RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM161A (Homo sapiens)

Ensembl gene IDs: ENSG00000170264

Ensembl transcript IDs: ENST00000307507.3, ENST00000404929.6, ENST00000405894.3, ENST00000418113.5, ENST00000456262.5

Found 329 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTTCGCTCTTTCTTACGGCTTGTTCTCGTCCTCTGGAAGATACCGTaGGCACGGGAGGGTTGCAGTTACAAGGCACAGGGTTTACACCTG +
Preference number: 1 (lower is better)
Translates to: FRSFLRLVLVLWKIP*AREGCSYKAQGLHL
Trigger: CAGGTGTAAACCCTGTGCCTTGTAACTGCAACCCTCCCGTGCCCACGGTATCTTCCAGAGGACGAGAACAAGCCGTAAGAAAGAGCGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
3UTR TCA 90 bp TATCAGAAGCGTCCCCACAGATGTTCTAAACACAAATGCGGCTGCTaGCACCCTGACGCTGCAAACAACAGCAAGGGCATAGAGAGGAGA +
Preference number: 1 (lower is better)
Translates to: YQKRPHRCSKHKCGC*HPDAANNSKGIERR
Trigger: TCTCCTCTCTATGCCCTTGCTGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAGAACATCTGTGGGGACGCTTCTGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
3UTR CCA 90 bp AGTCCTCATAGCTTATCGGTGCATGTTCATCCACCCCAGAAAAGCTaGTGTTCAAATCAGCTCCTTTCTGTTAGCCCTCTGACTGCTTCC +
Preference number: 1 (lower is better)
Translates to: SPHSLSVHVHPPQKS*CSNQLLSVSPLTAS
Trigger: GGAAGCAGTCAGAGGGCTAACAGAAAGGAGCTGATTTGAACACCAGCTTTTCTGGGGTGGATGAACATGCACCGATAAGCTATGAGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307507.3
3UTR GCA 90 bp GTGGTGAATATCAGGAAAGTTCACAAAGTCCTCATAGCTTATCGGTaGATGTTCATCCACCCCAGAAAAGCTGGTGTTCAAATCAGCTCC +
Preference number: 1 (lower is better)
Translates to: VVNIRKVHKVLIAYR*MFIHPRKAGVQISS
Trigger: GGAGCTGATTTGAACACCAGCTTTTCTGGGGTGGATGAACATGCACCGATAAGCTATGAGGACTTTGTGAACTTTCCTGATATTCACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307507.3
3UTR CCA 90 bp GAGGTGTTTCTGGTATCTCTCAGGAAGGTCCTCAAAATCAGGAGTTaGGCACCTAACCTTGTGTTTACACTTCAACTTTACAGCCTGTTC +
Preference number: 1 (lower is better)
Translates to: EVFLVSLRKVLKIRS*APNLVFTLQLYSLF
Trigger: GAACAGGCTGTAAAGTTGAAGTGTAAACACAAGGTTAGGTGCCCAACTCCTGATTTTGAGGACCTTCCTGAGAGATACCAGAAACACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
3UTR CCA 90 bp CACACTGTTAAGAGTTTTGGAGACTTGTGTTCTGAGAGGTGTTTCTaGTATCTCTCAGGAAGGTCCTCAAAATCAGGAGTTGGGCACCTA +
Preference number: 1 (lower is better)
Translates to: HTVKSFGDLCSERCF*YLSGRSSKSGVGHL
Trigger: TAGGTGCCCAACTCCTGATTTTGAGGACCTTCCTGAGAGATACCAGAAACACCTCTCAGAACACAAGTCTCCAAAACTCTTAACAGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
3UTR CCA 90 bp CTAAATCATGGTAAAGGGGGAGAAAGACAGATGCAGGAACTGGATTaGCTCGGAATTTCTTCTTATACTCTGGATCCTCTTCTTGTTTTT +
Preference number: 1 (lower is better)
Translates to: LNHGKGGERQMQELD*LGISSYTLDPLLVF
Trigger: AAAAACAAGAAGAGGATCCAGAGTATAAGAAGAAATTCCGAGCCAATCCAGTTCCTGCATCTGTCTTTCTCCCCCTTTACCATGATTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
3UTR CAA 90 bp ACGGCTTGTTCTCGTCCTCTGGAAGATACCGTGGGCACGGGAGGGTaGCAGTTACAAGGCACAGGGTTTACACCTGCACATCTTACTGGT +
Preference number: 2 (lower is better)
Translates to: TACSRPLEDTVGTGG*QLQGTGFTPAHLTG
Trigger: ACCAGTAAGATGTGCAGGTGTAAACCCTGTGCCTTGTAACTGCAACCCTCCCGTGCCCACGGTATCTTCCAGAGGACGAGAACAAGCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
3UTR-3UTR GCA 90 bp CGGGAGGGTTGCAGTTACAAGGCACAGGGTTTACACCTGCACATCTTACTGGTGGGGGAGAAAGACAGATaGAGGAACTGGATTGGCTCG +
Preference number: 2 (lower is better)
Translates to: REGCSYKAQGLHLHILLVGEKDR*RNWIGS
Trigger: CGAGCCAATCCAGTTCCTGCATCTGTCTTTCTCCCC...CACCAGTAAGATGTGCAGGTGTAAACCCTGTGCCTTGTAACTGCAACCCTCCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
3UTR-3UTR GCA 90 bp TTACAAGGCACAGGGTTTACACCTGCACATCTTACTGGTGACTTACGCCTTGGAAGAAAGTCTCTCAGCTaGTTTTCCCGGGCTGCTCGC +
Preference number: 2 (lower is better)
Translates to: LQGTGFTPAHLTGDLRLGRKSLS*FSRAAR
Trigger: GCGAGCAGCCCGGGAAAAGCAGCTGAGAGACTTTCT...TCCAAGGCGTAAGTCACCAGTAAGATGTGCAGGTGTAAACCCTGTGCCTTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
3UTR-3UTR GCA 90 bp TTACAAGGCACAGGGTTTACACCTGCACATCTTACTGGTGACTTACGCCTTGGAGACACCTGGGGTTCCTaGATCCACAAGCTGACCTAC +
Preference number: 2 (lower is better)
Translates to: LQGTGFTPAHLTGDLRLGDTWGS*IHKLTY
Trigger: GTAGGTCAGCTTGTGGATGCAGGAACCCCAGGTGTC...TCCAAGGCGTAAGTCACCAGTAAGATGTGCAGGTGTAAACCCTGTGCCTTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
3UTR-3UTR TCA 90 bp GCTACAGATGACTTTGATCAACAGCCCTGCACATATCAGAAGCGTCCCCACAGAAGCTTCCCGAATAGCTaGGATTACAGGTGTGCACCA +
Preference number: 2 (lower is better)
Translates to: ATDDFDQQPCTYQKRPHRSFPNS*DYRCAP
Trigger: TGGTGCACACCTGTAATCTCAGCTATTCGGGAAGCT...TCTGTGGGGACGCTTCTGATATGTGCAGGGCTGTTGATCAAAGTCATCTGTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418113.5
3UTR-3UTR GCA 90 bp ATGCTCCTGGGCTCTCAGCTGTGTCCTAAGGTTTCGATAGAGCTCTTCTTCTTTGGGGAGAAAGACAGATaGAGGAACTGGATTGGCTCG +
Preference number: 2 (lower is better)
Translates to: MLLGSQLCPKVSIELFFFGEKDR*RNWIGS
Trigger: CGAGCCAATCCAGTTCCTGCATCTGTCTTTCTCCCC...AAAGAAGAAGAGCTCTATCGAAACCTTAGGACACAGCTGAGAGCCCAGGAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
3UTR-3UTR GCA 90 bp ACAGATGTTCTAAACACAAATGCGGCTGCTGACACCCTGACGCTGCAAACAACATTCATGCCATTCTCCTaGCTCTGCCTCCCAAGTAGC +
Preference number: 2 (lower is better)
Translates to: TDVLNTNAAADTLTLQTTFMPFS*LCLPSS
Trigger: GCTACTTGGGAGGCAGAGGCAGGAGAATGGCATGAA...TGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAGAACATCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
3UTR-3UTR GCA 90 bp AGGGGGAGAAAGACAGATGCAGGAACTGGATTGGCTCGGAATTTCTTCTTATACGCTCACTGCAAGCTCTaGCTCCTGGGTTCATGCCAT +
Preference number: 2 (lower is better)
Translates to: RGRKTDAGTGLARNFFLYAHCKL*LLGSCH
Trigger: ATGGCATGAACCCAGGAGGCAGAGCTTGCAGTGAGC...GTATAAGAAGAAATTCCGAGCCAATCCAGTTCCTGCATCTGTCTTTCTCCCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456262.5
3UTR-3UTR TCA 90 bp AATAGGCAAAGCCTTACTCTAACTGATCAAATGACCAATCAGCTGGATTCAGGCCGGCTGCTGACACCCTaGCGCTGCAAACAACAGCAA +
Preference number: 2 (lower is better)
Translates to: NRQSLTLTDQMTNQLDSGRLLTP*RCKQQQ
Trigger: TTGCTGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCG...GCCTGAATCCAGCTGATTGGTCATTTGATCAGTTAGAGTAAGGCTTTGCCTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
3UTR-3UTR TCA 90 bp AAACAACAGCAAGGGCATAGAGAGGAGACCTTGATGATTCAGTGTGATTCTTCACACAAATGCGGCTGCTaGCACCCTGACGCTGCAAAC +
Preference number: 2 (lower is better)
Translates to: KQQQGHREETLMIQCDSSHKCGC*HPDAAN
Trigger: GTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTG...TGAAGAATCACACTGAATCATCAAGGTCTCCTCTCTATGCCCTTGCTGTTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418113.5
ENST00000456262.5
3UTR-3UTR GCA 90 bp GCTACAGATGACTTTGATCAACAGCCCTGCACATATCAGAAGCGTCCCCACAGATTTGATCAACAGCCCTaGACATATCAGAAGCGTCCC +
Preference number: 2 (lower is better)
Translates to: ATDDFDQQPCTYQKRPHRFDQQP*TYQKRP
Trigger: GGGACGCTTCTGATATGTGCAGGGCTGTTGATCAAA...TCTGTGGGGACGCTTCTGATATGTGCAGGGCTGTTGATCAAAGTCATCTGTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
3UTR-3UTR GCA 90 bp ACAGATGTTCTAAACACAAATGCGGCTGCTGACACCCTGACGCTGCAAACAACATACCTCCTGGGTTCATaGAATTCTCGTGCCTCAGCT +
Preference number: 2 (lower is better)
Translates to: TDVLNTNAAADTLTLQTTYLLGS*NSRASA
Trigger: AGCTGAGGCACGAGAATTGCATGAACCCAGGAGGTA...TGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAGAACATCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418113.5
3UTR-3UTR CCA 90 bp ACGGGAGGGTTGCAGTTACAAGGCACAGGGTTTACACCTGCACATCTTACTGGTGACAGATGCAGGAACTaGATTGGCTCGGAATTTCTT +
Preference number: 2 (lower is better)
Translates to: TGGLQLQGTGFTPAHLTGDRCRN*IGSEFL
Trigger: AAGAAATTCCGAGCCAATCCAGTTCCTGCATCTGTC...ACCAGTAAGATGTGCAGGTGTAAACCCTGTGCCTTGTAACTGCAACCCTCCCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
3UTR CAA 90 bp TATCTCTCAGGAAGGTCCTCAAAATCAGGAGTTGGGCACCTAACCTaGTGTTTACACTTCAACTTTACAGCCTGTTCAGGACACCTGGGG +
Preference number: 2 (lower is better)
Translates to: YLSGRSSKSGVGHLT*CLHFNFTACSGHLG
Trigger: CCCCAGGTGTCCTGAACAGGCTGTAAAGTTGAAGTGTAAACACAAGGTTAGGTGCCCAACTCCTGATTTTGAGGACCTTCCTGAGAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
3UTR-3UTR TCA 90 bp CGGGAGGGTTGCAGTTACAAGGCACAGGGTTTACACCTGCACATCTTACTGGTGTCCTCATTAGAGTGGTaGATATCAGGAAAGTTCACA +
Preference number: 2 (lower is better)
Translates to: REGCSYKAQGLHLHILLVSSLEW*ISGKFT
Trigger: TGTGAACTTTCCTGATATTCACCACTCTAATGAGGA...CACCAGTAAGATGTGCAGGTGTAAACCCTGTGCCTTGTAACTGCAACCCTCCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307507.3
3UTR-3UTR GCA 90 bp ATACCGTGGGCACGGGAGGGTTGCAGTTACAAGGCACAGGGTTTACACCTGCACTGTCTGAATCCAGTATaGAGTTTTCACTCGAAAAAT +
Preference number: 2 (lower is better)
Translates to: IPWAREGCSYKAQGLHLHCLNPV*SFHSKN
Trigger: ATTTTTCGAGTGAAAACTGCATACTGGATTCAGACA...GTGCAGGTGTAAACCCTGTGCCTTGTAACTGCAACCCTCCCGTGCCCACGGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307507.3
3UTR-3UTR GCA 90 bp GCACAGGGTTTACACCTGCACATCTTACTGGTGACTTACGCCTTGGAGACAAATTTTGATCAACAGCCCTaGACATATCAGAAGCGTCCC +
Preference number: 2 (lower is better)
Translates to: AQGLHLHILLVTYALETNFDQQP*TYQKRP
Trigger: GGGACGCTTCTGATATGTGCAGGGCTGTTGATCAAA...ATTTGTCTCCAAGGCGTAAGTCACCAGTAAGATGTGCAGGTGTAAACCCTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456262.5
3UTR-3UTR GCA 90 bp AAACAACAGCAAGGGCATAGAGAGGAGACCTTGATGATTCAGTGTGATTCTTCATGTTGCTCAGGCTGGTaGGGTGGCACAATCTCAGCT +
Preference number: 2 (lower is better)
Translates to: KQQQGHREETLMIQCDSSCCSGW*GGTISA
Trigger: AGCTGAGATTGTGCCACCGCACCAGCCTGAGCAACA...TGAAGAATCACACTGAATCATCAAGGTCTCCTCTCTATGCCCTTGCTGTTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418113.5
3UTR-3UTR CCA 90 bp CGGGAGGGTTGCAGTTACAAGGCACAGGGTTTACACCTGCACATCTTACTGGTGAAAAATCAACAGAATTaGCCAGGCACAGTGGTTCAT +
Preference number: 2 (lower is better)
Translates to: REGCSYKAQGLHLHILLVKNQQN*PGTVVH
Trigger: ATGAACCACTGTGCCTGGCCAATTCTGTTGATTTTT...CACCAGTAAGATGTGCAGGTGTAAACCCTGTGCCTTGTAACTGCAACCCTCCCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307507.3
3UTR-3UTR TCA 90 bp ACGGGAGGGTTGCAGTTACAAGGCACAGGGTTTACACCTGCACATCTTACTGGTAAGCCTTACTCTAACTaGTCAAATGACCAATCAGCT +
Preference number: 2 (lower is better)
Translates to: TGGLQLQGTGFTPAHLTGKPYSN*SNDQSA
Trigger: AGCTGATTGGTCATTTGATCAGTTAGAGTAAGGCTT...ACCAGTAAGATGTGCAGGTGTAAACCCTGTGCCTTGTAACTGCAACCCTCCCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456262.5
3UTR-3UTR CCA 90 bp ACGGGAGGGTTGCAGTTACAAGGCACAGGGTTTACACCTGCACATCTTACTGGTATGCAGGAACTGGATTaGCTCGGAATTTCTTCTTAT +
Preference number: 2 (lower is better)
Translates to: TGGLQLQGTGFTPAHLTGMQELD*LGISSY
Trigger: ATAAGAAGAAATTCCGAGCCAATCCAGTTCCTGCAT...ACCAGTAAGATGTGCAGGTGTAAACCCTGTGCCTTGTAACTGCAACCCTCCCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
3UTR-3UTR TCA 90 bp CAAGGCACAGGGTTTACACCTGCACATCTTACTGGTGACTTACGCCTTGGAGACTTTCTTTGTCTTCAGTaGCACTTTTCGTCTCTTGAT +
Preference number: 2 (lower is better)
Translates to: QGTGFTPAHLTGDLRLGDFLCLQ*HFSSLD
Trigger: ATCAAGAGACGAAAAGTGTCACTGAAGACAAAGAAA...GTCTCCAAGGCGTAAGTCACCAGTAAGATGTGCAGGTGTAAACCCTGTGCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456262.5
3UTR-3UTR TCA 90 bp CAAGGCACAGGGTTTACACCTGCACATCTTACTGGTGACTTACGCCTTGGAGACCTTGATGATTCAGTGTaGTTCTTCAACAGATTTCTC +
Preference number: 2 (lower is better)
Translates to: QGTGFTPAHLTGDLRLGDLDDSV*FFNRFL
Trigger: GAGAAATCTGTTGAAGAATCACACTGAATCATCAAG...GTCTCCAAGGCGTAAGTCACCAGTAAGATGTGCAGGTGTAAACCCTGTGCCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456262.5
3UTR-3UTR GCA 90 bp CGGGAGGGTTGCAGTTACAAGGCACAGGGTTTACACCTGCACATCTTACTGGTGTTCTCTTTTAATAGATaGATGTGGAGATGCATGAAG +
Preference number: 2 (lower is better)
Translates to: REGCSYKAQGLHLHILLVFSFNR*MWRCMK
Trigger: CTTCATGCATCTCCACATGCATCTATTAAAAGAGAA...CACCAGTAAGATGTGCAGGTGTAAACCCTGTGCCTTGTAACTGCAACCCTCCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
3UTR-3UTR TCA 90 bp GAATTACTTTGGAGACTTGCCCTAGCCAAGTTATTATGCACAATTTCATCATATCGGCTGCTGACACCCTaGCGCTGCAAACAACAGCAA +
Preference number: 2 (lower is better)
Translates to: ELLWRLALAKLLCTISSYRLLTP*RCKQQQ
Trigger: TTGCTGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCG...ATATGATGAAATTGTGCATAATAACTTGGCTAGGGCAAGTCTCCAAAGTAATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
3UTR-3UTR TCA 90 bp GAATTACTTTGGAGACTTGCCCTAGCCAAGTTATTATGCACAATTTCATCATATCACAAATGCGGCTGCTaGCACCCTGACGCTGCAAAC +
Preference number: 2 (lower is better)
Translates to: ELLWRLALAKLLCTISSYHKCGC*HPDAAN
Trigger: GTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTG...ATATGATGAAATTGTGCATAATAACTTGGCTAGGGCAAGTCTCCAAAGTAATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
3UTR-3UTR TCA 90 bp ACAGATGTTCTAAACACAAATGCGGCTGCTGACACCCTGACGCTGCAAACAACAAAGCCTTACTCTAACTaGTCAAATGACCAATCAGCT +
Preference number: 2 (lower is better)
Translates to: TDVLNTNAAADTLTLQTTKPYSN*SNDQSA
Trigger: AGCTGATTGGTCATTTGATCAGTTAGAGTAAGGCTT...TGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAGAACATCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
3UTR-3UTR TCA 90 bp ACAGATGTTCTAAACACAAATGCGGCTGCTGACACCCTGACGCTGCAAACAACAGTAAACATTTGCCCCTaGTGGAGAAAAATGACCTTA +
Preference number: 2 (lower is better)
Translates to: TDVLNTNAAADTLTLQTTVNICP*WRKMTL
Trigger: TAAGGTCATTTTTCTCCATCAGGGGCAAATGTTTAC...TGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAGAACATCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
3UTR-3UTR GCA 90 bp TCTTTTAATAGATGCATGTGGAGATGCATGAAGATCAAATGGTTTACACACTGTCTGCTTTTCCCGGGCTaGTCGCTTCTGTTCCTCCCT +
Preference number: 2 (lower is better)
Translates to: SFNRCMWRCMKIKWFTHCLLFPG*SLLFLP
Trigger: AGGGAGGAACAGAAGCGAGCAGCCCGGGAAAAGCAG...ACAGTGTGTAAACCATTTGATCTTCATGCATCTCCACATGCATCTATTAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
3UTR-3UTR GCA 90 bp AATAGGCAAAGCCTTACTCTAACTGATCAAATGACCAATCAGCTGGATTCAGGCTTTGATCAACAGCCCTaGACATATCAGAAGCGTCCC +
Preference number: 2 (lower is better)
Translates to: NRQSLTLTDQMTNQLDSGFDQQP*TYQKRP
Trigger: GGGACGCTTCTGATATGTGCAGGGCTGTTGATCAAA...GCCTGAATCCAGCTGATTGGTCATTTGATCAGTTAGAGTAAGGCTTTGCCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
3UTR-3UTR GCA 90 bp ACAGATGTTCTAAACACAAATGCGGCTGCTGACACCCTGACGCTGCAAACAACATTCTGTGAAATGCACTaGAGAGAAAAAGAATGGGCA +
Preference number: 2 (lower is better)
Translates to: TDVLNTNAAADTLTLQTTFCEMH*REKEWA
Trigger: TGCCCATTCTTTTTCTCTGCAGTGCATTTCACAGAA...TGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAGAACATCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
3UTR-3UTR GCA 90 bp GCACAGGGTTTACACCTGCACATCTTACTGGTGACTTACGCCTTGGAGACAAATTTCTGTGAAATGCACTaGAGAGAAAAAGAATGGGCA +
Preference number: 2 (lower is better)
Translates to: AQGLHLHILLVTYALETNFCEMH*REKEWA
Trigger: TGCCCATTCTTTTTCTCTGCAGTGCATTTCACAGAA...ATTTGTCTCCAAGGCGTAAGTCACCAGTAAGATGTGCAGGTGTAAACCCTGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456262.5
3UTR-3UTR GCA 90 bp AATAGGCAAAGCCTTACTCTAACTGATCAAATGACCAATCAGCTGGATTCAGGCTTCATGCAATTCTCGTaGCTCAGCTTCCCGAATAGC +
