RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM160A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000164142

Ensembl transcript IDs: ENST00000435205.6, ENST00000503146.5, ENST00000505231.1, ENST00000508198.5, ENST00000511501.5, ENST00000512597.5, ENST00000513086.5, ENST00000513962.5

Found 694 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGGGGCCTTCTAATGAACCCCATTACTCGGAAGGCAGCATTTCCATaGAGAGTGAGTCGCCAGCAGGCACTTGGCTTTGCAGGGCTCCAG +
Preference number: 1 (lower is better)
Translates to: WGLLMNPITRKAAFP*RVSRQQALGFAGLQ
Trigger: CTGGAGCCCTGCAAAGCCAAGTGCCTGCTGGCGACTCACTCTGCATGGAAATGCTGCCTTCCGAGTAATGGGGTTCATTAGAAGGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR TCA 90 bp ATTCCAAATTCTCTCCAAGGACATCCGACTTCCCAGGCAGATAGCTaGGGCTCTGCCGGCACCATAAGGCAACACACGCTGGGGACGACA +
Preference number: 1 (lower is better)
Translates to: IPNSLQGHPTSQADS*GSAGTIRQHTLGTT
Trigger: TGTCGTCCCCAGCGTGTGTTGCCTTATGGTGCCGGCAGAGCCTCAGCTATCTGCCTGGGAAGTCGGATGTCCTTGGAGAGAATTTGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
3UTR GCA 90 bp GGCAGCATTTCCATGCAGAGTGAGTCGCCAGCAGGCACTTGGCTTTaGAGGGCTCCAGGTGACCTGTTTGCATTTACATCCAAGGTCCCA +
Preference number: 1 (lower is better)
Translates to: GSISMQSESPAGTWL*RAPGDLFAFTSKVP
Trigger: TGGGACCTTGGATGTAAATGCAAACAGGTCACCTGGAGCCCTGCAAAGCCAAGTGCCTGCTGGCGACTCACTCTGCATGGAAATGCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR GCA 90 bp TCAAGATTCCTGAAGCACAAAAGGGCCTCCACTGCTCCACAGCATTaGAGGTGTGGTTCTTCCGCCACTGCCCTGCCTGTGCATGAAAGG +
Preference number: 1 (lower is better)
Translates to: SRFLKHKRASTAPQH*RCGSSATALPVHER
Trigger: CCTTTCATGCACAGGCAGGGCAGTGGCGGAAGAACCACACCTGCAATGCTGTGGAGCAGTGGAGGCCCTTTTGTGCTTCAGGAATCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR GCA 90 bp AACATGGCTGTGGCTCTAAGTATAATCCTGCCTCTTGGAGCAGGCTaGAAAGCAGCAGAGGGACGCTCATACAGCACGTTGGGGCCTTCT +
Preference number: 1 (lower is better)
Translates to: NMAVALSIILPLGAG*KAAEGRSYSTLGPS
Trigger: AGAAGGCCCCAACGTGCTGTATGAGCGTCCCTCTGCTGCTTTGCAGCCTGCTCCAAGAGGCAGGATTATACTTAGAGCCACAGCCATGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR GCA 90 bp GGCACAACCACCAGACCTGTGGCTGCCCTCAGGGCTCCACAGAGATaGCCACAAAGAACAGAGAGAGACAAACCTTCCAATTTCCTTCCA +
Preference number: 1 (lower is better)
Translates to: GTTTRPVAALRAPQR*PQRTERDKPSNFLP
Trigger: TGGAAGGAAATTGGAAGGTTTGTCTCTCTCTGTTCTTTGTGGGCATCTCTGTGGAGCCCTGAGGGCAGCCACAGGTCTGGTGGTTGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR GCA 90 bp ATAATCGTGGTGTGCTGCAGGCATCACGATGAAGGCGGGGCTGTCTaGACTCCTGTGCTTGCGACACTAATACTGTTCTCTCCACTGCAC +
Preference number: 1 (lower is better)
Translates to: IIVVCCRHHDEGGAV*TPVLATLILFSPLH
Trigger: GTGCAGTGGAGAGAACAGTATTAGTGTCGCAAGCACAGGAGTGCAGACAGCCCCGCCTTCATCGTGATGCCTGCAGCACACCACGATTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR CCA 90 bp TCGGAAGGCAGCATTTCCATGCAGAGTGAGTCGCCAGCAGGCACTTaGCTTTGCAGGGCTCCAGGTGACCTGTTTGCATTTACATCCAAG +
Preference number: 1 (lower is better)
Translates to: SEGSISMQSESPAGT*LCRAPGDLFAFTSK
Trigger: CTTGGATGTAAATGCAAACAGGTCACCTGGAGCCCTGCAAAGCCAAGTGCCTGCTGGCGACTCACTCTGCATGGAAATGCTGCCTTCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR CCA 90 bp TTGGAGCAGGCTGCAAAGCAGCAGAGGGACGCTCATACAGCACGTTaGGGCCTTCTAATGAACCCCATTACTCGGAAGGCAGCATTTCCA +
Preference number: 1 (lower is better)
Translates to: LEQAAKQQRDAHTAR*GLLMNPITRKAAFP
Trigger: TGGAAATGCTGCCTTCCGAGTAATGGGGTTCATTAGAAGGCCCCAACGTGCTGTATGAGCGTCCCTCTGCTGCTTTGCAGCCTGCTCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR CCA 90 bp CAGACCTGGGAATCAGTCCACATGACGGCCACAGCCAAGCTGATTTaGAGACACTGGAAACAACTTTCGACCCTGAGTACCCACTGGCTG +
Preference number: 1 (lower is better)
Translates to: QTWESVHMTATAKLI*RHWKQLSTLSTHWL
Trigger: CAGCCAGTGGGTACTCAGGGTCGAAAGTTGTTTCCAGTGTCTCCAAATCAGCTTGGCTGTGGCCGTCATGTGGACTGATTCCCAGGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR GCA 90 bp TGGCATCAGCTACAAGAGACTGCTGTTTCCAGGAAGAGCTCACACTaGAAAGCAGGCTGCCGTTTGCAGCAAACCACACATGACACCAGC +
Preference number: 1 (lower is better)
Translates to: WHQLQETAVSRKSSH*KAGCRLQQTTHDTS
Trigger: GCTGGTGTCATGTGTGGTTTGCTGCAAACGGCAGCCTGCTTTGCAGTGTGAGCTCTTCCTGGAAACAGCAGTCTCTTGTAGCTGATGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR CCA 90 bp ACGGTTTCTCTTCCCCTACATTCTTCCAGCAAGGAGCACAGCGACTaGTGTAGGAGCCTGTCACATAGAGAAGTGTCCACACTCTCGGAC +
Preference number: 1 (lower is better)
Translates to: TVSLPLHSSSKEHSD*CRSLSHREVSTLSD
Trigger: GTCCGAGAGTGTGGACACTTCTCTATGTGACAGGCTCCTACACCAGTCGCTGTGCTCCTTGCTGGAAGAATGTAGGGGAAGAGAAACCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR TCA 90 bp ATCTTGACCTCTCATGATAATCGTGGTGTGCTGCAGGCATCACGATaGAGGCGGGGCTGTCTGCACTCCTGTGCTTGCGACACTAATACT +
Preference number: 1 (lower is better)
Translates to: ILTSHDNRGVLQASR*RRGCLHSCACDTNT
Trigger: AGTATTAGTGTCGCAAGCACAGGAGTGCAGACAGCCCCGCCTTCATCGTGATGCCTGCAGCACACCACGATTATCATGAGAGGTCAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR CCA 90 bp AGGAAGTTAGTGTTATCGTGTGAGTTTGCTGCCAGCACCCCAGCATaGGAAGTTACATTCTCCTGCCTGTCACTGCACACACCAGTCATC +
Preference number: 1 (lower is better)
Translates to: RKLVLSCEFAASTPA*EVTFSCLSLHTPVI
Trigger: GATGACTGGTGTGTGCAGTGACAGGCAGGAGAATGTAACTTCCCATGCTGGGGTGCTGGCAGCAAACTCACACGATAACACTAACTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR CCA 90 bp GAATCAGTCCACATGACGGCCACAGCCAAGCTGATTTGGAGACACTaGAAACAACTTTCGACCCTGAGTACCCACTGGCTGCCCAAATTA +
Preference number: 1 (lower is better)
Translates to: ESVHMTATAKLIWRH*KQLSTLSTHWLPKL
Trigger: TAATTTGGGCAGCCAGTGGGTACTCAGGGTCGAAAGTTGTTTCCAGTGTCTCCAAATCAGCTTGGCTGTGGCCGTCATGTGGACTGATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR CCA 90 bp ATTCAGAAGAGCAGCCCATCCACAACCCTAAACCTCAAACAGACCTaGGAATCAGTCCACATGACGGCCACAGCCAAGCTGATTTGGAGA +
Preference number: 1 (lower is better)
Translates to: IQKSSPSTTLNLKQT*ESVHMTATAKLIWR
Trigger: TCTCCAAATCAGCTTGGCTGTGGCCGTCATGTGGACTGATTCCCAGGTCTGTTTGAGGTTTAGGGTTGTGGATGGGCTGCTCTTCTGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR CCA 90 bp AAAAGTGGACACCCCTCCATCACCAATTCAGCGACTCATGCTTCCTaGCTTGCACAGTTCCTCAGGACTTCCCTGAGAGTGATGAGAAAG +
Preference number: 1 (lower is better)
Translates to: KSGHPSITNSATHAS*LAQFLRTSLRVMRK
Trigger: CTTTCTCATCACTCTCAGGGAAGTCCTGAGGAACTGTGCAAGCCAGGAAGCATGAGTCGCTGAATTGGTGATGGAGGGGTGTCCACTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR TCA 90 bp GGAACTTTAAGTCGGGCCCTGAATTATGAATTGAGGTTAATGTTGTaGTACTCCAGGAACCCTTGGCTCCCTCACCTTTCCTGCCCAGGC +
Preference number: 1 (lower is better)
Translates to: GTLSRALNYELRLML*YSRNPWLPHLSCPG
Trigger: GCCTGGGCAGGAAAGGTGAGGGAGCCAAGGGTTCCTGGAGTATCACAACATTAACCTCAATTCATAATTCAGGGCCCGACTTAAAGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR CCA 90 bp TTCGCACAGTTGCAGGTGTACAATCTTCCTGTGCTGCTGAACAGCTaGAATTCTGACATGGGGCACTTCCAGACATCACCAGACATCACT +
Preference number: 1 (lower is better)
Translates to: FAQLQVYNLPVLLNS*NSDMGHFQTSPDIT
Trigger: AGTGATGTCTGGTGATGTCTGGAAGTGCCCCATGTCAGAATTCCAGCTGTTCAGCAGCACAGGAAGATTGTACACCTGCAACTGTGCGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
3UTR GCA 90 bp CTGCCAGCACCCCAGCATGGGAAGTTACATTCTCCTGCCTGTCACTaGACACACCAGTCATCTCTGTCCTCATTTAAAGTAAGTCTACTT +
Preference number: 1 (lower is better)
Translates to: LPAPQHGKLHSPACH*THQSSLSSFKVSLL
Trigger: AAGTAGACTTACTTTAAATGAGGACAGAGATGACTGGTGTGTGCAGTGACAGGCAGGAGAATGTAACTTCCCATGCTGGGGTGCTGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR CCA 90 bp AGGGCTCCAGGTGACCTGTTTGCATTTACATCCAAGGTCCCAAAGTaGGCTGTACAGTTCCTGTTTCTCTACAAAGTGCAGCTTACTAGC +
Preference number: 1 (lower is better)
Translates to: RAPGDLFAFTSKVPK*AVQFLFLYKVQLTS
Trigger: GCTAGTAAGCTGCACTTTGTAGAGAAACAGGAACTGTACAGCCCACTTTGGGACCTTGGATGTAAATGCAAACAGGTCACCTGGAGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR GCA 90 bp GAGGAGCTCCATCTTTACTCTTCCTTTATAGAACAGAGGCCAAAATaGAGGAGGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATC +
Preference number: 1 (lower is better)
Translates to: EELHLYSSFIEQRPK*RRQQDHSHSCRCTI
Trigger: GATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCCTCCTGCATTTTGGCCTCTGTTCTATAAAGGAAGAGTAAAGATGGAGCTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
3UTR CCA 90 bp CTGATTTGGAGACACTGGAAACAACTTTCGACCCTGAGTACCCACTaGCTGCCCAAATTAAACAGGCAACCCCAATATTCATGTAGCCTG +
Preference number: 1 (lower is better)
Translates to: LIWRHWKQLSTLSTH*LPKLNRQPQYSCSL
Trigger: CAGGCTACATGAATATTGGGGTTGCCTGTTTAATTTGGGCAGCCAGTGGGTACTCAGGGTCGAAAGTTGTTTCCAGTGTCTCCAAATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR TCA 90 bp CACAGAAGTCACTCAGTCTGGAACTTTAAGTCGGGCCCTGAATTATaGATTGAGGTTAATGTTGTGATACTCCAGGAACCCTTGGCTCCC +
Preference number: 1 (lower is better)
Translates to: HRSHSVWNFKSGPEL*IEVNVVILQEPLAP
Trigger: GGGAGCCAAGGGTTCCTGGAGTATCACAACATTAACCTCAATTCATAATTCAGGGCCCGACTTAAAGTTCCAGACTGAGTGACTTCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR GCA 90 bp AATCGTGCAGGATTTGCTCTTCTCCCGTGGATAGACTCAGTTCTCTaGTGTTTTTCTTTGGCATGTCCACGTCACTCCCTAAATAACCCA +
Preference number: 1 (lower is better)
Translates to: NRAGFALLPWIDSVL*CFSLACPRHSLNNP
Trigger: TGGGTTATTTAGGGAGTGACGTGGACATGCCAAAGAAAAACAGCAGAGAACTGAGTCTATCCACGGGAGAAGAGCAAATCCTGCACGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR GCA 90 bp ATCTCTCTACAAGACAGTAAGGCTGAAGCAGTTCTCTCCTCACTCTaGAAGTCTGAATTACAAATGGGCAAAGGTGGTCTGAGACTGGAG +
Preference number: 1 (lower is better)
Translates to: ISLQDSKAEAVLSSL*KSELQMGKGGLRLE
Trigger: CTCCAGTCTCAGACCACCTTTGCCCATTTGTAATTCAGACTTGCAGAGTGAGGAGAGAACTGCTTCAGCCTTACTGTCTTGTAGAGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR CCA 90 bp GCAACAAGGGGCCTAGAATATCTTCCTAATGACTTAAAGCTGATGTaGCATCAGCTACAAGAGACTGCTGTTTCCAGGAAGAGCTCACAC +
Preference number: 1 (lower is better)
Translates to: ATRGLEYLPNDLKLM*HQLQETAVSRKSSH
Trigger: GTGTGAGCTCTTCCTGGAAACAGCAGTCTCTTGTAGCTGATGCCACATCAGCTTTAAGTCATTAGGAAGATATTCTAGGCCCCTTGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR TCA 90 bp CTCCTGATGACCTATAAAAATACCGAATGCGTCCTACCTAACACCTaGCAGACATCCACTCCAACCCGAGCACATCAAAGCATTTTCCAA +
Preference number: 1 (lower is better)
Translates to: LLMTYKNTECVLPNT*QTSTPTRAHQSIFQ
Trigger: TTGGAAAATGCTTTGATGTGCTCGGGTTGGAGTGGATGTCTGTCAGGTGTTAGGTAGGACGCATTCGGTATTTTTATAGGTCATCAGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR TCA 90 bp GTCCAGGCTGATTCTCATTCAGCTCTGACAAACTGCCTGTTGTCTTaGATGCCAGCTTCTGAAATCCTGAAAGCCAAACCTTGTAAGTTG +
Preference number: 1 (lower is better)
Translates to: VQADSHSALTNCLLS*MPASEILKAKPCKL
Trigger: CAACTTACAAGGTTTGGCTTTCAGGATTTCAGAAGCTGGCATTCAAGACAACAGGCAGTTTGTCAGAGCTGAATGAGAATCAGCCTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR GCA 90 bp ATTTCACAGGCCAGCTCTCAATTTCTCATTCACTCAATACAAAGCTaGTTCAAGATTCCTGAAGCACAAAAGGGCCTCCACTGCTCCACA +
Preference number: 1 (lower is better)
Translates to: ISQASSQFLIHSIQS*FKIPEAQKGLHCST
Trigger: TGTGGAGCAGTGGAGGCCCTTTTGTGCTTCAGGAATCTTGAAGCAGCTTTGTATTGAGTGAATGAGAAATTGAGAGCTGGCCTGTGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR GCA 90 bp CTCTATCTTAAGCTACCTTCTTTTCTAATGGAGAGTTGTGGGCTGTaGAAATACAACCAGACATCAGGAAGCCAGAAGCAGACCAGTCTG +
Preference number: 1 (lower is better)
Translates to: LYLKLPSFLMESCGL*KYNQTSGSQKQTSL
Trigger: CAGACTGGTCTGCTTCTGGCTTCCTGATGTCTGGTTGTATTTGCACAGCCCACAACTCTCCATTAGAAAAGAAGGTAGCTTAAGATAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR TCA 90 bp TCATGTAGCCTGTTTCTAGATTCTGTTCATAAGAGGATGCTTTCCTaGCAAGACCCTGGCTCCATGATGTCTTATCCTGGACAGAAACTA +
Preference number: 1 (lower is better)
Translates to: SCSLFLDSVHKRMLS*QDPGSMMSYPGQKL
Trigger: TAGTTTCTGTCCAGGATAAGACATCATGGAGCCAGGGTCTTGTCAGGAAAGCATCCTCTTATGAACAGAATCTAGAAACAGGCTACATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR TCA 90 bp TTAATCTGGCCTAAGAGCTTCCATCACCTTTGTTGGGTTCTGAAATaGCACAGTAAATCTAAACTCCCCGAAAGATGCCTGGAATGCATG +
Preference number: 1 (lower is better)
Translates to: LIWPKSFHHLCWVLK*HSKSKLPERCLECM
Trigger: CATGCATTCCAGGCATCTTTCGGGGAGTTTAGATTTACTGTGTCATTTCAGAACCCAACAAAGGTGATGGAAGCTCTTAGGCCAGATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR CCA 90 bp ACCATTTGTCAAGACAAACAGAAATGTACAGTGAGTAGGAATCTTTaGTGTCTTGCTTGGACTATGAAACACGAAAGCAAGGCTGGCTCC +
Preference number: 1 (lower is better)
Translates to: TICQDKQKCTVSRNL*CLAWTMKHESKAGS
Trigger: GGAGCCAGCCTTGCTTTCGTGTTTCATAGTCCAAGCAAGACACCAAAGATTCCTACTCACTGTACATTTCTGTTTGTCTTGACAAATGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR TCA 90 bp AGGAAAAACAGAGCAAAGAAAACTGCCAAGGGAGCAACCAGCTTATaGGACTTACATTCTATATATAACATAAGGTGGAAAGGCCCGGCT +
Preference number: 1 (lower is better)
Translates to: RKNRAKKTAKGATSL*DLHSIYNIRWKGPA
Trigger: AGCCGGGCCTTTCCACCTTATGTTATATATAGAATGTAAGTCTCATAAGCTGGTTGCTCCCTTGGCAGTTTTCTTTGCTCTGTTTTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
3UTR TCA 90 bp CCCAAGAAATTCGCAAAGATGGCTCTGCTTATAAAGGGGCCTCAGTaGAATACAATTTTACATTCTTGCATGAGTGTGCGTTTAGTCTGG +
Preference number: 1 (lower is better)
Translates to: PKKFAKMALLIKGPQ*NTILHSCMSVRLVW
Trigger: CCAGACTAAACGCACACTCATGCAAGAATGTAAAATTGTATTTCACTGAGGCCCCTTTATAAGCAGAGCCATCTTTGCGAATTTCTTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR TCA 90 bp GATATCATCACTGCTGCTAGGAAAAACCCAAAGCATGGCTCTGACTaGAACCCGATGAGATATTCTAAAGATATGTTTACATTAACACCC +
Preference number: 1 (lower is better)
Translates to: DIITAARKNPKHGSD*NPMRYSKDMFTLTP
Trigger: GGGTGTTAATGTAAACATATCTTTAGAATATCTCATCGGGTTTCAGTCAGAGCCATGCTTTGGGTTTTTCCTAGCAGCAGTGATGATATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR GCA 90 bp CCAAGGTCCCAAAGTGGGCTGTACAGTTCCTGTTTCTCTACAAAGTaGAGCTTACTAGCAAAAGGGAATAGAATTTTAAATAATGATCAG +
Preference number: 1 (lower is better)
Translates to: PRSQSGLYSSCFSTK*SLLAKGNRILNNDQ
Trigger: CTGATCATTATTTAAAATTCTATTCCCTTTTGCTAGTAAGCTGCACTTTGTAGAGAAACAGGAACTGTACAGCCCACTTTGGGACCTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR TCA 90 bp AGAACCTCTGAAAATCTTTCACTAAAGTCCTGTTTATCCAGTTATTaGGCTGCCAGGATAATCTGTAGTCCCAAAACAAGTAATGGCCTA +
Preference number: 1 (lower is better)
Translates to: RTSENLSLKSCLSSY*AARIICSPKTSNGL
Trigger: TAGGCCATTACTTGTTTTGGGACTACAGATTATCCTGGCAGCTCAATAACTGGATAAACAGGACTTTAGTGAAAGATTTTCAGAGGTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR CCA 90 bp TACAATTTTACATTCTTGCATGAGTGTGCGTTTAGTCTGGTCTACTaGTTCACCCTTCAGGGAGAAATCTCATTAAAATGTATGAGTTGG +
Preference number: 1 (lower is better)
Translates to: YNFTFLHECAFSLVY*FTLQGEISLKCMSW
Trigger: CCAACTCATACATTTTAATGAGATTTCTCCCTGAAGGGTGAACCAGTAGACCAGACTAAACGCACACTCATGCAAGAATGTAAAATTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR-3UTR GCA 90 bp AGCTCAGGGGCTGCGCCAGCGGGCGGTACCCACGGTTTCTCTTCCCCTACATTCGCAGGCACTTGGCTTTaGAGGGCTCCAGGTGACCTG +
Preference number: 2 (lower is better)
Translates to: SSGAAPAGGTHGFSSPTFAGTWL*RAPGDL
Trigger: CAGGTCACCTGGAGCCCTGCAAAGCCAAGTGCCTGC...GAATGTAGGGGAAGAGAAACCGTGGGTACCGCCCGCTGGCGCAGCCCCTGAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR-3UTR CCA 90 bp AGCTCAGGGGCTGCGCCAGCGGGCGGTACCCACGGTTTCTCTTCCCCTACATTCGCTGGAATTCTGACATaGGGCACTTCCAGACATCAC +
Preference number: 2 (lower is better)
Translates to: SSGAAPAGGTHGFSSPTFAGILT*GTSRHH
Trigger: GTGATGTCTGGAAGTGCCCCATGTCAGAATTCCAGC...GAATGTAGGGGAAGAGAAACCGTGGGTACCGCCCGCTGGCGCAGCCCCTGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR CAA 90 bp CTTGGAGCAGGCTGCAAAGCAGCAGAGGGACGCTCATACAGCACGTaGGGGCCTTCTAATGAACCCCATTACTCGGAAGGCAGCATTTCC +
Preference number: 2 (lower is better)
Translates to: LGAGCKAAEGRSYST*GPSNEPHYSEGSIS
Trigger: GGAAATGCTGCCTTCCGAGTAATGGGGTTCATTAGAAGGCCCCAACGTGCTGTATGAGCGTCCCTCTGCTGCTTTGCAGCCTGCTCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR-3UTR GCA 90 bp TTCCTCAGGACTTCCCTGAGAGTGATGAGAAAGGTGCCCCTCTTCCCCAGCCCAAGGGCTCCACAGAGATaGCCACAAAGAACAGAGAGA +
Preference number: 2 (lower is better)
Translates to: FLRTSLRVMRKVPLFPSPRAPQR*PQRTER
Trigger: TCTCTCTGTTCTTTGTGGGCATCTCTGTGGAGCCCT...TGGGCTGGGGAAGAGGGGCACCTTTCTCATCACTCTCAGGGAAGTCCTGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR CAA 90 bp ACAGACCTGGGAATCAGTCCACATGACGGCCACAGCCAAGCTGATTaGGAGACACTGGAAACAACTTTCGACCCTGAGTACCCACTGGCT +
Preference number: 2 (lower is better)
Translates to: TDLGISPHDGHSQAD*ETLETTFDPEYPLA
Trigger: AGCCAGTGGGTACTCAGGGTCGAAAGTTGTTTCCAGTGTCTCCAAATCAGCTTGGCTGTGGCCGTCATGTGGACTGATTCCCAGGTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR-3UTR TCA 90 bp ATGGCTGTGGCTCTAAGTATAATCCTGCCTCTTGGAGCAGGCTGCAAAGCAGCAGAACAGCTGGAATTCTaGCATGGGGCACTTCCAGAC +
Preference number: 2 (lower is better)
Translates to: MAVALSIILPLGAGCKAAEQLEF*HGALPD
Trigger: GTCTGGAAGTGCCCCATGTCAGAATTCCAGCTGTTC...TGCTGCTTTGCAGCCTGCTCCAAGAGGCAGGATTATACTTAGAGCCACAGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR-3UTR TCA 90 bp TTCCTCAGGACTTCCCTGAGAGTGATGAGAAAGGTGCCCCTCTTCCCCAGCCCAGAGGTGGGAAGCATCTaGTTGAAACCCTTAGTCAAA +
Preference number: 2 (lower is better)
Translates to: FLRTSLRVMRKVPLFPSPEVGSI*LKPLVK
Trigger: TTTGACTAAGGGTTTCAATCAGATGCTTCCCACCTC...TGGGCTGGGGAAGAGGGGCACCTTTCTCATCACTCTCAGGGAAGTCCTGAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR-3UTR GCA 90 bp TGTAGGAGCCTGTCACATAGAGAAGTGTCCACACTCTCGGACCATATCTTTAAGCCTCTTGGAGCAGGCTaGAAAGCAGCAGAGGGACGC +
Preference number: 2 (lower is better)
Translates to: CRSLSHREVSTLSDHIFKPLGAG*KAAEGR
Trigger: GCGTCCCTCTGCTGCTTTGCAGCCTGCTCCAAGAGG...CTTAAAGATATGGTCCGAGAGTGTGGACACTTCTCTATGTGACAGGCTCCTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR-3UTR CCA 90 bp TGGCCTCGAAGTTTCGGAAAGTACACACCCTCCTTCAGCTTGGAGTTGGTTAGTACAGCATTGCAGGTGTaGTTCTTCCGCCACTGCCCT +
Preference number: 2 (lower is better)
Translates to: WPRSFGKYTPSFSLELVSTALQV*FFRHCP
Trigger: AGGGCAGTGGCGGAAGAACCACACCTGCAATGCTGT...ACTAACCAACTCCAAGCTGAAGGAGGGTGTGTACTTTCCGAAACTTCGAGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR-3UTR CCA 90 bp TTCCTCAGGACTTCCCTGAGAGTGATGAGAAAGGTGCCCCTCTTCCCCAGCCCATTTAGTCTGGTCTACTaGTTCACCCTTCAGGGAGAA +
Preference number: 2 (lower is better)
Translates to: FLRTSLRVMRKVPLFPSPFSLVY*FTLQGE
Trigger: TTCTCCCTGAAGGGTGAACCAGTAGACCAGACTAAA...TGGGCTGGGGAAGAGGGGCACCTTTCTCATCACTCTCAGGGAAGTCCTGAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR CAA 90 bp AAACCTTCCAATTTCCTTCCAAACAGGCAGGCTCAAGCTCGTTACTaGCTTCGCACCTGCAGAACTGGGCCCAAAATAGAGGGGAGTGGA +
Preference number: 2 (lower is better)
Translates to: KPSNFLPNRQAQARY*LRTCRTGPKIEGSG
Trigger: TCCACTCCCCTCTATTTTGGGCCCAGTTCTGCAGGTGCGAAGCAAGTAACGAGCTTGAGCCTGCCTGTTTGGAAGGAAATTGGAAGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR-3UTR TCA 90 bp GGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTCCTGTGCTGCTGAAACCCCAATATCTGCTTaGCGTGATCTGAGCTGCAAG +
Preference number: 2 (lower is better)
Translates to: GNRTIRTVAGVQSSCAAETPISA*RDLSCK
Trigger: CTTGCAGCTCAGATCACGTCAAGCAGATATTGGGGT...TTCAGCAGCACAGGAAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
3UTR-3UTR TCA 90 bp ATCCACAGGGCAAAAAGGGGCCTTGTTACAGGTGGGCCTTTCATAGACTTGTCCCTGCTTCAAGATTCCTaGAGCACAAAAGGGCCTCCA +
Preference number: 2 (lower is better)
Translates to: IHRAKRGLVTGGPFIDLSLLQDS*STKGPP
Trigger: TGGAGGCCCTTTTGTGCTTCAGGAATCTTGAAGCAG...GGACAAGTCTATGAAAGGCCCACCTGTAACAAGGCCCCTTTTTGCCCTGTGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR-3UTR TCA 90 bp CTAAACTCCCCGAAAGATGCCTGGAATGCATGTCGAAGTCATGCTGACAGGTCCCTGCTGCACCACAGCTaGGCAAACCATTTGTCAAGA +
Preference number: 2 (lower is better)
Translates to: LNSPKDAWNACRSHADRSLLHHS*ANHLSR
Trigger: TCTTGACAAATGGTTTGCTCAGCTGTGGTGCAGCAG...GGACCTGTCAGCATGACTTCGACATGCATTCCAGGCATCTTTCGGGGAGTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR-3UTR TCA 90 bp TGGCCTCGAAGTTTCGGAAAGTACACACCCTCCTTCAGCTTGGAGTTGGTTAGTGCTGTGCTTCCCTCCTaGACACAACCTAGACACACT +
Preference number: 2 (lower is better)
Translates to: WPRSFGKYTPSFSLELVSAVLPS*TQPRHT
Trigger: AGTGTGTCTAGGTTGTGTTCAGGAGGGAAGCACAGC...ACTAACCAACTCCAAGCTGAAGGAGGGTGTGTACTTTCCGAAACTTCGAGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR-3UTR GCA 90 bp ATCCACAGGGCAAAAAGGGGCCTTGTTACAGGTGGGCCTTTCATAGACTTGTCCGGGACAGATGATATGTaGTTTCGTGATGGAGGCAGG +
Preference number: 2 (lower is better)
Translates to: IHRAKRGLVTGGPFIDLSGTDDM*FRDGGR
Trigger: CCTGCCTCCATCACGAAAGCACATATCATCTGTCCC...GGACAAGTCTATGAAAGGCCCACCTGTAACAAGGCCCCTTTTTGCCCTGTGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR-3UTR CCA 90 bp TTGGAGACACTGGAAACAACTTTCGACCCTGAGTACCCACTGGCTGCCCAAATTGTGCTGCTGAACAGCTaGAATTCTGACATGGGGCAC +
Preference number: 2 (lower is better)
Translates to: LETLETTFDPEYPLAAQIVLLNS*NSDMGH
Trigger: GTGCCCCATGTCAGAATTCCAGCTGTTCAGCAGCAC...AATTTGGGCAGCCAGTGGGTACTCAGGGTCGAAAGTTGTTTCCAGTGTCTCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR-3UTR CCA 90 bp TGGCCTCGAAGTTTCGGAAAGTACACACCCTCCTTCAGCTTGGAGTTGGTTAGTACACGAAAGCAAGGCTaGCTCCTAACAGCTCACCCT +
Preference number: 2 (lower is better)
Translates to: WPRSFGKYTPSFSLELVSTRKQG*LLTAHP
Trigger: AGGGTGAGCTGTTAGGAGCCAGCCTTGCTTTCGTGT...ACTAACCAACTCCAAGCTGAAGGAGGGTGTGTACTTTCCGAAACTTCGAGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR-3UTR TCA 90 bp GCCAAAATGCAGGAGGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTACCCCAATATCTGCTTaGCGTGATCTGAGCTGCAAG +
Preference number: 2 (lower is better)
Translates to: AKMQEATGPFAQLQVYNLTPISA*RDLSCK
Trigger: CTTGCAGCTCAGATCACGTCAAGCAGATATTGGGGT...AAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCCTCCTGCATTTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
3UTR-3UTR GCA 90 bp ATGGCTGTGGCTCTAAGTATAATCCTGCCTCTTGGAGCAGGCTGCAAAGCAGCACAGAGCAAAGAAAACTaGCAAGGGAGCAACCAGCTT +
Preference number: 2 (lower is better)
Translates to: MAVALSIILPLGAGCKAAQSKEN*QGSNQL
Trigger: AAGCTGGTTGCTCCCTTGGCAGTTTTCTTTGCTCTG...TGCTGCTTTGCAGCCTGCTCCAAGAGGCAGGATTATACTTAGAGCCACAGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR-3UTR GCA 90 bp GGGACAGATGATATGTGCTTTCGTGATGGAGGCAGGAGGAGCTCCATCTTTACTGAACAGAGGCCAAAATaGAGGAGGCAACAGGACCAT +
Preference number: 2 (lower is better)
Translates to: GTDDMCFRDGGRRSSIFTEQRPK*RRQQDH
Trigger: ATGGTCCTGTTGCCTCCTGCATTTTGGCCTCTGTTC...AGTAAAGATGGAGCTCCTCCTGCCTCCATCACGAAAGCACATATCATCTGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
3UTR-3UTR GCA 90 bp TGGCCTCGAAGTTTCGGAAAGTACACACCCTCCTTCAGCTTGGAGTTGGTTAGTCTCAAGCTCGTTACTTaGTTCGCACCTGCAGAACTG +
Preference number: 2 (lower is better)
Translates to: WPRSFGKYTPSFSLELVSLKLVT*FAPAEL
Trigger: CAGTTCTGCAGGTGCGAAGCAAGTAACGAGCTTGAG...ACTAACCAACTCCAAGCTGAAGGAGGGTGTGTACTTTCCGAAACTTCGAGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR-3UTR GCA 90 bp TCTCAGTTATTTCACCCAGCCACATGGGTTTTCCTGTTCTCTCTACATCCAGCTCAGACCAGTCTGCTGTaGTTCATCCCTTCTGGCTGC +
Preference number: 2 (lower is better)
Translates to: SQLFHPATWVFLFSLHPAQTSLL*FIPSGC
Trigger: GCAGCCAGAAGGGATGAAGCACAGCAGACTGGTCTG...AGCTGGATGTAGAGAGAACAGGAAAACCCATGTGGCTGGGTGAAATAACTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR-3UTR GCA 90 bp CTAAACTCCCCGAAAGATGCCTGGAATGCATGTCGAAGTCATGCTGACAGGTCCGAATCGTGCAGGATTTaGTCTTCTCCCGTGGATAGA +
Preference number: 2 (lower is better)
Translates to: LNSPKDAWNACRSHADRSESCRI*SSPVDR
Trigger: TCTATCCACGGGAGAAGAGCAAATCCTGCACGATTC...GGACCTGTCAGCATGACTTCGACATGCATTCCAGGCATCTTTCGGGGAGTTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR-3UTR CCA 90 bp TGTAGGAGCCTGTCACATAGAGAAGTGTCCACACTCTCGGACCATATCTTTAAGGCCAGCACCCCAGCATaGGAAGTTACATTCTCCTGC +
Preference number: 2 (lower is better)
Translates to: CRSLSHREVSTLSDHIFKASTPA*EVTFSC
Trigger: GCAGGAGAATGTAACTTCCCATGCTGGGGTGCTGGC...CTTAAAGATATGGTCCGAGAGTGTGGACACTTCTCTATGTGACAGGCTCCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR-3UTR TCA 90 bp GCCAAAATGCAGGAGGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTCTGCTTGACGTGATCTaGGCTGCAAGAAGAGTAACT +
Preference number: 2 (lower is better)
Translates to: AKMQEATGPFAQLQVYNLLLDVI*AARRVT
Trigger: AGTTACTCTTCTTGCAGCTCAGATCACGTCAAGCAG...AAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCCTCCTGCATTTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
3UTR-3UTR GCA 90 bp TACAATTTTACATTCTTGCATGAGTGTGCGTTTAGTCTGGTCTACTGGTTCACCCTTCCGCCACTGCCCTaGCTGTGCATGAAAGGCCTG +
Preference number: 2 (lower is better)
Translates to: YNFTFLHECAFSLVYWFTLPPLP*LCMKGL
Trigger: CAGGCCTTTCATGCACAGGCAGGGCAGTGGCGGAAG...GGTGAACCAGTAGACCAGACTAAACGCACACTCATGCAAGAATGTAAAATTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR-3UTR CCA 90 bp TTTAGTCTGGTCTACTGGTTCACCCTTCAGGGAGAAATCTCATTAAAATGTATGCAACCACCAGACCTGTaGCTGCCCTCAGGGCTCCAC +
Preference number: 2 (lower is better)
Translates to: FSLVYWFTLQGEISLKCMQPPDL*LPSGLH
Trigger: GTGGAGCCCTGAGGGCAGCCACAGGTCTGGTGGTTG...CATACATTTTAATGAGATTTCTCCCTGAAGGGTGAACCAGTAGACCAGACTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR-3UTR TCA 90 bp TATAGAACAGAGGCCAAAATGCAGGAGGCAACAGGACCATTCGCACAGTTGCAGAATATCTGCTTGACGTaGTCTGAGCTGCAAGAAGAG +
Preference number: 2 (lower is better)
Translates to: YRTEAKMQEATGPFAQLQNICLT*SELQEE
Trigger: CTCTTCTTGCAGCTCAGATCACGTCAAGCAGATATT...CTGCAACTGTGCGAATGGTCCTGTTGCCTCCTGCATTTTGGCCTCTGTTCTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
3UTR-3UTR TCA 90 bp GAAATTCGCAAAGATGGCTCTGCTTATAAAGGGGCCTCAGTGAAATACAATTTTTCCCAGGCAGATAGCTaGGGCTCTGCCGGCACCATA +
Preference number: 2 (lower is better)
Translates to: EIRKDGSAYKGASVKYNFSQADS*GSAGTI
Trigger: TATGGTGCCGGCAGAGCCTCAGCTATCTGCCTGGGA...AAAATTGTATTTCACTGAGGCCCCTTTATAAGCAGAGCCATCTTTGCGAATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR-3UTR CCA 90 bp TGGCCTCGAAGTTTCGGAAAGTACACACCCTCCTTCAGCTTGGAGTTGGTTAGTTTTCACCCAGCCACATaGGTTTTCCTGTTCTCTCTA +
Preference number: 2 (lower is better)
Translates to: WPRSFGKYTPSFSLELVSFHPAT*VFLFSL
Trigger: TAGAGAGAACAGGAAAACCCATGTGGCTGGGTGAAA...ACTAACCAACTCCAAGCTGAAGGAGGGTGTGTACTTTCCGAAACTTCGAGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR CAA 90 bp CTACTGGTTCACCCTTCAGGGAGAAATCTCATTAAAATGTATGAGTaGGCACCACAGGTGATGCCATTGCCATCTGTCTCAGGAATCCAC +
Preference number: 2 (lower is better)
Translates to: LLVHPSGRNLIKMYE*APQVMPLPSVSGIH
Trigger: GTGGATTCCTGAGACAGATGGCAATGGCATCACCTGTGGTGCCAACTCATACATTTTAATGAGATTTCTCCCTGAAGGGTGAACCAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR-3UTR TCA 90 bp GAGGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTCCTGTGCTGCTGGGAGCAACCAGCTTATaGGACTTACATTCTATATAT +
Preference number: 2 (lower is better)
Translates to: EATGPFAQLQVYNLPVLLGATSL*DLHSIY
Trigger: ATATATAGAATGTAAGTCTCATAAGCTGGTTGCTCC...CAGCAGCACAGGAAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
3UTR-3UTR TCA 90 bp AAAATTATCTGCATTCCAAATTCTCTCCAAGGACATCCGACTTCCCAGGCAGATGAACAGCTGGAATTCTaGCATGGGGCACTTCCAGAC +
Preference number: 2 (lower is better)
Translates to: KIICIPNSLQGHPTSQADEQLEF*HGALPD
Trigger: GTCTGGAAGTGCCCCATGTCAGAATTCCAGCTGTTC...ATCTGCCTGGGAAGTCGGATGTCCTTGGAGAGAATTTGGAATGCAGATAATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
3UTR-3UTR GCA 90 bp TCTCAGTTATTTCACCCAGCCACATGGGTTTTCCTGTTCTCTCTACATCCAGCTGACCATTCGCACAGTTaGAGGTGTACAATCTTCCTG +
Preference number: 2 (lower is better)
Translates to: SQLFHPATWVFLFSLHPADHSHS*RCTIFL
Trigger: CAGGAAGATTGTACACCTGCAACTGTGCGAATGGTC...AGCTGGATGTAGAGAGAACAGGAAAACCCATGTGGCTGGGTGAAATAACTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR-3UTR GCA 90 bp TCTCAGTTATTTCACCCAGCCACATGGGTTTTCCTGTTCTCTCTACATCCAGCTGAAGTTACATTCTCCTaGCTGTCACTGCACACACCA +
Preference number: 2 (lower is better)
Translates to: SQLFHPATWVFLFSLHPAEVTFS*LSLHTP
Trigger: TGGTGTGTGCAGTGACAGGCAGGAGAATGTAACTTC...AGCTGGATGTAGAGAGAACAGGAAAACCCATGTGGCTGGGTGAAATAACTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR-3UTR CCA 90 bp TATAGAACAGAGGCCAAAATGCAGGAGGCAACAGGACCATTCGCACAGTTGCAGATATATAACATAAGGTaGAAAGGCCCGGCTAGAGAG +
Preference number: 2 (lower is better)
Translates to: YRTEAKMQEATGPFAQLQIYNIR*KGPARE
Trigger: CTCTCTAGCCGGGCCTTTCCACCTTATGTTATATAT...CTGCAACTGTGCGAATGGTCCTGTTGCCTCCTGCATTTTGGCCTCTGTTCTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
3UTR-3UTR CCA 90 bp GCCAAAATGCAGGAGGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTATATATAACATAAGGTaGAAAGGCCCGGCTAGAGAG +
Preference number: 2 (lower is better)
Translates to: AKMQEATGPFAQLQVYNLIYNIR*KGPARE
Trigger: CTCTCTAGCCGGGCCTTTCCACCTTATGTTATATAT...AAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCCTCCTGCATTTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
3UTR CAA 90 bp AGAAATCTCATTAAAATGTATGAGTTGGCACCACAGGTGATGCCATaGCCATCTGTCTCAGGAATCCACACACCTGTAGGCTGGGTGTAT +
Preference number: 2 (lower is better)
Translates to: RNLIKMYELAPQVMP*PSVSGIHTPVGWVY
Trigger: ATACACCCAGCCTACAGGTGTGTGGATTCCTGAGACAGATGGCAATGGCATCACCTGTGGTGCCAACTCATACATTTTAATGAGATTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR-3UTR TCA 90 bp TCTCAGTTATTTCACCCAGCCACATGGGTTTTCCTGTTCTCTCTACATCCAGCTAATATCTGCTTGACGTaGTCTGAGCTGCAAGAAGAG +
Preference number: 2 (lower is better)
Translates to: SQLFHPATWVFLFSLHPANICLT*SELQEE
Trigger: CTCTTCTTGCAGCTCAGATCACGTCAAGCAGATATT...AGCTGGATGTAGAGAGAACAGGAAAACCCATGTGGCTGGGTGAAATAACTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR-3UTR GCA 90 bp CTTTACTCTTCCTTTATAGAACAGAGGCCAAAATGCAGGAGGCAACAGGACCATCAGAGCAAAGAAAACTaGCAAGGGAGCAACCAGCTT +
Preference number: 2 (lower is better)
Translates to: LYSSFIEQRPKCRRQQDHQSKEN*QGSNQL
Trigger: AAGCTGGTTGCTCCCTTGGCAGTTTTCTTTGCTCTG...ATGGTCCTGTTGCCTCCTGCATTTTGGCCTCTGTTCTATAAAGGAAGAGTAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
3UTR-3UTR CCA 90 bp AAAATTATCTGCATTCCAAATTCTCTCCAAGGACATCCGACTTCCCAGGCAGATGCTGGAATTCTGACATaGGGCACTTCCAGACATCAC +
Preference number: 2 (lower is better)
Translates to: KIICIPNSLQGHPTSQADAGILT*GTSRHH
Trigger: GTGATGTCTGGAAGTGCCCCATGTCAGAATTCCAGC...ATCTGCCTGGGAAGTCGGATGTCCTTGGAGAGAATTTGGAATGCAGATAATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
3UTR-3UTR CCA 90 bp TCTCAGTTATTTCACCCAGCCACATGGGTTTTCCTGTTCTCTCTACATCCAGCTTCTGTTTTCCCCTCTTaGTGGTGGTTTAACATGGCT +
Preference number: 2 (lower is better)
Translates to: SQLFHPATWVFLFSLHPASVFPS*WWFNMA
