAACGTaGCCGTGGAGGGATGGATTA +
Preference number: 2 (lower is better)
Translates to: EQGLHKAELMWLVVFTVQQETGT*PWRDGL
Trigger: TAATCCATCCCTCCACGGTCACGTTCCTGTTTCCTG...TTGCACAGTGAACACAACTAACCACATTAATTCAGCTTTGTGAAGTCCCTGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR-3UTR GCA 90 bp GTTTCACTTTGCTCCTTTACTAATGAGAGGACTCGACTAGATGACACCAAAGGTAATGCTTTCAGGACCTaGCTGGTTCAGTCACCAGTG +
Preference number: 2 (lower is better)
Translates to: VSLCSFTNERTRLDDTKGNAFRT*LVQSPV
Trigger: CACTGGTGACTGAACCAGGCAGGTCCTGAAAGCATT...ACCTTTGGTGTCATCTAGTCGAGTCCTCTCATTAGTAAAGGAGCAAAGTGAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR-3UTR TCA 90 bp AGACATTTAACTTATCCCCAAACATGTGTCTTGATCTTAGTTTCCACCCAGAGACCTACGCACTGTAGTTaGCCTACACAAGTGGCTTCC +
Preference number: 2 (lower is better)
Translates to: RHLTYPQTCVLILVSTQRPTHCS*PTQVAS
Trigger: GGAAGCCACTTGTGTAGGTCAACTACAGTGCGTAGG...TCTCTGGGTGGAAACTAAGATCAAGACACATGTTTGGGGATAAGTTAAATGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR-3UTR CCA 90 bp TTTTCAGAATATGGGATGGGCTTTCCTGCATGGGTTCAAGGATGTTTATGGCATCCTCAAGGGCTTATCTaGAAAGAGGTTGGCAGGAAA +
Preference number: 2 (lower is better)
Translates to: FSEYGMGFPAWVQGCLWHPQGLI*KEVGRK
Trigger: TTTCCTGCCAACCTCTTTCCAGATAAGCCCTTGAGG...ATGCCATAAACATCCTTGAACCCATGCAGGAAAGCCCATCCCATATTCTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR CAA 90 bp GCGGGTTTGGCAAAGCATCACGACCATCTTTGGGGTTCAAGTTCATaGACATGTGATCTACTAGGCATTATCAATAATGGTTTCACACAT +
Preference number: 2 (lower is better)
Translates to: AGLAKHHDHLWGSSS*TCDLLGIINNGFTH
Trigger: ATGTGTGAAACCATTATTGATAATGCCTAGTAGATCACATGTCAATGAACTTGAACCCCAAAGATGGTCGTGATGCTTTGCCAAACCCGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR CAA 90 bp CAAATCCTACGCACTGTAGTTGACCTACACAAGTGGCTTCCGCATTaGGACAAAAATCAGTTACTAACAAGTGAACAACACATCAGTAAC +
Preference number: 2 (lower is better)
Translates to: QILRTVVDLHKWLPH*DKNQLLTSEQHISN
Trigger: GTTACTGATGTGTTGTTCACTTGTTAGTAACTGATTTTTGTCCAAATGCGGAAGCCACTTGTGTAGGTCAACTACAGTGCGTAGGATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR-3UTR GCA 90 bp CAAGCAACTAAATCACTCAGTTGCATCCAACTTAATTGGACTGACTACATTCAGTGCGGGACAGCCTTCTaGAAAAATGACAGCTTTGTT +
Preference number: 2 (lower is better)
Translates to: QATKSLSCIQLNWTDYIQCGTAF*KNDSFV
Trigger: AACAAAGCTGTCATTTTTGCAGAAGGCTGTCCCGCA...CTGAATGTAGTCAGTCCAATTAAGTTGGATGCAACTGAGTGATTTAGTTGCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR-3UTR GCA 90 bp AGACATTTAACTTATCCCCAAACATGTGTCTTGATCTTAGTTTCCACCCAGAGAACTAAATCACTCAGTTaGATCCAACTTAATTGGACT +
Preference number: 2 (lower is better)
Translates to: RHLTYPQTCVLILVSTQRTKSLS*IQLNWT
Trigger: AGTCCAATTAAGTTGGATGCAACTGAGTGATTTAGT...TCTCTGGGTGGAAACTAAGATCAAGACACATGTTTGGGGATAAGTTAAATGTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR TCA 72 bp GGTGGGAGAGCACCACTGAATAGGTCCTGGGGCCCTTaGGTCGCCAGTCCCAGGGACCCCTGCCTCCGGGAG +
Preference number: 3 (lower is better)
Translates to: GGRAPLNRSWGP*VASPRDPCLRE
Trigger: CTCCCGGAGGCAGGGGTCCCTGGGACTGGCGACTCAAGGGCCCCAGGACCTATTCAGTGGTGCTCTCCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
3UTR CCA 72 bp GCCAGTCCCAGGGACCCCTGCCTCCGGGAGACCCACTaGAGTAACTTGGCCTCAGCTTCCTCTGACACCCCT +
Preference number: 3 (lower is better)
Translates to: ASPRDPCLRETH*SNLASASSDTP
Trigger: AGGGGTGTCAGAGGAAGCTGAGGCCAAGTTACTCCAGTGGGTCTCCCGGAGGCAGGGGTCCCTGGGACTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
3UTR-3UTR CAA 90 bp TCTGGCCGAGGGACCCCTGCCATGCCGTATGACCCCAGACTGACCTCCCTAACCGTCTCCTTTAACATCTaGGTTGGAGCGGCCCTTCTG +
Preference number: 3 (lower is better)
Translates to: SGRGTPAMPYDPRLTSLTVSFNI*VGAALL
Trigger: CAGAAGGGCCGCTCCAACCAAGATGTTAAAGGAGAC...GGTTAGGGAGGTCAGTCTGGGGTCATACGGCATGGCAGGGGTCCCTCGGCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR-3UTR CAA 90 bp GGGACAGTGATTAGTGACACATGCCCTGTGGGGCCACTGTCAGTGCCTTGCTCCTTTCCCCCAAGGCCCTaGCGGGACAGCCTTCTGCAA +
Preference number: 3 (lower is better)
Translates to: GTVISDTCPVGPLSVPCSFPPRP*RDSLLQ
Trigger: TTGCAGAAGGCTGTCCCGCAAGGGCCTTGGGGGAAA...GGAGCAAGGCACTGACAGTGGCCCCACAGGGCATGTGTCACTAATCACTGTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR GCA 72 bp CCGTGCGTAGACCATGGGACAGTGATTAGTGACACATaGCCTGTGGGGCCACTGTCAGTGCCTTGCTCCACC +
Preference number: 3 (lower is better)
Translates to: PCVDHGTVISDT*PVGPLSVPCST
Trigger: GGTGGAGCAAGGCACTGACAGTGGCCCCACAGGGCATGTGTCACTAATCACTGTCCCATGGTCTACGCACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR-3UTR CAA 90 bp CCGTGCGTAGACCATGGGACAGTGATTAGTGACACATGCCCTGTGGGGCCACTGTCTGGGCTCCCTAGATaGTCTTTCCAGAGAGGGCAG +
Preference number: 3 (lower is better)
Translates to: PCVDHGTVISDTCPVGPLSGLPR*SFQRGQ
Trigger: CTGCCCTCTCTGGAAAGACAATCTAGGGAGCCCAGA...CAGTGGCCCCACAGGGCATGTGTCACTAATCACTGTCCCATGGTCTACGCACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR GCA 72 bp GGACAGCAACAGCACGTGAGACAGGCACATCTGACATaGCTAATTTCCCCCAAGGCCCTTGCGGGACAGCCT +
Preference number: 3 (lower is better)
Translates to: GQQQHVRQAHLT*LISPKALAGQP
Trigger: AGGCTGTCCCGCAAGGGCCTTGGGGGAAATTAGGCATGTCAGATGTGCCTGTCTCACGTGCTGTTGCTGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284486.9
ENST00000534308.1
3UTR CCA 72 bp AGCAACCTCTCCCCTATGTGGGTCACGATGTGTGGGTaGACACGGGCCCCACTGAGATTACACAGGAAGAAG +
Preference number: 3 (lower is better)
Translates to: SNLSPMWVTMCG*TRAPLRLHRKK
Trigger: CTTCTTCCTGTGTAATCTCAGTGGGGCCCGTGTCCACCCACACATCGTGACCCACATAGGGGAGAGGTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR TCA 72 bp TGTGGGTCACGATGTGTGGGTGGACACGGGCCCCACTaGGATTACACAGGAAGAAGTCACAGTAGACAGAGC +
Preference number: 3 (lower is better)
Translates to: CGSRCVGGHGPH*DYTGRSHSRQS
Trigger: GCTCTGTCTACTGTGACTTCTTCCTGTGTAATCTCAGTGGGGCCCGTGTCCACCCACACATCGTGACCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR TCA 72 bp AGGAGGCTGGGACGGAGGTTAGGCCAATGTTGCTGCTaGCTCATAGACCCACAGAGAGCAGGGACTTCACAA +
Preference number: 3 (lower is better)
Translates to: RRLGRRLGQCCC*LIDPQRAGTSQ
Trigger: TTGTGAAGTCCCTGCTCTCTGTGGGTCTATGAGTCAGCAGCAACATTGGCCTAACCTCCGTCCCAGCCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR TCA 72 bp GTAATAGCACTTGGTATTGCTACAGGGTGTGGGTCTTaGACTCGGTCAGGCATCGTCAAGCCTGCCCAGGCC +
Preference number: 3 (lower is better)
Translates to: VIALGIATGCGS*TRSGIVKPAQA
Trigger: GGCCTGGGCAGGCTTGACGATGCCTGACCGAGTTCAAGACCCACACCCTGTAGCAATACCAAGTGCTATTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR GCA 72 bp GCCATGCCGTATGACCCCAGACTGACCTCCCTAACCTaGTGGGGTCTTAACTTGCTGATCCTCAAGCCTGTT +
Preference number: 3 (lower is better)
Translates to: AMPYDPRLTSLT*WGLNLLILKPV
Trigger: AACAGGCTTGAGGATCAGCAAGTTAAGACCCCAGCAGGTTAGGGAGGTCAGTCTGGGGTCATACGGCATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR GCA 72 bp AGACATGACCACGCATGGCAGTGTCGGTGGAGAGTTTaGGTTTTACACCCAGCGATGCTTGGGGATGGCAGA +
Preference number: 3 (lower is better)
Translates to: RHDHAWQCRWRV*VLHPAMLGDGR
Trigger: TCTGCCATCCCCAAGCATCGCTGGGTGTAAAACGCAAACTCTCCACCGACACTGCCATGCGTGGTCATGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR CCA 72 bp GTGGGTGGCAGTGAAGAGGCTCTTTGGAGATGCATGTaGCCAGGGGAGACAATGGGGACATCTGTGCTTGTT +
Preference number: 3 (lower is better)
Translates to: VGGSEEALWRCM*PGETMGTSVLV
Trigger: AACAAGCACAGATGTCCCCATTGTCTCCCCTGGCCACATGCATCTCCAAAGAGCCTCTTCACTGCCACCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR CCA 72 bp GAGGTGGAGAGTAGAGGGGTTGGCAGTGTGCGGGTTTaGCAAAGCATCACGACCATCTTTGGGGTTCAAGTT +
Preference number: 3 (lower is better)
Translates to: EVESRGVGSVRV*QSITTIFGVQV
Trigger: AACTTGAACCCCAAAGATGGTCGTGATGCTTTGCCAAACCCGCACACTGCCAACCCCTCTACTCTCCACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR CCA 72 bp TGGTCCTCAGGCCTGCAGACTTCATTGCACAGAGCATaGCAGACAGTAGATCTTGGCTGCGTTGTTCTGCCT +
Preference number: 3 (lower is better)
Translates to: WSSGLQTSLHRA*QTVDLGCVVLP
Trigger: AGGCAGAACAACGCAGCCAAGATCTACTGTCTGCCATGCTCTGTGCAATGAAGTCTGCAGGCCTGAGGACCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR CCA 72 bp AAGGCATCAAGACATGACCACGCATGGCAGTGTCGGTaGAGAGTTTGCGTTTTACACCCAGCGATGCTTGGG +
Preference number: 3 (lower is better)
Translates to: KASRHDHAWQCR*RVCVLHPAMLG
Trigger: CCCAAGCATCGCTGGGTGTAAAACGCAAACTCTCCACCGACACTGCCATGCGTGGTCATGTCTTGATGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR CCA 72 bp ACTGAGCCCCTGAAGGCATCAAGACATGACCACGCATaGCAGTGTCGGTGGAGAGTTTGCGTTTTACACCCA +
Preference number: 3 (lower is better)
Translates to: TEPLKASRHDHA*QCRWRVCVLHP
Trigger: TGGGTGTAAAACGCAAACTCTCCACCGACACTGCCATGCGTGGTCATGTCTTGATGCCTTCAGGGGCTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR-3UTR CAA 90 bp CCTCAAGGGCTTATCTGGAAAGAGGTTGGCAGGAAAGGAATGCGTCTTCAGGACACCCACTGGAGTAACTaGGCCTCAGCTTCCTCTGAC +
Preference number: 3 (lower is better)
Translates to: PQGLIWKEVGRKGMRLQDTHWSN*ASASSD
Trigger: GTCAGAGGAAGCTGAGGCCAAGTTACTCCAGTGGGT...GTCCTGAAGACGCATTCCTTTCCTGCCAACCTCTTTCCAGATAAGCCCTTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR-3UTR CAA 90 bp AGTGATTCCAGGAAACAGGAACGTGACCGTGGAGGGATGGATTATGGTGGGAACACCCACTGGAGTAACTaGGCCTCAGCTTCCTCTGAC +
Preference number: 3 (lower is better)
Translates to: SDSRKQERDRGGMDYGGNTHWSN*ASASSD
Trigger: GTCAGAGGAAGCTGAGGCCAAGTTACTCCAGTGGGT...GTTCCCACCATAATCCATCCCTCCACGGTCACGTTCCTGTTTCCTGGAATCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
3UTR TCA 72 bp CTGTCAGTGCCTTGCTCCACCTTGACCCAAATGTTCTaGATTGCAATACTCTGGGAGATGTGGGTGGGGGCT +
Preference number: 3 (lower is better)
Translates to: LSVPCSTLTQMF*IAILWEMWVGA
Trigger: AGCCCCCACCCACATCTCCCAGAGTATTGCAATTCAGAACATTTGGGTCAAGGTGGAGCAAGGCACTGACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR TCA 72 bp ATGAGTACAACTGCAAACAGCACTGTACACATGTGGTaGGCCAGGAGGCTGGGACGGAGGTTAGGCCAATGT +
Preference number: 3 (lower is better)
Translates to: MSTTANSTVHMW*ARRLGRRLGQC
Trigger: ACATTGGCCTAACCTCCGTCCCAGCCTCCTGGCTCACCACATGTGTACAGTGCTGTTTGCAGTTGTACTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR GCA 72 bp GGAAGAAGTCACAGTAGACAGAGCAGCCAGATGCCGTaGGTAGACCATGGGACAGTGATTAGTGACACATGC +
Preference number: 3 (lower is better)
Translates to: GRSHSRQSSQMP*VDHGTVISDTC
Trigger: GCATGTGTCACTAATCACTGTCCCATGGTCTACGCACGGCATCTGGCTGCTCTGTCTACTGTGACTTCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR GCA 72 bp GGAAAGGAATGCGTCTTCAGGACTTGGCAGTGTTTGTaGAGAGCTCTGAGGAAGGACAGCAGTACATGGTCC +
Preference number: 3 (lower is better)
Translates to: GKECVFRTWQCL*RALRKDSSTWS
Trigger: GGACCATGTACTGCTGTCCTTCCTCAGAGCTCTGCACAAACACTGCCAAGTCCTGAAGACGCATTCCTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR CCA 72 bp TTAGGTCAGGCACAAAATCTCAGAGGAGGCTCAGGATaGGCCTCTGGGCTCCCTAGATTGTCTTTCCAGAGA +
Preference number: 3 (lower is better)
Translates to: LGQAQNLRGGSG*ASGLPRLSFQR
Trigger: TCTCTGGAAAGACAATCTAGGGAGCCCAGAGGCCCATCCTGAGCCTCCTCTGAGATTTTGTGCCTGACCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR CCA 72 bp TGTTTGTGCAGAGCTCTGAGGAAGGACAGCAGTACATaGTCCTCAGGCCTGCAGACTTCATTGCACAGAGCA +
Preference number: 3 (lower is better)
Translates to: CLCRALRKDSST*SSGLQTSLHRA
Trigger: TGCTCTGTGCAATGAAGTCTGCAGGCCTGAGGACCATGTACTGCTGTCCTTCCTCAGAGCTCTGCACAAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR-3UTR CAA 90 bp GTGTGCGGGTTTGGCAAAGCATCACGACCATCTTTGGGGTTCAAGTTCATTGACGGACATCTGTGCTTGTaGCACCCAAGCTACGCTAGT +
Preference number: 3 (lower is better)
Translates to: VCGFGKASRPSLGFKFIDGHLCL*HPSYAS
Trigger: ACTAGCGTAGCTTGGGTGCAACAAGCACAGATGTCC...GTCAATGAACTTGAACCCCAAAGATGGTCGTGATGCTTTGCCAAACCCGCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR-3UTR CAA 90 bp TTGGGAATCCCAGTTCATAGCACCAGTGATTCCAGGAAACAGGAACGTGACCGTCTTCTGCAGAGCTCTTaGGGTAGTAAGCAAGAGCCA +
Preference number: 3 (lower is better)
Translates to: LGIPVHSTSDSRKQERDRLLQSS*GSKQEP
Trigger: TGGCTCTTGCTTACTACCCAAAGAGCTCTGCAGAAG...ACGGTCACGTTCCTGTTTCCTGGAATCACTGGTGCTATGAACTGGGATTCCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
3UTR GCA 72 bp GGGATGGCAGAGAGATGGATGGATAATGAGTACAACTaGAAACAGCACTGTACACATGTGGTGAGCCAGGAG +
Preference number: 3 (lower is better)
Translates to: GMAERWMDNEYN*KQHCTHVVSQE
Trigger: CTCCTGGCTCACCACATGTGTACAGTGCTGTTTGCAGTTGTACTCATTATCCATCCATCTCTCTGCCATCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR CCA 72 bp ATGTTTATGGCATGTTCTCTGTCGTGTGTGTGTGTGTaGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG +
Preference number: 3 (lower is better)
Translates to: MFMACSLSCVCV*GCVCVCVCVCV
Trigger: CACACACACACACACACACACACACACACACCCCCACACACACACACACGACAGAGAACATGCCATAAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR CCA 72 bp TCGGTGGAGAGTTTGCGTTTTACACCCAGCGATGCTTaGGGATGGCAGAGAGATGGATGGATAATGAGTACA +
Preference number: 3 (lower is better)
Translates to: SVESLRFTPSDA*GWQRDGWIMST
Trigger: TGTACTCATTATCCATCCATCTCTCTGCCATCCCCAAGCATCGCTGGGTGTAAAACGCAAACTCTCCACCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR-3UTR CAA 90 bp TTGGGGATGGCAGAGAGATGGATGGATAATGAGTACAACTGCAAACAGCACTGTCCTTTAACATCTTGGTaGGAGCGGCCCTTCTGCAGA +
Preference number: 3 (lower is better)
Translates to: LGMAERWMDNEYNCKQHCPLTSW*ERPFCR
Trigger: TCTGCAGAAGGGCCGCTCCAACCAAGATGTTAAAGG...ACAGTGCTGTTTGCAGTTGTACTCATTATCCATCCATCTCTCTGCCATCCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR-3UTR CAA 90 bp CCTCAAGGGCTTATCTGGAAAGAGGTTGGCAGGAAAGGAATGCGTCTTCAGGACTGGGGTTCAAGTTCATaGACATGTGATCTACTAGGC +
Preference number: 3 (lower is better)
Translates to: PQGLIWKEVGRKGMRLQDWGSSS*TCDLLG
Trigger: GCCTAGTAGATCACATGTCAATGAACTTGAACCCCA...GTCCTGAAGACGCATTCCTTTCCTGCCAACCTCTTTCCAGATAAGCCCTTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR CCA 72 bp CAGTGTGCGGGTTTGGCAAAGCATCACGACCATCTTTaGGGTTCAAGTTCATTGACATGTGATCTACTAGGC +
Preference number: 3 (lower is better)
Translates to: QCAGLAKHHDHL*GSSSLTCDLLG
Trigger: GCCTAGTAGATCACATGTCAATGAACTTGAACCCCAAAGATGGTCGTGATGCTTTGCCAAACCCGCACACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR CCA 72 bp GACTTCATTGCACAGAGCATGGCAGACAGTAGATCTTaGCTGCGTTGTTCTGCCTACTTTGAAGGAGGCATA +
Preference number: 3 (lower is better)
Translates to: DFIAQSMADSRS*LRCSAYFEGGI
Trigger: TATGCCTCCTTCAAAGTAGGCAGAACAACGCAGCCAAGATCTACTGTCTGCCATGCTCTGTGCAATGAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR CCA 72 bp GTGTTCACTGTGCAAAGTAAGGAAGCCAGTCAACACTaGACGATGTTTAGAAAACATCGCTGTCCCCCTCCA +
Preference number: 3 (lower is better)
Translates to: VFTVQSKEASQH*TMFRKHRCPPP
Trigger: TGGAGGGGGACAGCGATGTTTTCTAAACATCGTCCAGTGTTGACTGGCTTCCTTACTTTGCACAGTGAACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR CCA 72 bp GAGAGTTTGCGTTTTACACCCAGCGATGCTTGGGGATaGCAGAGAGATGGATGGATAATGAGTACAACTGCA +
Preference number: 3 (lower is better)
Translates to: ESLRFTPSDAWG*QRDGWIMSTTA
Trigger: TGCAGTTGTACTCATTATCCATCCATCTCTCTGCCATCCCCAAGCATCGCTGGGTGTAAAACGCAAACTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR-3UTR CAA 90 bp TTGGGGATGGCAGAGAGATGGATGGATAATGAGTACAACTGCAAACAGCACTGTGCATCACGACCATCTTaGGGGTTCAAGTTCATTGAC +
Preference number: 3 (lower is better)
Translates to: LGMAERWMDNEYNCKQHCASRPS*GFKFID
Trigger: GTCAATGAACTTGAACCCCAAAGATGGTCGTGATGC...ACAGTGCTGTTTGCAGTTGTACTCATTATCCATCCATCTCTCTGCCATCCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR-3UTR CAA 90 bp AGACATTTAACTTATCCCCAAACATGTGTCTTGATCTTAGTTTCCACCCAGAGAGCCACTGTCAGTGCCTaGCTCCACCTTGACCCAAAT +
Preference number: 3 (lower is better)
Translates to: RHLTYPQTCVLILVSTQRATVSA*LHLDPN
Trigger: ATTTGGGTCAAGGTGGAGCAAGGCACTGACAGTGGC...TCTCTGGGTGGAAACTAAGATCAAGACACATGTTTGGGGATAAGTTAAATGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR GCA 72 bp AAGCACTGGGTTACCCAAGCAACTAAATCACTCAGTTaGATCCAACTTAATTGGACTGACTACATTCAGCTA +
Preference number: 3 (lower is better)
Translates to: KHWVTQATKSLS*IQLNWTDYIQL
Trigger: TAGCTGAATGTAGTCAGTCCAATTAAGTTGGATGCAACTGAGTGATTTAGTTGCTTGGGTAACCCAGTGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR TCA 72 bp GAGAAACTCTTAAAATCAAATCCTACGCACTGTAGTTaGCCTACACAAGTGGCTTCCGCATTTGGACAAAAA +
Preference number: 3 (lower is better)
Translates to: EKLLKSNPTHCS*PTQVASAFGQK
Trigger: TTTTTGTCCAAATGCGGAAGCCACTTGTGTAGGTCAACTACAGTGCGTAGGATTTGATTTTAAGAGTTTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR CCA 72 bp AATCAAATCCTACGCACTGTAGTTGACCTACACAAGTaGCTTCCGCATTTGGACAAAAATCAGTTACTAACA +
Preference number: 3 (lower is better)
Translates to: NQILRTVVDLHK*LPHLDKNQLLT
Trigger: TGTTAGTAACTGATTTTTGTCCAAATGCGGAAGCCACTTGTGTAGGTCAACTACAGTGCGTAGGATTTGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR CCA 72 bp CAAGCAACTAAATCACTCAGTTGCATCCAACTTAATTaGACTGACTACATTCAGCTAAATCTTTCCATTTTC +
Preference number: 3 (lower is better)
Translates to: QATKSLSCIQLN*TDYIQLNLSIF
Trigger: GAAAATGGAAAGATTTAGCTGAATGTAGTCAGTCCAATTAAGTTGGATGCAACTGAGTGATTTAGTTGCTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR TCA 90 bp GAGTCGCCAGTCCCAGGGACCCCTGCCTCCGGGAGACCCACTGGAGTAACTTGGAGAGGGACCGCGCAGTaGGCCGCACAGGGCGCCCTC +
Preference number: 4 (lower is better)
Translates to: ESPVPGTPASGRPTGVTWRGTAQ*AAQGAL
Trigger: GAGGGCGCCCTGTGCGGCTCACTGCGCGGTCCCTCT...CCAAGTTACTCCAGTGGGTCTCCCGGAGGCAGGGGTCCCTGGGACTGGCGACTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CCA 90 bp GGGGCCCTTGAGTCGCCAGTCCCAGGGACCCCTGCCTCCGGGAGACCCACTGGAGCGCAGGGGGAGGCTTaGTGGGTGGCACAGTTGGGT +
Preference number: 4 (lower is better)
Translates to: GALESPVPGTPASGRPTGAQGEA*WVAQLG
Trigger: ACCCAACTGTGCCACCCACCAAGCCTCCCCCTGCGC...TCCAGTGGGTCTCCCGGAGGCAGGGGTCCCTGGGACTGGCGACTCAAGGGCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR TCA 90 bp GTCCCAGGGACCCCTGCCTCCGGGAGACCCACTGGAGTAACTTGGCCTCAGCTTAGAGGGACCGCGCAGTaGGCCGCACAGGGCGCCCTC +
Preference number: 4 (lower is better)
Translates to: VPGTPASGRPTGVTWPQLRGTAQ*AAQGAL
