RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM161B (Homo sapiens)

Ensembl gene IDs: ENSG00000156050

Ensembl transcript IDs: ENST00000286544.5, ENST00000556794.5, ENST00000651776.1

Found 400 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGCTTCTTTTCTAACTACCATCTGATCAGACAAGGAATGAAGCAATaGCTGTGGGCTGGGAAACTGTACCTACCTCTCTTCCCACTGCAA +
Preference number: 1 (lower is better)
Translates to: SFFSNYHLIRQGMKQ*LWAGKLYLPLFPLQ
Trigger: TTGCAGTGGGAAGAGAGGTAGGTACAGTTTCCCAGCCCACAGTCATTGCTTCATTCCTTGTCTGATCAGATGGTAGTTAGAAAAGAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556794.5
3UTR CCA 90 bp GTGGGCTGGGAAACTGTACCTACCTCTCTTCCCACTGCAAATTTCTaGGATAGACCAAAAGTGAATTTGATTATGTGTTGGCTGAAGTTC +
Preference number: 1 (lower is better)
Translates to: VGWETVPTSLPTANF*DRPKVNLIMCWLKF
Trigger: GAACTTCAGCCAACACATAATCAAATTCACTTTTGGTCTATCCCAGAAATTTGCAGTGGGAAGAGAGGTAGGTACAGTTTCCCAGCCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556794.5
3UTR TCA 90 bp AATGTAGTTGATGTAGTAACTCTGAGCCTATATTCCAGCAGGATTTaGTACTTTCCAGTGTCTACTATCTCCTACTGTCTACACCCACTC +
Preference number: 1 (lower is better)
Translates to: NVVDVVTLSLYSSRI*YFPVSTISYCLHPL
Trigger: GAGTGGGTGTAGACAGTAGGAGATAGTAGACACTGGAAAGTATCAAATCCTGCTGGAATATAGGCTCAGAGTTACTACATCAACTACATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
3UTR-3UTR TCA 90 bp CAGACAAGGAATGAAGCAATGACTGTGGGCTGGGAAACTGTACCTACCTCTCTTCCCCTTGGCCCAGGCTaGGGTACTATCTTGTCCTAT +
Preference number: 2 (lower is better)
Translates to: QTRNEAMTVGWETVPTSLPLGPG*GTILSY
Trigger: ATAGGACAAGATAGTACCTCAGCCTGGGCCAAGGGG...AAGAGAGGTAGGTACAGTTTCCCAGCCCACAGTCATTGCTTCATTCCTTGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556794.5
3UTR-3UTR CCA 90 bp TGTACAGGACAGTTCCCTTCCCCAACCCTCAACAAAGAATTAGGTGGCCCAAAAGTGAGCCACTGCGCCTaGCCTGTTAATCTGCTACTC +
Preference number: 2 (lower is better)
Translates to: CTGQFPSPTLNKELGGPKVSHCA*PVNLLL
Trigger: GAGTAGCAGATTAACAGGCCAGGCGCAGTGGCTCAC...TTTTGGGCCACCTAATTCTTTGTTGAGGGTTGGGGAAGGGAACTGTCCTGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
3UTR-3UTR TCA 90 bp TGTACAGGACAGTTCCCTTCCCCAACCCTCAACAAAGAATTAGGTGGCCCAAAACTGGTCTCAAACTCCTaGCCTCAGATGATCTGCCTG +
Preference number: 2 (lower is better)
Translates to: CTGQFPSPTLNKELGGPKLVSNS*PQMICL
Trigger: CAGGCAGATCATCTGAGGTCAGGAGTTTGAGACCAG...TTTTGGGCCACCTAATTCTTTGTTGAGGGTTGGGGAAGGGAACTGTCCTGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
3UTR-3UTR TCA 90 bp CAGGTAGTGGCCAGGGATGCTACTAAACATTCTACAATGTACAGGACAGTTCCCCTGGTCTCAAACTCCTaGCCTCAGATGATCTGCCTG +
Preference number: 2 (lower is better)
Translates to: QVVARDATKHSTMYRTVPLVSNS*PQMICL
Trigger: CAGGCAGATCATCTGAGGTCAGGAGTTTGAGACCAG...GGGAACTGTCCTGTACATTGTAGAATGTTTAGTAGCATCCCTGGCCACTACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
3UTR CAA 90 bp CTGGGAACAGGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTaGAAGGCACAAGACTCTGCTTTTGCCACTCTTCCTCTTTCCTGG +
Preference number: 2 (lower is better)
Translates to: LGTGCLSPQQNQNES*KAQDSAFATLPLSW
Trigger: CCAGGAAAGAGGAAGAGTGGCAAAAGCAGAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556794.5
3UTR-3UTR CCA 90 bp CAGGTAGTGGCCAGGGATGCTACTAAACATTCTACAATGTACAGGACAGTTCCCTTTTGCCGTGTTGGCTaGACTGGTCTCAAACTCCTG +
Preference number: 2 (lower is better)
Translates to: QVVARDATKHSTMYRTVPFCRVG*TGLKLL
Trigger: CAGGAGTTTGAGACCAGTCCAGCCAACACGGCAAAA...GGGAACTGTCCTGTACATTGTAGAATGTTTAGTAGCATCCCTGGCCACTACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
3UTR-3UTR CCA 90 bp TGTACAGGACAGTTCCCTTCCCCAACCCTCAACAAAGAATTAGGTGGCCCAAAATTTTGCCGTGTTGGCTaGACTGGTCTCAAACTCCTG +
Preference number: 2 (lower is better)
Translates to: CTGQFPSPTLNKELGGPKFCRVG*TGLKLL
Trigger: CAGGAGTTTGAGACCAGTCCAGCCAACACGGCAAAA...TTTTGGGCCACCTAATTCTTTGTTGAGGGTTGGGGAAGGGAACTGTCCTGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
3UTR-3UTR CCA 90 bp CAGGTAGTGGCCAGGGATGCTACTAAACATTCTACAATGTACAGGACAGTTCCCCAGGCTGGAGTGCTGTaGAGTGATCTCAGCTCATTA +
Preference number: 2 (lower is better)
Translates to: QVVARDATKHSTMYRTVPQAGVL*SDLSSL
Trigger: TAATGAGCTGAGATCACTCCACAGCACTCCAGCCTG...GGGAACTGTCCTGTACATTGTAGAATGTTTAGTAGCATCCCTGGCCACTACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
3UTR-3UTR CCA 90 bp CACCCACTCCATGGACGCATTTATGTTTCTGCACTAGCCCCTTATAGGCATTTGCAGGCTGGAGTGCTGTaGAGTGATCTCAGCTCATTA +
Preference number: 2 (lower is better)
Translates to: HPLHGRIYVSALAPYRHLQAGVL*SDLSSL
Trigger: TAATGAGCTGAGATCACTCCACAGCACTCCAGCCTG...CAAATGCCTATAAGGGGCTAGTGCAGAAACATAAATGCGTCCATGGAGTGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
3UTR-3UTR GCA 90 bp TGCGCCTGGCCTGTTAATCTGCTACTCTTCATTTGTCCATCCTCTAACAGTAGCAACCCAAGTTTTCCCTaGCTTGACTCAAACCCAAGT +
Preference number: 2 (lower is better)
Translates to: CAWPVNLLLFICPSSNSSNPSFP*LDSNPS
Trigger: ACTTGGGTTTGAGTCAAGGCAGGGAAAACTTGGGTT...GCTACTGTTAGAGGATGGACAAATGAAGAGTAGCAGATTAACAGGCCAGGCGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
3UTR-3UTR GCA 90 bp CACCCACTCCATGGACGCATTTATGTTTCTGCACTAGCCCCTTATAGGCATTTGAACCCAAGTTTTCCCTaGCTTGACTCAAACCCAAGT +
Preference number: 2 (lower is better)
Translates to: HPLHGRIYVSALAPYRHLNPSFP*LDSNPS
Trigger: ACTTGGGTTTGAGTCAAGGCAGGGAAAACTTGGGTT...CAAATGCCTATAAGGGGCTAGTGCAGAAACATAAATGCGTCCATGGAGTGGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
3UTR-3UTR GCA 90 bp TGTACAGGACAGTTCCCTTCCCCAACCCTCAACAAAGAATTAGGTGGCCCAAAAGCTCATTACAACCTCTaGCTCTTGGGTTCAAGTGAT +
Preference number: 2 (lower is better)
Translates to: CTGQFPSPTLNKELGGPKAHYNL*LLGSSD
Trigger: ATCACTTGAACCCAAGAGGCAGAGGTTGTAATGAGC...TTTTGGGCCACCTAATTCTTTGTTGAGGGTTGGGGAAGGGAACTGTCCTGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
3UTR-3UTR GCA 90 bp CAGGTAGTGGCCAGGGATGCTACTAAACATTCTACAATGTACAGGACAGTTCCCGCTCATTACAACCTCTaGCTCTTGGGTTCAAGTGAT +
Preference number: 2 (lower is better)
Translates to: QVVARDATKHSTMYRTVPAHYNL*LLGSSD
Trigger: ATCACTTGAACCCAAGAGGCAGAGGTTGTAATGAGC...GGGAACTGTCCTGTACATTGTAGAATGTTTAGTAGCATCCCTGGCCACTACCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
3UTR-3UTR CCA 90 bp ACTAGAAGTTGTAAGTTTTTCATCCCCCATGGGCTAGATCTGATATGCAGATGTCCGTGTTGGCTGGACTaGTCTCAAACTCCTGACCTC +
Preference number: 2 (lower is better)
Translates to: TRSCKFFIPHGLDLICRCPCWLD*SQTPDL
Trigger: GAGGTCAGGAGTTTGAGACCAGTCCAGCCAACACGG...ACATCTGCATATCAGATCTAGCCCATGGGGGATGAAAAACTTACAACTTCTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
3UTR-3UTR CCA 90 bp TGTACAGGACAGTTCCCTTCCCCAACCCTCAACAAAGAATTAGGTGGCCCAAAAGTTTTTCATCCCCCATaGGCTAGATCTGATATGCAG +
Preference number: 2 (lower is better)
Translates to: CTGQFPSPTLNKELGGPKVFHPP*ARSDMQ
Trigger: CTGCATATCAGATCTAGCCCATGGGGGATGAAAAAC...TTTTGGGCCACCTAATTCTTTGTTGAGGGTTGGGGAAGGGAACTGTCCTGTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
3UTR-3UTR TCA 90 bp CTGGAAGAGCAACTCTATCTGATCTCAAAATGCGTATACTGGGAACAGGATGCCGCTTCACCAGGAAGTTaGGTTTTCAAGATGCCTTGT +
Preference number: 2 (lower is better)
Translates to: LEEQLYLISKCVYWEQDAASPGS*VFKMPC
Trigger: ACAAGGCATCTTGAAAACTCAACTTCCTGGTGAAGC...GGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGATAGAGTTGCTCTTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556794.5
3UTR-3UTR GCA 90 bp ACTAGAAGTTGTAAGTTTTTCATCCCCCATGGGCTAGATCTGATATGCAGATGTGTAGAGGTGGAGTTTTaGCGTGTTGGCTGGACTGGT +
Preference number: 2 (lower is better)
Translates to: TRSCKFFIPHGLDLICRCVEVEF*RVGWTG
Trigger: ACCAGTCCAGCCAACACGGCAAAACTCCACCTCTAC...ACATCTGCATATCAGATCTAGCCCATGGGGGATGAAAAACTTACAACTTCTAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
3UTR CAA 90 bp CCCTTGGCCCAGGCTGAGGTACTATCTTGTCCTATACACTTCTACTaGGTCACTTTGCTTTCTTCGTTAATGGAACATACAGTAGCATGT +
Preference number: 2 (lower is better)
Translates to: PLAQAEVLSCPIHFY*VTLLSSLMEHTVAC
Trigger: ACATGCTACTGTATGTTCCATTAACGAAGAAAGCAAAGTGACCAAGTAGAAGTGTATAGGACAAGATAGTACCTCAGCCTGGGCCAAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556794.5
3UTR-3UTR TCA 90 bp CAGGTAGTGGCCAGGGATGCTACTAAACATTCTACAATGTACAGGACAGTTCCCTATTCCAGCAGGATTTaGTACTTTCCAGTGTCTACT +
Preference number: 2 (lower is better)
Translates to: QVVARDATKHSTMYRTVPYSSRI*YFPVST
Trigger: AGTAGACACTGGAAAGTATCAAATCCTGCTGGAATA...GGGAACTGTCCTGTACATTGTAGAATGTTTAGTAGCATCCCTGGCCACTACCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
3UTR-3UTR TCA 90 bp CTACTAAACATTCTACAATGTACAGGACAGTTCCCTTCCCCAACCCTCAACAAAAAGTTTTCCCTGCCTTaGCTCAAACCCAAGTTAGCT +
Preference number: 2 (lower is better)
Translates to: LLNILQCTGQFPSPTLNKKFSLP*LKPKLA
Trigger: AGCTAACTTGGGTTTGAGTCAAGGCAGGGAAAACTT...TTTGTTGAGGGTTGGGGAAGGGAACTGTCCTGTACATTGTAGAATGTTTAGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
3UTR-3UTR CCA 90 bp CAACAAAGAATTAGGTGGCCCAAAATATTAATAGCACTGAGGATAAGAAATCCTCCGTGTTGGCTGGACTaGTCTCAAACTCCTGACCTC +
Preference number: 2 (lower is better)
Translates to: QQRIRWPKILIALRIRNPPCWLD*SQTPDL
Trigger: GAGGTCAGGAGTTTGAGACCAGTCCAGCCAACACGG...AGGATTTCTTATCCTCAGTGCTATTAATATTTTGGGCCACCTAATTCTTTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
3UTR-3UTR CCA 90 bp CAGACAAGGAATGAAGCAATGACTGTGGGCTGGGAAACTGTACCTACCTCTCTTCTATACACTTCTACTTaGTCACTTTGCTTTCTTCGT +
Preference number: 2 (lower is better)
Translates to: QTRNEAMTVGWETVPTSLLYTST*SLCFLR
Trigger: ACGAAGAAAGCAAAGTGACCAAGTAGAAGTGTATAG...AAGAGAGGTAGGTACAGTTTCCCAGCCCACAGTCATTGCTTCATTCCTTGTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556794.5
3UTR CAA 90 bp ACCTCTCTTCCCACTGCAAATTTCTGGGATAGACCAAAAGTGAATTaGATTATGTGTTGGCTGAAGTTCTTCATTCTGACTGTTGAGGGG +
Preference number: 2 (lower is better)
Translates to: TSLPTANFWDRPKVN*IMCWLKFFILTVEG
Trigger: CCCCTCAACAGTCAGAATGAAGAACTTCAGCCAACACATAATCAAATTCACTTTTGGTCTATCCCAGAAATTTGCAGTGGGAAGAGAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556794.5
3UTR-3UTR GCA 90 bp CAGGTAGTGGCCAGGGATGCTACTAAACATTCTACAATGTACAGGACAGTTCCCGGGCTAGATCTGATATaGAGATGTATTTTATTTTGC +
Preference number: 2 (lower is better)
Translates to: QVVARDATKHSTMYRTVPGLDLI*RCILFC
Trigger: GCAAAATAAAATACATCTGCATATCAGATCTAGCCC...GGGAACTGTCCTGTACATTGTAGAATGTTTAGTAGCATCCCTGGCCACTACCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
3UTR-3UTR GCA 90 bp TGTACAGGACAGTTCCCTTCCCCAACCCTCAACAAAGAATTAGGTGGCCCAAAAGGGCTAGATCTGATATaGAGATGTATTTTATTTTGC +
Preference number: 2 (lower is better)
Translates to: CTGQFPSPTLNKELGGPKGLDLI*RCILFC
Trigger: GCAAAATAAAATACATCTGCATATCAGATCTAGCCC...TTTTGGGCCACCTAATTCTTTGTTGAGGGTTGGGGAAGGGAACTGTCCTGTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
3UTR CAA 90 bp ACAGAGCTTCACCAGGAAGTTGAGTTTTCAAGATGCCTTGTTGCTTaGAAGAAGGGAGTGATGTCAATTCTCTTGTTACATTCTCCCTTT +
Preference number: 2 (lower is better)
Translates to: TELHQEVEFSRCLVA*KKGVMSILLLHSPF
Trigger: AAAGGGAGAATGTAACAAGAGAATTGACATCACTCCCTTCTTCAAAGCAACAAGGCATCTTGAAAACTCAACTTCCTGGTGAAGCTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556794.5
3UTR-3UTR GCA 90 bp ACTAGAAGTTGTAAGTTTTTCATCCCCCATGGGCTAGATCTGATATGCAGATGTCCTGGCCTGTTAATCTaGTACTCTTCATTTGTCCAT +
Preference number: 2 (lower is better)
Translates to: TRSCKFFIPHGLDLICRCPGLLI*YSSFVH
Trigger: ATGGACAAATGAAGAGTAGCAGATTAACAGGCCAGG...ACATCTGCATATCAGATCTAGCCCATGGGGGATGAAAAACTTACAACTTCTAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
3UTR CAA 90 bp AGACTGTGTTCATGGCAATTACTTGTATTCTTAGAATGCCAGTTTTaGCTTCATGCAGCCATTTATATTAGAGCAGTGGTTCTCAGCCAG +
Preference number: 2 (lower is better)
Translates to: RLCSWQLLVFLECQF*LHAAIYIRAVVLSQ
Trigger: CTGGCTGAGAACCACTGCTCTAATATAAATGGCTGCATGAAGCAAAAACTGGCATTCTAAGAATACAAGTAATTGCCATGAACACAGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
3UTR-3UTR TCA 90 bp CAACAAAGAATTAGGTGGCCCAAAATATTAATAGCACTGAGGATAAGAAATCCTAAGTTTTCCCTGCCTTaGCTCAAACCCAAGTTAGCT +
Preference number: 2 (lower is better)
Translates to: QQRIRWPKILIALRIRNPKFSLP*LKPKLA
Trigger: AGCTAACTTGGGTTTGAGTCAAGGCAGGGAAAACTT...AGGATTTCTTATCCTCAGTGCTATTAATATTTTGGGCCACCTAATTCTTTGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
3UTR-3UTR GCA 90 bp CAACAAAGAATTAGGTGGCCCAAAATATTAATAGCACTGAGGATAAGAAATCCTCCTGGCCTGTTAATCTaGTACTCTTCATTTGTCCAT +
Preference number: 2 (lower is better)
Translates to: QQRIRWPKILIALRIRNPPGLLI*YSSFVH
Trigger: ATGGACAAATGAAGAGTAGCAGATTAACAGGCCAGG...AGGATTTCTTATCCTCAGTGCTATTAATATTTTGGGCCACCTAATTCTTTGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
3UTR-3UTR CCA 90 bp AAAGTGAATTTGATTATGTGTTGGCTGAAGTTCTTCATTCTGACTGTTGAGGGGGCCCAGTCAGTTCTTTaGCTCTTGTTTTATACAAAA +
Preference number: 2 (lower is better)
Translates to: KVNLIMCWLKFFILTVEGAQSVL*LLFYTK
Trigger: TTTTGTATAAAACAAGAGCCAAAGAACTGACTGGGC...CCCCTCAACAGTCAGAATGAAGAACTTCAGCCAACACATAATCAAATTCACTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556794.5
3UTR CCA 72 bp TATGCAATATCTGGAGACATTTTTGGTTGTCACAGCTaGGGAGAGGGGTACTACTGGCATCTAGCAGGTAGT +
Preference number: 3 (lower is better)
Translates to: YAISGDIFGCHS*GEGYYWHLAGS
Trigger: ACTACCTGCTAGATGCCAGTAGTACCCCTCTCCCCAGCTGTGACAACCAAAAATGTCTCCAGATATTGCATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
3UTR TCA 72 bp TCTAACTACCATCTGATCAGACAAGGAATGAAGCAATaGCTGTGGGCTGGGAAACTGTACCTACCTCTCTTC +
Preference number: 3 (lower is better)
Translates to: SNYHLIRQGMKQ*LWAGKLYLPLF
Trigger: GAAGAGAGGTAGGTACAGTTTCCCAGCCCACAGTCATTGCTTCATTCCTTGTCTGATCAGATGGTAGTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556794.5
3UTR TCA 72 bp TTACTAAACCAAGGAGATTTAACTGAAAGACGGACATaGGCGTGGGTGCTGACTCCTGGAAGAGCAACTCTA +
Preference number: 3 (lower is better)
Translates to: LLNQGDLTERRT*AWVLTPGRATL
Trigger: TAGAGTTGCTCTTCCAGGAGTCAGCACCCACGCTCATGTCCGTCTTTCAGTTAAATCTCCTTGGTTTAGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556794.5
3UTR CCA 72 bp GAAGAGCAACTCTATCTGATCTCAAAATGCGTATACTaGGAACAGGATGCCTTAGCCCACAACAGAACCAGA +
Preference number: 3 (lower is better)
Translates to: EEQLYLISKCVY*EQDALAHNRTR
Trigger: TCTGGTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGATAGAGTTGCTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556794.5
3UTR-3UTR CAA 90 bp ACTAGAAGTTGTAAGTTTTTCATCCCCCATGGGCTAGATCTGATATGCAGATGTCTGAGCCTCCCCACTTaGATTTCCTTGAACTATTCT +
Preference number: 3 (lower is better)
Translates to: TRSCKFFIPHGLDLICRCLSLPT*ISLNYS
Trigger: AGAATAGTTCAAGGAAATCAAAGTGGGGAGGCTCAG...ACATCTGCATATCAGATCTAGCCCATGGGGGATGAAAAACTTACAACTTCTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
3UTR-3UTR CAA 90 bp CTGGAAGAGCAACTCTATCTGATCTCAAAATGCGTATACTGGGAACAGGATGCCAGACCAAAAGTGAATTaGATTATGTGTTGGCTGAAG +
Preference number: 3 (lower is better)
Translates to: LEEQLYLISKCVYWEQDARPKVN*IMCWLK
Trigger: CTTCAGCCAACACATAATCAAATTCACTTTTGGTCT...GGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGATAGAGTTGCTCTTCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556794.5
3UTR-3UTR CAA 90 bp ACAGAGCTTCACCAGGAAGTTGAGTTTTCAAGATGCCTTGTTGCTTTGAAGAAGGTGATGTCAATTCTCTaGTTACATTCTCCCTTTAGC +
Preference number: 3 (lower is better)
Translates to: TELHQEVEFSRCLVALKKVMSIL*LHSPFS
Trigger: GCTAAAGGGAGAATGTAACAAGAGAATTGACATCAC...CTTCTTCAAAGCAACAAGGCATCTTGAAAACTCAACTTCCTGGTGAAGCTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556794.5
3UTR-3UTR CAA 90 bp AAGAAGGGAGTGATGTCAATTCTCTTGTTACATTCTCCCTTTAGCAACCTGAGTAGCCCAGTCAGTTCTTaGGCTCTTGTTTTATACAAA +
Preference number: 3 (lower is better)
Translates to: KKGVMSILLLHSPFSNLSSPVSS*ALVLYK
Trigger: TTTGTATAAAACAAGAGCCAAAGAACTGACTGGGCT...ACTCAGGTTGCTAAAGGGAGAATGTAACAAGAGAATTGACATCACTCCCTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556794.5
3UTR-3UTR CAA 90 bp AAAGTGAATTTGATTATGTGTTGGCTGAAGTTCTTCATTCTGACTGTTGAGGGGCCTATACACTTCTACTaGGTCACTTTGCTTTCTTCG +
Preference number: 3 (lower is better)
Translates to: KVNLIMCWLKFFILTVEGPIHFY*VTLLSS
Trigger: CGAAGAAAGCAAAGTGACCAAGTAGAAGTGTATAGG...CCCCTCAACAGTCAGAATGAAGAACTTCAGCCAACACATAATCAAATTCACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556794.5
3UTR TCA 72 bp AAAAATAAATTACTTGAATCTCCCCTTGGCCCAGGCTaGGGTACTATCTTGTCCTATACACTTCTACTTGGT +
Preference number: 3 (lower is better)
Translates to: KNKLLESPLGPG*GTILSYTLLLG
Trigger: ACCAAGTAGAAGTGTATAGGACAAGATAGTACCTCAGCCTGGGCCAAGGGGAGATTCAAGTAATTTATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556794.5
3UTR CCA 72 bp GAAACTGTACCTACCTCTCTTCCCACTGCAAATTTCTaGGATAGACCAAAAGTGAATTTGATTATGTGTTGG +
Preference number: 3 (lower is better)
Translates to: ETVPTSLPTANF*DRPKVNLIMCW
Trigger: CCAACACATAATCAAATTCACTTTTGGTCTATCCCAGAAATTTGCAGTGGGAAGAGAGGTAGGTACAGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556794.5
3UTR TCA 72 bp CCACTGCACCGAGCCAGAATATCCAATTATTATTGGTaGGAAGAAAATTATTCCAAAGTTCACCTACTAGTA +
Preference number: 3 (lower is better)
Translates to: PLHRARISNYYW*EENYSKVHLLV
Trigger: TACTAGTAGGTGAACTTTGGAATAATTTTCTTCTCACCAATAATAATTGGATATTCTGGCTCGGTGCAGTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286544.5
CDS-3UTR TCA 90 bp CAGGTAGTGGCCAGGGATGCTACTAAACATTCTACAATGTACAGGACAGTTCCCGCATCACAGGGCCGCTaGGGGTGGCGCAGGTTGGCG +
Preference number: 4 (lower is better)
Translates to: QVVARDATKHSTMYRTVPASQGR*GWRRLA
Trigger: CGCCAACCTGCGCCACCCTCAGCGGCCCTGTGATGC...GGGAACTGTCCTGTACATTGTAGAATGTTTAGTAGCATCCCTGGCCACTACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR TCA 90 bp CACCCACTCCATGGACGCATTTATGTTTCTGCACTAGCCCCTTATAGGCATTTGGCATCACAGGGCCGCTaGGGGTGGCGCAGGTTGGCG +
Preference number: 4 (lower is better)
Translates to: HPLHGRIYVSALAPYRHLASQGR*GWRRLA
Trigger: CGCCAACCTGCGCCACCCTCAGCGGCCCTGTGATGC...CAAATGCCTATAAGGGGCTAGTGCAGAAACATAAATGCGTCCATGGAGTGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR GCA 90 bp CACCCACTCCATGGACGCATTTATGTTTCTGCACTAGCCCCTTATAGGCATTTGGCGACGGCGCAGGTCTaGACCATGGCGGCCCGGCTT +
Preference number: 4 (lower is better)
Translates to: HPLHGRIYVSALAPYRHLATAQV*TMAARL
Trigger: AAGCCGGGCCGCCATGGTGCAGACCTGCGCCGTCGC...CAAATGCCTATAAGGGGCTAGTGCAGAAACATAAATGCGTCCATGGAGTGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651776.1