Trigger: AGCCATGTTAAACCACCACCAAGAGGGGAAAACAGA...AGCTGGATGTAGAGAGAACAGGAAAACCCATGTGGCTGGGTGAAATAACTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR-3UTR CCA 90 bp TGTAGGAGCCTGTCACATAGAGAAGTGTCCACACTCTCGGACCATATCTTTAAGAAAGTTAGCTGGGTGTaGTGGCACGTTCCTATATTC +
Preference number: 2 (lower is better)
Translates to: CRSLSHREVSTLSDHIFKKVSWV*WHVPIF
Trigger: GAATATAGGAACGTGCCACCACACCCAGCTAACTTT...CTTAAAGATATGGTCCGAGAGTGTGGACACTTCTCTATGTGACAGGCTCCTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR CAA 90 bp TTTGCTCTTCTCCCGTGGATAGACTCAGTTCTCTGCTGTTTTTCTTaGGCATGTCCACGTCACTCCCTAAATAACCCACTCTCAGTTATT +
Preference number: 2 (lower is better)
Translates to: FALLPWIDSVLCCFS*ACPRHSLNNPLSVI
Trigger: AATAACTGAGAGTGGGTTATTTAGGGAGTGACGTGGACATGCCAAAGAAAAACAGCAGAGAACTGAGTCTATCCACGGGAGAAGAGCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR-3UTR TCA 90 bp TATAGAACAGAGGCCAAAATGCAGGAGGCAACAGGACCATTCGCACAGTTGCAGGGAGCAACCAGCTTATaGGACTTACATTCTATATAT +
Preference number: 2 (lower is better)
Translates to: YRTEAKMQEATGPFAQLQGATSL*DLHSIY
Trigger: ATATATAGAATGTAAGTCTCATAAGCTGGTTGCTCC...CTGCAACTGTGCGAATGGTCCTGTTGCCTCCTGCATTTTGGCCTCTGTTCTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
3UTR-3UTR TCA 90 bp TACAATTTTACATTCTTGCATGAGTGTGCGTTTAGTCTGGTCTACTGGTTCACCTTGCAGGGCTCCAGGTaGCCTGTTTGCATTTACATC +
Preference number: 2 (lower is better)
Translates to: YNFTFLHECAFSLVYWFTLQGSR*PVCIYI
Trigger: GATGTAAATGCAAACAGGTCACCTGGAGCCCTGCAA...GGTGAACCAGTAGACCAGACTAAACGCACACTCATGCAAGAATGTAAAATTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR-3UTR GCA 90 bp GAAATTCGCAAAGATGGCTCTGCTTATAAAGGGGCCTCAGTGAAATACAATTTTAAGGCAGCATTTCCATaGAGAGTGAGTCGCCAGCAG +
Preference number: 2 (lower is better)
Translates to: EIRKDGSAYKGASVKYNFKAAFP*RVSRQQ
Trigger: CTGCTGGCGACTCACTCTGCATGGAAATGCTGCCTT...AAAATTGTATTTCACTGAGGCCCCTTTATAAGCAGAGCCATCTTTGCGAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR-3UTR TCA 90 bp GAAATTCGCAAAGATGGCTCTGCTTATAAAGGGGCCTCAGTGAAATACAATTTTAAGAGGTCAAAGAACTaGAGGCTTCCACCCACCTTC +
Preference number: 2 (lower is better)
Translates to: EIRKDGSAYKGASVKYNFKRSKN*RLPPTF
Trigger: GAAGGTGGGTGGAAGCCTTCAGTTCTTTGACCTCTT...AAAATTGTATTTCACTGAGGCCCCTTTATAAGCAGAGCCATCTTTGCGAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR-3UTR GCA 90 bp TACAATTTTACATTCTTGCATGAGTGTGCGTTTAGTCTGGTCTACTGGTTCACCTCAGCTACAAGAGACTaGTGTTTCCAGGAAGAGCTC +
Preference number: 2 (lower is better)
Translates to: YNFTFLHECAFSLVYWFTSATRD*CFQEEL
Trigger: GAGCTCTTCCTGGAAACAGCAGTCTCTTGTAGCTGA...GGTGAACCAGTAGACCAGACTAAACGCACACTCATGCAAGAATGTAAAATTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR-3UTR CCA 90 bp TTTAGTCTGGTCTACTGGTTCACCCTTCAGGGAGAAATCTCATTAAAATGTATGTATAATCCTGCCTCTTaGAGCAGGCTGCAAAGCAGC +
Preference number: 2 (lower is better)
Translates to: FSLVYWFTLQGEISLKCMYNPAS*SRLQSS
Trigger: GCTGCTTTGCAGCCTGCTCCAAGAGGCAGGATTATA...CATACATTTTAATGAGATTTCTCCCTGAAGGGTGAACCAGTAGACCAGACTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR-3UTR GCA 90 bp TCTCTAACTGGCTATTCCAGCACTCCCATTTCATGGTTGGGAAATTGTATTTTATACTTGCTTCGCACCTaGAGAACTGGGCCCAAAATA +
Preference number: 2 (lower is better)
Translates to: SLTGYSSTPISWLGNCILYLLRT*RTGPKI
Trigger: TATTTTGGGCCCAGTTCTGCAGGTGCGAAGCAAGTA...TAAAATACAATTTCCCAACCATGAAATGGGAGTGCTGGAATAGCCAGTTAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR-3UTR GCA 90 bp TTTAGTCTGGTCTACTGGTTCACCCTTCAGGGAGAAATCTCATTAAAATGTATGAAACTCCCCGAAAGATaGCTGGAATGCATGTCGAAG +
Preference number: 2 (lower is better)
Translates to: FSLVYWFTLQGEISLKCMKLPER*LECMSK
Trigger: CTTCGACATGCATTCCAGGCATCTTTCGGGGAGTTT...CATACATTTTAATGAGATTTCTCCCTGAAGGGTGAACCAGTAGACCAGACTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR-3UTR CCA 90 bp TCTCTAACTGGCTATTCCAGCACTCCCATTTCATGGTTGGGAAATTGTATTTTATCCAAGGTCCCAAAGTaGGCTGTACAGTTCCTGTTT +
Preference number: 2 (lower is better)
Translates to: SLTGYSSTPISWLGNCILSKVPK*AVQFLF
Trigger: AAACAGGAACTGTACAGCCCACTTTGGGACCTTGGA...TAAAATACAATTTCCCAACCATGAAATGGGAGTGCTGGAATAGCCAGTTAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR-3UTR CCA 90 bp TTTAGTCTGGTCTACTGGTTCACCCTTCAGGGAGAAATCTCATTAAAATGTATGAGAAGTCACTCAGTCTaGAACTTTAAGTCGGGCCCT +
Preference number: 2 (lower is better)
Translates to: FSLVYWFTLQGEISLKCMRSHSV*NFKSGP
Trigger: AGGGCCCGACTTAAAGTTCCAGACTGAGTGACTTCT...CATACATTTTAATGAGATTTCTCCCTGAAGGGTGAACCAGTAGACCAGACTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR-3UTR CCA 90 bp CTAAATAACCCACTCTCAGTTATTTCACCCAGCCACATGGGTTTTCCTGTTCTCTTCCATTTACAGATGTaGCGTTGGCATTTTATGACT +
Preference number: 2 (lower is better)
Translates to: LNNPLSVISPSHMGFPVLFHLQM*RWHFMT
Trigger: AGTCATAAAATGCCAACGCCACATCTGTAAATGGAA...GAGAACAGGAAAACCCATGTGGCTGGGTGAAATAACTGAGAGTGGGTTATTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR-3UTR TCA 90 bp TACAATTTTACATTCTTGCATGAGTGTGCGTTTAGTCTGGTCTACTGGTTCACCAACAGAAATGTACAGTaGGTAGGAATCTTTGGTGTC +
Preference number: 2 (lower is better)
Translates to: YNFTFLHECAFSLVYWFTNRNVQ*VGIFGV
Trigger: GACACCAAAGATTCCTACTCACTGTACATTTCTGTT...GGTGAACCAGTAGACCAGACTAAACGCACACTCATGCAAGAATGTAAAATTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR-3UTR TCA 90 bp TTTAGTCTGGTCTACTGGTTCACCCTTCAGGGAGAAATCTCATTAAAATGTATGCACAGCTTATGGCCATaGCCCGCTATTTTATATTGT +
Preference number: 2 (lower is better)
Translates to: FSLVYWFTLQGEISLKCMHSLWP*PAILYC
Trigger: ACAATATAAAATAGCGGGTCATGGCCATAAGCTGTG...CATACATTTTAATGAGATTTCTCCCTGAAGGGTGAACCAGTAGACCAGACTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR-3UTR GCA 90 bp GAAATTCGCAAAGATGGCTCTGCTTATAAAGGGGCCTCAGTGAAATACAATTTTGGGGAAAGAGTCAACTaGATTCTCTTACAGTGTTTC +
Preference number: 2 (lower is better)
Translates to: EIRKDGSAYKGASVKYNFGERVN*ILLQCF
Trigger: GAAACACTGTAAGAGAATGCAGTTGACTCTTTCCCC...AAAATTGTATTTCACTGAGGCCCCTTTATAAGCAGAGCCATCTTTGCGAATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR-3UTR CCA 90 bp TTTAGTCTGGTCTACTGGTTCACCCTTCAGGGAGAAATCTCATTAAAATGTATGCTTTGGTGTCTTGCTTaGACTATGAAACACGAAAGC +
Preference number: 2 (lower is better)
Translates to: FSLVYWFTLQGEISLKCMLWCLA*TMKHES
Trigger: GCTTTCGTGTTTCATAGTCCAAGCAAGACACCAAAG...CATACATTTTAATGAGATTTCTCCCTGAAGGGTGAACCAGTAGACCAGACTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR-3UTR CCA 90 bp TTTAGTCTGGTCTACTGGTTCACCCTTCAGGGAGAAATCTCATTAAAATGTATGGTGAGTAGGAATCTTTaGTGTCTTGCTTGGACTATG +
Preference number: 2 (lower is better)
Translates to: FSLVYWFTLQGEISLKCMVSRNL*CLAWTM
Trigger: CATAGTCCAAGCAAGACACCAAAGATTCCTACTCAC...CATACATTTTAATGAGATTTCTCCCTGAAGGGTGAACCAGTAGACCAGACTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR-3UTR CCA 90 bp TTTAGTCTGGTCTACTGGTTCACCCTTCAGGGAGAAATCTCATTAAAATGTATGTCTAATGGAGAGTTGTaGGCTGTGCAAATACAACCA +
Preference number: 2 (lower is better)
Translates to: FSLVYWFTLQGEISLKCMSNGEL*AVQIQP
Trigger: TGGTTGTATTTGCACAGCCCACAACTCTCCATTAGA...CATACATTTTAATGAGATTTCTCCCTGAAGGGTGAACCAGTAGACCAGACTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR-3UTR CCA 90 bp TACAATTTTACATTCTTGCATGAGTGTGCGTTTAGTCTGGTCTACTGGTTCACCAGCACTCCCATTTCATaGTTGGGAAATTGTATTTTA +
Preference number: 2 (lower is better)
Translates to: YNFTFLHECAFSLVYWFTSTPIS*LGNCIL
Trigger: TAAAATACAATTTCCCAACCATGAAATGGGAGTGCT...GGTGAACCAGTAGACCAGACTAAACGCACACTCATGCAAGAATGTAAAATTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR GCA 72 bp CTGAAGCACAAAAGGGCCTCCACTGCTCCACAGCATTaGAGGTGTGGTTCTTCCGCCACTGCCCTGCCTGTG +
Preference number: 3 (lower is better)
Translates to: LKHKRASTAPQH*RCGSSATALPV
Trigger: CACAGGCAGGGCAGTGGCGGAAGAACCACACCTGCAATGCTGTGGAGCAGTGGAGGCCCTTTTGTGCTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR TCA 72 bp TCTCTCCAAGGACATCCGACTTCCCAGGCAGATAGCTaGGGCTCTGCCGGCACCATAAGGCAACACACGCTG +
Preference number: 3 (lower is better)
Translates to: SLQGHPTSQADS*GSAGTIRQHTL
Trigger: CAGCGTGTGTTGCCTTATGGTGCCGGCAGAGCCTCAGCTATCTGCCTGGGAAGTCGGATGTCCTTGGAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
3UTR TCA 72 bp ACCCCATTACTCGGAAGGCAGCATTTCCATGCAGAGTaGGTCGCCAGCAGGCACTTGGCTTTGCAGGGCTCC +
Preference number: 3 (lower is better)
Translates to: TPLLGRQHFHAE*VASRHLALQGS
Trigger: GGAGCCCTGCAAAGCCAAGTGCCTGCTGGCGACTCACTCTGCATGGAAATGCTGCCTTCCGAGTAATGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR TCA 72 bp TCTCATGATAATCGTGGTGTGCTGCAGGCATCACGATaGAGGCGGGGCTGTCTGCACTCCTGTGCTTGCGAC +
Preference number: 3 (lower is better)
Translates to: SHDNRGVLQASR*RRGCLHSCACD
Trigger: GTCGCAAGCACAGGAGTGCAGACAGCCCCGCCTTCATCGTGATGCCTGCAGCACACCACGATTATCATGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR GCA 72 bp GCTGCCAGCACCCCAGCATGGGAAGTTACATTCTCCTaGCTGTCACTGCACACACCAGTCATCTCTGTCCTC +
Preference number: 3 (lower is better)
Translates to: AASTPAWEVTFS*LSLHTPVISVL
Trigger: GAGGACAGAGATGACTGGTGTGTGCAGTGACAGGCAGGAGAATGTAACTTCCCATGCTGGGGTGCTGGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR TCA 72 bp GTCGCCAGCAGGCACTTGGCTTTGCAGGGCTCCAGGTaGCCTGTTTGCATTTACATCCAAGGTCCCAAAGTG +
Preference number: 3 (lower is better)
Translates to: VASRHLALQGSR*PVCIYIQGPKV
Trigger: CACTTTGGGACCTTGGATGTAAATGCAAACAGGTCACCTGGAGCCCTGCAAAGCCAAGTGCCTGCTGGCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR GCA 72 bp TCCATGCAGAGTGAGTCGCCAGCAGGCACTTGGCTTTaGAGGGCTCCAGGTGACCTGTTTGCATTTACATCC +
Preference number: 3 (lower is better)
Translates to: SMQSESPAGTWL*RAPGDLFAFTS
Trigger: GGATGTAAATGCAAACAGGTCACCTGGAGCCCTGCAAAGCCAAGTGCCTGCTGGCGACTCACTCTGCATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR GCA 72 bp GCTGTTTCCAGGAAGAGCTCACACTGCAAAGCAGGCTaGCGTTTGCAGCAAACCACACATGACACCAGCCTG +
Preference number: 3 (lower is better)
Translates to: AVSRKSSHCKAG*RLQQTTHDTSL
Trigger: CAGGCTGGTGTCATGTGTGGTTTGCTGCAAACGGCAGCCTGCTTTGCAGTGTGAGCTCTTCCTGGAAACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR GCA 72 bp GTGTGCTGCAGGCATCACGATGAAGGCGGGGCTGTCTaGACTCCTGTGCTTGCGACACTAATACTGTTCTCT +
Preference number: 3 (lower is better)
Translates to: VCCRHHDEGGAV*TPVLATLILFS
Trigger: AGAGAACAGTATTAGTGTCGCAAGCACAGGAGTGCAGACAGCCCCGCCTTCATCGTGATGCCTGCAGCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR CCA 72 bp GCTGCAAAGCAGCAGAGGGACGCTCATACAGCACGTTaGGGCCTTCTAATGAACCCCATTACTCGGAAGGCA +
Preference number: 3 (lower is better)
Translates to: AAKQQRDAHTAR*GLLMNPITRKA
Trigger: TGCCTTCCGAGTAATGGGGTTCATTAGAAGGCCCCAACGTGCTGTATGAGCGTCCCTCTGCTGCTTTGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR CCA 72 bp AGCAGCCCATCCACAACCCTAAACCTCAAACAGACCTaGGAATCAGTCCACATGACGGCCACAGCCAAGCTG +
Preference number: 3 (lower is better)
Translates to: SSPSTTLNLKQT*ESVHMTATAKL
Trigger: CAGCTTGGCTGTGGCCGTCATGTGGACTGATTCCCAGGTCTGTTTGAGGTTTAGGGTTGTGGATGGGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR GCA 72 bp GTGGCTCTAAGTATAATCCTGCCTCTTGGAGCAGGCTaGAAAGCAGCAGAGGGACGCTCATACAGCACGTTG +
Preference number: 3 (lower is better)
Translates to: VALSIILPLGAG*KAAEGRSYSTL
Trigger: CAACGTGCTGTATGAGCGTCCCTCTGCTGCTTTGCAGCCTGCTCCAAGAGGCAGGATTATACTTAGAGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR GCA 72 bp TTTAAGAGACTATGTGACCTTACCCGGGAAGCCAGGTaGCCCGCATCCTGTTGCGGTCCTGAAAACTACTGG +
Preference number: 3 (lower is better)
Translates to: FKRLCDLTREAR*PASCCGPENYW
Trigger: CCAGTAGTTTTCAGGACCGCAACAGGATGCGGGGCACCTGGCTTCCCGGGTAAGGTCACATAGTCTCTTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR GCA 72 bp AAGTGGACACCCCTCCATCACCAATTCAGCGACTCATaGTTCCTGGCTTGCACAGTTCCTCAGGACTTCCCT +
Preference number: 3 (lower is better)
Translates to: KWTPLHHQFSDS*FLACTVPQDFP
Trigger: AGGGAAGTCCTGAGGAACTGTGCAAGCCAGGAAGCATGAGTCGCTGAATTGGTGATGGAGGGGTGTCCACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR CCA 72 bp AGCATTTCCATGCAGAGTGAGTCGCCAGCAGGCACTTaGCTTTGCAGGGCTCCAGGTGACCTGTTTGCATTT +
Preference number: 3 (lower is better)
Translates to: SISMQSESPAGT*LCRAPGDLFAF
Trigger: AAATGCAAACAGGTCACCTGGAGCCCTGCAAAGCCAAGTGCCTGCTGGCGACTCACTCTGCATGGAAATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR CCA 72 bp CACATGACGGCCACAGCCAAGCTGATTTGGAGACACTaGAAACAACTTTCGACCCTGAGTACCCACTGGCTG +
Preference number: 3 (lower is better)
Translates to: HMTATAKLIWRH*KQLSTLSTHWL
Trigger: CAGCCAGTGGGTACTCAGGGTCGAAAGTTGTTTCCAGTGTCTCCAAATCAGCTTGGCTGTGGCCGTCATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR GCA 72 bp CTAATGAACCCCATTACTCGGAAGGCAGCATTTCCATaGAGAGTGAGTCGCCAGCAGGCACTTGGCTTTGCA +
Preference number: 3 (lower is better)
Translates to: LMNPITRKAAFP*RVSRQQALGFA
Trigger: TGCAAAGCCAAGTGCCTGCTGGCGACTCACTCTGCATGGAAATGCTGCCTTCCGAGTAATGGGGTTCATTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR GCA 72 bp AACAGGCAGGCTCAAGCTCGTTACTTGCTTCGCACCTaGAGAACTGGGCCCAAAATAGAGGGGAGTGGAATT +
Preference number: 3 (lower is better)
Translates to: NRQAQARYLLRT*RTGPKIEGSGI
Trigger: AATTCCACTCCCCTCTATTTTGGGCCCAGTTCTGCAGGTGCGAAGCAAGTAACGAGCTTGAGCCTGCCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR CCA 72 bp GTGTTATCGTGTGAGTTTGCTGCCAGCACCCCAGCATaGGAAGTTACATTCTCCTGCCTGTCACTGCACACA +
Preference number: 3 (lower is better)
Translates to: VLSCEFAASTPA*EVTFSCLSLHT
Trigger: TGTGTGCAGTGACAGGCAGGAGAATGTAACTTCCCATGCTGGGGTGCTGGCAGCAAACTCACACGATAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR CCA 72 bp CTTCCCCTACATTCTTCCAGCAAGGAGCACAGCGACTaGTGTAGGAGCCTGTCACATAGAGAAGTGTCCACA +
Preference number: 3 (lower is better)
Translates to: LPLHSSSKEHSD*CRSLSHREVST
Trigger: TGTGGACACTTCTCTATGTGACAGGCTCCTACACCAGTCGCTGTGCTCCTTGCTGGAAGAATGTAGGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR-3UTR CAA 90 bp CTAAACTCCCCGAAAGATGCCTGGAATGCATGTCGAAGTCATGCTGACAGGTCCAAAGCAGGCTGCCGTTaGCAGCAAACCACACATGAC +
Preference number: 3 (lower is better)
Translates to: LNSPKDAWNACRSHADRSKAGCR*QQTTHD
Trigger: GTCATGTGTGGTTTGCTGCAAACGGCAGCCTGCTTT...GGACCTGTCAGCATGACTTCGACATGCATTCCAGGCATCTTTCGGGGAGTTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR GCA 72 bp CTACAAGAGACTGCTGTTTCCAGGAAGAGCTCACACTaGAAAGCAGGCTGCCGTTTGCAGCAAACCACACAT +
Preference number: 3 (lower is better)
Translates to: LQETAVSRKSSH*KAGCRLQQTTH
Trigger: ATGTGTGGTTTGCTGCAAACGGCAGCCTGCTTTGCAGTGTGAGCTCTTCCTGGAAACAGCAGTCTCTTGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR-3UTR CAA 90 bp AGACAAACCTTCCAATTTCCTTCCAAACAGGCAGGCTCAAGCTCGTTACTTGCTCGCTCATACAGCACGTaGGGGCCTTCTAATGAACCC +
Preference number: 3 (lower is better)
Translates to: RQTFQFPSKQAGSSSLLARSYST*GPSNEP
Trigger: GGGTTCATTAGAAGGCCCCAACGTGCTGTATGAGCG...AGCAAGTAACGAGCTTGAGCCTGCCTGTTTGGAAGGAAATTGGAAGGTTTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR TCA 72 bp TTGCAGCAAACCACACATGACACCAGCCTGAGCCAGTaGCTTGAAGTAGCACGTGCAATAATAGCTGACCTG +
Preference number: 3 (lower is better)
Translates to: LQQTTHDTSLSQ*LEVARAIIADL
Trigger: CAGGTCAGCTATTATTGCACGTGCTACTTCAAGTCACTGGCTCAGGCTGGTGTCATGTGTGGTTTGCTGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR CCA 72 bp TTGCAGGTGTACAATCTTCCTGTGCTGCTGAACAGCTaGAATTCTGACATGGGGCACTTCCAGACATCACCA +
Preference number: 3 (lower is better)
Translates to: LQVYNLPVLLNS*NSDMGHFQTSP
Trigger: TGGTGATGTCTGGAAGTGCCCCATGTCAGAATTCCAGCTGTTCAGCAGCACAGGAAGATTGTACACCTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
3UTR CCA 72 bp GGCTCAAGCTCGTTACTTGCTTCGCACCTGCAGAACTaGGCCCAAAATAGAGGGGAGTGGAATTTAATATCC +
Preference number: 3 (lower is better)
Translates to: GSSSLLASHLQN*AQNRGEWNLIS
Trigger: GGATATTAAATTCCACTCCCCTCTATTTTGGGCCCAGTTCTGCAGGTGCGAAGCAAGTAACGAGCTTGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR-3UTR CAA 90 bp AAGGGACAGATGATATGTGCTTTCGTGATGGAGGCAGGAGGAGCTCCATCTTTAGGACCATTCGCACAGTaGCAGGTGTACAATCTTCCT +
Preference number: 3 (lower is better)
Translates to: KGQMICAFVMEAGGAPSLGPFAQ*QVYNLP
Trigger: AGGAAGATTGTACACCTGCAACTGTGCGAATGGTCC...TAAAGATGGAGCTCCTCCTGCCTCCATCACGAAAGCACATATCATCTGTCCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
3UTR-3UTR CAA 90 bp AAACAGACCTGGGAATCAGTCCACATGACGGCCACAGCCAAGCTGATTTGGAGATCTTTGGTGTCTTGCTaGGACTATGAAACACGAAAG +
Preference number: 3 (lower is better)
Translates to: KQTWESVHMTATAKLIWRSLVSC*DYETRK
Trigger: CTTTCGTGTTTCATAGTCCAAGCAAGACACCAAAGA...TCTCCAAATCAGCTTGGCTGTGGCCGTCATGTGGACTGATTCCCAGGTCTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR TCA 72 bp GCACTTGATTTGTCCAGGCTGATTCTCATTCAGCTCTaGCAAACTGCCTGTTGTCTTGAATGCCAGCTTCTG +
Preference number: 3 (lower is better)
Translates to: ALDLSRLILIQL*QTACCLECQLL
Trigger: CAGAAGCTGGCATTCAAGACAACAGGCAGTTTGTCAGAGCTGAATGAGAATCAGCCTGGACAAATCAAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR GCA 72 bp CATCTTTACTCTTCCTTTATAGAACAGAGGCCAAAATaGAGGAGGCAACAGGACCATTCGCACAGTTGCAGG +
Preference number: 3 (lower is better)
Translates to: HLYSSFIEQRPK*RRQQDHSHSCR
Trigger: CCTGCAACTGTGCGAATGGTCCTGTTGCCTCCTGCATTTTGGCCTCTGTTCTATAAAGGAAGAGTAAAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
3UTR GCA 72 bp GTCCTGGAAGTAAAATCCAAAGGGACAGATGATATGTaGTTTCGTGATGGAGGCAGGAGGAGCTCCATCTTT +
Preference number: 3 (lower is better)
Translates to: VLEVKSKGTDDM*FRDGGRRSSIF
Trigger: AAAGATGGAGCTCCTCCTGCCTCCATCACGAAAGCACATATCATCTGTCCCTTTGGATTTTACTTCCAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
3UTR CCA 72 bp GGTGACCTGTTTGCATTTACATCCAAGGTCCCAAAGTaGGCTGTACAGTTCCTGTTTCTCTACAAAGTGCAG +
Preference number: 3 (lower is better)
Translates to: GDLFAFTSKVPK*AVQFLFLYKVQ
Trigger: CTGCACTTTGTAGAGAAACAGGAACTGTACAGCCCACTTTGGGACCTTGGATGTAAATGCAAACAGGTCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR CCA 72 bp AGACACTGGAAACAACTTTCGACCCTGAGTACCCACTaGCTGCCCAAATTAAACAGGCAACCCCAATATTCA +
Preference number: 3 (lower is better)
Translates to: RHWKQLSTLSTH*LPKLNRQPQYS
Trigger: TGAATATTGGGGTTGCCTGTTTAATTTGGGCAGCCAGTGGGTACTCAGGGTCGAAAGTTGTTTCCAGTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR TCA 72 bp CACTCAGTCTGGAACTTTAAGTCGGGCCCTGAATTATaGATTGAGGTTAATGTTGTGATACTCCAGGAACCC +
Preference number: 3 (lower is better)
Translates to: HSVWNFKSGPEL*IEVNVVILQEP
Trigger: GGGTTCCTGGAGTATCACAACATTAACCTCAATTCATAATTCAGGGCCCGACTTAAAGTTCCAGACTGAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR TCA 72 bp CCTAAGAGCTTCCATCACCTTTGTTGGGTTCTGAAATaGCACAGTAAATCTAAACTCCCCGAAAGATGCCTG +
Preference number: 3 (lower is better)
Translates to: PKSFHHLCWVLK*HSKSKLPERCL
Trigger: CAGGCATCTTTCGGGGAGTTTAGATTTACTGTGTCATTTCAGAACCCAACAAAGGTGATGGAAGCTCTTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR TCA 72 bp GATTCTCATTCAGCTCTGACAAACTGCCTGTTGTCTTaGATGCCAGCTTCTGAAATCCTGAAAGCCAAACCT +
Preference number: 3 (lower is better)
Translates to: DSHSALTNCLLS*MPASEILKAKP
Trigger: AGGTTTGGCTTTCAGGATTTCAGAAGCTGGCATTCAAGACAACAGGCAGTTTGTCAGAGCTGAATGAGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR CCA 72 bp GGCCTAGAATATCTTCCTAATGACTTAAAGCTGATGTaGCATCAGCTACAAGAGACTGCTGTTTCCAGGAAG +
Preference number: 3 (lower is better)
Translates to: GLEYLPNDLKLM*HQLQETAVSRK
Trigger: CTTCCTGGAAACAGCAGTCTCTTGTAGCTGATGCCACATCAGCTTTAAGTCATTAGGAAGATATTCTAGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR-3UTR CAA 90 bp TTTAGTCTGGTCTACTGGTTCACCCTTCAGGGAGAAATCTCATTAAAATGTATGGGACCATTCGCACAGTaGCAGGTGTACAATCTTCCT +
Preference number: 3 (lower is better)
Translates to: FSLVYWFTLQGEISLKCMGPFAQ*QVYNLP
Trigger: AGGAAGATTGTACACCTGCAACTGTGCGAATGGTCC...CATACATTTTAATGAGATTTCTCCCTGAAGGGTGAACCAGTAGACCAGACTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR-3UTR CAA 90 bp TTTAGTCTGGTCTACTGGTTCACCCTTCAGGGAGAAATCTCATTAAAATGTATGCTAGAAAGGAGCTGTTaGATCTCTGTCCAGGGTCAC +
Preference number: 3 (lower is better)
Translates to: FSLVYWFTLQGEISLKCMLERSC*ISVQGH
Trigger: GTGACCCTGGACAGAGATCAAACAGCTCCTTTCTAG...CATACATTTTAATGAGATTTCTCCCTGAAGGGTGAACCAGTAGACCAGACTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR TCA 72 bp CATGGATTATTTGCAAATAGAGCTGACCCTTGCTTGTaGGGTGGGAAGCATCTGATTGAAACCCTTAGTCAA +
Preference number: 3 (lower is better)
Translates to: HGLFANRADPCL*GGKHLIETLSQ
Trigger: TTGACTAAGGGTTTCAATCAGATGCTTCCCACCTCACAAGCAAGGGTCAGCTCTATTTGCAAATAATCCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR CCA 72 bp TCAGCTCACAATTATTCTGTTTTCCCCTCTTGGTGGTaGTTTAACATGGCTGTGGCTCTAAGTATAATCCTG +
Preference number: 3 (lower is better)
Translates to: SAHNYSVFPSWW*FNMAVALSIIL
Trigger: CAGGATTATACTTAGAGCCACAGCCATGTTAAACCACCACCAAGAGGGGAAAACAGAATAATTGTGAGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR TCA 72 bp TTCGCAAAGATGGCTCTGCTTATAAAGGGGCCTCAGTaGAATACAATTTTACATTCTTGCATGAGTGTGCGT +
Preference number: 3 (lower is better)
Translates to: FAKMALLIKGPQ*NTILHSCMSVR
Trigger: ACGCACACTCATGCAAGAATGTAAAATTGTATTTCACTGAGGCCCCTTTATAAGCAGAGCCATCTTTGCGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR TCA 72 bp GAGAATAAAATCCTTGGAGGCCTTGATTTGAAGCTGTaGACCTGTAGCCTACCAAGGACAGTAAAAACATTC +
Preference number: 3 (lower is better)
Translates to: ENKILGGLDLKL*TCSLPRTVKTF
Trigger: GAATGTTTTTACTGTCCTTGGTAGGCTACAGGTTCACAGCTTCAAATCAAGGCCTCCAAGGATTTTATTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR CCA 72 bp ACATTCTTGCATGAGTGTGCGTTTAGTCTGGTCTACTaGTTCACCCTTCAGGGAGAAATCTCATTAAAATGT +
Preference number: 3 (lower is better)
Translates to: TFLHECAFSLVY*FTLQGEISLKC
Trigger: ACATTTTAATGAGATTTCTCCCTGAAGGGTGAACCAGTAGACCAGACTAAACGCACACTCATGCAAGAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR CCA 72 bp ACAATTTTACATTCTTGCATGAGTGTGCGTTTAGTCTaGTCTACTGGTTCACCCTTCAGGGAGAAATCTCAT +
Preference number: 3 (lower is better)
Translates to: TILHSCMSVRLV*STGSPFREKSH
Trigger: ATGAGATTTCTCCCTGAAGGGTGAACCAGTAGACCAGACTAAACGCACACTCATGCAAGAATGTAAAATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR-3UTR CAA 90 bp TACAATTTTACATTCTTGCATGAGTGTGCGTTTAGTCTGGTCTACTGGTTCACCTTTTCTAATGGAGAGTaGTGGGCTGTGCAAATACAA +
Preference number: 3 (lower is better)
Translates to: YNFTFLHECAFSLVYWFTFSNGE*WAVQIQ
Trigger: TTGTATTTGCACAGCCCACAACTCTCCATTAGAAAA...GGTGAACCAGTAGACCAGACTAAACGCACACTCATGCAAGAATGTAAAATTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR-3UTR CAA 90 bp GAAATTCGCAAAGATGGCTCTGCTTATAAAGGGGCCTCAGTGAAATACAATTTTCTGTTTATCCAGTTATaGAGCTGCCAGGATAATCTG +
Preference number: 3 (lower is better)
Translates to: EIRKDGSAYKGASVKYNFLFIQL*SCQDNL
Trigger: CAGATTATCCTGGCAGCTCAATAACTGGATAAACAG...AAAATTGTATTTCACTGAGGCCCCTTTATAAGCAGAGCCATCTTTGCGAATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR TCA 72 bp ACTGCTGCTAGGAAAAACCCAAAGCATGGCTCTGACTaGAACCCGATGAGATATTCTAAAGATATGTTTACA +
Preference number: 3 (lower is better)
Translates to: TAARKNPKHGSD*NPMRYSKDMFT
Trigger: TGTAAACATATCTTTAGAATATCTCATCGGGTTTCAGTCAGAGCCATGCTTTGGGTTTTTCCTAGCAGCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR TCA 72 bp CACCTTTGTTCGGTATATATATGCCTTTGTTACCTCTaGCTCACGTCGCTTAAAGACCAGTTTTGCAAATGT +
Preference number: 3 (lower is better)
Translates to: HLCSVYICLCYL*LTSLKDQFCKC
Trigger: ACATTTGCAAAACTGGTCTTTAAGCGACGTGAGTCAGAGGTAACAAAGGCATATATATACCGAACAAAGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR CCA 72 bp TCTTTTCCCAAAGGAAACTTTCCACAAAGGGGACCATaGTATTCTACAATGCAGAAATATGGATTCAAGAAG +
Preference number: 3 (lower is better)
Translates to: SFPKGNFPQRGP*YSTMQKYGFKK
Trigger: CTTCTTGAATCCATATTTCTGCATTGTAGAATACCATGGTCCCCTTTGTGGAAAGTTTCCTTTGGGAAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR TCA 72 bp AGAGCAAAGAAAACTGCCAAGGGAGCAACCAGCTTATaGGACTTACATTCTATATATAACATAAGGTGGAAA +
Preference number: 3 (lower is better)
Translates to: RAKKTAKGATSL*DLHSIYNIRWK
Trigger: TTTCCACCTTATGTTATATATAGAATGTAAGTCTCATAAGCTGGTTGCTCCCTTGGCAGTTTTCTTTGCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CCA 90 bp TTCCTCAGGACTTCCCTGAGAGTGATGAGAAAGGTGCCCCTCTTCCCCAGCCCAGCATCCCGAGCTTGCTaGCCTACTGACCCCTCTCGG +
Preference number: 4 (lower is better)
Translates to: FLRTSLRVMRKVPLFPSPASRAC*PTDPSR
Trigger: CCGAGAGGGGTCAGTAGGCCAGCAAGCTCGGGATGC...TGGGCTGGGGAAGAGGGGCACCTTTCTCATCACTCTCAGGGAAGTCCTGAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp AGCTCAGGGGCTGCGCCAGCGGGCGGTACCCACGGTTTCTCTTCCCCTACATTCAAGAGGTCAAAGAACTaGAGGCTTCCACCCACCTTC +
Preference number: 4 (lower is better)
Translates to: SSGAAPAGGTHGFSSPTFKRSKN*RLPPTF
Trigger: GAAGGTGGGTGGAAGCCTTCAGTTCTTTGACCTCTT...GAATGTAGGGGAAGAGAAACCGTGGGTACCGCCCGCTGGCGCAGCCCCTGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp TTCCTCAGGACTTCCCTGAGAGTGATGAGAAAGGTGCCCCTCTTCCCCAGCCCAGGCTTGAACCAGCTCTaGCTGGTCAGGCCCAAACCC +
Preference number: 4 (lower is better)
Translates to: FLRTSLRVMRKVPLFPSPGLNQL*LVRPKP
Trigger: GGGTTTGGGCCTGACCAGGCAGAGCTGGTTCAAGCC...TGGGCTGGGGAAGAGGGGCACCTTTCTCATCACTCTCAGGGAAGTCCTGAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp AGCTCAGGGGCTGCGCCAGCGGGCGGTACCCACGGTTTCTCTTCCCCTACATTCGTTAGCTGGGTGTGGTaGCACGTTCCTATATTCCCA +
Preference number: 4 (lower is better)
Translates to: SSGAAPAGGTHGFSSPTFVSWVW*HVPIFP
Trigger: TGGGAATATAGGAACGTGCCACCACACCCAGCTAAC...GAATGTAGGGGAAGAGAAACCGTGGGTACCGCCCGCTGGCGCAGCCCCTGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp GAGGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTCCTGTGCTGCTGTCCCCAGCGTCAGAGTaGTCCCGCTGGAGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: EATGPFAQLQVYNLPVLLSPASE*SRWSSR
Trigger: TCTGCTGCTCCAGCGGGATCACTCTGACGCTGGGGA...CAGCAGCACAGGAAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR TCA 90 bp TTCCTCAGGACTTCCCTGAGAGTGATGAGAAAGGTGCCCCTCTTCCCCAGCCCATGGGTCAGGAAGGGCTaGAGCACTCTTGGAGGTCCA +
Preference number: 4 (lower is better)
Translates to: FLRTSLRVMRKVPLFPSPWVRKG*STLGGP
Trigger: TGGACCTCCAAGAGTGCTTCAGCCCTTCCTGACCCA...TGGGCTGGGGAAGAGGGGCACCTTTCTCATCACTCTCAGGGAAGTCCTGAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp AGCTCAGGGGCTGCGCCAGCGGGCGGTACCCACGGTTTCTCTTCCCCTACATTCATCTTCCTGTGCTGCTaGACAGCTGGAATTCTGACA +
Preference number: 4 (lower is better)
Translates to: SSGAAPAGGTHGFSSPTFIFLCC*TAGILT
Trigger: TGTCAGAATTCCAGCTGTTCAGCAGCACAGGAAGAT...GAATGTAGGGGAAGAGAAACCGTGGGTACCGCCCGCTGGCGCAGCCCCTGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp AGCTCAGGGGCTGCGCCAGCGGGCGGTACCCACGGTTTCTCTTCCCCTACATTCCCTGAGCCAGTGACTTaGAGTAGCACGTGCAATAAT +
Preference number: 4 (lower is better)
Translates to: SSGAAPAGGTHGFSSPTFPEPVT*SSTCNN
Trigger: ATTATTGCACGTGCTACTTCAAGTCACTGGCTCAGG...GAATGTAGGGGAAGAGAAACCGTGGGTACCGCCCGCTGGCGCAGCCCCTGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp CTAAACTCCCCGAAAGATGCCTGGAATGCATGTCGAAGTCATGCTGACAGGTCCACCCGGGAAGCCAGGTaGCCCGCATCCTGTTGCGGT +
Preference number: 4 (lower is better)
Translates to: LNSPKDAWNACRSHADRSTREAR*PASCCG
Trigger: ACCGCAACAGGATGCGGGGCACCTGGCTTCCCGGGT...GGACCTGTCAGCATGACTTCGACATGCATTCCAGGCATCTTTCGGGGAGTTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp GAGGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTCCTGTGCTGCTGGCATCCCGAGCTTGCTaGCCTACTGACCCCTCTCGG +
Preference number: 4 (lower is better)
Translates to: EATGPFAQLQVYNLPVLLASRAC*PTDPSR
Trigger: CCGAGAGGGGTCAGTAGGCCAGCAAGCTCGGGATGC...CAGCAGCACAGGAAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CCA 90 bp TTCCTCAGGACTTCCCTGAGAGTGATGAGAAAGGTGCCCCTCTTCCCCAGCCCAGTGCCTCAGCCACCTTaGTTCTGTGGGTCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: FLRTSLRVMRKVPLFPSPVPQPP*FCGSGR
Trigger: CCTTCCTGACCCACAGAACCAAGGTGGCTGAGGCAC...TGGGCTGGGGAAGAGGGGCACCTTTCTCATCACTCTCAGGGAAGTCCTGAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp GAGGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTCCTGTGCTGCTGCTCCACAATGCAGGCTaGCTCGGAGAACGCTTCGGG +
Preference number: 4 (lower is better)
Translates to: EATGPFAQLQVYNLPVLLLHNAG*LGERFG
Trigger: CCCGAAGCGTTCTCCGAGTCAGCCTGCATTGTGGAG...CAGCAGCACAGGAAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR TCA 90 bp GAGGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTCCTGTGCTGCTGTTTCTGGGAGCCAGCTaGGGTCCTGTCTTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: EATGPFAQLQVYNLPVLLFLGAS*GPVFLG
Trigger: CCCCAGGAAGACAGGACCTCAGCTGGCTCCCAGAAA...CAGCAGCACAGGAAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CCA 90 bp GGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTCCTGTGCTGCTGAATCCTCGCTCTCCGGGTaGGCGGCTGTCAGGTTAGAG +
Preference number: 4 (lower is better)
Translates to: GNRTIRTVAGVQSSCAAESSLSG*AAVRLE
Trigger: CTCTAACCTGACAGCCGCCCACCCGGAGAGCGAGGA...TTCAGCAGCACAGGAAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CCA 90 bp GAGGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTCCTGTGCTGCTGAGAATGGAGTGTTCCTaGGCCAAGGCCGCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: EATGPFAQLQVYNLPVLLRMECS*AKAASS
Trigger: GGAGCTGGCGGCCTTGGCCCAGGAACACTCCATTCT...CAGCAGCACAGGAAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCCTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
3UTR CAA 72 bp GGCTGCAAAGCAGCAGAGGGACGCTCATACAGCACGTaGGGGCCTTCTAATGAACCCCATTACTCGGAAGGC +
Preference number: 4 (lower is better)
Translates to: GCKAAEGRSYST*GPSNEPHYSEG
Trigger: GCCTTCCGAGTAATGGGGTTCATTAGAAGGCCCCAACGTGCTGTATGAGCGTCCCTCTGCTGCTTTGCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR CAA 72 bp TCCAGGAAGAGCTCACACTGCAAAGCAGGCTGCCGTTaGCAGCAAACCACACATGACACCAGCCTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: SRKSSHCKAGCR*QQTTHDTSLSQ
Trigger: CTGGCTCAGGCTGGTGTCATGTGTGGTTTGCTGCAAACGGCAGCCTGCTTTGCAGTGTGAGCTCTTCCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp TCGGAAGGCAGCATTTCCATGCAGAGTGAGTCGCCAGCAGGCACTTGGCTTTGCACTGACCCCTCTCGGTaGATGAAGGGAATCAGAAGG +
Preference number: 4 (lower is better)
Translates to: SEGSISMQSESPAGTWLCTDPSR*MKGIRR
Trigger: CCTTCTGATTCCCTTCATTCACCGAGAGGGGTCAGT...GCAAAGCCAAGTGCCTGCTGGCGACTCACTCTGCATGGAAATGCTGCCTTCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp AAACAGACCTGGGAATCAGTCCACATGACGGCCACAGCCAAGCTGATTTGGAGATCCCAGGCAGATAGCTaGGGCTCTGCCGGCACCATA +
Preference number: 4 (lower is better)
Translates to: KQTWESVHMTATAKLIWRSQADS*GSAGTI
Trigger: TATGGTGCCGGCAGAGCCTCAGCTATCTGCCTGGGA...TCTCCAAATCAGCTTGGCTGTGGCCGTCATGTGGACTGATTCCCAGGTCTGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp TCGGAAGGCAGCATTTCCATGCAGAGTGAGTCGCCAGCAGGCACTTGGCTTTGCGCTGTGCTTCCCTCCTaGACACAACCTAGACACACT +
Preference number: 4 (lower is better)
Translates to: SEGSISMQSESPAGTWLCAVLPS*TQPRHT
