RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM160B2 (Homo sapiens)

Ensembl gene IDs: ENSG00000158863

Ensembl transcript IDs: ENST00000289921.8, ENST00000427751.5, ENST00000450006.7, ENST00000462914.3, ENST00000464226.2, ENST00000474579.1, ENST00000477614.1, ENST00000488968.1, ENST00000491733.2, ENST00000496599.3, ENST00000498344.2, ENST00000523633.1

Found 582 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCAGCCCAGCCACGGAGGGCATGCAGGGAGAACACCACCAGGACTaGCTGCCTGGGCCGCAGCCACTTCCCGCCAGGCTCAGGGGCCTG +
Preference number: 1 (lower is better)
Translates to: GSPATEGMQGEHHQD*LPGPQPLPARLRGL
Trigger: CAGGCCCCTGAGCCTGGCGGGAAGTGGCTGCGGCCCAGGCAGCCAGTCCTGGTGGTGTTCTCCCTGCATGCCCTCCGTGGCTGGGCTGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR GCA 90 bp GCCCAGCCACGGAGGGCATGCAGGGAGAACACCACCAGGACTGGCTaGCTGGGCCGCAGCCACTTCCCGCCAGGCTCAGGGGCCTGGAGT +
Preference number: 1 (lower is better)
Translates to: AQPRRACRENTTRTG*LGRSHFPPGSGAWS
Trigger: ACTCCAGGCCCCTGAGCCTGGCGGGAAGTGGCTGCGGCCCAGGCAGCCAGTCCTGGTGGTGTTCTCCCTGCATGCCCTCCGTGGCTGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR CCA 90 bp AGCCACGGAGGGCATGCAGGGAGAACACCACCAGGACTGGCTGCCTaGGCCGCAGCCACTTCCCGCCAGGCTCAGGGGCCTGGAGTCAGG +
Preference number: 1 (lower is better)
Translates to: SHGGHAGRTPPGLAA*AAATSRQAQGPGVR
Trigger: CCTGACTCCAGGCCCCTGAGCCTGGCGGGAAGTGGCTGCGGCCCAGGCAGCCAGTCCTGGTGGTGTTCTCCCTGCATGCCCTCCGTGGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR GCA 90 bp TACTCGGCCTTGCCCAGCGTGCAGAGAGTCTCCAGGATCTTGTGCTaGAGCAGGTACTCCAGGCAGGGCCCTGCCTCACCCGCGGCCGCC +
Preference number: 1 (lower is better)
Translates to: YSALPSVQRVSRILC*SRYSRQGPASPAAA
Trigger: GGCGGCCGCGGGTGAGGCAGGGCCCTGCCTGGAGTACCTGCTGCAGCACAAGATCCTGGAGACTCTCTGCACGCTGGGCAAGGCCGAGTA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427751.5
3UTR GCA 90 bp GGGTACTCGGCCTTGCCCAGCGTGCAGAGAGTCTCCAGGATCTTGTaGTGCAGCAGGTACTCCAGGCAGGGCCCTGCCTCACCCGCGGCC +
Preference number: 1 (lower is better)
Translates to: GYSALPSVQRVSRIL*CSRYSRQGPASPAA
Trigger: GGCCGCGGGTGAGGCAGGGCCCTGCCTGGAGTACCTGCTGCAGCACAAGATCCTGGAGACTCTCTGCACGCTGGGCAAGGCCGAGTACCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427751.5
3UTR CCA 90 bp GCGCCGCCCGTGTATTCCTGCAGGTCAAGACAGATTCGGGCCGGGTaGGGTGGCAGCCCAGCCACGGAGGGCATGCAGGGAGAACACCAC +
Preference number: 1 (lower is better)
Translates to: APPVYSCRSRQIRAG*GGSPATEGMQGEHH
Trigger: GTGGTGTTCTCCCTGCATGCCCTCCGTGGCTGGGCTGCCACCCCACCCGGCCCGAATCTGTCTTGACCTGCAGGAATACACGGGCGGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR CCA 90 bp GCCCGTGTATTCCTGCAGGTCAAGACAGATTCGGGCCGGGTGGGGTaGCAGCCCAGCCACGGAGGGCATGCAGGGAGAACACCACCAGGA +
Preference number: 1 (lower is better)
Translates to: ARVFLQVKTDSGRVG*QPSHGGHAGRTPPG
Trigger: TCCTGGTGGTGTTCTCCCTGCATGCCCTCCGTGGCTGGGCTGCCACCCCACCCGGCCCGAATCTGTCTTGACCTGCAGGAATACACGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR GCA 90 bp CCGCCAAGAGTCTGGCTCCTGGCAGGCGCTGAGGATCAGCAGATCTaGACTGCCAGAGCCTGTCTGTTTACCGCCCACCCCACCTCCCTG +
Preference number: 1 (lower is better)
Translates to: PPRVWLLAGAEDQQI*TARACLFTAHPTSL
Trigger: CAGGGAGGTGGGGTGGGCGGTAAACAGACAGGCTCTGGCAGTGCAGATCTGCTGATCCTCAGCGCCTGCCAGGAGCCAGACTCTTGGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR CCA 90 bp TGGGGCCTGGCAGGAGCACCATCGTGGGAGCAGTCCTTGTCCCCGTaGCTGGTTGTGTCCTTAGGCAGGGCAGTGGGTTCTCCGCATGCT +
Preference number: 1 (lower is better)
Translates to: WGLAGAPSWEQSLSP*LVVSLGRAVGSPHA
Trigger: AGCATGCGGAGAACCCACTGCCCTGCCTAAGGACACAACCAGCCACGGGGACAAGGACTGCTCCCACGATGGTGCTCCTGCCAGGCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427751.5
3UTR TCA 90 bp CTGAAACCCAGTCTGGTGTGGTCAACATGCCGCAGTCTCCTTGAGTaGGCCCGGGAGCAGAAGCCCCATCCCAGGAGGGGAGTGTGGCGG +
Preference number: 1 (lower is better)
Translates to: LKPSLVWSTCRSLLE*AREQKPHPRRGVWR
Trigger: CCGCCACACTCCCCTCCTGGGATGGGGCTTCTGCTCCCGGGCTCACTCAAGGAGACTGCGGCATGTTGACCACACCAGACTGGGTTTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
3UTR GCA 90 bp CATCCACGGAGATCTGCGCCCCGTCCACACCAACACCCACGTTTGTaGACCCACATGTGCACGGTGCTCTTCAGAGCGGCGAGGTCCTCC +
Preference number: 1 (lower is better)
Translates to: HPRRSAPRPHQHPRL*THMCTVLFRAARSS
Trigger: GGAGGACCTCGCCGCTCTGAAGAGCACCGTGCACATGTGGGTGCACAAACGTGGGTGTTGGTGTGGACGGGGCGCAGATCTCCGTGGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
3UTR CCA 90 bp CTGGCTGCAGCTGCACCAAGGTTCTCATTAGCAGGGGCCCCCGCCTaGGTGCGGAACATGCTTTGGGCATTTGCCATGAGGCGGCTGGGA +
Preference number: 1 (lower is better)
Translates to: LAAAAPRFSLAGAPA*VRNMLWAFAMRRLG
Trigger: TCCCAGCCGCCTCATGGCAAATGCCCAAAGCATGTTCCGCACCCAGGCGGGGGCCCCTGCTAATGAGAACCTTGGTGCAGCTGCAGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR CCA 90 bp CGGTGCTCTTCAGAGCGGCGAGGTCCTCCCCCGCGGGGAGGAATGTaGGAGAGGCAGAGGTCACTGAGTTTCCTCCTGTTTCGTGTCACC +
Preference number: 1 (lower is better)
Translates to: RCSSERRGPPPRGGM*ERQRSLSFLLFRVT
Trigger: GGTGACACGAAACAGGAGGAAACTCAGTGACCTCTGCCTCTCCCACATTCCTCCCCGCGGGGGAGGACCTCGCCGCTCTGAAGAGCACCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
3UTR CCA 90 bp GTCAGCCCAGCAGAAGTGGCACTGCTCCGCCAAGAGTCTGGCTCCTaGCAGGCGCTGAGGATCAGCAGATCTGCACTGCCAGAGCCTGTC +
Preference number: 1 (lower is better)
Translates to: VSPAEVALLRQESGS*QALRISRSALPEPV
Trigger: GACAGGCTCTGGCAGTGCAGATCTGCTGATCCTCAGCGCCTGCCAGGAGCCAGACTCTTGGCGGAGCAGTGCCACTTCTGCTGGGCTGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR CCA 90 bp GCTGCAGGTCAGCCCAGCAGAAGTGGCACTGCTCCGCCAAGAGTCTaGCTCCTGGCAGGCGCTGAGGATCAGCAGATCTGCACTGCCAGA +
Preference number: 1 (lower is better)
Translates to: AAGQPSRSGTAPPRV*LLAGAEDQQICTAR
Trigger: TCTGGCAGTGCAGATCTGCTGATCCTCAGCGCCTGCCAGGAGCCAGACTCTTGGCGGAGCAGTGCCACTTCTGCTGGGCTGACCTGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR CCA 90 bp CACAGATGCTCCCACGTGGTCCATTCCCTCATGGTGTCTCCGGGGTaGGCAGACTCTCCGCTGCAGGTCAGCCCAGCAGAAGTGGCACTG +
Preference number: 1 (lower is better)
Translates to: HRCSHVVHSLMVSPG*ADSPLQVSPAEVAL
Trigger: CAGTGCCACTTCTGCTGGGCTGACCTGCAGCGGAGAGTCTGCCCACCCCGGAGACACCATGAGGGAATGGACCACGTGGGAGCATCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR TCA 90 bp TTCCCTGAAACCCAGTCTGGTGTGGTCAACATGCCGCAGTCTCCTTaGGTGAGCCCGGGAGCAGAAGCCCCATCCCAGGAGGGGAGTGTG +
Preference number: 1 (lower is better)
Translates to: FPETQSGVVNMPQSP*VSPGAEAPSQEGSV
Trigger: CACACTCCCCTCCTGGGATGGGGCTTCTGCTCCCGGGCTCACTCAAGGAGACTGCGGCATGTTGACCACACCAGACTGGGTTTCAGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
3UTR TCA 90 bp CAGAAGTGGCACTGCTCCGCCAAGAGTCTGGCTCCTGGCAGGCGCTaGGGATCAGCAGATCTGCACTGCCAGAGCCTGTCTGTTTACCGC +
Preference number: 1 (lower is better)
Translates to: QKWHCSAKSLAPGRR*GSADLHCQSLSVYR
Trigger: GCGGTAAACAGACAGGCTCTGGCAGTGCAGATCTGCTGATCCTCAGCGCCTGCCAGGAGCCAGACTCTTGGCGGAGCAGTGCCACTTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR GCA 90 bp CTGGCTGTCACCCAAGCTCCTCCAAGAAGGCCCCAAGGACCTTGCTaGCTGGAAAGCCATCTGTTTGGCTCCTTGGCACCTGGCATGCCC +
Preference number: 1 (lower is better)
Translates to: LAVTQAPPRRPQGPC*LESHLFGSLAPGMP
Trigger: GGGCATGCCAGGTGCCAAGGAGCCAAACAGATGGCTTTCCAGGCAGCAAGGTCCTTGGGGCCTTCTTGGAGGAGCTTGGGTGACAGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
3UTR TCA 90 bp CCAGTCTCGGAGCCATCAGCTCACTCCCCATCTTGCCCCTGGAGTTaGGTCACAGGCTTGGCCCTGGCCACAAATGGCCAGTACAGAAGG +
Preference number: 1 (lower is better)
Translates to: PVSEPSAHSPSCPWS*VTGLALATNGQYRR
Trigger: CCTTCTGTACTGGCCATTTGTGGCCAGGGCCAAGCCTGTGACTCAACTCCAGGGGCAAGATGGGGAGTGAGCTGATGGCTCCGAGACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR TCA 90 bp TCCTCCTTGCCCAGGAGCAAAGCCAGCAACTGTGTAGTCCCGCTGTaGGGTAATGCCTGGCGCCGCCCGTGTATTCCTGCAGGTCAAGAC +
Preference number: 1 (lower is better)
Translates to: SSLPRSKASNCVVPL*GNAWRRPCIPAGQD
Trigger: GTCTTGACCTGCAGGAATACACGGGCGGCGCCAGGCATTACCTCACAGCGGGACTACACAGTTGCTGGCTTTGCTCCTGGGCAAGGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR GCA 90 bp CACCTGGCTGTCACCCAAGCTCCTCCAAGAAGGCCCCAAGGACCTTaGTGCCTGGAAAGCCATCTGTTTGGCTCCTTGGCACCTGGCATG +
Preference number: 1 (lower is better)
Translates to: HLAVTQAPPRRPQGP*CLESHLFGSLAPGM
Trigger: CATGCCAGGTGCCAAGGAGCCAAACAGATGGCTTTCCAGGCAGCAAGGTCCTTGGGGCCTTCTTGGAGGAGCTTGGGTGACAGCCAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR GCA 90 bp GCGGCCGCCTGCTGCTGCTCTTCATACACCAGGATATCCAGCATCTaGTTCAGCCGCCAGGGAATGTCTGTCTTCTTGGCGGGGGTGCTT +
Preference number: 1 (lower is better)
Translates to: AAACCCSSYTRISSI*FSRQGMSVFLAGVL
Trigger: AAGCACCCCCGCCAAGAAGACAGACATTCCCTGGCGGCTGAAGCAGATGCTGGATATCCTGGTGTATGAAGAGCAGCAGCAGGCGGCCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427751.5
3UTR CCA 90 bp GGCCCCAAGGACCTTGCTGCCTGGAAAGCCATCTGTTTGGCTCCTTaGCACCTGGCATGCCCATTCCCTGAAACCCAGTCTGGTGTGGTC +
Preference number: 1 (lower is better)
Translates to: GPKDLAAWKAICLAP*HLACPFPETQSGVV
Trigger: GACCACACCAGACTGGGTTTCAGGGAATGGGCATGCCAGGTGCCAAGGAGCCAAACAGATGGCTTTCCAGGCAGCAAGGTCCTTGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
3UTR GCA 90 bp CTTCTGGCTGTCACCCAAGCTCCTCCAAGAAGGCCCCAAGGACCTTaGTGCCTGGAAAGCCATCTGTTTGGCTCCTTGGCACCTGGCATG +
Preference number: 1 (lower is better)
Translates to: LLAVTQAPPRRPQGP*CLESHLFGSLAPGM
Trigger: CATGCCAGGTGCCAAGGAGCCAAACAGATGGCTTTCCAGGCAGCAAGGTCCTTGGGGCCTTCTTGGAGGAGCTTGGGTGACAGCCAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450006.7
3UTR CCA 90 bp CTGTCACCCAAGCTCCTCCAAGAAGGCCCCAAGGACCTTGCTGCCTaGAAAGCCATCTGTTTGGCTCCTTGGCACCTGGCATGCCCATTC +
Preference number: 1 (lower is better)
Translates to: LSPKLLQEGPKDLAA*KAICLAPWHLACPF
Trigger: GAATGGGCATGCCAGGTGCCAAGGAGCCAAACAGATGGCTTTCCAGGCAGCAAGGTCCTTGGGGCCTTCTTGGAGGAGCTTGGGTGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
3UTR GCA 90 bp CTTGCTGCCTGGAAAGCCATCTGTTTGGCTCCTTGGCACCTGGCATaGCCATTCCCTGAAACCCAGTCTGGTGTGGTCAACATGCCGCAG +
Preference number: 1 (lower is better)
Translates to: LAAWKAICLAPWHLA*PFPETQSGVVNMPQ
Trigger: CTGCGGCATGTTGACCACACCAGACTGGGTTTCAGGGAATGGGCATGCCAGGTGCCAAGGAGCCAAACAGATGGCTTTCCAGGCAGCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
3UTR GCA 90 bp AGCTCTGGGTCCTGCTGGATCTTGGAGCAGAGGACGGTGGTGAACTaGACCTCCTCCTTTTCTGTAACGGATCCGGAAGCAGTCCCACCA +
Preference number: 1 (lower is better)
Translates to: SSGSCWILEQRTVVN*TSSFSVTDPEAVPP
Trigger: TGGTGGGACTGCTTCCGGATCCGTTACAGAAAAGGAGGAGGTGCAGTTCACCACCGTCCTCTGCTCCAAGATCCAGCAGGACCCAGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427751.5
3UTR CCA 90 bp TCCAAGAAGGCCCCAAGGACCTTGCTGCCTGGAAAGCCATCTGTTTaGCTCCTTGGCACCTGGCATGCCCATTCCCTGAAACCCAGTCTG +
Preference number: 1 (lower is better)
Translates to: SKKAPRTLLPGKPSV*LLGTWHAHSLKPSL
Trigger: CAGACTGGGTTTCAGGGAATGGGCATGCCAGGTGCCAAGGAGCCAAACAGATGGCTTTCCAGGCAGCAAGGTCCTTGGGGCCTTCTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
3UTR CCA 90 bp GGAGGAAGATGGGCCCGAATTAGCAGTGGAGTCCTGGGCAGAAGGTaGGGAAACTTGGCCAAGAACAGAGCCACGGTGTCCACGCAATCA +
Preference number: 1 (lower is better)
Translates to: GGRWARISSGVLGRR*GNLAKNRATVSTQS
Trigger: TGATTGCGTGGACACCGTGGCTCTGTTCTTGGCCAAGTTTCCCCACCTTCTGCCCAGGACTCCACTGCTAATTCGGGCCCATCTTCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR CCA 90 bp AGGACCTTGCTGCCTGGAAAGCCATCTGTTTGGCTCCTTGGCACCTaGCATGCCCATTCCCTGAAACCCAGTCTGGTGTGGTCAACATGC +
Preference number: 1 (lower is better)
Translates to: RTLLPGKPSVWLLGT*HAHSLKPSLVWSTC
Trigger: GCATGTTGACCACACCAGACTGGGTTTCAGGGAATGGGCATGCCAGGTGCCAAGGAGCCAAACAGATGGCTTTCCAGGCAGCAAGGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
3UTR TCA 90 bp GAAAGCCATCTGTTTGGCTCCTTGGCACCTGGCATGCCCATTCCCTaGAACCCAGTCTGGTGTGGTCAACATGCCGCAGTCTCCTTGAGT +
Preference number: 1 (lower is better)
Translates to: ESHLFGSLAPGMPIP*NPVWCGQHAAVSLS
Trigger: ACTCAAGGAGACTGCGGCATGTTGACCACACCAGACTGGGTTTCAGGGAATGGGCATGCCAGGTGCCAAGGAGCCAAACAGATGGCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
3UTR CCA 90 bp TCGTGTCACCTCTTGGCAACCTGTGCCTGGCTTCTAGAAGCGGCATaGGCAAGAAAAGGAAGCAAAAGAGGCTCTGGCCTGCTCCTCCTT +
Preference number: 1 (lower is better)
Translates to: SCHLLATCAWLLEAA*ARKGSKRGSGLLLL
Trigger: AAGGAGGAGCAGGCCAGAGCCTCTTTTGCTTCCTTTTCTTGCCCATGCCGCTTCTAGAAGCCAGGCACAGGTTGCCAAGAGGTGACACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR CCA 90 bp GGGCCCGAATTAGCAGTGGAGTCCTGGGCAGAAGGTGGGGAAACTTaGCCAAGAACAGAGCCACGGTGTCCACGCAATCACACCATTTAT +
Preference number: 1 (lower is better)
Translates to: GPELAVESWAEGGET*PRTEPRCPRNHTIY
Trigger: ATAAATGGTGTGATTGCGTGGACACCGTGGCTCTGTTCTTGGCCAAGTTTCCCCACCTTCTGCCCAGGACTCCACTGCTAATTCGGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR CCA 90 bp ACCCCACCTCCCTGCTGCAGCGCTAGAAAAAGAATTTGTCTTCCTTaGGGAGGAAGATGGGCCCGAATTAGCAGTGGAGTCCTGGGCAGA +
Preference number: 1 (lower is better)
Translates to: TPPPCCSARKRICLP*GGRWARISSGVLGR
Trigger: TCTGCCCAGGACTCCACTGCTAATTCGGGCCCATCTTCCTCCCCAAGGAAGACAAATTCTTTTTCTAGCGCTGCAGCAGGGAGGTGGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR TCA 90 bp TGCTGTGCTGTCCGGGGAAGACACCGTGCAAATGCCAAAGTGCACTaGGGAGAGGGGAGGGTCTGTGACTCCCAAACCCTCGAATATTTT +
Preference number: 1 (lower is better)
Translates to: CCAVRGRHRANAKVH*GEGRVCDSQTLEYF
Trigger: AAAATATTCGAGGGTTTGGGAGTCACAGACCCTCCCCTCTCCTCAGTGCACTTTGGCATTTGCACGGTGTCTTCCCCGGACAGCACAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
3UTR GCA 90 bp TTTATTGCTGTGCTGTCCGGGGAAGACACCGTGCAAATGCCAAAGTaGACTGAGGAGAGGGGAGGGTCTGTGACTCCCAAACCCTCGAAT +
Preference number: 1 (lower is better)
Translates to: FIAVLSGEDTVQMPK*TEERGGSVTPKPSN
Trigger: ATTCGAGGGTTTGGGAGTCACAGACCCTCCCCTCTCCTCAGTGCACTTTGGCATTTGCACGGTGTCTTCCCCGGACAGCACAGCAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
3UTR GCA 90 bp TGGCCAAGAACAGAGCCACGGTGTCCACGCAATCACACCATTTATTaGTGTGCTGTCCGGGGAAGACACCGTGCAAATGCCAAAGTGCAC +
Preference number: 1 (lower is better)
Translates to: WPRTEPRCPRNHTIY*CAVRGRHRANAKVH
Trigger: GTGCACTTTGGCATTTGCACGGTGTCTTCCCCGGACAGCACAGCAATAAATGGTGTGATTGCGTGGACACCGTGGCTCTGTTCTTGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR CCA 90 bp CCTACCTACAATCTTTTTACCTTCCAGGATGTAGGCGAGCAGCTCTaGGTCCTGCTGGATCTTGGAGCAGAGGACGGTGGTGAACTGCAC +
Preference number: 1 (lower is better)
Translates to: PTYNLFTFQDVGEQL*VLLDLGAEDGGELH
Trigger: GTGCAGTTCACCACCGTCCTCTGCTCCAAGATCCAGCAGGACCCAGAGCTGCTCGCCTACATCCTGGAAGGTAAAAAGATTGTAGGTAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427751.5
3UTR GCA 90 bp AAGAACAGAGCCACGGTGTCCACGCAATCACACCATTTATTGCTGTaGTGTCCGGGGAAGACACCGTGCAAATGCCAAAGTGCACTGAGG +
Preference number: 1 (lower is better)
Translates to: KNRATVSTQSHHLLL*CPGKTPCKCQSALR
Trigger: CCTCAGTGCACTTTGGCATTTGCACGGTGTCTTCCCCGGACAGCACAGCAATAAATGGTGTGATTGCGTGGACACCGTGGCTCTGTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR GCA 90 bp CCCGTGGCTGGTTGTGTCCTTAGGCAGGGCAGTGGGTTCTCCGCATaGTTTCTTCCTACCTACAATCTTTTTACCTTCCAGGATGTAGGC +
Preference number: 1 (lower is better)
Translates to: PVAGCVLRQGSGFSA*FLPTYNLFTFQDVG
Trigger: GCCTACATCCTGGAAGGTAAAAAGATTGTAGGTAGGAAGAAAGCATGCGGAGAACCCACTGCCCTGCCTAAGGACACAACCAGCCACGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427751.5
3UTR TCA 90 bp ACACCGTGCAAATGCCAAAGTGCACTGAGGAGAGGGGAGGGTCTGTaGCTCCCAAACCCTCGAATATTTTATGAATCTAAGAGTCCAGAC +
Preference number: 1 (lower is better)
Translates to: TPCKCQSALRRGEGL*LPNPRIFYESKSPD
Trigger: GTCTGGACTCTTAGATTCATAAAATATTCGAGGGTTTGGGAGTCACAGACCCTCCCCTCTCCTCAGTGCACTTTGGCATTTGCACGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
3UTR TCA 90 bp AGCCTTGAACTTAAAGACAAGGTTTTAAATATCAGGCCTACTTTATaGCTAAAACAGGCATACAACACGCAGCATAAACACACCCAAATG +
Preference number: 1 (lower is better)
Translates to: SLELKDKVLNIRPTL*LKQAYNTQHKHTQM
Trigger: CATTTGGGTGTGTTTATGCTGCGTGTTGTATGCCTGTTTTAGTCATAAAGTAGGCCTGATATTTAAAACCTTGTCTTTAAGTTCAAGGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR-3UTR CCA 90 bp TGGGCCGCAGCCACTTCCCGCCAGGCTCAGGGGCCTGGAGTCAGGGGGCGTCCTGTTGAGTCACAGGCTTaGCCCTGGCCACAAATGGCC +
Preference number: 2 (lower is better)
Translates to: WAAATSRQAQGPGVRGRPVESQA*PWPQMA
Trigger: GGCCATTTGTGGCCAGGGCCAAGCCTGTGACTCAAC...AGGACGCCCCCTGACTCCAGGCCCCTGAGCCTGGCGGGAAGTGGCTGCGGCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR CAA 90 bp CCGTCCAGCTGGGGCCTGGCAGGAGCACCATCGTGGGAGCAGTCCTaGTCCCCGTGGCTGGTTGTGTCCTTAGGCAGGGCAGTGGGTTCT +
Preference number: 2 (lower is better)
Translates to: PSSWGLAGAPSWEQS*SPWLVVSLGRAVGS
Trigger: AGAACCCACTGCCCTGCCTAAGGACACAACCAGCCACGGGGACAAGGACTGCTCCCACGATGGTGCTCCTGCCAGGCCCCAGCTGGACGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427751.5
3UTR-3UTR GCA 90 bp GGAGAACACCACCAGGACTGGCTGCCTGGGCCGCAGCCACTTCCCGCCAGGCTCCCTTGGCACCTGGCATaGCCATTCCCTGAAACCCAG +
Preference number: 2 (lower is better)
Translates to: GEHHQDWLPGPQPLPARLPWHLA*PFPETQ
Trigger: CTGGGTTTCAGGGAATGGGCATGCCAGGTGCCAAGG...GAGCCTGGCGGGAAGTGGCTGCGGCCCAGGCAGCCAGTCCTGGTGGTGTTCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR-3UTR CCA 90 bp GCGCCGCCCGTGTATTCCTGCAGGTCAAGACAGATTCGGGCCGGGTGGGGTGGCGGCCCTGGCCACAAATaGCCAGTACAGAAGGGGCCA +
Preference number: 2 (lower is better)
Translates to: APPVYSCRSRQIRAGWGGGPGHK*PVQKGP
Trigger: TGGCCCCTTCTGTACTGGCCATTTGTGGCCAGGGCC...GCCACCCCACCCGGCCCGAATCTGTCTTGACCTGCAGGAATACACGGGCGGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR-3UTR CCA 90 bp CAGATGCTCCCACGTGGTCCATTCCCTCATGGTGTCTCCGGGGTGGGCAGACTCGGCCCGCTCCCCTCCTaGCTGCAGCTGCACCAAGGT +
Preference number: 2 (lower is better)
Translates to: QMLPRGPFPHGVSGVGRLGPLPS*LQLHQG
Trigger: ACCTTGGTGCAGCTGCAGCCAGGAGGGGAGCGGGCC...GAGTCTGCCCACCCCGGAGACACCATGAGGGAATGGACCACGTGGGAGCATCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR-3UTR GCA 90 bp TGGCTCCTGGCAGGCGCTGAGGATCAGCAGATCTGCACTGCCAGAGCCTGTCTGGGGCCCCCGCCTGGGTaGGGAACATGCTTTGGGCAT +
Preference number: 2 (lower is better)
Translates to: WLLAGAEDQQICTARACLGPPPG*GTCFGH
Trigger: ATGCCCAAAGCATGTTCCGCACCCAGGCGGGGGCCC...CAGACAGGCTCTGGCAGTGCAGATCTGCTGATCCTCAGCGCCTGCCAGGAGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR-3UTR CCA 90 bp TGCAGGTCAAGACAGATTCGGGCCGGGTGGGGTGGCAGCCCAGCCACGGAGGGCTGGCTCCTTGGCACCTaGCATGCCCATTCCCTGAAA +
Preference number: 2 (lower is better)
Translates to: CRSRQIRAGWGGSPATEGWLLGT*HAHSLK
Trigger: TTTCAGGGAATGGGCATGCCAGGTGCCAAGGAGCCA...GCCCTCCGTGGCTGGGCTGCCACCCCACCCGGCCCGAATCTGTCTTGACCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR-3UTR CCA 90 bp TGCAGGTCAAGACAGATTCGGGCCGGGTGGGGTGGCAGCCCAGCCACGGAGGGCGTGCGGAACATGCTTTaGGCATTTGCCATGAGGCGG +
Preference number: 2 (lower is better)
Translates to: CRSRQIRAGWGGSPATEGVRNML*AFAMRR
Trigger: CCGCCTCATGGCAAATGCCCAAAGCATGTTCCGCAC...GCCCTCCGTGGCTGGGCTGCCACCCCACCCGGCCCGAATCTGTCTTGACCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR-3UTR TCA 90 bp CAGATGCTCCCACGTGGTCCATTCCCTCATGGTGTCTCCGGGGTGGGCAGACTCCCCTTATCTGTCCCCTaGGCTCCCTGGCTCCCCAGA +
Preference number: 2 (lower is better)
Translates to: QMLPRGPFPHGVSGVGRLPLSVP*APWLPR
Trigger: TCTGGGGAGCCAGGGAGCTCAGGGGACAGATAAGGG...GAGTCTGCCCACCCCGGAGACACCATGAGGGAATGGACCACGTGGGAGCATCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR-3UTR GCA 90 bp CACTTCCCGCCAGGCTCAGGGGCCTGGAGTCAGGGGGCGTCCTTCCCTTATCTGGGCGGCTGGGAGTTTTaGAACAGTTTCCAGGGGAGC +
Preference number: 2 (lower is better)
Translates to: HFPPGSGAWSQGASFPYLGGWEF*NSFQGS
Trigger: GCTCCCCTGGAAACTGTTGCAAAACTCCCAGCCGCC...CAGATAAGGGAAGGACGCCCCCTGACTCCAGGCCCCTGAGCCTGGCGGGAAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR-3UTR CCA 90 bp CGGTGCTCTTCAGAGCGGCGAGGTCCTCCCCCGCGGGGAGGAATGTGGGAGAGGAAACCCAGTCTGGTGTaGTCAACATGCCGCAGTCTC +
Preference number: 2 (lower is better)
Translates to: RCSSERRGPPPRGGMWERKPSLV*STCRSL
Trigger: GAGACTGCGGCATGTTGACCACACCAGACTGGGTTT...CCTCTCCCACATTCCTCCCCGCGGGGGAGGACCTCGCCGCTCTGAAGAGCACCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
3UTR-3UTR GCA 90 bp TTGTGCACCCACATGTGCACGGTGCTCTTCAGAGCGGCGAGGTCCTCCCCCGCGCCGCCCGTGTATTCCTaGAGGTCAAGACAGATTCGG +
Preference number: 2 (lower is better)
Translates to: LCTHMCTVLFRAARSSPAPPVYS*RSRQIR
Trigger: CCGAATCTGTCTTGACCTGCAGGAATACACGGGCGG...CGCGGGGGAGGACCTCGCCGCTCTGAAGAGCACCGTGCACATGTGGGTGCACAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR-3UTR CCA 90 bp CACGGTGCTCTTCAGAGCGGCGAGGTCCTCCCCCGCGGGGAGGAATGTGGGAGAATCTGTTTGGCTCCTTaGCACCTGGCATGCCCATTC +
Preference number: 2 (lower is better)
Translates to: HGALQSGEVLPRGEECGRICLAP*HLACPF
Trigger: GAATGGGCATGCCAGGTGCCAAGGAGCCAAACAGAT...TCTCCCACATTCCTCCCCGCGGGGGAGGACCTCGCCGCTCTGAAGAGCACCGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
3UTR-3UTR CCA 90 bp CGGTGCTCTTCAGAGCGGCGAGGTCCTCCCCCGCGGGGAGGAATGTGGGAGAGGAAGGACCTTGCTGCCTaGAAAGCCATCTGTTTGGCT +
Preference number: 2 (lower is better)
Translates to: RCSSERRGPPPRGGMWERKDLAA*KAICLA
Trigger: AGCCAAACAGATGGCTTTCCAGGCAGCAAGGTCCTT...CCTCTCCCACATTCCTCCCCGCGGGGGAGGACCTCGCCGCTCTGAAGAGCACCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
3UTR-3UTR TCA 90 bp GTGCTGTCCGGGGAAGACACCGTGCAAATGCCAAAGTGCACTGAGGAGAGGGGATGTGTAGTCCCGCTGTaGGGTAATGCCTGGCGCCGC +
Preference number: 2 (lower is better)
Translates to: VLSGEDTVQMPKCTEERGCVVPL*GNAWRR
Trigger: GCGGCGCCAGGCATTACCTCACAGCGGGACTACACA...TCCCCTCTCCTCAGTGCACTTTGGCATTTGCACGGTGTCTTCCCCGGACAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR-3UTR GCA 90 bp CAGTTCATCCACGGAGATCTGCGCCCCGTCCACACCAACACCCACGTTTGTGCAGGTCTGGGGTCTGGGTaGTCACCTGGCTGTCACCCA +
Preference number: 2 (lower is better)
Translates to: QFIHGDLRPVHTNTHVCAGLGSG*SPGCHP
Trigger: TGGGTGACAGCCAGGTGAGCACCCAGACCCCAGACC...TGCACAAACGTGGGTGTTGGTGTGGACGGGGCGCAGATCTCCGTGGATGAACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR-3UTR GCA 90 bp GAGAGTCTCCAGGATCTTGTGCTGCAGCAGGTACTCCAGGCAGGGCCCTGCCTCGCGGCCGCCTGCTGCTaGTCTTCATACACCAGGATA +
Preference number: 2 (lower is better)
Translates to: ESLQDLVLQQVLQAGPCLAAACC*SSYTRI
Trigger: TATCCTGGTGTATGAAGAGCAGCAGCAGGCGGCCGC...GAGGCAGGGCCCTGCCTGGAGTACCTGCTGCAGCACAAGATCCTGGAGACTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427751.5
3UTR-3UTR GCA 90 bp TGGGTCCTGCTGGATCTTGGAGCAGAGGACGGTGGTGAACTGCACCTCCTCCTTTCACCCGCGGCCGCCTaGTGCTGCTCTTCATACACC +
Preference number: 2 (lower is better)
Translates to: WVLLDLGAEDGGELHLLLSPAAA*CCSSYT
Trigger: GGTGTATGAAGAGCAGCAGCAGGCGGCCGCGGGTGA...AAGGAGGAGGTGCAGTTCACCACCGTCCTCTGCTCCAAGATCCAGCAGGACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427751.5
3UTR-3UTR CCA 90 bp GTCCACGCAATCACACCATTTATTGCTGTGCTGTCCGGGGAAGACACCGTGCAACCAGGACTGGCTGCCTaGGCCGCAGCCACTTCCCGC +
Preference number: 2 (lower is better)
Translates to: VHAITPFIAVLSGEDTVQPGLAA*AAATSR
Trigger: GCGGGAAGTGGCTGCGGCCCAGGCAGCCAGTCCTGG...TTGCACGGTGTCTTCCCCGGACAGCACAGCAATAAATGGTGTGATTGCGTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR-3UTR CCA 90 bp AGAGTCCAGACGCAGTTCATCCACGGAGATCTGCGCCCCGTCCACACCAACACCCCTGTGCCTGGCTTCTaGCTGTCACCCAAGCTCCTC +
Preference number: 2 (lower is better)
Translates to: RVQTQFIHGDLRPVHTNTPVPGF*LSPKLL
Trigger: GAGGAGCTTGGGTGACAGCCAGAAGCCAGGCACAGG...GGTGTTGGTGTGGACGGGGCGCAGATCTCCGTGGATGAACTGCGTCTGGACTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450006.7
3UTR-3UTR TCA 90 bp TCTCGGAGCCATCAGCTCACTCCCCATCTTGCCCCTGGAGTTGAGTCACAGGCTATGCCGCAGTCTCCTTaGGTGAGCCCGGGAGCAGAA +
Preference number: 2 (lower is better)
Translates to: SRSHQLTPHLAPGVESQAMPQSP*VSPGAE
Trigger: TTCTGCTCCCGGGCTCACTCAAGGAGACTGCGGCAT...AGCCTGTGACTCAACTCCAGGGGCAAGATGGGGAGTGAGCTGATGGCTCCGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR-3UTR TCA 90 bp GATGCTCCCACGTGGTCCATTCCCTCATGGTGTCTCCGGGGTGGGCAGACTCTCAGAGGGGAGGGTCTGTaGCTCCCAAACCCTCGAATA +
Preference number: 2 (lower is better)
Translates to: DAPTWSIPSWCLRGGQTLRGEGL*LPNPRI
Trigger: TATTCGAGGGTTTGGGAGTCACAGACCCTCCCCTCT...GAGAGTCTGCCCACCCCGGAGACACCATGAGGGAATGGACCACGTGGGAGCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR-3UTR GCA 90 bp GTCTCCAGGATCTTGTGCTGCAGCAGGTACTCCAGGCAGGGCCCTGCCTCACCCAGGATATCCAGCATCTaGTTCAGCCGCCAGGGAATG +
Preference number: 2 (lower is better)
Translates to: VSRILCCSRYSRQGPASPRISSI*FSRQGM
Trigger: CATTCCCTGGCGGCTGAAGCAGATGCTGGATATCCT...GGGTGAGGCAGGGCCCTGCCTGGAGTACCTGCTGCAGCACAAGATCCTGGAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427751.5
3UTR-3UTR GCA 90 bp TACCTTCCAGGATGTAGGCGAGCAGCTCTGGGTCCTGCTGGATCTTGGAGCAGAGGGGGTACTCGGCCTTaGCCAGCGTGCAGAGAGTCT +
Preference number: 2 (lower is better)
Translates to: YLPGCRRAALGPAGSWSRGGTRP*PACRES
Trigger: AGACTCTCTGCACGCTGGGCAAGGCCGAGTACCCCC...TCTGCTCCAAGATCCAGCAGGACCCAGAGCTGCTCGCCTACATCCTGGAAGGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427751.5
3UTR-3UTR CCA 90 bp TCCGGGGAAGACACCGTGCAAATGCCAAAGTGCACTGAGGAGAGGGGAGGGTCTGTCTGGGTGCTCACCTaGCTGTCACCCAAGCTCCTC +
Preference number: 2 (lower is better)
Translates to: SGEDTVQMPKCTEERGGSVWVLT*LSPKLL
Trigger: GAGGAGCTTGGGTGACAGCCAGGTGAGCACCCAGAC...AGACCCTCCCCTCTCCTCAGTGCACTTTGGCATTTGCACGGTGTCTTCCCCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR-3UTR CCA 90 bp GAGTCTGGCTCCTGGCAGGCGCTGAGGATCAGCAGATCTGCACTGCCAGAGCCTGTCCTGGGCAGAAGGTaGGGAAACTTGGCCAAGAAC +
Preference number: 2 (lower is better)
Translates to: ESGSWQALRISRSALPEPVLGRR*GNLAKN
Trigger: GTTCTTGGCCAAGTTTCCCCACCTTCTGCCCAGGAC...AGGCTCTGGCAGTGCAGATCTGCTGATCCTCAGCGCCTGCCAGGAGCCAGACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR CAA 90 bp TCACCTGGCTGTCACCCAAGCTCCTCCAAGAAGGCCCCAAGGACCTaGCTGCCTGGAAAGCCATCTGTTTGGCTCCTTGGCACCTGGCAT +
Preference number: 2 (lower is better)
Translates to: SPGCHPSSSKKAPRT*LPGKPSVWLLGTWH
Trigger: ATGCCAGGTGCCAAGGAGCCAAACAGATGGCTTTCCAGGCAGCAAGGTCCTTGGGGCCTTCTTGGAGGAGCTTGGGTGACAGCCAGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR CAA 90 bp ACCAGTCTCGGAGCCATCAGCTCACTCCCCATCTTGCCCCTGGAGTaGAGTCACAGGCTTGGCCCTGGCCACAAATGGCCAGTACAGAAG +