Preference number: 2 (lower is better)
Translates to: NRQSLTLTDQMTNQLDSGFMQFS*LSFPNS
Trigger: GCTATTCGGGAAGCTGAGGCACGAGAATTGCATGAA...GCCTGAATCCAGCTGATTGGTCATTTGATCAGTTAGAGTAAGGCTTTGCCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418113.5
3UTR-3UTR CCA 90 bp ACAGATGTTCTAAACACAAATGCGGCTGCTGACACCCTGACGCTGCAAACAACAAAATCTGAATTACTTTaGAGACTTGCCCTAGCCAAG +
Preference number: 2 (lower is better)
Translates to: TDVLNTNAAADTLTLQTTKSELL*RLALAK
Trigger: CTTGGCTAGGGCAAGTCTCCAAAGTAATTCAGATTT...TGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAGAACATCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
3UTR-3UTR CCA 90 bp AATAGGCAAAGCCTTACTCTAACTGATCAAATGACCAATCAGCTGGATTCAGGCGCAACTTCTACCTCCTaGGTTCATGCAATTCTCGTG +
Preference number: 2 (lower is better)
Translates to: NRQSLTLTDQMTNQLDSGATSTS*VHAILV
Trigger: CACGAGAATTGCATGAACCCAGGAGGTAGAAGTTGC...GCCTGAATCCAGCTGATTGGTCATTTGATCAGTTAGAGTAAGGCTTTGCCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418113.5
3UTR-3UTR CCA 90 bp GAATTACTTTGGAGACTTGCCCTAGCCAAGTTATTATGCACAATTTCATCATATCTCAGGCTGGTGCGGTaGCACAATCTCAGCTCACTG +
Preference number: 2 (lower is better)
Translates to: ELLWRLALAKLLCTISSYLRLVR*HNLSSL
Trigger: CAGTGAGCTGAGATTGTGCCACCGCACCAGCCTGAG...ATATGATGAAATTGTGCATAATAACTTGGCTAGGGCAAGTCTCCAAAGTAATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418113.5
3UTR-3UTR TCA 90 bp ACAGATGTTCTAAACACAAATGCGGCTGCTGACACCCTGACGCTGCAAACAACATTTCTTTGTCTTCAGTaGCACTTTTCGTCTCTTGAT +
Preference number: 2 (lower is better)
Translates to: TDVLNTNAAADTLTLQTTFLCLQ*HFSSLD
Trigger: ATCAAGAGACGAAAAGTGTCACTGAAGACAAAGAAA...TGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAGAACATCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418113.5
ENST00000456262.5
3UTR-3UTR GCA 90 bp GAATTACTTTGGAGACTTGCCCTAGCCAAGTTATTATGCACAATTTCATCATATGCTCACTGCAAGCTCTaGCTCCTGGGTTCATGCCAT +
Preference number: 2 (lower is better)
Translates to: ELLWRLALAKLLCTISSYAHCKL*LLGSCH
Trigger: ATGGCATGAACCCAGGAGGCAGAGCTTGCAGTGAGC...ATATGATGAAATTGTGCATAATAACTTGGCTAGGGCAAGTCTCCAAAGTAATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
3UTR-3UTR GCA 90 bp ACAGATGTTCTAAACACAAATGCGGCTGCTGACACCCTGACGCTGCAAACAACAATTACTTTGGAGACTTaGCCTAGCCAAGTTATTATG +
Preference number: 2 (lower is better)
Translates to: TDVLNTNAAADTLTLQTTITLET*PSQVIM
Trigger: CATAATAACTTGGCTAGGGCAAGTCTCCAAAGTAAT...TGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAGAACATCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
3UTR-3UTR GCA 90 bp AAACAACAGCAAGGGCATAGAGAGGAGACCTTGATGATTCAGTGTGATTCTTCAAGGTGTGCACCACCATaGCTGGCTAATTTTCTGTAT +
Preference number: 2 (lower is better)
Translates to: KQQQGHREETLMIQCDSSRCAPP*LANFLY
Trigger: ATACAGAAAATTAGCCAGGCATGGTGGTGCACACCT...TGAAGAATCACACTGAATCATCAAGGTCTCCTCTCTATGCCCTTGCTGTTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418113.5
3UTR-3UTR GCA 90 bp GAATTACTTTGGAGACTTGCCCTAGCCAAGTTATTATGCACAATTTCATCATATTTCATGCCATTCTCCTaGCTCTGCCTCCCAAGTAGC +
Preference number: 2 (lower is better)
Translates to: ELLWRLALAKLLCTISSYFMPFS*LCLPSS
Trigger: GCTACTTGGGAGGCAGAGGCAGGAGAATGGCATGAA...ATATGATGAAATTGTGCATAATAACTTGGCTAGGGCAAGTCTCCAAAGTAATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
3UTR CAA 90 bp GTGGAGATGCATGAAGATCAAATGGTTTACACACTGTTAAGAGTTTaGGAGACTTGTGTTCTGAGAGGTGTTTCTGGTATCTCTCAGGAA +
Preference number: 2 (lower is better)
Translates to: VEMHEDQMVYTLLRV*ETCVLRGVSGISQE
Trigger: TTCCTGAGAGATACCAGAAACACCTCTCAGAACACAAGTCTCCAAAACTCTTAACAGTGTGTAAACCATTTGATCTTCATGCATCTCCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
3UTR CAA 90 bp AAGGCACAGGGTTTACACCTGCACATCTTACTGGTGACTTACGCCTaGGAGACAAATAAGGCCAACGTGTTTCTTTTAAATTTTCTTCAT +
Preference number: 2 (lower is better)
Translates to: KAQGLHLHILLVTYA*ETNKANVFLLNFLH
Trigger: ATGAAGAAAATTTAAAAGAAACACGTTGGCCTTATTTGTCTCCAAGGCGTAAGTCACCAGTAAGATGTGCAGGTGTAAACCCTGTGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
3UTR-3UTR TCA 90 bp AATAGGCAAAGCCTTACTCTAACTGATCAAATGACCAATCAGCTGGATTCAGGCAAGCCTTACTCTAACTaGTCAAATGACCAATCAGCT +
Preference number: 2 (lower is better)
Translates to: NRQSLTLTDQMTNQLDSGKPYSN*SNDQSA
Trigger: AGCTGATTGGTCATTTGATCAGTTAGAGTAAGGCTT...GCCTGAATCCAGCTGATTGGTCATTTGATCAGTTAGAGTAAGGCTTTGCCTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
3UTR-3UTR GCA 90 bp AATAGGCAAAGCCTTACTCTAACTGATCAAATGACCAATCAGCTGGATTCAGGCTTCTGTGAAATGCACTaGAGAGAAAAAGAATGGGCA +
Preference number: 2 (lower is better)
Translates to: NRQSLTLTDQMTNQLDSGFCEMH*REKEWA
Trigger: TGCCCATTCTTTTTCTCTGCAGTGCATTTCACAGAA...GCCTGAATCCAGCTGATTGGTCATTTGATCAGTTAGAGTAAGGCTTTGCCTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
3UTR-3UTR GCA 90 bp AATAGGCAAAGCCTTACTCTAACTGATCAAATGACCAATCAGCTGGATTCAGGCTTCTGCTGCCATTCTTaGATTTTTCTGAGCAACTCT +
Preference number: 2 (lower is better)
Translates to: NRQSLTLTDQMTNQLDSGFCCHS*IFLSNS
Trigger: AGAGTTGCTCAGAAAAATGCAAGAATGGCAGCAGAA...GCCTGAATCCAGCTGATTGGTCATTTGATCAGTTAGAGTAAGGCTTTGCCTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418113.5
ENST00000456262.5
3UTR-3UTR GCA 90 bp GAATTACTTTGGAGACTTGCCCTAGCCAAGTTATTATGCACAATTTCATCATATACAATCTCAGCTCACTaGAACTTCTACCTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: ELLWRLALAKLLCTISSYTISAH*NFYLLG
Trigger: ACCCAGGAGGTAGAAGTTGCAGTGAGCTGAGATTGT...ATATGATGAAATTGTGCATAATAACTTGGCTAGGGCAAGTCTCCAAAGTAATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418113.5
3UTR-3UTR TCA 90 bp TCTTTTAATAGATGCATGTGGAGATGCATGAAGATCAAATGGTTTACACACTGTTGGAGACTTGTGTTCTaGGAGGTGTTTCTGGTATCT +
Preference number: 2 (lower is better)
Translates to: SFNRCMWRCMKIKWFTHCWRLVF*EVFLVS
Trigger: AGATACCAGAAACACCTCTCAGAACACAAGTCTCCA...ACAGTGTGTAAACCATTTGATCTTCATGCATCTCCACATGCATCTATTAAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
3UTR-3UTR CCA 90 bp GAATTACTTTGGAGACTTGCCCTAGCCAAGTTATTATGCACAATTTCATCATATACTCTTTTTCTAGGTTaGGTAACTCCTCTTCAGAGG +
Preference number: 2 (lower is better)
Translates to: ELLWRLALAKLLCTISSYTLFLG*VTPLQR
Trigger: CCTCTGAAGAGGAGTTACCCAACCTAGAAAAAGAGT...ATATGATGAAATTGTGCATAATAACTTGGCTAGGGCAAGTCTCCAAAGTAATTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456262.5
3UTR-3UTR TCA 90 bp TCTTTTAATAGATGCATGTGGAGATGCATGAAGATCAAATGGTTTACACACTGTTCTCTTATCATCATTTaGAAAGGCTCCGGTACTGTA +
Preference number: 2 (lower is better)
Translates to: SFNRCMWRCMKIKWFTHCSLIII*KGSGTV
Trigger: TACAGTACCGGAGCCTTTTCAAATGATGATAAGAGA...ACAGTGTGTAAACCATTTGATCTTCATGCATCTCCACATGCATCTATTAAAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
3UTR-3UTR CCA 90 bp TCTTTTAATAGATGCATGTGGAGATGCATGAAGATCAAATGGTTTACACACTGTATGCAGGAACTGGATTaGCTCGGAATTTCTTCTTAT +
Preference number: 2 (lower is better)
Translates to: SFNRCMWRCMKIKWFTHCMQELD*LGISSY
Trigger: ATAAGAAGAAATTCCGAGCCAATCCAGTTCCTGCAT...ACAGTGTGTAAACCATTTGATCTTCATGCATCTCCACATGCATCTATTAAAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
3UTR-3UTR CCA 90 bp GAATTACTTTGGAGACTTGCCCTAGCCAAGTTATTATGCACAATTTCATCATATAAATCTGAATTACTTTaGAGACTTGCCCTAGCCAAG +
Preference number: 2 (lower is better)
Translates to: ELLWRLALAKLLCTISSYKSELL*RLALAK
Trigger: CTTGGCTAGGGCAAGTCTCCAAAGTAATTCAGATTT...ATATGATGAAATTGTGCATAATAACTTGGCTAGGGCAAGTCTCCAAAGTAATTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
3UTR CCA 72 bp TTCTTACGGCTTGTTCTCGTCCTCTGGAAGATACCGTaGGCACGGGAGGGTTGCAGTTACAAGGCACAGGGT +
Preference number: 3 (lower is better)
Translates to: FLRLVLVLWKIP*AREGCSYKAQG
Trigger: ACCCTGTGCCTTGTAACTGCAACCCTCCCGTGCCCACGGTATCTTCCAGAGGACGAGAACAAGCCGTAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
3UTR CCA 72 bp CCTTTTCGCTCTTTCTTACGGCTTGTTCTCGTCCTCTaGAAGATACCGTGGGCACGGGAGGGTTGCAGTTAC +
Preference number: 3 (lower is better)
Translates to: PFRSFLRLVLVL*KIPWAREGCSY
Trigger: GTAACTGCAACCCTCCCGTGCCCACGGTATCTTCCAGAGGACGAGAACAAGCCGTAAGAAAGAGCGAAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
3UTR-3UTR CAA 90 bp GAAGATACCGTGGGCACGGGAGGGTTGCAGTTACAAGGCACAGGGTTTACACCTCTGGTGACTTACGCCTaGGAGACAAATAAGGCCAAC +
Preference number: 3 (lower is better)
Translates to: EDTVGTGGLQLQGTGFTPLVTYA*ETNKAN
Trigger: GTTGGCCTTATTTGTCTCCAAGGCGTAAGTCACCAG...AGGTGTAAACCCTGTGCCTTGTAACTGCAACCCTCCCGTGCCCACGGTATCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
3UTR TCA 72 bp CGTCCCCACAGATGTTCTAAACACAAATGCGGCTGCTaGCACCCTGACGCTGCAAACAACAGCAAGGGCATA +
Preference number: 3 (lower is better)
Translates to: RPHRCSKHKCGC*HPDAANNSKGI
Trigger: TATGCCCTTGCTGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAGAACATCTGTGGGGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
3UTR TCA 72 bp GCTGGTGTTCAAATCAGCTCCTTTCTGTTAGCCCTCTaGCTGCTTCCTGTCGGCTTGTGTCAGTCTAGCAAC +
Preference number: 3 (lower is better)
Translates to: AGVQISSFLLAL*LLPVGLCQSSN
Trigger: GTTGCTAGACTGACACAAGCCGACAGGAAGCAGTCAGAGGGCTAACAGAAAGGAGCTGATTTGAACACCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307507.3
3UTR GCA 72 bp GCTGACCTACAAGGCAGAGGAGATGAGTTCTGTAAATaGTCCTGGGCTCTCAGCTGTGTCCTAAGGTTTCGA +
Preference number: 3 (lower is better)
Translates to: ADLQGRGDEFCK*SWALSCVLRFR
Trigger: TCGAAACCTTAGGACACAGCTGAGAGCCCAGGAGCATTTACAGAACTCATCTCCTCTGCCTTGTAGGTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
3UTR-3UTR CAA 90 bp AAACAACAGCAAGGGCATAGAGAGGAGACCTTGATGATTCAGTGTGATTCTTCATGGAGTCTCATTCTGTaGCTCAGGCTGGTGCGGTGG +
Preference number: 3 (lower is better)
Translates to: KQQQGHREETLMIQCDSSWSLIL*LRLVRW
Trigger: CCACCGCACCAGCCTGAGCAACAGAATGAGACTCCA...TGAAGAATCACACTGAATCATCAAGGTCTCCTCTCTATGCCCTTGCTGTTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418113.5
3UTR TCA 72 bp ACAAGGCACAGGGTTTACACCTGCACATCTTACTGGTaGCTTACGCCTTGGAGACAAATAAGGCCAACGTGT +
Preference number: 3 (lower is better)
Translates to: TRHRVYTCTSYW*LTPWRQIRPTC
Trigger: ACACGTTGGCCTTATTTGTCTCCAAGGCGTAAGTCACCAGTAAGATGTGCAGGTGTAAACCCTGTGCCTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
3UTR CCA 72 bp AGCTTATCGGTGCATGTTCATCCACCCCAGAAAAGCTaGTGTTCAAATCAGCTCCTTTCTGTTAGCCCTCTG +
Preference number: 3 (lower is better)
Translates to: SLSVHVHPPQKS*CSNQLLSVSPL
Trigger: CAGAGGGCTAACAGAAAGGAGCTGATTTGAACACCAGCTTTTCTGGGGTGGATGAACATGCACCGATAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307507.3
3UTR-3UTR CAA 90 bp ACGGGAGGGTTGCAGTTACAAGGCACAGGGTTTACACCTGCACATCTTACTGGTTACTCTTTTTCTAGGTaGGGTAACTCCTCTTCAGAG +
Preference number: 3 (lower is better)
Translates to: TGGLQLQGTGFTPAHLTGYSFSR*GNSSSE
Trigger: CTCTGAAGAGGAGTTACCCAACCTAGAAAAAGAGTA...ACCAGTAAGATGTGCAGGTGTAAACCCTGTGCCTTGTAACTGCAACCCTCCCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
3UTR-3UTR CAA 90 bp TGCAGTTACAAGGCACAGGGTTTACACCTGCACATCTTACTGGTGACTTACGCCGATGCAGGAACTGGATaGGCTCGGAATTTCTTCTTA +
Preference number: 3 (lower is better)
Translates to: CSYKAQGLHLHILLVTYADAGTG*ARNFFL
Trigger: TAAGAAGAAATTCCGAGCCAATCCAGTTCCTGCATC...GGCGTAAGTCACCAGTAAGATGTGCAGGTGTAAACCCTGTGCCTTGTAACTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
3UTR-3UTR CAA 90 bp CGGGAGGGTTGCAGTTACAAGGCACAGGGTTTACACCTGCACATCTTACTGGTGACACTGTTAAGAGTTTaGGAGACTTGTGTTCTGAGA +
Preference number: 3 (lower is better)
Translates to: REGCSYKAQGLHLHILLVTLLRV*ETCVLR
Trigger: TCTCAGAACACAAGTCTCCAAAACTCTTAACAGTGT...CACCAGTAAGATGTGCAGGTGTAAACCCTGTGCCTTGTAACTGCAACCCTCCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
3UTR-3UTR CAA 90 bp CGGGAGGGTTGCAGTTACAAGGCACAGGGTTTACACCTGCACATCTTACTGGTGTCCTCTTCTTGTTTTTaGAGCGCTTTATGTACCATT +
Preference number: 3 (lower is better)
Translates to: REGCSYKAQGLHLHILLVSSSCF*SALCTI
Trigger: AATGGTACATAAAGCGCTCAAAAAACAAGAAGAGGA...CACCAGTAAGATGTGCAGGTGTAAACCCTGTGCCTTGTAACTGCAACCCTCCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
3UTR-3UTR CAA 90 bp ACGGGAGGGTTGCAGTTACAAGGCACAGGGTTTACACCTGCACATCTTACTGGTACACTGTTAAGAGTTTaGGAGACTTGTGTTCTGAGA +
Preference number: 3 (lower is better)
Translates to: TGGLQLQGTGFTPAHLTGTLLRV*ETCVLR
Trigger: TCTCAGAACACAAGTCTCCAAAACTCTTAACAGTGT...ACCAGTAAGATGTGCAGGTGTAAACCCTGTGCCTTGTAACTGCAACCCTCCCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
3UTR-3UTR CAA 90 bp ACAGATGTTCTAAACACAAATGCGGCTGCTGACACCCTGACGCTGCAAACAACATTTCTGCTGCCATTCTaGCATTTTTCTGAGCAACTC +
Preference number: 3 (lower is better)
Translates to: TDVLNTNAAADTLTLQTTFLLPF*HFSEQL
Trigger: GAGTTGCTCAGAAAAATGCAAGAATGGCAGCAGAAA...TGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAGAACATCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418113.5
ENST00000456262.5
3UTR GCA 72 bp ATCAGGAAAGTTCACAAAGTCCTCATAGCTTATCGGTaGATGTTCATCCACCCCAGAAAAGCTGGTGTTCAA +
Preference number: 3 (lower is better)
Translates to: IRKVHKVLIAYR*MFIHPRKAGVQ
Trigger: TTGAACACCAGCTTTTCTGGGGTGGATGAACATGCACCGATAAGCTATGAGGACTTTGTGAACTTTCCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307507.3
3UTR CCA 72 bp ATCATGGTAAAGGGGGAGAAAGACAGATGCAGGAACTaGATTGGCTCGGAATTTCTTCTTATACTCTGGATC +
Preference number: 3 (lower is better)
Translates to: IMVKGEKDRCRN*IGSEFLLILWI
Trigger: GATCCAGAGTATAAGAAGAAATTCCGAGCCAATCCAGTTCCTGCATCTGTCTTTCTCCCCCTTTACCATGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
3UTR CCA 72 bp CTGGTATCTCTCAGGAAGGTCCTCAAAATCAGGAGTTaGGCACCTAACCTTGTGTTTACACTTCAACTTTAC +
Preference number: 3 (lower is better)
Translates to: LVSLRKVLKIRS*APNLVFTLQLY
Trigger: GTAAAGTTGAAGTGTAAACACAAGGTTAGGTGCCCAACTCCTGATTTTGAGGACCTTCCTGAGAGATACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
3UTR CCA 72 bp AAGAGTTTTGGAGACTTGTGTTCTGAGAGGTGTTTCTaGTATCTCTCAGGAAGGTCCTCAAAATCAGGAGTT +
Preference number: 3 (lower is better)
Translates to: KSFGDLCSERCF*YLSGRSSKSGV
Trigger: AACTCCTGATTTTGAGGACCTTCCTGAGAGATACCAGAAACACCTCTCAGAACACAAGTCTCCAAAACTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
3UTR-3UTR CAA 90 bp AATAGGCAAAGCCTTACTCTAACTGATCAAATGACCAATCAGCTGGATTCAGGCTTCTCTTATCATCATTaGAAAAGGCTCCGGTACTGT +
Preference number: 3 (lower is better)
Translates to: NRQSLTLTDQMTNQLDSGFSYHH*KRLRYC
Trigger: ACAGTACCGGAGCCTTTTCAAATGATGATAAGAGAA...GCCTGAATCCAGCTGATTGGTCATTTGATCAGTTAGAGTAAGGCTTTGCCTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456262.5
3UTR-3UTR CAA 90 bp AGATCAAATGGTTTACACACTGTTAAGAGTTTTGGAGACTTGTGTTCTGAGAGGAAGTCTGTCCACATATaGTTGATGAGCTCCTTAGCA +
Preference number: 3 (lower is better)
Translates to: RSNGLHTVKSFGDLCSERKSVHI*LMSSLA
Trigger: TGCTAAGGAGCTCATCAACAATATGTGGACAGACTT...CCTCTCAGAACACAAGTCTCCAAAACTCTTAACAGTGTGTAAACCATTTGATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
3UTR-3UTR CAA 90 bp CATGAAGATCAAATGGTTTACACACTGTTAAGAGTTTTGGAGACTTGTGTTCTGGCCAAAAGAGCTTCTTaGCTTTTCTCCTTCAGAGAC +
Preference number: 3 (lower is better)
Translates to: HEDQMVYTLLRVLETCVLAKRAS*LFSFRD
Trigger: GTCTCTGAAGGAGAAAAGCAAAGAAGCTCTTTTGGC...CAGAACACAAGTCTCCAAAACTCTTAACAGTGTGTAAACCATTTGATCTTCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