Trigger: AGTGTGTCTAGGTTGTGTTCAGGAGGGAAGCACAGC...GCAAAGCCAAGTGCCTGCTGGCGACTCACTCTGCATGGAAATGCTGCCTTCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp CAGGTGACCTGTTTGCATTTACATCCAAGGTCCCAAAGTGGGCTGTACAGTTCCCTGCAGGCATCACGATaGAGGCGGGGCTGTCTGCAC +
Preference number: 4 (lower is better)
Translates to: QVTCLHLHPRSQSGLYSSLQASR*RRGCLH
Trigger: GTGCAGACAGCCCCGCCTTCATCGTGATGCCTGCAG...GGAACTGTACAGCCCACTTTGGGACCTTGGATGTAAATGCAAACAGGTCACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp AGCTCAGGGGCTGCGCCAGCGGGCGGTACCCACGGTTTCTCTTCCCCTACATTCTCTAACATTTGGCTCTaGTGGAAACCCCTAGAAGAA +
Preference number: 4 (lower is better)
Translates to: SSGAAPAGGTHGFSSPTFSNIWL*WKPLEE
Trigger: TTCTTCTAGGGGTTTCCAGCAGAGCCAAATGTTAGA...GAATGTAGGGGAAGAGAAACCGTGGGTACCGCCCGCTGGCGCAGCCCCTGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp GAGGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTCCTGTGCTGCTGTGCAGCAGAGGCTGGTaGGACTGGGTGACCAACATC +
Preference number: 4 (lower is better)
Translates to: EATGPFAQLQVYNLPVLLCSRGW*DWVTNI
Trigger: GATGTTGGTCACCCAGTCGCACCAGCCTCTGCTGCA...CAGCAGCACAGGAAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR GCA 90 bp GAGGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTCCTGTGCTGCTGCACGGCAGTCCCTCATaGAGCGGAGGATGTTGGTGT +
Preference number: 4 (lower is better)
Translates to: EATGPFAQLQVYNLPVLLHGSPS*SGGCWC
Trigger: ACACCAACATCCTCCGCTGCATGAGGGACTGCCGTG...CAGCAGCACAGGAAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR GCA 90 bp ATCCACAGGGCAAAAAGGGGCCTTGTTACAGGTGGGCCTTTCATAGACTTGTCCAGGCCGAGCTCACACTaGCCTCCTCCGTCAGACTCT +
Preference number: 4 (lower is better)
Translates to: IHRAKRGLVTGGPFIDLSRPSSH*PPPSDS
Trigger: AGAGTCTGACGGAGGAGGGCAGTGTGAGCTCGGCCT...GGACAAGTCTATGAAAGGCCCACCTGTAACAAGGCCCCTTTTTGCCCTGTGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp AAACAGACCTGGGAATCAGTCCACATGACGGCCACAGCCAAGCTGATTTGGAGAGTTAGAGCTGTGCTCTaGCTCAGGGGCAGGGGATGC +
Preference number: 4 (lower is better)
Translates to: KQTWESVHMTATAKLIWRVRAVL*LRGRGC
Trigger: GCATCCCCTGCCCCTGAGGCAGAGCACAGCTCTAAC...TCTCCAAATCAGCTTGGCTGTGGCCGTCATGTGGACTGATTCCCAGGTCTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp ATGGCTGTGGCTCTAAGTATAATCCTGCCTCTTGGAGCAGGCTGCAAAGCAGCAGTCAGGTTAGAGCTGTaGTCTGCCTCAGGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: MAVALSIILPLGAGCKAAVRLEL*SASGAG
Trigger: CCCTGCCCCTGAGGCAGAGCACAGCTCTAACCTGAC...TGCTGCTTTGCAGCCTGCTCCAAGAGGCAGGATTATACTTAGAGCCACAGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp GGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTCCTGTGCTGCTGAAGTCAGGTTAGAGCTGTaGTCTGCCTCAGGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GNRTIRTVAGVQSSCAAEVRLEL*SASGAG
Trigger: CCCTGCCCCTGAGGCAGAGCACAGCTCTAACCTGAC...TTCAGCAGCACAGGAAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CCA 90 bp TCGGAAGGCAGCATTTCCATGCAGAGTGAGTCGCCAGCAGGCACTTGGCTTTGCAGAGGCTGGTGCGACTaGGTGACCAACATCTCATAC +
Preference number: 4 (lower is better)
Translates to: SEGSISMQSESPAGTWLCRGWCD*VTNISY
Trigger: GTATGAGATGTTGGTCACCCAGTCGCACCAGCCTCT...GCAAAGCCAAGTGCCTGCTGGCGACTCACTCTGCATGGAAATGCTGCCTTCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp ATCCACAGGGCAAAAAGGGGCCTTGTTACAGGTGGGCCTTTCATAGACTTGTCCGAGGTCCTGTCTTCCTaGGGAGTTGTTGCGGGAGCC +
Preference number: 4 (lower is better)
Translates to: IHRAKRGLVTGGPFIDLSEVLSS*GVVAGA
Trigger: GGCTCCCGCAACAACTCCCCAGGAAGACAGGACCTC...GGACAAGTCTATGAAAGGCCCACCTGTAACAAGGCCCCTTTTTGCCCTGTGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp ATCCACAGGGCAAAAAGGGGCCTTGTTACAGGTGGGCCTTTCATAGACTTGTCCATCATCATAAGGCCCTaGGGAGCCCACGTCAGCCCC +
Preference number: 4 (lower is better)
Translates to: IHRAKRGLVTGGPFIDLSIIIRP*GAHVSP
Trigger: GGGGCTGACGTGGGCTCCCCAGGGCCTTATGATGAT...GGACAAGTCTATGAAAGGCCCACCTGTAACAAGGCCCCTTTTTGCCCTGTGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp CTGGGGACGACACACGTCCTGGAAGTAAAATCCAAAGGGACAGATGATATGTGCTCCTCGCTCTCCGGGTaGGCGGCTGTCAGGTTAGAG +
Preference number: 4 (lower is better)
Translates to: LGTTHVLEVKSKGTDDMCSSLSG*AAVRLE
Trigger: CTCTAACCTGACAGCCGCCCACCCGGAGAGCGAGGA...GCACATATCATCTGTCCCTTTGGATTTTACTTCCAGGACGTGTGTCGTCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CCA 90 bp TTCCTCAGGACTTCCCTGAGAGTGATGAGAAAGGTGCCCCTCTTCCCCAGCCCAGAATGGGCCTGTGAATaGGGTGCTTTGAGTCCTCAC +
Preference number: 4 (lower is better)
Translates to: FLRTSLRVMRKVPLFPSPEWACE*GALSPH
Trigger: GTGAGGACTCAAAGCACCCCATTCACAGGCCCATTC...TGGGCTGGGGAAGAGGGGCACCTTTCTCATCACTCTCAGGGAAGTCCTGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp TTCCTCAGGACTTCCCTGAGAGTGATGAGAAAGGTGCCCCTCTTCCCCAGCCCAAAGTCTACTTCAGGCTaGACCCAGTGGCTCACACCT +
Preference number: 4 (lower is better)
Translates to: FLRTSLRVMRKVPLFPSPKSTSG*TQWLTP
Trigger: AGGTGTGAGCCACTGGGTCCAGCCTGAAGTAGACTT...TGGGCTGGGGAAGAGGGGCACCTTTCTCATCACTCTCAGGGAAGTCCTGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp AGCTCAGGGGCTGCGCCAGCGGGCGGTACCCACGGTTTCTCTTCCCCTACATTCAATCACATCTCTAACTaGCTATTCCAGCACTCCCAT +
Preference number: 4 (lower is better)
Translates to: SSGAAPAGGTHGFSSPTFNHISN*LFQHSH
Trigger: ATGGGAGTGCTGGAATAGCCAGTTAGAGATGTGATT...GAATGTAGGGGAAGAGAAACCGTGGGTACCGCCCGCTGGCGCAGCCCCTGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp GGGACAGATGATATGTGCTTTCGTGATGGAGGCAGGAGGAGCTCCATCTTTACTCTCCACAATGCAGGCTaGCTCGGAGAACGCTTCGGG +
Preference number: 4 (lower is better)
Translates to: GTDDMCFRDGGRRSSIFTLHNAG*LGERFG
Trigger: CCCGAAGCGTTCTCCGAGTCAGCCTGCATTGTGGAG...AGTAAAGATGGAGCTCCTCCTGCCTCCATCACGAAAGCACATATCATCTGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR TCA 90 bp GGGACAGATGATATGTGCTTTCGTGATGGAGGCAGGAGGAGCTCCATCTTTACTGGTCATACTGGGCAATaGGCTCCTCGCTCTCCGGGT +
Preference number: 4 (lower is better)
Translates to: GTDDMCFRDGGRRSSIFTGHTGQ*APRSPG
Trigger: ACCCGGAGAGCGAGGAGCTCATTGCCCAGTATGACC...AGTAAAGATGGAGCTCCTCCTGCCTCCATCACGAAAGCACATATCATCTGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR TCA 90 bp GGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTCCTGTGCTGCTGAAGTGAATGGGGTGCTTTaGGTCCTCACGGGATGGCGA +
Preference number: 4 (lower is better)
Translates to: GNRTIRTVAGVQSSCAAEVNGVL*VLTGWR
Trigger: TCGCCATCCCGTGAGGACTCAAAGCACCCCATTCAC...TTCAGCAGCACAGGAAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR GCA 90 bp TTCCTCAGGACTTCCCTGAGAGTGATGAGAAAGGTGCCCCTCTTCCCCAGCCCATGTAGGCTCACAGCCTaGTGGAGTTTGCTTTCTGTC +
Preference number: 4 (lower is better)
Translates to: FLRTSLRVMRKVPLFPSPCRLTA*WSLLSV
Trigger: GACAGAAAGCAAACTCCAGCAGGCTGTGAGCCTACA...TGGGCTGGGGAAGAGGGGCACCTTTCTCATCACTCTCAGGGAAGTCCTGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp GGGACAGATGATATGTGCTTTCGTGATGGAGGCAGGAGGAGCTCCATCTTTACTTTCCTGGGGAGTTGTTaGGGGAGCCCGAACACAGGG +
Preference number: 4 (lower is better)
Translates to: GTDDMCFRDGGRRSSIFTFLGSC*GSPNTG
Trigger: CCCTGTGTTCGGGCTCCCGCAACAACTCCCCAGGAA...AGTAAAGATGGAGCTCCTCCTGCCTCCATCACGAAAGCACATATCATCTGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR GCA 90 bp CTGGGGACGACACACGTCCTGGAAGTAAAATCCAAAGGGACAGATGATATGTGCTTCCTGGGGAGTTGTTaGGGGAGCCCGAACACAGGG +
Preference number: 4 (lower is better)
Translates to: LGTTHVLEVKSKGTDDMCFLGSC*GSPNTG
Trigger: CCCTGTGTTCGGGCTCCCGCAACAACTCCCCAGGAA...GCACATATCATCTGTCCCTTTGGATTTTACTTCCAGGACGTGTGTCGTCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR GCA 90 bp CTGGGGACGACACACGTCCTGGAAGTAAAATCCAAAGGGACAGATGATATGTGCCCTCTTGGAGCAGGCTaGAAAGCAGCAGAGGGACGC +
Preference number: 4 (lower is better)
Translates to: LGTTHVLEVKSKGTDDMCPLGAG*KAAEGR
Trigger: GCGTCCCTCTGCTGCTTTGCAGCCTGCTCCAAGAGG...GCACATATCATCTGTCCCTTTGGATTTTACTTCCAGGACGTGTGTCGTCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp GCCAAAATGCAGGAGGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTCTTCCGCCACTGCCCTaGCTGTGCATGAAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: AKMQEATGPFAQLQVYNLLPPLP*LCMKGL
Trigger: CAGGCCTTTCATGCACAGGCAGGGCAGTGGCGGAAG...AAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCCTCCTGCATTTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp TGGCCTCGAAGTTTCGGAAAGTACACACCCTCCTTCAGCTTGGAGTTGGTTAGTCCTAACAGCTCACCCTaGCCAGGCCAGGTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: WPRSFGKYTPSFSLELVSPNSSP*PGQVSC
Trigger: ACAGGAGACCTGGCCTGGGCAGGGTGAGCTGTTAGG...ACTAACCAACTCCAAGCTGAAGGAGGGTGTGTACTTTCCGAAACTTCGAGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp TACAATTTTACATTCTTGCATGAGTGTGCGTTTAGTCTGGTCTACTGGTTCACCCGCCAGCTCAGGGGCTaGGCCAGCGGGCGGTACCCA +
Preference number: 4 (lower is better)
Translates to: YNFTFLHECAFSLVYWFTRQLRG*ASGRYP
Trigger: TGGGTACCGCCCGCTGGCGCAGCCCCTGAGCTGGCG...GGTGAACCAGTAGACCAGACTAAACGCACACTCATGCAAGAATGTAAAATTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp GCCAAAATGCAGGAGGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTGAAGGCGGGGCTGTCTaGACTCCTGTGCTTGCGACA +
Preference number: 4 (lower is better)
Translates to: AKMQEATGPFAQLQVYNLEGGAV*TPVLAT
Trigger: TGTCGCAAGCACAGGAGTGCAGACAGCCCCGCCTTC...AAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCCTCCTGCATTTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp AGCTCAGGGGCTGCGCCAGCGGGCGGTACCCACGGTTTCTCTTCCCCTACATTCTCAATAACCTACTGCTaGGTTGTATTTGCTCACTTC +
Preference number: 4 (lower is better)
Translates to: SSGAAPAGGTHGFSSPTFSITYC*VVFAHF
Trigger: GAAGTGAGCAAATACAACCCAGCAGTAGGTTATTGA...GAATGTAGGGGAAGAGAAACCGTGGGTACCGCCCGCTGGCGCAGCCCCTGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp GGGACAGATGATATGTGCTTTCGTGATGGAGGCAGGAGGAGCTCCATCTTTACTGAGGTCCTGTCTTCCTaGGGAGTTGTTGCGGGAGCC +
Preference number: 4 (lower is better)
Translates to: GTDDMCFRDGGRRSSIFTEVLSS*GVVAGA
Trigger: GGCTCCCGCAACAACTCCCCAGGAAGACAGGACCTC...AGTAAAGATGGAGCTCCTCCTGCCTCCATCACGAAAGCACATATCATCTGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CCA 90 bp CTGGGGACGACACACGTCCTGGAAGTAAAATCCAAAGGGACAGATGATATGTGCATCATCATAAGGCCCTaGGGAGCCCACGTCAGCCCC +
Preference number: 4 (lower is better)
Translates to: LGTTHVLEVKSKGTDDMCIIIRP*GAHVSP
Trigger: GGGGCTGACGTGGGCTCCCCAGGGCCTTATGATGAT...GCACATATCATCTGTCCCTTTGGATTTTACTTCCAGGACGTGTGTCGTCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CCA 90 bp CAGGTGACCTGTTTGCATTTACATCCAAGGTCCCAAAGTGGGCTGTACAGTTCCAGAATGGAGTGTTCCTaGGCCAAGGCCGCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: QVTCLHLHPRSQSGLYSSRMECS*AKAASS
Trigger: GGAGCTGGCGGCCTTGGCCCAGGAACACTCCATTCT...GGAACTGTACAGCCCACTTTGGGACCTTGGATGTAAATGCAAACAGGTCACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp GCCAAAATGCAGGAGGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTTCGCCAGCAGGCACTTaGCTTTGCAGGGCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: AKMQEATGPFAQLQVYNLSPAGT*LCRAPG
Trigger: ACCTGGAGCCCTGCAAAGCCAAGTGCCTGCTGGCGA...AAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCCTCCTGCATTTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp TCGGAAGGCAGCATTTCCATGCAGAGTGAGTCGCCAGCAGGCACTTGGCTTTGCCACACACCTGTAGGCTaGGTGTATAATGCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: SEGSISMQSESPAGTWLCHTPVG*VYNAEA
Trigger: AGCCTCAGCATTATACACCCAGCCTACAGGTGTGTG...GCAAAGCCAAGTGCCTGCTGGCGACTCACTCTGCATGGAAATGCTGCCTTCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp AAGGGACAGATGATATGTGCTTTCGTGATGGAGGCAGGAGGAGCTCCATCTTTATTTCTGGGAGCCAGCTaGGGTCCTGTCTTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: KGQMICAFVMEAGGAPSLFLGAS*GPVFLG
Trigger: CCCCAGGAAGACAGGACCTCAGCTGGCTCCCAGAAA...TAAAGATGGAGCTCCTCCTGCCTCCATCACGAAAGCACATATCATCTGTCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR TCA 90 bp CTGGGGACGACACACGTCCTGGAAGTAAAATCCAAAGGGACAGATGATATGTGCGGAGGGGGCCGTTGTTaGTGGGGACACTCTGAACTT +
Preference number: 4 (lower is better)
Translates to: LGTTHVLEVKSKGTDDMCGGGRC*WGHSEL
Trigger: AAGTTCAGAGTGTCCCCATCAACAACGGCCCCCTCC...GCACATATCATCTGTCCCTTTGGATTTTACTTCCAGGACGTGTGTCGTCCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR TCA 90 bp GGGACAGATGATATGTGCTTTCGTGATGGAGGCAGGAGGAGCTCCATCTTTACTGGAGGGGGCCGTTGTTaGTGGGGACACTCTGAACTT +
Preference number: 4 (lower is better)
Translates to: GTDDMCFRDGGRRSSIFTGGGRC*WGHSEL
Trigger: AAGTTCAGAGTGTCCCCATCAACAACGGCCCCCTCC...AGTAAAGATGGAGCTCCTCCTGCCTCCATCACGAAAGCACATATCATCTGTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR TCA 90 bp GAGGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTCCTGTGCTGCTGTCCTTGGGCTCACTGTaGAACGGGTCTGAATTGTCC +
Preference number: 4 (lower is better)
Translates to: EATGPFAQLQVYNLPVLLSLGSL*NGSELS
Trigger: GGACAATTCAGACCCGTTTCACAGTGAGCCCAAGGA...CAGCAGCACAGGAAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR TCA 90 bp GGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTCCTGTGCTGCTGAAACTGCTGAGCTTGAATaGGGAGCCCTGGGAAGTCTC +
Preference number: 4 (lower is better)
Translates to: GNRTIRTVAGVQSSCAAETAELE*GALGSL
Trigger: GAGACTTCCCAGGGCTCCTCATTCAAGCTCAGCAGT...TTCAGCAGCACAGGAAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR TCA 90 bp AAACAGACCTGGGAATCAGTCCACATGACGGCCACAGCCAAGCTGATTTGGAGACATTTCCATGCAGAGTaGGTCGCCAGCAGGCACTTG +
Preference number: 4 (lower is better)
Translates to: KQTWESVHMTATAKLIWRHFHAE*VASRHL
Trigger: CAAGTGCCTGCTGGCGACTCACTCTGCATGGAAATG...TCTCCAAATCAGCTTGGCTGTGGCCGTCATGTGGACTGATTCCCAGGTCTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp GCCAAAATGCAGGAGGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTCCAAACCAGTGCTCCTaGGGCACAACCACCAGACCT +
Preference number: 4 (lower is better)
Translates to: AKMQEATGPFAQLQVYNLPNQCS*GTTTRP
Trigger: AGGTCTGGTGGTTGTGCCTCAGGAGCACTGGTTTGG...AAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCCTCCTGCATTTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp AAGGGACAGATGATATGTGCTTTCGTGATGGAGGCAGGAGGAGCTCCATCTTTAGCAACTTTTCGAAGGTaGGTCAGCCGCGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: KGQMICAFVMEAGGAPSLATFRR*VSRGLR
Trigger: CCTCAGCCCGCGGCTGACGCACCTTCGAAAAGTTGC...TAAAGATGGAGCTCCTCCTGCCTCCATCACGAAAGCACATATCATCTGTCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp TTCCTCAGGACTTCCCTGAGAGTGATGAGAAAGGTGCCCCTCTTCCCCAGCCCAGGCCCTGAAGTGTCATaGATACACTTTGACCAGAGA +
Preference number: 4 (lower is better)
Translates to: FLRTSLRVMRKVPLFPSPGPEVS*IHFDQR
Trigger: TCTCTGGTCAAAGTGTATGCATGACACTTCAGGGCC...TGGGCTGGGGAAGAGGGGCACCTTTCTCATCACTCTCAGGGAAGTCCTGAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp ATCCACAGGGCAAAAAGGGGCCTTGTTACAGGTGGGCCTTTCATAGACTTGTCCACTGCTCCACAGCATTaGAGGTGTGGTTCTTCCGCC +
Preference number: 4 (lower is better)
Translates to: IHRAKRGLVTGGPFIDLSTAPQH*RCGSSA
Trigger: GGCGGAAGAACCACACCTGCAATGCTGTGGAGCAGT...GGACAAGTCTATGAAAGGCCCACCTGTAACAAGGCCCCTTTTTGCCCTGTGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp ATCCACAGGGCAAAAAGGGGCCTTGTTACAGGTGGGCCTTTCATAGACTTGTCCATTTGTCCAGACTGCTaGGGCTGTGCTTCCCTCCTG +
Preference number: 4 (lower is better)
Translates to: IHRAKRGLVTGGPFIDLSICPDC*GCASLL
Trigger: CAGGAGGGAAGCACAGCCGCAGCAGTCTGGACAAAT...GGACAAGTCTATGAAAGGCCCACCTGTAACAAGGCCCCTTTTTGCCCTGTGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp GGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTCCTGTGCTGCTGAATGCCCCGCATCCTGTTaGGGTCCTGAAAACTACTGG +
Preference number: 4 (lower is better)
Translates to: GNRTIRTVAGVQSSCAAECPASC*GPENYW
Trigger: CCAGTAGTTTTCAGGACCGCAACAGGATGCGGGGCA...TTCAGCAGCACAGGAAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp AAGGGACAGATGATATGTGCTTTCGTGATGGAGGCAGGAGGAGCTCCATCTTTACGGAGGATGTTGGTGTaGGCCTCCCACAGGTACTGC +
Preference number: 4 (lower is better)
Translates to: KGQMICAFVMEAGGAPSLRRMLV*ASHRYC
Trigger: GCAGTACCTGTGGGAGGCCCACACCAACATCCTCCG...TAAAGATGGAGCTCCTCCTGCCTCCATCACGAAAGCACATATCATCTGTCCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CCA 90 bp AAGGGACAGATGATATGTGCTTTCGTGATGGAGGCAGGAGGAGCTCCATCTTTATGCAGCGGAGGATGTTaGTGTGGGCCTCCCACAGGT +
Preference number: 4 (lower is better)
Translates to: KGQMICAFVMEAGGAPSLCSGGC*CGPPTG
Trigger: ACCTGTGGGAGGCCCACACCAACATCCTCCGCTGCA...TAAAGATGGAGCTCCTCCTGCCTCCATCACGAAAGCACATATCATCTGTCCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CCA 90 bp CTGGGGACGACACACGTCCTGGAAGTAAAATCCAAAGGGACAGATGATATGTGCGGCTCTTGTCCTTTCTaGGAGCCAGCTGAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: LGTTHVLEVKSKGTDDMCGSCPF*EPAEVL
Trigger: CAGGACCTCAGCTGGCTCCCAGAAAGGACAAGAGCC...GCACATATCATCTGTCCCTTTGGATTTTACTTCCAGGACGTGTGTCGTCCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CCA 90 bp GGGACAGATGATATGTGCTTTCGTGATGGAGGCAGGAGGAGCTCCATCTTTACTTCACGGGATGGCGACTaGCAAAGGCAGCCTCATCTC +
Preference number: 4 (lower is better)
Translates to: GTDDMCFRDGGRRSSIFTSRDGD*QRQPHL
Trigger: GAGATGAGGCTGCCTTTGCCAGTCGCCATCCCGTGA...AGTAAAGATGGAGCTCCTCCTGCCTCCATCACGAAAGCACATATCATCTGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CCA 90 bp TATAGAACAGAGGCCAAAATGCAGGAGGCAACAGGACCATTCGCACAGTTGCAGTCACGGGATGGCGACTaGCAAAGGCAGCCTCATCTC +
Preference number: 4 (lower is better)
Translates to: YRTEAKMQEATGPFAQLQSRDGD*QRQPHL
Trigger: GAGATGAGGCTGCCTTTGCCAGTCGCCATCCCGTGA...CTGCAACTGTGCGAATGGTCCTGTTGCCTCCTGCATTTTGGCCTCTGTTCTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CCA 90 bp CTGGGGACGACACACGTCCTGGAAGTAAAATCCAAAGGGACAGATGATATGTGCGTGCCTCAGCCACCTTaGTTCTGTGGGTCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: LGTTHVLEVKSKGTDDMCVPQPP*FCGSGR
Trigger: CCTTCCTGACCCACAGAACCAAGGTGGCTGAGGCAC...GCACATATCATCTGTCCCTTTGGATTTTACTTCCAGGACGTGTGTCGTCCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CCA 90 bp TCGGAAGGCAGCATTTCCATGCAGAGTGAGTCGCCAGCAGGCACTTGGCTTTGCTCCAAGGTCCCAAAGTaGGCTGTACAGTTCCTGTTT +
Preference number: 4 (lower is better)
Translates to: SEGSISMQSESPAGTWLCSKVPK*AVQFLF
Trigger: AAACAGGAACTGTACAGCCCACTTTGGGACCTTGGA...GCAAAGCCAAGTGCCTGCTGGCGACTCACTCTGCATGGAAATGCTGCCTTCCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp TCGGAAGGCAGCATTTCCATGCAGAGTGAGTCGCCAGCAGGCACTTGGCTTTGCTTCCTGACAAGACCCTaGCTCCATGATGTCTTATCC +
Preference number: 4 (lower is better)
Translates to: SEGSISMQSESPAGTWLCFLTRP*LHDVLS
Trigger: GGATAAGACATCATGGAGCCAGGGTCTTGTCAGGAA...GCAAAGCCAAGTGCCTGCTGGCGACTCACTCTGCATGGAAATGCTGCCTTCCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp TCGGAAGGCAGCATTTCCATGCAGAGTGAGTCGCCAGCAGGCACTTGGCTTTGCCCTTCAGCTTGGAGTTaGTTAGTTCAGGACACAGCT +
Preference number: 4 (lower is better)
Translates to: SEGSISMQSESPAGTWLCPSAWS*LVQDTA
Trigger: AGCTGTGTCCTGAACTAACCAACTCCAAGCTGAAGG...GCAAAGCCAAGTGCCTGCTGGCGACTCACTCTGCATGGAAATGCTGCCTTCCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp TTCCTCAGGACTTCCCTGAGAGTGATGAGAAAGGTGCCCCTCTTCCCCAGCCCAAAGTTAGAAGTGTGCTaGAAAACTGGCTCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: FLRTSLRVMRKVPLFPSPKLEVC*KTGSAP
Trigger: TGGGGCAGAGCCAGTTTTCCAGCACACTTCTAACTT...TGGGCTGGGGAAGAGGGGCACCTTTCTCATCACTCTCAGGGAAGTCCTGAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp GGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTCCTGTGCTGCTGAAGCGACTCATGCTTCCTaGCTTGCACAGTTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: GNRTIRTVAGVQSSCAAEATHAS*LAQFLR
Trigger: CCTGAGGAACTGTGCAAGCCAGGAAGCATGAGTCGC...TTCAGCAGCACAGGAAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR CAA 72 bp GCCAAAATGCAGGAGGCAACAGGACCATTCGCACAGTaGCAGGTGTACAATCTTCCTGTGCTGCTGAACAGC +
Preference number: 4 (lower is better)
Translates to: AKMQEATGPFAQ*QVYNLPVLLNS
Trigger: GCTGTTCAGCAGCACAGGAAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCCTCCTGCATTTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR TCA 90 bp AAACAGACCTGGGAATCAGTCCACATGACGGCCACAGCCAAGCTGATTTGGAGAGAAGAATGTAGGTCGTaGGAAGGTCGGAGCGCAACT +
Preference number: 4 (lower is better)
Translates to: KQTWESVHMTATAKLIWREECRS*EGRSAT
Trigger: AGTTGCGCTCCGACCTTCTCACGACCTACATTCTTC...TCTCCAAATCAGCTTGGCTGTGGCCGTCATGTGGACTGATTCCCAGGTCTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp GGGACAGATGATATGTGCTTTCGTGATGGAGGCAGGAGGAGCTCCATCTTTACTGGTACTGCAGGTAGCTaGTGTCCAGGGCTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: GTDDMCFRDGGRRSSIFTGTAGS*CPGLSH
Trigger: ATGGGAAAGCCCTGGACATCAGCTACCTGCAGTACC...AGTAAAGATGGAGCTCCTCCTGCCTCCATCACGAAAGCACATATCATCTGTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR TCA 90 bp AAGGGACAGATGATATGTGCTTTCGTGATGGAGGCAGGAGGAGCTCCATCTTTAGCCCACGTCAGCCCCTaGGGAGATTCCAGTGTCATA +
Preference number: 4 (lower is better)
Translates to: KGQMICAFVMEAGGAPSLAHVSP*GDSSVI
Trigger: TATGACACTGGAATCTCCTCAGGGGCTGACGTGGGC...TAAAGATGGAGCTCCTCCTGCCTCCATCACGAAAGCACATATCATCTGTCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR TCA 90 bp CTAAACTCCCCGAAAGATGCCTGGAATGCATGTCGAAGTCATGCTGACAGGTCCGTTAGTGTTATCGTGTaGGTTTGCTGCCAGCACCCC +
Preference number: 4 (lower is better)
Translates to: LNSPKDAWNACRSHADRSVSVIV*VCCQHP
Trigger: GGGGTGCTGGCAGCAAACTCACACGATAACACTAAC...GGACCTGTCAGCATGACTTCGACATGCATTCCAGGCATCTTTCGGGGAGTTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp TTCCTCAGGACTTCCCTGAGAGTGATGAGAAAGGTGCCCCTCTTCCCCAGCCCATTGAGGTTAATGTTGTaGTACTCCAGGAACCCTTGG +
Preference number: 4 (lower is better)
Translates to: FLRTSLRVMRKVPLFPSPLRLML*YSRNPW
Trigger: CCAAGGGTTCCTGGAGTATCACAACATTAACCTCAA...TGGGCTGGGGAAGAGGGGCACCTTTCTCATCACTCTCAGGGAAGTCCTGAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp CAGGTGACCTGTTTGCATTTACATCCAAGGTCCCAAAGTGGGCTGTACAGTTCCACCAGCCTGAGCCAGTaGCTTGAAGTAGCACGTGCA +
Preference number: 4 (lower is better)
Translates to: QVTCLHLHPRSQSGLYSSTSLSQ*LEVARA
Trigger: TGCACGTGCTACTTCAAGTCACTGGCTCAGGCTGGT...GGAACTGTACAGCCCACTTTGGGACCTTGGATGTAAATGCAAACAGGTCACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp TCGGAAGGCAGCATTTCCATGCAGAGTGAGTCGCCAGCAGGCACTTGGCTTTGCGGTCACACATCACAGTaGACTTCTGTTCCTGTCTTT +
Preference number: 4 (lower is better)
Translates to: SEGSISMQSESPAGTWLCGHTSQ*TSVPVF
Trigger: AAAGACAGGAACAGAAGTTCACTGTGATGTGTGACC...GCAAAGCCAAGTGCCTGCTGGCGACTCACTCTGCATGGAAATGCTGCCTTCCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp CTAAACTCCCCGAAAGATGCCTGGAATGCATGTCGAAGTCATGCTGACAGGTCCAGTTGGCACCACAGGTaGTGCCATTGCCATCTGTCT +
Preference number: 4 (lower is better)
Translates to: LNSPKDAWNACRSHADRSSWHHR*CHCHLS
Trigger: AGACAGATGGCAATGGCATCACCTGTGGTGCCAACT...GGACCTGTCAGCATGACTTCGACATGCATTCCAGGCATCTTTCGGGGAGTTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp GGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTCCTGTGCTGCTGAACAAAGATTGTGCAGCTaGCAACTCCCCCAAATCCCC +
Preference number: 4 (lower is better)
Translates to: GNRTIRTVAGVQSSCAAEQRLCS*QLPQIP
Trigger: GGGGATTTGGGGGAGTTGTCAGCTGCACAATCTTTG...TTCAGCAGCACAGGAAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp GGGACAGATGATATGTGCTTTCGTGATGGAGGCAGGAGGAGCTCCATCTTTACTAATGCATCCCGAGCTTaGTGGCCTACTGACCCCTCT +
Preference number: 4 (lower is better)
Translates to: GTDDMCFRDGGRRSSIFTNASRA*WPTDPS
Trigger: AGAGGGGTCAGTAGGCCAGCAAGCTCGGGATGCATT...AGTAAAGATGGAGCTCCTCCTGCCTCCATCACGAAAGCACATATCATCTGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR GCA 90 bp ATGGCTGTGGCTCTAAGTATAATCCTGCCTCTTGGAGCAGGCTGCAAAGCAGCACATGATGAAGAGCAATaGATCCCGAGCTTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: MAVALSIILPLGAGCKAAHDEEQ*IPSLLA
Trigger: GGCCAGCAAGCTCGGGATGCATTGCTCTTCATCATG...TGCTGCTTTGCAGCCTGCTCCAAGAGGCAGGATTATACTTAGAGCCACAGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp GCCAAAATGCAGGAGGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTGTGCTGGCTCGGAGATaGTACGCAGGAAAAGGTCCA +
Preference number: 4 (lower is better)
Translates to: AKMQEATGPFAQLQVYNLVLARR*YAGKGP
Trigger: TGGACCTTTTCCTGCGTAGCATCTCCGAGCCAGCAC...AAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCCTCCTGCATTTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR GCA 90 bp GGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTCCTGTGCTGCTGAATCCCATACTCCACAATaGAGGCTGACTCGGAGAACG +
Preference number: 4 (lower is better)
Translates to: GNRTIRTVAGVQSSCAAESHTPQ*RLTRRT
Trigger: CGTTCTCCGAGTCAGCCTGCATTGTGGAGTATGGGA...TTCAGCAGCACAGGAAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR GCA 90 bp ATGGCTGTGGCTCTAAGTATAATCCTGCCTCTTGGAGCAGGCTGCAAAGCAGCATCAGGTTCCCTCTCTTaGTTTGGCTCCTTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: MAVALSIILPLGAGCKAASGSLS*FGSLGS
Trigger: TGAGCCCAAGGAGCCAAAGCAAGAGAGGGAACCTGA...TGCTGCTTTGCAGCCTGCTCCAAGAGGCAGGATTATACTTAGAGCCACAGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp CTGGGGACGACACACGTCCTGGAAGTAAAATCCAAAGGGACAGATGATATGTGCCAGACCAGTCTGCTGTaGTTCATCCCTTCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: LGTTHVLEVKSKGTDDMCQTSLL*FIPSGC
Trigger: GCAGCCAGAAGGGATGAAGCACAGCAGACTGGTCTG...GCACATATCATCTGTCCCTTTGGATTTTACTTCCAGGACGTGTGTCGTCCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp GGGACAGATGATATGTGCTTTCGTGATGGAGGCAGGAGGAGCTCCATCTTTACTCAGCATGGAAGTGGCTaGCATGCCTCTTCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: GTDDMCFRDGGRRSSIFTQHGSG*HASSAG
Trigger: ACCTGCTGAAGAGGCATGGCAGCCACTTCCATGCTG...AGTAAAGATGGAGCTCCTCCTGCCTCCATCACGAAAGCACATATCATCTGTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp TTGGAGACACTGGAAACAACTTTCGACCCTGAGTACCCACTGGCTGCCCAAATTCCAGCCCTAGCACTCTaGATGCTACCTAACAGAGGG +
Preference number: 4 (lower is better)
Translates to: LETLETTFDPEYPLAAQIPALAL*MLPNRG
Trigger: CCCTCTGTTAGGTAGCATGCAGAGTGCTAGGGCTGG...AATTTGGGCAGCCAGTGGGTACTCAGGGTCGAAAGTTGTTTCCAGTGTCTCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp TTCCTCAGGACTTCCCTGAGAGTGATGAGAAAGGTGCCCCTCTTCCCCAGCCCAATGATAATCGTGGTGTaGTGCAGGCATCACGATGAA +
Preference number: 4 (lower is better)
Translates to: FLRTSLRVMRKVPLFPSPMIIVV*CRHHDE
Trigger: TTCATCGTGATGCCTGCAGCACACCACGATTATCAT...TGGGCTGGGGAAGAGGGGCACCTTTCTCATCACTCTCAGGGAAGTCCTGAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp CTGGGGACGACACACGTCCTGGAAGTAAAATCCAAAGGGACAGATGATATGTGCCCTCCACAGTGGGGGTaGTTGTTCCTGAACAAGAGC +
Preference number: 4 (lower is better)
Translates to: LGTTHVLEVKSKGTDDMCPPQWG*LFLNKS
Trigger: GCTCTTGTTCAGGAACAACCACCCCCACTGTGGAGG...GCACATATCATCTGTCCCTTTGGATTTTACTTCCAGGACGTGTGTCGTCCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CCA 90 bp TTGGAGACACTGGAAACAACTTTCGACCCTGAGTACCCACTGGCTGCCCAAATTGCTTCTCCTCCACAGTaGGGGTGGTTGTTCCTGAAC +
Preference number: 4 (lower is better)
Translates to: LETLETTFDPEYPLAAQIASPPQ*GWLFLN
Trigger: GTTCAGGAACAACCACCCCCACTGTGGAGGAGAAGC...AATTTGGGCAGCCAGTGGGTACTCAGGGTCGAAAGTTGTTTCCAGTGTCTCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp GAGGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTCCTGTGCTGCTGTCCACAGTCACCTTATaGAGAGCAGGAGCCAAGACT +
Preference number: 4 (lower is better)
Translates to: EATGPFAQLQVYNLPVLLSTVTL*RAGAKT
Trigger: AGTCTTGGCTCCTGCTCTCCATAAGGTGACTGTGGA...CAGCAGCACAGGAAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCCTC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CCA 90 bp GAGGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTCCTGTGCTGCTGTCAAGGCGAGAAGCTTaGCCGCAGAAACAGAGTAAC +
Preference number: 4 (lower is better)
Translates to: EATGPFAQLQVYNLPVLLSRREA*PQKQSN
Trigger: GTTACTCTGTTTCTGCGGCCAAGCTTCTCGCCTTGA...CAGCAGCACAGGAAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CCA 90 bp TCTCAGTTATTTCACCCAGCCACATGGGTTTTCCTGTTCTCTCTACATCCAGCTTGCAGCGGAGGATGTTaGTGTGGGCCTCCCACAGGT +
Preference number: 4 (lower is better)
Translates to: SQLFHPATWVFLFSLHPACSGGC*CGPPTG
Trigger: ACCTGTGGGAGGCCCACACCAACATCCTCCGCTGCA...AGCTGGATGTAGAGAGAACAGGAAAACCCATGTGGCTGGGTGAAATAACTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp TATCCACAGGGCAAAAAGGGGCCTTGTTACAGGTGGGCCTTTCATAGACTTGTCGAGAGAGCGGACGCTTaGCTGGAAGACCATGTTGGT +
Preference number: 4 (lower is better)
Translates to: YPQGKKGPCYRWAFHRLVERADA*LEDHVG
Trigger: ACCAACATGGTCTTCCAGCCAAGCGTCCGCTCTCTC...GACAAGTCTATGAAAGGCCCACCTGTAACAAGGCCCCTTTTTGCCCTGTGGATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp CTAAATAACCCACTCTCAGTTATTTCACCCAGCCACATGGGTTTTCCTGTTCTCCAACCACCAGACCTGTaGCTGCCCTCAGGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: LNNPLSVISPSHMGFPVLQPPDL*LPSGLH
Trigger: GTGGAGCCCTGAGGGCAGCCACAGGTCTGGTGGTTG...GAGAACAGGAAAACCCATGTGGCTGGGTGAAATAACTGAGAGTGGGTTATTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp GGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTCCTGTGCTGCTGAACACCCACCCACTCCCTaGTTTCTTCATATCCGCCTA +
Preference number: 4 (lower is better)
Translates to: GNRTIRTVAGVQSSCAAEHPPTP*FLHIRL
Trigger: TAGGCGGATATGAAGAAACCAGGGAGTGGGTGGGTG...TTCAGCAGCACAGGAAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp ATGGCTGTGGCTCTAAGTATAATCCTGCCTCTTGGAGCAGGCTGCAAAGCAGCAAAGGAGCACAGCGACTaGTGTAGGAGCCTGTCACAT +
Preference number: 4 (lower is better)
Translates to: MAVALSIILPLGAGCKAAKEHSD*CRSLSH
Trigger: ATGTGACAGGCTCCTACACCAGTCGCTGTGCTCCTT...TGCTGCTTTGCAGCCTGCTCCAAGAGGCAGGATTATACTTAGAGCCACAGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp GCCAAAATGCAGGAGGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTCTGTGTTCTGTTGCCTaGGGAGGAGGTTGGAGGGTT +
Preference number: 4 (lower is better)
Translates to: AKMQEATGPFAQLQVYNLLCSVA*GGGWRV
Trigger: AACCCTCCAACCTCCTCCCCAGGCAACAGAACACAG...AAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCCTCCTGCATTTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp GGGACAGATGATATGTGCTTTCGTGATGGAGGCAGGAGGAGCTCCATCTTTACTGGGGGTGGTTGTTCCTaGACAAGAGCTCAGCAACAT +
Preference number: 4 (lower is better)
Translates to: GTDDMCFRDGGRRSSIFTGGGCS*TRAQQH
Trigger: ATGTTGCTGAGCTCTTGTTCAGGAACAACCACCCCC...AGTAAAGATGGAGCTCCTCCTGCCTCCATCACGAAAGCACATATCATCTGTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR TCA 90 bp TTGGAGACACTGGAAACAACTTTCGACCCTGAGTACCCACTGGCTGCCCAAATTACCCCTCTCGGTGAATaGAGGGAATCAGAAGGGAGA +
Preference number: 4 (lower is better)
Translates to: LETLETTFDPEYPLAAQITPLGE*RESEGR
Trigger: TCTCCCTTCTGATTCCCTTCATTCACCGAGAGGGGT...AATTTGGGCAGCCAGTGGGTACTCAGGGTCGAAAGTTGTTTCCAGTGTCTCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp CTGGGGACGACACACGTCCTGGAAGTAAAATCCAAAGGGACAGATGATATGTGCACCCCTCTCGGTGAATaGAGGGAATCAGAAGGGAGA +