Preference number: 2 (lower is better)
Translates to: TSLGAISSLPILPLE*SHRLGPGHKWPVQK
Trigger: CTTCTGTACTGGCCATTTGTGGCCAGGGCCAAGCCTGTGACTCAACTCCAGGGGCAAGATGGGGAGTGAGCTGATGGCTCCGAGACTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR CAA 90 bp GTGCGGAACATGCTTTGGGCATTTGCCATGAGGCGGCTGGGAGTTTaGCAACAGTTTCCAGGGGAGCAGAGCAGGAAGAGGGGCTTCCCC +
Preference number: 2 (lower is better)
Translates to: VRNMLWAFAMRRLGV*QQFPGEQSRKRGFP
Trigger: GGGGAAGCCCCTCTTCCTGCTCTGCTCCCCTGGAAACTGTTGCAAAACTCCCAGCCGCCTCATGGCAAATGCCCAAAGCATGTTCCGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR CAA 90 bp GCTTCTGGCTGTCACCCAAGCTCCTCCAAGAAGGCCCCAAGGACCTaGCTGCCTGGAAAGCCATCTGTTTGGCTCCTTGGCACCTGGCAT +
Preference number: 2 (lower is better)
Translates to: ASGCHPSSSKKAPRT*LPGKPSVWLLGTWH
Trigger: ATGCCAGGTGCCAAGGAGCCAAACAGATGGCTTTCCAGGCAGCAAGGTCCTTGGGGCCTTCTTGGAGGAGCTTGGGTGACAGCCAGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450006.7
3UTR-3UTR GCA 90 bp TACCTTCCAGGATGTAGGCGAGCAGCTCTGGGTCCTGCTGGATCTTGGAGCAGAAGGGGGTGCTGCACCTaGGCCAGAACCTTGCTGAAG +
Preference number: 2 (lower is better)
Translates to: YLPGCRRAALGPAGSWSRRGCCT*ARTLLK
Trigger: CTTCAGCAAGGTTCTGGCGCAGGTGCAGCACCCCCT...TCTGCTCCAAGATCCAGCAGGACCCAGAGCTGCTCGCCTACATCCTGGAAGGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427751.5
3UTR CAA 90 bp CTCCAAGAAGGCCCCAAGGACCTTGCTGCCTGGAAAGCCATCTGTTaGGCTCCTTGGCACCTGGCATGCCCATTCCCTGAAACCCAGTCT +
Preference number: 2 (lower is better)
Translates to: LQEGPKDLAAWKAIC*APWHLACPFPETQS
Trigger: AGACTGGGTTTCAGGGAATGGGCATGCCAGGTGCCAAGGAGCCAAACAGATGGCTTTCCAGGCAGCAAGGTCCTTGGGGCCTTCTTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
3UTR CAA 90 bp GGAGAGGCAGAGGTCACTGAGTTTCCTCCTGTTTCGTGTCACCTCTaGGCAACCTGTGCCTGGCTTCTGGCTGTCACCCAAGCTCCTCCA +
Preference number: 2 (lower is better)
Translates to: GEAEVTEFPPVSCHL*ATCAWLLAVTQAPP
Trigger: TGGAGGAGCTTGGGTGACAGCCAGAAGCCAGGCACAGGTTGCCAAGAGGTGACACGAAACAGGAGGAAACTCAGTGACCTCTGCCTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450006.7
3UTR-3UTR GCA 90 bp AGTCCAGACGCAGTTCATCCACGGAGATCTGCGCCCCGTCCACACCAACACCCACCCCAAGGACCTTGCTaGCTGGAAAGCCATCTGTTT +
Preference number: 2 (lower is better)
Translates to: SPDAVHPRRSAPRPHQHPPQGPC*LESHLF
Trigger: AAACAGATGGCTTTCCAGGCAGCAAGGTCCTTGGGG...TGGGTGTTGGTGTGGACGGGGCGCAGATCTCCGTGGATGAACTGCGTCTGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
3UTR-3UTR GCA 90 bp GTGCTGTCCGGGGAAGACACCGTGCAAATGCCAAAGTGCACTGAGGAGAGGGGATTGTGCACCCACATGTaGACGGTGCTCTTCAGAGCG +
Preference number: 2 (lower is better)
Translates to: VLSGEDTVQMPKCTEERGLCTHM*TVLFRA
Trigger: CGCTCTGAAGAGCACCGTGCACATGTGGGTGCACAA...TCCCCTCTCCTCAGTGCACTTTGGCATTTGCACGGTGTCTTCCCCGGACAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
3UTR-3UTR CCA 90 bp TGTCACCTCTTGGCAACCTGTGCCTGGCTTCTGGCTGTCACCCAAGCTCCTCCATGGCTCCTTGGCACCTaGCATGCCCATTCCCTGAAA +
Preference number: 2 (lower is better)
Translates to: CHLLATCAWLLAVTQAPPWLLGT*HAHSLK
Trigger: TTTCAGGGAATGGGCATGCCAGGTGCCAAGGAGCCA...TGGAGGAGCTTGGGTGACAGCCAGAAGCCAGGCACAGGTTGCCAAGAGGTGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450006.7
3UTR-3UTR CCA 90 bp ATGCCAAAGTGCACTGAGGAGAGGGGAGGGTCTGTGACTCCCAAACCCTCGAATCAGCACATGAGGGTCTaGGGTCTGGGTGCTCACCTG +
Preference number: 2 (lower is better)
Translates to: MPKCTEERGGSVTPKPSNQHMRV*GLGAHL
Trigger: CAGGTGAGCACCCAGACCCCAGACCCTCATGTGCTG...ATTCGAGGGTTTGGGAGTCACAGACCCTCCCCTCTCCTCAGTGCACTTTGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR-3UTR TCA 90 bp AGACGCAGTTCATCCACGGAGATCTGCGCCCCGTCCACACCAACACCCACGTTTAGAGGCAGAGGTCACTaGGTTTCCTCCTGTTTCGTG +
Preference number: 2 (lower is better)
Translates to: RRSSSTEICAPSTPTPTFRGRGH*VSSCFV
Trigger: CACGAAACAGGAGGAAACTCAGTGACCTCTGCCTCT...AAACGTGGGTGTTGGTGTGGACGGGGCGCAGATCTCCGTGGATGAACTGCGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
3UTR-3UTR GCA 90 bp TCCTTGTCCCCGTGGCTGGTTGTGTCCTTAGGCAGGGCAGTGGGTTCTCCGCATGGGTGCTTTCATCTGTaGTCTCGATGTAGTAGTGCG +
Preference number: 2 (lower is better)
Translates to: SLSPWLVVSLGRAVGSPHGCFHL*SRCSSA
Trigger: CGCACTACTACATCGAGAGCACAGATGAAAGCACCC...ATGCGGAGAACCCACTGCCCTGCCTAAGGACACAACCAGCCACGGGGACAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427751.5
3UTR-3UTR GCA 90 bp TACCTTCCAGGATGTAGGCGAGCAGCTCTGGGTCCTGCTGGATCTTGGAGCAGAGTCTCCAGGATCTTGTaGTGCAGCAGGTACTCCAGG +
Preference number: 2 (lower is better)
Translates to: YLPGCRRAALGPAGSWSRVSRIL*CSRYSR
Trigger: CCTGGAGTACCTGCTGCAGCACAAGATCCTGGAGAC...TCTGCTCCAAGATCCAGCAGGACCCAGAGCTGCTCGCCTACATCCTGGAAGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427751.5
3UTR-3UTR CCA 90 bp GACACCGTGCAAATGCCAAAGTGCACTGAGGAGAGGGGAGGGTCTGTGACTCCCAAACCCAGTCTGGTGTaGTCAACATGCCGCAGTCTC +
Preference number: 2 (lower is better)
Translates to: DTVQMPKCTEERGGSVTPKPSLV*STCRSL
Trigger: GAGACTGCGGCATGTTGACCACACCAGACTGGGTTT...GGGAGTCACAGACCCTCCCCTCTCCTCAGTGCACTTTGGCATTTGCACGGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
3UTR-3UTR CCA 90 bp GTGCTGTCCGGGGAAGACACCGTGCAAATGCCAAAGTGCACTGAGGAGAGGGGAGGAAAGCCATCTGTTTaGCTCCTTGGCACCTGGCAT +
Preference number: 2 (lower is better)
Translates to: VLSGEDTVQMPKCTEERGGKPSV*LLGTWH
Trigger: ATGCCAGGTGCCAAGGAGCCAAACAGATGGCTTTCC...TCCCCTCTCCTCAGTGCACTTTGGCATTTGCACGGTGTCTTCCCCGGACAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
3UTR-3UTR CCA 90 bp AGGGGGTGCTGCACCTGCGCCAGAACCTTGCTGAAGAACTGGAACACCTGCTGCGAATGTCTGTCTTCTTaGCGGGGGTGCTTTCATCTG +
Preference number: 2 (lower is better)
Translates to: RGCCTCARTLLKNWNTCCECLSS*RGCFHL
Trigger: CAGATGAAAGCACCCCCGCCAAGAAGACAGACATTC...GCAGCAGGTGTTCCAGTTCTTCAGCAAGGTTCTGGCGCAGGTGCAGCACCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000427751.5
3UTR CAA 90 bp TGGGCCCGAATTAGCAGTGGAGTCCTGGGCAGAAGGTGGGGAAACTaGGCCAAGAACAGAGCCACGGTGTCCACGCAATCACACCATTTA +
Preference number: 2 (lower is better)
Translates to: WARISSGVLGRRWGN*AKNRATVSTQSHHL
Trigger: TAAATGGTGTGATTGCGTGGACACCGTGGCTCTGTTCTTGGCCAAGTTTCCCCACCTTCTGCCCAGGACTCCACTGCTAATTCGGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR-3UTR GCA 90 bp TATGAATCTAAGAGTCCAGACGCAGTTCATCCACGGAGATCTGCGCCCCGTCCACCTTGGCACCTGGCATaGCCATTCCCTGAAACCCAG +
Preference number: 2 (lower is better)
Translates to: YESKSPDAVHPRRSAPRPPWHLA*PFPETQ
Trigger: CTGGGTTTCAGGGAATGGGCATGCCAGGTGCCAAGG...TGGACGGGGCGCAGATCTCCGTGGATGAACTGCGTCTGGACTCTTAGATTCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
3UTR-3UTR GCA 90 bp CTTAGGCAGGGCAGTGGGTTCTCCGCATGCTTTCTTCCTACCTACAATCTTTTTCCCGCGGCCGCCTGCTaGTGCTCTTCATACACCAGG +
Preference number: 2 (lower is better)
Translates to: LRQGSGFSACFLPTYNLFPAAAC*CSSYTR
Trigger: CCTGGTGTATGAAGAGCAGCAGCAGGCGGCCGCGGG...AAAAAGATTGTAGGTAGGAAGAAAGCATGCGGAGAACCCACTGCCCTGCCTAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427751.5
3UTR-3UTR GCA 90 bp CTGCTGGATCTTGGAGCAGAGGACGGTGGTGAACTGCACCTCCTCCTTTTCTGTTCCAGGATCTTGTGCTaGAGCAGGTACTCCAGGCAG +
Preference number: 2 (lower is better)
Translates to: LLDLGAEDGGELHLLLFCSRILC*SRYSRQ
Trigger: CTGCCTGGAGTACCTGCTGCAGCACAAGATCCTGGA...ACAGAAAAGGAGGAGGTGCAGTTCACCACCGTCCTCTGCTCCAAGATCCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427751.5
3UTR-3UTR GCA 90 bp GTCCACGCAATCACACCATTTATTGCTGTGCTGTCCGGGGAAGACACCGTGCAACCTCTTGGCAACCTGTaGCTGGCTTCTGGCTGTCAC +
Preference number: 2 (lower is better)
Translates to: VHAITPFIAVLSGEDTVQPLGNL*LASGCH
Trigger: GTGACAGCCAGAAGCCAGGCACAGGTTGCCAAGAGG...TTGCACGGTGTCTTCCCCGGACAGCACAGCAATAAATGGTGTGATTGCGTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450006.7
3UTR-3UTR CCA 90 bp TCCGGGGAAGACACCGTGCAAATGCCAAAGTGCACTGAGGAGAGGGGAGGGTCTAAGGACCTTGCTGCCTaGAAAGCCATCTGTTTGGCT +
Preference number: 2 (lower is better)
Translates to: SGEDTVQMPKCTEERGGSKDLAA*KAICLA
Trigger: AGCCAAACAGATGGCTTTCCAGGCAGCAAGGTCCTT...AGACCCTCCCCTCTCCTCAGTGCACTTTGGCATTTGCACGGTGTCTTCCCCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
3UTR CAA 90 bp GGAGAGGCAGAGGTCACTGAGTTTCCTCCTGTTTCGTGTCACCTCTaGGCAACCTGTGCCTGGCTTCTAGAAGCGGCATGGGCAAGAAAA +
Preference number: 2 (lower is better)
Translates to: GEAEVTEFPPVSCHL*ATCAWLLEAAWARK
Trigger: TTTTCTTGCCCATGCCGCTTCTAGAAGCCAGGCACAGGTTGCCAAGAGGTGACACGAAACAGGAGGAAACTCAGTGACCTCTGCCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR-3UTR TCA 90 bp GTGTCCTTAGGCAGGGCAGTGGGTTCTCCGCATGCTTTCTTCCTACCTACAATCGCGCCAGAACCTTGCTaGAGAACTGGAACACCTGCT +
Preference number: 2 (lower is better)
Translates to: VSLGRAVGSPHAFFLPTIAPEPC*RTGTPA
Trigger: AGCAGGTGTTCCAGTTCTTCAGCAAGGTTCTGGCGC...GATTGTAGGTAGGAAGAAAGCATGCGGAGAACCCACTGCCCTGCCTAAGGACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427751.5
3UTR-3UTR GCA 90 bp TCCTGTTTCGTGTCACCTCTTGGCAACCTGTGCCTGGCTTCTAGAAGCGGCATGCCCCAAGGACCTTGCTaGCTGGAAAGCCATCTGTTT +
Preference number: 2 (lower is better)
Translates to: SCFVSPLGNLCLASRSGMPQGPC*LESHLF
Trigger: AAACAGATGGCTTTCCAGGCAGCAAGGTCCTTGGGG...CATGCCGCTTCTAGAAGCCAGGCACAGGTTGCCAAGAGGTGACACGAAACAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR-3UTR GCA 90 bp GTGCGGAACATGCTTTGGGCATTTGCCATGAGGCGGCTGGGAGTTTTGCAACAGGACGATCCCATTCACTaGTCCTTCTCCATGGGCCAA +
Preference number: 2 (lower is better)
Translates to: VRNMLWAFAMRRLGVLQQDDPIH*SFSMGQ
Trigger: TTGGCCCATGGAGAAGGAGCAGTGAATGGGATCGTC...CTGTTGCAAAACTCCCAGCCGCCTCATGGCAAATGCCCAAAGCATGTTCCGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR CAA 90 bp TTGGCCAAGAACAGAGCCACGGTGTCCACGCAATCACACCATTTATaGCTGTGCTGTCCGGGGAAGACACCGTGCAAATGCCAAAGTGCA +
Preference number: 2 (lower is better)
Translates to: LAKNRATVSTQSHHL*LCCPGKTPCKCQSA
Trigger: TGCACTTTGGCATTTGCACGGTGTCTTCCCCGGACAGCACAGCAATAAATGGTGTGATTGCGTGGACACCGTGGCTCTGTTCTTGGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR-3UTR GCA 90 bp AGGGCAGTGGGTTCTCCGCATGCTTTCTTCCTACCTACAATCTTTTTACCTTCCCGGCCTTGCCCAGCGTaGAGAGAGTCTCCAGGATCT +
Preference number: 2 (lower is better)
Translates to: RAVGSPHAFFLPTIFLPSRPCPA*RESPGS
Trigger: AGATCCTGGAGACTCTCTGCACGCTGGGCAAGGCCG...GGAAGGTAAAAAGATTGTAGGTAGGAAGAAAGCATGCGGAGAACCCACTGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427751.5
3UTR-3UTR GCA 90 bp GGTTGTGTCCTTAGGCAGGGCAGTGGGTTCTCCGCATGCTTTCTTCCTACCTACAGGACGGTGGTGAACTaGACCTCCTCCTTTTCTGTA +
Preference number: 2 (lower is better)
Translates to: GCVLRQGSGFSACFLPTYRTVVN*TSSFSV
Trigger: TACAGAAAAGGAGGAGGTGCAGTTCACCACCGTCCT...GTAGGTAGGAAGAAAGCATGCGGAGAACCCACTGCCCTGCCTAAGGACACAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427751.5
3UTR-3UTR CCA 90 bp CACGCAATCACACCATTTATTGCTGTGCTGTCCGGGGAAGACACCGTGCAAATGGGAAAGCCATCTGTTTaGCTCCTTGGCACCTGGCAT +
Preference number: 2 (lower is better)
Translates to: HAITPFIAVLSGEDTVQMGKPSV*LLGTWH
Trigger: ATGCCAGGTGCCAAGGAGCCAAACAGATGGCTTTCC...CATTTGCACGGTGTCTTCCCCGGACAGCACAGCAATAAATGGTGTGATTGCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
3UTR-3UTR CCA 90 bp ATCACACCATTTATTGCTGTGCTGTCCGGGGAAGACACCGTGCAAATGCCAAAGTTGGCAACCTGTGCCTaGCTTCTGGCTGTCACCCAA +
Preference number: 2 (lower is better)
Translates to: ITPFIAVLSGEDTVQMPKLATCA*LLAVTQ
Trigger: TTGGGTGACAGCCAGAAGCCAGGCACAGGTTGCCAA...CTTTGGCATTTGCACGGTGTCTTCCCCGGACAGCACAGCAATAAATGGTGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450006.7
3UTR-3UTR GCA 90 bp CCAAATGAGACTTGCACACAGATGCTCCCACGTGGTCCATTCCCTCATGGTGTCAAGACACCGTGCAAATaGCAAAGTGCACTGAGGAGA +
Preference number: 2 (lower is better)
Translates to: PNETCTQMLPRGPFPHGVKTPCK*QSALRR
Trigger: TCTCCTCAGTGCACTTTGGCATTTGCACGGTGTCTT...GACACCATGAGGGAATGGACCACGTGGGAGCATCTGTGTGCAAGTCTCATTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR-3UTR GCA 90 bp TGTGACTCCCAAACCCTCGAATATTTTATGAATCTAAGAGTCCAGACGCAGTTCAGGCCCCAAGGACCTTaGTGCCTGGAAAGCCATCTG +
Preference number: 2 (lower is better)
Translates to: CDSQTLEYFMNLRVQTQFRPQGP*CLESHL
Trigger: CAGATGGCTTTCCAGGCAGCAAGGTCCTTGGGGCCT...GAACTGCGTCTGGACTCTTAGATTCATAAAATATTCGAGGGTTTGGGAGTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
3UTR GCA 72 bp CGGAGGGCATGCAGGGAGAACACCACCAGGACTGGCTaGCTGGGCCGCAGCCACTTCCCGCCAGGCTCAGGG +
Preference number: 3 (lower is better)
Translates to: RRACRENTTRTG*LGRSHFPPGSG
Trigger: CCCTGAGCCTGGCGGGAAGTGGCTGCGGCCCAGGCAGCCAGTCCTGGTGGTGTTCTCCCTGCATGCCCTCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR CCA 72 bp GGGCATGCAGGGAGAACACCACCAGGACTGGCTGCCTaGGCCGCAGCCACTTCCCGCCAGGCTCAGGGGCCT +
Preference number: 3 (lower is better)
Translates to: GHAGRTPPGLAA*AAATSRQAQGP
Trigger: AGGCCCCTGAGCCTGGCGGGAAGTGGCTGCGGCCCAGGCAGCCAGTCCTGGTGGTGTTCTCCCTGCATGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR CCA 72 bp GCCACGGAGGGCATGCAGGGAGAACACCACCAGGACTaGCTGCCTGGGCCGCAGCCACTTCCCGCCAGGCTC +
Preference number: 3 (lower is better)
Translates to: ATEGMQGEHHQD*LPGPQPLPARL
Trigger: GAGCCTGGCGGGAAGTGGCTGCGGCCCAGGCAGCCAGTCCTGGTGGTGTTCTCCCTGCATGCCCTCCGTGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR-3UTR CAA 90 bp TTGTGCACCCACATGTGCACGGTGCTCTTCAGAGCGGCGAGGTCCTCCCCCGCGCATGCCGCAGTCTCCTaGAGTGAGCCCGGGAGCAGA +
Preference number: 3 (lower is better)
Translates to: LCTHMCTVLFRAARSSPAHAAVS*SEPGSR
Trigger: TCTGCTCCCGGGCTCACTCAAGGAGACTGCGGCATG...CGCGGGGGAGGACCTCGCCGCTCTGAAGAGCACCGTGCACATGTGGGTGCACAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
3UTR TCA 72 bp GCAGCAGGGGGTGCTGCACCTGCGCCAGAACCTTGCTaGAGAACTGGAACACCTGCTGCCGCATGCCTGGGG +
Preference number: 3 (lower is better)
Translates to: AAGGAAPAPEPC*RTGTPAAACLG
Trigger: CCCCAGGCATGCGGCAGCAGGTGTTCCAGTTCTTCAGCAAGGTTCTGGCGCAGGTGCAGCACCCCCTGCTGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427751.5
3UTR CCA 72 bp TTCCTGCAGGTCAAGACAGATTCGGGCCGGGTGGGGTaGCAGCCCAGCCACGGAGGGCATGCAGGGAGAACA +
Preference number: 3 (lower is better)
Translates to: FLQVKTDSGRVG*QPSHGGHAGRT
Trigger: TGTTCTCCCTGCATGCCCTCCGTGGCTGGGCTGCCACCCCACCCGGCCCGAATCTGTCTTGACCTGCAGGAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR GCA 72 bp CGTCCACACCAACACCCACGTTTGTGCACCCACATGTaGACGGTGCTCTTCAGAGCGGCGAGGTCCTCCCCC +
Preference number: 3 (lower is better)
Translates to: RPHQHPRLCTHM*TVLFRAARSSP
Trigger: GGGGGAGGACCTCGCCGCTCTGAAGAGCACCGTGCACATGTGGGTGCACAAACGTGGGTGTTGGTGTGGACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
3UTR GCA 72 bp GTCTGGCTCCTGGCAGGCGCTGAGGATCAGCAGATCTaGACTGCCAGAGCCTGTCTGTTTACCGCCCACCCC +
Preference number: 3 (lower is better)
Translates to: VWLLAGAEDQQI*TARACLFTAHP
Trigger: GGGGTGGGCGGTAAACAGACAGGCTCTGGCAGTGCAGATCTGCTGATCCTCAGCGCCTGCCAGGAGCCAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR GCA 72 bp AGGCAGGGCCCTGCCTCACCCGCGGCCGCCTGCTGCTaGTCTTCATACACCAGGATATCCAGCATCTGCTTC +
Preference number: 3 (lower is better)
Translates to: RQGPASPAAACC*SSYTRISSICF
Trigger: GAAGCAGATGCTGGATATCCTGGTGTATGAAGAGCAGCAGCAGGCGGCCGCGGGTGAGGCAGGGCCCTGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427751.5
3UTR GCA 72 bp TTGCCCAGCGTGCAGAGAGTCTCCAGGATCTTGTGCTaGAGCAGGTACTCCAGGCAGGGCCCTGCCTCACCC +
Preference number: 3 (lower is better)
Translates to: LPSVQRVSRILC*SRYSRQGPASP
Trigger: GGGTGAGGCAGGGCCCTGCCTGGAGTACCTGCTGCAGCACAAGATCCTGGAGACTCTCTGCACGCTGGGCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427751.5
3UTR CCA 72 bp TCCCACGTGGTCCATTCCCTCATGGTGTCTCCGGGGTaGGCAGACTCTCCGCTGCAGGTCAGCCCAGCAGAA +
Preference number: 3 (lower is better)
Translates to: SHVVHSLMVSPG*ADSPLQVSPAE
Trigger: TTCTGCTGGGCTGACCTGCAGCGGAGAGTCTGCCCACCCCGGAGACACCATGAGGGAATGGACCACGTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR-3UTR CAA 90 bp TCCCGCCAGGCTCAGGGGCCTGGAGTCAGGGGGCGTCCTTCCCTTATCTGTCCCCATCTGTTTGGCTCCTaGGCACCTGGCATGCCCATT +
Preference number: 3 (lower is better)
Translates to: SRQAQGPGVRGRPSLICPHLFGS*APGMPI
Trigger: AATGGGCATGCCAGGTGCCAAGGAGCCAAACAGATG...GGGACAGATAAGGGAAGGACGCCCCCTGACTCCAGGCCCCTGAGCCTGGCGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR TCA 72 bp ACCCAGTCTGGTGTGGTCAACATGCCGCAGTCTCCTTaGGTGAGCCCGGGAGCAGAAGCCCCATCCCAGGAG +
Preference number: 3 (lower is better)
Translates to: TQSGVVNMPQSP*VSPGAEAPSQE
Trigger: CTCCTGGGATGGGGCTTCTGCTCCCGGGCTCACTCAAGGAGACTGCGGCATGTTGACCACACCAGACTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
3UTR TCA 72 bp CACTGCTCCGCCAAGAGTCTGGCTCCTGGCAGGCGCTaGGGATCAGCAGATCTGCACTGCCAGAGCCTGTCT +
Preference number: 3 (lower is better)
Translates to: HCSAKSLAPGRR*GSADLHCQSLS
Trigger: AGACAGGCTCTGGCAGTGCAGATCTGCTGATCCTCAGCGCCTGCCAGGAGCCAGACTCTTGGCGGAGCAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR GCA 72 bp AGATCTGCGCCCCGTCCACACCAACACCCACGTTTGTaGACCCACATGTGCACGGTGCTCTTCAGAGCGGCG +
Preference number: 3 (lower is better)
Translates to: RSAPRPHQHPRL*THMCTVLFRAA
Trigger: CGCCGCTCTGAAGAGCACCGTGCACATGTGGGTGCACAAACGTGGGTGTTGGTGTGGACGGGGCGCAGATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
3UTR CCA 72 bp GCAGAAGTGGCACTGCTCCGCCAAGAGTCTGGCTCCTaGCAGGCGCTGAGGATCAGCAGATCTGCACTGCCA +
Preference number: 3 (lower is better)
Translates to: AEVALLRQESGS*QALRISRSALP
Trigger: TGGCAGTGCAGATCTGCTGATCCTCAGCGCCTGCCAGGAGCCAGACTCTTGGCGGAGCAGTGCCACTTCTGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR GCA 72 bp GGCCCCCGCCTGGGTGCGGAACATGCTTTGGGCATTTaGCATGAGGCGGCTGGGAGTTTTGCAACAGTTTCC +
Preference number: 3 (lower is better)
Translates to: GPRLGAEHALGI*HEAAGSFATVS
Trigger: GGAAACTGTTGCAAAACTCCCAGCCGCCTCATGGCAAATGCCCAAAGCATGTTCCGCACCCAGGCGGGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR CCA 72 bp CATCTTGCCCCTGGAGTTGAGTCACAGGCTTGGCCCTaGCCACAAATGGCCAGTACAGAAGGGGCCAGGCAC +
Preference number: 3 (lower is better)
Translates to: HLAPGVESQAWP*PQMASTEGARH
Trigger: GTGCCTGGCCCCTTCTGTACTGGCCATTTGTGGCCAGGGCCAAGCCTGTGACTCAACTCCAGGGGCAAGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR CCA 72 bp GCTGCACCAAGGTTCTCATTAGCAGGGGCCCCCGCCTaGGTGCGGAACATGCTTTGGGCATTTGCCATGAGG +
Preference number: 3 (lower is better)
Translates to: AAPRFSLAGAPA*VRNMLWAFAMR
Trigger: CCTCATGGCAAATGCCCAAAGCATGTTCCGCACCCAGGCGGGGGCCCCTGCTAATGAGAACCTTGGTGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR-3UTR CAA 90 bp TGGCTCCTGGCAGGCGCTGAGGATCAGCAGATCTGCACTGCCAGAGCCTGTCTGTGGAAAGCCATCTGTTaGGCTCCTTGGCACCTGGCA +
Preference number: 3 (lower is better)
Translates to: WLLAGAEDQQICTARACLWKAIC*APWHLA
Trigger: TGCCAGGTGCCAAGGAGCCAAACAGATGGCTTTCCA...CAGACAGGCTCTGGCAGTGCAGATCTGCTGATCCTCAGCGCCTGCCAGGAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR TCA 72 bp CCGCCTGGGTGCGGAACATGCTTTGGGCATTTGCCATaGGGCGGCTGGGAGTTTTGCAACAGTTTCCAGGGG +
Preference number: 3 (lower is better)
Translates to: PPGCGTCFGHLP*GGWEFCNSFQG
Trigger: CCCCTGGAAACTGTTGCAAAACTCCCAGCCGCCTCATGGCAAATGCCCAAAGCATGTTCCGCACCCAGGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR TCA 72 bp GTCCGGGGAAGACACCGTGCAAATGCCAAAGTGCACTaGGGAGAGGGGAGGGTCTGTGACTCCCAAACCCTC +
Preference number: 3 (lower is better)
Translates to: VRGRHRANAKVH*GEGRVCDSQTL
Trigger: GAGGGTTTGGGAGTCACAGACCCTCCCCTCTCCTCAGTGCACTTTGGCATTTGCACGGTGTCTTCCCCGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
3UTR TCA 72 bp CTGTTTGGCTCCTTGGCACCTGGCATGCCCATTCCCTaGAACCCAGTCTGGTGTGGTCAACATGCCGCAGTC +
Preference number: 3 (lower is better)
Translates to: LFGSLAPGMPIP*NPVWCGQHAAV
Trigger: GACTGCGGCATGTTGACCACACCAGACTGGGTTTCAGGGAATGGGCATGCCAGGTGCCAAGGAGCCAAACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
3UTR GCA 72 bp GTCACCCAAGCTCCTCCAAGAAGGCCCCAAGGACCTTaGTGCCTGGAAAGCCATCTGTTTGGCTCCTTGGCA +
Preference number: 3 (lower is better)
Translates to: VTQAPPRRPQGP*CLESHLFGSLA
Trigger: TGCCAAGGAGCCAAACAGATGGCTTTCCAGGCAGCAAGGTCCTTGGGGCCTTCTTGGAGGAGCTTGGGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
3UTR CCA 72 bp GCCCCAAGGACCTTGCTGCCTGGAAAGCCATCTGTTTaGCTCCTTGGCACCTGGCATGCCCATTCCCTGAAA +
Preference number: 3 (lower is better)
Translates to: APRTLLPGKPSV*LLGTWHAHSLK
Trigger: TTTCAGGGAATGGGCATGCCAGGTGCCAAGGAGCCAAACAGATGGCTTTCCAGGCAGCAAGGTCCTTGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
3UTR CCA 72 bp AAGCTCCTCCAAGAAGGCCCCAAGGACCTTGCTGCCTaGAAAGCCATCTGTTTGGCTCCTTGGCACCTGGCA +
Preference number: 3 (lower is better)
Translates to: KLLQEGPKDLAA*KAICLAPWHLA
Trigger: TGCCAGGTGCCAAGGAGCCAAACAGATGGCTTTCCAGGCAGCAAGGTCCTTGGGGCCTTCTTGGAGGAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
3UTR CCA 72 bp GACCTTGCTGCCTGGAAAGCCATCTGTTTGGCTCCTTaGCACCTGGCATGCCCATTCCCTGAAACCCAGTCT +
Preference number: 3 (lower is better)
Translates to: DLAAWKAICLAP*HLACPFPETQS
Trigger: AGACTGGGTTTCAGGGAATGGGCATGCCAGGTGCCAAGGAGCCAAACAGATGGCTTTCCAGGCAGCAAGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
3UTR CCA 72 bp TTAGCAGTGGAGTCCTGGGCAGAAGGTGGGGAAACTTaGCCAAGAACAGAGCCACGGTGTCCACGCAATCAC +
Preference number: 3 (lower is better)
Translates to: LAVESWAEGGET*PRTEPRCPRNH
Trigger: GTGATTGCGTGGACACCGTGGCTCTGTTCTTGGCCAAGTTTCCCCACCTTCTGCCCAGGACTCCACTGCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR-3UTR CAA 90 bp TGCACCTCCTCCTTTTCTGTAACGGATCCGGAAGCAGTCCCACCAAGTCGGAGGGGAATGTCTGTCTTCTaGGCGGGGGTGCTTTCATCT +
Preference number: 3 (lower is better)
Translates to: CTSSFSVTDPEAVPPSRRGMSVF*AGVLSS
Trigger: AGATGAAAGCACCCCCGCCAAGAAGACAGACATTCC...CCTCCGACTTGGTGGGACTGCTTCCGGATCCGTTACAGAAAAGGAGGAGGTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000427751.5
3UTR GCA 72 bp ACAGAGCCACGGTGTCCACGCAATCACACCATTTATTaGTGTGCTGTCCGGGGAAGACACCGTGCAAATGCC +
Preference number: 3 (lower is better)
Translates to: TEPRCPRNHTIY*CAVRGRHRANA
Trigger: GGCATTTGCACGGTGTCTTCCCCGGACAGCACAGCAATAAATGGTGTGATTGCGTGGACACCGTGGCTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR GCA 72 bp CCAGAGCCTGTCTGTTTACCGCCCACCCCACCTCCCTaGTGCAGCGCTAGAAAAAGAATTTGTCTTCCTTGG +
Preference number: 3 (lower is better)
Translates to: PEPVCLPPTPPP*CSARKRICLPW
Trigger: CCAAGGAAGACAAATTCTTTTTCTAGCGCTGCAGCAGGGAGGTGGGGTGGGCGGTAAACAGACAGGCTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR GCA 72 bp TCCTGCTGGATCTTGGAGCAGAGGACGGTGGTGAACTaGACCTCCTCCTTTTCTGTAACGGATCCGGAAGCA +
Preference number: 3 (lower is better)
Translates to: SCWILEQRTVVN*TSSFSVTDPEA
Trigger: TGCTTCCGGATCCGTTACAGAAAAGGAGGAGGTGCAGTTCACCACCGTCCTCTGCTCCAAGATCCAGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427751.5
3UTR CCA 72 bp CCTCCTGTTTCGTGTCACCTCTTGGCAACCTGTGCCTaGCTTCTAGAAGCGGCATGGGCAAGAAAAGGAAGC +
Preference number: 3 (lower is better)
Translates to: PPVSCHLLATCA*LLEAAWARKGS
Trigger: GCTTCCTTTTCTTGCCCATGCCGCTTCTAGAAGCCAGGCACAGGTTGCCAAGAGGTGACACGAAACAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR CCA 72 bp GCATCTGCTTCAGCCGCCAGGGAATGTCTGTCTTCTTaGCGGGGGTGCTTTCATCTGTGCTCTCGATGTAGT +
Preference number: 3 (lower is better)
Translates to: ASASAARECLSS*RGCFHLCSRCS
Trigger: ACTACATCGAGAGCACAGATGAAAGCACCCCCGCCAAGAAGACAGACATTCCCTGGCGGCTGAAGCAGATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427751.5
3UTR CCA 72 bp AGGTCACTGAGTTTCCTCCTGTTTCGTGTCACCTCTTaGCAACCTGTGCCTGGCTTCTGGCTGTCACCCAAG +
Preference number: 3 (lower is better)
Translates to: RSLSFLLFRVTS*QPVPGFWLSPK
Trigger: CTTGGGTGACAGCCAGAAGCCAGGCACAGGTTGCCAAGAGGTGACACGAAACAGGAGGAAACTCAGTGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450006.7
3UTR-3UTR CAA 90 bp TATGAATCTAAGAGTCCAGACGCAGTTCATCCACGGAGATCTGCGCCCCGTCCACATCTGTTTGGCTCCTaGGCACCTGGCATGCCCATT +
Preference number: 3 (lower is better)
Translates to: YESKSPDAVHPRRSAPRPHLFGS*APGMPI
Trigger: AATGGGCATGCCAGGTGCCAAGGAGCCAAACAGATG...TGGACGGGGCGCAGATCTCCGTGGATGAACTGCGTCTGGACTCTTAGATTCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
3UTR-3UTR CAA 90 bp CACGCAATCACACCATTTATTGCTGTGCTGTCCGGGGAAGACACCGTGCAAATGATCTTGCCCCTGGAGTaGAGTCACAGGCTTGGCCCT +
Preference number: 3 (lower is better)
Translates to: HAITPFIAVLSGEDTVQMILPLE*SHRLGP
Trigger: AGGGCCAAGCCTGTGACTCAACTCCAGGGGCAAGAT...CATTTGCACGGTGTCTTCCCCGGACAGCACAGCAATAAATGGTGTGATTGCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR GCA 72 bp GCCACGGTGTCCACGCAATCACACCATTTATTGCTGTaGTGTCCGGGGAAGACACCGTGCAAATGCCAAAGT +
Preference number: 3 (lower is better)
Translates to: ATVSTQSHHLLL*CPGKTPCKCQS
Trigger: ACTTTGGCATTTGCACGGTGTCTTCCCCGGACAGCACAGCAATAAATGGTGTGATTGCGTGGACACCGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR GCA 72 bp TGCTGCTGCTCTTCATACACCAGGATATCCAGCATCTaGTTCAGCCGCCAGGGAATGTCTGTCTTCTTGGCG +
Preference number: 3 (lower is better)
Translates to: CCCSSYTRISSI*FSRQGMSVFLA
Trigger: CGCCAAGAAGACAGACATTCCCTGGCGGCTGAAGCAGATGCTGGATATCCTGGTGTATGAAGAGCAGCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427751.5
3UTR CCA 72 bp AATCTTTTTACCTTCCAGGATGTAGGCGAGCAGCTCTaGGTCCTGCTGGATCTTGGAGCAGAGGACGGTGGT +
Preference number: 3 (lower is better)
Translates to: NLFTFQDVGEQL*VLLDLGAEDGG
Trigger: ACCACCGTCCTCTGCTCCAAGATCCAGCAGGACCCAGAGCTGCTCGCCTACATCCTGGAAGGTAAAAAGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427751.5
3UTR CCA 72 bp CCCTGCTGCAGCGCTAGAAAAAGAATTTGTCTTCCTTaGGGAGGAAGATGGGCCCGAATTAGCAGTGGAGTC +
Preference number: 3 (lower is better)
Translates to: PCCSARKRICLP*GGRWARISSGV
Trigger: GACTCCACTGCTAATTCGGGCCCATCTTCCTCCCCAAGGAAGACAAATTCTTTTTCTAGCGCTGCAGCAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR-3UTR CAA 90 bp GGGCAGTGGGTTCTCCGCATGCTTTCTTCCTACCTACAATCTTTTTACCTTCCAAGAGTCTCCAGGATCTaGTGCTGCAGCAGGTACTCC +
Preference number: 3 (lower is better)
Translates to: GQWVLRMLSSYLQSFYLPRVSRI*CCSRYS
Trigger: GGAGTACCTGCTGCAGCACAAGATCCTGGAGACTCT...TGGAAGGTAAAAAGATTGTAGGTAGGAAGAAAGCATGCGGAGAACCCACTGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427751.5
3UTR GCA 72 bp GGTTGTGTCCTTAGGCAGGGCAGTGGGTTCTCCGCATaGTTTCTTCCTACCTACAATCTTTTTACCTTCCAG +
Preference number: 3 (lower is better)
Translates to: GCVLRQGSGFSA*FLPTYNLFTFQ
Trigger: CTGGAAGGTAAAAAGATTGTAGGTAGGAAGAAAGCATGCGGAGAACCCACTGCCCTGCCTAAGGACACAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427751.5
