Pregenerated sensors for FAM157C (Homo sapiens)
Ensembl gene IDs: ENSG00000260528Ensembl transcript IDs: ENST00000563357.1, ENST00000570230.1, ENST00000660047.1, ENST00000660257.1, ENST00000660322.1, ENST00000663989.1, ENST00000667258.1
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CCCTTCACAGAGACGGGACGGGGGAAGAAATTTCAAATTCTCTCATaGCAAGGTTGCTTCCCTTGGCAGCCAGCCCCACTGAGGCTGTCC | + |
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Preference number: 5 (lower is better) Translates to: PFTETGRGKKFQILS*QGCFPWQPAPLRLS Trigger: GGACAGCCTCAGTGGGGCTGGCTGCCAAGGGAAGCAACCTTGTCATGAGAGAATTTGAAATTTCTTCCCCCGTCCCGTCTCTGTGAAGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000663989.1 |
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| CDS GCA 90 bp | GCACCACCACGGGCAGAGCCAGGTTGTAAACTGACTGTTGTCTGCTaGCAATCTACTGGTGGGGGAGAGATATGGAAGTGCCAGTTTGTT | + |
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Preference number: 5 (lower is better) Translates to: APPRAEPGCKLTVVC*QSTGGGEIWKCQFV Trigger: AACAAACTGGCACTTCCATATCTCTCCCCCACCAGTAGATTGGCAGCAGACAACAGTCAGTTTACAACCTGGCTCTGCCCGTGGTGGTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000663989.1 |
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| CDS GCA 90 bp | CTAGCACCACCACGGGCAGAGCCAGGTTGTAAACTGACTGTTGTCTaGTGCCAATCTACTGGTGGGGGAGAGATATGGAAGTGCCAGTTT | + |
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Preference number: 5 (lower is better) Translates to: LAPPRAEPGCKLTVV*CQSTGGGEIWKCQF Trigger: AAACTGGCACTTCCATATCTCTCCCCCACCAGTAGATTGGCAGCAGACAACAGTCAGTTTACAACCTGGCTCTGCCCGTGGTGGTGCTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000663989.1 |
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| CDS TCA 90 bp | AAAGAAGACCCCATCTGGCCAACATGGCCAACCTGGCCACCACGGTaGAACTCTGACTCTACAAAAATGATCTGGGCATGGGTGACATGC | + |
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Preference number: 5 (lower is better) Translates to: KEDPIWPTWPTWPPR*NSDSTKMIWAWVTC Trigger: GCATGTCACCCATGCCCAGATCATTTTTGTAGAGTCAGAGTTTCACCGTGGTGGCCAGGTTGGCCATGTTGGCCAGATGGGGTCTTCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000570230.1 |
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| CDS CCA 90 bp | GTACCAGCTGCGTGTCCTACAGTGCAATCCAATTGTGACAGTAAATaGAGAAAGCATCAGACCCCACAGGCTAAGGGCTCAGTCCTAGGA | + |
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Preference number: 5 (lower is better) Translates to: VPAACPTVQSNCDSK*RKHQTPQAKGSVLG Trigger: TCCTAGGACTGAGCCCTTAGCCTGTGGGGTCTGATGCTTTCTCCATTTACTGTCACAATTGGATTGCACTGTAGGACACGCAGCTGGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663989.1 |
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| CDS TCA 90 bp | TGTCCTTTATTACACAGGCAGATTGGTTACGTCTGTGGCCATAGGTaGTCAACTCAACCATCAGCACCTCTCCCCTTCACAGAGACGGGA | + |
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Preference number: 5 (lower is better) Translates to: CPLLHRQIGYVCGHR*STQPSAPLPFTETG Trigger: TCCCGTCTCTGTGAAGGGGAGAGGTGCTGATGGTTGAGTTGATCACCTATGGCCACAGACGTAACCAATCTGCCTGTGTAATAAAGGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663989.1 |
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| CDS GCA 90 bp | GATATGATCCTCCCAGTATCTCTTGTGTTGGGAGAGCAACACAGATaGTCTCCCAACCCTGTCCTTTATTACACAGGCAGATTGGTTACG | + |
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Preference number: 5 (lower is better) Translates to: DMILPVSLVLGEQHR*SPNPVLYYTGRLVT Trigger: CGTAACCAATCTGCCTGTGTAATAAAGGACAGGGTTGGGAGAGCATCTGTGTTGCTCTCCCAACACAAGAGATACTGGGAGGATCATATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663989.1 |
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| CDS CCA 90 bp | AGATGCTCGAACTTGTCCTGCAGTCACGTTTCGCTGTCACCCCTCTaGAATCCACGTATACGAAAATTCCAAATGTTAGTTGGGCATAGT | + |