3UTR-3UTR CAA 90 bp TCTTTTAATAGATGCATGTGGAGATGCATGAAGATCAAATGGTTTACACACTGTTACTCTTTTTCTAGGTaGGGTAACTCCTCTTCAGAG +
Preference number: 3 (lower is better)
Translates to: SFNRCMWRCMKIKWFTHCYSFSR*GNSSSE
Trigger: CTCTGAAGAGGAGTTACCCAACCTAGAAAAAGAGTA...ACAGTGTGTAAACCATTTGATCTTCATGCATCTCCACATGCATCTATTAAAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
3UTR-3UTR CAA 90 bp GAATTACTTTGGAGACTTGCCCTAGCCAAGTTATTATGCACAATTTCATCATATAAGTCTGTCCACATATaGTTGATGAGCTCCTTAGCA +
Preference number: 3 (lower is better)
Translates to: ELLWRLALAKLLCTISSYKSVHI*LMSSLA
Trigger: TGCTAAGGAGCTCATCAACAATATGTGGACAGACTT...ATATGATGAAATTGTGCATAATAACTTGGCTAGGGCAAGTCTCCAAAGTAATTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456262.5
CDS-3UTR CCA 90 bp GAAGATACCGTGGGCACGGGAGGGTTGCAGTTACAAGGCACAGGGTTTACACCTCCACTCGGTGGGAGGTaGCCATCGCCCCGCCTCCGA +
Preference number: 4 (lower is better)
Translates to: EDTVGTGGLQLQGTGFTPPLGGR*PSPRLR
Trigger: TCGGAGGCGGGGCGATGGCCACCTCCCACCGAGTGG...AGGTGTAAACCCTGTGCCTTGTAACTGCAACCCTCCCGTGCCCACGGTATCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
CDS-3UTR TCA 90 bp CCGTGGGCACGGGAGGGTTGCAGTTACAAGGCACAGGGTTTACACCTGCACATCCGACCCGCGCTCCAGTaGTGGGATTTACCGGGGTCT +
Preference number: 4 (lower is better)
Translates to: PWAREGCSYKAQGLHLHIRPALQ*WDLPGS
Trigger: AGACCCCGGTAAATCCCATCACTGGAGCGCGGGTCG...GATGTGCAGGTGTAAACCCTGTGCCTTGTAACTGCAACCCTCCCGTGCCCACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
CDS-3UTR CCA 90 bp GGAAGATACCGTGGGCACGGGAGGGTTGCAGTTACAAGGCACAGGGTTTACACCCCGGGGTCTGGAGACTaGAGGCCACCAGCTTCGCCA +
Preference number: 4 (lower is better)
Translates to: GRYRGHGRVAVTRHRVYTPGSGD*RPPASP
Trigger: TGGCGAAGCTGGTGGCCTCCAGTCTCCAGACCCCGG...GGTGTAAACCCTGTGCCTTGTAACTGCAACCCTCCCGTGCCCACGGTATCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
CDS-3UTR CCA 90 bp GCTACAGATGACTTTGATCAACAGCCCTGCACATATCAGAAGCGTCCCCACAGACCACTCGGTGGGAGGTaGCCATCGCCCCGCCTCCGA +
Preference number: 4 (lower is better)
Translates to: ATDDFDQQPCTYQKRPHRPLGGR*PSPRLR
Trigger: TCGGAGGCGGGGCGATGGCCACCTCCCACCGAGTGG...TCTGTGGGGACGCTTCTGATATGTGCAGGGCTGTTGATCAAAGTCATCTGTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000456262.5
CDS-3UTR TCA 90 bp ATACCGTGGGCACGGGAGGGTTGCAGTTACAAGGCACAGGGTTTACACCTGCACCACAAATGCGGCTGCTaGCACCCTGACGCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: IPWAREGCSYKAQGLHLHHKCGC*HPDAAN
Trigger: GTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTG...GTGCAGGTGTAAACCCTGTGCCTTGTAACTGCAACCCTCCCGTGCCCACGGTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456262.5
CDS-3UTR CCA 90 bp CTAAACACAAATGCGGCTGCTGACACCCTGACGCTGCAAACAACAGCAAGGGCATCTTCGCGTTCGTACTaGGCGACCCGCGCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: LNTNAAADTLTLQTTARASSRSY*ATRAPV
Trigger: CACTGGAGCGCGGGTCGCCCAGTACGAACGCGAAGA...TGCCCTTGCTGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR CCA 90 bp ACAGATGTTCTAAACACAAATGCGGCTGCTGACACCCTGACGCTGCAAACAACACCGGGACGGGAAAGCTaGTGCGGCCCCTGGCAACCC +
Preference number: 4 (lower is better)
Translates to: TDVLNTNAAADTLTLQTTPGRES*CGPWQP
Trigger: GGGTTGCCAGGGGCCGCACCAGCTTTCCCGTCCCGG...TGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAGAACATCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405894.3
CDS-3UTR GCA 90 bp ATACCGTGGGCACGGGAGGGTTGCAGTTACAAGGCACAGGGTTTACACCTGCACAGAAAGTCTCTCAGCTaGTTTTCCCGGGCTGCTCGC +
Preference number: 4 (lower is better)
Translates to: IPWAREGCSYKAQGLHLHRKSLS*FSRAAR
Trigger: GCGAGCAGCCCGGGAAAAGCAGCTGAGAGACTTTCT...GTGCAGGTGTAAACCCTGTGCCTTGTAACTGCAACCCTCCCGTGCCCACGGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
CDS-3UTR CCA 90 bp GCTACAGATGACTTTGATCAACAGCCCTGCACATATCAGAAGCGTCCCCACAGACCGGGGTCTGGAGACTaGAGGCCACCAGCTTCGCCA +
Preference number: 4 (lower is better)
Translates to: ATDDFDQQPCTYQKRPHRPGSGD*RPPASP
Trigger: TGGCGAAGCTGGTGGCCTCCAGTCTCCAGACCCCGG...TCTGTGGGGACGCTTCTGATATGTGCAGGGCTGTTGATCAAAGTCATCTGTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR CCA 90 bp CAAGGCACAGGGTTTACACCTGCACATCTTACTGGTGACTTACGCCTTGGAGACTCTTCGCGTTCGTACTaGGCGACCCGCGCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: QGTGFTPAHLTGDLRLGDSSRSY*ATRAPV
Trigger: CACTGGAGCGCGGGTCGCCCAGTACGAACGCGAAGA...GTCTCCAAGGCGTAAGTCACCAGTAAGATGTGCAGGTGTAAACCCTGTGCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
CDS-3UTR TCA 90 bp CTAAACACAAATGCGGCTGCTGACACCCTGACGCTGCAAACAACAGCAAGGGCACACAAATGCGGCTGCTaGCACCCTGACGCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: LNTNAAADTLTLQTTARAHKCGC*HPDAAN
Trigger: GTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTG...TGCCCTTGCTGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR GCA 90 bp CTAAACACAAATGCGGCTGCTGACACCCTGACGCTGCAAACAACAGCAAGGGCACTGCTTTTCCCGGGCTaGTCGCTTCTGTTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: LNTNAAADTLTLQTTARALLFPG*SLLFLP
Trigger: AGGGAGGAACAGAAGCGAGCAGCCCGGGAAAAGCAG...TGCCCTTGCTGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR GCA 90 bp ATACCGTGGGCACGGGAGGGTTGCAGTTACAAGGCACAGGGTTTACACCTGCACTTCATGCCATTCTCCTaGCTCTGCCTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: IPWAREGCSYKAQGLHLHFMPFS*LCLPSS
Trigger: GCTACTTGGGAGGCAGAGGCAGGAGAATGGCATGAA...GTGCAGGTGTAAACCCTGTGCCTTGTAACTGCAACCCTCCCGTGCCCACGGTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456262.5
3UTR CAA 72 bp TCTCGTCCTCTGGAAGATACCGTGGGCACGGGAGGGTaGCAGTTACAAGGCACAGGGTTTACACCTGCACAT +
Preference number: 4 (lower is better)
Translates to: SRPLEDTVGTGG*QLQGTGFTPAH
Trigger: ATGTGCAGGTGTAAACCCTGTGCCTTGTAACTGCAACCCTCCCGTGCCCACGGTATCTTCCAGAGGACGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
CDS-3UTR TCA 90 bp ACAGATGTTCTAAACACAAATGCGGCTGCTGACACCCTGACGCTGCAAACAACACGACCCGCGCTCCAGTaGTGGGATTTACCGGGGTCT +
Preference number: 4 (lower is better)
Translates to: TDVLNTNAAADTLTLQTTRPALQ*WDLPGS
Trigger: AGACCCCGGTAAATCCCATCACTGGAGCGCGGGTCG...TGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAGAACATCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR GCA 90 bp GCTACAGATGACTTTGATCAACAGCCCTGCACATATCAGAAGCGTCCCCACAGAGTTCAAATCAGCCGATaGCCCAGCGGGCTGAGCCAC +
Preference number: 4 (lower is better)
Translates to: ATDDFDQQPCTYQKRPHRVQISR*PSGLSH
Trigger: GTGGCTCAGCCCGCTGGGGCATCGGCTGATTTGAAC...TCTGTGGGGACGCTTCTGATATGTGCAGGGCTGTTGATCAAAGTCATCTGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR GCA 90 bp TGCAGTTACAAGGCACAGGGTTTACACCTGCACATCTTACTGGTGACTTACGCCGTTCAAATCAGCCGATaGCCCAGCGGGCTGAGCCAC +
Preference number: 4 (lower is better)
Translates to: CSYKAQGLHLHILLVTYAVQISR*PSGLSH
Trigger: GTGGCTCAGCCCGCTGGGGCATCGGCTGATTTGAAC...GGCGTAAGTCACCAGTAAGATGTGCAGGTGTAAACCCTGTGCCTTGTAACTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456262.5
CDS-3UTR GCA 90 bp AATAGGCAAAGCCTTACTCTAACTGATCAAATGACCAATCAGCTGGATTCAGGCGGACGGGAAAGCTGGTaGGGCCCCTGGCAACCCGGG +
Preference number: 4 (lower is better)
Translates to: NRQSLTLTDQMTNQLDSGGRESW*GPWQPG
Trigger: CCCGGGTTGCCAGGGGCCGCACCAGCTTTCCCGTCC...GCCTGAATCCAGCTGATTGGTCATTTGATCAGTTAGAGTAAGGCTTTGCCTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405894.3
CDS-3UTR GCA 90 bp CTAAACACAAATGCGGCTGCTGACACCCTGACGCTGCAAACAACAGCAAGGGCATGTTGCTCAGGCTGGTaGGGTGGCACAATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: LNTNAAADTLTLQTTARACCSGW*GGTISA
Trigger: AGCTGAGATTGTGCCACCGCACCAGCCTGAGCAACA...TGCCCTTGCTGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418113.5
CDS-3UTR CCA 90 bp AAGGTCCTCAAAATCAGGAGTTGGGCACCTAACCTTGTGTTTACACTTCAACTTCCACTCGGTGGGAGGTaGCCATCGCCCCGCCTCCGA +
Preference number: 4 (lower is better)
Translates to: KVLKIRSWAPNLVFTLQLPLGGR*PSPRLR
Trigger: TCGGAGGCGGGGCGATGGCCACCTCCCACCGAGTGG...AAGTTGAAGTGTAAACACAAGGTTAGGTGCCCAACTCCTGATTTTGAGGACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
CDS-3UTR CCA 90 bp TACTCTTTTTCTAGGTTGGGTAACTCCTCTTCAGAGGAGGACACATACAAGGAGAGCTTCGCCACTCGGTaGGAGGTGGCCATCGCCCCG +
Preference number: 4 (lower is better)
Translates to: YSFSRLGNSSSEEDTYKESFATR*EVAIAP
Trigger: CGGGGCGATGGCCACCTCCCACCGAGTGGCGAAGCT...CTCCTTGTATGTGTCCTCCTCTGAAGAGGAGTTACCCAACCTAGAAAAAGAGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
CDS-3UTR CCA 90 bp CTGAGAGGTGTTTCTGGTATCTCTCAGGAAGGTCCTCAAAATCAGGAGTTGGGCGGATTTACCGGGGTCTaGAGACTGGAGGCCACCAGC +
Preference number: 4 (lower is better)
Translates to: LRGVSGISQEGPQNQELGGFTGV*RLEATS
Trigger: GCTGGTGGCCTCCAGTCTCCAGACCCCGGTAAATCC...GCCCAACTCCTGATTTTGAGGACCTTCCTGAGAGATACCAGAAACACCTCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
CDS-3UTR CCA 90 bp ACAGATGTTCTAAACACAAATGCGGCTGCTGACACCCTGACGCTGCAAACAACATCTTCGCGTTCGTACTaGGCGACCCGCGCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: TDVLNTNAAADTLTLQTTSSRSY*ATRAPV
Trigger: CACTGGAGCGCGGGTCGCCCAGTACGAACGCGAAGA...TGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAGAACATCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR CCA 90 bp CTAAACACAAATGCGGCTGCTGACACCCTGACGCTGCAAACAACAGCAAGGGCAGCAAGCTCTGCCTCCTaGGTTCATGCCATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: LNTNAAADTLTLQTTARAASSAS*VHAILL
Trigger: CAGGAGAATGGCATGAACCCAGGAGGCAGAGCTTGC...TGCCCTTGCTGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR CCA 90 bp AATAGGCAAAGCCTTACTCTAACTGATCAAATGACCAATCAGCTGGATTCAGGCCCTGAGCGCCTGCGCTaGCCCGGGACGGGAAAGCTG +
Preference number: 4 (lower is better)
Translates to: NRQSLTLTDQMTNQLDSGPERLR*PGTGKL
Trigger: CAGCTTTCCCGTCCCGGGCCAGCGCAGGCGCTCAGG...GCCTGAATCCAGCTGATTGGTCATTTGATCAGTTAGAGTAAGGCTTTGCCTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405894.3
CDS-3UTR TCA 90 bp GCTACAGATGACTTTGATCAACAGCCCTGCACATATCAGAAGCGTCCCCACAGACGGCTGCTGACACCCTaGCGCTGCAAACAACAGCAA +
Preference number: 4 (lower is better)
Translates to: ATDDFDQQPCTYQKRPHRRLLTP*RCKQQQ
Trigger: TTGCTGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCG...TCTGTGGGGACGCTTCTGATATGTGCAGGGCTGTTGATCAAAGTCATCTGTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR TCA 90 bp GCTACAGATGACTTTGATCAACAGCCCTGCACATATCAGAAGCGTCCCCACAGACACAAATGCGGCTGCTaGCACCCTGACGCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: ATDDFDQQPCTYQKRPHRHKCGC*HPDAAN
Trigger: GTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTG...TCTGTGGGGACGCTTCTGATATGTGCAGGGCTGTTGATCAAAGTCATCTGTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR GCA 90 bp CTAAACACAAATGCGGCTGCTGACACCCTGACGCTGCAAACAACAGCAAGGGCAGGGGAGAAAGACAGATaGAGGAACTGGATTGGCTCG +
Preference number: 4 (lower is better)
Translates to: LNTNAAADTLTLQTTARAGEKDR*RNWIGS
Trigger: CGAGCCAATCCAGTTCCTGCATCTGTCTTTCTCCCC...TGCCCTTGCTGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR GCA 90 bp GCTACAGATGACTTTGATCAACAGCCCTGCACATATCAGAAGCGTCCCCACAGACTGCTTTTCCCGGGCTaGTCGCTTCTGTTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: ATDDFDQQPCTYQKRPHRLLFPG*SLLFLP
Trigger: AGGGAGGAACAGAAGCGAGCAGCCCGGGAAAAGCAG...TCTGTGGGGACGCTTCTGATATGTGCAGGGCTGTTGATCAAAGTCATCTGTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR GCA 90 bp ATACCGTGGGCACGGGAGGGTTGCAGTTACAAGGCACAGGGTTTACACCTGCACGATGAGTTCTGTAAATaGTCCTGGGCTCTCAGCTGT +
Preference number: 4 (lower is better)
Translates to: IPWAREGCSYKAQGLHLHDEFCK*SWALSC
Trigger: ACAGCTGAGAGCCCAGGAGCATTTACAGAACTCATC...GTGCAGGTGTAAACCCTGTGCCTTGTAACTGCAACCCTCCCGTGCCCACGGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
CDS-3UTR GCA 90 bp CTAAACACAAATGCGGCTGCTGACACCCTGACGCTGCAAACAACAGCAAGGGCATTCATGCCATTCTCCTaGCTCTGCCTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: LNTNAAADTLTLQTTARAFMPFS*LCLPSS
Trigger: GCTACTTGGGAGGCAGAGGCAGGAGAATGGCATGAA...TGCCCTTGCTGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR CCA 90 bp GCTACAGATGACTTTGATCAACAGCCCTGCACATATCAGAAGCGTCCCCACAGACTCAGGCTGGTGCGGTaGCACAATCTCAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: ATDDFDQQPCTYQKRPHRLRLVR*HNLSSL
Trigger: CAGTGAGCTGAGATTGTGCCACCGCACCAGCCTGAG...TCTGTGGGGACGCTTCTGATATGTGCAGGGCTGTTGATCAAAGTCATCTGTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418113.5
CDS-3UTR TCA 90 bp GCTACAGATGACTTTGATCAACAGCCCTGCACATATCAGAAGCGTCCCCACAGACCTGCATCCACAAGCTaGCCTACAAGGCAGAGGAGA +
Preference number: 4 (lower is better)
Translates to: ATDDFDQQPCTYQKRPHRPASTS*PTRQRR
Trigger: TCTCCTCTGCCTTGTAGGTCAGCTTGTGGATGCAGG...TCTGTGGGGACGCTTCTGATATGTGCAGGGCTGTTGATCAAAGTCATCTGTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR TCA 90 bp ACAGATGTTCTAAACACAAATGCGGCTGCTGACACCCTGACGCTGCAAACAACACGGCTGCTGACACCCTaGCGCTGCAAACAACAGCAA +
Preference number: 4 (lower is better)
Translates to: TDVLNTNAAADTLTLQTTRLLTP*RCKQQQ
Trigger: TTGCTGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCG...TGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAGAACATCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR GCA 90 bp GCTACAGATGACTTTGATCAACAGCCCTGCACATATCAGAAGCGTCCCCACAGAAGAAAGTCTCTCAGCTaGTTTTCCCGGGCTGCTCGC +
Preference number: 4 (lower is better)
Translates to: ATDDFDQQPCTYQKRPHRRKSLS*FSRAAR
Trigger: GCGAGCAGCCCGGGAAAAGCAGCTGAGAGACTTTCT...TCTGTGGGGACGCTTCTGATATGTGCAGGGCTGTTGATCAAAGTCATCTGTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR GCA 90 bp GCTACAGATGACTTTGATCAACAGCCCTGCACATATCAGAAGCGTCCCCACAGAGACACCTGGGGTTCCTaGATCCACAAGCTGACCTAC +
Preference number: 4 (lower is better)
Translates to: ATDDFDQQPCTYQKRPHRDTWGS*IHKLTY
Trigger: GTAGGTCAGCTTGTGGATGCAGGAACCCCAGGTGTC...TCTGTGGGGACGCTTCTGATATGTGCAGGGCTGTTGATCAAAGTCATCTGTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR CCA 90 bp AATAGGCAAAGCCTTACTCTAACTGATCAAATGACCAATCAGCTGGATTCAGGCCCGGGGTCTGGAGACTaGAGGCCACCAGCTTCGCCA +
Preference number: 4 (lower is better)
Translates to: NRQSLTLTDQMTNQLDSGPGSGD*RPPASP
Trigger: TGGCGAAGCTGGTGGCCTCCAGTCTCCAGACCCCGG...GCCTGAATCCAGCTGATTGGTCATTTGATCAGTTAGAGTAAGGCTTTGCCTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR CCA 90 bp GGAAGATACCGTGGGCACGGGAGGGTTGCAGTTACAAGGCACAGGGTTTACACCGACAGATGCAGGAACTaGATTGGCTCGGAATTTCTT +
Preference number: 4 (lower is better)
Translates to: GRYRGHGRVAVTRHRVYTDRCRN*IGSEFL
Trigger: AAGAAATTCCGAGCCAATCCAGTTCCTGCATCTGTC...GGTGTAAACCCTGTGCCTTGTAACTGCAACCCTCCCGTGCCCACGGTATCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
CDS-3UTR CCA 90 bp ACAGATGTTCTAAACACAAATGCGGCTGCTGACACCCTGACGCTGCAAACAACACTCTGGAAGATACCGTaGGCACGGGAGGGTTGCAGT +
Preference number: 4 (lower is better)
Translates to: TDVLNTNAAADTLTLQTTLWKIP*AREGCS
Trigger: ACTGCAACCCTCCCGTGCCCACGGTATCTTCCAGAG...TGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAGAACATCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR TCA 90 bp AATAGGCAAAGCCTTACTCTAACTGATCAAATGACCAATCAGCTGGATTCAGGCCGACCCGCGCTCCAGTaGTGGGATTTACCGGGGTCT +
Preference number: 4 (lower is better)
Translates to: NRQSLTLTDQMTNQLDSGRPALQ*WDLPGS