3UTR TCA 72 bp AACAGGCATACAACACGCAGCATAAACACACCCAAATaGGACTTGCACACAGATGCTCCCACGTGGTCCATT +
Preference number: 3 (lower is better)
Translates to: NRHTTRSINTPK*DLHTDAPTWSI
Trigger: AATGGACCACGTGGGAGCATCTGTGTGCAAGTCTCATTTGGGTGTGTTTATGCTGCGTGTTGTATGCCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR TCA 72 bp AAATGCCAAAGTGCACTGAGGAGAGGGGAGGGTCTGTaGCTCCCAAACCCTCGAATATTTTATGAATCTAAG +
Preference number: 3 (lower is better)
Translates to: KCQSALRRGEGL*LPNPRIFYESK
Trigger: CTTAGATTCATAAAATATTCGAGGGTTTGGGAGTCACAGACCCTCCCCTCTCCTCAGTGCACTTTGGCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
3UTR TCA 72 bp CTTAAAGACAAGGTTTTAAATATCAGGCCTACTTTATaGCTAAAACAGGCATACAACACGCAGCATAAACAC +
Preference number: 3 (lower is better)
Translates to: LKDKVLNIRPTL*LKQAYNTQHKH
Trigger: GTGTTTATGCTGCGTGTTGTATGCCTGTTTTAGTCATAAAGTAGGCCTGATATTTAAAACCTTGTCTTTAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR CCA 90 bp CACGGTGCTCTTCAGAGCGGCGAGGTCCTCCCCCGCGGGGAGGAATGTGGGAGAGCAGCAGGTCAATGCTaGGCTCGCGCGCCCCCACGG +
Preference number: 4 (lower is better)
Translates to: HGALQSGEVLPRGEECGRAAGQC*ARAPPR
Trigger: CCGTGGGGGCGCGCGAGCCCAGCATTGACCTGCTGC...TCTCCCACATTCCTCCCCGCGGGGGAGGACCTCGCCGCTCTGAAGAGCACCGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CCA 90 bp TGGGCCGCAGCCACTTCCCGCCAGGCTCAGGGGCCTGGAGTCAGGGGGCGTCCTGGAAGGCAGAGGTCTTaGCTTCCTCGGGGACCAGGC +
Preference number: 4 (lower is better)
Translates to: WAAATSRQAQGPGVRGRPGRQRS*LPRGPG
Trigger: GCCTGGTCCCCGAGGAAGCCAAGACCTCTGCCTTCC...AGGACGCCCCCTGACTCCAGGCCCCTGAGCCTGGCGGGAAGTGGCTGCGGCCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR CCA 90 bp TGGGCCGCAGCCACTTCCCGCCAGGCTCAGGGGCCTGGAGTCAGGGGGCGTCCTCCCATCTCACTGGCCTaGGCTCCTGACCAGTCTCGG +
Preference number: 4 (lower is better)
Translates to: WAAATSRQAQGPGVRGRPPISLA*APDQSR
Trigger: CCGAGACTGGTCAGGAGCCCAGGCCAGTGAGATGGG...AGGACGCCCCCTGACTCCAGGCCCCTGAGCCTGGCGGGAAGTGGCTGCGGCCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR CCA 90 bp CATGCCGCAGTCTCCTTGAGTGAGCCCGGGAGCAGAAGCCCCATCCCAGGAGGGGCAGCAGGTCAATGCTaGGCTCGCGCGCCCCCACGG +
Preference number: 4 (lower is better)
Translates to: HAAVSLSEPGSRSPIPGGAAGQC*ARAPPR
Trigger: CCGTGGGGGCGCGCGAGCCCAGCATTGACCTGCTGC...CCCTCCTGGGATGGGGCTTCTGCTCCCGGGCTCACTCAAGGAGACTGCGGCATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CCA 90 bp GCGCCGCCCGTGTATTCCTGCAGGTCAAGACAGATTCGGGCCGGGTGGGGTGGCCTGCTGCCGCATGCCTaGGGGGTACTCGGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: APPVYSCRSRQIRAGWGGLLPHA*GVLGLA
Trigger: GGCAAGGCCGAGTACCCCCCAGGCATGCGGCAGCAG...GCCACCCCACCCGGCCCGAATCTGTCTTGACCTGCAGGAATACACGGGCGGCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR GCA 90 bp CTCTTCAGAGCGGCGAGGTCCTCCCCCGCGGGGAGGAATGTGGGAGAGGCAGAGCTCTGCTCGGACACGTaGAGGAGCTGGGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LFRAARSSPAGRNVGEAELCSDT*RSWGCR
Trigger: CCTGCAGCCCCAGCTCCTGCACGTGTCCGAGCAGAG...CTCTGCCTCTCCCACATTCCTCCCCGCGGGGGAGGACCTCGCCGCTCTGAAGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp TCCCGCCAGGCTCAGGGGCCTGGAGTCAGGGGGCGTCCTTCCCTTATCTGTCCCACCACCAGGACTGGCTaGCTGGGCCGCAGCCACTTC +
Preference number: 4 (lower is better)
Translates to: SRQAQGPGVRGRPSLICPTTRTG*LGRSHF
Trigger: GAAGTGGCTGCGGCCCAGGCAGCCAGTCCTGGTGGT...GGGACAGATAAGGGAAGGACGCCCCCTGACTCCAGGCCCCTGAGCCTGGCGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR CCA 90 bp TTGTGCACCCACATGTGCACGGTGCTCTTCAGAGCGGCGAGGTCCTCCCCCGCGCTGCTGCCGCATGCCTaGGGGGTACTCGGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: LCTHMCTVLFRAARSSPALLPHA*GVLGLA
Trigger: GGCAAGGCCGAGTACCCCCCAGGCATGCGGCAGCAG...CGCGGGGGAGGACCTCGCCGCTCTGAAGAGCACCGTGCACATGTGGGTGCACAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CCA 90 bp CACGGTGCTCTTCAGAGCGGCGAGGTCCTCCCCCGCGGGGAGGAATGTGGGAGAAGCACCACCACGCCCTaGAGGAGGGTCTGGTGGTCC +
Preference number: 4 (lower is better)
Translates to: HGALQSGEVLPRGEECGRSTTTP*RRVWWS
Trigger: GGACCACCAGACCCTCCTCCAGGGCGTGGTGGTGCT...TCTCCCACATTCCTCCCCGCGGGGGAGGACCTCGCCGCTCTGAAGAGCACCGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR TCA 90 bp TTGTGCACCCACATGTGCACGGTGCTCTTCAGAGCGGCGAGGTCCTCCCCCGCGAGCCGGGGGCCAGGCTaGTGTACGGATCCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: LCTHMCTVLFRAARSSPASRGPG*CTDPAG
Trigger: ACCTGCTGGATCCGTACATCAGCCTGGCCCCCGGCT...CGCGGGGGAGGACCTCGCCGCTCTGAAGAGCACCGTGCACATGTGGGTGCACAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp CACTTCCCGCCAGGCTCAGGGGCCTGGAGTCAGGGGGCGTCCTTCCCTTATCTGCCCGCGGCCGCCTGCTaGTGCTCTTCATACACCAGG +
Preference number: 4 (lower is better)
Translates to: HFPPGSGAWSQGASFPYLPAAAC*CSSYTR
Trigger: CCTGGTGTATGAAGAGCAGCAGCAGGCGGCCGCGGG...CAGATAAGGGAAGGACGCCCCCTGACTCCAGGCCCCTGAGCCTGGCGGGAAGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR GCA 90 bp CACGGTGCTCTTCAGAGCGGCGAGGTCCTCCCCCGCGGGGAGGAATGTGGGAGACGCTCCCCTCCTGGCTaGAGCTGCACCAAGGTTCTC +
Preference number: 4 (lower is better)
Translates to: HGALQSGEVLPRGEECGRRSPPG*SCTKVL
Trigger: GAGAACCTTGGTGCAGCTGCAGCCAGGAGGGGAGCG...TCTCCCACATTCCTCCCCGCGGGGGAGGACCTCGCCGCTCTGAAGAGCACCGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR GCA 90 bp GGAGAACACCACCAGGACTGGCTGCCTGGGCCGCAGCCACTTCCCGCCAGGCTCCCCACATGTGCACGGTaGTCTTCAGAGCGGCGAGGT +
Preference number: 4 (lower is better)
Translates to: GEHHQDWLPGPQPLPARLPTCAR*SSERRG
Trigger: ACCTCGCCGCTCTGAAGAGCACCGTGCACATGTGGG...GAGCCTGGCGGGAAGTGGCTGCGGCCCAGGCAGCCAGTCCTGGTGGTGTTCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR GCA 90 bp TGGGCCGCAGCCACTTCCCGCCAGGCTCAGGGGCCTGGAGTCAGGGGGCGTCCTTTGTGCACCCACATGTaGACGGTGCTCTTCAGAGCG +
Preference number: 4 (lower is better)
Translates to: WAAATSRQAQGPGVRGRPLCTHM*TVLFRA
Trigger: CGCTCTGAAGAGCACCGTGCACATGTGGGTGCACAA...AGGACGCCCCCTGACTCCAGGCCCCTGAGCCTGGCGGGAAGTGGCTGCGGCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR CCA 90 bp CCACCGTCCAGCTCCTCGGTCTCAGCAGGCATGTGGCTGTTCAAGGCCTGGGCCGCCTTCGTGGGGACTTaGACCGGCAGGGCCTGCACT +
Preference number: 4 (lower is better)
Translates to: PPSSSSVSAGMWLFKAWAAFVGT*TGRACT
Trigger: AGTGCAGGCCCTGCCGGTCCAAGTCCCCACGAAGGC...GGCCCAGGCCTTGAACAGCCACATGCCTGCTGAGACCGAGGAGCTGGACGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427751.5
CDS-3UTR GCA 90 bp AGTCCAGACGCAGTTCATCCACGGAGATCTGCGCCCCGTCCACACCAACACCCACCGGGGGCTTCAGGCTaGCGGTCTGTGCCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: SPDAVHPRRSAPRPHQHPPGASG*RSVPRR
Trigger: CCTCCTGGGCACAGACCGGCAGCCTGAAGCCCCCGG...TGGGTGTTGGTGTGGACGGGGCGCAGATCTCCGTGGATGAACTGCGTCTGGACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp CACTTCCCGCCAGGCTCAGGGGCCTGGAGTCAGGGGGCGTCCTTCCCTTATCTGGCACCAGGAGCAGCTTaGCTGGGAACTGGGGTACCC +
Preference number: 4 (lower is better)
Translates to: HFPPGSGAWSQGASFPYLAPGAA*LGTGVP
Trigger: GGGTACCCCAGTTCCCAGGCAAGCTGCTCCTGGTGC...CAGATAAGGGAAGGACGCCCCCTGACTCCAGGCCCCTGAGCCTGGCGGGAAGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR GCA 90 bp CGGTGCTCTTCAGAGCGGCGAGGTCCTCCCCCGCGGGGAGGAATGTGGGAGAGGCCTTGGCACCTGGCATaGCCATTCCCTGAAACCCAG +
Preference number: 4 (lower is better)
Translates to: RCSSERRGPPPRGGMWERPWHLA*PFPETQ
Trigger: CTGGGTTTCAGGGAATGGGCATGCCAGGTGCCAAGG...CCTCTCCCACATTCCTCCCCGCGGGGGAGGACCTCGCCGCTCTGAAGAGCACCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp CTGGCACAGCCCAAGCAGGGAGGTAATCAGGTTGCTCTCTGTGGTCCCACCGTCTGGACCGGCAGGGCCTaGACTTCCCACGTCCCGGGG +
Preference number: 4 (lower is better)
Translates to: LAQPKQGGNQVALCGPTVWTGRA*TSHVPG
Trigger: CCCCGGGACGTGGGAAGTGCAGGCCCTGCCGGTCCA...GACGGTGGGACCACAGAGAGCAACCTGATTACCTCCCTGCTTGGGCTGTGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427751.5
CDS-3UTR CCA 90 bp CACGGTGCTCTTCAGAGCGGCGAGGTCCTCCCCCGCGGGGAGGAATGTGGGAGAAGCAGCAGGTTCTCCTaGGCCTTCAAGGCCACCCGA +
Preference number: 4 (lower is better)
Translates to: HGALQSGEVLPRGEECGRSSRFS*AFKATR
Trigger: TCGGGTGGCCTTGAAGGCCCAGGAGAACCTGCTGCT...TCTCCCACATTCCTCCCCGCGGGGGAGGACCTCGCCGCTCTGAAGAGCACCGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CCA 90 bp CGGTGCTCTTCAGAGCGGCGAGGTCCTCCCCCGCGGGGAGGAATGTGGGAGAGGAGCACTCGGAGGAAGTaGCCCTCGAAGAAAGGTCGC +
Preference number: 4 (lower is better)
Translates to: RCSSERRGPPPRGGMWERSTRRK*PSKKGR
Trigger: GCGACCTTTCTTCGAGGGCCACTTCCTCCGAGTGCT...CCTCTCCCACATTCCTCCCCGCGGGGGAGGACCTCGCCGCTCTGAAGAGCACCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
3UTR CAA 72 bp TGGGGCCTGGCAGGAGCACCATCGTGGGAGCAGTCCTaGTCCCCGTGGCTGGTTGTGTCCTTAGGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: WGLAGAPSWEQS*SPWLVVSLGRA
Trigger: TGCCCTGCCTAAGGACACAACCAGCCACGGGGACAAGGACTGCTCCCACGATGGTGCTCCTGCCAGGCCCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427751.5
CDS-3UTR TCA 90 bp GTGCACCCACATGTGCACGGTGCTCTTCAGAGCGGCGAGGTCCTCCCCCGCGGGGGCTTTGCGGGAGTTTaGAAGCCGGAATCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: VHPHVHGALQSGEVLPRGGFAGV*KPESRK
Trigger: CTTCCTGGATTCCGGCTTTCAAACTCCCGCAAAGCC...CCCGCGGGGGAGGACCTCGCCGCTCTGAAGAGCACCGTGCACATGTGGGTGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR TCA 90 bp CATGCCGCAGTCTCCTTGAGTGAGCCCGGGAGCAGAAGCCCCATCCCAGGAGGGATGCCGCAGTCTCCTTaGGTGAGCCCGGGAGCAGAA +
Preference number: 4 (lower is better)
Translates to: HAAVSLSEPGSRSPIPGGMPQSP*VSPGAE
Trigger: TTCTGCTCCCGGGCTCACTCAAGGAGACTGCGGCAT...CCCTCCTGGGATGGGGCTTCTGCTCCCGGGCTCACTCAAGGAGACTGCGGCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp CAGGTCAAGACAGATTCGGGCCGGGTGGGGTGGCAGCCCAGCCACGGAGGGCATGAGGTCAAGATGCTCTaGTCGGACACGTGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: QVKTDSGRVGWQPSHGGHEVKML*SDTCRS
Trigger: GCTCCTGCACGTGTCCGAGCAGAGCATCTTGACCTC...ATGCCCTCCGTGGCTGGGCTGCCACCCCACCCGGCCCGAATCTGTCTTGACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR GCA 90 bp CAGGTCAAGACAGATTCGGGCCGGGTGGGGTGGCAGCCCAGCCACGGAGGGCATCGGTGGAGGTCAAGATaGTCTGCTCGGACACGTGCA +
Preference number: 4 (lower is better)
Translates to: QVKTDSGRVGWQPSHGGHRWRSR*SARTRA
Trigger: TGCACGTGTCCGAGCAGAGCATCTTGACCTCCACCG...ATGCCCTCCGTGGCTGGGCTGCCACCCCACCCGGCCCGAATCTGTCTTGACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR GCA 90 bp CACTTCCCGCCAGGCTCAGGGGCCTGGAGTCAGGGGGCGTCCTTCCCTTATCTGCCCTCGTGGGGCTTCTaGAGCAGCTCCTCAAACAGC +
Preference number: 4 (lower is better)
Translates to: HFPPGSGAWSQGASFPYLPSWGF*SSSSNS
Trigger: GCTGTTTGAGGAGCTGCTGCAGAAGCCCCACGAGGG...CAGATAAGGGAAGGACGCCCCCTGACTCCAGGCCCCTGAGCCTGGCGGGAAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR GCA 90 bp CACGGTGCTCTTCAGAGCGGCGAGGTCCTCCCCCGCGGGGAGGAATGTGGGAGAAGGCCCCAAGGACCTTaGTGCCTGGAAAGCCATCTG +
Preference number: 4 (lower is better)
Translates to: HGALQSGEVLPRGEECGRRPQGP*CLESHL
Trigger: CAGATGGCTTTCCAGGCAGCAAGGTCCTTGGGGCCT...TCTCCCACATTCCTCCCCGCGGGGGAGGACCTCGCCGCTCTGAAGAGCACCGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CCA 90 bp GAGTCTGGCTCCTGGCAGGCGCTGAGGATCAGCAGATCTGCACTGCCAGAGCCTTGCTCCCCAGGAGCCTaGCCCGTCAACTGCTTGCGC +
Preference number: 4 (lower is better)
Translates to: ESGSWQALRISRSALPEPCSPGA*PVNCLR
Trigger: GCGCAAGCAGTTGACGGGCCAGGCTCCTGGGGAGCA...AGGCTCTGGCAGTGCAGATCTGCTGATCCTCAGCGCCTGCCAGGAGCCAGACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR CCA 90 bp TCCACGGAGATCTGCGCCCCGTCCACACCAACACCCACGTTTGTGCACCCACATCCACCGCCCTGGTGCTaGCTCAGACCTGCCCTTCCG +
Preference number: 4 (lower is better)
Translates to: STEICAPSTPTPTFVHPHPPPWC*LRPALP
Trigger: CGGAAGGGCAGGTCTGAGCCAGCACCAGGGCGGTGG...ATGTGGGTGCACAAACGTGGGTGTTGGTGTGGACGGGGCGCAGATCTCCGTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CCA 90 bp GGAGAACACCACCAGGACTGGCTGCCTGGGCCGCAGCCACTTCCCGCCAGGCTCGTCCTGGGCAGAAGGTaGGGAAACTTGGCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: GEHHQDWLPGPQPLPARLVLGRR*GNLAKN
Trigger: GTTCTTGGCCAAGTTTCCCCACCTTCTGCCCAGGAC...GAGCCTGGCGGGAAGTGGCTGCGGCCCAGGCAGCCAGTCCTGGTGGTGTTCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR CCA 90 bp TTGTGCACCCACATGTGCACGGTGCTCTTCAGAGCGGCGAGGTCCTCCCCCGCGCAAGAGTCTGGCTCCTaGCAGGCGCTGAGGATCAGC +
Preference number: 4 (lower is better)
Translates to: LCTHMCTVLFRAARSSPAQESGS*QALRIS
Trigger: GCTGATCCTCAGCGCCTGCCAGGAGCCAGACTCTTG...CGCGGGGGAGGACCTCGCCGCTCTGAAGAGCACCGTGCACATGTGGGTGCACAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR TCA 90 bp CGGTGCTCTTCAGAGCGGCGAGGTCCTCCCCCGCGGGGAGGAATGTGGGAGAGGGGTCACAATGCCCGATaGGATGAGCATACAGGGTGT +
Preference number: 4 (lower is better)
Translates to: RCSSERRGPPPRGGMWERGHNAR*DEHTGC
Trigger: ACACCCTGTATGCTCATCTCATCGGGCATTGTGACC...CCTCTCCCACATTCCTCCCCGCGGGGGAGGACCTCGCCGCTCTGAAGAGCACCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR TCA 90 bp GCGCCGCCCGTGTATTCCTGCAGGTCAAGACAGATTCGGGCCGGGTGGGGTGGCTCCAGCAGGTACTCATaGATATGGGGGTGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: APPVYSCRSRQIRAGWGGSSRYS*IWGWGK
Trigger: CTTCCCCCACCCCCATATTCATGAGTACCTGCTGGA...GCCACCCCACCCGGCCCGAATCTGTCTTGACCTGCAGGAATACACGGGCGGCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR TCA 90 bp GTGCACCCACATGTGCACGGTGCTCTTCAGAGCGGCGAGGTCCTCCCCCGCGGGAGAGGCAGAGGTCACTaGGTTTCCTCCTGTTTCGTG +
Preference number: 4 (lower is better)
Translates to: VHPHVHGALQSGEVLPRGRGRGH*VSSCFV
Trigger: CACGAAACAGGAGGAAACTCAGTGACCTCTGCCTCT...CCCGCGGGGGAGGACCTCGCCGCTCTGAAGAGCACCGTGCACATGTGGGTGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR TCA 90 bp GAGTCTGGCTCCTGGCAGGCGCTGAGGATCAGCAGATCTGCACTGCCAGAGCCTGCTCCTGGCAGGCGCTaGGGATCAGCAGATCTGCAC +
Preference number: 4 (lower is better)
Translates to: ESGSWQALRISRSALPEPAPGRR*GSADLH
Trigger: GTGCAGATCTGCTGATCCTCAGCGCCTGCCAGGAGC...AGGCTCTGGCAGTGCAGATCTGCTGATCCTCAGCGCCTGCCAGGAGCCAGACTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR GCA 90 bp TCCAGACGCAGTTCATCCACGGAGATCTGCGCCCCGTCCACACCAACACCCACGGGGGGTACTCGGCCTTaGCCAGCGTGCAGAGAGTCT +
Preference number: 4 (lower is better)
Translates to: SRRSSSTEICAPSTPTPTGGTRP*PACRES
Trigger: AGACTCTCTGCACGCTGGGCAAGGCCGAGTACCCCC...CGTGGGTGTTGGTGTGGACGGGGCGCAGATCTCCGTGGATGAACTGCGTCTGGA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp CACTTCCCGCCAGGCTCAGGGGCCTGGAGTCAGGGGGCGTCCTTCCCTTATCTGAGCAGCTCTGGGTCCTaGTGGATCTTGGAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: HFPPGSGAWSQGASFPYLSSSGS*WILEQR
Trigger: CCTCTGCTCCAAGATCCAGCAGGACCCAGAGCTGCT...CAGATAAGGGAAGGACGCCCCCTGACTCCAGGCCCCTGAGCCTGGCGGGAAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR GCA 90 bp TTGTGCACCCACATGTGCACGGTGCTCTTCAGAGCGGCGAGGTCCTCCCCCGCGCGGTGGAGGTCAAGATaGTCTGCTCGGACACGTGCA +
Preference number: 4 (lower is better)
Translates to: LCTHMCTVLFRAARSSPARWRSR*SARTRA
Trigger: TGCACGTGTCCGAGCAGAGCATCTTGACCTCCACCG...CGCGGGGGAGGACCTCGCCGCTCTGAAGAGCACCGTGCACATGTGGGTGCACAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp AGTCCAGACGCAGTTCATCCACGGAGATCTGCGCCCCGTCCACACCAACACCCAGCCTGGCCCGTCAACTaGTTGCGCACCAGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: SPDAVHPRRSAPRPHQHPAWPVN*LRTRSS
Trigger: GCTGCTCCTGGTGCGCAAGCAGTTGACGGGCCAGGC...TGGGTGTTGGTGTGGACGGGGCGCAGATCTCCGTGGATGAACTGCGTCTGGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp GCTGTGCTGTCCGGGGAAGACACCGTGCAAATGCCAAAGTGCACTGAGGAGAGGGTGCTGGCTCAGACCTaGCCTTCCGGGGCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: AVLSGEDTVQMPKCTEERVLAQT*PSGAGE
Trigger: CTCCCCAGCCCCGGAAGGGCAGGTCTGAGCCAGCAC...CCTCTCCTCAGTGCACTTTGGCATTTGCACGGTGTCTTCCCCGGACAGCACAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CCA 90 bp GTCTCCTTGAGTGAGCCCGGGAGCAGAAGCCCCATCCCAGGAGGGGAGTGTGGCGTAGGCGAGCAGCTCTaGGTCCTGCTGGATCTTGGA +
Preference number: 4 (lower is better)
Translates to: VSLSEPGSRSPIPGGECGVGEQL*VLLDLG
Trigger: TCCAAGATCCAGCAGGACCCAGAGCTGCTCGCCTAC...GCCACACTCCCCTCCTGGGATGGGGCTTCTGCTCCCGGGCTCACTCAAGGAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CCA 90 bp CACGTTTGTGCACCCACATGTGCACGGTGCTCTTCAGAGCGGCGAGGTCCTCCCGCAGGAGCACCATCGTaGGAGCAGTCCTTGTCCCCG +
Preference number: 4 (lower is better)
Translates to: HVCAPTCARCSSERRGPPAGAPS*EQSLSP
Trigger: CGGGGACAAGGACTGCTCCCACGATGGTGCTCCTGC...GGGAGGACCTCGCCGCTCTGAAGAGCACCGTGCACATGTGGGTGCACAAACGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CCA 90 bp TGTCACCTCTTGGCAACCTGTGCCTGGCTTCTGGCTGTCACCCAAGCTCCTCCAGACTCCCCGTCCAGCTaGGGCCTGGCAGGAGCACCA +
Preference number: 4 (lower is better)
Translates to: CHLLATCAWLLAVTQAPPDSPSS*GLAGAP
Trigger: TGGTGCTCCTGCCAGGCCCCAGCTGGACGGGGAGTC...TGGAGGAGCTTGGGTGACAGCCAGAAGCCAGGCACAGGTTGCCAAGAGGTGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450006.7
CDS-3UTR CCA 90 bp CAGTTCATCCACGGAGATCTGCGCCCCGTCCACACCAACACCCACGTTTGTGCAGGCCCGCTCCCCTCCTaGCTGCAGCTGCACCAAGGT +
Preference number: 4 (lower is better)
Translates to: QFIHGDLRPVHTNTHVCAGPLPS*LQLHQG
Trigger: ACCTTGGTGCAGCTGCAGCCAGGAGGGGAGCGGGCC...TGCACAAACGTGGGTGTTGGTGTGGACGGGGCGCAGATCTCCGTGGATGAACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR CCA 90 bp TCCTTGTCCCCGTGGCTGGTTGTGTCCTTAGGCAGGGCAGTGGGTTCTCCGCATGCAGCAGGTCAATGCTaGGCTCGCGCCTTCGTGGGG +
Preference number: 4 (lower is better)
Translates to: SLSPWLVVSLGRAVGSPHAAGQC*ARAFVG
Trigger: CCCCACGAAGGCGCGAGCCCAGCATTGACCTGCTGC...ATGCGGAGAACCCACTGCCCTGCCTAAGGACACAACCAGCCACGGGGACAAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427751.5
CDS-3UTR TCA 90 bp GTCTCCTTGAGTGAGCCCGGGAGCAGAAGCCCCATCCCAGGAGGGGAGTGTGGCAGCAGAGGACGGTGGTaGACTGCACCTCCTCCTTTT +
Preference number: 4 (lower is better)
Translates to: VSLSEPGSRSPIPGGECGSRGRW*TAPPPF
Trigger: AAAAGGAGGAGGTGCAGTTCACCACCGTCCTCTGCT...GCCACACTCCCCTCCTGGGATGGGGCTTCTGCTCCCGGGCTCACTCAAGGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR TCA 90 bp GCTGTGCTGTCCGGGGAAGACACCGTGCAAATGCCAAAGTGCACTGAGGAGAGGGCTCTCAGGCTCTGGTaGGCCCCAGGCCACGTAAGG +
Preference number: 4 (lower is better)
Translates to: AVLSGEDTVQMPKCTEERALRLW*APGHVR
Trigger: CCTTACGTGGCCTGGGGCTCACCAGAGCCTGAGAGC...CCTCTCCTCAGTGCACTTTGGCATTTGCACGGTGTCTTCCCCGGACAGCACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp GGCAGAAGGTGGGGAAACTTGGCCAAGAACAGAGCCACGGTGTCCACGCAATCACCTGCAGCAGGTCAATaGTGGGCTCGCGCGCCCCCA +
Preference number: 4 (lower is better)
Translates to: GRRWGNLAKNRATVSTQSPAAGQ*WARAPP
Trigger: TGGGGGCGCGCGAGCCCAGCATTGACCTGCTGCAGG...TGATTGCGTGGACACCGTGGCTCTGTTCTTGGCCAAGTTTCCCCACCTTCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR GCA 90 bp CTCCTGTTTCGTGTCACCTCTTGGCAACCTGTGCCTGGCTTCTGGCTGTCACCCCCCGCGGCCGCCTGCTaGTGCTCTTCATACACCAGG +
Preference number: 4 (lower is better)
Translates to: LLFRVTSWQPVPGFWLSPPAAAC*CSSYTR
Trigger: CCTGGTGTATGAAGAGCAGCAGCAGGCGGCCGCGGG...GGGTGACAGCCAGAAGCCAGGCACAGGTTGCCAAGAGGTGACACGAAACAGGAG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000450006.7
CDS-3UTR GCA 90 bp GACACCGTGCAAATGCCAAAGTGCACTGAGGAGAGGGGAGGGTCTGTGACTCCCCTCTGCTCGGACACGTaGAGGAGCTGGGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: DTVQMPKCTEERGGSVTPLCSDT*RSWGCR
Trigger: CCTGCAGCCCCAGCTCCTGCACGTGTCCGAGCAGAG...GGGAGTCACAGACCCTCCCCTCTCCTCAGTGCACTTTGGCATTTGCACGGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp CCAAGCTCCTCCAAGAAGGCCCCAAGGACCTTGCTGCCTGGAAAGCCATCTGTTGTCTGGTGGTCCAGCTaGTCCCCAGGAGCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: PSSSKKAPRTLLPGKPSVVWWSS*SPGAWP
Trigger: GGGCCAGGCTCCTGGGGAGCAGCTGGACCACCAGAC...AACAGATGGCTTTCCAGGCAGCAAGGTCCTTGGGGCCTTCTTGGAGGAGCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp TTGTGCACCCACATGTGCACGGTGCTCTTCAGAGCGGCGAGGTCCTCCCCCGCGCCTCCTGGCTGCAGCTaGACCAAGGTTCTCATTAGC +
Preference number: 4 (lower is better)
Translates to: LCTHMCTVLFRAARSSPAPPGCS*TKVLIS
Trigger: GCTAATGAGAACCTTGGTGCAGCTGCAGCCAGGAGG...CGCGGGGGAGGACCTCGCCGCTCTGAAGAGCACCGTGCACATGTGGGTGCACAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR GCA 90 bp GTGCACCCACATGTGCACGGTGCTCTTCAGAGCGGCGAGGTCCTCCCCCGCGGGACCCCACCTCCCTGCTaGAGCGCTAGAAAAAGAATT +
Preference number: 4 (lower is better)
Translates to: VHPHVHGALQSGEVLPRGTPPPC*SARKRI
Trigger: AATTCTTTTTCTAGCGCTGCAGCAGGGAGGTGGGGT...CCCGCGGGGGAGGACCTCGCCGCTCTGAAGAGCACCGTGCACATGTGGGTGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR GCA 90 bp CATGCCGCAGTCTCCTTGAGTGAGCCCGGGAGCAGAAGCCCCATCCCAGGAGGGGAGGATCAGCAGATCTaGACTGCCAGAGCCTGTCTG +
Preference number: 4 (lower is better)
Translates to: HAAVSLSEPGSRSPIPGGEDQQI*TARACL
Trigger: CAGACAGGCTCTGGCAGTGCAGATCTGCTGATCCTC...CCCTCCTGGGATGGGGCTTCTGCTCCCGGGCTCACTCAAGGAGACTGCGGCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR CCA 90 bp CAGACGCAGTTCATCCACGGAGATCTGCGCCCCGTCCACACCAACACCCACGTTGCAGGAGCACCATCGTaGGAGCAGTCCTTGTCCCCG +
Preference number: 4 (lower is better)
Translates to: QTQFIHGDLRPVHTNTHVAGAPS*EQSLSP
Trigger: CGGGGACAAGGACTGCTCCCACGATGGTGCTCCTGC...AACGTGGGTGTTGGTGTGGACGGGGCGCAGATCTCCGTGGATGAACTGCGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CCA 90 bp TTGTGCACCCACATGTGCACGGTGCTCTTCAGAGCGGCGAGGTCCTCCCCCGCGATGGACCGGTACAACTaGCAAAGGTGCCGGACGATC +
Preference number: 4 (lower is better)
Translates to: LCTHMCTVLFRAARSSPAMDRYN*QRCRTI
Trigger: GATCGTCCGGCACCTTTGCCAGTTGTACCGGTCCAT...CGCGGGGGAGGACCTCGCCGCTCTGAAGAGCACCGTGCACATGTGGGTGCACAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CCA 90 bp TCCGGGGAAGACACCGTGCAAATGCCAAAGTGCACTGAGGAGAGGGGAGGGTCTGCAGGGGAGCGAAGCTaGCGCAGCATGGCTGTGAGG +
Preference number: 4 (lower is better)
Translates to: SGEDTVQMPKCTEERGGSAGERS*RSMAVR
Trigger: CCTCACAGCCATGCTGCGCCAGCTTCGCTCCCCTGC...AGACCCTCCCCTCTCCTCAGTGCACTTTGGCATTTGCACGGTGTCTTCCCCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CCA 90 bp CACGTTTGTGCACCCACATGTGCACGGTGCTCTTCAGAGCGGCGAGGTCCTCCCTGGATGATCCCCTCGTaGGGCTTCTGCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: HVCAPTCARCSSERRGPPWMIPS*GFCSSS
Trigger: GGAGCTGCTGCAGAAGCCCCACGAGGGGATCATCCA...GGGAGGACCTCGCCGCTCTGAAGAGCACCGTGCACATGTGGGTGCACAAACGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CCA 90 bp TCTGGCTGTCACCCAAGCTCCTCCAAGAAGGCCCCAAGGACCTTGCTGCCTGGAGGAAGGCAGAGGTCTTaGCTTCCTCGGGGACCAGGC +
Preference number: 4 (lower is better)
Translates to: SGCHPSSSKKAPRTLLPGGRQRS*LPRGPG
Trigger: GCCTGGTCCCCGAGGAAGCCAAGACCTCTGCCTTCC...TCCAGGCAGCAAGGTCCTTGGGGCCTTCTTGGAGGAGCTTGGGTGACAGCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450006.7
CDS-3UTR CCA 90 bp GTTTGGCTCCTTGGCACCTGGCATGCCCATTCCCTGAAACCCAGTCTGGTGTGGGGTCGCTCGGGCTCATaGGGGTCCAAAGGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: VWLLGTWHAHSLKPSLVWGRSGS*GSKGVG
Trigger: CCCCACACCTTTGGACCCCCATGAGCCCGAGCGACC...CCACACCAGACTGGGTTTCAGGGAATGGGCATGCCAGGTGCCAAGGAGCCAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CCA 90 bp GTCTCCTTGAGTGAGCCCGGGAGCAGAAGCCCCATCCCAGGAGGGGAGTGTGGCAGCTTGCCTGGGAACTaGGGTACCCTCTGGATTCTC +
Preference number: 4 (lower is better)
Translates to: VSLSEPGSRSPIPGGECGSLPGN*GTLWIL
Trigger: GAGAATCCAGAGGGTACCCCAGTTCCCAGGCAAGCT...GCCACACTCCCCTCCTGGGATGGGGCTTCTGCTCCCGGGCTCACTCAAGGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CCA 90 bp GATGCTCCCACGTGGTCCATTCCCTCATGGTGTCTCCGGGGTGGGCAGACTCTCCAGCACATGAGGGTCTaGGGTCTGGGTGCTCACCTG +
Preference number: 4 (lower is better)
Translates to: DAPTWSIPSWCLRGGQTLQHMRV*GLGAHL
Trigger: CAGGTGAGCACCCAGACCCCAGACCCTCATGTGCTG...GAGAGTCTGCCCACCCCGGAGACACCATGAGGGAATGGACCACGTGGGAGCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR CCA 90 bp GAAGACACCGTGCAAATGCCAAAGTGCACTGAGGAGAGGGGAGGGTCTGTGACTCCAGGACTGGCTGCCTaGGCCGCAGCCACTTCCCGC +
Preference number: 4 (lower is better)
Translates to: EDTVQMPKCTEERGGSVTPGLAA*AAATSR
Trigger: GCGGGAAGTGGCTGCGGCCCAGGCAGCCAGTCCTGG...AGTCACAGACCCTCCCCTCTCCTCAGTGCACTTTGGCATTTGCACGGTGTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR CCA 90 bp CACTTCCCGCCAGGCTCAGGGGCCTGGAGTCAGGGGGCGTCCTTCCCTTATCTGTTGGCAACCTGTGCCTaGCTTCTAGAAGCGGCATGG +
Preference number: 4 (lower is better)
Translates to: HFPPGSGAWSQGASFPYLLATCA*LLEAAW
Trigger: CCATGCCGCTTCTAGAAGCCAGGCACAGGTTGCCAA...CAGATAAGGGAAGGACGCCCCCTGACTCCAGGCCCCTGAGCCTGGCGGGAAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR CCA 90 bp TCCTTGTCCCCGTGGCTGGTTGTGTCCTTAGGCAGGGCAGTGGGTTCTCCGCATACCCCAACAAGGTCCTaGAGTTGTCGCCCCCACGGC +
Preference number: 4 (lower is better)
Translates to: SLSPWLVVSLGRAVGSPHTPTRS*SCRPHG
Trigger: GCCGTGGGGGCGACAACTCCAGGACCTTGTTGGGGT...ATGCGGAGAACCCACTGCCCTGCCTAAGGACACAACCAGCCACGGGGACAAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000427751.5
CDS-3UTR CCA 90 bp CACGTTTGTGCACCCACATGTGCACGGTGCTCTTCAGAGCGGCGAGGTCCTCCCCCTGTGCCTGGCTTCTaGCTGTCACCCAAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: HVCAPTCARCSSERRGPPPVPGF*LSPKLL
Trigger: GAGGAGCTTGGGTGACAGCCAGAAGCCAGGCACAGG...GGGAGGACCTCGCCGCTCTGAAGAGCACCGTGCACATGTGGGTGCACAAACGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450006.7
CDS-3UTR TCA 90 bp GTCTCCTTGAGTGAGCCCGGGAGCAGAAGCCCCATCCCAGGAGGGGAGTGTGGCCCATGGTACCTAATGTaGCACAGACAAGGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: VSLSEPGSRSPIPGGECGPWYLM*HRQGSR
Trigger: CCTGGAGCCTTGTCTGTGTCACATTAGGTACCATGG...GCCACACTCCCCTCCTGGGATGGGGCTTCTGCTCCCGGGCTCACTCAAGGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR TCA 90 bp GTGCTGTCCGGGGAAGACACCGTGCAAATGCCAAAGTGCACTGAGGAGAGGGGAGTGCTGTGGACCTGCTaGGACGGGTTCAGAAGGCGC +
Preference number: 4 (lower is better)
Translates to: VLSGEDTVQMPKCTEERGVLWTC*DGFRRR
Trigger: GCGCCTTCTGAACCCGTCTCAGCAGGTCCACAGCAC...TCCCCTCTCCTCAGTGCACTTTGGCATTTGCACGGTGTCTTCCCCGGACAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR TCA 90 bp GCTGTGCTGTCCGGGGAAGACACCGTGCAAATGCCAAAGTGCACTGAGGAGAGGCCCTTATCTGTCCCCTaGGCTCCCTGGCTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: AVLSGEDTVQMPKCTEERPLSVP*APWLPR