Trigger: GAGGGCGCCCTGTGCGGCTCACTGCGCGGTCCCTCT...AAGCTGAGGCCAAGTTACTCCAGTGGGTCTCCCGGAGGCAGGGGTCCCTGGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR GCA 90 bp GTCCCAGGGACCCCTGCCTCCGGGAGACCCACTGGAGTAACTTGGCCTCAGCTTGGGAGCAAGGGCTCCTaGCCCCCACGCTCCCCCTCC +
Preference number: 4 (lower is better)
Translates to: VPGTPASGRPTGVTWPQLGSKGS*PPRSPS
Trigger: GGAGGGGGAGCGTGGGGGGCAGGAGCCCTTGCTCCC...AAGCTGAGGCCAAGTTACTCCAGTGGGTCTCCCGGAGGCAGGGGTCCCTGGGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CCA 90 bp GGGGCCCTTGAGTCGCCAGTCCCAGGGACCCCTGCCTCCGGGAGACCCACTGGAGTCTGGCACCTTGGCTaGCACTCCTGGCAGAAGGGG +
Preference number: 4 (lower is better)
Translates to: GALESPVPGTPASGRPTGVWHLG*HSWQKG
Trigger: CCCCTTCTGCCAGGAGTGCCAGCCAAGGTGCCAGAC...TCCAGTGGGTCTCCCGGAGGCAGGGGTCCCTGGGACTGGCGACTCAAGGGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR TCA 90 bp GGGGCCCTTGAGTCGCCAGTCCCAGGGACCCCTGCCTCCGGGAGACCCACTGGAGTGGGAGAGCACCACTaGATAGGTCCTGGGGCCCTT +
Preference number: 4 (lower is better)
Translates to: GALESPVPGTPASGRPTGVGEHH*IGPGAL
Trigger: AAGGGCCCCAGGACCTATTCAGTGGTGCTCTCCCAC...TCCAGTGGGTCTCCCGGAGGCAGGGGTCCCTGGGACTGGCGACTCAAGGGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR GCA 90 bp GGGGCCCTTGAGTCGCCAGTCCCAGGGACCCCTGCCTCCGGGAGACCCACTGGAATGGCCTCATCCAGGTaGCCGAGGGCATTTCCGGGA +
Preference number: 4 (lower is better)
Translates to: GALESPVPGTPASGRPTGMASSR*PRAFPG
Trigger: TCCCGGAAATGCCCTCGGGCACCTGGATGAGGCCAT...TCCAGTGGGTCTCCCGGAGGCAGGGGTCCCTGGGACTGGCGACTCAAGGGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR GCA 90 bp GGGGCCCTTGAGTCGCCAGTCCCAGGGACCCCTGCCTCCGGGAGACCCACTGGATCCCGCCCCCTCTTCTaGACCCACTTCTTCCACGTG +
Preference number: 4 (lower is better)
Translates to: GALESPVPGTPASGRPTGSRPLF*THFFHV
Trigger: CACGTGGAAGAAGTGGGTGCAGAAGAGGGGGCGGGA...TCCAGTGGGTCTCCCGGAGGCAGGGGTCCCTGGGACTGGCGACTCAAGGGCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR GCA 90 bp GAGTCGCCAGTCCCAGGGACCCCTGCCTCCGGGAGACCCACTGGAGTAACTTGGATCGGGTGGTGCGGCTaGTCCCGCCCCCTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: ESPVPGTPASGRPTGVTWIGWCG*SRPLFC
Trigger: GCAGAAGAGGGGGCGGGAGCAGCCGCACCACCCGAT...CCAAGTTACTCCAGTGGGTCTCCCGGAGGCAGGGGTCCCTGGGACTGGCGACTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR GCA 90 bp GGGGCCCTTGAGTCGCCAGTCCCAGGGACCCCTGCCTCCGGGAGACCCACTGGAAGGCTAAGGTGGGTCTaGTCCGTCCAGGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: GALESPVPGTPASGRPTGRLRWV*SVQVPL
Trigger: CAGTGGCACCTGGACGGAGCAGACCCACCTTAGCCT...TCCAGTGGGTCTCCCGGAGGCAGGGGTCCCTGGGACTGGCGACTCAAGGGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528897.1
CDS-3UTR CCA 90 bp GGGGCCCTTGAGTCGCCAGTCCCAGGGACCCCTGCCTCCGGGAGACCCACTGGAAGGGGTCTGGCACCTTaGCTGGCACTCCTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: GALESPVPGTPASGRPTGRGLAP*LALLAE
Trigger: TTCTGCCAGGAGTGCCAGCCAAGGTGCCAGACCCCT...TCCAGTGGGTCTCCCGGAGGCAGGGGTCCCTGGGACTGGCGACTCAAGGGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CCA 90 bp GGGGCCCTTGAGTCGCCAGTCCCAGGGACCCCTGCCTCCGGGAGACCCACTGGACCACACAGGCTAAGGTaGGTCTGCTCCGTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: GALESPVPGTPASGRPTGPHRLR*VCSVQV
Trigger: CACCTGGACGGAGCAGACCCACCTTAGCCTGTGTGG...TCCAGTGGGTCTCCCGGAGGCAGGGGTCCCTGGGACTGGCGACTCAAGGGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528897.1
CDS-3UTR TCA 90 bp GAGTCGCCAGTCCCAGGGACCCCTGCCTCCGGGAGACCCACTGGAGTAACTTGGCGCCACGCAGGCGCATaGGCTGTCTGGCCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: ESPVPGTPASGRPTGVTWRHAGA*AVWPVA
Trigger: AGCAACTGGCCAGACAGCTCATGCGCCTGCGTGGCG...CCAAGTTACTCCAGTGGGTCTCCCGGAGGCAGGGGTCCCTGGGACTGGCGACTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR GCA 90 bp GTCCCAGGGACCCCTGCCTCCGGGAGACCCACTGGAGTAACTTGGCCTCAGCTTAGTCCCAGGGACCCCTaGCTCCGGGAGACCCACTGG +
Preference number: 4 (lower is better)
Translates to: VPGTPASGRPTGVTWPQLSPRDP*LRETHW
Trigger: CCAGTGGGTCTCCCGGAGGCAGGGGTCCCTGGGACT...AAGCTGAGGCCAAGTTACTCCAGTGGGTCTCCCGGAGGCAGGGGTCCCTGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR TCA 90 bp GAGTCGCCAGTCCCAGGGACCCCTGCCTCCGGGAGACCCACTGGAGTAACTTGGGCCTCAGTTTCTCGGTaGGGGCCTTCAGGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: ESPVPGTPASGRPTGVTWASVSR*GPSGSG
Trigger: TCCGGAGCCTGAAGGCCCTCACCGAGAAACTGAGGC...CCAAGTTACTCCAGTGGGTCTCCCGGAGGCAGGGGTCCCTGGGACTGGCGACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR TCA 90 bp GTCCCAGGGACCCCTGCCTCCGGGAGACCCACTGGAGTAACTTGGCCTCAGCTTCGCCACGCAGGCGCATaGGCTGTCTGGCCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: VPGTPASGRPTGVTWPQLRHAGA*AVWPVA
Trigger: AGCAACTGGCCAGACAGCTCATGCGCCTGCGTGGCG...AAGCTGAGGCCAAGTTACTCCAGTGGGTCTCCCGGAGGCAGGGGTCCCTGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR GCA 90 bp GAGTCGCCAGTCCCAGGGACCCCTGCCTCCGGGAGACCCACTGGAGTAACTTGGCCAGGTAGGAGGGCCTaGGGGTCTCCAGCCTCAGTT +
Preference number: 4 (lower is better)
Translates to: ESPVPGTPASGRPTGVTWPGRRA*GSPASV
Trigger: AACTGAGGCTGGAGACCCGCAGGCCCTCCTACCTGG...CCAAGTTACTCCAGTGGGTCTCCCGGAGGCAGGGGTCCCTGGGACTGGCGACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR GCA 90 bp GTCCCAGGGACCCCTGCCTCCGGGAGACCCACTGGAGTAACTTGGCCTCAGCTTTCTGCTCCGTCCAGGTaGCACTGCCCCCTCACCACC +
Preference number: 4 (lower is better)
Translates to: VPGTPASGRPTGVTWPQLSAPSR*HCPLTT
Trigger: GGTGGTGAGGGGGCAGTGGCACCTGGACGGAGCAGA...AAGCTGAGGCCAAGTTACTCCAGTGGGTCTCCCGGAGGCAGGGGTCCCTGGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528897.1
CDS-3UTR CCA 90 bp GAGTCGCCAGTCCCAGGGACCCCTGCCTCCGGGAGACCCACTGGAGTAACTTGGCACAGGGCGCCCTCCTaGAGGCTCGGGTCTATGATC +
Preference number: 4 (lower is better)
Translates to: ESPVPGTPASGRPTGVTWHRAPS*RLGSMI
Trigger: GATCATAGACCCGAGCCTCCAGGAGGGCGCCCTGTG...CCAAGTTACTCCAGTGGGTCTCCCGGAGGCAGGGGTCCCTGGGACTGGCGACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CCA 90 bp GTCCCAGGGACCCCTGCCTCCGGGAGACCCACTGGAGTAACTTGGCCTCAGCTTGGGAGGCTTGGTGGGTaGCACAGTTGGGTCCCGCTC +
Preference number: 4 (lower is better)
Translates to: VPGTPASGRPTGVTWPQLGRLGG*HSWVPL
Trigger: GAGCGGGACCCAACTGTGCCACCCACCAAGCCTCCC...AAGCTGAGGCCAAGTTACTCCAGTGGGTCTCCCGGAGGCAGGGGTCCCTGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CCA 90 bp TCTGGCCGAGGGACCCCTGCCATGCCGTATGACCCCAGACTGACCTCCCTAACCCAGGGGGAGGCTTGGTaGGTGGCACAGTTGGGTCCC +
Preference number: 4 (lower is better)
Translates to: SGRGTPAMPYDPRLTSLTQGEAW*VAQLGP
Trigger: GGGACCCAACTGTGCCACCCACCAAGCCTCCCCCTG...GGTTAGGGAGGTCAGTCTGGGGTCATACGGCATGGCAGGGGTCCCTCGGCCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CCA 90 bp GTCCCAGGGACCCCTGCCTCCGGGAGACCCACTGGAGTAACTTGGCCTCAGCTTGCGCAGGGGGAGGCTTaGTGGGTGGCACAGTTGGGT +
Preference number: 4 (lower is better)
Translates to: VPGTPASGRPTGVTWPQLAQGEA*WVAQLG
Trigger: ACCCAACTGTGCCACCCACCAAGCCTCCCCCTGCGC...AAGCTGAGGCCAAGTTACTCCAGTGGGTCTCCCGGAGGCAGGGGTCCCTGGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CCA 90 bp GGGGCCCTTGAGTCGCCAGTCCCAGGGACCCCTGCCTCCGGGAGACCCACTGGAGTGACCGTGGAGGGATaGATTATGGTGGGAACCCAG +
Preference number: 4 (lower is better)
Translates to: GALESPVPGTPASGRPTGVTVEG*IMVGTQ
Trigger: CTGGGTTCCCACCATAATCCATCCCTCCACGGTCAC...TCCAGTGGGTCTCCCGGAGGCAGGGGTCCCTGGGACTGGCGACTCAAGGGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CCA 90 bp GAGTCGCCAGTCCCAGGGACCCCTGCCTCCGGGAGACCCACTGGAGTAACTTGGGGAAGGGCAGGTGGCTaGAGACCCGAGATCTCCCAG +
Preference number: 4 (lower is better)
Translates to: ESPVPGTPASGRPTGVTWGRAGG*RPEISQ
Trigger: CTGGGAGATCTCGGGTCTCCAGCCACCTGCCCTTCC...CCAAGTTACTCCAGTGGGTCTCCCGGAGGCAGGGGTCCCTGGGACTGGCGACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528897.1
CDS-3UTR GCA 90 bp GAGTCGCCAGTCCCAGGGACCCCTGCCTCCGGGAGACCCACTGGAGTAACTTGGAGCTGTCTGGCCAGTTaGTGGTCCTGCAGCCGCATC +
Preference number: 4 (lower is better)
Translates to: ESPVPGTPASGRPTGVTWSCLAS*WSCSRI
Trigger: GATGCGGCTGCAGGACCAGCAACTGGCCAGACAGCT...CCAAGTTACTCCAGTGGGTCTCCCGGAGGCAGGGGTCCCTGGGACTGGCGACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CCA 90 bp GAGTCGCCAGTCCCAGGGACCCCTGCCTCCGGGAGACCCACTGGAGTAACTTGGTGTCTGGCCAGTTGCTaGTCCTGCAGCCGCATCTCC +
Preference number: 4 (lower is better)
Translates to: ESPVPGTPASGRPTGVTWCLASC*SCSRIS
Trigger: GGAGATGCGGCTGCAGGACCAGCAACTGGCCAGACA...CCAAGTTACTCCAGTGGGTCTCCCGGAGGCAGGGGTCCCTGGGACTGGCGACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
3UTR CAA 72 bp AGGGACCCCTGCCTCCGGGAGACCCACTGGAGTAACTaGGCCTCAGCTTCCTCTGACACCCCTCCAGCCCAA +
Preference number: 4 (lower is better)
Translates to: RDPCLRETHWSN*ASASSDTPPAQ
Trigger: TTGGGCTGGAGGGGTGTCAGAGGAAGCTGAGGCCAAGTTACTCCAGTGGGTCTCCCGGAGGCAGGGGTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR TCA 90 bp GCGGCCCTTCTGCAGAGCTCTTTGGGTAGTAAGCAAGAGCCAGTCACAGAGACAAGAGGGACCGCGCAGTaGGCCGCACAGGGCGCCCTC +
Preference number: 4 (lower is better)
Translates to: AALLQSSLGSKQEPVTETRGTAQ*AAQGAL
Trigger: GAGGGCGCCCTGTGCGGCTCACTGCGCGGTCCCTCT...TGTCTCTGTGACTGGCTCTTGCTTACTACCCAAAGAGCTCTGCAGAAGGGCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR TCA 90 bp GGGGCCCTTGAGTCGCCAGTCCCAGGGACCCCTGCCTCCGGGAGACCCACTGGAAGAACCTCCGAGAGTTaGTGTTCATCTTGGTCACGC +
Preference number: 4 (lower is better)
Translates to: GALESPVPGTPASGRPTGRTSES*CSSWSR
Trigger: GCGTGACCAAGATGAACATCAACTCTCGGAGGTTCT...TCCAGTGGGTCTCCCGGAGGCAGGGGTCCCTGGGACTGGCGACTCAAGGGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR TCA 90 bp GGGACAGTGATTAGTGACACATGCCCTGTGGGGCCACTGTCAGTGCCTTGCTCCCCCCTCCGCCCAGTCTaGGGGCTCCTCAGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: GTVISDTCPVGPLSVPCSPLRPV*GLLSRE
Trigger: CTCTCTGCTGAGGAGCCCTCAGACTGGGCGGAGGGG...GGAGCAAGGCACTGACAGTGGCCCCACAGGGCATGTGTCACTAATCACTGTCCC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR GCA 90 bp GTCCCAGGGACCCCTGCCTCCGGGAGACCCACTGGAGTAACTTGGCCTCAGCTTTCCCGCCCCCTCTTCTaGACCCACTTCTTCCACGTG +
Preference number: 4 (lower is better)
Translates to: VPGTPASGRPTGVTWPQLSRPLF*THFFHV
Trigger: CACGTGGAAGAAGTGGGTGCAGAAGAGGGGGCGGGA...AAGCTGAGGCCAAGTTACTCCAGTGGGTCTCCCGGAGGCAGGGGTCCCTGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR GCA 90 bp GTCCCAGGGACCCCTGCCTCCGGGAGACCCACTGGAGTAACTTGGCCTCAGCTTGCCAGTTGCTGGTCCTaGAGCCGCATCTCCGTCAGT +
Preference number: 4 (lower is better)
Translates to: VPGTPASGRPTGVTWPQLASCWS*SRISVS
Trigger: ACTGACGGAGATGCGGCTGCAGGACCAGCAACTGGC...AAGCTGAGGCCAAGTTACTCCAGTGGGTCTCCCGGAGGCAGGGGTCCCTGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR GCA 90 bp GTCCCAGGGACCCCTGCCTCCGGGAGACCCACTGGAGTAACTTGGCCTCAGCTTAGCTGTCTGGCCAGTTaGTGGTCCTGCAGCCGCATC +
Preference number: 4 (lower is better)
Translates to: VPGTPASGRPTGVTWPQLSCLAS*WSCSRI
Trigger: GATGCGGCTGCAGGACCAGCAACTGGCCAGACAGCT...AAGCTGAGGCCAAGTTACTCCAGTGGGTCTCCCGGAGGCAGGGGTCCCTGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CCA 90 bp GTCCCAGGGACCCCTGCCTCCGGGAGACCCACTGGAGTAACTTGGCCTCAGCTTTTCTACAGTCTGCCCTaGCAGCCGGACATGCGAGGG +
Preference number: 4 (lower is better)
Translates to: VPGTPASGRPTGVTWPQLFYSLP*QPDMRG
Trigger: CCCTCGCATGTCCGGCTGCCAGGGCAGACTGTAGAA...AAGCTGAGGCCAAGTTACTCCAGTGGGTCTCCCGGAGGCAGGGGTCCCTGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CCA 90 bp CACGTGAGACAGGCACATCTGACATGCCTAATTTCCCCCAAGGCCCTTGCGGGACTCCAAGCTCGCCTGTaGCTCCGCAGCCGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: HVRQAHLTCLISPKALAGLQARL*LRSRPR
Trigger: CCGAGGCCGGCTGCGGAGCCACAGGCGAGCTTGGAG...TCCCGCAAGGGCCTTGGGGGAAATTAGGCATGTCAGATGTGCCTGTCTCACGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284486.9
ENST00000534308.1
CDS-3UTR CCA 90 bp GGAGCGGCCCTTCTGCAGAGCTCTTTGGGTAGTAAGCAAGAGCCAGTCACAGAGCTCCAAGCTCGCCTGTaGCTCCGCAGCCGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: GAALLQSSLGSKQEPVTELQARL*LRSRPR
Trigger: CCGAGGCCGGCTGCGGAGCCACAGGCGAGCTTGGAG...CTCTGTGACTGGCTCTTGCTTACTACCCAAAGAGCTCTGCAGAAGGGCCGCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CCA 90 bp GTCCCAGGGACCCCTGCCTCCGGGAGACCCACTGGAGTAACTTGGCCTCAGCTTAGGGGTCTGGCACCTTaGCTGGCACTCCTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: VPGTPASGRPTGVTWPQLRGLAP*LALLAE
Trigger: TTCTGCCAGGAGTGCCAGCCAAGGTGCCAGACCCCT...AAGCTGAGGCCAAGTTACTCCAGTGGGTCTCCCGGAGGCAGGGGTCCCTGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CCA 90 bp GTCCCAGGGACCCCTGCCTCCGGGAGACCCACTGGAGTAACTTGGCCTCAGCTTCAGTCACAGAGACACTaGCATCCACACCCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: VPGTPASGRPTGVTWPQLQSQRH*HPHPGP
Trigger: GGGCCCTGGGTGTGGATGCCAGTGTCTCTGTGACTG...AAGCTGAGGCCAAGTTACTCCAGTGGGTCTCCCGGAGGCAGGGGTCCCTGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CCA 90 bp GGGGCCCTTGAGTCGCCAGTCCCAGGGACCCCTGCCTCCGGGAGACCCACTGGATCTCCTTTAACATCTTaGTTGGAGCGGCCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: GALESPVPGTPASGRPTGSPLTS*LERPFC
Trigger: GCAGAAGGGCCGCTCCAACCAAGATGTTAAAGGAGA...TCCAGTGGGTCTCCCGGAGGCAGGGGTCCCTGGGACTGGCGACTCAAGGGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CCA 90 bp CCGTGCGTAGACCATGGGACAGTGATTAGTGACACATGCCCTGTGGGGCCACTGGGGAGGCTTGGTGGGTaGCACAGTTGGGTCCCGCTC +
Preference number: 4 (lower is better)
Translates to: PCVDHGTVISDTCPVGPLGRLGG*HSWVPL
Trigger: GAGCGGGACCCAACTGTGCCACCCACCAAGCCTCCC...CAGTGGCCCCACAGGGCATGTGTCACTAATCACTGTCCCATGGTCTACGCACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CCA 90 bp GCGGCCCTTCTGCAGAGCTCTTTGGGTAGTAAGCAAGAGCCAGTCACAGAGACACTCCAAGCTCGCCTGTaGCTCCGCAGCCGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: AALLQSSLGSKQEPVTETLQARL*LRSRPR
Trigger: CCGAGGCCGGCTGCGGAGCCACAGGCGAGCTTGGAG...TGTCTCTGTGACTGGCTCTTGCTTACTACCCAAAGAGCTCTGCAGAAGGGCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CCA 90 bp GGGGCCCTTGAGTCGCCAGTCCCAGGGACCCCTGCCTCCGGGAGACCCACTGGAAGGGATGGATTATGGTaGGAACCCAGGTCTCCTTTA +
Preference number: 4 (lower is better)
Translates to: GALESPVPGTPASGRPTGRDGLW*EPRSPL
Trigger: TAAAGGAGACCTGGGTTCCCACCATAATCCATCCCT...TCCAGTGGGTCTCCCGGAGGCAGGGGTCCCTGGGACTGGCGACTCAAGGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CCA 90 bp GAGTCGCCAGTCCCAGGGACCCCTGCCTCCGGGAGACCCACTGGAGTAACTTGGGTGACCGTGGAGGGATaGATTATGGTGGGAACCCAG +
Preference number: 4 (lower is better)
Translates to: ESPVPGTPASGRPTGVTWVTVEG*IMVGTQ
Trigger: CTGGGTTCCCACCATAATCCATCCCTCCACGGTCAC...CCAAGTTACTCCAGTGGGTCTCCCGGAGGCAGGGGTCCCTGGGACTGGCGACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR TCA 90 bp GAGTCGCCAGTCCCAGGGACCCCTGCCTCCGGGAGACCCACTGGAGTAACTTGGGCTTCATCGATGCTCTaGAAGCCTTCCAGCTTGCCA +
Preference number: 4 (lower is better)
Translates to: ESPVPGTPASGRPTGVTWASSML*KPSSLP
Trigger: TGGCAAGCTGGAAGGCTTTCAGAGCATCGATGAAGC...CCAAGTTACTCCAGTGGGTCTCCCGGAGGCAGGGGTCCCTGGGACTGGCGACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR TCA 90 bp GCGGCCCTTCTGCAGAGCTCTTTGGGTAGTAAGCAAGAGCCAGTCACAGAGACACCCCTCCGCCCAGTCTaGGGGCTCCTCAGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: AALLQSSLGSKQEPVTETPLRPV*GLLSRE
Trigger: CTCTCTGCTGAGGAGCCCTCAGACTGGGCGGAGGGG...TGTCTCTGTGACTGGCTCTTGCTTACTACCCAAAGAGCTCTGCAGAAGGGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR GCA 90 bp ATGACCACGCATGGCAGTGTCGGTGGAGAGTTTGCGTTTTACACCCAGCGATGCATCGGGTGGTGCGGCTaGTCCCGCCCCCTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: MTTHGSVGGEFAFYTQRCIGWCG*SRPLFC
Trigger: GCAGAAGAGGGGGCGGGAGCAGCCGCACCACCCGAT...GCATCGCTGGGTGTAAAACGCAAACTCTCCACCGACACTGCCATGCGTGGTCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR GCA 90 bp AGTGATTCCAGGAAACAGGAACGTGACCGTGGAGGGATGGATTATGGTGGGAACGGGAGCAAGGGCTCCTaGCCCCCACGCTCCCCCTCC +
Preference number: 4 (lower is better)
Translates to: SDSRKQERDRGGMDYGGNGSKGS*PPRSPS
Trigger: GGAGGGGGAGCGTGGGGGGCAGGAGCCCTTGCTCCC...GTTCCCACCATAATCCATCCCTCCACGGTCACGTTCCTGTTTCCTGGAATCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR GCA 90 bp ATGACCACGCATGGCAGTGTCGGTGGAGAGTTTGCGTTTTACACCCAGCGATGCAGTCCCAGGGACCCCTaGCTCCGGGAGACCCACTGG +
Preference number: 4 (lower is better)
Translates to: MTTHGSVGGEFAFYTQRCSPRDP*LRETHW
Trigger: CCAGTGGGTCTCCCGGAGGCAGGGGTCCCTGGGACT...GCATCGCTGGGTGTAAAACGCAAACTCTCCACCGACACTGCCATGCGTGGTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR GCA 90 bp GAGCGGCCCTTCTGCAGAGCTCTTTGGGTAGTAAGCAAGAGCCAGTCACAGAGAAGTCCCAGGGACCCCTaGCTCCGGGAGACCCACTGG +
Preference number: 4 (lower is better)
Translates to: ERPFCRALWVVSKSQSQRSPRDP*LRETHW
Trigger: CCAGTGGGTCTCCCGGAGGCAGGGGTCCCTGGGACT...TCTCTGTGACTGGCTCTTGCTTACTACCCAAAGAGCTCTGCAGAAGGGCCGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR GCA 90 bp GAGTCGCCAGTCCCAGGGACCCCTGCCTCCGGGAGACCCACTGGAGTAACTTGGGTGATTAGTGACACATaGCCTGTGGGGCCACTGTCA +
Preference number: 4 (lower is better)
Translates to: ESPVPGTPASGRPTGVTWVISDT*PVGPLS
Trigger: TGACAGTGGCCCCACAGGGCATGTGTCACTAATCAC...CCAAGTTACTCCAGTGGGTCTCCCGGAGGCAGGGGTCCCTGGGACTGGCGACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CCA 90 bp GGAAACAGGAACGTGACCGTGGAGGGATGGATTATGGTGGGAACCCAGGTCTCCGGTGGGTGGCACAGTTaGGTCCCGCTCTGGGATGGC +
Preference number: 4 (lower is better)
Translates to: GNRNVTVEGWIMVGTQVSGGWHS*VPLWDG
Trigger: GCCATCCCAGAGCGGGACCCAACTGTGCCACCCACC...GGAGACCTGGGTTCCCACCATAATCCATCCCTCCACGGTCACGTTCCTGTTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CCA 90 bp CGTGAGACAGGCACATCTGACATGCCTAATTTCCCCCAAGGCCCTTGCGGGACAGGTGGGTGGCACAGTTaGGTCCCGCTCTGGGATGGC +
Preference number: 4 (lower is better)
Translates to: RETGTSDMPNFPQGPCGTGGWHS*VPLWDG
Trigger: GCCATCCCAGAGCGGGACCCAACTGTGCCACCCACC...TGTCCCGCAAGGGCCTTGGGGGAAATTAGGCATGTCAGATGTGCCTGTCTCACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284486.9
ENST00000534308.1
CDS-3UTR CCA 90 bp CACGTGAGACAGGCACATCTGACATGCCTAATTTCCCCCAAGGCCCTTGCGGGACAGGGGGAGGCTTGGTaGGTGGCACAGTTGGGTCCC +
Preference number: 4 (lower is better)
Translates to: HVRQAHLTCLISPKALAGQGEAW*VAQLGP
Trigger: GGGACCCAACTGTGCCACCCACCAAGCCTCCCCCTG...TCCCGCAAGGGCCTTGGGGGAAATTAGGCATGTCAGATGTGCCTGTCTCACGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000284486.9
