RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM160A2 (Homo sapiens)

Ensembl gene IDs: ENSG00000051009

Ensembl transcript IDs: ENST00000265978.8, ENST00000449352.7, ENST00000524416.1, ENST00000529360.1, ENST00000532797.1

Found 331 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCCCAGGAGAGCTGACAGAAAACCCAAGACCCAGACAGATAAACTaGACGGAATGGCATAGAGAGTGTTTAGGTGCCTCTCCATACAGG +
Preference number: 1 (lower is better)
Translates to: APGELTENPRPRQIN*TEWHRECLGASPYR
Trigger: CCTGTATGGAGAGGCACCTAAACACTCTCTATGCCATTCCGTCCAGTTTATCTGTCTGGGTCTTGGGTTTTCTGTCAGCTCTCCTGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524416.1
3UTR CCA 90 bp GAGCTGACAGAAAACCCAAGACCCAGACAGATAAACTGGACGGAATaGCATAGAGAGTGTTTAGGTGCCTCTCCATACAGGACAGCACAT +
Preference number: 1 (lower is better)
Translates to: ELTENPRPRQINWTE*HRECLGASPYRTAH
Trigger: ATGTGCTGTCCTGTATGGAGAGGCACCTAAACACTCTCTATGCCATTCCGTCCAGTTTATCTGTCTGGGTCTTGGGTTTTCTGTCAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524416.1
3UTR CAA 90 bp GGAGTTAGTCCAACCACTCAGATCGAGTCTAGCTCCAGGGCATCCTaGAGAGTCCAAATGAACTCAGTCAGGGAGCTCAGGGCCACGCTT +
Preference number: 2 (lower is better)
Translates to: GVSPTTQIESSSRAS*RVQMNSVRELRATL
Trigger: AAGCGTGGCCCTGAGCTCCCTGACTGAGTTCATTTGGACTCTCAAGGATGCCCTGGAGCTAGACTCGATCTGAGTGGTTGGACTAACTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
3UTR-3UTR TCA 90 bp ATCCTTGAGAGTCCAAATGAACTCAGTCAGGGAGCTCAGGGCCACGCTTTGTCAAATCAAGTCCTTCTTTaGAGAGGTGGGGAGGAAGGA +
Preference number: 2 (lower is better)
Translates to: ILESPNELSQGAQGHALSNQVLL*RGGEEG
Trigger: TCCTTCCTCCCCACCTCTTCAAAGAAGGACTTGATT...TGACAAAGCGTGGCCCTGAGCTCCCTGACTGAGTTCATTTGGACTCTCAAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524416.1
3UTR-3UTR CCA 90 bp TTGAGAGTCCAAATGAACTCAGTCAGGGAGCTCAGGGCCACGCTTTGTCATTTGCCCAGACAGATAAACTaGACGGAATGGCATAGAGAG +
Preference number: 2 (lower is better)
Translates to: LRVQMNSVRELRATLCHLPRQIN*TEWHRE
Trigger: CTCTCTATGCCATTCCGTCCAGTTTATCTGTCTGGG...CAAATGACAAAGCGTGGCCCTGAGCTCCCTGACTGAGTTCATTTGGACTCTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
3UTR-3UTR CCA 90 bp AGAGGAGTTAGTCCAACCACTCAGATCGAGTCTAGCTCCAGGGCATCCTTGAGACATACGTCTTCAATATaGTTCAGAAATATTGCTGTG +
Preference number: 2 (lower is better)
Translates to: RGVSPTTQIESSSRASLRHTSSI*FRNIAV
Trigger: CACAGCAATATTTCTGAACCATATTGAAGACGTATG...TCTCAAGGATGCCCTGGAGCTAGACTCGATCTGAGTGGTTGGACTAACTCCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
3UTR CCA 72 bp GAAAACCCAAGACCCAGACAGATAAACTGGACGGAATaGCATAGAGAGTGTTTAGGTGCCTCTCCATACAGG +
Preference number: 3 (lower is better)
Translates to: ENPRPRQINWTE*HRECLGASPYR
Trigger: CCTGTATGGAGAGGCACCTAAACACTCTCTATGCCATTCCGTCCAGTTTATCTGTCTGGGTCTTGGGTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR GCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCTGCACCCCCAGGAGCTaGCCGAGGGCCTTGCCGCTC +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGCTPRS*PRALPL
Trigger: GAGCGGCAAGGCCCTCGGGCAGCTCCTGGGGGTGCA...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR CCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCGGTGGGCTGGGGGCGTaGTGCCGACAACAGCGTGGG +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGGGLGA*CRQQRG
Trigger: CCCACGCTGTTGTCGGCACCACGCCCCCAGCCCACC...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR TCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCGGCGAGGTGACGGCATaGGCCTGGGAGATGGCAGCC +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGGEVTA*AWEMAA
Trigger: GGCTGCCATCTCCCAGGCTCATGCCGTCACCTCGCC...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR GCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCGCTGCCCGAGGGCCTTaGCGCTCCAGGATTCGCACC +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGAARGP*RSRIRT
Trigger: GGTGCGAATCCTGGAGCGGCAAGGCCCTCGGGCAGC...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR GCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCGGGGGCCGAGGGAACTaGACGGTCCTCTGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGGGRGN*TVLCQQ
Trigger: CTGCTGGCAGAGGACCGTGCAGTTCCCTCGGCCCCC...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR GCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCAGGGCATCACGGGCCTaGTGGCCCAGGGTGCCCTCT +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGRASRA*WPRVPS
Trigger: AGAGGGCACCCTGGGCCAGCAGGCCCGTGATGCCCT...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR GCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCCTCTCCAGGCTCCTCTaGAGGGGTAGGCCGTCGGCC +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGLSRLL*RGRPSA
Trigger: GGCCGACGGCCTACCCCTGCAGAGGAGCCTGGAGAG...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR GCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCTGGGGCAGGTCCTGCTaGAGGGCCCTCAGCCCAGTC +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGWGRSC*RALSPV
Trigger: GACTGGGCTGAGGGCCCTGCAGCAGGACCTGCCCCA...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR CCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCACGGAACGCCGAACCTaGCCGGGCCCGGTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGTERRT*PGPVAA
Trigger: AGCAGCAACCGGGCCCGGCCAGGTTCGGCGTTCCGT...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR CCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCCCAGTGCTGGGCTACTaGGCACAGGGCGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGPVLGY*AQGGHR
Trigger: CCTGTGGCCGCCCTGTGCCCAGTAGCCCAGCACTGG...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR CCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCGCATCACGGGCCTGCTaGCCCAGGGTGCCCTCTCGA +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGASRAC*PRVPSR
Trigger: TCGAGAGGGCACCCTGGGCCAGCAGGCCCGTGATGC...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR CCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCATGCTCTGGACGAGGTaGGCTGGGGGCGTGGTGCCG +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGMLWTR*AGGVVP
Trigger: CGGCACCACGCCCCCAGCCCACCTCGTCCAGAGCAT...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR CCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCGCCGTCGGCCAGGGCTaGAGGCGGGGGATGCAGAAA +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGAVGQG*RRGMQK
Trigger: TTTCTGCATCCCCCGCCTCCAGCCCTGGCCGACGGC...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR CCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCCGAAGAGCCTCACCTTaGCGTTCAGGGGCCCCGCCC +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGRRASP*RSGAPP
Trigger: GGGCGGGGCCCCTGAACGCCAAGGTGAGGCTCTTCG...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR TCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCCCCACCTCGTGCCCATaGGGCATGCTCTGGACGAGG +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGPTSCP*GMLWTR
Trigger: CCTCGTCCAGAGCATGCCTCATGGGCACGAGGTGGG...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265978.8
CDS-3UTR TCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCCCGTCTCGCCCAGGCTaGAGGACCAATTGTGCCGCC +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGPSRPG*RTNCAA
Trigger: GGCGGCACAATTGGTCCTTCAGCCTGGGCGAGACGG...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR TCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCGGGCCCCGCCCCGGGTaGGTAGAACTGGAGTTGAAG +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGGPRPG*VELELK
Trigger: CTTCAACTCCAGTTCTACTCACCCGGGGCGGGGCCC...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR TCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCGAGGGGCCCACAGCCTaGGATGAGAGGGCCAGATCC +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGEGPTA*DERARS
Trigger: GGATCTGGCCCTCTCATCTCAGGCTGTGGGCCCCTC...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR GCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCGGGCTGGGGGCGTGGTaGCGACAACAGCGTGGGATT +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGGLGAW*RQQRGI
Trigger: AATCCCACGCTGTTGTCGGCACCACGCCCCCAGCCC...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR CCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCGGGATCAGAACGGCGTaGGGCAGGTCCTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGGIRTA*GRSCCR
Trigger: CCTGCAGCAGGACCTGCCCCACGCCGTTCTGATCCC...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR CCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCCTGCCGGGCCCTGGTTaGACTGTGTGCATGCCGCAG +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGLPGPG*TVCMPQ
Trigger: CTGCGGCATGCACACAGTCCAACCAGGGCCCGGCAG...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR TCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCTGCTGCGGTGTTAGGTaGGTTCAGGCCGCCGCCATC +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGCCGVR*VQAAAI
Trigger: GATGGCGGCGGCCTGAACTCACCTAACACCGCAGCA...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR TCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCGGTTGCGCACAGCACTaGGATCGTCTGCACCCCCAG +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGGCAQH*DRLHPQ
Trigger: CTGGGGGTGCAGACGATCTCAGTGCTGTGCGCAACC...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR TCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCGGCTTCCAGGACCCGTaGTGTCCTCCCTTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGGFQDP*CPPFSL
Trigger: CAGGGAGAAGGGAGGACATCACGGGTCCTGGAAGCC...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265978.8
CDS-3UTR TCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCATCCTGGCACTCCATTaGGCTGGGGAGGGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGILALH*AGEGAG
Trigger: ACCTGCCCCCTCCCCAGCTCAATGGAGTGCCAGGAT...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR TCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCGCTCAGGGGGACAGGTaGAGCTCTCGTAGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGAQGDR*SSRRPP
Trigger: AGGAGGCCTACGAGAGCTTCACCTGTCCCCCTGAGC...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR TCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCGGCTTGGCAGCTGGTTaGGAGTCCGCAAAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGGLAAG*ESAKGC
Trigger: GCAGCCCTTTGCGGACTCTCAACCAGCTGCCAAGCC...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR TCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCAGGACCTCGTGCCCATaGGGCATGCTCTGGACGAGG +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGRTSCP*GMLWTR
Trigger: CCTCGTCCAGAGCATGCCTCATGGGCACGAGGTCCT...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449352.7
CDS-3UTR GCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCAGCACTGAGATCGTCTaGACCCCCAGGAGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGSTEIV*TPRSCP
Trigger: CGGGCAGCTCCTGGGGGTGCAGACGATCTCAGTGCT...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR GCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCCGTGCCCATGAGGCATaGTCTGGACGAGGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGRAHEA*SGRGGL
Trigger: CAGCCCACCTCGTCCAGAGCATGCCTCATGGGCACG...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR GCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCACCAATTGTGCCGCCTaGCGGGCCCTGGTTGGACTG +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGTNCAA*RALVGL
Trigger: CAGTCCAACCAGGGCCCGGCAGGCGGCACAATTGGT...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR GCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCCTGAAGGACCAATTGTaGCGCCTGCCGGGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGLKDQL*RLPGPG
Trigger: ACCAGGGCCCGGCAGGCGGCACAATTGGTCCTTCAG...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR CCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCGCCTTCATCCAGTGCTaGGCTACTGGGCACAGGGCG +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGAFIQC*ATGHRA
Trigger: CGCCCTGTGCCCAGTAGCCCAGCACTGGATGAAGGC...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR CCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCCCAGACGAGATGGTGTaGAGGGCCGGGGTACTGTCG +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGPDEMV*RAGVLS
Trigger: CGACAGTACCCCGGCCCTCCACACCATCTCGTCTGG...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR CCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCGAGAGCCAGACGAGATaGTGTGGAGGGCCGGGGTAC +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGESQTR*CGGPGY
Trigger: GTACCCCGGCCCTCCACACCATCTCGTCTGGCTCTC...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR CCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCGGGAGCCAAAAGGACTaGGCTCAGGAGAGGGCCGCT +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGGSQKD*AQERAA
Trigger: AGCGGCCCTCTCCTGAGCCCAGTCCTTTTGGCTCCC...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR TCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCTGGAGATTGGCCCCTTaGGGTATACGGTGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGWRLAP*GIRCPG
Trigger: CCCTGGGCACCGTATACCTCAAGGGGCCAATCTCCA...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR TCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCGCAAGGCAGGACCCATaGCAGGCACCAGGAACCCAT +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGARQDP*QAPGTH
Trigger: ATGGGTTCCTGGTGCCTGTCATGGGTCCTGCCTTGC...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR TCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCCCTGCAGCAGGGACTTaGCACTGGGCTGGAAGACCA +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGPAAGT*HWAGRP