Trigger: AGACCCCGGTAAATCCCATCACTGGAGCGCGGGTCG...GCCTGAATCCAGCTGATTGGTCATTTGATCAGTTAGAGTAAGGCTTTGCCTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR TCA 90 bp ATACCGTGGGCACGGGAGGGTTGCAGTTACAAGGCACAGGGTTTACACCTGCACCTTGTCATTGGTAGTTaGACCATAAGTAGATCGAGG +
Preference number: 4 (lower is better)
Translates to: IPWAREGCSYKAQGLHLHLVIGS*TISRSR
Trigger: CCTCGATCTACTTATGGTTCAACTACCAATGACAAG...GTGCAGGTGTAAACCCTGTGCCTTGTAACTGCAACCCTCCCGTGCCCACGGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
CDS-3UTR TCA 90 bp ATGCTCCTGGGCTCTCAGCTGTGTCCTAAGGTTTCGATAGAGCTCTTCTTCTTTCCTGCATCCACAAGCTaGCCTACAAGGCAGAGGAGA +
Preference number: 4 (lower is better)
Translates to: MLLGSQLCPKVSIELFFFPASTS*PTRQRR
Trigger: TCTCCTCTGCCTTGTAGGTCAGCTTGTGGATGCAGG...AAAGAAGAAGAGCTCTATCGAAACCTTAGGACACAGCTGAGAGCCCAGGAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
CDS-3UTR GCA 90 bp AAGGTCCTCAAAATCAGGAGTTGGGCACCTAACCTTGTGTTTACACTTCAACTTGAAACCCCATCTCGATaGCCCAGCGGGCTGAGCCAC +
Preference number: 4 (lower is better)
Translates to: KVLKIRSWAPNLVFTLQLETPSR*PSGLSH
Trigger: GTGGCTCAGCCCGCTGGGGCATCGAGATGGGGTTTC...AAGTTGAAGTGTAAACACAAGGTTAGGTGCCCAACTCCTGATTTTGAGGACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307507.3
CDS-3UTR GCA 90 bp CTGAGAGGTGTTTCTGGTATCTCTCAGGAAGGTCCTCAAAATCAGGAGTTGGGCGGGGAGAAAGACAGATaGAGGAACTGGATTGGCTCG +
Preference number: 4 (lower is better)
Translates to: LRGVSGISQEGPQNQELGGEKDR*RNWIGS
Trigger: CGAGCCAATCCAGTTCCTGCATCTGTCTTTCTCCCC...GCCCAACTCCTGATTTTGAGGACCTTCCTGAGAGATACCAGAAACACCTCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
CDS-3UTR GCA 90 bp ATGCTCCTGGGCTCTCAGCTGTGTCCTAAGGTTTCGATAGAGCTCTTCTTCTTTAGAAAGTCTCTCAGCTaGTTTTCCCGGGCTGCTCGC +
Preference number: 4 (lower is better)
Translates to: MLLGSQLCPKVSIELFFFRKSLS*FSRAAR
Trigger: GCGAGCAGCCCGGGAAAAGCAGCTGAGAGACTTTCT...AAAGAAGAAGAGCTCTATCGAAACCTTAGGACACAGCTGAGAGCCCAGGAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
CDS-3UTR GCA 90 bp CTTATCGGTGCATGTTCATCCACCCCAGAAAAGCTGGTGTTCAAATCAGCTCCTGACACCTGGGGTTCCTaGATCCACAAGCTGACCTAC +
Preference number: 4 (lower is better)
Translates to: LIGACSSTPEKLVFKSAPDTWGS*IHKLTY
Trigger: GTAGGTCAGCTTGTGGATGCAGGAACCCCAGGTGTC...AGGAGCTGATTTGAACACCAGCTTTTCTGGGGTGGATGAACATGCACCGATAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000307507.3
CDS-3UTR GCA 90 bp ACAGATGTTCTAAACACAAATGCGGCTGCTGACACCCTGACGCTGCAAACAACAGACACCTGGGGTTCCTaGATCCACAAGCTGACCTAC +
Preference number: 4 (lower is better)
Translates to: TDVLNTNAAADTLTLQTTDTWGS*IHKLTY
Trigger: GTAGGTCAGCTTGTGGATGCAGGAACCCCAGGTGTC...TGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAGAACATCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR GCA 90 bp CTAAACACAAATGCGGCTGCTGACACCCTGACGCTGCAAACAACAGCAAGGGCAACAATCTCAGCTCACTaGAACTTCTACCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: LNTNAAADTLTLQTTARATISAH*NFYLLG
Trigger: ACCCAGGAGGTAGAAGTTGCAGTGAGCTGAGATTGT...TGCCCTTGCTGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418113.5
CDS-3UTR CCA 90 bp AAACAACAGCAAGGGCATAGAGAGGAGACCTTGATGATTCAGTGTGATTCTTCATCTTCGCGTTCGTACTaGGCGACCCGCGCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: KQQQGHREETLMIQCDSSSSRSY*ATRAPV
Trigger: CACTGGAGCGCGGGTCGCCCAGTACGAACGCGAAGA...TGAAGAATCACACTGAATCATCAAGGTCTCCTCTCTATGCCCTTGCTGTTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418113.5
ENST00000456262.5
CDS-3UTR CCA 90 bp ATACCGTGGGCACGGGAGGGTTGCAGTTACAAGGCACAGGGTTTACACCTGCACCTCAAAATCAGGAGTTaGGCACCTAACCTTGTGTTT +
Preference number: 4 (lower is better)
Translates to: IPWAREGCSYKAQGLHLHLKIRS*APNLVF
Trigger: AAACACAAGGTTAGGTGCCCAACTCCTGATTTTGAG...GTGCAGGTGTAAACCCTGTGCCTTGTAACTGCAACCCTCCCGTGCCCACGGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
CDS-3UTR CCA 90 bp AGCAACGGTTATTCATCTGGGCAGCAGCAGTTCGTTTTAGTAGCAGTGTCTGAACTCTGGAAGATACCGTaGGCACGGGAGGGTTGCAGT +
Preference number: 4 (lower is better)
Translates to: SNGYSSGQQQFVLVAVSELWKIP*AREGCS
Trigger: ACTGCAACCCTCCCGTGCCCACGGTATCTTCCAGAG...TTCAGACACTGCTACTAAAACGAACTGCTGCTGCCCAGATGAATAACCGTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307507.3
CDS-3UTR CCA 90 bp GCACAGGGTTTACACCTGCACATCTTACTGGTGACTTACGCCTTGGAGACAAATGCAAGCTCTGCCTCCTaGGTTCATGCCATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: AQGLHLHILLVTYALETNASSAS*VHAILL
Trigger: CAGGAGAATGGCATGAACCCAGGAGGCAGAGCTTGC...ATTTGTCTCCAAGGCGTAAGTCACCAGTAAGATGTGCAGGTGTAAACCCTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456262.5
CDS-3UTR TCA 90 bp AAAAGCTGGTGTTCAAATCAGCTCCTTTCTGTTAGCCCTCTGACTGCTTCCTGTATCTGGCCAACATGGTaGAACCCCATCTCGATGCCC +
Preference number: 4 (lower is better)
Translates to: KSWCSNQLLSVSPLTASCIWPTW*NPISMP
Trigger: GGGCATCGAGATGGGGTTTCACCATGTTGGCCAGAT...ACAGGAAGCAGTCAGAGGGCTAACAGAAAGGAGCTGATTTGAACACCAGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307507.3
CDS-3UTR TCA 90 bp AAAAGCTGGTGTTCAAATCAGCTCCTTTCTGTTAGCCCTCTGACTGCTTCCTGTCCTGCATCCACAAGCTaGCCTACAAGGCAGAGGAGA +
Preference number: 4 (lower is better)
Translates to: KSWCSNQLLSVSPLTASCPASTS*PTRQRR
Trigger: TCTCCTCTGCCTTGTAGGTCAGCTTGTGGATGCAGG...ACAGGAAGCAGTCAGAGGGCTAACAGAAAGGAGCTGATTTGAACACCAGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307507.3
CDS-3UTR GCA 90 bp ACAGATGTTCTAAACACAAATGCGGCTGCTGACACCCTGACGCTGCAAACAACAGGGGAGAAAGACAGATaGAGGAACTGGATTGGCTCG +
Preference number: 4 (lower is better)
Translates to: TDVLNTNAAADTLTLQTTGEKDR*RNWIGS
Trigger: CGAGCCAATCCAGTTCCTGCATCTGTCTTTCTCCCC...TGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAGAACATCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR GCA 90 bp AAGACAGATGCAGGAACTGGATTGGCTCGGAATTTCTTCTTATACTCTGGATCCCTGCTTTTCCCGGGCTaGTCGCTTCTGTTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: KTDAGTGLARNFFLYSGSLLFPG*SLLFLP
Trigger: AGGGAGGAACAGAAGCGAGCAGCCCGGGAAAAGCAG...GGATCCAGAGTATAAGAAGAAATTCCGAGCCAATCCAGTTCCTGCATCTGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
CDS-3UTR GCA 90 bp AGGGGGAGAAAGACAGATGCAGGAACTGGATTGGCTCGGAATTTCTTCTTATACGACACCTGGGGTTCCTaGATCCACAAGCTGACCTAC +
Preference number: 4 (lower is better)
Translates to: RGRKTDAGTGLARNFFLYDTWGS*IHKLTY
Trigger: GTAGGTCAGCTTGTGGATGCAGGAACCCCAGGTGTC...GTATAAGAAGAAATTCCGAGCCAATCCAGTTCCTGCATCTGTCTTTCTCCCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
CDS-3UTR GCA 90 bp GGAAGATACCGTGGGCACGGGAGGGTTGCAGTTACAAGGCACAGGGTTTACACCTTCTGTGAAATGCACTaGAGAGAAAAAGAATGGGCA +
Preference number: 4 (lower is better)
Translates to: GRYRGHGRVAVTRHRVYTFCEMH*REKEWA
Trigger: TGCCCATTCTTTTTCTCTGCAGTGCATTTCACAGAA...GGTGTAAACCCTGTGCCTTGTAACTGCAACCCTCCCGTGCCCACGGTATCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456262.5
CDS-3UTR GCA 90 bp CTAAACACAAATGCGGCTGCTGACACCCTGACGCTGCAAACAACAGCAAGGGCAAGGTGTGCACCACCATaGCTGGCTAATTTTCTGTAT +
Preference number: 4 (lower is better)
Translates to: LNTNAAADTLTLQTTARARCAPP*LANFLY
Trigger: ATACAGAAAATTAGCCAGGCATGGTGGTGCACACCT...TGCCCTTGCTGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418113.5
CDS-3UTR CCA 90 bp AATAGGCAAAGCCTTACTCTAACTGATCAAATGACCAATCAGCTGGATTCAGGCGGATTTACCGGGGTCTaGAGACTGGAGGCCACCAGC +
Preference number: 4 (lower is better)
Translates to: NRQSLTLTDQMTNQLDSGGFTGV*RLEATS
Trigger: GCTGGTGGCCTCCAGTCTCCAGACCCCGGTAAATCC...GCCTGAATCCAGCTGATTGGTCATTTGATCAGTTAGAGTAAGGCTTTGCCTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR CCA 90 bp AAAGACAGATGCAGGAACTGGATTGGCTCGGAATTTCTTCTTATACTCTGGATCGGATTTACCGGGGTCTaGAGACTGGAGGCCACCAGC +
Preference number: 4 (lower is better)
Translates to: KDRCRNWIGSEFLLILWIGFTGV*RLEATS
Trigger: GCTGGTGGCCTCCAGTCTCCAGACCCCGGTAAATCC...GATCCAGAGTATAAGAAGAAATTCCGAGCCAATCCAGTTCCTGCATCTGTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
CDS-3UTR CCA 90 bp CTAAACACAAATGCGGCTGCTGACACCCTGACGCTGCAAACAACAGCAAGGGCAGACAGATGCAGGAACTaGATTGGCTCGGAATTTCTT +
Preference number: 4 (lower is better)
Translates to: LNTNAAADTLTLQTTARADRCRN*IGSEFL
Trigger: AAGAAATTCCGAGCCAATCCAGTTCCTGCATCTGTC...TGCCCTTGCTGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR CCA 90 bp GATGCAGGAACTGGATTGGCTCGGAATTTCTTCTTATACTCTGGATCCTCTTCTCTCTGGAAGATACCGTaGGCACGGGAGGGTTGCAGT +
Preference number: 4 (lower is better)
Translates to: DAGTGLARNFFLYSGSSSLWKIP*AREGCS
Trigger: ACTGCAACCCTCCCGTGCCCACGGTATCTTCCAGAG...AGAAGAGGATCCAGAGTATAAGAAGAAATTCCGAGCCAATCCAGTTCCTGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
CDS-3UTR TCA 90 bp CTAAACACAAATGCGGCTGCTGACACCCTGACGCTGCAAACAACAGCAAGGGCACTTGTCATTGGTAGTTaGACCATAAGTAGATCGAGG +
Preference number: 4 (lower is better)
Translates to: LNTNAAADTLTLQTTARALVIGS*TISRSR
Trigger: CCTCGATCTACTTATGGTTCAACTACCAATGACAAG...TGCCCTTGCTGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR TCA 90 bp GCTACAGATGACTTTGATCAACAGCCCTGCACATATCAGAAGCGTCCCCACAGATGCACATCTTACTGGTaGCTTACGCCTTGGAGACAA +
Preference number: 4 (lower is better)
Translates to: ATDDFDQQPCTYQKRPHRCTSYW*LTPWRQ
Trigger: TTGTCTCCAAGGCGTAAGTCACCAGTAAGATGTGCA...TCTGTGGGGACGCTTCTGATATGTGCAGGGCTGTTGATCAAAGTCATCTGTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR TCA 90 bp CTAAACACAAATGCGGCTGCTGACACCCTGACGCTGCAAACAACAGCAAGGGCATTTCTTTTCCTCAAGTaGTCTCCTTACGGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: LNTNAAADTLTLQTTARAFLFLK*SPYGLF
Trigger: GAACAAGCCGTAAGGAGATCACTTGAGGAAAAGAAA...TGCCCTTGCTGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404929.6
ENST00000418113.5
CDS-3UTR TCA 90 bp AAGGTCCTCAAAATCAGGAGTTGGGCACCTAACCTTGTGTTTACACTTCAACTTCGGCTGCTGACACCCTaGCGCTGCAAACAACAGCAA +
Preference number: 4 (lower is better)
Translates to: KVLKIRSWAPNLVFTLQLRLLTP*RCKQQQ
Trigger: TTGCTGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCG...AAGTTGAAGTGTAAACACAAGGTTAGGTGCCCAACTCCTGATTTTGAGGACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456262.5
CDS-3UTR TCA 90 bp ACAGATGTTCTAAACACAAATGCGGCTGCTGACACCCTGACGCTGCAAACAACACCATTGCGCCTGGCCTaGGACATTTTACTCTGGATT +
Preference number: 4 (lower is better)
Translates to: TDVLNTNAAADTLTLQTTPLRLA*DILLWI
Trigger: AATCCAGAGTAAAATGTCTCAGGCCAGGCGCAATGG...TGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAGAACATCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418113.5
CDS-3UTR TCA 90 bp AAACAACAGCAAGGGCATAGAGAGGAGACCTTGATGATTCAGTGTGATTCTTCAACTCCTGACCTCAGGTaGTCTGCCTGTCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: KQQQGHREETLMIQCDSSTPDLR*SACLGL
Trigger: GAGGCCAAGACAGGCAGATCACCTGAGGTCAGGAGT...TGAAGAATCACACTGAATCATCAAGGTCTCCTCTCTATGCCCTTGCTGTTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418113.5
CDS-3UTR CCA 90 bp GAATTACTTTGGAGACTTGCCCTAGCCAAGTTATTATGCACAATTTCATCATATAGCTTCGCCACTCGGTaGGAGGTGGCCATCGCCCCG +
Preference number: 4 (lower is better)
Translates to: ELLWRLALAKLLCTISSYSFATR*EVAIAP
Trigger: CGGGGCGATGGCCACCTCCCACCGAGTGGCGAAGCT...ATATGATGAAATTGTGCATAATAACTTGGCTAGGGCAAGTCTCCAAAGTAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000456262.5
CDS-3UTR CCA 90 bp ATACTCCTCATTAGAGTGGTGAATATCAGGAAAGTTCACAAAGTCCTCATAGCTTCTTCGCGTTCGTACTaGGCGACCCGCGCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: ILLIRVVNIRKVHKVLIASSRSY*ATRAPV
Trigger: CACTGGAGCGCGGGTCGCCCAGTACGAACGCGAAGA...AGCTATGAGGACTTTGTGAACTTTCCTGATATTCACCACTCTAATGAGGAGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307507.3
CDS-3UTR CCA 90 bp CGGGAGGGTTGCAGTTACAAGGCACAGGGTTTACACCTGCACATCTTACTGGTGACTCTTTTTCTAGGTTaGGTAACTCCTCTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: REGCSYKAQGLHLHILLVTLFLG*VTPLQR
Trigger: CCTCTGAAGAGGAGTTACCCAACCTAGAAAAAGAGT...CACCAGTAAGATGTGCAGGTGTAAACCCTGTGCCTTGTAACTGCAACCCTCCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
CDS-3UTR CCA 90 bp GCTACAGATGACTTTGATCAACAGCCCTGCACATATCAGAAGCGTCCCCACAGAATGAGCCATTGCGCCTaGCCTGAGACATTTTACTCT +
Preference number: 4 (lower is better)
Translates to: ATDDFDQQPCTYQKRPHRMSHCA*PETFYS
Trigger: AGAGTAAAATGTCTCAGGCCAGGCGCAATGGCTCAT...TCTGTGGGGACGCTTCTGATATGTGCAGGGCTGTTGATCAAAGTCATCTGTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418113.5
CDS-3UTR TCA 90 bp CATGAAGATCAAATGGTTTACACACTGTTAAGAGTTTTGGAGACTTGTGTTCTGCGACCCGCGCTCCAGTaGTGGGATTTACCGGGGTCT +
Preference number: 4 (lower is better)
Translates to: HEDQMVYTLLRVLETCVLRPALQ*WDLPGS
Trigger: AGACCCCGGTAAATCCCATCACTGGAGCGCGGGTCG...CAGAACACAAGTCTCCAAAACTCTTAACAGTGTGTAAACCATTTGATCTTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
CDS-3UTR TCA 90 bp CTAAACACAAATGCGGCTGCTGACACCCTGACGCTGCAAACAACAGCAAGGGCATCCTCATTAGAGTGGTaGATATCAGGAAAGTTCACA +
Preference number: 4 (lower is better)
Translates to: LNTNAAADTLTLQTTARASSLEW*ISGKFT
Trigger: TGTGAACTTTCCTGATATTCACCACTCTAATGAGGA...TGCCCTTGCTGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR TCA 90 bp CTAAACACAAATGCGGCTGCTGACACCCTGACGCTGCAAACAACAGCAAGGGCATCTCTTATCATCATTTaGAAAGGCTCCGGTACTGTA +
Preference number: 4 (lower is better)
Translates to: LNTNAAADTLTLQTTARASLIII*KGSGTV
Trigger: TACAGTACCGGAGCCTTTTCAAATGATGATAAGAGA...TGCCCTTGCTGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR TCA 90 bp AATAGGCAAAGCCTTACTCTAACTGATCAAATGACCAATCAGCTGGATTCAGGCCCTGCATCCACAAGCTaGCCTACAAGGCAGAGGAGA +
Preference number: 4 (lower is better)
Translates to: NRQSLTLTDQMTNQLDSGPASTS*PTRQRR
Trigger: TCTCCTCTGCCTTGTAGGTCAGCTTGTGGATGCAGG...GCCTGAATCCAGCTGATTGGTCATTTGATCAGTTAGAGTAAGGCTTTGCCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR TCA 90 bp ACAGATGTTCTAAACACAAATGCGGCTGCTGACACCCTGACGCTGCAAACAACATGCACATCTTACTGGTaGCTTACGCCTTGGAGACAA +
Preference number: 4 (lower is better)
Translates to: TDVLNTNAAADTLTLQTTCTSYW*LTPWRQ
Trigger: TTGTCTCCAAGGCGTAAGTCACCAGTAAGATGTGCA...TGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAGAACATCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR TCA 90 bp CTAAACACAAATGCGGCTGCTGACACCCTGACGCTGCAAACAACAGCAAGGGCACCTTTTCGCTCTTTCTaGGACATTTTACTCTGGATT +
Preference number: 4 (lower is better)
Translates to: LNTNAAADTLTLQTTARAPFRSF*DILLWI
Trigger: AATCCAGAGTAAAATGTCTCAGAAAGAGCGAAAAGG...TGCCCTTGCTGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404929.6
CDS-3UTR TCA 90 bp CGGGAGGGTTGCAGTTACAAGGCACAGGGTTTACACCTGCACATCTTACTGGTGGTAAACATTTGCCCCTaGTGGAGAAAAATGACCTTA +
Preference number: 4 (lower is better)
Translates to: REGCSYKAQGLHLHILLVVNICP*WRKMTL
Trigger: TAAGGTCATTTTTCTCCATCAGGGGCAAATGTTTAC...CACCAGTAAGATGTGCAGGTGTAAACCCTGTGCCTTGTAACTGCAACCCTCCCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456262.5
CDS-3UTR GCA 90 bp GCACAGGGTTTACACCTGCACATCTTACTGGTGACTTACGCCTTGGAGACAAATCTCATAGCTTATCGGTaGATGTTCATCCACCCCAGA +
Preference number: 4 (lower is better)
Translates to: AQGLHLHILLVTYALETNLIAYR*MFIHPR
Trigger: TCTGGGGTGGATGAACATGCACCGATAAGCTATGAG...ATTTGTCTCCAAGGCGTAAGTCACCAGTAAGATGTGCAGGTGTAAACCCTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
CDS-3UTR GCA 90 bp ACAGATGTTCTAAACACAAATGCGGCTGCTGACACCCTGACGCTGCAAACAACACTCATAGCTTATCGGTaGATGTTCATCCACCCCAGA +