ENST00000534308.1
CDS-3UTR CCA 90 bp CCGTGCGTAGACCATGGGACAGTGATTAGTGACACATGCCCTGTGGGGCCACTGTTCAGGCTCCGGAGGTaGTCATCGGGTGGTGCGGCT +
Preference number: 4 (lower is better)
Translates to: PCVDHGTVISDTCPVGPLFRLRR*SSGGAA
Trigger: AGCCGCACCACCCGATGACCACCTCCGGAGCCTGAA...CAGTGGCCCCACAGGGCATGTGTCACTAATCACTGTCCCATGGTCTACGCACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CCA 90 bp CCGTGCGTAGACCATGGGACAGTGATTAGTGACACATGCCCTGTGGGGCCACTGCCCAGGCTGTCACCCTaGGGTGTGGGTGGCAGTGAA +
Preference number: 4 (lower is better)
Translates to: PCVDHGTVISDTCPVGPLPRLSP*GVGGSE
Trigger: TTCACTGCCACCCACACCCCAGGGTGACAGCCTGGG...CAGTGGCCCCACAGGGCATGTGTCACTAATCACTGTCCCATGGTCTACGCACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR TCA 90 bp CGTGAGACAGGCACATCTGACATGCCTAATTTCCCCCAAGGCCCTTGCGGGACAGCCTCAGTTTCTCGGTaGGGGCCTTCAGGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: RETGTSDMPNFPQGPCGTASVSR*GPSGSG
Trigger: TCCGGAGCCTGAAGGCCCTCACCGAGAAACTGAGGC...TGTCCCGCAAGGGCCTTGGGGGAAATTAGGCATGTCAGATGTGCCTGTCTCACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284486.9
ENST00000534308.1
CDS-3UTR TCA 90 bp GTCCCAGGGACCCCTGCCTCCGGGAGACCCACTGGAGTAACTTGGCCTCAGCTTGCTTCATCGATGCTCTaGAAGCCTTCCAGCTTGCCA +
Preference number: 4 (lower is better)
Translates to: VPGTPASGRPTGVTWPQLASSML*KPSSLP
Trigger: TGGCAAGCTGGAAGGCTTTCAGAGCATCGATGAAGC...AAGCTGAGGCCAAGTTACTCCAGTGGGTCTCCCGGAGGCAGGGGTCCCTGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR TCA 90 bp GAGCGGCCCTTCTGCAGAGCTCTTTGGGTAGTAAGCAAGAGCCAGTCACAGAGACGCCACGCAGGCGCATaGGCTGTCTGGCCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: ERPFCRALWVVSKSQSQRRHAGA*AVWPVA
Trigger: AGCAACTGGCCAGACAGCTCATGCGCCTGCGTGGCG...TCTCTGTGACTGGCTCTTGCTTACTACCCAAAGAGCTCTGCAGAAGGGCCGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR TCA 90 bp TCCTTATCTCAGGATTCTACGGGTCTGGCCGAGGGACCCCTGCCATGCCGTATGCGTAGGTGGCATCGTTaGGCATCCTCCTGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: SLSQDSTGLAEGPLPCRMRRWHR*ASSCGG
Trigger: GCCTCCACAGGAGGATGCTCAACGATGCCACCTACG...CATACGGCATGGCAGGGGTCCCTCGGCCAGACCCGTAGAATCCTGAGATAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR TCA 90 bp TCCTTATCTCAGGATTCTACGGGTCTGGCCGAGGGACCCCTGCCATGCCGTATGGTGGGAGAGCACCACTaGATAGGTCCTGGGGCCCTT +
Preference number: 4 (lower is better)
Translates to: SLSQDSTGLAEGPLPCRMVGEHH*IGPGAL
Trigger: AAGGGCCCCAGGACCTATTCAGTGGTGCTCTCCCAC...CATACGGCATGGCAGGGGTCCCTCGGCCAGACCCGTAGAATCCTGAGATAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR GCA 90 bp AAACAGGAACGTGACCGTGGAGGGATGGATTATGGTGGGAACCCAGGTCTCCTTATCGGGTGGTGCGGCTaGTCCCGCCCCCTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: KQERDRGGMDYGGNPGLLIGWCG*SRPLFC
Trigger: GCAGAAGAGGGGGCGGGAGCAGCCGCACCACCCGAT...AAGGAGACCTGGGTTCCCACCATAATCCATCCCTCCACGGTCACGTTCCTGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR GCA 90 bp TTGGGAATCCCAGTTCATAGCACCAGTGATTCCAGGAAACAGGAACGTGACCGTGGGAGCAAGGGCTCCTaGCCCCCACGCTCCCCCTCC +
Preference number: 4 (lower is better)
Translates to: LGIPVHSTSDSRKQERDRGSKGS*PPRSPS
Trigger: GGAGGGGGAGCGTGGGGGGCAGGAGCCCTTGCTCCC...ACGGTCACGTTCCTGTTTCCTGGAATCACTGGTGCTATGAACTGGGATTCCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR GCA 90 bp TCCAGGAAACAGGAACGTGACCGTGGAGGGATGGATTATGGTGGGAACCCAGGTAGGCATCGTCAAGCCTaGCCAGGCCCTCCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: SRKQERDRGGMDYGGNPGRHRQA*PGPPGL
Trigger: GAGGCCTGGAGGGCCTGGGCAGGCTTGACGATGCCT...ACCTGGGTTCCCACCATAATCCATCCCTCCACGGTCACGTTCCTGTTTCCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR GCA 90 bp GGAAACAGGAACGTGACCGTGGAGGGATGGATTATGGTGGGAACCCAGGTCTCCATCAGTCCCGATCCCTaGCCTGCCACTCAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: GNRNVTVEGWIMVGTQVSISPDP*PATQRR
Trigger: CCGCCTCTGAGTGGCAGGGCAGGGATCGGGACTGAT...GGAGACCTGGGTTCCCACCATAATCCATCCCTCCACGGTCACGTTCCTGTTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534308.1
CDS-3UTR CCA 90 bp GCGGCCCTTCTGCAGAGCTCTTTGGGTAGTAAGCAAGAGCCAGTCACAGAGACAGGGAGGCTTGGTGGGTaGCACAGTTGGGTCCCGCTC +
Preference number: 4 (lower is better)
Translates to: AALLQSSLGSKQEPVTETGRLGG*HSWVPL
Trigger: GAGCGGGACCCAACTGTGCCACCCACCAAGCCTCCC...TGTCTCTGTGACTGGCTCTTGCTTACTACCCAAAGAGCTCTGCAGAAGGGCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CCA 90 bp CATGACCACGCATGGCAGTGTCGGTGGAGAGTTTGCGTTTTACACCCAGCGATGGCGCAGGGGGAGGCTTaGTGGGTGGCACAGTTGGGT +
Preference number: 4 (lower is better)
Translates to: HDHAWQCRWRVCVLHPAMAQGEA*WVAQLG
Trigger: ACCCAACTGTGCCACCCACCAAGCCTCCCCCTGCGC...CATCGCTGGGTGTAAAACGCAAACTCTCCACCGACACTGCCATGCGTGGTCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CCA 90 bp GGAGCGGCCCTTCTGCAGAGCTCTTTGGGTAGTAAGCAAGAGCCAGTCACAGAGTTCAGGCTCCGGAGGTaGTCATCGGGTGGTGCGGCT +
Preference number: 4 (lower is better)
Translates to: GAALLQSSLGSKQEPVTEFRLRR*SSGGAA
Trigger: AGCCGCACCACCCGATGACCACCTCCGGAGCCTGAA...CTCTGTGACTGGCTCTTGCTTACTACCCAAAGAGCTCTGCAGAAGGGCCGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CCA 90 bp CACGTGAGACAGGCACATCTGACATGCCTAATTTCCCCCAAGGCCCTTGCGGGAGGAAGGGCAGGTGGCTaGAGACCCTGTGGGAGGGAT +
Preference number: 4 (lower is better)
Translates to: HVRQAHLTCLISPKALAGGRAGG*RPCGRD
Trigger: ATCCCTCCCACAGGGTCTCCAGCCACCTGCCCTTCC...TCCCGCAAGGGCCTTGGGGGAAATTAGGCATGTCAGATGTGCCTGTCTCACGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534308.1
CDS-3UTR TCA 90 bp GTCCCAGGGACCCCTGCCTCCGGGAGACCCACTGGAGTAACTTGGCCTCAGCTTAAGGTCTATCTGTCCTaGACGCACTCGAAGACCAGA +
Preference number: 4 (lower is better)
Translates to: VPGTPASGRPTGVTWPQLKVYLS*THSKTR
Trigger: TCTGGTCTTCGAGTGCGTTCAGGACAGATAGACCTT...AAGCTGAGGCCAAGTTACTCCAGTGGGTCTCCCGGAGGCAGGGGTCCCTGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR TCA 90 bp AGTGATTCCAGGAAACAGGAACGTGACCGTGGAGGGATGGATTATGGTGGGAACCCCCTCCGCCCAGTCTaGGGGCTCCTCAGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: SDSRKQERDRGGMDYGGNPLRPV*GLLSRE
Trigger: CTCTCTGCTGAGGAGCCCTCAGACTGGGCGGAGGGG...GTTCCCACCATAATCCATCCCTCCACGGTCACGTTCCTGTTTCCTGGAATCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR TCA 90 bp CGTGAGACAGGCACATCTGACATGCCTAATTTCCCCCAAGGCCCTTGCGGGACAACCCTGTGGGAGGGATaGGAACCGCATCAGTCCCGA +
Preference number: 4 (lower is better)
Translates to: RETGTSDMPNFPQGPCGTTLWEG*EPHQSR
Trigger: TCGGGACTGATGCGGTTCTCATCCCTCCCACAGGGT...TGTCCCGCAAGGGCCTTGGGGGAAATTAGGCATGTCAGATGTGCCTGTCTCACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534308.1
CDS-3UTR GCA 90 bp GGAGCGGCCCTTCTGCAGAGCTCTTTGGGTAGTAAGCAAGAGCCAGTCACAGAGATGGCCTCATCCAGGTaGCCGAGGGCATTTCCGGGA +
Preference number: 4 (lower is better)
Translates to: GAALLQSSLGSKQEPVTEMASSR*PRAFPG
Trigger: TCCCGGAAATGCCCTCGGGCACCTGGATGAGGCCAT...CTCTGTGACTGGCTCTTGCTTACTACCCAAAGAGCTCTGCAGAAGGGCCGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR GCA 90 bp CACGTGAGACAGGCACATCTGACATGCCTAATTTCCCCCAAGGCCCTTGCGGGATCCCGCCCCCTCTTCTaGACCCACTTCTTCCACGTG +
Preference number: 4 (lower is better)
Translates to: HVRQAHLTCLISPKALAGSRPLF*THFFHV
Trigger: CACGTGGAAGAAGTGGGTGCAGAAGAGGGGGCGGGA...TCCCGCAAGGGCCTTGGGGGAAATTAGGCATGTCAGATGTGCCTGTCTCACGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000284486.9
ENST00000534308.1
CDS-3UTR GCA 90 bp CACGTGAGACAGGCACATCTGACATGCCTAATTTCCCCCAAGGCCCTTGCGGGAGCCAGTTGCTGGTCCTaGAGCCGCATCTCCGTCAGT +
Preference number: 4 (lower is better)
Translates to: HVRQAHLTCLISPKALAGASCWS*SRISVS
Trigger: ACTGACGGAGATGCGGCTGCAGGACCAGCAACTGGC...TCCCGCAAGGGCCTTGGGGGAAATTAGGCATGTCAGATGTGCCTGTCTCACGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284486.9
ENST00000534308.1
CDS-3UTR GCA 90 bp TTGAACTCGGTCAGGCATCGTCAAGCCTGCCCAGGCCCTCCAGGCCTCTTTGATAGCAGCCAGATGCCGTaGGTAGACCATGGGACAGTG +
Preference number: 4 (lower is better)
Translates to: LNSVRHRQACPGPPGLFDSSQMP*VDHGTV
Trigger: CACTGTCCCATGGTCTACGCACGGCATCTGGCTGCT...ATCAAAGAGGCCTGGAGGGCCTGGGCAGGCTTGACGATGCCTGACCGAGTTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR GCA 90 bp AGTGATTCCAGGAAACAGGAACGTGACCGTGGAGGGATGGATTATGGTGGGAACTCCCGATCCCTGCCCTaGCACTCAGAGGCGGGCACG +
Preference number: 4 (lower is better)
Translates to: SDSRKQERDRGGMDYGGNSRSLP*HSEAGT
Trigger: CGTGCCCGCCTCTGAGTGGCAGGGCAGGGATCGGGA...GTTCCCACCATAATCCATCCCTCCACGGTCACGTTCCTGTTTCCTGGAATCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534308.1
CDS-3UTR CCA 90 bp CCTCAAGGGCTTATCTGGAAAGAGGTTGGCAGGAAAGGAATGCGTCTTCAGGACGGAAGGGCAGGTGGCTaGAGACCCTTCCGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: PQGLIWKEVGRKGMRLQDGRAGG*RPFREP
Trigger: GGGCTCCCGGAAGGGTCTCCAGCCACCTGCCCTTCC...GTCCTGAAGACGCATTCCTTTCCTGCCAACCTCTTTCCAGATAAGCCCTTGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CCA 90 bp TTGGGAATCCCAGTTCATAGCACCAGTGATTCCAGGAAACAGGAACGTGACCGTGAGGTGGTCATCGGGTaGTGCGGCTGCTCCCGCCCC +
Preference number: 4 (lower is better)
Translates to: LGIPVHSTSDSRKQERDREVVIG*CGCSRP
Trigger: GGGGCGGGAGCAGCCGCACCACCCGATGACCACCTC...ACGGTCACGTTCCTGTTTCCTGGAATCACTGGTGCTATGAACTGGGATTCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CCA 90 bp GGAGCGGCCCTTCTGCAGAGCTCTTTGGGTAGTAAGCAAGAGCCAGTCACAGAGTGTCTGGCCAGTTGCTaGTCCTGCAGCCGCATCTCC +
Preference number: 4 (lower is better)
Translates to: GAALLQSSLGSKQEPVTECLASC*SCSRIS
Trigger: GGAGATGCGGCTGCAGGACCAGCAACTGGCCAGACA...CTCTGTGACTGGCTCTTGCTTACTACCCAAAGAGCTCTGCAGAAGGGCCGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CCA 90 bp GAGTCGCCAGTCCCAGGGACCCCTGCCTCCGGGAGACCCACTGGAGTAACTTGGAGGGATGGATTATGGTaGGAACCCAGGTCTCCTTTA +
Preference number: 4 (lower is better)
Translates to: ESPVPGTPASGRPTGVTWRDGLW*EPRSPL
Trigger: TAAAGGAGACCTGGGTTCCCACCATAATCCATCCCT...CCAAGTTACTCCAGTGGGTCTCCCGGAGGCAGGGGTCCCTGGGACTGGCGACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CCA 90 bp CGTGAGACAGGCACATCTGACATGCCTAATTTCCCCCAAGGCCCTTGCGGGACAGTCACGATGTGTGGGTaGACACGGGCCCCACTGAGA +
Preference number: 4 (lower is better)
Translates to: RETGTSDMPNFPQGPCGTVTMCG*TRAPLR
Trigger: TCTCAGTGGGGCCCGTGTCCACCCACACATCGTGAC...TGTCCCGCAAGGGCCTTGGGGGAAATTAGGCATGTCAGATGTGCCTGTCTCACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CCA 90 bp GAGCGGCCCTTCTGCAGAGCTCTTTGGGTAGTAAGCAAGAGCCAGTCACAGAGACTCGGGAAGGGCAGGTaGCTGGAGACCCGAGATCTC +
Preference number: 4 (lower is better)
Translates to: ERPFCRALWVVSKSQSQRLGKGR*LETRDL
Trigger: GAGATCTCGGGTCTCCAGCCACCTGCCCTTCCCGAG...TCTCTGTGACTGGCTCTTGCTTACTACCCAAAGAGCTCTGCAGAAGGGCCGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528897.1
CDS-3UTR TCA 90 bp TTGAACTCGGTCAGGCATCGTCAAGCCTGCCCAGGCCCTCCAGGCCTCTTTGATCGATTTTCAGCTTGTTaGTGTCGCCACGCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: LNSVRHRQACPGPPGLFDRFSAC*CRHAGA
Trigger: TGCGCCTGCGTGGCGACATCAACAAGCTGAAAATCG...ATCAAAGAGGCCTGGAGGGCCTGGGCAGGCTTGACGATGCCTGACCGAGTTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR TCA 90 bp GAGCGGCCCTTCTGCAGAGCTCTTTGGGTAGTAAGCAAGAGCCAGTCACAGAGACGTAGGTGGCATCGTTaGGCATCCTCCTGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: ERPFCRALWVVSKSQSQRRRWHR*ASSCGG
Trigger: GCCTCCACAGGAGGATGCTCAACGATGCCACCTACG...TCTCTGTGACTGGCTCTTGCTTACTACCCAAAGAGCTCTGCAGAAGGGCCGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR TCA 90 bp GCGGCCCTTCTGCAGAGCTCTTTGGGTAGTAAGCAAGAGCCAGTCACAGAGACACGTAGGTGGCATCGTTaGGCATCCTCCTGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: AALLQSSLGSKQEPVTETRRWHR*ASSCGG
Trigger: GCCTCCACAGGAGGATGCTCAACGATGCCACCTACG...TGTCTCTGTGACTGGCTCTTGCTTACTACCCAAAGAGCTCTGCAGAAGGGCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR TCA 90 bp GAGCGGCCCTTCTGCAGAGCTCTTTGGGTAGTAAGCAAGAGCCAGTCACAGAGAGTGGGAGAGCACCACTaGATAGGTCCTGGGGCCCTT +
Preference number: 4 (lower is better)
Translates to: ERPFCRALWVVSKSQSQRVGEHH*IGPGAL
Trigger: AAGGGCCCCAGGACCTATTCAGTGGTGCTCTCCCAC...TCTCTGTGACTGGCTCTTGCTTACTACCCAAAGAGCTCTGCAGAAGGGCCGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR GCA 90 bp GGAAACAGGAACGTGACCGTGGAGGGATGGATTATGGTGGGAACCCAGGTCTCCTCTCGGGGCAGCCTGTaGCAAGGTCTATCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: GNRNVTVEGWIMVGTQVSSRGSL*QGLSVL
Trigger: CAGGACAGATAGACCTTGGCACAGGCTGCCCCGAGA...GGAGACCTGGGTTCCCACCATAATCCATCCCTCCACGGTCACGTTCCTGTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR GCA 90 bp CACGTGAGACAGGCACATCTGACATGCCTAATTTCCCCCAAGGCCCTTGCGGGAAGCCTGTGGGTGCCATaGTCCACAGAAGGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: HVRQAHLTCLISPKALAGSLWVP*STEGRN
Trigger: GTTCCTGCCTTCTGTGGAGCATGGCACCCACAGGCT...TCCCGCAAGGGCCTTGGGGGAAATTAGGCATGTCAGATGTGCCTGTCTCACGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284486.9
ENST00000534308.1
CDS-3UTR GCA 90 bp GGAAACAGGAACGTGACCGTGGAGGGATGGATTATGGTGGGAACCCAGGTCTCCCTGGAAGCCTGTGGGTaGCATGCTCCACAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: GNRNVTVEGWIMVGTQVSLEACG*HAPQKA
Trigger: TGCCTTCTGTGGAGCATGGCACCCACAGGCTTCCAG...GGAGACCTGGGTTCCCACCATAATCCATCCCTCCACGGTCACGTTCCTGTTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR GCA 90 bp TCCAGGAAACAGGAACGTGACCGTGGAGGGATGGATTATGGTGGGAACCCAGGTGCCAGTTGCTGGTCCTaGAGCCGCATCTCCGTCAGT +
Preference number: 4 (lower is better)
Translates to: SRKQERDRGGMDYGGNPGASCWS*SRISVS
Trigger: ACTGACGGAGATGCGGCTGCAGGACCAGCAACTGGC...ACCTGGGTTCCCACCATAATCCATCCCTCCACGGTCACGTTCCTGTTTCCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR GCA 90 bp GCGGCCCTTCTGCAGAGCTCTTTGGGTAGTAAGCAAGAGCCAGTCACAGAGACAAGCTGTCTGGCCAGTTaGTGGTCCTGCAGCCGCATC +
Preference number: 4 (lower is better)
Translates to: AALLQSSLGSKQEPVTETSCLAS*WSCSRI
Trigger: GATGCGGCTGCAGGACCAGCAACTGGCCAGACAGCT...TGTCTCTGTGACTGGCTCTTGCTTACTACCCAAAGAGCTCTGCAGAAGGGCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CCA 90 bp CACGTGAGACAGGCACATCTGACATGCCTAATTTCCCCCAAGGCCCTTGCGGGACGTCCTGGAAGCCTGTaGGTGCCATGCTCCACAGAA +
Preference number: 4 (lower is better)
Translates to: HVRQAHLTCLISPKALAGRPGSL*VPCSTE
Trigger: TTCTGTGGAGCATGGCACCCACAGGCTTCCAGGACG...TCCCGCAAGGGCCTTGGGGGAAATTAGGCATGTCAGATGTGCCTGTCTCACGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284486.9
ENST00000534308.1
CDS-3UTR CCA 90 bp CATGACCACGCATGGCAGTGTCGGTGGAGAGTTTGCGTTTTACACCCAGCGATGTTCTACAGTCTGCCCTaGCAGCCGGACATGCGAGGG +
Preference number: 4 (lower is better)
Translates to: HDHAWQCRWRVCVLHPAMFYSLP*QPDMRG
Trigger: CCCTCGCATGTCCGGCTGCCAGGGCAGACTGTAGAA...CATCGCTGGGTGTAAAACGCAAACTCTCCACCGACACTGCCATGCGTGGTCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CCA 90 bp AAACAGGAACGTGACCGTGGAGGGATGGATTATGGTGGGAACCCAGGTCTCCTTGTCTGGCACCTTGGCTaGCACTCCTGGCAGAAGGGG +
Preference number: 4 (lower is better)
Translates to: KQERDRGGMDYGGNPGLLVWHLG*HSWQKG
Trigger: CCCCTTCTGCCAGGAGTGCCAGCCAAGGTGCCAGAC...AAGGAGACCTGGGTTCCCACCATAATCCATCCCTCCACGGTCACGTTCCTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CCA 90 bp GGAGCGGCCCTTCTGCAGAGCTCTTTGGGTAGTAAGCAAGAGCCAGTCACAGAGCTCCGGGAGACCCACTaGAGTAACTTGGCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: GAALLQSSLGSKQEPVTELRETH*SNLASA
Trigger: AGCTGAGGCCAAGTTACTCCAGTGGGTCTCCCGGAG...CTCTGTGACTGGCTCTTGCTTACTACCCAAAGAGCTCTGCAGAAGGGCCGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CCA 90 bp GGAAAATGCTTTCAGGACCTGCCTGGTTCAGTCACCAGTGGTCTCCCAGGCTGTCAGTCACAGAGACACTaGCATCCACACCCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: GKCFQDLPGSVTSGLPGCQSQRH*HPHPGP
Trigger: GGGCCCTGGGTGTGGATGCCAGTGTCTCTGTGACTG...ACAGCCTGGGAGACCACTGGTGACTGAACCAGGCAGGTCCTGAAAGCATTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CCA 90 bp GTCCCAGGGACCCCTGCCTCCGGGAGACCCACTGGAGTAACTTGGCCTCAGCTTTTCTGCAGAGCTCTTTaGGTAGTAAGCAAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: VPGTPASGRPTGVTWPQLFCRAL*VVSKSQ
Trigger: CTGGCTCTTGCTTACTACCCAAAGAGCTCTGCAGAA...AAGCTGAGGCCAAGTTACTCCAGTGGGTCTCCCGGAGGCAGGGGTCCCTGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
3UTR CAA 72 bp GGCATCGTCAAGCCTGCCCAGGCCCTCCAGGCCTCTTaGATAGCTACTGAGCCCCTGAAGGCATCAAGACAT +
Preference number: 4 (lower is better)
Translates to: GIVKPAQALQAS*IATEPLKASRH
Trigger: ATGTCTTGATGCCTTCAGGGGCTCAGTAGCTATCAAAGAGGCCTGGAGGGCCTGGGCAGGCTTGACGATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR TCA 90 bp TTGAACTCGGTCAGGCATCGTCAAGCCTGCCCAGGCCCTCCAGGCCTCTTTGATCAGGAAACAGGAACGTaGCCGTGGAGGGATGGATTA +
Preference number: 4 (lower is better)
Translates to: LNSVRHRQACPGPPGLFDQETGT*PWRDGL
Trigger: TAATCCATCCCTCCACGGTCACGTTCCTGTTTCCTG...ATCAAAGAGGCCTGGAGGGCCTGGGCAGGCTTGACGATGCCTGACCGAGTTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR TCA 90 bp AGTGATTCCAGGAAACAGGAACGTGACCGTGGAGGGATGGATTATGGTGGGAACCCCTGCCATGCCGTATaGCCCCAGACTGACCTCCCT +
Preference number: 4 (lower is better)
Translates to: SDSRKQERDRGGMDYGGNPCHAV*PQTDLP
Trigger: AGGGAGGTCAGTCTGGGGTCATACGGCATGGCAGGG...GTTCCCACCATAATCCATCCCTCCACGGTCACGTTCCTGTTTCCTGGAATCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR GCA 90 bp GCGGCCCTTCTGCAGAGCTCTTTGGGTAGTAAGCAAGAGCCAGTCACAGAGACAAGCCTGTGGGTGCCATaGTCCACAGAAGGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: AALLQSSLGSKQEPVTETSLWVP*STEGRN
Trigger: GTTCCTGCCTTCTGTGGAGCATGGCACCCACAGGCT...TGTCTCTGTGACTGGCTCTTGCTTACTACCCAAAGAGCTCTGCAGAAGGGCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR GCA 90 bp GCGGCCCTTCTGCAGAGCTCTTTGGGTAGTAAGCAAGAGCCAGTCACAGAGACACTGGAAGCCTGTGGGTaGCATGCTCCACAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: AALLQSSLGSKQEPVTETLEACG*HAPQKA
Trigger: TGCCTTCTGTGGAGCATGGCACCCACAGGCTTCCAG...TGTCTCTGTGACTGGCTCTTGCTTACTACCCAAAGAGCTCTGCAGAAGGGCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR GCA 90 bp AGTGATTCCAGGAAACAGGAACGTGACCGTGGAGGGATGGATTATGGTGGGAACCCAGGTAGGAGGGCCTaGGGGTCTCCAGCCTCAGTT +
Preference number: 4 (lower is better)
Translates to: SDSRKQERDRGGMDYGGNPGRRA*GSPASV