Trigger: TGGTCTTCCAGCCCAGTGTCAAGTCCCTGCTGCAGG...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR TCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCGCCCACAGCCTGAGATaGGAGGGCCAGATCCTTCCT +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGAHSLR*EGQILP
Trigger: AGGAAGGATCTGGCCCTCTCATCTCAGGCTGTGGGC...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR GCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCCCTGCTGGCCCAGGGTaGCCTCTCGATGCACAAAAG +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGPAGPG*PLDAQK
Trigger: CTTTTGTGCATCGAGAGGGCACCCTGGGCCAGCAGG...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR GCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCAGCTCCCGGAGCTCCTaGCCAAAGCCCTCTAGTCCT +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGSSRSS*PKPSSP
Trigger: AGGACTAGAGGGCTTTGGGCAGGAGCTCCGGGAGCT...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR GCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCATAAAAAGGAGCCTGTaGCCTAGCCCCAGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGIKRSL*PSPSPG
Trigger: GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTAT...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR CCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCTGCCGCAACAGTGGCTaGCGAGCTTCGCTCACTAGC +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGCRNSG*RASLTS
Trigger: GCTAGTGAGCGAAGCTCGCCAGCCACTGTTGCGGCA...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR CCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCACCATGCCGCAACAGTaGCTGGCGAGCTTCGCTCAC +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGTMPQQ*LASFAH
Trigger: GTGAGCGAAGCTCGCCAGCCACTGTTGCGGCATGGT...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR CCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCTGTAGCGGCCCACAGTaGGGCTCCCAGCTGACAAAG +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGCSGPQ*GSQLTK
Trigger: CTTTGTCAGCTGGGAGCCCCACTGTGGGCCGCTACA...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR CCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCCGAGGGTGTCGAGGATaGTGTGGGTGTCATGCCGGT +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGRGCRG*CGCHAG
Trigger: ACCGGCATGACACCCACACCATCCTCGACACCCTCG...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR CCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCGGCTGGCTTGGCAGCTaGTTGAGAGTCCGCAAAGGG +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGGWLGS*LRVRKG
Trigger: CCCTTTGCGGACTCTCAACCAGCTGCCAAGCCAGCC...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR CCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCGGGCCAGTGAAGGGCTaGCTTGGCAGCTGGTTGAGA +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGGPVKG*LGSWLR
Trigger: TCTCAACCAGCTGCCAAGCCAGCCCTTCACTGGCCC...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR TCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCCAGAGGCCTACACTCTaGGGATTTGCCAGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGQRPTL*GFASWR
Trigger: CCTCCAGCTGGCAAATCCTCAGAGTGTAGGCCTCTG...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR TCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCACAAGAAAGGCGAGGTaGCGGCATGAGCCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGTRKAR*RHEPGR
Trigger: TCTCCCAGGCTCATGCCGTCACCTCGCCTTTCTTGT...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR GCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCCCCGGGAGGCCAGTCTaGTCAGCCAATTCATCCTCT +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGPGRPV*SANSSS
Trigger: AGAGGATGAATTGGCTGAGCAGACTGGCCTCCCGGG...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR GCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCTCACGAACTGGACCATaGCGCAACAGTGGCTGGCGA +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGSRTGP*RNSGWR
Trigger: TCGCCAGCCACTGTTGCGGCATGGTCCAGTTCGTGA...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR GCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCCAAGCCTTCATCCAGTaGTGGGCTACTGGGCACAGG +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGQAFIQ*WATGHR
Trigger: CCTGTGCCCAGTAGCCCAGCACTGGATGAAGGCTTG...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR GCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCTCCCGTCGCAGACAGTaGCAATCATCCCCTGGAACC +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGSRRRQ*QSSPGT
Trigger: GGTTCCAGGGGATGATTGGCACTGTCTGCGACGGGA...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR GCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCGTCCACACCACGACGTaGCTCACGCAGATACTCCAG +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGVHTTT*LTQILQ
Trigger: CTGGAGTATCTGCGTGAGGCACGTCGTGGTGTGGAC...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR GCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCCCTCTAGTCCTGCCATaGCCTCGGAGATGCCCTCTA +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGPLVLP*PRRCPL
Trigger: TAGAGGGCATCTCCGAGGGCATGGCAGGACTAGAGG...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR GCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCACAGAGCCCAGCACCTaGAGCAGGGACTTGACACTG +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGTEPST*SRDLTL
Trigger: CAGTGTCAAGTCCCTGCTGCAGGTGCTGGGCTCTGT...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR GCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCGGCTTTGGACAGCAGTaGTGGGAAGTCCTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGGFGQQ*WEVLLG
Trigger: TCCCAGGAGGACTTCCCAGCACTGCTGTCCAAAGCC...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR GCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCGTTGGACTGTGTGCATaGCGCAGGAGTAACTCCCCC +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGVGLCA*RRSNSP
Trigger: GGGGGAGTTACTCCTGCGGCATGCACACAGTCCAAC...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR CCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCGGGATCAGCCATGACTaGGGTTTGGAGATTGGCCCC +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGGISHD*GLEIGP
Trigger: GGGGCCAATCTCCAAACCCCAGTCATGGCTGATCCC...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR CCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCCAGAGCCTCACGAACTaGACCATGCCGCAACAGTGG +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGQSLTN*TMPQQW
Trigger: CCACTGTTGCGGCATGGTCCAGTTCGTGAGGCTCTG...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR CCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCGAAGAGTGCAAGGGCTaGCACTCCCAGCCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGEECKG*HSQPVF
Trigger: GAAGACTGGCTGGGAGTGCCAGCCCTTGCACTCTTC...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR CCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCGTGTCGAGGATGGTGTaGGTGTCATGCCGGTGCAAC +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGVSRMV*VSCRCN
Trigger: GTTGCACCGGCATGACACCCACACCATCCTCGACAC...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR CCA 90 bp GCATCCTTGAGAGTCCAAATGAACTCAGTCAGGGAGCTCAGGGCCACGCTTTGTGCCGTCGGCCAGGGCTaGAGGCGGGGGATGCAGAAA +
Preference number: 4 (lower is better)
Translates to: ASLRVQMNSVRELRATLCAVGQG*RRGMQK
Trigger: TTTCTGCATCCCCCGCCTCCAGCCCTGGCCGACGGC...ACAAAGCGTGGCCCTGAGCTCCCTGACTGAGTTCATTTGGACTCTCAAGGATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR CCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCCCAGACGAACCTTCTTaGCCCCCTCAGGCCATGATC +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGPDEPS*PPQAMI
Trigger: GATCATGGCCTGAGGGGGCCAAGAAGGTTCGTCTGG...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR CCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCAGTGAAGGGCTGGCTTaGCAGCTGGTTGAGAGTCCG +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGSEGLA*QLVESP
Trigger: CGGACTCTCAACCAGCTGCCAAGCCAGCCCTTCACT...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR CCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCAGAGGAGTCCACACTTaGGCTTCCAGGACCTCGTGC +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGRGVHT*ASRTSC
Trigger: GCACGAGGTCCTGGAAGCCCAAGTGTGGACTCCTCT...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449352.7
CDS-3UTR TCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCAATTCATCCTCTCCATaGGGCAGGCTGGGCAGGACT +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGNSSSP*GRLGRT
Trigger: AGTCCTGCCCAGCCTGCCTCATGGAGAGGATGAATT...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR TCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCAGTGGGGCTCCCAGCTaGCAAAGCCATGAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGSGAPS*QSHEKK
Trigger: CTTCTTCTCATGGCTTTGTCAGCTGGGAGCCCCACT...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR TCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCACTCCAGGGAACTCATaGAGAGTGCAAGGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGTPGNS*RVQGLA
Trigger: TGCCAGCCCTTGCACTCTTCATGAGTTCCCTGGAGT...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR TCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCGGTTCAGGAGGGTCCTaGAGAGACTCAGAGAGACCA +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGGSGGS*RDSERP
Trigger: TGGTCTCTCTGAGTCTCTTCAGGACCCTCCTGAACC...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR TCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCGGCCACCCATGGCCCTaGTTGTCCATGGAAGAAAGT +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGGHPWP*LSMEES
Trigger: ACTTTCTTCCATGGACAATCAGGGCCATGGGTGGCC...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR GCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCGTAGGAGCCAGTAGCTaGCCATGGAGCCAGAGGTTA +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGVGASS*PWSQRL
Trigger: TAACCTCTGGCTCCATGGGCAGCTACTGGCTCCTAC...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR GCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCGTCAGCAGATCCTCGTaGAGAGCAAACTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGVSRSS*RANSSR
Trigger: CCTGCTGGAGTTTGCTCTGCACGAGGATCTGCTGAC...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR GCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCGGCTCAGGAGGTGGCTaGAGGAAGAACTCGAGCAAT +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGGSGGG*RKNSSN
Trigger: ATTGCTCGAGTTCTTCCTGCAGCCACCTCCTGAGCC...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR GCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCAGGGTGCCCTCTCGATaGACAAAAGGGACAAGGCGA +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGRVPSR*TKGTRR
Trigger: TCGCCTTGTCCCTTTTGTGCATCGAGAGGGCACCCT...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR GCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCGGAACTCATGAAGAGTaGAAGGGCTGGCACTCCCAG +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGGTHEE*KGWHSQ
Trigger: CTGGGAGTGCCAGCCCTTGCACTCTTCATGAGTTCC...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR GCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCTGGGTGTCATGCCGGTaGAACAACAGGAATCGCAGG +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGWVSCR*NNRNRR
Trigger: CCTGCGATTCCTGTTGTTGCACCGGCATGACACCCA...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR GCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCAGAGCCGGGAGTTACTaGCAATACGAGCAACGAGGG +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGRAGSY*QYEQRG
Trigger: CCCTCGTTGCTCGTATTGGCAGTAACTCCCGGCTCT...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR GCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCGACTCAGAGAGACCATaGAGAGCCGGGAGTTACTGC +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGDSERP*RAGSYC
Trigger: GCAGTAACTCCCGGCTCTGCATGGTCTCTCTGAGTC...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR GCA 90 bp AGGGCATCCTTGAGAGTCCAAATGAACTCAGTCAGGGAGCTCAGGGCCACGCTTCGTGCCCATGAGGCATaGTCTGGACGAGGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: RASLRVQMNSVRELRATLRAHEA*SGRGGL
Trigger: CAGCCCACCTCGTCCAGAGCATGCCTCATGGGCACG...AAGCGTGGCCCTGAGCTCCCTGACTGAGTTCATTTGGACTCTCAAGGATGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR CCA 90 bp ATCCTTGAGAGTCCAAATGAACTCAGTCAGGGAGCTCAGGGCCACGCTTTGTCACCAGTGCTGGGCTACTaGGCACAGGGCGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: ILESPNELSQGAQGHALSPVLGY*AQGGHR
Trigger: CCTGTGGCCGCCCTGTGCCCAGTAGCCCAGCACTGG...TGACAAAGCGTGGCCCTGAGCTCCCTGACTGAGTTCATTTGGACTCTCAAGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR CCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCCCAGATAGGCGGTACTaGCGATCATCTCCTCCACAG +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGPDRRY*RSSPPQ
Trigger: CTGTGGAGGAGATGATCGCCAGTACCGCCTATCTGG...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR CCA 90 bp GGCGGGGTAAGCTGGCTCTCATACAAAAACAAAGAGGAGTTAGTCCAACCACTCGGTGGGCTGGGGGCGTaGTGCCGACAACAGCGTGGG +
Preference number: 4 (lower is better)
Translates to: GGVSWLSYKNKEELVQPLGGLGA*CRQQRG
Trigger: CCCACGCTGTTGTCGGCACCACGCCCCCAGCCCACC...GAGTGGTTGGACTAACTCCTCTTTGTTTTTGTATGAGAGCCAGCTTACCCCGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR CCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCAGAGGAGTCCACACTTaGGCTTCCAGGACCCGTGAT +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGRGVHT*ASRTRD
Trigger: ATCACGGGTCCTGGAAGCCCAAGTGTGGACTCCTCT...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265978.8