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Preference number: 5 (lower is better) Translates to: RCSNLSCSHVSLSPL*NPRIRKFQMLVGHS Trigger: ACTATGCCCAACTAACATTTGGAATTTTCGTATACGTGGATTCCAGAGGGGTGACAGCGAAACGTGACTGCAGGACAAGTTCGAGCATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000570230.1 |
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| CDS CCA 90 bp | CTGTCTGACTTTCCTACAGATTGGAGACTCCCACAACACCCTTATTaGGTTCAGCAATTTGCTACATCACATTACACAACCCATGAAAGC | + |
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Preference number: 5 (lower is better) Translates to: LSDFPTDWRLPQHPY*VQQFATSHYTTHES Trigger: GCTTTCATGGGTTGTGTAATGTGATGTAGCAAATTGCTGAACCCAATAAGGGTGTTGTGGGAGTCTCCAATCTGTAGGAAAGTCAGACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663989.1 |
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| CDS TCA 90 bp | AACTTTGCAGATATAATGAAGTTAAGGGTCTTTGGCTTTTGGGGTTaGTGTACTCACTCGGATCCTTGTAAGAGCAGAGCAGGTGATGGA | + |
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Preference number: 5 (lower is better) Translates to: NFADIMKLRVFGFWG*CTHSDPCKSRAGDG Trigger: TCCATCACCTGCTCTGCTCTTACAAGGATCCGAGTGAGTACATCAACCCCAAAAGCCAAAGACCCTTAACTTCATTATATCTGCAAAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667258.1 |
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| CDS CCA 90 bp | TACTGGTGGGGGAGAGATATGGAAGTGCCAGTTTGTTTCAAGGTTTaGTCCCTGGAACTTATAAGTAATCACACAGTTGGAAAAGTTTGC | + |
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Preference number: 5 (lower is better) Translates to: YWWGRDMEVPVCFKV*SLELISNHTVGKVC Trigger: GCAAACTTTTCCAACTGTGTGATTACTTATAAGTTCCAGGGACCAAACCTTGAAACAAACTGGCACTTCCATATCTCTCCCCCACCAGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000663989.1 |
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| CDS GCA 90 bp | GTTTGGTCCCTGGAACTTATAAGTAATCACACAGTTGGAAAAGTTTaGAGTATAGGAAGTGTCTGGTGGAGAGACAGTAAAGCTTATAAT | + |
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Preference number: 5 (lower is better) Translates to: VWSLELISNHTVGKV*SIGSVWWRDSKAYN Trigger: ATTATAAGCTTTACTGTCTCTCCACCAGACACTTCCTATACTGCAAACTTTTCCAACTGTGTGATTACTTATAAGTTCCAGGGACCAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663989.1 |
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| CDS CCA 90 bp | ATAAGTAATCACACAGTTGGAAAAGTTTGCAGTATAGGAAGTGTCTaGTGGAGAGACAGTAAAGCTTATAATTGCATTCCTAAAGAGCTA | + |
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Preference number: 5 (lower is better) Translates to: ISNHTVGKVCSIGSV*WRDSKAYNCIPKEL Trigger: TAGCTCTTTAGGAATGCAATTATAAGCTTTACTGTCTCTCCACCAGACACTTCCTATACTGCAAACTTTTCCAACTGTGTGATTACTTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663989.1 |
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| CDS CCA 72 bp | TCTGGGCAGAAAGCTGGGCTTTCGGACTTGCCAGAATaGCATGCAGGGGATGAGGTGAGGAGGTGCGGGGTC | + |
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Preference number: 6 (lower is better) Translates to: SGQKAGLSDLPE*HAGDEVRRCGV Trigger: GACCCCGCACCTCCTCACCTCATCCCCTGCATGCCATTCTGGCAAGTCCGAAAGCCCAGCTTTCTGCCCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000663989.1 |
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| CDS TCA 72 bp | TGGGCTTTCGGACTTGCCAGAATGGCATGCAGGGGATaGGGTGAGGAGGTGCGGGGTCTATGGGACATGCTC | + |
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Preference number: 6 (lower is better) Translates to: WAFGLARMACRG*GEEVRGLWDML Trigger: GAGCATGTCCCATAGACCCCGCACCTCCTCACCTCATCCCCTGCATGCCATTCTGGCAAGTCCGAAAGCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000663989.1 |
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| CDS GCA 72 bp | AAGCTTGTTTTCCTGCAACTGGATGGTCCCACCTCCTaGTGTGTGGCTCCTTGCGGCTCCATGGCTCAGGGG | + |