CDS-3UTR CCA 90 bp TGCGCCTGGCCTGTTAATCTGCTACTCTTCATTTGTCCATCCTCTAACAGTAGCCCCACAGCGGCCCGCTaGTGTCCTGGCGCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: CAWPVNLLLFICPSSNSSPTAAR*CPGAGG
Trigger: ACCACCTGCGCCAGGACACCAGCGGGCCGCTGTGGG...GCTACTGTTAGAGGATGGACAAATGAAGAGTAGCAGATTAACAGGCCAGGCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651776.1
CDS-3UTR TCA 90 bp CAGGTAGTGGCCAGGGATGCTACTAAACATTCTACAATGTACAGGACAGTTCCCGGCCTGCGGGAGTTCTaGGTGCGACGGCGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: QVVARDATKHSTMYRTVPGLREF*VRRRRS
Trigger: AGACCTGCGCCGTCGCACTCAGAACTCCCGCAGGCC...GGGAACTGTCCTGTACATTGTAGAATGTTTAGTAGCATCCCTGGCCACTACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651776.1
CDS-3UTR CCA 90 bp CACCCACTCCATGGACGCATTTATGTTTCTGCACTAGCCCCTTATAGGCATTTGTCCTCACCCTGCCTCTaGGCCCGCTGCCTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: HPLHGRIYVSALAPYRHLSSPCL*ARCLSC
Trigger: GCAGGAGAGGCAGCGGGCCCAGAGGCAGGGTGAGGA...CAAATGCCTATAAGGGGCTAGTGCAGAAACATAAATGCGTCCATGGAGTGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CCA 90 bp CACCCACTCCATGGACGCATTTATGTTTCTGCACTAGCCCCTTATAGGCATTTGCCTGCTGGGTTCGGGTaGCTGTGCGGGGCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: HPLHGRIYVSALAPYRHLPAGFG*LCGAVG
Trigger: ACCCACAGCCCCGCACAGCCACCCGAACCCAGCAGG...CAAATGCCTATAAGGGGCTAGTGCAGAAACATAAATGCGTCCATGGAGTGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR GCA 90 bp TGTACAGGACAGTTCCCTTCCCCAACCCTCAACAAAGAATTAGGTGGCCCAAAATTCTGGATCCCTGCCTaGCTTCGGGCCTCGCTGCGC +
Preference number: 4 (lower is better)
Translates to: CTGQFPSPTLNKELGGPKFWIPA*LRASLR
Trigger: GCGCAGCGAGGCCCGAAGGCAGGCAGGGATCCAGAA...TTTTGGGCCACCTAATTCTTTGTTGAGGGTTGGGGAAGGGAACTGTCCTGTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CCA 90 bp TGCGCCTGGCCTGTTAATCTGCTACTCTTCATTTGTCCATCCTCTAACAGTAGCAGAGCCTGCGGGCACTaGACCTGCACCATCCCCCTG +
Preference number: 4 (lower is better)
Translates to: CAWPVNLLLFICPSSNSSRACGH*TCTIPL
Trigger: CAGGGGGATGGTGCAGGTCCAGTGCCCGCAGGCTCT...GCTACTGTTAGAGGATGGACAAATGAAGAGTAGCAGATTAACAGGCCAGGCGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CCA 90 bp TGCGCCTGGCCTGTTAATCTGCTACTCTTCATTTGTCCATCCTCTAACAGTAGCCTGACGCTTCTGTGCTaGGAGGGAGGCCGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: CAWPVNLLLFICPSSNSSLTLLC*EGGREP
Trigger: AGGCTCCCGGCCTCCCTCCCAGCACAGAAGCGTCAG...GCTACTGTTAGAGGATGGACAAATGAAGAGTAGCAGATTAACAGGCCAGGCGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CCA 90 bp TTAGAGCAGGCACTCTTGCTATCAGTCATCCTGTCTCCACAGCTACTGAGAAAATCCTCACCCTGCCTCTaGGCCCGCTGCCTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LEQALLLSVILSPQLLRKSSPCL*ARCLSC
Trigger: GCAGGAGAGGCAGCGGGCCCAGAGGCAGGGTGAGGA...TTTTCTCAGTAGCTGTGGAGACAGGATGACTGATAGCAAGAGTGCCTGCTCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286544.5
CDS-3UTR CCA 90 bp TGTACAGGACAGTTCCCTTCCCCAACCCTCAACAAAGAATTAGGTGGCCCAAAAGCCTCCTTCCGGTGGTaGCAGCATCACAGGGCCGCT +
Preference number: 4 (lower is better)
Translates to: CTGQFPSPTLNKELGGPKASFRW*QHHRAA
Trigger: AGCGGCCCTGTGATGCTGCCACCACCGGAAGGAGGC...TTTTGGGCCACCTAATTCTTTGTTGAGGGTTGGGGAAGGGAACTGTCCTGTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR TCA 90 bp CAGGTAGTGGCCAGGGATGCTACTAAACATTCTACAATGTACAGGACAGTTCCCCTCAAAGGAGGCAGGTaGGCCCAGCCACTCGGCCTT +
Preference number: 4 (lower is better)
Translates to: QVVARDATKHSTMYRTVPLKGGR*AQPLGL
Trigger: AAGGCCGAGTGGCTGGGCTCACCTGCCTCCTTTGAG...GGGAACTGTCCTGTACATTGTAGAATGTTTAGTAGCATCCCTGGCCACTACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR GCA 90 bp TTAGAGCAGGCACTCTTGCTATCAGTCATCCTGTCTCCACAGCTACTGAGAAAATTCTGGATCCCTGCCTaGCTTCGGGCCTCGCTGCGC +
Preference number: 4 (lower is better)
Translates to: LEQALLLSVILSPQLLRKFWIPA*LRASLR
Trigger: GCGCAGCGAGGCCCGAAGGCAGGCAGGGATCCAGAA...TTTTCTCAGTAGCTGTGGAGACAGGATGACTGATAGCAAGAGTGCCTGCTCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286544.5
CDS-3UTR GCA 90 bp TGCGCCTGGCCTGTTAATCTGCTACTCTTCATTTGTCCATCCTCTAACAGTAGCGGCTGTGGGGAATCCTaGCTCCTTCCGGTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: CAWPVNLLLFICPSSNSSGCGES*LLPVVA
Trigger: TGCCACCACCGGAAGGAGGCAGGATTCCCCACAGCC...GCTACTGTTAGAGGATGGACAAATGAAGAGTAGCAGATTAACAGGCCAGGCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR GCA 90 bp CTACTAAACATTCTACAATGTACAGGACAGTTCCCTTCCCCAACCCTCAACAAAATGCGGGGCTGTGCGTaGAGCTCCCCACAGCGGCCC +
Preference number: 4 (lower is better)
Translates to: LLNILQCTGQFPSPTLNKMRGCA*SSPQRP
Trigger: GGGCCGCTGTGGGGAGCTGCACGCACAGCCCCGCAT...TTTGTTGAGGGTTGGGGAAGGGAACTGTCCTGTACATTGTAGAATGTTTAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000651776.1
CDS-3UTR CCA 90 bp CACCCACTCCATGGACGCATTTATGTTTCTGCACTAGCCCCTTATAGGCATTTGGAAGCGGGACGGGATTaGAGTGCTCTGCTCCGGACG +
Preference number: 4 (lower is better)
Translates to: HPLHGRIYVSALAPYRHLEAGRD*SALLRT
Trigger: CGTCCGGAGCAGAGCACTCCAATCCCGTCCCGCTTC...CAAATGCCTATAAGGGGCTAGTGCAGAAACATAAATGCGTCCATGGAGTGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651776.1
CDS-3UTR TCA 90 bp TGTACAGGACAGTTCCCTTCCCCAACCCTCAACAAAGAATTAGGTGGCCCAAAAATGATGCCCAGGAGCTaGCGCTTCTGTGCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: CTGQFPSPTLNKELGGPKMMPRS*RFCAGR
Trigger: CCTCCCAGCACAGAAGCGTCAGCTCCTGGGCATCAT...TTTTGGGCCACCTAATTCTTTGTTGAGGGTTGGGGAAGGGAACTGTCCTGTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR TCA 90 bp TGTACAGGACAGTTCCCTTCCCCAACCCTCAACAAAGAATTAGGTGGCCCAAAACCTCGCTGCGCTCCATaGTCTCTTGGTAGAGGGGCA +
Preference number: 4 (lower is better)
Translates to: CTGQFPSPTLNKELGGPKPRCAP*SLGRGA
Trigger: TGCCCCTCTACCAAGAGATCATGGAGCGCAGCGAGG...TTTTGGGCCACCTAATTCTTTGTTGAGGGTTGGGGAAGGGAACTGTCCTGTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CCA 90 bp TGCGCCTGGCCTGTTAATCTGCTACTCTTCATTTGTCCATCCTCTAACAGTAGCAGCTGCAGCGCCTTGTaGAGCCACACCTCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: CAWPVNLLLFICPSSNSSSCSAL*SHTSEP
Trigger: AGGCTCTGAGGTGTGGCTCCACAAGGCGCTGCAGCT...GCTACTGTTAGAGGATGGACAAATGAAGAGTAGCAGATTAACAGGCCAGGCGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR TCA 90 bp TTAGAGCAGGCACTCTTGCTATCAGTCATCCTGTCTCCACAGCTACTGAGAAAATGCCCAGGCTGGTCTTaGACGCCTGGCTTCAAGCGA +
Preference number: 4 (lower is better)
Translates to: LEQALLLSVILSPQLLRKCPGWS*TPGFKR
Trigger: TCGCTTGAAGCCAGGCGTTCAAGACCAGCCTGGGCA...TTTTCTCAGTAGCTGTGGAGACAGGATGACTGATAGCAAGAGTGCCTGCTCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286544.5
CDS-3UTR GCA 90 bp TGTACAGGACAGTTCCCTTCCCCAACCCTCAACAAAGAATTAGGTGGCCCAAAAGGACAGCTCCTCTCCTaGCTCTGTGTCTGCGAAGGA +
Preference number: 4 (lower is better)
Translates to: CTGQFPSPTLNKELGGPKGQLLS*LCVCEG
Trigger: TCCTTCGCAGACACAGAGGCAGGAGAGGAGCTGTCC...TTTTGGGCCACCTAATTCTTTGTTGAGGGTTGGGGAAGGGAACTGTCCTGTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR GCA 90 bp CACCCACTCCATGGACGCATTTATGTTTCTGCACTAGCCCCTTATAGGCATTTGGGACAGCTCCTCTCCTaGCTCTGTGTCTGCGAAGGA +
Preference number: 4 (lower is better)
Translates to: HPLHGRIYVSALAPYRHLGQLLS*LCVCEG
Trigger: TCCTTCGCAGACACAGAGGCAGGAGAGGAGCTGTCC...CAAATGCCTATAAGGGGCTAGTGCAGAAACATAAATGCGTCCATGGAGTGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR GCA 90 bp CACCCACTCCATGGACGCATTTATGTTTCTGCACTAGCCCCTTATAGGCATTTGGGCTTCAGCTGTGGCTaGCAAGTCTCTCTGTCGAGC +
Preference number: 4 (lower is better)
Translates to: HPLHGRIYVSALAPYRHLGFSCG*QVSLSS
Trigger: GCTCGACAGAGAGACTTGGCAGCCACAGCTGAAGCC...CAAATGCCTATAAGGGGCTAGTGCAGAAACATAAATGCGTCCATGGAGTGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR GCA 90 bp TGTACAGGACAGTTCCCTTCCCCAACCCTCAACAAAGAATTAGGTGGCCCAAAAGGCTTCAGCTGTGGCTaGCAAGTCTCTCTGTCGAGC +
Preference number: 4 (lower is better)
Translates to: CTGQFPSPTLNKELGGPKGFSCG*QVSLSS
Trigger: GCTCGACAGAGAGACTTGGCAGCCACAGCTGAAGCC...TTTTGGGCCACCTAATTCTTTGTTGAGGGTTGGGGAAGGGAACTGTCCTGTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CCA 90 bp CAGGTAGTGGCCAGGGATGCTACTAAACATTCTACAATGTACAGGACAGTTCCCCAAGTTTGCTGGCCCTaGGCAAAACCAGCCCATCCC +
Preference number: 4 (lower is better)
Translates to: QVVARDATKHSTMYRTVPQVCWP*AKPAHP
Trigger: GGGATGGGCTGGTTTTGCCCAGGGCCAGCAAACTTG...GGGAACTGTCCTGTACATTGTAGAATGTTTAGTAGCATCCCTGGCCACTACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CCA 90 bp CTACTAAACATTCTACAATGTACAGGACAGTTCCCTTCCCCAACCCTCAACAAAAGAGCCTGCGGGCACTaGACCTGCACCATCCCCCTG +
Preference number: 4 (lower is better)
Translates to: LLNILQCTGQFPSPTLNKRACGH*TCTIPL
Trigger: CAGGGGGATGGTGCAGGTCCAGTGCCCGCAGGCTCT...TTTGTTGAGGGTTGGGGAAGGGAACTGTCCTGTACATTGTAGAATGTTTAGTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CCA 90 bp CACCCACTCCATGGACGCATTTATGTTTCTGCACTAGCCCCTTATAGGCATTTGGCTGGGTCTGAGGCCTaGGAATGTTGGAGGGAAGGT +
Preference number: 4 (lower is better)
Translates to: HPLHGRIYVSALAPYRHLAGSEA*ECWREG
Trigger: ACCTTCCCTCCAACATTCCCAGGCCTCAGACCCAGC...CAAATGCCTATAAGGGGCTAGTGCAGAAACATAAATGCGTCCATGGAGTGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CCA 90 bp TGCGCCTGGCCTGTTAATCTGCTACTCTTCATTTGTCCATCCTCTAACAGTAGCGCTGGGTCTGAGGCCTaGGAATGTTGGAGGGAAGGT +
Preference number: 4 (lower is better)
Translates to: CAWPVNLLLFICPSSNSSAGSEA*ECWREG
Trigger: ACCTTCCCTCCAACATTCCCAGGCCTCAGACCCAGC...GCTACTGTTAGAGGATGGACAAATGAAGAGTAGCAGATTAACAGGCCAGGCGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CCA 90 bp TTAGAGCAGGCACTCTTGCTATCAGTCATCCTGTCTCCACAGCTACTGAGAAAAGGCTGTGCGGGGCTGTaGGTTAGCCCGGTTACTAGA +
Preference number: 4 (lower is better)
Translates to: LEQALLLSVILSPQLLRKGCAGL*VSPVTR
Trigger: TCTAGTAACCGGGCTAACCCACAGCCCCGCACAGCC...TTTTCTCAGTAGCTGTGGAGACAGGATGACTGATAGCAAGAGTGCCTGCTCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286544.5
CDS-3UTR CCA 90 bp CAGGTAGTGGCCAGGGATGCTACTAAACATTCTACAATGTACAGGACAGTTCCCTGTAGCTGGTGGCTGTaGGGAATCCTGCCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: QVVARDATKHSTMYRTVPCSWWL*GILPPS
Trigger: GGAAGGAGGCAGGATTCCCCACAGCCACCAGCTACA...GGGAACTGTCCTGTACATTGTAGAATGTTTAGTAGCATCCCTGGCCACTACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CCA 90 bp CACCCACTCCATGGACGCATTTATGTTTCTGCACTAGCCCCTTATAGGCATTTGCAGAGAACGACTCCTTaGCAGGGGTGTAGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: HPLHGRIYVSALAPYRHLQRTTP*QGCSWW
Trigger: CCACCAGCTACACCCCTGCCAAGGAGTCGTTCTCTG...CAAATGCCTATAAGGGGCTAGTGCAGAAACATAAATGCGTCCATGGAGTGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR TCA 90 bp TGTACAGGACAGTTCCCTTCCCCAACCCTCAACAAAGAATTAGGTGGCCCAAAATCTCCTCCTCTGGGCTaGGGAACTCGTCAAGTTTGC +
Preference number: 4 (lower is better)
Translates to: CTGQFPSPTLNKELGGPKSPPLG*GTRQVC
Trigger: GCAAACTTGACGAGTTCCTCAGCCCAGAGGAGGAGA...TTTTGGGCCACCTAATTCTTTGTTGAGGGTTGGGGAAGGGAACTGTCCTGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR TCA 90 bp CTACTAAACATTCTACAATGTACAGGACAGTTCCCTTCCCCAACCCTCAACAAACTCAAAGGAGGCAGGTaGGCCCAGCCACTCGGCCTT +
Preference number: 4 (lower is better)
Translates to: LLNILQCTGQFPSPTLNKLKGGR*AQPLGL
Trigger: AAGGCCGAGTGGCTGGGCTCACCTGCCTCCTTTGAG...TTTGTTGAGGGTTGGGGAAGGGAACTGTCCTGTACATTGTAGAATGTTTAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR TCA 90 bp CACCCACTCCATGGACGCATTTATGTTTCTGCACTAGCCCCTTATAGGCATTTGTCCTGGTGGCATCTGTaGTGTGCACAGGGAGAGTGT +
Preference number: 4 (lower is better)
Translates to: HPLHGRIYVSALAPYRHLSWWHL*CAQGEC
Trigger: ACACTCTCCCTGTGCACATCACAGATGCCACCAGGA...CAAATGCCTATAAGGGGCTAGTGCAGAAACATAAATGCGTCCATGGAGTGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR TCA 90 bp TGTACAGGACAGTTCCCTTCCCCAACCCTCAACAAAGAATTAGGTGGCCCAAAAACAGCCCGGGTGCCTTaGCCCTTGTTTCTCACAAAG +
Preference number: 4 (lower is better)
Translates to: CTGQFPSPTLNKELGGPKTARVP*PLFLTK
Trigger: CTTTGTGAGAAACAAGGGTCAAGGCACCCGGGCTGT...TTTTGGGCCACCTAATTCTTTGTTGAGGGTTGGGGAAGGGAACTGTCCTGTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR GCA 90 bp ACTAGAAGTTGTAAGTTTTTCATCCCCCATGGGCTAGATCTGATATGCAGATGTGAGCTGACGCTTCTGTaGTGGGAGGGAGGCCGGGAG +
Preference number: 4 (lower is better)
Translates to: TRSCKFFIPHGLDLICRCELTLL*WEGGRE
Trigger: CTCCCGGCCTCCCTCCCAGCACAGAAGCGTCAGCTC...ACATCTGCATATCAGATCTAGCCCATGGGGGATGAAAAACTTACAACTTCTAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR GCA 90 bp CTACTAAACATTCTACAATGTACAGGACAGTTCCCTTCCCCAACCCTCAACAAATGCAGGCACAGGCTGTaGCCGGAACTGCCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: LLNILQCTGQFPSPTLNKCRHRL*PELPVA
Trigger: TGCCACAGGCAGTTCCGGGCACAGCCTGTGCCTGCA...TTTGTTGAGGGTTGGGGAAGGGAACTGTCCTGTACATTGTAGAATGTTTAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR GCA 90 bp CTACTAAACATTCTACAATGTACAGGACAGTTCCCTTCCCCAACCCTCAACAAACCTCTTCTGGATCCCTaGCTGCCTTCGGGCCTCGCT +
Preference number: 4 (lower is better)
Translates to: LLNILQCTGQFPSPTLNKPLLDP*LPSGLA
Trigger: AGCGAGGCCCGAAGGCAGGCAGGGATCCAGAAGAGG...TTTGTTGAGGGTTGGGGAAGGGAACTGTCCTGTACATTGTAGAATGTTTAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR GCA 90 bp CAGGTAGTGGCCAGGGATGCTACTAAACATTCTACAATGTACAGGACAGTTCCCAACCCAAGCTTTTCCTaGTGGGTTCGGGTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: QVVARDATKHSTMYRTVPNPSFS*WVRVAV
Trigger: CACAGCCACCCGAACCCAGCAGGAAAAGCTTGGGTT...GGGAACTGTCCTGTACATTGTAGAATGTTTAGTAGCATCCCTGGCCACTACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR GCA 90 bp TGCGCCTGGCCTGTTAATCTGCTACTCTTCATTTGTCCATCCTCTAACAGTAGCTCCTCCAGCCCAGCCTaGTTCAGGGTGTCTAGATAC +
Preference number: 4 (lower is better)
Translates to: CAWPVNLLLFICPSSNSSSSSPA*FRVSRY
Trigger: GTATCTAGACACCCTGAAGCAGGCTGGGCTGGAGGA...GCTACTGTTAGAGGATGGACAAATGAAGAGTAGCAGATTAACAGGCCAGGCGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CCA 90 bp CACCCACTCCATGGACGCATTTATGTTTCTGCACTAGCCCCTTATAGGCATTTGCACGGTCATTTCAGCTaGACAGAGGCAGCAGCGACA +
Preference number: 4 (lower is better)
Translates to: HPLHGRIYVSALAPYRHLHGHFS*TEAAAT
Trigger: TGTCGCTGCTGCCTCTGTCCAGCTGAAATGACCGTG...CAAATGCCTATAAGGGGCTAGTGCAGAAACATAAATGCGTCCATGGAGTGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CCA 90 bp ACTAGAAGTTGTAAGTTTTTCATCCCCCATGGGCTAGATCTGATATGCAGATGTCTGACGCTTCTGTGCTaGGAGGGAGGCCGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: TRSCKFFIPHGLDLICRCLTLLC*EGGREP
Trigger: AGGCTCCCGGCCTCCCTCCCAGCACAGAAGCGTCAG...ACATCTGCATATCAGATCTAGCCCATGGGGGATGAAAAACTTACAACTTCTAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CCA 90 bp TGTACAGGACAGTTCCCTTCCCCAACCCTCAACAAAGAATTAGGTGGCCCAAAACAGCGTCATGCGGAATaGCCGAGGGACAGTAATGGA +
Preference number: 4 (lower is better)
Translates to: CTGQFPSPTLNKELGGPKQRHAE*PRDSNG
Trigger: TCCATTACTGTCCCTCGGCCATTCCGCATGACGCTG...TTTTGGGCCACCTAATTCTTTGTTGAGGGTTGGGGAAGGGAACTGTCCTGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CCA 90 bp ACTAGAAGTTGTAAGTTTTTCATCCCCCATGGGCTAGATCTGATATGCAGATGTCCTGCCTCCTTCCGGTaGTGGCAGCATCACAGGGCC +
Preference number: 4 (lower is better)
Translates to: TRSCKFFIPHGLDLICRCPASFR*WQHHRA
Trigger: GGCCCTGTGATGCTGCCACCACCGGAAGGAGGCAGG...ACATCTGCATATCAGATCTAGCCCATGGGGGATGAAAAACTTACAACTTCTAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CCA 90 bp CAGGTAGTGGCCAGGGATGCTACTAAACATTCTACAATGTACAGGACAGTTCCCGTGAGCCACTGCGCCTaGCCTGTTAATCTGCTACTC +
Preference number: 4 (lower is better)
Translates to: QVVARDATKHSTMYRTVPVSHCA*PVNLLL
Trigger: GAGTAGCAGATTAACAGGCCAGGCGCAGTGGCTCAC...GGGAACTGTCCTGTACATTGTAGAATGTTTAGTAGCATCCCTGGCCACTACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CCA 90 bp CACCCACTCCATGGACGCATTTATGTTTCTGCACTAGCCCCTTATAGGCATTTGCCGTGTTGGCTGGACTaGTCTCAAACTCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: HPLHGRIYVSALAPYRHLPCWLD*SQTPDL
Trigger: GAGGTCAGGAGTTTGAGACCAGTCCAGCCAACACGG...CAAATGCCTATAAGGGGCTAGTGCAGAAACATAAATGCGTCCATGGAGTGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CCA 90 bp CTACTAAACATTCTACAATGTACAGGACAGTTCCCTTCCCCAACCCTCAACAAAGCTTTGGCGTCTGGTTaGCTTCCAGGGCAGCCTCCG +
Preference number: 4 (lower is better)
Translates to: LLNILQCTGQFPSPTLNKALASG*LPGQPP
Trigger: CGGAGGCTGCCCTGGAAGCCAACCAGACGCCAAAGC...TTTGTTGAGGGTTGGGGAAGGGAACTGTCCTGTACATTGTAGAATGTTTAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651776.1
CDS-3UTR TCA 90 bp CTACTAAACATTCTACAATGTACAGGACAGTTCCCTTCCCCAACCCTCAACAAACCTCGCTGCGCTCCATaGTCTCTTGGTAGAGGGGCA +
Preference number: 4 (lower is better)
Translates to: LLNILQCTGQFPSPTLNKPRCAP*SLGRGA
Trigger: TGCCCCTCTACCAAGAGATCATGGAGCGCAGCGAGG...TTTGTTGAGGGTTGGGGAAGGGAACTGTCCTGTACATTGTAGAATGTTTAGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR GCA 90 bp GATTTACCCTTAGGATTCCATACCAGTAAAACTGAACCGAGGAGTCTTAGGAAATGCGGGCACTGGACCTaGACCATCCCCCTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: DLPLGFHTSKTEPRSLRKCGHWT*TIPLSL
Trigger: CAAGGACAGGGGGATGGTGCAGGTCCAGTGCCCGCA...TTTCCTAAGACTCCTCGGTTCAGTTTTACTGGTATGGAATCCTAAGGGTAAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286544.5
CDS-3UTR GCA 90 bp CACCCACTCCATGGACGCATTTATGTTTCTGCACTAGCCCCTTATAGGCATTTGGTGGCATCTGTGATGTaGACAGGGAGAGTGTTGGCA +
Preference number: 4 (lower is better)
Translates to: HPLHGRIYVSALAPYRHLVASVM*TGRVLA
Trigger: TGCCAACACTCTCCCTGTGCACATCACAGATGCCAC...CAAATGCCTATAAGGGGCTAGTGCAGAAACATAAATGCGTCCATGGAGTGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR GCA 90 bp TGCCTTAGCCCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGACTCTGCTTCCTCCAGCCCAGCCTaGTTCAGGGTGTCTAGATAC +
Preference number: 4 (lower is better)
Translates to: CLSPQQNQNESLKAQDSASSSPA*FRVSRY
Trigger: GTATCTAGACACCCTGAAGCAGGCTGGGCTGGAGGA...AGCAGAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556794.5
CDS-3UTR GCA 90 bp CACCCACTCCATGGACGCATTTATGTTTCTGCACTAGCCCCTTATAGGCATTTGCTTGAACAGCCCGGGTaGCTTGACCCTTGTTTCTCA +
Preference number: 4 (lower is better)
Translates to: HPLHGRIYVSALAPYRHLLEQPG*LDPCFS