CDS-3UTR CCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCCCCAGCTCCCTCCTTTaGCACCAGACGAACCTTCTT +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGPSSLL*HQTNLL
Trigger: AAGAAGGTTCGTCTGGTGCCAAAGGAGGGAGCTGGG...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR CCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCGCTGGGAAGTCCTCCTaGGAAGCCGCAAAGTTCTCA +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGAGKSS*EAAKFS
Trigger: TGAGAACTTTGCGGCTTCCCAGGAGGACTTCCCAGC...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR CCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCTTTGGACAGCAGTGCTaGGAAGTCCTCCTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGFGQQC*EVLLGS
Trigger: GCTTCCCAGGAGGACTTCCCAGCACTGCTGTCCAAA...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR TCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCACCACCTGGGACCAGTaGTTCTTGAAGACCATGAGG +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGTTWDQ*FLKTMR
Trigger: CCTCATGGTCTTCAAGAATCACTGGTCCCAGGTGGT...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR TCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCCCGTCAGCAGGAAGTTaGCATAGACGGAGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGPSAGS*HRRSSA
Trigger: TGCAGAACTCCGTCTATGTCAACTTCCTGCTGACGG...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR TCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCACTTGCCACGGGCAATaGGGTACTTCTTGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGTCHGQ*GTSWLW
Trigger: CCAAAGCCAAGAAGTACCTCATTGCCCGTGGCAAGT...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR GCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCAACTGCACGGTCCTCTaGCAGCAGTGTCAACATCTG +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGNCTVL*QQCQHL
Trigger: CAGATGTTGACACTGCTGGCAGAGGACCGTGCAGTT...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR GCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCTCATCCCATTGCAGCTaGCATGTCAACACACGGGTC +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGSSHCS*HVNTRV
Trigger: GACCCGTGTGTTGACATGGCAGCTGCAATGGGATGA...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR GCA 90 bp CAAATGAACTCAGTCAGGGAGCTCAGGGCCACGCTTTGTCATTTGCCTTCAAAGAGGGCATCACGGGCCTaGTGGCCCAGGGTGCCCTCT +
Preference number: 4 (lower is better)
Translates to: QMNSVRELRATLCHLPSKRASRA*WPRVPS
Trigger: AGAGGGCACCCTGGGCCAGCAGGCCCGTGATGCCCT...CTTTGAAGGCAAATGACAAAGCGTGGCCCTGAGCTCCCTGACTGAGTTCATTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR GCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCTCCACAGAGGTCTTGTaGAAGGCAGGACCCATGACA +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGSTEVL*KAGPMT
Trigger: TGTCATGGGTCCTGCCTTGCACAAGACCTCTGTGGA...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR GCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCTACCTGAGAACCAGCTaGAGCAGGACATCCTCACAG +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGYLRTS*SRTSSQ
Trigger: CTGTGAGGATGTCCTGCTGCAGCTGGTTCTCAGGTA...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR GCA 90 bp ACCACTCAGATCGAGTCTAGCTCCAGGGCATCCTTGAGAGTCCAAATGAACTCACTCTCCAGGCTCCTCTaGAGGGGTAGGCCGTCGGCC +
Preference number: 4 (lower is better)
Translates to: TTQIESSSRASLRVQMNSLSRLL*RGRPSA
Trigger: GGCCGACGGCCTACCCCTGCAGAGGAGCCTGGAGAG...TGAGTTCATTTGGACTCTCAAGGATGCCCTGGAGCTAGACTCGATCTGAGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR GCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCAGCCAGTTCCCCCATTaGTCAATGCCACCTCTAGCT +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGSQFPH*SMPPLA
Trigger: AGCTAGAGGTGGCATTGAGCAATGGGGGAACTGGCT...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR CCA 90 bp ACCACTCAGATCGAGTCTAGCTCCAGGGCATCCTTGAGAGTCCAAATGAACTCAACGGAACGCCGAACCTaGCCGGGCCCGGTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: TTQIESSSRASLRVQMNSTERRT*PGPVAA
Trigger: AGCAGCAACCGGGCCCGGCCAGGTTCGGCGTTCCGT...TGAGTTCATTTGGACTCTCAAGGATGCCCTGGAGCTAGACTCGATCTGAGTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR CCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCTATACCAGGCTGGAATaGCAAGCCCAGAGGTCACTG +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGYTRLE*QAQRSL
Trigger: CAGTGACCTCTGGGCTTGCCATTCCAGCCTGGTATA...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR CCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCGAGGTTATACCAGGCTaGAATGGCAAGCCCAGAGGT +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGEVIPG*NGKPRG
Trigger: ACCTCTGGGCTTGCCATTCCAGCCTGGTATAACCTC...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR CCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCCTGGGGTTTGGAGATTaGCCCCTTGAGGTATACGGT +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGLGFGD*PLEVYG
Trigger: ACCGTATACCTCAAGGGGCCAATCTCCAAACCCCAG...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR CCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCCGAACAGCCGGCTTCTaGCTCAGCATAACGTGGTTA +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGRTAGF*LSITWL
Trigger: TAACCACGTTATGCTGAGCCAGAAGCCGGCTGTTCG...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR TCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCAAACACACAGCTGGCTaGGAAGTAGCACCAAGCCTT +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGKHTAG*EVAPSL
Trigger: AAGGCTTGGTGCTACTTCTCAGCCAGCTGTGTGTTT...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR TCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCCAGCTGACAAAGCCATaGGAAGAAGTAGGGCATCAC +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGQLTKP*EEVGHH
Trigger: GTGATGCCCTACTTCTTCTCATGGCTTTGTCAGCTG...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR TCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCATGGAACAAGATACCTaGGAACCAGCTGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGMEQDT*EPAAAG
Trigger: TCCTGCTGCAGCTGGTTCTCAGGTATCTTGTTCCAT...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR TCA 90 bp ATCCTTGAGAGTCCAAATGAACTCAGTCAGGGAGCTCAGGGCCACGCTTTGTCAGCTCAGGGGGACAGGTaGAGCTCTCGTAGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: ILESPNELSQGAQGHALSAQGDR*SSRRPP
Trigger: AGGAGGCCTACGAGAGCTTCACCTGTCCCCCTGAGC...TGACAAAGCGTGGCCCTGAGCTCCCTGACTGAGTTCATTTGGACTCTCAAGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR TCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCGCCAGATCCTTCCTCTaGAGTCTCCAACAAGAAAGG +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGARSFL*SLQQER
Trigger: CCTTTCTTGTTGGAGACTTCAGAGGAAGGATCTGGC...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR GCA 90 bp AGGGAGCTCAGGGCCACGCTTTGTCATTTGCCTTCAAAGAAATTGCACTCTATCGCTGCCCGAGGGCCTTaGCGCTCCAGGATTCGCACC +
Preference number: 4 (lower is better)
Translates to: RELRATLCHLPSKKLHSIAARGP*RSRIRT
Trigger: GGTGCGAATCCTGGAGCGGCAAGGCCCTCGGGCAGC...GATAGAGTGCAATTTCTTTGAAGGCAAATGACAAAGCGTGGCCCTGAGCTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR GCA 90 bp CAGATCGAGTCTAGCTCCAGGGCATCCTTGAGAGTCCAAATGAACTCAGTCAGGAGCACTGAGATCGTCTaGACCCCCAGGAGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: QIESSSRASLRVQMNSVRSTEIV*TPRSCP
Trigger: CGGGCAGCTCCTGGGGGTGCAGACGATCTCAGTGCT...CCTGACTGAGTTCATTTGGACTCTCAAGGATGCCCTGGAGCTAGACTCGATCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR GCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCCCAAGCTCATCCCATTaGAGCTGCCATGTCAACACA +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGPSSSH*SCHVNT
Trigger: TGTGTTGACATGGCAGCTGCAATGGGATGAGCTTGG...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR GCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCTCAAATAGTTTCAGTTaGTCAGCCCGCCGTTCCTCG +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGSNSFS*SARRSS
Trigger: CGAGGAACGGCGGGCTGAGCAACTGAAACTATTTGA...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR GCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCATGGTGTGGGTGTCATaGCGGTGCAACAACAGGAAT +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGMVWVS*RCNNRN
Trigger: ATTCCTGTTGTTGCACCGGCATGACACCCACACCAT...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR CCA 90 bp GCATCCTTGAGAGTCCAAATGAACTCAGTCAGGGAGCTCAGGGCCACGCTTTGTACCATGCCGCAACAGTaGCTGGCGAGCTTCGCTCAC +
Preference number: 4 (lower is better)
Translates to: ASLRVQMNSVRELRATLCTMPQQ*LASFAH
Trigger: GTGAGCGAAGCTCGCCAGCCACTGTTGCGGCATGGT...ACAAAGCGTGGCCCTGAGCTCCCTGACTGAGTTCATTTGGACTCTCAAGGATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR CCA 90 bp GGAGCTCAGGGCCACGCTTTGTCATTTGCCTTCAAAGAAATTGCACTCTATCTGGCATCACGGGCCTGCTaGCCCAGGGTGCCCTCTCGA +
Preference number: 4 (lower is better)
Translates to: GAQGHALSFAFKEIALYLASRAC*PRVPSR
Trigger: TCGAGAGGGCACCCTGGGCCAGCAGGCCCGTGATGC...CAGATAGAGTGCAATTTCTTTGAAGGCAAATGACAAAGCGTGGCCCTGAGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR CCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCGTGCCAATCATCCCCTaGAACCTCAATCTTTCGAGG +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGVPIIP*NLNLSR
Trigger: CCTCGAAAGATTGAGGTTCCAGGGGATGATTGGCAC...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR CCA 90 bp CAGATCGAGTCTAGCTCCAGGGCATCCTTGAGAGTCCAAATGAACTCAGTCAGGGGGAGCCAAAAGGACTaGGCTCAGGAGAGGGCCGCT +
Preference number: 4 (lower is better)
Translates to: QIESSSRASLRVQMNSVRGSQKD*AQERAA
Trigger: AGCGGCCCTCTCCTGAGCCCAGTCCTTTTGGCTCCC...CCTGACTGAGTTCATTTGGACTCTCAAGGATGCCCTGGAGCTAGACTCGATCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR TCA 90 bp ACCACTCAGATCGAGTCTAGCTCCAGGGCATCCTTGAGAGTCCAAATGAACTCAGGTTGCGCACAGCACTaGGATCGTCTGCACCCCCAG +
Preference number: 4 (lower is better)
Translates to: TTQIESSSRASLRVQMNSGCAQH*DRLHPQ
Trigger: CTGGGGGTGCAGACGATCTCAGTGCTGTGCGCAACC...TGAGTTCATTTGGACTCTCAAGGATGCCCTGGAGCTAGACTCGATCTGAGTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR TCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCAGTAGACAGCATTCTTaGCTCGAAGAGCCTCACCTT +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGSRQHS*LEEPHL
Trigger: AAGGTGAGGCTCTTCGAGTCAAGAATGCTGTCTACT...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR GCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCTACACTCTGAGGATTTaGCAGCTGGAGGTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGYTLRI*QLEVFS
Trigger: GGAGAAAACCTCCAGCTGGCAAATCCTCAGAGTGTA...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR GCA 90 bp GAAAACCCAAGACCCAGACAGATAAACTGGACGGAATGGCATAGAGAGTGTTTATGCACCCCCAGGAGCTaGCCGAGGGCCTTGCCGCTC +
Preference number: 4 (lower is better)
Translates to: ENPRPRQINWTEWHRECLCTPRS*PRALPL
Trigger: GAGCGGCAAGGCCCTCGGGCAGCTCCTGGGGGTGCA...TAAACACTCTCTATGCCATTCCGTCCAGTTTATCTGTCTGGGTCTTGGGTTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR GCA 90 bp AATGAACTCAGTCAGGGAGCTCAGGGCCACGCTTTGTCATTTGCCTTCAAAGAAGGGCTGGGGGCGTGGTaGCGACAACAGCGTGGGATT +
Preference number: 4 (lower is better)
Translates to: NELSQGAQGHALSFAFKEGLGAW*RQQRGI
Trigger: AATCCCACGCTGTTGTCGGCACCACGCCCCCAGCCC...TTCTTTGAAGGCAAATGACAAAGCGTGGCCCTGAGCTCCCTGACTGAGTTCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR CCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCAAGCCCAGAGGTCACTaGCCAGTCCAGATTTCTAAA +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGKPRGH*PVQISK
Trigger: TTTAGAAATCTGGACTGGCCAGTGACCTCTGGGCTT...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR CCA 90 bp ACCACTCAGATCGAGTCTAGCTCCAGGGCATCCTTGAGAGTCCAAATGAACTCAGCCTTCATCCAGTGCTaGGCTACTGGGCACAGGGCG +
Preference number: 4 (lower is better)
Translates to: TTQIESSSRASLRVQMNSAFIQC*ATGHRA
Trigger: CGCCCTGTGCCCAGTAGCCCAGCACTGGATGAAGGC...TGAGTTCATTTGGACTCTCAAGGATGCCCTGGAGCTAGACTCGATCTGAGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR CCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCACACAAACACACAGCTaGCTGAGAAGTAGCACCAAG +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGTQTHS*LRSSTK
Trigger: CTTGGTGCTACTTCTCAGCCAGCTGTGTGTTTGTGT...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR TCA 90 bp CAGATCGAGTCTAGCTCCAGGGCATCCTTGAGAGTCCAAATGAACTCAGTCAGGCAGAGGCCTACACTCTaGGGATTTGCCAGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: QIESSSRASLRVQMNSVRQRPTL*GFASWR
Trigger: CCTCCAGCTGGCAAATCCTCAGAGTGTAGGCCTCTG...CCTGACTGAGTTCATTTGGACTCTCAAGGATGCCCTGGAGCTAGACTCGATCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR TCA 90 bp ACCACTCAGATCGAGTCTAGCTCCAGGGCATCCTTGAGAGTCCAAATGAACTCAGCAAGGCAGGACCCATaGCAGGCACCAGGAACCCAT +
Preference number: 4 (lower is better)
Translates to: TTQIESSSRASLRVQMNSARQDP*QAPGTH
Trigger: ATGGGTTCCTGGTGCCTGTCATGGGTCCTGCCTTGC...TGAGTTCATTTGGACTCTCAAGGATGCCCTGGAGCTAGACTCGATCTGAGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR GCA 90 bp CAGATCGAGTCTAGCTCCAGGGCATCCTTGAGAGTCCAAATGAACTCAGTCAGGCAAGCCTTCATCCAGTaGTGGGCTACTGGGCACAGG +
Preference number: 4 (lower is better)
Translates to: QIESSSRASLRVQMNSVRQAFIQ*WATGHR
Trigger: CCTGTGCCCAGTAGCCCAGCACTGGATGAAGGCTTG...CCTGACTGAGTTCATTTGGACTCTCAAGGATGCCCTGGAGCTAGACTCGATCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR GCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCCCTGAATTACTGCATTaGAGAACTCCAGGGAACTCA +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGPELLH*RTPGNS
Trigger: TGAGTTCCCTGGAGTTCTGCAATGCAGTAATTCAGG...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR GCA 90 bp AGTCAGGGAGCTCAGGGCCACGCTTTGTCATTTGCCTTCAAAGAAATTGCACTCAGCTCCCGGAGCTCCTaGCCAAAGCCCTCTAGTCCT +