Trigger: TCTGGGGAGCCAGGGAGCTCAGGGGACAGATAAGGG...CCTCTCCTCAGTGCACTTTGGCATTTGCACGGTGTCTTCCCCGGACAGCACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR TCA 90 bp TCCGGGGAAGACACCGTGCAAATGCCAAAGTGCACTGAGGAGAGGGGAGGGTCTTGTGTAGTCCCGCTGTaGGGTAATGCCTGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: SGEDTVQMPKCTEERGGSCVVPL*GNAWRR
Trigger: GCGGCGCCAGGCATTACCTCACAGCGGGACTACACA...AGACCCTCCCCTCTCCTCAGTGCACTTTGGCATTTGCACGGTGTCTTCCCCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR GCA 90 bp AAGCTCCTCCAAGAAGGCCCCAAGGACCTTGCTGCCTGGAAAGCCATCTGTTTGCCTGCAGCAGGTCAATaGTGGGCTCGCGCGCCCCCA +
Preference number: 4 (lower is better)
Translates to: KLLQEGPKDLAAWKAICLPAAGQ*WARAPP
Trigger: TGGGGGCGCGCGAGCCCAGCATTGACCTGCTGCAGG...CAAACAGATGGCTTTCCAGGCAGCAAGGTCCTTGGGGCCTTCTTGGAGGAGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp AGTCCAGACGCAGTTCATCCACGGAGATCTGCGCCCCGTCCACACCAACACCCATGCTCCACGAAGGCCTaGAGCAGGTCAATGCTGGGC +
Preference number: 4 (lower is better)
Translates to: SPDAVHPRRSAPRPHQHPCSTKA*SRSMLG
Trigger: GCCCAGCATTGACCTGCTGCAGGCCTTCGTGGAGCA...TGGGTGTTGGTGTGGACGGGGCGCAGATCTCCGTGGATGAACTGCGTCTGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp GCGCCGCCCGTGTATTCCTGCAGGTCAAGACAGATTCGGGCCGGGTGGGGTGGCGGGTGCTTTCATCTGTaGTCTCGATGTAGTAGTGCG +
Preference number: 4 (lower is better)
Translates to: APPVYSCRSRQIRAGWGGGCFHL*SRCSSA
Trigger: CGCACTACTACATCGAGAGCACAGATGAAAGCACCC...GCCACCCCACCCGGCCCGAATCTGTCTTGACCTGCAGGAATACACGGGCGGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR GCA 90 bp CACGTTTGTGCACCCACATGTGCACGGTGCTCTTCAGAGCGGCGAGGTCCTCCCGCGGCCGCCTGCTGCTaGTCTTCATACACCAGGATA +
Preference number: 4 (lower is better)
Translates to: HVCAPTCARCSSERRGPPAAACC*SSYTRI
Trigger: TATCCTGGTGTATGAAGAGCAGCAGCAGGCGGCCGC...GGGAGGACCTCGCCGCTCTGAAGAGCACCGTGCACATGTGGGTGCACAAACGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp TCCGGGGAAGACACCGTGCAAATGCCAAAGTGCACTGAGGAGAGGGGAGGGTCTTCACCCGCGGCCGCCTaGTGCTGCTCTTCATACACC +
Preference number: 4 (lower is better)
Translates to: SGEDTVQMPKCTEERGGSSPAAA*CCSSYT
Trigger: GGTGTATGAAGAGCAGCAGCAGGCGGCCGCGGGTGA...AGACCCTCCCCTCTCCTCAGTGCACTTTGGCATTTGCACGGTGTCTTCCCCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp TGTCACCTCTTGGCAACCTGTGCCTGGCTTCTGGCTGTCACCCAAGCTCCTCCATCACCCGCGGCCGCCTaGTGCTGCTCTTCATACACC +
Preference number: 4 (lower is better)
Translates to: CHLLATCAWLLAVTQAPPSPAAA*CCSSYT
Trigger: GGTGTATGAAGAGCAGCAGCAGGCGGCCGCGGGTGA...TGGAGGAGCTTGGGTGACAGCCAGAAGCCAGGCACAGGTTGCCAAGAGGTGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450006.7
CDS-3UTR GCA 90 bp AGTCCAGACGCAGTTCATCCACGGAGATCTGCGCCCCGTCCACACCAACACCCACGGCCTTGCCCAGCGTaGAGAGAGTCTCCAGGATCT +
Preference number: 4 (lower is better)
Translates to: SPDAVHPRRSAPRPHQHPRPCPA*RESPGS
Trigger: AGATCCTGGAGACTCTCTGCACGCTGGGCAAGGCCG...TGGGTGTTGGTGTGGACGGGGCGCAGATCTCCGTGGATGAACTGCGTCTGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp AGACGCAGTTCATCCACGGAGATCTGCGCCCCGTCCACACCAACACCCACGTTTGGGGGTACTCGGCCTTaGCCAGCGTGCAGAGAGTCT +
Preference number: 4 (lower is better)
Translates to: RRSSSTEICAPSTPTPTFGGTRP*PACRES
Trigger: AGACTCTCTGCACGCTGGGCAAGGCCGAGTACCCCC...AAACGTGGGTGTTGGTGTGGACGGGGCGCAGATCTCCGTGGATGAACTGCGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp CTGGCACAGCCCAAGCAGGGAGGTAATCAGGTTGCTCTCTGTGGTCCCACCGTCAGGGGGTGCTGCACCTaGGCCAGAACCTTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: LAQPKQGGNQVALCGPTVRGCCT*ARTLLK
Trigger: CTTCAGCAAGGTTCTGGCGCAGGTGCAGCACCCCCT...GACGGTGGGACCACAGAGAGCAACCTGATTACCTCCCTGCTTGGGCTGTGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427751.5
CDS-3UTR GCA 90 bp CCAAATGAGACTTGCACACAGATGCTCCCACGTGGTCCATTCCCTCATGGTGTCCCGGGGGCTTCAGGCTaGCGGTCTGTGCCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: PNETCTQMLPRGPFPHGVPGASG*RSVPRR
Trigger: CCTCCTGGGCACAGACCGGCAGCCTGAAGCCCCCGG...GACACCATGAGGGAATGGACCACGTGGGAGCATCTGTGTGCAAGTCTCATTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR GCA 90 bp TCCACGGAGATCTGCGCCCCGTCCACACCAACACCCACGTTTGTGCACCCACATCCCTCGTGGGGCTTCTaGAGCAGCTCCTCAAACAGC +
Preference number: 4 (lower is better)
Translates to: STEICAPSTPTPTFVHPHPSWGF*SSSSNS
Trigger: GCTGTTTGAGGAGCTGCTGCAGAAGCCCCACGAGGG...ATGTGGGTGCACAAACGTGGGTGTTGGTGTGGACGGGGCGCAGATCTCCGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp GCTGTGCTGTCCGGGGAAGACACCGTGCAAATGCCAAAGTGCACTGAGGAGAGGAGGCGACGCGGGAGCTaGACTCCTGGAACAGGCCAT +
Preference number: 4 (lower is better)
Translates to: AVLSGEDTVQMPKCTEERRRRGS*TPGTGH
Trigger: ATGGCCTGTTCCAGGAGTGCAGCTCCCGCGTCGCCT...CCTCTCCTCAGTGCACTTTGGCATTTGCACGGTGTCTTCCCCGGACAGCACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp AGTTCATCCACGGAGATCTGCGCCCCGTCCACACCAACACCCACGTTTGTGCACCAGCCACGGAGGGCATaGAGGGAGAACACCACCAGG +
Preference number: 4 (lower is better)
Translates to: SSSTEICAPSTPTPTFVHQPRRA*RENTTR
Trigger: CCTGGTGGTGTTCTCCCTGCATGCCCTCCGTGGCTG...GTGCACAAACGTGGGTGTTGGTGTGGACGGGGCGCAGATCTCCGTGGATGAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR GCA 90 bp CACGGTGCTCTTCAGAGCGGCGAGGTCCTCCCCCGCGGGGAGGAATGTGGGAGACACCCAAATGAGACTTaGACACAGATGCTCCCACGT +
Preference number: 4 (lower is better)
Translates to: HGALQSGEVLPRGEECGRHPNET*TQMLPR
Trigger: ACGTGGGAGCATCTGTGTGCAAGTCTCATTTGGGTG...TCTCCCACATTCCTCCCCGCGGGGGAGGACCTCGCCGCTCTGAAGAGCACCGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR CCA 90 bp CAGATGCTCCCACGTGGTCCATTCCCTCATGGTGTCTCCGGGGTGGGCAGACTCGTAGGCGAGCAGCTCTaGGTCCTGCTGGATCTTGGA +
Preference number: 4 (lower is better)
Translates to: QMLPRGPFPHGVSGVGRLVGEQL*VLLDLG
Trigger: TCCAAGATCCAGCAGGACCCAGAGCTGCTCGCCTAC...GAGTCTGCCCACCCCGGAGACACCATGAGGGAATGGACCACGTGGGAGCATCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR CCA 90 bp AAGCTCCTCCAAGAAGGCCCCAAGGACCTTGCTGCCTGGAAAGCCATCTGTTTGGACTCCCCGTCCAGCTaGGGCCTGGCAGGAGCACCA +
Preference number: 4 (lower is better)
Translates to: KLLQEGPKDLAAWKAICLDSPSS*GLAGAP
Trigger: TGGTGCTCCTGCCAGGCCCCAGCTGGACGGGGAGTC...CAAACAGATGGCTTTCCAGGCAGCAAGGTCCTTGGGGCCTTCTTGGAGGAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CCA 90 bp TCTCGGAGCCATCAGCTCACTCCCCATCTTGCCCCTGGAGTTGAGTCACAGGCTGTAGGTGGCAGCTGCTaGGGAGGCCATGCTCACCAG +
Preference number: 4 (lower is better)
Translates to: SRSHQLTPHLAPGVESQAVGGSC*GGHAHQ
Trigger: CTGGTGAGCATGGCCTCCCCAGCAGCTGCCACCTAC...AGCCTGTGACTCAACTCCAGGGGCAAGATGGGGAGTGAGCTGATGGCTCCGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR CCA 90 bp GTGCTGTCCGGGGAAGACACCGTGCAAATGCCAAAGTGCACTGAGGAGAGGGGAGTAGGTGGCAGCTGCTaGGGAGGCCATGCTCACCAG +
Preference number: 4 (lower is better)
Translates to: VLSGEDTVQMPKCTEERGVGGSC*GGHAHQ
Trigger: CTGGTGAGCATGGCCTCCCCAGCAGCTGCCACCTAC...TCCCCTCTCCTCAGTGCACTTTGGCATTTGCACGGTGTCTTCCCCGGACAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CCA 90 bp CCAAGCTCCTCCAAGAAGGCCCCAAGGACCTTGCTGCCTGGAAAGCCATCTGTTGACACGTGCAGGAGCTaGGGCTGCAGGGTCTCCACG +
Preference number: 4 (lower is better)
Translates to: PSSSKKAPRTLLPGKPSVDTCRS*GCRVST
Trigger: CGTGGAGACCCTGCAGCCCCAGCTCCTGCACGTGTC...AACAGATGGCTTTCCAGGCAGCAAGGTCCTTGGGGCCTTCTTGGAGGAGCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CCA 90 bp ATTGCTGTGCTGTCCGGGGAAGACACCGTGCAAATGCCAAAGTGCACTGAGGAGGGGGGTCCAAAGGTGTaGGGGTCAGAGGCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: IAVLSGEDTVQMPKCTEEGGPKV*GSEASP
Trigger: GGGGCTGGCCTCTGACCCCCACACCTTTGGACCCCC...CTCCTCAGTGCACTTTGGCATTTGCACGGTGTCTTCCCCGGACAGCACAGCAAT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CCA 90 bp CTGGCATGCCCATTCCCTGAAACCCAGTCTGGTGTGGTCAACATGCCGCAGTCTCCCTGGAGGAGGGTCTaGTGGTCCAGCTGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: LACPFPETQSGVVNMPQSPWRRV*WSSCSP
Trigger: TGGGGAGCAGCTGGACCACCAGACCCTCCTCCAGGG...AGACTGCGGCATGTTGACCACACCAGACTGGGTTTCAGGGAATGGGCATGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CCA 90 bp ATGCCAAAGTGCACTGAGGAGAGGGGAGGGTCTGTGACTCCCAAACCCTCGAATCTGCCCTTCCGGGGCTaGGGAGACGTTCTGGCGAGG +
Preference number: 4 (lower is better)
Translates to: MPKCTEERGGSVTPKPSNLPFRG*GDVLAR
Trigger: CCTCGCCAGAACGTCTCCCCAGCCCCGGAAGGGCAG...ATTCGAGGGTTTGGGAGTCACAGACCCTCCCCTCTCCTCAGTGCACTTTGGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CCA 90 bp AAGCTCCTCCAAGAAGGCCCCAAGGACCTTGCTGCCTGGAAAGCCATCTGTTTGCCACCGCCCTGGTGCTaGCTCAGACCTGCCCTTCCG +
Preference number: 4 (lower is better)
Translates to: KLLQEGPKDLAAWKAICLPPPWC*LRPALP
Trigger: CGGAAGGGCAGGTCTGAGCCAGCACCAGGGCGGTGG...CAAACAGATGGCTTTCCAGGCAGCAAGGTCCTTGGGGCCTTCTTGGAGGAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CCA 90 bp CAGACGCAGTTCATCCACGGAGATCTGCGCCCCGTCCACACCAACACCCACGTTGGCCCTGGCCACAAATaGCCAGTACAGAAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: QTQFIHGDLRPVHTNTHVGPGHK*PVQKGP
Trigger: TGGCCCCTTCTGTACTGGCCATTTGTGGCCAGGGCC...AACGTGGGTGTTGGTGTGGACGGGGCGCAGATCTCCGTGGATGAACTGCGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR CCA 90 bp GCGGAACATGCTTTGGGCATTTGCCATGAGGCGGCTGGGAGTTTTGCAACAGTTCAGATTCGGGCCGGGTaGGGTGGCAGCCCAGCCACG +
Preference number: 4 (lower is better)
Translates to: AEHALGICHEAAGSFATVQIRAG*GGSPAT
Trigger: CGTGGCTGGGCTGCCACCCCACCCGGCCCGAATCTG...AACTGTTGCAAAACTCCCAGCCGCCTCATGGCAAATGCCCAAAGCATGTTCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR CAA 72 bp AACCCAGTCTGGTGTGGTCAACATGCCGCAGTCTCCTaGAGTGAGCCCGGGAGCAGAAGCCCCATCCCAGGA +
Preference number: 4 (lower is better)
Translates to: NPVWCGQHAAVS*SEPGSRSPIPG
Trigger: TCCTGGGATGGGGCTTCTGCTCCCGGGCTCACTCAAGGAGACTGCGGCATGTTGACCACACCAGACTGGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
3UTR CAA 72 bp TTGCTCTGGCACAGCCCAAGCAGGGAGGTAATCAGGTaGCTCTCTGTGGTCCCACCGTCCAGCTCCTCGGTC +
Preference number: 4 (lower is better)
Translates to: LLWHSPSREVIR*LSVVPPSSSSV
Trigger: GACCGAGGAGCTGGACGGTGGGACCACAGAGAGCAACCTGATTACCTCCCTGCTTGGGCTGTGCCAGAGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427751.5
CDS-3UTR TCA 90 bp GGTGCGGAACATGCTTTGGGCATTTGCCATGAGGCGGCTGGGAGTTTTGCAACAGCTCTCAGGCTCTGGTaGGCCCCAGGCCACGTAAGG +
Preference number: 4 (lower is better)
Translates to: GAEHALGICHEAAGSFATALRLW*APGHVR
Trigger: CCTTACGTGGCCTGGGGCTCACCAGAGCCTGAGAGC...TGTTGCAAAACTCCCAGCCGCCTCATGGCAAATGCCCAAAGCATGTTCCGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR TCA 90 bp TGGCTCCTGGCAGGCGCTGAGGATCAGCAGATCTGCACTGCCAGAGCCTGTCTGGGCACAGGAAACTGTTaGCGATCTCGGTCACTGCTG +
Preference number: 4 (lower is better)
Translates to: WLLAGAEDQQICTARACLGTGNC*RSRSLL
Trigger: CAGCAGTGACCGAGATCGTCAACAGTTTCCTGTGCC...CAGACAGGCTCTGGCAGTGCAGATCTGCTGATCCTCAGCGCCTGCCAGGAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR TCA 90 bp AGACGCAGTTCATCCACGGAGATCTGCGCCCCGTCCACACCAACACCCACGTTTATGCCGCAGTCTCCTTaGGTGAGCCCGGGAGCAGAA +
Preference number: 4 (lower is better)
Translates to: RRSSSTEICAPSTPTPTFMPQSP*VSPGAE
Trigger: TTCTGCTCCCGGGCTCACTCAAGGAGACTGCGGCAT...AAACGTGGGTGTTGGTGTGGACGGGGCGCAGATCTCCGTGGATGAACTGCGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR TCA 90 bp CACGTTTGTGCACCCACATGTGCACGGTGCTCTTCAGAGCGGCGAGGTCCTCCCAATGCCAAAGTGCACTaGGGAGAGGGGAGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: HVCAPTCARCSSERRGPPNAKVH*GEGRVC
Trigger: ACAGACCCTCCCCTCTCCTCAGTGCACTTTGGCATT...GGGAGGACCTCGCCGCTCTGAAGAGCACCGTGCACATGTGGGTGCACAAACGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp CTGGCACAGCCCAAGCAGGGAGGTAATCAGGTTGCTCTCTGTGGTCCCACCGTCGCGGCCGCCTGCTGCTaGTCTTCATACACCAGGATA +
Preference number: 4 (lower is better)
Translates to: LAQPKQGGNQVALCGPTVAAACC*SSYTRI
Trigger: TATCCTGGTGTATGAAGAGCAGCAGCAGGCGGCCGC...GACGGTGGGACCACAGAGAGCAACCTGATTACCTCCCTGCTTGGGCTGTGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427751.5
CDS-3UTR GCA 90 bp TACCTTCCAGGATGTAGGCGAGCAGCTCTGGGTCCTGCTGGATCTTGGAGCAGATCACCCGCGGCCGCCTaGTGCTGCTCTTCATACACC +
Preference number: 4 (lower is better)
Translates to: YLPGCRRAALGPAGSWSRSPAAA*CCSSYT
Trigger: GGTGTATGAAGAGCAGCAGCAGGCGGCCGCGGGTGA...TCTGCTCCAAGATCCAGCAGGACCCAGAGCTGCTCGCCTACATCCTGGAAGGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427751.5
CDS-3UTR GCA 90 bp TGGCTCCTGGCAGGCGCTGAGGATCAGCAGATCTGCACTGCCAGAGCCTGTCTGTCCAGGATCTTGTGCTaGAGCAGGTACTCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: WLLAGAEDQQICTARACLSRILC*SRYSRQ
Trigger: CTGCCTGGAGTACCTGCTGCAGCACAAGATCCTGGA...CAGACAGGCTCTGGCAGTGCAGATCTGCTGATCCTCAGCGCCTGCCAGGAGCCA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR GCA 90 bp AGACGCAGTTCATCCACGGAGATCTGCGCCCCGTCCACACCAACACCCACGTTTAGGGGGTGCTGCACCTaGGCCAGAACCTTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: RRSSSTEICAPSTPTPTFRGCCT*ARTLLK
Trigger: CTTCAGCAAGGTTCTGGCGCAGGTGCAGCACCCCCT...AAACGTGGGTGTTGGTGTGGACGGGGCGCAGATCTCCGTGGATGAACTGCGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp CACTTCCCGCCAGGCTCAGGGGCCTGGAGTCAGGGGGCGTCCTTCCCTTATCTGAGGACGGTGGTGAACTaGACCTCCTCCTTTTCTGTA +
Preference number: 4 (lower is better)
Translates to: HFPPGSGAWSQGASFPYLRTVVN*TSSFSV
Trigger: TACAGAAAAGGAGGAGGTGCAGTTCACCACCGTCCT...CAGATAAGGGAAGGACGCCCCCTGACTCCAGGCCCCTGAGCCTGGCGGGAAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR GCA 90 bp ATTGCTGTGCTGTCCGGGGAAGACACCGTGCAAATGCCAAAGTGCACTGAGGAGGGCGGCCCTCAAGGTTaGGCAGGACCAGGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: IAVLSGEDTVQMPKCTEEGGPQG*AGPGCG
Trigger: TCCACAGCCTGGTCCTGCGCAACCTTGAGGGCCGCC...CTCCTCAGTGCACTTTGGCATTTGCACGGTGTCTTCCCCGGACAGCACAGCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp AAGCTCCTCCAAGAAGGCCCCAAGGACCTTGCTGCCTGGAAAGCCATCTGTTTGGGCGGCCCTCAAGGTTaGGCAGGACCAGGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: KLLQEGPKDLAAWKAICLGGPQG*AGPGCG
Trigger: TCCACAGCCTGGTCCTGCGCAACCTTGAGGGCCGCC...CAAACAGATGGCTTTCCAGGCAGCAAGGTCCTTGGGGCCTTCTTGGAGGAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp CCAAGCTCCTCCAAGAAGGCCCCAAGGACCTTGCTGCCTGGAAAGCCATCTGTTGGCCCGTCAACTGCTTaGGCACCAGGAGCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: PSSSKKAPRTLLPGKPSVGPSTA*APGAAC
Trigger: GCAAGCTGCTCCTGGTGCGCAAGCAGTTGACGGGCC...AACAGATGGCTTTCCAGGCAGCAAGGTCCTTGGGGCCTTCTTGGAGGAGCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp CTGGCATGCCCATTCCCTGAAACCCAGTCTGGTGTGGTCAACATGCCGCAGTCTGGCCCGTCAACTGCTTaGGCACCAGGAGCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: LACPFPETQSGVVNMPQSGPSTA*APGAAC
Trigger: GCAAGCTGCTCCTGGTGCGCAAGCAGTTGACGGGCC...AGACTGCGGCATGTTGACCACACCAGACTGGGTTTCAGGGAATGGGCATGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp AAGCTCCTCCAAGAAGGCCCCAAGGACCTTGCTGCCTGGAAAGCCATCTGTTTGGCCTGGCCCGTCAACTaGTTGCGCACCAGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: KLLQEGPKDLAAWKAICLAWPVN*LRTRSS
Trigger: GCTGCTCCTGGTGCGCAAGCAGTTGACGGGCCAGGC...CAAACAGATGGCTTTCCAGGCAGCAAGGTCCTTGGGGCCTTCTTGGAGGAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp TCCTCCTGTTTCGTGTCACCTCTTGGCAACCTGTGCCTGGCTTCTAGAAGCGGCGGTCTGGGGTCTGGGTaGTCACCTGGCTGTCACCCA +
Preference number: 4 (lower is better)
Translates to: SSCFVSPLGNLCLASRSGGLGSG*SPGCHP
Trigger: TGGGTGACAGCCAGGTGAGCACCCAGACCCCAGACC...GCCGCTTCTAGAAGCCAGGCACAGGTTGCCAAGAGGTGACACGAAACAGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR GCA 90 bp GAAGACACCGTGCAAATGCCAAAGTGCACTGAGGAGAGGGGAGGGTCTGTGACTGGGCCCCCGCCTGGGTaGGGAACATGCTTTGGGCAT +
Preference number: 4 (lower is better)
Translates to: EDTVQMPKCTEERGGSVTGPPPG*GTCFGH
Trigger: ATGCCCAAAGCATGTTCCGCACCCAGGCGGGGGCCC...AGTCACAGACCCTCCCCTCTCCTCAGTGCACTTTGGCATTTGCACGGTGTCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR GCA 90 bp AGACGCAGTTCATCCACGGAGATCTGCGCCCCGTCCACACCAACACCCACGTTTTGGCCTGCTCCTCCTTaGCCAGGAGCAAAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: RRSSSTEICAPSTPTPTFWPAPP*PGAKPA
Trigger: TGCTGGCTTTGCTCCTGGGCAAGGAGGAGCAGGCCA...AAACGTGGGTGTTGGTGTGGACGGGGCGCAGATCTCCGTGGATGAACTGCGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR GCA 90 bp TCTGGCCTGCTCCTCCTTGCCCAGGAGCAAAGCCAGCAACTGTGTAGTCCCGCTCCCACCCCACCTCCCTaGTGCAGCGCTAGAAAAAGA +
Preference number: 4 (lower is better)
Translates to: SGLLLLAQEQSQQLCSPAPTPPP*CSARKR
Trigger: TCTTTTTCTAGCGCTGCAGCAGGGAGGTGGGGTGGG...AGCGGGACTACACAGTTGCTGGCTTTGCTCCTGGGCAAGGAGGAGCAGGCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR CCA 90 bp GAAGACACCGTGCAAATGCCAAAGTGCACTGAGGAGAGGGGAGGGTCTGTGACTTGGCTGTTCAAGGCCTaGGCCCCACAGGACTCCCCG +
Preference number: 4 (lower is better)
Translates to: EDTVQMPKCTEERGGSVTWLFKA*APQDSP
Trigger: CGGGGAGTCCTGTGGGGCCCAGGCCTTGAACAGCCA...AGTCACAGACCCTCCCCTCTCCTCAGTGCACTTTGGCATTTGCACGGTGTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CCA 90 bp CAGTTCATCCACGGAGATCTGCGCCCCGTCCACACCAACACCCACGTTTGTGCATCTGTACCAGGTAGGTaGCAGCTGCTGGGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: QFIHGDLRPVHTNTHVCASVPGR*QLLGRP
Trigger: TGGCCTCCCCAGCAGCTGCCACCTACCTGGTACAGA...TGCACAAACGTGGGTGTTGGTGTGGACGGGGCGCAGATCTCCGTGGATGAACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CCA 90 bp AAGCTCCTCCAAGAAGGCCCCAAGGACCTTGCTGCCTGGAAAGCCATCTGTTTGGCAGGGGAGCGAAGCTaGCGCAGCATGGCTGTGAGG +
Preference number: 4 (lower is better)
Translates to: KLLQEGPKDLAAWKAICLAGERS*RSMAVR
Trigger: CCTCACAGCCATGCTGCGCCAGCTTCGCTCCCCTGC...CAAACAGATGGCTTTCCAGGCAGCAAGGTCCTTGGGGCCTTCTTGGAGGAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CCA 90 bp TGTCACCTCTTGGCAACCTGTGCCTGGCTTCTGGCTGTCACCCAAGCTCCTCCACAGGAGCAGCTTGCCTaGGAACTGGGGTACCCTCTG +
Preference number: 4 (lower is better)
Translates to: CHLLATCAWLLAVTQAPPQEQLA*ELGYPL
Trigger: CAGAGGGTACCCCAGTTCCCAGGCAAGCTGCTCCTG...TGGAGGAGCTTGGGTGACAGCCAGAAGCCAGGCACAGGTTGCCAAGAGGTGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450006.7
CDS-3UTR CCA 90 bp CTGGCATGCCCATTCCCTGAAACCCAGTCTGGTGTGGTCAACATGCCGCAGTCTTGGAGGAGGGTCTGGTaGTCCAGCTGCTCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: LACPFPETQSGVVNMPQSWRRVW*SSCSPG
Trigger: TCCTGGGGAGCAGCTGGACCACCAGACCCTCCTCCA...AGACTGCGGCATGTTGACCACACCAGACTGGGTTTCAGGGAATGGGCATGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CCA 90 bp TCCTCCTGTTTCGTGTCACCTCTTGGCAACCTGTGCCTGGCTTCTGGCTGTCACTGGAGGAGGGTCTGGTaGTCCAGCTGCTCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: SSCFVSPLGNLCLASGCHWRRVW*SSCSPG
Trigger: TCCTGGGGAGCAGCTGGACCACCAGACCCTCCTCCA...GTGACAGCCAGAAGCCAGGCACAGGTTGCCAAGAGGTGACACGAAACAGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450006.7
CDS-3UTR CCA 90 bp GTCCACGCAATCACACCATTTATTGCTGTGCTGTCCGGGGAAGACACCGTGCAACTGCCCTTCCGGGGCTaGGGAGACGTTCTGGCGAGG +
Preference number: 4 (lower is better)
Translates to: VHAITPFIAVLSGEDTVQLPFRG*GDVLAR
Trigger: CCTCGCCAGAACGTCTCCCCAGCCCCGGAAGGGCAG...TTGCACGGTGTCTTCCCCGGACAGCACAGCAATAAATGGTGTGATTGCGTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CCA 90 bp GAGTCTGGCTCCTGGCAGGCGCTGAGGATCAGCAGATCTGCACTGCCAGAGCCTGTGCGGAACATGCTTTaGGCATTTGCCATGAGGCGG +
Preference number: 4 (lower is better)
Translates to: ESGSWQALRISRSALPEPVRNML*AFAMRR
Trigger: CCGCCTCATGGCAAATGCCCAAAGCATGTTCCGCAC...AGGCTCTGGCAGTGCAGATCTGCTGATCCTCAGCGCCTGCCAGGAGCCAGACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR CAA 72 bp GGCCCCAAGGACCTTGCTGCCTGGAAAGCCATCTGTTaGGCTCCTTGGCACCTGGCATGCCCATTCCCTGAA +
Preference number: 4 (lower is better)
Translates to: GPKDLAAWKAIC*APWHLACPFPE
Trigger: TTCAGGGAATGGGCATGCCAGGTGCCAAGGAGCCAAACAGATGGCTTTCCAGGCAGCAAGGTCCTTGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR TCA 90 bp GAAGACACCGTGCAAATGCCAAAGTGCACTGAGGAGAGGGGAGGGTCTGTGACTGGACCAGGCTGTGGATaGTCCCCTCGTGGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: EDTVQMPKCTEERGGSVTGPGCG*SPRGAS
Trigger: AGAAGCCCCACGAGGGGATCATCCACAGCCTGGTCC...AGTCACAGACCCTCCCCTCTCCTCAGTGCACTTTGGCATTTGCACGGTGTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR TCA 90 bp GACACCGTGCAAATGCCAAAGTGCACTGAGGAGAGGGGAGGGTCTGTGACTCCCCCAGGAAGCTGTCGGTaGAGTAGGGGTCTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: DTVQMPKCTEERGGSVTPPGSCR*SRGLPP
Trigger: TGGAGGAAGACCCCTACTTCACCGACAGCTTCCTGG...GGGAGTCACAGACCCTCCCCTCTCCTCAGTGCACTTTGGCATTTGCACGGTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp GAGTCTGGCTCCTGGCAGGCGCTGAGGATCAGCAGATCTGCACTGCCAGAGCCTAGGATATCCAGCATCTaGTTCAGCCGCCAGGGAATG +
Preference number: 4 (lower is better)
Translates to: ESGSWQALRISRSALPEPRISSI*FSRQGM
Trigger: CATTCCCTGGCGGCTGAAGCAGATGCTGGATATCCT...AGGCTCTGGCAGTGCAGATCTGCTGATCCTCAGCGCCTGCCAGGAGCCAGACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR GCA 90 bp AAGGACCTTGCTGCCTGGAAAGCCATCTGTTTGGCTCCTTGGCACCTGGCATGCAGGGGGTGCTGCACCTaGGCCAGAACCTTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: KDLAAWKAICLAPWHLACRGCCT*ARTLLK
Trigger: CTTCAGCAAGGTTCTGGCGCAGGTGCAGCACCCCCT...GCATGCCAGGTGCCAAGGAGCCAAACAGATGGCTTTCCAGGCAGCAAGGTCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp AGTTCATCCACGGAGATCTGCGCCCCGTCCACACCAACACCCACGTTTGTGCACTACAACTGGCAAAGGTaGCGGACGATCGCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: SSSTEICAPSTPTPTFVHYNWQR*RTIAGQ
Trigger: CTGCCCTGCGATCGTCCGGCACCTTTGCCAGTTGTA...GTGCACAAACGTGGGTGTTGGTGTGGACGGGGCGCAGATCTCCGTGGATGAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp AGTTCATCCACGGAGATCTGCGCCCCGTCCACACCAACACCCACGTTTGTGCACCGCAACCACCGTGTGTaGCTCTGTGATGAGGTGGTC +
Preference number: 4 (lower is better)
Translates to: SSSTEICAPSTPTPTFVHRNHRV*LCDEVV
Trigger: GACCACCTCATCACAGAGGCACACACGGTGGTTGCG...GTGCACAAACGTGGGTGTTGGTGTGGACGGGGCGCAGATCTCCGTGGATGAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp CTCCTGTTTCGTGTCACCTCTTGGCAACCTGTGCCTGGCTTCTGGCTGTCACCCGAGGTCAAGATGCTCTaGTCGGACACGTGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: LLFRVTSWQPVPGFWLSPEVKML*SDTCRS
Trigger: GCTCCTGCACGTGTCCGAGCAGAGCATCTTGACCTC...GGGTGACAGCCAGAAGCCAGGCACAGGTTGCCAAGAGGTGACACGAAACAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450006.7
CDS-3UTR GCA 90 bp TCCACGGAGATCTGCGCCCCGTCCACACCAACACCCACGTTTGTGCACCCACATCCAGAATCCGGGACATaGGGTCAAACAGCACTCGGA +
Preference number: 4 (lower is better)
Translates to: STEICAPSTPTPTFVHPHPESGT*GQTALG
Trigger: TCCGAGTGCTGTTTGACCGCATGTCCCGGATTCTGG...ATGTGGGTGCACAAACGTGGGTGTTGGTGTGGACGGGGCGCAGATCTCCGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp GTTTGGCTCCTTGGCACCTGGCATGCCCATTCCCTGAAACCCAGTCTGGTGTGGAGGACCGAGGTCACCTaGAGGTTCAGGCTGTATGGC +
Preference number: 4 (lower is better)
Translates to: VWLLGTWHAHSLKPSLVWRTEVT*RFRLYG
Trigger: GCCATACAGCCTGAACCTGCAGGTGACCTCGGTCCT...CCACACCAGACTGGGTTTCAGGGAATGGGCATGCCAGGTGCCAAGGAGCCAAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp CACGCAATCACACCATTTATTGCTGTGCTGTCCGGGGAAGACACCGTGCAAATGGTCTGGTGGTCCAGCTaGTCCCCAGGAGCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: HAITPFIAVLSGEDTVQMVWWSS*SPGAWP
Trigger: GGGCCAGGCTCCTGGGGAGCAGCTGGACCACCAGAC...CATTTGCACGGTGTCTTCCCCGGACAGCACAGCAATAAATGGTGTGATTGCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp GCAATCACACCATTTATTGCTGTGCTGTCCGGGGAAGACACCGTGCAAATGCCAGTGCTGGCTCAGACCTaGCCTTCCGGGGCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: AITPFIAVLSGEDTVQMPVLAQT*PSGAGE
Trigger: CTCCCCAGCCCCGGAAGGGCAGGTCTGAGCCAGCAC...TGGCATTTGCACGGTGTCTTCCCCGGACAGCACAGCAATAAATGGTGTGATTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp GGCTCCTGGCAGGCGCTGAGGATCAGCAGATCTGCACTGCCAGAGCCTGTCTGTCCCCAAGGACCTTGCTaGCTGGAAAGCCATCTGTTT +
Preference number: 4 (lower is better)
Translates to: GSWQALRISRSALPEPVCPQGPC*LESHLF
Trigger: AAACAGATGGCTTTCCAGGCAGCAAGGTCCTTGGGG...ACAGACAGGCTCTGGCAGTGCAGATCTGCTGATCCTCAGCGCCTGCCAGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR GCA 90 bp CCTTGGCACCTGGCATGCCCATTCCCTGAAACCCAGTCTGGTGTGGTCAACATGCCCACATGTGCACGGTaGTCTTCAGAGCGGCGAGGT +
Preference number: 4 (lower is better)
Translates to: PWHLACPFPETQSGVVNMPTCAR*SSERRG
Trigger: ACCTCGCCGCTCTGAAGAGCACCGTGCACATGTGGG...CATGTTGACCACACCAGACTGGGTTTCAGGGAATGGGCATGCCAGGTGCCAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp GTGCTGTCCGGGGAAGACACCGTGCAAATGCCAAAGTGCACTGAGGAGAGGGGATCATCCACGGAGATCTaGGCCCCGTCCACACCAACA +
Preference number: 4 (lower is better)
Translates to: VLSGEDTVQMPKCTEERGSSTEI*APSTPT
Trigger: TGTTGGTGTGGACGGGGCGCAGATCTCCGTGGATGA...TCCCCTCTCCTCAGTGCACTTTGGCATTTGCACGGTGTCTTCCCCGGACAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp TCCGGGGAAGACACCGTGCAAATGCCAAAGTGCACTGAGGAGAGGGGAGGGTCTTCATCCACGGAGATCTaGGCCCCGTCCACACCAACA +
Preference number: 4 (lower is better)
Translates to: SGEDTVQMPKCTEERGGSSSTEI*APSTPT
Trigger: TGTTGGTGTGGACGGGGCGCAGATCTCCGTGGATGA...AGACCCTCCCCTCTCCTCAGTGCACTTTGGCATTTGCACGGTGTCTTCCCCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp TCTCGGAGCCATCAGCTCACTCCCCATCTTGCCCCTGGAGTTGAGTCACAGGCTCAGCAGAAGTGGCACTaGTCCGCCAAGAGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: SRSHQLTPHLAPGVESQAQQKWH*SAKSLA
Trigger: AGCCAGACTCTTGGCGGAGCAGTGCCACTTCTGCTG...AGCCTGTGACTCAACTCCAGGGGCAAGATGGGGAGTGAGCTGATGGCTCCGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR CCA 90 bp GGATATCCAGCATCTGCTTCAGCCGCCAGGGAATGTCTGTCTTCTTGGCGGGGGGTAGGCGAGCAGCTCTaGGTCCTGCTGGATCTTGGA +
Preference number: 4 (lower is better)
Translates to: GYPASASAARECLSSWRGVGEQL*VLLDLG
Trigger: TCCAAGATCCAGCAGGACCCAGAGCTGCTCGCCTAC...CCCCCGCCAAGAAGACAGACATTCCCTGGCGGCTGAAGCAGATGCTGGATATCC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000427751.5
CDS-3UTR CCA 90 bp TCCTCCTGTTTCGTGTCACCTCTTGGCAACCTGTGCCTGGCTTCTAGAAGCGGCAGCAGCAGGTTCTCCTaGGCCTTCAAGGCCACCCGA +
Preference number: 4 (lower is better)
Translates to: SSCFVSPLGNLCLASRSGSSRFS*AFKATR
Trigger: TCGGGTGGCCTTGAAGGCCCAGGAGAACCTGCTGCT...GCCGCTTCTAGAAGCCAGGCACAGGTTGCCAAGAGGTGACACGAAACAGGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR CCA 90 bp GTTTCCTCCTGTTTCGTGTCACCTCTTGGCAACCTGTGCCTGGCTTCTAGAAGCGACACGTGCAGGAGCTaGGGCTGCAGGGTCTCCACG +
Preference number: 4 (lower is better)
Translates to: VSSCFVSPLGNLCLASRSDTCRS*GCRVST