Trigger: AACTGAGGCTGGAGACCCGCAGGCCCTCCTACCTGG...GTTCCCACCATAATCCATCCCTCCACGGTCACGTTCCTGTTTCCTGGAATCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR GCA 90 bp GTCCCAGGGACCCCTGCCTCCGGGAGACCCACTGGAGTAACTTGGCCTCAGCTTACAGTAGATCTTGGCTaGGTTGTTCTGCCTACTTTG +
Preference number: 4 (lower is better)
Translates to: VPGTPASGRPTGVTWPQLTVDLG*VVLPTL
Trigger: CAAAGTAGGCAGAACAACGCAGCCAAGATCTACTGT...AAGCTGAGGCCAAGTTACTCCAGTGGGTCTCCCGGAGGCAGGGGTCCCTGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR GCA 90 bp CCGTGCGTAGACCATGGGACAGTGATTAGTGACACATGCCCTGTGGGGCCACTGGCCTGCAGACTTCATTaGACAGAGCATGGCAGACAG +
Preference number: 4 (lower is better)
Translates to: PCVDHGTVISDTCPVGPLACRLH*TEHGRQ
Trigger: CTGTCTGCCATGCTCTGTGCAATGAAGTCTGCAGGC...CAGTGGCCCCACAGGGCATGTGTCACTAATCACTGTCCCATGGTCTACGCACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR GCA 90 bp TCCTTATCTCAGGATTCTACGGGTCTGGCCGAGGGACCCCTGCCATGCCGTATGCATGGTCCTCAGGCCTaGAGACTTCATTGCACAGAG +
Preference number: 4 (lower is better)
Translates to: SLSQDSTGLAEGPLPCRMHGPQA*RLHCTE
Trigger: CTCTGTGCAATGAAGTCTGCAGGCCTGAGGACCATG...CATACGGCATGGCAGGGGTCCCTCGGCCAGACCCGTAGAATCCTGAGATAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CCA 90 bp GGAAACAGGAACGTGACCGTGGAGGGATGGATTATGGTGGGAACCCAGGTCTCCACTCGAAGACCAGACTaGCAGGAAGAAGGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: GNRNVTVEGWIMVGTQVSTRRPD*QEEGPE
Trigger: CTCTGGGCCTTCTTCCTGCCAGTCTGGTCTTCGAGT...GGAGACCTGGGTTCCCACCATAATCCATCCCTCCACGGTCACGTTCCTGTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CCA 90 bp CGTGAGACAGGCACATCTGACATGCCTAATTTCCCCCAAGGCCCTTGCGGGACAACTCGAAGACCAGACTaGCAGGAAGAAGGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: RETGTSDMPNFPQGPCGTTRRPD*QEEGPE
Trigger: CTCTGGGCCTTCTTCCTGCCAGTCTGGTCTTCGAGT...TGTCCCGCAAGGGCCTTGGGGGAAATTAGGCATGTCAGATGTGCCTGTCTCACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284486.9
ENST00000534308.1
CDS-3UTR CCA 90 bp ATGACCACGCATGGCAGTGTCGGTGGAGAGTTTGCGTTTTACACCCAGCGATGCCGTCCTGGAAGCCTGTaGGTGCCATGCTCCACAGAA +
Preference number: 4 (lower is better)
Translates to: MTTHGSVGGEFAFYTQRCRPGSL*VPCSTE
Trigger: TTCTGTGGAGCATGGCACCCACAGGCTTCCAGGACG...GCATCGCTGGGTGTAAAACGCAAACTCTCCACCGACACTGCCATGCGTGGTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CCA 90 bp CCTCAAGGGCTTATCTGGAAAGAGGTTGGCAGGAAAGGAATGCGTCTTCAGGACCACAGGGCGCCCTCCTaGAGGCTCGGGTCTATGATC +
Preference number: 4 (lower is better)
Translates to: PQGLIWKEVGRKGMRLQDHRAPS*RLGSMI
Trigger: GATCATAGACCCGAGCCTCCAGGAGGGCGCCCTGTG...GTCCTGAAGACGCATTCCTTTCCTGCCAACCTCTTTCCAGATAAGCCCTTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CCA 90 bp TTGGGAATCCCAGTTCATAGCACCAGTGATTCCAGGAAACAGGAACGTGACCGTCAGGGGGAGGCTTGGTaGGTGGCACAGTTGGGTCCC +
Preference number: 4 (lower is better)
Translates to: LGIPVHSTSDSRKQERDRQGEAW*VAQLGP
Trigger: GGGACCCAACTGTGCCACCCACCAAGCCTCCCCCTG...ACGGTCACGTTCCTGTTTCCTGGAATCACTGGTGCTATGAACTGGGATTCCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CCA 90 bp AAACAGGAACGTGACCGTGGAGGGATGGATTATGGTGGGAACCCAGGTCTCCTTTTCTACAGTCTGCCCTaGCAGCCGGACATGCGAGGG +
Preference number: 4 (lower is better)
Translates to: KQERDRGGMDYGGNPGLLFYSLP*QPDMRG
Trigger: CCCTCGCATGTCCGGCTGCCAGGGCAGACTGTAGAA...AAGGAGACCTGGGTTCCCACCATAATCCATCCCTCCACGGTCACGTTCCTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CCA 90 bp CCGTGCGTAGACCATGGGACAGTGATTAGTGACACATGCCCTGTGGGGCCACTGCTTTCAGGACCTGCCTaGTTCAGTCACCAGTGGTCT +
Preference number: 4 (lower is better)
Translates to: PCVDHGTVISDTCPVGPLLSGPA*FSHQWS
Trigger: AGACCACTGGTGACTGAACCAGGCAGGTCCTGAAAG...CAGTGGCCCCACAGGGCATGTGTCACTAATCACTGTCCCATGGTCTACGCACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CCA 90 bp GCGGCCCTTCTGCAGAGCTCTTTGGGTAGTAAGCAAGAGCCAGTCACAGAGACAATACTCTGGGAGATGTaGGTGGGGGCTGAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: AALLQSSLGSKQEPVTETILWEM*VGAEVE
Trigger: CTCCACCTCAGCCCCCACCCACATCTCCCAGAGTAT...TGTCTCTGTGACTGGCTCTTGCTTACTACCCAAAGAGCTCTGCAGAAGGGCCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CCA 90 bp GCGGCCCTTCTGCAGAGCTCTTTGGGTAGTAAGCAAGAGCCAGTCACAGAGACAGTGACACATGCCCTGTaGGGCCACTGTCAGTGCCTT +
Preference number: 4 (lower is better)
Translates to: AALLQSSLGSKQEPVTETVTHAL*GHCQCL
Trigger: AAGGCACTGACAGTGGCCCCACAGGGCATGTGTCAC...TGTCTCTGTGACTGGCTCTTGCTTACTACCCAAAGAGCTCTGCAGAAGGGCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CCA 90 bp GGGACAGTGATTAGTGACACATGCCCTGTGGGGCCACTGTCAGTGCCTTGCTCCAAGGACAGCAGTACATaGTCCTCAGGCCTGCAGACT +
Preference number: 4 (lower is better)
Translates to: GTVISDTCPVGPLSVPCSKDSST*SSGLQT
Trigger: AGTCTGCAGGCCTGAGGACCATGTACTGCTGTCCTT...GGAGCAAGGCACTGACAGTGGCCCCACAGGGCATGTGTCACTAATCACTGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR TCA 90 bp AGTGATTCCAGGAAACAGGAACGTGACCGTGGAGGGATGGATTATGGTGGGAACGGAGGCTCGGGTCTATaGTCCGTCCTGGAAGCCTGT +
Preference number: 4 (lower is better)
Translates to: SDSRKQERDRGGMDYGGNGGSGL*SVLEAC
Trigger: ACAGGCTTCCAGGACGGATCATAGACCCGAGCCTCC...GTTCCCACCATAATCCATCCCTCCACGGTCACGTTCCTGTTTCCTGGAATCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR TCA 90 bp GGAAACAGGAACGTGACCGTGGAGGGATGGATTATGGTGGGAACCCAGGTCTCCCCTACGCACTGTAGTTaGCCTACACAAGTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: GNRNVTVEGWIMVGTQVSPTHCS*PTQVAS
Trigger: GGAAGCCACTTGTGTAGGTCAACTACAGTGCGTAGG...GGAGACCTGGGTTCCCACCATAATCCATCCCTCCACGGTCACGTTCCTGTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR TCA 90 bp TTGAACTCGGTCAGGCATCGTCAAGCCTGCCCAGGCCCTCCAGGCCTCTTTGATCTCTTTGATAGCTACTaGGCCCCTGAAGGCATCAAG +
Preference number: 4 (lower is better)
Translates to: LNSVRHRQACPGPPGLFDLFDSY*APEGIK
Trigger: CTTGATGCCTTCAGGGGCTCAGTAGCTATCAAAGAG...ATCAAAGAGGCCTGGAGGGCCTGGGCAGGCTTGACGATGCCTGACCGAGTTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR GCA 90 bp GGAGCGGCCCTTCTGCAGAGCTCTTTGGGTAGTAAGCAAGAGCCAGTCACAGAGTTGGAGCGGCCCTTCTaGAGAGCTCTTTGGGTAGTA +
Preference number: 4 (lower is better)
Translates to: GAALLQSSLGSKQEPVTELERPF*RALWVV
Trigger: TACTACCCAAAGAGCTCTGCAGAAGGGCCGCTCCAA...CTCTGTGACTGGCTCTTGCTTACTACCCAAAGAGCTCTGCAGAAGGGCCGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR GCA 90 bp AAACAGGAACGTGACCGTGGAGGGATGGATTATGGTGGGAACCCAGGTCTCCTTTTCCCCCAAGGCCCTTaGGGGACAGCCTTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: KQERDRGGMDYGGNPGLLFPQGP*GTAFCK
Trigger: TTTGCAGAAGGCTGTCCCGCAAGGGCCTTGGGGGAA...AAGGAGACCTGGGTTCCCACCATAATCCATCCCTCCACGGTCACGTTCCTGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284486.9
ENST00000534308.1
CDS-3UTR GCA 90 bp CGTGAGACAGGCACATCTGACATGCCTAATTTCCCCCAAGGCCCTTGCGGGACACAGGCACATCTGACATaGCTAATTTCCCCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: RETGTSDMPNFPQGPCGTQAHLT*LISPKA
Trigger: GGCCTTGGGGGAAATTAGGCATGTCAGATGTGCCTG...TGTCCCGCAAGGGCCTTGGGGGAAATTAGGCATGTCAGATGTGCCTGTCTCACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000284486.9
ENST00000534308.1
CDS-3UTR GCA 90 bp TCCTTATCTCAGGATTCTACGGGTCTGGCCGAGGGACCCCTGCCATGCCGTATGAATGCTTTCAGGACCTaGCTGGTTCAGTCACCAGTG +
Preference number: 4 (lower is better)
Translates to: SLSQDSTGLAEGPLPCRMNAFRT*LVQSPV
Trigger: CACTGGTGACTGAACCAGGCAGGTCCTGAAAGCATT...CATACGGCATGGCAGGGGTCCCTCGGCCAGACCCGTAGAATCCTGAGATAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR GCA 90 bp TCCTTATCTCAGGATTCTACGGGTCTGGCCGAGGGACCCCTGCCATGCCGTATGTTGGCAGGAAAGGAATaGGTCTTCAGGACTTGGCAG +
Preference number: 4 (lower is better)
Translates to: SLSQDSTGLAEGPLPCRMLAGKE*VFRTWQ
Trigger: CTGCCAAGTCCTGAAGACGCATTCCTTTCCTGCCAA...CATACGGCATGGCAGGGGTCCCTCGGCCAGACCCGTAGAATCCTGAGATAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CCA 90 bp TCCAGGAAACAGGAACGTGACCGTGGAGGGATGGATTATGGTGGGAACCCAGGTGTCTATGATCCGTCCTaGAAGCCTGTGGGTGCCATG +
Preference number: 4 (lower is better)
Translates to: SRKQERDRGGMDYGGNPGVYDPS*KPVGAM
Trigger: CATGGCACCCACAGGCTTCCAGGACGGATCATAGAC...ACCTGGGTTCCCACCATAATCCATCCCTCCACGGTCACGTTCCTGTTTCCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CCA 90 bp TTGGGAATCCCAGTTCATAGCACCAGTGATTCCAGGAAACAGGAACGTGACCGTCACAGGGCGCCCTCCTaGAGGCTCGGGTCTATGATC +
Preference number: 4 (lower is better)
Translates to: LGIPVHSTSDSRKQERDRHRAPS*RLGSMI
Trigger: GATCATAGACCCGAGCCTCCAGGAGGGCGCCCTGTG...ACGGTCACGTTCCTGTTTCCTGGAATCACTGGTGCTATGAACTGGGATTCCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CCA 90 bp GGAGCGGCCCTTCTGCAGAGCTCTTTGGGTAGTAAGCAAGAGCCAGTCACAGAGCCCACTTCTTCCACGTaGATCTGGGGCACAGACATT +
Preference number: 4 (lower is better)
Translates to: GAALLQSSLGSKQEPVTEPTSST*IWGTDI
Trigger: AATGTCTGTGCCCCAGATCCACGTGGAAGAAGTGGG...CTCTGTGACTGGCTCTTGCTTACTACCCAAAGAGCTCTGCAGAAGGGCCGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CCA 90 bp CCTAGTAGCTCCCTGTCAATGTTGCTGAGTCATGTACTTAGGGTGAATTTGAGAGAGGTGGTCATCGGGTaGTGCGGCTGCTCCCGCCCC +
Preference number: 4 (lower is better)
Translates to: PSSSLSMLLSHVLRVNLREVVIG*CGCSRP
Trigger: GGGGCGGGAGCAGCCGCACCACCCGATGACCACCTC...TCTCAAATTCACCCTAAGTACATGACTCAGCAACATTGACAGGGAGCTACTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284486.9
ENST00000534308.1
CDS-3UTR CCA 90 bp CTTTGGGAATCCCAGTTCATAGCACCAGTGATTCCAGGAAACAGGAACGTGACCTTCAGGCTCCGGAGGTaGTCATCGGGTGGTGCGGCT +
Preference number: 4 (lower is better)
Translates to: LWESQFIAPVIPGNRNVTFRLRR*SSGGAA
Trigger: AGCCGCACCACCCGATGACCACCTCCGGAGCCTGAA...GGTCACGTTCCTGTTTCCTGGAATCACTGGTGCTATGAACTGGGATTCCCAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CCA 90 bp TTGGGAATCCCAGTTCATAGCACCAGTGATTCCAGGAAACAGGAACGTGACCGTGTCTGGCACCTTGGCTaGCACTCCTGGCAGAAGGGG +
Preference number: 4 (lower is better)
Translates to: LGIPVHSTSDSRKQERDRVWHLG*HSWQKG
Trigger: CCCCTTCTGCCAGGAGTGCCAGCCAAGGTGCCAGAC...ACGGTCACGTTCCTGTTTCCTGGAATCACTGGTGCTATGAACTGGGATTCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CCA 90 bp AGTGATTCCAGGAAACAGGAACGTGACCGTGGAGGGATGGATTATGGTGGGAACTGTCTGGCCAGTTGCTaGTCCTGCAGCCGCATCTCC +
Preference number: 4 (lower is better)
Translates to: SDSRKQERDRGGMDYGGNCLASC*SCSRIS
Trigger: GGAGATGCGGCTGCAGGACCAGCAACTGGCCAGACA...GTTCCCACCATAATCCATCCCTCCACGGTCACGTTCCTGTTTCCTGGAATCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CCA 90 bp CCTCAAGGGCTTATCTGGAAAGAGGTTGGCAGGAAAGGAATGCGTCTTCAGGACAGAGGAGGCTCAGGATaGGCCTCTGGGCTCCCTAGA +
Preference number: 4 (lower is better)
Translates to: PQGLIWKEVGRKGMRLQDRGGSG*ASGLPR
Trigger: TCTAGGGAGCCCAGAGGCCCATCCTGAGCCTCCTCT...GTCCTGAAGACGCATTCCTTTCCTGCCAACCTCTTTCCAGATAAGCCCTTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CCA 90 bp GAGCGGCCCTTCTGCAGAGCTCTTTGGGTAGTAAGCAAGAGCCAGTCACAGAGAAACCTCTCCCCTATGTaGGTCACGATGTGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: ERPFCRALWVVSKSQSQRNLSPM*VTMCGW
Trigger: CCACCCACACATCGTGACCCACATAGGGGAGAGGTT...TCTCTGTGACTGGCTCTTGCTTACTACCCAAAGAGCTCTGCAGAAGGGCCGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CCA 90 bp CCGTGCGTAGACCATGGGACAGTGATTAGTGACACATGCCCTGTGGGGCCACTGGCAGACAGTAGATCTTaGCTGCGTTGTTCTGCCTAC +
Preference number: 4 (lower is better)
Translates to: PCVDHGTVISDTCPVGPLADSRS*LRCSAY
Trigger: GTAGGCAGAACAACGCAGCCAAGATCTACTGTCTGC...CAGTGGCCCCACAGGGCATGTGTCACTAATCACTGTCCCATGGTCTACGCACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CCA 90 bp GGGACAGTGATTAGTGACACATGCCCTGTGGGGCCACTGTCAGTGCCTTGCTCCGCATGGCAGTGTCGGTaGAGAGTTTGCGTTTTACAC +
Preference number: 4 (lower is better)
Translates to: GTVISDTCPVGPLSVPCSAWQCR*RVCVLH
Trigger: GTGTAAAACGCAAACTCTCCACCGACACTGCCATGC...GGAGCAAGGCACTGACAGTGGCCCCACAGGGCATGTGTCACTAATCACTGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CCA 90 bp GGAAACAGGAACGTGACCGTGGAGGGATGGATTATGGTGGGAACCCAGGTCTCCCCCAGCAATAAGTTGTaGGGACAAGCTCAGGCTGTC +
Preference number: 4 (lower is better)
Translates to: GNRNVTVEGWIMVGTQVSPSNKL*GQAQAV
Trigger: GACAGCCTGAGCTTGTCCCCACAACTTATTGCTGGG...GGAGACCTGGGTTCCCACCATAATCCATCCCTCCACGGTCACGTTCCTGTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528897.1
CDS-3UTR TCA 90 bp GGAAACAGGAACGTGACCGTGGAGGGATGGATTATGGTGGGAACCCAGGTCTCCAAGGTCTATCTGTCCTaGACGCACTCGAAGACCAGA +
Preference number: 4 (lower is better)
Translates to: GNRNVTVEGWIMVGTQVSKVYLS*THSKTR
Trigger: TCTGGTCTTCGAGTGCGTTCAGGACAGATAGACCTT...GGAGACCTGGGTTCCCACCATAATCCATCCCTCCACGGTCACGTTCCTGTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR TCA 90 bp AAACAGGAACGTGACCGTGGAGGGATGGATTATGGTGGGAACCCAGGTCTCCTTCGATTTTCAGCTTGTTaGTGTCGCCACGCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: KQERDRGGMDYGGNPGLLRFSAC*CRHAGA
Trigger: TGCGCCTGCGTGGCGACATCAACAAGCTGAAAATCG...AAGGAGACCTGGGTTCCCACCATAATCCATCCCTCCACGGTCACGTTCCTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR TCA 90 bp GGAGCGGCCCTTCTGCAGAGCTCTTTGGGTAGTAAGCAAGAGCCAGTCACAGAGAGAACCTCCGAGAGTTaGTGTTCATCTTGGTCACGC +
Preference number: 4 (lower is better)
Translates to: GAALLQSSLGSKQEPVTERTSES*CSSWSR
Trigger: GCGTGACCAAGATGAACATCAACTCTCGGAGGTTCT...CTCTGTGACTGGCTCTTGCTTACTACCCAAAGAGCTCTGCAGAAGGGCCGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR TCA 90 bp TCCAGGAAACAGGAACGTGACCGTGGAGGGATGGATTATGGTGGGAACCCAGGTCAGGAAACAGGAACGTaGCCGTGGAGGGATGGATTA +
Preference number: 4 (lower is better)
Translates to: SRKQERDRGGMDYGGNPGQETGT*PWRDGL
Trigger: TAATCCATCCCTCCACGGTCACGTTCCTGTTTCCTG...ACCTGGGTTCCCACCATAATCCATCCCTCCACGGTCACGTTCCTGTTTCCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR TCA 90 bp GGCTCCCTAGATTGTCTTTCCAGAGAGGGCAGTAAGGTGACACCACCAGAATCCGAGAGGGCAGTAAGGTaGCACCACCAGAATCCACCA +
Preference number: 4 (lower is better)
Translates to: GSLDCLSREGSKVTPPESERAVR*HHQNPP
Trigger: TGGTGGATTCTGGTGGTGTCACCTTACTGCCCTCTC...GGATTCTGGTGGTGTCACCTTACTGCCCTCTCTGGAAAGACAATCTAGGGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR TCA 90 bp ATGACCACGCATGGCAGTGTCGGTGGAGAGTTTGCGTTTTACACCCAGCGATGCGGCCAATGTTGCTGCTaGCTCATAGACCCACAGAGA +
Preference number: 4 (lower is better)
Translates to: MTTHGSVGGEFAFYTQRCGQCCC*LIDPQR
Trigger: TCTCTGTGGGTCTATGAGTCAGCAGCAACATTGGCC...GCATCGCTGGGTGTAAAACGCAAACTCTCCACCGACACTGCCATGCGTGGTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR TCA 90 bp GTGTGCGGGTTTGGCAAAGCATCACGACCATCTTTGGGGTTCAAGTTCATTGACACTGTACACATGTGGTaGGCCAGGAGGCTGGGACGG +
Preference number: 4 (lower is better)
Translates to: VCGFGKASRPSLGFKFIDTVHMW*ARRLGR
Trigger: CCGTCCCAGCCTCCTGGCTCACCACATGTGTACAGT...GTCAATGAACTTGAACCCCAAAGATGGTCGTGATGCTTTGCCAAACCCGCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR GCA 90 bp AGTGATTCCAGGAAACAGGAACGTGACCGTGGAGGGATGGATTATGGTGGGAACTCTCGGGGCAGCCTGTaGCAAGGTCTATCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: SDSRKQERDRGGMDYGGNSRGSL*QGLSVL
Trigger: CAGGACAGATAGACCTTGGCACAGGCTGCCCCGAGA...GTTCCCACCATAATCCATCCCTCCACGGTCACGTTCCTGTTTCCTGGAATCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR GCA 90 bp CATGACCACGCATGGCAGTGTCGGTGGAGAGTTTGCGTTTTACACCCAGCGATGTTGGAGCGGCCCTTCTaGAGAGCTCTTTGGGTAGTA +
Preference number: 4 (lower is better)
Translates to: HDHAWQCRWRVCVLHPAMLERPF*RALWVV
Trigger: TACTACCCAAAGAGCTCTGCAGAAGGGCCGCTCCAA...CATCGCTGGGTGTAAAACGCAAACTCTCCACCGACACTGCCATGCGTGGTCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR GCA 90 bp GAGCGGCCCTTCTGCAGAGCTCTTTGGGTAGTAAGCAAGAGCCAGTCACAGAGACAGGCACATCTGACATaGCTAATTTCCCCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: ERPFCRALWVVSKSQSQRQAHLT*LISPKA
Trigger: GGCCTTGGGGGAAATTAGGCATGTCAGATGTGCCTG...TCTCTGTGACTGGCTCTTGCTTACTACCCAAAGAGCTCTGCAGAAGGGCCGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284486.9
ENST00000534308.1
CDS-3UTR GCA 90 bp ACATGCCCTGTGGGGCCACTGTCAGTGCCTTGCTCCACCTTGACCCAAATGTTCCAATGGGGACATCTGTaGTTGTTGCACCCAAGCTAC +
Preference number: 4 (lower is better)
Translates to: TCPVGPLSVPCSTLTQMFQWGHL*LLHPSY
Trigger: GTAGCTTGGGTGCAACAAGCACAGATGTCCCCATTG...GAACATTTGGGTCAAGGTGGAGCAAGGCACTGACAGTGGCCCCACAGGGCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR GCA 90 bp GGCTCCCTAGATTGTCTTTCCAGAGAGGGCAGTAAGGTGACACCACCAGAATCCGAGGCTCTTTGGAGATaGATGTGGCCAGGGGAGACA +
Preference number: 4 (lower is better)
Translates to: GSLDCLSREGSKVTPPESEALWR*MWPGET
Trigger: TGTCTCCCCTGGCCACATGCATCTCCAAAGAGCCTC...GGATTCTGGTGGTGTCACCTTACTGCCCTCTCTGGAAAGACAATCTAGGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR GCA 90 bp TCCAGGAAACAGGAACGTGACCGTGGAGGGATGGATTATGGTGGGAACCCAGGTCTGACCTCCCTAACCTaGTGGGGTCTTAACTTGCTG +
Preference number: 4 (lower is better)
Translates to: SRKQERDRGGMDYGGNPGLTSLT*WGLNLL
Trigger: CAGCAAGTTAAGACCCCAGCAGGTTAGGGAGGTCAG...ACCTGGGTTCCCACCATAATCCATCCCTCCACGGTCACGTTCCTGTTTCCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR GCA 90 bp CGTGAGACAGGCACATCTGACATGCCTAATTTCCCCCAAGGCCCTTGCGGGACAACTTGGCAGTGTTTGTaGAGAGCTCTGAGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: RETGTSDMPNFPQGPCGTTWQCL*RALRKD
Trigger: GTCCTTCCTCAGAGCTCTGCACAAACACTGCCAAGT...TGTCCCGCAAGGGCCTTGGGGGAAATTAGGCATGTCAGATGTGCCTGTCTCACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR GCA 90 bp GGAAACAGGAACGTGACCGTGGAGGGATGGATTATGGTGGGAACCCAGGTCTCCTGTCGGTGGAGAGTTTaGGTTTTACACCCAGCGATG +
Preference number: 4 (lower is better)
Translates to: GNRNVTVEGWIMVGTQVSCRWRV*VLHPAM
Trigger: CATCGCTGGGTGTAAAACGCAAACTCTCCACCGACA...GGAGACCTGGGTTCCCACCATAATCCATCCCTCCACGGTCACGTTCCTGTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CCA 90 bp AAACAGGAACGTGACCGTGGAGGGATGGATTATGGTGGGAACCCAGGTCTCCTTACTCGAAGACCAGACTaGCAGGAAGAAGGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: KQERDRGGMDYGGNPGLLTRRPD*QEEGPE
Trigger: CTCTGGGCCTTCTTCCTGCCAGTCTGGTCTTCGAGT...AAGGAGACCTGGGTTCCCACCATAATCCATCCCTCCACGGTCACGTTCCTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CCA 90 bp AAACAGGAACGTGACCGTGGAGGGATGGATTATGGTGGGAACCCAGGTCTCCTTGTCTATGATCCGTCCTaGAAGCCTGTGGGTGCCATG +
Preference number: 4 (lower is better)