Preference number: 4 (lower is better)
Translates to: SQGAQGHALSFAFKEIALSSRSS*PKPSSP
Trigger: AGGACTAGAGGGCTTTGGGCAGGAGCTCCGGGAGCT...GAGTGCAATTTCTTTGAAGGCAAATGACAAAGCGTGGCCCTGAGCTCCCTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR CCA 90 bp AGAGGAGTTAGTCCAACCACTCAGATCGAGTCTAGCTCCAGGGCATCCTTGAGAGGGATCAGCCATGACTaGGGTTTGGAGATTGGCCCC +
Preference number: 4 (lower is better)
Translates to: RGVSPTTQIESSSRASLRGISHD*GLEIGP
Trigger: GGGGCCAATCTCCAAACCCCAGTCATGGCTGATCCC...TCTCAAGGATGCCCTGGAGCTAGACTCGATCTGAGTGGTTGGACTAACTCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR CCA 90 bp ATCCTTGAGAGTCCAAATGAACTCAGTCAGGGAGCTCAGGGCCACGCTTTGTCAGAAGAGTGCAAGGGCTaGCACTCCCAGCCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: ILESPNELSQGAQGHALSEECKG*HSQPVF
Trigger: GAAGACTGGCTGGGAGTGCCAGCCCTTGCACTCTTC...TGACAAAGCGTGGCCCTGAGCTCCCTGACTGAGTTCATTTGGACTCTCAAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR CCA 90 bp GAAAACCCAAGACCCAGACAGATAAACTGGACGGAATGGCATAGAGAGTGTTTAATGCTCTGGACGAGGTaGGCTGGGGGCGTGGTGCCG +
Preference number: 4 (lower is better)
Translates to: ENPRPRQINWTEWHRECLMLWTR*AGGVVP
Trigger: CGGCACCACGCCCCCAGCCCACCTCGTCCAGAGCAT...TAAACACTCTCTATGCCATTCCGTCCAGTTTATCTGTCTGGGTCTTGGGTTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR CCA 90 bp AATGAACTCAGTCAGGGAGCTCAGGGCCACGCTTTGTCATTTGCCTTCAAAGAAGAGAGCCAGACGAGATaGTGTGGAGGGCCGGGGTAC +
Preference number: 4 (lower is better)
Translates to: NELSQGAQGHALSFAFKEESQTR*CGGPGY
Trigger: GTACCCCGGCCCTCCACACCATCTCGTCTGGCTCTC...TTCTTTGAAGGCAAATGACAAAGCGTGGCCCTGAGCTCCCTGACTGAGTTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR CCA 90 bp CAAATGAACTCAGTCAGGGAGCTCAGGGCCACGCTTTGTCATTTGCCTTCAAAGGGCTGGCTTGGCAGCTaGTTGAGAGTCCGCAAAGGG +
Preference number: 4 (lower is better)
Translates to: QMNSVRELRATLCHLPSKGWLGS*LRVRKG
Trigger: CCCTTTGCGGACTCTCAACCAGCTGCCAAGCCAGCC...CTTTGAAGGCAAATGACAAAGCGTGGCCCTGAGCTCCCTGACTGAGTTCATTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
3UTR CAA 72 bp CCAACCACTCAGATCGAGTCTAGCTCCAGGGCATCCTaGAGAGTCCAAATGAACTCAGTCAGGGAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: PTTQIESSSRAS*RVQMNSVRELR
Trigger: CCTGAGCTCCCTGACTGAGTTCATTTGGACTCTCAAGGATGCCCTGGAGCTAGACTCGATCTGAGTGGTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR TCA 90 bp ATCGAGTCTAGCTCCAGGGCATCCTTGAGAGTCCAAATGAACTCAGTCAGGGAGGGTTCAGGAGGGTCCTaGAGAGACTCAGAGAGACCA +
Preference number: 4 (lower is better)
Translates to: IESSSRASLRVQMNSVREGSGGS*RDSERP
Trigger: TGGTCTCTCTGAGTCTCTTCAGGACCCTCCTGAACC...CTCCCTGACTGAGTTCATTTGGACTCTCAAGGATGCCCTGGAGCTAGACTCGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR TCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCGAAATTCAGGGAAAATaGCTGCACAGTAGACAGCAT +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGEIQGK*LHSRQH
Trigger: ATGCTGTCTACTGTGCAGTCATTTTCCCTGAATTTC...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR GCA 90 bp AAAGCGAACAGGAAAAACTTGAAATCAAGTCCTTCTTTGAAGAGGTGGGGAGGAGGGGGCCGAGGGAACTaGACGGTCCTCTGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: KANRKNLKSSPSLKRWGGGGRGN*TVLCQQ
Trigger: CTGCTGGCAGAGGACCGTGCAGTTCCCTCGGCCCCC...TCCTCCCCACCTCTTCAAAGAAGGACTTGATTTCAAGTTTTTCCTGTTCGCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR GCA 90 bp ATCCTTGAGAGTCCAAATGAACTCAGTCAGGGAGCTCAGGGCCACGCTTTGTCAAGGGTGCCCTCTCGATaGACAAAAGGGACAAGGCGA +
Preference number: 4 (lower is better)
Translates to: ILESPNELSQGAQGHALSRVPSR*TKGTRR
Trigger: TCGCCTTGTCCCTTTTGTGCATCGAGAGGGCACCCT...TGACAAAGCGTGGCCCTGAGCTCCCTGACTGAGTTCATTTGGACTCTCAAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR GCA 90 bp AATGAACTCAGTCAGGGAGCTCAGGGCCACGCTTTGTCATTTGCCTTCAAAGAACCTGCTGGCCCAGGGTaGCCTCTCGATGCACAAAAG +
Preference number: 4 (lower is better)
Translates to: NELSQGAQGHALSFAFKEPAGPG*PLDAQK
Trigger: CTTTTGTGCATCGAGAGGGCACCCTGGGCCAGCAGG...TTCTTTGAAGGCAAATGACAAAGCGTGGCCCTGAGCTCCCTGACTGAGTTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR GCA 90 bp GGCGGGGTAAGCTGGCTCTCATACAAAAACAAAGAGGAGTTAGTCCAACCACTCTCCCGTCGCAGACAGTaGCAATCATCCCCTGGAACC +
Preference number: 4 (lower is better)
Translates to: GGVSWLSYKNKEELVQPLSRRRQ*QSSPGT
Trigger: GGTTCCAGGGGATGATTGGCACTGTCTGCGACGGGA...GAGTGGTTGGACTAACTCCTCTTTGTTTTTGTATGAGAGCCAGCTTACCCCGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR GCA 90 bp ATCGAGTCTAGCTCCAGGGCATCCTTGAGAGTCCAAATGAACTCAGTCAGGGAGGACTCAGAGAGACCATaGAGAGCCGGGAGTTACTGC +
Preference number: 4 (lower is better)
Translates to: IESSSRASLRVQMNSVREDSERP*RAGSYC
Trigger: GCAGTAACTCCCGGCTCTGCATGGTCTCTCTGAGTC...CTCCCTGACTGAGTTCATTTGGACTCTCAAGGATGCCCTGGAGCTAGACTCGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR CCA 90 bp ACCACTCAGATCGAGTCTAGCTCCAGGGCATCCTTGAGAGTCCAAATGAACTCACAGAGCCTCACGAACTaGACCATGCCGCAACAGTGG +
Preference number: 4 (lower is better)
Translates to: TTQIESSSRASLRVQMNSQSLTN*TMPQQW
Trigger: CCACTGTTGCGGCATGGTCCAGTTCGTGAGGCTCTG...TGAGTTCATTTGGACTCTCAAGGATGCCCTGGAGCTAGACTCGATCTGAGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR CCA 90 bp TTGAGAGTCCAAATGAACTCAGTCAGGGAGCTCAGGGCCACGCTTTGTCATTTGGTGTCGAGGATGGTGTaGGTGTCATGCCGGTGCAAC +
Preference number: 4 (lower is better)
Translates to: LRVQMNSVRELRATLCHLVSRMV*VSCRCN
Trigger: GTTGCACCGGCATGACACCCACACCATCCTCGACAC...CAAATGACAAAGCGTGGCCCTGAGCTCCCTGACTGAGTTCATTTGGACTCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR CCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCTGGCTCAGCATAACGTaGTTACATGGAACAAGATAC +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGWLSIT*LHGTRY
Trigger: GTATCTTGTTCCATGTAACCACGTTATGCTGAGCCA...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR CCA 90 bp AACCCAAGACCCAGACAGATAAACTGGACGGAATGGCATAGAGAGTGTTTAGGTCCAGACGAGATGGTGTaGAGGGCCGGGGTACTGTCG +
Preference number: 4 (lower is better)
Translates to: NPRPRQINWTEWHRECLGPDEMV*RAGVLS
Trigger: CGACAGTACCCCGGCCCTCCACACCATCTCGTCTGG...ACCTAAACACTCTCTATGCCATTCCGTCCAGTTTATCTGTCTGGGTCTTGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR CCA 90 bp AGTCAGGGAGCTCAGGGCCACGCTTTGTCATTTGCCTTCAAAGAAATTGCACTCAGTGAAGGGCTGGCTTaGCAGCTGGTTGAGAGTCCG +
Preference number: 4 (lower is better)
Translates to: SQGAQGHALSFAFKEIALSEGLA*QLVESP
Trigger: CGGACTCTCAACCAGCTGCCAAGCCAGCCCTTCACT...GAGTGCAATTTCTTTGAAGGCAAATGACAAAGCGTGGCCCTGAGCTCCCTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR CCA 90 bp ACCACTCAGATCGAGTCTAGCTCCAGGGCATCCTTGAGAGTCCAAATGAACTCAAGAGGAGTCCACACTTaGGCTTCCAGGACCTCGTGC +
Preference number: 4 (lower is better)
Translates to: TTQIESSSRASLRVQMNSRGVHT*ASRTSC
Trigger: GCACGAGGTCCTGGAAGCCCAAGTGTGGACTCCTCT...TGAGTTCATTTGGACTCTCAAGGATGCCCTGGAGCTAGACTCGATCTGAGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR TCA 90 bp CTCAGGGCCACGCTTTGTCATTTGCCTTCAAAGAAATTGCACTCTATCTGCTTATGCTGCGGTGTTAGGTaGGTTCAGGCCGCCGCCATC +
Preference number: 4 (lower is better)
Translates to: LRATLCHLPSKKLHSICLCCGVR*VQAAAI
Trigger: GATGGCGGCGGCCTGAACTCACCTAACACCGCAGCA...TAAGCAGATAGAGTGCAATTTCTTTGAAGGCAAATGACAAAGCGTGGCCCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR GCA 90 bp ACCACTCAGATCGAGTCTAGCTCCAGGGCATCCTTGAGAGTCCAAATGAACTCAGTAGGAGCCAGTAGCTaGCCATGGAGCCAGAGGTTA +
Preference number: 4 (lower is better)
Translates to: TTQIESSSRASLRVQMNSVGASS*PWSQRL
Trigger: TAACCTCTGGCTCCATGGGCAGCTACTGGCTCCTAC...TGAGTTCATTTGGACTCTCAAGGATGCCCTGGAGCTAGACTCGATCTGAGTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR GCA 90 bp AGGGCATCCTTGAGAGTCCAAATGAACTCAGTCAGGGAGCTCAGGGCCACGCTTTACACTCTGAGGATTTaGCAGCTGGAGGTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: RASLRVQMNSVRELRATLYTLRI*QLEVFS
Trigger: GGAGAAAACCTCCAGCTGGCAAATCCTCAGAGTGTA...AAGCGTGGCCCTGAGCTCCCTGACTGAGTTCATTTGGACTCTCAAGGATGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR GCA 90 bp AGAGGAGTTAGTCCAACCACTCAGATCGAGTCTAGCTCCAGGGCATCCTTGAGATCATCCCATTGCAGCTaGCATGTCAACACACGGGTC +
Preference number: 4 (lower is better)
Translates to: RGVSPTTQIESSSRASLRSSHCS*HVNTRV
Trigger: GACCCGTGTGTTGACATGGCAGCTGCAATGGGATGA...TCTCAAGGATGCCCTGGAGCTAGACTCGATCTGAGTGGTTGGACTAACTCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR GCA 90 bp ACCACTCAGATCGAGTCTAGCTCCAGGGCATCCTTGAGAGTCCAAATGAACTCAGGAACTCATGAAGAGTaGAAGGGCTGGCACTCCCAG +
Preference number: 4 (lower is better)
Translates to: TTQIESSSRASLRVQMNSGTHEE*KGWHSQ
Trigger: CTGGGAGTGCCAGCCCTTGCACTCTTCATGAGTTCC...TGAGTTCATTTGGACTCTCAAGGATGCCCTGGAGCTAGACTCGATCTGAGTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR GCA 90 bp AGTCAGGGAGCTCAGGGCCACGCTTTGTCATTTGCCTTCAAAGAAATTGCACTCTGGGTGTCATGCCGGTaGAACAACAGGAATCGCAGG +
Preference number: 4 (lower is better)
Translates to: SQGAQGHALSFAFKEIALWVSCR*NNRNRR
Trigger: CCTGCGATTCCTGTTGTTGCACCGGCATGACACCCA...GAGTGCAATTTCTTTGAAGGCAAATGACAAAGCGTGGCCCTGAGCTCCCTGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR GCA 90 bp GGAGCTCAGGGCCACGCTTTGTCATTTGCCTTCAAAGAAATTGCACTCTATCTGCCTCTAGTCCTGCCATaGCCTCGGAGATGCCCTCTA +
Preference number: 4 (lower is better)
Translates to: GAQGHALSFAFKEIALYLPLVLP*PRRCPL
Trigger: TAGAGGGCATCTCCGAGGGCATGGCAGGACTAGAGG...CAGATAGAGTGCAATTTCTTTGAAGGCAAATGACAAAGCGTGGCCCTGAGCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR GCA 90 bp AGAGGAGTTAGTCCAACCACTCAGATCGAGTCTAGCTCCAGGGCATCCTTGAGAAGCCAGTTCCCCCATTaGTCAATGCCACCTCTAGCT +
Preference number: 4 (lower is better)
Translates to: RGVSPTTQIESSSRASLRSQFPH*SMPPLA
Trigger: AGCTAGAGGTGGCATTGAGCAATGGGGGAACTGGCT...TCTCAAGGATGCCCTGGAGCTAGACTCGATCTGAGTGGTTGGACTAACTCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR GCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCTTCAGGGAAAATGACTaGACAGTAGACAGCATTCTT +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGFREND*TVDSIL
Trigger: AAGAATGCTGTCTACTGTGCAGTCATTTTCCCTGAA...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR CCA 90 bp ATCGAGTCTAGCTCCAGGGCATCCTTGAGAGTCCAAATGAACTCAGTCAGGGAGCTGGGGTTTGGAGATTaGCCCCTTGAGGTATACGGT +
Preference number: 4 (lower is better)
Translates to: IESSSRASLRVQMNSVRELGFGD*PLEVYG
Trigger: ACCGTATACCTCAAGGGGCCAATCTCCAAACCCCAG...CTCCCTGACTGAGTTCATTTGGACTCTCAAGGATGCCCTGGAGCTAGACTCGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR CCA 90 bp AACCCAAGACCCAGACAGATAAACTGGACGGAATGGCATAGAGAGTGTTTAGGTTGCCGCAACAGTGGCTaGCGAGCTTCGCTCACTAGC +
Preference number: 4 (lower is better)
Translates to: NPRPRQINWTEWHRECLGCRNSG*RASLTS
Trigger: GCTAGTGAGCGAAGCTCGCCAGCCACTGTTGCGGCA...ACCTAAACACTCTCTATGCCATTCCGTCCAGTTTATCTGTCTGGGTCTTGGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR CCA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCCATAACGTGGTTACATaGAACAAGATACCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGHNVVT*NKIPEN
Trigger: GTTCTCAGGTATCTTGTTCCATGTAACCACGTTATG...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR CCA 90 bp AGAGGAGTTAGTCCAACCACTCAGATCGAGTCTAGCTCCAGGGCATCCTTGAGATTACCAGTGAAGGGCTaGCTTGGCAGCTGGTTGAGA +
Preference number: 4 (lower is better)
Translates to: RGVSPTTQIESSSRASLRLPVKG*LGSWLR
Trigger: TCTCAACCAGCTGCCAAGCCAGCCCTTCACTGGTAA...TCTCAAGGATGCCCTGGAGCTAGACTCGATCTGAGTGGTTGGACTAACTCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR TCA 90 bp GAAAACCCAAGACCCAGACAGATAAACTGGACGGAATGGCATAGAGAGTGTTTATGGAGATTGGCCCCTTaGGGTATACGGTGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: ENPRPRQINWTEWHRECLWRLAP*GIRCPG
Trigger: CCCTGGGCACCGTATACCTCAAGGGGCCAATCTCCA...TAAACACTCTCTATGCCATTCCGTCCAGTTTATCTGTCTGGGTCTTGGGTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR TCA 90 bp ATCGAGTCTAGCTCCAGGGCATCCTTGAGAGTCCAAATGAACTCAGTCAGGGAGCAGCTGACAAAGCCATaGGAAGAAGTAGGGCATCAC +
Preference number: 4 (lower is better)
Translates to: IESSSRASLRVQMNSVREQLTKP*EEVGHH
Trigger: GTGATGCCCTACTTCTTCTCATGGCTTTGTCAGCTG...CTCCCTGACTGAGTTCATTTGGACTCTCAAGGATGCCCTGGAGCTAGACTCGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR TCA 90 bp AGAGGAGTTAGTCCAACCACTCAGATCGAGTCTAGCTCCAGGGCATCCTTGAGAATGGAACAAGATACCTaGGAACCAGCTGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: RGVSPTTQIESSSRASLRMEQDT*EPAAAG
Trigger: TCCTGCTGCAGCTGGTTCTCAGGTATCTTGTTCCAT...TCTCAAGGATGCCCTGGAGCTAGACTCGATCTGAGTGGTTGGACTAACTCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR TCA 90 bp AAAGCGAACAGGAAAAACTTGAAATCAAGTCCTTCTTTGAAGAGGTGGGGAGGAATCCTGGCACTCCATTaGGCTGGGGAGGGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: KANRKNLKSSPSLKRWGGILALH*AGEGAG
Trigger: ACCTGCCCCCTCCCCAGCTCAATGGAGTGCCAGGAT...TCCTCCCCACCTCTTCAAAGAAGGACTTGATTTCAAGTTTTTCCTGTTCGCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR TCA 90 bp AGGGCCACGCTTTGTCATTTGCCTTCAAAGAAATTGCACTCTATCTGCTTAAGAGGCTTGGCAGCTGGTTaGGAGTCCGCAAAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: RATLCHLPSKKLHSICLRGLAAG*ESAKGC
Trigger: GCAGCCCTTTGCGGACTCTCAACCAGCTGCCAAGCC...TCTTAAGCAGATAGAGTGCAATTTCTTTGAAGGCAAATGACAAAGCGTGGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR TCA 90 bp TCATACAAAAACAAAGAGGAGTTAGTCCAACCACTCAGATCGAGTCTAGCTCCAAGGACCTCGTGCCCATaGGGCATGCTCTGGACGAGG +
Preference number: 4 (lower is better)
Translates to: SYKNKEELVQPLRSSLAPRTSCP*GMLWTR