Preference number: 4 (lower is better)
Translates to: TDVLNTNAAADTLTLQTTLIAYR*MFIHPR
Trigger: TCTGGGGTGGATGAACATGCACCGATAAGCTATGAG...TGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAGAACATCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR GCA 90 bp CTTTTCTCCTTCAGAGACCTTCTCCGTTCTTCTTTTTGCTTGACTAAATCATGGCTGCTTTTCCCGGGCTaGTCGCTTCTGTTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: LFSFRDLLRSSFCLTKSWLLFPG*SLLFLP
Trigger: AGGGAGGAACAGAAGCGAGCAGCCCGGGAAAAGCAG...CCATGATTTAGTCAAGCAAAAAGAAGAACGGAGAAGGTCTCTGAAGGAGAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
CDS-3UTR GCA 90 bp AATAGGCAAAGCCTTACTCTAACTGATCAAATGACCAATCAGCTGGATTCAGGCAGAAAGTCTCTCAGCTaGTTTTCCCGGGCTGCTCGC +
Preference number: 4 (lower is better)
Translates to: NRQSLTLTDQMTNQLDSGRKSLS*FSRAAR
Trigger: GCGAGCAGCCCGGGAAAAGCAGCTGAGAGACTTTCT...GCCTGAATCCAGCTGATTGGTCATTTGATCAGTTAGAGTAAGGCTTTGCCTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR GCA 90 bp ACAGATGTTCTAAACACAAATGCGGCTGCTGACACCCTGACGCTGCAAACAACAGATGAGTTCTGTAAATaGTCCTGGGCTCTCAGCTGT +
Preference number: 4 (lower is better)
Translates to: TDVLNTNAAADTLTLQTTDEFCK*SWALSC
Trigger: ACAGCTGAGAGCCCAGGAGCATTTACAGAACTCATC...TGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAGAACATCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR GCA 90 bp AAACAACAGCAAGGGCATAGAGAGGAGACCTTGATGATTCAGTGTGATTCTTCAGACACCTGGGGTTCCTaGATCCACAAGCTGACCTAC +
Preference number: 4 (lower is better)
Translates to: KQQQGHREETLMIQCDSSDTWGS*IHKLTY
Trigger: GTAGGTCAGCTTGTGGATGCAGGAACCCCAGGTGTC...TGAAGAATCACACTGAATCATCAAGGTCTCCTCTCTATGCCCTTGCTGTTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418113.5
ENST00000456262.5
CDS-3UTR GCA 90 bp CTAAACACAAATGCGGCTGCTGACACCCTGACGCTGCAAACAACAGCAAGGGCATTCTGCTGCCATTCTTaGATTTTTCTGAGCAACTCT +
Preference number: 4 (lower is better)
Translates to: LNTNAAADTLTLQTTARAFCCHS*IFLSNS
Trigger: AGAGTTGCTCAGAAAAATGCAAGAATGGCAGCAGAA...TGCCCTTGCTGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR GCA 90 bp ACAGATGTTCTAAACACAAATGCGGCTGCTGACACCCTGACGCTGCAAACAACATTTGATCAACAGCCCTaGACATATCAGAAGCGTCCC +
Preference number: 4 (lower is better)
Translates to: TDVLNTNAAADTLTLQTTFDQQP*TYQKRP
Trigger: GGGACGCTTCTGATATGTGCAGGGCTGTTGATCAAA...TGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAGAACATCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR CCA 90 bp CTGAGAGGTGTTTCTGGTATCTCTCAGGAAGGTCCTCAAAATCAGGAGTTGGGCTACAAGGAGGAAGACTaGCCTAAATCAGGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: LRGVSGISQEGPQNQELGYKEED*PKSGSE
Trigger: TTCAGAGCCTGATTTAGGCCAGTCTTCCTCCTTGTA...GCCCAACTCCTGATTTTGAGGACCTTCCTGAGAGATACCAGAAACACCTCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307507.3
CDS-3UTR CCA 90 bp CTAAACACAAATGCGGCTGCTGACACCCTGACGCTGCAAACAACAGCAAGGGCAATGCAGGAACTGGATTaGCTCGGAATTTCTTCTTAT +
Preference number: 4 (lower is better)
Translates to: LNTNAAADTLTLQTTARAMQELD*LGISSY
Trigger: ATAAGAAGAAATTCCGAGCCAATCCAGTTCCTGCAT...TGCCCTTGCTGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR CCA 90 bp CTAAACACAAATGCGGCTGCTGACACCCTGACGCTGCAAACAACAGCAAGGGCAAAATCTGAATTACTTTaGAGACTTGCCCTAGCCAAG +
Preference number: 4 (lower is better)
Translates to: LNTNAAADTLTLQTTARAKSELL*RLALAK
Trigger: CTTGGCTAGGGCAAGTCTCCAAAGTAATTCAGATTT...TGCCCTTGCTGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR CCA 90 bp ACAGATGTTCTAAACACAAATGCGGCTGCTGACACCCTGACGCTGCAAACAACATACAAGGAGGAAGACTaGCCTAAATCAGGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: TDVLNTNAAADTLTLQTTYKEED*PKSGSG
Trigger: TCCAGAGCCTGATTTAGGCCAGTCTTCCTCCTTGTA...TGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAGAACATCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456262.5
CDS-3UTR TCA 90 bp GCTACAGATGACTTTGATCAACAGCCCTGCACATATCAGAAGCGTCCCCACAGACTTGTCATTGGTAGTTaGACCATAAGTAGATCGAGG +
Preference number: 4 (lower is better)
Translates to: ATDDFDQQPCTYQKRPHRLVIGS*TISRSR
Trigger: CCTCGATCTACTTATGGTTCAACTACCAATGACAAG...TCTGTGGGGACGCTTCTGATATGTGCAGGGCTGTTGATCAAAGTCATCTGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR GCA 90 bp AATAGGCAAAGCCTTACTCTAACTGATCAAATGACCAATCAGCTGGATTCAGGCGGGGAGAAAGACAGATaGAGGAACTGGATTGGCTCG +
Preference number: 4 (lower is better)
Translates to: NRQSLTLTDQMTNQLDSGGEKDR*RNWIGS
Trigger: CGAGCCAATCCAGTTCCTGCATCTGTCTTTCTCCCC...GCCTGAATCCAGCTGATTGGTCATTTGATCAGTTAGAGTAAGGCTTTGCCTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR GCA 90 bp CTAAACACAAATGCGGCTGCTGACACCCTGACGCTGCAAACAACAGCAAGGGCAAGATGCATGTGGAGATaGATGAAGATCAAATGGTTT +
Preference number: 4 (lower is better)
Translates to: LNTNAAADTLTLQTTARARCMWR*MKIKWF
Trigger: AAACCATTTGATCTTCATGCATCTCCACATGCATCT...TGCCCTTGCTGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR GCA 90 bp GAAGATACCGTGGGCACGGGAGGGTTGCAGTTACAAGGCACAGGGTTTACACCTTTCTCTTTTAATAGATaGATGTGGAGATGCATGAAG +
Preference number: 4 (lower is better)
Translates to: EDTVGTGGLQLQGTGFTPFSFNR*MWRCMK
Trigger: CTTCATGCATCTCCACATGCATCTATTAAAAGAGAA...AGGTGTAAACCCTGTGCCTTGTAACTGCAACCCTCCCGTGCCCACGGTATCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
CDS-3UTR GCA 90 bp AAACAACAGCAAGGGCATAGAGAGGAGACCTTGATGATTCAGTGTGATTCTTCATTCATGCCATTCTCCTaGCTCTGCCTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: KQQQGHREETLMIQCDSSFMPFS*LCLPSS
Trigger: GCTACTTGGGAGGCAGAGGCAGGAGAATGGCATGAA...TGAAGAATCACACTGAATCATCAAGGTCTCCTCTCTATGCCCTTGCTGTTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418113.5
ENST00000456262.5
CDS-3UTR GCA 90 bp CTAAACACAAATGCGGCTGCTGACACCCTGACGCTGCAAACAACAGCAAGGGCAATTACTTTGGAGACTTaGCCTAGCCAAGTTATTATG +
Preference number: 4 (lower is better)
Translates to: LNTNAAADTLTLQTTARAITLET*PSQVIM
Trigger: CATAATAACTTGGCTAGGGCAAGTCTCCAAAGTAAT...TGCCCTTGCTGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR CCA 90 bp ACAGATGTTCTAAACACAAATGCGGCTGCTGACACCCTGACGCTGCAAACAACAGCCATAGTTTCTATGTaGGCAGCCTTCAACTCTTCT +
Preference number: 4 (lower is better)
Translates to: TDVLNTNAAADTLTLQTTAIVSM*AAFNSS
Trigger: AGAAGAGTTGAAGGCTGCCCACATAGAAACTATGGC...TGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAGAACATCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR CCA 90 bp ACAGATGTTCTAAACACAAATGCGGCTGCTGACACCCTGACGCTGCAAACAACATACAAGGAGGAAGACTaGCCTAAATCAGGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: TDVLNTNAAADTLTLQTTYKEED*PKSGSE
Trigger: TTCAGAGCCTGATTTAGGCCAGTCTTCCTCCTTGTA...TGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAGAACATCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
CDS-3UTR CCA 90 bp GCTACAGATGACTTTGATCAACAGCCCTGCACATATCAGAAGCGTCCCCACAGAACTCTTTTTCTAGGTTaGGTAACTCCTCTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: ATDDFDQQPCTYQKRPHRTLFLG*VTPLQR
Trigger: CCTCTGAAGAGGAGTTACCCAACCTAGAAAAAGAGT...TCTGTGGGGACGCTTCTGATATGTGCAGGGCTGTTGATCAAAGTCATCTGTAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR CCA 90 bp ACAGATGTTCTAAACACAAATGCGGCTGCTGACACCCTGACGCTGCAAACAACAGACAGATGCAGGAACTaGATTGGCTCGGAATTTCTT +
Preference number: 4 (lower is better)
Translates to: TDVLNTNAAADTLTLQTTDRCRN*IGSEFL
Trigger: AAGAAATTCCGAGCCAATCCAGTTCCTGCATCTGTC...TGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAGAACATCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR TCA 90 bp GCTACAGATGACTTTGATCAACAGCCCTGCACATATCAGAAGCGTCCCCACAGATCCTCATTAGAGTGGTaGATATCAGGAAAGTTCACA +
Preference number: 4 (lower is better)
Translates to: ATDDFDQQPCTYQKRPHRSSLEW*ISGKFT
Trigger: TGTGAACTTTCCTGATATTCACCACTCTAATGAGGA...TCTGTGGGGACGCTTCTGATATGTGCAGGGCTGTTGATCAAAGTCATCTGTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR TCA 90 bp CTAGGATACTCTTTTTCTAGGTTGGGTAACTCCTCTTCAGAGGAGGACACATACTGCACATCTTACTGGTaGCTTACGCCTTGGAGACAA +
Preference number: 4 (lower is better)
Translates to: LGYSFSRLGNSSSEEDTYCTSYW*LTPWRQ
Trigger: TTGTCTCCAAGGCGTAAGTCACCAGTAAGATGTGCA...GTATGTGTCCTCCTCTGAAGAGGAGTTACCCAACCTAGAAAAAGAGTATCCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
CDS-3UTR TCA 90 bp ACAGATGTTCTAAACACAAATGCGGCTGCTGACACCCTGACGCTGCAAACAACATTTCTTTTCCTCAAGTaGTCTCCTTACGGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: TDVLNTNAAADTLTLQTTFLFLK*SPYGLF
Trigger: GAACAAGCCGTAAGGAGATCACTTGAGGAAAAGAAA...TGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAGAACATCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404929.6
ENST00000418113.5
CDS-3UTR TCA 90 bp GCTACAGATGACTTTGATCAACAGCCCTGCACATATCAGAAGCGTCCCCACAGAAAGCCTTACTCTAACTaGTCAAATGACCAATCAGCT +
Preference number: 4 (lower is better)
Translates to: ATDDFDQQPCTYQKRPHRKPYSN*SNDQSA
Trigger: AGCTGATTGGTCATTTGATCAGTTAGAGTAAGGCTT...TCTGTGGGGACGCTTCTGATATGTGCAGGGCTGTTGATCAAAGTCATCTGTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR TCA 90 bp GCTACAGATGACTTTGATCAACAGCCCTGCACATATCAGAAGCGTCCCCACAGAGTAAACATTTGCCCCTaGTGGAGAAAAATGACCTTA +
Preference number: 4 (lower is better)
Translates to: ATDDFDQQPCTYQKRPHRVNICP*WRKMTL
Trigger: TAAGGTCATTTTTCTCCATCAGGGGCAAATGTTTAC...TCTGTGGGGACGCTTCTGATATGTGCAGGGCTGTTGATCAAAGTCATCTGTAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR TCA 90 bp AAACAACAGCAAGGGCATAGAGAGGAGACCTTGATGATTCAGTGTGATTCTTCAAGCTTCCCGAATAGCTaGGATTACAGGTGTGCACCA +
Preference number: 4 (lower is better)
Translates to: KQQQGHREETLMIQCDSSSFPNS*DYRCAP
Trigger: TGGTGCACACCTGTAATCTCAGCTATTCGGGAAGCT...TGAAGAATCACACTGAATCATCAAGGTCTCCTCTCTATGCCCTTGCTGTTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418113.5
CDS-3UTR GCA 90 bp TACTCTTTTTCTAGGTTGGGTAACTCCTCTTCAGAGGAGGACACATACAAGGAGGATGAGTTCTGTAAATaGTCCTGGGCTCTCAGCTGT +
Preference number: 4 (lower is better)
Translates to: YSFSRLGNSSSEEDTYKEDEFCK*SWALSC
Trigger: ACAGCTGAGAGCCCAGGAGCATTTACAGAACTCATC...CTCCTTGTATGTGTCCTCCTCTGAAGAGGAGTTACCCAACCTAGAAAAAGAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
CDS-3UTR GCA 90 bp GCTACAGATGACTTTGATCAACAGCCCTGCACATATCAGAAGCGTCCCCACAGATTCTGCTGCCATTCTTaGATTTTTCTGAGCAACTCT +
Preference number: 4 (lower is better)
Translates to: ATDDFDQQPCTYQKRPHRFCCHS*IFLSNS
Trigger: AGAGTTGCTCAGAAAAATGCAAGAATGGCAGCAGAA...TCTGTGGGGACGCTTCTGATATGTGCAGGGCTGTTGATCAAAGTCATCTGTAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR GCA 90 bp AAACAACAGCAAGGGCATAGAGAGGAGACCTTGATGATTCAGTGTGATTCTTCATACCTCCTGGGTTCATaGAATTCTCGTGCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: KQQQGHREETLMIQCDSSYLLGS*NSRASA
Trigger: AGCTGAGGCACGAGAATTGCATGAACCCAGGAGGTA...TGAAGAATCACACTGAATCATCAAGGTCTCCTCTCTATGCCCTTGCTGTTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418113.5
CDS-3UTR CCA 90 bp GAATTACTTTGGAGACTTGCCCTAGCCAAGTTATTATGCACAATTTCATCATATGGATTTACCGGGGTCTaGAGACTGGAGGCCACCAGC +
Preference number: 4 (lower is better)
Translates to: ELLWRLALAKLLCTISSYGFTGV*RLEATS
Trigger: GCTGGTGGCCTCCAGTCTCCAGACCCCGGTAAATCC...ATATGATGAAATTGTGCATAATAACTTGGCTAGGGCAAGTCTCCAAAGTAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR CCA 90 bp AGGGGGAGAAAGACAGATGCAGGAACTGGATTGGCTCGGAATTTCTTCTTATACGCCATAGTTTCTATGTaGGCAGCCTTCAACTCTTCT +
Preference number: 4 (lower is better)
Translates to: RGRKTDAGTGLARNFFLYAIVSM*AAFNSS
Trigger: AGAAGAGTTGAAGGCTGCCCACATAGAAACTATGGC...GTATAAGAAGAAATTCCGAGCCAATCCAGTTCCTGCATCTGTCTTTCTCCCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
CDS-3UTR CCA 90 bp ACAGATGTTCTAAACACAAATGCGGCTGCTGACACCCTGACGCTGCAAACAACACTCAAAATCAGGAGTTaGGCACCTAACCTTGTGTTT +
Preference number: 4 (lower is better)
Translates to: TDVLNTNAAADTLTLQTTLKIRS*APNLVF
Trigger: AAACACAAGGTTAGGTGCCCAACTCCTGATTTTGAG...TGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAGAACATCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR CCA 90 bp GCTACAGATGACTTTGATCAACAGCCCTGCACATATCAGAAGCGTCCCCACAGAAAATCTGAATTACTTTaGAGACTTGCCCTAGCCAAG +
Preference number: 4 (lower is better)
Translates to: ATDDFDQQPCTYQKRPHRKSELL*RLALAK
Trigger: CTTGGCTAGGGCAAGTCTCCAAAGTAATTCAGATTT...TCTGTGGGGACGCTTCTGATATGTGCAGGGCTGTTGATCAAAGTCATCTGTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
3UTR CAA 72 bp GGAAGGTCCTCAAAATCAGGAGTTGGGCACCTAACCTaGTGTTTACACTTCAACTTTACAGCCTGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: GRSSKSGVGHLT*CLHFNFTACSG
Trigger: TCCTGAACAGGCTGTAAAGTTGAAGTGTAAACACAAGGTTAGGTGCCCAACTCCTGATTTTGAGGACCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
CDS-3UTR TCA 90 bp CATGAAGATCAAATGGTTTACACACTGTTAAGAGTTTTGGAGACTTGTGTTCTGGCACTTTGGGTCACTTaGGGTCAGGAATCCGAGACC +
Preference number: 4 (lower is better)
Translates to: HEDQMVYTLLRVLETCVLALWVT*GQESET
Trigger: GGTCTCGGATTCCTGACCTCAAGTGACCCAAAGTGC...CAGAACACAAGTCTCCAAAACTCTTAACAGTGTGTAAACCATTTGATCTTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307507.3
CDS-3UTR TCA 90 bp ACAGATGTTCTAAACACAAATGCGGCTGCTGACACCCTGACGCTGCAAACAACATCCTCATTAGAGTGGTaGATATCAGGAAAGTTCACA +
Preference number: 4 (lower is better)
Translates to: TDVLNTNAAADTLTLQTTSSLEW*ISGKFT
Trigger: TGTGAACTTTCCTGATATTCACCACTCTAATGAGGA...TGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAGAACATCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR TCA 90 bp GCTACAGATGACTTTGATCAACAGCCCTGCACATATCAGAAGCGTCCCCACAGATTTCTTTGTCTTCAGTaGCACTTTTCGTCTCTTGAT +
Preference number: 4 (lower is better)
Translates to: ATDDFDQQPCTYQKRPHRFLCLQ*HFSSLD
Trigger: ATCAAGAGACGAAAAGTGTCACTGAAGACAAAGAAA...TCTGTGGGGACGCTTCTGATATGTGCAGGGCTGTTGATCAAAGTCATCTGTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR GCA 90 bp GCTACAGATGACTTTGATCAACAGCCCTGCACATATCAGAAGCGTCCCCACAGAAGATGCATGTGGAGATaGATGAAGATCAAATGGTTT +
Preference number: 4 (lower is better)
Translates to: ATDDFDQQPCTYQKRPHRRCMWR*MKIKWF
Trigger: AAACCATTTGATCTTCATGCATCTCCACATGCATCT...TCTGTGGGGACGCTTCTGATATGTGCAGGGCTGTTGATCAAAGTCATCTGTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR GCA 90 bp GCTACAGATGACTTTGATCAACAGCCCTGCACATATCAGAAGCGTCCCCACAGAATTACTTTGGAGACTTaGCCTAGCCAAGTTATTATG +
Preference number: 4 (lower is better)
Translates to: ATDDFDQQPCTYQKRPHRITLET*PSQVIM
Trigger: CATAATAACTTGGCTAGGGCAAGTCTCCAAAGTAAT...TCTGTGGGGACGCTTCTGATATGTGCAGGGCTGTTGATCAAAGTCATCTGTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR CCA 90 bp ACAGATGTTCTAAACACAAATGCGGCTGCTGACACCCTGACGCTGCAAACAACAATGCAGGAACTGGATTaGCTCGGAATTTCTTCTTAT +
Preference number: 4 (lower is better)
Translates to: TDVLNTNAAADTLTLQTTMQELD*LGISSY
Trigger: ATAAGAAGAAATTCCGAGCCAATCCAGTTCCTGCAT...TGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAGAACATCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR CCA 90 bp AGGGGGAGAAAGACAGATGCAGGAACTGGATTGGCTCGGAATTTCTTCTTATACCTCAAAATCAGGAGTTaGGCACCTAACCTTGTGTTT +
Preference number: 4 (lower is better)
Translates to: RGRKTDAGTGLARNFFLYLKIRS*APNLVF
Trigger: AAACACAAGGTTAGGTGCCCAACTCCTGATTTTGAG...GTATAAGAAGAAATTCCGAGCCAATCCAGTTCCTGCATCTGTCTTTCTCCCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