Trigger: CGTGGAGACCCTGCAGCCCCAGCTCCTGCACGTGTC...GCTTCTAGAAGCCAGGCACAGGTTGCCAAGAGGTGACACGAAACAGGAGGAAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR CCA 90 bp TCCTCCTGTTTCGTGTCACCTCTTGGCAACCTGTGCCTGGCTTCTGGCTGTCACTGGATGATCCCCTCGTaGGGCTTCTGCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SSCFVSPLGNLCLASGCHWMIPS*GFCSSS
Trigger: GGAGCTGCTGCAGAAGCCCCACGAGGGGATCATCCA...GTGACAGCCAGAAGCCAGGCACAGGTTGCCAAGAGGTGACACGAAACAGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450006.7
CDS-3UTR CCA 90 bp CGCAATCACACCATTTATTGCTGTGCTGTCCGGGGAAGACACCGTGCAAATGCCCGCAGGACCAGGCTGTaGATGATCCCCTCGTGGGGC +
Preference number: 4 (lower is better)
Translates to: RNHTIYCCAVRGRHRANARRTRL*MIPSWG
Trigger: GCCCCACGAGGGGATCATCCACAGCCTGGTCCTGCG...GGCATTTGCACGGTGTCTTCCCCGGACAGCACAGCAATAAATGGTGTGATTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CCA 90 bp CCATTTATTGCTGTGCTGTCCGGGGAAGACACCGTGCAAATGCCAAAGTGCACTGGGGGTCCAAAGGTGTaGGGGTCAGAGGCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: PFIAVLSGEDTVQMPKCTGGPKV*GSEASP
Trigger: GGGGCTGGCCTCTGACCCCCACACCTTTGGACCCCC...AGTGCACTTTGGCATTTGCACGGTGTCTTCCCCGGACAGCACAGCAATAAATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CCA 90 bp CGCAATCACACCATTTATTGCTGTGCTGTCCGGGGAAGACACCGTGCAAATGCCGGTCGCTCGGGCTCATaGGGGTCCAAAGGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: RNHTIYCCAVRGRHRANAGRSGS*GSKGVG
Trigger: CCCCACACCTTTGGACCCCCATGAGCCCGAGCGACC...GGCATTTGCACGGTGTCTTCCCCGGACAGCACAGCAATAAATGGTGTGATTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CCA 90 bp TCTGGCCTGCTCCTCCTTGCCCAGGAGCAAAGCCAGCAACTGTGTAGTCCCGCTAGCTTGCCTGGGAACTaGGGTACCCTCTGGATTCTC +
Preference number: 4 (lower is better)
Translates to: SGLLLLAQEQSQQLCSPASLPGN*GTLWIL
Trigger: GAGAATCCAGAGGGTACCCCAGTTCCCAGGCAAGCT...AGCGGGACTACACAGTTGCTGGCTTTGCTCCTGGGCAAGGAGGAGCAGGCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR CCA 90 bp GTCCACGCAATCACACCATTTATTGCTGTGCTGTCCGGGGAAGACACCGTGCAACCCTGGAGGAGGGTCTaGTGGTCCAGCTGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: VHAITPFIAVLSGEDTVQPWRRV*WSSCSP
Trigger: TGGGGAGCAGCTGGACCACCAGACCCTCCTCCAGGG...TTGCACGGTGTCTTCCCCGGACAGCACAGCAATAAATGGTGTGATTGCGTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CCA 90 bp TATGAATCTAAGAGTCCAGACGCAGTTCATCCACGGAGATCTGCGCCCCGTCCAAGCACCACCACGCCCTaGAGGAGGGTCTGGTGGTCC +
Preference number: 4 (lower is better)
Translates to: YESKSPDAVHPRRSAPRPSTTTP*RRVWWS
Trigger: GGACCACCAGACCCTCCTCCAGGGCGTGGTGGTGCT...TGGACGGGGCGCAGATCTCCGTGGATGAACTGCGTCTGGACTCTTAGATTCATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CCA 90 bp TGGCTCCTGGCAGGCGCTGAGGATCAGCAGATCTGCACTGCCAGAGCCTGTCTGATCTGTTTGGCTCCTTaGCACCTGGCATGCCCATTC +
Preference number: 4 (lower is better)
Translates to: WLLAGAEDQQICTARACLICLAP*HLACPF
Trigger: GAATGGGCATGCCAGGTGCCAAGGAGCCAAACAGAT...CAGACAGGCTCTGGCAGTGCAGATCTGCTGATCCTCAGCGCCTGCCAGGAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR CCA 90 bp CAGATGCTCCCACGTGGTCCATTCCCTCATGGTGTCTCCGGGGTGGGCAGACTCACAGATGCTCCCACGTaGTCCATTCCCTCATGGTGT +
Preference number: 4 (lower is better)
Translates to: QMLPRGPFPHGVSGVGRLTDAPT*SIPSWC
Trigger: ACACCATGAGGGAATGGACCACGTGGGAGCATCTGT...GAGTCTGCCCACCCCGGAGACACCATGAGGGAATGGACCACGTGGGAGCATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR TCA 90 bp CTCCTGTTTCGTGTCACCTCTTGGCAACCTGTGCCTGGCTTCTGGCTGTCACCCGCGCCAGAACCTTGCTaGAGAACTGGAACACCTGCT +
Preference number: 4 (lower is better)
Translates to: LLFRVTSWQPVPGFWLSPAPEPC*RTGTPA
Trigger: AGCAGGTGTTCCAGTTCTTCAGCAAGGTTCTGGCGC...GGGTGACAGCCAGAAGCCAGGCACAGGTTGCCAAGAGGTGACACGAAACAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450006.7
CDS-3UTR TCA 90 bp TGGGTCCTGCTGGATCTTGGAGCAGAGGACGGTGGTGAACTGCACCTCCTCCTTAGCAGAGGACGGTGGTaGACTGCACCTCCTCCTTTT +
Preference number: 4 (lower is better)
Translates to: WVLLDLGAEDGGELHLLLSRGRW*TAPPPF
Trigger: AAAAGGAGGAGGTGCAGTTCACCACCGTCCTCTGCT...AAGGAGGAGGTGCAGTTCACCACCGTCCTCTGCTCCAAGATCCAGCAGGACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427751.5
CDS-3UTR TCA 90 bp CCTTGGCACCTGGCATGCCCATTCCCTGAAACCCAGTCTGGTGTGGTCAACATGCAATGCCCGATGAGATaGGCATACAGGGTGTGGGGG +
Preference number: 4 (lower is better)
Translates to: PWHLACPFPETQSGVVNMQCPMR*AYRVWG
Trigger: CCCCCACACCCTGTATGCTCATCTCATCGGGCATTG...CATGTTGACCACACCAGACTGGGTTTCAGGGAATGGGCATGCCAGGTGCCAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR TCA 90 bp AGTTCATCCACGGAGATCTGCGCCCCGTCCACACCAACACCCACGTTTGTGCACGGCACAGGAAACTGTTaGCGATCTCGGTCACTGCTG +
Preference number: 4 (lower is better)
Translates to: SSSTEICAPSTPTPTFVHGTGNC*RSRSLL
Trigger: CAGCAGTGACCGAGATCGTCAACAGTTTCCTGTGCC...GTGCACAAACGTGGGTGTTGGTGTGGACGGGGCGCAGATCTCCGTGGATGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR TCA 90 bp GCAATCACACCATTTATTGCTGTGCTGTCCGGGGAAGACACCGTGCAAATGCCAAGCCGGGGGCCAGGCTaGTGTACGGATCCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: AITPFIAVLSGEDTVQMPSRGPG*CTDPAG
Trigger: ACCTGCTGGATCCGTACATCAGCCTGGCCCCCGGCT...TGGCATTTGCACGGTGTCTTCCCCGGACAGCACAGCAATAAATGGTGTGATTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR TCA 90 bp AGTTCATCCACGGAGATCTGCGCCCCGTCCACACCAACACCCACGTTTGTGCACAATGCCAAAGTGCACTaGGGAGAGGGGAGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: SSSTEICAPSTPTPTFVHNAKVH*GEGRVC
Trigger: ACAGACCCTCCCCTCTCCTCAGTGCACTTTGGCATT...GTGCACAAACGTGGGTGTTGGTGTGGACGGGGCGCAGATCTCCGTGGATGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR TCA 90 bp AGGGCAGTGGGTTCTCCGCATGCTTTCTTCCTACCTACAATCTTTTTACCTTCCTCCCACGTCCCGGGGTaGCGGGAAGGGCGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: RAVGSPHAFFLPTIFLPSSHVPG*REGRPA
Trigger: TGCAGGACGCCCTTCCCGTCACCCCGGGACGTGGGA...GGAAGGTAAAAAGATTGTAGGTAGGAAGAAAGCATGCGGAGAACCCACTGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427751.5
CDS-3UTR GCA 90 bp CCCGTGGCTGGTTGTGTCCTTAGGCAGGGCAGTGGGTTCTCCGCATGCTTTCTTTCCAGGATCTTGTGCTaGAGCAGGTACTCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: PVAGCVLRQGSGFSACFLSRILC*SRYSRQ
Trigger: CTGCCTGGAGTACCTGCTGCAGCACAAGATCCTGGA...AAGAAAGCATGCGGAGAACCCACTGCCCTGCCTAAGGACACAACCAGCCACGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427751.5
CDS-3UTR GCA 90 bp CAGCCGCCAGGGAATGTCTGTCTTCTTGGCGGGGGTGCTTTCATCTGTGCTCTCGTCTCCAGGATCTTGTaGTGCAGCAGGTACTCCAGG +
Preference number: 4 (lower is better)
Translates to: QPPGNVCLLGGGAFICALVSRIL*CSRYSR
Trigger: CCTGGAGTACCTGCTGCAGCACAAGATCCTGGAGAC...GAGAGCACAGATGAAAGCACCCCCGCCAAGAAGACAGACATTCCCTGGCGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427751.5
CDS-3UTR GCA 90 bp AGACGCAGTTCATCCACGGAGATCTGCGCCCCGTCCACACCAACACCCACGTTTGTCTCCAGGATCTTGTaGTGCAGCAGGTACTCCAGG +
Preference number: 4 (lower is better)
Translates to: RRSSSTEICAPSTPTPTFVSRIL*CSRYSR
Trigger: CCTGGAGTACCTGCTGCAGCACAAGATCCTGGAGAC...AAACGTGGGTGTTGGTGTGGACGGGGCGCAGATCTCCGTGGATGAACTGCGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp GTGCGGAACATGCTTTGGGCATTTGCCATGAGGCGGCTGGGAGTTTTGCAACAGCGGCCTTGCCCAGCGTaGAGAGAGTCTCCAGGATCT +
Preference number: 4 (lower is better)
Translates to: VRNMLWAFAMRRLGVLQQRPCPA*RESPGS
Trigger: AGATCCTGGAGACTCTCTGCACGCTGGGCAAGGCCG...CTGTTGCAAAACTCCCAGCCGCCTCATGGCAAATGCCCAAAGCATGTTCCGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR GCA 90 bp GAGCAGAGGACGGTGGTGAACTGCACCTCCTCCTTTTCTGTAACGGATCCGGAACGGCCTTGCCCAGCGTaGAGAGAGTCTCCAGGATCT +
Preference number: 4 (lower is better)
Translates to: EQRTVVNCTSSFSVTDPERPCPA*RESPGS
Trigger: AGATCCTGGAGACTCTCTGCACGCTGGGCAAGGCCG...TTCCGGATCCGTTACAGAAAAGGAGGAGGTGCAGTTCACCACCGTCCTCTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427751.5
CDS-3UTR GCA 90 bp GTCCACGCAATCACACCATTTATTGCTGTGCTGTCCGGGGAAGACACCGTGCAAGCACCAGGAGCAGCTTaGCTGGGAACTGGGGTACCC +
Preference number: 4 (lower is better)
Translates to: VHAITPFIAVLSGEDTVQAPGAA*LGTGVP
Trigger: GGGTACCCCAGTTCCCAGGCAAGCTGCTCCTGGTGC...TTGCACGGTGTCTTCCCCGGACAGCACAGCAATAAATGGTGTGATTGCGTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp AAGGACCTTGCTGCCTGGAAAGCCATCTGTTTGGCTCCTTGGCACCTGGCATGCGGCGGCTGGGAGTTTTaGAACAGTTTCCAGGGGAGC +
Preference number: 4 (lower is better)
Translates to: KDLAAWKAICLAPWHLACGGWEF*NSFQGS
Trigger: GCTCCCCTGGAAACTGTTGCAAAACTCCCAGCCGCC...GCATGCCAGGTGCCAAGGAGCCAAACAGATGGCTTTCCAGGCAGCAAGGTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR GCA 90 bp ACCCAAGCTCCTCCAAGAAGGCCCCAAGGACCTTGCTGCCTGGAAAGCCATCTGCATGCTTTGGGCATTTaGCATGAGGCGGCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: TQAPPRRPQGPCCLESHLHALGI*HEAAGS
Trigger: ACTCCCAGCCGCCTCATGGCAAATGCCCAAAGCATG...CAGATGGCTTTCCAGGCAGCAAGGTCCTTGGGGCCTTCTTGGAGGAGCTTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR GCA 90 bp TCCGGGGAAGACACCGTGCAAATGCCAAAGTGCACTGAGGAGAGGGGAGGGTCTCCGCCCGTGTATTCCTaGAGGTCAAGACAGATTCGG +
Preference number: 4 (lower is better)
Translates to: SGEDTVQMPKCTEERGGSPPVYS*RSRQIR
Trigger: CCGAATCTGTCTTGACCTGCAGGAATACACGGGCGG...AGACCCTCCCCTCTCCTCAGTGCACTTTGGCATTTGCACGGTGTCTTCCCCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR GCA 90 bp ACCCAAGCTCCTCCAAGAAGGCCCCAAGGACCTTGCTGCCTGGAAAGCCATCTGTTGTGCACCCACATGTaGACGGTGCTCTTCAGAGCG +
Preference number: 4 (lower is better)
Translates to: TQAPPRRPQGPCCLESHLLCTHM*TVLFRA
Trigger: CGCTCTGAAGAGCACCGTGCACATGTGGGTGCACAA...CAGATGGCTTTCCAGGCAGCAAGGTCCTTGGGGCCTTCTTGGAGGAGCTTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp TCCGGGGAAGACACCGTGCAAATGCCAAAGTGCACTGAGGAGAGGGGAGGGTCTCCGGGGAAGACACCGTaGAAATGCCAAAGTGCACTG +
Preference number: 4 (lower is better)
Translates to: SGEDTVQMPKCTEERGGSPGKTP*KCQSAL
Trigger: CAGTGCACTTTGGCATTTGCACGGTGTCTTCCCCGG...AGACCCTCCCCTCTCCTCAGTGCACTTTGGCATTTGCACGGTGTCTTCCCCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp TCCTCCTTTTCTGTAACGGATCCGGAAGCAGTCCCACCAAGTCGGAGGAGTTTCACGGGAAGGGCGTCCTaGACCCCAACAAGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: SSFSVTDPEAVPPSRRSFTGRAS*TPTRSW
Trigger: CCAGGACCTTGTTGGGGTGCAGGACGCCCTTCCCGT...GAAACTCCTCCGACTTGGTGGGACTGCTTCCGGATCCGTTACAGAAAAGGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427751.5
CDS-3UTR CCA 90 bp GCAATCACACCATTTATTGCTGTGCTGTCCGGGGAAGACACCGTGCAAATGCCATGGCTGTTCAAGGCCTaGGCCCCACAGGACTCCCCG +
Preference number: 4 (lower is better)
Translates to: AITPFIAVLSGEDTVQMPWLFKA*APQDSP
Trigger: CGGGGAGTCCTGTGGGGCCCAGGCCTTGAACAGCCA...TGGCATTTGCACGGTGTCTTCCCCGGACAGCACAGCAATAAATGGTGTGATTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CCA 90 bp GGCAGAAGGTGGGGAAACTTGGCCAAGAACAGAGCCACGGTGTCCACGCAATCACGACTCTTCTTGCTCTaGCACAGCCCAAGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: GRRWGNLAKNRATVSTQSRLFLL*HSPSRE
Trigger: CTCCCTGCTTGGGCTGTGCCAGAGCAAGAAGAGTCG...TGATTGCGTGGACACCGTGGCTCTGTTCTTGGCCAAGTTTCCCCACCTTCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR CCA 90 bp GAAGACACCGTGCAAATGCCAAAGTGCACTGAGGAGAGGGGAGGGTCTGTGACTTCTGTACCAGGTAGGTaGCAGCTGCTGGGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: EDTVQMPKCTEERGGSVTSVPGR*QLLGRP
Trigger: TGGCCTCCCCAGCAGCTGCCACCTACCTGGTACAGA...AGTCACAGACCCTCCCCTCTCCTCAGTGCACTTTGGCATTTGCACGGTGTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CCA 90 bp GTGCGGAACATGCTTTGGGCATTTGCCATGAGGCGGCTGGGAGTTTTGCAACAGCAGGAGCAGCTTGCCTaGGAACTGGGGTACCCTCTG +
Preference number: 4 (lower is better)
Translates to: VRNMLWAFAMRRLGVLQQQEQLA*ELGYPL
Trigger: CAGAGGGTACCCCAGTTCCCAGGCAAGCTGCTCCTG...CTGTTGCAAAACTCCCAGCCGCCTCATGGCAAATGCCCAAAGCATGTTCCGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR CCA 90 bp CACGCAATCACACCATTTATTGCTGTGCTGTCCGGGGAAGACACCGTGCAAATGTGCTCCCCAGGAGCCTaGCCCGTCAACTGCTTGCGC +
Preference number: 4 (lower is better)
Translates to: HAITPFIAVLSGEDTVQMCSPGA*PVNCLR
Trigger: GCGCAAGCAGTTGACGGGCCAGGCTCCTGGGGAGCA...CATTTGCACGGTGTCTTCCCCGGACAGCACAGCAATAAATGGTGTGATTGCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CCA 90 bp AAGCTCCTCCAAGAAGGCCCCAAGGACCTTGCTGCCTGGAAAGCCATCTGTTTGGTCTGGGTGCTCACCTaGCTGTCACCCAAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: KLLQEGPKDLAAWKAICLVWVLT*LSPKLL
Trigger: GAGGAGCTTGGGTGACAGCCAGGTGAGCACCCAGAC...CAAACAGATGGCTTTCCAGGCAGCAAGGTCCTTGGGGCCTTCTTGGAGGAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR CCA 90 bp TCTCGGAGCCATCAGCTCACTCCCCATCTTGCCCCTGGAGTTGAGTCACAGGCTTCACAGGCTTGGCCCTaGCCACAAATGGCCAGTACA +
Preference number: 4 (lower is better)
Translates to: SRSHQLTPHLAPGVESQASQAWP*PQMAST
Trigger: TGTACTGGCCATTTGTGGCCAGGGCCAAGCCTGTGA...AGCCTGTGACTCAACTCCAGGGGCAAGATGGGGAGTGAGCTGATGGCTCCGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR CCA 90 bp CCTTGGCACCTGGCATGCCCATTCCCTGAAACCCAGTCTGGTGTGGTCAACATGGTTGAGTCACAGGCTTaGCCCTGGCCACAAATGGCC +
Preference number: 4 (lower is better)
Translates to: PWHLACPFPETQSGVVNMVESQA*PWPQMA
Trigger: GGCCATTTGTGGCCAGGGCCAAGCCTGTGACTCAAC...CATGTTGACCACACCAGACTGGGTTTCAGGGAATGGGCATGCCAGGTGCCAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR CCA 90 bp AGTCCAGACGCAGTTCATCCACGGAGATCTGCGCCCCGTCCACACCAACACCCATTTCGTGTCACCTCTTaGCAACCTGTGCCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: SPDAVHPRRSAPRPHQHPFRVTS*QPVPGF
Trigger: GAAGCCAGGCACAGGTTGCCAAGAGGTGACACGAAA...TGGGTGTTGGTGTGGACGGGGCGCAGATCTCCGTGGATGAACTGCGTCTGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CCA 90 bp GACACCGTGCAAATGCCAAAGTGCACTGAGGAGAGGGGAGGGTCTGTGACTCCCGAAGGTGGGGAAACTTaGCCAAGAACAGAGCCACGG +
Preference number: 4 (lower is better)
Translates to: DTVQMPKCTEERGGSVTPEGGET*PRTEPR
Trigger: CCGTGGCTCTGTTCTTGGCCAAGTTTCCCCACCTTC...GGGAGTCACAGACCCTCCCCTCTCCTCAGTGCACTTTGGCATTTGCACGGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR CCA 90 bp CCTTGGCACCTGGCATGCCCATTCCCTGAAACCCAGTCTGGTGTGGTCAACATGTCAGCCCAGCAGAAGTaGCACTGCTCCGCCAAGAGT +
Preference number: 4 (lower is better)
Translates to: PWHLACPFPETQSGVVNMSAQQK*HCSAKS
Trigger: ACTCTTGGCGGAGCAGTGCCACTTCTGCTGGGCTGA...CATGTTGACCACACCAGACTGGGTTTCAGGGAATGGGCATGCCAGGTGCCAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR CCA 90 bp CCAAATGAGACTTGCACACAGATGCTCCCACGTGGTCCATTCCCTCATGGTGTCATGGTGTCTCCGGGGTaGGCAGACTCTCCGCTGCAG +
Preference number: 4 (lower is better)
Translates to: PNETCTQMLPRGPFPHGVMVSPG*ADSPLQ
Trigger: CTGCAGCGGAGAGTCTGCCCACCCCGGAGACACCAT...GACACCATGAGGGAATGGACCACGTGGGAGCATCTGTGTGCAAGTCTCATTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR CCA 90 bp GGGCAGTGGGTTCTCCGCATGCTTTCTTCCTACCTACAATCTTTTTACCTTCCAGGGCTCGCGCCTTCGTaGGGACTTGGACCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GQWVLRMLSSYLQSFYLPGLAPS*GLGPAG
Trigger: CCCTGCCGGTCCAAGTCCCCACGAAGGCGCGAGCCC...TGGAAGGTAAAAAGATTGTAGGTAGGAAGAAAGCATGCGGAGAACCCACTGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427751.5
CDS-3UTR TCA 90 bp CTGCCTGGAAAGCCATCTGTTTGGCTCCTTGGCACCTGGCATGCCCATTCCCTGGGTCACAATGCCCGATaGGATGAGCATACAGGGTGT +
Preference number: 4 (lower is better)
Translates to: LPGKPSVWLLGTWHAHSLGHNAR*DEHTGC
Trigger: ACACCCTGTATGCTCATCTCATCGGGCATTGTGACC...CAGGGAATGGGCATGCCAGGTGCCAAGGAGCCAAACAGATGGCTTTCCAGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR TCA 90 bp ATTGCTGTGCTGTCCGGGGAAGACACCGTGCAAATGCCAAAGTGCACTGAGGAGCCAGGAAGCTGTCGGTaGAGTAGGGGTCTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: IAVLSGEDTVQMPKCTEEPGSCR*SRGLPP
Trigger: TGGAGGAAGACCCCTACTTCACCGACAGCTTCCTGG...CTCCTCAGTGCACTTTGGCATTTGCACGGTGTCTTCCCCGGACAGCACAGCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR TCA 90 bp TCCTCCTGTTTCGTGTCACCTCTTGGCAACCTGTGCCTGGCTTCTAGAAGCGGCGGCTTTGCGGGAGTTTaGAAGCCGGAATCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: SSCFVSPLGNLCLASRSGGFAGV*KPESRK
Trigger: CTTCCTGGATTCCGGCTTTCAAACTCCCGCAAAGCC...GCCGCTTCTAGAAGCCAGGCACAGGTTGCCAAGAGGTGACACGAAACAGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR TCA 90 bp CCAAGCTCCTCCAAGAAGGCCCCAAGGACCTTGCTGCCTGGAAAGCCATCTGTTTCCAGCAGGTACTCATaGATATGGGGGTGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: PSSSKKAPRTLLPGKPSVSSRYS*IWGWGK
Trigger: CTTCCCCCACCCCCATATTCATGAGTACCTGCTGGA...AACAGATGGCTTTCCAGGCAGCAAGGTCCTTGGGGCCTTCTTGGAGGAGCTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR TCA 90 bp CCTTGCTGCCTGGAAAGCCATCTGTTTGGCTCCTTGGCACCTGGCATGCCCATTAGAGGGGAGGGTCTGTaGCTCCCAAACCCTCGAATA +
Preference number: 4 (lower is better)
Translates to: PCCLESHLFGSLAPGMPIRGEGL*LPNPRI
Trigger: TATTCGAGGGTTTGGGAGTCACAGACCCTCCCCTCT...AATGGGCATGCCAGGTGCCAAGGAGCCAAACAGATGGCTTTCCAGGCAGCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp CTCCTTTTCTGTAACGGATCCGGAAGCAGTCCCACCAAGTCGGAGGAGTTTCTGTGCTCCACGAAGGCCTaGAGCAGGTCAATGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LLFCNGSGSSPTKSEEFLCSTKA*SRSMLG
Trigger: GCCCAGCATTGACCTGCTGCAGGCCTTCGTGGAGCA...CAGAAACTCCTCCGACTTGGTGGGACTGCTTCCGGATCCGTTACAGAAAAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427751.5
CDS-3UTR GCA 90 bp TATGAATCTAAGAGTCCAGACGCAGTTCATCCACGGAGATCTGCGCCCCGTCCATGCTCCACGAAGGCCTaGAGCAGGTCAATGCTGGGC +
Preference number: 4 (lower is better)
Translates to: YESKSPDAVHPRRSAPRPCSTKA*SRSMLG
Trigger: GCCCAGCATTGACCTGCTGCAGGCCTTCGTGGAGCA...TGGACGGGGCGCAGATCTCCGTGGATGAACTGCGTCTGGACTCTTAGATTCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp AGTTCATCCACGGAGATCTGCGCCCCGTCCACACCAACACCCACGTTTGTGCACTCTTCTTGGCGGGGGTaGTTTCATCTGTGCTCTCGA +
Preference number: 4 (lower is better)
Translates to: SSSTEICAPSTPTPTFVHSSWRG*FHLCSR
Trigger: TCGAGAGCACAGATGAAAGCACCCCCGCCAAGAAGA...GTGCACAAACGTGGGTGTTGGTGTGGACGGGGCGCAGATCTCCGTGGATGAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp GCTGTGCTGTCCGGGGAAGACACCGTGCAAATGCCAAAGTGCACTGAGGAGAGGAGGATATCCAGCATCTaGTTCAGCCGCCAGGGAATG +
Preference number: 4 (lower is better)
Translates to: AVLSGEDTVQMPKCTEERRISSI*FSRQGM
Trigger: CATTCCCTGGCGGCTGAAGCAGATGCTGGATATCCT...CCTCTCCTCAGTGCACTTTGGCATTTGCACGGTGTCTTCCCCGGACAGCACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp TTGCTGTGCTGTCCGGGGAAGACACCGTGCAAATGCCAAAGTGCACTGAGGAGAGCGGCCGCCTGCTGCTaGTCTTCATACACCAGGATA +
Preference number: 4 (lower is better)
Translates to: LLCCPGKTPCKCQSALRRAAACC*SSYTRI
Trigger: TATCCTGGTGTATGAAGAGCAGCAGCAGGCGGCCGC...TCTCCTCAGTGCACTTTGGCATTTGCACGGTGTCTTCCCCGGACAGCACAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp GAACAGAGCCACGGTGTCCACGCAATCACACCATTTATTGCTGTGCTGTCCGGGTACAACTGGCAAAGGTaGCGGACGATCGCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: EQSHGVHAITPFIAVLSGYNWQR*RTIAGQ
Trigger: CTGCCCTGCGATCGTCCGGCACCTTTGCCAGTTGTA...CCCGGACAGCACAGCAATAAATGGTGTGATTGCGTGGACACCGTGGCTCTGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR GCA 90 bp TCCTGTTTCGTGTCACCTCTTGGCAACCTGTGCCTGGCTTCTAGAAGCGGCATGCAGCCAAGGCCTCCTTaGCAGGGAAGGAAGCCTCAT +
Preference number: 4 (lower is better)
Translates to: SCFVSPLGNLCLASRSGMQPRPP*QGRKPH
Trigger: ATGAGGCTTCCTTCCCTGGCAAGGAGGCCTTGGCTG...CATGCCGCTTCTAGAAGCCAGGCACAGGTTGCCAAGAGGTGACACGAAACAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR GCA 90 bp AAGAACAGAGCCACGGTGTCCACGCAATCACACCATTTATTGCTGTGCTGTCCGAGGCGACGCGGGAGCTaGACTCCTGGAACAGGCCAT +
Preference number: 4 (lower is better)
Translates to: KNRATVSTQSHHLLLCCPRRRGS*TPGTGH
Trigger: ATGGCCTGTTCCAGGAGTGCAGCTCCCGCGTCGCCT...CGGACAGCACAGCAATAAATGGTGTGATTGCGTGGACACCGTGGCTCTGTTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR GCA 90 bp ATTGCTGTGCTGTCCGGGGAAGACACCGTGCAAATGCCAAAGTGCACTGAGGAGAGGACCGAGGTCACCTaGAGGTTCAGGCTGTATGGC +
Preference number: 4 (lower is better)
Translates to: IAVLSGEDTVQMPKCTEERTEVT*RFRLYG
Trigger: GCCATACAGCCTGAACCTGCAGGTGACCTCGGTCCT...CTCCTCAGTGCACTTTGGCATTTGCACGGTGTCTTCCCCGGACAGCACAGCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp TCCGGGGAAGACACCGTGCAAATGCCAAAGTGCACTGAGGAGAGGGGAGGGTCTACCCTCTGGATTCTCTaGATCAAGTCCCCGATCACC +
Preference number: 4 (lower is better)
Translates to: SGEDTVQMPKCTEERGGSTLWIL*IKSPIT
Trigger: GGTGATCGGGGACTTGATGCAGAGAATCCAGAGGGT...AGACCCTCCCCTCTCCTCAGTGCACTTTGGCATTTGCACGGTGTCTTCCCCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp ATCACACCATTTATTGCTGTGCTGTCCGGGGAAGACACCGTGCAAATGCCAAAGCTCCCACCGCCCTGGTaGTGGCTCAGACCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: ITPFIAVLSGEDTVQMPKLPPPW*WLRPAL
Trigger: AAGGGCAGGTCTGAGCCAGCACCAGGGCGGTGGGAG...CTTTGGCATTTGCACGGTGTCTTCCCCGGACAGCACAGCAATAAATGGTGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp GTGCGGAACATGCTTTGGGCATTTGCCATGAGGCGGCTGGGAGTTTTGCAACAGAGGCCCCAAGGACCTTaGTGCCTGGAAAGCCATCTG +
Preference number: 4 (lower is better)
Translates to: VRNMLWAFAMRRLGVLQQRPQGP*CLESHL
Trigger: CAGATGGCTTTCCAGGCAGCAAGGTCCTTGGGGCCT...CTGTTGCAAAACTCCCAGCCGCCTCATGGCAAATGCCCAAAGCATGTTCCGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR GCA 90 bp AGTTCATCCACGGAGATCTGCGCCCCGTCCACACCAACACCCACGTTTGTGCACGACGATCCCATTCACTaGTCCTTCTCCATGGGCCAA +
Preference number: 4 (lower is better)
Translates to: SSSTEICAPSTPTPTFVHDDPIH*SFSMGQ
Trigger: TTGGCCCATGGAGAAGGAGCAGTGAATGGGATCGTC...GTGCACAAACGTGGGTGTTGGTGTGGACGGGGCGCAGATCTCCGTGGATGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR GCA 90 bp GTGCTGTCCGGGGAAGACACCGTGCAAATGCCAAAGTGCACTGAGGAGAGGGGACACCATTTATTGCTGTaGTGTCCGGGGAAGACACCG +
Preference number: 4 (lower is better)
Translates to: VLSGEDTVQMPKCTEERGHHLLL*CPGKTP
Trigger: CGGTGTCTTCCCCGGACAGCACAGCAATAAATGGTG...TCCCCTCTCCTCAGTGCACTTTGGCATTTGCACGGTGTCTTCCCCGGACAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp TGTCACCTCTTGGCAACCTGTGCCTGGCTTCTGGCTGTCACCCAAGCTCCTCCACACCATTTATTGCTGTaGTGTCCGGGGAAGACACCG +
Preference number: 4 (lower is better)
Translates to: CHLLATCAWLLAVTQAPPHHLLL*CPGKTP
Trigger: CGGTGTCTTCCCCGGACAGCACAGCAATAAATGGTG...TGGAGGAGCTTGGGTGACAGCCAGAAGCCAGGCACAGGTTGCCAAGAGGTGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450006.7
CDS-3UTR GCA 90 bp ACCTACAATCTTTTTACCTTCCAGGATGTAGGCGAGCAGCTCTGGGTCCTGCTGCCTGCAGCAGGTCAATaGTGGGCTCGCGCCTTCGTG +
Preference number: 4 (lower is better)
Translates to: TYNLFTFQDVGEQLWVLLPAAGQ*WARAFV
Trigger: CACGAAGGCGCGAGCCCAGCATTGACCTGCTGCAGG...CAGCAGGACCCAGAGCTGCTCGCCTACATCCTGGAAGGTAAAAAGATTGTAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427751.5
CDS-3UTR CCA 90 bp TCCACGGAGATCTGCGCCCCGTCCACACCAACACCCACGTTTGTGCACCCACATGAATGTCTGTCTTCTTaGCGGGGGTGCTTTCATCTG +
Preference number: 4 (lower is better)
Translates to: STEICAPSTPTPTFVHPHECLSS*RGCFHL
Trigger: CAGATGAAAGCACCCCCGCCAAGAAGACAGACATTC...ATGTGGGTGCACAAACGTGGGTGTTGGTGTGGACGGGGCGCAGATCTCCGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CCA 90 bp AGGGCAGTGGGTTCTCCGCATGCTTTCTTCCTACCTACAATCTTTTTACCTTCCCTGCTGCCGCATGCCTaGGGGGTACTCGGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: RAVGSPHAFFLPTIFLPSLLPHA*GVLGLA
Trigger: GGCAAGGCCGAGTACCCCCCAGGCATGCGGCAGCAG...GGAAGGTAAAAAGATTGTAGGTAGGAAGAAAGCATGCGGAGAACCCACTGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000427751.5
CDS-3UTR CCA 90 bp CTTAGGCAGGGCAGTGGGTTCTCCGCATGCTTTCTTCCTACCTACAATCTTTTTGACTCCCCGTCCAGCTaGGGCCTGGCAGGAGCACCA +
Preference number: 4 (lower is better)
Translates to: LRQGSGFSACFLPTYNLFDSPSS*GLAGAP
Trigger: TGGTGCTCCTGCCAGGCCCCAGCTGGACGGGGAGTC...AAAAAGATTGTAGGTAGGAAGAAAGCATGCGGAGAACCCACTGCCCTGCCTAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427751.5
CDS-3UTR CCA 90 bp GAAGACACCGTGCAAATGCCAAAGTGCACTGAGGAGAGGGGAGGGTCTGTGACTCGACTCTTCTTGCTCTaGCACAGCCCAAGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: EDTVQMPKCTEERGGSVTRLFLL*HSPSRE
Trigger: CTCCCTGCTTGGGCTGTGCCAGAGCAAGAAGAGTCG...AGTCACAGACCCTCCCCTCTCCTCAGTGCACTTTGGCATTTGCACGGTGTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CCA 90 bp TCCTCCTGTTTCGTGTCACCTCTTGGCAACCTGTGCCTGGCTTCTGGCTGTCACATGGACCGGTACAACTaGCAAAGGTGCCGGACGATC +
Preference number: 4 (lower is better)
Translates to: SSCFVSPLGNLCLASGCHMDRYN*QRCRTI
Trigger: GATCGTCCGGCACCTTTGCCAGTTGTACCGGTCCAT...GTGACAGCCAGAAGCCAGGCACAGGTTGCCAAGAGGTGACACGAAACAGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450006.7
CDS-3UTR CCA 90 bp ACCCAAGCTCCTCCAAGAAGGCCCCAAGGACCTTGCTGCCTGGAAAGCCATCTGCCAGGAAGACAGGCATaGACCGGTACAACTGGCAAA +
Preference number: 4 (lower is better)
Translates to: TQAPPRRPQGPCCLESHLPGRQA*TGTTGK
Trigger: TTTGCCAGTTGTACCGGTCCATGCCTGTCTTCCTGG...CAGATGGCTTTCCAGGCAGCAAGGTCCTTGGGGCCTTCTTGGAGGAGCTTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CCA 90 bp ATCACACCATTTATTGCTGTGCTGTCCGGGGAAGACACCGTGCAAATGCCAAAGCGCAGGACCAGGCTGTaGATGATCCCCTCGTGGGGC +
Preference number: 4 (lower is better)
Translates to: ITPFIAVLSGEDTVQMPKRRTRL*MIPSWG
Trigger: GCCCCACGAGGGGATCATCCACAGCCTGGTCCTGCG...CTTTGGCATTTGCACGGTGTCTTCCCCGGACAGCACAGCAATAAATGGTGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CCA 90 bp TTGCTGTGCTGTCCGGGGAAGACACCGTGCAAATGCCAAAGTGCACTGAGGAGAAGCACTCGGAGGAAGTaGCCCTCGAAGAAAGGTCGC +
Preference number: 4 (lower is better)
Translates to: LLCCPGKTPCKCQSALRRSTRRK*PSKKGR
Trigger: GCGACCTTTCTTCGAGGGCCACTTCCTCCGAGTGCT...TCTCCTCAGTGCACTTTGGCATTTGCACGGTGTCTTCCCCGGACAGCACAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CCA 90 bp AGAGTCCAGACGCAGTTCATCCACGGAGATCTGCGCCCCGTCCACACCAACACCAACTGGGGTACCCTCTaGATTCTCTGCATCAAGTCC +
Preference number: 4 (lower is better)
Translates to: RVQTQFIHGDLRPVHTNTNWGTL*ILCIKS
Trigger: GGACTTGATGCAGAGAATCCAGAGGGTACCCCAGTT...GGTGTTGGTGTGGACGGGGCGCAGATCTCCGTGGATGAACTGCGTCTGGACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CCA 90 bp CCTTGCTGCCTGGAAAGCCATCTGTTTGGCTCCTTGGCACCTGGCATGCCCATTCTGGCGAGGATCATGTaGGGGAAACTTGACGAAGGC +
Preference number: 4 (lower is better)
Translates to: PCCLESHLFGSLAPGMPILARIM*GKLDEG
Trigger: GCCTTCGTCAAGTTTCCCCCACATGATCCTCGCCAG...AATGGGCATGCCAGGTGCCAAGGAGCCAAACAGATGGCTTTCCAGGCAGCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CCA 90 bp CCAAATGAGACTTGCACACAGATGCTCCCACGTGGTCCATTCCCTCATGGTGTCGCTGGGGAGACGTTCTaGCGAGGATCATGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: PNETCTQMLPRGPFPHGVAGETF*RGSCGG
