Pregenerated sensors for FAM160A1-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000251611Ensembl transcript IDs: ENST00000508847.1
Found 13 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GTTGTCCGACTCCTTCCACTAGGCAGAACCCGAGAGACGAGCCTTTaGCGGGACGGTGAACGATTGTGCTGTGTACGGCGGTGTGCGTGC | + |
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Preference number: 5 (lower is better) Translates to: VVRLLPLGRTRETSL*RDGERLCCVRRCAC Trigger: GCACGCACACCGCCGTACACAGCACAATCGTTCACCGTCCCGCCAAAGGCTCGTCTCTCGGGTTCTGCCTAGTGGAAGGAGTCGGACAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508847.1 |
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| CDS GCA 90 bp | GCCGTCAAACCTTTGGGAAGCAAGAAATCCGAAACGCCCGTGACGTaGGGCGTTGTCCGACTCCTTCCACTAGGCAGAACCCGAGAGACG | + |
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Preference number: 5 (lower is better) Translates to: AVKPLGSKKSETPVT*GVVRLLPLGRTRET Trigger: CGTCTCTCGGGTTCTGCCTAGTGGAAGGAGTCGGACAACGCCGCACGTCACGGGCGTTTCGGATTTCTTGCTTCCCAAAGGTTTGACGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508847.1 |
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| CDS CCA 90 bp | GAGCTTGTCACAGGTGAAAGGCTGATGAATCTGGAGAGATACTTGTaGCAAGTACCCGGTGTTCCTGCAGTCATCCACAAGCGCAGCAGT | + |
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Preference number: 5 (lower is better) Translates to: ELVTGERLMNLERYL*QVPGVPAVIHKRSS Trigger: ACTGCTGCGCTTGTGGATGACTGCAGGAACACCGGGTACTTGCCACAAGTATCTCTCCAGATTCATCAGCCTTTCACCTGTGACAAGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508847.1 |
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| CDS CAA 72 bp | AGCTGGGCCGGGGCGCCGGTGGCCGCCGTCAAACCTTaGGGAAGCAAGAAATCCGAAACGCCCGTGACGTGC | + |
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Preference number: 6 (lower is better) Translates to: SWAGAPVAAVKP*GSKKSETPVTC Trigger: GCACGTCACGGGCGTTTCGGATTTCTTGCTTCCCAAAGGTTTGACGGCGGCCACCGGCGCCCCGGCCCAGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508847.1 |
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| CDS CAA 90 bp | GGAAAGCAGAGCTGGGCCGGGGCGCCGGTGGCCGCCGTCAAACCTTaGGGAAGCAAGAAATCCGAAACGCCCGTGACGTGCGGCGTTGTC | + |
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Preference number: 6 (lower is better) Translates to: GKQSWAGAPVAAVKP*GSKKSETPVTCGVV Trigger: GACAACGCCGCACGTCACGGGCGTTTCGGATTTCTTGCTTCCCAAAGGTTTGACGGCGGCCACCGGCGCCCCGGCCCAGCTCTGCTTTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508847.1 |
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| CDS TCA 72 bp | AGGCAGAACCCGAGAGACGAGCCTTTGGCGGGACGGTaGACGATTGTGCTGTGTACGGCGGTGTGCGTGCGT | + |
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Preference number: 6 (lower is better) Translates to: RQNPRDEPLAGR*TIVLCTAVCVR Trigger: ACGCACGCACACCGCCGTACACAGCACAATCGTTCACCGTCCCGCCAAAGGCTCGTCTCTCGGGTTCTGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508847.1 |
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| CDS CCA 72 bp | TCAGCAAAGGAAAGCAGAGCTGGGCCGGGGCGCCGGTaGCCGCCGTCAAACCTTTGGGAAGCAAGAAATCCG | + |
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Preference number: 6 (lower is better) Translates to: SAKESRAGPGRR*PPSNLWEARNP Trigger: CGGATTTCTTGCTTCCCAAAGGTTTGACGGCGGCCACCGGCGCCCCGGCCCAGCTCTGCTTTCCTTTGCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508847.1 |
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| CDS CCA 72 bp | CTCCTTCCACTAGGCAGAACCCGAGAGACGAGCCTTTaGCGGGACGGTGAACGATTGTGCTGTGTACGGCGG | + |
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Preference number: 6 (lower is better) Translates to: LLPLGRTRETSL*RDGERLCCVRR Trigger: CCGCCGTACACAGCACAATCGTTCACCGTCCCGCCAAAGGCTCGTCTCTCGGGTTCTGCCTAGTGGAAGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508847.1 |
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| CDS GCA 72 bp | CCTTTGGGAAGCAAGAAATCCGAAACGCCCGTGACGTaGGGCGTTGTCCGACTCCTTCCACTAGGCAGAACC | + |
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Preference number: 6 (lower is better) Translates to: PLGSKKSETPVT*GVVRLLPLGRT Trigger: GGTTCTGCCTAGTGGAAGGAGTCGGACAACGCCGCACGTCACGGGCGTTTCGGATTTCTTGCTTCCCAAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508847.1 |
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| CDS CAA 90 bp | ACTGAGCTTGTCACAGGTGAAAGGCTGATGAATCTGGAGAGATACTaGTGGCAAGTACCCGGTGTTCCTGCAGTCATCCACAAGCGCAGC | + |
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Preference number: 6 (lower is better) Translates to: TELVTGERLMNLERY*WQVPGVPAVIHKRS Trigger: GCTGCGCTTGTGGATGACTGCAGGAACACCGGGTACTTGCCACAAGTATCTCTCCAGATTCATCAGCCTTTCACCTGTGACAAGCTCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508847.1 |
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| CDS CAA 72 bp | GTCACAGGTGAAAGGCTGATGAATCTGGAGAGATACTaGTGGCAAGTACCCGGTGTTCCTGCAGTCATCCAC | + |
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Preference number: 6 (lower is better) Translates to: VTGERLMNLERY*WQVPGVPAVIH Trigger: GTGGATGACTGCAGGAACACCGGGTACTTGCCACAAGTATCTCTCCAGATTCATCAGCCTTTCACCTGTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508847.1 |
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| CDS CCA 72 bp | ACAGGTGAAAGGCTGATGAATCTGGAGAGATACTTGTaGCAAGTACCCGGTGTTCCTGCAGTCATCCACAAG | + |
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Preference number: 6 (lower is better) Translates to: TGERLMNLERYL*QVPGVPAVIHK Trigger: CTTGTGGATGACTGCAGGAACACCGGGTACTTGCCACAAGTATCTCTCCAGATTCATCAGCCTTTCACCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508847.1 |
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| CDS CAA 72 bp | CTTGTTCTTCCCCAGCTTTTACTTAGGAGCCACTTCTaGACTGAGCTTGTCACAGGTGAAAGGCTGATGAAT | + |
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Preference number: 6 (lower is better) Translates to: LVLPQLLLRSHF*TELVTGERLMN Trigger: ATTCATCAGCCTTTCACCTGTGACAAGCTCAGTCAAGAAGTGGCTCCTAAGTAAAAGCTGGGGAAGAACAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000508847.1 |
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