Trigger: CCTCGTCCAGAGCATGCCTCATGGGCACGAGGTCCT...TGGAGCTAGACTCGATCTGAGTGGTTGGACTAACTCCTCTTTGTTTTTGTATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR GCA 90 bp GGAGCTCAGGGCCACGCTTTGTCATTTGCCTTCAAAGAAATTGCACTCTATCTGGGCTCAGGAGGTGGCTaGAGGAAGAACTCGAGCAAT +
Preference number: 4 (lower is better)
Translates to: GAQGHALSFAFKEIALYLGSGGG*RKNSSN
Trigger: ATTGCTCGAGTTCTTCCTGCAGCCACCTCCTGAGCC...CAGATAGAGTGCAATTTCTTTGAAGGCAAATGACAAAGCGTGGCCCTGAGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR GCA 90 bp AGGGCATCCTTGAGAGTCCAAATGAACTCAGTCAGGGAGCTCAGGGCCACGCTTCCTGAATTACTGCATTaGAGAACTCCAGGGAACTCA +
Preference number: 4 (lower is better)
Translates to: RASLRVQMNSVRELRATLPELLH*RTPGNS
Trigger: TGAGTTCCCTGGAGTTCTGCAATGCAGTAATTCAGG...AAGCGTGGCCCTGAGCTCCCTGACTGAGTTCATTTGGACTCTCAAGGATGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR GCA 90 bp CAAATGAACTCAGTCAGGGAGCTCAGGGCCACGCTTTGTCATTTGCCTTCAAAGTCCACAGAGGTCTTGTaGAAGGCAGGACCCATGACA +
Preference number: 4 (lower is better)
Translates to: QMNSVRELRATLCHLPSKSTEVL*KAGPMT
Trigger: TGTCATGGGTCCTGCCTTGCACAAGACCTCTGTGGA...CTTTGAAGGCAAATGACAAAGCGTGGCCCTGAGCTCCCTGACTGAGTTCATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR CCA 90 bp GCATCCTTGAGAGTCCAAATGAACTCAGTCAGGGAGCTCAGGGCCACGCTTTGTAAGCCCAGAGGTCACTaGCCAGTCCAGATTTCTAAA +
Preference number: 4 (lower is better)
Translates to: ASLRVQMNSVRELRATLCKPRGH*PVQISK
Trigger: TTTAGAAATCTGGACTGGCCAGTGACCTCTGGGCTT...ACAAAGCGTGGCCCTGAGCTCCCTGACTGAGTTCATTTGGACTCTCAAGGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR CCA 90 bp CAAATGAACTCAGTCAGGGAGCTCAGGGCCACGCTTTGTCATTTGCCTTCAAAGGAGGTTATACCAGGCTaGAATGGCAAGCCCAGAGGT +
Preference number: 4 (lower is better)
Translates to: QMNSVRELRATLCHLPSKEVIPG*NGKPRG
Trigger: ACCTCTGGGCTTGCCATTCCAGCCTGGTATAACCTC...CTTTGAAGGCAAATGACAAAGCGTGGCCCTGAGCTCCCTGACTGAGTTCATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR CCA 90 bp GCATCCTTGAGAGTCCAAATGAACTCAGTCAGGGAGCTCAGGGCCACGCTTTGTACACAAACACACAGCTaGCTGAGAAGTAGCACCAAG +
Preference number: 4 (lower is better)
Translates to: ASLRVQMNSVRELRATLCTQTHS*LRSSTK
Trigger: CTTGGTGCTACTTCTCAGCCAGCTGTGTGTTTGTGT...ACAAAGCGTGGCCCTGAGCTCCCTGACTGAGTTCATTTGGACTCTCAAGGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR CCA 90 bp CTCAGGGCCACGCTTTGTCATTTGCCTTCAAAGAAATTGCACTCTATCTGCTTATGTAGCGGCCCACAGTaGGGCTCCCAGCTGACAAAG +
Preference number: 4 (lower is better)
Translates to: LRATLCHLPSKKLHSICLCSGPQ*GSQLTK
Trigger: CTTTGTCAGCTGGGAGCCCCACTGTGGGCCGCTACA...TAAGCAGATAGAGTGCAATTTCTTTGAAGGCAAATGACAAAGCGTGGCCCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR CCA 90 bp AGGGAGCTCAGGGCCACGCTTTGTCATTTGCCTTCAAAGAAATTGCACTCTATCCCCAGCTCCCTCCTTTaGCACCAGACGAACCTTCTT +
Preference number: 4 (lower is better)
Translates to: RELRATLCHLPSKKLHSIPSSLL*HQTNLL
Trigger: AAGAAGGTTCGTCTGGTGCCAAAGGAGGGAGCTGGG...GATAGAGTGCAATTTCTTTGAAGGCAAATGACAAAGCGTGGCCCTGAGCTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR CCA 90 bp GCATCCTTGAGAGTCCAAATGAACTCAGTCAGGGAGCTCAGGGCCACGCTTTGTCCCAGACAGATAAACTaGACGGAATGGCATAGAGAG +
Preference number: 4 (lower is better)
Translates to: ASLRVQMNSVRELRATLCPRQIN*TEWHRE
Trigger: CTCTCTATGCCATTCCGTCCAGTTTATCTGTCTGGG...ACAAAGCGTGGCCCTGAGCTCCCTGACTGAGTTCATTTGGACTCTCAAGGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR GCA 90 bp AGGGAGCTCAGGGCCACGCTTTGTCATTTGCCTTCAAAGAAATTGCACTCTATCAACTGCACGGTCCTCTaGCAGCAGTGTCAACATCTG +
Preference number: 4 (lower is better)
Translates to: RELRATLCHLPSKKLHSINCTVL*QQCQHL
Trigger: CAGATGTTGACACTGCTGGCAGAGGACCGTGCAGTT...GATAGAGTGCAATTTCTTTGAAGGCAAATGACAAAGCGTGGCCCTGAGCTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR GCA 90 bp AACCCAAGACCCAGACAGATAAACTGGACGGAATGGCATAGAGAGTGTTTAGGTGTCAGCAGATCCTCGTaGAGAGCAAACTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: NPRPRQINWTEWHRECLGVSRSS*RANSSR
Trigger: CCTGCTGGAGTTTGCTCTGCACGAGGATCTGCTGAC...ACCTAAACACTCTCTATGCCATTCCGTCCAGTTTATCTGTCTGGGTCTTGGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR CCA 90 bp AGGGCCACGCTTTGTCATTTGCCTTCAAAGAAATTGCACTCTATCTGCTTAAGACGAGGGTGTCGAGGATaGTGTGGGTGTCATGCCGGT +
Preference number: 4 (lower is better)
Translates to: RATLCHLPSKKLHSICLRRGCRG*CGCHAG
Trigger: ACCGGCATGACACCCACACCATCCTCGACACCCTCG...TCTTAAGCAGATAGAGTGCAATTTCTTTGAAGGCAAATGACAAAGCGTGGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR CCA 90 bp AATGAACTCAGTCAGGGAGCTCAGGGCCACGCTTTGTCATTTGCCTTCAAAGAACGAACAGCCGGCTTCTaGCTCAGCATAACGTGGTTA +
Preference number: 4 (lower is better)
Translates to: NELSQGAQGHALSFAFKERTAGF*LSITWL
Trigger: TAACCACGTTATGCTGAGCCAGAAGCCGGCTGTTCG...TTCTTTGAAGGCAAATGACAAAGCGTGGCCCTGAGCTCCCTGACTGAGTTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR TCA 90 bp TGTTTAGGTGCCTCTCCATACAGGACAGCACATACGTCTTCAATATGGTTCAGAACTCCAGGGAACTCATaGAGAGTGCAAGGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: CLGASPYRTAHTSSIWFRTPGNS*RVQGLA
Trigger: TGCCAGCCCTTGCACTCTTCATGAGTTCCCTGGAGT...TCTGAACCATATTGAAGACGTATGTGCTGTCCTGTATGGAGAGGCACCTAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR TCA 90 bp TTGAGAGTCCAAATGAACTCAGTCAGGGAGCTCAGGGCCACGCTTTGTCATTTGGCAAGTACACAGAAATaGCATGGCCAAGAGGTCCAA +
Preference number: 4 (lower is better)
Translates to: LRVQMNSVRELRATLCHLASTQK*HGQEVQ
Trigger: TTGGACCTCTTGGCCATGTCATTTCTGTGTACTTGC...CAAATGACAAAGCGTGGCCCTGAGCTCCCTGACTGAGTTCATTTGGACTCTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR TCA 90 bp AGAGGAGTTAGTCCAACCACTCAGATCGAGTCTAGCTCCAGGGCATCCTTGAGAACAGGGACACAAGTATaGCATGACACGTATCTGGAA +
Preference number: 4 (lower is better)
Translates to: RGVSPTTQIESSSRASLRTGTQV*HDTYLE
Trigger: TTCCAGATACGTGTCATGTCATACTTGTGTCCCTGT...TCTCAAGGATGCCCTGGAGCTAGACTCGATCTGAGTGGTTGGACTAACTCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR GCA 90 bp AAAGCGAACAGGAAAAACTTGAAATCAAGTCCTTCTTTGAAGAGGTGGGGAGGATCACGAACTGGACCATaGCGCAACAGTGGCTGGCGA +
Preference number: 4 (lower is better)
Translates to: KANRKNLKSSPSLKRWGGSRTGP*RNSGWR
Trigger: TCGCCAGCCACTGTTGCGGCATGGTCCAGTTCGTGA...TCCTCCCCACCTCTTCAAAGAAGGACTTGATTTCAAGTTTTTCCTGTTCGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR GCA 90 bp GCCTCTCCATACAGGACAGCACATACGTCTTCAATATGGTTCAGAAATATTGCTGTCCACACCACGACGTaGCTCACGCAGATACTCCAG +
Preference number: 4 (lower is better)
Translates to: ASPYRTAHTSSIWFRNIAVHTTT*LTQILQ
Trigger: CTGGAGTATCTGCGTGAGGCACGTCGTGGTGTGGAC...AGCAATATTTCTGAACCATATTGAAGACGTATGTGCTGTCCTGTATGGAGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR CCA 90 bp AAAGCGAACAGGAAAAACTTGAAATCAAGTCCTTCTTTGAAGAGGTGGGGAGGACCAGACGAACCTTCTTaGCCCCCTCAGGCCATGATC +
Preference number: 4 (lower is better)
Translates to: KANRKNLKSSPSLKRWGGPDEPS*PPQAMI
Trigger: GATCATGGCCTGAGGGGGCCAAGAAGGTTCGTCTGG...TCCTCCCCACCTCTTCAAAGAAGGACTTGATTTCAAGTTTTTCCTGTTCGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR TCA 90 bp GCCTCTCCATACAGGACAGCACATACGTCTTCAATATGGTTCAGAAATATTGCTAGTGGGGCTCCCAGCTaGCAAAGCCATGAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: ASPYRTAHTSSIWFRNIASGAPS*QSHEKK
Trigger: CTTCTTCTCATGGCTTTGTCAGCTGGGAGCCCCACT...AGCAATATTTCTGAACCATATTGAAGACGTATGTGCTGTCCTGTATGGAGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR TCA 90 bp AATGAACTCAGTCAGGGAGCTCAGGGCCACGCTTTGTCATTTGCCTTCAAAGAAAATCAAGTCCTTCTTTaGAGAGGTGGGGAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: NELSQGAQGHALSFAFKENQVLL*RGGEEG
Trigger: TCCTTCCTCCCCACCTCTTCAAAGAAGGACTTGATT...TTCTTTGAAGGCAAATGACAAAGCGTGGCCCTGAGCTCCCTGACTGAGTTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR GCA 90 bp AACCCAAGACCCAGACAGATAAACTGGACGGAATGGCATAGAGAGTGTTTAGGTCCAAGCTCATCCCATTaGAGCTGCCATGTCAACACA +
Preference number: 4 (lower is better)
Translates to: NPRPRQINWTEWHRECLGPSSSH*SCHVNT
Trigger: TGTGTTGACATGGCAGCTGCAATGGGATGAGCTTGG...ACCTAAACACTCTCTATGCCATTCCGTCCAGTTTATCTGTCTGGGTCTTGGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR GCA 90 bp AACCCAAGACCCAGACAGATAAACTGGACGGAATGGCATAGAGAGTGTTTAGGTTCAAATAGTTTCAGTTaGTCAGCCCGCCGTTCCTCG +
Preference number: 4 (lower is better)
Translates to: NPRPRQINWTEWHRECLGSNSFS*SARRSS
Trigger: CGAGGAACGGCGGGCTGAGCAACTGAAACTATTTGA...ACCTAAACACTCTCTATGCCATTCCGTCCAGTTTATCTGTCTGGGTCTTGGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR GCA 90 bp TCATACAAAAACAAAGAGGAGTTAGTCCAACCACTCAGATCGAGTCTAGCTCCAAGAGCCGGGAGTTACTaGCAATACGAGCAACGAGGG +
Preference number: 4 (lower is better)
Translates to: SYKNKEELVQPLRSSLAPRAGSY*QYEQRG
Trigger: CCCTCGTTGCTCGTATTGGCAGTAACTCCCGGCTCT...TGGAGCTAGACTCGATCTGAGTGGTTGGACTAACTCCTCTTTGTTTTTGTATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR CCA 90 bp TCATACAAAAACAAAGAGGAGTTAGTCCAACCACTCAGATCGAGTCTAGCTCCACCAGATAGGCGGTACTaGCGATCATCTCCTCCACAG +
Preference number: 4 (lower is better)
Translates to: SYKNKEELVQPLRSSLAPPDRRY*RSSPPQ
Trigger: CTGTGGAGGAGATGATCGCCAGTACCGCCTATCTGG...TGGAGCTAGACTCGATCTGAGTGGTTGGACTAACTCCTCTTTGTTTTTGTATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR CCA 90 bp CAGATCGAGTCTAGCTCCAGGGCATCCTTGAGAGTCCAAATGAACTCAGTCAGGTACACAGAAATGACATaGCCAAGAGGTCCAAGAAAC +
Preference number: 4 (lower is better)
Translates to: QIESSSRASLRVQMNSVRYTEMT*PRGPRN
Trigger: GTTTCTTGGACCTCTTGGCCATGTCATTTCTGTGTA...CCTGACTGAGTTCATTTGGACTCTCAAGGATGCCCTGGAGCTAGACTCGATCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR CCA 90 bp AGTCAGGGAGCTCAGGGCCACGCTTTGTCATTTGCCTTCAAAGAAATTGCACTCAAACCAGCACAAGCATaGAAGACGTACAGACAGACA +
Preference number: 4 (lower is better)
Translates to: SQGAQGHALSFAFKEIALKPAQA*KTYRQT
Trigger: TGTCTGTCTGTACGTCTTCCATGCTTGTGCTGGTTT...GAGTGCAATTTCTTTGAAGGCAAATGACAAAGCGTGGCCCTGAGCTCCCTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR TCA 90 bp AGGGCCACGCTTTGTCATTTGCCTTCAAAGAAATTGCACTCTATCTGCTTAAGAACCACCTGGGACCAGTaGTTCTTGAAGACCATGAGG +
Preference number: 4 (lower is better)
Translates to: RATLCHLPSKKLHSICLRTTWDQ*FLKTMR
Trigger: CCTCATGGTCTTCAAGAATCACTGGTCCCAGGTGGT...TCTTAAGCAGATAGAGTGCAATTTCTTTGAAGGCAAATGACAAAGCGTGGCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR GCA 90 bp AGGGCCACGCTTTGTCATTTGCCTTCAAAGAAATTGCACTCTATCTGCTTAAGATACCTGAGAACCAGCTaGAGCAGGACATCCTCACAG +
Preference number: 4 (lower is better)
Translates to: RATLCHLPSKKLHSICLRYLRTS*SRTSSQ
Trigger: CTGTGAGGATGTCCTGCTGCAGCTGGTTCTCAGGTA...TCTTAAGCAGATAGAGTGCAATTTCTTTGAAGGCAAATGACAAAGCGTGGCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR TCA 90 bp TCATACAAAAACAAAGAGGAGTTAGTCCAACCACTCAGATCGAGTCTAGCTCCAAAACACACAGCTGGCTaGGAAGTAGCACCAAGCCTT +
Preference number: 4 (lower is better)
Translates to: SYKNKEELVQPLRSSLAPKHTAG*EVAPSL
Trigger: AAGGCTTGGTGCTACTTCTCAGCCAGCTGTGTGTTT...TGGAGCTAGACTCGATCTGAGTGGTTGGACTAACTCCTCTTTGTTTTTGTATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR TCA 90 bp GGAGCTCAGGGCCACGCTTTGTCATTTGCCTTCAAAGAAATTGCACTCTATCTGGACACAAGTATGACATaGCACGTATCTGGAAGTGAT +
Preference number: 4 (lower is better)
Translates to: GAQGHALSFAFKEIALYLDTSMT*HVSGSD
Trigger: ATCACTTCCAGATACGTGTCATGTCATACTTGTGTC...CAGATAGAGTGCAATTTCTTTGAAGGCAAATGACAAAGCGTGGCCCTGAGCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR GCA 90 bp TCATACAAAAACAAAGAGGAGTTAGTCCAACCACTCAGATCGAGTCTAGCTCCAATGGTGTGGGTGTCATaGCGGTGCAACAACAGGAAT +
Preference number: 4 (lower is better)
Translates to: SYKNKEELVQPLRSSLAPMVWVS*RCNNRN
Trigger: ATTCCTGTTGTTGCACCGGCATGACACCCACACCAT...TGGAGCTAGACTCGATCTGAGTGGTTGGACTAACTCCTCTTTGTTTTTGTATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR CCA 90 bp AGGGCCACGCTTTGTCATTTGCCTTCAAAGAAATTGCACTCTATCTGCTTAAGAGTGCCAATCATCCCCTaGAACCTCAATCTTTCGAGG +
Preference number: 4 (lower is better)
Translates to: RATLCHLPSKKLHSICLRVPIIP*NLNLSR
Trigger: CCTCGAAAGATTGAGGTTCCAGGGGATGATTGGCAC...TCTTAAGCAGATAGAGTGCAATTTCTTTGAAGGCAAATGACAAAGCGTGGCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR CCA 90 bp ACCACTCAGATCGAGTCTAGCTCCAGGGCATCCTTGAGAGTCCAAATGAACTCACATAACGTGGTTACATaGAACAAGATACCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: TTQIESSSRASLRVQMNSHNVVT*NKIPEN
Trigger: GTTCTCAGGTATCTTGTTCCATGTAACCACGTTATG...TGAGTTCATTTGGACTCTCAAGGATGCCCTGGAGCTAGACTCGATCTGAGTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
3UTR CAA 72 bp AACTCAGTCAGGGAGCTCAGGGCCACGCTTTGTCATTaGCCTTCAAAGAAATTGCACTCTATCTGCTTAAGA +
Preference number: 4 (lower is better)
Translates to: NSVRELRATLCH*PSKKLHSICLR
Trigger: TCTTAAGCAGATAGAGTGCAATTTCTTTGAAGGCAAATGACAAAGCGTGGCCCTGAGCTCCCTGACTGAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR CCA 90 bp AATGAACTCAGTCAGGGAGCTCAGGGCCACGCTTTGTCATTTGCCTTCAAAGAAATAAACTGGACGGAATaGCATAGAGAGTGTTTAGGT +
Preference number: 4 (lower is better)
Translates to: NELSQGAQGHALSFAFKEINWTE*HRECLG
Trigger: ACCTAAACACTCTCTATGCCATTCCGTCCAGTTTAT...TTCTTTGAAGGCAAATGACAAAGCGTGGCCCTGAGCTCCCTGACTGAGTTCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR CCA 90 bp AAAGCGAACAGGAAAAACTTGAAATCAAGTCCTTCTTTGAAGAGGTGGGGAGGATGGCTCAGCATAACGTaGTTACATGGAACAAGATAC +
Preference number: 4 (lower is better)
Translates to: KANRKNLKSSPSLKRWGGWLSIT*LHGTRY
Trigger: GTATCTTGTTCCATGTAACCACGTTATGCTGAGCCA...TCCTCCCCACCTCTTCAAAGAAGGACTTGATTTCAAGTTTTTCCTGTTCGCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR CCA 90 bp AGGGCCACGCTTTGTCATTTGCCTTCAAAGAAATTGCACTCTATCTGCTTAAGAAATGGCGGGGTAAGCTaGCTCTCATACAAAAACAAA +
Preference number: 4 (lower is better)
Translates to: RATLCHLPSKKLHSICLRNGGVS*LSYKNK
