Pregenerated sensors for FAM157A (Homo sapiens)
Ensembl gene IDs: ENSG00000236438Ensembl transcript IDs: ENST00000437428.3, ENST00000634862.1
Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GCCAGGAAACGGATTCTCCCGCAGAGCCTCGGAAGCTACCGACCCTaGTCCCACCTTGACTCAGTAGGACTTACTGTAGAATTCTGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: ARKRILPQSLGSYRP*SHLDSVGLTVEFWP Trigger: AGGCCAGAATTCTACAGTAAGTCCTACTGAGTCAAGGTGGGAGCAGGGTCGGTAGCTTCCGAGGCTCTGCGGGAGAATCCGTTTCCTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000634862.1 |
||
| CDS GCA 72 bp | TCCAGTCATTCGAGACGGGCAGCACAAGCTGAGGAGTaGAGGCCACCTCTACGGCCAGGAAACGGATTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSHSRRAAQAEE*RPPLRPGNGFS Trigger: GGAGAATCCGTTTCCTGGCCGTAGAGGTGGCCTGCACTCCTCAGCTTGTGCTGCCCGTCTCGAATGACTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000634862.1 |
||
| CDS TCA 72 bp | GCAGAGCCTCGGAAGCTACCGACCCTGCTCCCACCTTaGCTCAGTAGGACTTACTGTAGAATTCTGGCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: AEPRKLPTLLPP*LSRTYCRILAF Trigger: GAAGGCCAGAATTCTACAGTAAGTCCTACTGAGTCAAGGTGGGAGCAGGGTCGGTAGCTTCCGAGGCTCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000634862.1 |
||
| CDS TCA 72 bp | GAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTaGAACCCCGTCTCTGAATGCCTTTTTCACAAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: EVRRSRPSWLTR*NPVSECLFHKG Trigger: CCCTTTGTGAAAAAGGCATTCAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000437428.3 |
||
| CDS TCA 72 bp | GGACCGAATTATCATGGAGGAACAATGCTGATTTCCTaGTCTAGGGGTTATGTGGTAGTTACCTGGGAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: GPNYHGGTMLIS*SRGYVVVTWES Trigger: ACTCTCCCAGGTAACTACCACATAACCCCTAGATCAGGAAATCAGCATTGTTCCTCCATGATAATTCGGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437428.3 |
||