Trigger: TGAGAAACAAGGGTCAAGGCACCCGGGCTGTTCAAG...CAAATGCCTATAAGGGGCTAGTGCAGAAACATAAATGCGTCCATGGAGTGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR GCA 90 bp TGTACAGGACAGTTCCCTTCCCCAACCCTCAACAAAGAATTAGGTGGCCCAAAACTTGAACAGCCCGGGTaGCTTGACCCTTGTTTCTCA +
Preference number: 4 (lower is better)
Translates to: CTGQFPSPTLNKELGGPKLEQPG*LDPCFS
Trigger: TGAGAAACAAGGGTCAAGGCACCCGGGCTGTTCAAG...TTTTGGGCCACCTAATTCTTTGTTGAGGGTTGGGGAAGGGAACTGTCCTGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR GCA 90 bp ACTAGAAGTTGTAAGTTTTTCATCCCCCATGGGCTAGATCTGATATGCAGATGTTGCGGGAGTTCTGAGTaGGACGGCGCAGGTCTGCAC +
Preference number: 4 (lower is better)
Translates to: TRSCKFFIPHGLDLICRCCGSSE*DGAGLH
Trigger: GTGCAGACCTGCGCCGTCGCACTCAGAACTCCCGCA...ACATCTGCATATCAGATCTAGCCCATGGGGGATGAAAAACTTACAACTTCTAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000651776.1
CDS-3UTR GCA 90 bp CTACTAAACATTCTACAATGTACAGGACAGTTCCCTTCCCCAACCCTCAACAAACTACGTAGGTGGGCCTaGGGGAGTTCTGAGTGCGAC +
Preference number: 4 (lower is better)
Translates to: LLNILQCTGQFPSPTLNKLRRWA*GSSECD
Trigger: GTCGCACTCAGAACTCCCGCAGGCCCACCTACGTAG...TTTGTTGAGGGTTGGGGAAGGGAACTGTCCTGTACATTGTAGAATGTTTAGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651776.1
CDS-3UTR CCA 90 bp CACCCACTCCATGGACGCATTTATGTTTCTGCACTAGCCCCTTATAGGCATTTGTCTTGGCTTCAGCTGTaGCTGCCAAGTCTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: HPLHGRIYVSALAPYRHLSWLQL*LPSLSV
Trigger: GACAGAGAGACTTGGCAGCCACAGCTGAAGCCAAGA...CAAATGCCTATAAGGGGCTAGTGCAGAAACATAAATGCGTCCATGGAGTGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CCA 90 bp TGTACAGGACAGTTCCCTTCCCCAACCCTCAACAAAGAATTAGGTGGCCCAAAATGGTGGCCTTCTGCTTaGAGATCTTGGCTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: CTGQFPSPTLNKELGGPKWWPSA*RSWLQL
Trigger: CAGCTGAAGCCAAGATCTCCAAGCAGAAGGCCACCA...TTTTGGGCCACCTAATTCTTTGTTGAGGGTTGGGGAAGGGAACTGTCCTGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CCA 90 bp CAGGTAGTGGCCAGGGATGCTACTAAACATTCTACAATGTACAGGACAGTTCCCTGGTGGCCTTCTGCTTaGAGATCTTGGCTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: QVVARDATKHSTMYRTVPWWPSA*RSWLQL
Trigger: CAGCTGAAGCCAAGATCTCCAAGCAGAAGGCCACCA...GGGAACTGTCCTGTACATTGTAGAATGTTTAGTAGCATCCCTGGCCACTACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CCA 90 bp CACCCACTCCATGGACGCATTTATGTTTCTGCACTAGCCCCTTATAGGCATTTGAGGGCTTGTTGCGAGTaGCCTCTTGGGTTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: HPLHGRIYVSALAPYRHLRACCE*PLGFLF
Trigger: GAAGAGAAACCCAAGAGGCCACTCGCAACAAGCCCT...CAAATGCCTATAAGGGGCTAGTGCAGAAACATAAATGCGTCCATGGAGTGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CCA 90 bp GATTTACCCTTAGGATTCCATACCAGTAAAACTGAACCGAGGAGTCTTAGGAAAGAGGGTGGCGCAGGTTaGCGGTCCTCAGCAAGAAGG +
Preference number: 4 (lower is better)
Translates to: DLPLGFHTSKTEPRSLRKEGGAG*RSSARR
Trigger: CCTTCTTGCTGAGGACCGCCAACCTGCGCCACCCTC...TTTCCTAAGACTCCTCGGTTCAGTTTTACTGGTATGGAATCCTAAGGGTAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286544.5
CDS-3UTR CCA 90 bp TGTACAGGACAGTTCCCTTCCCCAACCCTCAACAAAGAATTAGGTGGCCCAAAATTTGGTTGTCACAGCTaGGGAGAGGGGTACTACTGG +
Preference number: 4 (lower is better)
Translates to: CTGQFPSPTLNKELGGPKFGCHS*GEGYYW
Trigger: CCAGTAGTACCCCTCTCCCCAGCTGTGACAACCAAA...TTTTGGGCCACCTAATTCTTTGTTGAGGGTTGGGGAAGGGAACTGTCCTGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CCA 90 bp CCTGCCTTGACTCAAACCCAAGTTAGCTGCTTAATATTTTTCAAAAGCAGTAATCGCAGGTCTGCACCATaGCGGCCCGGCTTGTCAGCC +
Preference number: 4 (lower is better)
Translates to: PALTQTQVSCLIFFKSSNRRSAP*RPGLSA
Trigger: GGCTGACAAGCCGGGCCGCCATGGTGCAGACCTGCG...ATTACTGCTTTTGAAAAATATTAAGCAGCTAACTTGGGTTTGAGTCAAGGCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651776.1
CDS-3UTR TCA 90 bp CACCCACTCCATGGACGCATTTATGTTTCTGCACTAGCCCCTTATAGGCATTTGCCTTCTCCAGGAAGCTaGAGGGCTTCAAAGAAGAGA +
Preference number: 4 (lower is better)
Translates to: HPLHGRIYVSALAPYRHLPSPGS*RASKKR
Trigger: TCTCTTCTTTGAAGCCCTTCAGCTTCCTGGAGAAGG...CAAATGCCTATAAGGGGCTAGTGCAGAAACATAAATGCGTCCATGGAGTGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR GCA 90 bp GATTTACCCTTAGGATTCCATACCAGTAAAACTGAACCGAGGAGTCTTAGGAAAGGTTGTTCAGGGAGCTaGAGCGCCTTGTGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: DLPLGFHTSKTEPRSLRKGCSGS*SALWSH
Trigger: GTGGCTCCACAAGGCGCTGCAGCTCCCTGAACAACC...TTTCCTAAGACTCCTCGGTTCAGTTTTACTGGTATGGAATCCTAAGGGTAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286544.5
CDS-3UTR GCA 90 bp CCTGCCTTGACTCAAACCCAAGTTAGCTGCTTAATATTTTTCAAAAGCAGTAATGAGCTGACGCTTCTGTaGTGGGAGGGAGGCCGGGAG +
Preference number: 4 (lower is better)
Translates to: PALTQTQVSCLIFFKSSNELTLL*WEGGRE
Trigger: CTCCCGGCCTCCCTCCCAGCACAGAAGCGTCAGCTC...ATTACTGCTTTTGAAAAATATTAAGCAGCTAACTTGGGTTTGAGTCAAGGCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR GCA 90 bp TGCGCCTGGCCTGTTAATCTGCTACTCTTCATTTGTCCATCCTCTAACAGTAGCCTTCTGGTGGCCTTCTaGTTGGAGATCTTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: CAWPVNLLLFICPSSNSSLLVAF*LEILAS
Trigger: TGAAGCCAAGATCTCCAAGCAGAAGGCCACCAGAAG...GCTACTGTTAGAGGATGGACAAATGAAGAGTAGCAGATTAACAGGCCAGGCGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR GCA 90 bp GTGCTGACTCCTGGAAGAGCAACTCTATCTGATCTCAAAATGCGTATACTGGGACTTGAACAGCCCGGGTaGCTTGACCCTTGTTTCTCA +
Preference number: 4 (lower is better)
Translates to: VLTPGRATLSDLKMRILGLEQPG*LDPCFS
Trigger: TGAGAAACAAGGGTCAAGGCACCCGGGCTGTTCAAG...TCCCAGTATACGCATTTTGAGATCAGATAGAGTTGCTCTTCCAGGAGTCAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556794.5
CDS-3UTR GCA 90 bp CCTGCCTTGACTCAAACCCAAGTTAGCTGCTTAATATTTTTCAAAAGCAGTAATCGGCTTGTCAGCCGATaGGGGGCTGTGCGTGCAGCT +
Preference number: 4 (lower is better)
Translates to: PALTQTQVSCLIFFKSSNRLVSR*GAVRAA
Trigger: AGCTGCACGCACAGCCCCGCATCGGCTGACAAGCCG...ATTACTGCTTTTGAAAAATATTAAGCAGCTAACTTGGGTTTGAGTCAAGGCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000651776.1
CDS-3UTR CCA 90 bp TGTACAGGACAGTTCCCTTCCCCAACCCTCAACAAAGAATTAGGTGGCCCAAAAATCTATCTCCTCCTCTaGGCTGAGGAACTCGTCAAG +
Preference number: 4 (lower is better)
Translates to: CTGQFPSPTLNKELGGPKIYLLL*AEELVK
Trigger: CTTGACGAGTTCCTCAGCCCAGAGGAGGAGATAGAT...TTTTGGGCCACCTAATTCTTTGTTGAGGGTTGGGGAAGGGAACTGTCCTGTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CCA 90 bp TTAGAGCAGGCACTCTTGCTATCAGTCATCCTGTCTCCACAGCTACTGAGAAAACCCCTGTCCTTGTCTTaGAAGAAACTCTCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: LEQALLLSVILSPQLLRKPLSLS*KKLSRS
Trigger: GGACCTGGAGAGTTTCTTCCAAGACAAGGACAGGGG...TTTTCTCAGTAGCTGTGGAGACAGGATGACTGATAGCAAGAGTGCCTGCTCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286544.5
CDS-3UTR CCA 90 bp TGTACAGGACAGTTCCCTTCCCCAACCCTCAACAAAGAATTAGGTGGCCCAAAAAAGAGCTCAGCTTCCTaGAGTTTATCCCCAAGGGCT +
Preference number: 4 (lower is better)
Translates to: CTGQFPSPTLNKELGGPKKSSAS*SLSPRA
Trigger: AGCCCTTGGGGATAAACTCCAGGAAGCTGAGCTCTT...TTTTGGGCCACCTAATTCTTTGTTGAGGGTTGGGGAAGGGAACTGTCCTGTACA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CCA 90 bp CAACAAAGAATTAGGTGGCCCAAAATATTAATAGCACTGAGGATAAGAAATCCTCCTGCTGGGTTCGGGTaGCTGTGCGGGGCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: QQRIRWPKILIALRIRNPPAGFG*LCGAVG
Trigger: ACCCACAGCCCCGCACAGCCACCCGAACCCAGCAGG...AGGATTTCTTATCCTCAGTGCTATTAATATTTTGGGCCACCTAATTCTTTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CCA 90 bp CCTGCCTTGACTCAAACCCAAGTTAGCTGCTTAATATTTTTCAAAAGCAGTAATGCCTCCTTCCGGTGGTaGCAGCATCACAGGGCCGCT +
Preference number: 4 (lower is better)
Translates to: PALTQTQVSCLIFFKSSNASFRW*QHHRAA
Trigger: AGCGGCCCTGTGATGCTGCCACCACCGGAAGGAGGC...ATTACTGCTTTTGAAAAATATTAAGCAGCTAACTTGGGTTTGAGTCAAGGCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CCA 90 bp CCTGCCTTGACTCAAACCCAAGTTAGCTGCTTAATATTTTTCAAAAGCAGTAATCCTGCCTCCTTCCGGTaGTGGCAGCATCACAGGGCC +
Preference number: 4 (lower is better)
Translates to: PALTQTQVSCLIFFKSSNPASFR*WQHHRA
Trigger: GGCCCTGTGATGCTGCCACCACCGGAAGGAGGCAGG...ATTACTGCTTTTGAAAAATATTAAGCAGCTAACTTGGGTTTGAGTCAAGGCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CCA 90 bp ACTAGAAGTTGTAAGTTTTTCATCCCCCATGGGCTAGATCTGATATGCAGATGTGACGCACTACGTAGGTaGGCCTGCGGGAGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: TRSCKFFIPHGLDLICRCDALRR*ACGSSE
Trigger: CTCAGAACTCCCGCAGGCCCACCTACGTAGTGCGTC...ACATCTGCATATCAGATCTAGCCCATGGGGGATGAAAAACTTACAACTTCTAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000651776.1
CDS-3UTR CCA 90 bp CTACTAAACATTCTACAATGTACAGGACAGTTCCCTTCCCCAACCCTCAACAAATCTAGCTTTGGCGTCTaGTTGGCTTCCAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: LLNILQCTGQFPSPTLNKSSFGV*LASRAA
Trigger: GGCTGCCCTGGAAGCCAACCAGACGCCAAAGCTAGA...TTTGTTGAGGGTTGGGGAAGGGAACTGTCCTGTACATTGTAGAATGTTTAGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651776.1
CDS-3UTR TCA 90 bp TGCGCCTGGCCTGTTAATCTGCTACTCTTCATTTGTCCATCCTCTAACAGTAGCTACGAGATTTTCTGGTaGCTGATGAGACAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: CAWPVNLLLFICPSSNSSYEIFW*LMRQLL
Trigger: GAGGAGCTGTCTCATCAGTCACCAGAAAATCTCGTA...GCTACTGTTAGAGGATGGACAAATGAAGAGTAGCAGATTAACAGGCCAGGCGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR TCA 90 bp GTGAATTTGATTATGTGTTGGCTGAAGTTCTTCATTCTGACTGTTGAGGGGAGGCCCCTTGGCCCAGGCTaGGGTACTATCTTGTCCTAT +
Preference number: 4 (lower is better)
Translates to: VNLIMCWLKFFILTVEGRPLGPG*GTILSY
Trigger: ATAGGACAAGATAGTACCTCAGCCTGGGCCAAGGGG...CCTCCCCTCAACAGTCAGAATGAAGAACTTCAGCCAACACATAATCAAATTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556794.5
CDS-3UTR TCA 90 bp GATTTACCCTTAGGATTCCATACCAGTAAAACTGAACCGAGGAGTCTTAGGAAACATGAGCGTGGGTGCTaGCTCCTGGAAGAGCAACTC +
Preference number: 4 (lower is better)
Translates to: DLPLGFHTSKTEPRSLRKHERGC*LLEEQL
Trigger: GAGTTGCTCTTCCAGGAGTCAGCACCCACGCTCATG...TTTCCTAAGACTCCTCGGTTCAGTTTTACTGGTATGGAATCCTAAGGGTAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556794.5
CDS-3UTR TCA 90 bp ACAGAGCTTCACCAGGAAGTTGAGTTTTCAAGATGCCTTGTTGCTTTGAAGAAGACTGAAAGACGGACATaGGCGTGGGTGCTGACTCCT +
Preference number: 4 (lower is better)
Translates to: TELHQEVEFSRCLVALKKTERRT*AWVLTP
Trigger: AGGAGTCAGCACCCACGCTCATGTCCGTCTTTCAGT...CTTCTTCAAAGCAACAAGGCATCTTGAAAACTCAACTTCCTGGTGAAGCTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556794.5
CDS-3UTR GCA 90 bp CCTGCCTTGACTCAAACCCAAGTTAGCTGCTTAATATTTTTCAAAAGCAGTAATGGGCAGGTAGACATGTaGAGGCACAGGCTGTGCCCG +
Preference number: 4 (lower is better)
Translates to: PALTQTQVSCLIFFKSSNGQVDM*RHRLCP
Trigger: CGGGCACAGCCTGTGCCTGCACATGTCTACCTGCCC...ATTACTGCTTTTGAAAAATATTAAGCAGCTAACTTGGGTTTGAGTCAAGGCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR GCA 90 bp TGTACAGGACAGTTCCCTTCCCCAACCCTCAACAAAGAATTAGGTGGCCCAAAAAAGTGCACTTCTGACTaGAGATTCCCTCTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: CTGQFPSPTLNKELGGPKKCTSD*RFPLPG
Trigger: ACCAGGAAGAGGGAATCTGCAGTCAGAAGTGCACTT...TTTTGGGCCACCTAATTCTTTGTTGAGGGTTGGGGAAGGGAACTGTCCTGTACA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR GCA 90 bp CAGGTAGTGGCCAGGGATGCTACTAAACATTCTACAATGTACAGGACAGTTCCCGATCCTTCTAAACCCTaGTCTGGATCTCTGATGCTG +
Preference number: 4 (lower is better)
Translates to: QVVARDATKHSTMYRTVPDPSKP*SGSLML
Trigger: CAGCATCAGAGATCCAGAGCAGGGTTTAGAAGGATC...GGGAACTGTCCTGTACATTGTAGAATGTTTAGTAGCATCCCTGGCCACTACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CCA 90 bp CAGGTAGTGGCCAGGGATGCTACTAAACATTCTACAATGTACAGGACAGTTCCCTTGCGAGTGGCCTCTTaGGTTTCTCTTCTTTTGGCT +
Preference number: 4 (lower is better)
Translates to: QVVARDATKHSTMYRTVPLRVAS*VSLLLA
Trigger: AGCCAAAAGAAGAGAAACCCAAGAGGCCACTCGCAA...GGGAACTGTCCTGTACATTGTAGAATGTTTAGTAGCATCCCTGGCCACTACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CCA 90 bp GATTTACCCTTAGGATTCCATACCAGTAAAACTGAACCGAGGAGTCTTAGGAAATGTAGCTGGTGGCTGTaGGGAATCCTGCCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: DLPLGFHTSKTEPRSLRKCSWWL*GILPPS
Trigger: GGAAGGAGGCAGGATTCCCCACAGCCACCAGCTACA...TTTCCTAAGACTCCTCGGTTCAGTTTTACTGGTATGGAATCCTAAGGGTAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286544.5
CDS-3UTR CCA 90 bp TTAGAGCAGGCACTCTTGCTATCAGTCATCCTGTCTCCACAGCTACTGAGAAAACAGGCTGGAGTGCTGTaGAGTGATCTCAGCTCATTA +
Preference number: 4 (lower is better)
Translates to: LEQALLLSVILSPQLLRKQAGVL*SDLSSL
Trigger: TAATGAGCTGAGATCACTCCACAGCACTCCAGCCTG...TTTTCTCAGTAGCTGTGGAGACAGGATGACTGATAGCAAGAGTGCCTGCTCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286544.5
CDS-3UTR CCA 90 bp CAGGTAGTGGCCAGGGATGCTACTAAACATTCTACAATGTACAGGACAGTTCCCGGTTCGTTTTCCGATTaGCCTATTTTCTCCGCGCAT +
Preference number: 4 (lower is better)
Translates to: QVVARDATKHSTMYRTVPGSFSD*PIFSAH
Trigger: ATGCGCGGAGAAAATAGGCCAATCGGAAAACGAACC...GGGAACTGTCCTGTACATTGTAGAATGTTTAGTAGCATCCCTGGCCACTACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651776.1
CDS-3UTR TCA 90 bp GATTTACCCTTAGGATTCCATACCAGTAAAACTGAACCGAGGAGTCTTAGGAAATCTCCTCCTCTGGGCTaGGGAACTCGTCAAGTTTGC +
Preference number: 4 (lower is better)
Translates to: DLPLGFHTSKTEPRSLRKSPPLG*GTRQVC
Trigger: GCAAACTTGACGAGTTCCTCAGCCCAGAGGAGGAGA...TTTCCTAAGACTCCTCGGTTCAGTTTTACTGGTATGGAATCCTAAGGGTAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286544.5
CDS-3UTR TCA 90 bp ACTAGAAGTTGTAAGTTTTTCATCCCCCATGGGCTAGATCTGATATGCAGATGTAGGGACAGTAATGGATaGTGCCCAGGAGCTGACGCT +
Preference number: 4 (lower is better)
Translates to: TRSCKFFIPHGLDLICRCRDSNG*CPGADA
Trigger: AGCGTCAGCTCCTGGGCATCATCCATTACTGTCCCT...ACATCTGCATATCAGATCTAGCCCATGGGGGATGAAAAACTTACAACTTCTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR TCA 90 bp ACTAGAAGTTGTAAGTTTTTCATCCCCCATGGGCTAGATCTGATATGCAGATGTTCCTGGTGGCATCTGTaGTGTGCACAGGGAGAGTGT +
Preference number: 4 (lower is better)
Translates to: TRSCKFFIPHGLDLICRCSWWHL*CAQGEC
Trigger: ACACTCTCCCTGTGCACATCACAGATGCCACCAGGA...ACATCTGCATATCAGATCTAGCCCATGGGGGATGAAAAACTTACAACTTCTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR TCA 90 bp CAGGTAGTGGCCAGGGATGCTACTAAACATTCTACAATGTACAGGACAGTTCCCTGTATCTCCAGCCACTaGATACTCTCATCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: QVVARDATKHSTMYRTVPCISSH*ILSSAL
Trigger: CAAAGCAGATGAGAGTATTCAGTGGCTGGAGATACA...GGGAACTGTCCTGTACATTGTAGAATGTTTAGTAGCATCCCTGGCCACTACCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR TCA 90 bp ACTAGAAGTTGTAAGTTTTTCATCCCCCATGGGCTAGATCTGATATGCAGATGTACAGCCCGGGTGCCTTaGCCCTTGTTTCTCACAAAG +
Preference number: 4 (lower is better)
Translates to: TRSCKFFIPHGLDLICRCTARVP*PLFLTK
Trigger: CTTTGTGAGAAACAAGGGTCAAGGCACCCGGGCTGT...ACATCTGCATATCAGATCTAGCCCATGGGGGATGAAAAACTTACAACTTCTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR TCA 90 bp TTAGAGCAGGCACTCTTGCTATCAGTCATCCTGTCTCCACAGCTACTGAGAAAATACGAGATTTTCTGGTaGCTGATGAGACAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: LEQALLLSVILSPQLLRKYEIFW*LMRQLL
Trigger: GAGGAGCTGTCTCATCAGTCACCAGAAAATCTCGTA...TTTTCTCAGTAGCTGTGGAGACAGGATGACTGATAGCAAGAGTGCCTGCTCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286544.5
CDS-3UTR TCA 90 bp GATTTACCCTTAGGATTCCATACCAGTAAAACTGAACCGAGGAGTCTTAGGAAACCCACCTCAGCCTCCTaGATAGCTAGGACTATAGGC +
Preference number: 4 (lower is better)
Translates to: DLPLGFHTSKTEPRSLRKPTSAS*IARTIG
Trigger: GCCTATAGTCCTAGCTATTCAGGAGGCTGAGGTGGG...TTTCCTAAGACTCCTCGGTTCAGTTTTACTGGTATGGAATCCTAAGGGTAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286544.5
CDS-3UTR GCA 90 bp CAGGTAGTGGCCAGGGATGCTACTAAACATTCTACAATGTACAGGACAGTTCCCCACCATCTCCCTTTCTaGTTCAGTTCCTGTAAGTTC +
Preference number: 4 (lower is better)
Translates to: QVVARDATKHSTMYRTVPHHLPF*FSSCKF
Trigger: GAACTTACAGGAACTGAAGCAGAAAGGGAGATGGTG...GGGAACTGTCCTGTACATTGTAGAATGTTTAGTAGCATCCCTGGCCACTACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR GCA 90 bp CCTGCCTTGACTCAAACCCAAGTTAGCTGCTTAATATTTTTCAAAAGCAGTAATGGTTGTTCAGGGAGCTaGAGCGCCTTGTGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: PALTQTQVSCLIFFKSSNGCSGS*SALWSH
Trigger: GTGGCTCCACAAGGCGCTGCAGCTCCCTGAACAACC...ATTACTGCTTTTGAAAAATATTAAGCAGCTAACTTGGGTTTGAGTCAAGGCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR GCA 90 bp CAACAAAGAATTAGGTGGCCCAAAATATTAATAGCACTGAGGATAAGAAATCCTCCTCTTCTGGATCCCTaGCTGCCTTCGGGCCTCGCT +
Preference number: 4 (lower is better)
Translates to: QQRIRWPKILIALRIRNPPLLDP*LPSGLA
Trigger: AGCGAGGCCCGAAGGCAGGCAGGGATCCAGAAGAGG...AGGATTTCTTATCCTCAGTGCTATTAATATTTTGGGCCACCTAATTCTTTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR GCA 90 bp CTACTAAACATTCTACAATGTACAGGACAGTTCCCTTCCCCAACCCTCAACAAAGCAAGAAGGGCTTGTTaGGAGTGGCCTCTTGGGTTT +
Preference number: 4 (lower is better)
Translates to: LLNILQCTGQFPSPTLNKARRAC*EWPLGF
Trigger: AAACCCAAGAGGCCACTCGCAACAAGCCCTTCTTGC...TTTGTTGAGGGTTGGGGAAGGGAACTGTCCTGTACATTGTAGAATGTTTAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR GCA 90 bp CAACAAAGAATTAGGTGGCCCAAAATATTAATAGCACTGAGGATAAGAAATCCTGGCTGTGGGGAATCCTaGCTCCTTCCGGTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: QQRIRWPKILIALRIRNPGCGES*LLPVVA
Trigger: TGCCACCACCGGAAGGAGGCAGGATTCCCCACAGCC...AGGATTTCTTATCCTCAGTGCTATTAATATTTTGGGCCACCTAATTCTTTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR GCA 90 bp GATTTACCCTTAGGATTCCATACCAGTAAAACTGAACCGAGGAGTCTTAGGAAATCCTCCAGCCCAGCCTaGTTCAGGGTGTCTAGATAC +
Preference number: 4 (lower is better)
Translates to: DLPLGFHTSKTEPRSLRKSSSPA*FRVSRY
Trigger: GTATCTAGACACCCTGAAGCAGGCTGGGCTGGAGGA...TTTCCTAAGACTCCTCGGTTCAGTTTTACTGGTATGGAATCCTAAGGGTAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000556794.5
CDS-3UTR GCA 90 bp TGTACAGGACAGTTCCCTTCCCCAACCCTCAACAAAGAATTAGGTGGCCCAAAAAACCCAAGTTTTCCCTaGCTTGACTCAAACCCAAGT +
Preference number: 4 (lower is better)
Translates to: CTGQFPSPTLNKELGGPKNPSFP*LDSNPS
Trigger: ACTTGGGTTTGAGTCAAGGCAGGGAAAACTTGGGTT...TTTTGGGCCACCTAATTCTTTGTTGAGGGTTGGGGAAGGGAACTGTCCTGTACA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR GCA 90 bp GAGCAACTCTATCTGATCTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCATACTGGGAACAGGATaGCTTAGCCCACAACAGAAC +
Preference number: 4 (lower is better)