Translates to: KQERDRGGMDYGGNPGLLVYDPS*KPVGAM
Trigger: CATGGCACCCACAGGCTTCCAGGACGGATCATAGAC...AAGGAGACCTGGGTTCCCACCATAATCCATCCCTCCACGGTCACGTTCCTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CCA 90 bp GCGGCCCTTCTGCAGAGCTCTTTGGGTAGTAAGCAAGAGCCAGTCACAGAGACACCCACTTCTTCCACGTaGATCTGGGGCACAGACATT +
Preference number: 4 (lower is better)
Translates to: AALLQSSLGSKQEPVTETPTSST*IWGTDI
Trigger: AATGTCTGTGCCCCAGATCCACGTGGAAGAAGTGGG...TGTCTCTGTGACTGGCTCTTGCTTACTACCCAAAGAGCTCTGCAGAAGGGCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CCA 90 bp GTGTGCGGGTTTGGCAAAGCATCACGACCATCTTTGGGGTTCAAGTTCATTGACAGGGGTCTGGCACCTTaGCTGGCACTCCTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: VCGFGKASRPSLGFKFIDRGLAP*LALLAE
Trigger: TTCTGCCAGGAGTGCCAGCCAAGGTGCCAGACCCCT...GTCAATGAACTTGAACCCCAAAGATGGTCGTGATGCTTTGCCAAACCCGCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR CAA 72 bp GACAGCAGTACATGGTCCTCAGGCCTGCAGACTTCATaGCACAGAGCATGGCAGACAGTAGATCTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: DSSTWSSGLQTS*HRAWQTVDLGC
Trigger: GCAGCCAAGATCTACTGTCTGCCATGCTCTGTGCAATGAAGTCTGCAGGCCTGAGGACCATGTACTGCTGTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR CAA 72 bp TGTAATAGCACTTGGTATTGCTACAGGGTGTGGGTCTaGAACTCGGTCAGGCATCGTCAAGCCTGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: CNSTWYCYRVWV*NSVRHRQACPG
Trigger: GCCTGGGCAGGCTTGACGATGCCTGACCGAGTTCAAGACCCACACCCTGTAGCAATACCAAGTGCTATTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR TCA 90 bp AAACAGGAACGTGACCGTGGAGGGATGGATTATGGTGGGAACCCAGGTCTCCTTCAGGAAACAGGAACGTaGCCGTGGAGGGATGGATTA +
Preference number: 4 (lower is better)
Translates to: KQERDRGGMDYGGNPGLLQETGT*PWRDGL
Trigger: TAATCCATCCCTCCACGGTCACGTTCCTGTTTCCTG...AAGGAGACCTGGGTTCCCACCATAATCCATCCCTCCACGGTCACGTTCCTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR TCA 90 bp GGGAAGTCCTTCTCCTCCCCCAGGTTTCACTTTGCTCCTTTACTAATGAGAGGAACAGGGTGTGGGTCTTaGACTCGGTCAGGCATCGTC +
Preference number: 4 (lower is better)
Translates to: GKSFSSPRFHFAPLLMRGTGCGS*TRSGIV
Trigger: GACGATGCCTGACCGAGTTCAAGACCCACACCCTGT...TCCTCTCATTAGTAAAGGAGCAAAGTGAAACCTGGGGGAGGAGAAGGACTTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR GCA 90 bp GGGAAGTCCTTCTCCTCCCCCAGGTTTCACTTTGCTCCTTTACTAATGAGAGGATCTCGGGGCAGCCTGTaGCAAGGTCTATCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: GKSFSSPRFHFAPLLMRGSRGSL*QGLSVL
Trigger: CAGGACAGATAGACCTTGGCACAGGCTGCCCCGAGA...TCCTCTCATTAGTAAAGGAGCAAAGTGAAACCTGGGGGAGGAGAAGGACTTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR GCA 90 bp AGTTATGGAAAATGCTTTCAGGACCTGCCTGGTTCAGTCACCAGTGGTCTCCCACTGGAAGCCTGTGGGTaGCATGCTCCACAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: SYGKCFQDLPGSVTSGLPLEACG*HAPQKA
Trigger: TGCCTTCTGTGGAGCATGGCACCCACAGGCTTCCAG...TGGGAGACCACTGGTGACTGAACCAGGCAGGTCCTGAAAGCATTTTCCATAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR GCA 90 bp TTGGGAATCCCAGTTCATAGCACCAGTGATTCCAGGAAACAGGAACGTGACCGTTTCCCCCAAGGCCCTTaGGGGACAGCCTTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: LGIPVHSTSDSRKQERDRFPQGP*GTAFCK
Trigger: TTTGCAGAAGGCTGTCCCGCAAGGGCCTTGGGGGAA...ACGGTCACGTTCCTGTTTCCTGGAATCACTGGTGCTATGAACTGGGATTCCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284486.9
ENST00000534308.1
CDS-3UTR GCA 90 bp ACATGCCCTGTGGGGCCACTGTCAGTGCCTTGCTCCACCTTGACCCAAATGTTCTGGGATGGGCTTTCCTaGATGGGTTCAAGGATGTTT +
Preference number: 4 (lower is better)
Translates to: TCPVGPLSVPCSTLTQMFWDGLS*MGSRMF
Trigger: AAACATCCTTGAACCCATGCAGGAAAGCCCATCCCA...GAACATTTGGGTCAAGGTGGAGCAAGGCACTGACAGTGGCCCCACAGGGCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CCA 90 bp TTGGGAATCCCAGTTCATAGCACCAGTGATTCCAGGAAACAGGAACGTGACCGTCGTCCTGGAAGCCTGTaGGTGCCATGCTCCACAGAA +
Preference number: 4 (lower is better)
Translates to: LGIPVHSTSDSRKQERDRRPGSL*VPCSTE
Trigger: TTCTGTGGAGCATGGCACCCACAGGCTTCCAGGACG...ACGGTCACGTTCCTGTTTCCTGGAATCACTGGTGCTATGAACTGGGATTCCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CCA 90 bp GAGCGGCCCTTCTGCAGAGCTCTTTGGGTAGTAAGCAAGAGCCAGTCACAGAGATCTTCCACGTGGATCTaGGGCACAGACATTCTACAG +
Preference number: 4 (lower is better)
Translates to: ERPFCRALWVVSKSQSQRSSTWI*GTDILQ
Trigger: CTGTAGAATGTCTGTGCCCCAGATCCACGTGGAAGA...TCTCTGTGACTGGCTCTTGCTTACTACCCAAAGAGCTCTGCAGAAGGGCCGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CCA 90 bp TTGGGAATCCCAGTTCATAGCACCAGTGATTCCAGGAAACAGGAACGTGACCGTTTGAGCATCCTCCTGTaGAGGCGGCAGGTGTGTTCG +
Preference number: 4 (lower is better)
Translates to: LGIPVHSTSDSRKQERDRLSILL*RRQVCS
Trigger: CGAACACACCTGCCGCCTCCACAGGAGGATGCTCAA...ACGGTCACGTTCCTGTTTCCTGGAATCACTGGTGCTATGAACTGGGATTCCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CCA 90 bp CTTTGGGAATCCCAGTTCATAGCACCAGTGATTCCAGGAAACAGGAACGTGACCTTGAGCATCCTCCTGTaGAGGCGGCAGGTGTGTTCG +
Preference number: 4 (lower is better)
Translates to: LWESQFIAPVIPGNRNVTLSILL*RRQVCS
Trigger: CGAACACACCTGCCGCCTCCACAGGAGGATGCTCAA...GGTCACGTTCCTGTTTCCTGGAATCACTGGTGCTATGAACTGGGATTCCCAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CCA 90 bp GGAGCGGCCCTTCTGCAGAGCTCTTTGGGTAGTAAGCAAGAGCCAGTCACAGAGTTCTGCAGAGCTCTTTaGGTAGTAAGCAAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: GAALLQSSLGSKQEPVTEFCRAL*VVSKSQ
Trigger: CTGGCTCTTGCTTACTACCCAAAGAGCTCTGCAGAA...CTCTGTGACTGGCTCTTGCTTACTACCCAAAGAGCTCTGCAGAAGGGCCGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CCA 90 bp GAGCGGCCCTTCTGCAGAGCTCTTTGGGTAGTAAGCAAGAGCCAGTCACAGAGATCTCCTTTAACATCTTaGTTGGAGCGGCCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: ERPFCRALWVVSKSQSQRSPLTS*LERPFC
Trigger: GCAGAAGGGCCGCTCCAACCAAGATGTTAAAGGAGA...TCTCTGTGACTGGCTCTTGCTTACTACCCAAAGAGCTCTGCAGAAGGGCCGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CCA 90 bp CCGTGCGTAGACCATGGGACAGTGATTAGTGACACATGCCCTGTGGGGCCACTGGATCCTCAAGCCTGTTaGGAGGGAGAAACTCTTAAA +
Preference number: 4 (lower is better)
Translates to: PCVDHGTVISDTCPVGPLDPQAC*EGETLK
Trigger: TTTAAGAGTTTCTCCCTCCCAACAGGCTTGAGGATC...CAGTGGCCCCACAGGGCATGTGTCACTAATCACTGTCCCATGGTCTACGCACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CCA 90 bp GCGGCCCTTCTGCAGAGCTCTTTGGGTAGTAAGCAAGAGCCAGTCACAGAGACACTCCACTTCTCATCTTaGGTCACCTCCTCATCCCAT +
Preference number: 4 (lower is better)
Translates to: AALLQSSLGSKQEPVTETLHFSS*VTSSSH
Trigger: ATGGGATGAGGAGGTGACCCAAGATGAGAAGTGGAG...TGTCTCTGTGACTGGCTCTTGCTTACTACCCAAAGAGCTCTGCAGAAGGGCCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CCA 90 bp GAGCGGCCCTTCTGCAGAGCTCTTTGGGTAGTAAGCAAGAGCCAGTCACAGAGATATTGCTACAGGGTGTaGGTCTTGAACTCGGTCAGG +
Preference number: 4 (lower is better)
Translates to: ERPFCRALWVVSKSQSQRYCYRV*VLNSVR
Trigger: CCTGACCGAGTTCAAGACCCACACCCTGTAGCAATA...TCTCTGTGACTGGCTCTTGCTTACTACCCAAAGAGCTCTGCAGAAGGGCCGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR TCA 90 bp AAACAGGAACGTGACCGTGGAGGGATGGATTATGGTGGGAACCCAGGTCTCCTTAAGGTCTATCTGTCCTaGACGCACTCGAAGACCAGA +
Preference number: 4 (lower is better)
Translates to: KQERDRGGMDYGGNPGLLKVYLS*THSKTR
Trigger: TCTGGTCTTCGAGTGCGTTCAGGACAGATAGACCTT...AAGGAGACCTGGGTTCCCACCATAATCCATCCCTCCACGGTCACGTTCCTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR TCA 90 bp AGTGATTCCAGGAAACAGGAACGTGACCGTGGAGGGATGGATTATGGTGGGAACGCTTCATCGATGCTCTaGAAGCCTTCCAGCTTGCCA +
Preference number: 4 (lower is better)
Translates to: SDSRKQERDRGGMDYGGNASSML*KPSSLP
Trigger: TGGCAAGCTGGAAGGCTTTCAGAGCATCGATGAAGC...GTTCCCACCATAATCCATCCCTCCACGGTCACGTTCCTGTTTCCTGGAATCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CCA 90 bp GAGCAGGGACTTCACAAAGCTGAATTAATGTGGTTAGTTGTGTTCACTGTGCAAGGTGGGTGGCACAGTTaGGTCCCGCTCTGGGATGGC +
Preference number: 4 (lower is better)
Translates to: EQGLHKAELMWLVVFTVQGGWHS*VPLWDG
Trigger: GCCATCCCAGAGCGGGACCCAACTGTGCCACCCACC...TTGCACAGTGAACACAACTAACCACATTAATTCAGCTTTGTGAAGTCCCTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CCA 90 bp AAACAGGAACGTGACCGTGGAGGGATGGATTATGGTGGGAACCCAGGTCTCCTTTCTTCCACGTGGATCTaGGGCACAGACATTCTACAG +
Preference number: 4 (lower is better)
Translates to: KQERDRGGMDYGGNPGLLSSTWI*GTDILQ
Trigger: CTGTAGAATGTCTGTGCCCCAGATCCACGTGGAAGA...AAGGAGACCTGGGTTCCCACCATAATCCATCCCTCCACGGTCACGTTCCTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CCA 90 bp CCTCAAGGGCTTATCTGGAAAGAGGTTGGCAGGAAAGGAATGCGTCTTCAGGACCCCACTTCTTCCACGTaGATCTGGGGCACAGACATT +
Preference number: 4 (lower is better)
Translates to: PQGLIWKEVGRKGMRLQDPTSST*IWGTDI
Trigger: AATGTCTGTGCCCCAGATCCACGTGGAAGAAGTGGG...GTCCTGAAGACGCATTCCTTTCCTGCCAACCTCTTTCCAGATAAGCCCTTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CCA 90 bp AAACAGGAACGTGACCGTGGAGGGATGGATTATGGTGGGAACCCAGGTCTCCTTGCCAATAAGCTTGAGTaGTGTGGAGAGGCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: KQERDRGGMDYGGNPGLLANKLE*CGEAEG
Trigger: TCCTTCAGCCTCTCCACACCACTCAAGCTTATTGGC...AAGGAGACCTGGGTTCCCACCATAATCCATCCCTCCACGGTCACGTTCCTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CCA 90 bp GTGTGCGGGTTTGGCAAAGCATCACGACCATCTTTGGGGTTCAAGTTCATTGACGTGACCGTGGAGGGATaGATTATGGTGGGAACCCAG +
Preference number: 4 (lower is better)
Translates to: VCGFGKASRPSLGFKFIDVTVEG*IMVGTQ
Trigger: CTGGGTTCCCACCATAATCCATCCCTCCACGGTCAC...GTCAATGAACTTGAACCCCAAAGATGGTCGTGATGCTTTGCCAAACCCGCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CCA 90 bp CTTTGGGAATCCCAGTTCATAGCACCAGTGATTCCAGGAAACAGGAACGTGACCGGCAGTGTGCGGGTTTaGCAAAGCATCACGACCATC +
Preference number: 4 (lower is better)
Translates to: LWESQFIAPVIPGNRNVTGSVRV*QSITTI
Trigger: GATGGTCGTGATGCTTTGCCAAACCCGCACACTGCC...GGTCACGTTCCTGTTTCCTGGAATCACTGGTGCTATGAACTGGGATTCCCAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CCA 90 bp TGGGGACATCTGTGCTTGTTGCACCCAAGCTACGCTAGTGCCCCCATCACATGTTCATTGCACAGAGCATaGCAGACAGTAGATCTTGGC +
Preference number: 4 (lower is better)
Translates to: WGHLCLLHPSYASAPITCSLHRA*QTVDLG
Trigger: GCCAAGATCTACTGTCTGCCATGCTCTGTGCAATGA...ACATGTGATGGGGGCACTAGCGTAGCTTGGGTGCAACAAGCACAGATGTCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CCA 90 bp CCGTGCGTAGACCATGGGACAGTGATTAGTGACACATGCCCTGTGGGGCCACTGGTTCAAGGATGTTTATaGCATGTTCTCTGTCGTGTG +
Preference number: 4 (lower is better)
Translates to: PCVDHGTVISDTCPVGPLVQGCL*HVLCRV
Trigger: CACACGACAGAGAACATGCCATAAACATCCTTGAAC...CAGTGGCCCCACAGGGCATGTGTCACTAATCACTGTCCCATGGTCTACGCACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CCA 90 bp ACATGCCCTGTGGGGCCACTGTCAGTGCCTTGCTCCACCTTGACCCAAATGTTCATGGGCTTTCCTGCATaGGTTCAAGGATGTTTATGG +
Preference number: 4 (lower is better)
Translates to: TCPVGPLSVPCSTLTQMFMGFPA*VQGCLW
Trigger: CCATAAACATCCTTGAACCCATGCAGGAAAGCCCAT...GAACATTTGGGTCAAGGTGGAGCAAGGCACTGACAGTGGCCCCACAGGGCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CCA 90 bp CGTGAGACAGGCACATCTGACATGCCTAATTTCCCCCAAGGCCCTTGCGGGACAGGGATGGCAGAGAGATaGATGGATAATGAGTACAAC +
Preference number: 4 (lower is better)
Translates to: RETGTSDMPNFPQGPCGTGMAER*MDNEYN
Trigger: GTTGTACTCATTATCCATCCATCTCTCTGCCATCCC...TGTCCCGCAAGGGCCTTGGGGGAAATTAGGCATGTCAGATGTGCCTGTCTCACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR TCA 90 bp GTGTGCGGGTTTGGCAAAGCATCACGACCATCTTTGGGGTTCAAGTTCATTGACGGGGTCTTAACTTGCTaGTCCTCAAGCCTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: VCGFGKASRPSLGFKFIDGVLTC*SSSLLG
Trigger: TCCCAACAGGCTTGAGGATCAGCAAGTTAAGACCCC...GTCAATGAACTTGAACCCCAAAGATGGTCGTGATGCTTTGCCAAACCCGCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR GCA 90 bp GCGGCCCTTCTGCAGAGCTCTTTGGGTAGTAAGCAAGAGCCAGTCACAGAGACATGCGGGACAGCCTTCTaGAAAAATGACAGCTTTGTT +
Preference number: 4 (lower is better)
Translates to: AALLQSSLGSKQEPVTETCGTAF*KNDSFV
Trigger: AACAAAGCTGTCATTTTTGCAGAAGGCTGTCCCGCA...TGTCTCTGTGACTGGCTCTTGCTTACTACCCAAAGAGCTCTGCAGAAGGGCCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284486.9
ENST00000534308.1
CDS-3UTR GCA 90 bp TTGGGGATGGCAGAGAGATGGATGGATAATGAGTACAACTGCAAACAGCACTGTCCCCGGTCACGCCCCTaGAGGAGAATTCAGTTATGG +
Preference number: 4 (lower is better)
Translates to: LGMAERWMDNEYNCKQHCPRSRP*RRIQLW
Trigger: CCATAACTGAATTCTCCTGCAGGGGCGTGACCGGGG...ACAGTGCTGTTTGCAGTTGTACTCATTATCCATCCATCTCTCTGCCATCCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR GCA 90 bp TGGGGACATCTGTGCTTGTTGCACCCAAGCTACGCTAGTGCCCCCATCACATGTCCCCAGGTTTCACTTTaGTCCTTTACTAATGAGAGG +
Preference number: 4 (lower is better)
Translates to: WGHLCLLHPSYASAPITCPQVSL*SFTNER
Trigger: CCTCTCATTAGTAAAGGAGCAAAGTGAAACCTGGGG...ACATGTGATGGGGGCACTAGCGTAGCTTGGGTGCAACAAGCACAGATGTCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CCA 90 bp TTCACTGTGCAAAGTAAGGAAGCCAGTCAACACTGGACGATGTTTAGAAAACATCTCGGGAAGGGCAGGTaGCTGGAGACCCTTCCGGGA +
Preference number: 4 (lower is better)
Translates to: FTVQSKEASQHWTMFRKHLGKGR*LETLPG
Trigger: TCCCGGAAGGGTCTCCAGCCACCTGCCCTTCCCGAG...ATGTTTTCTAAACATCGTCCAGTGTTGACTGGCTTCCTTACTTTGCACAGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CCA 90 bp AGTGATTCCAGGAAACAGGAACGTGACCGTGGAGGGATGGATTATGGTGGGAACTCTTCCACGTGGATCTaGGGCACAGACATTCTACAG +
Preference number: 4 (lower is better)
Translates to: SDSRKQERDRGGMDYGGNSSTWI*GTDILQ
Trigger: CTGTAGAATGTCTGTGCCCCAGATCCACGTGGAAGA...GTTCCCACCATAATCCATCCCTCCACGGTCACGTTCCTGTTTCCTGGAATCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CCA 90 bp GTTTCACTTTGCTCCTTTACTAATGAGAGGACTCGACTAGATGACACCAAAGGTGTGGGTCACGATGTGTaGGTGGACACGGGCCCCACT +
Preference number: 4 (lower is better)
Translates to: VSLCSFTNERTRLDDTKGVGHDV*VDTGPT
Trigger: AGTGGGGCCCGTGTCCACCCACACATCGTGACCCAC...ACCTTTGGTGTCATCTAGTCGAGTCCTCTCATTAGTAAAGGAGCAAAGTGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CCA 90 bp CATGACCACGCATGGCAGTGTCGGTGGAGAGTTTGCGTTTTACACCCAGCGATGTTTCAGAATATGGGATaGGCTTTCCTGCATGGGTTC +
Preference number: 4 (lower is better)
Translates to: HDHAWQCRWRVCVLHPAMFQNMG*AFLHGF
Trigger: GAACCCATGCAGGAAAGCCCATCCCATATTCTGAAA...CATCGCTGGGTGTAAAACGCAAACTCTCCACCGACACTGCCATGCGTGGTCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR CAA 72 bp GTCGGTGGAGAGTTTGCGTTTTACACCCAGCGATGCTaGGGGATGGCAGAGAGATGGATGGATAATGAGTAC +
Preference number: 4 (lower is better)
Translates to: VGGEFAFYTQRC*GMAERWMDNEY
Trigger: GTACTCATTATCCATCCATCTCTCTGCCATCCCCAAGCATCGCTGGGTGTAAAACGCAAACTCTCCACCGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR TCA 90 bp GTTTCACTTTGCTCCTTTACTAATGAGAGGACTCGACTAGATGACACCAAAGGTGGAGGCTCGGGTCTATaGTCCGTCCTGGAAGCCTGT +
Preference number: 4 (lower is better)
Translates to: VSLCSFTNERTRLDDTKGGGSGL*SVLEAC
Trigger: ACAGGCTTCCAGGACGGATCATAGACCCGAGCCTCC...ACCTTTGGTGTCATCTAGTCGAGTCCTCTCATTAGTAAAGGAGCAAAGTGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR GCA 90 bp GGCTCCCTAGATTGTCTTTCCAGAGAGGGCAGTAAGGTGACACCACCAGAATCCTGCGGGACAGCCTTCTaGAAAAATGACAGCTTTGTT +
Preference number: 4 (lower is better)
Translates to: GSLDCLSREGSKVTPPESCGTAF*KNDSFV
Trigger: AACAAAGCTGTCATTTTTGCAGAAGGCTGTCCCGCA...GGATTCTGGTGGTGTCACCTTACTGCCCTCTCTGGAAAGACAATCTAGGGAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CCA 90 bp GGGAAGTCCTTCTCCTCCCCCAGGTTTCACTTTGCTCCTTTACTAATGAGAGGAGCCAATAAGCTTGAGTaGTGTGGAGAGGCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: GKSFSSPRFHFAPLLMRGANKLE*CGEAEG
Trigger: TCCTTCAGCCTCTCCACACCACTCAAGCTTATTGGC...TCCTCTCATTAGTAAAGGAGCAAAGTGAAACCTGGGGGAGGAGAAGGACTTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CCA 90 bp CCTAGTAGCTCCCTGTCAATGTTGCTGAGTCATGTACTTAGGGTGAATTTGAGACTCCGGGAGACCCACTaGAGTAACTTGGCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: PSSSLSMLLSHVLRVNLRLRETH*SNLASA
Trigger: AGCTGAGGCCAAGTTACTCCAGTGGGTCTCCCGGAG...TCTCAAATTCACCCTAAGTACATGACTCAGCAACATTGACAGGGAGCTACTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284486.9
ENST00000534308.1
CDS-3UTR CCA 90 bp TTCACTGTGCAAAGTAAGGAAGCCAGTCAACACTGGACGATGTTTAGAAAACATGCTCACCAGAGACACTaGCTGCCAGCCACTGGGGCT +
Preference number: 4 (lower is better)
Translates to: FTVQSKEASQHWTMFRKHAHQRH*LPATGA
Trigger: AGCCCCAGTGGCTGGCAGCCAGTGTCTCTGGTGAGC...ATGTTTTCTAAACATCGTCCAGTGTTGACTGGCTTCCTTACTTTGCACAGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CCA 90 bp AAACAGGAACGTGACCGTGGAGGGATGGATTATGGTGGGAACCCAGGTCTCCTTGTTGACCTACACAAGTaGCTTCCGCATTTGGACAAA +
Preference number: 4 (lower is better)
Translates to: KQERDRGGMDYGGNPGLLVDLHK*LPHLDK
Trigger: TTTGTCCAAATGCGGAAGCCACTTGTGTAGGTCAAC...AAGGAGACCTGGGTTCCCACCATAATCCATCCCTCCACGGTCACGTTCCTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CCA 90 bp GGAAAATGCTTTCAGGACCTGCCTGGTTCAGTCACCAGTGGTCTCCCAGGCTGTCATCACGACCATCTTTaGGGTTCAAGTTCATTGACA +
Preference number: 4 (lower is better)
Translates to: GKCFQDLPGSVTSGLPGCHHDHL*GSSSLT
Trigger: TGTCAATGAACTTGAACCCCAAAGATGGTCGTGATG...ACAGCCTGGGAGACCACTGGTGACTGAACCAGGCAGGTCCTGAAAGCATTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR TCA 90 bp CCTAGTAGCTCCCTGTCAATGTTGCTGAGTCATGTACTTAGGGTGAATTTGAGACGATTTTCAGCTTGTTaGTGTCGCCACGCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: PSSSLSMLLSHVLRVNLRRFSAC*CRHAGA
Trigger: TGCGCCTGCGTGGCGACATCAACAAGCTGAAAATCG...TCTCAAATTCACCCTAAGTACATGACTCAGCAACATTGACAGGGAGCTACTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284486.9
ENST00000534308.1
CDS-3UTR TCA 90 bp GGGAAGTCCTTCTCCTCCCCCAGGTTTCACTTTGCTCCTTTACTAATGAGAGGAGAGGACTCGACTAGATaGCACCAAAGGTCAGAAACA +
Preference number: 4 (lower is better)
Translates to: GKSFSSPRFHFAPLLMRGEDSTR*HQRSET
Trigger: TGTTTCTGACCTTTGGTGTCATCTAGTCGAGTCCTC...TCCTCTCATTAGTAAAGGAGCAAAGTGAAACCTGGGGGAGGAGAAGGACTTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR GCA 90 bp AGACATTTAACTTATCCCCAAACATGTGTCTTGATCTTAGTTTCCACCCAGAGACCAGGTAGGAGGGCCTaGGGGTCTCCAGCCTCAGTT +
Preference number: 4 (lower is better)
Translates to: RHLTYPQTCVLILVSTQRPGRRA*GSPASV