Trigger: TTTGTTTTTGTATGAGAGCCAGCTTACCCCGCCATT...TCTTAAGCAGATAGAGTGCAATTTCTTTGAAGGCAAATGACAAAGCGTGGCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR GCA 90 bp TCATACAAAAACAAAGAGGAGTTAGTCCAACCACTCAGATCGAGTCTAGCTCCACCACGCTTTGTCATTTaGCTTCAAAGAAATTGCACT +
Preference number: 4 (lower is better)
Translates to: SYKNKEELVQPLRSSLAPPRFVI*LQRNCT
Trigger: AGTGCAATTTCTTTGAAGGCAAATGACAAAGCGTGG...TGGAGCTAGACTCGATCTGAGTGGTTGGACTAACTCCTCTTTGTTTTTGTATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR CCA 90 bp TGTTTAGGTGCCTCTCCATACAGGACAGCACATACGTCTTCAATATGGTTCAGACATACGTCTTCAATATaGTTCAGAAATATTGCTGTG +
Preference number: 4 (lower is better)
Translates to: CLGASPYRTAHTSSIWFRHTSSI*FRNIAV
Trigger: CACAGCAATATTTCTGAACCATATTGAAGACGTATG...TCTGAACCATATTGAAGACGTATGTGCTGTCCTGTATGGAGAGGCACCTAAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS TCA 90 bp GGAACGCCGAACCTGGCCGGGCCCGGTTGCTGCTGCGGTGTTAGGTaGGTTCAGGCCGCCGCCATCGCTTCTCAAGCGCACCAGCCGCGC +
Preference number: 5 (lower is better)
Translates to: GTPNLAGPGCCCGVR*VQAAAIASQAHQPR
Trigger: GCGCGGCTGGTGCGCTTGAGAAGCGATGGCGGCGGCCTGAACTCACCTAACACCGCAGCAGCAACCGGGCCCGGCCAGGTTCGGCGTTCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000524416.1
CDS GCA 90 bp AGTGTGGTTGCGCACAGCACTGAGATCGTCTGCACCCCCAGGAGCTaGCCGAGGGCCTTGCCGCTCCAGGATTCGCACCACCTGGGACCA +
Preference number: 5 (lower is better)
Translates to: SVVAHSTEIVCTPRS*PRALPLQDSHHLGP
Trigger: TGGTCCCAGGTGGTGCGAATCCTGGAGCGGCAAGGCCCTCGGGCAGCTCCTGGGGGTGCAGACGATCTCAGTGCTGTGCGCAACCACACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000524416.1
CDS GCA 90 bp CAGGGGCCCAGGGCCTGTGGGGGCCGAGGGAACTGCACGGTCCTCTaGCAGCAGTGTCAACATCTGGTAAGTGTGGTTGCGCACAGCACT +
Preference number: 5 (lower is better)
Translates to: QGPRACGGRGNCTVL*QQCQHLVSVVAHST
Trigger: AGTGCTGTGCGCAACCACACTTACCAGATGTTGACACTGCTGGCAGAGGACCGTGCAGTTCCCTCGGCCCCCACAGGCCCTGGGCCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000524416.1
CDS GCA 90 bp TCCCATTGCAGCTGCCATGTCAACACACGGGTCAGCAGATCCTCGTaGAGAGCAAACTCCAGCAGGGGCCCAGGGCCTGTGGGGGCCGAG +
Preference number: 5 (lower is better)
Translates to: SHCSCHVNTRVSRSS*RANSSRGPGPVGAE
Trigger: CTCGGCCCCCACAGGCCCTGGGCCCCTGCTGGAGTTTGCTCTGCACGAGGATCTGCTGACCCGTGTGTTGACATGGCAGCTGCAATGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000524416.1
CDS-3UTR CAA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCAGCTGCCCGAGGGCCTaGCCGCTCCAGGATTCGCAC +
Preference number: 5 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGSCPRA*PLQDSH
Trigger: GTGCGAATCCTGGAGCGGCAAGGCCCTCGGGCAGCT...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR CAA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCTCGAAGAGCCTCACCTaGGCGTTCAGGGGCCCCGCC +
Preference number: 5 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGSKSLT*AFRGPA
Trigger: GGCGGGGCCCCTGAACGCCAAGGTGAGGCTCTTCGA...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS CCA 90 bp AGAGCCACCCAGGCTCTGCTGCCGCAGGAAGAGAGCCAGACGAGATaGTGTGGAGGGCCGGGGTACTGTCGTCACAGAAGAGGAGTCCAC +
Preference number: 5 (lower is better)
Translates to: RATQALLPQEESQTR*CGGPGYCRHRRGVH
Trigger: GTGGACTCCTCTTCTGTGACGACAGTACCCCGGCCCTCCACACCATCTCGTCTGGCTCTCTTCCTGCGGCAGCAGAGCCTGGGTGGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000524416.1
ENST00000532797.1
CDS-3UTR CAA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCAGGCTGAAGGACCAATaGTGCCGCCTGCCGGGCCCT +
Preference number: 5 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGRLKDQ*CRLPGP
Trigger: AGGGCCCGGCAGGCGGCACAATTGGTCCTTCAGCCT...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS TCA 90 bp CTGCCAGCAGTGTCAACATCTGGTAAGTGTGGTTGCGCACAGCACTaGGATCGTCTGCACCCCCAGGAGCTGCCCGAGGGCCTTGCCGCT +
Preference number: 5 (lower is better)
Translates to: LPAVSTSGKCGCAQH*DRLHPQELPEGLAA
Trigger: AGCGGCAAGGCCCTCGGGCAGCTCCTGGGGGTGCAGACGATCTCAGTGCTGTGCGCAACCACACTTACCAGATGTTGACACTGCTGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000524416.1
CDS GCA 90 bp AGCAAACTCCAGCAGGGGCCCAGGGCCTGTGGGGGCCGAGGGAACTaGACGGTCCTCTGCCAGCAGTGTCAACATCTGGTAAGTGTGGTT +
Preference number: 5 (lower is better)
Translates to: SKLQQGPRACGGRGN*TVLCQQCQHLVSVV
Trigger: AACCACACTTACCAGATGTTGACACTGCTGGCAGAGGACCGTGCAGTTCCCTCGGCCCCCACAGGCCCTGGGCCCCTGCTGGAGTTTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000524416.1
CDS CCA 90 bp CACCCAGGCTCTGCTGCCGCAGGAAGAGAGCCAGACGAGATGGTGTaGAGGGCCGGGGTACTGTCGTCACAGAAGAGGAGTCCACACTTG +
Preference number: 5 (lower is better)
Translates to: HPGSAAAGREPDEMV*RAGVLSSQKRSPHL
Trigger: CAAGTGTGGACTCCTCTTCTGTGACGACAGTACCCCGGCCCTCCACACCATCTCGTCTGGCTCTCTTCCTGCGGCAGCAGAGCCTGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000524416.1
ENST00000532797.1
CDS CCA 90 bp TTCCAGGACCTCGTGCCCATGAGGCATGCTCTGGACGAGGTGGGCTaGGGGCGTGGTGCCGACAACAGCGTGGGATTAGGGAGAGAAACT +
Preference number: 5 (lower is better)
Translates to: FQDLVPMRHALDEVG*GRGADNSVGLGRET
Trigger: AGTTTCTCTCCCTAATCCCACGCTGTTGTCGGCACCACGCCCCCAGCCCACCTCGTCCAGAGCATGCCTCATGGGCACGAGGTCCTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449352.7
ENST00000524416.1
ENST00000532797.1
CDS CCA 90 bp AGGCCTAGGCTAAGTAGCTTACCAGTGAAGGGCTGGCTTGGCAGCTaGTTGAGAGTCCGCAAAGGGCTGCTGAGGAAGGGGCCAGGGGGC +
Preference number: 5 (lower is better)
Translates to: RPRLSSLPVKGWLGS*LRVRKGLLRKGPGG
Trigger: GCCCCCTGGCCCCTTCCTCAGCAGCCCTTTGCGGACTCTCAACCAGCTGCCAAGCCAGCCCTTCACTGGTAAGCTACTTAGCCTAGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR CAA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCTCCCCTTCCCCCACGTaGTTCCTGTCCTCCTCAGGC +
Preference number: 5 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGSPSPT*FLSSSG
Trigger: GCCTGAGGAGGACAGGAACAACGTGGGGGAAGGGGA...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS GCA 90 bp TGTCAACATCTGGTAAGTGTGGTTGCGCACAGCACTGAGATCGTCTaGACCCCCAGGAGCTGCCCGAGGGCCTTGCCGCTCCAGGATTCG +
Preference number: 5 (lower is better)
Translates to: CQHLVSVVAHSTEIV*TPRSCPRALPLQDS
Trigger: CGAATCCTGGAGCGGCAAGGCCCTCGGGCAGCTCCTGGGGGTGCAGACGATCTCAGTGCTGTGCGCAACCACACTTACCAGATGTTGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000524416.1
CDS GCA 90 bp GCCCGCCGTTCCTCGACCCCATCCCCAAGCTCATCCCATTGCAGCTaGCATGTCAACACACGGGTCAGCAGATCCTCGTGCAGAGCAAAC +
Preference number: 5 (lower is better)
Translates to: ARRSSTPSPSSSHCS*HVNTRVSRSSCRAN
Trigger: GTTTGCTCTGCACGAGGATCTGCTGACCCGTGTGTTGACATGGCAGCTGCAATGGGATGAGCTTGGGGATGGGGTCGAGGAACGGCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000524416.1
CDS CCA 90 bp GGCCAGTCCAGATTTCTAAATCGTTCACTCACGGAACGCCGAACCTaGCCGGGCCCGGTTGCTGCTGCGGTGTTAGGTGAGTTCAGGCCG +
Preference number: 5 (lower is better)
Translates to: GQSRFLNRSLTERRT*PGPVAAAVLGEFRP
Trigger: CGGCCTGAACTCACCTAACACCGCAGCAGCAACCGGGCCCGGCCAGGTTCGGCGTTCCGTGAGTGAACGATTTAGAAATCTGGACTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000524416.1
CDS-3UTR CAA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCCCCCAGCTCCCTCCTTaGGCACCAGACGAACCTTCT +
Preference number: 5 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGPQLPP*APDEPS
Trigger: AGAAGGTTCGTCTGGTGCCAAAGGAGGGAGCTGGGG...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR CAA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCTGGCTTGGCAGCTGGTaGAGAGTCCGCAAAGGGCTG +
Preference number: 5 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGWLGSW*RVRKGL
Trigger: CAGCCCTTTGCGGACTCTCAACCAGCTGCCAAGCCA...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS GCA 90 bp AGACCAGGTACGGCAGGCTCGGACACAGCGGTCCACACCACGACGTaGCTCACGCAGATACTCCAGGTAATTGTCTTCCAGCTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: RPGTAGSDTAVHTTT*LTQILQVIVFQLSR
Trigger: CCTGGAGAGCTGGAAGACAATTACCTGGAGTATCTGCGTGAGGCACGTCGTGGTGTGGACCGCTGTGTCCGAGCCTGCCGTACCTGGTCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000524416.1
ENST00000532797.1
CDS-3UTR CAA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCTTGGAGATTGGCCCCTaGAGGTATACGGTGCCCAGG +
Preference number: 5 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGLEIGP*RYTVPR
Trigger: CCTGGGCACCGTATACCTCAAGGGGCCAATCTCCAA...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR CAA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCAGCCATGACTGGGGTTaGGAGATTGGCCCCTTGAGG +
Preference number: 5 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGSHDWG*EIGPLR
Trigger: CCTCAAGGGGCCAATCTCCAAACCCCAGTCATGGCT...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR CAA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCTCCTCCACAGAGGTCTaGTGCAAGGCAGGACCCATG +
Preference number: 5 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGSSTEV*CKAGPM
Trigger: CATGGGTCCTGCCTTGCACAAGACCTCTGTGGAGGA...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR CAA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCACCAGACGAACCTTCTaGGCCCCCTCAGGCCATGAT +
Preference number: 5 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGTRRTF*APSGHD
Trigger: ATCATGGCCTGAGGGGGCCAAGAAGGTTCGTCTGGT...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR CAA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCTCAGCCCAGTCCAACTaGCCACGGGCAATGAGGTAC +
Preference number: 5 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGSAQSN*PRAMRY
Trigger: GTACCTCATTGCCCGTGGCAAGTTGGACTGGGCTGA...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR CAA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCAAGAGGAGTCCACACTaGGGCTTCCAGGACCTCGTG +
Preference number: 5 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGKRSPH*GFQDLV
Trigger: CACGAGGTCCTGGAAGCCCAAGTGTGGACTCCTCTT...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449352.7
CDS-3UTR CAA 90 bp CAGATCGAGTCTAGCTCCAGGGCATCCTTGAGAGTCCAAATGAACTCAGTCAGGAGCTGCCCGAGGGCCTaGCCGCTCCAGGATTCGCAC +
Preference number: 5 (lower is better)
Translates to: QIESSSRASLRVQMNSVRSCPRA*PLQDSH
Trigger: GTGCGAATCCTGGAGCGGCAAGGCCCTCGGGCAGCT...CCTGACTGAGTTCATTTGGACTCTCAAGGATGCCCTGGAGCTAGACTCGATCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS GCA 90 bp CCACAGGCATCCAGCAGGGTGAGCAGAGCCTCACGAACTGGACCATaGCGCAACAGTGGCTGGCGAGCTTCGCTCACTAGCATTTCAAAT +
Preference number: 5 (lower is better)
Translates to: PQASSRVSRASRTGP*RNSGWRASLTSISN
Trigger: ATTTGAAATGCTAGTGAGCGAAGCTCGCCAGCCACTGTTGCGGCATGGTCCAGTTCGTGAGGCTCTGCTCACCCTGCTGGATGCCTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000524416.1
CDS GCA 90 bp GAAAAGAGAAGAAGACGGGGAGCGGCTCCAGGCTCAGGAGGTGGCTaGAGGAAGAACTCGAGCAATGAAGGCTCCTGGGCCACACAAACA +
Preference number: 5 (lower is better)
Translates to: EKRRRRGAAPGSGGG*RKNSSNEGSWATQT
Trigger: TGTTTGTGTGGCCCAGGAGCCTTCATTGCTCGAGTTCTTCCTGCAGCCACCTCCTGAGCCTGGAGCCGCTCCCCGTCTTCTTCTCTTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000524416.1
CDS GCA 90 bp AGTGCAAGGGCTGGCACTCCCAGCCAGTCTTCCCGTCGCAGACAGTaGCAATCATCCCCTGGAACCTCAATCTTTCGAGGCAGTGATGAG +
Preference number: 5 (lower is better)
Translates to: SARAGTPSQSSRRRQ*QSSPGTSIFRGSDE
Trigger: CTCATCACTGCCTCGAAAGATTGAGGTTCCAGGGGATGATTGGCACTGTCTGCGACGGGAAGACTGGCTGGGAGTGCCAGCCCTTGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000524416.1
CDS CCA 90 bp GTGATTCTTGAAGACCATGAGGCAGGTCTCGGGATCAGCCATGACTaGGGTTTGGAGATTGGCCCCTTGAGGTATACGGTGCCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: VILEDHEAGLGISHD*GLEIGPLRYTVPRA
Trigger: GGCCCTGGGCACCGTATACCTCAAGGGGCCAATCTCCAAACCCCAGTCATGGCTGATCCCGAGACCTGCCTCATGGTCTTCAAGAATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000524416.1
CDS CCA 90 bp CGGGAGTTACTGCCAATACGAGCAACGAGGGTGTCGAGGATGGTGTaGGTGTCATGCCGGTGCAACAACAGGAATCGCAGGAAGGTACGG +
Preference number: 5 (lower is better)
Translates to: RELLPIRATRVSRMV*VSCRCNNRNRRKVR
Trigger: CCGTACCTTCCTGCGATTCCTGTTGTTGCACCGGCATGACACCCACACCATCCTCGACACCCTCGTTGCTCGTATTGGCAGTAACTCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000524416.1
CDS CCA 90 bp AGAGCCGGGAGTTACTGCCAATACGAGCAACGAGGGTGTCGAGGATaGTGTGGGTGTCATGCCGGTGCAACAACAGGAATCGCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: RAGSYCQYEQRGCRG*CGCHAGATTGIAGR
Trigger: CCTTCCTGCGATTCCTGTTGTTGCACCGGCATGACACCCACACCATCCTCGACACCCTCGTTGCTCGTATTGGCAGTAACTCCCGGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000524416.1
CDS TCA 90 bp ACTCGAGCAATGAAGGCTCCTGGGCCACACAAACACACAGCTGGCTaGGAAGTAGCACCAAGCCTTCATCCAGTGCTGGGCTACTGGGCA +
Preference number: 5 (lower is better)
Translates to: TRAMKAPGPHKHTAG*EVAPSLHPVLGYWA
Trigger: TGCCCAGTAGCCCAGCACTGGATGAAGGCTTGGTGCTACTTCTCAGCCAGCTGTGTGTTTGTGTGGCCCAGGAGCCTTCATTGCTCGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000524416.1
CDS GCA 90 bp CTTGTGTCTCCAGTCTGCTTCATCCGGTCTGTAGGAGCCAGTAGCTaGCCATGGAGCCAGAGGTTATACCAGGCTGGAATGGCAAGCCCA +
Preference number: 5 (lower is better)
Translates to: LVSPVCFIRSVGASS*PWSQRLYQAGMASP
Trigger: TGGGCTTGCCATTCCAGCCTGGTATAACCTCTGGCTCCATGGGCAGCTACTGGCTCCTACAGACCGGATGAAGCAGACTGGAGACACAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000524416.1
CDS GCA 90 bp ATACGAGCAACGAGGGTGTCGAGGATGGTGTGGGTGTCATGCCGGTaGAACAACAGGAATCGCAGGAAGGTACGGAGCAAAGCAGGCTCT +
Preference number: 5 (lower is better)
Translates to: IRATRVSRMVWVSCR*NNRNRRKVRSKAGS
Trigger: AGAGCCTGCTTTGCTCCGTACCTTCCTGCGATTCCTGTTGTTGCACCGGCATGACACCCACACCATCCTCGACACCCTCGTTGCTCGTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000524416.1