CDS-3UTR CCA 90 bp GAATTACTTTGGAGACTTGCCCTAGCCAAGTTATTATGCACAATTTCATCATATCTCTGGAAGATACCGTaGGCACGGGAGGGTTGCAGT +
Preference number: 4 (lower is better)
Translates to: ELLWRLALAKLLCTISSYLWKIP*AREGCS
Trigger: ACTGCAACCCTCCCGTGCCCACGGTATCTTCCAGAG...ATATGATGAAATTGTGCATAATAACTTGGCTAGGGCAAGTCTCCAAAGTAATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
3UTR CAA 72 bp CGCTGCAAACAACAGCAAGGGCATAGAGAGGAGACCTaGATGATTCAGTGTGATTCTTCAACAGATTTCTCT +
Preference number: 4 (lower is better)
Translates to: RCKQQQGHREET*MIQCDSSTDFS
Trigger: AGAGAAATCTGTTGAAGAATCACACTGAATCATCAAGGTCTCCTCTCTATGCCCTTGCTGTTGTTTGCAGCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418113.5
ENST00000456262.5
CDS-3UTR TCA 90 bp GAATTACTTTGGAGACTTGCCCTAGCCAAGTTATTATGCACAATTTCATCATATCCTGCATCCACAAGCTaGCCTACAAGGCAGAGGAGA +
Preference number: 4 (lower is better)
Translates to: ELLWRLALAKLLCTISSYPASTS*PTRQRR
Trigger: TCTCCTCTGCCTTGTAGGTCAGCTTGTGGATGCAGG...ATATGATGAAATTGTGCATAATAACTTGGCTAGGGCAAGTCTCCAAAGTAATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR TCA 90 bp AATAGGCAAAGCCTTACTCTAACTGATCAAATGACCAATCAGCTGGATTCAGGCTGGAGACTTGTGTTCTaGGAGGTGTTTCTGGTATCT +
Preference number: 4 (lower is better)
Translates to: NRQSLTLTDQMTNQLDSGWRLVF*EVFLVS
Trigger: AGATACCAGAAACACCTCTCAGAACACAAGTCTCCA...GCCTGAATCCAGCTGATTGGTCATTTGATCAGTTAGAGTAAGGCTTTGCCTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR TCA 90 bp ACAGATGTTCTAAACACAAATGCGGCTGCTGACACCCTGACGCTGCAAACAACACTTGATGATTCAGTGTaGTTCTTCAACAGATTTCTC +
Preference number: 4 (lower is better)
Translates to: TDVLNTNAAADTLTLQTTLDDSV*FFNRFL
Trigger: GAGAAATCTGTTGAAGAATCACACTGAATCATCAAG...TGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAGAACATCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR TCA 90 bp GCACAGGGTTTACACCTGCACATCTTACTGGTGACTTACGCCTTGGAGACAAATCTTGATGATTCAGTGTaGTTCTTCAACAGATTTCTC +
Preference number: 4 (lower is better)
Translates to: AQGLHLHILLVTYALETNLDDSV*FFNRFL
Trigger: GAGAAATCTGTTGAAGAATCACACTGAATCATCAAG...ATTTGTCTCCAAGGCGTAAGTCACCAGTAAGATGTGCAGGTGTAAACCCTGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456262.5
CDS-3UTR GCA 90 bp CATGAAGATCAAATGGTTTACACACTGTTAAGAGTTTTGGAGACTTGTGTTCTGGGGGAGAAAGACAGATaGAGGAACTGGATTGGCTCG +
Preference number: 4 (lower is better)
Translates to: HEDQMVYTLLRVLETCVLGEKDR*RNWIGS
Trigger: CGAGCCAATCCAGTTCCTGCATCTGTCTTTCTCCCC...CAGAACACAAGTCTCCAAAACTCTTAACAGTGTGTAAACCATTTGATCTTCATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
CDS-3UTR GCA 90 bp GAATTACTTTGGAGACTTGCCCTAGCCAAGTTATTATGCACAATTTCATCATATAGAAAGTCTCTCAGCTaGTTTTCCCGGGCTGCTCGC +
Preference number: 4 (lower is better)
Translates to: ELLWRLALAKLLCTISSYRKSLS*FSRAAR
Trigger: GCGAGCAGCCCGGGAAAAGCAGCTGAGAGACTTTCT...ATATGATGAAATTGTGCATAATAACTTGGCTAGGGCAAGTCTCCAAAGTAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR GCA 90 bp ACAGATGTTCTAAACACAAATGCGGCTGCTGACACCCTGACGCTGCAAACAACAAGATGCATGTGGAGATaGATGAAGATCAAATGGTTT +
Preference number: 4 (lower is better)
Translates to: TDVLNTNAAADTLTLQTTRCMWR*MKIKWF
Trigger: AAACCATTTGATCTTCATGCATCTCCACATGCATCT...TGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAGAACATCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR CCA 90 bp TACAGATCTGGAAGAGTCACTAAGAGAGTCTTCTCTGATGACCACTGGCTGAACAAAAATCAACAGAATTaGCCAGGCACAGTGGTTCAT +
Preference number: 4 (lower is better)
Translates to: YRSGRVTKRVFSDDHWLNKNQQN*PGTVVH
Trigger: ATGAACCACTGTGCCTGGCCAATTCTGTTGATTTTT...GTTCAGCCAGTGGTCATCAGAGAAGACTCTCTTAGTGACTCTTCCAGATCTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307507.3
CDS-3UTR CCA 90 bp AATAGGCAAAGCCTTACTCTAACTGATCAAATGACCAATCAGCTGGATTCAGGCGCCATAGTTTCTATGTaGGCAGCCTTCAACTCTTCT +
Preference number: 4 (lower is better)
Translates to: NRQSLTLTDQMTNQLDSGAIVSM*AAFNSS
Trigger: AGAAGAGTTGAAGGCTGCCCACATAGAAACTATGGC...GCCTGAATCCAGCTGATTGGTCATTTGATCAGTTAGAGTAAGGCTTTGCCTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR CCA 90 bp AAACAACAGCAAGGGCATAGAGAGGAGACCTTGATGATTCAGTGTGATTCTTCAGCCATAGTTTCTATGTaGGCAGCCTTCAACTCTTCT +
Preference number: 4 (lower is better)
Translates to: KQQQGHREETLMIQCDSSAIVSM*AAFNSS
Trigger: AGAAGAGTTGAAGGCTGCCCACATAGAAACTATGGC...TGAAGAATCACACTGAATCATCAAGGTCTCCTCTCTATGCCCTTGCTGTTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418113.5
ENST00000456262.5
CDS-3UTR CCA 90 bp AAAGACAGATGCAGGAACTGGATTGGCTCGGAATTTCTTCTTATACTCTGGATCGACAGATGCAGGAACTaGATTGGCTCGGAATTTCTT +
Preference number: 4 (lower is better)
Translates to: KDRCRNWIGSEFLLILWIDRCRN*IGSEFL
Trigger: AAGAAATTCCGAGCCAATCCAGTTCCTGCATCTGTC...GATCCAGAGTATAAGAAGAAATTCCGAGCCAATCCAGTTCCTGCATCTGTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
CDS-3UTR CCA 90 bp GAATTACTTTGGAGACTTGCCCTAGCCAAGTTATTATGCACAATTTCATCATATGCAAGCTCTGCCTCCTaGGTTCATGCCATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: ELLWRLALAKLLCTISSYASSAS*VHAILL
Trigger: CAGGAGAATGGCATGAACCCAGGAGGCAGAGCTTGC...ATATGATGAAATTGTGCATAATAACTTGGCTAGGGCAAGTCTCCAAAGTAATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR TCA 90 bp CTAGGATACTCTTTTTCTAGGTTGGGTAACTCCTCTTCAGAGGAGGACACATACTCTCTTATCATCATTTaGAAAGGCTCCGGTACTGTA +
Preference number: 4 (lower is better)
Translates to: LGYSFSRLGNSSSEEDTYSLIII*KGSGTV
Trigger: TACAGTACCGGAGCCTTTTCAAATGATGATAAGAGA...GTATGTGTCCTCCTCTGAAGAGGAGTTACCCAACCTAGAAAAAGAGTATCCTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
CDS-3UTR TCA 90 bp AAGGTCCTCAAAATCAGGAGTTGGGCACCTAACCTTGTGTTTACACTTCAACTTCTTGTCATTGGTAGTTaGACCATAAGTAGATCGAGG +
Preference number: 4 (lower is better)
Translates to: KVLKIRSWAPNLVFTLQLLVIGS*TISRSR
Trigger: CCTCGATCTACTTATGGTTCAACTACCAATGACAAG...AAGTTGAAGTGTAAACACAAGGTTAGGTGCCCAACTCCTGATTTTGAGGACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
CDS-3UTR TCA 90 bp GATGCAGGAACTGGATTGGCTCGGAATTTCTTCTTATACTCTGGATCCTCTTCTAAGCCTTACTCTAACTaGTCAAATGACCAATCAGCT +
Preference number: 4 (lower is better)
Translates to: DAGTGLARNFFLYSGSSSKPYSN*SNDQSA
Trigger: AGCTGATTGGTCATTTGATCAGTTAGAGTAAGGCTT...AGAAGAGGATCCAGAGTATAAGAAGAAATTCCGAGCCAATCCAGTTCCTGCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456262.5
CDS-3UTR GCA 90 bp ACAGATGTTCTAAACACAAATGCGGCTGCTGACACCCTGACGCTGCAAACAACATTCTCTTTTAATAGATaGATGTGGAGATGCATGAAG +
Preference number: 4 (lower is better)
Translates to: TDVLNTNAAADTLTLQTTFSFNR*MWRCMK
Trigger: CTTCATGCATCTCCACATGCATCTATTAAAAGAGAA...TGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAGAACATCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR CCA 90 bp AATAGGCAAAGCCTTACTCTAACTGATCAAATGACCAATCAGCTGGATTCAGGCCTCAAAATCAGGAGTTaGGCACCTAACCTTGTGTTT +
Preference number: 4 (lower is better)
Translates to: NRQSLTLTDQMTNQLDSGLKIRS*APNLVF
Trigger: AAACACAAGGTTAGGTGCCCAACTCCTGATTTTGAG...GCCTGAATCCAGCTGATTGGTCATTTGATCAGTTAGAGTAAGGCTTTGCCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR CCA 90 bp AAACAACAGCAAGGGCATAGAGAGGAGACCTTGATGATTCAGTGTGATTCTTCACTCAAAATCAGGAGTTaGGCACCTAACCTTGTGTTT +
Preference number: 4 (lower is better)
Translates to: KQQQGHREETLMIQCDSSLKIRS*APNLVF
Trigger: AAACACAAGGTTAGGTGCCCAACTCCTGATTTTGAG...TGAAGAATCACACTGAATCATCAAGGTCTCCTCTCTATGCCCTTGCTGTTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418113.5
ENST00000456262.5
3UTR CAA 72 bp GGTTTACACCTGCACATCTTACTGGTGACTTACGCCTaGGAGACAAATAAGGCCAACGTGTTTCTTTTAAAT +
Preference number: 4 (lower is better)
Translates to: GLHLHILLVTYA*ETNKANVFLLN
Trigger: ATTTAAAAGAAACACGTTGGCCTTATTTGTCTCCAAGGCGTAAGTCACCAGTAAGATGTGCAGGTGTAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
CDS-3UTR TCA 90 bp AAAGACAGATGCAGGAACTGGATTGGCTCGGAATTTCTTCTTATACTCTGGATCTCCTCATTAGAGTGGTaGATATCAGGAAAGTTCACA +
Preference number: 4 (lower is better)
Translates to: KDRCRNWIGSEFLLILWISSLEW*ISGKFT
Trigger: TGTGAACTTTCCTGATATTCACCACTCTAATGAGGA...GATCCAGAGTATAAGAAGAAATTCCGAGCCAATCCAGTTCCTGCATCTGTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
CDS-3UTR TCA 90 bp AAACAACAGCAAGGGCATAGAGAGGAGACCTTGATGATTCAGTGTGATTCTTCATCCTCATTAGAGTGGTaGATATCAGGAAAGTTCACA +
Preference number: 4 (lower is better)
Translates to: KQQQGHREETLMIQCDSSSSLEW*ISGKFT
Trigger: TGTGAACTTTCCTGATATTCACCACTCTAATGAGGA...TGAAGAATCACACTGAATCATCAAGGTCTCCTCTCTATGCCCTTGCTGTTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418113.5
ENST00000456262.5
CDS-3UTR TCA 90 bp AATAGGCAAAGCCTTACTCTAACTGATCAAATGACCAATCAGCTGGATTCAGGCTCTCTTATCATCATTTaGAAAGGCTCCGGTACTGTA +
Preference number: 4 (lower is better)
Translates to: NRQSLTLTDQMTNQLDSGSLIII*KGSGTV
Trigger: TACAGTACCGGAGCCTTTTCAAATGATGATAAGAGA...GCCTGAATCCAGCTGATTGGTCATTTGATCAGTTAGAGTAAGGCTTTGCCTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR TCA 90 bp AGATCAAATGGTTTACACACTGTTAAGAGTTTTGGAGACTTGTGTTCTGAGAGGTGGAGACTTGTGTTCTaGGAGGTGTTTCTGGTATCT +
Preference number: 4 (lower is better)
Translates to: RSNGLHTVKSFGDLCSERWRLVF*EVFLVS
Trigger: AGATACCAGAAACACCTCTCAGAACACAAGTCTCCA...CCTCTCAGAACACAAGTCTCCAAAACTCTTAACAGTGTGTAAACCATTTGATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
CDS-3UTR TCA 90 bp CATGAAGATCAAATGGTTTACACACTGTTAAGAGTTTTGGAGACTTGTGTTCTGTGCACATCTTACTGGTaGCTTACGCCTTGGAGACAA +
Preference number: 4 (lower is better)
Translates to: HEDQMVYTLLRVLETCVLCTSYW*LTPWRQ
Trigger: TTGTCTCCAAGGCGTAAGTCACCAGTAAGATGTGCA...CAGAACACAAGTCTCCAAAACTCTTAACAGTGTGTAAACCATTTGATCTTCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
CDS-3UTR TCA 90 bp CTAGGATACTCTTTTTCTAGGTTGGGTAACTCCTCTTCAGAGGAGGACACATACTTTCTTTGTCTTCAGTaGCACTTTTCGTCTCTTGAT +
Preference number: 4 (lower is better)
Translates to: LGYSFSRLGNSSSEEDTYFLCLQ*HFSSLD
Trigger: ATCAAGAGACGAAAAGTGTCACTGAAGACAAAGAAA...GTATGTGTCCTCCTCTGAAGAGGAGTTACCCAACCTAGAAAAAGAGTATCCTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456262.5
CDS-3UTR TCA 90 bp AAACAACAGCAAGGGCATAGAGAGGAGACCTTGATGATTCAGTGTGATTCTTCAGTAAACATTTGCCCCTaGTGGAGAAAAATGACCTTA +
Preference number: 4 (lower is better)
Translates to: KQQQGHREETLMIQCDSSVNICP*WRKMTL
Trigger: TAAGGTCATTTTTCTCCATCAGGGGCAAATGTTTAC...TGAAGAATCACACTGAATCATCAAGGTCTCCTCTCTATGCCCTTGCTGTTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418113.5
ENST00000456262.5
CDS-3UTR GCA 90 bp AGGGGGAGAAAGACAGATGCAGGAACTGGATTGGCTCGGAATTTCTTCTTATACTTCTCTTTTAATAGATaGATGTGGAGATGCATGAAG +
Preference number: 4 (lower is better)
Translates to: RGRKTDAGTGLARNFFLYFSFNR*MWRCMK
Trigger: CTTCATGCATCTCCACATGCATCTATTAAAAGAGAA...GTATAAGAAGAAATTCCGAGCCAATCCAGTTCCTGCATCTGTCTTTCTCCCCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
CDS-3UTR CCA 90 bp AATAGGCAAAGCCTTACTCTAACTGATCAAATGACCAATCAGCTGGATTCAGGCATGCAGGAACTGGATTaGCTCGGAATTTCTTCTTAT +
Preference number: 4 (lower is better)
Translates to: NRQSLTLTDQMTNQLDSGMQELD*LGISSY
Trigger: ATAAGAAGAAATTCCGAGCCAATCCAGTTCCTGCAT...GCCTGAATCCAGCTGATTGGTCATTTGATCAGTTAGAGTAAGGCTTTGCCTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR CCA 90 bp AATAGGCAAAGCCTTACTCTAACTGATCAAATGACCAATCAGCTGGATTCAGGCAAATCTGAATTACTTTaGAGACTTGCCCTAGCCAAG +
Preference number: 4 (lower is better)
Translates to: NRQSLTLTDQMTNQLDSGKSELL*RLALAK
Trigger: CTTGGCTAGGGCAAGTCTCCAAAGTAATTCAGATTT...GCCTGAATCCAGCTGATTGGTCATTTGATCAGTTAGAGTAAGGCTTTGCCTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR CCA 90 bp AAGGTCCTCAAAATCAGGAGTTGGGCACCTAACCTTGTGTTTACACTTCAACTTAAATCTGAATTACTTTaGAGACTTGCCCTAGCCAAG +
Preference number: 4 (lower is better)
Translates to: KVLKIRSWAPNLVFTLQLKSELL*RLALAK
Trigger: CTTGGCTAGGGCAAGTCTCCAAAGTAATTCAGATTT...AAGTTGAAGTGTAAACACAAGGTTAGGTGCCCAACTCCTGATTTTGAGGACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456262.5
CDS-3UTR TCA 90 bp GAATTACTTTGGAGACTTGCCCTAGCCAAGTTATTATGCACAATTTCATCATATTGCACATCTTACTGGTaGCTTACGCCTTGGAGACAA +
Preference number: 4 (lower is better)
Translates to: ELLWRLALAKLLCTISSYCTSYW*LTPWRQ
Trigger: TTGTCTCCAAGGCGTAAGTCACCAGTAAGATGTGCA...ATATGATGAAATTGTGCATAATAACTTGGCTAGGGCAAGTCTCCAAAGTAATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR TCA 90 bp AATAGGCAAAGCCTTACTCTAACTGATCAAATGACCAATCAGCTGGATTCAGGCCTTGATGATTCAGTGTaGTTCTTCAACAGATTTCTC +
Preference number: 4 (lower is better)
Translates to: NRQSLTLTDQMTNQLDSGLDDSV*FFNRFL
Trigger: GAGAAATCTGTTGAAGAATCACACTGAATCATCAAG...GCCTGAATCCAGCTGATTGGTCATTTGATCAGTTAGAGTAAGGCTTTGCCTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR TCA 90 bp AAACAACAGCAAGGGCATAGAGAGGAGACCTTGATGATTCAGTGTGATTCTTCACTTGATGATTCAGTGTaGTTCTTCAACAGATTTCTC +
Preference number: 4 (lower is better)
Translates to: KQQQGHREETLMIQCDSSLDDSV*FFNRFL
Trigger: GAGAAATCTGTTGAAGAATCACACTGAATCATCAAG...TGAAGAATCACACTGAATCATCAAGGTCTCCTCTCTATGCCCTTGCTGTTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418113.5
ENST00000456262.5
CDS-3UTR GCA 90 bp GAATTACTTTGGAGACTTGCCCTAGCCAAGTTATTATGCACAATTTCATCATATCTCATAGCTTATCGGTaGATGTTCATCCACCCCAGA +
Preference number: 4 (lower is better)
Translates to: ELLWRLALAKLLCTISSYLIAYR*MFIHPR
Trigger: TCTGGGGTGGATGAACATGCACCGATAAGCTATGAG...ATATGATGAAATTGTGCATAATAACTTGGCTAGGGCAAGTCTCCAAAGTAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR GCA 90 bp GAATTACTTTGGAGACTTGCCCTAGCCAAGTTATTATGCACAATTTCATCATATGATGAGTTCTGTAAATaGTCCTGGGCTCTCAGCTGT +
Preference number: 4 (lower is better)
Translates to: ELLWRLALAKLLCTISSYDEFCK*SWALSC
Trigger: ACAGCTGAGAGCCCAGGAGCATTTACAGAACTCATC...ATATGATGAAATTGTGCATAATAACTTGGCTAGGGCAAGTCTCCAAAGTAATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR GCA 90 bp AAAGACAGATGCAGGAACTGGATTGGCTCGGAATTTCTTCTTATACTCTGGATCAGATGCATGTGGAGATaGATGAAGATCAAATGGTTT +
Preference number: 4 (lower is better)
Translates to: KDRCRNWIGSEFLLILWIRCMWR*MKIKWF
Trigger: AAACCATTTGATCTTCATGCATCTCCACATGCATCT...GATCCAGAGTATAAGAAGAAATTCCGAGCCAATCCAGTTCCTGCATCTGTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
CDS-3UTR GCA 90 bp AAACAACAGCAAGGGCATAGAGAGGAGACCTTGATGATTCAGTGTGATTCTTCAAGATGCATGTGGAGATaGATGAAGATCAAATGGTTT +
Preference number: 4 (lower is better)
Translates to: KQQQGHREETLMIQCDSSRCMWR*MKIKWF
Trigger: AAACCATTTGATCTTCATGCATCTCCACATGCATCT...TGAAGAATCACACTGAATCATCAAGGTCTCCTCTCTATGCCCTTGCTGTTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418113.5
ENST00000456262.5
CDS-3UTR GCA 90 bp GAATTACTTTGGAGACTTGCCCTAGCCAAGTTATTATGCACAATTTCATCATATTTTGATCAACAGCCCTaGACATATCAGAAGCGTCCC +
Preference number: 4 (lower is better)
Translates to: ELLWRLALAKLLCTISSYFDQQP*TYQKRP
Trigger: GGGACGCTTCTGATATGTGCAGGGCTGTTGATCAAA...ATATGATGAAATTGTGCATAATAACTTGGCTAGGGCAAGTCTCCAAAGTAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
3UTR CAA 72 bp TCAAATGGTTTACACACTGTTAAGAGTTTTGGAGACTaGTGTTCTGAGAGGTGTTTCTGGTATCTCTCAGGA +
Preference number: 4 (lower is better)
Translates to: SNGLHTVKSFGD*CSERCFWYLSG