Translates to: EQLYLISKCVYWEQDALAILGTG*LSPQQN
Trigger: GTTCTGTTGTGGGCTAAGGCATCCTGTTCCCAGTAT...GGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGATAGAGTTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556794.5
CDS-3UTR GCA 90 bp CCTGCCTTGACTCAAACCCAAGTTAGCTGCTTAATATTTTTCAAAAGCAGTAATGGGACGGGATTGGAGTaGTCTGCTCCGGACGCACTA +
Preference number: 4 (lower is better)
Translates to: PALTQTQVSCLIFFKSSNGTGLE*SAPDAL
Trigger: TAGTGCGTCCGGAGCAGAGCACTCCAATCCCGTCCC...ATTACTGCTTTTGAAAAATATTAAGCAGCTAACTTGGGTTTGAGTCAAGGCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651776.1
CDS-3UTR CCA 90 bp ACTAGAAGTTGTAAGTTTTTCATCCCCCATGGGCTAGATCTGATATGCAGATGTACTCGTCAAGTTTGCTaGCCCTGGGCAAAACCAGCC +
Preference number: 4 (lower is better)
Translates to: TRSCKFFIPHGLDLICRCTRQVC*PWAKPA
Trigger: GGCTGGTTTTGCCCAGGGCCAGCAAACTTGACGAGT...ACATCTGCATATCAGATCTAGCCCATGGGGGATGAAAAACTTACAACTTCTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CCA 90 bp CTACTAAACATTCTACAATGTACAGGACAGTTCCCTTCCCCAACCCTCAACAAACCCCTGTCCTTGTCTTaGAAGAAACTCTCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: LLNILQCTGQFPSPTLNKPLSLS*KKLSRS
Trigger: GGACCTGGAGAGTTTCTTCCAAGACAAGGACAGGGG...TTTGTTGAGGGTTGGGGAAGGGAACTGTCCTGTACATTGTAGAATGTTTAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CCA 90 bp ACTAGAAGTTGTAAGTTTTTCATCCCCCATGGGCTAGATCTGATATGCAGATGTCAGCGTCATGCGGAATaGCCGAGGGACAGTAATGGA +
Preference number: 4 (lower is better)
Translates to: TRSCKFFIPHGLDLICRCQRHAE*PRDSNG
Trigger: TCCATTACTGTCCCTCGGCCATTCCGCATGACGCTG...ACATCTGCATATCAGATCTAGCCCATGGGGGATGAAAAACTTACAACTTCTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CCA 90 bp CACCCACTCCATGGACGCATTTATGTTTCTGCACTAGCCCCTTATAGGCATTTGTCCAGGGCTCTCATTTaGATGCGAATTTTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: HPLHGRIYVSALAPYRHLSRALI*MRIFLK
Trigger: CTTCAGGAAAATTCGCATCCAAATGAGAGCCCTGGA...CAAATGCCTATAAGGGGCTAGTGCAGAAACATAAATGCGTCCATGGAGTGGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CCA 90 bp CAACAAAGAATTAGGTGGCCCAAAATATTAATAGCACTGAGGATAAGAAATCCTGAGGGTGGCGCAGGTTaGCGGTCCTCAGCAAGAAGG +
Preference number: 4 (lower is better)
Translates to: QQRIRWPKILIALRIRNPEGGAG*RSSARR
Trigger: CCTTCTTGCTGAGGACCGCCAACCTGCGCCACCCTC...AGGATTTCTTATCCTCAGTGCTATTAATATTTTGGGCCACCTAATTCTTTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CCA 90 bp CACCCACTCCATGGACGCATTTATGTTTCTGCACTAGCCCCTTATAGGCATTTGGTTTTTCATCCCCCATaGGCTAGATCTGATATGCAG +
Preference number: 4 (lower is better)
Translates to: HPLHGRIYVSALAPYRHLVFHPP*ARSDMQ
Trigger: CTGCATATCAGATCTAGCCCATGGGGGATGAAAAAC...CAAATGCCTATAAGGGGCTAGTGCAGAAACATAAATGCGTCCATGGAGTGGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CCA 90 bp TGCGCCTGGCCTGTTAATCTGCTACTCTTCATTTGTCCATCCTCTAACAGTAGCATCTGGAGACATTTTTaGTTGTCACAGCTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: CAWPVNLLLFICPSSNSSIWRHF*LSQLGR
Trigger: TCTCCCCAGCTGTGACAACCAAAAATGTCTCCAGAT...GCTACTGTTAGAGGATGGACAAATGAAGAGTAGCAGATTAACAGGCCAGGCGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
3UTR CAA 72 bp GGATGCCTTAGCCCACAACAGAACCAGAATGAATCTTaGAAGGCACAAGACTCTGCTTTTGCCACTCTTCCT +
Preference number: 4 (lower is better)
Translates to: GCLSPQQNQNES*KAQDSAFATLP
Trigger: AGGAAGAGTGGCAAAAGCAGAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556794.5
CDS-3UTR TCA 90 bp CTACTAAACATTCTACAATGTACAGGACAGTTCCCTTCCCCAACCCTCAACAAACTCTCTGGGTCAGACTaGAAGAGAGACTCCAACAGA +
Preference number: 4 (lower is better)
Translates to: LLNILQCTGQFPSPTLNKLSGSD*KRDSNR
Trigger: TCTGTTGGAGTCTCTCTTTCAGTCTGACCCAGAGAG...TTTGTTGAGGGTTGGGGAAGGGAACTGTCCTGTACATTGTAGAATGTTTAGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR TCA 90 bp CTACTAAACATTCTACAATGTACAGGACAGTTCCCTTCCCCAACCCTCAACAAACCTTCTCCAGGAAGCTaGAGGGCTTCAAAGAAGAGA +
Preference number: 4 (lower is better)
Translates to: LLNILQCTGQFPSPTLNKPSPGS*RASKKR
Trigger: TCTCTTCTTTGAAGCCCTTCAGCTTCCTGGAGAAGG...TTTGTTGAGGGTTGGGGAAGGGAACTGTCCTGTACATTGTAGAATGTTTAGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR TCA 90 bp TTAGAGCAGGCACTCTTGCTATCAGTCATCCTGTCTCCACAGCTACTGAGAAAATGTATCTCCAGCCACTaGATACTCTCATCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: LEQALLLSVILSPQLLRKCISSH*ILSSAL
Trigger: CAAAGCAGATGAGAGTATTCAGTGGCTGGAGATACA...TTTTCTCAGTAGCTGTGGAGACAGGATGACTGATAGCAAGAGTGCCTGCTCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286544.5
CDS-3UTR TCA 90 bp AAAGTGAATTTGATTATGTGTTGGCTGAAGTTCTTCATTCTGACTGTTGAGGGGACAGCCCGGGTGCCTTaGCCCTTGTTTCTCACAAAG +
Preference number: 4 (lower is better)
Translates to: KVNLIMCWLKFFILTVEGTARVP*PLFLTK
Trigger: CTTTGTGAGAAACAAGGGTCAAGGCACCCGGGCTGT...CCCCTCAACAGTCAGAATGAAGAACTTCAGCCAACACATAATCAAATTCACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556794.5
CDS-3UTR TCA 90 bp GTGAATTTGATTATGTGTTGGCTGAAGTTCTTCATTCTGACTGTTGAGGGGAGGCAAGGAATGAAGCAATaGCTGTGGGCTGGGAAACTG +
Preference number: 4 (lower is better)
Translates to: VNLIMCWLKFFILTVEGRQGMKQ*LWAGKL
Trigger: CAGTTTCCCAGCCCACAGTCATTGCTTCATTCCTTG...CCTCCCCTCAACAGTCAGAATGAAGAACTTCAGCCAACACATAATCAAATTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556794.5
CDS-3UTR TCA 90 bp CCTGCCTTGACTCAAACCCAAGTTAGCTGCTTAATATTTTTCAAAAGCAGTAATTTTTATTTCCGGTTCTaGGGACGCCGCGGAAGCGGG +
Preference number: 4 (lower is better)
Translates to: PALTQTQVSCLIFFKSSNFYFRF*GRRGSG
Trigger: CCCGCTTCCGCGGCGTCCTCAGAACCGGAAATAAAA...ATTACTGCTTTTGAAAAATATTAAGCAGCTAACTTGGGTTTGAGTCAAGGCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000651776.1
CDS-3UTR GCA 90 bp CAGGTAGTGGCCAGGGATGCTACTAAACATTCTACAATGTACAGGACAGTTCCCCCTGGCCTGTTAATCTaGTACTCTTCATTTGTCCAT +
Preference number: 4 (lower is better)
Translates to: QVVARDATKHSTMYRTVPPGLLI*YSSFVH
Trigger: ATGGACAAATGAAGAGTAGCAGATTAACAGGCCAGG...GGGAACTGTCCTGTACATTGTAGAATGTTTAGTAGCATCCCTGGCCACTACCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CCA 90 bp CCTGCCTTGACTCAAACCCAAGTTAGCTGCTTAATATTTTTCAAAAGCAGTAATCAAGTTTGCTGGCCCTaGGCAAAACCAGCCCATCCC +
Preference number: 4 (lower is better)
Translates to: PALTQTQVSCLIFFKSSNQVCWP*AKPAHP
Trigger: GGGATGGGCTGGTTTTGCCCAGGGCCAGCAAACTTG...ATTACTGCTTTTGAAAAATATTAAGCAGCTAACTTGGGTTTGAGTCAAGGCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CCA 90 bp CAACAAAGAATTAGGTGGCCCAAAATATTAATAGCACTGAGGATAAGAAATCCTAGCTGCAGCGCCTTGTaGAGCCACACCTCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: QQRIRWPKILIALRIRNPSCSAL*SHTSEP
Trigger: AGGCTCTGAGGTGTGGCTCCACAAGGCGCTGCAGCT...AGGATTTCTTATCCTCAGTGCTATTAATATTTTGGGCCACCTAATTCTTTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CCA 90 bp CAACAAAGAATTAGGTGGCCCAAAATATTAATAGCACTGAGGATAAGAAATCCTGGCTGTGCGGGGCTGTaGGTTAGCCCGGTTACTAGA +
Preference number: 4 (lower is better)
Translates to: QQRIRWPKILIALRIRNPGCAGL*VSPVTR
Trigger: TCTAGTAACCGGGCTAACCCACAGCCCCGCACAGCC...AGGATTTCTTATCCTCAGTGCTATTAATATTTTGGGCCACCTAATTCTTTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CCA 90 bp GATTTACCCTTAGGATTCCATACCAGTAAAACTGAACCGAGGAGTCTTAGGAAACCTCCAGTACTTTCCTaGGGCTTGCAGGCTGTTCTA +
Preference number: 4 (lower is better)
Translates to: DLPLGFHTSKTEPRSLRKPPVLS*GLQAVL
Trigger: TAGAACAGCCTGCAAGCCCCAGGAAAGTACTGGAGG...TTTCCTAAGACTCCTCGGTTCAGTTTTACTGGTATGGAATCCTAAGGGTAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286544.5
CDS-3UTR CCA 90 bp CTACTAAACATTCTACAATGTACAGGACAGTTCCCTTCCCCAACCCTCAACAAACAGGCTGGAGTGCTGTaGAGTGATCTCAGCTCATTA +
Preference number: 4 (lower is better)
Translates to: LLNILQCTGQFPSPTLNKQAGVL*SDLSSL
Trigger: TAATGAGCTGAGATCACTCCACAGCACTCCAGCCTG...TTTGTTGAGGGTTGGGGAAGGGAACTGTCCTGTACATTGTAGAATGTTTAGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CCA 90 bp TTAGAGCAGGCACTCTTGCTATCAGTCATCCTGTCTCCACAGCTACTGAGAAAAGTTTTTCATCCCCCATaGGCTAGATCTGATATGCAG +
Preference number: 4 (lower is better)
Translates to: LEQALLLSVILSPQLLRKVFHPP*ARSDMQ
Trigger: CTGCATATCAGATCTAGCCCATGGGGGATGAAAAAC...TTTTCTCAGTAGCTGTGGAGACAGGATGACTGATAGCAAGAGTGCCTGCTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000286544.5
CDS-3UTR TCA 90 bp CTACTAAACATTCTACAATGTACAGGACAGTTCCCTTCCCCAACCCTCAACAAATTTCAAGTGCACTTCTaGCTGCAGATTCCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: LLNILQCTGQFPSPTLNKFQVHF*LQIPSS
Trigger: GGAAGAGGGAATCTGCAGTCAGAAGTGCACTTGAAA...TTTGTTGAGGGTTGGGGAAGGGAACTGTCCTGTACATTGTAGAATGTTTAGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR TCA 90 bp CAGGTAGTGGCCAGGGATGCTACTAAACATTCTACAATGTACAGGACAGTTCCCACCTGGGAAAATCCTTaGTTTTGGTCTCTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: QVVARDATKHSTMYRTVPTWENP*FWSLSL
Trigger: AAGAGAAAGAGACCAAAATCAAGGATTTTCCCAGGT...GGGAACTGTCCTGTACATTGTAGAATGTTTAGTAGCATCCCTGGCCACTACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR TCA 90 bp TGTACAGGACAGTTCCCTTCCCCAACCCTCAACAAAGAATTAGGTGGCCCAAAATATTCCAGCAGGATTTaGTACTTTCCAGTGTCTACT +
Preference number: 4 (lower is better)
Translates to: CTGQFPSPTLNKELGGPKYSSRI*YFPVST
Trigger: AGTAGACACTGGAAAGTATCAAATCCTGCTGGAATA...TTTTGGGCCACCTAATTCTTTGTTGAGGGTTGGGGAAGGGAACTGTCCTGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR TCA 90 bp GATTTACCCTTAGGATTCCATACCAGTAAAACTGAACCGAGGAGTCTTAGGAAACTCCCTTTAGCAACCTaGGTAAGAGACTCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: DLPLGFHTSKTEPRSLRKLPLAT*VRDSLP
Trigger: TGGCAGAGAGTCTCTTACTCAGGTTGCTAAAGGGAG...TTTCCTAAGACTCCTCGGTTCAGTTTTACTGGTATGGAATCCTAAGGGTAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556794.5
CDS-3UTR GCA 90 bp GATTTACCCTTAGGATTCCATACCAGTAAAACTGAACCGAGGAGTCTTAGGAAACTTCTGGTGGCCTTCTaGTTGGAGATCTTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: DLPLGFHTSKTEPRSLRKLLVAF*LEILAS
Trigger: TGAAGCCAAGATCTCCAAGCAGAAGGCCACCAGAAG...TTTCCTAAGACTCCTCGGTTCAGTTTTACTGGTATGGAATCCTAAGGGTAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286544.5
CDS-3UTR GCA 90 bp TGTACAGGACAGTTCCCTTCCCCAACCCTCAACAAAGAATTAGGTGGCCCAAAAAATCTGAAGTTAGTGTaGAGAAACCCAAGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: CTGQFPSPTLNKELGGPKNLKLV*RNPSFS
Trigger: GGAAAAGCTTGGGTTTCTGCACACTAACTTCAGATT...TTTTGGGCCACCTAATTCTTTGTTGAGGGTTGGGGAAGGGAACTGTCCTGTACA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR GCA 90 bp CTACTAAACATTCTACAATGTACAGGACAGTTCCCTTCCCCAACCCTCAACAAAGGGATCCATGGCTTTTaGACGCAAGGTCACAGATTT +
Preference number: 4 (lower is better)
Translates to: LLNILQCTGQFPSPTLNKGIHGF*TQGHRF
Trigger: AAATCTGTGACCTTGCGTGCAAAAGCCATGGATCCC...TTTGTTGAGGGTTGGGGAAGGGAACTGTCCTGTACATTGTAGAATGTTTAGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR GCA 90 bp CAGGTAGTGGCCAGGGATGCTACTAAACATTCTACAATGTACAGGACAGTTCCCCTTGTTTGTATTCGCTaGTTCATTTCCTCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: QVVARDATKHSTMYRTVPLVCIR*FISSSS
Trigger: AGAACTGGAGGAAATGAAGCAGCGAATACAAACAAG...GGGAACTGTCCTGTACATTGTAGAATGTTTAGTAGCATCCCTGGCCACTACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR GCA 90 bp ACAGAGCTTCACCAGGAAGTTGAGTTTTCAAGATGCCTTGTTGCTTTGAAGAAGGAAGGCACAAGACTCTaGTTTTGCCACTCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: TELHQEVEFSRCLVALKKEGTRL*FCHSSS
Trigger: AGAGGAAGAGTGGCAAAAGCAGAGTCTTGTGCCTTC...CTTCTTCAAAGCAACAAGGCATCTTGAAAACTCAACTTCCTGGTGAAGCTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556794.5
CDS-3UTR CCA 90 bp ACTAGAAGTTGTAAGTTTTTCATCCCCCATGGGCTAGATCTGATATGCAGATGTATCTATCTCCTCCTCTaGGCTGAGGAACTCGTCAAG +
Preference number: 4 (lower is better)
Translates to: TRSCKFFIPHGLDLICRCIYLLL*AEELVK
Trigger: CTTGACGAGTTCCTCAGCCCAGAGGAGGAGATAGAT...ACATCTGCATATCAGATCTAGCCCATGGGGGATGAAAAACTTACAACTTCTAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CCA 90 bp CCTGCCTTGACTCAAACCCAAGTTAGCTGCTTAATATTTTTCAAAAGCAGTAATGAGGCCTGGGAATGTTaGAGGGAAGGTTGTTCAGGG +
Preference number: 4 (lower is better)
Translates to: PALTQTQVSCLIFFKSSNEAWEC*REGCSG
Trigger: CCCTGAACAACCTTCCCTCCAACATTCCCAGGCCTC...ATTACTGCTTTTGAAAAATATTAAGCAGCTAACTTGGGTTTGAGTCAAGGCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CCA 90 bp ACTAGAAGTTGTAAGTTTTTCATCCCCCATGGGCTAGATCTGATATGCAGATGTAAGAGCTCAGCTTCCTaGAGTTTATCCCCAAGGGCT +
Preference number: 4 (lower is better)
Translates to: TRSCKFFIPHGLDLICRCKSSAS*SLSPRA
Trigger: AGCCCTTGGGGATAAACTCCAGGAAGCTGAGCTCTT...ACATCTGCATATCAGATCTAGCCCATGGGGGATGAAAAACTTACAACTTCTAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CCA 90 bp GATTTACCCTTAGGATTCCATACCAGTAAAACTGAACCGAGGAGTCTTAGGAAAGGATTCACCCGAGGCTaGAATCTGAAGTTAGTGTGC +
Preference number: 4 (lower is better)
Translates to: DLPLGFHTSKTEPRSLRKGFTRG*NLKLVC
Trigger: GCACACTAACTTCAGATTCCAGCCTCGGGTGAATCC...TTTCCTAAGACTCCTCGGTTCAGTTTTACTGGTATGGAATCCTAAGGGTAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286544.5
CDS-3UTR CCA 90 bp CAACAAAGAATTAGGTGGCCCAAAATATTAATAGCACTGAGGATAAGAAATCCTCAGAGAACGACTCCTTaGCAGGGGTGTAGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: QQRIRWPKILIALRIRNPQRTTP*QGCSWW
Trigger: CCACCAGCTACACCCCTGCCAAGGAGTCGTTCTCTG...AGGATTTCTTATCCTCAGTGCTATTAATATTTTGGGCCACCTAATTCTTTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CCA 90 bp CACCCACTCCATGGACGCATTTATGTTTCTGCACTAGCCCCTTATAGGCATTTGTCTTGGCTAGATCCTTaGCAACTTGTTCAAAGAGAT +
Preference number: 4 (lower is better)
Translates to: HPLHGRIYVSALAPYRHLSWLDP*QLVQRD
Trigger: ATCTCTTTGAACAAGTTGCCAAGGATCTAGCCAAGA...CAAATGCCTATAAGGGGCTAGTGCAGAAACATAAATGCGTCCATGGAGTGGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CCA 90 bp CAGGTAGTGGCCAGGGATGCTACTAAACATTCTACAATGTACAGGACAGTTCCCTCTTGGCTAGATCCTTaGCAACTTGTTCAAAGAGAT +
Preference number: 4 (lower is better)
Translates to: QVVARDATKHSTMYRTVPSWLDP*QLVQRD
Trigger: ATCTCTTTGAACAAGTTGCCAAGGATCTAGCCAAGA...GGGAACTGTCCTGTACATTGTAGAATGTTTAGTAGCATCCCTGGCCACTACCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CCA 90 bp ACTAGAAGTTGTAAGTTTTTCATCCCCCATGGGCTAGATCTGATATGCAGATGTTTTTGCCGTGTTGGCTaGACTGGTCTCAAACTCCTG +
Preference number: 4 (lower is better)
Translates to: TRSCKFFIPHGLDLICRCFCRVG*TGLKLL
Trigger: CAGGAGTTTGAGACCAGTCCAGCCAACACGGCAAAA...ACATCTGCATATCAGATCTAGCCCATGGGGGATGAAAAACTTACAACTTCTAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR TCA 90 bp CAACAAAGAATTAGGTGGCCCAAAATATTAATAGCACTGAGGATAAGAAATCCTAGGGACAGTAATGGATaGTGCCCAGGAGCTGACGCT +
Preference number: 4 (lower is better)
Translates to: QQRIRWPKILIALRIRNPRDSNG*CPGADA
Trigger: AGCGTCAGCTCCTGGGCATCATCCATTACTGTCCCT...AGGATTTCTTATCCTCAGTGCTATTAATATTTTGGGCCACCTAATTCTTTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR TCA 90 bp GATTTACCCTTAGGATTCCATACCAGTAAAACTGAACCGAGGAGTCTTAGGAAATTTCAAGTGCACTTCTaGCTGCAGATTCCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: DLPLGFHTSKTEPRSLRKFQVHF*LQIPSS
Trigger: GGAAGAGGGAATCTGCAGTCAGAAGTGCACTTGAAA...TTTCCTAAGACTCCTCGGTTCAGTTTTACTGGTATGGAATCCTAAGGGTAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286544.5
CDS-3UTR TCA 90 bp GTGAATTTGATTATGTGTTGGCTGAAGTTCTTCATTCTGACTGTTGAGGGGAGGTGTATCTCCAGCCACTaGATACTCTCATCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: VNLIMCWLKFFILTVEGRCISSH*ILSSAL
Trigger: CAAAGCAGATGAGAGTATTCAGTGGCTGGAGATACA...CCTCCCCTCAACAGTCAGAATGAAGAACTTCAGCCAACACATAATCAAATTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556794.5
CDS-3UTR TCA 90 bp CAGACAAGGAATGAAGCAATGACTGTGGGCTGGGAAACTGTACCTACCTCTCTTATCTGGGAAAATCCTTaGTTTTGGTCTCTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: QTRNEAMTVGWETVPTSLIWENP*FWSLSL
Trigger: AAGAGAAAGAGACCAAAATCAAGGATTTTCCCAGAT...AAGAGAGGTAGGTACAGTTTCCCAGCCCACAGTCATTGCTTCATTCCTTGTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556794.5
CDS-3UTR TCA 90 bp GAAGAGCAACTCTATCTGATCTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCTTCACCAGGAAGTTaGGTTTTCAAGATGCCTTGT +
Preference number: 4 (lower is better)
Translates to: EEQLYLISKCVYWEQDALASPGS*VFKMPC
Trigger: ACAAGGCATCTTGAAAACTCAACTTCCTGGTGAAGC...TAAGGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGATAGAGTTGCTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556794.5
CDS-3UTR TCA 90 bp AAGAAGGGAGTGATGTCAATTCTCTTGTTACATTCTCCCTTTAGCAACCTGAGTCCAAGGAGATTTAACTaGAAGACGGACATGAGCGTG +
Preference number: 4 (lower is better)
Translates to: KKGVMSILLLHSPFSNLSPRRFN*KTDMSV
Trigger: CACGCTCATGTCCGTCTTTCAGTTAAATCTCCTTGG...ACTCAGGTTGCTAAAGGGAGAATGTAACAAGAGAATTGACATCACTCCCTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556794.5
CDS-3UTR GCA 90 bp ACTAGAAGTTGTAAGTTTTTCATCCCCCATGGGCTAGATCTGATATGCAGATGTAAGTGCACTTCTGACTaGAGATTCCCTCTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: TRSCKFFIPHGLDLICRCKCTSD*RFPLPG
Trigger: ACCAGGAAGAGGGAATCTGCAGTCAGAAGTGCACTT...ACATCTGCATATCAGATCTAGCCCATGGGGGATGAAAAACTTACAACTTCTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR GCA 90 bp ACTAGAAGTTGTAAGTTTTTCATCCCCCATGGGCTAGATCTGATATGCAGATGTGGGATCCATGGCTTTTaGACGCAAGGTCACAGATTT +
Preference number: 4 (lower is better)
Translates to: TRSCKFFIPHGLDLICRCGIHGF*TQGHRF
Trigger: AAATCTGTGACCTTGCGTGCAAAAGCCATGGATCCC...ACATCTGCATATCAGATCTAGCCCATGGGGGATGAAAAACTTACAACTTCTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR GCA 90 bp CCTGCCTTGACTCAAACCCAAGTTAGCTGCTTAATATTTTTCAAAAGCAGTAATGTAGAGGTGGAGTTTTaGCGTGTTGGCTGGACTGGT +
Preference number: 4 (lower is better)
Translates to: PALTQTQVSCLIFFKSSNVEVEF*RVGWTG
Trigger: ACCAGTCCAGCCAACACGGCAAAACTCCACCTCTAC...ATTACTGCTTTTGAAAAATATTAAGCAGCTAACTTGGGTTTGAGTCAAGGCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR GCA 90 bp GATTTACCCTTAGGATTCCATACCAGTAAAACTGAACCGAGGAGTCTTAGGAAAACAAGCATGAACCACTaGACCGAGCCAGAATATCCA +
Preference number: 4 (lower is better)
Translates to: DLPLGFHTSKTEPRSLRKTSMNH*TEPEYP
Trigger: TGGATATTCTGGCTCGGTGCAGTGGTTCATGCTTGT...TTTCCTAAGACTCCTCGGTTCAGTTTTACTGGTATGGAATCCTAAGGGTAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286544.5
CDS-3UTR GCA 90 bp GATTTACCCTTAGGATTCCATACCAGTAAAACTGAACCGAGGAGTCTTAGGAAACTTGGCCCCTCAAAGTaGTGGGATTACAAGCATGAA +