CDS GCA 90 bp CTGCCAATACGAGCAACGAGGGTGTCGAGGATGGTGTGGGTGTCATaGCGGTGCAACAACAGGAATCGCAGGAAGGTACGGAGCAAAGCA +
Preference number: 5 (lower is better)
Translates to: LPIRATRVSRMVWVS*RCNNRNRRKVRSKA
Trigger: TGCTTTGCTCCGTACCTTCCTGCGATTCCTGTTGTTGCACCGGCATGACACCCACACCATCCTCGACACCCTCGTTGCTCGTATTGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000524416.1
CDS-3UTR CAA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCCTACACTCTGAGGATTaGCCAGCTGGAGGTTTTCTC +
Preference number: 5 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGLHSED*PAGGFL
Trigger: GAGAAAACCTCCAGCTGGCAAATCCTCAGAGTGTAG...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR CAA 90 bp AGGGCATCCTTGAGAGTCCAAATGAACTCAGTCAGGGAGCTCAGGGCCACGCTTACCAGACGAACCTTCTaGGCCCCCTCAGGCCATGAT +
Preference number: 5 (lower is better)
Translates to: RASLRVQMNSVRELRATLTRRTF*APSGHD
Trigger: ATCATGGCCTGAGGGGGCCAAGAAGGTTCGTCTGGT...AAGCGTGGCCCTGAGCTCCCTGACTGAGTTCATTTGGACTCTCAAGGATGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR CAA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCAGCATGTTCTCGAGTTaGGCAAAGAGCACAGCCATG +
Preference number: 5 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGSMFSS*AKSTAM
Trigger: CATGGCTGTGCTCTTTGCCAAACTCGAGAACATGCT...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR CAA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCGCAATGAGGTACTTCTaGGCTTTGGACAGCAGTGCT +
Preference number: 5 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGAMRYF*ALDSSA
Trigger: AGCACTGCTGTCCAAAGCCAAGAAGTACCTCATTGC...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS GCA 90 bp AGTGGCTGGCGAGCTTCGCTCACTAGCATTTCAAATAGTTTCAGTTaGTCAGCCCGCCGTTCCTCGACCCCATCCCCAAGCTCATCCCAT +
Preference number: 5 (lower is better)
Translates to: SGWRASLTSISNSFS*SARRSSTPSPSSSH
Trigger: ATGGGATGAGCTTGGGGATGGGGTCGAGGAACGGCGGGCTGAGCAACTGAAACTATTTGAAATGCTAGTGAGCGAAGCTCGCCAGCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000524416.1
CDS CCA 90 bp GAGCCAGAGGTTATACCAGGCTGGAATGGCAAGCCCAGAGGTCACTaGCCAGTCCAGATTTCTAAATCGTTCACTCACGGAACGCCGAAC +
Preference number: 5 (lower is better)
Translates to: EPEVIPGWNGKPRGH*PVQISKSFTHGTPN
Trigger: GTTCGGCGTTCCGTGAGTGAACGATTTAGAAATCTGGACTGGCCAGTGACCTCTGGGCTTGCCATTCCAGCCTGGTATAACCTCTGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000524416.1
CDS CCA 90 bp AAGAACTCGAGCAATGAAGGCTCCTGGGCCACACAAACACACAGCTaGCTGAGAAGTAGCACCAAGCCTTCATCCAGTGCTGGGCTACTG +
Preference number: 5 (lower is better)
Translates to: KNSSNEGSWATQTHS*LRSSTKPSSSAGLL
Trigger: CAGTAGCCCAGCACTGGATGAAGGCTTGGTGCTACTTCTCAGCCAGCTGTGTGTTTGTGTGGCCCAGGAGCCTTCATTGCTCGAGTTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000524416.1
CDS CCA 90 bp CAGGCTCTGAGATACTCCGTAGGAAAAGTTCCAGATAGGCGGTACTaGCGATCATCTCCTCCACAGAGGTCTTGTGCAAGGCAGGACCCA +
Preference number: 5 (lower is better)
Translates to: QALRYSVGKVPDRRY*RSSPPQRSCARQDP
Trigger: TGGGTCCTGCCTTGCACAAGACCTCTGTGGAGGAGATGATCGCCAGTACCGCCTATCTGGAACTTTTCCTACGGAGTATCTCAGAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000524416.1
CDS-3UTR CAA 90 bp ATCCTTGAGAGTCCAAATGAACTCAGTCAGGGAGCTCAGGGCCACGCTTTGTCATTGGAGATTGGCCCCTaGAGGTATACGGTGCCCAGG +
Preference number: 5 (lower is better)
Translates to: ILESPNELSQGAQGHALSLEIGP*RYTVPR
Trigger: CCTGGGCACCGTATACCTCAAGGGGCCAATCTCCAA...TGACAAAGCGTGGCCCTGAGCTCCCTGACTGAGTTCATTTGGACTCTCAAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR CAA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCATTAGGGAGAGAAACTaGTCAGCTGCTCGTCCATAT +
Preference number: 5 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGIRERN*SAARPY
Trigger: ATATGGACGAGCAGCTGACAAGTTTCTCTCCCTAAT...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS-3UTR CAA 90 bp TTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTGCCCTAGCCCCAGCCCGGGCATGGCAGCCAACTCCTaGAGAAATTCAGGGAAAATG +
Preference number: 5 (lower is better)
Translates to: LPLPPNIKRSLCPSPSPGMAANS*RNSGKM
Trigger: CATTTTCCCTGAATTTCTCAAGGAGTTGGCTGCCAT...GCCCGGGCTGGGGCTAGGGCACAGGCTCCTTTTTATGTTTGGAGGCAGTGGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265978.8
ENST00000449352.7
CDS CCA 90 bp AGGGTGAGCAGAGCCTCACGAACTGGACCATGCCGCAACAGTGGCTaGCGAGCTTCGCTCACTAGCATTTCAAATAGTTTCAGTTGCTCA +
Preference number: 5 (lower is better)
Translates to: RVSRASRTGPCRNSG*RASLTSISNSFSCS
Trigger: TGAGCAACTGAAACTATTTGAAATGCTAGTGAGCGAAGCTCGCCAGCCACTGTTGCGGCATGGTCCAGTTCGTGAGGCTCTGCTCACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000524416.1
CDS-3UTR CAA 90 bp GGAGCTCAGGGCCACGCTTTGTCATTTGCCTTCAAAGAAATTGCACTCTATCTGCCCCAGCTCCCTCCTTaGGCACCAGACGAACCTTCT +
Preference number: 5 (lower is better)
Translates to: GAQGHALSFAFKEIALYLPQLPP*APDEPS
Trigger: AGAAGGTTCGTCTGGTGCCAAAGGAGGGAGCTGGGG...CAGATAGAGTGCAATTTCTTTGAAGGCAAATGACAAAGCGTGGCCCTGAGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR CAA 90 bp GGAGCTCAGGGCCACGCTTTGTCATTTGCCTTCAAAGAAATTGCACTCTATCTGTCCTCCACAGAGGTCTaGTGCAAGGCAGGACCCATG +
Preference number: 5 (lower is better)
Translates to: GAQGHALSFAFKEIALYLSSTEV*CKAGPM
Trigger: CATGGGTCCTGCCTTGCACAAGACCTCTGTGGAGGA...CAGATAGAGTGCAATTTCTTTGAAGGCAAATGACAAAGCGTGGCCCTGAGCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS CCA 90 bp TCAGCTGCTCGTCCATATAGGTCCACATCACGAACAGCCGGCTTCTaGCTCAGCATAACGTGGTTACATGGAACAAGATACCTGAGAACC +
Preference number: 5 (lower is better)
Translates to: SAARPYRSTSRTAGF*LSITWLHGTRYLRT
Trigger: GGTTCTCAGGTATCTTGTTCCATGTAACCACGTTATGCTGAGCCAGAAGCCGGCTGTTCGTGATGTGGACCTATATGGACGAGCAGCTGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000524416.1
CDS CCA 90 bp CTTGCCACGGGCAATGAGGTACTTCTTGGCTTTGGACAGCAGTGCTaGGAAGTCCTCCTGGGAAGCCGCAAAGTTCTCAATCTTATTCTT +
Preference number: 5 (lower is better)
Translates to: LATGNEVLLGFGQQC*EVLLGSRKVLNLIL
Trigger: AAGAATAAGATTGAGAACTTTGCGGCTTCCCAGGAGGACTTCCCAGCACTGCTGTCCAAAGCCAAGAAGTACCTCATTGCCCGTGGCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000529360.1
CDS-3UTR CAA 90 bp CAGATCGAGTCTAGCTCCAGGGCATCCTTGAGAGTCCAAATGAACTCAGTCAGGCTACACTCTGAGGATTaGCCAGCTGGAGGTTTTCTC +
Preference number: 5 (lower is better)
Translates to: QIESSSRASLRVQMNSVRLHSED*PAGGFL
Trigger: GAGAAAACCTCCAGCTGGCAAATCCTCAGAGTGTAG...CCTGACTGAGTTCATTTGGACTCTCAAGGATGCCCTGGAGCTAGACTCGATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR CAA 90 bp TCATACAAAAACAAAGAGGAGTTAGTCCAACCACTCAGATCGAGTCTAGCTCCATCCCCTTCCCCCACGTaGTTCCTGTCCTCCTCAGGC +
Preference number: 5 (lower is better)
Translates to: SYKNKEELVQPLRSSLAPSPSPT*FLSSSG
Trigger: GCCTGAGGAGGACAGGAACAACGTGGGGGAAGGGGA...TGGAGCTAGACTCGATCTGAGTGGTTGGACTAACTCCTCTTTGTTTTTGTATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR CAA 90 bp CTCAGGGCCACGCTTTGTCATTTGCCTTCAAAGAAATTGCACTCTATCTGCTTATGGCTTGGCAGCTGGTaGAGAGTCCGCAAAGGGCTG +
Preference number: 5 (lower is better)
Translates to: LRATLCHLPSKKLHSICLWLGSW*RVRKGL
Trigger: CAGCCCTTTGCGGACTCTCAACCAGCTGCCAAGCCA...TAAGCAGATAGAGTGCAATTTCTTTGAAGGCAAATGACAAAGCGTGGCCCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR CAA 90 bp TGTTTAGGTGCCTCTCCATACAGGACAGCACATACGTCTTCAATATGGTTCAGAAAGAGGAGTCCACACTaGGGCTTCCAGGACCTCGTG +
Preference number: 5 (lower is better)
Translates to: CLGASPYRTAHTSSIWFRKRSPH*GFQDLV
Trigger: CACGAGGTCCTGGAAGCCCAAGTGTGGACTCCTCTT...TCTGAACCATATTGAAGACGTATGTGCTGTCCTGTATGGAGAGGCACCTAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS CCA 90 bp CCCGTGGCCACCTATTCTGGAGGAAATAAGATGGCAGACACCATATaGACCCACAAGATTCCAGATGCCAGCTTTACACACATTCAAGCT +
Preference number: 5 (lower is better)
Translates to: PVATYSGGNKMADTI*THKIPDASFTHIQA
Trigger: AGCTTGAATGTGTGTAAAGCTGGCATCTGGAATCTTGTGGGTCCATATGGTGTCTGCCATCTTATTTCCTCCAGAATAGGTGGCCACGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529360.1
CDS-3UTR CAA 90 bp AATGAACTCAGTCAGGGAGCTCAGGGCCACGCTTTGTCATTTGCCTTCAAAGAAGCTCAGGGCCACGCTTaGTCATTTGCCTTCAAAGAA +
Preference number: 5 (lower is better)
Translates to: NELSQGAQGHALSFAFKEAQGHA*SFAFKE
Trigger: TTCTTTGAAGGCAAATGACAAAGCGTGGCCCTGAGC...TTCTTTGAAGGCAAATGACAAAGCGTGGCCCTGAGCTCCCTGACTGAGTTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR CAA 90 bp GCATCCTTGAGAGTCCAAATGAACTCAGTCAGGGAGCTCAGGGCCACGCTTTGTGCGAACAGGAAAAACTaGAAATCAAGTCCTTCTTTG +
Preference number: 5 (lower is better)
Translates to: ASLRVQMNSVRELRATLCANRKN*KSSPSL
Trigger: CAAAGAAGGACTTGATTTCAAGTTTTTCCTGTTCGC...ACAAAGCGTGGCCCTGAGCTCCCTGACTGAGTTCATTTGGACTCTCAAGGATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS CCA 90 bp GCCAGCTTTACACACATTCAAGCTGACAAGCCAGATCTTAGGCTCTaGACTCTGAAAGATCTGGTTTCACTGGCTTTGCCCTTTACTAGT +
Preference number: 5 (lower is better)
Translates to: ASFTHIQADKPDLRL*TLKDLVSLALPFTS
Trigger: ACTAGTAAAGGGCAAAGCCAGTGAAACCAGATCTTTCAGAGTCCAGAGCCTAAGATCTGGCTTGTCAGCTTGAATGTGTGTAAAGCTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529360.1
CDS-3UTR CAA 90 bp AGGGAGCTCAGGGCCACGCTTTGTCATTTGCCTTCAAAGAAATTGCACTCTATCGCCACGCTTTGTCATTaGCCTTCAAAGAAATTGCAC +
Preference number: 5 (lower is better)
Translates to: RELRATLCHLPSKKLHSIATLCH*PSKKLH
Trigger: GTGCAATTTCTTTGAAGGCAAATGACAAAGCGTGGC...GATAGAGTGCAATTTCTTTGAAGGCAAATGACAAAGCGTGGCCCTGAGCTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS-3UTR CAA 90 bp GAAAACCCAAGACCCAGACAGATAAACTGGACGGAATGGCATAGAGAGTGTTTAAGCTCCAGGGCATCCTaGAGAGTCCAAATGAACTCA +
Preference number: 5 (lower is better)
Translates to: ENPRPRQINWTEWHRECLSSRAS*RVQMNS
Trigger: TGAGTTCATTTGGACTCTCAAGGATGCCCTGGAGCT...TAAACACTCTCTATGCCATTCCGTCCAGTTTATCTGTCTGGGTCTTGGGTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS TCA 90 bp TTACACACATTCAAGCTGACAAGCCAGATCTTAGGCTCTGGACTCTaGAAGATCTGGTTTCACTGGCTTTGCCCTTTACTAGTTTGGACA +
Preference number: 5 (lower is better)
Translates to: LHTFKLTSQILGSGL*KIWFHWLCPLLVWT
Trigger: TGTCCAAACTAGTAAAGGGCAAAGCCAGTGAAACCAGATCTTTCAGAGTCCAGAGCCTAAGATCTGGCTTGTCAGCTTGAATGTGTGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529360.1
CDS CCA 90 bp GTATGTTTAAATATCCCGTGGCCACCTATTCTGGAGGAAATAAGATaGCAGACACCATATGGACCCACAAGATTCCAGATGCCAGCTTTA +
Preference number: 5 (lower is better)
Translates to: VCLNIPWPPILEEIR*QTPYGPTRFQMPAL
Trigger: TAAAGCTGGCATCTGGAATCTTGTGGGTCCATATGGTGTCTGCCATCTTATTTCCTCCAGAATAGGTGGCCACGGGATATTTAAACATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529360.1
CDS-3UTR CAA 90 bp AAAGCGAACAGGAAAAACTTGAAATCAAGTCCTTCTTTGAAGAGGTGGGGAGGAATTAGGGAGAGAAACTaGTCAGCTGCTCGTCCATAT +
Preference number: 5 (lower is better)
Translates to: KANRKNLKSSPSLKRWGGIRERN*SAARPY
Trigger: ATATGGACGAGCAGCTGACAAGTTTCTCTCCCTAAT...TCCTCCCCACCTCTTCAAAGAAGGACTTGATTTCAAGTTTTTCCTGTTCGCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS GCA 72 bp GCGCACAGCACTGAGATCGTCTGCACCCCCAGGAGCTaGCCGAGGGCCTTGCCGCTCCAGGATTCGCACCAC +
Preference number: 6 (lower is better)
Translates to: AHSTEIVCTPRS*PRALPLQDSHH
Trigger: GTGGTGCGAATCCTGGAGCGGCAAGGCCCTCGGGCAGCTCCTGGGGGTGCAGACGATCTCAGTGCTGTGCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000524416.1
CDS CAA 72 bp GAGATCGTCTGCACCCCCAGGAGCTGCCCGAGGGCCTaGCCGCTCCAGGATTCGCACCACCTGGGACCAGTG +
Preference number: 6 (lower is better)
Translates to: EIVCTPRSCPRA*PLQDSHHLGPV
Trigger: CACTGGTCCCAGGTGGTGCGAATCCTGGAGCGGCAAGGCCCTCGGGCAGCTCCTGGGGGTGCAGACGATCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000524416.1
CDS TCA 72 bp AACCTGGCCGGGCCCGGTTGCTGCTGCGGTGTTAGGTaGGTTCAGGCCGCCGCCATCGCTTCTCAAGCGCAC +
Preference number: 6 (lower is better)
Translates to: NLAGPGCCCGVR*VQAAAIASQAH
Trigger: GTGCGCTTGAGAAGCGATGGCGGCGGCCTGAACTCACCTAACACCGCAGCAGCAACCGGGCCCGGCCAGGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000524416.1
CDS GCA 72 bp CAGCAGGGGCCCAGGGCCTGTGGGGGCCGAGGGAACTaGACGGTCCTCTGCCAGCAGTGTCAACATCTGGTA +
Preference number: 6 (lower is better)
Translates to: QQGPRACGGRGN*TVLCQQCQHLV
Trigger: TACCAGATGTTGACACTGCTGGCAGAGGACCGTGCAGTTCCCTCGGCCCCCACAGGCCCTGGGCCCCTGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000524416.1
CDS GCA 72 bp CTGGTAAGTGTGGTTGCGCACAGCACTGAGATCGTCTaGACCCCCAGGAGCTGCCCGAGGGCCTTGCCGCTC +
Preference number: 6 (lower is better)
Translates to: LVSVVAHSTEIV*TPRSCPRALPL
Trigger: GAGCGGCAAGGCCCTCGGGCAGCTCCTGGGGGTGCAGACGATCTCAGTGCTGTGCGCAACCACACTTACCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000524416.1
CDS CAA 90 bp CACAGCACTGAGATCGTCTGCACCCCCAGGAGCTGCCCGAGGGCCTaGCCGCTCCAGGATTCGCACCACCTGGGACCAGTGATTCTTGAA +
Preference number: 6 (lower is better)
Translates to: HSTEIVCTPRSCPRA*PLQDSHHLGPVILE
Trigger: TTCAAGAATCACTGGTCCCAGGTGGTGCGAATCCTGGAGCGGCAAGGCCCTCGGGCAGCTCCTGGGGGTGCAGACGATCTCAGTGCTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000524416.1
CDS GCA 72 bp AGGGCCTGTGGGGGCCGAGGGAACTGCACGGTCCTCTaGCAGCAGTGTCAACATCTGGTAAGTGTGGTTGCG +
Preference number: 6 (lower is better)
Translates to: RACGGRGNCTVL*QQCQHLVSVVA
Trigger: CGCAACCACACTTACCAGATGTTGACACTGCTGGCAGAGGACCGTGCAGTTCCCTCGGCCCCCACAGGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000524416.1
CDS GCA 72 bp AGCTGCCATGTCAACACACGGGTCAGCAGATCCTCGTaGAGAGCAAACTCCAGCAGGGGCCCAGGGCCTGTG +
Preference number: 6 (lower is better)
Translates to: SCHVNTRVSRSS*RANSSRGPGPV
Trigger: CACAGGCCCTGGGCCCCTGCTGGAGTTTGCTCTGCACGAGGATCTGCTGACCCGTGTGTTGACATGGCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000524416.1
CDS GCA 72 bp TCCAGCAGGGTGAGCAGAGCCTCACGAACTGGACCATaGCGCAACAGTGGCTGGCGAGCTTCGCTCACTAGC +