Trigger: AACTGAGGCTGGAGACCCGCAGGCCCTCCTACCTGG...TCTCTGGGTGGAAACTAAGATCAAGACACATGTTTGGGGATAAGTTAAATGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CCA 90 bp GAGCAGGGACTTCACAAAGCTGAATTAATGTGGTTAGTTGTGTTCACTGTGCAACTCCGGGAGACCCACTaGAGTAACTTGGCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: EQGLHKAELMWLVVFTVQLRETH*SNLASA
Trigger: AGCTGAGGCCAAGTTACTCCAGTGGGTCTCCCGGAG...TTGCACAGTGAACACAACTAACCACATTAATTCAGCTTTGTGAAGTCCCTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CCA 90 bp TTGGGAATCCCAGTTCATAGCACCAGTGATTCCAGGAAACAGGAACGTGACCGTCCTCAAGGGCTTATCTaGAAAGAGGTTGGCAGGAAA +
Preference number: 4 (lower is better)
Translates to: LGIPVHSTSDSRKQERDRPQGLI*KEVGRK
Trigger: TTTCCTGCCAACCTCTTTCCAGATAAGCCCTTGAGG...ACGGTCACGTTCCTGTTTCCTGGAATCACTGGTGCTATGAACTGGGATTCCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CCA 90 bp CATGACCACGCATGGCAGTGTCGGTGGAGAGTTTGCGTTTTACACCCAGCGATGTTATGTAATAGCACTTaGTATTGCTACAGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: HDHAWQCRWRVCVLHPAMLCNST*YCYRVW
Trigger: CCACACCCTGTAGCAATACCAAGTGCTATTACATAA...CATCGCTGGGTGTAAAACGCAAACTCTCCACCGACACTGCCATGCGTGGTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR TCA 90 bp TTGGGGATGGCAGAGAGATGGATGGATAATGAGTACAACTGCAAACAGCACTGTAGAACCTCCGAGAGTTaGTGTTCATCTTGGTCACGC +
Preference number: 4 (lower is better)
Translates to: LGMAERWMDNEYNCKQHCRTSES*CSSWSR
Trigger: GCGTGACCAAGATGAACATCAACTCTCGGAGGTTCT...ACAGTGCTGTTTGCAGTTGTACTCATTATCCATCCATCTCTCTGCCATCCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR TCA 90 bp TTTTCAGAATATGGGATGGGCTTTCCTGCATGGGTTCAAGGATGTTTATGGCATGGACACGGGCCCCACTaGGATTACACAGGAAGAAGT +
Preference number: 4 (lower is better)
Translates to: FSEYGMGFPAWVQGCLWHGHGPH*DYTGRS
Trigger: ACTTCTTCCTGTGTAATCTCAGTGGGGCCCGTGTCC...ATGCCATAAACATCCTTGAACCCATGCAGGAAAGCCCATCCCATATTCTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR GCA 90 bp TTATGTAATAGCACTTGGTATTGCTACAGGGTGTGGGTCTTGAACTCGGTCAGGGACATCTGTGCTTGTTaGACCCAAGCTACGCTAGTG +
Preference number: 4 (lower is better)
Translates to: LCNSTWYCYRVWVLNSVRDICAC*TQATLV
Trigger: CACTAGCGTAGCTTGGGTGCAACAAGCACAGATGTC...CCTGACCGAGTTCAAGACCCACACCCTGTAGCAATACCAAGTGCTATTACATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR GCA 90 bp TGGGGACATCTGTGCTTGTTGCACCCAAGCTACGCTAGTGCCCCCATCACATGTGATAATGAGTACAACTaGAAACAGCACTGTACACAT +
Preference number: 4 (lower is better)
Translates to: WGHLCLLHPSYASAPITCDNEYN*KQHCTH
Trigger: ATGTGTACAGTGCTGTTTGCAGTTGTACTCATTATC...ACATGTGATGGGGGCACTAGCGTAGCTTGGGTGCAACAAGCACAGATGTCCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CCA 90 bp CAAGCAACTAAATCACTCAGTTGCATCCAACTTAATTGGACTGACTACATTCAGAGGATTCTACGGGTCTaGCCGAGGGACCCCTGCCAT +
Preference number: 4 (lower is better)
Translates to: QATKSLSCIQLNWTDYIQRILRV*PRDPCH
Trigger: ATGGCAGGGGTCCCTCGGCCAGACCCGTAGAATCCT...CTGAATGTAGTCAGTCCAATTAAGTTGGATGCAACTGAGTGATTTAGTTGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CCA 90 bp TTGGGGATGGCAGAGAGATGGATGGATAATGAGTACAACTGCAAACAGCACTGTAGCGATGCTTGGGGATaGCAGAGAGATGGATGGATA +
Preference number: 4 (lower is better)
Translates to: LGMAERWMDNEYNCKQHCSDAWG*QRDGWI
Trigger: TATCCATCCATCTCTCTGCCATCCCCAAGCATCGCT...ACAGTGCTGTTTGCAGTTGTACTCATTATCCATCCATCTCTCTGCCATCCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR TCA 90 bp GGGAAGTCCTTCTCCTCCCCCAGGTTTCACTTTGCTCCTTTACTAATGAGAGGATTGACCCAAATGTTCTaGATTGCAATACTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: GKSFSSPRFHFAPLLMRGLTQMF*IAILWE
Trigger: CTCCCAGAGTATTGCAATTCAGAACATTTGGGTCAA...TCCTCTCATTAGTAAAGGAGCAAAGTGAAACCTGGGGGAGGAGAAGGACTTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR TCA 90 bp GGGAAGTCCTTCTCCTCCCCCAGGTTTCACTTTGCTCCTTTACTAATGAGAGGATCTTTCCATTTTCGCTaGACCCAATGGTTTCGGTTA +
Preference number: 4 (lower is better)
Translates to: GKSFSSPRFHFAPLLMRGSFHFR*TQWFRL
Trigger: TAACCGAAACCATTGGGTTCAGCGAAAATGGAAAGA...TCCTCTCATTAGTAAAGGAGCAAAGTGAAACCTGGGGGAGGAGAAGGACTTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR GCA 90 bp TTCACTGTGCAAAGTAAGGAAGCCAGTCAACACTGGACGATGTTTAGAAAACATGAGGGGTTGGCAGTGTaGGGGTTTGGCAAAGCATCA +
Preference number: 4 (lower is better)
Translates to: FTVQSKEASQHWTMFRKHEGLAV*GFGKAS
Trigger: TGATGCTTTGCCAAACCCGCACACTGCCAACCCCTC...ATGTTTTCTAAACATCGTCCAGTGTTGACTGGCTTCCTTACTTTGCACAGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR GCA 90 bp CCTAGTAGCTCCCTGTCAATGTTGCTGAGTCATGTACTTAGGGTGAATTTGAGATTTTACACCCAGCGATaGTTGGGGATGGCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: PSSSLSMLLSHVLRVNLRFYTQR*LGMAER
Trigger: TCTCTCTGCCATCCCCAAGCATCGCTGGGTGTAAAA...TCTCAAATTCACCCTAAGTACATGACTCAGCAACATTGACAGGGAGCTACTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CCA 90 bp CCTAGTAGCTCCCTGTCAATGTTGCTGAGTCATGTACTTAGGGTGAATTTGAGAGCCAATAAGCTTGAGTaGTGTGGAGAGGCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: PSSSLSMLLSHVLRVNLRANKLE*CGEAEG
Trigger: TCCTTCAGCCTCTCCACACCACTCAAGCTTATTGGC...TCTCAAATTCACCCTAAGTACATGACTCAGCAACATTGACAGGGAGCTACTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284486.9
ENST00000534308.1
CDS-3UTR CCA 90 bp GTTTCACTTTGCTCCTTTACTAATGAGAGGACTCGACTAGATGACACCAAAGGTAGACATGACCACGCATaGCAGTGTCGGTGGAGAGTT +
Preference number: 4 (lower is better)
Translates to: VSLCSFTNERTRLDDTKGRHDHA*QCRWRV
Trigger: AACTCTCCACCGACACTGCCATGCGTGGTCATGTCT...ACCTTTGGTGTCATCTAGTCGAGTCCTCTCATTAGTAAAGGAGCAAAGTGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR TCA 90 bp CCTAGTAGCTCCCTGTCAATGTTGCTGAGTCATGTACTTAGGGTGAATTTGAGATGCCTTGCTCCACCTTaGCCCAAATGTTCTGAATTG +
Preference number: 4 (lower is better)
Translates to: PSSSLSMLLSHVLRVNLRCLAPP*PKCSEL
Trigger: CAATTCAGAACATTTGGGTCAAGGTGGAGCAAGGCA...TCTCAAATTCACCCTAAGTACATGACTCAGCAACATTGACAGGGAGCTACTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR TCA 90 bp AGACATTTAACTTATCCCCAAACATGTGTCTTGATCTTAGTTTCCACCCAGAGAGAAGGCATCAAGACATaGCCACGCATGGCAGTGTCG +
Preference number: 4 (lower is better)
Translates to: RHLTYPQTCVLILVSTQREGIKT*PRMAVS
Trigger: CGACACTGCCATGCGTGGTCATGTCTTGATGCCTTC...TCTCTGGGTGGAAACTAAGATCAAGACACATGTTTGGGGATAAGTTAAATGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR GCA 90 bp TTCACTGTGCAAAGTAAGGAAGCCAGTCAACACTGGACGATGTTTAGAAAACATCCACTGTCAGTGCCTTaGTCCACCTTGACCCAAATG +
Preference number: 4 (lower is better)
Translates to: FTVQSKEASQHWTMFRKHPLSVP*STLTQM
Trigger: CATTTGGGTCAAGGTGGAGCAAGGCACTGACAGTGG...ATGTTTTCTAAACATCGTCCAGTGTTGACTGGCTTCCTTACTTTGCACAGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR GCA 90 bp TTGGGGATGGCAGAGAGATGGATGGATAATGAGTACAACTGCAAACAGCACTGTAATAGCACTTGGTATTaGTACAGGGTGTGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: LGMAERWMDNEYNCKQHCNSTWY*YRVWVL
Trigger: CAAGACCCACACCCTGTAGCAATACCAAGTGCTATT...ACAGTGCTGTTTGCAGTTGTACTCATTATCCATCCATCTCTCTGCCATCCCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CCA 90 bp CAAGCAACTAAATCACTCAGTTGCATCCAACTTAATTGGACTGACTACATTCAGGTCTATGATCCGTCCTaGAAGCCTGTGGGTGCCATG +
Preference number: 4 (lower is better)
Translates to: QATKSLSCIQLNWTDYIQVYDPS*KPVGAM
Trigger: CATGGCACCCACAGGCTTCCAGGACGGATCATAGAC...CTGAATGTAGTCAGTCCAATTAAGTTGGATGCAACTGAGTGATTTAGTTGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CCA 90 bp CAAGCAACTAAATCACTCAGTTGCATCCAACTTAATTGGACTGACTACATTCAGCTTTGGAGATGCATGTaGCCAGGGGAGACAATGGGG +
Preference number: 4 (lower is better)
Translates to: QATKSLSCIQLNWTDYIQLWRCM*PGETMG
Trigger: CCCCATTGTCTCCCCTGGCCACATGCATCTCCAAAG...CTGAATGTAGTCAGTCCAATTAAGTTGGATGCAACTGAGTGATTTAGTTGCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CCA 90 bp GGGAAGTCCTTCTCCTCCCCCAGGTTTCACTTTGCTCCTTTACTAATGAGAGGAGAAGCCAGTCAACACTaGACGATGTTTAGAAAACAT +
Preference number: 4 (lower is better)
Translates to: GKSFSSPRFHFAPLLMRGEASQH*TMFRKH
Trigger: ATGTTTTCTAAACATCGTCCAGTGTTGACTGGCTTC...TCCTCTCATTAGTAAAGGAGCAAAGTGAAACCTGGGGGAGGAGAAGGACTTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CCA 90 bp CAAGCAACTAAATCACTCAGTTGCATCCAACTTAATTGGACTGACTACATTCAGAGTGAAGAGGCTCTTTaGAGATGCATGTGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: QATKSLSCIQLNWTDYIQSEEAL*RCMWPG
Trigger: CCCTGGCCACATGCATCTCCAAAGAGCCTCTTCACT...CTGAATGTAGTCAGTCCAATTAAGTTGGATGCAACTGAGTGATTTAGTTGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR CAA 72 bp CGCACTGTAGTTGACCTACACAAGTGGCTTCCGCATTaGGACAAAAATCAGTTACTAACAAGTGAACAACAC +
Preference number: 4 (lower is better)
Translates to: RTVVDLHKWLPH*DKNQLLTSEQH
Trigger: GTGTTGTTCACTTGTTAGTAACTGATTTTTGTCCAAATGCGGAAGCCACTTGTGTAGGTCAACTACAGTGCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CCA 90 bp CAAGCAACTAAATCACTCAGTTGCATCCAACTTAATTGGACTGACTACATTCAGTTCTGCAGAGCTCTTTaGGTAGTAAGCAAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: QATKSLSCIQLNWTDYIQFCRAL*VVSKSQ
Trigger: CTGGCTCTTGCTTACTACCCAAAGAGCTCTGCAGAA...CTGAATGTAGTCAGTCCAATTAAGTTGGATGCAACTGAGTGATTTAGTTGCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CCA 90 bp AGACATTTAACTTATCCCCAAACATGTGTCTTGATCTTAGTTTCCACCCAGAGAAGGGATGGATTATGGTaGGAACCCAGGTCTCCTTTA +
Preference number: 4 (lower is better)
Translates to: RHLTYPQTCVLILVSTQRRDGLW*EPRSPL
Trigger: TAAAGGAGACCTGGGTTCCCACCATAATCCATCCCT...TCTCTGGGTGGAAACTAAGATCAAGACACATGTTTGGGGATAAGTTAAATGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR TCA 90 bp GAGCAGGGACTTCACAAAGCTGAATTAATGTGGTTAGTTGTGTTCACTGTGCAAGGGACTTCACAAAGCTaGATTAATGTGGTTAGTTGT +
Preference number: 4 (lower is better)
Translates to: EQGLHKAELMWLVVFTVQGTSQS*INVVSC
Trigger: ACAACTAACCACATTAATTCAGCTTTGTGAAGTCCC...TTGCACAGTGAACACAACTAACCACATTAATTCAGCTTTGTGAAGTCCCTGCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR GCA 90 bp TTATGTAATAGCACTTGGTATTGCTACAGGGTGTGGGTCTTGAACTCGGTCAGGACTAAATCACTCAGTTaGATCCAACTTAATTGGACT +
Preference number: 4 (lower is better)
Translates to: LCNSTWYCYRVWVLNSVRTKSLS*IQLNWT
Trigger: AGTCCAATTAAGTTGGATGCAACTGAGTGATTTAGT...CCTGACCGAGTTCAAGACCCACACCCTGTAGCAATACCAAGTGCTATTACATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284486.9
3UTR CAA 72 bp GCAAAGCATCACGACCATCTTTGGGGTTCAAGTTCATaGACATGTGATCTACTAGGCATTATCAATAATGGT +
Preference number: 4 (lower is better)
Translates to: AKHHDHLWGSSS*TCDLLGIINNG
Trigger: ACCATTATTGATAATGCCTAGTAGATCACATGTCAATGAACTTGAACCCCAAAGATGGTCGTGATGCTTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS CCA 90 bp CAGGGGGAGGCTTGGTGGGTGGCACAGTTGGGTCCCGCTCTGGGATaGCCTCATCCAGGTGCCCGAGGGCATTTCCGGGACAGGAGCCGG +
Preference number: 5 (lower is better)
Translates to: QGEAWWVAQLGPALG*PHPGARGHFRDRSR
Trigger: CCGGCTCCTGTCCCGGAAATGCCCTCGGGCACCTGGATGAGGCCATCCCAGAGCGGGACCCAACTGTGCCACCCACCAAGCCTCCCCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000531804.5
ENST00000534308.1
ENST00000648766.1
CDS CCA 90 bp GGGCGCAGGGGGAGGCTTGGTGGGTGGCACAGTTGGGTCCCGCTCTaGGATGGCCTCATCCAGGTGCCCGAGGGCATTTCCGGGACAGGA +
Preference number: 5 (lower is better)
Translates to: GRRGRLGGWHSWVPL*DGLIQVPEGISGTG
Trigger: TCCTGTCCCGGAAATGCCCTCGGGCACCTGGATGAGGCCATCCCAGAGCGGGACCCAACTGTGCCACCCACCAAGCCTCCCCCTGCGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000531804.5
ENST00000534308.1
ENST00000648766.1
CDS-3UTR CAA 90 bp GAGTCGCCAGTCCCAGGGACCCCTGCCTCCGGGAGACCCACTGGAGTAACTTGGGGCGCAGGGGGAGGCTaGGTGGGTGGCACAGTTGGG +
Preference number: 5 (lower is better)
Translates to: ESPVPGTPASGRPTGVTWGAGGG*VGGTVG
Trigger: CCCAACTGTGCCACCCACCAAGCCTCCCCCTGCGCC...CCAAGTTACTCCAGTGGGTCTCCCGGAGGCAGGGGTCCCTGGGACTGGCGACTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CAA 90 bp GGGGCCCTTGAGTCGCCAGTCCCAGGGACCCCTGCCTCCGGGAGACCCACTGGAGAGCTGTCTGGCCAGTaGCTGGTCCTGCAGCCGCAT +
Preference number: 5 (lower is better)
Translates to: GALESPVPGTPASGRPTGELSGQ*LVLQPH
Trigger: ATGCGGCTGCAGGACCAGCAACTGGCCAGACAGCTC...TCCAGTGGGTCTCCCGGAGGCAGGGGTCCCTGGGACTGGCGACTCAAGGGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS CCA 90 bp GTCTCCAGCCTCAGTTTCTCGGTGAGGGCCTTCAGGCTCCGGAGGTaGTCATCGGGTGGTGCGGCTGCTCCCGCCCCCTCTTCTGCACCC +
Preference number: 5 (lower is better)
Translates to: VSSLSFSVRAFRLRR*SSGGAAAPAPSSAP
Trigger: GGGTGCAGAAGAGGGGGCGGGAGCAGCCGCACCACCCGATGACCACCTCCGGAGCCTGAAGGCCCTCACCGAGAAACTGAGGCTGGAGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000531804.5
ENST00000534308.1
ENST00000648766.1
CDS TCA 90 bp CGCGCAGTGAGCCGCACAGGGCGCCCTCCTGGAGGCTCGGGTCTATaGTCCGTCCTGGAAGCCTGTGGGTGCCATGCTCCACAGAAGGCA +
Preference number: 5 (lower is better)
Translates to: RAVSRTGRPPGGSGL*SVLEACGCHAPQKA
Trigger: TGCCTTCTGTGGAGCATGGCACCCACAGGCTTCCAGGACGGATCATAGACCCGAGCCTCCAGGAGGGCGCCCTGTGCGGCTCACTGCGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000284486.9
ENST00000528111.1
ENST00000528897.1
ENST00000531804.5
ENST00000534308.1
ENST00000648766.1
CDS GCA 90 bp GGTGAGGGCCTTCAGGCTCCGGAGGTGGTCATCGGGTGGTGCGGCTaGTCCCGCCCCCTCTTCTGCACCCACTTCTTCCACGTGGATCTG +
Preference number: 5 (lower is better)
Translates to: GEGLQAPEVVIGWCG*SRPLFCTHFFHVDL
Trigger: CAGATCCACGTGGAAGAAGTGGGTGCAGAAGAGGGGGCGGGAGCAGCCGCACCACCCGATGACCACCTCCGGAGCCTGAAGGCCCTCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000531804.5
ENST00000534308.1
ENST00000648766.1
CDS TCA 90 bp ATTCCAGGTAGGAGGGCCTGCGGGTCTCCAGCCTCAGTTTCTCGGTaGGGGCCTTCAGGCTCCGGAGGTGGTCATCGGGTGGTGCGGCTG +
Preference number: 5 (lower is better)
Translates to: IPGRRACGSPASVSR*GPSGSGGGHRVVRL
Trigger: CAGCCGCACCACCCGATGACCACCTCCGGAGCCTGAAGGCCCTCACCGAGAAACTGAGGCTGGAGACCCGCAGGCCCTCCTACCTGGAAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000531804.5
ENST00000534308.1
ENST00000648766.1
CDS GCA 90 bp TTTCTCGGTGAGGGCCTTCAGGCTCCGGAGGTGGTCATCGGGTGGTaGGGCTGCTCCCGCCCCCTCTTCTGCACCCACTTCTTCCACGTG +
Preference number: 5 (lower is better)
Translates to: FLGEGLQAPEVVIGW*GCSRPLFCTHFFHV
Trigger: CACGTGGAAGAAGTGGGTGCAGAAGAGGGGGCGGGAGCAGCCGCACCACCCGATGACCACCTCCGGAGCCTGAAGGCCCTCACCGAGAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000531804.5
ENST00000534308.1
ENST00000648766.1
CDS CCA 90 bp CAGTTTCTCGGTGAGGGCCTTCAGGCTCCGGAGGTGGTCATCGGGTaGTGCGGCTGCTCCCGCCCCCTCTTCTGCACCCACTTCTTCCAC +
Preference number: 5 (lower is better)
Translates to: QFLGEGLQAPEVVIG*CGCSRPLFCTHFFH
Trigger: GTGGAAGAAGTGGGTGCAGAAGAGGGGGCGGGAGCAGCCGCACCACCCGATGACCACCTCCGGAGCCTGAAGGCCCTCACCGAGAAACTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000531804.5
ENST00000534308.1
ENST00000648766.1
CDS-3UTR CAA 90 bp GGGGCCCTTGAGTCGCCAGTCCCAGGGACCCCTGCCTCCGGGAGACCCACTGGAACCCACTGGAGTAACTaGGCCTCAGCTTCCTCTGAC +
Preference number: 5 (lower is better)
Translates to: GALESPVPGTPASGRPTGTHWSN*ASASSD
Trigger: GTCAGAGGAAGCTGAGGCCAAGTTACTCCAGTGGGT...TCCAGTGGGTCTCCCGGAGGCAGGGGTCCCTGGGACTGGCGACTCAAGGGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS CCA 90 bp GCGCCCTCCTGGAGGCTCGGGTCTATGATCCGTCCTGGAAGCCTGTaGGTGCCATGCTCCACAGAAGGCAGGAACAGACAGCGTCGCAGG +
Preference number: 5 (lower is better)
Translates to: APSWRLGSMIRPGSL*VPCSTEGRNRQRRR
Trigger: CCTGCGACGCTGTCTGTTCCTGCCTTCTGTGGAGCATGGCACCCACAGGCTTCCAGGACGGATCATAGACCCGAGCCTCCAGGAGGGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000284486.9
ENST00000528111.1
ENST00000528897.1
ENST00000531804.5
ENST00000534308.1
ENST00000648766.1
CDS GCA 90 bp CCGGAGGTGGTCATCGGGTGGTGCGGCTGCTCCCGCCCCCTCTTCTaGACCCACTTCTTCCACGTGGATCTGGGGCACAGACATTCTACA +
Preference number: 5 (lower is better)
Translates to: PEVVIGWCGCSRPLF*THFFHVDLGHRHST
Trigger: TGTAGAATGTCTGTGCCCCAGATCCACGTGGAAGAAGTGGGTGCAGAAGAGGGGGCGGGAGCAGCCGCACCACCCGATGACCACCTCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000531804.5
ENST00000534308.1
ENST00000648766.1
CDS CCA 90 bp TTGTTGATGTCGCCACGCAGGCGCATGAGCTGTCTGGCCAGTTGCTaGTCCTGCAGCCGCATCTCCGTGTGCAGAAGAGTGGTCCCCGGA +
Preference number: 5 (lower is better)
Translates to: LLMSPRRRMSCLASC*SCSRISVCRRVVPG
Trigger: TCCGGGGACCACTCTTCTGCACACGGAGATGCGGCTGCAGGACCAGCAACTGGCCAGACAGCTCATGCGCCTGCGTGGCGACATCAACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531564.1
CDS CCA 90 bp AGGAAGAAGGCCCAGAGCTCTCTCTTCTCGGGAAGGGCAGGTGGCTaGAGACCCTGTGGGAGGGATGAGAACCGCATCAGTCCCGATCCC +
Preference number: 5 (lower is better)
Translates to: RKKAQSSLFSGRAGG*RPCGRDENRISPDP
Trigger: GGGATCGGGACTGATGCGGTTCTCATCCCTCCCACAGGGTCTCCAGCCACCTGCCCTTCCCGAGAAGAGAGAGCTCTGGGCCTTCTTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534308.1
CDS-3UTR CAA 90 bp CATGACCACGCATGGCAGTGTCGGTGGAGAGTTTGCGTTTTACACCCAGCGATGGGCGCAGGGGGAGGCTaGGTGGGTGGCACAGTTGGG +
Preference number: 5 (lower is better)
Translates to: HDHAWQCRWRVCVLHPAMGAGGG*VGGTVG
Trigger: CCCAACTGTGCCACCCACCAAGCCTCCCCCTGCGCC...CATCGCTGGGTGTAAAACGCAAACTCTCCACCGACACTGCCATGCGTGGTCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CAA 90 bp GAGTCGCCAGTCCCAGGGACCCCTGCCTCCGGGAGACCCACTGGAGTAACTTGGGCCACTGTCAGTGCCTaGCTCCACCTTGACCCAAAT +
Preference number: 5 (lower is better)
Translates to: ESPVPGTPASGRPTGVTWATVSA*LHLDPN
Trigger: ATTTGGGTCAAGGTGGAGCAAGGCACTGACAGTGGC...CCAAGTTACTCCAGTGGGTCTCCCGGAGGCAGGGGTCCCTGGGACTGGCGACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS TCA 90 bp GGTCGGCCAGCTCATCCCGCTCCTCCAGCTCGTAGGTGGCATCGTTaGGCATCCTCCTGTGGAGGCGGCAGGTGTGTTCGATTTTCAGCT +
Preference number: 5 (lower is better)
Translates to: GRPAHPAPPARRWHR*ASSCGGGRCVRFSA
Trigger: AGCTGAAAATCGAACACACCTGCCGCCTCCACAGGAGGATGCTCAACGATGCCACCTACGAGCTGGAGGAGCGGGATGAGCTGGCCGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284486.9
ENST00000527445.1
ENST00000528897.1
ENST00000531564.1
ENST00000534308.1
CDS GCA 90 bp TGGAGGCTCGGGTCTATGATCCGTCCTGGAAGCCTGTGGGTGCCATaGTCCACAGAAGGCAGGAACAGACAGCGTCGCAGGAATCTCGGG +
Preference number: 5 (lower is better)
Translates to: WRLGSMIRPGSLWVP*STEGRNRQRRRNLG
Trigger: CCCGAGATTCCTGCGACGCTGTCTGTTCCTGCCTTCTGTGGAGCATGGCACCCACAGGCTTCCAGGACGGATCATAGACCCGAGCCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000284486.9