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Preference number: 6 (lower is better) Translates to: KLVFLQLDGPTS*CVAPCGSMAQG Trigger: CCCCTGAGCCATGGAGCCGCAAGGAGCCACACAGCAGGAGGTGGGACCATCCAGTTGCAGGAAAACAAGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000570230.1 |
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| CDS TCA 72 bp | CATGACAAGGTTGCTTCCCTTGGCAGCCAGCCCCACTaGGGCTGTCCAGGTGCCCCCAGCCATCAATCATTT | + |
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Preference number: 6 (lower is better) Translates to: HDKVASLGSQPH*GCPGAPSHQSF Trigger: AAATGATTGATGGCTGGGGGCACCTGGACAGCCTCAGTGGGGCTGGCTGCCAAGGGAAGCAACCTTGTCATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000663989.1 |
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| CDS CAA 90 bp | AGAGACGGGACGGGGGAAGAAATTTCAAATTCTCTCATGACAAGGTaGCTTCCCTTGGCAGCCAGCCCCACTGAGGCTGTCCAGGTGCCC | + |
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Preference number: 6 (lower is better) Translates to: RDGTGEEISNSLMTR*LPLAASPTEAVQVP Trigger: GGGCACCTGGACAGCCTCAGTGGGGCTGGCTGCCAAGGGAAGCAACCTTGTCATGAGAGAATTTGAAATTTCTTCCCCCGTCCCGTCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000663989.1 |
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| CDS TCA 72 bp | TTTCGGACTTGCCAGAATGGCATGCAGGGGATGAGGTaGGGAGGTGCGGGGTCTATGGGACATGCTCTGATG | + |
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Preference number: 6 (lower is better) Translates to: FRTCQNGMQGMR*GGAGSMGHALM Trigger: CATCAGAGCATGTCCCATAGACCCCGCACCTCCTCACCTCATCCCCTGCATGCCATTCTGGCAAGTCCGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000663989.1 |
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| CDS GCA 72 bp | CGGATTCTCCCGCAGAGCCTCGGAAGCTACCGACCCTaGTCCCACCTTGACTCAGTAGGACTTACTGTAGAA | + |
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Preference number: 6 (lower is better) Translates to: RILPQSLGSYRP*SHLDSVGLTVE Trigger: TTCTACAGTAAGTCCTACTGAGTCAAGGTGGGAGCAGGGTCGGTAGCTTCCGAGGCTCTGCGGGAGAATCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000563357.1 ENST00000660047.1 ENST00000660257.1 ENST00000667258.1 |
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| CDS CAA 72 bp | CTTCCACTTTCTGGGCAGAAAGCTGGGCTTTCGGACTaGCCAGAATGGCATGCAGGGGATGAGGTGAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: LPLSGQKAGLSD*PEWHAGDEVRR Trigger: CCTCCTCACCTCATCCCCTGCATGCCATTCTGGCAAGTCCGAAAGCCCAGCTTTCTGCCCAGAAAGTGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663989.1 |
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| CDS CCA 72 bp | GAATCAGTGGGCGTGTTAAGCTTGTTTTCCTGCAACTaGATGGTCCCACCTCCTGCTGTGTGGCTCCTTGCG | + |
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Preference number: 6 (lower is better) Translates to: ESVGVLSLFSCN*MVPPPAVWLLA Trigger: CGCAAGGAGCCACACAGCAGGAGGTGGGACCATCCAGTTGCAGGAAAACAAGCTTAACACGCCCACTGATTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000570230.1 |
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| CDS TCA 72 bp | GAGACGGGACGGGGGAAGAAATTTCAAATTCTCTCATaGCAAGGTTGCTTCCCTTGGCAGCCAGCCCCACTG | + |
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Preference number: 6 (lower is better) Translates to: ETGRGKKFQILS*QGCFPWQPAPL Trigger: CAGTGGGGCTGGCTGCCAAGGGAAGCAACCTTGTCATGAGAGAATTTGAAATTTCTTCCCCCGTCCCGTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000663989.1 |
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| CDS GCA 72 bp | CGGGCAGAGCCAGGTTGTAAACTGACTGTTGTCTGCTaGCAATCTACTGGTGGGGGAGAGATATGGAAGTGC | + |
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Preference number: 6 (lower is better) Translates to: RAEPGCKLTVVC*QSTGGGEIWKC Trigger: GCACTTCCATATCTCTCCCCCACCAGTAGATTGGCAGCAGACAACAGTCAGTTTACAACCTGGCTCTGCCCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000663989.1 |