Preference number: 4 (lower is better)
Translates to: LGTTHVLEVKSKGTDDMCTPLGE*RESEGR
Trigger: TCTCCCTTCTGATTCCCTTCATTCACCGAGAGGGGT...GCACATATCATCTGTCCCTTTGGATTTTACTTCCAGGACGTGTGTCGTCCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR TCA 90 bp TATAGAACAGAGGCCAAAATGCAGGAGGCAACAGGACCATTCGCACAGTTGCAGACTGACCCCTCTCGGTaGATGAAGGGAATCAGAAGG +
Preference number: 4 (lower is better)
Translates to: YRTEAKMQEATGPFAQLQTDPSR*MKGIRR
Trigger: CCTTCTGATTCCCTTCATTCACCGAGAGGGGTCAGT...CTGCAACTGTGCGAATGGTCCTGTTGCCTCCTGCATTTTGGCCTCTGTTCTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR TCA 90 bp CTGGGGACGACACACGTCCTGGAAGTAAAATCCAAAGGGACAGATGATATGTGCTTGATGGGGACACTCTaGACTTCAGCCTGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: LGTTHVLEVKSKGTDDMCLMGTL*TSAWAS
Trigger: TGAAGCCCAGGCTGAAGTTCAGAGTGTCCCCATCAA...GCACATATCATCTGTCCCTTTGGATTTTACTTCCAGGACGTGTGTCGTCCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR TCA 90 bp CTGGGGACGACACACGTCCTGGAAGTAAAATCCAAAGGGACAGATGATATGTGCATTCCACTCCTCCTCTaGATCTGTCTCTGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: LGTTHVLEVKSKGTDDMCIPLLL*ICLWLG
Trigger: ACCCAGCCAGAGACAGATTCAGAGGAGGAGTGGAAT...GCACATATCATCTGTCCCTTTGGATTTTACTTCCAGGACGTGTGTCGTCCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR TCA 90 bp CTAAACTCCCCGAAAGATGCCTGGAATGCATGTCGAAGTCATGCTGACAGGTCCGTCCTGGAAGCCTCCTaGATGGGATCTTTGGTTAGT +
Preference number: 4 (lower is better)
Translates to: LNSPKDAWNACRSHADRSVLEAS*MGSLVS
Trigger: ACTAACCAAAGATCCCATTCAGGAGGCTTCCAGGAC...GGACCTGTCAGCATGACTTCGACATGCATTCCAGGCATCTTTCGGGGAGTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp AAACAGACCTGGGAATCAGTCCACATGACGGCCACAGCCAAGCTGATTTGGAGAACCCCAATATCTGCTTaGCGTGATCTGAGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: KQTWESVHMTATAKLIWRTPISA*RDLSCK
Trigger: CTTGCAGCTCAGATCACGTCAAGCAGATATTGGGGT...TCTCCAAATCAGCTTGGCTGTGGCCGTCATGTGGACTGATTCCCAGGTCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp ATCCACAGGGCAAAAAGGGGCCTTGTTACAGGTGGGCCTTTCATAGACTTGTCCCTGCTGCACCACAGCTaGGCAAACCATTTGTCAAGA +
Preference number: 4 (lower is better)
Translates to: IHRAKRGLVTGGPFIDLSLLHHS*ANHLSR
Trigger: TCTTGACAAATGGTTTGCTCAGCTGTGGTGCAGCAG...GGACAAGTCTATGAAAGGCCCACCTGTAACAAGGCCCCTTTTTGCCCTGTGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp GGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTCCTGTGCTGCTGAATTGGAGGCCTTGATTTaGAGCTGTGAACCTGTAGCC +
Preference number: 4 (lower is better)
Translates to: GNRTIRTVAGVQSSCAAELEALI*SCEPVA
Trigger: GGCTACAGGTTCACAGCTTCAAATCAAGGCCTCCAA...TTCAGCAGCACAGGAAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp ATCCACAGGGCAAAAAGGGGCCTTGTTACAGGTGGGCCTTTCATAGACTTGTCCCAGCCTGCTGGAGTTTaGTTTCTGTCGAAACCGATG +
Preference number: 4 (lower is better)
Translates to: IHRAKRGLVTGGPFIDLSQPAGV*FLSKPM
Trigger: CATCGGTTTCGACAGAAAGCAAACTCCAGCAGGCTG...GGACAAGTCTATGAAAGGCCCACCTGTAACAAGGCCCCTTTTTGCCCTGTGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp CTGGGGACGACACACGTCCTGGAAGTAAAATCCAAAGGGACAGATGATATGTGCCATGATGAAGAGCAATaGATCCCGAGCTTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: LGTTHVLEVKSKGTDDMCHDEEQ*IPSLLA
Trigger: GGCCAGCAAGCTCGGGATGCATTGCTCTTCATCATG...GCACATATCATCTGTCCCTTTGGATTTTACTTCCAGGACGTGTGTCGTCCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR GCA 90 bp CTTTACTCTTCCTTTATAGAACAGAGGCCAAAATGCAGGAGGCAACAGGACCATAGGCCGAGCTCACACTaGCCTCCTCCGTCAGACTCT +
Preference number: 4 (lower is better)
Translates to: LYSSFIEQRPKCRRQQDHRPSSH*PPPSDS
Trigger: AGAGTCTGACGGAGGAGGGCAGTGTGAGCTCGGCCT...ATGGTCCTGTTGCCTCCTGCATTTTGGCCTCTGTTCTATAAAGGAAGAGTAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR GCA 90 bp GAGGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTCCTGTGCTGCTGCATCCAAAAGGTTCTTaGCACTTCCTGTCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: EATGPFAQLQVYNLPVLLHPKGS*HFLSWK
Trigger: CTTCCAGGACAGGAAGTGGCAAGAACCTTTTGGATG...CAGCAGCACAGGAAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR GCA 90 bp TGGCCTCGAAGTTTCGGAAAGTACACACCCTCCTTCAGCTTGGAGTTGGTTAGTAAGGCAGCATTTCCATaGAGAGTGAGTCGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: WPRSFGKYTPSFSLELVSKAAFP*RVSRQQ
Trigger: CTGCTGGCGACTCACTCTGCATGGAAATGCTGCCTT...ACTAACCAACTCCAAGCTGAAGGAGGGTGTGTACTTTCCGAAACTTCGAGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp TATCCACAGGGCAAAAAGGGGCCTTGTTACAGGTGGGCCTTTCATAGACTTGTCTCTCCTGCCTGTCACTaGACACACCAGTCATCTCTG +
Preference number: 4 (lower is better)
Translates to: YPQGKKGPCYRWAFHRLVSPACH*THQSSL
Trigger: CAGAGATGACTGGTGTGTGCAGTGACAGGCAGGAGA...GACAAGTCTATGAAAGGCCCACCTGTAACAAGGCCCCTTTTTGCCCTGTGGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp GAGGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTCCTGTGCTGCTGGAAGTTACATTCTCCTaGCTGTCACTGCACACACCA +
Preference number: 4 (lower is better)
Translates to: EATGPFAQLQVYNLPVLLEVTFS*LSLHTP
Trigger: TGGTGTGTGCAGTGACAGGCAGGAGAATGTAACTTC...CAGCAGCACAGGAAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCCTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp GGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTCCTGTGCTGCTGAAAAGCAGGCTGCCGTTTaGAGCAAACCACACATGACA +
Preference number: 4 (lower is better)
Translates to: GNRTIRTVAGVQSSCAAEKQAAV*SKPHMT
Trigger: TGTCATGTGTGGTTTGCTGCAAACGGCAGCCTGCTT...TTCAGCAGCACAGGAAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp TATCCACAGGGCAAAAAGGGGCCTTGTTACAGGTGGGCCTTTCATAGACTTGTCCACTGCAAAGCAGGCTaGCGTTTGCAGCAAACCACA +
Preference number: 4 (lower is better)
Translates to: YPQGKKGPCYRWAFHRLVHCKAG*RLQQTT
Trigger: TGTGGTTTGCTGCAAACGGCAGCCTGCTTTGCAGTG...GACAAGTCTATGAAAGGCCCACCTGTAACAAGGCCCCTTTTTGCCCTGTGGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp ATGGCTGTGGCTCTAAGTATAATCCTGCCTCTTGGAGCAGGCTGCAAAGCAGCAGACCCATATTTTGCCTaGGTGTTCTTCAAGGGGTCG +
Preference number: 4 (lower is better)
Translates to: MAVALSIILPLGAGCKAADPYFA*VFFKGS
Trigger: CGACCCCTTGAAGAACACCCAGGCAAAATATGGGTC...TGCTGCTTTGCAGCCTGCTCCAAGAGGCAGGATTATACTTAGAGCCACAGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp GCCAAAATGCAGGAGGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTAGAGGCTGGTGCGACTaGGTGACCAACATCTCATAC +
Preference number: 4 (lower is better)
Translates to: AKMQEATGPFAQLQVYNLRGWCD*VTNISY
Trigger: GTATGAGATGTTGGTCACCCAGTCGCACCAGCCTCT...AAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCCTCCTGCATTTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CCA 90 bp AAGGGACAGATGATATGTGCTTTCGTGATGGAGGCAGGAGGAGCTCCATCTTTAGCTTCTCCTCCACAGTaGGGGTGGTTGTTCCTGAAC +
Preference number: 4 (lower is better)
Translates to: KGQMICAFVMEAGGAPSLASPPQ*GWLFLN
Trigger: GTTCAGGAACAACCACCCCCACTGTGGAGGAGAAGC...TAAAGATGGAGCTCCTCCTGCCTCCATCACGAAAGCACATATCATCTGTCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CCA 90 bp AAACAGACCTGGGAATCAGTCCACATGACGGCCACAGCCAAGCTGATTTGGAGAAAGTTGGCAGCGCCTTaGTCTTCACTAGTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: KQTWESVHMTATAKLIWRKLAAP*SSLVWK
Trigger: CTTCCACACTAGTGAAGACCAAGGCGCTGCCAACTT...TCTCCAAATCAGCTTGGCTGTGGCCGTCATGTGGACTGATTCCCAGGTCTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp AAACAGACCTGGGAATCAGTCCACATGACGGCCACAGCCAAGCTGATTTGGAGATGTGATGGGCCACCATaGTGTTCTCAGCAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: KQTWESVHMTATAKLIWRCDGPP*CSQQKE
Trigger: CTCTTTCTGCTGAGAACACCATGGTGGCCCATCACA...TCTCCAAATCAGCTTGGCTGTGGCCGTCATGTGGACTGATTCCCAGGTCTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp TGGCCTCGAAGTTTCGGAAAGTACACACCCTCCTTCAGCTTGGAGTTGGTTAGTTCTCCTGGATGTGTTTaGGGGGATCAATGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: WPRSFGKYTPSFSLELVSSPGCV*GDQWVL
Trigger: CAGCACCCATTGATCCCCCCAAACACATCCAGGAGA...ACTAACCAACTCCAAGCTGAAGGAGGGTGTGTACTTTCCGAAACTTCGAGGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp CTGGGGACGACACACGTCCTGGAAGTAAAATCCAAAGGGACAGATGATATGTGCTCTCCTGGATGTGTTTaGGGGGATCAATGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: LGTTHVLEVKSKGTDDMCSPGCV*GDQWVL
Trigger: CAGCACCCATTGATCCCCCCAAACACATCCAGGAGA...GCACATATCATCTGTCCCTTTGGATTTTACTTCCAGGACGTGTGTCGTCCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CCA 90 bp CAGGTGACCTGTTTGCATTTACATCCAAGGTCCCAAAGTGGGCTGTACAGTTCCCTTGCTTTGGCTCCTTaGGCTCACTGTGAAACGGGT +
Preference number: 4 (lower is better)
Translates to: QVTCLHLHPRSQSGLYSSLALAP*AHCETG
Trigger: ACCCGTTTCACAGTGAGCCCAAGGAGCCAAAGCAAG...GGAACTGTACAGCCCACTTTGGGACCTTGGATGTAAATGCAAACAGGTCACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp GCCAAAATGCAGGAGGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTTTCCCTCTCTTGCTTTaGCTCCTTGGGCTCACTGTG +
Preference number: 4 (lower is better)
Translates to: AKMQEATGPFAQLQVYNLFPLLL*LLGLTV
Trigger: CACAGTGAGCCCAAGGAGCCAAAGCAAGAGAGGGAA...AAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCCTCCTGCATTTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CCA 90 bp TATAGAACAGAGGCCAAAATGCAGGAGGCAACAGGACCATTCGCACAGTTGCAGTTCCCTCTCTTGCTTTaGCTCCTTGGGCTCACTGTG +
Preference number: 4 (lower is better)
Translates to: YRTEAKMQEATGPFAQLQFPLLL*LLGLTV
Trigger: CACAGTGAGCCCAAGGAGCCAAAGCAAGAGAGGGAA...CTGCAACTGTGCGAATGGTCCTGTTGCCTCCTGCATTTTGGCCTCTGTTCTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CCA 90 bp GAGGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTCCTGTGCTGCTGATGCTAACTCTGAGTTaGATTCTGGGGCTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: EATGPFAQLQVYNLPVLLMLTLS*ILGLLQ
Trigger: CTGAAGCAGCCCCAGAATCCAACTCAGAGTTAGCAT...CAGCAGCACAGGAAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CCA 90 bp GAGGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTCCTGTGCTGCTGATGATTTGGTCATACTaGGCAATGAGCTCCTCGCTC +
Preference number: 4 (lower is better)
Translates to: EATGPFAQLQVYNLPVLLMIWSY*AMSSSL
Trigger: GAGCGAGGAGCTCATTGCCCAGTATGACCAAATCAT...CAGCAGCACAGGAAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CCA 90 bp CTAAACTCCCCGAAAGATGCCTGGAATGCATGTCGAAGTCATGCTGACAGGTCCATCTCTCCCCACAAATaGGGAAGGCACAGTCTCTAC +
Preference number: 4 (lower is better)
Translates to: LNSPKDAWNACRSHADRSISPHK*GRHSLY
Trigger: GTAGAGACTGTGCCTTCCCCATTTGTGGGGAGAGAT...GGACCTGTCAGCATGACTTCGACATGCATTCCAGGCATCTTTCGGGGAGTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp GGGACAGATGATATGTGCTTTCGTGATGGAGGCAGGAGGAGCTCCATCTTTACTGACTACGCTGATGAATaGGCCTGTGAATGGGGTGCT +
Preference number: 4 (lower is better)
Translates to: GTDDMCFRDGGRRSSIFTDYADE*ACEWGA
Trigger: AGCACCCCATTCACAGGCCCATTCATCAGCGTAGTC...AGTAAAGATGGAGCTCCTCCTGCCTCCATCACGAAAGCACATATCATCTGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CCA 90 bp GGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTCCTGTGCTGCTGAAGGGCTGAAGCACTCTTaGAGGTCCATCCAAAAGGTT +
Preference number: 4 (lower is better)
Translates to: GNRTIRTVAGVQSSCAAEGLKHS*RSIQKV
Trigger: AACCTTTTGGATGGACCTCCAAGAGTGCTTCAGCCC...TTCAGCAGCACAGGAAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CCA 90 bp GGGACAGATGATATGTGCTTTCGTGATGGAGGCAGGAGGAGCTCCATCTTTACTGTGCTGCTGAACAGCTaGAATTCTGACATGGGGCAC +
Preference number: 4 (lower is better)
Translates to: GTDDMCFRDGGRRSSIFTVLLNS*NSDMGH
Trigger: GTGCCCCATGTCAGAATTCCAGCTGTTCAGCAGCAC...AGTAAAGATGGAGCTCCTCCTGCCTCCATCACGAAAGCACATATCATCTGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CCA 90 bp TATCCACAGGGCAAAAAGGGGCCTTGTTACAGGTGGGCCTTTCATAGACTTGTCGCTCATACAGCACGTTaGGGCCTTCTAATGAACCCC +
Preference number: 4 (lower is better)
Translates to: YPQGKKGPCYRWAFHRLVAHTAR*GLLMNP
Trigger: GGGGTTCATTAGAAGGCCCCAACGTGCTGTATGAGC...GACAAGTCTATGAAAGGCCCACCTGTAACAAGGCCCCTTTTTGCCCTGTGGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp TATAGAACAGAGGCCAAAATGCAGGAGGCAACAGGACCATTCGCACAGTTGCAGACACGAAAGCAAGGCTaGCTCCTAACAGCTCACCCT +
Preference number: 4 (lower is better)
Translates to: YRTEAKMQEATGPFAQLQTRKQG*LLTAHP
Trigger: AGGGTGAGCTGTTAGGAGCCAGCCTTGCTTTCGTGT...CTGCAACTGTGCGAATGGTCCTGTTGCCTCCTGCATTTTGGCCTCTGTTCTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR CAA 72 bp GGAATCAGTCCACATGACGGCCACAGCCAAGCTGATTaGGAGACACTGGAAACAACTTTCGACCCTGAGTAC +
Preference number: 4 (lower is better)
Translates to: GISPHDGHSQAD*ETLETTFDPEY
Trigger: GTACTCAGGGTCGAAAGTTGTTTCCAGTGTCTCCAAATCAGCTTGGCTGTGGCCGTCATGTGGACTGATTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp ATGGCTGTGGCTCTAAGTATAATCCTGCCTCTTGGAGCAGGCTGCAAAGCAGCATGGAACAGAGCTGATTaGGTAGGACAACCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: MAVALSIILPLGAGCKAAWNRAD*VGQPAS
Trigger: AGAAGCTGGTTGTCCTACTCAATCAGCTCTGTTCCA...TGCTGCTTTGCAGCCTGCTCCAAGAGGCAGGATTATACTTAGAGCCACAGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp GGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTCCTGTGCTGCTGAATGGAACAGAGCTGATTaGGTAGGACAACCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: GNRTIRTVAGVQSSCAAEWNRAD*VGQPAS
Trigger: AGAAGCTGGTTGTCCTACTCAATCAGCTCTGTTCCA...TTCAGCAGCACAGGAAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR TCA 90 bp GGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTCCTGTGCTGCTGAAAGAATGGAACAGAGCTaGTTGAGTAGGACAACCAGC +
Preference number: 4 (lower is better)
Translates to: GNRTIRTVAGVQSSCAAERMEQS*LSRTTS
Trigger: GCTGGTTGTCCTACTCAATCAGCTCTGTTCCATTCT...TTCAGCAGCACAGGAAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR TCA 90 bp CTGGGGACGACACACGTCCTGGAAGTAAAATCCAAAGGGACAGATGATATGTGCAAGAGTAGAGACCACTaGGCCCAGTTGCAAGTACTG +
Preference number: 4 (lower is better)
Translates to: LGTTHVLEVKSKGTDDMCKSRDH*AQLQVL
Trigger: CAGTACTTGCAACTGGGCTCAGTGGTCTCTACTCTT...GCACATATCATCTGTCCCTTTGGATTTTACTTCCAGGACGTGTGTCGTCCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR TCA 90 bp AAACAGACCTGGGAATCAGTCCACATGACGGCCACAGCCAAGCTGATTTGGAGAACTCCAGGGAGTTCATaGACTGGACAAGAGAAGGAA +
Preference number: 4 (lower is better)
Translates to: KQTWESVHMTATAKLIWRTPGSS*TGQEKE
Trigger: TTCCTTCTCTTGTCCAGTTCATGAACTCCCTGGAGT...TCTCCAAATCAGCTTGGCTGTGGCCGTCATGTGGACTGATTCCCAGGTCTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp CTGGGGACGACACACGTCCTGGAAGTAAAATCCAAAGGGACAGATGATATGTGCGGTGAGCCACCTGTATaGCTGCATTGCAAAACTCCA +
Preference number: 4 (lower is better)
Translates to: LGTTHVLEVKSKGTDDMCGEPPV*LHCKTP
Trigger: TGGAGTTTTGCAATGCAGTCATACAGGTGGCTCACC...GCACATATCATCTGTCCCTTTGGATTTTACTTCCAGGACGTGTGTCGTCCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR TCA 90 bp GCCAAAATGCAGGAGGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTGGTGAGCCACCTGTATaGCTGCATTGCAAAACTCCA +
Preference number: 4 (lower is better)
Translates to: AKMQEATGPFAQLQVYNLGEPPV*LHCKTP
Trigger: TGGAGTTTTGCAATGCAGTCATACAGGTGGCTCACC...AAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCCTCCTGCATTTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR TCA 90 bp GGGACAGATGATATGTGCTTTCGTGATGGAGGCAGGAGGAGCTCCATCTTTACTTTTCGAATCAAGGGGTaGGCCACCTGTATGACTGCA +
Preference number: 4 (lower is better)
Translates to: GTDDMCFRDGGRRSSIFTFRIKG*ATCMTA
Trigger: TGCAGTCATACAGGTGGCTCACCCCTTGATTCGAAA...AGTAAAGATGGAGCTCCTCCTGCCTCCATCACGAAAGCACATATCATCTGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR TCA 90 bp TATAGAACAGAGGCCAAAATGCAGGAGGCAACAGGACCATTCGCACAGTTGCAGTTTCGAATCAAGGGGTaGGCCACCTGTATGACTGCA +
Preference number: 4 (lower is better)
Translates to: YRTEAKMQEATGPFAQLQFRIKG*ATCMTA
Trigger: TGCAGTCATACAGGTGGCTCACCCCTTGATTCGAAA...CTGCAACTGTGCGAATGGTCCTGTTGCCTCCTGCATTTTGGCCTCTGTTCTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR TCA 90 bp TACAATTTTACATTCTTGCATGAGTGTGCGTTTAGTCTGGTCTACTGGTTCACCTCCCCAGCGTCAGAGTaGTCCCGCTGGAGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: YNFTFLHECAFSLVYWFTSPASE*SRWSSR
Trigger: TCTGCTGCTCCAGCGGGATCACTCTGACGCTGGGGA...GGTGAACCAGTAGACCAGACTAAACGCACACTCATGCAAGAATGTAAAATTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp AAGGGACAGATGATATGTGCTTTCGTGATGGAGGCAGGAGGAGCTCCATCTTTAATTCCACTCCTCCTCTaGATCTGTCTCTGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: KGQMICAFVMEAGGAPSLIPLLL*ICLWLG
Trigger: ACCCAGCCAGAGACAGATTCAGAGGAGGAGTGGAAT...TAAAGATGGAGCTCCTCCTGCCTCCATCACGAAAGCACATATCATCTGTCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR TCA 90 bp GGGACAGATGATATGTGCTTTCGTGATGGAGGCAGGAGGAGCTCCATCTTTACTGTCCTGGAAGCCTCCTaGATGGGATCTTTGGTTAGT +
Preference number: 4 (lower is better)
Translates to: GTDDMCFRDGGRRSSIFTVLEAS*MGSLVS
Trigger: ACTAACCAAAGATCCCATTCAGGAGGCTTCCAGGAC...AGTAAAGATGGAGCTCCTCCTGCCTCCATCACGAAAGCACATATCATCTGTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR TCA 90 bp GGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTCCTGTGCTGCTGAACTGCTTGACGTGATCTaGGCTGCAAGAAGAGTAACT +
Preference number: 4 (lower is better)
Translates to: GNRTIRTVAGVQSSCAAELLDVI*AARRVT
Trigger: AGTTACTCTTCTTGCAGCTCAGATCACGTCAAGCAG...TTCAGCAGCACAGGAAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR TCA 90 bp AAAATTATCTGCATTCCAAATTCTCTCCAAGGACATCCGACTTCCCAGGCAGATTCCCAGGCAGATAGCTaGGGCTCTGCCGGCACCATA +
Preference number: 4 (lower is better)
Translates to: KIICIPNSLQGHPTSQADSQADS*GSAGTI
Trigger: TATGGTGCCGGCAGAGCCTCAGCTATCTGCCTGGGA...ATCTGCCTGGGAAGTCGGATGTCCTTGGAGAGAATTTGGAATGCAGATAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR TCA 90 bp TATAGAACAGAGGCCAAAATGCAGGAGGCAACAGGACCATTCGCACAGTTGCAGCTGCTTCAAGATTCCTaGAGCACAAAAGGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: YRTEAKMQEATGPFAQLQLLQDS*STKGPP
Trigger: TGGAGGCCCTTTTGTGCTTCAGGAATCTTGAAGCAG...CTGCAACTGTGCGAATGGTCCTGTTGCCTCCTGCATTTTGGCCTCTGTTCTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp AAGGGACAGATGATATGTGCTTTCGTGATGGAGGCAGGAGGAGCTCCATCTTTAGCTGACCCTTGCTTGTaGGGTGGGAAGCATCTGATT +
Preference number: 4 (lower is better)
Translates to: KGQMICAFVMEAGGAPSLADPCL*GGKHLI
Trigger: AATCAGATGCTTCCCACCTCACAAGCAAGGGTCAGC...TAAAGATGGAGCTCCTCCTGCCTCCATCACGAAAGCACATATCATCTGTCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp GCCAAAATGCAGGAGGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTCCCAAAGCATGGCTCTaGCTGAAACCCGATGAGATA +
Preference number: 4 (lower is better)
Translates to: AKMQEATGPFAQLQVYNLPKAWL*LKPDEI
Trigger: TATCTCATCGGGTTTCAGTCAGAGCCATGCTTTGGG...AAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCCTCCTGCATTTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp CTAAACTCCCCGAAAGATGCCTGGAATGCATGTCGAAGTCATGCTGACAGGTCCTGCCTTTGTTACCTCTaGCTCACGTCGCTTAAAGAC +
Preference number: 4 (lower is better)
Translates to: LNSPKDAWNACRSHADRSCLCYL*LTSLKD
Trigger: GTCTTTAAGCGACGTGAGTCAGAGGTAACAAAGGCA...GGACCTGTCAGCATGACTTCGACATGCATTCCAGGCATCTTTCGGGGAGTTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp CTGGGGACGACACACGTCCTGGAAGTAAAATCCAAAGGGACAGATGATATGTGCTGTAGGCTCACAGCCTaGTGGAGTTTGCTTTCTGTC +
Preference number: 4 (lower is better)
Translates to: LGTTHVLEVKSKGTDDMCCRLTA*WSLLSV
Trigger: GACAGAAAGCAAACTCCAGCAGGCTGTGAGCCTACA...GCACATATCATCTGTCCCTTTGGATTTTACTTCCAGGACGTGTGTCGTCCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR GCA 90 bp GAGGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTCCTGTGCTGCTGGATAGACCCATATTTTaGCTGGGTGTTCTTCAAGGG +
Preference number: 4 (lower is better)
Translates to: EATGPFAQLQVYNLPVLLDRPIF*LGVLQG
Trigger: CCCTTGAAGAACACCCAGGCAAAATATGGGTCTATC...CAGCAGCACAGGAAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR GCA 90 bp AAGGGACAGATGATATGTGCTTTCGTGATGGAGGCAGGAGGAGCTCCATCTTTACAGAATCGGCCCCATTaGAGCATCTTTGGCTTGCTC +
Preference number: 4 (lower is better)
Translates to: KGQMICAFVMEAGGAPSLQNRPH*SIFGLL
Trigger: GAGCAAGCCAAAGATGCTGCAATGGGGCCGATTCTG...TAAAGATGGAGCTCCTCCTGCCTCCATCACGAAAGCACATATCATCTGTCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR GCA 90 bp CTTTACTCTTCCTTTATAGAACAGAGGCCAAAATGCAGGAGGCAACAGGACCATCACGGCAGTCCCTCATaGAGCGGAGGATGTTGGTGT +
Preference number: 4 (lower is better)
Translates to: LYSSFIEQRPKCRRQQDHHGSPS*SGGCWC
Trigger: ACACCAACATCCTCCGCTGCATGAGGGACTGCCGTG...ATGGTCCTGTTGCCTCCTGCATTTTGGCCTCTGTTCTATAAAGGAAGAGTAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR GCA 90 bp CAGGTGACCTGTTTGCATTTACATCCAAGGTCCCAAAGTGGGCTGTACAGTTCCGGGACAGATGATATGTaGTTTCGTGATGGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: QVTCLHLHPRSQSGLYSSGTDDM*FRDGGR
Trigger: CCTGCCTCCATCACGAAAGCACATATCATCTGTCCC...GGAACTGTACAGCCCACTTTGGGACCTTGGATGTAAATGCAAACAGGTCACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp AGACAAACCTTCCAATTTCCTTCCAAACAGGCAGGCTCAAGCTCGTTACTTGCTCAAAAGGGCCTCCACTaGTCCACAGCATTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: RQTFQFPSKQAGSSSLLAQKGLH*STALQV
Trigger: CACCTGCAATGCTGTGGAGCAGTGGAGGCCCTTTTG...AGCAAGTAACGAGCTTGAGCCTGCCTGTTTGGAAGGAAATTGGAAGGTTTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp GCCAAAATGCAGGAGGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTAGAAGCAGACCAGTCTaGTGTGCTTCATCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: AKMQEATGPFAQLQVYNLRSRPV*CASSLL
Trigger: CAGAAGGGATGAAGCACAGCAGACTGGTCTGCTTCT...AAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCCTCCTGCATTTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp TGGCCTCGAAGTTTCGGAAAGTACACACCCTCCTTCAGCTTGGAGTTGGTTAGTAGCAGCACAGACTTCTaGAGCCTCCGTTCCATGAAA +
Preference number: 4 (lower is better)
Translates to: WPRSFGKYTPSFSLELVSSSTDF*SLRSMK
Trigger: TTTCATGGAACGGAGGCTGCAGAAGTCTGTGCTGCT...ACTAACCAACTCCAAGCTGAAGGAGGGTGTGTACTTTCCGAAACTTCGAGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp TCGGAAGGCAGCATTTCCATGCAGAGTGAGTCGCCAGCAGGCACTTGGCTTTGCGTTCTCTCCTCACTCTaGAAGTCTGAATTACAAATG +
Preference number: 4 (lower is better)
Translates to: SEGSISMQSESPAGTWLCVLSSL*KSELQM
Trigger: CATTTGTAATTCAGACTTGCAGAGTGAGGAGAGAAC...GCAAAGCCAAGTGCCTGCTGGCGACTCACTCTGCATGGAAATGCTGCCTTCCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp CAGGTGACCTGTTTGCATTTACATCCAAGGTCCCAAAGTGGGCTGTACAGTTCCTACTGTTCTCTCCACTaGACCGGAGCACCTTTGTTC +
Preference number: 4 (lower is better)
Translates to: QVTCLHLHPRSQSGLYSSYCSLH*TGAPLF
Trigger: GAACAAAGGTGCTCCGGTGCAGTGGAGAGAACAGTA...GGAACTGTACAGCCCACTTTGGGACCTTGGATGTAAATGCAAACAGGTCACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp TATAGAACAGAGGCCAAAATGCAGGAGGCAACAGGACCATTCGCACAGTTGCAGGACCCATATTTTGCCTaGGTGTTCTTCAAGGGGTCG +
Preference number: 4 (lower is better)
Translates to: YRTEAKMQEATGPFAQLQDPYFA*VFFKGS
Trigger: CGACCCCTTGAAGAACACCCAGGCAAAATATGGGTC...CTGCAACTGTGCGAATGGTCCTGTTGCCTCCTGCATTTTGGCCTCTGTTCTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CCA 90 bp AAGGGACAGATGATATGTGCTTTCGTGATGGAGGCAGGAGGAGCTCCATCTTTATTCAGAATGGGTTTGTaGTGCAGCAGAGGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: KGQMICAFVMEAGGAPSLFRMGL*CSRGWC
Trigger: GCACCAGCCTCTGCTGCACCACAAACCCATTCTGAA...TAAAGATGGAGCTCCTCCTGCCTCCATCACGAAAGCACATATCATCTGTCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CCA 90 bp CTGGGGACGACACACGTCCTGGAAGTAAAATCCAAAGGGACAGATGATATGTGCAAGTTGGCAGCGCCTTaGTCTTCACTAGTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: LGTTHVLEVKSKGTDDMCKLAAP*SSLVWK
Trigger: CTTCCACACTAGTGAAGACCAAGGCGCTGCCAACTT...GCACATATCATCTGTCCCTTTGGATTTTACTTCCAGGACGTGTGTCGTCCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CCA 90 bp GGGACAGATGATATGTGCTTTCGTGATGGAGGCAGGAGGAGCTCCATCTTTACTTGTGATGGGCCACCATaGTGTTCTCAGCAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: GTDDMCFRDGGRRSSIFTCDGPP*CSQQKE
Trigger: CTCTTTCTGCTGAGAACACCATGGTGGCCCATCACA...AGTAAAGATGGAGCTCCTCCTGCCTCCATCACGAAAGCACATATCATCTGTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CCA 90 bp GCCAAAATGCAGGAGGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTAGAGTGTCTAGGATGTaGACATTCTCGTGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: AKMQEATGPFAQLQVYNLRVSRM*TFSCWC
Trigger: GCACCAGCACGAGAATGTCCACATCCTAGACACTCT...AAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCCTCCTGCATTTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CCA 90 bp CTGGGGACGACACACGTCCTGGAAGTAAAATCCAAAGGGACAGATGATATGTGCTCAAGGCGAGAAGCTTaGCCGCAGAAACAGAGTAAC +
Preference number: 4 (lower is better)
Translates to: LGTTHVLEVKSKGTDDMCSRREA*PQKQSN
Trigger: GTTACTCTGTTTCTGCGGCCAAGCTTCTCGCCTTGA...GCACATATCATCTGTCCCTTTGGATTTTACTTCCAGGACGTGTGTCGTCCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CCA 90 bp CTTTACTCTTCCTTTATAGAACAGAGGCCAAAATGCAGGAGGCAACAGGACCATGGCTCTTGTCCTTTCTaGGAGCCAGCTGAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: LYSSFIEQRPKCRRQQDHGSCPF*EPAEVL
Trigger: CAGGACCTCAGCTGGCTCCCAGAAAGGACAAGAGCC...ATGGTCCTGTTGCCTCCTGCATTTTGGCCTCTGTTCTATAAAGGAAGAGTAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CCA 90 bp AAGGGACAGATGATATGTGCTTTCGTGATGGAGGCAGGAGGAGCTCCATCTTTACTTGCTTTGGCTCCTTaGGCTCACTGTGAAACGGGT +
Preference number: 4 (lower is better)
Translates to: KGQMICAFVMEAGGAPSLLALAP*AHCETG
Trigger: ACCCGTTTCACAGTGAGCCCAAGGAGCCAAAGCAAG...TAAAGATGGAGCTCCTCCTGCCTCCATCACGAAAGCACATATCATCTGTCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CCA 90 bp TTCCTCAGGACTTCCCTGAGAGTGATGAGAAAGGTGCCCCTCTTCCCCAGCCCAAGCTCTTTAATGATTTaGTCATACTGGGCAATGAGC +
Preference number: 4 (lower is better)
Translates to: FLRTSLRVMRKVPLFPSPSSLMI*SYWAMS
Trigger: GCTCATTGCCCAGTATGACCAAATCATTAAAGAGCT...TGGGCTGGGGAAGAGGGGCACCTTTCTCATCACTCTCAGGGAAGTCCTGAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp CTGGGGACGACACACGTCCTGGAAGTAAAATCCAAAGGGACAGATGATATGTGCATCTCTCCCCACAAATaGGGAAGGCACAGTCTCTAC +
Preference number: 4 (lower is better)
Translates to: LGTTHVLEVKSKGTDDMCISPHK*GRHSLY
Trigger: GTAGAGACTGTGCCTTCCCCATTTGTGGGGAGAGAT...GCACATATCATCTGTCCCTTTGGATTTTACTTCCAGGACGTGTGTCGTCCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CCA 90 bp TATAGAACAGAGGCCAAAATGCAGGAGGCAACAGGACCATTCGCACAGTTGCAGGGGCTGAAGCACTCTTaGAGGTCCATCCAAAAGGTT +
Preference number: 4 (lower is better)
Translates to: YRTEAKMQEATGPFAQLQGLKHS*RSIQKV
Trigger: AACCTTTTGGATGGACCTCCAAGAGTGCTTCAGCCC...CTGCAACTGTGCGAATGGTCCTGTTGCCTCCTGCATTTTGGCCTCTGTTCTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CCA 90 bp CTGGGGACGACACACGTCCTGGAAGTAAAATCCAAAGGGACAGATGATATGTGCGCTGGAATTCTGACATaGGGCACTTCCAGACATCAC +
Preference number: 4 (lower is better)
Translates to: LGTTHVLEVKSKGTDDMCAGILT*GTSRHH
Trigger: GTGATGTCTGGAAGTGCCCCATGTCAGAATTCCAGC...GCACATATCATCTGTCCCTTTGGATTTTACTTCCAGGACGTGTGTCGTCCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CCA 90 bp AAGGGACAGATGATATGTGCTTTCGTGATGGAGGCAGGAGGAGCTCCATCTTTAGTGCTGCTGAACAGCTaGAATTCTGACATGGGGCAC +
Preference number: 4 (lower is better)
Translates to: KGQMICAFVMEAGGAPSLVLLNS*NSDMGH
Trigger: GTGCCCCATGTCAGAATTCCAGCTGTTCAGCAGCAC...TAAAGATGGAGCTCCTCCTGCCTCCATCACGAAAGCACATATCATCTGTCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CCA 90 bp CTGGGGACGACACACGTCCTGGAAGTAAAATCCAAAGGGACAGATGATATGTGCTATAATCCTGCCTCTTaGAGCAGGCTGCAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: LGTTHVLEVKSKGTDDMCYNPAS*SRLQSS
Trigger: GCTGCTTTGCAGCCTGCTCCAAGAGGCAGGATTATA...GCACATATCATCTGTCCCTTTGGATTTTACTTCCAGGACGTGTGTCGTCCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp CTGGGGACGACACACGTCCTGGAAGTAAAATCCAAAGGGACAGATGATATGTGCTTCCCCTCTTGGTGGTaGTTTAACATGGCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: LGTTHVLEVKSKGTDDMCFPSWW*FNMAVA
Trigger: AGCCACAGCCATGTTAAACCACCACCAAGAGGGGAA...GCACATATCATCTGTCCCTTTGGATTTTACTTCCAGGACGTGTGTCGTCCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp TGTAGGAGCCTGTCACATAGAGAAGTGTCCACACTCTCGGACCATATCTTTAAGACAGCATTGCAGGTGTaGTTCTTCCGCCACTGCCCT +
Preference number: 4 (lower is better)
Translates to: CRSLSHREVSTLSDHIFKTALQV*FFRHCP
Trigger: AGGGCAGTGGCGGAAGAACCACACCTGCAATGCTGT...CTTAAAGATATGGTCCGAGAGTGTGGACACTTCTCTATGTGACAGGCTCCTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR CAA 72 bp AATTTCCTTCCAAACAGGCAGGCTCAAGCTCGTTACTaGCTTCGCACCTGCAGAACTGGGCCCAAAATAGAG +
Preference number: 4 (lower is better)
Translates to: NFLPNRQAQARY*LRTCRTGPKIE
Trigger: CTCTATTTTGGGCCCAGTTCTGCAGGTGCGAAGCAAGTAACGAGCTTGAGCCTGCCTGTTTGGAAGGAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp AGACAAACCTTCCAATTTCCTTCCAAACAGGCAGGCTCAAGCTCGTTACTTGCTTCCTTGGGCTCACTGTaGAACGGGTCTGAATTGTCC +
Preference number: 4 (lower is better)
Translates to: RQTFQFPSKQAGSSSLLASLGSL*NGSELS
Trigger: GGACAATTCAGACCCGTTTCACAGTGAGCCCAAGGA...AGCAAGTAACGAGCTTGAGCCTGCCTGTTTGGAAGGAAATTGGAAGGTTTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp GCCAAAATGCAGGAGGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTCATGTTCTCCAGCTTTaGCAGGACTACGCTGATGAA +
Preference number: 4 (lower is better)
Translates to: AKMQEATGPFAQLQVYNLHVLQL*QDYADE
Trigger: TTCATCAGCGTAGTCCTGTCAAAGCTGGAGAACATG...AAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCCTCCTGCATTTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR TCA 90 bp CTAAATAACCCACTCTCAGTTATTTCACCCAGCCACATGGGTTTTCCTGTTCTCACTGCTGAGCTTGAATaGGGAGCCCTGGGAAGTCTC +
Preference number: 4 (lower is better)
Translates to: LNNPLSVISPSHMGFPVLTAELE*GALGSL
Trigger: GAGACTTCCCAGGGCTCCTCATTCAAGCTCAGCAGT...GAGAACAGGAAAACCCATGTGGCTGGGTGAAATAACTGAGAGTGGGTTATTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp TGGCCTCGAAGTTTCGGAAAGTACACACCCTCCTTCAGCTTGGAGTTGGTTAGTCTGCTTGACGTGATCTaGGCTGCAAGAAGAGTAACT +
Preference number: 4 (lower is better)
Translates to: WPRSFGKYTPSFSLELVSLLDVI*AARRVT
Trigger: AGTTACTCTTCTTGCAGCTCAGATCACGTCAAGCAG...ACTAACCAACTCCAAGCTGAAGGAGGGTGTGTACTTTCCGAAACTTCGAGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp GCCAAAATGCAGGAGGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTATCTTCCTGTGCTGCTaGACAGCTGGAATTCTGACA +
Preference number: 4 (lower is better)
Translates to: AKMQEATGPFAQLQVYNLIFLCC*TAGILT
Trigger: TGTCAGAATTCCAGCTGTTCAGCAGCACAGGAAGAT...AAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCCTCCTGCATTTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR TCA 90 bp TATCCACAGGGCAAAAAGGGGCCTTGTTACAGGTGGGCCTTTCATAGACTTGTCGTCTTGCTTGGACTATaGAACACGAAAGCAAGGCTG +
Preference number: 4 (lower is better)
Translates to: YPQGKKGPCYRWAFHRLVVLLGL*NTKARL