Trigger: TCCCCCACATGATCCTCGCCAGAACGTCTCCCCAGC...GACACCATGAGGGAATGGACCACGTGGGAGCATCTGTGTGCAAGTCTCATTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR CCA 90 bp GTGCTGTCCGGGGAAGACACCGTGCAAATGCCAAAGTGCACTGAGGAGAGGGGAAAACCCAGTCTGGTGTaGTCAACATGCCGCAGTCTC +
Preference number: 4 (lower is better)
Translates to: VLSGEDTVQMPKCTEERGKPSLV*STCRSL
Trigger: GAGACTGCGGCATGTTGACCACACCAGACTGGGTTT...TCCCCTCTCCTCAGTGCACTTTGGCATTTGCACGGTGTCTTCCCCGGACAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CCA 90 bp TCCTCCTGTTTCGTGTCACCTCTTGGCAACCTGTGCCTGGCTTCTAGAAGCGGCTGGCTCCTTGGCACCTaGCATGCCCATTCCCTGAAA +
Preference number: 4 (lower is better)
Translates to: SSCFVSPLGNLCLASRSGWLLGT*HAHSLK
Trigger: TTTCAGGGAATGGGCATGCCAGGTGCCAAGGAGCCA...GCCGCTTCTAGAAGCCAGGCACAGGTTGCCAAGAGGTGACACGAAACAGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR CCA 90 bp TGTCACCTCTTGGCAACCTGTGCCTGGCTTCTGGCTGTCACCCAAGCTCCTCCAATCTGTTTGGCTCCTTaGCACCTGGCATGCCCATTC +
Preference number: 4 (lower is better)
Translates to: CHLLATCAWLLAVTQAPPICLAP*HLACPF
Trigger: GAATGGGCATGCCAGGTGCCAAGGAGCCAAACAGAT...TGGAGGAGCTTGGGTGACAGCCAGAAGCCAGGCACAGGTTGCCAAGAGGTGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450006.7
CDS-3UTR CCA 90 bp TCTGGCCTGCTCCTCCTTGCCCAGGAGCAAAGCCAGCAACTGTGTAGTCCCGCTAAGGACCTTGCTGCCTaGAAAGCCATCTGTTTGGCT +
Preference number: 4 (lower is better)
Translates to: SGLLLLAQEQSQQLCSPAKDLAA*KAICLA
Trigger: AGCCAAACAGATGGCTTTCCAGGCAGCAAGGTCCTT...AGCGGGACTACACAGTTGCTGGCTTTGCTCCTGGGCAAGGAGGAGCAGGCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR CCA 90 bp GGCAGAAGGTGGGGAAACTTGGCCAAGAACAGAGCCACGGTGTCCACGCAATCACCTTGGGGAGGAAGATaGGCCCGAATTAGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: GRRWGNLAKNRATVSTQSPWGGR*ARISSG
Trigger: TCCACTGCTAATTCGGGCCCATCTTCCTCCCCAAGG...TGATTGCGTGGACACCGTGGCTCTGTTCTTGGCCAAGTTTCCCCACCTTCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR TCA 90 bp GTCCACGCAATCACACCATTTATTGCTGTGCTGTCCGGGGAAGACACCGTGCAACAATGCCCGATGAGATaGGCATACAGGGTGTGGGGG +
Preference number: 4 (lower is better)
Translates to: VHAITPFIAVLSGEDTVQQCPMR*AYRVWG
Trigger: CCCCCACACCCTGTATGCTCATCTCATCGGGCATTG...TTGCACGGTGTCTTCCCCGGACAGCACAGCAATAAATGGTGTGATTGCGTGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp CAGTTCATCCACGGAGATCTGCGCCCCGTCCACACCAACACCCACGTTTGTGCAGGGTGCTTTCATCTGTaGTCTCGATGTAGTAGTGCG +
Preference number: 4 (lower is better)
Translates to: QFIHGDLRPVHTNTHVCAGCFHL*SRCSSA
Trigger: CGCACTACTACATCGAGAGCACAGATGAAAGCACCC...TGCACAAACGTGGGTGTTGGTGTGGACGGGGCGCAGATCTCCGTGGATGAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp TCTGTAACGGATCCGGAAGCAGTCCCACCAAGTCGGAGGAGTTTCTGCACAGGCTCTTCTTGGCGGGGGTaGTTTCATCTGTGCTCTCGA +
Preference number: 4 (lower is better)
Translates to: SVTDPEAVPPSRRSFCTGSSWRG*FHLCSR
Trigger: TCGAGAGCACAGATGAAAGCACCCCCGCCAAGAAGA...GCCTGTGCAGAAACTCCTCCGACTTGGTGGGACTGCTTCCGGATCCGTTACAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427751.5
CDS-3UTR GCA 90 bp CCTTGCTGCCTGGAAAGCCATCTGTTTGGCTCCTTGGCACCTGGCATGCCCATTTCTTCTTGGCGGGGGTaGTTTCATCTGTGCTCTCGA +
Preference number: 4 (lower is better)
Translates to: PCCLESHLFGSLAPGMPISSWRG*FHLCSR
Trigger: TCGAGAGCACAGATGAAAGCACCCCCGCCAAGAAGA...AATGGGCATGCCAGGTGCCAAGGAGCCAAACAGATGGCTTTCCAGGCAGCAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp GAAGACACCGTGCAAATGCCAAAGTGCACTGAGGAGAGGGGAGGGTCTGTGACTGTCTCCAGGATCTTGTaGTGCAGCAGGTACTCCAGG +
Preference number: 4 (lower is better)
Translates to: EDTVQMPKCTEERGGSVTVSRIL*CSRYSR
Trigger: CCTGGAGTACCTGCTGCAGCACAAGATCCTGGAGAC...AGTCACAGACCCTCCCCTCTCCTCAGTGCACTTTGGCATTTGCACGGTGTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp GTCCACGCAATCACACCATTTATTGCTGTGCTGTCCGGGGAAGACACCGTGCAAAGCAGCTCTGGGTCCTaGTGGATCTTGGAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: VHAITPFIAVLSGEDTVQSSSGS*WILEQR
Trigger: CCTCTGCTCCAAGATCCAGCAGGACCCAGAGCTGCT...TTGCACGGTGTCTTCCCCGGACAGCACAGCAATAAATGGTGTGATTGCGTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp TATGAATCTAAGAGTCCAGACGCAGTTCATCCACGGAGATCTGCGCCCCGTCCACAGCCAAGGCCTCCTTaGCAGGGAAGGAAGCCTCAT +
Preference number: 4 (lower is better)
Translates to: YESKSPDAVHPRRSAPRPQPRPP*QGRKPH
Trigger: ATGAGGCTTCCTTCCCTGGCAAGGAGGCCTTGGCTG...TGGACGGGGCGCAGATCTCCGTGGATGAACTGCGTCTGGACTCTTAGATTCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp GTCCACGCAATCACACCATTTATTGCTGTGCTGTCCGGGGAAGACACCGTGCAACGCAACCACCGTGTGTaGCTCTGTGATGAGGTGGTC +
Preference number: 4 (lower is better)
Translates to: VHAITPFIAVLSGEDTVQRNHRV*LCDEVV
Trigger: GACCACCTCATCACAGAGGCACACACGGTGGTTGCG...TTGCACGGTGTCTTCCCCGGACAGCACAGCAATAAATGGTGTGATTGCGTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp ATGCCAAAGTGCACTGAGGAGAGGGGAGGGTCTGTGACTCCCAAACCCTCGAATCCAGAATCCGGGACATaGGGTCAAACAGCACTCGGA +
Preference number: 4 (lower is better)
Translates to: MPKCTEERGGSVTPKPSNPESGT*GQTALG
Trigger: TCCGAGTGCTGTTTGACCGCATGTCCCGGATTCTGG...ATTCGAGGGTTTGGGAGTCACAGACCCTCCCCTCTCCTCAGTGCACTTTGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp CCTTGGCACCTGGCATGCCCATTCCCTGAAACCCAGTCTGGTGTGGTCAACATGACCCTCTGGATTCTCTaGATCAAGTCCCCGATCACC +
Preference number: 4 (lower is better)
Translates to: PWHLACPFPETQSGVVNMTLWIL*IKSPIT
Trigger: GGTGATCGGGGACTTGATGCAGAGAATCCAGAGGGT...CATGTTGACCACACCAGACTGGGTTTCAGGGAATGGGCATGCCAGGTGCCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp GTCCACGCAATCACACCATTTATTGCTGTGCTGTCCGGGGAAGACACCGTGCAACCTTGGCACCTGGCATaGCCATTCCCTGAAACCCAG +
Preference number: 4 (lower is better)
Translates to: VHAITPFIAVLSGEDTVQPWHLA*PFPETQ
Trigger: CTGGGTTTCAGGGAATGGGCATGCCAGGTGCCAAGG...TTGCACGGTGTCTTCCCCGGACAGCACAGCAATAAATGGTGTGATTGCGTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp AGTTCATCCACGGAGATCTGCGCCCCGTCCACACCAACACCCACGTTTGTGCACTCAGCAGATCTGCACTaGCAGAGCCTGTCTGTTTAC +
Preference number: 4 (lower is better)
Translates to: SSSTEICAPSTPTPTFVHSADLH*QSLSVY
Trigger: GTAAACAGACAGGCTCTGGCAGTGCAGATCTGCTGA...GTGCACAAACGTGGGTGTTGGTGTGGACGGGGCGCAGATCTCCGTGGATGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR CCA 90 bp TACCTTCCAGGATGTAGGCGAGCAGCTCTGGGTCCTGCTGGATCTTGGAGCAGAACCTTGCTGAAGAACTaGAACACCTGCTGCCGCATG +
Preference number: 4 (lower is better)
Translates to: YLPGCRRAALGPAGSWSRTLLKN*NTCCRM
Trigger: CATGCGGCAGCAGGTGTTCCAGTTCTTCAGCAAGGT...TCTGCTCCAAGATCCAGCAGGACCCAGAGCTGCTCGCCTACATCCTGGAAGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427751.5
CDS-3UTR CCA 90 bp CCTTGCTGCCTGGAAAGCCATCTGTTTGGCTCCTTGGCACCTGGCATGCCCATTACCTTGCTGAAGAACTaGAACACCTGCTGCCGCATG +
Preference number: 4 (lower is better)
Translates to: PCCLESHLFGSLAPGMPITLLKN*NTCCRM
Trigger: CATGCGGCAGCAGGTGTTCCAGTTCTTCAGCAAGGT...AATGGGCATGCCAGGTGCCAAGGAGCCAAACAGATGGCTTTCCAGGCAGCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CCA 90 bp AATGTCTGTCTTCTTGGCGGGGGTGCTTTCATCTGTGCTCTCGATGTAGTAGTGGCAGGAGCACCATCGTaGGAGCAGTCCTTGTCCCCG +
Preference number: 4 (lower is better)
Translates to: NVCLLGGGAFICALDVVVAGAPS*EQSLSP
Trigger: CGGGGACAAGGACTGCTCCCACGATGGTGCTCCTGC...CACTACTACATCGAGAGCACAGATGAAAGCACCCCCGCCAAGAAGACAGACATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427751.5
CDS-3UTR CCA 90 bp AGGGCAGTGGGTTCTCCGCATGCTTTCTTCCTACCTACAATCTTTTTACCTTCCTGGCTGTTCAAGGCCTaGGCCCCACAGGACTCCCCG +
Preference number: 4 (lower is better)
Translates to: RAVGSPHAFFLPTIFLPSWLFKA*APQDSP
Trigger: CGGGGAGTCCTGTGGGGCCCAGGCCTTGAACAGCCA...GGAAGGTAAAAAGATTGTAGGTAGGAAGAAAGCATGCGGAGAACCCACTGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000427751.5
CDS-3UTR CCA 90 bp GAAGACACCGTGCAAATGCCAAAGTGCACTGAGGAGAGGGGAGGGTCTGTGACTCTGGCGAGGATCATGTaGGGGAAACTTGACGAAGGC +
Preference number: 4 (lower is better)
Translates to: EDTVQMPKCTEERGGSVTLARIM*GKLDEG
Trigger: GCCTTCGTCAAGTTTCCCCCACATGATCCTCGCCAG...AGTCACAGACCCTCCCCTCTCCTCAGTGCACTTTGGCATTTGCACGGTGTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CCA 90 bp CACGCAATCACACCATTTATTGCTGTGCTGTCCGGGGAAGACACCGTGCAAATGGCTGGGGAGACGTTCTaGCGAGGATCATGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: HAITPFIAVLSGEDTVQMAGETF*RGSCGG
Trigger: TCCCCCACATGATCCTCGCCAGAACGTCTCCCCAGC...CATTTGCACGGTGTCTTCCCCGGACAGCACAGCAATAAATGGTGTGATTGCGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CCA 90 bp AAGCTCCTCCAAGAAGGCCCCAAGGACCTTGCTGCCTGGAAAGCCATCTGTTTGTGGCTCCTTGGCACCTaGCATGCCCATTCCCTGAAA +
Preference number: 4 (lower is better)
Translates to: KLLQEGPKDLAAWKAICLWLLGT*HAHSLK
Trigger: TTTCAGGGAATGGGCATGCCAGGTGCCAAGGAGCCA...CAAACAGATGGCTTTCCAGGCAGCAAGGTCCTTGGGGCCTTCTTGGAGGAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CCA 90 bp ATTGCTGTGCTGTCCGGGGAAGACACCGTGCAAATGCCAAAGTGCACTGAGGAGTTGGCAACCTGTGCCTaGCTTCTGGCTGTCACCCAA +
Preference number: 4 (lower is better)
Translates to: IAVLSGEDTVQMPKCTEELATCA*LLAVTQ
Trigger: TTGGGTGACAGCCAGAAGCCAGGCACAGGTTGCCAA...CTCCTCAGTGCACTTTGGCATTTGCACGGTGTCTTCCCCGGACAGCACAGCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450006.7
3UTR CAA 72 bp GAGGTCACTGAGTTTCCTCCTGTTTCGTGTCACCTCTaGGCAACCTGTGCCTGGCTTCTAGAAGCGGCATGG +
Preference number: 4 (lower is better)
Translates to: EVTEFPPVSCHL*ATCAWLLEAAW
Trigger: CCATGCCGCTTCTAGAAGCCAGGCACAGGTTGCCAAGAGGTGACACGAAACAGGAGGAAACTCAGTGACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR CAA 72 bp GAGGTCACTGAGTTTCCTCCTGTTTCGTGTCACCTCTaGGCAACCTGTGCCTGGCTTCTGGCTGTCACCCAA +
Preference number: 4 (lower is better)
Translates to: EVTEFPPVSCHL*ATCAWLLAVTQ
Trigger: TTGGGTGACAGCCAGAAGCCAGGCACAGGTTGCCAAGAGGTGACACGAAACAGGAGGAAACTCAGTGACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450006.7
CDS-3UTR TCA 90 bp GCGGAACATGCTTTGGGCATTTGCCATGAGGCGGCTGGGAGTTTTGCAACAGTTTGGGTAACCTCCAGCTaGTGCCCTCTAAGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: AEHALGICHEAAGSFATVWVTSS*CPLRWQ
Trigger: TTGCCACCTTAGAGGGCATCAGCTGGAGGTTACCCA...AACTGTTGCAAAACTCCCAGCCGCCTCATGGCAAATGCCCAAAGCATGTTCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR TCA 90 bp CGCAATCACACCATTTATTGCTGTGCTGTCCGGGGAAGACACCGTGCAAATGCCAGAGGGGAGGGTCTGTaGCTCCCAAACCCTCGAATA +
Preference number: 4 (lower is better)
Translates to: RNHTIYCCAVRGRHRANARGEGL*LPNPRI
Trigger: TATTCGAGGGTTTGGGAGTCACAGACCCTCCCCTCT...GGCATTTGCACGGTGTCTTCCCCGGACAGCACAGCAATAAATGGTGTGATTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp AGGGCAGTGGGTTCTCCGCATGCTTTCTTCCTACCTACAATCTTTTTACCTTCCGGGGGTACTCGGCCTTaGCCAGCGTGCAGAGAGTCT +
Preference number: 4 (lower is better)
Translates to: RAVGSPHAFFLPTIFLPSGGTRP*PACRES
Trigger: AGACTCTCTGCACGCTGGGCAAGGCCGAGTACCCCC...GGAAGGTAAAAAGATTGTAGGTAGGAAGAAAGCATGCGGAGAACCCACTGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000427751.5
CDS-3UTR GCA 90 bp TCTGTAACGGATCCGGAAGCAGTCCCACCAAGTCGGAGGAGTTTCTGCACAGGCAGGACGGTGGTGAACTaGACCTCCTCCTTTTCTGTA +
Preference number: 4 (lower is better)
Translates to: SVTDPEAVPPSRRSFCTGRTVVN*TSSFSV
Trigger: TACAGAAAAGGAGGAGGTGCAGTTCACCACCGTCCT...GCCTGTGCAGAAACTCCTCCGACTTGGTGGGACTGCTTCCGGATCCGTTACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427751.5
CDS-3UTR GCA 90 bp GTCCACGCAATCACACCATTTATTGCTGTGCTGTCCGGGGAAGACACCGTGCAACAACACCCACGTTTGTaGACCCACATGTGCACGGTG +
Preference number: 4 (lower is better)
Translates to: VHAITPFIAVLSGEDTVQQHPRL*THMCTV
Trigger: CACCGTGCACATGTGGGTGCACAAACGTGGGTGTTG...TTGCACGGTGTCTTCCCCGGACAGCACAGCAATAAATGGTGTGATTGCGTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp AGACGCAGTTCATCCACGGAGATCTGCGCCCCGTCCACACCAACACCCACGTTTAAGACACCGTGCAAATaGCAAAGTGCACTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: RRSSSTEICAPSTPTPTFKTPCK*QSALRR
Trigger: TCTCCTCAGTGCACTTTGGCATTTGCACGGTGTCTT...AAACGTGGGTGTTGGTGTGGACGGGGCGCAGATCTCCGTGGATGAACTGCGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp TATGAATCTAAGAGTCCAGACGCAGTTCATCCACGGAGATCTGCGCCCCGTCCACCGGGGAAGACACCGTaGAAATGCCAAAGTGCACTG +
Preference number: 4 (lower is better)
Translates to: YESKSPDAVHPRRSAPRPPGKTP*KCQSAL
Trigger: CAGTGCACTTTGGCATTTGCACGGTGTCTTCCCCGG...TGGACGGGGCGCAGATCTCCGTGGATGAACTGCGTCTGGACTCTTAGATTCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp CACGCAATCACACCATTTATTGCTGTGCTGTCCGGGGAAGACACCGTGCAAATGCCTCTTGGCAACCTGTaGCTGGCTTCTGGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: HAITPFIAVLSGEDTVQMPLGNL*LASGCH
Trigger: GTGACAGCCAGAAGCCAGGCACAGGTTGCCAAGAGG...CATTTGCACGGTGTCTTCCCCGGACAGCACAGCAATAAATGGTGTGATTGCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450006.7
CDS-3UTR CCA 90 bp TCCTGTTTCGTGTCACCTCTTGGCAACCTGTGCCTGGCTTCTAGAAGCGGCATGACCTTGCTGAAGAACTaGAACACCTGCTGCCGCATG +
Preference number: 4 (lower is better)
Translates to: SCFVSPLGNLCLASRSGMTLLKN*NTCCRM
Trigger: CATGCGGCAGCAGGTGTTCCAGTTCTTCAGCAAGGT...CATGCCGCTTCTAGAAGCCAGGCACAGGTTGCCAAGAGGTGACACGAAACAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR CCA 90 bp GAAGACACCGTGCAAATGCCAAAGTGCACTGAGGAGAGGGGAGGGTCTGTGACTCCAGGAAGACAGGCATaGACCGGTACAACTGGCAAA +
Preference number: 4 (lower is better)
Translates to: EDTVQMPKCTEERGGSVTPGRQA*TGTTGK
Trigger: TTTGCCAGTTGTACCGGTCCATGCCTGTCTTCCTGG...AGTCACAGACCCTCCCCTCTCCTCAGTGCACTTTGGCATTTGCACGGTGTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CCA 90 bp GTGCGGAACATGCTTTGGGCATTTGCCATGAGGCGGCTGGGAGTTTTGCAACAGGGAAAGCCATCTGTTTaGCTCCTTGGCACCTGGCAT +
Preference number: 4 (lower is better)
Translates to: VRNMLWAFAMRRLGVLQQGKPSV*LLGTWH
Trigger: ATGCCAGGTGCCAAGGAGCCAAACAGATGGCTTTCC...CTGTTGCAAAACTCCCAGCCGCCTCATGGCAAATGCCCAAAGCATGTTCCGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289921.8
3UTR CAA 72 bp AACAGAGCCACGGTGTCCACGCAATCACACCATTTATaGCTGTGCTGTCCGGGGAAGACACCGTGCAAATGC +
Preference number: 4 (lower is better)
Translates to: NRATVSTQSHHL*LCCPGKTPCKC
Trigger: GCATTTGCACGGTGTCTTCCCCGGACAGCACAGCAATAAATGGTGTGATTGCGTGGACACCGTGGCTCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR TCA 90 bp ACCTACAATCTTTTTACCTTCCAGGATGTAGGCGAGCAGCTCTGGGTCCTGCTGGCGCCAGAACCTTGCTaGAGAACTGGAACACCTGCT +
Preference number: 4 (lower is better)
Translates to: TYNLFTFQDVGEQLWVLLAPEPC*RTGTPA
Trigger: AGCAGGTGTTCCAGTTCTTCAGCAAGGTTCTGGCGC...CAGCAGGACCCAGAGCTGCTCGCCTACATCCTGGAAGGTAAAAAGATTGTAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427751.5
CDS-3UTR TCA 90 bp CACGCAATCACACCATTTATTGCTGTGCTGTCCGGGGAAGACACCGTGCAAATGTGGGTAACCTCCAGCTaGTGCCCTCTAAGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: HAITPFIAVLSGEDTVQMWVTSS*CPLRWQ
Trigger: TTGCCACCTTAGAGGGCATCAGCTGGAGGTTACCCA...CATTTGCACGGTGTCTTCCCCGGACAGCACAGCAATAAATGGTGTGATTGCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR TCA 90 bp GCAATCACACCATTTATTGCTGTGCTGTCCGGGGAAGACACCGTGCAAATGCCATTTGGGCATTTGCCATaGGGCGGCTGGGAGTTTTGC +
Preference number: 4 (lower is better)
Translates to: AITPFIAVLSGEDTVQMPFGHLP*GGWEFC
Trigger: GCAAAACTCCCAGCCGCCTCATGGCAAATGCCCAAA...TGGCATTTGCACGGTGTCTTCCCCGGACAGCACAGCAATAAATGGTGTGATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR TCA 90 bp GTTTCCTCCTGTTTCGTGTCACCTCTTGGCAACCTGTGCCTGGCTTCTAGAAGCAGAGGCAGAGGTCACTaGGTTTCCTCCTGTTTCGTG +
Preference number: 4 (lower is better)
Translates to: VSSCFVSPLGNLCLASRSRGRGH*VSSCFV
Trigger: CACGAAACAGGAGGAAACTCAGTGACCTCTGCCTCT...GCTTCTAGAAGCCAGGCACAGGTTGCCAAGAGGTGACACGAAACAGGAGGAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR GCA 90 bp GCAATCACACCATTTATTGCTGTGCTGTCCGGGGAAGACACCGTGCAAATGCCATCCAGGATCTTGTGCTaGAGCAGGTACTCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: AITPFIAVLSGEDTVQMPSRILC*SRYSRQ
Trigger: CTGCCTGGAGTACCTGCTGCAGCACAAGATCCTGGA...TGGCATTTGCACGGTGTCTTCCCCGGACAGCACAGCAATAAATGGTGTGATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp GTCCACGCAATCACACCATTTATTGCTGTGCTGTCCGGGGAAGACACCGTGCAACCCCAAGGACCTTGCTaGCTGGAAAGCCATCTGTTT +
Preference number: 4 (lower is better)
Translates to: VHAITPFIAVLSGEDTVQPQGPC*LESHLF
Trigger: AAACAGATGGCTTTCCAGGCAGCAAGGTCCTTGGGG...TTGCACGGTGTCTTCCCCGGACAGCACAGCAATAAATGGTGTGATTGCGTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp CTGGCATGCCCATTCCCTGAAACCCAGTCTGGTGTGGTCAACATGCCGCAGTCTAAGACACCGTGCAAATaGCAAAGTGCACTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: LACPFPETQSGVVNMPQSKTPCK*QSALRR
Trigger: TCTCCTCAGTGCACTTTGGCATTTGCACGGTGTCTT...AGACTGCGGCATGTTGACCACACCAGACTGGGTTTCAGGGAATGGGCATGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp TCCGGGGAAGACACCGTGCAAATGCCAAAGTGCACTGAGGAGAGGGGAGGGTCTAATCACACCATTTATTaGTGTGCTGTCCGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: SGEDTVQMPKCTEERGGSNHTIY*CAVRGR
Trigger: TCTTCCCCGGACAGCACAGCAATAAATGGTGTGATT...AGACCCTCCCCTCTCCTCAGTGCACTTTGGCATTTGCACGGTGTCTTCCCCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CCA 90 bp GAACAGAGCCACGGTGTCCACGCAATCACACCATTTATTGCTGTGCTGTCCGGGGAATGTCTGTCTTCTTaGCGGGGGTGCTTTCATCTG +
Preference number: 4 (lower is better)
Translates to: EQSHGVHAITPFIAVLSGECLSS*RGCFHL
Trigger: CAGATGAAAGCACCCCCGCCAAGAAGACAGACATTC...CCCGGACAGCACAGCAATAAATGGTGTGATTGCGTGGACACCGTGGCTCTGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR CCA 90 bp GAGCAGAGGACGGTGGTGAACTGCACCTCCTCCTTTTCTGTAACGGATCCGGAAGAATGTCTGTCTTCTTaGCGGGGGTGCTTTCATCTG +
Preference number: 4 (lower is better)
Translates to: EQRTVVNCTSSFSVTDPEECLSS*RGCFHL
Trigger: CAGATGAAAGCACCCCCGCCAAGAAGACAGACATTC...TTCCGGATCCGTTACAGAAAAGGAGGAGGTGCAGTTCACCACCGTCCTCTGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427751.5
CDS-3UTR CCA 90 bp GTCCACGCAATCACACCATTTATTGCTGTGCTGTCCGGGGAAGACACCGTGCAAAAACCCAGTCTGGTGTaGTCAACATGCCGCAGTCTC +
Preference number: 4 (lower is better)
Translates to: VHAITPFIAVLSGEDTVQKPSLV*STCRSL
Trigger: GAGACTGCGGCATGTTGACCACACCAGACTGGGTTT...TTGCACGGTGTCTTCCCCGGACAGCACAGCAATAAATGGTGTGATTGCGTGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CCA 90 bp CGCAATCACACCATTTATTGCTGTGCTGTCCGGGGAAGACACCGTGCAAATGCCGGAAAGCCATCTGTTTaGCTCCTTGGCACCTGGCAT +
Preference number: 4 (lower is better)
Translates to: RNHTIYCCAVRGRHRANAGKPSV*LLGTWH
Trigger: ATGCCAGGTGCCAAGGAGCCAAACAGATGGCTTTCC...GGCATTTGCACGGTGTCTTCCCCGGACAGCACAGCAATAAATGGTGTGATTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CCA 90 bp TTGCTGTGCTGTCCGGGGAAGACACCGTGCAAATGCCAAAGTGCACTGAGGAGAAAGGACCTTGCTGCCTaGAAAGCCATCTGTTTGGCT +
Preference number: 4 (lower is better)
Translates to: LLCCPGKTPCKCQSALRRKDLAA*KAICLA
Trigger: AGCCAAACAGATGGCTTTCCAGGCAGCAAGGTCCTT...TCTCCTCAGTGCACTTTGGCATTTGCACGGTGTCTTCCCCGGACAGCACAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CCA 90 bp GTCCACGCAATCACACCATTTATTGCTGTGCTGTCCGGGGAAGACACCGTGCAATTTCGTGTCACCTCTTaGCAACCTGTGCCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: VHAITPFIAVLSGEDTVQFRVTS*QPVPGF
Trigger: GAAGCCAGGCACAGGTTGCCAAGAGGTGACACGAAA...TTGCACGGTGTCTTCCCCGGACAGCACAGCAATAAATGGTGTGATTGCGTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CCA 90 bp GTGCGGAACATGCTTTGGGCATTTGCCATGAGGCGGCTGGGAGTTTTGCAACAGAGAATTTGTCTTCCTTaGGGAGGAAGATGGGCCCGA +
Preference number: 4 (lower is better)
Translates to: VRNMLWAFAMRRLGVLQQRICLP*GGRWAR
Trigger: TCGGGCCCATCTTCCTCCCCAAGGAAGACAAATTCT...CTGTTGCAAAACTCCCAGCCGCCTCATGGCAAATGCCCAAAGCATGTTCCGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR GCA 90 bp GTCCACGCAATCACACCATTTATTGCTGTGCTGTCCGGGGAAGACACCGTGCAAAGGACGGTGGTGAACTaGACCTCCTCCTTTTCTGTA +
Preference number: 4 (lower is better)
Translates to: VHAITPFIAVLSGEDTVQRTVVN*TSSFSV
Trigger: TACAGAAAAGGAGGAGGTGCAGTTCACCACCGTCCT...TTGCACGGTGTCTTCCCCGGACAGCACAGCAATAAATGGTGTGATTGCGTGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp AGGGCAGTGGGTTCTCCGCATGCTTTCTTCCTACCTACAATCTTTTTACCTTCCAGCAGCTCTGGGTCCTaGTGGATCTTGGAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: RAVGSPHAFFLPTIFLPSSSSGS*WILEQR
Trigger: CCTCTGCTCCAAGATCCAGCAGGACCCAGAGCTGCT...GGAAGGTAAAAAGATTGTAGGTAGGAAGAAAGCATGCGGAGAACCCACTGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427751.5
CDS-3UTR GCA 90 bp TCCTCCTGTTTCGTGTCACCTCTTGGCAACCTGTGCCTGGCTTCTGGCTGTCACAGTGGGTTCTCCGCATaGTTTCTTCCTACCTACAAT +
Preference number: 4 (lower is better)
Translates to: SSCFVSPLGNLCLASGCHSGFSA*FLPTYN
Trigger: ATTGTAGGTAGGAAGAAAGCATGCGGAGAACCCACT...GTGACAGCCAGAAGCCAGGCACAGGTTGCCAAGAGGTGACACGAAACAGGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450006.7
CDS-3UTR GCA 90 bp TGTGACTCCCAAACCCTCGAATATTTTATGAATCTAAGAGTCCAGACGCAGTTCCTCCCACCGCCCTGGTaGTGGCTCAGACCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: CDSQTLEYFMNLRVQTQFLPPPW*WLRPAL
Trigger: AAGGGCAGGTCTGAGCCAGCACCAGGGCGGTGGGAG...GAACTGCGTCTGGACTCTTAGATTCATAAAATATTCGAGGGTTTGGGAGTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp CCATTTATTGCTGTGCTGTCCGGGGAAGACACCGTGCAAATGCCAAAGTGCACTAGACTTGCACACAGATaGTCCCACGTGGTCCATTCC +
Preference number: 4 (lower is better)
Translates to: PFIAVLSGEDTVQMPKCTRLAHR*SHVVHS
Trigger: GGAATGGACCACGTGGGAGCATCTGTGTGCAAGTCT...AGTGCACTTTGGCATTTGCACGGTGTCTTCCCCGGACAGCACAGCAATAAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR TCA 90 bp TCCGGGGAAGACACCGTGCAAATGCCAAAGTGCACTGAGGAGAGGGGAGGGTCTATCAGGCCTACTTTATaGCTAAAACAGGCATACAAC +
Preference number: 4 (lower is better)
Translates to: SGEDTVQMPKCTEERGGSIRPTL*LKQAYN
Trigger: GTTGTATGCCTGTTTTAGTCATAAAGTAGGCCTGAT...AGACCCTCCCCTCTCCTCAGTGCACTTTGGCATTTGCACGGTGTCTTCCCCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR CCA 90 bp ATTGCTGTGCTGTCCGGGGAAGACACCGTGCAAATGCCAAAGTGCACTGAGGAGCTTCTAGAAGCGGCATaGGCAAGAAAAGGAAGCAAA +
Preference number: 4 (lower is better)
Translates to: IAVLSGEDTVQMPKCTEELLEAA*ARKGSK
Trigger: TTTGCTTCCTTTTCTTGCCCATGCCGCTTCTAGAAG...CTCCTCAGTGCACTTTGGCATTTGCACGGTGTCTTCCCCGGACAGCACAGCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR GCA 90 bp GCAGGGCAGTGGGTTCTCCGCATGCTTTCTTCCTACCTACAATCTTTTTACCTTAGGATATCCAGCATCTaGTTCAGCCGCCAGGGAATG +
Preference number: 4 (lower is better)
Translates to: AGQWVLRMLSSYLQSFYLRISSI*FSRQGM
Trigger: CATTCCCTGGCGGCTGAAGCAGATGCTGGATATCCT...AAGGTAAAAAGATTGTAGGTAGGAAGAAAGCATGCGGAGAACCCACTGCCCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427751.5
CDS-3UTR GCA 90 bp CCAAATGAGACTTGCACACAGATGCTCCCACGTGGTCCATTCCCTCATGGTGTCAGTGGGTTCTCCGCATaGTTTCTTCCTACCTACAAT +
Preference number: 4 (lower is better)
Translates to: PNETCTQMLPRGPFPHGVSGFSA*FLPTYN
Trigger: ATTGTAGGTAGGAAGAAAGCATGCGGAGAACCCACT...GACACCATGAGGGAATGGACCACGTGGGAGCATCTGTGTGCAAGTCTCATTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR GCA 90 bp TCCTCCTTTTCTGTAACGGATCCGGAAGCAGTCCCACCAAGTCGGAGGAGTTTCAGTGGGTTCTCCGCATaGTTTCTTCCTACCTACAAT +
Preference number: 4 (lower is better)
Translates to: SSFSVTDPEAVPPSRRSFSGFSA*FLPTYN
Trigger: ATTGTAGGTAGGAAGAAAGCATGCGGAGAACCCACT...GAAACTCCTCCGACTTGGTGGGACTGCTTCCGGATCCGTTACAGAAAAGGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427751.5
CDS-3UTR GCA 90 bp CCATTTATTGCTGTGCTGTCCGGGGAAGACACCGTGCAAATGCCAAAGTGCACTAATCACACCATTTATTaGTGTGCTGTCCGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: PFIAVLSGEDTVQMPKCTNHTIY*CAVRGR
Trigger: TCTTCCCCGGACAGCACAGCAATAAATGGTGTGATT...AGTGCACTTTGGCATTTGCACGGTGTCTTCCCCGGACAGCACAGCAATAAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR TCA 90 bp TGTGACTCCCAAACCCTCGAATATTTTATGAATCTAAGAGTCCAGACGCAGTTCGCGCCAGAACCTTGCTaGAGAACTGGAACACCTGCT +
Preference number: 4 (lower is better)
Translates to: CDSQTLEYFMNLRVQTQFAPEPC*RTGTPA
Trigger: AGCAGGTGTTCCAGTTCTTCAGCAAGGTTCTGGCGC...GAACTGCGTCTGGACTCTTAGATTCATAAAATATTCGAGGGTTTGGGAGTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR GCA 90 bp CAGTGGGTTCTCCGCATGCTTTCTTCCTACCTACAATCTTTTTACCTTCCAGGAGGGTGCTTTCATCTGTaGTCTCGATGTAGTAGTGCG +
Preference number: 4 (lower is better)
Translates to: QWVLRMLSSYLQSFYLPGGCFHL*SRCSSA
Trigger: CGCACTACTACATCGAGAGCACAGATGAAAGCACCC...TCCTGGAAGGTAAAAAGATTGTAGGTAGGAAGAAAGCATGCGGAGAACCCACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427751.5
CDS GCA 90 bp ACCTCGGCCTTGCCCAGCGTGCAGAGAGTCTCCAGGATCTTGTGCTaGAGCAGGTACTCCAGGCAGGGCCCTGCCTCACCCGCGGCCGCC +
Preference number: 5 (lower is better)
Translates to: TSALPSVQRVSRILC*SRYSRQGPASPAAA
Trigger: GGCGGCCGCGGGTGAGGCAGGGCCCTGCCTGGAGTACCTGCTGCAGCACAAGATCCTGGAGACTCTCTGCACGCTGGGCAAGGCCGAGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000488968.1
ENST00000498344.2
CDS-3UTR CAA 90 bp CCACCGTCCAGCTCCTCGGTCTCAGCAGGCATGTGGCTGTTCAAGGCCTGGGCCCGCCTTCGTGGGGACTaGGACCGGCAGGGCCTGCAC +
Preference number: 5 (lower is better)
Translates to: PPSSSSVSAGMWLFKAWARLRGD*DRQGLH
Trigger: GTGCAGGCCCTGCCGGTCCAAGTCCCCACGAAGGCG...GGCCCAGGCCTTGAACAGCCACATGCCTGCTGAGACCGAGGAGCTGGACGGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427751.5
CDS CCA 90 bp AGGAGGAAAGCCACGGCCTCCCGCAGCAGCGCAGGGGAGCGAAGCTaGCGCAGCATGGCTGTGAGGAGGGCGGTGGAGGTCAAGATGCTC +
Preference number: 5 (lower is better)
Translates to: RRKATASRSSAGERS*RSMAVRRAVEVKML
Trigger: GAGCATCTTGACCTCCACCGCCCTCCTCACAGCCATGCTGCGCCAGCTTCGCTCCCCTGCGCTGCTGCGGGAGGCCGTGGCTTTCCTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS GCA 90 bp AGGGTCTGGTGGTCCAGCTGCTCCCCAGGAGCCTGGCCCGTCAACTaGTTGCGCACCAGGAGCAGCTTGCCTGGGAACTGGGGTACCCTC +
Preference number: 5 (lower is better)
Translates to: RVWWSSCSPGAWPVN*LRTRSSLPGNWGTL
Trigger: GAGGGTACCCCAGTTCCCAGGCAAGCTGCTCCTGGTGCGCAAGCAGTTGACGGGCCAGGCTCCTGGGGAGCAGCTGGACCACCAGACCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289921.8
ENST00000450006.7
ENST00000496599.3
ENST00000523633.1
CDS CCA 90 bp CGCAGGGCAGCAGGCGCTGCTCTGTACCAGGTAGGTGGCAGCTGCTaGGGAGGCCATGCTCACCAGGAGCAGCAGGTTCTCCTGGGCCTT +
Preference number: 5 (lower is better)
Translates to: RRAAGAALYQVGGSC*GGHAHQEQQVLLGL
Trigger: AAGGCCCAGGAGAACCTGCTGCTCCTGGTGAGCATGGCCTCCCCAGCAGCTGCCACCTACCTGGTACAGAGCAGCGCCTGCTGCCCTGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289921.8