ENST00000528111.1
ENST00000528897.1
ENST00000531804.5
ENST00000534308.1
ENST00000648766.1
CDS GCA 90 bp AGCTTGTTGATGTCGCCACGCAGGCGCATGAGCTGTCTGGCCAGTTaGTGGTCCTGCAGCCGCATCTCCGTCAGTTCCTTCCTGAGCCAG +
Preference number: 5 (lower is better)
Translates to: SLLMSPRRRMSCLAS*WSCSRISVSSFLSQ
Trigger: CTGGCTCAGGAAGGAACTGACGGAGATGCGGCTGCAGGACCAGCAACTGGCCAGACAGCTCATGCGCCTGCGTGGCGACATCAACAAGCT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS CCA 90 bp TTGTTGATGTCGCCACGCAGGCGCATGAGCTGTCTGGCCAGTTGCTaGTCCTGCAGCCGCATCTCCGTCAGTTCCTTCCTGAGCCAGGCT +
Preference number: 5 (lower is better)
Translates to: LLMSPRRRMSCLASC*SCSRISVSSFLSQA
Trigger: AGCCTGGCTCAGGAAGGAACTGACGGAGATGCGGCTGCAGGACCAGCAACTGGCCAGACAGCTCATGCGCCTGCGTGGCGACATCAACAA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CAA 90 bp GAGTCGCCAGTCCCAGGGACCCCTGCCTCCGGGAGACCCACTGGAGTAACTTGGCCTTTAACATCTTGGTaGGAGCGGCCCTTCTGCAGA +
Preference number: 5 (lower is better)
Translates to: ESPVPGTPASGRPTGVTWPLTSW*ERPFCR
Trigger: TCTGCAGAAGGGCCGCTCCAACCAAGATGTTAAAGG...CCAAGTTACTCCAGTGGGTCTCCCGGAGGCAGGGGTCCCTGGGACTGGCGACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS TCA 90 bp CGTCGCAGGAATCTCGGGGCAGCCTGTGCCAAGGTCTATCTGTCCTaGACGCACTCGAAGACCAGACTGGCAGGAAGAAGGCCCAGAGCT +
Preference number: 5 (lower is better)
Translates to: RRRNLGAACAKVYLS*THSKTRLAGRRPRA
Trigger: AGCTCTGGGCCTTCTTCCTGCCAGTCTGGTCTTCGAGTGCGTTCAGGACAGATAGACCTTGGCACAGGCTGCCCCGAGATTCCTGCGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000284486.9
ENST00000528111.1
ENST00000528897.1
ENST00000531804.5
ENST00000534308.1
ENST00000648766.1
CDS GCA 90 bp AGAAGGCAGGAACAGACAGCGTCGCAGGAATCTCGGGGCAGCCTGTaGCAAGGTCTATCTGTCCTGAACGCACTCGAAGACCAGACTGGC +
Preference number: 5 (lower is better)
Translates to: RRQEQTASQESRGSL*QGLSVLNALEDQTG
Trigger: GCCAGTCTGGTCTTCGAGTGCGTTCAGGACAGATAGACCTTGGCACAGGCTGCCCCGAGATTCCTGCGACGCTGTCTGTTCCTGCCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000284486.9
ENST00000528111.1
ENST00000528897.1
ENST00000531804.5
ENST00000534308.1
ENST00000648766.1
CDS CCA 90 bp CCTGTGCCAAGGTCTATCTGTCCTGAACGCACTCGAAGACCAGACTaGCAGGAAGAAGGCCCAGAGCTCTCTCTTCTCGGGAAGGGCAGG +
Preference number: 5 (lower is better)
Translates to: PVPRSICPERTRRPD*QEEGPELSLLGKGR
Trigger: CCTGCCCTTCCCGAGAAGAGAGAGCTCTGGGCCTTCTTCCTGCCAGTCTGGTCTTCGAGTGCGTTCAGGACAGATAGACCTTGGCACAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000284486.9
ENST00000528111.1
ENST00000528897.1
ENST00000531804.5
ENST00000534308.1
ENST00000648766.1
CDS-3UTR CAA 90 bp AAACAGGAACGTGACCGTGGAGGGATGGATTATGGTGGGAACCCAGGTCTCCTTTGGTGGGTGGCACAGTaGGGTCCCGCTCTGGGATGG +
Preference number: 5 (lower is better)
Translates to: KQERDRGGMDYGGNPGLLWWVAQ*GPALGW
Trigger: CCATCCCAGAGCGGGACCCAACTGTGCCACCCACCA...AAGGAGACCTGGGTTCCCACCATAATCCATCCCTCCACGGTCACGTTCCTGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CAA 90 bp GTCCCAGGGACCCCTGCCTCCGGGAGACCCACTGGAGTAACTTGGCCTCAGCTTTGTTCGATTTTCAGCTaGTTGATGTCGCCACGCAGG +
Preference number: 5 (lower is better)
Translates to: VPGTPASGRPTGVTWPQLCSIFS*LMSPRR
Trigger: CCTGCGTGGCGACATCAACAAGCTGAAAATCGAACA...AAGCTGAGGCCAAGTTACTCCAGTGGGTCTCCCGGAGGCAGGGGTCCCTGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CAA 90 bp TCTGGCCGAGGGACCCCTGCCATGCCGTATGACCCCAGACTGACCTCCCTAACCGAGAACCTCCGAGAGTaGATGTTCATCTTGGTCACG +
Preference number: 5 (lower is better)
Translates to: SGRGTPAMPYDPRLTSLTENLRE*MFILVT
Trigger: CGTGACCAAGATGAACATCAACTCTCGGAGGTTCTC...GGTTAGGGAGGTCAGTCTGGGGTCATACGGCATGGCAGGGGTCCCTCGGCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CAA 90 bp GAGCGGCCCTTCTGCAGAGCTCTTTGGGTAGTAAGCAAGAGCCAGTCACAGAGATTTCCCCCAAGGCCCTaGCGGGACAGCCTTCTGCAA +
Preference number: 5 (lower is better)
Translates to: ERPFCRALWVVSKSQSQRFPPRP*RDSLLQ
Trigger: TTGCAGAAGGCTGTCCCGCAAGGGCCTTGGGGGAAA...TCTCTGTGACTGGCTCTTGCTTACTACCCAAAGAGCTCTGCAGAAGGGCCGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284486.9
ENST00000534308.1
CDS-3UTR CAA 90 bp TTGAACTCGGTCAGGCATCGTCAAGCCTGCCCAGGCCCTCCAGGCCTCTTTGATTGGGGACATCTGTGCTaGTTGCACCCAAGCTACGCT +
Preference number: 5 (lower is better)
Translates to: LNSVRHRQACPGPPGLFDWGHLC*LHPSYA
Trigger: AGCGTAGCTTGGGTGCAACAAGCACAGATGTCCCCA...ATCAAAGAGGCCTGGAGGGCCTGGGCAGGCTTGACGATGCCTGACCGAGTTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS GCA 90 bp ATGGGACTTAGACAGCAGTGTTCAGCTCCCCCGATGATCCGAGTGTaGAGCCGGGGTGGAGAACCACTGTCTCCAGATGCAGACACTAGA +
Preference number: 5 (lower is better)
Translates to: MGLRQQCSAPPMIRV*SRGGEPLSPDADTR
Trigger: TCTAGTGTCTGCATCTGGAGACAGTGGTTCTCCACCCCGGCTGCACACTCGGATCATCGGGGGAGCTGAACACTGCTGTCTAAGTCCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528111.1
ENST00000531804.5
CDS-3UTR CAA 90 bp GTGTGCGGGTTTGGCAAAGCATCACGACCATCTTTGGGGTTCAAGTTCATTGACTGGTGGGTGGCACAGTaGGGTCCCGCTCTGGGATGG +
Preference number: 5 (lower is better)
Translates to: VCGFGKASRPSLGFKFIDWWVAQ*GPALGW
Trigger: CCATCCCAGAGCGGGACCCAACTGTGCCACCCACCA...GTCAATGAACTTGAACCCCAAAGATGGTCGTGATGCTTTGCCAAACCCGCACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CAA 90 bp AGTGATTCCAGGAAACAGGAACGTGACCGTGGAGGGATGGATTATGGTGGGAACGAGCTGTCTGGCCAGTaGCTGGTCCTGCAGCCGCAT +
Preference number: 5 (lower is better)
Translates to: SDSRKQERDRGGMDYGGNELSGQ*LVLQPH
Trigger: ATGCGGCTGCAGGACCAGCAACTGGCCAGACAGCTC...GTTCCCACCATAATCCATCCCTCCACGGTCACGTTCCTGTTTCCTGGAATCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CAA 90 bp GGAAACAGGAACGTGACCGTGGAGGGATGGATTATGGTGGGAACCCAGGTCTCCTCGATTTTCAGCTTGTaGATGTCGCCACGCAGGCGC +
Preference number: 5 (lower is better)
Translates to: GNRNVTVEGWIMVGTQVSSIFSL*MSPRRR
Trigger: GCGCCTGCGTGGCGACATCAACAAGCTGAAAATCGA...GGAGACCTGGGTTCCCACCATAATCCATCCCTCCACGGTCACGTTCCTGTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CAA 90 bp CGTGAGACAGGCACATCTGACATGCCTAATTTCCCCCAAGGCCCTTGCGGGACAGTCACGCCAATAAGCTaGAGTGGTGTGGAGAGGCTG +
Preference number: 5 (lower is better)
Translates to: RETGTSDMPNFPQGPCGTVTPIS*SGVERL
Trigger: CAGCCTCTCCACACCACTCAAGCTTATTGGCGTGAC...TGTCCCGCAAGGGCCTTGGGGGAAATTAGGCATGTCAGATGTGCCTGTCTCACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284486.9
ENST00000534308.1
CDS-3UTR CAA 90 bp GGAAACAGGAACGTGACCGTGGAGGGATGGATTATGGTGGGAACCCAGGTCTCCGTCACGCCAATAAGCTaGAGTGGTGTGGAGAGGCTG +
Preference number: 5 (lower is better)
Translates to: GNRNVTVEGWIMVGTQVSVTPIS*SGVERL
Trigger: CAGCCTCTCCACACCACTCAAGCTTATTGGCGTGAC...GGAGACCTGGGTTCCCACCATAATCCATCCCTCCACGGTCACGTTCCTGTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CAA 90 bp GTCCCAGGGACCCCTGCCTCCGGGAGACCCACTGGAGTAACTTGGCCTCAGCTTGAGTTGATGTTCATCTaGGTCACGCCAATAAGCTTG +
Preference number: 5 (lower is better)
Translates to: VPGTPASGRPTGVTWPQLELMFI*VTPISL
Trigger: CAAGCTTATTGGCGTGACCAAGATGAACATCAACTC...AAGCTGAGGCCAAGTTACTCCAGTGGGTCTCCCGGAGGCAGGGGTCCCTGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CAA 90 bp TTGAACTCGGTCAGGCATCGTCAAGCCTGCCCAGGCCCTCCAGGCCTCTTTGATGTGTCGGTGGAGAGTTaGCGTTTTACACCCAGCGAT +
Preference number: 5 (lower is better)
Translates to: LNSVRHRQACPGPPGLFDVSVES*RFTPSD
Trigger: ATCGCTGGGTGTAAAACGCAAACTCTCCACCGACAC...ATCAAAGAGGCCTGGAGGGCCTGGGCAGGCTTGACGATGCCTGACCGAGTTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CAA 90 bp ATGACCACGCATGGCAGTGTCGGTGGAGAGTTTGCGTTTTACACCCAGCGATGCTCGATTTTCAGCTTGTaGATGTCGCCACGCAGGCGC +
Preference number: 5 (lower is better)
Translates to: MTTHGSVGGEFAFYTQRCSIFSL*MSPRRR
Trigger: GCGCCTGCGTGGCGACATCAACAAGCTGAAAATCGA...GCATCGCTGGGTGTAAAACGCAAACTCTCCACCGACACTGCCATGCGTGGTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CAA 90 bp GGAAAATGCTTTCAGGACCTGCCTGGTTCAGTCACCAGTGGTCTCCCAGGCTGTACCCACTGGAGTAACTaGGCCTCAGCTTCCTCTGAC +
Preference number: 5 (lower is better)
Translates to: GKCFQDLPGSVTSGLPGCTHWSN*ASASSD
Trigger: GTCAGAGGAAGCTGAGGCCAAGTTACTCCAGTGGGT...ACAGCCTGGGAGACCACTGGTGACTGAACCAGGCAGGTCCTGAAAGCATTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CAA 90 bp CCGTGCGTAGACCATGGGACAGTGATTAGTGACACATGCCCTGTGGGGCCACTGCTTCTGCAGAGCTCTTaGGGTAGTAAGCAAGAGCCA +
Preference number: 5 (lower is better)
Translates to: PCVDHGTVISDTCPVGPLLLQSS*GSKQEP
Trigger: TGGCTCTTGCTTACTACCCAAAGAGCTCTGCAGAAG...CAGTGGCCCCACAGGGCATGTGTCACTAATCACTGTCCCATGGTCTACGCACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CAA 90 bp GGAGCGGCCCTTCTGCAGAGCTCTTTGGGTAGTAAGCAAGAGCCAGTCACAGAGGTCTCCTTTAACATCTaGGTTGGAGCGGCCCTTCTG +
Preference number: 5 (lower is better)
Translates to: GAALLQSSLGSKQEPVTEVSFNI*VGAALL
Trigger: CAGAAGGGCCGCTCCAACCAAGATGTTAAAGGAGAC...CTCTGTGACTGGCTCTTGCTTACTACCCAAAGAGCTCTGCAGAAGGGCCGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CAA 90 bp GGAGCGGCCCTTCTGCAGAGCTCTTTGGGTAGTAAGCAAGAGCCAGTCACAGAGGGACATCTGTGCTTGTaGCACCCAAGCTACGCTAGT +
Preference number: 5 (lower is better)
Translates to: GAALLQSSLGSKQEPVTEGHLCL*HPSYAS
Trigger: ACTAGCGTAGCTTGGGTGCAACAAGCACAGATGTCC...CTCTGTGACTGGCTCTTGCTTACTACCCAAAGAGCTCTGCAGAAGGGCCGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CAA 90 bp GCGGCCCTTCTGCAGAGCTCTTTGGGTAGTAAGCAAGAGCCAGTCACAGAGACATGGCAGTGTGCGGGTTaGGCAAAGCATCACGACCAT +
Preference number: 5 (lower is better)
Translates to: AALLQSSLGSKQEPVTETWQCAG*AKHHDH
Trigger: ATGGTCGTGATGCTTTGCCAAACCCGCACACTGCCA...TGTCTCTGTGACTGGCTCTTGCTTACTACCCAAAGAGCTCTGCAGAAGGGCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CAA 90 bp GGAGCGGCCCTTCTGCAGAGCTCTTTGGGTAGTAAGCAAGAGCCAGTCACAGAGTGTTCGATTTTCAGCTaGTTGATGTCGCCACGCAGG +
Preference number: 5 (lower is better)
Translates to: GAALLQSSLGSKQEPVTECSIFS*LMSPRR
Trigger: CCTGCGTGGCGACATCAACAAGCTGAAAATCGAACA...CTCTGTGACTGGCTCTTGCTTACTACCCAAAGAGCTCTGCAGAAGGGCCGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CAA 90 bp AAACAGGAACGTGACCGTGGAGGGATGGATTATGGTGGGAACCCAGGTCTCCTTGTCACGCCAATAAGCTaGAGTGGTGTGGAGAGGCTG +
Preference number: 5 (lower is better)
Translates to: KQERDRGGMDYGGNPGLLVTPIS*SGVERL
Trigger: CAGCCTCTCCACACCACTCAAGCTTATTGGCGTGAC...AAGGAGACCTGGGTTCCCACCATAATCCATCCCTCCACGGTCACGTTCCTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CAA 90 bp GGAGCGGCCCTTCTGCAGAGCTCTTTGGGTAGTAAGCAAGAGCCAGTCACAGAGGAGAACCTCCGAGAGTaGATGTTCATCTTGGTCACG +
Preference number: 5 (lower is better)
Translates to: GAALLQSSLGSKQEPVTEENLRE*MFILVT
Trigger: CGTGACCAAGATGAACATCAACTCTCGGAGGTTCTC...CTCTGTGACTGGCTCTTGCTTACTACCCAAAGAGCTCTGCAGAAGGGCCGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CAA 90 bp CGTGAGACAGGCACATCTGACATGCCTAATTTCCCCCAAGGCCCTTGCGGGACAGAGAACCTCCGAGAGTaGATGTTCATCTTGGTCACG +
Preference number: 5 (lower is better)
Translates to: RETGTSDMPNFPQGPCGTENLRE*MFILVT
Trigger: CGTGACCAAGATGAACATCAACTCTCGGAGGTTCTC...TGTCCCGCAAGGGCCTTGGGGGAAATTAGGCATGTCAGATGTGCCTGTCTCACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284486.9
ENST00000534308.1
CDS-3UTR CAA 90 bp AAACAGGAACGTGACCGTGGAGGGATGGATTATGGTGGGAACCCAGGTCTCCTTACCCACTGGAGTAACTaGGCCTCAGCTTCCTCTGAC +
Preference number: 5 (lower is better)
Translates to: KQERDRGGMDYGGNPGLLTHWSN*ASASSD
Trigger: GTCAGAGGAAGCTGAGGCCAAGTTACTCCAGTGGGT...AAGGAGACCTGGGTTCCCACCATAATCCATCCCTCCACGGTCACGTTCCTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CAA 90 bp GGAAACAGGAACGTGACCGTGGAGGGATGGATTATGGTGGGAACCCAGGTCTCCCTTCTGCAGAGCTCTTaGGGTAGTAAGCAAGAGCCA +
Preference number: 5 (lower is better)
Translates to: GNRNVTVEGWIMVGTQVSLLQSS*GSKQEP
Trigger: TGGCTCTTGCTTACTACCCAAAGAGCTCTGCAGAAG...GGAGACCTGGGTTCCCACCATAATCCATCCCTCCACGGTCACGTTCCTGTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CAA 90 bp AAACAGGAACGTGACCGTGGAGGGATGGATTATGGTGGGAACCCAGGTCTCCTTTCTGGGCTCCCTAGATaGTCTTTCCAGAGAGGGCAG +
Preference number: 5 (lower is better)
Translates to: KQERDRGGMDYGGNPGLLSGLPR*SFQRGQ
Trigger: CTGCCCTCTCTGGAAAGACAATCTAGGGAGCCCAGA...AAGGAGACCTGGGTTCCCACCATAATCCATCCCTCCACGGTCACGTTCCTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CAA 90 bp TCCTTATCTCAGGATTCTACGGGTCTGGCCGAGGGACCCCTGCCATGCCGTATGGCATCACGACCATCTTaGGGGTTCAAGTTCATTGAC +
Preference number: 5 (lower is better)
Translates to: SLSQDSTGLAEGPLPCRMASRPS*GFKFID
Trigger: GTCAATGAACTTGAACCCCAAAGATGGTCGTGATGC...CATACGGCATGGCAGGGGTCCCTCGGCCAGACCCGTAGAATCCTGAGATAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CAA 90 bp CCTCAAGGGCTTATCTGGAAAGAGGTTGGCAGGAAAGGAATGCGTCTTCAGGACTACACCCAGCGATGCTaGGGGATGGCAGAGAGATGG +
Preference number: 5 (lower is better)
Translates to: PQGLIWKEVGRKGMRLQDYTQRC*GMAERW
Trigger: CCATCTCTCTGCCATCCCCAAGCATCGCTGGGTGTA...GTCCTGAAGACGCATTCCTTTCCTGCCAACCTCTTTCCAGATAAGCCCTTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CAA 90 bp CCTAGTAGCTCCCTGTCAATGTTGCTGAGTCATGTACTTAGGGTGAATTTGAGATGGTGGGTGGCACAGTaGGGTCCCGCTCTGGGATGG +
Preference number: 5 (lower is better)
Translates to: PSSSLSMLLSHVLRVNLRWWVAQ*GPALGW
Trigger: CCATCCCAGAGCGGGACCCAACTGTGCCACCCACCA...TCTCAAATTCACCCTAAGTACATGACTCAGCAACATTGACAGGGAGCTACTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284486.9
ENST00000534308.1
CDS-3UTR CAA 90 bp TCCTTATCTCAGGATTCTACGGGTCTGGCCGAGGGACCCCTGCCATGCCGTATGGAGTTGATGTTCATCTaGGTCACGCCAATAAGCTTG +
Preference number: 5 (lower is better)
Translates to: SLSQDSTGLAEGPLPCRMELMFI*VTPISL
Trigger: CAAGCTTATTGGCGTGACCAAGATGAACATCAACTC...CATACGGCATGGCAGGGGTCCCTCGGCCAGACCCGTAGAATCCTGAGATAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CAA 90 bp GCGGCCCTTCTGCAGAGCTCTTTGGGTAGTAAGCAAGAGCCAGTCACAGAGACACTTCTGCAGAGCTCTTaGGGTAGTAAGCAAGAGCCA +
Preference number: 5 (lower is better)
Translates to: AALLQSSLGSKQEPVTETLLQSS*GSKQEP
Trigger: TGGCTCTTGCTTACTACCCAAAGAGCTCTGCAGAAG...TGTCTCTGTGACTGGCTCTTGCTTACTACCCAAAGAGCTCTGCAGAAGGGCCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS GCA 90 bp GTCTCATTTTCTTCATCCCAGACCTCATCAAGCACCTTTCCTAGATaGCCGGGGCTGGAAGCGTCTTTCAAAGGGCTCCAGTCTGCCATT +
Preference number: 5 (lower is better)
Translates to: VSFSSSQTSSSTFPR*PGLEASFKGLQSAI
Trigger: AATGGCAGACTGGAGCCCTTTGAAAGACGCTTCCAGCCCCGGGCATCTAGGAAAGGTGCTTGATGAGGTCTGGGATGAAGAAAATGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531804.5
CDS CCA 90 bp CACCTCCAGCTCTGCTTGGAGCAAGCGAGAATCCCCCTGAGGAACTaGATTCTGATTCAATTGGTCGAGAGATGGGACTTAGACAGCAGT +
Preference number: 5 (lower is better)
Translates to: HLQLCLEQARIPLRN*ILIQLVERWDLDSS
Trigger: ACTGCTGTCTAAGTCCCATCTCTCGACCAATTGAATCAGAATCCAGTTCCTCAGGGGGATTCTCGCTTGCTCCAAGCAGAGCTGGAGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528111.1
ENST00000531804.5
CDS-3UTR CAA 90 bp TTGGGAATCCCAGTTCATAGCACCAGTGATTCCAGGAAACAGGAACGTGACCGTTCGATTTTCAGCTTGTaGATGTCGCCACGCAGGCGC +
Preference number: 5 (lower is better)
Translates to: LGIPVHSTSDSRKQERDRSIFSL*MSPRRR
Trigger: GCGCCTGCGTGGCGACATCAACAAGCTGAAAATCGA...ACGGTCACGTTCCTGTTTCCTGGAATCACTGGTGCTATGAACTGGGATTCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CAA 90 bp GGAGCGGCCCTTCTGCAGAGCTCTTTGGGTAGTAAGCAAGAGCCAGTCACAGAGGAGTTGATGTTCATCTaGGTCACGCCAATAAGCTTG +
Preference number: 5 (lower is better)
Translates to: GAALLQSSLGSKQEPVTEELMFI*VTPISL
Trigger: CAAGCTTATTGGCGTGACCAAGATGAACATCAACTC...CTCTGTGACTGGCTCTTGCTTACTACCCAAAGAGCTCTGCAGAAGGGCCGCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CAA 90 bp AGTGATTCCAGGAAACAGGAACGTGACCGTGGAGGGATGGATTATGGTGGGAACGTCTCCTTTAACATCTaGGTTGGAGCGGCCCTTCTG +
Preference number: 5 (lower is better)
Translates to: SDSRKQERDRGGMDYGGNVSFNI*VGAALL
Trigger: CAGAAGGGCCGCTCCAACCAAGATGTTAAAGGAGAC...GTTCCCACCATAATCCATCCCTCCACGGTCACGTTCCTGTTTCCTGGAATCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CAA 90 bp GCGGCCCTTCTGCAGAGCTCTTTGGGTAGTAAGCAAGAGCCAGTCACAGAGACAAGCTCCCTGTCAATGTaGCTGAGTCATGTACTTAGG +
Preference number: 5 (lower is better)
Translates to: AALLQSSLGSKQEPVTETSSLSM*LSHVLR
Trigger: CCTAAGTACATGACTCAGCAACATTGACAGGGAGCT...TGTCTCTGTGACTGGCTCTTGCTTACTACCCAAAGAGCTCTGCAGAAGGGCCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284486.9
ENST00000534308.1
CDS-3UTR CAA 90 bp GGAAACAGGAACGTGACCGTGGAGGGATGGATTATGGTGGGAACCCAGGTCTCCGATCATTCATTTGCATaGTCCTACTCTCAGCCCACA +
Preference number: 5 (lower is better)
Translates to: GNRNVTVEGWIMVGTQVSDHSFA*SYSQPT
Trigger: TGTGGGCTGAGAGTAGGACAATGCAAATGAATGATC...GGAGACCTGGGTTCCCACCATAATCCATCCCTCCACGGTCACGTTCCTGTTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CAA 90 bp TTGGGGATGGCAGAGAGATGGATGGATAATGAGTACAACTGCAAACAGCACTGTGCCCTCCAGGCCTCTTaGATAGCTACTGAGCCCCTG +
Preference number: 5 (lower is better)
Translates to: LGMAERWMDNEYNCKQHCALQAS*IATEPL
Trigger: CAGGGGCTCAGTAGCTATCAAAGAGGCCTGGAGGGC...ACAGTGCTGTTTGCAGTTGTACTCATTATCCATCCATCTCTCTGCCATCCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CAA 90 bp TTGGGAATCCCAGTTCATAGCACCAGTGATTCCAGGAAACAGGAACGTGACCGTCCTTTAACATCTTGGTaGGAGCGGCCCTTCTGCAGA +
Preference number: 5 (lower is better)
Translates to: LGIPVHSTSDSRKQERDRPLTSW*ERPFCR
Trigger: TCTGCAGAAGGGCCGCTCCAACCAAGATGTTAAAGG...ACGGTCACGTTCCTGTTTCCTGGAATCACTGGTGCTATGAACTGGGATTCCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CAA 90 bp TTGGGAATCCCAGTTCATAGCACCAGTGATTCCAGGAAACAGGAACGTGACCGTGTCTCCTTTAACATCTaGGTTGGAGCGGCCCTTCTG +
Preference number: 5 (lower is better)
Translates to: LGIPVHSTSDSRKQERDRVSFNI*VGAALL
Trigger: CAGAAGGGCCGCTCCAACCAAGATGTTAAAGGAGAC...ACGGTCACGTTCCTGTTTCCTGGAATCACTGGTGCTATGAACTGGGATTCCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CAA 90 bp TTCACTGTGCAAAGTAAGGAAGCCAGTCAACACTGGACGATGTTTAGAAAACATGAGCTGTCTGGCCAGTaGCTGGTCCTGCAGCCGCAT +
Preference number: 5 (lower is better)
Translates to: FTVQSKEASQHWTMFRKHELSGQ*LVLQPH
Trigger: ATGCGGCTGCAGGACCAGCAACTGGCCAGACAGCTC...ATGTTTTCTAAACATCGTCCAGTGTTGACTGGCTTCCTTACTTTGCACAGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CAA 90 bp CTTTGGGAATCCCAGTTCATAGCACCAGTGATTCCAGGAAACAGGAACGTGACCTGTTCGATTTTCAGCTaGTTGATGTCGCCACGCAGG +