Preference number: 4 (lower is better)
Translates to: DLPLGFHTSKTEPRSLRKLGPSK*WDYKHE
Trigger: TTCATGCTTGTAATCCCAGCACTTTGAGGGGCCAAG...TTTCCTAAGACTCCTCGGTTCAGTTTTACTGGTATGGAATCCTAAGGGTAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286544.5
CDS-3UTR GCA 90 bp CAACAAAGAATTAGGTGGCCCAAAATATTAATAGCACTGAGGATAAGAAATCCTTTCAAGCGATCCTCCTaGCTTGGCCCCTCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: QQRIRWPKILIALRIRNPFKRSS*LGPSKC
Trigger: GCACTTTGAGGGGCCAAGGCAGGAGGATCGCTTGAA...AGGATTTCTTATCCTCAGTGCTATTAATATTTTGGGCCACCTAATTCTTTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286544.5
CDS-3UTR CCA 90 bp CAACAAAGAATTAGGTGGCCCAAAATATTAATAGCACTGAGGATAAGAAATCCTCACGGTCATTTCAGCTaGACAGAGGCAGCAGCGACA +
Preference number: 4 (lower is better)
Translates to: QQRIRWPKILIALRIRNPHGHFS*TEAAAT
Trigger: TGTCGCTGCTGCCTCTGTCCAGCTGAAATGACCGTG...AGGATTTCTTATCCTCAGTGCTATTAATATTTTGGGCCACCTAATTCTTTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CCA 90 bp CAACAAAGAATTAGGTGGCCCAAAATATTAATAGCACTGAGGATAAGAAATCCTGAGGCCTGGGAATGTTaGAGGGAAGGTTGTTCAGGG +
Preference number: 4 (lower is better)
Translates to: QQRIRWPKILIALRIRNPEAWEC*REGCSG
Trigger: CCCTGAACAACCTTCCCTCCAACATTCCCAGGCCTC...AGGATTTCTTATCCTCAGTGCTATTAATATTTTGGGCCACCTAATTCTTTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CCA 90 bp CCTGCCTTGACTCAAACCCAAGTTAGCTGCTTAATATTTTTCAAAAGCAGTAATTCTTGGCTTCAGCTGTaGCTGCCAAGTCTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: PALTQTQVSCLIFFKSSNSWLQL*LPSLSV
Trigger: GACAGAGAGACTTGGCAGCCACAGCTGAAGCCAAGA...ATTACTGCTTTTGAAAAATATTAAGCAGCTAACTTGGGTTTGAGTCAAGGCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CCA 90 bp CCTGCCTTGACTCAAACCCAAGTTAGCTGCTTAATATTTTTCAAAAGCAGTAATTTTATCCCCAAGGGCTaGCTCCAGAATGGACTTGGG +
Preference number: 4 (lower is better)
Translates to: PALTQTQVSCLIFFKSSNFIPKG*LQNGLG
Trigger: CCCAAGTCCATTCTGGAGCCAGCCCTTGGGGATAAA...ATTACTGCTTTTGAAAAATATTAAGCAGCTAACTTGGGTTTGAGTCAAGGCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CCA 90 bp TGTACAGGACAGTTCCCTTCCCCAACCCTCAACAAAGAATTAGGTGGCCCAAAAAGTTTTGTAGTTTCTTaGAACCTGGGAAAATCCTTG +
Preference number: 4 (lower is better)
Translates to: CTGQFPSPTLNKELGGPKSFVVS*NLGKSL
Trigger: CAAGGATTTTCCCAGGTTCCAAGAAACTACAAAACT...TTTTGGGCCACCTAATTCTTTGTTGAGGGTTGGGGAAGGGAACTGTCCTGTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CCA 90 bp CAGGTAGTGGCCAGGGATGCTACTAAACATTCTACAATGTACAGGACAGTTCCCAGTTTTGTAGTTTCTTaGAACCTGGGAAAATCCTTG +
Preference number: 4 (lower is better)
Translates to: QVVARDATKHSTMYRTVPSFVVS*NLGKSL
Trigger: CAAGGATTTTCCCAGGTTCCAAGAAACTACAAAACT...GGGAACTGTCCTGTACATTGTAGAATGTTTAGTAGCATCCCTGGCCACTACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CCA 90 bp CAACAAAGAATTAGGTGGCCCAAAATATTAATAGCACTGAGGATAAGAAATCCTGTGAGCCACTGCGCCTaGCCTGTTAATCTGCTACTC +
Preference number: 4 (lower is better)
Translates to: QQRIRWPKILIALRIRNPVSHCA*PVNLLL
Trigger: GAGTAGCAGATTAACAGGCCAGGCGCAGTGGCTCAC...AGGATTTCTTATCCTCAGTGCTATTAATATTTTGGGCCACCTAATTCTTTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CCA 90 bp TGCGCCTGGCCTGTTAATCTGCTACTCTTCATTTGTCCATCCTCTAACAGTAGCGGGATATGCAATATCTaGAGACATTTTTGGTTGTCA +
Preference number: 4 (lower is better)
Translates to: CAWPVNLLLFICPSSNSSGICNI*RHFWLS
Trigger: TGACAACCAAAAATGTCTCCAGATATTGCATATCCC...GCTACTGTTAGAGGATGGACAAATGAAGAGTAGCAGATTAACAGGCCAGGCGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR TCA 90 bp ACTAGAAGTTGTAAGTTTTTCATCCCCCATGGGCTAGATCTGATATGCAGATGTAAGTTTTCCCTGCCTTaGCTCAAACCCAAGTTAGCT +
Preference number: 4 (lower is better)
Translates to: TRSCKFFIPHGLDLICRCKFSLP*LKPKLA
Trigger: AGCTAACTTGGGTTTGAGTCAAGGCAGGGAAAACTT...ACATCTGCATATCAGATCTAGCCCATGGGGGATGAAAAACTTACAACTTCTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR GCA 90 bp ACTAGAAGTTGTAAGTTTTTCATCCCCCATGGGCTAGATCTGATATGCAGATGTCACCATCTCCCTTTCTaGTTCAGTTCCTGTAAGTTC +
Preference number: 4 (lower is better)
Translates to: TRSCKFFIPHGLDLICRCHHLPF*FSSCKF
Trigger: GAACTTACAGGAACTGAAGCAGAAAGGGAGATGGTG...ACATCTGCATATCAGATCTAGCCCATGGGGGATGAAAAACTTACAACTTCTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR GCA 90 bp ACTAGAAGTTGTAAGTTTTTCATCCCCCATGGGCTAGATCTGATATGCAGATGTTTCTCTTCTTTTGGCTaGTCTTCTCTGGAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: TRSCKFFIPHGLDLICRCFSSFG*SSLEGL
Trigger: AAGGCCTTCCAGAGAAGAGCAGCCAAAAGAAGAGAA...ACATCTGCATATCAGATCTAGCCCATGGGGGATGAAAAACTTACAACTTCTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR GCA 90 bp CAACAAAGAATTAGGTGGCCCAAAATATTAATAGCACTGAGGATAAGAAATCCTGCAAGAAGGGCTTGTTaGGAGTGGCCTCTTGGGTTT +
Preference number: 4 (lower is better)
Translates to: QQRIRWPKILIALRIRNPARRAC*EWPLGF
Trigger: AAACCCAAGAGGCCACTCGCAACAAGCCCTTCTTGC...AGGATTTCTTATCCTCAGTGCTATTAATATTTTGGGCCACCTAATTCTTTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR GCA 90 bp CAACAAAGAATTAGGTGGCCCAAAATATTAATAGCACTGAGGATAAGAAATCCTGTGGCATCTGTGATGTaGACAGGGAGAGTGTTGGCA +
Preference number: 4 (lower is better)
Translates to: QQRIRWPKILIALRIRNPVASVM*TGRVLA
Trigger: TGCCAACACTCTCCCTGTGCACATCACAGATGCCAC...AGGATTTCTTATCCTCAGTGCTATTAATATTTTGGGCCACCTAATTCTTTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR GCA 90 bp AAAGTGAATTTGATTATGTGTTGGCTGAAGTTCTTCATTCTGACTGTTGAGGGGGGGATCCATGGCTTTTaGACGCAAGGTCACAGATTT +
Preference number: 4 (lower is better)
Translates to: KVNLIMCWLKFFILTVEGGIHGF*TQGHRF
Trigger: AAATCTGTGACCTTGCGTGCAAAAGCCATGGATCCC...CCCCTCAACAGTCAGAATGAAGAACTTCAGCCAACACATAATCAAATTCACTTT
42% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000556794.5
CDS-3UTR GCA 90 bp GATTTACCCTTAGGATTCCATACCAGTAAAACTGAACCGAGGAGTCTTAGGAAAGCTCATTACAACCTCTaGCTCTTGGGTTCAAGTGAT +
Preference number: 4 (lower is better)
Translates to: DLPLGFHTSKTEPRSLRKAHYNL*LLGSSD
Trigger: ATCACTTGAACCCAAGAGGCAGAGGTTGTAATGAGC...TTTCCTAAGACTCCTCGGTTCAGTTTTACTGGTATGGAATCCTAAGGGTAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286544.5
CDS-3UTR GCA 90 bp TGTACAGGACAGTTCCCTTCCCCAACCCTCAACAAAGAATTAGGTGGCCCAAAACTTGTATTCTTAGAATaGCAGTTTTTGCTTCATGCA +
Preference number: 4 (lower is better)
Translates to: CTGQFPSPTLNKELGGPKLVFLE*QFLLHA
Trigger: TGCATGAAGCAAAAACTGGCATTCTAAGAATACAAG...TTTTGGGCCACCTAATTCTTTGTTGAGGGTTGGGGAAGGGAACTGTCCTGTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR GCA 90 bp GAGCAACTCTATCTGATCTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCTATCTGATCTCAAAATaGGTATACTGGGAACAGGAT +
Preference number: 4 (lower is better)
Translates to: EQLYLISKCVYWEQDALAYLISK*VYWEQD
Trigger: ATCCTGTTCCCAGTATACGCATTTTGAGATCAGATA...GGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGATAGAGTTGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556794.5
CDS-3UTR CCA 90 bp CAACAAAGAATTAGGTGGCCCAAAATATTAATAGCACTGAGGATAAGAAATCCTCCTCCAGTACTTTCCTaGGGCTTGCAGGCTGTTCTA +
Preference number: 4 (lower is better)
Translates to: QQRIRWPKILIALRIRNPPPVLS*GLQAVL
Trigger: TAGAACAGCCTGCAAGCCCCAGGAAAGTACTGGAGG...AGGATTTCTTATCCTCAGTGCTATTAATATTTTGGGCCACCTAATTCTTTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CCA 90 bp CCTGCCTTGACTCAAACCCAAGTTAGCTGCTTAATATTTTTCAAAAGCAGTAATTTTTGCCGTGTTGGCTaGACTGGTCTCAAACTCCTG +
Preference number: 4 (lower is better)
Translates to: PALTQTQVSCLIFFKSSNFCRVG*TGLKLL
Trigger: CAGGAGTTTGAGACCAGTCCAGCCAACACGGCAAAA...ATTACTGCTTTTGAAAAATATTAAGCAGCTAACTTGGGTTTGAGTCAAGGCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CCA 90 bp CAACAAAGAATTAGGTGGCCCAAAATATTAATAGCACTGAGGATAAGAAATCCTTTTGGTTGTCACAGCTaGGGAGAGGGGTACTACTGG +
Preference number: 4 (lower is better)
Translates to: QQRIRWPKILIALRIRNPFGCHS*GEGYYW
Trigger: CCAGTAGTACCCCTCTCCCCAGCTGTGACAACCAAA...AGGATTTCTTATCCTCAGTGCTATTAATATTTTGGGCCACCTAATTCTTTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CCA 90 bp ACTAGAAGTTGTAAGTTTTTCATCCCCCATGGGCTAGATCTGATATGCAGATGTATCTGGAGACATTTTTaGTTGTCACAGCTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: TRSCKFFIPHGLDLICRCIWRHF*LSQLGR
Trigger: TCTCCCCAGCTGTGACAACCAAAAATGTCTCCAGAT...ACATCTGCATATCAGATCTAGCCCATGGGGGATGAAAAACTTACAACTTCTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR GCA 90 bp CCTGCCTTGACTCAAACCCAAGTTAGCTGCTTAATATTTTTCAAAAGCAGTAATGATCCTTCTAAACCCTaGTCTGGATCTCTGATGCTG +
Preference number: 4 (lower is better)
Translates to: PALTQTQVSCLIFFKSSNDPSKP*SGSLML
Trigger: CAGCATCAGAGATCCAGAGCAGGGTTTAGAAGGATC...ATTACTGCTTTTGAAAAATATTAAGCAGCTAACTTGGGTTTGAGTCAAGGCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CCA 90 bp CAACAAAGAATTAGGTGGCCCAAAATATTAATAGCACTGAGGATAAGAAATCCTGGATTCACCCGAGGCTaGAATCTGAAGTTAGTGTGC +
Preference number: 4 (lower is better)
Translates to: QQRIRWPKILIALRIRNPGFTRG*NLKLVC
Trigger: GCACACTAACTTCAGATTCCAGCCTCGGGTGAATCC...AGGATTTCTTATCCTCAGTGCTATTAATATTTTGGGCCACCTAATTCTTTGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CCA 90 bp CCTGCCTTGACTCAAACCCAAGTTAGCTGCTTAATATTTTTCAAAAGCAGTAATTTGCGAGTGGCCTCTTaGGTTTCTCTTCTTTTGGCT +
Preference number: 4 (lower is better)
Translates to: PALTQTQVSCLIFFKSSNLRVAS*VSLLLA
Trigger: AGCCAAAAGAAGAGAAACCCAAGAGGCCACTCGCAA...ATTACTGCTTTTGAAAAATATTAAGCAGCTAACTTGGGTTTGAGTCAAGGCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CCA 90 bp GAGGTACTATCTTGTCCTATACACTTCTACTTGGTCACTTTGCTTTCTTCGTTATCAAAATGCGTATACTaGGAACAGGATGCCTTAGCC +
Preference number: 4 (lower is better)
Translates to: EVLSCPIHFYLVTLLSSLSKCVY*EQDALA
Trigger: GGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGA...TAACGAAGAAAGCAAAGTGACCAAGTAGAAGTGTATAGGACAAGATAGTACCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556794.5
CDS-3UTR TCA 90 bp GATTTACCCTTAGGATTCCATACCAGTAAAACTGAACCGAGGAGTCTTAGGAAAGTAAATGCTCCCAGTTaGGTCAGAAGTAGAATCTAT +
Preference number: 4 (lower is better)
Translates to: DLPLGFHTSKTEPRSLRKVNAPS*VRSRIY
Trigger: ATAGATTCTACTTCTGACTCAACTGGGAGCATTTAC...TTTCCTAAGACTCCTCGGTTCAGTTTTACTGGTATGGAATCCTAAGGGTAAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286544.5
CDS-3UTR TCA 90 bp ACTAGAAGTTGTAAGTTTTTCATCCCCCATGGGCTAGATCTGATATGCAGATGTTATTCCAGCAGGATTTaGTACTTTCCAGTGTCTACT +
Preference number: 4 (lower is better)
Translates to: TRSCKFFIPHGLDLICRCYSSRI*YFPVST
Trigger: AGTAGACACTGGAAAGTATCAAATCCTGCTGGAATA...ACATCTGCATATCAGATCTAGCCCATGGGGGATGAAAAACTTACAACTTCTAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR TCA 90 bp ACTAGAAGTTGTAAGTTTTTCATCCCCCATGGGCTAGATCTGATATGCAGATGTATCATCATTATGATTTaGGATGGGGTCTTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: TRSCKFFIPHGLDLICRCIIIMI*DGVLLC
Trigger: ACAGAGCAAGACCCCATCTCAAATCATAATGATGAT...ACATCTGCATATCAGATCTAGCCCATGGGGGATGAAAAACTTACAACTTCTAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000286544.5
CDS-3UTR TCA 90 bp AAAGTGAATTTGATTATGTGTTGGCTGAAGTTCTTCATTCTGACTGTTGAGGGGACCAGAATGAATCTTTaGAGGCACAAGACTCTGCTT +
Preference number: 4 (lower is better)
Translates to: KVNLIMCWLKFFILTVEGTRMNL*RHKTLL
Trigger: AAGCAGAGTCTTGTGCCTTCAAAGATTCATTCTGGT...CCCCTCAACAGTCAGAATGAAGAACTTCAGCCAACACATAATCAAATTCACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556794.5
CDS-3UTR TCA 90 bp GATTTACCCTTAGGATTCCATACCAGTAAAACTGAACCGAGGAGTCTTAGGAAAACAACAGAACCAGAATaGATCTTTGAAGGCACAAGA +
Preference number: 4 (lower is better)
Translates to: DLPLGFHTSKTEPRSLRKTTEPE*IFEGTR
Trigger: TCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGT...TTTCCTAAGACTCCTCGGTTCAGTTTTACTGGTATGGAATCCTAAGGGTAAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556794.5
CDS-3UTR TCA 90 bp ACAGAGCTTCACCAGGAAGTTGAGTTTTCAAGATGCCTTGTTGCTTTGAAGAAGAAGAGCAACTCTATCTaGTCTCAAAATGCGTATACT +
Preference number: 4 (lower is better)
Translates to: TELHQEVEFSRCLVALKKKSNSI*SQNAYT
Trigger: AGTATACGCATTTTGAGATCAGATAGAGTTGCTCTT...CTTCTTCAAAGCAACAAGGCATCTTGAAAACTCAACTTCCTGGTGAAGCTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556794.5
CDS-3UTR GCA 90 bp CCTGCCTTGACTCAAACCCAAGTTAGCTGCTTAATATTTTTCAAAAGCAGTAATTTCTCTTCTTTTGGCTaGTCTTCTCTGGAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: PALTQTQVSCLIFFKSSNFSSFG*SSLEGL
Trigger: AAGGCCTTCCAGAGAAGAGCAGCCAAAAGAAGAGAA...ATTACTGCTTTTGAAAAATATTAAGCAGCTAACTTGGGTTTGAGTCAAGGCAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR GCA 90 bp GTGAATTTGATTATGTGTTGGCTGAAGTTCTTCATTCTGACTGTTGAGGGGAGGCACAGATTTGGACATTaGTTGAGACTTCTTTTTGTG +
Preference number: 4 (lower is better)
Translates to: VNLIMCWLKFFILTVEGRHRFGH*LRLLFV
Trigger: CACAAAAAGAAGTCTCAAGCAATGTCCAAATCTGTG...CCTCCCCTCAACAGTCAGAATGAAGAACTTCAGCCAACACATAATCAAATTCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556794.5
CDS-3UTR GCA 90 bp AAGAAGGGAGTGATGTCAATTCTCTTGTTACATTCTCCCTTTAGCAACCTGAGTCTTGTTTGTATTCGCTaGTTCATTTCCTCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: KKGVMSILLLHSPFSNLSLVCIR*FISSSS
Trigger: AGAACTGGAGGAAATGAAGCAGCGAATACAAACAAG...ACTCAGGTTGCTAAAGGGAGAATGTAACAAGAGAATTGACATCACTCCCTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556794.5
CDS-3UTR GCA 90 bp CCTGCCTTGACTCAAACCCAAGTTAGCTGCTTAATATTTTTCAAAAGCAGTAATAACCCAAGTTTTCCCTaGCTTGACTCAAACCCAAGT +
Preference number: 4 (lower is better)
Translates to: PALTQTQVSCLIFFKSSNNPSFP*LDSNPS
Trigger: ACTTGGGTTTGAGTCAAGGCAGGGAAAACTTGGGTT...ATTACTGCTTTTGAAAAATATTAAGCAGCTAACTTGGGTTTGAGTCAAGGCAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CCA 90 bp CCTGCCTTGACTCAAACCCAAGTTAGCTGCTTAATATTTTTCAAAAGCAGTAATTCCAGGGCTCTCATTTaGATGCGAATTTTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: PALTQTQVSCLIFFKSSNSRALI*MRIFLK
Trigger: CTTCAGGAAAATTCGCATCCAAATGAGAGCCCTGGA...ATTACTGCTTTTGAAAAATATTAAGCAGCTAACTTGGGTTTGAGTCAAGGCAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CCA 90 bp AAGAAGGGAGTGATGTCAATTCTCTTGTTACATTCTCCCTTTAGCAACCTGAGTTCTTGGCTAGATCCTTaGCAACTTGTTCAAAGAGAT +
Preference number: 4 (lower is better)
Translates to: KKGVMSILLLHSPFSNLSSWLDP*QLVQRD
Trigger: ATCTCTTTGAACAAGTTGCCAAGGATCTAGCCAAGA...ACTCAGGTTGCTAAAGGGAGAATGTAACAAGAGAATTGACATCACTCCCTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556794.5
CDS-3UTR CCA 90 bp GTGAATTTGATTATGTGTTGGCTGAAGTTCTTCATTCTGACTGTTGAGGGGAGGCTATACACTTCTACTTaGTCACTTTGCTTTCTTCGT +
Preference number: 4 (lower is better)
Translates to: VNLIMCWLKFFILTVEGRLYTST*SLCFLR
Trigger: ACGAAGAAAGCAAAGTGACCAAGTAGAAGTGTATAG...CCTCCCCTCAACAGTCAGAATGAAGAACTTCAGCCAACACATAATCAAATTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556794.5
3UTR CAA 72 bp CACCAGGAAGTTGAGTTTTCAAGATGCCTTGTTGCTTaGAAGAAGGGAGTGATGTCAATTCTCTTGTTACAT +
Preference number: 4 (lower is better)
Translates to: HQEVEFSRCLVA*KKGVMSILLLH
Trigger: ATGTAACAAGAGAATTGACATCACTCCCTTCTTCAAAGCAACAAGGCATCTTGAAAACTCAACTTCCTGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556794.5
CDS-3UTR TCA 90 bp CCTGCCTTGACTCAAACCCAAGTTAGCTGCTTAATATTTTTCAAAAGCAGTAATCACTCATCATCATTATaGTTTGAGATGGGGTCTTGC +
Preference number: 4 (lower is better)
Translates to: PALTQTQVSCLIFFKSSNHSSSL*FEMGSC
Trigger: GCAAGACCCCATCTCAAATCATAATGATGATGAGTG...ATTACTGCTTTTGAAAAATATTAAGCAGCTAACTTGGGTTTGAGTCAAGGCAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000286544.5
CDS-3UTR TCA 90 bp CCTGCCTTGACTCAAACCCAAGTTAGCTGCTTAATATTTTTCAAAAGCAGTAATTGTCTCCACAGCTACTaGGAAAATATCCACTCATCA +
Preference number: 4 (lower is better)
Translates to: PALTQTQVSCLIFFKSSNCLHSY*ENIHSS
Trigger: TGATGAGTGGATATTTTCTCAGTAGCTGTGGAGACA...ATTACTGCTTTTGAAAAATATTAAGCAGCTAACTTGGGTTTGAGTCAAGGCAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000286544.5
CDS-3UTR GCA 90 bp ACTAGAAGTTGTAAGTTTTTCATCCCCCATGGGCTAGATCTGATATGCAGATGTCACAGATTTGGACATTaGTTGAGACTTCTTTTTGTG +
Preference number: 4 (lower is better)
Translates to: TRSCKFFIPHGLDLICRCHRFGH*LRLLFV
Trigger: CACAAAAAGAAGTCTCAAGCAATGTCCAAATCTGTG...ACATCTGCATATCAGATCTAGCCCATGGGGGATGAAAAACTTACAACTTCTAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR GCA 90 bp CTACTAAACATTCTACAATGTACAGGACAGTTCCCTTCCCCAACCCTCAACAAAGGGCTAGATCTGATATaGAGATGTATTTTATTTTGC +
Preference number: 4 (lower is better)
Translates to: LLNILQCTGQFPSPTLNKGLDLI*RCILFC
Trigger: GCAAAATAAAATACATCTGCATATCAGATCTAGCCC...TTTGTTGAGGGTTGGGGAAGGGAACTGTCCTGTACATTGTAGAATGTTTAGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR GCA 90 bp CTACTAAACATTCTACAATGTACAGGACAGTTCCCTTCCCCAACCCTCAACAAACTTGTATTCTTAGAATaGCAGTTTTTGCTTCATGCA +
Preference number: 4 (lower is better)
Translates to: LLNILQCTGQFPSPTLNKLVFLE*QFLLHA
Trigger: TGCATGAAGCAAAAACTGGCATTCTAAGAATACAAG...TTTGTTGAGGGTTGGGGAAGGGAACTGTCCTGTACATTGTAGAATGTTTAGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CCA 90 bp GATTTACCCTTAGGATTCCATACCAGTAAAACTGAACCGAGGAGTCTTAGGAAAGCCCAGTCAGTTCTTTaGCTCTTGTTTTATACAAAA +
Preference number: 4 (lower is better)
Translates to: DLPLGFHTSKTEPRSLRKAQSVL*LLFYTK
Trigger: TTTTGTATAAAACAAGAGCCAAAGAACTGACTGGGC...TTTCCTAAGACTCCTCGGTTCAGTTTTACTGGTATGGAATCCTAAGGGTAAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556794.5
3UTR CAA 72 bp CCCACTGCAAATTTCTGGGATAGACCAAAAGTGAATTaGATTATGTGTTGGCTGAAGTTCTTCATTCTGACT +
Preference number: 4 (lower is better)
Translates to: PTANFWDRPKVN*IMCWLKFFILT
Trigger: AGTCAGAATGAAGAACTTCAGCCAACACATAATCAAATTCACTTTTGGTCTATCCCAGAAATTTGCAGTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556794.5
CDS-3UTR TCA 90 bp CCTGCCTTGACTCAAACCCAAGTTAGCTGCTTAATATTTTTCAAAAGCAGTAATGTAAATGCTCCCAGTTaGGTCAGAAGTAGAATCTAT +
Preference number: 4 (lower is better)
Translates to: PALTQTQVSCLIFFKSSNVNAPS*VRSRIY
Trigger: ATAGATTCTACTTCTGACTCAACTGGGAGCATTTAC...ATTACTGCTTTTGAAAAATATTAAGCAGCTAACTTGGGTTTGAGTCAAGGCAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
3UTR CAA 72 bp GTACTATCTTGTCCTATACACTTCTACTTGGTCACTTaGCTTTCTTCGTTAATGGAACATACAGTAGCATGT +
Preference number: 4 (lower is better)
Translates to: VLSCPIHFYLVT*LSSLMEHTVAC