ENST00000450006.7
ENST00000464226.2
CDS CCA 90 bp GCCGGACGATCGCAGGGCAGCAGGCGCTGCTCTGTACCAGGTAGGTaGCAGCTGCTGGGGAGGCCATGCTCACCAGGAGCAGCAGGTTCT +
Preference number: 5 (lower is better)
Translates to: AGRSQGSRRCSVPGR*QLLGRPCSPGAAGS
Trigger: AGAACCTGCTGCTCCTGGTGAGCATGGCCTCCCCAGCAGCTGCCACCTACCTGGTACAGAGCAGCGCCTGCTGCCCTGCGATCGTCCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289921.8
ENST00000450006.7
ENST00000464226.2
CDS-3UTR CAA 90 bp TCCCGCCAGGCTCAGGGGCCTGGAGTCAGGGGGCGTCCTTCCCTTATCTGTCCCGGGTCCTGCTGGATCTaGGAGCAGAGGACGGTGGTG +
Preference number: 5 (lower is better)
Translates to: SRQAQGPGVRGRPSLICPGSCWI*EQRTVV
Trigger: CACCACCGTCCTCTGCTCCAAGATCCAGCAGGACCC...GGGACAGATAAGGGAAGGACGCCCCCTGACTCCAGGCCCCTGAGCCTGGCGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR CAA 90 bp CTCTTCAGAGCGGCGAGGTCCTCCCCCGCGGGGAGGAATGTGGGAGAGGCAGAGTGGCCCGTCAACTGCTaGCGCACCAGGAGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: LFRAARSSPAGRNVGEAEWPVNC*RTRSSL
Trigger: CAAGCTGCTCCTGGTGCGCAAGCAGTTGACGGGCCA...CTCTGCCTCTCCCACATTCCTCCCCGCGGGGGAGGACCTCGCCGCTCTGAAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS GCA 90 bp TCTGGTGGTCCAGCTGCTCCCCAGGAGCCTGGCCCGTCAACTGCTTaGGCACCAGGAGCAGCTTGCCTGGGAACTGGGGTACCCTCTGGA +
Preference number: 5 (lower is better)
Translates to: SGGPAAPQEPGPSTA*APGAACLGTGVPSG
Trigger: TCCAGAGGGTACCCCAGTTCCCAGGCAAGCTGCTCCTGGTGCGCAAGCAGTTGACGGGCCAGGCTCCTGGGGAGCAGCTGGACCACCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289921.8
ENST00000450006.7
ENST00000496599.3
ENST00000523633.1
CDS-3UTR CAA 90 bp AGTCCAGACGCAGTTCATCCACGGAGATCTGCGCCCCGTCCACACCAACACCCAGGGCGGCCCTCAAGGTaGCGCAGGACCAGGCTGTGG +
Preference number: 5 (lower is better)
Translates to: SPDAVHPRRSAPRPHQHPGRPSR*RRTRLW
Trigger: CCACAGCCTGGTCCTGCGCAACCTTGAGGGCCGCCC...TGGGTGTTGGTGTGGACGGGGCGCAGATCTCCGTGGATGAACTGCGTCTGGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS GCA 90 bp GGTGGGGTGTGCTACTGGCACCTAGTGGGTAGAGGCCAGAATTACTaGTGCACATCCCACACCGCCCAGGACAGCCCCGCGCAGGGAAGG +
Preference number: 5 (lower is better)
Translates to: GGVCYWHLVGRGQNY*CTSHTAQDSPAQGR
Trigger: CCTTCCCTGCGCGGGGCTGTCCTGGGCGGTGTGGGATGTGCAGCAGTAATTCTGGCCTCTACCCACTAGGTGCCAGTAGCACACCCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488968.1
CDS-3UTR CAA 90 bp CGGTGCTCTTCAGAGCGGCGAGGTCCTCCCCCGCGGGGAGGAATGTGGGAGAGGTGGAAAGCCATCTGTTaGGCTCCTTGGCACCTGGCA +
Preference number: 5 (lower is better)
Translates to: RCSSERRGPPPRGGMWERWKAIC*APWHLA
Trigger: TGCCAGGTGCCAAGGAGCCAAACAGATGGCTTTCCA...CCTCTCCCACATTCCTCCCCGCGGGGGAGGACCTCGCCGCTCTGAAGAGCACCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS TCA 90 bp CTGGGGAGGGCCAGGCCGCACCTGTGCTCTCGATGTAGTAGTGCGTaGTGCCCTTCCAGTGCTCCACGAAGGCCTGCAGCAGGTCAATGC +
Preference number: 5 (lower is better)
Translates to: LGRARPHLCSRCSSA*CPSSAPRRPAAGQC
Trigger: GCATTGACCTGCTGCAGGCCTTCGTGGAGCACTGGAAGGGCATCACGCACTACTACATCGAGAGCACAGGTGCGGCCTGGCCCTCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488968.1
CDS GCA 90 bp CCCCAGGAGCCTGGCCCGTCAACTGCTTGCGCACCAGGAGCAGCTTaGCTGGGAACTGGGGTACCCTCTGGATTCTCTGCATCAAGTCCC +
Preference number: 5 (lower is better)
Translates to: PQEPGPSTACAPGAA*LGTGVPSGFSASSP
Trigger: GGGACTTGATGCAGAGAATCCAGAGGGTACCCCAGTTCCCAGGCAAGCTGCTCCTGGTGCGCAAGCAGTTGACGGGCCAGGCTCCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289921.8
ENST00000450006.7
ENST00000496599.3
ENST00000523633.1
CDS GCA 90 bp TGGGGGTGGGGGAAGAGGGCAAGCCGGGACAGGACCGAGGTCACCTaGAGGTTCAGGCTGTATGGCTGTAGGAACATGGTGGACAGAGCC +
Preference number: 5 (lower is better)
Translates to: WGWGKRASRDRTEVT*RFRLYGCRNMVDRA
Trigger: GGCTCTGTCCACCATGTTCCTACAGCCATACAGCCTGAACCTGCAGGTGACCTCGGTCCTGTCCCGGCTTGCCCTCTTCCCCCACCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000496599.3
CDS CCA 90 bp CGGCCCTCAAGGTTGCGCAGGACCAGGCTGTGGATGATCCCCTCGTaGGGCTTCTGCAGCAGCTCCTCAAACAGCCGGAGTGTGGTGATG +
Preference number: 5 (lower is better)
Translates to: RPSRLRRTRLWMIPS*GFCSSSSNSRSVVM
Trigger: CATCACCACACTCCGGCTGTTTGAGGAGCTGCTGCAGAAGCCCCACGAGGGGATCATCCACAGCCTGGTCCTGCGCAACCTTGAGGGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289921.8
ENST00000450006.7
ENST00000462914.3
ENST00000491733.2
CDS-3UTR CAA 90 bp CAGATGCTCCCACGTGGTCCATTCCCTCATGGTGTCTCCGGGGTGGGCAGACTCGCCACCCGACTCTTCTaGCTCTGGCACAGCCCAAGC +
Preference number: 5 (lower is better)
Translates to: QMLPRGPFPHGVSGVGRLATRLF*LWHSPS
Trigger: GCTTGGGCTGTGCCAGAGCAAGAAGAGTCGGGTGGC...GAGTCTGCCCACCCCGGAGACACCATGAGGGAATGGACCACGTGGGAGCATCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR CAA 90 bp CAGACGCAGTTCATCCACGGAGATCTGCGCCCCGTCCACACCAACACCCACGTTCTGGCCTGCTCCTCCTaGCCCAGGAGCAAAGCCAGC +
Preference number: 5 (lower is better)
Translates to: QTQFIHGDLRPVHTNTHVLACSS*PRSKAS
Trigger: GCTGGCTTTGCTCCTGGGCAAGGAGGAGCAGGCCAG...AACGTGGGTGTTGGTGTGGACGGGGCGCAGATCTCCGTGGATGAACTGCGTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS CCA 90 bp TGCCCTCTAAGGTGGCAATGTCTGCGGGGTCCAGGAAGACAGGCATaGACCGGTACAACTGGCAAAGGTGCCGGACGATCGCAGGGCAGC +
Preference number: 5 (lower is better)
Translates to: CPLRWQCLRGPGRQA*TGTTGKGAGRSQGS
Trigger: GCTGCCCTGCGATCGTCCGGCACCTTTGCCAGTTGTACCGGTCCATGCCTGTCTTCCTGGACCCCGCAGACATTGCCACCTTAGAGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289921.8
ENST00000450006.7
ENST00000464226.2
CDS CCA 90 bp CCTCTGCTCTTGAAGGACCCCAGAGGCACCAGCCTGGAGTTCTCCTaGCCCAGGCCCACTAGCTACCTGATCCAGAATCCGGGACATGCG +
Preference number: 5 (lower is better)
Translates to: PLLLKDPRGTSLEFS*PRPTSYLIQNPGHA
Trigger: CGCATGTCCCGGATTCTGGATCAGGTAGCTAGTGGGCCTGGGCCAGGAGAACTCCAGGCTGGTGCCTCTGGGGTCCTTCAAGAGCAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477614.1
ENST00000496599.3
CDS-3UTR CAA 90 bp CCACCGTCCAGCTCCTCGGTCTCAGCAGGCATGTGGCTGTTCAAGGCCTGGGCCAGAGTCTCCAGGATCTaGTGCTGCAGCAGGTACTCC +
Preference number: 5 (lower is better)
Translates to: PPSSSSVSAGMWLFKAWARVSRI*CCSRYS
Trigger: GGAGTACCTGCTGCAGCACAAGATCCTGGAGACTCT...GGCCCAGGCCTTGAACAGCCACATGCCTGCTGAGACCGAGGAGCTGGACGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427751.5
CDS-3UTR CAA 90 bp TCCTTGTCCCCGTGGCTGGTTGTGTCCTTAGGCAGGGCAGTGGGTTCTCCGCATTCGTGGGAGCAGTCCTaGTCCCCGTGGCTGGTTGTG +
Preference number: 5 (lower is better)
Translates to: SLSPWLVVSLGRAVGSPHSWEQS*SPWLVV
Trigger: CACAACCAGCCACGGGGACAAGGACTGCTCCCACGA...ATGCGGAGAACCCACTGCCCTGCCTAAGGACACAACCAGCCACGGGGACAAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427751.5
CDS-3UTR CAA 90 bp AAGCTCCTCCAAGAAGGCCCCAAGGACCTTGCTGCCTGGAAAGCCATCTGTTTGGGGCGGCCCTCAAGGTaGCGCAGGACCAGGCTGTGG +
Preference number: 5 (lower is better)
Translates to: KLLQEGPKDLAAWKAICLGRPSR*RRTRLW
Trigger: CCACAGCCTGGTCCTGCGCAACCTTGAGGGCCGCCC...CAAACAGATGGCTTTCCAGGCAGCAAGGTCCTTGGGGCCTTCTTGGAGGAGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CAA 90 bp CAGACGCAGTTCATCCACGGAGATCTGCGCCCCGTCCACACCAACACCCACGTTTGGCCCGTCAACTGCTaGCGCACCAGGAGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: QTQFIHGDLRPVHTNTHVWPVNC*RTRSSL
Trigger: CAAGCTGCTCCTGGTGCGCAAGCAGTTGACGGGCCA...AACGTGGGTGTTGGTGTGGACGGGGCGCAGATCTCCGTGGATGAACTGCGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CAA 90 bp CATGCCGCAGTCTCCTTGAGTGAGCCCGGGAGCAGAAGCCCCATCCCAGGAGGGTCATGTGGGGGAAACTaGACGAAGGCAATGGCAGCC +
Preference number: 5 (lower is better)
Translates to: HAAVSLSEPGSRSPIPGGSCGGN*TKAMAA
Trigger: GGCTGCCATTGCCTTCGTCAAGTTTCCCCCACATGA...CCCTCCTGGGATGGGGCTTCTGCTCCCGGGCTCACTCAAGGAGACTGCGGCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CAA 90 bp AGTCCAGACGCAGTTCATCCACGGAGATCTGCGCCCCGTCCACACCAACACCCACATGCCGCAGTCTCCTaGAGTGAGCCCGGGAGCAGA +
Preference number: 5 (lower is better)
Translates to: SPDAVHPRRSAPRPHQHPHAAVS*SEPGSR
Trigger: TCTGCTCCCGGGCTCACTCAAGGAGACTGCGGCATG...TGGGTGTTGGTGTGGACGGGGCGCAGATCTCCGTGGATGAACTGCGTCTGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CAA 90 bp CATGCCGCAGTCTCCTTGAGTGAGCCCGGGAGCAGAAGCCCCATCCCAGGAGGGGTTTCGTGTCACCTCTaGGCAACCTGTGCCTGGCTT +
Preference number: 5 (lower is better)
Translates to: HAAVSLSEPGSRSPIPGGVSCHL*ATCAWL
Trigger: AAGCCAGGCACAGGTTGCCAAGAGGTGACACGAAAC...CCCTCCTGGGATGGGGCTTCTGCTCCCGGGCTCACTCAAGGAGACTGCGGCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CAA 90 bp CGTGCAGAGAGTCTCCAGGATCTTGTGCTGCAGCAGGTACTCCAGGCAGGGCCCAACAAGGTCCTGGAGTaGTCGCCCCCACGGCTTCCT +
Preference number: 5 (lower is better)
Translates to: RAESLQDLVLQQVLQAGPNKVLE*SPPRLP
Trigger: AGGAAGCCGTGGGGGCGACAACTCCAGGACCTTGTT...GGGCCCTGCCTGGAGTACCTGCTGCAGCACAAGATCCTGGAGACTCTCTGCACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427751.5
CDS GCA 90 bp AACAGCATGAGAGCCCGGCCTCCGCCCGCCCCTGCTCACCGTGTGTaGCTCTGTGATGAGGTGGTCGCAGTAATCAAACCAGCCCAAGAA +
Preference number: 5 (lower is better)
Translates to: NSMRARPPPAPAHRV*LCDEVVAVIKPAQE
Trigger: TTCTTGGGCTGGTTTGATTACTGCGACCACCTCATCACAGAGGCACACACGGTGAGCAGGGGCGGGCGGAGGCCGGGCTCTCATGCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464226.2
CDS GCA 90 bp AGGTTGCGCAGGACCAGGCTGTGGATGATCCCCTCGTGGGGCTTCTaGAGCAGCTCCTCAAACAGCCGGAGTGTGGTGATGCTGATCTGG +
Preference number: 5 (lower is better)
Translates to: RLRRTRLWMIPSWGF*SSSSNSRSVVMLIW
Trigger: CCAGATCAGCATCACCACACTCCGGCTGTTTGAGGAGCTGCTGCAGAAGCCCCACGAGGGGATCATCCACAGCCTGGTCCTGCGCAACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491733.2
CDS GCA 90 bp CACCTCGGCCTCCCACGTAGCTGGGGCTACAGGCACGCATCACCATaGCTGGCTCTTGTCAGTATGAATCCCTGCTGTGTCCCCAGCATC +
Preference number: 5 (lower is better)
Translates to: HLGLPRSWGYRHASP*LALVSMNPCCVPSI
Trigger: GATGCTGGGGACACAGCAGGGATTCATACTGACAAGAGCCAGGCATGGTGATGCGTGCCTGTAGCCCCAGCTACGTGGGAGGCCGAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000488968.1
ENST00000498344.2
CDS CCA 90 bp TGGCCCGTCAACTGCTTGCGCACCAGGAGCAGCTTGCCTGGGAACTaGGGTACCCTCTGGATTCTCTGCATCAAGTCCCCGATCACCCTC +
Preference number: 5 (lower is better)
Translates to: WPVNCLRTRSSLPGN*GTLWILCIKSPITL
Trigger: GAGGGTGATCGGGGACTTGATGCAGAGAATCCAGAGGGTACCCCAGTTCCCAGGCAAGCTGCTCCTGGTGCGCAAGCAGTTGACGGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289921.8
ENST00000450006.7
ENST00000496599.3
CDS CCA 90 bp AGGAGCCTGGCCCGTCAACTGCTTGCGCACCAGGAGCAGCTTGCCTaGGAACTGGGGTACCCTCTGGATTCTCTGCATCAAGTCCCCGAT +
Preference number: 5 (lower is better)
Translates to: RSLARQLLAHQEQLA*ELGYPLDSLHQVPD
Trigger: ATCGGGGACTTGATGCAGAGAATCCAGAGGGTACCCCAGTTCCCAGGCAAGCTGCTCCTGGTGCGCAAGCAGTTGACGGGCCAGGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289921.8
ENST00000450006.7
ENST00000496599.3
ENST00000523633.1
CDS-3UTR CAA 90 bp TGGGTCCTGCTGGATCTTGGAGCAGAGGACGGTGGTGAACTGCACCTCCTCCTTGGGTCCTGCTGGATCTaGGAGCAGAGGACGGTGGTG +
Preference number: 5 (lower is better)
Translates to: WVLLDLGAEDGGELHLLLGSCWI*EQRTVV
Trigger: CACCACCGTCCTCTGCTCCAAGATCCAGCAGGACCC...AAGGAGGAGGTGCAGTTCACCACCGTCCTCTGCTCCAAGATCCAGCAGGACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427751.5
CDS-3UTR CAA 90 bp TCCGGGGAAGACACCGTGCAAATGCCAAAGTGCACTGAGGAGAGGGGAGGGTCTGGGTCCTGCTGGATCTaGGAGCAGAGGACGGTGGTG +
Preference number: 5 (lower is better)
Translates to: SGEDTVQMPKCTEERGGSGSCWI*EQRTVV
Trigger: CACCACCGTCCTCTGCTCCAAGATCCAGCAGGACCC...AGACCCTCCCCTCTCCTCAGTGCACTTTGGCATTTGCACGGTGTCTTCCCCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CAA 90 bp ACCCAAGCTCCTCCAAGAAGGCCCCAAGGACCTTGCTGCCTGGAAAGCCATCTGTCGTGGGAGCAGTCCTaGTCCCCGTGGCTGGTTGTG +
Preference number: 5 (lower is better)
Translates to: TQAPPRRPQGPCCLESHLSWEQS*SPWLVV
Trigger: CACAACCAGCCACGGGGACAAGGACTGCTCCCACGA...CAGATGGCTTTCCAGGCAGCAAGGTCCTTGGGGCCTTCTTGGAGGAGCTTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CAA 90 bp TCCAGACGCAGTTCATCCACGGAGATCTGCGCCCCGTCCACACCAACACCCACGAGGGAGGTAATCAGGTaGCTCTCTGTGGTCCCACCG +
Preference number: 5 (lower is better)
Translates to: SRRSSSTEICAPSTPTPTREVIR*LSVVPP
Trigger: CGGTGGGACCACAGAGAGCAACCTGATTACCTCCCT...CGTGGGTGTTGGTGTGGACGGGGCGCAGATCTCCGTGGATGAACTGCGTCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CAA 90 bp AGAGTCCAGACGCAGTTCATCCACGGAGATCTGCGCCCCGTCCACACCAACACCGAGCTAGGCGAGGCTTaGCGGGAGTTTGAAAGCCGG +
Preference number: 5 (lower is better)
Translates to: RVQTQFIHGDLRPVHTNTELGEA*REFESR
Trigger: CCGGCTTTCAAACTCCCGCAAAGCCTCGCCTAGCTC...GGTGTTGGTGTGGACGGGGCGCAGATCTCCGTGGATGAACTGCGTCTGGACTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CAA 90 bp CACTTCCCGCCAGGCTCAGGGGCCTGGAGTCAGGGGGCGTCCTTCCCTTATCTGAGGCACAGGAAACTGTaGACGATCTCGGTCACTGCT +
Preference number: 5 (lower is better)
Translates to: HFPPGSGAWSQGASFPYLRHRKL*TISVTA
Trigger: AGCAGTGACCGAGATCGTCAACAGTTTCCTGTGCCT...CAGATAAGGGAAGGACGCCCCCTGACTCCAGGCCCCTGAGCCTGGCGGGAAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR CAA 90 bp TCCGGGGAAGACACCGTGCAAATGCCAAAGTGCACTGAGGAGAGGGGAGGGTCTAGGAAGGCAGAGGTCTaGGCTTCCTCGGGGACCAGG +
Preference number: 5 (lower is better)
Translates to: SGEDTVQMPKCTEERGGSRKAEV*ASSGTR
Trigger: CCTGGTCCCCGAGGAAGCCAAGACCTCTGCCTTCCT...AGACCCTCCCCTCTCCTCAGTGCACTTTGGCATTTGCACGGTGTCTTCCCCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CAA 90 bp GTTTGGCTCCTTGGCACCTGGCATGCCCATTCCCTGAAACCCAGTCTGGTGTGGCATGCCGCAGTCTCCTaGAGTGAGCCCGGGAGCAGA +
Preference number: 5 (lower is better)
Translates to: VWLLGTWHAHSLKPSLVWHAAVS*SEPGSR
Trigger: TCTGCTCCCGGGCTCACTCAAGGAGACTGCGGCATG...CCACACCAGACTGGGTTTCAGGGAATGGGCATGCCAGGTGCCAAGGAGCCAAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CAA 90 bp TCCAGACGCAGTTCATCCACGGAGATCTGCGCCCCGTCCACACCAACACCCACGGGTGCGGAACATGCTTaGGGCATTTGCCATGAGGCG +
Preference number: 5 (lower is better)
Translates to: SRRSSSTEICAPSTPTPTGAEHA*GICHEA
Trigger: CGCCTCATGGCAAATGCCCAAAGCATGTTCCGCACC...CGTGGGTGTTGGTGTGGACGGGGCGCAGATCTCCGTGGATGAACTGCGTCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS TCA 90 bp AGCTGGGGGAAGTGCAGCCACCTCTTCCTTGCAGAGTCAGGCCAGTaGGACCCCCAACCAGGCTACTCCTTCCTCACACAGCCTCTTTCC +
Preference number: 5 (lower is better)
Translates to: SWGKCSHLFLAESGQ*DPQPGYSFLTQPLS
Trigger: GGAAAGAGGCTGTGTGAGGAAGGAGTAGCCTGGTTGGGGGTCTCACTGGCCTGACTCTGCAAGGAAGAGGTGGCTGCACTTCCCCCAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000488968.1
CDS TCA 90 bp CAGCCTCATGACTGCAGAGCAGCCACTCAGATGCCATCCCCTCAGTaGGCGGTCCTGATGGGACCAGGTGCCAAGGCTTTGGCTCTTTGG +
Preference number: 5 (lower is better)
Translates to: QPHDCRAATQMPSPQ*AVLMGPGAKALALW
Trigger: CCAAAGAGCCAAAGCCTTGGCACCTGGTCCCATCAGGACCGCTCACTGAGGGGATGGCATCTGAGTGGCTGCTCTGCAGTCATGAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488968.1
CDS GCA 90 bp AGGTTGCGCAGGACCAGGCTGTGGATGATCCCCTCGTGGGGCTTCTaGAGCAGCTCCTCAAACAGCCGGAGTGTGGTGATGCTGATCTCA +
Preference number: 5 (lower is better)
Translates to: RLRRTRLWMIPSWGF*SSSSNSRSVVMLIS
Trigger: TGAGATCAGCATCACCACACTCCGGCTGTTTGAGGAGCTGCTGCAGAAGCCCCACGAGGGGATCATCCACAGCCTGGTCCTGCGCAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289921.8
ENST00000450006.7
ENST00000462914.3
CDS CCA 90 bp AAAGGACAGGGGTGGCACCAAAGAACCGAAGCAGAGGCAACCCTGTaGCCAACCTCTGCTCTTGAAGGACCCCAGAGGCACCAGCCTGGA +
Preference number: 5 (lower is better)
Translates to: KGQGWHQRTEAEATL*PTSALEGPQRHQPG
Trigger: TCCAGGCTGGTGCCTCTGGGGTCCTTCAAGAGCAGAGGTTGGCCACAGGGTTGCCTCTGCTTCGGTTCTTTGGTGCCACCCCTGTCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496599.3
CDS-3UTR CAA 90 bp CCAAGCTCCTCCAAGAAGGCCCCAAGGACCTTGCTGCCTGGAAAGCCATCTGTTGCCACCCGACTCTTCTaGCTCTGGCACAGCCCAAGC +
Preference number: 5 (lower is better)
Translates to: PSSSKKAPRTLLPGKPSVATRLF*LWHSPS
Trigger: GCTTGGGCTGTGCCAGAGCAAGAAGAGTCGGGTGGC...AACAGATGGCTTTCCAGGCAGCAAGGTCCTTGGGGCCTTCTTGGAGGAGCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CAA 90 bp CTCCTGTTTCGTGTCACCTCTTGGCAACCTGTGCCTGGCTTCTGGCTGTCACCCGAGCTAGGCGAGGCTTaGCGGGAGTTTGAAAGCCGG +
Preference number: 5 (lower is better)
Translates to: LLFRVTSWQPVPGFWLSPELGEA*REFESR
Trigger: CCGGCTTTCAAACTCCCGCAAAGCCTCGCCTAGCTC...GGGTGACAGCCAGAAGCCAGGCACAGGTTGCCAAGAGGTGACACGAAACAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450006.7
CDS-3UTR CAA 90 bp CCTTGCTGCCTGGAAAGCCATCTGTTTGGCTCCTTGGCACCTGGCATGCCCATTAGGAAGGCAGAGGTCTaGGCTTCCTCGGGGACCAGG +
Preference number: 5 (lower is better)
Translates to: PCCLESHLFGSLAPGMPIRKAEV*ASSGTR
Trigger: CCTGGTCCCCGAGGAAGCCAAGACCTCTGCCTTCCT...AATGGGCATGCCAGGTGCCAAGGAGCCAAACAGATGGCTTTCCAGGCAGCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CAA 90 bp TCTGGCCTGCTCCTCCTTGCCCAGGAGCAAAGCCAGCAACTGTGTAGTCCCGCTATCTTGCCCCTGGAGTaGAGTCACAGGCTTGGCCCT +
Preference number: 5 (lower is better)
Translates to: SGLLLLAQEQSQQLCSPAILPLE*SHRLGP
Trigger: AGGGCCAAGCCTGTGACTCAACTCCAGGGGCAAGAT...AGCGGGACTACACAGTTGCTGGCTTTGCTCCTGGGCAAGGAGGAGCAGGCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR CAA 90 bp GATGCTCCCACGTGGTCCATTCCCTCATGGTGTCTCCGGGGTGGGCAGACTCTCAGAAGGTGGGGAAACTaGGCCAAGAACAGAGCCACG +
Preference number: 5 (lower is better)
Translates to: DAPTWSIPSWCLRGGQTLRRWGN*AKNRAT
Trigger: CGTGGCTCTGTTCTTGGCCAAGTTTCCCCACCTTCT...GAGAGTCTGCCCACCCCGGAGACACCATGAGGGAATGGACCACGTGGGAGCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS CCA 90 bp TCTGTAACGGATCCGGAAGCAGTCCCACCAAGTCGGAGGAGTTTCTaGAAGAGCACCAGGACAGAAACAGAGGGGAGAGGGGTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: SVTDPEAVPPSRRSF*KSTRTETEGRGVAG
Trigger: CCCTGCCACCCCTCTCCCCTCTGTTTCTGTCCTGGTGCTCTTCCAGAAACTCCTCCGACTTGGTGGGACTGCTTCCGGATCCGTTACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464226.2
CDS-3UTR CAA 90 bp TCTCGGAGCCATCAGCTCACTCCCCATCTTGCCCCTGGAGTTGAGTCACAGGCTAGGCGGCTGGGAGTTTaGCAACAGTTTCCAGGGGAG +
Preference number: 5 (lower is better)
Translates to: SRSHQLTPHLAPGVESQARRLGV*QQFPGE
Trigger: CTCCCCTGGAAACTGTTGCAAAACTCCCAGCCGCCT...AGCCTGTGACTCAACTCCAGGGGCAAGATGGGGAGTGAGCTGATGGCTCCGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS TCA 90 bp TCTTGGCGGGGGTGCTTTCATCTGTGCTCTCGATGTAGTAGTGCGTaGTGCCCTTCCAGTGCTCCACGAAGGCCTGCAGCAGGTCAATGC +
Preference number: 5 (lower is better)
Translates to: SWRGCFHLCSRCSSA*CPSSAPRRPAAGQC
Trigger: GCATTGACCTGCTGCAGGCCTTCGTGGAGCACTGGAAGGGCATCACGCACTACTACATCGAGAGCACAGATGAAAGCACCCCCGCCAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289921.8
ENST00000427751.5
ENST00000450006.7
ENST00000498344.2
CDS TCA 90 bp TATGGTTACCTGGCAACCAGTCCGTATCCACCCATGGCAGCCTCATaGCTGCAGAGCAGCCACTCAGATGCCATCCCCTCAGTGAGCGGT +
Preference number: 5 (lower is better)
Translates to: YGYLATSPYPPMAAS*LQSSHSDAIPSVSG
Trigger: ACCGCTCACTGAGGGGATGGCATCTGAGTGGCTGCTCTGCAGTCATGAGGCTGCCATGGGTGGATACGGACTGGTTGCCAGGTAACCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488968.1
CDS GCA 90 bp CCCCCTAGCTTTCCTTTAAGGAACAGGAGCTTGAGTAGGGCGGCCTaGCCCACGCACTTCCAACCCTTCTGGTCTAGGGACCATTCTGGA +
Preference number: 5 (lower is better)
Translates to: PPSFPLRNRSLSRAA*PTHFQPFWSRDHSG
Trigger: TCCAGAATGGTCCCTAGACCAGAAGGGTTGGAAGTGCGTGGGGCAGGCCGCCCTACTCAAGCTCCTGTTCCTTAAAGGAAAGCTAGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488968.1
CDS CCA 90 bp GGGATGCAGGATATGGTTACCTGGCAACCAGTCCGTATCCACCCATaGCAGCCTCATGACTGCAGAGCAGCCACTCAGATGCCATCCCCT +
Preference number: 5 (lower is better)
Translates to: GMQDMVTWQPVRIHP*QPHDCRAATQMPSP
Trigger: AGGGGATGGCATCTGAGTGGCTGCTCTGCAGTCATGAGGCTGCCATGGGTGGATACGGACTGGTTGCCAGGTAACCATATCCTGCATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488968.1
CDS-3UTR CAA 90 bp CAGACGCAGTTCATCCACGGAGATCTGCGCCCCGTCCACACCAACACCCACGTTGGAATGTCTGTCTTCTaGGCGGGGGTGCTTTCATCT +
Preference number: 5 (lower is better)
Translates to: QTQFIHGDLRPVHTNTHVGMSVF*AGVLSS
Trigger: AGATGAAAGCACCCCCGCCAAGAAGACAGACATTCC...AACGTGGGTGTTGGTGTGGACGGGGCGCAGATCTCCGTGGATGAACTGCGTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CAA 90 bp TGCACCTCCTCCTTTTCTGTAACGGATCCGGAAGCAGTCCCACCAAGTCGGAGGAGGGAGGTAATCAGGTaGCTCTCTGTGGTCCCACCG +
Preference number: 5 (lower is better)
Translates to: CTSSFSVTDPEAVPPSRRREVIR*LSVVPP
Trigger: CGGTGGGACCACAGAGAGCAACCTGATTACCTCCCT...CCTCCGACTTGGTGGGACTGCTTCCGGATCCGTTACAGAAAAGGAGGAGGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427751.5
CDS-3UTR CAA 90 bp AGACGCAGTTCATCCACGGAGATCTGCGCCCCGTCCACACCAACACCCACGTTTTCATGTGGGGGAAACTaGACGAAGGCAATGGCAGCC +
Preference number: 5 (lower is better)
Translates to: RRSSSTEICAPSTPTPTFSCGGN*TKAMAA
Trigger: GGCTGCCATTGCCTTCGTCAAGTTTCCCCCACATGA...AAACGTGGGTGTTGGTGTGGACGGGGCGCAGATCTCCGTGGATGAACTGCGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS TCA 90 bp CCCAGGGGTGCCTTGGCATGGCTAACCCAGATAAGAAAAGACCTCTaGGGCAGAGTCACCTCCCTTGGCTGGATGCTAAGGTGGCAGGTT +
Preference number: 5 (lower is better)
Translates to: PRGALAWLTQIRKDL*GRVTSLGWMLRWQV
Trigger: AACCTGCCACCTTAGCATCCAGCCAAGGGAGGTGACTCTGCCTCAGAGGTCTTTTCTTATCTGGGTTAGCCATGCCAAGGCACCCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491733.2
CDS TCA 90 bp CCCGCGCAGGGAAGGCTCCAGGTCCAATGCCAACTGTGCCAAGATTaGGAAACCTGGTCTAGCAGAACCCTCAGAGGGTCCCACAGATTT +
Preference number: 5 (lower is better)
Translates to: PAQGRLQVQCQLCQD*ETWSSRTLRGSHRF
Trigger: AAATCTGTGGGACCCTCTGAGGGTTCTGCTAGACCAGGTTTCTCAATCTTGGCACAGTTGGCATTGGACCTGGAGCCTTCCCTGCGCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488968.1
CDS CCA 90 bp CCTTTATCAGGGGGCAGCAGCATCGGTTTCCTTCAAACCCTAGGATaGGTACAGAGACAGGGACACATGGTCCTGGGCCCACAGAAGGCT +
Preference number: 5 (lower is better)
Translates to: PLSGGSSIGFLQTLG*VQRQGHMVLGPQKA
Trigger: AGCCTTCTGTGGGCCCAGGACCATGTGTCCCTGTCTCTGTACCCATCCTAGGGTTTGAAGGAAACCGATGCTGCTGCCCCCTGATAAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488968.1
CDS CCA 90 bp GGCCCATCTTTGTGGAGTGAACTGGGAACAGGAGCGCTGGGATGGTaGAGTGTTCTAAGTGAGACAGCCACAGTGCCCGTCCTGTTTGCT +
Preference number: 5 (lower is better)
Translates to: GPSLWSELGTGALGW*SVLSETATVPVLFA
Trigger: AGCAAACAGGACGGGCACTGTGGCTGTCTCACTTAGAACACTCCACCATCCCAGCGCTCCTGTTCCCAGTTCACTCCACAAAGATGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000488968.1
ENST00000498344.2
CDS CCA 90 bp GCAGGCCCATCTTTGTGGAGTGAACTGGGAACAGGAGCGCTGGGATaGTGGAGTGTTCTAAGTGAGACAGCCACAGTGCCCGTCCTGTTT +
Preference number: 5 (lower is better)
Translates to: AGPSLWSELGTGALG*WSVLSETATVPVLF
Trigger: AAACAGGACGGGCACTGTGGCTGTCTCACTTAGAACACTCCACCATCCCAGCGCTCCTGTTCCCAGTTCACTCCACAAAGATGGGCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000488968.1
ENST00000498344.2
CDS-3UTR CAA 90 bp CTTGCTGCCTGGAAAGCCATCTGTTTGGCTCCTTGGCACCTGGCATGCCCATTCAGAGTCTCCAGGATCTaGTGCTGCAGCAGGTACTCC +
Preference number: 5 (lower is better)
Translates to: LAAWKAICLAPWHLACPFRVSRI*CCSRYS
Trigger: GGAGTACCTGCTGCAGCACAAGATCCTGGAGACTCT...GAATGGGCATGCCAGGTGCCAAGGAGCCAAACAGATGGCTTTCCAGGCAGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CAA 90 bp TTGCTGTGCTGTCCGGGGAAGACACCGTGCAAATGCCAAAGTGCACTGAGGAGAAGGGAGGTAATCAGGTaGCTCTCTGTGGTCCCACCG +
Preference number: 5 (lower is better)
Translates to: LLCCPGKTPCKCQSALRRREVIR*LSVVPP
Trigger: CGGTGGGACCACAGAGAGCAACCTGATTACCTCCCT...TCTCCTCAGTGCACTTTGGCATTTGCACGGTGTCTTCCCCGGACAGCACAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CAA 90 bp CAGTTCATCCACGGAGATCTGCGCCCCGTCCACACCAACACCCACGTTTGTGCAAGGCTTTGCGGGAGTTaGAAAGCCGGAATCCAGGAA +
Preference number: 5 (lower is better)
Translates to: QFIHGDLRPVHTNTHVCARLCGS*KAGIQE
Trigger: TTCCTGGATTCCGGCTTTCAAACTCCCGCAAAGCCT...TGCACAAACGTGGGTGTTGGTGTGGACGGGGCGCAGATCTCCGTGGATGAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CAA 90 bp CTGGCATGCCCATTCCCTGAAACCCAGTCTGGTGTGGTCAACATGCCGCAGTCTCATCTGTTTGGCTCCTaGGCACCTGGCATGCCCATT +
Preference number: 5 (lower is better)
Translates to: LACPFPETQSGVVNMPQSHLFGS*APGMPI
Trigger: AATGGGCATGCCAGGTGCCAAGGAGCCAAACAGATG...AGACTGCGGCATGTTGACCACACCAGACTGGGTTTCAGGGAATGGGCATGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CAA 90 bp TTGCTGTGCTGTCCGGGGAAGACACCGTGCAAATGCCAAAGTGCACTGAGGAGAAGCTCACTCCCCATCTaGCCCCTGGAGTTGAGTCAC +
Preference number: 5 (lower is better)
Translates to: LLCCPGKTPCKCQSALRRSSLPI*PLELSH
Trigger: GTGACTCAACTCCAGGGGCAAGATGGGGAGTGAGCT...TCTCCTCAGTGCACTTTGGCATTTGCACGGTGTCTTCCCCGGACAGCACAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR CAA 90 bp TCCTCCTGTTTCGTGTCACCTCTTGGCAACCTGTGCCTGGCTTCTGGCTGTCACGTTTCGTGTCACCTCTaGGCAACCTGTGCCTGGCTT +
Preference number: 5 (lower is better)
Translates to: SSCFVSPLGNLCLASGCHVSCHL*ATCAWL
Trigger: AAGCCAGGCACAGGTTGCCAAGAGGTGACACGAAAC...GTGACAGCCAGAAGCCAGGCACAGGTTGCCAAGAGGTGACACGAAACAGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450006.7
CDS GCA 90 bp GACAAAAGTCCTTCCAGGCTCAGGACACAGTCCTCTGAGAACGCATaGATGCCCAGCCCTTTATCAGGGGGCAGCAGCATCGGTTTCCTT +
Preference number: 5 (lower is better)
Translates to: DKSPSRLRTQSSENA*MPSPLSGGSSIGFL
Trigger: AAGGAAACCGATGCTGCTGCCCCCTGATAAAGGGCTGGGCATGCATGCGTTCTCAGAGGACTGTGTCCTGAGCCTGGAAGGACTTTTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488968.1
CDS-3UTR CAA 90 bp GGTTGTGTCCTTAGGCAGGGCAGTGGGTTCTCCGCATGCTTTCTTCCTACCTACACCTGCGCCAGAACCTaGCTGAAGAACTGGAACACC +
Preference number: 5 (lower is better)
Translates to: GCVLRQGSGFSACFLPTYTCART*LKNWNT
Trigger: GGTGTTCCAGTTCTTCAGCAAGGTTCTGGCGCAGGT...GTAGGTAGGAAGAAAGCATGCGGAGAACCCACTGCCCTGCCTAAGGACACAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427751.5
CDS-3UTR CAA 90 bp CTGGCATGCCCATTCCCTGAAACCCAGTCTGGTGTGGTCAACATGCCGCAGTCTAGGCTTTGCGGGAGTTaGAAAGCCGGAATCCAGGAA +
Preference number: 5 (lower is better)
Translates to: LACPFPETQSGVVNMPQSRLCGS*KAGIQE
Trigger: TTCCTGGATTCCGGCTTTCAAACTCCCGCAAAGCCT...AGACTGCGGCATGTTGACCACACCAGACTGGGTTTCAGGGAATGGGCATGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CAA 90 bp GTGCTGTCCGGGGAAGACACCGTGCAAATGCCAAAGTGCACTGAGGAGAGGGGACAATCACACCATTTATaGCTGTGCTGTCCGGGGAAG +
Preference number: 5 (lower is better)
Translates to: VLSGEDTVQMPKCTEERGQSHHL*LCCPGK