Preference number: 6 (lower is better)
Translates to: SSRVSRASRTGP*RNSGWRASLTS
Trigger: GCTAGTGAGCGAAGCTCGCCAGCCACTGTTGCGGCATGGTCCAGTTCGTGAGGCTCTGCTCACCCTGCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000524416.1
CDS GCA 72 bp GAGGCATGCTCTGGACGAGGTGGGCTGGGGGCGTGGTaGCGACAACAGCGTGGGATTAGGGAGAGAAACTTG +
Preference number: 6 (lower is better)
Translates to: EACSGRGGLGAW*RQQRGIRERNL
Trigger: CAAGTTTCTCTCCCTAATCCCACGCTGTTGTCGGCACCACGCCCCCAGCCCACCTCGTCCAGAGCATGCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000524416.1
ENST00000532797.1
CDS TCA 72 bp GTGTCAACATCTGGTAAGTGTGGTTGCGCACAGCACTaGGATCGTCTGCACCCCCAGGAGCTGCCCGAGGGC +
Preference number: 6 (lower is better)
Translates to: VSTSGKCGCAQH*DRLHPQELPEG
Trigger: GCCCTCGGGCAGCTCCTGGGGGTGCAGACGATCTCAGTGCTGTGCGCAACCACACTTACCAGATGTTGACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000524416.1
CDS CCA 72 bp CCGGGGTACTGTCGTCACAGAAGAGGAGTCCACACTTaGGCTTCCAGGACCCGTGATGTCCTCCCTTCTCCC +
Preference number: 6 (lower is better)
Translates to: PGYCRHRRGVHT*ASRTRDVLPSP
Trigger: GGGAGAAGGGAGGACATCACGGGTCCTGGAAGCCCAAGTGTGGACTCCTCTTCTGTGACGACAGTACCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265978.8
CDS CAA 72 bp TCCCCAGCTCCCTCCTTTGGCACCAGACGAACCTTCTaGGCCCCCTCAGGCCATGATCCTGGCACTCCATTG +
Preference number: 6 (lower is better)
Translates to: SPAPSFGTRRTF*APSGHDPGTPL
Trigger: CAATGGAGTGCCAGGATCATGGCCTGAGGGGGCCAAGAAGGTTCGTCTGGTGCCAAAGGAGGGAGCTGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000524416.1
CDS CAA 72 bp GCCGGGGTACTGTCGTCACAGAAGAGGAGTCCACACTaGGGCTTCCAGGACCTCGTGCCCATGAGGCATGCT +
Preference number: 6 (lower is better)
Translates to: AGVLSSQKRSPH*GFQDLVPMRHA
Trigger: AGCATGCCTCATGGGCACGAGGTCCTGGAAGCCCAAGTGTGGACTCCTCTTCTGTGACGACAGTACCCCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449352.7
ENST00000524416.1
ENST00000532797.1
CDS GCA 72 bp TCCTCGACCCCATCCCCAAGCTCATCCCATTGCAGCTaGCATGTCAACACACGGGTCAGCAGATCCTCGTGC +
Preference number: 6 (lower is better)
Translates to: SSTPSPSSSHCS*HVNTRVSRSSC
Trigger: GCACGAGGATCTGCTGACCCGTGTGTTGACATGGCAGCTGCAATGGGATGAGCTTGGGGATGGGGTCGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000524416.1
CDS GCA 72 bp GACAAAGCCATGAGAAGAAGTAGGGCATCACGGGCCTaGTGGCCCAGGGTGCCCTCTCGATGCACAAAAGGG +
Preference number: 6 (lower is better)
Translates to: DKAMRRSRASRA*WPRVPSRCTKG
Trigger: CCCTTTTGTGCATCGAGAGGGCACCCTGGGCCAGCAGGCCCGTGATGCCCTACTTCTTCTCATGGCTTTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000524416.1
CDS GCA 72 bp GCTGGCACTCCCAGCCAGTCTTCCCGTCGCAGACAGTaGCAATCATCCCCTGGAACCTCAATCTTTCGAGGC +
Preference number: 6 (lower is better)
Translates to: AGTPSQSSRRRQ*QSSPGTSIFRG
Trigger: GCCTCGAAAGATTGAGGTTCCAGGGGATGATTGGCACTGTCTGCGACGGGAAGACTGGCTGGGAGTGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000524416.1
CDS GCA 72 bp CGAGCAACGAGGGTGTCGAGGATGGTGTGGGTGTCATaGCGGTGCAACAACAGGAATCGCAGGAAGGTACGG +
Preference number: 6 (lower is better)
Translates to: RATRVSRMVWVS*RCNNRNRRKVR
Trigger: CCGTACCTTCCTGCGATTCCTGTTGTTGCACCGGCATGACACCCACACCATCCTCGACACCCTCGTTGCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000524416.1
CDS GCA 72 bp ACGGCAGGCTCGGACACAGCGGTCCACACCACGACGTaGCTCACGCAGATACTCCAGGTAATTGTCTTCCAG +
Preference number: 6 (lower is better)
Translates to: TAGSDTAVHTTT*LTQILQVIVFQ
Trigger: CTGGAAGACAATTACCTGGAGTATCTGCGTGAGGCACGTCGTGGTGTGGACCGCTGTGTCCGAGCCTGCCGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000524416.1
ENST00000532797.1
CDS CCA 72 bp GCAGAACTCCAGGGAACTCATGAAGAGTGCAAGGGCTaGCACTCCCAGCCAGTCTTCCCGTCGCAGACAGTG +
Preference number: 6 (lower is better)
Translates to: AELQGTHEECKG*HSQPVFPSQTV
Trigger: CACTGTCTGCGACGGGAAGACTGGCTGGGAGTGCCAGCCCTTGCACTCTTCATGAGTTCCCTGGAGTTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000524416.1
CDS CAA 72 bp CATGAGGCAGGTCTCGGGATCAGCCATGACTGGGGTTaGGAGATTGGCCCCTTGAGGTATACGGTGCCCAGG +
Preference number: 6 (lower is better)
Translates to: HEAGLGISHDWG*EIGPLRYTVPR
Trigger: CCTGGGCACCGTATACCTCAAGGGGCCAATCTCCAAACCCCAGTCATGGCTGATCCCGAGACCTGCCTCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000524416.1
CDS CAA 72 bp AGTAGCTTACCAGTGAAGGGCTGGCTTGGCAGCTGGTaGAGAGTCCGCAAAGGGCTGCTGAGGAAGGGGCCA +
Preference number: 6 (lower is better)
Translates to: SSLPVKGWLGSW*RVRKGLLRKGP
Trigger: TGGCCCCTTCCTCAGCAGCCCTTTGCGGACTCTCAACCAGCTGCCAAGCCAGCCCTTCACTGGTAAGCTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS CAA 90 bp CTGGGGGCGTGGTGCCGACAACAGCGTGGGATTAGGGAGAGAAACTaGTCAGCTGCTCGTCCATATAGGTCCACATCACGAACAGCCGGC +
Preference number: 6 (lower is better)
Translates to: LGAWCRQQRGIRERN*SAARPYRSTSRTAG
Trigger: GCCGGCTGTTCGTGATGTGGACCTATATGGACGAGCAGCTGACAAGTTTCTCTCCCTAATCCCACGCTGTTGTCGGCACCACGCCCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000524416.1
ENST00000532797.1
CDS CCA 72 bp AGATTTCTAAATCGTTCACTCACGGAACGCCGAACCTaGCCGGGCCCGGTTGCTGCTGCGGTGTTAGGTGAG +
Preference number: 6 (lower is better)
Translates to: RFLNRSLTERRT*PGPVAAAVLGE
Trigger: CTCACCTAACACCGCAGCAGCAACCGGGCCCGGCCAGGTTCGGCGTTCCGTGAGTGAACGATTTAGAAATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000524416.1
CDS CCA 72 bp GCTGCCCATGGAGCCAGAGGTTATACCAGGCTGGAATaGCAAGCCCAGAGGTCACTGGCCAGTCCAGATTTC +
Preference number: 6 (lower is better)
Translates to: AAHGARGYTRLE*QAQRSLASPDF
Trigger: GAAATCTGGACTGGCCAGTGACCTCTGGGCTTGCCATTCCAGCCTGGTATAACCTCTGGCTCCATGGGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000524416.1
CDS CCA 72 bp CTGCCAATACGAGCAACGAGGGTGTCGAGGATGGTGTaGGTGTCATGCCGGTGCAACAACAGGAATCGCAGG +
Preference number: 6 (lower is better)
Translates to: LPIRATRVSRMV*VSCRCNNRNRR
Trigger: CCTGCGATTCCTGTTGTTGCACCGGCATGACACCCACACCATCCTCGACACCCTCGTTGCTCGTATTGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000524416.1
CDS CCA 72 bp CTAAGTAGCTTACCAGTGAAGGGCTGGCTTGGCAGCTaGTTGAGAGTCCGCAAAGGGCTGCTGAGGAAGGGG +
Preference number: 6 (lower is better)
Translates to: LSSLPVKGWLGS*LRVRKGLLRKG
Trigger: CCCCTTCCTCAGCAGCCCTTTGCGGACTCTCAACCAGCTGCCAAGCCAGCCCTTCACTGGTAAGCTACTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS CCA 72 bp GGAAGGCCTAGGCTAAGTAGCTTACCAGTGAAGGGCTaGCTTGGCAGCTGGTTGAGAGTCCGCAAAGGGCTG +
Preference number: 6 (lower is better)
Translates to: GRPRLSSLPVKG*LGSWLRVRKGL
Trigger: CAGCCCTTTGCGGACTCTCAACCAGCTGCCAAGCCAGCCCTTCACTGGTAAGCTACTTAGCCTAGGCCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS CAA 72 bp GCCCAGTCCAACTTGCCACGGGCAATGAGGTACTTCTaGGCTTTGGACAGCAGTGCTGGGAAGTCCTCCTGG +
Preference number: 6 (lower is better)
Translates to: AQSNLPRAMRYF*ALDSSAGKSSW
Trigger: CCAGGAGGACTTCCCAGCACTGCTGTCCAAAGCCAAGAAGTACCTCATTGCCCGTGGCAAGTTGGACTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000529360.1
CDS TCA 72 bp ATGAAGGCTCCTGGGCCACACAAACACACAGCTGGCTaGGAAGTAGCACCAAGCCTTCATCCAGTGCTGGGC +
Preference number: 6 (lower is better)
Translates to: MKAPGPHKHTAG*EVAPSLHPVLG
Trigger: GCCCAGCACTGGATGAAGGCTTGGTGCTACTTCTCAGCCAGCTGTGTGTTTGTGTGGCCCAGGAGCCTTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000524416.1
CDS GCA 72 bp CCAGTCTGCTTCATCCGGTCTGTAGGAGCCAGTAGCTaGCCATGGAGCCAGAGGTTATACCAGGCTGGAATG +
Preference number: 6 (lower is better)
Translates to: PVCFIRSVGASS*PWSQRLYQAGM
Trigger: CATTCCAGCCTGGTATAACCTCTGGCTCCATGGGCAGCTACTGGCTCCTACAGACCGGATGAAGCAGACTGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000524416.1
CDS CCA 72 bp GAAGACCATGAGGCAGGTCTCGGGATCAGCCATGACTaGGGTTTGGAGATTGGCCCCTTGAGGTATACGGTG +
Preference number: 6 (lower is better)
Translates to: EDHEAGLGISHD*GLEIGPLRYTV
Trigger: CACCGTATACCTCAAGGGGCCAATCTCCAAACCCCAGTCATGGCTGATCCCGAGACCTGCCTCATGGTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000524416.1
CDS GCA 72 bp CGAGCTTCGCTCACTAGCATTTCAAATAGTTTCAGTTaGTCAGCCCGCCGTTCCTCGACCCCATCCCCAAGC +
Preference number: 6 (lower is better)
Translates to: RASLTSISNSFS*SARRSSTPSPS
Trigger: GCTTGGGGATGGGGTCGAGGAACGGCGGGCTGAGCAACTGAAACTATTTGAAATGCTAGTGAGCGAAGCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000524416.1
CDS CCA 72 bp AGTTACTGCCAATACGAGCAACGAGGGTGTCGAGGATaGTGTGGGTGTCATGCCGGTGCAACAACAGGAATC +
Preference number: 6 (lower is better)
Translates to: SYCQYEQRGCRG*CGCHAGATTGI
Trigger: GATTCCTGTTGTTGCACCGGCATGACACCCACACCATCCTCGACACCCTCGTTGCTCGTATTGGCAGTAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000524416.1
CDS CCA 72 bp AGAGCCTCACGAACTGGACCATGCCGCAACAGTGGCTaGCGAGCTTCGCTCACTAGCATTTCAAATAGTTTC +
Preference number: 6 (lower is better)
Translates to: RASRTGPCRNSG*RASLTSISNSF
Trigger: GAAACTATTTGAAATGCTAGTGAGCGAAGCTCGCCAGCCACTGTTGCGGCATGGTCCAGTTCGTGAGGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000524416.1
CDS CAA 72 bp TGGTGCCGACAACAGCGTGGGATTAGGGAGAGAAACTaGTCAGCTGCTCGTCCATATAGGTCCACATCACGA +
Preference number: 6 (lower is better)
Translates to: WCRQQRGIRERN*SAARPYRSTSR
Trigger: TCGTGATGTGGACCTATATGGACGAGCAGCTGACAAGTTTCTCTCCCTAATCCCACGCTGTTGTCGGCACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000524416.1
ENST00000532797.1
CDS CCA 72 bp GTTATACCAGGCTGGAATGGCAAGCCCAGAGGTCACTaGCCAGTCCAGATTTCTAAATCGTTCACTCACGGA +
Preference number: 6 (lower is better)
Translates to: VIPGWNGKPRGH*PVQISKSFTHG
Trigger: TCCGTGAGTGAACGATTTAGAAATCTGGACTGGCCAGTGACCTCTGGGCTTGCCATTCCAGCCTGGTATAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000524416.1
CDS CCA 72 bp AGATACTCCGTAGGAAAAGTTCCAGATAGGCGGTACTaGCGATCATCTCCTCCACAGAGGTCTTGTGCAAGG +
Preference number: 6 (lower is better)
Translates to: RYSVGKVPDRRY*RSSPPQRSCAR
Trigger: CCTTGCACAAGACCTCTGTGGAGGAGATGATCGCCAGTACCGCCTATCTGGAACTTTTCCTACGGAGTATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000524416.1
CDS CCA 72 bp ACATCACGAACAGCCGGCTTCTGGCTCAGCATAACGTaGTTACATGGAACAAGATACCTGAGAACCAGCTGC +
Preference number: 6 (lower is better)
Translates to: TSRTAGFWLSIT*LHGTRYLRTSC
Trigger: GCAGCTGGTTCTCAGGTATCTTGTTCCATGTAACCACGTTATGCTGAGCCAGAAGCCGGCTGTTCGTGATGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000524416.1
CDS TCA 72 bp TCTCCTCCACAGAGGTCTTGTGCAAGGCAGGACCCATaGCAGGCACCAGGAACCCATTATGGATATAATCAA +
Preference number: 6 (lower is better)
Translates to: SPPQRSCARQDP*QAPGTHYGYNQ
Trigger: TTGATTATATCCATAATGGGTTCCTGGTGCCTGTCATGGGTCCTGCCTTGCACAAGACCTCTGTGGAGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000524416.1
CDS CCA 72 bp CGTCCATATAGGTCCACATCACGAACAGCCGGCTTCTaGCTCAGCATAACGTGGTTACATGGAACAAGATAC +
Preference number: 6 (lower is better)
Translates to: RPYRSTSRTAGF*LSITWLHGTRY
Trigger: GTATCTTGTTCCATGTAACCACGTTATGCTGAGCCAGAAGCCGGCTGTTCGTGATGTGGACCTATATGGACG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000524416.1
CDS CCA 72 bp TTCTTGGCTTTGGACAGCAGTGCTGGGAAGTCCTCCTaGGAAGCCGCAAAGTTCTCAATCTTATTCTTCACA +
Preference number: 6 (lower is better)
Translates to: FLALDSSAGKSS*EAAKFSILFFT
Trigger: TGTGAAGAATAAGATTGAGAACTTTGCGGCTTCCCAGGAGGACTTCCCAGCACTGCTGTCCAAAGCCAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265978.8
ENST00000449352.7
ENST00000529360.1
CDS CCA 72 bp ACACACATTCAAGCTGACAAGCCAGATCTTAGGCTCTaGACTCTGAAAGATCTGGTTTCACTGGCTTTGCCC +
Preference number: 6 (lower is better)
Translates to: THIQADKPDLRL*TLKDLVSLALP
Trigger: GGGCAAAGCCAGTGAAACCAGATCTTTCAGAGTCCAGAGCCTAAGATCTGGCTTGTCAGCTTGAATGTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529360.1
CDS TCA 72 bp AGACGTACAGACAGACACAGGGACACAAGTATGACATaGCACGTATCTGGAAGTGATGCAAGCAGGATGGAT +
Preference number: 6 (lower is better)
Translates to: RRTDRHRDTSMT*HVSGSDASRMD
Trigger: ATCCATCCTGCTTGCATCACTTCCAGATACGTGTCATGTCATACTTGTGTCCCTGTGTCTGTCTGTACGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524416.1
CDS CCA 72 bp AATATCCCGTGGCCACCTATTCTGGAGGAAATAAGATaGCAGACACCATATGGACCCACAAGATTCCAGATG +
Preference number: 6 (lower is better)
Translates to: NIPWPPILEEIR*QTPYGPTRFQM
Trigger: CATCTGGAATCTTGTGGGTCCATATGGTGTCTGCCATCTTATTTCCTCCAGAATAGGTGGCCACGGGATATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529360.1
CDS TCA 72 bp TTCAAGCTGACAAGCCAGATCTTAGGCTCTGGACTCTaGAAGATCTGGTTTCACTGGCTTTGCCCTTTACTA +
Preference number: 6 (lower is better)
Translates to: FKLTSQILGSGL*KIWFHWLCPLL
Trigger: TAGTAAAGGGCAAAGCCAGTGAAACCAGATCTTTCAGAGTCCAGAGCCTAAGATCTGGCTTGTCAGCTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529360.1
CDS CCA 72 bp ACCTATTCTGGAGGAAATAAGATGGCAGACACCATATaGACCCACAAGATTCCAGATGCCAGCTTTACACAC +
Preference number: 6 (lower is better)
Translates to: TYSGGNKMADTI*THKIPDASFTH
Trigger: GTGTGTAAAGCTGGCATCTGGAATCTTGTGGGTCCATATGGTGTCTGCCATCTTATTTCCTCCAGAATAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529360.1
CDS CAA 72 bp AGGCTCTGGACTCTGAAAGATCTGGTTTCACTGGCTTaGCCCTTTACTAGTTTGGACAGGTCAAAATTGTCC +
Preference number: 6 (lower is better)
Translates to: RLWTLKDLVSLA*PFTSLDRSKLS
Trigger: GGACAATTTTGACCTGTCCAAACTAGTAAAGGGCAAAGCCAGTGAAACCAGATCTTTCAGAGTCCAGAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529360.1
CDS CCA 72 bp AAGATCTGGTTTCACTGGCTTTGCCCTTTACTAGTTTaGACAGGTCAAAATTGTCCAAGCCTTAGTTTCCTA +
Preference number: 6 (lower is better)
Translates to: KIWFHWLCPLLV*TGQNCPSLSFL
Trigger: TAGGAAACTAAGGCTTGGACAATTTTGACCTGTCCAAACTAGTAAAGGGCAAAGCCAGTGAAACCAGATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529360.1