Trigger: ACATGCTACTGTATGTTCCATTAACGAAGAAAGCAAAGTGACCAAGTAGAAGTGTATAGGACAAGATAGTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556794.5
CDS-3UTR GCA 90 bp CAACAAAGAATTAGGTGGCCCAAAATATTAATAGCACTGAGGATAAGAAATCCTAATCTGAAGTTAGTGTaGAGAAACCCAAGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: QQRIRWPKILIALRIRNPNLKLV*RNPSFS
Trigger: GGAAAAGCTTGGGTTTCTGCACACTAACTTCAGATT...AGGATTTCTTATCCTCAGTGCTATTAATATTTTGGGCCACCTAATTCTTTGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR GCA 90 bp CAACAAAGAATTAGGTGGCCCAAAATATTAATAGCACTGAGGATAAGAAATCCTCTTGTTTGTATTCGCTaGTTCATTTCCTCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: QQRIRWPKILIALRIRNPLVCIR*FISSSS
Trigger: AGAACTGGAGGAAATGAAGCAGCGAATACAAACAAG...AGGATTTCTTATCCTCAGTGCTATTAATATTTTGGGCCACCTAATTCTTTGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CCA 90 bp CCTGCCTTGACTCAAACCCAAGTTAGCTGCTTAATATTTTTCAAAAGCAGTAATGGGATATGCAATATCTaGAGACATTTTTGGTTGTCA +
Preference number: 4 (lower is better)
Translates to: PALTQTQVSCLIFFKSSNGICNI*RHFWLS
Trigger: TGACAACCAAAAATGTCTCCAGATATTGCATATCCC...ATTACTGCTTTTGAAAAATATTAAGCAGCTAACTTGGGTTTGAGTCAAGGCAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR GCA 90 bp CAACAAAGAATTAGGTGGCCCAAAATATTAATAGCACTGAGGATAAGAAATCCTCACAGATTTGGACATTaGTTGAGACTTCTTTTTGTG +
Preference number: 4 (lower is better)
Translates to: QQRIRWPKILIALRIRNPHRFGH*LRLLFV
Trigger: CACAAAAAGAAGTCTCAAGCAATGTCCAAATCTGTG...AGGATTTCTTATCCTCAGTGCTATTAATATTTTGGGCCACCTAATTCTTTGTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR GCA 90 bp CCTGCCTTGACTCAAACCCAAGTTAGCTGCTTAATATTTTTCAAAAGCAGTAATGGGCTAGATCTGATATaGAGATGTATTTTATTTTGC +
Preference number: 4 (lower is better)
Translates to: PALTQTQVSCLIFFKSSNGLDLI*RCILFC
Trigger: GCAAAATAAAATACATCTGCATATCAGATCTAGCCC...ATTACTGCTTTTGAAAAATATTAAGCAGCTAACTTGGGTTTGAGTCAAGGCAGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
3UTR CAA 72 bp TCATGGCAATTACTTGTATTCTTAGAATGCCAGTTTTaGCTTCATGCAGCCATTTATATTAGAGCAGTGGTT +
Preference number: 4 (lower is better)
Translates to: SWQLLVFLECQF*LHAAIYIRAVV
Trigger: AACCACTGCTCTAATATAAATGGCTGCATGAAGCAAAAACTGGCATTCTAAGAATACAAGTAATTGCCATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS GCA 90 bp GCGACGGCGCAGGTCTGCACCATGGCGGCCCGGCTTGTCAGCCGATaGGGGGCTGTGCGTGCAGCTCCCCACAGCGGCCCGCTGGTGTCC +
Preference number: 5 (lower is better)
Translates to: ATAQVCTMAARLVSR*GAVRAAPHSGPLVS
Trigger: GGACACCAGCGGGCCGCTGTGGGGAGCTGCACGCACAGCCCCGCATCGGCTGACAAGCCGGGCCGCCATGGTGCAGACCTGCGCCGTCGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651776.1
CDS GCA 90 bp AGGTCTGCACCATGGCGGCCCGGCTTGTCAGCCGATGCGGGGCTGTaGGTGCAGCTCCCCACAGCGGCCCGCTGGTGTCCTGGCGCAGGT +
Preference number: 5 (lower is better)
Translates to: RSAPWRPGLSADAGL*VQLPTAARWCPGAG
Trigger: ACCTGCGCCAGGACACCAGCGGGCCGCTGTGGGGAGCTGCACGCACAGCCCCGCATCGGCTGACAAGCCGGGCCGCCATGGTGCAGACCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651776.1
CDS TCA 90 bp ACCCTGCCTCTGGGCCCGCTGCCTCTCCTGCTCAAAGGAGGCAGGTaGGCCCAGCCACTCGGCCTTCTTCCGGGCCTCGCGCAGCGTCAT +
Preference number: 5 (lower is better)
Translates to: TLPLGPLPLLLKGGR*AQPLGLLPGLAQRH
Trigger: ATGACGCTGCGCGAGGCCCGGAAGAAGGCCGAGTGGCTGGGCTCACCTGCCTCCTTTGAGCAGGAGAGGCAGCGGGCCCAGAGGCAGGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS GCA 90 bp TACGTAGGTGGGCCTGCGGGAGTTCTGAGTGCGACGGCGCAGGTCTaGACCATGGCGGCCCGGCTTGTCAGCCGATGCGGGGCTGTGCGT +
Preference number: 5 (lower is better)
Translates to: YVGGPAGVLSATAQV*TMAARLVSRCGAVR
Trigger: ACGCACAGCCCCGCATCGGCTGACAAGCCGGGCCGCCATGGTGCAGACCTGCGCCGTCGCACTCAGAACTCCCGCAGGCCCACCTACGTA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651776.1
CDS GCA 90 bp TCTGCTCCGGACGCACTACGTAGGTGGGCCTGCGGGAGTTCTGAGTaGGACGGCGCAGGTCTGCACCATGGCGGCCCGGCTTGTCAGCCG +
Preference number: 5 (lower is better)
Translates to: SAPDALRRWACGSSE*DGAGLHHGGPACQP
Trigger: CGGCTGACAAGCCGGGCCGCCATGGTGCAGACCTGCGCCGTCGCACTCAGAACTCCCGCAGGCCCACCTACGTAGTGCGTCCGGAGCAGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651776.1
CDS GCA 90 bp CACTCGGCCTCTTCCTCACCCTGCCTCTGGGCCCGCTGCCTCTCCTaGTCAAAGGAGGCAGGTGAGCCCAGCCACTCGGCCTTCTTCCGG +
Preference number: 5 (lower is better)
Translates to: HSASSSPCLWARCLS*SKEAGEPSHSAFFR
Trigger: CCGGAAGAAGGCCGAGTGGCTGGGCTCACCTGCCTCCTTTGAGCAGGAGAGGCAGCGGGCCCAGAGGCAGGGTGAGGAAGAGGCCGAGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS GCA 90 bp GGCTGTGCCCGGAACTGCCTGTGGCACTCGGCCTCTTCCTCACCCTaGCTCTGGGCCCGCTGCCTCTCCTGCTCAAAGGAGGCAGGTGAG +
Preference number: 5 (lower is better)
Translates to: GCARNCLWHSASSSP*LWARCLSCSKEAGE
Trigger: CTCACCTGCCTCCTTTGAGCAGGAGAGGCAGCGGGCCCAGAGGCAGGGTGAGGAAGAGGCCGAGTGCCACAGGCAGTTCCGGGCACAGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS GCA 90 bp ACGGGATTGGAGTGCTCTGCTCCGGACGCACTACGTAGGTGGGCCTaGGGGAGTTCTGAGTGCGACGGCGCAGGTCTGCACCATGGCGGC +
Preference number: 5 (lower is better)
Translates to: TGLECSAPDALRRWA*GSSECDGAGLHHGG
Trigger: GCCGCCATGGTGCAGACCTGCGCCGTCGCACTCAGAACTCCCGCAGGCCCACCTACGTAGTGCGTCCGGAGCAGAGCACTCCAATCCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651776.1
CDS TCA 90 bp GGGGAATCCTGCCTCCTTCCGGTGGTGGCAGCATCACAGGGCCGCTaGGGGTGGCGCAGGTTGGCGGTCCTCAGCAAGAAGGGCTTGTTG +
Preference number: 5 (lower is better)
Translates to: GESCLLPVVAASQGR*GWRRLAVLSKKGLL
Trigger: CAACAAGCCCTTCTTGCTGAGGACCGCCAACCTGCGCCACCCTCAGCGGCCCTGTGATGCTGCCACCACCGGAAGGAGGCAGGATTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS CCA 90 bp GAGGCCGGGAGCCTGAGGGTGGCTGGGTCTGAGGCCTGGGAATGTTaGAGGGAAGGTTGTTCAGGGAGCTGCAGCGCCTTGTGGAGCCAC +
Preference number: 5 (lower is better)
Translates to: EAGSLRVAGSEAWEC*REGCSGSCSALWSH
Trigger: GTGGCTCCACAAGGCGCTGCAGCTCCCTGAACAACCTTCCCTCCAACATTCCCAGGCCTCAGACCCAGCCACCCTCAGGCTCCCGGCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS CCA 90 bp TTCCGGTGGTGGCAGCATCACAGGGCCGCTGAGGGTGGCGCAGGTTaGCGGTCCTCAGCAAGAAGGGCTTGTTGCGAGTGGCCTCTTGGG +
Preference number: 5 (lower is better)
Translates to: FRWWQHHRAAEGGAG*RSSARRACCEWPLG
Trigger: CCCAAGAGGCCACTCGCAACAAGCCCTTCTTGCTGAGGACCGCCAACCTGCGCCACCCTCAGCGGCCCTGTGATGCTGCCACCACCGGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS CCA 90 bp AGCGGGACGGGATTGGAGTGCTCTGCTCCGGACGCACTACGTAGGTaGGCCTGCGGGAGTTCTGAGTGCGACGGCGCAGGTCTGCACCAT +
Preference number: 5 (lower is better)
Translates to: SGTGLECSAPDALRR*ACGSSECDGAGLHH
Trigger: ATGGTGCAGACCTGCGCCGTCGCACTCAGAACTCCCGCAGGCCCACCTACGTAGTGCGTCCGGAGCAGAGCACTCCAATCCCGTCCCGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651776.1
CDS CCA 90 bp CTATGCGGGGCCAGGGTCCACCCCTTTCTAGCTTTGGCGTCTGGTTaGCTTCCAGGGCAGCCTCCGATCCATCCCGCCCGAGGAGGCAAG +
Preference number: 5 (lower is better)
Translates to: LCGARVHPFLALASG*LPGQPPIHPARGGK
Trigger: CTTGCCTCCTCGGGCGGGATGGATCGGAGGCTGCCCTGGAAGCCAACCAGACGCCAAAGCTAGAAAGGGGTGGACCCTGGCCCCGCATAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651776.1
CDS CCA 90 bp AGAGCTATGCGGGGCCAGGGTCCACCCCTTTCTAGCTTTGGCGTCTaGTTGGCTTCCAGGGCAGCCTCCGATCCATCCCGCCCGAGGAGG +
Preference number: 5 (lower is better)
Translates to: RAMRGQGPPLSSFGV*LASRAASDPSRPRR
Trigger: CCTCCTCGGGCGGGATGGATCGGAGGCTGCCCTGGAAGCCAACCAGACGCCAAAGCTAGAAAGGGGTGGACCCTGGCCCCGCATAGCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651776.1
CDS GCA 90 bp GGGTCTGAGGCCTGGGAATGTTGGAGGGAAGGTTGTTCAGGGAGCTaGAGCGCCTTGTGGAGCCACACCTCAGAGCCTGCGGGCACTGGA +
Preference number: 5 (lower is better)
Translates to: GSEAWECWREGCSGS*SALWSHTSEPAGTG
Trigger: TCCAGTGCCCGCAGGCTCTGAGGTGTGGCTCCACAAGGCGCTGCAGCTCCCTGAACAACCTTCCCTCCAACATTCCCAGGCCTCAGACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS GCA 90 bp CTCGCTGCGCTCCATGATCTCTTGGTAGAGGGGCAGGTAGACATGTaGAGGCACAGGCTGTGCCCGGAACTGCCTGTGGCACTCGGCCTC +
Preference number: 5 (lower is better)
Translates to: LAALHDLLVEGQVDM*RHRLCPELPVALGL
Trigger: GAGGCCGAGTGCCACAGGCAGTTCCGGGCACAGCCTGTGCCTGCACATGTCTACCTGCCCCTCTACCAAGAGATCATGGAGCGCAGCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS GCA 90 bp CAGCGCCTTGTGGAGCCACACCTCAGAGCCTGCGGGCACTGGACCTaGACCATCCCCCTGTCCTTGTCTTGGAAGAAACTCTCCAGGTCC +
Preference number: 5 (lower is better)
Translates to: QRLVEPHLRACGHWT*TIPLSLSWKKLSRS
Trigger: GGACCTGGAGAGTTTCTTCCAAGACAAGGACAGGGGGATGGTGCAGGTCCAGTGCCCGCAGGCTCTGAGGTGTGGCTCCACAAGGCGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS GCA 90 bp GATCTCTTGGTAGAGGGGCAGGTAGACATGTGCAGGCACAGGCTGTaGCCGGAACTGCCTGTGGCACTCGGCCTCTTCCTCACCCTGCCT +
Preference number: 5 (lower is better)
Translates to: DLLVEGQVDMCRHRL*PELPVALGLFLTLP
Trigger: AGGCAGGGTGAGGAAGAGGCCGAGTGCCACAGGCAGTTCCGGGCACAGCCTGTGCCTGCACATGTCTACCTGCCCCTCTACCAAGAGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS CCA 90 bp CATTTTATTTCCGGTTCTGAGGACGCCGCGGAAGCGGGACGGGATTaGAGTGCTCTGCTCCGGACGCACTACGTAGGTGGGCCTGCGGGA +
Preference number: 5 (lower is better)
Translates to: HFISGSEDAAEAGRD*SALLRTHYVGGPAG
Trigger: TCCCGCAGGCCCACCTACGTAGTGCGTCCGGAGCAGAGCACTCCAATCCCGTCCCGCTTCCGCGGCGTCCTCAGAACCGGAAATAAAATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651776.1
CDS TCA 90 bp TCCTCTTCTGGATCCCTGCCTGCCTTCGGGCCTCGCTGCGCTCCATaGTCTCTTGGTAGAGGGGCAGGTAGACATGTGCAGGCACAGGCT +
Preference number: 5 (lower is better)
Translates to: SSSGSLPAFGPRCAP*SLGRGAGRHVQAQA
Trigger: AGCCTGTGCCTGCACATGTCTACCTGCCCCTCTACCAAGAGATCATGGAGCGCAGCGAGGCCCGAAGGCAGGCAGGGATCCAGAAGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS GCA 90 bp GGGCTTCAAAGAAGAGAGGAGCAGTTCCTTCCTCTTCTGGATCCCTaGCTGCCTTCGGGCCTCGCTGCGCTCCATGATCTCTTGGTAGAG +
Preference number: 5 (lower is better)
Translates to: GLQRREEQFLPLLDP*LPSGLAALHDLLVE
Trigger: CTCTACCAAGAGATCATGGAGCGCAGCGAGGCCCGAAGGCAGGCAGGGATCCAGAAGAGGAAGGAACTGCTCCTCTCTTCTTTGAAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS GCA 90 bp CGAGGCTGGAATCTGAAGTTAGTGTGCAGAAACCCAAGCTTTTCCTaGTGGGTTCGGGTGGCTGTGCGGGGCTGTGGGTTAGCCCGGTTA +
Preference number: 5 (lower is better)
Translates to: RGWNLKLVCRNPSFS*WVRVAVRGCGLARL
Trigger: TAACCGGGCTAACCCACAGCCCCGCACAGCCACCCGAACCCAGCAGGAAAAGCTTGGGTTTCTGCACACTAACTTCAGATTCCAGCCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS GCA 90 bp TCAGGGACCACAGGATTCACCCGAGGCTGGAATCTGAAGTTAGTGTaGAGAAACCCAAGCTTTTCCTGCTGGGTTCGGGTGGCTGTGCGG +
Preference number: 5 (lower is better)
Translates to: SGTTGFTRGWNLKLV*RNPSFSCWVRVAVR
Trigger: CCGCACAGCCACCCGAACCCAGCAGGAAAAGCTTGGGTTTCTGCACACTAACTTCAGATTCCAGCCTCGGGTGAATCCTGTGGTCCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS CCA 90 bp AAGCTGAAGGGCTTCAAAGAAGAGAGGAGCAGTTCCTTCCTCTTCTaGATCCCTGCCTGCCTTCGGGCCTCGCTGCGCTCCATGATCTCT +
Preference number: 5 (lower is better)
Translates to: KLKGFKEERSSSFLF*IPACLRASLRSMIS
Trigger: AGAGATCATGGAGCGCAGCGAGGCCCGAAGGCAGGCAGGGATCCAGAAGAGGAAGGAACTGCTCCTCTCTTCTTTGAAGCCCTTCAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS CCA 90 bp GGCTGGAATCTGAAGTTAGTGTGCAGAAACCCAAGCTTTTCCTGCTaGGTTCGGGTGGCTGTGCGGGGCTGTGGGTTAGCCCGGTTACTA +
Preference number: 5 (lower is better)
Translates to: GWNLKLVCRNPSFSC*VRVAVRGCGLARLL
Trigger: TAGTAACCGGGCTAACCCACAGCCCCGCACAGCCACCCGAACCCAGCAGGAAAAGCTTGGGTTTCTGCACACTAACTTCAGATTCCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS GCA 90 bp AGGGCTGGCTCCAGAATGGACTTGGGAATCCTTCTGGTGGCCTTCTaGTTGGAGATCTTGGCTTCAGCTGTGGCTGCCAAGTCTCTCTGT +
Preference number: 5 (lower is better)
Translates to: RAGSRMDLGILLVAF*LEILASAVAAKSLC
Trigger: ACAGAGAGACTTGGCAGCCACAGCTGAAGCCAAGATCTCCAAGCAGAAGGCCACCAGAAGGATTCCCAAGTCCATTCTGGAGCCAGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS CCA 90 bp AGAGCCTGCGGGCACTGGACCTGCACCATCCCCCTGTCCTTGTCTTaGAAGAAACTCTCCAGGTCCTCCTCATCTTCAGAGAGGTTTTCA +
Preference number: 5 (lower is better)
Translates to: RACGHWTCTIPLSLS*KKLSRSSSSSERFS
Trigger: TGAAAACCTCTCTGAAGATGAGGAGGACCTGGAGAGTTTCTTCCAAGACAAGGACAGGGGGATGGTGCAGGTCCAGTGCCCGCAGGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CAA 90 bp TGTACAGGACAGTTCCCTTCCCCAACCCTCAACAAAGAATTAGGTGGCCCAAAAGGGAGCTGCAGCGCCTaGTGGAGCCACACCTCAGAG +
Preference number: 5 (lower is better)
Translates to: CTGQFPSPTLNKELGGPKGSCSA*WSHTSE
Trigger: CTCTGAGGTGTGGCTCCACAAGGCGCTGCAGCTCCC...TTTTGGGCCACCTAATTCTTTGTTGAGGGTTGGGGAAGGGAACTGTCCTGTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CAA 90 bp CACCCACTCCATGGACGCATTTATGTTTCTGCACTAGCCCCTTATAGGCATTTGGGAAGCGGGACGGGATaGGAGTGCTCTGCTCCGGAC +
Preference number: 5 (lower is better)
Translates to: HPLHGRIYVSALAPYRHLGSGTG*ECSAPD
Trigger: GTCCGGAGCAGAGCACTCCAATCCCGTCCCGCTTCC...CAAATGCCTATAAGGGGCTAGTGCAGAAACATAAATGCGTCCATGGAGTGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651776.1
CDS GCA 90 bp TCAGCTGTGGCTGCCAAGTCTCTCTGTCGAGCAGCTTCCTTTAGCTaGTCCTCCTTCTCCAGGAAGCTGAAGGGCTTCAAAGAAGAGAGG +
Preference number: 5 (lower is better)
Translates to: SAVAAKSLCRAASFS*SSFSRKLKGFKEER
Trigger: CCTCTCTTCTTTGAAGCCCTTCAGCTTCCTGGAGAAGGAGGAGCAGCTAAAGGAAGCTGCTCGACAGAGAGACTTGGCAGCCACAGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS CCA 90 bp GGGTTAGCCCGGTTACTAGAGGAGGCGATAGGGGAAGAGGCCATCTaGAGCATGTCCAGGGCTCTCATTTGGATGCGAATTTTCCTGAAG +
Preference number: 5 (lower is better)
Translates to: GLARLLEEAIGEEAI*SMSRALIWMRIFLK
Trigger: CTTCAGGAAAATTCGCATCCAAATGAGAGCCCTGGACATGCTCCAGATGGCCTCTTCCCCTATCGCCTCCTCTAGTAACCGGGCTAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CAA 90 bp ACTAGAAGTTGTAAGTTTTTCATCCCCCATGGGCTAGATCTGATATGCAGATGTCCATGGCGGCCCGGCTaGTCAGCCGATGCGGGGCTG +
Preference number: 5 (lower is better)
Translates to: TRSCKFFIPHGLDLICRCPWRPG*SADAGL
Trigger: CAGCCCCGCATCGGCTGACAAGCCGGGCCGCCATGG...ACATCTGCATATCAGATCTAGCCCATGGGGGATGAAAAACTTACAACTTCTAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000651776.1
CDS-3UTR CAA 90 bp TGTACAGGACAGTTCCCTTCCCCAACCCTCAACAAAGAATTAGGTGGCCCAAAAAGCTTTGGCGTCTGGTaGGCTTCCAGGGCAGCCTCC +
Preference number: 5 (lower is better)
Translates to: CTGQFPSPTLNKELGGPKSFGVW*ASRAAS
Trigger: GGAGGCTGCCCTGGAAGCCAACCAGACGCCAAAGCT...TTTTGGGCCACCTAATTCTTTGTTGAGGGTTGGGGAAGGGAACTGTCCTGTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651776.1
CDS-3UTR CAA 90 bp TGTACAGGACAGTTCCCTTCCCCAACCCTCAACAAAGAATTAGGTGGCCCAAAATTGCCCAGGCTGGTCTaGAACGCCTGGCTTCAAGCG +
Preference number: 5 (lower is better)
Translates to: CTGQFPSPTLNKELGGPKLPRLV*NAWLQA
Trigger: CGCTTGAAGCCAGGCGTTCAAGACCAGCCTGGGCAA...TTTTGGGCCACCTAATTCTTTGTTGAGGGTTGGGGAAGGGAACTGTCCTGTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286544.5
CDS-3UTR CAA 90 bp CTACTAAACATTCTACAATGTACAGGACAGTTCCCTTCCCCAACCCTCAACAAAGGGAGCTGCAGCGCCTaGTGGAGCCACACCTCAGAG +
Preference number: 5 (lower is better)
Translates to: LLNILQCTGQFPSPTLNKGSCSA*WSHTSE
Trigger: CTCTGAGGTGTGGCTCCACAAGGCGCTGCAGCTCCC...TTTGTTGAGGGTTGGGGAAGGGAACTGTCCTGTACATTGTAGAATGTTTAGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CAA 90 bp TGTACAGGACAGTTCCCTTCCCCAACCCTCAACAAAGAATTAGGTGGCCCAAAAGCGCTCCATGATCTCTaGGTAGAGGGGCAGGTAGAC +
Preference number: 5 (lower is better)
Translates to: CTGQFPSPTLNKELGGPKALHDL*VEGQVD
Trigger: GTCTACCTGCCCCTCTACCAAGAGATCATGGAGCGC...TTTTGGGCCACCTAATTCTTTGTTGAGGGTTGGGGAAGGGAACTGTCCTGTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CAA 90 bp CACCCACTCCATGGACGCATTTATGTTTCTGCACTAGCCCCTTATAGGCATTTGGGCTCCAGAATGGACTaGGGAATCCTTCTGGTGGCC +
Preference number: 5 (lower is better)
Translates to: HPLHGRIYVSALAPYRHLGSRMD*GILLVA
Trigger: GGCCACCAGAAGGATTCCCAAGTCCATTCTGGAGCC...CAAATGCCTATAAGGGGCTAGTGCAGAAACATAAATGCGTCCATGGAGTGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CAA 90 bp CAGGTAGTGGCCAGGGATGCTACTAAACATTCTACAATGTACAGGACAGTTCCCCTCAGCAAGAAGGGCTaGTTGCGAGTGGCCTCTTGG +
Preference number: 5 (lower is better)
Translates to: QVVARDATKHSTMYRTVPLSKKG*LRVASW
Trigger: CCAAGAGGCCACTCGCAACAAGCCCTTCTTGCTGAG...GGGAACTGTCCTGTACATTGTAGAATGTTTAGTAGCATCCCTGGCCACTACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS CCA 90 bp CGAGATTTTCTGGTGACTGATGAGACAGCTCCTCCAGTACTTTCCTaGGGCTTGCAGGCTGTTCTAGAGATCCTTCTAAACCCTGCTCTG +
Preference number: 5 (lower is better)
Translates to: RDFLVTDETAPPVLS*GLQAVLEILLNPAL
Trigger: CAGAGCAGGGTTTAGAAGGATCTCTAGAACAGCCTGCAAGCCCCAGGAAAGTACTGGAGGAGCTGTCTCATCAGTCACCAGAAAATCTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CAA 90 bp CACCCACTCCATGGACGCATTTATGTTTCTGCACTAGCCCCTTATAGGCATTTGAGGAACTCGTCAAGTTaGCTGGCCCTGGGCAAAACC +
Preference number: 5 (lower is better)
Translates to: HPLHGRIYVSALAPYRHLRNSSS*LALGKT
Trigger: GGTTTTGCCCAGGGCCAGCAAACTTGACGAGTTCCT...CAAATGCCTATAAGGGGCTAGTGCAGAAACATAAATGCGTCCATGGAGTGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CAA 90 bp TGCGCCTGGCCTGTTAATCTGCTACTCTTCATTTGTCCATCCTCTAACAGTAGCAGGAACTCGTCAAGTTaGCTGGCCCTGGGCAAAACC +
Preference number: 5 (lower is better)
Translates to: CAWPVNLLLFICPSSNSSRNSSS*LALGKT
Trigger: GGTTTTGCCCAGGGCCAGCAAACTTGACGAGTTCCT...GCTACTGTTAGAGGATGGACAAATGAAGAGTAGCAGATTAACAGGCCAGGCGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CAA 90 bp TGTACAGGACAGTTCCCTTCCCCAACCCTCAACAAAGAATTAGGTGGCCCAAAACCCCCTGTCCTTGTCTaGGAAGAAACTCTCCAGGTC +
Preference number: 5 (lower is better)
Translates to: CTGQFPSPTLNKELGGPKPPVLV*EETLQV
Trigger: GACCTGGAGAGTTTCTTCCAAGACAAGGACAGGGGG...TTTTGGGCCACCTAATTCTTTGTTGAGGGTTGGGGAAGGGAACTGTCCTGTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CAA 90 bp CAGGTAGTGGCCAGGGATGCTACTAAACATTCTACAATGTACAGGACAGTTCCCCCCCCTGTCCTTGTCTaGGAAGAAACTCTCCAGGTC +
Preference number: 5 (lower is better)
Translates to: QVVARDATKHSTMYRTVPPPVLV*EETLQV
Trigger: GACCTGGAGAGTTTCTTCCAAGACAAGGACAGGGGG...GGGAACTGTCCTGTACATTGTAGAATGTTTAGTAGCATCCCTGGCCACTACCTG
51% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CAA 90 bp CACCCACTCCATGGACGCATTTATGTTTCTGCACTAGCCCCTTATAGGCATTTGTTCTGCTTGGAGATCTaGGCTTCAGCTGTGGCTGCC +
Preference number: 5 (lower is better)
Translates to: HPLHGRIYVSALAPYRHLFCLEI*ASAVAA