Trigger: CAGCCTTGCTTTCGTGTTTCATAGTCCAAGCAAGAC...GACAAGTCTATGAAAGGCCCACCTGTAACAAGGCCCCTTTTTGCCCTGTGGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp CTTTACTCTTCCTTTATAGAACAGAGGCCAAAATGCAGGAGGCAACAGGACCATGGCATATGCAGATACTaGACACCACGCCGGGACCAT +
Preference number: 4 (lower is better)
Translates to: LYSSFIEQRPKCRRQQDHGICRY*TPRRDH
Trigger: ATGGTCCCGGCGTGGTGTTCAGTATCTGCATATGCC...ATGGTCCTGTTGCCTCCTGCATTTTGGCCTCTGTTCTATAAAGGAAGAGTAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp AAACAGACCTGGGAATCAGTCCACATGACGGCCACAGCCAAGCTGATTTGGAGATTGAAGAGACACTGGTaGTACCAACTACTAGGCTTC +
Preference number: 4 (lower is better)
Translates to: KQTWESVHMTATAKLIWRLKRHW*YQLLGF
Trigger: GAAGCCTAGTAGTTGGTATCACCAGTGTCTCTTCAA...TCTCCAAATCAGCTTGGCTGTGGCCGTCATGTGGACTGATTCCCAGGTCTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp TTTAGTCTGGTCTACTGGTTCACCCTTCAGGGAGAAATCTCATTAAAATGTATGTGCCCCAGGCTGGCTTaGACCAGCTCTGCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: FSLVYWFTLQGEISLKCMCPRLA*TSSAWS
Trigger: TGACCAGGCAGAGCTGGTTCAAGCCAGCCTGGGGCA...CATACATTTTAATGAGATTTCTCCCTGAAGGGTGAACCAGTAGACCAGACTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp CTTTACTCTTCCTTTATAGAACAGAGGCCAAAATGCAGGAGGCAACAGGACCATTGGGCAAAGGTGGTCTaGGACTGGAGTCTGACAGGA +
Preference number: 4 (lower is better)
Translates to: LYSSFIEQRPKCRRQQDHWAKVV*DWSLTG
Trigger: TCCTGTCAGACTCCAGTCTCAGACCACCTTTGCCCA...ATGGTCCTGTTGCCTCCTGCATTTTGGCCTCTGTTCTATAAAGGAAGAGTAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp TATAGAACAGAGGCCAAAATGCAGGAGGCAACAGGACCATTCGCACAGTTGCAGATCCTGTTGCGGTCCTaGAAACTACTGGGTCTAAAG +
Preference number: 4 (lower is better)
Translates to: YRTEAKMQEATGPFAQLQILLRS*KLLGLK
Trigger: CTTTAGACCCAGTAGTTTTCAGGACCGCAACAGGAT...CTGCAACTGTGCGAATGGTCCTGTTGCCTCCTGCATTTTGGCCTCTGTTCTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp GGGACAGATGATATGTGCTTTCGTGATGGAGGCAGGAGGAGCTCCATCTTTACTTCTTTCAGAAGGCAGTaGCATTCCTCGCCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: GTDDMCFRDGGRRSSIFTSFRRQ*HSSPFS
Trigger: AGAGAAAGGCGAGGAATGGCACTGCCTTCTGAAAGA...AGTAAAGATGGAGCTCCTCCTGCCTCCATCACGAAAGCACATATCATCTGTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR GCA 90 bp ATGGCTGTGGCTCTAAGTATAATCCTGCCTCTTGGAGCAGGCTGCAAAGCAGCAGAAAAGGTCCAGATATaGAGTTGTGGTCATGACCTC +
Preference number: 4 (lower is better)
Translates to: MAVALSIILPLGAGCKAAEKVQI*SCGHDL
Trigger: GAGGTCATGACCACAACTGCATATCTGGACCTTTTC...TGCTGCTTTGCAGCCTGCTCCAAGAGGCAGGATTATACTTAGAGCCACAGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp GAGGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTCCTGTGCTGCTGTCAGCATCATGTGATTaGAGGGGATCAGATACCTTA +
Preference number: 4 (lower is better)
Translates to: EATGPFAQLQVYNLPVLLSASCD*RGSDTL
Trigger: TAAGGTATCTGATCCCCTGCAATCACATGATGCTGA...CAGCAGCACAGGAAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR GCA 90 bp GCCAAAATGCAGGAGGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTCAGAGCAAAGAAAACTaGCAAGGGAGCAACCAGCTT +
Preference number: 4 (lower is better)
Translates to: AKMQEATGPFAQLQVYNLQSKEN*QGSNQL
Trigger: AAGCTGGTTGCTCCCTTGGCAGTTTTCTTTGCTCTG...AAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCCTCCTGCATTTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR GCA 90 bp AAGGGACAGATGATATGTGCTTTCGTGATGGAGGCAGGAGGAGCTCCATCTTTAGGGACAGATGATATGTaGTTTCGTGATGGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: KGQMICAFVMEAGGAPSLGTDDM*FRDGGR
Trigger: CCTGCCTCCATCACGAAAGCACATATCATCTGTCCC...TAAAGATGGAGCTCCTCCTGCCTCCATCACGAAAGCACATATCATCTGTCCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR GCA 90 bp TACAATTTTACATTCTTGCATGAGTGTGCGTTTAGTCTGGTCTACTGGTTCACCGCAGGCACTTGGCTTTaGAGGGCTCCAGGTGACCTG +
Preference number: 4 (lower is better)
Translates to: YNFTFLHECAFSLVYWFTAGTWL*RAPGDL
Trigger: CAGGTCACCTGGAGCCCTGCAAAGCCAAGTGCCTGC...GGTGAACCAGTAGACCAGACTAAACGCACACTCATGCAAGAATGTAAAATTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp GGGACAGATGATATGTGCTTTCGTGATGGAGGCAGGAGGAGCTCCATCTTTACTTACTTGCTTCGCACCTaGAGAACTGGGCCCAAAATA +
Preference number: 4 (lower is better)
Translates to: GTDDMCFRDGGRRSSIFTYLLRT*RTGPKI
Trigger: TATTTTGGGCCCAGTTCTGCAGGTGCGAAGCAAGTA...AGTAAAGATGGAGCTCCTCCTGCCTCCATCACGAAAGCACATATCATCTGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp CTAAACTCCCCGAAAGATGCCTGGAATGCATGTCGAAGTCATGCTGACAGGTCCGAGAGTTGTGGGCTGTaGAAATACAACCAGACATCA +
Preference number: 4 (lower is better)
Translates to: LNSPKDAWNACRSHADRSESCGL*KYNQTS
Trigger: TGATGTCTGGTTGTATTTGCACAGCCCACAACTCTC...GGACCTGTCAGCATGACTTCGACATGCATTCCAGGCATCTTTCGGGGAGTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp CTTTACTCTTCCTTTATAGAACAGAGGCCAAAATGCAGGAGGCAACAGGACCATCACTCCCCCGAATCGTaGAGGATTTGCTCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: LYSSFIEQRPKCRRQQDHHSPES*RICSSP
Trigger: GGGAGAAGAGCAAATCCTGCACGATTCGGGGGAGTG...ATGGTCCTGTTGCCTCCTGCATTTTGGCCTCTGTTCTATAAAGGAAGAGTAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp CTAAATAACCCACTCTCAGTTATTTCACCCAGCCACATGGGTTTTCCTGTTCTCAGACTGCTGCGGCTGTaGTTCCCTCCTGAACACAAC +
Preference number: 4 (lower is better)
Translates to: LNNPLSVISPSHMGFPVLRLLRL*FPPEHN
Trigger: GTTGTGTTCAGGAGGGAAGCACAGCCGCAGCAGTCT...GAGAACAGGAAAACCCATGTGGCTGGGTGAAATAACTGAGAGTGGGTTATTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp CTGGGGACGACACACGTCCTGGAAGTAAAATCCAAAGGGACAGATGATATGTGCTCAGCTACAAGAGACTaGTGTTTCCAGGAAGAGCTC +
Preference number: 4 (lower is better)
Translates to: LGTTHVLEVKSKGTDDMCSATRD*CFQEEL
Trigger: GAGCTCTTCCTGGAAACAGCAGTCTCTTGTAGCTGA...GCACATATCATCTGTCCCTTTGGATTTTACTTCCAGGACGTGTGTCGTCCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp TTGGAGACACTGGAAACAACTTTCGACCCTGAGTACCCACTGGCTGCCCAAATTAAACTCCCCGAAAGATaGCTGGAATGCATGTCGAAG +
Preference number: 4 (lower is better)
Translates to: LETLETTFDPEYPLAAQIKLPER*LECMSK
Trigger: CTTCGACATGCATTCCAGGCATCTTTCGGGGAGTTT...AATTTGGGCAGCCAGTGGGTACTCAGGGTCGAAAGTTGTTTCCAGTGTCTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp TATAGAACAGAGGCCAAAATGCAGGAGGCAACAGGACCATTCGCACAGTTGCAGATGCTAACTCTGAGTTaGATTCTGGGGCTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: YRTEAKMQEATGPFAQLQMLTLS*ILGLLQ
Trigger: CTGAAGCAGCCCCAGAATCCAACTCAGAGTTAGCAT...CTGCAACTGTGCGAATGGTCCTGTTGCCTCCTGCATTTTGGCCTCTGTTCTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CCA 90 bp GAGGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTCCTGTGCTGCTGATATATAACATAAGGTaGAAAGGCCCGGCTAGAGAG +
Preference number: 4 (lower is better)
Translates to: EATGPFAQLQVYNLPVLLIYNIR*KGPARE
Trigger: CTCTCTAGCCGGGCCTTTCCACCTTATGTTATATAT...CAGCAGCACAGGAAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CCA 90 bp CTTTACTCTTCCTTTATAGAACAGAGGCCAAAATGCAGGAGGCAACAGGACCATTCGCACCTGCAGAACTaGGCCCAAAATAGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: LYSSFIEQRPKCRRQQDHSHLQN*AQNRGE
Trigger: CTCCCCTCTATTTTGGGCCCAGTTCTGCAGGTGCGA...ATGGTCCTGTTGCCTCCTGCATTTTGGCCTCTGTTCTATAAAGGAAGAGTAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp GGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTCCTGTGCTGCTGAAAAAGTTAGCTGGGTGTaGTGGCACGTTCCTATATTC +
Preference number: 4 (lower is better)
Translates to: GNRTIRTVAGVQSSCAAEKVSWV*WHVPIF
Trigger: GAATATAGGAACGTGCCACCACACCCAGCTAACTTT...TTCAGCAGCACAGGAAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp TTGGAGACACTGGAAACAACTTTCGACCCTGAGTACCCACTGGCTGCCCAAATTAGAAGTCACTCAGTCTaGAACTTTAAGTCGGGCCCT +
Preference number: 4 (lower is better)
Translates to: LETLETTFDPEYPLAAQIRSHSV*NFKSGP
Trigger: AGGGCCCGACTTAAAGTTCCAGACTGAGTGACTTCT...AATTTGGGCAGCCAGTGGGTACTCAGGGTCGAAAGTTGTTTCCAGTGTCTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp AAGGGACAGATGATATGTGCTTTCGTGATGGAGGCAGGAGGAGCTCCATCTTTAACCCTGAGTACCCACTaGCTGCCCAAATTAAACAGG +
Preference number: 4 (lower is better)
Translates to: KGQMICAFVMEAGGAPSLTLSTH*LPKLNR
Trigger: CCTGTTTAATTTGGGCAGCCAGTGGGTACTCAGGGT...TAAAGATGGAGCTCCTCCTGCCTCCATCACGAAAGCACATATCATCTGTCCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp GCCAAAATGCAGGAGGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTGCTGACAGGTCCTATTaGCCGTCTTGTTACTTGTGT +
Preference number: 4 (lower is better)
Translates to: AKMQEATGPFAQLQVYNLADRSY*PSCYLC
Trigger: ACACAAGTAACAAGACGGCCAATAGGACCTGTCAGC...AAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCCTCCTGCATTTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp TTGGAGACACTGGAAACAACTTTCGACCCTGAGTACCCACTGGCTGCCCAAATTATGGACAGCCTTTTGTaGGGCCCTTTTGAAGAGACA +
Preference number: 4 (lower is better)
Translates to: LETLETTFDPEYPLAAQIMDSLL*GPFEET
Trigger: TGTCTCTTCAAAAGGGCCCCACAAAAGGCTGTCCAT...AATTTGGGCAGCCAGTGGGTACTCAGGGTCGAAAGTTGTTTCCAGTGTCTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp ATGGCTGTGGCTCTAAGTATAATCCTGCCTCTTGGAGCAGGCTGCAAAGCAGCATTTAGTCTGGTCTACTaGTTCACCCTTCAGGGAGAA +
Preference number: 4 (lower is better)
Translates to: MAVALSIILPLGAGCKAAFSLVY*FTLQGE
Trigger: TTCTCCCTGAAGGGTGAACCAGTAGACCAGACTAAA...TGCTGCTTTGCAGCCTGCTCCAAGAGGCAGGATTATACTTAGAGCCACAGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp GCCAAAATGCAGGAGGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTAGTGTGCGTTTAGTCTaGTCTACTGGTTCACCCTTC +
Preference number: 4 (lower is better)
Translates to: AKMQEATGPFAQLQVYNLSVRLV*STGSPF
Trigger: GAAGGGTGAACCAGTAGACCAGACTAAACGCACACT...AAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCCTCCTGCATTTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp CTAAATAACCCACTCTCAGTTATTTCACCCAGCCACATGGGTTTTCCTGTTCTCGCTGGTGCGACTGGGTaGCCAACATCTCATACATCT +
Preference number: 4 (lower is better)
Translates to: LNNPLSVISPSHMGFPVLAGATG*PTSHTS
Trigger: AGATGTATGAGATGTTGGTCACCCAGTCGCACCAGC...GAGAACAGGAAAACCCATGTGGCTGGGTGAAATAACTGAGAGTGGGTTATTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp GCCAAAATGCAGGAGGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTACCATCACATCATCCTaGAAGTCCGACTCTTCTATG +
Preference number: 4 (lower is better)
Translates to: AKMQEATGPFAQLQVYNLTITSS*KSDSSM
Trigger: CATAGAAGAGTCGGACTTTCAGGATGATGTGATGGT...AAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCCTCCTGCATTTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR TCA 90 bp CTTTACTCTTCCTTTATAGAACAGAGGCCAAAATGCAGGAGGCAACAGGACCATGAACAGCTGGAATTCTaGCATGGGGCACTTCCAGAC +
Preference number: 4 (lower is better)
Translates to: LYSSFIEQRPKCRRQQDHEQLEF*HGALPD
Trigger: GTCTGGAAGTGCCCCATGTCAGAATTCCAGCTGTTC...ATGGTCCTGTTGCCTCCTGCATTTTGGCCTCTGTTCTATAAAGGAAGAGTAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR TCA 90 bp GGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTCCTGTGCTGCTGAAGTGTTATTTATAGACTaGTGGCTGAAGCAACAAGGG +
Preference number: 4 (lower is better)
Translates to: GNRTIRTVAGVQSSCAAEVLFID*WLKQQG
Trigger: CCCTTGTTGCTTCAGCCATCAGTCTATAAATAACAC...TTCAGCAGCACAGGAAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp CTAAACTCCCCGAAAGATGCCTGGAATGCATGTCGAAGTCATGCTGACAGGTCCGAACAAAATTCACAGTaGCCCTACAAGCTAGGAAAG +
Preference number: 4 (lower is better)
Translates to: LNSPKDAWNACRSHADRSEQNSQ*PYKLGK
Trigger: CTTTCCTAGCTTGTAGGGTCACTGTGAATTTTGTTC...GGACCTGTCAGCATGACTTCGACATGCATTCCAGGCATCTTTCGGGGAGTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp TATCCACAGGGCAAAAAGGGGCCTTGTTACAGGTGGGCCTTTCATAGACTTGTCGCCACCAGATCTATCTaGAAGGCCATATTCTTTACC +
Preference number: 4 (lower is better)
Translates to: YPQGKKGPCYRWAFHRLVATRSI*KAIFFT
Trigger: GGTAAAGAATATGGCCTTTCAGATAGATCTGGTGGC...GACAAGTCTATGAAAGGCCCACCTGTAACAAGGCCCCTTTTTGCCCTGTGGATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp TATCCACAGGGCAAAAAGGGGCCTTGTTACAGGTGGGCCTTTCATAGACTTGTCATAGTTTCCACATGGTaGCTATTGGGGAAAAGCCAC +
Preference number: 4 (lower is better)
Translates to: YPQGKKGPCYRWAFHRLVIVSTW*LLGKSH
Trigger: GTGGCTTTTCCCCAATAGTCACCATGTGGAAACTAT...GACAAGTCTATGAAAGGCCCACCTGTAACAAGGCCCCTTTTTGCCCTGTGGATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp GGGACAGATGATATGTGCTTTCGTGATGGAGGCAGGAGGAGCTCCATCTTTACTAAGCATGGCTCTGACTaGAACCCGATGAGATATTCT +
Preference number: 4 (lower is better)
Translates to: GTDDMCFRDGGRRSSIFTKHGSD*NPMRYS
Trigger: AGAATATCTCATCGGGTTTCAGTCAGAGCCATGCTT...AGTAAAGATGGAGCTCCTCCTGCCTCCATCACGAAAGCACATATCATCTGTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp TTGGAGACACTGGAAACAACTTTCGACCCTGAGTACCCACTGGCTGCCCAAATTTTGAATGCCAGCTTCTaGAATCCTGAAAGCCAAACC +
Preference number: 4 (lower is better)
Translates to: LETLETTFDPEYPLAAQILNASF*NPESQT
Trigger: GGTTTGGCTTTCAGGATTTCAGAAGCTGGCATTCAA...AATTTGGGCAGCCAGTGGGTACTCAGGGTCGAAAGTTGTTTCCAGTGTCTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp GGGACAGATGATATGTGCTTTCGTGATGGAGGCAGGAGGAGCTCCATCTTTACTGTTCTGGCTTCTTGGTaGCTAAACCTTACAGAAAGC +
Preference number: 4 (lower is better)
Translates to: GTDDMCFRDGGRRSSIFTVLASW*LNLTES
Trigger: GCTTTCTGTAAGGTTTAGTCACCAAGAAGCCAGAAC...AGTAAAGATGGAGCTCCTCCTGCCTCCATCACGAAAGCACATATCATCTGTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp ATGGCTGTGGCTCTAAGTATAATCCTGCCTCTTGGAGCAGGCTGCAAAGCAGCATTCTTCAAGGGGTCGTaGTTCTCCAAGATTTTCACA +
Preference number: 4 (lower is better)
Translates to: MAVALSIILPLGAGCKAAFFKGS*FSKIFT
Trigger: TGTGAAAATCTTGGAGAAGCACGACCCCTTGAAGAA...TGCTGCTTTGCAGCCTGCTCCAAGAGGCAGGATTATACTTAGAGCCACAGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp TATCCACAGGGCAAAAAGGGGCCTTGTTACAGGTGGGCCTTTCATAGACTTGTCGATAGACCCATATTTTaGCTGGGTGTTCTTCAAGGG +
Preference number: 4 (lower is better)
Translates to: YPQGKKGPCYRWAFHRLVDRPIF*LGVLQG
Trigger: CCCTTGAAGAACACCCAGGCAAAATATGGGTCTATC...GACAAGTCTATGAAAGGCCCACCTGTAACAAGGCCCCTTTTTGCCCTGTGGATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp GGGACAGATGATATGTGCTTTCGTGATGGAGGCAGGAGGAGCTCCATCTTTACTGAAAAGGTCCAGATATaGAGTTGTGGTCATGACCTC +
Preference number: 4 (lower is better)
Translates to: GTDDMCFRDGGRRSSIFTEKVQI*SCGHDL
Trigger: GAGGTCATGACCACAACTGCATATCTGGACCTTTTC...AGTAAAGATGGAGCTCCTCCTGCCTCCATCACGAAAGCACATATCATCTGTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR GCA 90 bp CTTTACTCTTCCTTTATAGAACAGAGGCCAAAATGCAGGAGGCAACAGGACCATGTTGGATTCTGGGGCTaGTTCAGGTTCCCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: LYSSFIEQRPKCRRQQDHVGFWG*FRFPLL
Trigger: CAAGAGAGGGAACCTGAAGCAGCCCCAGAATCCAAC...ATGGTCCTGTTGCCTCCTGCATTTTGGCCTCTGTTCTATAAAGGAAGAGTAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR GCA 90 bp GAGGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTCCTGTGCTGCTGCTTGTTTTTCACAGATaGAAGGACCTGATAGAGAGA +
Preference number: 4 (lower is better)
Translates to: EATGPFAQLQVYNLPVLLLVFHR*KDLIER
Trigger: TCTCTCTATCAGGTCCTTGCATCTGTGAAAAACAAG...CAGCAGCACAGGAAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR GCA 90 bp CTTTACTCTTCCTTTATAGAACAGAGGCCAAAATGCAGGAGGCAACAGGACCATTTGATTTGTCCAGACTaGTGCGGCTGTGCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: LYSSFIEQRPKCRRQQDHLICPD*CGCASL
Trigger: GAGGGAAGCACAGCCGCAGCAGTCTGGACAAATCAA...ATGGTCCTGTTGCCTCCTGCATTTTGGCCTCTGTTCTATAAAGGAAGAGTAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp CAGGTGACCTGTTTGCATTTACATCCAAGGTCCCAAAGTGGGCTGTACAGTTCCAACATTTGGCTCTGCTaGAAACCCCTAGAAGAAGAC +
Preference number: 4 (lower is better)
Translates to: QVTCLHLHPRSQSGLYSSNIWLC*KPLEED
Trigger: GTCTTCTTCTAGGGGTTTCCAGCAGAGCCAAATGTT...GGAACTGTACAGCCCACTTTGGGACCTTGGATGTAAATGCAAACAGGTCACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp CTTTACTCTTCCTTTATAGAACAGAGGCCAAAATGCAGGAGGCAACAGGACCATTTCAGAATGGGTTTGTaGTGCAGCAGAGGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: LYSSFIEQRPKCRRQQDHFRMGL*CSRGWC
Trigger: GCACCAGCCTCTGCTGCACCACAAACCCATTCTGAA...ATGGTCCTGTTGCCTCCTGCATTTTGGCCTCTGTTCTATAAAGGAAGAGTAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CCA 90 bp AAAATTATCTGCATTCCAAATTCTCTCCAAGGACATCCGACTTCCCAGGCAGATCCTCCACAGTGGGGGTaGTTGTTCCTGAACAAGAGC +
Preference number: 4 (lower is better)
Translates to: KIICIPNSLQGHPTSQADPPQWG*LFLNKS
Trigger: GCTCTTGTTCAGGAACAACCACCCCCACTGTGGAGG...ATCTGCCTGGGAAGTCGGATGTCCTTGGAGAGAATTTGGAATGCAGATAATTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CCA 90 bp CTGGGGACGACACACGTCCTGGAAGTAAAATCCAAAGGGACAGATGATATGTGCCCCAGTTGCAAGTACTaGACAAAAGTAGGTGTTCTC +
Preference number: 4 (lower is better)
Translates to: LGTTHVLEVKSKGTDDMCPSCKY*TKVGVL
Trigger: GAGAACACCTACTTTTGTCCAGTACTTGCAACTGGG...GCACATATCATCTGTCCCTTTGGATTTTACTTCCAGGACGTGTGTCGTCCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CCA 90 bp CTGGGGACGACACACGTCCTGGAAGTAAAATCCAAAGGGACAGATGATATGTGCTGGACATTCTCGTGCTaGTGCAATAGGATAAAACGG +
Preference number: 4 (lower is better)
Translates to: LGTTHVLEVKSKGTDDMCWTFSC*CNRIKR
Trigger: CCGTTTTATCCTATTGCACCAGCACGAGAATGTCCA...GCACATATCATCTGTCCCTTTGGATTTTACTTCCAGGACGTGTGTCGTCCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CCA 90 bp TCTCAGTTATTTCACCCAGCCACATGGGTTTTCCTGTTCTCTCTACATCCAGCTAGAGTGTCTAGGATGTaGACATTCTCGTGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: SQLFHPATWVFLFSLHPARVSRM*TFSCWC
Trigger: GCACCAGCACGAGAATGTCCACATCCTAGACACTCT...AGCTGGATGTAGAGAGAACAGGAAAACCCATGTGGCTGGGTGAAATAACTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp CTTTACTCTTCCTTTATAGAACAGAGGCCAAAATGCAGGAGGCAACAGGACCATGAATGGGCCTGTGAATaGGGTGCTTTGAGTCCTCAC +
Preference number: 4 (lower is better)
Translates to: LYSSFIEQRPKCRRQQDHEWACE*GALSPH
Trigger: GTGAGGACTCAAAGCACCCCATTCACAGGCCCATTC...ATGGTCCTGTTGCCTCCTGCATTTTGGCCTCTGTTCTATAAAGGAAGAGTAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CCA 90 bp AAAATTATCTGCATTCCAAATTCTCTCCAAGGACATCCGACTTCCCAGGCAGATGAGAGAGCGGACGCTTaGCTGGAAGACCATGTTGGT +
Preference number: 4 (lower is better)
Translates to: KIICIPNSLQGHPTSQADERADA*LEDHVG
Trigger: ACCAACATGGTCTTCCAGCCAAGCGTCCGCTCTCTC...ATCTGCCTGGGAAGTCGGATGTCCTTGGAGAGAATTTGGAATGCAGATAATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CCA 90 bp AAGGGACAGATGATATGTGCTTTCGTGATGGAGGCAGGAGGAGCTCCATCTTTATGGAAGCCTCCTGAATaGGATCTTTGGTTAGTGCTG +
Preference number: 4 (lower is better)
Translates to: KGQMICAFVMEAGGAPSLWKPPE*DLWLVL
Trigger: CAGCACTAACCAAAGATCCCATTCAGGAGGCTTCCA...TAAAGATGGAGCTCCTCCTGCCTCCATCACGAAAGCACATATCATCTGTCCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CCA 90 bp CTAAACTCCCCGAAAGATGCCTGGAATGCATGTCGAAGTCATGCTGACAGGTCCTCTAATGGAGAGTTGTaGGCTGTGCAAATACAACCA +
Preference number: 4 (lower is better)
Translates to: LNSPKDAWNACRSHADRSSNGEL*AVQIQP
Trigger: TGGTTGTATTTGCACAGCCCACAACTCTCCATTAGA...GGACCTGTCAGCATGACTTCGACATGCATTCCAGGCATCTTTCGGGGAGTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp TCGGAAGGCAGCATTTCCATGCAGAGTGAGTCGCCAGCAGGCACTTGGCTTTGCAGCACTCCCATTTCATaGTTGGGAAATTGTATTTTA +
Preference number: 4 (lower is better)
Translates to: SEGSISMQSESPAGTWLCSTPIS*LGNCIL
Trigger: TAAAATACAATTTCCCAACCATGAAATGGGAGTGCT...GCAAAGCCAAGTGCCTGCTGGCGACTCACTCTGCATGGAAATGCTGCCTTCCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp AGACAAACCTTCCAATTTCCTTCCAAACAGGCAGGCTCAAGCTCGTTACTTGCTGGGCCTTGTTACAGGTaGGCCTTTCATAGACTTGTC +
Preference number: 4 (lower is better)
Translates to: RQTFQFPSKQAGSSSLLAGPCYR*AFHRLV
Trigger: GACAAGTCTATGAAAGGCCCACCTGTAACAAGGCCC...AGCAAGTAACGAGCTTGAGCCTGCCTGTTTGGAAGGAAATTGGAAGGTTTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp AAAATTATCTGCATTCCAAATTCTCTCCAAGGACATCCGACTTCCCAGGCAGATGGGGGTGGTTGTTCCTaGACAAGAGCTCAGCAACAT +
Preference number: 4 (lower is better)
Translates to: KIICIPNSLQGHPTSQADGGGCS*TRAQQH
Trigger: ATGTTGCTGAGCTCTTGTTCAGGAACAACCACCCCC...ATCTGCCTGGGAAGTCGGATGTCCTTGGAGAGAATTTGGAATGCAGATAATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR TCA 90 bp TCTCTAACTGGCTATTCCAGCACTCCCATTTCATGGTTGGGAAATTGTATTTTAGCCCACGTCAGCCCCTaGGGAGATTCCAGTGTCATA +
Preference number: 4 (lower is better)
Translates to: SLTGYSSTPISWLGNCILAHVSP*GDSSVI
Trigger: TATGACACTGGAATCTCCTCAGGGGCTGACGTGGGC...TAAAATACAATTTCCCAACCATGAAATGGGAGTGCTGGAATAGCCAGTTAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp AGACAAACCTTCCAATTTCCTTCCAAACAGGCAGGCTCAAGCTCGTTACTTGCTCATGTTCTCCAGCTTTaGCAGGACTACGCTGATGAA +
Preference number: 4 (lower is better)
Translates to: RQTFQFPSKQAGSSSLLAHVLQL*QDYADE
Trigger: TTCATCAGCGTAGTCCTGTCAAAGCTGGAGAACATG...AGCAAGTAACGAGCTTGAGCCTGCCTGTTTGGAAGGAAATTGGAAGGTTTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp AAACAGACCTGGGAATCAGTCCACATGACGGCCACAGCCAAGCTGATTTGGAGAGGCGTTGGCATTTTATaGCTTTGTAAGTCCAAACAA +
Preference number: 4 (lower is better)
Translates to: KQTWESVHMTATAKLIWRGVGIL*LCKSKQ
Trigger: TTGTTTGGACTTACAAAGTCATAAAATGCCAACGCC...TCTCCAAATCAGCTTGGCTGTGGCCGTCATGTGGACTGATTCCCAGGTCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp CTAAACTCCCCGAAAGATGCCTGGAATGCATGTCGAAGTCATGCTGACAGGTCCTGTTTATCCAGTTATTaGGCTGCCAGGATAATCTGT +
Preference number: 4 (lower is better)
Translates to: LNSPKDAWNACRSHADRSCLSSY*AARIIC
Trigger: ACAGATTATCCTGGCAGCTCAATAACTGGATAAACA...GGACCTGTCAGCATGACTTCGACATGCATTCCAGGCATCTTTCGGGGAGTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp AGACAAACCTTCCAATTTCCTTCCAAACAGGCAGGCTCAAGCTCGTTACTTGCTAATCCTTGGAGGCCTTaGTTTGAAGCTGTGAACCTG +
Preference number: 4 (lower is better)
Translates to: RQTFQFPSKQAGSSSLLANPWRP*FEAVNL
Trigger: CAGGTTCACAGCTTCAAATCAAGGCCTCCAAGGATT...AGCAAGTAACGAGCTTGAGCCTGCCTGTTTGGAAGGAAATTGGAAGGTTTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp CTGGGGACGACACACGTCCTGGAAGTAAAATCCAAAGGGACAGATGATATGTGCTTCTTCAAGGGGTCGTaGTTCTCCAAGATTTTCACA +
Preference number: 4 (lower is better)
Translates to: LGTTHVLEVKSKGTDDMCFFKGS*FSKIFT
Trigger: TGTGAAAATCTTGGAGAAGCACGACCCCTTGAAGAA...GCACATATCATCTGTCCCTTTGGATTTTACTTCCAGGACGTGTGTCGTCCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR GCA 90 bp TTGGAGACACTGGAAACAACTTTCGACCCTGAGTACCCACTGGCTGCCCAAATTTCAGCATCATGTGATTaGAGGGGATCAGATACCTTA +
Preference number: 4 (lower is better)
Translates to: LETLETTFDPEYPLAAQISASCD*RGSDTL
Trigger: TAAGGTATCTGATCCCCTGCAATCACATGATGCTGA...AATTTGGGCAGCCAGTGGGTACTCAGGGTCGAAAGTTGTTTCCAGTGTCTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp AAAATTATCTGCATTCCAAATTCTCTCCAAGGACATCCGACTTCCCAGGCAGATTCAGGTTCCCTCTCTTaGTTTGGCTCCTTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: KIICIPNSLQGHPTSQADSGSLS*FGSLGS
Trigger: TGAGCCCAAGGAGCCAAAGCAAGAGAGGGAACCTGA...ATCTGCCTGGGAAGTCGGATGTCCTTGGAGAGAATTTGGAATGCAGATAATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR GCA 90 bp AAAATTATCTGCATTCCAAATTCTCTCCAAGGACATCCGACTTCCCAGGCAGATGTTGGATTCTGGGGCTaGTTCAGGTTCCCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: KIICIPNSLQGHPTSQADVGFWG*FRFPLL
Trigger: CAAGAGAGGGAACCTGAAGCAGCCCCAGAATCCAAC...ATCTGCCTGGGAAGTCGGATGTCCTTGGAGAGAATTTGGAATGCAGATAATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR GCA 90 bp TGTAGGAGCCTGTCACATAGAGAAGTGTCCACACTCTCGGACCATATCTTTAAGCATCCAAAAGGTTCTTaGCACTTCCTGTCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: CRSLSHREVSTLSDHIFKHPKGS*HFLSWK
Trigger: CTTCCAGGACAGGAAGTGGCAAGAACCTTTTGGATG...CTTAAAGATATGGTCCGAGAGTGTGGACACTTCTCTATGTGACAGGCTCCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp CTAAATAACCCACTCTCAGTTATTTCACCCAGCCACATGGGTTTTCCTGTTCTCGAACAGAGGCCAAAATaGAGGAGGCAACAGGACCAT +
Preference number: 4 (lower is better)
Translates to: LNNPLSVISPSHMGFPVLEQRPK*RRQQDH
Trigger: ATGGTCCTGTTGCCTCCTGCATTTTGGCCTCTGTTC...GAGAACAGGAAAACCCATGTGGCTGGGTGAAATAACTGAGAGTGGGTTATTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp CTTTACTCTTCCTTTATAGAACAGAGGCCAAAATGCAGGAGGCAACAGGACCATGAACAGAGGCCAAAATaGAGGAGGCAACAGGACCAT +
Preference number: 4 (lower is better)
Translates to: LYSSFIEQRPKCRRQQDHEQRPK*RRQQDH
Trigger: ATGGTCCTGTTGCCTCCTGCATTTTGGCCTCTGTTC...ATGGTCCTGTTGCCTCCTGCATTTTGGCCTCTGTTCTATAAAGGAAGAGTAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR GCA 90 bp AAACAGACCTGGGAATCAGTCCACATGACGGCCACAGCCAAGCTGATTTGGAGAGAATCTTTGGTGTCTTaGTTGGACTATGAAACACGA +
Preference number: 4 (lower is better)
Translates to: KQTWESVHMTATAKLIWRESLVS*LDYETR
Trigger: TCGTGTTTCATAGTCCAAGCAAGACACCAAAGATTC...TCTCCAAATCAGCTTGGCTGTGGCCGTCATGTGGACTGATTCCCAGGTCTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp TGGCCTCGAAGTTTCGGAAAGTACACACCCTCCTTCAGCTTGGAGTTGGTTAGTAGAAAGGTAACCAGTTaGGTGGTTCATTTTGGACAG +
Preference number: 4 (lower is better)
Translates to: WPRSFGKYTPSFSLELVSRKVTS*VVHFGQ
Trigger: CTGTCCAAAATGAACCACGCAACTGGTTACCTTTCT...ACTAACCAACTCCAAGCTGAAGGAGGGTGTGTACTTTCCGAAACTTCGAGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp TCTCAGTTATTTCACCCAGCCACATGGGTTTTCCTGTTCTCTCTACATCCAGCTCAATTCAGCGACTCATaGTTCCTGGCTTGCACAGTT +
Preference number: 4 (lower is better)
Translates to: SQLFHPATWVFLFSLHPAQFSDS*FLACTV
Trigger: AACTGTGCAAGCCAGGAAGCATGAGTCGCTGAATTG...AGCTGGATGTAGAGAGAACAGGAAAACCCATGTGGCTGGGTGAAATAACTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp TATAGAACAGAGGCCAAAATGCAGGAGGCAACAGGACCATTCGCACAGTTGCAGAGCAGGAGCCAAGACTaGTACCAAAAATCCATTGTA +
Preference number: 4 (lower is better)
Translates to: YRTEAKMQEATGPFAQLQSRSQD*YQKSIV
Trigger: TACAATGGATTTTTGGTACCAGTCTTGGCTCCTGCT...CTGCAACTGTGCGAATGGTCCTGTTGCCTCCTGCATTTTGGCCTCTGTTCTATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CCA 90 bp CAGGTGACCTGTTTGCATTTACATCCAAGGTCCCAAAGTGGGCTGTACAGTTCCCTTTGGTGTCTTGCTTaGACTATGAAACACGAAAGC +
Preference number: 4 (lower is better)
Translates to: QVTCLHLHPRSQSGLYSSLWCLA*TMKHES
Trigger: GCTTTCGTGTTTCATAGTCCAAGCAAGACACCAAAG...GGAACTGTACAGCCCACTTTGGGACCTTGGATGTAAATGCAAACAGGTCACCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp TGGCCTCGAAGTTTCGGAAAGTACACACCCTCCTTCAGCTTGGAGTTGGTTAGTCCACAAAGGGGACCATaGTATTCTACAATGCAGAAA +
Preference number: 4 (lower is better)
Translates to: WPRSFGKYTPSFSLELVSPQRGP*YSTMQK
Trigger: TTTCTGCATTGTAGAATACCATGGTCCCCTTTGTGG...ACTAACCAACTCCAAGCTGAAGGAGGGTGTGTACTTTCCGAAACTTCGAGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp TGTAGGAGCCTGTCACATAGAGAAGTGTCCACACTCTCGGACCATATCTTTAAGAACCTCAAACAGACCTaGGAATCAGTCCACATGACG +
Preference number: 4 (lower is better)
Translates to: CRSLSHREVSTLSDHIFKNLKQT*ESVHMT
Trigger: CGTCATGTGGACTGATTCCCAGGTCTGTTTGAGGTT...CTTAAAGATATGGTCCGAGAGTGTGGACACTTCTCTATGTGACAGGCTCCTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp GGGACAGATGATATGTGCTTTCGTGATGGAGGCAGGAGGAGCTCCATCTTTACTGACTTAAAGCTGATGTaGCATCAGCTACAAGAGACT +
Preference number: 4 (lower is better)
Translates to: GTDDMCFRDGGRRSSIFTDLKLM*HQLQET
Trigger: AGTCTCTTGTAGCTGATGCCACATCAGCTTTAAGTC...AGTAAAGATGGAGCTCCTCCTGCCTCCATCACGAAAGCACATATCATCTGTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp TCTCAGTTATTTCACCCAGCCACATGGGTTTTCCTGTTCTCTCTACATCCAGCTTCCCCGAAAGATGCCTaGAATGCATGTCGAAGTCAT +
Preference number: 4 (lower is better)
Translates to: SQLFHPATWVFLFSLHPASPKDA*NACRSH
Trigger: ATGACTTCGACATGCATTCCAGGCATCTTTCGGGGA...AGCTGGATGTAGAGAGAACAGGAAAACCCATGTGGCTGGGTGAAATAACTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp AAAATTATCTGCATTCCAAATTCTCTCCAAGGACATCCGACTTCCCAGGCAGATAAAGCAGCATGGAAGTaGCTGCCATGCCTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: KIICIPNSLQGHPTSQADKAAWK*LPCLFS
Trigger: GCTGAAGAGGCATGGCAGCCACTTCCATGCTGCTTT...ATCTGCCTGGGAAGTCGGATGTCCTTGGAGAGAATTTGGAATGCAGATAATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp CTAAATAACCCACTCTCAGTTATTTCACCCAGCCACATGGGTTTTCCTGTTCTCTCCTGTCTTTCAAGGTaGAGGCCTAGGCCTAGGAAA +
Preference number: 4 (lower is better)
Translates to: LNNPLSVISPSHMGFPVLSCLSR*RPRPRK
Trigger: TTTCCTAGGCCTAGGCCTCCACCTTGAAAGACAGGA...GAGAACAGGAAAACCCATGTGGCTGGGTGAAATAACTGAGAGTGGGTTATTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp GAAATTCGCAAAGATGGCTCTGCTTATAAAGGGGCCTCAGTGAAATACAATTTTGGTACTGCAGGTAGCTaGTGTCCAGGGCTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: EIRKDGSAYKGASVKYNFGTAGS*CPGLSH
Trigger: ATGGGAAAGCCCTGGACATCAGCTACCTGCAGTACC...AAAATTGTATTTCACTGAGGCCCCTTTATAAGCAGAGCCATCTTTGCGAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp GCTTTGCATTTAACATTCAGTCAAGACACTAAAACCTTACAAAACAAGAACCTCGGTCATACTGGGCAATaGGCTCCTCGCTCTCCGGGT +
Preference number: 4 (lower is better)
Translates to: ALHLTFSQDTKTLQNKNLGHTGQ*APRSPG
Trigger: ACCCGGAGAGCGAGGAGCTCATTGCCCAGTATGACC...GAGGTTCTTGTTTTGTAAGGTTTTAGTGTCTTGACTGAATGTTAAATGCAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR TCA 90 bp GGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTCCTGTGCTGCTGAAGGAGCAACCAGCTTATaGGACTTACATTCTATATAT +
Preference number: 4 (lower is better)
Translates to: GNRTIRTVAGVQSSCAAEGATSL*DLHSIY
Trigger: ATATATAGAATGTAAGTCTCATAAGCTGGTTGCTCC...TTCAGCAGCACAGGAAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR TCA 90 bp AAAATTATCTGCATTCCAAATTCTCTCCAAGGACATCCGACTTCCCAGGCAGATTTGCAGGGCTCCAGGTaGCCTGTTTGCATTTACATC +
Preference number: 4 (lower is better)
Translates to: KIICIPNSLQGHPTSQADLQGSR*PVCIYI
Trigger: GATGTAAATGCAAACAGGTCACCTGGAGCCCTGCAA...ATCTGCCTGGGAAGTCGGATGTCCTTGGAGAGAATTTGGAATGCAGATAATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp GCCAAAATGCAGGAGGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTAACAGAAATGTACAGTaGGTAGGAATCTTTGGTGTC +
Preference number: 4 (lower is better)
Translates to: AKMQEATGPFAQLQVYNLNRNVQ*VGIFGV
Trigger: GACACCAAAGATTCCTACTCACTGTACATTTCTGTT...AAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCCTCCTGCATTTTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp TTTAGTCTGGTCTACTGGTTCACCCTTCAGGGAGAAATCTCATTAAAATGTATGCGGCCACAGCCAAGCTaGTTTGGAGACACTGGAAAC +
Preference number: 4 (lower is better)
Translates to: FSLVYWFTLQGEISLKCMRPQPS*FGDTGN
Trigger: GTTTCCAGTGTCTCCAAATCAGCTTGGCTGTGGCCG...CATACATTTTAATGAGATTTCTCCCTGAAGGGTGAACCAGTAGACCAGACTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp CTAAATAACCCACTCTCAGTTATTTCACCCAGCCACATGGGTTTTCCTGTTCTCGCAGCCTCCGTTCCATaGAATTTAATCTGGCCTAAG +
Preference number: 4 (lower is better)
Translates to: LNNPLSVISPSHMGFPVLAASVP*NLIWPK
Trigger: CTTAGGCCAGATTAAATTTCATGGAACGGAGGCTGC...GAGAACAGGAAAACCCATGTGGCTGGGTGAAATAACTGAGAGTGGGTTATTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp ATGGCTGTGGCTCTAAGTATAATCCTGCCTCTTGGAGCAGGCTGCAAAGCAGCAGGGTCTAAAGTAACATaGTTTTCACCAAATCTCTCT +
Preference number: 4 (lower is better)