Trigger: CTTCCCCGGACAGCACAGCAATAAATGGTGTGATTG...TCCCCTCTCCTCAGTGCACTTTGGCATTTGCACGGTGTCTTCCCCGGACAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS GCA 90 bp AAAGTCCTTCCAGGCTCAGGACACAGTCCTCTGAGAACGCATGCATaGCCAGCCCTTTATCAGGGGGCAGCAGCATCGGTTTCCTTCAAA +
Preference number: 5 (lower is better)
Translates to: KVLPGSGHSPLRTHA*PALYQGAAASVSFK
Trigger: TTTGAAGGAAACCGATGCTGCTGCCCCCTGATAAAGGGCTGGGCATGCATGCGTTCTCAGAGGACTGTGTCCTGAGCCTGGAAGGACTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488968.1
CDS-3UTR CAA 90 bp TATGAATCTAAGAGTCCAGACGCAGTTCATCCACGGAGATCTGCGCCCCGTCCAACCTGCGCCAGAACCTaGCTGAAGAACTGGAACACC +
Preference number: 5 (lower is better)
Translates to: YESKSPDAVHPRRSAPRPTCART*LKNWNT
Trigger: GGTGTTCCAGTTCTTCAGCAAGGTTCTGGCGCAGGT...TGGACGGGGCGCAGATCTCCGTGGATGAACTGCGTCTGGACTCTTAGATTCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CAA 90 bp ATTGCTGTGCTGTCCGGGGAAGACACCGTGCAAATGCCAAAGTGCACTGAGGAGAGGCACAGGAAACTGTaGACGATCTCGGTCACTGCT +
Preference number: 5 (lower is better)
Translates to: IAVLSGEDTVQMPKCTEERHRKL*TISVTA
Trigger: AGCAGTGACCGAGATCGTCAACAGTTTCCTGTGCCT...CTCCTCAGTGCACTTTGGCATTTGCACGGTGTCTTCCCCGGACAGCACAGCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CAA 90 bp CGCAATCACACCATTTATTGCTGTGCTGTCCGGGGAAGACACCGTGCAAATGCCCATCTGTTTGGCTCCTaGGCACCTGGCATGCCCATT +
Preference number: 5 (lower is better)
Translates to: RNHTIYCCAVRGRHRANAHLFGS*APGMPI
Trigger: AATGGGCATGCCAGGTGCCAAGGAGCCAAACAGATG...GGCATTTGCACGGTGTCTTCCCCGGACAGCACAGCAATAAATGGTGTGATTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CAA 90 bp GCTGTGCTGTCCGGGGAAGACACCGTGCAAATGCCAAAGTGCACTGAGGAGAGGCGGCTCACTGCAGCCTaGAACTTAAAGACAAGGTTT +
Preference number: 5 (lower is better)
Translates to: AVLSGEDTVQMPKCTEERRLTAA*NLKTRF
Trigger: AAACCTTGTCTTTAAGTTCAAGGCTGCAGTGAGCCG...CCTCTCCTCAGTGCACTTTGGCATTTGCACGGTGTCTTCCCCGGACAGCACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289921.8
CDS-3UTR CAA 90 bp CCATTTATTGCTGTGCTGTCCGGGGAAGACACCGTGCAAATGCCAAAGTGCACTACCTGCGCCAGAACCTaGCTGAAGAACTGGAACACC +
Preference number: 5 (lower is better)
Translates to: PFIAVLSGEDTVQMPKCTTCART*LKNWNT
Trigger: GGTGTTCCAGTTCTTCAGCAAGGTTCTGGCGCAGGT...AGTGCACTTTGGCATTTGCACGGTGTCTTCCCCGGACAGCACAGCAATAAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CAA 90 bp ATTGCTGTGCTGTCCGGGGAAGACACCGTGCAAATGCCAAAGTGCACTGAGGAGCAATCACACCATTTATaGCTGTGCTGTCCGGGGAAG +
Preference number: 5 (lower is better)
Translates to: IAVLSGEDTVQMPKCTEEQSHHL*LCCPGK
Trigger: CTTCCCCGGACAGCACAGCAATAAATGGTGTGATTG...CTCCTCAGTGCACTTTGGCATTTGCACGGTGTCTTCCCCGGACAGCACAGCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CAA 90 bp CCATTTATTGCTGTGCTGTCCGGGGAAGACACCGTGCAAATGCCAAAGTGCACTGGAATGTCTGTCTTCTaGGCGGGGGTGCTTTCATCT +
Preference number: 5 (lower is better)
Translates to: PFIAVLSGEDTVQMPKCTGMSVF*AGVLSS
Trigger: AGATGAAAGCACCCCCGCCAAGAAGACAGACATTCC...AGTGCACTTTGGCATTTGCACGGTGTCTTCCCCGGACAGCACAGCAATAAATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS-3UTR CAA 90 bp AGGGCAGTGGGTTCTCCGCATGCTTTCTTCCTACCTACAATCTTTTTACCTTCCGGAATGTCTGTCTTCTaGGCGGGGGTGCTTTCATCT +
Preference number: 5 (lower is better)
Translates to: RAVGSPHAFFLPTIFLPSGMSVF*AGVLSS
Trigger: AGATGAAAGCACCCCCGCCAAGAAGACAGACATTCC...GGAAGGTAAAAAGATTGTAGGTAGGAAGAAAGCATGCGGAGAACCCACTGCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000427751.5
CDS CCA 90 bp CAAGCCAATTCGCTTCTCCGTGCCTTACTTTCCATGTCTGAGAAATaGGAGTATCAACCTCGCCTACCTCACGAAGTAGTACGTGTTAGC +
Preference number: 5 (lower is better)
Translates to: QANSLLRALLSMSEK*EYQPRLPHEVVRVS
Trigger: GCTAACACGTACTACTTCGTGAGGTAGGCGAGGTTGATACTCCCATTTCTCAGACATGGAAAGTAAGGCACGGAGAAGCGAATTGGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491733.2
CDS CCA 90 bp CTGTCTGGGAGAGGTGGGGGAAGACAGCTGCTGGCAACTGGGAAATaGAAGTTTACAGTGAATGCTTCAATATTTAAGAAGACAAAAGTC +
Preference number: 5 (lower is better)
Translates to: LSGRGGGRQLLATGK*KFTVNASIFKKTKV
Trigger: GACTTTTGTCTTCTTAAATATTGAAGCATTCACTGTAAACTTCCATTTCCCAGTTGCCAGCAGCTGTCTTCCCCCACCTCTCCCAGACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488968.1
CDS TCA 72 bp TGGACCGGCAGGGCCTGCACTTCCCACGTCCCGGGGTaGCGGGAAGGGCGTCCTGCACCCCAACAAGGTCCT +
Preference number: 6 (lower is better)
Translates to: WTGRACTSHVPG*REGRPAPQQGP
Trigger: AGGACCTTGTTGGGGTGCAGGACGCCCTTCCCGTCACCCCGGGACGTGGGAAGTGCAGGCCCTGCCGGTCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427751.5
CDS GCA 72 bp GGTGTGGAGGCGCTCCCGGCTCACCCTGCTCTCCCCTaGTTGTGGGACCCCATCTCCCTCCCTGACTGGACC +
Preference number: 6 (lower is better)
Translates to: GVEALPAHPALP*LWDPISLPDWT
Trigger: GGTCCAGTCAGGGAGGGAGATGGGGTCCCACAAGCAGGGGAGAGCAGGGTGAGCCGGGAGCGCCTCCACACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477614.1
CDS GCA 72 bp CCTTCCAGTGCTCCACGAAGGCCTGCAGCAGGTCAATaGTGGGCTCGCGCGCCCCCACGGCTTCCTGCAGCA +
Preference number: 6 (lower is better)
Translates to: PSSAPRRPAAGQ*WARAPPRLPAA
Trigger: TGCTGCAGGAAGCCGTGGGGGCGCGCGAGCCCAGCATTGACCTGCTGCAGGCCTTCGTGGAGCACTGGAAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289921.8
ENST00000450006.7
ENST00000488968.1
ENST00000498344.2
CDS GCA 72 bp CAACAAGGTCCTGGAGTTGTCGCCCCCACGGCTTCCTaGAGCAGCGCCCCGAGCCGGCTCAGCATGATGGCG +
Preference number: 6 (lower is better)
Translates to: QQGPGVVAPTAS*SSAPSRLSMMA
Trigger: CGCCATCATGCTGAGCCGGCTCGGGGCGCTGCTGCAGGAAGCCGTGGGGGCGACAACTCCAGGACCTTGTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427751.5
CDS CAA 90 bp GTCTGGTGGTCCAGCTGCTCCCCAGGAGCCTGGCCCGTCAACTGCTaGCGCACCAGGAGCAGCTTGCCTGGGAACTGGGGTACCCTCTGG +
Preference number: 6 (lower is better)
Translates to: VWWSSCSPGAWPVNC*RTRSSLPGNWGTLW
Trigger: CCAGAGGGTACCCCAGTTCCCAGGCAAGCTGCTCCTGGTGCGCAAGCAGTTGACGGGCCAGGCTCCTGGGGAGCAGCTGGACCACCAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289921.8
ENST00000450006.7
ENST00000496599.3
ENST00000523633.1
CDS GCA 72 bp GGGTCAGAGGCCAGCCCCAGGAGGCGACGCGGGAGCTaGACTCCTGGAACAGGCCATAAGCATCGTGGACGT +
Preference number: 6 (lower is better)
Translates to: GSEASPRRRRGS*TPGTGHKHRGR
Trigger: ACGTCCACGATGCTTATGGCCTGTTCCAGGAGTGCAGCTCCCGCGTCGCCTCCTGGGGCTGGCCTCTGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289921.8
ENST00000450006.7
ENST00000477614.1
ENST00000496599.3
CDS GCA 72 bp CCAGCTGCTCCCCAGGAGCCTGGCCCGTCAACTGCTTaGGCACCAGGAGCAGCTTGCCTGGGAACTGGGGTA +
Preference number: 6 (lower is better)
Translates to: PAAPQEPGPSTA*APGAACLGTGV
Trigger: TACCCCAGTTCCCAGGCAAGCTGCTCCTGGTGCGCAAGCAGTTGACGGGCCAGGCTCCTGGGGAGCAGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289921.8
ENST00000450006.7
ENST00000496599.3
ENST00000523633.1
CDS GCA 72 bp TGGTCCAGCTGCTCCCCAGGAGCCTGGCCCGTCAACTaGTTGCGCACCAGGAGCAGCTTGCCTGGGAACTGG +
Preference number: 6 (lower is better)
Translates to: WSSCSPGAWPVN*LRTRSSLPGNW
Trigger: CCAGTTCCCAGGCAAGCTGCTCCTGGTGCGCAAGCAGTTGACGGGCCAGGCTCCTGGGGAGCAGCTGGACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289921.8
ENST00000450006.7
ENST00000496599.3
ENST00000523633.1
CDS GCA 72 bp CCTTCCAGTGCTCCACGAAGGCCTGCAGCAGGTCAATaGTGGGCTCGCGCCTTCGTGGGGACTTGGACCGGC +
Preference number: 6 (lower is better)
Translates to: PSSAPRRPAAGQ*WARAFVGTWTG
Trigger: GCCGGTCCAAGTCCCCACGAAGGCGCGAGCCCAGCATTGACCTGCTGCAGGCCTTCGTGGAGCACTGGAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427751.5
CDS CCA 72 bp AGGAGGGTCTGGTGGTCCAGCTGCTCCCCAGGAGCCTaGCCCGTCAACTGCTTGCGCACCAGGAGCAGCTTG +
Preference number: 6 (lower is better)
Translates to: RRVWWSSCSPGA*PVNCLRTRSSL
Trigger: CAAGCTGCTCCTGGTGCGCAAGCAGTTGACGGGCCAGGCTCCTGGGGAGCAGCTGGACCACCAGACCCTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289921.8
ENST00000450006.7
ENST00000496599.3
ENST00000523633.1
CDS CAA 72 bp TCCAGCTGCTCCCCAGGAGCCTGGCCCGTCAACTGCTaGCGCACCAGGAGCAGCTTGCCTGGGAACTGGGGT +
Preference number: 6 (lower is better)
Translates to: SSCSPGAWPVNC*RTRSSLPGNWG
Trigger: ACCCCAGTTCCCAGGCAAGCTGCTCCTGGTGCGCAAGCAGTTGACGGGCCAGGCTCCTGGGGAGCAGCTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289921.8
ENST00000450006.7
ENST00000496599.3
ENST00000523633.1
CDS CCA 72 bp AGGAAGTGGCCCTCGAAGAAAGGTCGCTCGGGCTCATaGGGGTCCAAAGGTGTGGGGGTCAGAGGCCAGCCC +
Preference number: 6 (lower is better)
Translates to: RKWPSKKGRSGS*GSKGVGVRGQP
Trigger: GGGCTGGCCTCTGACCCCCACACCTTTGGACCCCCATGAGCCCGAGCGACCTTTCTTCGAGGGCCACTTCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289921.8
ENST00000450006.7
ENST00000477614.1
ENST00000496599.3
CDS CAA 90 bp TCCCCAGGAGCCTGGCCCGTCAACTGCTTGCGCACCAGGAGCAGCTaGCCTGGGAACTGGGGTACCCTCTGGATTCTCTGCATCAAGTCC +
Preference number: 6 (lower is better)
Translates to: SPGAWPVNCLRTRSS*PGNWGTLWILCIKS
Trigger: GGACTTGATGCAGAGAATCCAGAGGGTACCCCAGTTCCCAGGCAAGCTGCTCCTGGTGCGCAAGCAGTTGACGGGCCAGGCTCCTGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289921.8
ENST00000450006.7
ENST00000496599.3
ENST00000523633.1
CDS GCA 72 bp AGGAAGACAGGCATGGACCGGTACAACTGGCAAAGGTaGCGGACGATCGCAGGGCAGCAGGCGCTGCTCTGT +
Preference number: 6 (lower is better)
Translates to: RKTGMDRYNWQR*RTIAGQQALLC
Trigger: ACAGAGCAGCGCCTGCTGCCCTGCGATCGTCCGGCACCTTTGCCAGTTGTACCGGTCCATGCCTGTCTTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289921.8
ENST00000450006.7
ENST00000464226.2
CDS GCA 72 bp CCTGGCCCGTCAACTGCTTGCGCACCAGGAGCAGCTTaGCTGGGAACTGGGGTACCCTCTGGATTCTCTGCA +
Preference number: 6 (lower is better)
Translates to: PGPSTACAPGAA*LGTGVPSGFSA
Trigger: TGCAGAGAATCCAGAGGGTACCCCAGTTCCCAGGCAAGCTGCTCCTGGTGCGCAAGCAGTTGACGGGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289921.8
ENST00000450006.7
ENST00000496599.3
ENST00000523633.1
CDS GCA 72 bp TACTGGCACCTAGTGGGTAGAGGCCAGAATTACTGCTaGACATCCCACACCGCCCAGGACAGCCCCGCGCAG +
Preference number: 6 (lower is better)
Translates to: YWHLVGRGQNYC*TSHTAQDSPAQ
Trigger: CTGCGCGGGGCTGTCCTGGGCGGTGTGGGATGTGCAGCAGTAATTCTGGCCTCTACCCACTAGGTGCCAGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488968.1
CDS GCA 72 bp TGCTACTGGCACCTAGTGGGTAGAGGCCAGAATTACTaGTGCACATCCCACACCGCCCAGGACAGCCCCGCG +
Preference number: 6 (lower is better)
Translates to: CYWHLVGRGQNY*CTSHTAQDSPA
Trigger: CGCGGGGCTGTCCTGGGCGGTGTGGGATGTGCAGCAGTAATTCTGGCCTCTACCCACTAGGTGCCAGTAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488968.1
CDS CCA 72 bp ATCCGGGACATGCGGTCAAACAGCACTCGGAGGAAGTaGCCCTCGAAGAAAGGTCGCTCGGGCTCATGGGGG +
Preference number: 6 (lower is better)
Translates to: IRDMRSNSTRRK*PSKKGRSGSWG
Trigger: CCCCCATGAGCCCGAGCGACCTTTCTTCGAGGGCCACTTCCTCCGAGTGCTGTTTGACCGCATGTCCCGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289921.8
ENST00000450006.7
ENST00000477614.1
ENST00000496599.3
CDS CAA 72 bp CCGAAGCAGAGGCAACCCTGTGGCCAACCTCTGCTCTaGAAGGACCCCAGAGGCACCAGCCTGGAGTTCTCC +
Preference number: 6 (lower is better)
Translates to: PKQRQPCGQPLL*KDPRGTSLEFS
Trigger: GGAGAACTCCAGGCTGGTGCCTCTGGGGTCCTTCAAGAGCAGAGGTTGGCCACAGGGTTGCCTCTGCTTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477614.1
ENST00000496599.3
CDS CAA 90 bp CGACTCTTCTTGCTCTGGCACAGCCCAAGCAGGGAGGTAATCAGGTaGCTCTCTGTGGTCCCACCGTCCAGCTCCTCGGTCTCAGCAGGC +
Preference number: 6 (lower is better)
Translates to: RLFLLWHSPSREVIR*LSVVPPSSSSVSAG
Trigger: GCCTGCTGAGACCGAGGAGCTGGACGGTGGGACCACAGAGAGCAACCTGATTACCTCCCTGCTTGGGCTGTGCCAGAGCAAGAAGAGTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289921.8
ENST00000450006.7
ENST00000464226.2
ENST00000474579.1
CDS TCA 72 bp GACTGCAGAGCAGCCACTCAGATGCCATCCCCTCAGTaGGCGGTCCTGATGGGACCAGGTGCCAAGGCTTTG +
Preference number: 6 (lower is better)
Translates to: DCRAATQMPSPQ*AVLMGPGAKAL
Trigger: CAAAGCCTTGGCACCTGGTCCCATCAGGACCGCTCACTGAGGGGATGGCATCTGAGTGGCTGCTCTGCAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488968.1
CDS GCA 72 bp AGGACCAGGCTGTGGATGATCCCCTCGTGGGGCTTCTaGAGCAGCTCCTCAAACAGCCGGAGTGTGGTGATG +
Preference number: 6 (lower is better)
Translates to: RTRLWMIPSWGF*SSSSNSRSVVM
Trigger: CATCACCACACTCCGGCTGTTTGAGGAGCTGCTGCAGAAGCCCCACGAGGGGATCATCCACAGCCTGGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289921.8
ENST00000450006.7
ENST00000462914.3
ENST00000491733.2
CDS GCA 72 bp GGGAAGAGGGCAAGCCGGGACAGGACCGAGGTCACCTaGAGGTTCAGGCTGTATGGCTGTAGGAACATGGTG +
Preference number: 6 (lower is better)
Translates to: GKRASRDRTEVT*RFRLYGCRNMV
Trigger: CACCATGTTCCTACAGCCATACAGCCTGAACCTGCAGGTGACCTCGGTCCTGTCCCGGCTTGCCCTCTTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496599.3
CDS CCA 72 bp AGGTGGCAATGTCTGCGGGGTCCAGGAAGACAGGCATaGACCGGTACAACTGGCAAAGGTGCCGGACGATCG +
Preference number: 6 (lower is better)
Translates to: RWQCLRGPGRQA*TGTTGKGAGRS
Trigger: CGATCGTCCGGCACCTTTGCCAGTTGTACCGGTCCATGCCTGTCTTCCTGGACCCCGCAGACATTGCCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289921.8
ENST00000450006.7
ENST00000464226.2
CDS CCA 72 bp TTGAAGGACCCCAGAGGCACCAGCCTGGAGTTCTCCTaGCCCAGGCCCACTAGCTACCTGATCCAGAATCCG +
Preference number: 6 (lower is better)
Translates to: LKDPRGTSLEFS*PRPTSYLIQNP
Trigger: CGGATTCTGGATCAGGTAGCTAGTGGGCCTGGGCCAGGAGAACTCCAGGCTGGTGCCTCTGGGGTCCTTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477614.1
ENST00000496599.3
CDS CCA 72 bp GGGTGGCACCAAAGAACCGAAGCAGAGGCAACCCTGTaGCCAACCTCTGCTCTTGAAGGACCCCAGAGGCAC +
Preference number: 6 (lower is better)
Translates to: GWHQRTEAEATL*PTSALEGPQRH
Trigger: GTGCCTCTGGGGTCCTTCAAGAGCAGAGGTTGGCCACAGGGTTGCCTCTGCTTCGGTTCTTTGGTGCCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496599.3
CDS CAA 72 bp GGAGCACCCCCTAGCTTTCCTTTAAGGAACAGGAGCTaGAGTAGGGCGGCCTGCCCCACGCACTTCCAACCC +
Preference number: 6 (lower is better)
Translates to: GAPPSFPLRNRS*SRAACPTHFQP
Trigger: GGGTTGGAAGTGCGTGGGGCAGGCCGCCCTACTCAAGCTCCTGTTCCTTAAAGGAAAGCTAGGGGGTGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488968.1
CDS CAA 90 bp TCAGTGAGCGGTCCTGATGGGACCAGGTGCCAAGGCTTTGGCTCTTaGGGGTGTCAGCTTGGAGAGAGGGACCCAGGCATGTTACCCACC +
Preference number: 6 (lower is better)
Translates to: SVSGPDGTRCQGFGS*GCQLGERDPGMLPT
Trigger: GGTGGGTAACATGCCTGGGTCCCTCTCTCCAAGCTGACACCCCAAAGAGCCAAAGCCTTGGCACCTGGTCCCATCAGGACCGCTCACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488968.1
CDS TCA 72 bp GCCTGGAGTTCTCCTGGCCCAGGCCCACTAGCTACCTaGTCCAGAATCCGGGACATGCGGTCAAACAGCACT +
Preference number: 6 (lower is better)
Translates to: AWSSPGPGPLAT*SRIRDMRSNST
Trigger: AGTGCTGTTTGACCGCATGTCCCGGATTCTGGATCAGGTAGCTAGTGGGCCTGGGCCAGGAGAACTCCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477614.1
ENST00000496599.3
CDS TCA 72 bp CAGAGCCTGGCACATGGCAGGCCCATCTTTGTGGAGTaGACTGGGAACAGGAGCGCTGGGATGGTGGAGTGT +
Preference number: 6 (lower is better)
Translates to: QSLAHGRPIFVE*TGNRSAGMVEC
Trigger: ACACTCCACCATCCCAGCGCTCCTGTTCCCAGTTCACTCCACAAAGATGGGCCTGCCATGTGCCAGGCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000488968.1
ENST00000498344.2
CDS GCA 72 bp AATCAAACCAGCCCAAGAAGGCAGCCAAGGCCTCCTTaGCAGGGAAGGAAGCCTCATCAGACGGGGCACTGG +
Preference number: 6 (lower is better)
Translates to: NQTSPRRQPRPP*QGRKPHQTGHW
Trigger: CCAGTGCCCCGTCTGATGAGGCTTCCTTCCCTGGCAAGGAGGCCTTGGCTGCCTTCTTGGGCTGGTTTGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289921.8
ENST00000450006.7
ENST00000464226.2
CDS GCA 72 bp CCAGGCTCAGGACACAGTCCTCTGAGAACGCATGCATaGCCAGCCCTTTATCAGGGGGCAGCAGCATCGGTT +
Preference number: 6 (lower is better)
Translates to: PGSGHSPLRTHA*PALYQGAAASV
Trigger: AACCGATGCTGCTGCCCCCTGATAAAGGGCTGGGCATGCATGCGTTCTCAGAGGACTGTGTCCTGAGCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488968.1
CDS CCA 72 bp ACCAGGAGCAGCTTGCCTGGGAACTGGGGTACCCTCTaGATTCTCTGCATCAAGTCCCCGATCACCCTCACC +
Preference number: 6 (lower is better)
Translates to: TRSSLPGNWGTL*ILCIKSPITLT
Trigger: GGTGAGGGTGATCGGGGACTTGATGCAGAGAATCCAGAGGGTACCCCAGTTCCCAGGCAAGCTGCTCCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289921.8
ENST00000450006.7
ENST00000496599.3
CDS CCA 72 bp GCCCGTCAACTGCTTGCGCACCAGGAGCAGCTTGCCTaGGAACTGGGGTACCCTCTGGATTCTCTGCATCAA +
Preference number: 6 (lower is better)
Translates to: ARQLLAHQEQLA*ELGYPLDSLHQ
Trigger: TTGATGCAGAGAATCCAGAGGGTACCCCAGTTCCCAGGCAAGCTGCTCCTGGTGCGCAAGCAGTTGACGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289921.8
ENST00000450006.7
ENST00000496599.3
ENST00000523633.1
CDS CCA 72 bp GTCCTGATGGGACCAGGTGCCAAGGCTTTGGCTCTTTaGGGTGTCAGCTTGGAGAGAGGGACCCAGGCATGT +
Preference number: 6 (lower is better)
Translates to: VLMGPGAKALAL*GVSLERGTQAC
Trigger: ACATGCCTGGGTCCCTCTCTCCAAGCTGACACCCCAAAGAGCCAAAGCCTTGGCACCTGGTCCCATCAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488968.1
CDS CAA 90 bp GCTAGACTTGGAGCACCCCCTAGCTTTCCTTTAAGGAACAGGAGCTaGAGTAGGGCGGCCTGCCCCACGCACTTCCAACCCTTCTGGTCT +
Preference number: 6 (lower is better)
Translates to: ARLGAPPSFPLRNRS*SRAACPTHFQPFWS
Trigger: AGACCAGAAGGGTTGGAAGTGCGTGGGGCAGGCCGCCCTACTCAAGCTCCTGTTCCTTAAAGGAAAGCTAGGGGGTGCTCCAAGTCTAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488968.1
CDS TCA 72 bp GGGAACAGGAGCGCTGGGATGGTGGAGTGTTCTAAGTaGGACAGCCACAGTGCCCGTCCTGTTTGCTCCTCT +
Preference number: 6 (lower is better)
Translates to: GNRSAGMVECSK*DSHSARPVCSS
Trigger: AGAGGAGCAAACAGGACGGGCACTGTGGCTGTCTCACTTAGAACACTCCACCATCCCAGCGCTCCTGTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000488968.1
ENST00000498344.2
CDS GCA 72 bp GGTTCAGGCTGTATGGCTGATCCAGAATCCGGGACATaGGGTCAAACAGCACTCGGAGGAAGTGGCCCTCGA +
Preference number: 6 (lower is better)
Translates to: GSGCMADPESGT*GQTALGGSGPR
Trigger: TCGAGGGCCACTTCCTCCGAGTGCTGTTTGACCGCATGTCCCGGATTCTGGATCAGCCATACAGCCTGAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289921.8
ENST00000450006.7
CDS GCA 72 bp AGCTTGCCTGGGAACTGGGGTACCCTCTGGATTCTCTaGATCAAGTCCCCGATCACCCTCACCAACACGGAG +
Preference number: 6 (lower is better)
Translates to: SLPGNWGTLWIL*IKSPITLTNTE
Trigger: CTCCGTGTTGGTGAGGGTGATCGGGGACTTGATGCAGAGAATCCAGAGGGTACCCCAGTTCCCAGGCAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289921.8
ENST00000450006.7
ENST00000496599.3
CDS GCA 72 bp CACAGTGCCCGTCCTGTTTGCTCCTCTCGCCCGAACTaGCACTTTCAGTGTCAGGACTGGGAAGAGCATAGG +
Preference number: 6 (lower is better)
Translates to: HSARPVCSSRPN*HFQCQDWEEHR
Trigger: CCTATGCTCTTCCCAGTCCTGACACTGAAAGTGGCAGTTCGGGCGAGAGGAGCAAACAGGACGGGCACTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000488968.1
ENST00000498344.2
CDS CAA 72 bp GGGGAGACGTTCTGGCGAGGATCATGTGGGGGAAACTaGACGAAGGCAATGGCAGCCAGCTCCTTGCAGAAC +
Preference number: 6 (lower is better)
Translates to: GETFWRGSCGGN*TKAMAASSLQN
Trigger: GTTCTGCAAGGAGCTGGCTGCCATTGCCTTCGTCAAGTTTCCCCCACATGATCCTCGCCAGAACGTCTCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289921.8
ENST00000450006.7
ENST00000496599.3
ENST00000523633.1
CDS TCA 72 bp GGTCTAGCAGAACCCTCAGAGGGTCCCACAGATTTCTaGATTTCCTGGGCTGGCCCGGGCTGGAAAGAAAGC +
Preference number: 6 (lower is better)
Translates to: GLAEPSEGPTDF*ISWAGPGWKES
Trigger: GCTTTCTTTCCAGCCCGGGCCAGCCCAGGAAATTCAGAAATCTGTGGGACCCTCTGAGGGTTCTGCTAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488968.1
CDS TCA 72 bp TCACGTGATGTGTGTGTGTCATGGATTCCATGGGGCTaGGGGCCAGAACGTGTTAGGACGTGTGGAGCAGGG +
Preference number: 6 (lower is better)
Translates to: SRDVCVSWIPWG*GPERVRTCGAG
Trigger: CCCTGCTCCACACGTCCTAACACGTTCTGGCCCTCAGCCCCATGGAATCCATGACACACACACATCACGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496599.3
CDS GCA 72 bp AGACCTTCCTGGTTGTCCCAATTCGGGGGTGGGGTGTaGTACTGGCACCTAGTGGGTAGAGGCCAGAATTAC +
Preference number: 6 (lower is better)
Translates to: RPSWLSQFGGGV*YWHLVGRGQNY
Trigger: GTAATTCTGGCCTCTACCCACTAGGTGCCAGTAGCACACCCCACCCCCGAATTGGGACAACCAGGAAGGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488968.1
CDS GCA 72 bp TTTCCTTTAAGGAACAGGAGCTTGAGTAGGGCGGCCTaGCCCACGCACTTCCAACCCTTCTGGTCTAGGGAC +
Preference number: 6 (lower is better)
Translates to: FPLRNRSLSRAA*PTHFQPFWSRD
Trigger: GTCCCTAGACCAGAAGGGTTGGAAGTGCGTGGGGCAGGCCGCCCTACTCAAGCTCCTGTTCCTTAAAGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488968.1
CDS TCA 72 bp GGAAGGCTCCAGGTCCAATGCCAACTGTGCCAAGATTaGGAAACCTGGTCTAGCAGAACCCTCAGAGGGTCC +
Preference number: 6 (lower is better)
Translates to: GRLQVQCQLCQD*ETWSSRTLRGS
Trigger: GGACCCTCTGAGGGTTCTGCTAGACCAGGTTTCTCAATCTTGGCACAGTTGGCATTGGACCTGGAGCCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488968.1
CDS TCA 72 bp AGACAAAAGTCCTTCCAGGCTCAGGACACAGTCCTCTaGGAACGCATGCATGCCCAGCCCTTTATCAGGGGG +
Preference number: 6 (lower is better)
Translates to: RQKSFQAQDTVL*ERMHAQPFIRG
Trigger: CCCCCTGATAAAGGGCTGGGCATGCATGCGTTCTCAGAGGACTGTGTCCTGAGCCTGGAAGGACTTTTGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488968.1
CDS TCA 72 bp ACAAGGGTGAGTAGGGTAAAGAGGGGCACCCCGGCTTaGAAACTTCACCCTCTCCTGCCAAAGCCCAGAAAG +
Preference number: 6 (lower is better)
Translates to: TRVSRVKRGTPA*KLHPLLPKPRK
Trigger: CTTTCTGGGCTTTGGCAGGAGAGGGTGAAGTTTTCAAGCCGGGGTGCCCCTCTTTACCCTACTCACCCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488968.1
CDS TCA 72 bp ACAGGCACGCATCACCATGCCTGGCTCTTGTCAGTATaGATCCCTGCTGTGTCCCCAGCATCTAGAGCAGAG +
Preference number: 6 (lower is better)
Translates to: TGTHHHAWLLSV*IPAVSPASRAE
Trigger: CTCTGCTCTAGATGCTGGGGACACAGCAGGGATTCATACTGACAAGAGCCAGGCATGGTGATGCGTGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000488968.1
ENST00000498344.2
CDS CCA 72 bp GATATGGTTACCTGGCAACCAGTCCGTATCCACCCATaGCAGCCTCATGACTGCAGAGCAGCCACTCAGATG +
Preference number: 6 (lower is better)
Translates to: DMVTWQPVRIHP*QPHDCRAATQM
Trigger: CATCTGAGTGGCTGCTCTGCAGTCATGAGGCTGCCATGGGTGGATACGGACTGGTTGCCAGGTAACCATATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488968.1
CDS CCA 72 bp CTCAGAGGGTCCCACAGATTTCTGAATTTCCTGGGCTaGCCCGGGCTGGAAAGAAAGCCTGTAGGAAAGGTG +
Preference number: 6 (lower is better)
Translates to: LRGSHRFLNFLG*PGLERKPVGKV
Trigger: CACCTTTCCTACAGGCTTTCTTTCCAGCCCGGGCCAGCCCAGGAAATTCAGAAATCTGTGGGACCCTCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488968.1
CDS TCA 72 bp GCCTTGGCATGGCTAACCCAGATAAGAAAAGACCTCTaGGGCAGAGTCACCTCCCTTGGCTGGATGCTAAGG +
Preference number: 6 (lower is better)
Translates to: ALAWLTQIRKDL*GRVTSLGWMLR
Trigger: CCTTAGCATCCAGCCAAGGGAGGTGACTCTGCCTCAGAGGTCTTTTCTTATCTGGGTTAGCCATGCCAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491733.2
CDS CAA 90 bp AGGATATCCAGCATCTGCTTCAGCCGCCAGGGAATGTCTGTCTTCTaGGCGGGGGTGCTTTCATCTAATGATGTTTGGGAAACAAGGGTG +
Preference number: 6 (lower is better)
Translates to: RISSICFSRQGMSVF*AGVLSSNDVWETRV
Trigger: CACCCTTGTTTCCCAAACATCATTAGATGAAAGCACCCCCGCCAAGAAGACAGACATTCCCTGGCGGCTGAAGCAGATGCTGGATATCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488968.1
CDS TCA 72 bp AAGTGGTTCAGACTGCCTAACTTGCTCCCCACCTGTTaGCGATCTCGGTCACTGCTGTTTTGCCATCGTAAC +
Preference number: 6 (lower is better)
Translates to: KWFRLPNLLPTC*RSRSLLFCHRN
Trigger: GTTACGATGGCAAAACAGCAGTGACCGAGATCGTCAACAGGTGGGGAGCAAGTTAGGCAGTCTGAACCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462914.3
ENST00000491733.2
CDS CCA 72 bp GTCTTCTTGGCGGGGGTGCTTTCATCTAATGATGTTTaGGAAACAAGGGTGAGTAGGGTAAAGAGGGGCACC +
Preference number: 6 (lower is better)
Translates to: VFLAGVLSSNDV*ETRVSRVKRGT
Trigger: GGTGCCCCTCTTTACCCTACTCACCCTTGTTTCCCAAACATCATTAGATGAAAGCACCCCCGCCAAGAAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488968.1
CDS CCA 72 bp GCATCTGCTTCAGCCGCCAGGGAATGTCTGTCTTCTTaGCGGGGGTGCTTTCATCTAATGATGTTTGGGAAA +
Preference number: 6 (lower is better)
Translates to: ASASAARECLSS*RGCFHLMMFGK
Trigger: TTTCCCAAACATCATTAGATGAAAGCACCCCCGCCAAGAAGACAGACATTCCCTGGCGGCTGAAGCAGATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488968.1
CDS CAA 72 bp AGCATCTGCTTCAGCCGCCAGGGAATGTCTGTCTTCTaGGCGGGGGTGCTTTCATCTAATGATGTTTGGGAA +
Preference number: 6 (lower is better)
Translates to: SICFSRQGMSVF*AGVLSSNDVWE
Trigger: TTCCCAAACATCATTAGATGAAAGCACCCCCGCCAAGAAGACAGACATTCCCTGGCGGCTGAAGCAGATGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488968.1
CDS TCA 72 bp AGCCAATTCGCTTCTCCGTGCCTTACTTTCCATGTCTaGGAAATGGGAGTATCAACCTCGCCTACCTCACGA +
Preference number: 6 (lower is better)
Translates to: SQFASPCLTFHV*EMGVSTSPTSR
Trigger: TCGTGAGGTAGGCGAGGTTGATACTCCCATTTCTCAGACATGGAAAGTAAGGCACGGAGAAGCGAATTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491733.2
CDS GCA 72 bp AGTCTGGGTGGTCCCTGGTATGTGACTAATTTGATGTaGAATTTCAGGCAAGCCAATTCGCTTCTCCGTGCC +
Preference number: 6 (lower is better)
Translates to: SLGGPWYVTNLM*NFRQANSLLRA
Trigger: GGCACGGAGAAGCGAATTGGCTTGCCTGAAATTGCACATCAAATTAGTCACATACCAGGGACCACCCAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491733.2
CDS GCA 72 bp GGTTGTGTCCTTAGGCAGGGCAGTGGGTTCTCCGCATaGTTTCTTCCTACCTACAATCTTTTTACCCTGAAA +
Preference number: 6 (lower is better)
Translates to: GCVLRQGSGFSA*FLPTYNLFTLK
Trigger: TTTCAGGGTAAAAAGATTGTAGGTAGGAAGAAAGCATGCGGAGAACCCACTGCCCTGCCTAAGGACACAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474579.1
CDS CCA 72 bp TCGCTTCTCCGTGCCTTACTTTCCATGTCTGAGAAATaGGAGTATCAACCTCGCCTACCTCACGAAGTAGTA +
Preference number: 6 (lower is better)
Translates to: SLLRALLSMSEK*EYQPRLPHEVV
Trigger: TACTACTTCGTGAGGTAGGCGAGGTTGATACTCCCATTTCTCAGACATGGAAAGTAAGGCACGGAGAAGCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491733.2
CDS CAA 72 bp TCCAGAAGTCTGGGTGGTCCCTGGTATGTGACTAATTaGATGTGCAATTTCAGGCAAGCCAATTCGCTTCTC +
Preference number: 6 (lower is better)
Translates to: SRSLGGPWYVTN*MCNFRQANSLL
Trigger: GAGAAGCGAATTGGCTTGCCTGAAATTGCACATCAAATTAGTCACATACCAGGGACCACCCAGACTTCTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491733.2
CDS CCA 72 bp AGAGGTGGGGGAAGACAGCTGCTGGCAACTGGGAAATaGAAGTTTACAGTGAATGCTTCAATATTTAAGAAG +
Preference number: 6 (lower is better)
Translates to: RGGGRQLLATGK*KFTVNASIFKK
Trigger: CTTCTTAAATATTGAAGCATTCACTGTAAACTTCCATTTCCCAGTTGCCAGCAGCTGTCTTCCCCCACCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488968.1