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| CDS CCA 72 bp | ACAGGCTCTTGCCTTAAGGGAAGCGCTTCCACTTTCTaGGCAGAAAGCTGGGCTTTCGGACTTGCCAGAATG | + |
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Preference number: 6 (lower is better) Translates to: TGSCLKGSASTF*AESWAFGLARM Trigger: CATTCTGGCAAGTCCGAAAGCCCAGCTTTCTGCCCAGAAAGTGGAAGCGCTTCCCTTAAGGCAAGAGCCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663989.1 |
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| CDS CAA 72 bp | GAAATTTCAAATTCTCTCATGACAAGGTTGCTTCCCTaGGCAGCCAGCCCCACTGAGGCTGTCCAGGTGCCC | + |
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Preference number: 6 (lower is better) Translates to: EISNSLMTRLLP*AASPTEAVQVP Trigger: GGGCACCTGGACAGCCTCAGTGGGGCTGGCTGCCAAGGGAAGCAACCTTGTCATGAGAGAATTTGAAATTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663989.1 |
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| CDS CAA 72 bp | CCCTCGCCAGATATGATCCTCCCAGTATCTCTTGTGTaGGGAGAGCAACACAGATGCTCTCCCAACCCTGTC | + |
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Preference number: 6 (lower is better) Translates to: PSPDMILPVSLV*GEQHRCSPNPV Trigger: GACAGGGTTGGGAGAGCATCTGTGTTGCTCTCCCAACACAAGAGATACTGGGAGGATCATATCTGGCGAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663989.1 |
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| CDS TCA 72 bp | GAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTaGAACCCCGTCTCTGAATGCCTTTTTCACAAAGGA | + |
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Preference number: 6 (lower is better) Translates to: EVRRSRPSWLTR*NPVSECLFHKG Trigger: TCCTTTGTGAAAAAGGCATTCAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000563357.1 ENST00000660322.1 |
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| CDS CCA 72 bp | GTTGTCTGCTGCCAATCTACTGGTGGGGGAGAGATATaGAAGTGCCAGTTTGTTTCAAGGTTTGGTCCCTGG | + |
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Preference number: 6 (lower is better) Translates to: VVCCQSTGGGEI*KCQFVSRFGPW Trigger: CCAGGGACCAAACCTTGAAACAAACTGGCACTTCCATATCTCTCCCCCACCAGTAGATTGGCAGCAGACAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000663989.1 |
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| CDS CCA 72 bp | GCGTGTCCTACAGTGCAATCCAATTGTGACAGTAAATaGAGAAAGCATCAGACCCCACAGGCTAAGGGCTCA | + |
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Preference number: 6 (lower is better) Translates to: ACPTVQSNCDSK*RKHQTPQAKGS Trigger: TGAGCCCTTAGCCTGTGGGGTCTGATGCTTTCTCCATTTACTGTCACAATTGGATTGCACTGTAGGACACGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663989.1 |
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| CDS CAA 90 bp | CAACACAGATGCTCTCCCAACCCTGTCCTTTATTACACAGGCAGATaGGTTACGTCTGTGGCCATAGGTGATCAACTCAACCATCAGCAC | + |
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Preference number: 6 (lower is better) Translates to: QHRCSPNPVLYYTGR*VTSVAIGDQLNHQH Trigger: GTGCTGATGGTTGAGTTGATCACCTATGGCCACAGACGTAACCAATCTGCCTGTGTAATAAAGGACAGGGTTGGGAGAGCATCTGTGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663989.1 |
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| CDS GCA 72 bp | TGCTGCCAATCTACTGGTGGGGGAGAGATATGGAAGTaGCAGTTTGTTTCAAGGTTTGGTCCCTGGAACTTA | + |
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Preference number: 6 (lower is better) Translates to: CCQSTGGGEIWK*QFVSRFGPWNL Trigger: TAAGTTCCAGGGACCAAACCTTGAAACAAACTGGCACTTCCATATCTCTCCCCCACCAGTAGATTGGCAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000663989.1 |
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| CDS CAA 72 bp | TGCTCTCCCAACCCTGTCCTTTATTACACAGGCAGATaGGTTACGTCTGTGGCCATAGGTGATCAACTCAAC | + |