Translates to: MAVALSIILPLGAGCKAAGSKVT*FSPNLS
Trigger: AGAGAGATTTGGTGAAAATCATGTTACTTTAGACCC...TGCTGCTTTGCAGCCTGCTCCAAGAGGCAGGATTATACTTAGAGCCACAGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp CTTTACTCTTCCTTTATAGAACAGAGGCCAAAATGCAGGAGGCAACAGGACCATAAAACATTCCCGTTGTaGACACTGCTCCAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: LYSSFIEQRPKCRRQQDHKTFPL*TLLQKQ
Trigger: CTGCTTCTGGAGCAGTGTTCACAACGGGAATGTTTT...ATGGTCCTGTTGCCTCCTGCATTTTGGCCTCTGTTCTATAAAGGAAGAGTAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp CTAAATAACCCACTCTCAGTTATTTCACCCAGCCACATGGGTTTTCCTGTTCTCCTTGATTTGAAGCTGTaGACCTGTAGCCTACCAAGG +
Preference number: 4 (lower is better)
Translates to: LNNPLSVISPSHMGFPVLLDLKL*TCSLPR
Trigger: CCTTGGTAGGCTACAGGTTCACAGCTTCAAATCAAG...GAGAACAGGAAAACCCATGTGGCTGGGTGAAATAACTGAGAGTGGGTTATTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp CTAAACTCCCCGAAAGATGCCTGGAATGCATGTCGAAGTCATGCTGACAGGTCCGATTTTCACAACCTGTaGCCAGTGGTTTTTAAATAC +
Preference number: 4 (lower is better)
Translates to: LNSPKDAWNACRSHADRSDFHNL*PVVFKY
Trigger: GTATTTAAAAACCACTGGGCACAGGTTGTGAAAATC...GGACCTGTCAGCATGACTTCGACATGCATTCCAGGCATCTTTCGGGGAGTTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp TCTCTAACTGGCTATTCCAGCACTCCCATTTCATGGTTGGGAAATTGTATTTTAAATGCATCCCGAGCTTaGTGGCCTACTGACCCCTCT +
Preference number: 4 (lower is better)
Translates to: SLTGYSSTPISWLGNCILNASRA*WPTDPS
Trigger: AGAGGGGTCAGTAGGCCAGCAAGCTCGGGATGCATT...TAAAATACAATTTCCCAACCATGAAATGGGAGTGCTGGAATAGCCAGTTAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp AGACAAACCTTCCAATTTCCTTCCAAACAGGCAGGCTCAAGCTCGTTACTTGCTACATTCTCGTGCTGGTaGAATAGGATAAAACGGAGG +
Preference number: 4 (lower is better)
Translates to: RQTFQFPSKQAGSSSLLATFSCW*NRIKRR
Trigger: CCTCCGTTTTATCCTATTGCACCAGCACGAGAATGT...AGCAAGTAACGAGCTTGAGCCTGCCTGTTTGGAAGGAAATTGGAAGGTTTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp GCTTTGCATTTAACATTCAGTCAAGACACTAAAACCTTACAAAACAAGAACCTCGTTAGAGCTGTGCTCTaGCTCAGGGGCAGGGGATGC +
Preference number: 4 (lower is better)
Translates to: ALHLTFSQDTKTLQNKNLVRAVL*LRGRGC
Trigger: GCATCCCCTGCCCCTGAGGCAGAGCACAGCTCTAAC...GAGGTTCTTGTTTTGTAAGGTTTTAGTGTCTTGACTGAATGTTAAATGCAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR GCA 90 bp GCCAAAATGCAGGAGGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTCTTGTTTTTCACAGATaGAAGGACCTGATAGAGAGA +
Preference number: 4 (lower is better)
Translates to: AKMQEATGPFAQLQVYNLLVFHR*KDLIER
Trigger: TCTCTCTATCAGGTCCTTGCATCTGTGAAAAACAAG...AAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCCTCCTGCATTTTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR GCA 90 bp CTAAATAACCCACTCTCAGTTATTTCACCCAGCCACATGGGTTTTCCTGTTCTCGACCATTCGCACAGTTaGAGGTGTACAATCTTCCTG +
Preference number: 4 (lower is better)
Translates to: LNNPLSVISPSHMGFPVLDHSHS*RCTIFL
Trigger: CAGGAAGATTGTACACCTGCAACTGTGCGAATGGTC...GAGAACAGGAAAACCCATGTGGCTGGGTGAAATAACTGAGAGTGGGTTATTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp CTAAATAACCCACTCTCAGTTATTTCACCCAGCCACATGGGTTTTCCTGTTCTCGAATCGTGCAGGATTTaGTCTTCTCCCGTGGATAGA +
Preference number: 4 (lower is better)
Translates to: LNNPLSVISPSHMGFPVLESCRI*SSPVDR
Trigger: TCTATCCACGGGAGAAGAGCAAATCCTGCACGATTC...GAGAACAGGAAAACCCATGTGGCTGGGTGAAATAACTGAGAGTGGGTTATTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp ATGGCTGTGGCTCTAAGTATAATCCTGCCTCTTGGAGCAGGCTGCAAAGCAGCAATATTTCTAAGGGCTTaGCGATTTACTTTAGGACCA +
Preference number: 4 (lower is better)
Translates to: MAVALSIILPLGAGCKAAIFLRA*RFTLGP
Trigger: TGGTCCTAAAGTAAATCGGCAAGCCCTTAGAAATAT...TGCTGCTTTGCAGCCTGCTCCAAGAGGCAGGATTATACTTAGAGCCACAGCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp ATGGCTGTGGCTCTAAGTATAATCCTGCCTCTTGGAGCAGGCTGCAAAGCAGCAACAACCTGTGCCCAGTaGTTTTTAAATACAATCATG +
Preference number: 4 (lower is better)
Translates to: MAVALSIILPLGAGCKAATTCAQ*FLNTIM
Trigger: CATGATTGTATTTAAAAACCACTGGGCACAGGTTGT...TGCTGCTTTGCAGCCTGCTCCAAGAGGCAGGATTATACTTAGAGCCACAGCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp TATAGAACAGAGGCCAAAATGCAGGAGGCAACAGGACCATTCGCACAGTTGCAGAGCTCTTTAATGATTTaGTCATACTGGGCAATGAGC +
Preference number: 4 (lower is better)
Translates to: YRTEAKMQEATGPFAQLQSSLMI*SYWAMS
Trigger: GCTCATTGCCCAGTATGACCAAATCATTAAAGAGCT...CTGCAACTGTGCGAATGGTCCTGTTGCCTCCTGCATTTTGGCCTCTGTTCTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CCA 90 bp AAAATTATCTGCATTCCAAATTCTCTCCAAGGACATCCGACTTCCCAGGCAGATCCTGAATGGGATCTTTaGTTAGTGCTGCAGGGGTCA +
Preference number: 4 (lower is better)
Translates to: KIICIPNSLQGHPTSQADPEWDL*LVLQGS
Trigger: TGACCCCTGCAGCACTAACCAAAGATCCCATTCAGG...ATCTGCCTGGGAAGTCGGATGTCCTTGGAGAGAATTTGGAATGCAGATAATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CCA 90 bp CTAAATAACCCACTCTCAGTTATTTCACCCAGCCACATGGGTTTTCCTGTTCTCTGGAAGCCTCCTGAATaGGATCTTTGGTTAGTGCTG +
Preference number: 4 (lower is better)
Translates to: LNNPLSVISPSHMGFPVLWKPPE*DLWLVL
Trigger: CAGCACTAACCAAAGATCCCATTCAGGAGGCTTCCA...GAGAACAGGAAAACCCATGTGGCTGGGTGAAATAACTGAGAGTGGGTTATTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp ATCCACAGGGCAAAAAGGGGCCTTGTTACAGGTGGGCCTTTCATAGACTTGTCCTTCCATTTACAGATGTaGCGTTGGCATTTTATGACT +
Preference number: 4 (lower is better)
Translates to: IHRAKRGLVTGGPFIDLSFHLQM*RWHFMT
Trigger: AGTCATAAAATGCCAACGCCACATCTGTAAATGGAA...GGACAAGTCTATGAAAGGCCCACCTGTAACAAGGCCCCTTTTTGCCCTGTGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp AAAATTATCTGCATTCCAAATTCTCTCCAAGGACATCCGACTTCCCAGGCAGATACTGTGAAACGGGTCTaGATTGTCCCTATTCCACTC +
Preference number: 4 (lower is better)
Translates to: KIICIPNSLQGHPTSQADTVKRV*IVPIPL
Trigger: GAGTGGAATAGGGACAATTCAGACCCGTTTCACAGT...ATCTGCCTGGGAAGTCGGATGTCCTTGGAGAGAATTTGGAATGCAGATAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR TCA 90 bp GCTTTGCATTTAACATTCAGTCAAGACACTAAAACCTTACAAAACAAGAACCTCGTGAATGGGGTGCTTTaGGTCCTCACGGGATGGCGA +
Preference number: 4 (lower is better)
Translates to: ALHLTFSQDTKTLQNKNLVNGVL*VLTGWR
Trigger: TCGCCATCCCGTGAGGACTCAAAGCACCCCATTCAC...GAGGTTCTTGTTTTGTAAGGTTTTAGTGTCTTGACTGAATGTTAAATGCAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR TCA 90 bp GCTTTGCATTTAACATTCAGTCAAGACACTAAAACCTTACAAAACAAGAACCTCTGGGTCAGGAAGGGCTaGAGCACTCTTGGAGGTCCA +
Preference number: 4 (lower is better)
Translates to: ALHLTFSQDTKTLQNKNLWVRKG*STLGGP
Trigger: TGGACCTCCAAGAGTGCTTCAGCCCTTCCTGACCCA...GAGGTTCTTGTTTTGTAAGGTTTTAGTGTCTTGACTGAATGTTAAATGCAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR TCA 90 bp CTTTACTCTTCCTTTATAGAACAGAGGCCAAAATGCAGGAGGCAACAGGACCATAATATCTGCTTGACGTaGTCTGAGCTGCAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: LYSSFIEQRPKCRRQQDHNICLT*SELQEE
Trigger: CTCTTCTTGCAGCTCAGATCACGTCAAGCAGATATT...ATGGTCCTGTTGCCTCCTGCATTTTGGCCTCTGTTCTATAAAGGAAGAGTAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR TCA 90 bp TCTCAGTTATTTCACCCAGCCACATGGGTTTTCCTGTTCTCTCTACATCCAGCTTCGGGCCCTGAATTATaGATTGAGGTTAATGTTGTG +
Preference number: 4 (lower is better)
Translates to: SQLFHPATWVFLFSLHPASGPEL*IEVNVV
Trigger: CACAACATTAACCTCAATTCATAATTCAGGGCCCGA...AGCTGGATGTAGAGAGAACAGGAAAACCCATGTGGCTGGGTGAAATAACTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp GAAATTCGCAAAGATGGCTCTGCTTATAAAGGGGCCTCAGTGAAATACAATTTTAAGAGGATGCTTTCCTaGCAAGACCCTGGCTCCATG +
Preference number: 4 (lower is better)
Translates to: EIRKDGSAYKGASVKYNFKRMLS*QDPGSM
Trigger: CATGGAGCCAGGGTCTTGTCAGGAAAGCATCCTCTT...AAAATTGTATTTCACTGAGGCCCCTTTATAAGCAGAGCCATCTTTGCGAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp TGGCCTCGAAGTTTCGGAAAGTACACACCCTCCTTCAGCTTGGAGTTGGTTAGTACCTTTGTTGGGTTCTaGAATGACACAGTAAATCTA +
Preference number: 4 (lower is better)
Translates to: WPRSFGKYTPSFSLELVSTFVGF*NDTVNL
Trigger: TAGATTTACTGTGTCATTTCAGAACCCAACAAAGGT...ACTAACCAACTCCAAGCTGAAGGAGGGTGTGTACTTTCCGAAACTTCGAGGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp CTTTACTCTTCCTTTATAGAACAGAGGCCAAAATGCAGGAGGCAACAGGACCATGAGGTGGGAAGCATCTaGTTGAAACCCTTAGTCAAA +
Preference number: 4 (lower is better)
Translates to: LYSSFIEQRPKCRRQQDHEVGSI*LKPLVK
Trigger: TTTGACTAAGGGTTTCAATCAGATGCTTCCCACCTC...ATGGTCCTGTTGCCTCCTGCATTTTGGCCTCTGTTCTATAAAGGAAGAGTAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp AGACAAACCTTCCAATTTCCTTCCAAACAGGCAGGCTCAAGCTCGTTACTTGCTCACAGCTTATGGCCATaGCCCGCTATTTTATATTGT +
Preference number: 4 (lower is better)
Translates to: RQTFQFPSKQAGSSSLLAHSLWP*PAILYC
Trigger: ACAATATAAAATAGCGGGTCATGGCCATAAGCTGTG...AGCAAGTAACGAGCTTGAGCCTGCCTGTTTGGAAGGAAATTGGAAGGTTTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp TACAATTTTACATTCTTGCATGAGTGTGCGTTTAGTCTGGTCTACTGGTTCACCTTTGTGGGGCCCTTTTaGAGAGACACTGGTGATACC +
Preference number: 4 (lower is better)
Translates to: YNFTFLHECAFSLVYWFTFVGPF*RDTGDT
Trigger: GGTATCACCAGTGTCTCTTCAAAAGGGCCCCACAAA...GGTGAACCAGTAGACCAGACTAAACGCACACTCATGCAAGAATGTAAAATTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp CTGGGGACGACACACGTCCTGGAAGTAAAATCCAAAGGGACAGATGATATGTGCGATTTTCACAACCTGTaGCCAGTGGTTTTTAAATAC +
Preference number: 4 (lower is better)
Translates to: LGTTHVLEVKSKGTDDMCDFHNL*PVVFKY
Trigger: GTATTTAAAAACCACTGGGCACAGGTTGTGAAAATC...GCACATATCATCTGTCCCTTTGGATTTTACTTCCAGGACGTGTGTCGTCCCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR GCA 90 bp CTTTACTCTTCCTTTATAGAACAGAGGCCAAAATGCAGGAGGCAACAGGACCATACCACTGAGCCCAGTTaGAAGTACTGGACAAAAGTA +
Preference number: 4 (lower is better)
Translates to: LYSSFIEQRPKCRRQQDHTTEPS*KYWTKV
Trigger: TACTTTTGTCCAGTACTTGCAACTGGGCTCAGTGGT...ATGGTCCTGTTGCCTCCTGCATTTTGGCCTCTGTTCTATAAAGGAAGAGTAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR GCA 90 bp AAAATTATCTGCATTCCAAATTCTCTCCAAGGACATCCGACTTCCCAGGCAGATTCTTTCAGAAGGCAGTaGCATTCCTCGCCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: KIICIPNSLQGHPTSQADSFRRQ*HSSPFS
Trigger: AGAGAAAGGCGAGGAATGGCACTGCCTTCTGAAAGA...ATCTGCCTGGGAAGTCGGATGTCCTTGGAGAGAATTTGGAATGCAGATAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR GCA 90 bp TACAATTTTACATTCTTGCATGAGTGTGCGTTTAGTCTGGTCTACTGGTTCACCCTCAAGCTCGTTACTTaGTTCGCACCTGCAGAACTG +
Preference number: 4 (lower is better)
Translates to: YNFTFLHECAFSLVYWFTLKLVT*FAPAEL
Trigger: CAGTTCTGCAGGTGCGAAGCAAGTAACGAGCTTGAG...GGTGAACCAGTAGACCAGACTAAACGCACACTCATGCAAGAATGTAAAATTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp CAGGTGACCTGTTTGCATTTACATCCAAGGTCCCAAAGTGGGCTGTACAGTTCCATAGACTCAGTTCTCTaGTGTTTTTCTTTGGCATGT +
Preference number: 4 (lower is better)
Translates to: QVTCLHLHPRSQSGLYSSIDSVL*CFSLAC
Trigger: ACATGCCAAAGAAAAACAGCAGAGAACTGAGTCTAT...GGAACTGTACAGCCCACTTTGGGACCTTGGATGTAAATGCAAACAGGTCACCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp TCTCTAACTGGCTATTCCAGCACTCCCATTTCATGGTTGGGAAATTGTATTTTAAGGAAGAGCTCACACTaGAAAGCAGGCTGCCGTTTG +
Preference number: 4 (lower is better)
Translates to: SLTGYSSTPISWLGNCILRKSSH*KAGCRL
Trigger: CAAACGGCAGCCTGCTTTGCAGTGTGAGCTCTTCCT...TAAAATACAATTTCCCAACCATGAAATGGGAGTGCTGGAATAGCCAGTTAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp ATGGCTGTGGCTCTAAGTATAATCCTGCCTCTTGGAGCAGGCTGCAAAGCAGCAAGAAGAGTTCTAAAATaGATGGATCTTTGGCAAGAA +
Preference number: 4 (lower is better)
Translates to: MAVALSIILPLGAGCKAARRVLK*MDLWQE
Trigger: TTCTTGCCAAAGATCCATCCATTTTAGAACTCTTCT...TGCTGCTTTGCAGCCTGCTCCAAGAGGCAGGATTATACTTAGAGCCACAGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp GGGACAGATGATATGTGCTTTCGTGATGGAGGCAGGAGGAGCTCCATCTTTACTTGGTCTTCACTAGTGTaGAAGAAGAGTTCTAAAATG +
Preference number: 4 (lower is better)
Translates to: GTDDMCFRDGGRRSSIFTWSSLV*KKSSKM
Trigger: CATTTTAGAACTCTTCTTCCACACTAGTGAAGACCA...AGTAAAGATGGAGCTCCTCCTGCCTCCATCACGAAAGCACATATCATCTGTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CCA 90 bp AAAATTATCTGCATTCCAAATTCTCTCCAAGGACATCCGACTTCCCAGGCAGATGCAAGGGATCAGGTGTaGGGTAATTCTGTTCCATCA +
Preference number: 4 (lower is better)
Translates to: KIICIPNSLQGHPTSQADARDQV*GNSVPS
Trigger: TGATGGAACAGAATTACCCCACACCTGATCCCTTGC...ATCTGCCTGGGAAGTCGGATGTCCTTGGAGAGAATTTGGAATGCAGATAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CCA 90 bp AGACAAACCTTCCAATTTCCTTCCAAACAGGCAGGCTCAAGCTCGTTACTTGCTATATATAACATAAGGTaGAAAGGCCCGGCTAGAGAG +
Preference number: 4 (lower is better)
Translates to: RQTFQFPSKQAGSSSLLAIYNIR*KGPARE
Trigger: CTCTCTAGCCGGGCCTTTCCACCTTATGTTATATAT...AGCAAGTAACGAGCTTGAGCCTGCCTGTTTGGAAGGAAATTGGAAGGTTTGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp TACAATTTTACATTCTTGCATGAGTGTGCGTTTAGTCTGGTCTACTGGTTCACCTTGCGTGGTTCATTTTaGACAGGCATGAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: YNFTFLHECAFSLVYWFTLRGSF*TGMRRW
Trigger: CCACCTCCTCATGCCTGTCCAAAATGAACCACGCAA...GGTGAACCAGTAGACCAGACTAAACGCACACTCATGCAAGAATGTAAAATTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp TGTAGGAGCCTGTCACATAGAGAAGTGTCCACACTCTCGGACCATATCTTTAAGGTCATGCATACACTTTaGCCAGAGAATATAATCCCT +
Preference number: 4 (lower is better)
Translates to: CRSLSHREVSTLSDHIFKVMHTL*PENIIP
Trigger: AGGGATTATATTCTCTGGTCAAAGTGTATGCATGAC...CTTAAAGATATGGTCCGAGAGTGTGGACACTTCTCTATGTGACAGGCTCCTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp TTTAGTCTGGTCTACTGGTTCACCCTTCAGGGAGAAATCTCATTAAAATGTATGAGGTTGAGGCTACAATaGGCTGTGATCACACCACTC +
Preference number: 4 (lower is better)
Translates to: FSLVYWFTLQGEISLKCMRLRLQ*AVITPL
Trigger: GAGTGGTGTGATCACAGCTCATTGTAGCCTCAACCT...CATACATTTTAATGAGATTTCTCCCTGAAGGGTGAACCAGTAGACCAGACTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp CTTTACTCTTCCTTTATAGAACAGAGGCCAAAATGCAGGAGGCAACAGGACCATATAATGCTGAGGCTCTaGCTAGAAGTTAGAAGTGTG +
Preference number: 4 (lower is better)
Translates to: LYSSFIEQRPKCRRQQDHIMLRL*LEVRSV
Trigger: CACACTTCTAACTTCTAGTCAGAGCCTCAGCATTAT...ATGGTCCTGTTGCCTCCTGCATTTTGGCCTCTGTTCTATAAAGGAAGAGTAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp AGACAAACCTTCCAATTTCCTTCCAAACAGGCAGGCTCAAGCTCGTTACTTGCTTCTGAGACTGGAGTCTaGCAGGATCTTTATTTTGTA +
Preference number: 4 (lower is better)
Translates to: RQTFQFPSKQAGSSSLLASETGV*QDLYFV
Trigger: TACAAAATAAAGATCCTGTCAGACTCCAGTCTCAGA...AGCAAGTAACGAGCTTGAGCCTGCCTGTTTGGAAGGAAATTGGAAGGTTTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp GCTTTGCATTTAACATTCAGTCAAGACACTAAAACCTTACAAAACAAGAACCTCGTGCTGGCTCGGAGATaGTACGCAGGAAAAGGTCCA +
Preference number: 4 (lower is better)
Translates to: ALHLTFSQDTKTLQNKNLVLARR*YAGKGP
Trigger: TGGACCTTTTCCTGCGTAGCATCTCCGAGCCAGCAC...GAGGTTCTTGTTTTGTAAGGTTTTAGTGTCTTGACTGAATGTTAAATGCAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR GCA 90 bp AAAATTATCTGCATTCCAAATTCTCTCCAAGGACATCCGACTTCCCAGGCAGATACATTCTCGTGCTGGTaGAATAGGATAAAACGGAGG +
Preference number: 4 (lower is better)
Translates to: KIICIPNSLQGHPTSQADTFSCW*NRIKRR
Trigger: CCTCCGTTTTATCCTATTGCACCAGCACGAGAATGT...ATCTGCCTGGGAAGTCGGATGTCCTTGGAGAGAATTTGGAATGCAGATAATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR GCA 90 bp TTTAGTCTGGTCTACTGGTTCACCCTTCAGGGAGAAATCTCATTAAAATGTATGAGGGCTCCACAGAGATaGCCACAAAGAACAGAGAGA +
Preference number: 4 (lower is better)
Translates to: FSLVYWFTLQGEISLKCMRAPQR*PQRTER
Trigger: TCTCTCTGTTCTTTGTGGGCATCTCTGTGGAGCCCT...CATACATTTTAATGAGATTTCTCCCTGAAGGGTGAACCAGTAGACCAGACTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp TCTCTAACTGGCTATTCCAGCACTCCCATTTCATGGTTGGGAAATTGTATTTTAATAATCGTGGTGTGCTaGAGGCATCACGATGAAGGC +
Preference number: 4 (lower is better)
Translates to: SLTGYSSTPISWLGNCILIIVVC*RHHDEG
Trigger: GCCTTCATCGTGATGCCTGCAGCACACCACGATTAT...TAAAATACAATTTCCCAACCATGAAATGGGAGTGCTGGAATAGCCAGTTAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp TGTAGGAGCCTGTCACATAGAGAAGTGTCCACACTCTCGGACCATATCTTTAAGGATTTTTCTAACATTTaGCTCTGCTGGAAACCCCTA +
Preference number: 4 (lower is better)
Translates to: CRSLSHREVSTLSDHIFKDFSNI*LCWKPL
Trigger: TAGGGGTTTCCAGCAGAGCCAAATGTTAGAAAAATC...CTTAAAGATATGGTCCGAGAGTGTGGACACTTCTCTATGTGACAGGCTCCTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp TGTAGGAGCCTGTCACATAGAGAAGTGTCCACACTCTCGGACCATATCTTTAAGAAATGGATGGATCTTTaGCAAGAATGGAACAGAGCT +
Preference number: 4 (lower is better)
Translates to: CRSLSHREVSTLSDHIFKKWMDL*QEWNRA
Trigger: AGCTCTGTTCCATTCTTGCCAAAGATCCATCCATTT...CTTAAAGATATGGTCCGAGAGTGTGGACACTTCTCTATGTGACAGGCTCCTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp AAAATTATCTGCATTCCAAATTCTCTCCAAGGACATCCGACTTCCCAGGCAGATCCCAGTTGCAAGTACTaGACAAAAGTAGGTGTTCTC +
Preference number: 4 (lower is better)
Translates to: KIICIPNSLQGHPTSQADPSCKY*TKVGVL
Trigger: GAGAACACCTACTTTTGTCCAGTACTTGCAACTGGG...ATCTGCCTGGGAAGTCGGATGTCCTTGGAGAGAATTTGGAATGCAGATAATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CCA 90 bp TACAATTTTACATTCTTGCATGAGTGTGCGTTTAGTCTGGTCTACTGGTTCACCATGATTTGGTCATACTaGGCAATGAGCTCCTCGCTC +
Preference number: 4 (lower is better)
Translates to: YNFTFLHECAFSLVYWFTMIWSY*AMSSSL
Trigger: GAGCGAGGAGCTCATTGCCCAGTATGACCAAATCAT...GGTGAACCAGTAGACCAGACTAAACGCACACTCATGCAAGAATGTAAAATTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp AGACAAACCTTCCAATTTCCTTCCAAACAGGCAGGCTCAAGCTCGTTACTTGCTGGGTGGAACATAAAGTaGTTTGACAGTGTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: RQTFQFPSKQAGSSSLLAGWNIK*FDSVLF
Trigger: AAACAGAACACTGTCAAACCACTTTATGTTCCACCC...AGCAAGTAACGAGCTTGAGCCTGCCTGTTTGGAAGGAAATTGGAAGGTTTGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp TTTAGTCTGGTCTACTGGTTCACCCTTCAGGGAGAAATCTCATTAAAATGTATGCACCCTCCTTCAGCTTaGAGTTGGTTAGTTCAGGAC +
Preference number: 4 (lower is better)
Translates to: FSLVYWFTLQGEISLKCMHPPSA*SWLVQD
Trigger: GTCCTGAACTAACCAACTCCAAGCTGAAGGAGGGTG...CATACATTTTAATGAGATTTCTCCCTGAAGGGTGAACCAGTAGACCAGACTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
3UTR CAA 72 bp CCAGCTTCTGAAATCCTGAAAGCCAAACCTTGTAAGTaGATATCATCACTGCTGCTAGGAAAAACCCAAAGC +
Preference number: 4 (lower is better)
Translates to: PASEILKAKPCK*ISSLLLGKTQS
Trigger: GCTTTGGGTTTTTCCTAGCAGCAGTGATGATATCAACTTACAAGGTTTGGCTTTCAGGATTTCAGAAGCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp GCTTTGCATTTAACATTCAGTCAAGACACTAAAACCTTACAAAACAAGAACCTCGCTGGTGCGACTGGGTaGCCAACATCTCATACATCT +
Preference number: 4 (lower is better)
Translates to: ALHLTFSQDTKTLQNKNLAGATG*PTSHTS
Trigger: AGATGTATGAGATGTTGGTCACCCAGTCGCACCAGC...GAGGTTCTTGTTTTGTAAGGTTTTAGTGTCTTGACTGAATGTTAAATGCAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR TCA 90 bp TCTCTAACTGGCTATTCCAGCACTCCCATTTCATGGTTGGGAAATTGTATTTTAAGAATGGAACAGAGCTaGTTGAGTAGGACAACCAGC +
Preference number: 4 (lower is better)
Translates to: SLTGYSSTPISWLGNCILRMEQS*LSRTTS
Trigger: GCTGGTTGTCCTACTCAATCAGCTCTGTTCCATTCT...TAAAATACAATTTCCCAACCATGAAATGGGAGTGCTGGAATAGCCAGTTAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp GCTTTGCATTTAACATTCAGTCAAGACACTAAAACCTTACAAAACAAGAACCTCTTGATGGGGACACTCTaGACTTCAGCCTGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: ALHLTFSQDTKTLQNKNLLMGTL*TSAWAS
Trigger: TGAAGCCCAGGCTGAAGTTCAGAGTGTCCCCATCAA...GAGGTTCTTGTTTTGTAAGGTTTTAGTGTCTTGACTGAATGTTAAATGCAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR TCA 90 bp TGTAGGAGCCTGTCACATAGAGAAGTGTCCACACTCTCGGACCATATCTTTAAGGGAGCAACCAGCTTATaGGACTTACATTCTATATAT +
Preference number: 4 (lower is better)
Translates to: CRSLSHREVSTLSDHIFKGATSL*DLHSIY
Trigger: ATATATAGAATGTAAGTCTCATAAGCTGGTTGCTCC...CTTAAAGATATGGTCCGAGAGTGTGGACACTTCTCTATGTGACAGGCTCCTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp TGTAGGAGCCTGTCACATAGAGAAGTGTCCACACTCTCGGACCATATCTTTAAGTCCCTAAAGAACCTCTaGAAATCTTTCACTAAAGTC +
Preference number: 4 (lower is better)
Translates to: CRSLSHREVSTLSDHIFKSLKNL*KSFTKV
Trigger: GACTTTAGTGAAAGATTTTCAGAGGTTCTTTAGGGA...CTTAAAGATATGGTCCGAGAGTGTGGACACTTCTCTATGTGACAGGCTCCTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp GCTTTGCATTTAACATTCAGTCAAGACACTAAAACCTTACAAAACAAGAACCTCATGTCGAAGTCATGCTaGCAGGTCCTATTGGCCGTC +
Preference number: 4 (lower is better)
Translates to: ALHLTFSQDTKTLQNKNLMSKSC*QVLLAV
Trigger: GACGGCCAATAGGACCTGTCAGCATGACTTCGACAT...GAGGTTCTTGTTTTGTAAGGTTTTAGTGTCTTGACTGAATGTTAAATGCAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp GCTTTGCATTTAACATTCAGTCAAGACACTAAAACCTTACAAAACAAGAACCTCCAGAATCGGCCCCATTaGAGCATCTTTGGCTTGCTC +
Preference number: 4 (lower is better)
Translates to: ALHLTFSQDTKTLQNKNLQNRPH*SIFGLL
Trigger: GAGCAAGCCAAAGATGCTGCAATGGGGCCGATTCTG...GAGGTTCTTGTTTTGTAAGGTTTTAGTGTCTTGACTGAATGTTAAATGCAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR GCA 90 bp CTTTACTCTTCCTTTATAGAACAGAGGCCAAAATGCAGGAGGCAACAGGACCATATGTGGACATTCTCGTaGTGGTGCAATAGGATAAAA +
Preference number: 4 (lower is better)
Translates to: LYSSFIEQRPKCRRQQDHMWTFS*WCNRIK
Trigger: TTTTATCCTATTGCACCAGCACGAGAATGTCCACAT...ATGGTCCTGTTGCCTCCTGCATTTTGGCCTCTGTTCTATAAAGGAAGAGTAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR GCA 90 bp GCTTTGCATTTAACATTCAGTCAAGACACTAAAACCTTACAAAACAAGAACCTCTCCCATACTCCACAATaGAGGCTGACTCGGAGAACG +
Preference number: 4 (lower is better)
Translates to: ALHLTFSQDTKTLQNKNLSHTPQ*RLTRRT
Trigger: CGTTCTCCGAGTCAGCCTGCATTGTGGAGTATGGGA...GAGGTTCTTGTTTTGTAAGGTTTTAGTGTCTTGACTGAATGTTAAATGCAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR GCA 90 bp TCTCTAACTGGCTATTCCAGCACTCCCATTTCATGGTTGGGAAATTGTATTTTACAGAGCAAAGAAAACTaGCAAGGGAGCAACCAGCTT +
Preference number: 4 (lower is better)
Translates to: SLTGYSSTPISWLGNCILQSKEN*QGSNQL
Trigger: AAGCTGGTTGCTCCCTTGGCAGTTTTCTTTGCTCTG...TAAAATACAATTTCCCAACCATGAAATGGGAGTGCTGGAATAGCCAGTTAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp AGACAAACCTTCCAATTTCCTTCCAAACAGGCAGGCTCAAGCTCGTTACTTGCTTGGTCTTCACTAGTGTaGAAGAAGAGTTCTAAAATG +
Preference number: 4 (lower is better)
Translates to: RQTFQFPSKQAGSSSLLAWSSLV*KKSSKM
Trigger: CATTTTAGAACTCTTCTTCCACACTAGTGAAGACCA...AGCAAGTAACGAGCTTGAGCCTGCCTGTTTGGAAGGAAATTGGAAGGTTTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp AAAATTATCTGCATTCCAAATTCTCTCCAAGGACATCCGACTTCCCAGGCAGATAGCAGGAGCCAAGACTaGTACCAAAAATCCATTGTA +
Preference number: 4 (lower is better)
Translates to: KIICIPNSLQGHPTSQADSRSQD*YQKSIV
Trigger: TACAATGGATTTTTGGTACCAGTCTTGGCTCCTGCT...ATCTGCCTGGGAAGTCGGATGTCCTTGGAGAGAATTTGGAATGCAGATAATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CCA 90 bp TCTCTAACTGGCTATTCCAGCACTCCCATTTCATGGTTGGGAAATTGTATTTTAGCAAGGGATCAGGTGTaGGGTAATTCTGTTCCATCA +
Preference number: 4 (lower is better)
Translates to: SLTGYSSTPISWLGNCILARDQV*GNSVPS
Trigger: TGATGGAACAGAATTACCCCACACCTGATCCCTTGC...TAAAATACAATTTCCCAACCATGAAATGGGAGTGCTGGAATAGCCAGTTAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp GCTTTGCATTTAACATTCAGTCAAGACACTAAAACCTTACAAAACAAGAACCTCGACTACGCTGATGAATaGGCCTGTGAATGGGGTGCT +
Preference number: 4 (lower is better)
Translates to: ALHLTFSQDTKTLQNKNLDYADE*ACEWGA
Trigger: AGCACCCCATTCACAGGCCCATTCATCAGCGTAGTC...GAGGTTCTTGTTTTGTAAGGTTTTAGTGTCTTGACTGAATGTTAAATGCAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CCA 90 bp TACAATTTTACATTCTTGCATGAGTGTGCGTTTAGTCTGGTCTACTGGTTCACCTTTCACCCAGCCACATaGGTTTTCCTGTTCTCTCTA +
Preference number: 4 (lower is better)
Translates to: YNFTFLHECAFSLVYWFTFHPAT*VFLFSL
Trigger: TAGAGAGAACAGGAAAACCCATGTGGCTGGGTGAAA...GGTGAACCAGTAGACCAGACTAAACGCACACTCATGCAAGAATGTAAAATTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp GAAATTCGCAAAGATGGCTCTGCTTATAAAGGGGCCTCAGTGAAATACAATTTTCCACATGGTGACTATTaGGGAAAAGCCACCAGATCT +
Preference number: 4 (lower is better)
Translates to: EIRKDGSAYKGASVKYNFPHGDY*GKATRS
Trigger: AGATCTGGTGGCTTTTCCCCAATAGTCACCATGTGG...AAAATTGTATTTCACTGAGGCCCCTTTATAAGCAGAGCCATCTTTGCGAATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp GCTTTGCATTTAACATTCAGTCAAGACACTAAAACCTTACAAAACAAGAACCTCAAGAGTAGAGACCACTaGGCCCAGTTGCAAGTACTG +
Preference number: 4 (lower is better)
Translates to: ALHLTFSQDTKTLQNKNLKSRDH*AQLQVL
Trigger: CAGTACTTGCAACTGGGCTCAGTGGTCTCTACTCTT...GAGGTTCTTGTTTTGTAAGGTTTTAGTGTCTTGACTGAATGTTAAATGCAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR TCA 90 bp AAAATTATCTGCATTCCAAATTCTCTCCAAGGACATCCGACTTCCCAGGCAGATGTCATGCATACACTTTaGCCAGAGAATATAATCCCT +
Preference number: 4 (lower is better)
Translates to: KIICIPNSLQGHPTSQADVMHTL*PENIIP
Trigger: AGGGATTATATTCTCTGGTCAAAGTGTATGCATGAC...ATCTGCCTGGGAAGTCGGATGTCCTTGGAGAGAATTTGGAATGCAGATAATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR TCA 90 bp GCTTTGCATTTAACATTCAGTCAAGACACTAAAACCTTACAAAACAAGAACCTCACCCCAATATCTGCTTaGCGTGATCTGAGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: ALHLTFSQDTKTLQNKNLTPISA*RDLSCK
Trigger: CTTGCAGCTCAGATCACGTCAAGCAGATATTGGGGT...GAGGTTCTTGTTTTGTAAGGTTTTAGTGTCTTGACTGAATGTTAAATGCAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR TCA 90 bp AAAATTATCTGCATTCCAAATTCTCTCCAAGGACATCCGACTTCCCAGGCAGATTGCTCTCATATATTTTaGACCACAGAAGTCACTCAG +
Preference number: 4 (lower is better)
Translates to: KIICIPNSLQGHPTSQADCSHIF*TTEVTQ
Trigger: CTGAGTGACTTCTGTGGTTCAAAATATATGAGAGCA...ATCTGCCTGGGAAGTCGGATGTCCTTGGAGAGAATTTGGAATGCAGATAATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp TACAATTTTACATTCTTGCATGAGTGTGCGTTTAGTCTGGTCTACTGGTTCACCACAGTGTTTCCTCAGTaGTGTGATTTAAGGGTGGAA +
Preference number: 4 (lower is better)
Translates to: YNFTFLHECAFSLVYWFTTVFPQ*CDLRVE
Trigger: TTCCACCCTTAAATCACATCACTGAGGAAACACTGT...GGTGAACCAGTAGACCAGACTAAACGCACACTCATGCAAGAATGTAAAATTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp TCTCTAACTGGCTATTCCAGCACTCCCATTTCATGGTTGGGAAATTGTATTTTAAACTGCCTGTTGTCTTaGATGCCAGCTTCTGAAATC +
Preference number: 4 (lower is better)
Translates to: SLTGYSSTPISWLGNCILNCLLS*MPASEI
Trigger: GATTTCAGAAGCTGGCATTCAAGACAACAGGCAGTT...TAAAATACAATTTCCCAACCATGAAATGGGAGTGCTGGAATAGCCAGTTAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp TCTCTAACTGGCTATTCCAGCACTCCCATTTCATGGTTGGGAAATTGTATTTTACTGCTGGGTTGTATTTaGTCACTTCACTCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: SLTGYSSTPISWLGNCILLLGCI*SLHSSE
Trigger: CTCTGAAGAGTGAAGTGAGCAAATACAACCCAGCAG...TAAAATACAATTTCCCAACCATGAAATGGGAGTGCTGGAATAGCCAGTTAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp TTTAGTCTGGTCTACTGGTTCACCCTTCAGGGAGAAATCTCATTAAAATGTATGCTGATTTGGAGACACTaGAAACAACTTTCGACCCTG +
Preference number: 4 (lower is better)
Translates to: FSLVYWFTLQGEISLKCMLIWRH*KQLSTL
Trigger: CAGGGTCGAAAGTTGTTTCCAGTGTCTCCAAATCAG...CATACATTTTAATGAGATTTCTCCCTGAAGGGTGAACCAGTAGACCAGACTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp GCTTTGCATTTAACATTCAGTCAAGACACTAAAACCTTACAAAACAAGAACCTCACTCCAGGGAGTTCATaGACTGGACAAGAGAAGGAA +
Preference number: 4 (lower is better)
Translates to: ALHLTFSQDTKTLQNKNLTPGSS*TGQEKE
Trigger: TTCCTTCTCTTGTCCAGTTCATGAACTCCCTGGAGT...GAGGTTCTTGTTTTGTAAGGTTTTAGTGTCTTGACTGAATGTTAAATGCAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR TCA 90 bp GCTTTGCATTTAACATTCAGTCAAGACACTAAAACCTTACAAAACAAGAACCTCACTGTGAAACGGGTCTaGATTGTCCCTATTCCACTC +
Preference number: 4 (lower is better)
Translates to: ALHLTFSQDTKTLQNKNLTVKRV*IVPIPL
Trigger: GAGTGGAATAGGGACAATTCAGACCCGTTTCACAGT...GAGGTTCTTGTTTTGTAAGGTTTTAGTGTCTTGACTGAATGTTAAATGCAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR TCA 90 bp TCTCTAACTGGCTATTCCAGCACTCCCATTTCATGGTTGGGAAATTGTATTTTAATTCTCATTCAGCTCTaGCAAACTGCCTGTTGTCTT +
Preference number: 4 (lower is better)
Translates to: SLTGYSSTPISWLGNCILILIQL*QTACCL
Trigger: AAGACAACAGGCAGTTTGTCAGAGCTGAATGAGAAT...TAAAATACAATTTCCCAACCATGAAATGGGAGTGCTGGAATAGCCAGTTAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp GCTTTGCATTTAACATTCAGTCAAGACACTAAAACCTTACAAAACAAGAACCTCGGCCCTGAAGTGTCATaGATACACTTTGACCAGAGA +
Preference number: 4 (lower is better)
Translates to: ALHLTFSQDTKTLQNKNLGPEVS*IHFDQR
Trigger: TCTCTGGTCAAAGTGTATGCATGACACTTCAGGGCC...GAGGTTCTTGTTTTGTAAGGTTTTAGTGTCTTGACTGAATGTTAAATGCAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR GCA 90 bp GCTTTGCATTTAACATTCAGTCAAGACACTAAAACCTTACAAAACAAGAACCTCGACCATTCGCACAGTTaGAGGTGTACAATCTTCCTG +
Preference number: 4 (lower is better)
Translates to: ALHLTFSQDTKTLQNKNLDHSHS*RCTIFL
Trigger: CAGGAAGATTGTACACCTGCAACTGTGCGAATGGTC...GAGGTTCTTGTTTTGTAAGGTTTTAGTGTCTTGACTGAATGTTAAATGCAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR GCA 90 bp TTTAGTCTGGTCTACTGGTTCACCCTTCAGGGAGAAATCTCATTAAAATGTATGGGGGAAAGAGTCAACTaGATTCTCTTACAGTGTTTC +
Preference number: 4 (lower is better)
Translates to: FSLVYWFTLQGEISLKCMGERVN*ILLQCF
Trigger: GAAACACTGTAAGAGAATGCAGTTGACTCTTTCCCC...CATACATTTTAATGAGATTTCTCCCTGAAGGGTGAACCAGTAGACCAGACTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp CTTTACTCTTCCTTTATAGAACAGAGGCCAAAATGCAGGAGGCAACAGGACCATAGAAGAGTTCTAAAATaGATGGATCTTTGGCAAGAA +
Preference number: 4 (lower is better)
Translates to: LYSSFIEQRPKCRRQQDHRRVLK*MDLWQE
Trigger: TTCTTGCCAAAGATCCATCCATTTTAGAACTCTTCT...ATGGTCCTGTTGCCTCCTGCATTTTGGCCTCTGTTCTATAAAGGAAGAGTAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CCA 90 bp GAAATTCGCAAAGATGGCTCTGCTTATAAAGGGGCCTCAGTGAAATACAATTTTACAGCCAAGCTGATTTaGAGACACTGGAAACAACTT +
Preference number: 4 (lower is better)
Translates to: EIRKDGSAYKGASVKYNFTAKLI*RHWKQL
Trigger: AAGTTGTTTCCAGTGTCTCCAAATCAGCTTGGCTGT...AAAATTGTATTTCACTGAGGCCCCTTTATAAGCAGAGCCATCTTTGCGAATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp GCTTTGCATTTAACATTCAGTCAAGACACTAAAACCTTACAAAACAAGAACCTCACCATCACATCATCCTaGAAGTCCGACTCTTCTATG +
Preference number: 4 (lower is better)
Translates to: ALHLTFSQDTKTLQNKNLTITSS*KSDSSM
Trigger: CATAGAAGAGTCGGACTTTCAGGATGATGTGATGGT...GAGGTTCTTGTTTTGTAAGGTTTTAGTGTCTTGACTGAATGTTAAATGCAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR TCA 90 bp GCTTTGCATTTAACATTCAGTCAAGACACTAAAACCTTACAAAACAAGAACCTCAATATCTGCTTGACGTaGTCTGAGCTGCAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: ALHLTFSQDTKTLQNKNLNICLT*SELQEE
Trigger: CTCTTCTTGCAGCTCAGATCACGTCAAGCAGATATT...GAGGTTCTTGTTTTGTAAGGTTTTAGTGTCTTGACTGAATGTTAAATGCAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR TCA 90 bp TCTCTAACTGGCTATTCCAGCACTCCCATTTCATGGTTGGGAAATTGTATTTTAAGCTCGCTTACTGTATaGAACAAATTAATGGACAGC +
Preference number: 4 (lower is better)
Translates to: SLTGYSSTPISWLGNCILSSLTV*NKLMDS