Trigger: TCCTGAGAGATACCAGAAACACCTCTCAGAACACAAGTCTCCAAAACTCTTAACAGTGTGTAAACCATTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
CDS-3UTR TCA 90 bp AGATCAAATGGTTTACACACTGTTAAGAGTTTTGGAGACTTGTGTTCTGAGAGGTCTCTTATCATCATTTaGAAAGGCTCCGGTACTGTA +
Preference number: 4 (lower is better)
Translates to: RSNGLHTVKSFGDLCSERSLIII*KGSGTV
Trigger: TACAGTACCGGAGCCTTTTCAAATGATGATAAGAGA...CCTCTCAGAACACAAGTCTCCAAAACTCTTAACAGTGTGTAAACCATTTGATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
CDS-3UTR TCA 90 bp GAATTACTTTGGAGACTTGCCCTAGCCAAGTTATTATGCACAATTTCATCATATTGGAGACTTGTGTTCTaGGAGGTGTTTCTGGTATCT +
Preference number: 4 (lower is better)
Translates to: ELLWRLALAKLLCTISSYWRLVF*EVFLVS
Trigger: AGATACCAGAAACACCTCTCAGAACACAAGTCTCCA...ATATGATGAAATTGTGCATAATAACTTGGCTAGGGCAAGTCTCCAAAGTAATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR GCA 90 bp AAACAACAGCAAGGGCATAGAGAGGAGACCTTGATGATTCAGTGTGATTCTTCATTCTCTTTTAATAGATaGATGTGGAGATGCATGAAG +
Preference number: 4 (lower is better)
Translates to: KQQQGHREETLMIQCDSSFSFNR*MWRCMK
Trigger: CTTCATGCATCTCCACATGCATCTATTAAAAGAGAA...TGAAGAATCACACTGAATCATCAAGGTCTCCTCTCTATGCCCTTGCTGTTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418113.5
ENST00000456262.5
CDS-3UTR CCA 90 bp GAATTACTTTGGAGACTTGCCCTAGCCAAGTTATTATGCACAATTTCATCATATTACAAGGAGGAAGACTaGCCTAAATCAGGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: ELLWRLALAKLLCTISSYYKEED*PKSGSE
Trigger: TTCAGAGCCTGATTTAGGCCAGTCTTCCTCCTTGTA...ATATGATGAAATTGTGCATAATAACTTGGCTAGGGCAAGTCTCCAAAGTAATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
CDS-3UTR CCA 90 bp AGATCAAATGGTTTACACACTGTTAAGAGTTTTGGAGACTTGTGTTCTGAGAGGATGCAGGAACTGGATTaGCTCGGAATTTCTTCTTAT +
Preference number: 4 (lower is better)
Translates to: RSNGLHTVKSFGDLCSERMQELD*LGISSY
Trigger: ATAAGAAGAAATTCCGAGCCAATCCAGTTCCTGCAT...CCTCTCAGAACACAAGTCTCCAAAACTCTTAACAGTGTGTAAACCATTTGATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
CDS-3UTR CCA 90 bp GAATTACTTTGGAGACTTGCCCTAGCCAAGTTATTATGCACAATTTCATCATATGACAGATGCAGGAACTaGATTGGCTCGGAATTTCTT +
Preference number: 4 (lower is better)
Translates to: ELLWRLALAKLLCTISSYDRCRN*IGSEFL
Trigger: AAGAAATTCCGAGCCAATCCAGTTCCTGCATCTGTC...ATATGATGAAATTGTGCATAATAACTTGGCTAGGGCAAGTCTCCAAAGTAATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
3UTR CAA 72 bp CATGAAGATCAAATGGTTTACACACTGTTAAGAGTTTaGGAGACTTGTGTTCTGAGAGGTGTTTCTGGTATC +
Preference number: 4 (lower is better)
Translates to: HEDQMVYTLLRV*ETCVLRGVSGI
Trigger: GATACCAGAAACACCTCTCAGAACACAAGTCTCCAAAACTCTTAACAGTGTGTAAACCATTTGATCTTCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
CDS-3UTR CCA 90 bp TCTTTTAATAGATGCATGTGGAGATGCATGAAGATCAAATGGTTTACACACTGTACTCTTTTTCTAGGTTaGGTAACTCCTCTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: SFNRCMWRCMKIKWFTHCTLFLG*VTPLQR
Trigger: CCTCTGAAGAGGAGTTACCCAACCTAGAAAAAGAGT...ACAGTGTGTAAACCATTTGATCTTCATGCATCTCCACATGCATCTATTAAAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
CDS-3UTR GCA 90 bp GAATTACTTTGGAGACTTGCCCTAGCCAAGTTATTATGCACAATTTCATCATATTTCTGCTGCCATTCTTaGATTTTTCTGAGCAACTCT +
Preference number: 4 (lower is better)
Translates to: ELLWRLALAKLLCTISSYFCCHS*IFLSNS
Trigger: AGAGTTGCTCAGAAAAATGCAAGAATGGCAGCAGAA...ATATGATGAAATTGTGCATAATAACTTGGCTAGGGCAAGTCTCCAAAGTAATTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR GCA 90 bp CATGAAGATCAAATGGTTTACACACTGTTAAGAGTTTTGGAGACTTGTGTTCTGATTACTTTGGAGACTTaGCCTAGCCAAGTTATTATG +
Preference number: 4 (lower is better)
Translates to: HEDQMVYTLLRVLETCVLITLET*PSQVIM
Trigger: CATAATAACTTGGCTAGGGCAAGTCTCCAAAGTAAT...CAGAACACAAGTCTCCAAAACTCTTAACAGTGTGTAAACCATTTGATCTTCATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456262.5
CDS-3UTR GCA 90 bp CATGAAGATCAAATGGTTTACACACTGTTAAGAGTTTTGGAGACTTGTGTTCTGTGTCTGAATCCAGTATaGAGTTTTCACTCGAAAAAT +
Preference number: 4 (lower is better)
Translates to: HEDQMVYTLLRVLETCVLCLNPV*SFHSKN
Trigger: ATTTTTCGAGTGAAAACTGCATACTGGATTCAGACA...CAGAACACAAGTCTCCAAAACTCTTAACAGTGTGTAAACCATTTGATCTTCATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000307507.3
CDS CCA 90 bp TGGGAGGTGGCCATCGCCCCGCCTCCGAGGCCTGAGCGCCTGCGCTaGCCCGGGACGGGAAAGCTGGTGCGGCCCCTGGCAACCCGGGGG +
Preference number: 5 (lower is better)
Translates to: WEVAIAPPPRPERLR*PGTGKLVRPLATRG
Trigger: CCCCCGGGTTGCCAGGGGCCGCACCAGCTTTCCCGTCCCGGGCCAGCGCAGGCGCTCAGGCCTCGGAGGCGGGGCGATGGCCACCTCCCA
78% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405894.3
CDS GCA 90 bp CTCGGTGGGAGGTGGCCATCGCCCCGCCTCCGAGGCCTGAGCGCCTaGGCTGGCCCGGGACGGGAAAGCTGGTGCGGCCCCTGGCAACCC +
Preference number: 5 (lower is better)
Translates to: LGGRWPSPRLRGLSA*AGPGRESWCGPWQP
Trigger: GGGTTGCCAGGGGCCGCACCAGCTTTCCCGTCCCGGGCCAGCGCAGGCGCTCAGGCCTCGGAGGCGGGGCGATGGCCACCTCCCACCGAG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405894.3
CDS TCA 90 bp CTTCGCCACTCGGTGGGAGGTGGCCATCGCCCCGCCTCCGAGGCCTaGGCGCCTGCGCTGGCCCGGGACGGGAAAGCTGGTGCGGCCCCT +
Preference number: 5 (lower is better)
Translates to: LRHSVGGGHRPASEA*APALARDGKAGAAP
Trigger: AGGGGCCGCACCAGCTTTCCCGTCCCGGGCCAGCGCAGGCGCTCAGGCCTCGGAGGCGGGGCGATGGCCACCTCCCACCGAGTGGCGAAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405894.3
CDS CCA 90 bp GCCTCCGCTGCCGCCAGGGCCTTTAAGGGGTCTTCGCGTTCGTACTaGGCGACCCGCGCTCCAGTGATGGGATTTACCGGGGTCTGGAGA +
Preference number: 5 (lower is better)
Translates to: ASAAARAFKGSSRSY*ATRAPVMGFTGVWR
Trigger: TCTCCAGACCCCGGTAAATCCCATCACTGGAGCGCGGGTCGCCCAGTACGAACGCGAAGACCCCTTAAAGGCCCTGGCGGCAGCGGAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307507.3
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS TCA 90 bp CCTTTAAGGGGTCTTCGCGTTCGTACTGGGCGACCCGCGCTCCAGTaGTGGGATTTACCGGGGTCTGGAGACTGGAGGCCACCAGCTTCG +
Preference number: 5 (lower is better)
Translates to: PLRGLRVRTGRPALQ*WDLPGSGDWRPPAS
Trigger: CGAAGCTGGTGGCCTCCAGTCTCCAGACCCCGGTAAATCCCATCACTGGAGCGCGGGTCGCCCAGTACGAACGCGAAGACCCCTTAAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307507.3
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS TCA 90 bp GGGTCACTTGAGGTCAGGAATCCGAGACCAATCTGGCCAACATGGTaGAACCCCATCTCGATGCCCCAGCGGGCTGAGCCACTTTCTCCT +
Preference number: 5 (lower is better)
Translates to: GSLEVRNPRPIWPTW*NPISMPQRAEPLSP
Trigger: AGGAGAAAGTGGCTCAGCCCGCTGGGGCATCGAGATGGGGTTTCACCATGTTGGCCAGATTGGTCTCGGATTCCTGACCTCAAGTGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307507.3
CDS-3UTR CAA 90 bp CTAAACACAAATGCGGCTGCTGACACCCTGACGCTGCAAACAACAGCAAGGGCAGTGGGCACGGGAGGGTaGCAGTTACAAGGCACAGGG +
Preference number: 5 (lower is better)
Translates to: LNTNAAADTLTLQTTARAVGTGG*QLQGTG
Trigger: CCCTGTGCCTTGTAACTGCAACCCTCCCGTGCCCAC...TGCCCTTGCTGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS CCA 90 bp CAAGTGATCTCCTTACGGCTTGTTCTCGTCCTCTGGAAGATACCGTaGGCACGGGAGGGTTGCAGTTACAAGGCACAGGGTTTACACCTG +
Preference number: 5 (lower is better)
Translates to: QVISLRLVLVLWKIP*AREGCSYKAQGLHL
Trigger: CAGGTGTAAACCCTGTGCCTTGTAACTGCAACCCTCCCGTGCCCACGGTATCTTCCAGAGGACGAGAACAAGCCGTAAGGAGATCACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404929.6
ENST00000418113.5
CDS-3UTR CAA 90 bp GCACAGGGTTTACACCTGCACATCTTACTGGTGACTTACGCCTTGGAGACAAATGTGGGCACGGGAGGGTaGCAGTTACAAGGCACAGGG +
Preference number: 5 (lower is better)
Translates to: AQGLHLHILLVTYALETNVGTGG*QLQGTG
Trigger: CCCTGTGCCTTGTAACTGCAACCCTCCCGTGCCCAC...ATTTGTCTCCAAGGCGTAAGTCACCAGTAAGATGTGCAGGTGTAAACCCTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
CDS-3UTR CAA 90 bp TACAGATCTGGAAGAGTCACTAAGAGAGTCTTCTCTGATGACCACTGGCTGAACGTGGGCACGGGAGGGTaGCAGTTACAAGGCACAGGG +
Preference number: 5 (lower is better)
Translates to: YRSGRVTKRVFSDDHWLNVGTGG*QLQGTG
Trigger: CCCTGTGCCTTGTAACTGCAACCCTCCCGTGCCCAC...GTTCAGCCAGTGGTCATCAGAGAAGACTCTCTTAGTGACTCTTCCAGATCTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307507.3
CDS-3UTR CAA 90 bp GAAGATACCGTGGGCACGGGAGGGTTGCAGTTACAAGGCACAGGGTTTACACCTGCCAAAAGAGCTTCTTaGCTTTTCTCCTTCAGAGAC +
Preference number: 5 (lower is better)
Translates to: EDTVGTGGLQLQGTGFTPAKRAS*LFSFRD
Trigger: GTCTCTGAAGGAGAAAAGCAAAGAAGCTCTTTTGGC...AGGTGTAAACCCTGTGCCTTGTAACTGCAACCCTCCCGTGCCCACGGTATCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
CDS-3UTR CAA 90 bp AATAGGCAAAGCCTTACTCTAACTGATCAAATGACCAATCAGCTGGATTCAGGCGTGGGCACGGGAGGGTaGCAGTTACAAGGCACAGGG +
Preference number: 5 (lower is better)
Translates to: NRQSLTLTDQMTNQLDSGVGTGG*QLQGTG
Trigger: CCCTGTGCCTTGTAACTGCAACCCTCCCGTGCCCAC...GCCTGAATCCAGCTGATTGGTCATTTGATCAGTTAGAGTAAGGCTTTGCCTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR CAA 90 bp CTAAACACAAATGCGGCTGCTGACACCCTGACGCTGCAAACAACAGCAAGGGCAGCCAAAAGAGCTTCTTaGCTTTTCTCCTTCAGAGAC +
Preference number: 5 (lower is better)
Translates to: LNTNAAADTLTLQTTARAAKRAS*LFSFRD
Trigger: GTCTCTGAAGGAGAAAAGCAAAGAAGCTCTTTTGGC...TGCCCTTGCTGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR CAA 90 bp GCTACAGATGACTTTGATCAACAGCCCTGCACATATCAGAAGCGTCCCCACAGACTGGTGACTTACGCCTaGGAGACAAATAAGGCCAAC +
Preference number: 5 (lower is better)
Translates to: ATDDFDQQPCTYQKRPHRLVTYA*ETNKAN
Trigger: GTTGGCCTTATTTGTCTCCAAGGCGTAAGTCACCAG...TCTGTGGGGACGCTTCTGATATGTGCAGGGCTGTTGATCAAAGTCATCTGTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR CAA 90 bp GAAGATACCGTGGGCACGGGAGGGTTGCAGTTACAAGGCACAGGGTTTACACCTTTCTCTTATCATCATTaGAAAAGGCTCCGGTACTGT +
Preference number: 5 (lower is better)
Translates to: EDTVGTGGLQLQGTGFTPFSYHH*KRLRYC
Trigger: ACAGTACCGGAGCCTTTTCAAATGATGATAAGAGAA...AGGTGTAAACCCTGTGCCTTGTAACTGCAACCCTCCCGTGCCCACGGTATCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
CDS-3UTR CAA 90 bp ACGGGAGGGTTGCAGTTACAAGGCACAGGGTTTACACCTGCACATCTTACTGGTGATGCAGGAACTGGATaGGCTCGGAATTTCTTCTTA +
Preference number: 5 (lower is better)
Translates to: TGGLQLQGTGFTPAHLTGDAGTG*ARNFFL
Trigger: TAAGAAGAAATTCCGAGCCAATCCAGTTCCTGCATC...ACCAGTAAGATGTGCAGGTGTAAACCCTGTGCCTTGTAACTGCAACCCTCCCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
CDS-3UTR CAA 90 bp CAAGGCACAGGGTTTACACCTGCACATCTTACTGGTGACTTACGCCTTGGAGACGCCAAAAGAGCTTCTTaGCTTTTCTCCTTCAGAGAC +
Preference number: 5 (lower is better)
Translates to: QGTGFTPAHLTGDLRLGDAKRAS*LFSFRD
Trigger: GTCTCTGAAGGAGAAAAGCAAAGAAGCTCTTTTGGC...GTCTCCAAGGCGTAAGTCACCAGTAAGATGTGCAGGTGTAAACCCTGTGCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
CDS-3UTR CAA 90 bp CTAAACACAAATGCGGCTGCTGACACCCTGACGCTGCAAACAACAGCAAGGGCAGTTGGGCACCTAACCTaGTGTTTACACTTCAACTTT +
Preference number: 5 (lower is better)
Translates to: LNTNAAADTLTLQTTARAVGHLT*CLHFNF
Trigger: AAAGTTGAAGTGTAAACACAAGGTTAGGTGCCCAAC...TGCCCTTGCTGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR CAA 90 bp CTAAACACAAATGCGGCTGCTGACACCCTGACGCTGCAAACAACAGCAAGGGCAAAGAGTTTTGGAGACTaGTGTTCTGAGAGGTGTTTC +
Preference number: 5 (lower is better)
Translates to: LNTNAAADTLTLQTTARAKSFGD*CSERCF
Trigger: GAAACACCTCTCAGAACACAAGTCTCCAAAACTCTT...TGCCCTTGCTGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR CAA 90 bp ACAGATGTTCTAAACACAAATGCGGCTGCTGACACCCTGACGCTGCAAACAACACTGGTGACTTACGCCTaGGAGACAAATAAGGCCAAC +
Preference number: 5 (lower is better)
Translates to: TDVLNTNAAADTLTLQTTLVTYA*ETNKAN
Trigger: GTTGGCCTTATTTGTCTCCAAGGCGTAAGTCACCAG...TGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAGAACATCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR CAA 90 bp ACAGATGTTCTAAACACAAATGCGGCTGCTGACACCCTGACGCTGCAAACAACAGCTCTTTCTTACGGCTaGTTCTCGTCCTCTGGAAGA +
Preference number: 5 (lower is better)
Translates to: TDVLNTNAAADTLTLQTTALSYG*FSSSGR
Trigger: TCTTCCAGAGGACGAGAACAAGCCGTAAGAAAGAGC...TGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAGAACATCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405894.3
ENST00000456262.5
CDS-3UTR CAA 90 bp CTAAACACAAATGCGGCTGCTGACACCCTGACGCTGCAAACAACAGCAAGGGCATTTCTGCTGCCATTCTaGCATTTTTCTGAGCAACTC +
Preference number: 5 (lower is better)
Translates to: LNTNAAADTLTLQTTARAFLLPF*HFSEQL
Trigger: GAGTTGCTCAGAAAAATGCAAGAATGGCAGCAGAAA...TGCCCTTGCTGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR CAA 90 bp AATAGGCAAAGCCTTACTCTAACTGATCAAATGACCAATCAGCTGGATTCAGGCTGGAGTCTCATTCTGTaGCTCAGGCTGGTGCGGTGG +
Preference number: 5 (lower is better)
Translates to: NRQSLTLTDQMTNQLDSGWSLIL*LRLVRW
Trigger: CCACCGCACCAGCCTGAGCAACAGAATGAGACTCCA...GCCTGAATCCAGCTGATTGGTCATTTGATCAGTTAGAGTAAGGCTTTGCCTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418113.5
CDS-3UTR CAA 90 bp TACAGATCTGGAAGAGTCACTAAGAGAGTCTTCTCTGATGACCACTGGCTGAACTGTAATCCCAGCACTTaGGGTCACTTGAGGTCAGGA +
Preference number: 5 (lower is better)
Translates to: YRSGRVTKRVFSDDHWLNCNPST*GHLRSG
Trigger: TCCTGACCTCAAGTGACCCAAAGTGCTGGGATTACA...GTTCAGCCAGTGGTCATCAGAGAAGACTCTCTTAGTGACTCTTCCAGATCTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307507.3
CDS-3UTR CAA 90 bp CTAAACACAAATGCGGCTGCTGACACCCTGACGCTGCAAACAACAGCAAGGGCATTCTCTTATCATCATTaGAAAAGGCTCCGGTACTGT +
Preference number: 5 (lower is better)
Translates to: LNTNAAADTLTLQTTARAFSYHH*KRLRYC
Trigger: ACAGTACCGGAGCCTTTTCAAATGATGATAAGAGAA...TGCCCTTGCTGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR CAA 90 bp TACAGATCTGGAAGAGTCACTAAGAGAGTCTTCTCTGATGACCACTGGCTGAACCTGGTGACTTACGCCTaGGAGACAAATAAGGCCAAC +
Preference number: 5 (lower is better)
Translates to: YRSGRVTKRVFSDDHWLNLVTYA*ETNKAN
Trigger: GTTGGCCTTATTTGTCTCCAAGGCGTAAGTCACCAG...GTTCAGCCAGTGGTCATCAGAGAAGACTCTCTTAGTGACTCTTCCAGATCTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307507.3
CDS-3UTR CAA 90 bp GCTACAGATGACTTTGATCAACAGCCCTGCACATATCAGAAGCGTCCCCACAGATACTCTTTTTCTAGGTaGGGTAACTCCTCTTCAGAG +
Preference number: 5 (lower is better)
Translates to: ATDDFDQQPCTYQKRPHRYSFSR*GNSSSE
Trigger: CTCTGAAGAGGAGTTACCCAACCTAGAAAAAGAGTA...TCTGTGGGGACGCTTCTGATATGTGCAGGGCTGTTGATCAAAGTCATCTGTAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR CAA 90 bp ACAGATGTTCTAAACACAAATGCGGCTGCTGACACCCTGACGCTGCAAACAACAGATGCAGGAACTGGATaGGCTCGGAATTTCTTCTTA +
Preference number: 5 (lower is better)
Translates to: TDVLNTNAAADTLTLQTTDAGTG*ARNFFL
Trigger: TAAGAAGAAATTCCGAGCCAATCCAGTTCCTGCATC...TGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAGAACATCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR CAA 90 bp GCTACAGATGACTTTGATCAACAGCCCTGCACATATCAGAAGCGTCCCCACAGAGTTGGGCACCTAACCTaGTGTTTACACTTCAACTTT +
Preference number: 5 (lower is better)
Translates to: ATDDFDQQPCTYQKRPHRVGHLT*CLHFNF
Trigger: AAAGTTGAAGTGTAAACACAAGGTTAGGTGCCCAAC...TCTGTGGGGACGCTTCTGATATGTGCAGGGCTGTTGATCAAAGTCATCTGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR CAA 90 bp GCTACAGATGACTTTGATCAACAGCCCTGCACATATCAGAAGCGTCCCCACAGAAAGAGTTTTGGAGACTaGTGTTCTGAGAGGTGTTTC +
Preference number: 5 (lower is better)
Translates to: ATDDFDQQPCTYQKRPHRKSFGD*CSERCF