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Preference number: 6 (lower is better) Translates to: CSPNPVLYYTGR*VTSVAIGDQLN Trigger: GTTGAGTTGATCACCTATGGCCACAGACGTAACCAATCTGCCTGTGTAATAAAGGACAGGGTTGGGAGAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663989.1 |
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| CDS CCA 72 bp | TTCCCAGGTTACCTTCTGTCTGACTTTCCTACAGATTaGAGACTCCCACAACACCCTTATTGGGTTCAGCAA | + |
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Preference number: 6 (lower is better) Translates to: FPGYLLSDFPTD*RLPQHPYWVQQ Trigger: TTGCTGAACCCAATAAGGGTGTTGTGGGAGTCTCCAATCTGTAGGAAAGTCAGACAGAAGGTAACCTGGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663989.1 |
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| CDS GCA 72 bp | AGACCAAATCTTGGGTACCAGCTGCGTGTCCTACAGTaGAATCCAATTGTGACAGTAAATGGAGAAAGCATC | + |
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Preference number: 6 (lower is better) Translates to: RPNLGYQLRVLQ*NPIVTVNGESI Trigger: GATGCTTTCTCCATTTACTGTCACAATTGGATTGCACTGTAGGACACGCAGCTGGTACCCAAGATTTGGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663989.1 |
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| CDS CCA 72 bp | TTTCCTACAGATTGGAGACTCCCACAACACCCTTATTaGGTTCAGCAATTTGCTACATCACATTACACAACC | + |
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Preference number: 6 (lower is better) Translates to: FPTDWRLPQHPY*VQQFATSHYTT Trigger: GGTTGTGTAATGTGATGTAGCAAATTGCTGAACCCAATAAGGGTGTTGTGGGAGTCTCCAATCTGTAGGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663989.1 |
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| CDS CCA 72 bp | GGGAGAGATATGGAAGTGCCAGTTTGTTTCAAGGTTTaGTCCCTGGAACTTATAAGTAATCACACAGTTGGA | + |
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Preference number: 6 (lower is better) Translates to: GRDMEVPVCFKV*SLELISNHTVG Trigger: TCCAACTGTGTGATTACTTATAAGTTCCAGGGACCAAACCTTGAAACAAACTGGCACTTCCATATCTCTCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663989.1 |
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| CDS CAA 72 bp | CTTTCCTACAGATTGGAGACTCCCACAACACCCTTATaGGGTTCAGCAATTTGCTACATCACATTACACAAC | + |
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Preference number: 6 (lower is better) Translates to: LSYRLETPTTPL*GSAICYITLHN Trigger: GTTGTGTAATGTGATGTAGCAAATTGCTGAACCCAATAAGGGTGTTGTGGGAGTCTCCAATCTGTAGGAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663989.1 |
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| CDS CCA 72 bp | AAGGAACTTTGCAGATATAATGAAGTTAAGGGTCTTTaGCTTTTGGGGTTGATGTACTCACTCGGATCCTTG | + |
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Preference number: 6 (lower is better) Translates to: KELCRYNEVKGL*LLGLMYSLGSL Trigger: CAAGGATCCGAGTGAGTACATCAACCCCAAAAGCCAAAGACCCTTAACTTCATTATATCTGCAAAGTTCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667258.1 |
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| CDS CCA 72 bp | CACACAGTTGGAAAAGTTTGCAGTATAGGAAGTGTCTaGTGGAGAGACAGTAAAGCTTATAATTGCATTCCT | + |
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Preference number: 6 (lower is better) Translates to: HTVGKVCSIGSV*WRDSKAYNCIP Trigger: AGGAATGCAATTATAAGCTTTACTGTCTCTCCACCAGACACTTCCTATACTGCAAACTTTTCCAACTGTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663989.1 |
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| CDS GCA 72 bp | CTGGAACTTATAAGTAATCACACAGTTGGAAAAGTTTaGAGTATAGGAAGTGTCTGGTGGAGAGACAGTAAA | + |
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Preference number: 6 (lower is better) Translates to: LELISNHTVGKV*SIGSVWWRDSK Trigger: TTTACTGTCTCTCCACCAGACACTTCCTATACTGCAAACTTTTCCAACTGTGTGATTACTTATAAGTTCCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663989.1 |
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