Preference number: 5 (lower is better)
Translates to: LWESQFIAPVIPGNRNVTCSIFS*LMSPRR
Trigger: CCTGCGTGGCGACATCAACAAGCTGAAAATCGAACA...GGTCACGTTCCTGTTTCCTGGAATCACTGGTGCTATGAACTGGGATTCCCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS-3UTR CAA 90 bp CACGTGAGACAGGCACATCTGACATGCCTAATTTCCCCCAAGGCCCTTGCGGGAGTACTTAGGGTGAATTaGAGACAATACTTAGAGGAC +
Preference number: 5 (lower is better)
Translates to: HVRQAHLTCLISPKALAGVLRVN*RQYLED
Trigger: GTCCTCTAAGTATTGTCTCAAATTCACCCTAAGTAC...TCCCGCAAGGGCCTTGGGGGAAATTAGGCATGTCAGATGTGCCTGTCTCACGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284486.9
ENST00000534308.1
CDS-3UTR CAA 90 bp CTTTGGGAATCCCAGTTCATAGCACCAGTGATTCCAGGAAACAGGAACGTGACCTGCTGGGGTCTTAACTaGCTGATCCTCAAGCCTGTT +
Preference number: 5 (lower is better)
Translates to: LWESQFIAPVIPGNRNVTCWGLN*LILKPV
Trigger: AACAGGCTTGAGGATCAGCAAGTTAAGACCCCAGCA...GGTCACGTTCCTGTTTCCTGGAATCACTGGTGCTATGAACTGGGATTCCCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CAA 90 bp GGCTCCCTAGATTGTCTTTCCAGAGAGGGCAGTAAGGTGACACCACCAGAATCCTGGGGTTCAAGTTCATaGACATGTGATCTACTAGGC +
Preference number: 5 (lower is better)
Translates to: GSLDCLSREGSKVTPPESWGSSS*TCDLLG
Trigger: GCCTAGTAGATCACATGTCAATGAACTTGAACCCCA...GGATTCTGGTGGTGTCACCTTACTGCCCTCTCTGGAAAGACAATCTAGGGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CAA 90 bp TTGGGGATGGCAGAGAGATGGATGGATAATGAGTACAACTGCAAACAGCACTGTTACAGGGTGTGGGTCTaGAACTCGGTCAGGCATCGT +
Preference number: 5 (lower is better)
Translates to: LGMAERWMDNEYNCKQHCYRVWV*NSVRHR
Trigger: ACGATGCCTGACCGAGTTCAAGACCCACACCCTGTA...ACAGTGCTGTTTGCAGTTGTACTCATTATCCATCCATCTCTCTGCCATCCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CAA 90 bp TGGGGACATCTGTGCTTGTTGCACCCAAGCTACGCTAGTGCCCCCATCACATGTAAGTGGCTTCCGCATTaGGACAAAAATCAGTTACTA +
Preference number: 5 (lower is better)
Translates to: WGHLCLLHPSYASAPITCKWLPH*DKNQLL
Trigger: TAGTAACTGATTTTTGTCCAAATGCGGAAGCCACTT...ACATGTGATGGGGGCACTAGCGTAGCTTGGGTGCAACAAGCACAGATGTCCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CAA 90 bp CAAGCAACTAAATCACTCAGTTGCATCCAACTTAATTGGACTGACTACATTCAGTTTCCCCCAAGGCCCTaGCGGGACAGCCTTCTGCAA +
Preference number: 5 (lower is better)
Translates to: QATKSLSCIQLNWTDYIQFPPRP*RDSLLQ
Trigger: TTGCAGAAGGCTGTCCCGCAAGGGCCTTGGGGGAAA...CTGAATGTAGTCAGTCCAATTAAGTTGGATGCAACTGAGTGATTTAGTTGCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CAA 90 bp GAGCAGGGACTTCACAAAGCTGAATTAATGTGGTTAGTTGTGTTCACTGTGCAAAGGACTTGGCAGTGTTaGTGCAGAGCTCTGAGGAAG +
Preference number: 5 (lower is better)
Translates to: EQGLHKAELMWLVVFTVQRTWQC*CRALRK
Trigger: CTTCCTCAGAGCTCTGCACAAACACTGCCAAGTCCT...TTGCACAGTGAACACAACTAACCACATTAATTCAGCTTTGTGAAGTCCCTGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CAA 90 bp GAGCAGGGACTTCACAAAGCTGAATTAATGTGGTTAGTTGTGTTCACTGTGCAAGAGGTTAGGCCAATGTaGCTGCTGACTCATAGACCC +
Preference number: 5 (lower is better)
Translates to: EQGLHKAELMWLVVFTVQEVRPM*LLTHRP
Trigger: GGGTCTATGAGTCAGCAGCAACATTGGCCTAACCTC...TTGCACAGTGAACACAACTAACCACATTAATTCAGCTTTGTGAAGTCCCTGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CAA 90 bp TTGGGAATCCCAGTTCATAGCACCAGTGATTCCAGGAAACAGGAACGTGACCGTGTACTTAGGGTGAATTaGAGACAATACTTAGAGGAC +
Preference number: 5 (lower is better)
Translates to: LGIPVHSTSDSRKQERDRVLRVN*RQYLED
Trigger: GTCCTCTAAGTATTGTCTCAAATTCACCCTAAGTAC...ACGGTCACGTTCCTGTTTCCTGGAATCACTGGTGCTATGAACTGGGATTCCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284486.9
ENST00000534308.1
CDS-3UTR CAA 90 bp CAAGCAACTAAATCACTCAGTTGCATCCAACTTAATTGGACTGACTACATTCAGCCTTTAACATCTTGGTaGGAGCGGCCCTTCTGCAGA +
Preference number: 5 (lower is better)
Translates to: QATKSLSCIQLNWTDYIQPLTSW*ERPFCR
Trigger: TCTGCAGAAGGGCCGCTCCAACCAAGATGTTAAAGG...CTGAATGTAGTCAGTCCAATTAAGTTGGATGCAACTGAGTGATTTAGTTGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CAA 90 bp GAGCAGGGACTTCACAAAGCTGAATTAATGTGGTTAGTTGTGTTCACTGTGCAACCCCAAACATGTGTCTaGATCTTAGTTTCCACCCAG +
Preference number: 5 (lower is better)
Translates to: EQGLHKAELMWLVVFTVQPQTCV*ILVSTQ
Trigger: CTGGGTGGAAACTAAGATCAAGACACATGTTTGGGG...TTGCACAGTGAACACAACTAACCACATTAATTCAGCTTTGTGAAGTCCCTGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS-3UTR CAA 90 bp AGACATTTAACTTATCCCCAAACATGTGTCTTGATCTTAGTTTCCACCCAGAGAAGCTCCCTGTCAATGTaGCTGAGTCATGTACTTAGG +
Preference number: 5 (lower is better)
Translates to: RHLTYPQTCVLILVSTQRSSLSM*LSHVLR
Trigger: CCTAAGTACATGACTCAGCAACATTGACAGGGAGCT...TCTCTGGGTGGAAACTAAGATCAAGACACATGTTTGGGGATAAGTTAAATGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284486.9
CDS TCA 72 bp GGCTGGGTGGCAGGGGAGCTGAGAGGGACCGCGCAGTaGGCCGCACAGGGCGCCCTCCTGGAGGCTCGGGTC +
Preference number: 6 (lower is better)
Translates to: GWVAGELRGTAQ*AAQGALLEARV
Trigger: GACCCGAGCCTCCAGGAGGGCGCCCTGTGCGGCTCACTGCGCGGTCCCTCTCAGCTCCCCTGCCACCCAGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000531804.5
ENST00000534308.1
ENST00000648766.1
CDS CCA 72 bp GGTGAGGGCCTTCAGGCTCCGGAGGTGGTCATCGGGTaGTGCGGCTGCTCCCGCCCCCTCTTCTGCACCCAC +
Preference number: 6 (lower is better)
Translates to: GEGLQAPEVVIG*CGCSRPLFCTH
Trigger: GTGGGTGCAGAAGAGGGGGCGGGAGCAGCCGCACCACCCGATGACCACCTCCGGAGCCTGAAGGCCCTCACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000531804.5
ENST00000534308.1
ENST00000648766.1
CDS CCA 72 bp CTCAGTTTCTCGGTGAGGGCCTTCAGGCTCCGGAGGTaGTCATCGGGTGGTGCGGCTGCTCCCGCCCCCTCT +
Preference number: 6 (lower is better)
Translates to: LSFSVRAFRLRR*SSGGAAAPAPS
Trigger: AGAGGGGGCGGGAGCAGCCGCACCACCCGATGACCACCTCCGGAGCCTGAAGGCCCTCACCGAGAAACTGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000531804.5
ENST00000534308.1
ENST00000648766.1
CDS TCA 72 bp AGCCGCACAGGGCGCCCTCCTGGAGGCTCGGGTCTATaGTCCGTCCTGGAAGCCTGTGGGTGCCATGCTCCA +
Preference number: 6 (lower is better)
Translates to: SRTGRPPGGSGL*SVLEACGCHAP
Trigger: TGGAGCATGGCACCCACAGGCTTCCAGGACGGATCATAGACCCGAGCCTCCAGGAGGGCGCCCTGTGCGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000284486.9
ENST00000528111.1
ENST00000528897.1
ENST00000531804.5
ENST00000534308.1
ENST00000648766.1
CDS TCA 72 bp AGGAGGGCCTGCGGGTCTCCAGCCTCAGTTTCTCGGTaGGGGCCTTCAGGCTCCGGAGGTGGTCATCGGGTG +
Preference number: 6 (lower is better)
Translates to: RRACGSPASVSR*GPSGSGGGHRV
Trigger: CACCCGATGACCACCTCCGGAGCCTGAAGGCCCTCACCGAGAAACTGAGGCTGGAGACCCGCAGGCCCTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000531804.5
ENST00000534308.1
ENST00000648766.1
CDS GCA 72 bp CAGGGAAACCGCACCCCACACAGGCTAAGGTGGGTCTaGTCCGTCCAGGTGCCACTGCCCCCTCACCACCTC +
Preference number: 6 (lower is better)
Translates to: QGNRTPHRLRWV*SVQVPLPPHHL
Trigger: GAGGTGGTGAGGGGGCAGTGGCACCTGGACGGAGCAGACCCACCTTAGCCTGTGTGGGGTGCGGTTTCCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528897.1
CDS CCA 72 bp GGGAGGCTTGGTGGGTGGCACAGTTGGGTCCCGCTCTaGGATGGCCTCATCCAGGTGCCCGAGGGCATTTCC +
Preference number: 6 (lower is better)
Translates to: GRLGGWHSWVPL*DGLIQVPEGIS
Trigger: GGAAATGCCCTCGGGCACCTGGATGAGGCCATCCCAGAGCGGGACCCAACTGTGCCACCCACCAAGCCTCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000531804.5
ENST00000534308.1
ENST00000648766.1
CDS GCA 72 bp GTCATCGGGTGGTGCGGCTGCTCCCGCCCCCTCTTCTaGACCCACTTCTTCCACGTGGATCTGGGGCACAGA +
Preference number: 6 (lower is better)
Translates to: VIGWCGCSRPLF*THFFHVDLGHR
Trigger: TCTGTGCCCCAGATCCACGTGGAAGAAGTGGGTGCAGAAGAGGGGGCGGGAGCAGCCGCACCACCCGATGAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000531804.5
ENST00000534308.1
ENST00000648766.1
CDS GCA 72 bp TGTGGGAGGGATGAGAACCGCATCAGTCCCGATCCCTaGCCTGCCACTCAGAGGCGGGCACGTCCACTCCAC +
Preference number: 6 (lower is better)
Translates to: CGRDENRISPDP*PATQRRARPLH
Trigger: GTGGAGTGGACGTGCCCGCCTCTGAGTGGCAGGGCAGGGATCGGGACTGATGCGGTTCTCATCCCTCCCACA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534308.1
CDS CAA 72 bp GATGTCGCCACGCAGGCGCATGAGCTGTCTGGCCAGTaGCTGGTCCTGCAGCCGCATCTCCGTCTAGGGTCC +
Preference number: 6 (lower is better)
Translates to: DVATQAHELSGQ*LVLQPHLRLGS
Trigger: GGACCCTAGACGGAGATGCGGCTGCAGGACCAGCAACTGGCCAGACAGCTCATGCGCCTGCGTGGCGACATC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527445.1
CDS GCA 72 bp CGCAGGCGCATGAGCTGTCTGGCCAGTTGCTGGTCCTaGAGCCGCATCTCCGTCAGTTCCTTCCTGAGCCAG +
Preference number: 6 (lower is better)
Translates to: RRRMSCLASCWS*SRISVSSFLSQ
Trigger: CTGGCTCAGGAAGGAACTGACGGAGATGCGGCTGCAGGACCAGCAACTGGCCAGACAGCTCATGCGCCTGCG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS CCA 72 bp TCGCCACGCAGGCGCATGAGCTGTCTGGCCAGTTGCTaGTCCTGCAGCCGCATCTCCGTCAGTTCCTTCCTG +
Preference number: 6 (lower is better)
Translates to: SPRRRMSCLASC*SCSRISVSSFL
Trigger: CAGGAAGGAACTGACGGAGATGCGGCTGCAGGACCAGCAACTGGCCAGACAGCTCATGCGCCTGCGTGGCGA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS CCA 72 bp TCGCCACGCAGGCGCATGAGCTGTCTGGCCAGTTGCTaGTCCTGCAGCCGCATCTCCGTGTGCAGAAGAGTG +
Preference number: 6 (lower is better)
Translates to: SPRRRMSCLASC*SCSRISVCRRV
Trigger: CACTCTTCTGCACACGGAGATGCGGCTGCAGGACCAGCAACTGGCCAGACAGCTCATGCGCCTGCGTGGCGA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531564.1
CDS CCA 72 bp GAAGGCCCAGAGCTCTCTCTTCTCGGGAAGGGCAGGTaGCTGGAGACCCCCTGTGGACGCAGACCTCTTGGT +
Preference number: 6 (lower is better)
Translates to: EGPELSLLGKGR*LETPCGRRPLG
Trigger: ACCAAGAGGTCTGCGTCCACAGGGGGTCTCCAGCCACCTGCCCTTCCCGAGAAGAGAGAGCTCTGGGCCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648766.1
CDS CAA 72 bp GATGTCGCCACGCAGGCGCATGAGCTGTCTGGCCAGTaGCTGGTCCTGCAGCCGCATCTCCGTGTGCAGAAG +
Preference number: 6 (lower is better)
Translates to: DVATQAHELSGQ*LVLQPHLRVQK
Trigger: CTTCTGCACACGGAGATGCGGCTGCAGGACCAGCAACTGGCCAGACAGCTCATGCGCCTGCGTGGCGACATC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531564.1
CDS CAA 90 bp CAGCTTGTTGATGTCGCCACGCAGGCGCATGAGCTGTCTGGCCAGTaGCTGGTCCTGCAGCCGCATCTCCGTGTGCAGAAGAGTGGTCCC +
Preference number: 6 (lower is better)
Translates to: QLVDVATQAHELSGQ*LVLQPHLRVQKSGP
Trigger: GGGACCACTCTTCTGCACACGGAGATGCGGCTGCAGGACCAGCAACTGGCCAGACAGCTCATGCGCCTGCGTGGCGACATCAACAAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531564.1
CDS TCA 72 bp GCTCATCCCGCTCCTCCAGCTCGTAGGTGGCATCGTTaGGCATCCTCCTGTGGAGGCGGCAGGTGTGTTCGA +
Preference number: 6 (lower is better)
Translates to: AHPAPPARRWHR*ASSCGGGRCVR
Trigger: TCGAACACACCTGCCGCCTCCACAGGAGGATGCTCAACGATGCCACCTACGAGCTGGAGGAGCGGGATGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000284486.9
ENST00000527445.1
ENST00000528897.1
ENST00000531564.1
ENST00000534308.1
CDS CAA 72 bp GATGTCGCCACGCAGGCGCATGAGCTGTCTGGCCAGTaGCTGGTCCTGCAGCCGCATCTCCGTCAGTTCCTT +
Preference number: 6 (lower is better)
Translates to: DVATQAHELSGQ*LVLQPHLRQFL
Trigger: AAGGAACTGACGGAGATGCGGCTGCAGGACCAGCAACTGGCCAGACAGCTCATGCGCCTGCGTGGCGACATC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS CAA 90 bp CAGCTTGTTGATGTCGCCACGCAGGCGCATGAGCTGTCTGGCCAGTaGCTGGTCCTGCAGCCGCATCTCCGTCAGTTCCTTCCTGAGCCA +
Preference number: 6 (lower is better)
Translates to: QLVDVATQAHELSGQ*LVLQPHLRQFLPEP
Trigger: TGGCTCAGGAAGGAACTGACGGAGATGCGGCTGCAGGACCAGCAACTGGCCAGACAGCTCATGCGCCTGCGTGGCGACATCAACAAGCTG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000534308.1
CDS GCA 72 bp GGGTCTATGATCCGTCCTGGAAGCCTGTGGGTGCCATaGTCCACAGAAGGCAGGAACAGACAGCGTCGCAGG +
Preference number: 6 (lower is better)
Translates to: GSMIRPGSLWVP*STEGRNRQRRR
Trigger: CCTGCGACGCTGTCTGTTCCTGCCTTCTGTGGAGCATGGCACCCACAGGCTTCCAGGACGGATCATAGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000284486.9
ENST00000528111.1
ENST00000528897.1
ENST00000531804.5
ENST00000534308.1
ENST00000648766.1
CDS CCA 72 bp GCCCCCTCTTCTGCACCCACTTCTTCCACGTGGATCTaGGGCACAGACATTCTACAGTCTGCCCTGGCAGCC +
Preference number: 6 (lower is better)
Translates to: APSSAPTSSTWI*GTDILQSALAA
Trigger: GGCTGCCAGGGCAGACTGTAGAATGTCTGTGCCCCAGATCCACGTGGAAGAAGTGGGTGCAGAAGAGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000284486.9
ENST00000528897.1
ENST00000531804.5
ENST00000534308.1
ENST00000648766.1
CDS CAA 72 bp CTGTGGAGGCGGCAGGTGTGTTCGATTTTCAGCTTGTaGATGTCGCCACGCAGGCGCATGAGCTGTCTGGCC +
Preference number: 6 (lower is better)
Translates to: LWRRQVCSIFSL*MSPRRRMSCLA
Trigger: GGCCAGACAGCTCATGCGCCTGCGTGGCGACATCAACAAGCTGAAAATCGAACACACCTGCCGCCTCCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284486.9
ENST00000527445.1
ENST00000528897.1
ENST00000531564.1
ENST00000534308.1
CDS CAA 90 bp AGCATCCTCCTGTGGAGGCGGCAGGTGTGTTCGATTTTCAGCTTGTaGATGTCGCCACGCAGGCGCATGAGCTGTCTGGCCAGTTGCTGG +
Preference number: 6 (lower is better)
Translates to: SILLWRRQVCSIFSL*MSPRRRMSCLASCW
Trigger: CCAGCAACTGGCCAGACAGCTCATGCGCCTGCGTGGCGACATCAACAAGCTGAAAATCGAACACACCTGCCGCCTCCACAGGAGGATGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284486.9
ENST00000527445.1
ENST00000528897.1
ENST00000531564.1
ENST00000534308.1
CDS CAA 90 bp TTGAGCATCCTCCTGTGGAGGCGGCAGGTGTGTTCGATTTTCAGCTaGTTGATGTCGCCACGCAGGCGCATGAGCTGTCTGGCCAGTTGC +
Preference number: 6 (lower is better)
Translates to: LSILLWRRQVCSIFS*LMSPRRRMSCLASC
Trigger: GCAACTGGCCAGACAGCTCATGCGCCTGCGTGGCGACATCAACAAGCTGAAAATCGAACACACCTGCCGCCTCCACAGGAGGATGCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284486.9
ENST00000527445.1
ENST00000528897.1
ENST00000531564.1
ENST00000534308.1
CDS TCA 72 bp AGATGGGACTTAGACAGCAGTGTTCAGCTCCCCCGATaGTCCGAGTGTGCAGCCGGGGTGGAGAACCACTGT +
Preference number: 6 (lower is better)
Translates to: RWDLDSSVQLPR*SECAAGVENHC
Trigger: ACAGTGGTTCTCCACCCCGGCTGCACACTCGGATCATCGGGGGAGCTGAACACTGCTGTCTAAGTCCCATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528111.1
ENST00000531804.5
CDS GCA 72 bp GAACAGACAGCGTCGCAGGAATCTCGGGGCAGCCTGTaGCAAGGTCTATCTGTCCTGAACGCACTCGAAGAC +
Preference number: 6 (lower is better)
Translates to: EQTASQESRGSL*QGLSVLNALED
Trigger: GTCTTCGAGTGCGTTCAGGACAGATAGACCTTGGCACAGGCTGCCCCGAGATTCCTGCGACGCTGTCTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000284486.9
ENST00000528111.1
ENST00000528897.1
ENST00000531804.5
ENST00000534308.1
ENST00000648766.1
CDS CCA 72 bp GAAGGCCCAGAGCTCTCTCTTCTCGGGAAGGGCAGGTaGCTGGAGACCCGAGATCTCCCAGCAATAAGTTGT +
Preference number: 6 (lower is better)
Translates to: EGPELSLLGKGR*LETRDLPAISC
Trigger: ACAACTTATTGCTGGGAGATCTCGGGTCTCCAGCCACCTGCCCTTCCCGAGAAGAGAGAGCTCTGGGCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528897.1
CDS CAA 72 bp CTCCTGTGGAGGCGGCAGGTGTGTTCGATTTTCAGCTaGTTGATGTCGCCACGCAGGCGCATGAGCTGTCTG +
Preference number: 6 (lower is better)
Translates to: LLWRRQVCSIFS*LMSPRRRMSCL
Trigger: CAGACAGCTCATGCGCCTGCGTGGCGACATCAACAAGCTGAAAATCGAACACACCTGCCGCCTCCACAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284486.9
ENST00000527445.1
ENST00000528897.1
ENST00000531564.1
ENST00000534308.1
CDS CAA 90 bp CCGCCCAGTCTGAGGGCTCCTCAGCAGAGAGAGAACCTCCGAGAGTaGATGTTCATCTTGGTCACGCCAATAAGCTTGAGTGGTGTGGAG +
Preference number: 6 (lower is better)
Translates to: PPSLRAPQQRENLRE*MFILVTPISLSGVE
Trigger: CTCCACACCACTCAAGCTTATTGGCGTGACCAAGATGAACATCAACTCTCGGAGGTTCTCTCTCTGCTGAGGAGCCCTCAGACTGGGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000284486.9
ENST00000527445.1
ENST00000528897.1
ENST00000531564.1
ENST00000534308.1
CDS GCA 72 bp TCTTCATCCCAGACCTCATCAAGCACCTTTCCTAGATaGCCGGGGCTGGAAGCGTCTTTCAAAGGGCTCCAG +
Preference number: 6 (lower is better)
Translates to: SSSQTSSSTFPR*PGLEASFKGLQ
Trigger: CTGGAGCCCTTTGAAAGACGCTTCCAGCCCCGGGCATCTAGGAAAGGTGCTTGATGAGGTCTGGGATGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531804.5
CDS CCA 72 bp AGACCTCATCAAGCACCTTTCCTAGATGCCCGGGGCTaGAAGCGTCTTTCAAAGGGCTCCAGTCTGCCATTC +
Preference number: 6 (lower is better)
Translates to: RPHQAPFLDARG*KRLSKGSSLPF
Trigger: GAATGGCAGACTGGAGCCCTTTGAAAGACGCTTCCAGCCCCGGGCATCTAGGAAAGGTGCTTGATGAGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531804.5
CDS CAA 90 bp TTGGAGCAAGCGAGAATCCCCCTGAGGAACTGGATTCTGATTCAATaGGTCGAGAGATGGGACTTAGACAGCAGTGTTCAGCTCCCCCGA +
Preference number: 6 (lower is better)
Translates to: LEQARIPLRNWILIQ*VERWDLDSSVQLPR
Trigger: TCGGGGGAGCTGAACACTGCTGTCTAAGTCCCATCTCTCGACCAATTGAATCAGAATCCAGTTCCTCAGGGGGATTCTCGCTTGCTCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000528111.1
ENST00000531804.5
CDS CAA 72 bp CAGCAGAGAGAGAACCTCCGAGAGTTGATGTTCATCTaGGTCACGCCAATAAGCTTGAGTGGTGTGGAGAGG +
Preference number: 6 (lower is better)
Translates to: QQRENLRELMFI*VTPISLSGVER
Trigger: CCTCTCCACACCACTCAAGCTTATTGGCGTGACCAAGATGAACATCAACTCTCGGAGGTTCTCTCTCTGCTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000284486.9
ENST00000527445.1
ENST00000528897.1
ENST00000531564.1
ENST00000534308.1
CDS CAA 72 bp CTGAGGGCTCCTCAGCAGAGAGAGAACCTCCGAGAGTaGATGTTCATCTTGGTCACGCCAATAAGCTTGAGT +
Preference number: 6 (lower is better)
Translates to: LRAPQQRENLRE*MFILVTPISLS
Trigger: ACTCAAGCTTATTGGCGTGACCAAGATGAACATCAACTCTCGGAGGTTCTCTCTCTGCTGAGGAGCCCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000284486.9
ENST00000527445.1
ENST00000528897.1
ENST00000531564.1
ENST00000534308.1
CDS CCA 72 bp CTCTGCTTGGAGCAAGCGAGAATCCCCCTGAGGAACTaGATTCTGATTCAATTGGTCGAGAGATGGGACTTA +
Preference number: 6 (lower is better)
Translates to: LCLEQARIPLRN*ILIQLVERWDL
Trigger: TAAGTCCCATCTCTCGACCAATTGAATCAGAATCCAGTTCCTCAGGGGGATTCTCGCTTGCTCCAAGCAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528111.1
ENST00000531804.5
CDS CAA 72 bp GCGAGAATCCCCCTGAGGAACTGGATTCTGATTCAATaGGTCGAGAGATGGGACTTAGACAGCAGTGTTCAG +
Preference number: 6 (lower is better)
Translates to: ARIPLRNWILIQ*VERWDLDSSVQ
Trigger: CTGAACACTGCTGTCTAAGTCCCATCTCTCGACCAATTGAATCAGAATCCAGTTCCTCAGGGGGATTCTCGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528111.1
ENST00000531804.5