Trigger: GGCAGCCACAGCTGAAGCCAAGATCTCCAAGCAGAA...CAAATGCCTATAAGGGGCTAGTGCAGAAACATAAATGCGTCCATGGAGTGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CAA 90 bp CACCCACTCCATGGACGCATTTATGTTTCTGCACTAGCCCCTTATAGGCATTTGAGCAAGAAGGGCTTGTaGCGAGTGGCCTCTTGGGTT +
Preference number: 5 (lower is better)
Translates to: HPLHGRIYVSALAPYRHLSKKGL*RVASWV
Trigger: AACCCAAGAGGCCACTCGCAACAAGCCCTTCTTGCT...CAAATGCCTATAAGGGGCTAGTGCAGAAACATAAATGCGTCCATGGAGTGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CAA 90 bp CAGGTAGTGGCCAGGGATGCTACTAAACATTCTACAATGTACAGGACAGTTCCCGGGGATCCATGGCTTTaGCACGCAAGGTCACAGATT +
Preference number: 5 (lower is better)
Translates to: QVVARDATKHSTMYRTVPGDPWL*HARSQI
Trigger: AATCTGTGACCTTGCGTGCAAAAGCCATGGATCCCC...GGGAACTGTCCTGTACATTGTAGAATGTTTAGTAGCATCCCTGGCCACTACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CAA 90 bp TGTACAGGACAGTTCCCTTCCCCAACCCTCAACAAAGAATTAGGTGGCCCAAAAAACAGCCCGGGTGCCTaGACCCTTGTTTCTCACAAA +
Preference number: 5 (lower is better)
Translates to: CTGQFPSPTLNKELGGPKNSPGA*TLVSHK
Trigger: TTTGTGAGAAACAAGGGTCAAGGCACCCGGGCTGTT...TTTTGGGCCACCTAATTCTTTGTTGAGGGTTGGGGAAGGGAACTGTCCTGTACA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CAA 90 bp CACCCACTCCATGGACGCATTTATGTTTCTGCACTAGCCCCTTATAGGCATTTGAACAGCCCGGGTGCCTaGACCCTTGTTTCTCACAAA +
Preference number: 5 (lower is better)
Translates to: HPLHGRIYVSALAPYRHLNSPGA*TLVSHK
Trigger: TTTGTGAGAAACAAGGGTCAAGGCACCCGGGCTGTT...CAAATGCCTATAAGGGGCTAGTGCAGAAACATAAATGCGTCCATGGAGTGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CAA 90 bp CAGACAAGGAATGAAGCAATGACTGTGGGCTGGGAAACTGTACCTACCTCTCTTTTTGGTCTCTTTCTCTaGAACAGCCCGGGTGCCTTG +
Preference number: 5 (lower is better)
Translates to: QTRNEAMTVGWETVPTSLFGLFL*NSPGAL
Trigger: CAAGGCACCCGGGCTGTTCAAGAGAAAGAGACCAAA...AAGAGAGGTAGGTACAGTTTCCCAGCCCACAGTCATTGCTTCATTCCTTGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556794.5
CDS-3UTR CAA 90 bp TGTACAGGACAGTTCCCTTCCCCAACCCTCAACAAAGAATTAGGTGGCCCAAAATTTGGTCTCTTTCTCTaGAACAGCCCGGGTGCCTTG +
Preference number: 5 (lower is better)
Translates to: CTGQFPSPTLNKELGGPKFGLFL*NSPGAL
Trigger: CAAGGCACCCGGGCTGTTCAAGAGAAAGAGACCAAA...TTTTGGGCCACCTAATTCTTTGTTGAGGGTTGGGGAAGGGAACTGTCCTGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CAA 90 bp CACCCACTCCATGGACGCATTTATGTTTCTGCACTAGCCCCTTATAGGCATTTGGTACTTTCCTGGGGCTaGCAGGCTGTTCTAGAGATC +
Preference number: 5 (lower is better)
Translates to: HPLHGRIYVSALAPYRHLVLSWG*QAVLEI
Trigger: GATCTCTAGAACAGCCTGCAAGCCCCAGGAAAGTAC...CAAATGCCTATAAGGGGCTAGTGCAGAAACATAAATGCGTCCATGGAGTGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CAA 90 bp CAGGTAGTGGCCAGGGATGCTACTAAACATTCTACAATGTACAGGACAGTTCCCGTACTTTCCTGGGGCTaGCAGGCTGTTCTAGAGATC +
Preference number: 5 (lower is better)
Translates to: QVVARDATKHSTMYRTVPVLSWG*QAVLEI
Trigger: GATCTCTAGAACAGCCTGCAAGCCCCAGGAAAGTAC...GGGAACTGTCCTGTACATTGTAGAATGTTTAGTAGCATCCCTGGCCACTACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CAA 90 bp CAGGTAGTGGCCAGGGATGCTACTAAACATTCTACAATGTACAGGACAGTTCCCTGGAGACATTTTTGGTaGTCACAGCTGGGGAGAGGG +
Preference number: 5 (lower is better)
Translates to: QVVARDATKHSTMYRTVPWRHFW*SQLGRG
Trigger: CCCTCTCCCCAGCTGTGACAACCAAAAATGTCTCCA...GGGAACTGTCCTGTACATTGTAGAATGTTTAGTAGCATCCCTGGCCACTACCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CAA 90 bp TGCGCCTGGCCTGTTAATCTGCTACTCTTCATTTGTCCATCCTCTAACAGTAGCGAAATGAGGTCTGTGTaGCCCAGGCTGGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: CAWPVNLLLFICPSSNSSEMRSV*PRLVLN
Trigger: GTTCAAGACCAGCCTGGGCAACACAGACCTCATTTC...GCTACTGTTAGAGGATGGACAAATGAAGAGTAGCAGATTAACAGGCCAGGCGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286544.5
CDS-3UTR CAA 90 bp TTAGAGCAGGCACTCTTGCTATCAGTCATCCTGTCTCCACAGCTACTGAGAAAAACCATCCCCCTGTCCTaGTCTTGGAAGAAACTCTCC +
Preference number: 5 (lower is better)
Translates to: LEQALLLSVILSPQLLRKTIPLS*SWKKLS
Trigger: GGAGAGTTTCTTCCAAGACAAGGACAGGGGGATGGT...TTTTCTCAGTAGCTGTGGAGACAGGATGACTGATAGCAAGAGTGCCTGCTCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000286544.5
CDS-3UTR CAA 90 bp CTACTAAACATTCTACAATGTACAGGACAGTTCCCTTCCCCAACCCTCAACAAAGGCTCCAGAATGGACTaGGGAATCCTTCTGGTGGCC +
Preference number: 5 (lower is better)
Translates to: LLNILQCTGQFPSPTLNKGSRMD*GILLVA
Trigger: GGCCACCAGAAGGATTCCCAAGTCCATTCTGGAGCC...TTTGTTGAGGGTTGGGGAAGGGAACTGTCCTGTACATTGTAGAATGTTTAGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CAA 90 bp GAGCAACTCTATCTGATCTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCAACAGCCCGGGTGCCTaGACCCTTGTTTCTCACAAA +
Preference number: 5 (lower is better)
Translates to: EQLYLISKCVYWEQDALANSPGA*TLVSHK
Trigger: TTTGTGAGAAACAAGGGTCAAGGCACCCGGGCTGTT...GGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGATAGAGTTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556794.5
CDS TCA 90 bp TCCTCCTCATCTTCAGAGAGGTTTTCATCACTCTCTGGGTCAGACTaGAAGAGAGACTCCAACAGACACCATCTCCCTTTCTGCTTCAGT +
Preference number: 5 (lower is better)
Translates to: SSSSSERFSSLSGSD*KRDSNRHHLPFCFS
Trigger: ACTGAAGCAGAAAGGGAGATGGTGTCTGTTGGAGTCTCTCTTTCAGTCTGACCCAGAGAGTGATGAAAACCTCTCTGAAGATGAGGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS GCA 90 bp ACTTTCCTGGGGCTTGCAGGCTGTTCTAGAGATCCTTCTAAACCCTaGTCTGGATCTCTGATGCTGAGTTTTGTAGTTTCTTGGAACCTG +
Preference number: 5 (lower is better)
Translates to: TFLGLAGCSRDPSKP*SGSLMLSFVVSWNL
Trigger: CAGGTTCCAAGAAACTACAAAACTCAGCATCAGAGATCCAGAGCAGGGTTTAGAAGGATCTCTAGAACAGCCTGCAAGCCCCAGGAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CAA 90 bp ACTAGAAGTTGTAAGTTTTTCATCCCCCATGGGCTAGATCTGATATGCAGATGTGCGCTCCATGATCTCTaGGTAGAGGGGCAGGTAGAC +
Preference number: 5 (lower is better)
Translates to: TRSCKFFIPHGLDLICRCALHDL*VEGQVD
Trigger: GTCTACCTGCCCCTCTACCAAGAGATCATGGAGCGC...ACATCTGCATATCAGATCTAGCCCATGGGGGATGAAAAACTTACAACTTCTAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CAA 90 bp TGCGCCTGGCCTGTTAATCTGCTACTCTTCATTTGTCCATCCTCTAACAGTAGCGTCCAGGGCTCTCATTaGGATGCGAATTTTCCTGAA +
Preference number: 5 (lower is better)
Translates to: CAWPVNLLLFICPSSNSSVQGSH*DANFPE
Trigger: TTCAGGAAAATTCGCATCCAAATGAGAGCCCTGGAC...GCTACTGTTAGAGGATGGACAAATGAAGAGTAGCAGATTAACAGGCCAGGCGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CAA 90 bp GATTTACCCTTAGGATTCCATACCAGTAAAACTGAACCGAGGAGTCTTAGGAAACTCAGCAAGAAGGGCTaGTTGCGAGTGGCCTCTTGG +
Preference number: 5 (lower is better)
Translates to: DLPLGFHTSKTEPRSLRKLSKKG*LRVASW
Trigger: CCAAGAGGCCACTCGCAACAAGCCCTTCTTGCTGAG...TTTCCTAAGACTCCTCGGTTCAGTTTTACTGGTATGGAATCCTAAGGGTAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286544.5
CDS-3UTR CAA 90 bp CACCCACTCCATGGACGCATTTATGTTTCTGCACTAGCCCCTTATAGGCATTTGGCTCTTTTACGGTCATaGTTCCGGTTCTCTTTCAGC +
Preference number: 5 (lower is better)
Translates to: HPLHGRIYVSALAPYRHLALLRS*FRFSFS
Trigger: GCTGAAAGAGAACCGGAACAATGACCGTAAAAGAGC...CAAATGCCTATAAGGGGCTAGTGCAGAAACATAAATGCGTCCATGGAGTGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CAA 90 bp CAGGTAGTGGCCAGGGATGCTACTAAACATTCTACAATGTACAGGACAGTTCCCGCTCTTTTACGGTCATaGTTCCGGTTCTCTTTCAGC +
Preference number: 5 (lower is better)
Translates to: QVVARDATKHSTMYRTVPALLRS*FRFSFS
Trigger: GCTGAAAGAGAACCGGAACAATGACCGTAAAAGAGC...GGGAACTGTCCTGTACATTGTAGAATGTTTAGTAGCATCCCTGGCCACTACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CAA 90 bp CAGGTAGTGGCCAGGGATGCTACTAAACATTCTACAATGTACAGGACAGTTCCCTATCTGGAGACATTTTaGGTTGTCACAGCTGGGGAG +
Preference number: 5 (lower is better)
Translates to: QVVARDATKHSTMYRTVPYLETF*VVTAGE
Trigger: CTCCCCAGCTGTGACAACCAAAAATGTCTCCAGATA...GGGAACTGTCCTGTACATTGTAGAATGTTTAGTAGCATCCCTGGCCACTACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CAA 90 bp CTACTAAACATTCTACAATGTACAGGACAGTTCCCTTCCCCAACCCTCAACAAACACCCCTTTCTAGCTTaGGCGTCTGGTTGGCTTCCA +
Preference number: 5 (lower is better)
Translates to: LLNILQCTGQFPSPTLNKHPFLA*ASGWLP
Trigger: TGGAAGCCAACCAGACGCCAAAGCTAGAAAGGGGTG...TTTGTTGAGGGTTGGGGAAGGGAACTGTCCTGTACATTGTAGAATGTTTAGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651776.1
CDS-3UTR CAA 90 bp GATTTACCCTTAGGATTCCATACCAGTAAAACTGAACCGAGGAGTCTTAGGAAAAGCAAGAAGGGCTTGTaGCGAGTGGCCTCTTGGGTT +
Preference number: 5 (lower is better)
Translates to: DLPLGFHTSKTEPRSLRKSKKGL*RVASWV
Trigger: AACCCAAGAGGCCACTCGCAACAAGCCCTTCTTGCT...TTTCCTAAGACTCCTCGGTTCAGTTTTACTGGTATGGAATCCTAAGGGTAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286544.5
CDS-3UTR CAA 90 bp CACCCACTCCATGGACGCATTTATGTTTCTGCACTAGCCCCTTATAGGCATTTGCAAAGAGATAGGGCCTaGTTTGTATTCGCTGCTTCA +
Preference number: 5 (lower is better)
Translates to: HPLHGRIYVSALAPYRHLQRDRA*FVFAAS
Trigger: TGAAGCAGCGAATACAAACAAGGCCCTATCTCTTTG...CAAATGCCTATAAGGGGCTAGTGCAGAAACATAAATGCGTCCATGGAGTGGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CAA 90 bp CACCCACTCCATGGACGCATTTATGTTTCTGCACTAGCCCCTTATAGGCATTTGCTGAGCCTCCCCACTTaGATTTCCTTGAACTATTCT +
Preference number: 5 (lower is better)
Translates to: HPLHGRIYVSALAPYRHLLSLPT*ISLNYS
Trigger: AGAATAGTTCAAGGAAATCAAAGTGGGGAGGCTCAG...CAAATGCCTATAAGGGGCTAGTGCAGAAACATAAATGCGTCCATGGAGTGGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CAA 90 bp TTAGAGCAGGCACTCTTGCTATCAGTCATCCTGTCTCCACAGCTACTGAGAAAATTAGAGCAGGCACTCTaGCTATCAGTCATCCTGTCT +
Preference number: 5 (lower is better)
Translates to: LEQALLLSVILSPQLLRKLEQAL*LSVILS
Trigger: AGACAGGATGACTGATAGCAAGAGTGCCTGCTCTAA...TTTTCTCAGTAGCTGTGGAGACAGGATGACTGATAGCAAGAGTGCCTGCTCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286544.5
CDS-3UTR CAA 90 bp ACTAGAAGTTGTAAGTTTTTCATCCCCCATGGGCTAGATCTGATATGCAGATGTGTTGCGAGTGGCCTCTaGGGTTTCTCTTCTTTTGGC +
Preference number: 5 (lower is better)
Translates to: TRSCKFFIPHGLDLICRCVASGL*GFSSFG
Trigger: GCCAAAAGAAGAGAAACCCAAGAGGCCACTCGCAAC...ACATCTGCATATCAGATCTAGCCCATGGGGGATGAAAAACTTACAACTTCTAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CAA 90 bp TGCGCCTGGCCTGTTAATCTGCTACTCTTCATTTGTCCATCCTCTAACAGTAGCTTCTTGGCTAGATCCTaGGCAACTTGTTCAAAGAGA +
Preference number: 5 (lower is better)
Translates to: CAWPVNLLLFICPSSNSSFLARS*ATCSKR
Trigger: TCTCTTTGAACAAGTTGCCAAGGATCTAGCCAAGAA...GCTACTGTTAGAGGATGGACAAATGAAGAGTAGCAGATTAACAGGCCAGGCGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CAA 90 bp GTGCTGACTCCTGGAAGAGCAACTCTATCTGATCTCAAAATGCGTATACTGGGAAGATGCCTTGTTGCTTaGAAGAAGGGAGTGATGTCA +
Preference number: 5 (lower is better)
Translates to: VLTPGRATLSDLKMRILGRCLVA*KKGVMS
Trigger: TGACATCACTCCCTTCTTCAAAGCAACAAGGCATCT...TCCCAGTATACGCATTTTGAGATCAGATAGAGTTGCTCTTCCAGGAGTCAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556794.5
CDS-3UTR CAA 90 bp GTGCTGACTCCTGGAAGAGCAACTCTATCTGATCTCAAAATGCGTATACTGGGAAGCTTCACCAGGAAGTaGAGTTTTCAAGATGCCTTG +
Preference number: 5 (lower is better)
Translates to: VLTPGRATLSDLKMRILGSFTRK*SFQDAL
Trigger: CAAGGCATCTTGAAAACTCAACTTCCTGGTGAAGCT...TCCCAGTATACGCATTTTGAGATCAGATAGAGTTGCTCTTCCAGGAGTCAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556794.5
CDS-3UTR CAA 90 bp CTACTAAACATTCTACAATGTACAGGACAGTTCCCTTCCCCAACCCTCAACAAAAGGTTCGTTTTCCGATaGGCCTATTTTCTCCGCGCA +
Preference number: 5 (lower is better)
Translates to: LLNILQCTGQFPSPTLNKRFVFR*AYFLRA
Trigger: TGCGCGGAGAAAATAGGCCAATCGGAAAACGAACCT...TTTGTTGAGGGTTGGGGAAGGGAACTGTCCTGTACATTGTAGAATGTTTAGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000651776.1
CDS-3UTR CAA 90 bp CCTGCCTTGACTCAAACCCAAGTTAGCTGCTTAATATTTTTCAAAAGCAGTAATTTCTGCTTGGAGATCTaGGCTTCAGCTGTGGCTGCC +
Preference number: 5 (lower is better)
Translates to: PALTQTQVSCLIFFKSSNFCLEI*ASAVAA
Trigger: GGCAGCCACAGCTGAAGCCAAGATCTCCAAGCAGAA...ATTACTGCTTTTGAAAAATATTAAGCAGCTAACTTGGGTTTGAGTCAAGGCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CAA 90 bp GAGGTACTATCTTGTCCTATACACTTCTACTTGGTCACTTTGCTTTCTTCGTTAGGGGATCCATGGCTTTaGCACGCAAGGTCACAGATT +
Preference number: 5 (lower is better)
Translates to: EVLSCPIHFYLVTLLSSLGDPWL*HARSQI
Trigger: AATCTGTGACCTTGCGTGCAAAAGCCATGGATCCCC...TAACGAAGAAAGCAAAGTGACCAAGTAGAAGTGTATAGGACAAGATAGTACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556794.5
CDS-3UTR CAA 90 bp CTGGAAGAGCAACTCTATCTGATCTCAAAATGCGTATACTGGGAACAGGATGCCTTCTTGGCTAGATCCTaGGCAACTTGTTCAAAGAGA +
Preference number: 5 (lower is better)
Translates to: LEEQLYLISKCVYWEQDAFLARS*ATCSKR
Trigger: TCTCTTTGAACAAGTTGCCAAGGATCTAGCCAAGAA...GGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGATAGAGTTGCTCTTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556794.5
CDS-3UTR CAA 90 bp CAGGTAGTGGCCAGGGATGCTACTAAACATTCTACAATGTACAGGACAGTTCCCGAGTTTTGTAGTTTCTaGGAACCTGGGAAAATCCTT +
Preference number: 5 (lower is better)
Translates to: QVVARDATKHSTMYRTVPEFCSF*EPGKIL
Trigger: AAGGATTTTCCCAGGTTCCAAGAAACTACAAAACTC...GGGAACTGTCCTGTACATTGTAGAATGTTTAGTAGCATCCCTGGCCACTACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CAA 90 bp TGCCTTAGCCCACAACAGAACCAGAATGAATCTTTGAAGGCACAAGACTCTGCTCCTATACACTTCTACTaGGTCACTTTGCTTTCTTCG +
Preference number: 5 (lower is better)
Translates to: CLSPQQNQNESLKAQDSAPIHFY*VTLLSS
Trigger: CGAAGAAAGCAAAGTGACCAAGTAGAAGTGTATAGG...AGCAGAGTCTTGTGCCTTCAAAGATTCATTCTGGTTCTGTTGTGGGCTAAGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556794.5
CDS-3UTR CAA 90 bp CAGACAAGGAATGAAGCAATGACTGTGGGCTGGGAAACTGTACCTACCTCTCTTGTGATGTCAATTCTCTaGTTACATTCTCCCTTTAGC +
Preference number: 5 (lower is better)
Translates to: QTRNEAMTVGWETVPTSLVMSIL*LHSPFS
Trigger: GCTAAAGGGAGAATGTAACAAGAGAATTGACATCAC...AAGAGAGGTAGGTACAGTTTCCCAGCCCACAGTCATTGCTTCATTCCTTGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556794.5
CDS-3UTR CAA 90 bp CCTGCCTTGACTCAAACCCAAGTTAGCTGCTTAATATTTTTCAAAAGCAGTAATGGGGATCCATGGCTTTaGCACGCAAGGTCACAGATT +
Preference number: 5 (lower is better)
Translates to: PALTQTQVSCLIFFKSSNGDPWL*HARSQI
Trigger: AATCTGTGACCTTGCGTGCAAAAGCCATGGATCCCC...ATTACTGCTTTTGAAAAATATTAAGCAGCTAACTTGGGTTTGAGTCAAGGCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CAA 90 bp AAGAAGGGAGTGATGTCAATTCTCTTGTTACATTCTCCCTTTAGCAACCTGAGTGCTCTTTTACGGTCATaGTTCCGGTTCTCTTTCAGC +
Preference number: 5 (lower is better)
Translates to: KKGVMSILLLHSPFSNLSALLRS*FRFSFS
Trigger: GCTGAAAGAGAACCGGAACAATGACCGTAAAAGAGC...ACTCAGGTTGCTAAAGGGAGAATGTAACAAGAGAATTGACATCACTCCCTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556794.5
CDS-3UTR CAA 90 bp GAAGAGCAACTCTATCTGATCTCAAAATGCGTATACTGGGAACAGGATGCCTTAGAGATAGGGCCTTGTTaGTATTCGCTGCTTCATTTC +
Preference number: 5 (lower is better)
Translates to: EEQLYLISKCVYWEQDALEIGPC*YSLLHF
Trigger: GAAATGAAGCAGCGAATACAAACAAGGCCCTATCTC...TAAGGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGATAGAGTTGCTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556794.5
CDS-3UTR CAA 90 bp ACAGAGCTTCACCAGGAAGTTGAGTTTTCAAGATGCCTTGTTGCTTTGAAGAAGCAAAGAGATAGGGCCTaGTTTGTATTCGCTGCTTCA +
Preference number: 5 (lower is better)
Translates to: TELHQEVEFSRCLVALKKQRDRA*FVFAAS
Trigger: TGAAGCAGCGAATACAAACAAGGCCCTATCTCTTTG...CTTCTTCAAAGCAACAAGGCATCTTGAAAACTCAACTTCCTGGTGAAGCTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556794.5
CDS-3UTR CAA 90 bp TGCGCCTGGCCTGTTAATCTGCTACTCTTCATTTGTCCATCCTCTAACAGTAGCTTAGAATGCCAGTTTTaGCTTCATGCAGCCATTTAT +
Preference number: 5 (lower is better)
Translates to: CAWPVNLLLFICPSSNSSLECQF*LHAAIY
Trigger: ATAAATGGCTGCATGAAGCAAAAACTGGCATTCTAA...GCTACTGTTAGAGGATGGACAAATGAAGAGTAGCAGATTAACAGGCCAGGCGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CAA 90 bp GAGCAACTCTATCTGATCTCAAAATGCGTATACTGGGAACAGGATGCCTTAGCCAGCCCAGTCAGTTCTTaGGCTCTTGTTTTATACAAA +
Preference number: 5 (lower is better)
Translates to: EQLYLISKCVYWEQDALASPVSS*ALVLYK
Trigger: TTTGTATAAAACAAGAGCCAAAGAACTGACTGGGCT...GGCTAAGGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGATAGAGTTGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556794.5
CDS-3UTR CAA 90 bp CTGGAAGAGCAACTCTATCTGATCTCAAAATGCGTATACTGGGAACAGGATGCCTCACAGATTTGGACATaGCTTGAGACTTCTTTTTGT +
Preference number: 5 (lower is better)
Translates to: LEEQLYLISKCVYWEQDASQIWT*LETSFC
Trigger: ACAAAAAGAAGTCTCAAGCAATGTCCAAATCTGTGA...GGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGATAGAGTTGCTCTTCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556794.5
CDS-3UTR CAA 90 bp ACTAGAAGTTGTAAGTTTTTCATCCCCCATGGGCTAGATCTGATATGCAGATGTCAAAGAGATAGGGCCTaGTTTGTATTCGCTGCTTCA +
Preference number: 5 (lower is better)
Translates to: TRSCKFFIPHGLDLICRCQRDRA*FVFAAS
Trigger: TGAAGCAGCGAATACAAACAAGGCCCTATCTCTTTG...ACATCTGCATATCAGATCTAGCCCATGGGGGATGAAAAACTTACAACTTCTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CAA 90 bp CAACAAAGAATTAGGTGGCCCAAAATATTAATAGCACTGAGGATAAGAAATCCTTTTGGTCTCTTTCTCTaGAACAGCCCGGGTGCCTTG +
Preference number: 5 (lower is better)
Translates to: QQRIRWPKILIALRIRNPFGLFL*NSPGAL
Trigger: CAAGGCACCCGGGCTGTTCAAGAGAAAGAGACCAAA...AGGATTTCTTATCCTCAGTGCTATTAATATTTTGGGCCACCTAATTCTTTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CAA 90 bp CAACAAAGAATTAGGTGGCCCAAAATATTAATAGCACTGAGGATAAGAAATCCTTGGAGACATTTTTGGTaGTCACAGCTGGGGAGAGGG +
Preference number: 5 (lower is better)
Translates to: QQRIRWPKILIALRIRNPWRHFW*SQLGRG
Trigger: CCCTCTCCCCAGCTGTGACAACCAAAAATGTCTCCA...AGGATTTCTTATCCTCAGTGCTATTAATATTTTGGGCCACCTAATTCTTTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CAA 90 bp CTGGAAGAGCAACTCTATCTGATCTCAAAATGCGTATACTGGGAACAGGATGCCTTCTACTTGGTCACTTaGCTTTCTTCGTTAATGGAA +
Preference number: 5 (lower is better)
Translates to: LEEQLYLISKCVYWEQDAFYLVT*LSSLME
Trigger: TTCCATTAACGAAGAAAGCAAAGTGACCAAGTAGAA...GGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGATAGAGTTGCTCTTCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556794.5
CDS-3UTR CAA 90 bp GAAGAGCAACTCTATCTGATCTCAAAATGCGTATACTGGGAACAGGATGCCTTAAACCAGAATGAATCTTaGAAGGCACAAGACTCTGCT +
Preference number: 5 (lower is better)
Translates to: EEQLYLISKCVYWEQDALNQNES*KAQDSA