Trigger: GCTGTCCATTAATTTGTTTCATACAGTAAGCGAGCT...TAAAATACAATTTCCCAACCATGAAATGGGAGTGCTGGAATAGCCAGTTAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp GAAATTCGCAAAGATGGCTCTGCTTATAAAGGGGCCTCAGTGAAATACAATTTTTCTTCAATAACCTACTaGTGGGTTGTATTTGCTCAC +
Preference number: 4 (lower is better)
Translates to: EIRKDGSAYKGASVKYNFSSITY*WVVFAH
Trigger: GTGAGCAAATACAACCCAGCAGTAGGTTATTGAAGA...AAAATTGTATTTCACTGAGGCCCCTTTATAAGCAGAGCCATCTTTGCGAATTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR GCA 90 bp GCTTTGCATTTAACATTCAGTCAAGACACTAAAACCTTACAAAACAAGAACCTCACCACTGAGCCCAGTTaGAAGTACTGGACAAAAGTA +
Preference number: 4 (lower is better)
Translates to: ALHLTFSQDTKTLQNKNLTTEPS*KYWTKV
Trigger: TACTTTTGTCCAGTACTTGCAACTGGGCTCAGTGGT...GAGGTTCTTGTTTTGTAAGGTTTTAGTGTCTTGACTGAATGTTAAATGCAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CCA 90 bp GCTTTGCATTTAACATTCAGTCAAGACACTAAAACCTTACAAAACAAGAACCTCTGGACATTCTCGTGCTaGTGCAATAGGATAAAACGG +
Preference number: 4 (lower is better)
Translates to: ALHLTFSQDTKTLQNKNLWTFSC*CNRIKR
Trigger: CCGTTTTATCCTATTGCACCAGCACGAGAATGTCCA...GAGGTTCTTGTTTTGTAAGGTTTTAGTGTCTTGACTGAATGTTAAATGCAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CCA 90 bp GCTTTGCATTTAACATTCAGTCAAGACACTAAAACCTTACAAAACAAGAACCTCTCTGTTTTCCCCTCTTaGTGGTGGTTTAACATGGCT +
Preference number: 4 (lower is better)
Translates to: ALHLTFSQDTKTLQNKNLSVFPS*WWFNMA
Trigger: AGCCATGTTAAACCACCACCAAGAGGGGAAAACAGA...GAGGTTCTTGTTTTGTAAGGTTTTAGTGTCTTGACTGAATGTTAAATGCAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR TCA 90 bp GAAATTCGCAAAGATGGCTCTGCTTATAAAGGGGCCTCAGTGAAATACAATTTTTGTTGGGTTCTGAAATaGCACAGTAAATCTAAACTC +
Preference number: 4 (lower is better)
Translates to: EIRKDGSAYKGASVKYNFCWVLK*HSKSKL
Trigger: GAGTTTAGATTTACTGTGTCATTTCAGAACCCAACA...AAAATTGTATTTCACTGAGGCCCCTTTATAAGCAGAGCCATCTTTGCGAATTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp GCTTTGCATTTAACATTCAGTCAAGACACTAAAACCTTACAAAACAAGAACCTCGTGAGTAGGAATCTTTaGTGTCTTGCTTGGACTATG +
Preference number: 4 (lower is better)
Translates to: ALHLTFSQDTKTLQNKNLVSRNL*CLAWTM
Trigger: CATAGTCCAAGCAAGACACCAAAGATTCCTACTCAC...GAGGTTCTTGTTTTGTAAGGTTTTAGTGTCTTGACTGAATGTTAAATGCAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CCA 90 bp GCTTTGCATTTAACATTCAGTCAAGACACTAAAACCTTACAAAACAAGAACCTCAAATGGATGGATCTTTaGCAAGAATGGAACAGAGCT +
Preference number: 4 (lower is better)
Translates to: ALHLTFSQDTKTLQNKNLKWMDL*QEWNRA
Trigger: AGCTCTGTTCCATTCTTGCCAAAGATCCATCCATTT...GAGGTTCTTGTTTTGTAAGGTTTTAGTGTCTTGACTGAATGTTAAATGCAAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CCA 90 bp GCTTTGCATTTAACATTCAGTCAAGACACTAAAACCTTACAAAACAAGAACCTCACAACCTGTGCCCAGTaGTTTTTAAATACAATCATG +
Preference number: 4 (lower is better)
Translates to: ALHLTFSQDTKTLQNKNLTTCAQ*FLNTIM
Trigger: CATGATTGTATTTAAAAACCACTGGGCACAGGTTGT...GAGGTTCTTGTTTTGTAAGGTTTTAGTGTCTTGACTGAATGTTAAATGCAAAGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS CCA 90 bp AATGGAGTGTTCCTGGGCCAAGGCCGCCAGCTCCTTCAGGAACTCTaGGAAGAGGGCAGCAGCCAGCATGGGGTTCCTCACCGGCAGGGG +
Preference number: 5 (lower is better)
Translates to: NGVFLGQGRQLLQEL*EEGSSQHGVPHRQG
Trigger: CCCCTGCCGGTGAGGAACCCCATGCTGGCTGCTGCCCTCTTCCCAGAGTTCCTGAAGGAGCTGGCGGCCTTGGCCCAGGAACACTCCATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS GCA 90 bp GGGAGTCGCCATCATACAGGGCGGACCAGACACGGCAGTCCCTCATaGAGCGGAGGATGTTGGTGTGGGCCTCCCACAGGTACTGCAGGT +
Preference number: 5 (lower is better)
Translates to: GSRHHTGRTRHGSPS*SGGCWCGPPTGTAG
Trigger: ACCTGCAGTACCTGTGGGAGGCCCACACCAACATCCTCCGCTGCATGAGGGACTGCCGTGTCTGGTCCGCCCTGTATGATGGCGACTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS TCA 90 bp CAGGCCCGGCTCAAACTCAGGAGTGCCCGGGAAGAATGTAGGTCGTaGGAAGGTCGGAGCGCAACTTTTCGAAGGTGCGTCAGCCGCGGG +
Preference number: 5 (lower is better)
Translates to: QARLKLRSAREECRS*EGRSATFRRCVSRG
Trigger: CCCGCGGCTGACGCACCTTCGAAAAGTTGCGCTCCGACCTTCTCACGACCTACATTCTTCCCGGGCACTCCTGAGTTTGAGCCGGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS CCA 90 bp AACACAGGGCAGGCCGAGCTCACACTGCCCTCCTCCGTCAGACTCTaGAGAAACATCTCAGGGTCGGGGGAGTCGCCATCATACAGGGCG +
Preference number: 5 (lower is better)
Translates to: NTGQAELTLPSSVRL*RNISGSGESPSYRA
Trigger: CGCCCTGTATGATGGCGACTCCCCCGACCCTGAGATGTTTCTCCAGAGTCTGACGGAGGAGGGCAGTGTGAGCTCGGCCTGCCCTGTGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS CCA 90 bp TCTGGCTCTTGTCCTTTCTGGGAGCCAGCTGAGGTCCTGTCTTCCTaGGGAGTTGTTGCGGGAGCCCGAACACAGGGCAGGCCGAGCTCA +
Preference number: 5 (lower is better)
Translates to: SGSCPFWEPAEVLSS*GVVAGARTQGRPSS
Trigger: TGAGCTCGGCCTGCCCTGTGTTCGGGCTCCCGCAACAACTCCCCAGGAAGACAGGACCTCAGCTGGCTCCCAGAAAGGACAAGAGCCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS TCA 90 bp TCCCATTCCAGCTCTGTCTGGCTCTTGTCCTTTCTGGGAGCCAGCTaGGGTCCTGTCTTCCTGGGGAGTTGTTGCGGGAGCCCGAACACA +
Preference number: 5 (lower is better)
Translates to: SHSSSVWLLSFLGAS*GPVFLGSCCGSPNT
Trigger: TGTGTTCGGGCTCCCGCAACAACTCCCCAGGAAGACAGGACCTCAGCTGGCTCCCAGAAAGGACAAGAGCCAGACAGAGCTGGAATGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS CCA 90 bp TTAATGATTTGGTCATACTGGGCAATGAGCTCCTCGCTCTCCGGGTaGGCGGCTGTCAGGTTAGAGCTGTGCTCTGCCTCAGGGGCAGGG +
Preference number: 5 (lower is better)
Translates to: LMIWSYWAMSSSLSG*AAVRLELCSASGAG
Trigger: CCCTGCCCCTGAGGCAGAGCACAGCTCTAACCTGACAGCCGCCCACCCGGAGAGCGAGGAGCTCATTGCCCAGTATGACCAAATCATTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS CCA 90 bp AAGCCCTCGGCGCCGGAATCCAGCTCTTTAATGATTTGGTCATACTaGGCAATGAGCTCCTCGCTCTCCGGGTGGGCGGCTGTCAGGTTA +
Preference number: 5 (lower is better)
Translates to: KPSAPESSSLMIWSY*AMSSSLSGWAAVRL
Trigger: TAACCTGACAGCCGCCCACCCGGAGAGCGAGGAGCTCATTGCCCAGTATGACCAAATCATTAAAGAGCTGGATTCCGGCGCCGAGGGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS CCA 90 bp TGTTCCATCAAGCCCTCGGCGCCGGAATCCAGCTCTTTAATGATTTaGTCATACTGGGCAATGAGCTCCTCGCTCTCCGGGTGGGCGGCT +
Preference number: 5 (lower is better)
Translates to: CSIKPSAPESSSLMI*SYWAMSSSLSGWAA
Trigger: AGCCGCCCACCCGGAGAGCGAGGAGCTCATTGCCCAGTATGACCAAATCATTAAAGAGCTGGATTCCGGCGCCGAGGGCTTGATGGAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CAA 90 bp TTCCTCAGGACTTCCCTGAGAGTGATGAGAAAGGTGCCCCTCTTCCCCAGCCCAAGCTCTGTCTGGCTCTaGTCCTTTCTGGGAGCCAGC +
Preference number: 5 (lower is better)
Translates to: FLRTSLRVMRKVPLFPSPSSVWL*SFLGAS
Trigger: GCTGGCTCCCAGAAAGGACAAGAGCCAGACAGAGCT...TGGGCTGGGGAAGAGGGGCACCTTTCTCATCACTCTCAGGGAAGTCCTGAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CAA 90 bp TCGGAAGGCAGCATTTCCATGCAGAGTGAGTCGCCAGCAGGCACTTGGCTTTGCAGAGAGAGCGGACGCTaGGCTGGAAGACCATGTTGG +
Preference number: 5 (lower is better)
Translates to: SEGSISMQSESPAGTWLCRESGR*AGRPCW
Trigger: CCAACATGGTCTTCCAGCCAAGCGTCCGCTCTCTCT...GCAAAGCCAAGTGCCTGCTGGCGACTCACTCTGCATGGAAATGCTGCCTTCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS CCA 90 bp CATAGCTGTCATCCCATTCCAGCTCTGTCTGGCTCTTGTCCTTTCTaGGAGCCAGCTGAGGTCCTGTCTTCCTGGGGAGTTGTTGCGGGA +
Preference number: 5 (lower is better)
Translates to: HSCHPIPALSGSCPF*EPAEVLSSWGVVAG
Trigger: TCCCGCAACAACTCCCCAGGAAGACAGGACCTCAGCTGGCTCCCAGAAAGGACAAGAGCCAGACAGAGCTGGAATGGGATGACAGCTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CAA 90 bp GAGGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTCCTGTGCTGCTGTGTCTTCCTGGGGAGTaGTTGCGGGAGCCCGAACAC +
Preference number: 5 (lower is better)
Translates to: EATGPFAQLQVYNLPVLLCLPGE*LREPEH
Trigger: GTGTTCGGGCTCCCGCAACAACTCCCCAGGAAGACA...CAGCAGCACAGGAAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS CCA 90 bp CACGGGATGGCGACTGGCAAAGGCAGCCTCATCTCTCCCCACAAATaGGGAAGGCACAGTCTCTACAGCAGGCATCTCCGCTATAAAAGA +
Preference number: 5 (lower is better)
Translates to: HGMATGKGSLISPHK*GRHSLYSRHLRYKR
Trigger: TCTTTTATAGCGGAGATGCCTGCTGTAGAGACTGTGCCTTCCCCATTTGTGGGGAGAGATGAGGCTGCCTTTGCCAGTCGCCATCCCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS CCA 90 bp CTCAGCCACCTTGGTTCTGTGGGTCAGGAAGGGCTGAAGCACTCTTaGAGGTCCATCCAAAAGGTTCTTGCCACTTCCTGTCCTGGAAGC +
Preference number: 5 (lower is better)
Translates to: LSHLGSVGQEGLKHS*RSIQKVLATSCPGS
Trigger: GCTTCCAGGACAGGAAGTGGCAAGAACCTTTTGGATGGACCTCCAAGAGTGCTTCAGCCCTTCCTGACCCACAGAACCAAGGTGGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CAA 90 bp TTGGAGACACTGGAAACAACTTTCGACCCTGAGTACCCACTGGCTGCCCAAATTCTTCCTGGGGAGTTGTaGCGGGAGCCCGAACACAGG +
Preference number: 5 (lower is better)
Translates to: LETLETTFDPEYPLAAQILPGEL*REPEHR
Trigger: CCTGTGTTCGGGCTCCCGCAACAACTCCCCAGGAAG...AATTTGGGCAGCCAGTGGGTACTCAGGGTCGAAAGTTGTTTCCAGTGTCTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CAA 90 bp TATAGAACAGAGGCCAAAATGCAGGAGGCAACAGGACCATTCGCACAGTTGCAGCTTCCTGGGGAGTTGTaGCGGGAGCCCGAACACAGG +
Preference number: 5 (lower is better)
Translates to: YRTEAKMQEATGPFAQLQLPGEL*REPEHR
Trigger: CCTGTGTTCGGGCTCCCGCAACAACTCCCCAGGAAG...CTGCAACTGTGCGAATGGTCCTGTTGCCTCCTGCATTTTGGCCTCTGTTCTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CAA 90 bp GAGGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTCCTGTGCTGCTGAGCTCTGTCTGGCTCTaGTCCTTTCTGGGAGCCAGC +
Preference number: 5 (lower is better)
Translates to: EATGPFAQLQVYNLPVLLSSVWL*SFLGAS
Trigger: GCTGGCTCCCAGAAAGGACAAGAGCCAGACAGAGCT...CAGCAGCACAGGAAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CAA 90 bp GAGGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTCCTGTGCTGCTGCACTGCTCCACAGCATaGCAGGTGTGGTTCTTCCGC +
Preference number: 5 (lower is better)
Translates to: EATGPFAQLQVYNLPVLLHCSTA*QVWFFR
Trigger: GCGGAAGAACCACACCTGCAATGCTGTGGAGCAGTG...CAGCAGCACAGGAAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCCTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS CCA 90 bp AACAGCAGGAGTCCTCAAAGTCACCCAAGATCTTGTAGCACAGAATaGAGTGTTCCTGGGCCAAGGCCGCCAGCTCCTTCAGGAACTCTG +
Preference number: 5 (lower is better)
Translates to: NSRSPQSHPRSCSTE*SVPGPRPPAPSGTL
Trigger: CAGAGTTCCTGAAGGAGCTGGCGGCCTTGGCCCAGGAACACTCCATTCTGTGCTACAAGATCTTGGGTGACTTTGAGGACTCCTGCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CAA 90 bp GAGGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTCCTGTGCTGCTGCCAGAATCGGCCCCATaGCAGCATCTTTGGCTTGCT +
Preference number: 5 (lower is better)
Translates to: EATGPFAQLQVYNLPVLLPESAP*QHLWLA
Trigger: AGCAAGCCAAAGATGCTGCAATGGGGCCGATTCTGG...CAGCAGCACAGGAAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CAA 90 bp GAGGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTCCTGTGCTGCTGCCACAGTGGGGGTGGTaGTTCCTGAACAAGAGCTCA +
Preference number: 5 (lower is better)
Translates to: EATGPFAQLQVYNLPVLLPQWGW*FLNKSS
Trigger: TGAGCTCTTGTTCAGGAACAACCACCCCCACTGTGG...CAGCAGCACAGGAAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CAA 90 bp CAGGTGACCTGTTTGCATTTACATCCAAGGTCCCAAAGTGGGCTGTACAGTTCCGGTGCCTCAGCCACCTaGGTTCTGTGGGTCAGGAAG +
Preference number: 5 (lower is better)
Translates to: QVTCLHLHPRSQSGLYSSGASAT*VLWVRK
Trigger: CTTCCTGACCCACAGAACCAAGGTGGCTGAGGCACC...GGAACTGTACAGCCCACTTTGGGACCTTGGATGTAAATGCAAACAGGTCACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CAA 90 bp GGGACAGATGATATGTGCTTTCGTGATGGAGGCAGGAGGAGCTCCATCTTTACTGGTGCCTCAGCCACCTaGGTTCTGTGGGTCAGGAAG +
Preference number: 5 (lower is better)
Translates to: GTDDMCFRDGGRRSSIFTGASAT*VLWVRK
Trigger: CTTCCTGACCCACAGAACCAAGGTGGCTGAGGCACC...AGTAAAGATGGAGCTCCTCCTGCCTCCATCACGAAAGCACATATCATCTGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS CCA 90 bp TGGATTCTGGGGCTGCTTCAGGTTCCCTCTCTTGCTTTGGCTCCTTaGGCTCACTGTGAAACGGGTCTGAATTGTCCCTATTCCACTCCT +
Preference number: 5 (lower is better)
Translates to: WILGLLQVPSLALAP*AHCETGLNCPYSTP
Trigger: AGGAGTGGAATAGGGACAATTCAGACCCGTTTCACAGTGAGCCCAAGGAGCCAAAGCAAGAGAGGGAACCTGAAGCAGCCCCAGAATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CAA 90 bp ATCCACAGGGCAAAAAGGGGCCTTGTTACAGGTGGGCCTTTCATAGACTTGTCCCCAGAATCGGCCCCATaGCAGCATCTTTGGCTTGCT +
Preference number: 5 (lower is better)
Translates to: IHRAKRGLVTGGPFIDLSPESAP*QHLWLA
Trigger: AGCAAGCCAAAGATGCTGCAATGGGGCCGATTCTGG...GGACAAGTCTATGAAAGGCCCACCTGTAACAAGGCCCCTTTTTGCCCTGTGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CAA 90 bp GGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTCCTGTGCTGCTGAATTCAGGTTCCCTCTCTaGCTTTGGCTCCTTGGGCTC +
Preference number: 5 (lower is better)
Translates to: GNRTIRTVAGVQSSCAAEFRFPL*LWLLGL
Trigger: GAGCCCAAGGAGCCAAAGCAAGAGAGGGAACCTGAA...TTCAGCAGCACAGGAAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CAA 90 bp GCCAAAATGCAGGAGGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTTGTGAATGGGGTGCTTaGAGTCCTCACGGGATGGCG +
Preference number: 5 (lower is better)
Translates to: AKMQEATGPFAQLQVYNLCEWGA*SPHGMA
Trigger: CGCCATCCCGTGAGGACTCAAAGCACCCCATTCACA...AAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCCTCCTGCATTTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS TCA 90 bp GCTGCTTCAGGTTCCCTCTCTTGCTTTGGCTCCTTGGGCTCACTGTaGAACGGGTCTGAATTGTCCCTATTCCACTCCTCCTCTGAATCT +
Preference number: 5 (lower is better)
Translates to: AASGSLSCFGSLGSL*NGSELSLFHSSSES
Trigger: AGATTCAGAGGAGGAGTGGAATAGGGACAATTCAGACCCGTTTCACAGTGAGCCCAAGGAGCCAAAGCAAGAGAGGGAACCTGAAGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS CCA 90 bp GAACAAGAGCTCAGCAACATCATCAGAGGCTTCAGAATGGGTTTGTaGTGCAGCAGAGGCTGGTGCGACTGGGTGACCAACATCTCATAC +
Preference number: 5 (lower is better)
Translates to: EQELSNIIRGFRMGL*CSRGWCDWVTNISY
Trigger: GTATGAGATGTTGGTCACCCAGTCGCACCAGCCTCTGCTGCACCACAAACCCATTCTGAAGCCTCTGATGATGTTGCTGAGCTCTTGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CAA 90 bp TATCCACAGGGCAAAAAGGGGCCTTGTTACAGGTGGGCCTTTCATAGACTTGTCAGCCGAAACGGGGTGTaGATTCGACTCGTGAGAGTG +
Preference number: 5 (lower is better)
Translates to: YPQGKKGPCYRWAFHRLVSRNGV*IRLVRV
Trigger: CACTCTCACGAGTCGAATCAACACCCCGTTTCGGCT...GACAAGTCTATGAAAGGCCCACCTGTAACAAGGCCCCTTTTTGCCCTGTGGATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CAA 90 bp GGGACAGATGATATGTGCTTTCGTGATGGAGGCAGGAGGAGCTCCATCTTTACTAGCCGAAACGGGGTGTaGATTCGACTCGTGAGAGTG +
Preference number: 5 (lower is better)
Translates to: GTDDMCFRDGGRRSSIFTSRNGV*IRLVRV
Trigger: CACTCTCACGAGTCGAATCAACACCCCGTTTCGGCT...AGTAAAGATGGAGCTCCTCCTGCCTCCATCACGAAAGCACATATCATCTGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CAA 90 bp GGGACAGATGATATGTGCTTTCGTGATGGAGGCAGGAGGAGCTCCATCTTTACTGTTCCCTCTCTTGCTTaGGCTCCTTGGGCTCACTGT +
Preference number: 5 (lower is better)
Translates to: GTDDMCFRDGGRRSSIFTVPSLA*APWAHC
Trigger: ACAGTGAGCCCAAGGAGCCAAAGCAAGAGAGGGAAC...AGTAAAGATGGAGCTCCTCCTGCCTCCATCACGAAAGCACATATCATCTGTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CAA 90 bp GAGGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTCCTGTGCTGCTGGGACCATTCGCACAGTaGCAGGTGTACAATCTTCCT +
Preference number: 5 (lower is better)
Translates to: EATGPFAQLQVYNLPVLLGPFAQ*QVYNLP
Trigger: AGGAAGATTGTACACCTGCAACTGTGCGAATGGTCC...CAGCAGCACAGGAAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CAA 90 bp TATCCACAGGGCAAAAAGGGGCCTTGTTACAGGTGGGCCTTTCATAGACTTGTCCGCTCATACAGCACGTaGGGGCCTTCTAATGAACCC +
Preference number: 5 (lower is better)
Translates to: YPQGKKGPCYRWAFHRLVRSYST*GPSNEP
Trigger: GGGTTCATTAGAAGGCCCCAACGTGCTGTATGAGCG...GACAAGTCTATGAAAGGCCCACCTGTAACAAGGCCCCTTTTTGCCCTGTGGATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CAA 90 bp GGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTCCTGTGCTGCTGAAGCTCAAGCTCGTTACTaGCTTCGCACCTGCAGAACT +
Preference number: 5 (lower is better)
Translates to: GNRTIRTVAGVQSSCAAEAQARY*LRTCRT
Trigger: AGTTCTGCAGGTGCGAAGCAAGTAACGAGCTTGAGC...TTCAGCAGCACAGGAAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CAA 90 bp TATAGAACAGAGGCCAAAATGCAGGAGGCAACAGGACCATTCGCACAGTTGCAGAGGCCAGGTCTCCTGTaGTCATTTCACAGGCCAGCT +
Preference number: 5 (lower is better)
Translates to: YRTEAKMQEATGPFAQLQRPGLL*SFHRPA
Trigger: AGCTGGCCTGTGAAATGACAACAGGAGACCTGGCCT...CTGCAACTGTGCGAATGGTCCTGTTGCCTCCTGCATTTTGGCCTCTGTTCTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CAA 90 bp ATGGCTGTGGCTCTAAGTATAATCCTGCCTCTTGGAGCAGGCTGCAAAGCAGCACTCATGCTTCCTGGCTaGCACAGTTCCTCAGGACTT +
Preference number: 5 (lower is better)
Translates to: MAVALSIILPLGAGCKAALMLPG*HSSSGL
Trigger: AAGTCCTGAGGAACTGTGCAAGCCAGGAAGCATGAG...TGCTGCTTTGCAGCCTGCTCCAAGAGGCAGGATTATACTTAGAGCCACAGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS TCA 90 bp AAGAGACATGATGAAGAGCAATGCATCCCGAGCTTGCTGGCCTACTaGCCCCTCTCGGTGAATGAAGGGAATCAGAAGGGAGAAGATGAG +
Preference number: 5 (lower is better)
Translates to: KRHDEEQCIPSLLAY*PLSVNEGNQKGEDE
Trigger: CTCATCTTCTCCCTTCTGATTCCCTTCATTCACCGAGAGGGGTCAGTAGGCCAGCAAGCTCGGGATGCATTGCTCTTCATCATGTCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS CCA 90 bp GAAGAGCATGTGTTCTACGTAATTCTGCACGGCACTGGCCTCATCTaGAGGGATAGACCCATATTTTGCCTGGGTGTTCTTCAAGGGGTC +
Preference number: 5 (lower is better)
Translates to: EEHVFYVILHGTGLI*RDRPIFCLGVLQGV
Trigger: GACCCCTTGAAGAACACCCAGGCAAAATATGGGTCTATCCCTCCAGATGAGGCCAGTGCCGTGCAGAATTACGTAGAACACATGCTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CAA 90 bp AAGGGACAGATGATATGTGCTTTCGTGATGGAGGCAGGAGGAGCTCCATCTTTACCACAGTGGGGGTGGTaGTTCCTGAACAAGAGCTCA +
Preference number: 5 (lower is better)
Translates to: KGQMICAFVMEAGGAPSLPQWGW*FLNKSS
Trigger: TGAGCTCTTGTTCAGGAACAACCACCCCCACTGTGG...TAAAGATGGAGCTCCTCCTGCCTCCATCACGAAAGCACATATCATCTGTCCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CAA 90 bp TGGCCTCGAAGTTTCGGAAAGTACACACCCTCCTTCAGCTTGGAGTTGGTTAGTGAAGTTGGCAGCGCCTaGGTCTTCACTAGTGTGGAA +
Preference number: 5 (lower is better)
Translates to: WPRSFGKYTPSFSLELVSEVGSA*VFTSVE
Trigger: TTCCACACTAGTGAAGACCAAGGCGCTGCCAACTTC...ACTAACCAACTCCAAGCTGAAGGAGGGTGTGTACTTTCCGAAACTTCGAGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CAA 90 bp CTGGGGACGACACACGTCCTGGAAGTAAAATCCAAAGGGACAGATGATATGTGCGAAGTTGGCAGCGCCTaGGTCTTCACTAGTGTGGAA +
Preference number: 5 (lower is better)
Translates to: LGTTHVLEVKSKGTDDMCEVGSA*VFTSVE
Trigger: TTCCACACTAGTGAAGACCAAGGCGCTGCCAACTTC...GCACATATCATCTGTCCCTTTGGATTTTACTTCCAGGACGTGTGTCGTCCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CAA 90 bp GCCAAAATGCAGGAGGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTGAGAAGATGAGGAAGTaGGCAGCGCCTTGGTCTTCA +
Preference number: 5 (lower is better)
Translates to: AKMQEATGPFAQLQVYNLEKMRK*AAPWSS
Trigger: TGAAGACCAAGGCGCTGCCAACTTCCTCATCTTCTC...AAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCCTCCTGCATTTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CAA 90 bp ATGGCTGTGGCTCTAAGTATAATCCTGCCTCTTGGAGCAGGCTGCAAAGCAGCAGATGCTAACTCTGAGTaGGATTCTGGGGCTGCTTCA +
Preference number: 5 (lower is better)
Translates to: MAVALSIILPLGAGCKAADANSE*DSGAAS
Trigger: TGAAGCAGCCCCAGAATCCAACTCAGAGTTAGCATC...TGCTGCTTTGCAGCCTGCTCCAAGAGGCAGGATTATACTTAGAGCCACAGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CAA 90 bp GGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTCCTGTGCTGCTGAACCATCCAAAAGGTTCTaGCCACTTCCTGTCCTGGAA +
Preference number: 5 (lower is better)
Translates to: GNRTIRTVAGVQSSCAAEPSKRF*PLPVLE
Trigger: TTCCAGGACAGGAAGTGGCAAGAACCTTTTGGATGG...TTCAGCAGCACAGGAAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CAA 90 bp CTGGGGACGACACACGTCCTGGAAGTAAAATCCAAAGGGACAGATGATATGTGCAGGGCTGAAGCACTCTaGGAGGTCCATCCAAAAGGT +
Preference number: 5 (lower is better)
Translates to: LGTTHVLEVKSKGTDDMCRAEAL*EVHPKG
Trigger: ACCTTTTGGATGGACCTCCAAGAGTGCTTCAGCCCT...GCACATATCATCTGTCCCTTTGGATTTTACTTCCAGGACGTGTGTCGTCCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CAA 90 bp GGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTCCTGTGCTGCTGAAGGACCATTCGCACAGTaGCAGGTGTACAATCTTCCT +
Preference number: 5 (lower is better)
Translates to: GNRTIRTVAGVQSSCAAEGPFAQ*QVYNLP
Trigger: AGGAAGATTGTACACCTGCAACTGTGCGAATGGTCC...TTCAGCAGCACAGGAAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CAA 90 bp TATAGAACAGAGGCCAAAATGCAGGAGGCAACAGGACCATTCGCACAGTTGCAGTGTTATCGTGTGAGTTaGCTGCCAGCACCCCAGCAT +
Preference number: 5 (lower is better)
Translates to: YRTEAKMQEATGPFAQLQCYRVS*LPAPQH
Trigger: ATGCTGGGGTGCTGGCAGCAAACTCACACGATAACA...CTGCAACTGTGCGAATGGTCCTGTTGCCTCCTGCATTTTGGCCTCTGTTCTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CAA 90 bp CTGGGGACGACACACGTCCTGGAAGTAAAATCCAAAGGGACAGATGATATGTGCAAAGCAGGCTGCCGTTaGCAGCAAACCACACATGAC +
Preference number: 5 (lower is better)
Translates to: LGTTHVLEVKSKGTDDMCKAGCR*QQTTHD
Trigger: GTCATGTGTGGTTTGCTGCAAACGGCAGCCTGCTTT...GCACATATCATCTGTCCCTTTGGATTTTACTTCCAGGACGTGTGTCGTCCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CAA 90 bp TGGCCTCGAAGTTTCGGAAAGTACACACCCTCCTTCAGCTTGGAGTTGGTTAGTCCACAGGTGATGCCATaGCCATCTGTCTCAGGAATC +
Preference number: 5 (lower is better)
Translates to: WPRSFGKYTPSFSLELVSPQVMP*PSVSGI
Trigger: GATTCCTGAGACAGATGGCAATGGCATCACCTGTGG...ACTAACCAACTCCAAGCTGAAGGAGGGTGTGTACTTTCCGAAACTTCGAGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS TCA 90 bp TATCAGACATGTCCACACGGAAGAGCAGGTACTGCTGAGCTTGAATaGGGAGCCCTGGGAAGTCTCTCTCCACAGAAGCAAACTGTTCAA +
Preference number: 5 (lower is better)
Translates to: YQTCPHGRAGTAELE*GALGSLSPQKQTVQ
Trigger: TTGAACAGTTTGCTTCTGTGGAGAGAGACTTCCCAGGGCTCCTCATTCAAGCTCAGCAGTACCTGCTCTTCCGTGTGGACATGTCTGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS CCA 90 bp AACATCATCAGAGGCTTCAGAATGGGTTTGTGGTGCAGCAGAGGCTaGTGCGACTGGGTGACCAACATCTCATACATCTTTAGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: NIIRGFRMGLWCSRG*CDWVTNISYIFSCS
Trigger: TGAGCAGCTAAAGATGTATGAGATGTTGGTCACCCAGTCGCACCAGCCTCTGCTGCACCACAAACCCATTCTGAAGCCTCTGATGATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS CCA 90 bp AGCCGAAACGGGGTGTTGATTCGACTCGTGAGAGTGTCTAGGATGTaGACATTCTCGTGCTGGTGCAATAGGATAAAACGGAGGAAGATC +
Preference number: 5 (lower is better)
Translates to: SRNGVLIRLVRVSRM*TFSCWCNRIKRRKI
Trigger: GATCTTCCTCCGTTTTATCCTATTGCACCAGCACGAGAATGTCCACATCCTAGACACTCTCACGAGTCGAATCAACACCCCGTTTCGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CAA 90 bp CAGGTGACCTGTTTGCATTTACATCCAAGGTCCCAAAGTGGGCTGTACAGTTCCACAGCCTGCTGGAGTTaGCTTTCTGTCGAAACCGAT +
Preference number: 5 (lower is better)
Translates to: QVTCLHLHPRSQSGLYSSTACWS*LSVETD
Trigger: ATCGGTTTCGACAGAAAGCAAACTCCAGCAGGCTGT...GGAACTGTACAGCCCACTTTGGGACCTTGGATGTAAATGCAAACAGGTCACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CAA 90 bp AAAATTATCTGCATTCCAAATTCTCTCCAAGGACATCCGACTTCCCAGGCAGATTGTCTTCCTGGGGAGTaGTTGCGGGAGCCCGAACAC +
Preference number: 5 (lower is better)
Translates to: KIICIPNSLQGHPTSQADCLPGE*LREPEH
Trigger: GTGTTCGGGCTCCCGCAACAACTCCCCAGGAAGACA...ATCTGCCTGGGAAGTCGGATGTCCTTGGAGAGAATTTGGAATGCAGATAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CAA 90 bp TGGCCTCGAAGTTTCGGAAAGTACACACCCTCCTTCAGCTTGGAGTTGGTTAGTCCATCCAAAAGGTTCTaGCCACTTCCTGTCCTGGAA +
Preference number: 5 (lower is better)
Translates to: WPRSFGKYTPSFSLELVSPSKRF*PLPVLE
Trigger: TTCCAGGACAGGAAGTGGCAAGAACCTTTTGGATGG...ACTAACCAACTCCAAGCTGAAGGAGGGTGTGTACTTTCCGAAACTTCGAGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CAA 90 bp AAGGGACAGATGATATGTGCTTTCGTGATGGAGGCAGGAGGAGCTCCATCTTTAAGGGCTGAAGCACTCTaGGAGGTCCATCCAAAAGGT +
Preference number: 5 (lower is better)
Translates to: KGQMICAFVMEAGGAPSLRAEAL*EVHPKG
Trigger: ACCTTTTGGATGGACCTCCAAGAGTGCTTCAGCCCT...TAAAGATGGAGCTCCTCCTGCCTCCATCACGAAAGCACATATCATCTGTCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CAA 90 bp CTGGGGACGACACACGTCCTGGAAGTAAAATCCAAAGGGACAGATGATATGTGCCTCCAGGTGACCTGTTaGCATTTACATCCAAGGTCC +
Preference number: 5 (lower is better)
Translates to: LGTTHVLEVKSKGTDDMCLQVTC*HLHPRS
Trigger: GGACCTTGGATGTAAATGCAAACAGGTCACCTGGAG...GCACATATCATCTGTCCCTTTGGATTTTACTTCCAGGACGTGTGTCGTCCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CAA 90 bp TCGGAAGGCAGCATTTCCATGCAGAGTGAGTCGCCAGCAGGCACTTGGCTTTGCTTTTCTAATGGAGAGTaGTGGGCTGTGCAAATACAA +
Preference number: 5 (lower is better)
Translates to: SEGSISMQSESPAGTWLCFSNGE*WAVQIQ
Trigger: TTGTATTTGCACAGCCCACAACTCTCCATTAGAAAA...GCAAAGCCAAGTGCCTGCTGGCGACTCACTCTGCATGGAAATGCTGCCTTCCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CAA 90 bp AAGGGACAGATGATATGTGCTTTCGTGATGGAGGCAGGAGGAGCTCCATCTTTAGTTGCGTGGTTCATTTaGGACAGGCATGAGGAGGTG +
Preference number: 5 (lower is better)
Translates to: KGQMICAFVMEAGGAPSLVAWFI*DRHEEV
Trigger: CACCTCCTCATGCCTGTCCAAAATGAACCACGCAAC...TAAAGATGGAGCTCCTCCTGCCTCCATCACGAAAGCACATATCATCTGTCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS GCA 90 bp ATCATCAGAGGCTTCAGAATGGGTTTGTGGTGCAGCAGAGGCTGGTaGGACTGGGTGACCAACATCTCATACATCTTTAGCTGCTCAATT +
Preference number: 5 (lower is better)
Translates to: IIRGFRMGLWCSRGW*DWVTNISYIFSCSI
Trigger: AATTGAGCAGCTAAAGATGTATGAGATGTTGGTCACCCAGTCGCACCAGCCTCTGCTGCACCACAAACCCATTCTGAAGCCTCTGATGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS GCA 90 bp TGGACAAGAGAAGGAAGTAGAAGCCAGTCATCTTTCAGAAGGCAGTaGCATTCCTCGCCTTTCTCTTCTAGCTTTGTAGGCAGGGAAGAG +
Preference number: 5 (lower is better)
Translates to: WTREGSRSQSSFRRQ*HSSPFSSSFVGREE
Trigger: CTCTTCCCTGCCTACAAAGCTAGAAGAGAAAGGCGAGGAATGGCACTGCCTTCTGAAAGATGACTGGCTTCTACTTCCTTCTCTTGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS GCA 90 bp ATTCGACTCGTGAGAGTGTCTAGGATGTGGACATTCTCGTGCTGGTaGAATAGGATAAAACGGAGGAAGATCTCAAGTAGTGCTGGCTCG +
Preference number: 5 (lower is better)
Translates to: IRLVRVSRMWTFSCW*NRIKRRKISSSAGS
Trigger: CGAGCCAGCACTACTTGAGATCTTCCTCCGTTTTATCCTATTGCACCAGCACGAGAATGTCCACATCCTAGACACTCTCACGAGTCGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS CCA 90 bp AGAGGCTTCAGAATGGGTTTGTGGTGCAGCAGAGGCTGGTGCGACTaGGTGACCAACATCTCATACATCTTTAGCTGCTCAATTTTAGTC +
Preference number: 5 (lower is better)
Translates to: RGFRMGLWCSRGWCD*VTNISYIFSCSILV
Trigger: GACTAAAATTGAGCAGCTAAAGATGTATGAGATGTTGGTCACCCAGTCGCACCAGCCTCTGCTGCACCACAAACCCATTCTGAAGCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS CCA 90 bp GTCCACACGGAAGAGCAGGTACTGCTGAGCTTGAATGAGGAGCCCTaGGAAGTCTCTCTCCACAGAAGCAAACTGTTCAATCTTGTTTTT +
Preference number: 5 (lower is better)
Translates to: VHTEEQVLLSLNEEP*EVSLHRSKLFNLVF
Trigger: AAAAACAAGATTGAACAGTTTGCTTCTGTGGAGAGAGACTTCCCAGGGCTCCTCATTCAAGCTCAGCAGTACCTGCTCTTCCGTGTGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CAA 90 bp CTGGGGACGACACACGTCCTGGAAGTAAAATCCAAAGGGACAGATGATATGTGCAATATAATCCCTCTCTaGGTTCCCCAGCGTCAGAGT +
Preference number: 5 (lower is better)
Translates to: LGTTHVLEVKSKGTDDMCNIIPL*VPQRQS
Trigger: ACTCTGACGCTGGGGAACCAAGAGAGGGATTATATT...GCACATATCATCTGTCCCTTTGGATTTTACTTCCAGGACGTGTGTCGTCCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CAA 90 bp GCCAAAATGCAGGAGGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTAATATAATCCCTCTCTaGGTTCCCCAGCGTCAGAGT +
Preference number: 5 (lower is better)
Translates to: AKMQEATGPFAQLQVYNLNIIPL*VPQRQS
Trigger: ACTCTGACGCTGGGGAACCAAGAGAGGGATTATATT...AAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCCTCCTGCATTTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CAA 90 bp AAGGGACAGATGATATGTGCTTTCGTGATGGAGGCAGGAGGAGCTCCATCTTTAGATGCTAACTCTGAGTaGGATTCTGGGGCTGCTTCA +
Preference number: 5 (lower is better)
Translates to: KGQMICAFVMEAGGAPSLDANSE*DSGAAS
Trigger: TGAAGCAGCCCCAGAATCCAACTCAGAGTTAGCATC...TAAAGATGGAGCTCCTCCTGCCTCCATCACGAAAGCACATATCATCTGTCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CAA 90 bp CTAAACTCCCCGAAAGATGCCTGGAATGCATGTCGAAGTCATGCTGACAGGTCCGAGCTTCCATCACCTTaGTTGGGTTCTGAAATGACA +
Preference number: 5 (lower is better)
Translates to: LNSPKDAWNACRSHADRSELPSP*LGSEMT
Trigger: TGTCATTTCAGAACCCAACAAAGGTGATGGAAGCTC...GGACCTGTCAGCATGACTTCGACATGCATTCCAGGCATCTTTCGGGGAGTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS TCA 90 bp CCATCACATCATCCTGAAAGTCCGACTCTTCTATGTAGGACCCTTTaGAGAGCAGGAGGGCATTCTTCTTCATCTCCTGGATGTGTTTGG +
Preference number: 5 (lower is better)
Translates to: PSHHPESPTLLCRTL*RAGGHSSSSPGCVW
Trigger: CCAAACACATCCAGGAGATGAAGAAGAATGCCCTCCTGCTCTTCAAAGGGTCCTACATAGAAGAGTCGGACTTTCAGGATGATGTGATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS GCA 90 bp ACAATCATGCATGTTTCTGGGTCAACTCCCTGTAGGCTCACAGCCTaGTGGAGTTTGCTTTCTGTCGAAACCGATGACATCATAAGCCTT +
Preference number: 5 (lower is better)
Translates to: TIMHVSGSTPCRLTA*WSLLSVETDDIISL
Trigger: AAGGCTTATGATGTCATCGGTTTCGACAGAAAGCAAACTCCAGCAGGCTGTGAGCCTACAGGGAGTTGACCCAGAAACATGCATGATTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000435205.6
ENST00000503146.5
ENST00000505231.1
ENST00000512597.5
ENST00000513962.5
CDS CCA 90 bp ATCATGCATGTTTCTGGGTCAACTCCCTGTAGGCTCACAGCCTGCTaGAGTTTGCTTTCTGTCGAAACCGATGACATCATAAGCCTTCAT +
Preference number: 5 (lower is better)
Translates to: IMHVSGSTPCRLTAC*SLLSVETDDIISLH
Trigger: ATGAAGGCTTATGATGTCATCGGTTTCGACAGAAAGCAAACTCCAGCAGGCTGTGAGCCTACAGGGAGTTGACCCAGAAACATGCATGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000435205.6
ENST00000503146.5
ENST00000505231.1
ENST00000512597.5
ENST00000513962.5
CDS CCA 90 bp TTGATTCGACTCGTGAGAGTGTCTAGGATGTGGACATTCTCGTGCTaGTGCAATAGGATAAAACGGAGGAAGATCTCAAGTAGTGCTGGC +
Preference number: 5 (lower is better)
Translates to: LIRLVRVSRMWTFSC*CNRIKRRKISSSAG
Trigger: GCCAGCACTACTTGAGATCTTCCTCCGTTTTATCCTATTGCACCAGCACGAGAATGTCCACATCCTAGACACTCTCACGAGTCGAATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CAA 90 bp GGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTCCTGTGCTGCTGAATGCAGCATCTTTGGCTaGCTCTTCAATCAACAAGAA +
Preference number: 5 (lower is better)
Translates to: GNRTIRTVAGVQSSCAAECSIFG*LFNQQE
Trigger: TTCTTGTTGATTGAAGAGCAAGCCAAAGATGCTGCA...TTCAGCAGCACAGGAAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CAA 90 bp AAAATTATCTGCATTCCAAATTCTCTCCAAGGACATCCGACTTCCCAGGCAGATTTCAGGTTCCCTCTCTaGCTTTGGCTCCTTGGGCTC +
Preference number: 5 (lower is better)
Translates to: KIICIPNSLQGHPTSQADFRFPL*LWLLGL
Trigger: GAGCCCAAGGAGCCAAAGCAAGAGAGGGAACCTGAA...ATCTGCCTGGGAAGTCGGATGTCCTTGGAGAGAATTTGGAATGCAGATAATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CAA 90 bp GAGGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTCCTGTGCTGCTGGCAAACTGTTCAATCTaGTTTTTCACAGATGCAAGG +
Preference number: 5 (lower is better)
Translates to: EATGPFAQLQVYNLPVLLANCSI*FFTDAR