Trigger: GAAACACCTCTCAGAACACAAGTCTCCAAAACTCTT...TCTGTGGGGACGCTTCTGATATGTGCAGGGCTGTTGATCAAAGTCATCTGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR CAA 90 bp CTAGGATACTCTTTTTCTAGGTTGGGTAACTCCTCTTCAGAGGAGGACACATACCTGGTGACTTACGCCTaGGAGACAAATAAGGCCAAC +
Preference number: 5 (lower is better)
Translates to: LGYSFSRLGNSSSEEDTYLVTYA*ETNKAN
Trigger: GTTGGCCTTATTTGTCTCCAAGGCGTAAGTCACCAG...GTATGTGTCCTCCTCTGAAGAGGAGTTACCCAACCTAGAAAAAGAGTATCCTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
CDS-3UTR CAA 90 bp GAATTACTTTGGAGACTTGCCCTAGCCAAGTTATTATGCACAATTTCATCATATGTGGGCACGGGAGGGTaGCAGTTACAAGGCACAGGG +
Preference number: 5 (lower is better)
Translates to: ELLWRLALAKLLCTISSYVGTGG*QLQGTG
Trigger: CCCTGTGCCTTGTAACTGCAACCCTCCCGTGCCCAC...ATATGATGAAATTGTGCATAATAACTTGGCTAGGGCAAGTCTCCAAAGTAATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR CAA 90 bp GCTACAGATGACTTTGATCAACAGCCCTGCACATATCAGAAGCGTCCCCACAGATTTCTGCTGCCATTCTaGCATTTTTCTGAGCAACTC +
Preference number: 5 (lower is better)
Translates to: ATDDFDQQPCTYQKRPHRFLLPF*HFSEQL
Trigger: GAGTTGCTCAGAAAAATGCAAGAATGGCAGCAGAAA...TCTGTGGGGACGCTTCTGATATGTGCAGGGCTGTTGATCAAAGTCATCTGTAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS GCA 90 bp GTGGTGAATATCAGGAAAGTTCACAAAGTCCTCATAGCTTATCGGTaGATGTTCATCCACCCCAGAAAAGCTGGTGTTCAAATCAGCCGA +
Preference number: 5 (lower is better)
Translates to: VVNIRKVHKVLIAYR*MFIHPRKAGVQISR
Trigger: TCGGCTGATTTGAACACCAGCTTTTCTGGGGTGGATGAACATGCACCGATAAGCTATGAGGACTTTGTGAACTTTCCTGATATTCACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR CAA 90 bp TTACAAGGCACAGGGTTTACACCTGCACATCTTACTGGTGACTTACGCCTTGGAAAGTCTGTCCACATATaGTTGATGAGCTCCTTAGCA +
Preference number: 5 (lower is better)
Translates to: LQGTGFTPAHLTGDLRLGKSVHI*LMSSLA
Trigger: TGCTAAGGAGCTCATCAACAATATGTGGACAGACTT...TCCAAGGCGTAAGTCACCAGTAAGATGTGCAGGTGTAAACCCTGTGCCTTGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
CDS-3UTR CAA 90 bp GCTACAGATGACTTTGATCAACAGCCCTGCACATATCAGAAGCGTCCCCACAGATTCTCTTATCATCATTaGAAAAGGCTCCGGTACTGT +
Preference number: 5 (lower is better)
Translates to: ATDDFDQQPCTYQKRPHRFSYHH*KRLRYC
Trigger: ACAGTACCGGAGCCTTTTCAAATGATGATAAGAGAA...TCTGTGGGGACGCTTCTGATATGTGCAGGGCTGTTGATCAAAGTCATCTGTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR CAA 90 bp AGCAACGGTTATTCATCTGGGCAGCAGCAGTTCGTTTTAGTAGCAGTGTCTGAAGATGCAGGAACTGGATaGGCTCGGAATTTCTTCTTA +
Preference number: 5 (lower is better)
Translates to: SNGYSSGQQQFVLVAVSEDAGTG*ARNFFL
Trigger: TAAGAAGAAATTCCGAGCCAATCCAGTTCCTGCATC...TTCAGACACTGCTACTAAAACGAACTGCTGCTGCCCAGATGAATAACCGTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307507.3
CDS-3UTR CAA 90 bp TGCAGTTACAAGGCACAGGGTTTACACCTGCACATCTTACTGGTGACTTACGCCACACTGTTAAGAGTTTaGGAGACTTGTGTTCTGAGA +
Preference number: 5 (lower is better)
Translates to: CSYKAQGLHLHILLVTYATLLRV*ETCVLR
Trigger: TCTCAGAACACAAGTCTCCAAAACTCTTAACAGTGT...GGCGTAAGTCACCAGTAAGATGTGCAGGTGTAAACCCTGTGCCTTGTAACTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
CDS-3UTR CAA 90 bp AAACAACAGCAAGGGCATAGAGAGGAGACCTTGATGATTCAGTGTGATTCTTCACTGGTGACTTACGCCTaGGAGACAAATAAGGCCAAC +
Preference number: 5 (lower is better)
Translates to: KQQQGHREETLMIQCDSSLVTYA*ETNKAN
Trigger: GTTGGCCTTATTTGTCTCCAAGGCGTAAGTCACCAG...TGAAGAATCACACTGAATCATCAAGGTCTCCTCTCTATGCCCTTGCTGTTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418113.5
ENST00000456262.5
CDS-3UTR CAA 90 bp AAGGTCCTCAAAATCAGGAGTTGGGCACCTAACCTTGTGTTTACACTTCAACTTGCTCTTTCTTACGGCTaGTTCTCGTCCTCTGGAAGA +
Preference number: 5 (lower is better)
Translates to: KVLKIRSWAPNLVFTLQLALSYG*FSSSGR
Trigger: TCTTCCAGAGGACGAGAACAAGCCGTAAGAAAGAGC...AAGTTGAAGTGTAAACACAAGGTTAGGTGCCCAACTCCTGATTTTGAGGACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
CDS-3UTR CAA 90 bp ATGCTCCTGGGCTCTCAGCTGTGTCCTAAGGTTTCGATAGAGCTCTTCTTCTTTTTTCTGCTGCCATTCTaGCATTTTTCTGAGCAACTC +
Preference number: 5 (lower is better)
Translates to: MLLGSQLCPKVSIELFFFFLLPF*HFSEQL
Trigger: GAGTTGCTCAGAAAAATGCAAGAATGGCAGCAGAAA...AAAGAAGAAGAGCTCTATCGAAACCTTAGGACACAGCTGAGAGCCCAGGAGCAT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000456262.5
CDS-3UTR CAA 90 bp ACAGATGTTCTAAACACAAATGCGGCTGCTGACACCCTGACGCTGCAAACAACATTCTCTTATCATCATTaGAAAAGGCTCCGGTACTGT +
Preference number: 5 (lower is better)
Translates to: TDVLNTNAAADTLTLQTTFSYHH*KRLRYC
Trigger: ACAGTACCGGAGCCTTTTCAAATGATGATAAGAGAA...TGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAGAACATCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR CAA 90 bp TGCAGTTACAAGGCACAGGGTTTACACCTGCACATCTTACTGGTGACTTACGCCTCCTCTTCTTGTTTTTaGAGCGCTTTATGTACCATT +
Preference number: 5 (lower is better)
Translates to: CSYKAQGLHLHILLVTYASSSCF*SALCTI
Trigger: AATGGTACATAAAGCGCTCAAAAAACAAGAAGAGGA...GGCGTAAGTCACCAGTAAGATGTGCAGGTGTAAACCCTGTGCCTTGTAACTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
CDS-3UTR CAA 90 bp ACAGATGTTCTAAACACAAATGCGGCTGCTGACACCCTGACGCTGCAAACAACAACACTGTTAAGAGTTTaGGAGACTTGTGTTCTGAGA +
Preference number: 5 (lower is better)
Translates to: TDVLNTNAAADTLTLQTTTLLRV*ETCVLR
Trigger: TCTCAGAACACAAGTCTCCAAAACTCTTAACAGTGT...TGTTGTTTGCAGCGTCAGGGTGTCAGCAGCCGCATTTGTGTTTAGAACATCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR CAA 90 bp CTTTTCTCCTTCAGAGACCTTCTCCGTTCTTCTTTTTGCTTGACTAAATCATGGGCTCTTTCTTACGGCTaGTTCTCGTCCTCTGGAAGA +
Preference number: 5 (lower is better)
Translates to: LFSFRDLLRSSFCLTKSWALSYG*FSSSGR
Trigger: TCTTCCAGAGGACGAGAACAAGCCGTAAGAAAGAGC...CCATGATTTAGTCAAGCAAAAAGAAGAACGGAGAAGGTCTCTGAAGGAGAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
CDS-3UTR CAA 90 bp TACTCTTTTTCTAGGTTGGGTAACTCCTCTTCAGAGGAGGACACATACAAGGAGTACTCTTTTTCTAGGTaGGGTAACTCCTCTTCAGAG +
Preference number: 5 (lower is better)
Translates to: YSFSRLGNSSSEEDTYKEYSFSR*GNSSSE
Trigger: CTCTGAAGAGGAGTTACCCAACCTAGAAAAAGAGTA...CTCCTTGTATGTGTCCTCCTCTGAAGAGGAGTTACCCAACCTAGAAAAAGAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
CDS-3UTR CAA 90 bp AATAGGCAAAGCCTTACTCTAACTGATCAAATGACCAATCAGCTGGATTCAGGCGATGCAGGAACTGGATaGGCTCGGAATTTCTTCTTA +
Preference number: 5 (lower is better)
Translates to: NRQSLTLTDQMTNQLDSGDAGTG*ARNFFL
Trigger: TAAGAAGAAATTCCGAGCCAATCCAGTTCCTGCATC...GCCTGAATCCAGCTGATTGGTCATTTGATCAGTTAGAGTAAGGCTTTGCCTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR CAA 90 bp AAACAACAGCAAGGGCATAGAGAGGAGACCTTGATGATTCAGTGTGATTCTTCAGATGCAGGAACTGGATaGGCTCGGAATTTCTTCTTA +
Preference number: 5 (lower is better)
Translates to: KQQQGHREETLMIQCDSSDAGTG*ARNFFL
Trigger: TAAGAAGAAATTCCGAGCCAATCCAGTTCCTGCATC...TGAAGAATCACACTGAATCATCAAGGTCTCCTCTCTATGCCCTTGCTGTTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418113.5
ENST00000456262.5
CDS-3UTR CAA 90 bp AAGACAGATGCAGGAACTGGATTGGCTCGGAATTTCTTCTTATACTCTGGATCCGTTGGGCACCTAACCTaGTGTTTACACTTCAACTTT +
Preference number: 5 (lower is better)
Translates to: KTDAGTGLARNFFLYSGSVGHLT*CLHFNF
Trigger: AAAGTTGAAGTGTAAACACAAGGTTAGGTGCCCAAC...GGATCCAGAGTATAAGAAGAAATTCCGAGCCAATCCAGTTCCTGCATCTGTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
CDS-3UTR CAA 90 bp CTAGGATACTCTTTTTCTAGGTTGGGTAACTCCTCTTCAGAGGAGGACACATACAAGAGTTTTGGAGACTaGTGTTCTGAGAGGTGTTTC +
Preference number: 5 (lower is better)
Translates to: LGYSFSRLGNSSSEEDTYKSFGD*CSERCF
Trigger: GAAACACCTCTCAGAACACAAGTCTCCAAAACTCTT...GTATGTGTCCTCCTCTGAAGAGGAGTTACCCAACCTAGAAAAAGAGTATCCTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
CDS-3UTR CAA 90 bp AAGGTCCTCAAAATCAGGAGTTGGGCACCTAACCTTGTGTTTACACTTCAACTTAAGTCTGTCCACATATaGTTGATGAGCTCCTTAGCA +
Preference number: 5 (lower is better)
Translates to: KVLKIRSWAPNLVFTLQLKSVHI*LMSSLA
Trigger: TGCTAAGGAGCTCATCAACAATATGTGGACAGACTT...AAGTTGAAGTGTAAACACAAGGTTAGGTGCCCAACTCCTGATTTTGAGGACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
CDS-3UTR CAA 90 bp AATAGGCAAAGCCTTACTCTAACTGATCAAATGACCAATCAGCTGGATTCAGGCAAGTCTGTCCACATATaGTTGATGAGCTCCTTAGCA +
Preference number: 5 (lower is better)
Translates to: NRQSLTLTDQMTNQLDSGKSVHI*LMSSLA
Trigger: TGCTAAGGAGCTCATCAACAATATGTGGACAGACTT...GCCTGAATCCAGCTGATTGGTCATTTGATCAGTTAGAGTAAGGCTTTGCCTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR CAA 90 bp TACTCTTTTTCTAGGTTGGGTAACTCCTCTTCAGAGGAGGACACATACAAGGAGTTCTCTTATCATCATTaGAAAAGGCTCCGGTACTGT +
Preference number: 5 (lower is better)
Translates to: YSFSRLGNSSSEEDTYKEFSYHH*KRLRYC
Trigger: ACAGTACCGGAGCCTTTTCAAATGATGATAAGAGAA...CTCCTTGTATGTGTCCTCCTCTGAAGAGGAGTTACCCAACCTAGAAAAAGAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
CDS-3UTR CAA 90 bp AATAGGCAAAGCCTTACTCTAACTGATCAAATGACCAATCAGCTGGATTCAGGCGTTGGGCACCTAACCTaGTGTTTACACTTCAACTTT +
Preference number: 5 (lower is better)
Translates to: NRQSLTLTDQMTNQLDSGVGHLT*CLHFNF
Trigger: AAAGTTGAAGTGTAAACACAAGGTTAGGTGCCCAAC...GCCTGAATCCAGCTGATTGGTCATTTGATCAGTTAGAGTAAGGCTTTGCCTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR CAA 90 bp AATAGGCAAAGCCTTACTCTAACTGATCAAATGACCAATCAGCTGGATTCAGGCAAGAGTTTTGGAGACTaGTGTTCTGAGAGGTGTTTC +
Preference number: 5 (lower is better)
Translates to: NRQSLTLTDQMTNQLDSGKSFGD*CSERCF
Trigger: GAAACACCTCTCAGAACACAAGTCTCCAAAACTCTT...GCCTGAATCCAGCTGATTGGTCATTTGATCAGTTAGAGTAAGGCTTTGCCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR CAA 90 bp TACTCTTTTTCTAGGTTGGGTAACTCCTCTTCAGAGGAGGACACATACAAGGAGACACTGTTAAGAGTTTaGGAGACTTGTGTTCTGAGA +
Preference number: 5 (lower is better)
Translates to: YSFSRLGNSSSEEDTYKETLLRV*ETCVLR
Trigger: TCTCAGAACACAAGTCTCCAAAACTCTTAACAGTGT...CTCCTTGTATGTGTCCTCCTCTGAAGAGGAGTTACCCAACCTAGAAAAAGAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
CDS-3UTR CAA 90 bp AATAGGCAAAGCCTTACTCTAACTGATCAAATGACCAATCAGCTGGATTCAGGCACACTGTTAAGAGTTTaGGAGACTTGTGTTCTGAGA +
Preference number: 5 (lower is better)
Translates to: NRQSLTLTDQMTNQLDSGTLLRV*ETCVLR
Trigger: TCTCAGAACACAAGTCTCCAAAACTCTTAACAGTGT...GCCTGAATCCAGCTGATTGGTCATTTGATCAGTTAGAGTAAGGCTTTGCCTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR CAA 90 bp AAACAACAGCAAGGGCATAGAGAGGAGACCTTGATGATTCAGTGTGATTCTTCAACACTGTTAAGAGTTTaGGAGACTTGTGTTCTGAGA +
Preference number: 5 (lower is better)
Translates to: KQQQGHREETLMIQCDSSTLLRV*ETCVLR
Trigger: TCTCAGAACACAAGTCTCCAAAACTCTTAACAGTGT...TGAAGAATCACACTGAATCATCAAGGTCTCCTCTCTATGCCCTTGCTGTTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418113.5
ENST00000456262.5
CDS-3UTR CAA 90 bp ATACTCCTCATTAGAGTGGTGAATATCAGGAAAGTTCACAAAGTCCTCATAGCTTACTCTTTTTCTAGGTaGGGTAACTCCTCTTCAGAG +
Preference number: 5 (lower is better)
Translates to: ILLIRVVNIRKVHKVLIAYSFSR*GNSSSE
Trigger: CTCTGAAGAGGAGTTACCCAACCTAGAAAAAGAGTA...AGCTATGAGGACTTTGTGAACTTTCCTGATATTCACCACTCTAATGAGGAGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307507.3
CDS-3UTR CAA 90 bp AATAGGCAAAGCCTTACTCTAACTGATCAAATGACCAATCAGCTGGATTCAGGCTCCTCTTCTTGTTTTTaGAGCGCTTTATGTACCATT +
Preference number: 5 (lower is better)
Translates to: NRQSLTLTDQMTNQLDSGSSSCF*SALCTI
Trigger: AATGGTACATAAAGCGCTCAAAAAACAAGAAGAGGA...GCCTGAATCCAGCTGATTGGTCATTTGATCAGTTAGAGTAAGGCTTTGCCTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR CAA 90 bp AAAGACAGATGCAGGAACTGGATTGGCTCGGAATTTCTTCTTATACTCTGGATCTCCTCTTCTTGTTTTTaGAGCGCTTTATGTACCATT +
Preference number: 5 (lower is better)
Translates to: KDRCRNWIGSEFLLILWISSSCF*SALCTI
Trigger: AATGGTACATAAAGCGCTCAAAAAACAAGAAGAGGA...GATCCAGAGTATAAGAAGAAATTCCGAGCCAATCCAGTTCCTGCATCTGTCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
CDS-3UTR CAA 90 bp GAATTACTTTGGAGACTTGCCCTAGCCAAGTTATTATGCACAATTTCATCATATTACTCTTTTTCTAGGTaGGGTAACTCCTCTTCAGAG +
Preference number: 5 (lower is better)
Translates to: ELLWRLALAKLLCTISSYYSFSR*GNSSSE
Trigger: CTCTGAAGAGGAGTTACCCAACCTAGAAAAAGAGTA...ATATGATGAAATTGTGCATAATAACTTGGCTAGGGCAAGTCTCCAAAGTAATTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS-3UTR CAA 90 bp TCTTTTAATAGATGCATGTGGAGATGCATGAAGATCAAATGGTTTACACACTGTAAGAGTTTTGGAGACTaGTGTTCTGAGAGGTGTTTC +
Preference number: 5 (lower is better)
Translates to: SFNRCMWRCMKIKWFTHCKSFGD*CSERCF
Trigger: GAAACACCTCTCAGAACACAAGTCTCCAAAACTCTT...ACAGTGTGTAAACCATTTGATCTTCATGCATCTCCACATGCATCTATTAAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307507.3
ENST00000456262.5
CDS-3UTR CAA 90 bp GAATTACTTTGGAGACTTGCCCTAGCCAAGTTATTATGCACAATTTCATCATATTCCTCTTCTTGTTTTTaGAGCGCTTTATGTACCATT +
Preference number: 5 (lower is better)
Translates to: ELLWRLALAKLLCTISSYSSSCF*SALCTI
Trigger: AATGGTACATAAAGCGCTCAAAAAACAAGAAGAGGA...ATATGATGAAATTGTGCATAATAACTTGGCTAGGGCAAGTCTCCAAAGTAATTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS GCA 72 bp AGGTGGCCATCGCCCCGCCTCCGAGGCCTGAGCGCCTaGGCTGGCCCGGGACGGGAAAGCTGGTGCGGCCCC +
Preference number: 6 (lower is better)
Translates to: RWPSPRLRGLSA*AGPGRESWCGP
Trigger: GGGGCCGCACCAGCTTTCCCGTCCCGGGCCAGCGCAGGCGCTCAGGCCTCGGAGGCGGGGCGATGGCCACCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405894.3
CDS CCA 72 bp GCCATCGCCCCGCCTCCGAGGCCTGAGCGCCTGCGCTaGCCCGGGACGGGAAAGCTGGTGCGGCCCCTGGCA +
Preference number: 6 (lower is better)
Translates to: AIAPPPRPERLR*PGTGKLVRPLA
Trigger: TGCCAGGGGCCGCACCAGCTTTCCCGTCCCGGGCCAGCGCAGGCGCTCAGGCCTCGGAGGCGGGGCGATGGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405894.3
CDS CCA 72 bp GCCGCCAGGGCCTTTAAGGGGTCTTCGCGTTCGTACTaGGCGACCCGCGCTCCAGTGATGGGATTTACCGGG +
Preference number: 6 (lower is better)
Translates to: AARAFKGSSRSY*ATRAPVMGFTG
Trigger: CCCGGTAAATCCCATCACTGGAGCGCGGGTCGCCCAGTACGAACGCGAAGACCCCTTAAAGGCCCTGGCGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307507.3
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS TCA 72 bp GGTCTTCGCGTTCGTACTGGGCGACCCGCGCTCCAGTaGTGGGATTTACCGGGGTCTGGAGACTGGAGGCCA +
Preference number: 6 (lower is better)
Translates to: GLRVRTGRPALQ*WDLPGSGDWRP
Trigger: TGGCCTCCAGTCTCCAGACCCCGGTAAATCCCATCACTGGAGCGCGGGTCGCCCAGTACGAACGCGAAGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307507.3
ENST00000404929.6
ENST00000405894.3
ENST00000418113.5
ENST00000456262.5
CDS TCA 72 bp GAGGTCAGGAATCCGAGACCAATCTGGCCAACATGGTaGAACCCCATCTCGATGCCCCAGCGGGCTGAGCCA +
Preference number: 6 (lower is better)
Translates to: EVRNPRPIWPTW*NPISMPQRAEP
Trigger: TGGCTCAGCCCGCTGGGGCATCGAGATGGGGTTTCACCATGTTGGCCAGATTGGTCTCGGATTCCTGACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307507.3
CDS CCA 72 bp TCCTTACGGCTTGTTCTCGTCCTCTGGAAGATACCGTaGGCACGGGAGGGTTGCAGTTACAAGGCACAGGGT +
Preference number: 6 (lower is better)
Translates to: SLRLVLVLWKIP*AREGCSYKAQG
Trigger: ACCCTGTGCCTTGTAACTGCAACCCTCCCGTGCCCACGGTATCTTCCAGAGGACGAGAACAAGCCGTAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404929.6
ENST00000418113.5
CDS CCA 72 bp CCTCAAGTGATCTCCTTACGGCTTGTTCTCGTCCTCTaGAAGATACCGTGGGCACGGGAGGGTTGCAGTTAC +
Preference number: 6 (lower is better)
Translates to: PQVISLRLVLVL*KIPWAREGCSY
Trigger: GTAACTGCAACCCTCCCGTGCCCACGGTATCTTCCAGAGGACGAGAACAAGCCGTAAGGAGATCACTTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404929.6
ENST00000418113.5