Trigger: AGCAGAGTCTTGTGCCTTCAAAGATTCATTCTGGTT...TAAGGCATCCTGTTCCCAGTATACGCATTTTGAGATCAGATAGAGTTGCTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556794.5
CDS-3UTR CAA 90 bp CCTGCCTTGACTCAAACCCAAGTTAGCTGCTTAATATTTTTCAAAAGCAGTAATGTCCAGGGCTCTCATTaGGATGCGAATTTTCCTGAA +
Preference number: 5 (lower is better)
Translates to: PALTQTQVSCLIFFKSSNVQGSH*DANFPE
Trigger: TTCAGGAAAATTCGCATCCAAATGAGAGCCCTGGAC...ATTACTGCTTTTGAAAAATATTAAGCAGCTAACTTGGGTTTGAGTCAAGGCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CAA 90 bp GATTTACCCTTAGGATTCCATACCAGTAAAACTGAACCGAGGAGTCTTAGGAAATTCTTGGCTAGATCCTaGGCAACTTGTTCAAAGAGA +
Preference number: 5 (lower is better)
Translates to: DLPLGFHTSKTEPRSLRKFLARS*ATCSKR
Trigger: TCTCTTTGAACAAGTTGCCAAGGATCTAGCCAAGAA...TTTCCTAAGACTCCTCGGTTCAGTTTTACTGGTATGGAATCCTAAGGGTAAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000556794.5
CDS-3UTR CAA 90 bp CTACTAAACATTCTACAATGTACAGGACAGTTCCCTTCCCCAACCCTCAACAAATCACAGATTTGGACATaGCTTGAGACTTCTTTTTGT +
Preference number: 5 (lower is better)
Translates to: LLNILQCTGQFPSPTLNKSQIWT*LETSFC
Trigger: ACAAAAAGAAGTCTCAAGCAATGTCCAAATCTGTGA...TTTGTTGAGGGTTGGGGAAGGGAACTGTCCTGTACATTGTAGAATGTTTAGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CAA 90 bp CCTGCCTTGACTCAAACCCAAGTTAGCTGCTTAATATTTTTCAAAAGCAGTAATGAGATAGGGCCTTGTTaGTATTCGCTGCTTCATTTC +
Preference number: 5 (lower is better)
Translates to: PALTQTQVSCLIFFKSSNEIGPC*YSLLHF
Trigger: GAAATGAAGCAGCGAATACAAACAAGGCCCTATCTC...ATTACTGCTTTTGAAAAATATTAAGCAGCTAACTTGGGTTTGAGTCAAGGCAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CAA 90 bp GATTTACCCTTAGGATTCCATACCAGTAAAACTGAACCGAGGAGTCTTAGGAAAGAGTTTTGTAGTTTCTaGGAACCTGGGAAAATCCTT +
Preference number: 5 (lower is better)
Translates to: DLPLGFHTSKTEPRSLRKEFCSF*EPGKIL
Trigger: AAGGATTTTCCCAGGTTCCAAGAAACTACAAAACTC...TTTCCTAAGACTCCTCGGTTCAGTTTTACTGGTATGGAATCCTAAGGGTAAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000286544.5
CDS-3UTR CAA 90 bp ACTAGAAGTTGTAAGTTTTTCATCCCCCATGGGCTAGATCTGATATGCAGATGTTTAGAATGCCAGTTTTaGCTTCATGCAGCCATTTAT +
Preference number: 5 (lower is better)
Translates to: TRSCKFFIPHGLDLICRCLECQF*LHAAIY
Trigger: ATAAATGGCTGCATGAAGCAAAAACTGGCATTCTAA...ACATCTGCATATCAGATCTAGCCCATGGGGGATGAAAAACTTACAACTTCTAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS-3UTR CAA 90 bp CAACAAAGAATTAGGTGGCCCAAAATATTAATAGCACTGAGGATAAGAAATCCTTCACAGATTTGGACATaGCTTGAGACTTCTTTTTGT +
Preference number: 5 (lower is better)
Translates to: QQRIRWPKILIALRIRNPSQIWT*LETSFC
Trigger: ACAAAAAGAAGTCTCAAGCAATGTCCAAATCTGTGA...AGGATTTCTTATCCTCAGTGCTATTAATATTTTGGGCCACCTAATTCTTTGTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS GCA 72 bp GGCGGCCCGGCTTGTCAGCCGATGCGGGGCTGTGCGTaGAGCTCCCCACAGCGGCCCGCTGGTGTCCTGGCG +
Preference number: 6 (lower is better)
Translates to: GGPACQPMRGCA*SSPQRPAGVLA
Trigger: CGCCAGGACACCAGCGGGCCGCTGTGGGGAGCTGCACGCACAGCCCCGCATCGGCTGACAAGCCGGGCCGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651776.1
CDS GCA 72 bp CCATGGCGGCCCGGCTTGTCAGCCGATGCGGGGCTGTaGGTGCAGCTCCCCACAGCGGCCCGCTGGTGTCCT +
Preference number: 6 (lower is better)
Translates to: PWRPGLSADAGL*VQLPTAARWCP
Trigger: AGGACACCAGCGGGCCGCTGTGGGGAGCTGCACGCACAGCCCCGCATCGGCTGACAAGCCGGGCCGCCATGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651776.1
CDS CAA 72 bp GTGCGACGGCGCAGGTCTGCACCATGGCGGCCCGGCTaGTCAGCCGATGCGGGGCTGTGCGTGCAGCTCCCC +
Preference number: 6 (lower is better)
Translates to: VRRRRSAPWRPG*SADAGLCVQLP
Trigger: GGGGAGCTGCACGCACAGCCCCGCATCGGCTGACAAGCCGGGCCGCCATGGTGCAGACCTGCGCCGTCGCAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651776.1
CDS GCA 72 bp GGGCCTGCGGGAGTTCTGAGTGCGACGGCGCAGGTCTaGACCATGGCGGCCCGGCTTGTCAGCCGATGCGGG +
Preference number: 6 (lower is better)
Translates to: GPAGVLSATAQV*TMAARLVSRCG
Trigger: CCCGCATCGGCTGACAAGCCGGGCCGCCATGGTGCAGACCTGCGCCGTCGCACTCAGAACTCCCGCAGGCCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651776.1
CDS GCA 72 bp GACGCACTACGTAGGTGGGCCTGCGGGAGTTCTGAGTaGGACGGCGCAGGTCTGCACCATGGCGGCCCGGCT +
Preference number: 6 (lower is better)
Translates to: DALRRWACGSSE*DGAGLHHGGPA
Trigger: AGCCGGGCCGCCATGGTGCAGACCTGCGCCGTCGCACTCAGAACTCCCGCAGGCCCACCTACGTAGTGCGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651776.1
CDS CCA 72 bp CTGGTGGCTGTGGGGAATCCTGCCTCCTTCCGGTGGTaGCAGCATCACAGGGCCGCTGAGGGTGGCGCAGGT +
Preference number: 6 (lower is better)
Translates to: LVAVGNPASFRW*QHHRAAEGGAG
Trigger: ACCTGCGCCACCCTCAGCGGCCCTGTGATGCTGCCACCACCGGAAGGAGGCAGGATTCCCCACAGCCACCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS TCA 72 bp TGCCTCCTTCCGGTGGTGGCAGCATCACAGGGCCGCTaGGGGTGGCGCAGGTTGGCGGTCCTCAGCAAGAAG +
Preference number: 6 (lower is better)
Translates to: CLLPVVAASQGR*GWRRLAVLSKK
Trigger: CTTCTTGCTGAGGACCGCCAACCTGCGCCACCCTCAGCGGCCCTGTGATGCTGCCACCACCGGAAGGAGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS GCA 72 bp GAGTGCTCTGCTCCGGACGCACTACGTAGGTGGGCCTaGGGGAGTTCTGAGTGCGACGGCGCAGGTCTGCAC +
Preference number: 6 (lower is better)
Translates to: ECSAPDALRRWA*GSSECDGAGLH
Trigger: GTGCAGACCTGCGCCGTCGCACTCAGAACTCCCGCAGGCCCACCTACGTAGTGCGTCCGGAGCAGAGCACTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651776.1
CDS CCA 72 bp TGCCTGTGGCACTCGGCCTCTTCCTCACCCTGCCTCTaGGCCCGCTGCCTCTCCTGCTCAAAGGAGGCAGGT +
Preference number: 6 (lower is better)
Translates to: CLWHSASSSPCL*ARCLSCSKEAG
Trigger: ACCTGCCTCCTTTGAGCAGGAGAGGCAGCGGGCCCAGAGGCAGGGTGAGGAAGAGGCCGAGTGCCACAGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS CCA 72 bp TCCGGTTCTGAGGACGCCGCGGAAGCGGGACGGGATTaGAGTGCTCTGCTCCGGACGCACTACGTAGGTGGG +
Preference number: 6 (lower is better)
Translates to: SGSEDAAEAGRD*SALLRTHYVGG
Trigger: CCCACCTACGTAGTGCGTCCGGAGCAGAGCACTCCAATCCCGTCCCGCTTCCGCGGCGTCCTCAGAACCGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651776.1
CDS CCA 72 bp CGGGGCCAGGGTCCACCCCTTTCTAGCTTTGGCGTCTaGTTGGCTTCCAGGGCAGCCTCCGATCCATCCCGC +
Preference number: 6 (lower is better)
Translates to: RGQGPPLSSFGV*LASRAASDPSR
Trigger: GCGGGATGGATCGGAGGCTGCCCTGGAAGCCAACCAGACGCCAAAGCTAGAAAGGGGTGGACCCTGGCCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651776.1
CDS CAA 72 bp GGCCAGGGTCCACCCCTTTCTAGCTTTGGCGTCTGGTaGGCTTCCAGGGCAGCCTCCGATCCATCCCGCCCG +
Preference number: 6 (lower is better)
Translates to: GQGPPLSSFGVW*ASRAASDPSRP
Trigger: CGGGCGGGATGGATCGGAGGCTGCCCTGGAAGCCAACCAGACGCCAAAGCTAGAAAGGGGTGGACCCTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651776.1
CDS CAA 90 bp GCTATGCGGGGCCAGGGTCCACCCCTTTCTAGCTTTGGCGTCTGGTaGGCTTCCAGGGCAGCCTCCGATCCATCCCGCCCGAGGAGGCAA +
Preference number: 6 (lower is better)
Translates to: AMRGQGPPLSSFGVW*ASRAASDPSRPRRQ
Trigger: TTGCCTCCTCGGGCGGGATGGATCGGAGGCTGCCCTGGAAGCCAACCAGACGCCAAAGCTAGAAAGGGGTGGACCCTGGCCCCGCATAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651776.1
CDS CAA 90 bp TGGCAGCGAGAGCTATGCGGGGCCAGGGTCCACCCCTTTCTAGCTTaGGCGTCTGGTTGGCTTCCAGGGCAGCCTCCGATCCATCCCGCC +
Preference number: 6 (lower is better)
Translates to: WQRELCGARVHPFLA*ASGWLPGQPPIHPA
Trigger: GGCGGGATGGATCGGAGGCTGCCCTGGAAGCCAACCAGACGCCAAAGCTAGAAAGGGGTGGACCCTGGCCCCGCATAGCTCTCGCTGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651776.1
CDS CCA 72 bp TGGCAGCATCACAGGGCCGCTGAGGGTGGCGCAGGTTaGCGGTCCTCAGCAAGAAGGGCTTGTTGCGAGTGG +
Preference number: 6 (lower is better)
Translates to: WQHHRAAEGGAG*RSSARRACCEW
Trigger: CCACTCGCAACAAGCCCTTCTTGCTGAGGACCGCCAACCTGCGCCACCCTCAGCGGCCCTGTGATGCTGCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS CCA 72 bp GGATTGGAGTGCTCTGCTCCGGACGCACTACGTAGGTaGGCCTGCGGGAGTTCTGAGTGCGACGGCGCAGGT +
Preference number: 6 (lower is better)
Translates to: GLECSAPDALRR*ACGSSECDGAG
Trigger: ACCTGCGCCGTCGCACTCAGAACTCCCGCAGGCCCACCTACGTAGTGCGTCCGGAGCAGAGCACTCCAATCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651776.1
CDS CCA 72 bp GCCAGGGTCCACCCCTTTCTAGCTTTGGCGTCTGGTTaGCTTCCAGGGCAGCCTCCGATCCATCCCGCCCGA +
Preference number: 6 (lower is better)
Translates to: ARVHPFLALASG*LPGQPPIHPAR
Trigger: TCGGGCGGGATGGATCGGAGGCTGCCCTGGAAGCCAACCAGACGCCAAAGCTAGAAAGGGGTGGACCCTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651776.1
CDS CAA 90 bp CTGGATCCCTGCCTGCCTTCGGGCCTCGCTGCGCTCCATGATCTCTaGGTAGAGGGGCAGGTAGACATGTGCAGGCACAGGCTGTGCCCG +
Preference number: 6 (lower is better)
Translates to: LDPCLPSGLAALHDL*VEGQVDMCRHRLCP
Trigger: CGGGCACAGCCTGTGCCTGCACATGTCTACCTGCCCCTCTACCAAGAGATCATGGAGCGCAGCGAGGCCCGAAGGCAGGCAGGGATCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS CAA 72 bp GAGCTATGCGGGGCCAGGGTCCACCCCTTTCTAGCTTaGGCGTCTGGTTGGCTTCCAGGGCAGCCTCCGATC +
Preference number: 6 (lower is better)
Translates to: ELCGARVHPFLA*ASGWLPGQPPI
Trigger: GATCGGAGGCTGCCCTGGAAGCCAACCAGACGCCAAAGCTAGAAAGGGGTGGACCCTGGCCCCGCATAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651776.1
CDS GCA 72 bp GCCTGGGAATGTTGGAGGGAAGGTTGTTCAGGGAGCTaGAGCGCCTTGTGGAGCCACACCTCAGAGCCTGCG +
Preference number: 6 (lower is better)
Translates to: AWECWREGCSGS*SALWSHTSEPA
Trigger: CGCAGGCTCTGAGGTGTGGCTCCACAAGGCGCTGCAGCTCCCTGAACAACCTTCCCTCCAACATTCCCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS CCA 72 bp AGCCTGAGGGTGGCTGGGTCTGAGGCCTGGGAATGTTaGAGGGAAGGTTGTTCAGGGAGCTGCAGCGCCTTG +
Preference number: 6 (lower is better)
Translates to: SLRVAGSEAWEC*REGCSGSCSAL
Trigger: CAAGGCGCTGCAGCTCCCTGAACAACCTTCCCTCCAACATTCCCAGGCCTCAGACCCAGCCACCCTCAGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS CAA 72 bp TGTTGGAGGGAAGGTTGTTCAGGGAGCTGCAGCGCCTaGTGGAGCCACACCTCAGAGCCTGCGGGCACTGGA +
Preference number: 6 (lower is better)
Translates to: CWREGCSGSCSA*WSHTSEPAGTG
Trigger: TCCAGTGCCCGCAGGCTCTGAGGTGTGGCTCCACAAGGCGCTGCAGCTCCCTGAACAACCTTCCCTCCAACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS GCA 72 bp GTGGAGCCACACCTCAGAGCCTGCGGGCACTGGACCTaGACCATCCCCCTGTCCTTGTCTTGGAAGAAACTC +
Preference number: 6 (lower is better)
Translates to: VEPHLRACGHWT*TIPLSLSWKKL
Trigger: GAGTTTCTTCCAAGACAAGGACAGGGGGATGGTGCAGGTCCAGTGCCCGCAGGCTCTGAGGTGTGGCTCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS GCA 72 bp CTCCATGATCTCTTGGTAGAGGGGCAGGTAGACATGTaGAGGCACAGGCTGTGCCCGGAACTGCCTGTGGCA +
Preference number: 6 (lower is better)
Translates to: LHDLLVEGQVDM*RHRLCPELPVA
Trigger: TGCCACAGGCAGTTCCGGGCACAGCCTGTGCCTGCACATGTCTACCTGCCCCTCTACCAAGAGATCATGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS GCA 72 bp AGAAGAGAGGAGCAGTTCCTTCCTCTTCTGGATCCCTaGCTGCCTTCGGGCCTCGCTGCGCTCCATGATCTC +
Preference number: 6 (lower is better)
Translates to: RREEQFLPLLDP*LPSGLAALHDL
Trigger: GAGATCATGGAGCGCAGCGAGGCCCGAAGGCAGGCAGGGATCCAGAAGAGGAAGGAACTGCTCCTCTCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS CAA 72 bp TCTATCTCCTCCTCTGGGCTGAGGAACTCGTCAAGTTaGCTGGCCCTGGGCAAAACCAGCCCATCCCCGGAC +
Preference number: 6 (lower is better)
Translates to: SISSSGLRNSSS*LALGKTSPSPD
Trigger: GTCCGGGGATGGGCTGGTTTTGCCCAGGGCCAGCAAACTTGACGAGTTCCTCAGCCCAGAGGAGGAGATAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS CAA 72 bp GCCTGCGGGCACTGGACCTGCACCATCCCCCTGTCCTaGTCTTGGAAGAAACTCTCCAGGTCCTCCTCATCT +
Preference number: 6 (lower is better)
Translates to: ACGHWTCTIPLS*SWKKLSRSSSS
Trigger: AGATGAGGAGGACCTGGAGAGTTTCTTCCAAGACAAGGACAGGGGGATGGTGCAGGTCCAGTGCCCGCAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS CAA 90 bp CACCTCAGAGCCTGCGGGCACTGGACCTGCACCATCCCCCTGTCCTaGTCTTGGAAGAAACTCTCCAGGTCCTCCTCATCTTCAGAGAGG +
Preference number: 6 (lower is better)
Translates to: HLRACGHWTCTIPLS*SWKKLSRSSSSSER
Trigger: CCTCTCTGAAGATGAGGAGGACCTGGAGAGTTTCTTCCAAGACAAGGACAGGGGGATGGTGCAGGTCCAGTGCCCGCAGGCTCTGAGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS GCA 72 bp GGCGCAGGTTGGCGGTCCTCAGCAAGAAGGGCTTGTTaGGAGTGGCCTCTTGGGTTTCTCTTCTTTTGGCTG +
Preference number: 6 (lower is better)
Translates to: GAGWRSSARRAC*EWPLGFLFFWL
Trigger: CAGCCAAAAGAAGAGAAACCCAAGAGGCCACTCGCAACAAGCCCTTCTTGCTGAGGACCGCCAACCTGCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS CAA 72 bp GGGTGGCGCAGGTTGGCGGTCCTCAGCAAGAAGGGCTaGTTGCGAGTGGCCTCTTGGGTTTCTCTTCTTTTG +
Preference number: 6 (lower is better)
Translates to: GWRRLAVLSKKG*LRVASWVSLLL
Trigger: CAAAAGAAGAGAAACCCAAGAGGCCACTCGCAACAAGCCCTTCTTGCTGAGGACCGCCAACCTGCGCCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS CAA 90 bp GAAGTAGAATCTATCTCCTCCTCTGGGCTGAGGAACTCGTCAAGTTaGCTGGCCCTGGGCAAAACCAGCCCATCCCCGGACAGCTCCTCT +
Preference number: 6 (lower is better)
Translates to: EVESISSSGLRNSSS*LALGKTSPSPDSSS
Trigger: AGAGGAGCTGTCCGGGGATGGGCTGGTTTTGCCCAGGGCCAGCAAACTTGACGAGTTCCTCAGCCCAGAGGAGGAGATAGATTCTACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS CAA 90 bp CAGAGCCTGCGGGCACTGGACCTGCACCATCCCCCTGTCCTTGTCTaGGAAGAAACTCTCCAGGTCCTCCTCATCTTCAGAGAGGTTTTC +
Preference number: 6 (lower is better)
Translates to: QSLRALDLHHPPVLV*EETLQVLLIFREVF
Trigger: GAAAACCTCTCTGAAGATGAGGAGGACCTGGAGAGTTTCTTCCAAGACAAGGACAGGGGGATGGTGCAGGTCCAGTGCCCGCAGGCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS TCA 72 bp TTGGCCTATTTTCTCCGCGCATTTTATTTCCGGTTCTaGGGACGCCGCGGAAGCGGGACGGGATTGGAGTGC +
Preference number: 6 (lower is better)
Translates to: LAYFLRAFYFRF*GRRGSGTGLEC
Trigger: GCACTCCAATCCCGTCCCGCTTCCGCGGCGTCCTCAGAACCGGAAATAAAATGCGCGGAGAAAATAGGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651776.1
CDS CAA 72 bp TGGCGCAGGTTGGCGGTCCTCAGCAAGAAGGGCTTGTaGCGAGTGGCCTCTTGGGTTTCTCTTCTTTTGGCT +
Preference number: 6 (lower is better)
Translates to: WRRLAVLSKKGL*RVASWVSLLLA
Trigger: AGCCAAAAGAAGAGAAACCCAAGAGGCCACTCGCAACAAGCCCTTCTTGCTGAGGACCGCCAACCTGCGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS GCA 72 bp AATCTGAAGTTAGTGTGCAGAAACCCAAGCTTTTCCTaGTGGGTTCGGGTGGCTGTGCGGGGCTGTGGGTTA +
Preference number: 6 (lower is better)
Translates to: NLKLVCRNPSFS*WVRVAVRGCGL
Trigger: TAACCCACAGCCCCGCACAGCCACCCGAACCCAGCAGGAAAAGCTTGGGTTTCTGCACACTAACTTCAGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS GCA 72 bp ACAGGATTCACCCGAGGCTGGAATCTGAAGTTAGTGTaGAGAAACCCAAGCTTTTCCTGCTGGGTTCGGGTG +
Preference number: 6 (lower is better)
Translates to: TGFTRGWNLKLV*RNPSFSCWVRV
Trigger: CACCCGAACCCAGCAGGAAAAGCTTGGGTTTCTGCACACTAACTTCAGATTCCAGCCTCGGGTGAATCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS CCA 72 bp CTGGTGACTGATGAGACAGCTCCTCCAGTACTTTCCTaGGGCTTGCAGGCTGTTCTAGAGATCCTTCTAAAC +
Preference number: 6 (lower is better)
Translates to: LVTDETAPPVLS*GLQAVLEILLN
Trigger: GTTTAGAAGGATCTCTAGAACAGCCTGCAAGCCCCAGGAAAGTACTGGAGGAGCTGTCTCATCAGTCACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS CAA 72 bp ACTGATGAGACAGCTCCTCCAGTACTTTCCTGGGGCTaGCAGGCTGTTCTAGAGATCCTTCTAAACCCTGCT +
Preference number: 6 (lower is better)
Translates to: TDETAPPVLSWG*QAVLEILLNPA
Trigger: AGCAGGGTTTAGAAGGATCTCTAGAACAGCCTGCAAGCCCCAGGAAAGTACTGGAGGAGCTGTCTCATCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS CAA 72 bp ACACTTCCTCCAGGCTTTTATGGGGATCCATGGCTTTaGCACGCAAGGTCACAGATTTGGACATTGCTTGAG +
Preference number: 6 (lower is better)
Translates to: TLPPGFYGDPWL*HARSQIWTLLE
Trigger: CTCAAGCAATGTCCAAATCTGTGACCTTGCGTGCAAAAGCCATGGATCCCCATAAAAGCCTGGAGGAAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286544.5
ENST00000556794.5
ENST00000651776.1
CDS GCA 72 bp GGGCTTGCAGGCTGTTCTAGAGATCCTTCTAAACCCTaGTCTGGATCTCTGATGCTGAGTTTTGTAGTTTCT +
Preference number: 6 (lower is better)
Translates to: GLAGCSRDPSKP*SGSLMLSFVVS
Trigger: AGAAACTACAAAACTCAGCATCAGAGATCCAGAGCAGGGTTTAGAAGGATCTCTAGAACAGCCTGCAAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286544.5
ENST00000651776.1
CDS CAA 90 bp GGGATCCATGGCTTTTGCACGCAAGGTCACAGATTTGGACATTGCTaGAGACTTCTTTTTGTGTATCTCCAGCCACTGAATACTCTCATC +
Preference number: 6 (lower is better)
Translates to: GIHGFCTQGHRFGHC*RLLFVYLQPLNTLI
Trigger: GATGAGAGTATTCAGTGGCTGGAGATACACAAAAAGAAGTCTCAAGCAATGTCCAAATCTGTGACCTTGCGTGCAAAAGCCATGGATCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286544.5
ENST00000556794.5
ENST00000651776.1
CDS GCA 72 bp CATGGCTTTTGCACGCAAGGTCACAGATTTGGACATTaGTTGAGACTTCTTTTTGTGTATCTCCAGCCACTG +
Preference number: 6 (lower is better)
Translates to: HGFCTQGHRFGH*LRLLFVYLQPL
Trigger: CAGTGGCTGGAGATACACAAAAAGAAGTCTCAAGCAATGTCCAAATCTGTGACCTTGCGTGCAAAAGCCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286544.5
ENST00000556794.5
ENST00000651776.1
CDS CAA 72 bp CCATGGCTTTTGCACGCAAGGTCACAGATTTGGACATaGCTTGAGACTTCTTTTTGTGTATCTCCAGCCACT +
Preference number: 6 (lower is better)
Translates to: PWLLHARSQIWT*LETSFCVSPAT
Trigger: AGTGGCTGGAGATACACAAAAAGAAGTCTCAAGCAATGTCCAAATCTGTGACCTTGCGTGCAAAAGCCATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286544.5
ENST00000556794.5
ENST00000651776.1
CDS CAA 72 bp TTACGGTCATTGTTCCGGTTCTCTTTCAGCTTTGCTTaGAACACTTCCTCCAGGCTTTTATGGGGATCCATG +
Preference number: 6 (lower is better)
Translates to: LRSLFRFSFSFA*NTSSRLLWGSM
Trigger: CATGGATCCCCATAAAAGCCTGGAGGAAGTGTTCAAAGCAAAGCTGAAAGAGAACCGGAACAATGACCGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286544.5
ENST00000556794.5
ENST00000651776.1
CDS CAA 72 bp CTAGATCCTTGGCAACTTGTTCAAAGAGATAGGGCCTaGTTTGTATTCGCTGCTTCATTTCCTCCAGTTCTT +
Preference number: 6 (lower is better)
Translates to: LDPWQLVQRDRA*FVFAASFPPVL
Trigger: AAGAACTGGAGGAAATGAAGCAGCGAATACAAACAAGGCCCTATCTCTTTGAACAAGTTGCCAAGGATCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286544.5
ENST00000556794.5
ENST00000651776.1
CDS CAA 72 bp ATCCTTGGCAACTTGTTCAAAGAGATAGGGCCTTGTTaGTATTCGCTGCTTCATTTCCTCCAGTTCTTTCTT +
Preference number: 6 (lower is better)
Translates to: ILGNLFKEIGPC*YSLLHFLQFFL
Trigger: AAGAAAGAACTGGAGGAAATGAAGCAGCGAATACAAACAAGGCCCTATCTCTTTGAACAAGTTGCCAAGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286544.5
ENST00000556794.5
ENST00000651776.1