Trigger: CCTTGCATCTGTGAAAAACAAGATTGAACAGTTTGC...CAGCAGCACAGGAAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CAA 90 bp AGACAAACCTTCCAATTTCCTTCCAAACAGGCAGGCTCAAGCTCGTTACTTGCTCTCTGCTGTTTTTCTTaGGCATGTCCACGTCACTCC +
Preference number: 5 (lower is better)
Translates to: RQTFQFPSKQAGSSSLLALCCFS*ACPRHS
Trigger: GGAGTGACGTGGACATGCCAAAGAAAAACAGCAGAG...AGCAAGTAACGAGCTTGAGCCTGCCTGTTTGGAAGGAAATTGGAAGGTTTGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CAA 90 bp CTAAACTCCCCGAAAGATGCCTGGAATGCATGTCGAAGTCATGCTGACAGGTCCCTGTTTATCCAGTTATaGAGCTGCCAGGATAATCTG +
Preference number: 5 (lower is better)
Translates to: LNSPKDAWNACRSHADRSLFIQL*SCQDNL
Trigger: CAGATTATCCTGGCAGCTCAATAACTGGATAAACAG...GGACCTGTCAGCATGACTTCGACATGCATTCCAGGCATCTTTCGGGGAGTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CAA 90 bp CAGGTGACCTGTTTGCATTTACATCCAAGGTCCCAAAGTGGGCTGTACAGTTCCGAGAAAGGTAACCAGTaGCGTGGTTCATTTTGGACA +
Preference number: 5 (lower is better)
Translates to: QVTCLHLHPRSQSGLYSSEKGNQ*RGSFWT
Trigger: TGTCCAAAATGAACCACGCAACTGGTTACCTTTCTC...GGAACTGTACAGCCCACTTTGGGACCTTGGATGTAAATGCAAACAGGTCACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CAA 90 bp AAGGGACAGATGATATGTGCTTTCGTGATGGAGGCAGGAGGAGCTCCATCTTTATGCACCGGAGCACCTTaGTTCGGTATATATATGCCT +
Preference number: 5 (lower is better)
Translates to: KGQMICAFVMEAGGAPSLCTGAP*FGIYMP
Trigger: AGGCATATATATACCGAACAAAGGTGCTCCGGTGCA...TAAAGATGGAGCTCCTCCTGCCTCCATCACGAAAGCACATATCATCTGTCCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS GCA 90 bp CTCCATGATGTTCTCAGAGACCACAAATTCCAGAATCGGCCCCATTaGAGCATCTTTGGCTTGCTCTTCAATCAACAAGAAGAGCATGTG +
Preference number: 5 (lower is better)
Translates to: LHDVLRDHKFQNRPH*SIFGLLFNQQEEHV
Trigger: CACATGCTCTTCTTGTTGATTGAAGAGCAAGCCAAAGATGCTGCAATGGGGCCGATTCTGGAATTTGTGGTCTCTGAGAACATCATGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS GCA 90 bp GTGTTGATTCGACTCGTGAGAGTGTCTAGGATGTGGACATTCTCGTaGTGGTGCAATAGGATAAAACGGAGGAAGATCTCAAGTAGTGCT +
Preference number: 5 (lower is better)
Translates to: VLIRLVRVSRMWTFS*WCNRIKRRKISSSA
Trigger: AGCACTACTTGAGATCTTCCTCCGTTTTATCCTATTGCACCAGCACGAGAATGTCCACATCCTAGACACTCTCACGAGTCGAATCAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CAA 90 bp TTTAGTCTGGTCTACTGGTTCACCCTTCAGGGAGAAATCTCATTAAAATGTATGTGTGAATGGGGTGCTTaGAGTCCTCACGGGATGGCG +
Preference number: 5 (lower is better)
Translates to: FSLVYWFTLQGEISLKCMCEWGA*SPHGMA
Trigger: CGCCATCCCGTGAGGACTCAAAGCACCCCATTCACA...CATACATTTTAATGAGATTTCTCCCTGAAGGGTGAACCAGTAGACCAGACTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CAA 90 bp GGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTCCTGTGCTGCTGAAGCAAACTGTTCAATCTaGTTTTTCACAGATGCAAGG +
Preference number: 5 (lower is better)
Translates to: GNRTIRTVAGVQSSCAAEANCSI*FFTDAR
Trigger: CCTTGCATCTGTGAAAAACAAGATTGAACAGTTTGC...TTCAGCAGCACAGGAAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CAA 90 bp TATCCACAGGGCAAAAAGGGGCCTTGTTACAGGTGGGCCTTTCATAGACTTGTCGATATTTCTAAGGGCTaGCCGATTTACTTTAGGACC +
Preference number: 5 (lower is better)
Translates to: YPQGKKGPCYRWAFHRLVDISKG*PIYFRT
Trigger: GGTCCTAAAGTAAATCGGCAAGCCCTTAGAAATATC...GACAAGTCTATGAAAGGCCCACCTGTAACAAGGCCCCTTTTTGCCCTGTGGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CAA 90 bp CTAAATAACCCACTCTCAGTTATTTCACCCAGCCACATGGGTTTTCCTGTTCTCACACCCTCCTTCAGCTaGGAGTTGGTTAGTTCAGGA +
Preference number: 5 (lower is better)
Translates to: LNNPLSVISPSHMGFPVLTPSFS*ELVSSG
Trigger: TCCTGAACTAACCAACTCCAAGCTGAAGGAGGGTGT...GAGAACAGGAAAACCCATGTGGCTGGGTGAAATAACTGAGAGTGGGTTATTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CAA 90 bp CTTTACTCTTCCTTTATAGAACAGAGGCCAAAATGCAGGAGGCAACAGGACCATCTAGAAAGGAGCTGTTaGATCTCTGTCCAGGGTCAC +
Preference number: 5 (lower is better)
Translates to: LYSSFIEQRPKCRRQQDHLERSC*ISVQGH
Trigger: GTGACCCTGGACAGAGATCAAACAGCTCCTTTCTAG...ATGGTCCTGTTGCCTCCTGCATTTTGGCCTCTGTTCTATAAAGGAAGAGTAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CAA 90 bp TATCCACAGGGCAAAAAGGGGCCTTGTTACAGGTGGGCCTTTCATAGACTTGTCATTAAAATGTATGAGTaGGCACCACAGGTGATGCCA +
Preference number: 5 (lower is better)
Translates to: YPQGKKGPCYRWAFHRLVIKMYE*APQVMP
Trigger: TGGCATCACCTGTGGTGCCAACTCATACATTTTAAT...GACAAGTCTATGAAAGGCCCACCTGTAACAAGGCCCCTTTTTGCCCTGTGGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS GCA 90 bp AGAGGCTGGTGCGACTGGGTGACCAACATCTCATACATCTTTAGCTaGTCAATTTTAGTCTCATCAGTAAACTCCCTTCTCAAGCTCCAA +
Preference number: 5 (lower is better)
Translates to: RGWCDWVTNISYIFS*SILVSSVNSLLKLQ
Trigger: TTGGAGCTTGAGAAGGGAGTTTACTGATGAGACTAAAATTGAGCAGCTAAAGATGTATGAGATGTTGGTCACCCAGTCGCACCAGCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CAA 90 bp AAGGGACAGATGATATGTGCTTTCGTGATGGAGGCAGGAGGAGCTCCATCTTTAAAAATCTCAACTTCTTaGACGCTAACCTTCCAGGCA +
Preference number: 5 (lower is better)
Translates to: KGQMICAFVMEAGGAPSLKISTS*TLTFQA
Trigger: TGCCTGGAAGGTTAGCGTCAAAGAAGTTGAGATTTT...TAAAGATGGAGCTCCTCCTGCCTCCATCACGAAAGCACATATCATCTGTCCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CAA 90 bp AAAATTATCTGCATTCCAAATTCTCTCCAAGGACATCCGACTTCCCAGGCAGATACAGCCTGCTGGAGTTaGCTTTCTGTCGAAACCGAT +
Preference number: 5 (lower is better)
Translates to: KIICIPNSLQGHPTSQADTACWS*LSVETD
Trigger: ATCGGTTTCGACAGAAAGCAAACTCCAGCAGGCTGT...ATCTGCCTGGGAAGTCGGATGTCCTTGGAGAGAATTTGGAATGCAGATAATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CAA 90 bp TATAGAACAGAGGCCAAAATGCAGGAGGCAACAGGACCATTCGCACAGTTGCAGTGTCATGCATACACTTaGACCAGAGAATATAATCCC +
Preference number: 5 (lower is better)
Translates to: YRTEAKMQEATGPFAQLQCHAYT*TREYNP
Trigger: GGGATTATATTCTCTGGTCAAAGTGTATGCATGACA...CTGCAACTGTGCGAATGGTCCTGTTGCCTCCTGCATTTTGGCCTCTGTTCTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CAA 90 bp GCCAAAATGCAGGAGGCAACAGGACCATTCGCACAGTTGCAGGTGTACAATCTTTGTCATGCATACACTTaGACCAGAGAATATAATCCC +
Preference number: 5 (lower is better)
Translates to: AKMQEATGPFAQLQVYNLCHAYT*TREYNP
Trigger: GGGATTATATTCTCTGGTCAAAGTGTATGCATGACA...AAGATTGTACACCTGCAACTGTGCGAATGGTCCTGTTGCCTCCTGCATTTTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CAA 90 bp TCTCTAACTGGCTATTCCAGCACTCCCATTTCATGGTTGGGAAATTGTATTTTAGTTCCCTCTCTTGCTTaGGCTCCTTGGGCTCACTGT +
Preference number: 5 (lower is better)
Translates to: SLTGYSSTPISWLGNCILVPSLA*APWAHC
Trigger: ACAGTGAGCCCAAGGAGCCAAAGCAAGAGAGGGAAC...TAAAATACAATTTCCCAACCATGAAATGGGAGTGCTGGAATAGCCAGTTAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CAA 90 bp AAGGGACAGATGATATGTGCTTTCGTGATGGAGGCAGGAGGAGCTCCATCTTTACAGCTCTTTAATGATTaGGTCATACTGGGCAATGAG +
Preference number: 5 (lower is better)
Translates to: KGQMICAFVMEAGGAPSLQLFND*VILGNE
Trigger: CTCATTGCCCAGTATGACCAAATCATTAAAGAGCTG...TAAAGATGGAGCTCCTCCTGCCTCCATCACGAAAGCACATATCATCTGTCCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CAA 90 bp ATGGCTGTGGCTCTAAGTATAATCCTGCCTCTTGGAGCAGGCTGCAAAGCAGCATTTACAGATGTGGCGTaGGCATTTTATGACTTTGTA +
Preference number: 5 (lower is better)
Translates to: MAVALSIILPLGAGCKAAFTDVA*AFYDFV
Trigger: TACAAAGTCATAAAATGCCAACGCCACATCTGTAAA...TGCTGCTTTGCAGCCTGCTCCAAGAGGCAGGATTATACTTAGAGCCACAGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CAA 90 bp GAAATTCGCAAAGATGGCTCTGCTTATAAAGGGGCCTCAGTGAAATACAATTTTGAGAAGATGAGGAAGTaGGCAGCGCCTTGGTCTTCA +
Preference number: 5 (lower is better)
Translates to: EIRKDGSAYKGASVKYNFEKMRK*AAPWSS
Trigger: TGAAGACCAAGGCGCTGCCAACTTCCTCATCTTCTC...AAAATTGTATTTCACTGAGGCCCCTTTATAAGCAGAGCCATCTTTGCGAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CAA 90 bp GCTTTGCATTTAACATTCAGTCAAGACACTAAAACCTTACAAAACAAGAACCTCAGAGAGAGCGGACGCTaGGCTGGAAGACCATGTTGG +
Preference number: 5 (lower is better)
Translates to: ALHLTFSQDTKTLQNKNLRESGR*AGRPCW
Trigger: CCAACATGGTCTTCCAGCCAAGCGTCCGCTCTCTCT...GAGGTTCTTGTTTTGTAAGGTTTTAGTGTCTTGACTGAATGTTAAATGCAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CAA 90 bp CTGGGGACGACACACGTCCTGGAAGTAAAATCCAAAGGGACAGATGATATGTGCTTCATGGTTGGGAAATaGTATTTTACCACCCATGAA +
Preference number: 5 (lower is better)
Translates to: LGTTHVLEVKSKGTDDMCFMVGK*YFTTHE
Trigger: TTCATGGGTGGTAAAATACAATTTCCCAACCATGAA...GCACATATCATCTGTCCCTTTGGATTTTACTTCCAGGACGTGTGTCGTCCCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS GCA 90 bp AAACCTGGGGCTGCTGTCTTCAATAACCTACTGCTGGGTTGTATTTaGTCACTTCACTCTTCAGAGGAGCGGAAAGATTTTTCTAACATT +
Preference number: 5 (lower is better)
Translates to: KPGAAVFNNLLLGCI*SLHSSEERKDFSNI
Trigger: AATGTTAGAAAAATCTTTCCGCTCCTCTGAAGAGTGAAGTGAGCAAATACAACCCAGCAGTAGGTTATTGAAGACAGCAGCCCCAGGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000435205.6
ENST00000508198.5
ENST00000513086.5
ENST00000513962.5
CDS CCA 90 bp CATGACCTCTTCCACAGTCACCTTATGGAGAGCAGGAGCCAAGACTaGTACCAAAAATCCATTGTAAATGTAATTGACAAGCTGATTTCG +
Preference number: 5 (lower is better)
Translates to: HDLFHSHLMESRSQD*YQKSIVNVIDKLIS
Trigger: CGAAATCAGCTTGTCAATTACATTTACAATGGATTTTTGGTACCAGTCTTGGCTCCTGCTCTCCATAAGGTGACTGTGGAAGAGGTCATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CAA 90 bp CTTTACTCTTCCTTTATAGAACAGAGGCCAAAATGCAGGAGGCAACAGGACCATCAGCTCTTTAATGATTaGGTCATACTGGGCAATGAG +
Preference number: 5 (lower is better)
Translates to: LYSSFIEQRPKCRRQQDHQLFND*VILGNE
Trigger: CTCATTGCCCAGTATGACCAAATCATTAAAGAGCTG...ATGGTCCTGTTGCCTCCTGCATTTTGGCCTCTGTTCTATAAAGGAAGAGTAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CAA 90 bp TCTCTAACTGGCTATTCCAGCACTCCCATTTCATGGTTGGGAAATTGTATTTTATCCTTCAGCTTGGAGTaGGTTAGTTCAGGACACAGC +
Preference number: 5 (lower is better)
Translates to: SLTGYSSTPISWLGNCILSFSLE*VSSGHS
Trigger: GCTGTGTCCTGAACTAACCAACTCCAAGCTGAAGGA...TAAAATACAATTTCCCAACCATGAAATGGGAGTGCTGGAATAGCCAGTTAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CAA 90 bp CTAAATAACCCACTCTCAGTTATTTCACCCAGCCACATGGGTTTTCCTGTTCTCGCCAAACCTTGTAAGTaGATATCATCACTGCTGCTA +
Preference number: 5 (lower is better)
Translates to: LNNPLSVISPSHMGFPVLAKPCK*ISSLLL
Trigger: TAGCAGCAGTGATGATATCAACTTACAAGGTTTGGC...GAGAACAGGAAAACCCATGTGGCTGGGTGAAATAACTGAGAGTGGGTTATTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CAA 90 bp AAAATTATCTGCATTCCAAATTCTCTCCAAGGACATCCGACTTCCCAGGCAGATTGCAGCATCTTTGGCTaGCTCTTCAATCAACAAGAA +
Preference number: 5 (lower is better)
Translates to: KIICIPNSLQGHPTSQADCSIFG*LFNQQE
Trigger: TTCTTGTTGATTGAAGAGCAAGCCAAAGATGCTGCA...ATCTGCCTGGGAAGTCGGATGTCCTTGGAGAGAATTTGGAATGCAGATAATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CAA 90 bp TCTCTAACTGGCTATTCCAGCACTCCCATTTCATGGTTGGGAAATTGTATTTTACCCATTGCAGCATCTTaGGCTTGCTCTTCAATCAAC +
Preference number: 5 (lower is better)
Translates to: SLTGYSSTPISWLGNCILPIAAS*ACSSIN
Trigger: GTTGATTGAAGAGCAAGCCAAAGATGCTGCAATGGG...TAAAATACAATTTCCCAACCATGAAATGGGAGTGCTGGAATAGCCAGTTAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CAA 90 bp TCTCTAACTGGCTATTCCAGCACTCCCATTTCATGGTTGGGAAATTGTATTTTATTAATGGACAGCCTTTaGTGGGGCCCTTTTGAAGAG +
Preference number: 5 (lower is better)
Translates to: SLTGYSSTPISWLGNCILLMDSL*WGPFEE
Trigger: CTCTTCAAAAGGGCCCCACAAAAGGCTGTCCATTAA...TAAAATACAATTTCCCAACCATGAAATGGGAGTGCTGGAATAGCCAGTTAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS-3UTR CAA 90 bp GCTTTGCATTTAACATTCAGTCAAGACACTAAAACCTTACAAAACAAGAACCTCCCCATTGCAGCATCTTaGGCTTGCTCTTCAATCAAC +
Preference number: 5 (lower is better)
Translates to: ALHLTFSQDTKTLQNKNLPIAAS*ACSSIN
Trigger: GTTGATTGAAGAGCAAGCCAAAGATGCTGCAATGGG...GAGGTTCTTGTTTTGTAAGGTTTTAGTGTCTTGACTGAATGTTAAATGCAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS-3UTR CAA 90 bp GAAATTCGCAAAGATGGCTCTGCTTATAAAGGGGCCTCAGTGAAATACAATTTTTCTTTGGTGTCTTGCTaGGACTATGAAACACGAAAG +
Preference number: 5 (lower is better)
Translates to: EIRKDGSAYKGASVKYNFSLVSC*DYETRK
Trigger: CTTTCGTGTTTCATAGTCCAAGCAAGACACCAAAGA...AAAATTGTATTTCACTGAGGCCCCTTTATAAGCAGAGCCATCTTTGCGAATTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS TCA 90 bp GAAGTGGAAACATCAGCTCAAAGAGTAGGAATATCTGAAGGCTTTTaGTGTAAACGGACTCCTCAAAAGTTGTACTGCTTTAAACTCCAA +
Preference number: 5 (lower is better)
Translates to: EVETSAQRVGISEGF*CKRTPQKLYCFKLQ
Trigger: TTGGAGTTTAAAGCAGTACAACTTTTGAGGAGTCCGTTTACATCAAAAGCCTTCAGATATTCCTACTCTTTGAGCTGATGTTTCCACTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512597.5
CDS TCA 90 bp GCTAACCTTCCAGGCAGTTATAACGAAACATTCATAGTCAAACATTaGGTTCTCATGATTTCAAAAATGTCCTTCAACACCCAAGTGTAT +
Preference number: 5 (lower is better)
Translates to: ANLPGSYNETFIVKH*VLMISKMSFNTQVY
Trigger: ATACACTTGGGTGTTGAAGGACATTTTTGAAATCATGAGAACTCAATGTTTGACTATGAATGTTTCGTTATAACTGCCTGGAAGGTTAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000435205.6
ENST00000503146.5
ENST00000508198.5
ENST00000511501.5
ENST00000513962.5
CDS CAA 72 bp GGGAGCCAGCTGAGGTCCTGTCTTCCTGGGGAGTTGTaGCGGGAGCCCGAACACAGGGCAGGCCGAGCTCAC +
Preference number: 6 (lower is better)
Translates to: GSQLRSCLPGEL*REPEHRAGRAH
Trigger: GTGAGCTCGGCCTGCCCTGTGTTCGGGCTCCCGCAACAACTCCCCAGGAAGACAGGACCTCAGCTGGCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS CAA 90 bp GTCCTTTCTGGGAGCCAGCTGAGGTCCTGTCTTCCTGGGGAGTTGTaGCGGGAGCCCGAACACAGGGCAGGCCGAGCTCACACTGCCCTC +
Preference number: 6 (lower is better)
Translates to: VLSGSQLRSCLPGEL*REPEHRAGRAHTAL
Trigger: GAGGGCAGTGTGAGCTCGGCCTGCCCTGTGTTCGGGCTCCCGCAACAACTCCCCAGGAAGACAGGACCTCAGCTGGCTCCCAGAAAGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS CCA 72 bp TTCCTGGGCCAAGGCCGCCAGCTCCTTCAGGAACTCTaGGAAGAGGGCAGCAGCCAGCATGGGGTTCCTCAC +
Preference number: 6 (lower is better)
Translates to: FLGQGRQLLQEL*EEGSSQHGVPH
Trigger: GTGAGGAACCCCATGCTGGCTGCTGCCCTCTTCCCAGAGTTCCTGAAGGAGCTGGCGGCCTTGGCCCAGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS CAA 90 bp CTTGTCCTTTCTGGGAGCCAGCTGAGGTCCTGTCTTCCTGGGGAGTaGTTGCGGGAGCCCGAACACAGGGCAGGCCGAGCTCACACTGCC +
Preference number: 6 (lower is better)
Translates to: LVLSGSQLRSCLPGE*LREPEHRAGRAHTA
Trigger: GGCAGTGTGAGCTCGGCCTGCCCTGTGTTCGGGCTCCCGCAACAACTCCCCAGGAAGACAGGACCTCAGCTGGCTCCCAGAAAGGACAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS GCA 72 bp CATCATACAGGGCGGACCAGACACGGCAGTCCCTCATaGAGCGGAGGATGTTGGTGTGGGCCTCCCACAGGT +
Preference number: 6 (lower is better)
Translates to: HHTGRTRHGSPS*SGGCWCGPPTG
Trigger: ACCTGTGGGAGGCCCACACCAACATCCTCCGCTGCATGAGGGACTGCCGTGTCTGGTCCGCCCTGTATGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS CCA 72 bp CAGGCCGAGCTCACACTGCCCTCCTCCGTCAGACTCTaGAGAAACATCTCAGGGTCGGGGGAGTCGCCATCA +
Preference number: 6 (lower is better)
Translates to: QAELTLPSSVRL*RNISGSGESPS
Trigger: TGATGGCGACTCCCCCGACCCTGAGATGTTTCTCCAGAGTCTGACGGAGGAGGGCAGTGTGAGCTCGGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS CCA 72 bp TGTCCTTTCTGGGAGCCAGCTGAGGTCCTGTCTTCCTaGGGAGTTGTTGCGGGAGCCCGAACACAGGGCAGG +
Preference number: 6 (lower is better)
Translates to: CPFWEPAEVLSS*GVVAGARTQGR
Trigger: CCTGCCCTGTGTTCGGGCTCCCGCAACAACTCCCCAGGAAGACAGGACCTCAGCTGGCTCCCAGAAAGGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS TCA 72 bp GTGCTGAGGAGGGGGCCGTTGTTGATGGGGACACTCTaGACTTCAGCCTGGGCTTCAGCTGGTGGCCTAGCA +
Preference number: 6 (lower is better)
Translates to: VLRRGPLLMGTL*TSAWASAGGLA
Trigger: TGCTAGGCCACCAGCTGAAGCCCAGGCTGAAGTTCAGAGTGTCCCCATCAACAACGGCCCCCTCCTCAGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS CCA 72 bp TGGTCATACTGGGCAATGAGCTCCTCGCTCTCCGGGTaGGCGGCTGTCAGGTTAGAGCTGTGCTCTGCCTCA +
Preference number: 6 (lower is better)
Translates to: WSYWAMSSSLSG*AAVRLELCSAS
Trigger: TGAGGCAGAGCACAGCTCTAACCTGACAGCCGCCCACCCGGAGAGCGAGGAGCTCATTGCCCAGTATGACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS TCA 72 bp GATGTCCAGGGCTTTCCCATACTCCACAATGCAGGCTaGCTCGGAGAACGCTTCGGGGAATGGCCGCTCCAC +
Preference number: 6 (lower is better)
Translates to: DVQGFPILHNAG*LGERFGEWPLH
Trigger: GTGGAGCGGCCATTCCCCGAAGCGTTCTCCGAGTCAGCCTGCATTGTGGAGTATGGGAAAGCCCTGGACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS TCA 72 bp AGCTCTGTCTGGCTCTTGTCCTTTCTGGGAGCCAGCTaGGGTCCTGTCTTCCTGGGGAGTTGTTGCGGGAGC +
Preference number: 6 (lower is better)
Translates to: SSVWLLSFLGAS*GPVFLGSCCGS
Trigger: GCTCCCGCAACAACTCCCCAGGAAGACAGGACCTCAGCTGGCTCCCAGAAAGGACAAGAGCCAGACAGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS CAA 90 bp CTGTTCCATCAAGCCCTCGGCGCCGGAATCCAGCTCTTTAATGATTaGGTCATACTGGGCAATGAGCTCCTCGCTCTCCGGGTGGGCGGC +
Preference number: 6 (lower is better)
Translates to: LFHQALGAGIQLFND*VILGNELLALRVGG
Trigger: GCCGCCCACCCGGAGAGCGAGGAGCTCATTGCCCAGTATGACCAAATCATTAAAGAGCTGGATTCCGGCGCCGAGGGCTTGATGGAACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS TCA 72 bp ACTACGCTGATGAATGGGCCTGTGAATGGGGTGCTTTaGGTCCTCACGGGATGGCGACTGGCAAAGGCAGCC +
Preference number: 6 (lower is better)
Translates to: TTLMNGPVNGVL*VLTGWRLAKAA
Trigger: GGCTGCCTTTGCCAGTCGCCATCCCGTGAGGACTCAAAGCACCCCATTCACAGGCCCATTCATCAGCGTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS CCA 72 bp GCGCCGGAATCCAGCTCTTTAATGATTTGGTCATACTaGGCAATGAGCTCCTCGCTCTCCGGGTGGGCGGCT +
Preference number: 6 (lower is better)
Translates to: APESSSLMIWSY*AMSSSLSGWAA
Trigger: AGCCGCCCACCCGGAGAGCGAGGAGCTCATTGCCCAGTATGACCAAATCATTAAAGAGCTGGATTCCGGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS CAA 72 bp GACTACGCTGATGAATGGGCCTGTGAATGGGGTGCTTaGAGTCCTCACGGGATGGCGACTGGCAAAGGCAGC +
Preference number: 6 (lower is better)
Translates to: DYADEWACEWGA*SPHGMATGKGS
Trigger: GCTGCCTTTGCCAGTCGCCATCCCGTGAGGACTCAAAGCACCCCATTCACAGGCCCATTCATCAGCGTAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS CCA 72 bp CATCCCATTCCAGCTCTGTCTGGCTCTTGTCCTTTCTaGGAGCCAGCTGAGGTCCTGTCTTCCTGGGGAGTT +
Preference number: 6 (lower is better)
Translates to: HPIPALSGSCPF*EPAEVLSSWGV
Trigger: AACTCCCCAGGAAGACAGGACCTCAGCTGGCTCCCAGAAAGGACAAGAGCCAGACAGAGCTGGAATGGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS CAA 90 bp CCTCAGCCACCTTGGTTCTGTGGGTCAGGAAGGGCTGAAGCACTCTaGGAGGTCCATCCAAAAGGTTCTTGCCACTTCCTGTCCTGGAAG +
Preference number: 6 (lower is better)
Translates to: PQPPWFCGSGRAEAL*EVHPKGSCHFLSWK
Trigger: CTTCCAGGACAGGAAGTGGCAAGAACCTTTTGGATGGACCTCCAAGAGTGCTTCAGCCCTTCCTGACCCACAGAACCAAGGTGGCTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS TCA 72 bp CTCAAACTCAGGAGTGCCCGGGAAGAATGTAGGTCGTaGGAAGGTCGGAGCGCAACTTTTCGAAGGTGCGTC +
Preference number: 6 (lower is better)
Translates to: LKLRSAREECRS*EGRSATFRRCV
Trigger: GACGCACCTTCGAAAAGTTGCGCTCCGACCTTCTCACGACCTACATTCTTCCCGGGCACTCCTGAGTTTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435205.6
CDS TCA 72 bp GCCTCAGCCACCTTGGTTCTGTGGGTCAGGAAGGGCTaGAGCACTCTTGGAGGTCCATCCAAAAGGTTCTTG +
Preference number: 6 (lower is better)
Translates to: ASATLVLWVRKG*STLGGPSKRFL
Trigger: CAAGAACCTTTTGGATGGACCTCCAAGAGTGCTTCAGCCCTTCCTGACCCACAGAACCAAGGTGGCTGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS CCA 72 bp CTCAGCAACATCATCAGAGGCTTCAGAATGGGTTTGTaGTGCAGCAGAGGCTGGTGCGACTGGGTGACCAAC +
Preference number: 6 (lower is better)
Translates to: LSNIIRGFRMGL*CSRGWCDWVTN
Trigger: GTTGGTCACCCAGTCGCACCAGCCTCTGCTGCACCACAAACCCATTCTGAAGCCTCTGATGATGTTGCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS CCA 72 bp CGCTGGAGCAGCAGACAGGAGTCAAGGCGAGAAGCTTaGCCGCAGAAACAGAGTAACAGTCTCTCTCCTTCA +
Preference number: 6 (lower is better)
Translates to: RWSSRQESRREA*PQKQSNSLSPS
Trigger: TGAAGGAGAGAGACTGTTACTCTGTTTCTGCGGCCAAGCTTCTCGCCTTGACTCCTGTCTGCTGCTCCAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS TCA 72 bp GGTTCCCTCTCTTGCTTTGGCTCCTTGGGCTCACTGTaGAACGGGTCTGAATTGTCCCTATTCCACTCCTCC +
Preference number: 6 (lower is better)
Translates to: GSLSCFGSLGSL*NGSELSLFHSS
Trigger: GGAGGAGTGGAATAGGGACAATTCAGACCCGTTTCACAGTGAGCCCAAGGAGCCAAAGCAAGAGAGGGAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS GCA 72 bp GGCACTGGCCTCATCTGGAGGGATAGACCCATATTTTaGCTGGGTGTTCTTCAAGGGGTCGTGCTTCTCCAA +
Preference number: 6 (lower is better)
Translates to: GTGLIWRDRPIF*LGVLQGVVLLQ
Trigger: TTGGAGAAGCACGACCCCTTGAAGAACACCCAGGCAAAATATGGGTCTATCCCTCCAGATGAGGCCAGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS CCA 72 bp AACAAGAGCTCAGCAACATCATCAGAGGCTTCAGAATaGGTTTGTGGTGCAGCAGAGGCTGGTGCGACTGGG +
Preference number: 6 (lower is better)
Translates to: NKSSATSSEASE*VCGAAEAGATG
Trigger: CCCAGTCGCACCAGCCTCTGCTGCACCACAAACCCATTCTGAAGCCTCTGATGATGTTGCTGAGCTCTTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS CCA 72 bp GGGCTGCTTCAGGTTCCCTCTCTTGCTTTGGCTCCTTaGGCTCACTGTGAAACGGGTCTGAATTGTCCCTAT +
Preference number: 6 (lower is better)
Translates to: GLLQVPSLALAP*AHCETGLNCPY
Trigger: ATAGGGACAATTCAGACCCGTTTCACAGTGAGCCCAAGGAGCCAAAGCAAGAGAGGGAACCTGAAGCAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS CAA 72 bp CCTTGGTTCTGTGGGTCAGGAAGGGCTGAAGCACTCTaGGAGGTCCATCCAAAAGGTTCTTGCCACTTCCTG +
Preference number: 6 (lower is better)
Translates to: PWFCGSGRAEAL*EVHPKGSCHFL
Trigger: CAGGAAGTGGCAAGAACCTTTTGGATGGACCTCCAAGAGTGCTTCAGCCCTTCCTGACCCACAGAACCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS CAA 90 bp CCTGAACAAGAGCTCAGCAACATCATCAGAGGCTTCAGAATGGGTTaGTGGTGCAGCAGAGGCTGGTGCGACTGGGTGACCAACATCTCA +
Preference number: 6 (lower is better)
Translates to: PEQELSNIIRGFRMG*WCSRGWCDWVTNIS
Trigger: TGAGATGTTGGTCACCCAGTCGCACCAGCCTCTGCTGCACCACAAACCCATTCTGAAGCCTCTGATGATGTTGCTGAGCTCTTGTTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS TCA 72 bp AACCAGCTTCTCCTCCACAGTGGGGGTGGTTGTTCCTaGACAAGAGCTCAGCAACATCATCAGAGGCTTCAG +
Preference number: 6 (lower is better)
Translates to: NQLLLHSGGGCS*TRAQQHHQRLQ
Trigger: CTGAAGCCTCTGATGATGTTGCTGAGCTCTTGTTCAGGAACAACCACCCCCACTGTGGAGGAGAAGCTGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS CCA 72 bp CTTGGTTCTGTGGGTCAGGAAGGGCTGAAGCACTCTTaGAGGTCCATCCAAAAGGTTCTTGCCACTTCCTGT +
Preference number: 6 (lower is better)
Translates to: LGSVGQEGLKHS*RSIQKVLATSC
Trigger: ACAGGAAGTGGCAAGAACCTTTTGGATGGACCTCCAAGAGTGCTTCAGCCCTTCCTGACCCACAGAACCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS CAA 72 bp GTAGGACAACCAGCTTCTCCTCCACAGTGGGGGTGGTaGTTCCTGAACAAGAGCTCAGCAACATCATCAGAG +
Preference number: 6 (lower is better)
Translates to: VGQPASPPQWGW*FLNKSSATSSE
Trigger: CTCTGATGATGTTGCTGAGCTCTTGTTCAGGAACAACCACCCCCACTGTGGAGGAGAAGCTGGTTGTCCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS CAA 90 bp GGTCATATCAGACATGTCCACACGGAAGAGCAGGTACTGCTGAGCTaGAATGAGGAGCCCTGGGAAGTCTCTCTCCACAGAAGCAAACTG +
Preference number: 6 (lower is better)
Translates to: GHIRHVHTEEQVLLS*NEEPWEVSLHRSKL
Trigger: CAGTTTGCTTCTGTGGAGAGAGACTTCCCAGGGCTCCTCATTCAAGCTCAGCAGTACCTGCTCTTCCGTGTGGACATGTCTGATATGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS GCA 72 bp CATGTTTCTGGGTCAACTCCCTGTAGGCTCACAGCCTaGTGGAGTTTGCTTTCTGTCGAAACCGATGACATC +
Preference number: 6 (lower is better)
Translates to: HVSGSTPCRLTA*WSLLSVETDDI
Trigger: GATGTCATCGGTTTCGACAGAAAGCAAACTCCAGCAGGCTGTGAGCCTACAGGGAGTTGACCCAGAAACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000435205.6
ENST00000503146.5
ENST00000505231.1
ENST00000512597.5
ENST00000513962.5
CDS GCA 72 bp AACGGAGGAAGATCTCAAGTAGTGCTGGCTCGGAGATaGTACGCAGGAAAAGGTCCAGATATGCAGTTGTGG +
Preference number: 6 (lower is better)
Translates to: NGGRSQVVLARR*YAGKGPDMQLW
Trigger: CCACAACTGCATATCTGGACCTTTTCCTGCGTAGCATCTCCGAGCCAGCACTACTTGAGATCTTCCTCCGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS CCA 72 bp CTGGCCTCATCTGGAGGGATAGACCCATATTTTGCCTaGGTGTTCTTCAAGGGGTCGTGCTTCTCCAAGATT +
Preference number: 6 (lower is better)
Translates to: LASSGGIDPYFA*VFFKGSCFSKI
Trigger: AATCTTGGAGAAGCACGACCCCTTGAAGAACACCCAGGCAAAATATGGGTCTATCCCTCCAGATGAGGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS CCA 72 bp AGAATGGGTTTGTGGTGCAGCAGAGGCTGGTGCGACTaGGTGACCAACATCTCATACATCTTTAGCTGCTCA +
Preference number: 6 (lower is better)
Translates to: RMGLWCSRGWCD*VTNISYIFSCS
Trigger: TGAGCAGCTAAAGATGTATGAGATGTTGGTCACCCAGTCGCACCAGCCTCTGCTGCACCACAAACCCATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS CAA 72 bp AATGCCAGAGACACCACACAAAGCCGAAACGGGGTGTaGATTCGACTCGTGAGAGTGTCTAGGATGTGGACA +
Preference number: 6 (lower is better)
Translates to: NARDTTQSRNGV*IRLVRVSRMWT
Trigger: TGTCCACATCCTAGACACTCTCACGAGTCGAATCAACACCCCGTTTCGGCTTTGTGTGGTGTCTCTGGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS TCA 72 bp TGGGTTTGTGGTGCAGCAGAGGCTGGTGCGACTGGGTaGCCAACATCTCATACATCTTTAGCTGCTCAATTT +
Preference number: 6 (lower is better)
Translates to: WVCGAAEAGATG*PTSHTSLAAQF
Trigger: AAATTGAGCAGCTAAAGATGTATGAGATGTTGGTCACCCAGTCGCACCAGCCTCTGCTGCACCACAAACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS CCA 72 bp GTGTTCTACGTAATTCTGCACGGCACTGGCCTCATCTaGAGGGATAGACCCATATTTTGCCTGGGTGTTCTT +
Preference number: 6 (lower is better)
Translates to: VFYVILHGTGLI*RDRPIFCLGVL
Trigger: AAGAACACCCAGGCAAAATATGGGTCTATCCCTCCAGATGAGGCCAGTGCCGTGCAGAATTACGTAGAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS CCA 72 bp GGGGTGTTGATTCGACTCGTGAGAGTGTCTAGGATGTaGACATTCTCGTGCTGGTGCAATAGGATAAAACGG +
Preference number: 6 (lower is better)
Translates to: GVLIRLVRVSRM*TFSCWCNRIKR
Trigger: CCGTTTTATCCTATTGCACCAGCACGAGAATGTCCACATCCTAGACACTCTCACGAGTCGAATCAACACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS CCA 72 bp GAAGAGCAGGTACTGCTGAGCTTGAATGAGGAGCCCTaGGAAGTCTCTCTCCACAGAAGCAAACTGTTCAAT +
Preference number: 6 (lower is better)
Translates to: EEQVLLSLNEEP*EVSLHRSKLFN
Trigger: ATTGAACAGTTTGCTTCTGTGGAGAGAGACTTCCCAGGGCTCCTCATTCAAGCTCAGCAGTACCTGCTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS GCA 72 bp GAAGGAAGTAGAAGCCAGTCATCTTTCAGAAGGCAGTaGCATTCCTCGCCTTTCTCTTCTAGCTTTGTAGGC +
Preference number: 6 (lower is better)
Translates to: EGSRSQSSFRRQ*HSSPFSSSFVG
Trigger: GCCTACAAAGCTAGAAGAGAAAGGCGAGGAATGGCACTGCCTTCTGAAAGATGACTGGCTTCTACTTCCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS GCA 72 bp CGACTCGTGAGAGTGTCTAGGATGTGGACATTCTCGTaGTGGTGCAATAGGATAAAACGGAGGAAGATCTCA +
Preference number: 6 (lower is better)
Translates to: RLVRVSRMWTFS*WCNRIKRRKIS
Trigger: TGAGATCTTCCTCCGTTTTATCCTATTGCACCAGCACGAGAATGTCCACATCCTAGACACTCTCACGAGTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS CAA 90 bp CATGTTTCTGGGTCAACTCCCTGTAGGCTCACAGCCTGCTGGAGTTaGCTTTCTGTCGAAACCGATGACATCATAAGCCTTCATAAATCA +
Preference number: 6 (lower is better)
Translates to: HVSGSTPCRLTACWS*LSVETDDIISLHKS
Trigger: TGATTTATGAAGGCTTATGATGTCATCGGTTTCGACAGAAAGCAAACTCCAGCAGGCTGTGAGCCTACAGGGAGTTGACCCAGAAACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000435205.6
ENST00000503146.5
ENST00000505231.1
ENST00000512597.5
ENST00000513962.5
CDS CCA 72 bp CTCGTGAGAGTGTCTAGGATGTGGACATTCTCGTGCTaGTGCAATAGGATAAAACGGAGGAAGATCTCAAGT +
Preference number: 6 (lower is better)
Translates to: LVRVSRMWTFSC*CNRIKRRKISS
Trigger: ACTTGAGATCTTCCTCCGTTTTATCCTATTGCACCAGCACGAGAATGTCCACATCCTAGACACTCTCACGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS TCA 72 bp AAAATGGATGGATCTTTGGCAAGAATGGAACAGAGCTaGTTGAGTAGGACAACCAGCTTCTCCTCCACAGTG +
Preference number: 6 (lower is better)
Translates to: KMDGSLARMEQS*LSRTTSFSSTV
Trigger: CACTGTGGAGGAGAAGCTGGTTGTCCTACTCAATCAGCTCTGTTCCATTCTTGCCAAAGATCCATCCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS GCA 72 bp GTGAGAGTGTCTAGGATGTGGACATTCTCGTGCTGGTaGAATAGGATAAAACGGAGGAAGATCTCAAGTAGT +
Preference number: 6 (lower is better)
Translates to: VRVSRMWTFSCW*NRIKRRKISSS
Trigger: ACTACTTGAGATCTTCCTCCGTTTTATCCTATTGCACCAGCACGAGAATGTCCACATCCTAGACACTCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS CAA 72 bp ACCACAAATTCCAGAATCGGCCCCATTGCAGCATCTTaGGCTTGCTCTTCAATCAACAAGAAGAGCATGTGT +
Preference number: 6 (lower is better)
Translates to: TTNSRIGPIAAS*ACSSINKKSMC
Trigger: ACACATGCTCTTCTTGTTGATTGAAGAGCAAGCCAAAGATGCTGCAATGGGGCCGATTCTGGAATTTGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS CAA 72 bp TGTTCTCAGAGACCACAAATTCCAGAATCGGCCCCATaGCAGCATCTTTGGCTTGCTCTTCAATCAACAAGA +
Preference number: 6 (lower is better)
Translates to: CSQRPQIPESAP*QHLWLALQSTR
Trigger: TCTTGTTGATTGAAGAGCAAGCCAAAGATGCTGCAATGGGGCCGATTCTGGAATTTGTGGTCTCTGAGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS GCA 72 bp GCTGCTGTCTTCAATAACCTACTGCTGGGTTGTATTTaGTCACTTCACTCTTCAGAGGAGCGGAAAGATTTT +
Preference number: 6 (lower is better)
Translates to: AAVFNNLLLGCI*SLHSSEERKDF
Trigger: AAAATCTTTCCGCTCCTCTGAAGAGTGAAGTGAGCAAATACAACCCAGCAGTAGGTTATTGAAGACAGCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000435205.6
ENST00000508198.5
ENST00000513086.5
ENST00000513962.5
CDS CAA 72 bp AAATTCCAGAATCGGCCCCATTGCAGCATCTTTGGCTaGCTCTTCAATCAACAAGAAGAGCATGTGTTCTAC +
Preference number: 6 (lower is better)
Translates to: KFQNRPHCSIFG*LFNQQEEHVFY
Trigger: GTAGAACACATGCTCTTCTTGTTGATTGAAGAGCAAGCCAAAGATGCTGCAATGGGGCCGATTCTGGAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS TCA 72 bp AAGTGTATCACCAGTAACTGTAGCCACAAGGTAGAATaGGAGCCAGAAGAGAAGTGTTGTAGATGTTCAGCT +
Preference number: 6 (lower is better)
Translates to: KCITSNCSHKVE*EPEEKCCRCSA
Trigger: AGCTGAACATCTACAACACTTCTCTTCTGGCTCTCATTCTACCTTGTGGCTACAGTTACTGGTGATACACTT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513962.5
CDS GCA 72 bp TGCGACTGGGTGACCAACATCTCATACATCTTTAGCTaGTCAATTTTAGTCTCATCAGTAAACTCCCTTCTC +
Preference number: 6 (lower is better)
Translates to: CDWVTNISYIFS*SILVSSVNSLL
Trigger: GAGAAGGGAGTTTACTGATGAGACTAAAATTGAGCAGCTAAAGATGTATGAGATGTTGGTCACCCAGTCGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435205.6
ENST00000505231.1
CDS CCA 72 bp CACTCTTCAGAGGAGCGGAAAGATTTTTCTAACATTTaGCTCTGCTGGAAACCCCTAGAAGAAGACTTTAAA +
Preference number: 6 (lower is better)
Translates to: HSSEERKDFSNI*LCWKPLEEDFK
Trigger: TTTAAAGTCTTCTTCTAGGGGTTTCCAGCAGAGCCAAATGTTAGAAAAATCTTTCCGCTCCTCTGAAGAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000435205.6
ENST00000508198.5
ENST00000513086.5
ENST00000513962.5
CDS TCA 72 bp ACATCAGCTCAAAGAGTAGGAATATCTGAAGGCTTTTaGTGTAAACGGACTCCTCAAAAGTTGTACTGCTTT +
Preference number: 6 (lower is better)
Translates to: TSAQRVGISEGF*CKRTPQKLYCF
Trigger: AAAGCAGTACAACTTTTGAGGAGTCCGTTTACATCAAAAGCCTTCAGATATTCCTACTCTTTGAGCTGATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512597.5