RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM155A (Homo sapiens)

Ensembl gene IDs: ENSG00000204442

Ensembl transcript IDs: ENST00000375915.4

Found 362 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGAACTCTTGTCAGGCCCCCTTGGCTCCGCTCTGTTTCTGGTTTGTaGAACAGGGGCTCAGAGGCCCACCAAGCGTGCACACCCATTCAC +
Preference number: 1 (lower is better)
Translates to: GTLVRPPWLRSVSGL*NRGSEAHQACTPIH
Trigger: GTGAATGGGTGTGCACGCTTGGTGGGCCTCTGAGCCCCTGTTGCACAAACCAGAAACAGAGCGGAGCCAAGGGGGCCTGACAAGAGTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR TCA 90 bp GAATGGAAACGCCTATGGCACGGGGAGAAGCAGCATGAGGAACGCTaGAGAGATGGTGAGATGGCACATGGAGTGGCCTTACCACAGCAG +
Preference number: 1 (lower is better)
Translates to: EWKRLWHGEKQHEER*RDGEMAHGVALPQQ
Trigger: CTGCTGTGGTAAGGCCACTCCATGTGCCATCTCACCATCTCTTCAGCGTTCCTCATGCTGCTTCTCCCCGTGCCATAGGCGTTTCCATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR CCA 90 bp CAACAGGGGCTCAGAGGCCCACCAAGCGTGCACACCCATTCACTGTaGTTACACAGACAGAAGCAAGCGGATGTTGTTTGCTTAGGGGAC +
Preference number: 1 (lower is better)
Translates to: QQGLRGPPSVHTHSL*LHRQKQADVVCLGD
Trigger: GTCCCCTAAGCAAACAACATCCGCTTGCTTCTGTCTGTGTAACCACAGTGAATGGGTGTGCACGCTTGGTGGGCCTCTGAGCCCCTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR GCA 90 bp ACCCATTCACTGTGGTTACACAGACAGAAGCAAGCGGATGTTGTTTaGTTAGGGGACGAGAAGAGGGCGAGGGAAAGGAAAGGCCGGGAA +
Preference number: 1 (lower is better)
Translates to: THSLWLHRQKQADVV*LGDEKRARERKGRE
Trigger: TTCCCGGCCTTTCCTTTCCCTCGCCCTCTTCTCGTCCCCTAAGCAAACAACATCCGCTTGCTTCTGTCTGTGTAACCACAGTGAATGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR GCA 90 bp GGAGTCGTTGCCTATTTGGATCCTCTGCCTGACCCCAGAAGAAGCTaGTTTGCTTCAACATGTCCAGTGGAAATATTGCGGGAAAGTGGT +
Preference number: 1 (lower is better)
Translates to: GVVAYLDPLPDPRRS*FASTCPVEILRESG
Trigger: ACCACTTTCCCGCAATATTTCCACTGGACATGTTGAAGCAAAGCAGCTTCTTCTGGGGTCAGGCAGAGGATCCAAATAGGCAACGACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR GCA 90 bp TTCTACTTGGCTAGCACGCCAATAACTGGAATCTTGAAGCAGCAGTaGTGCGGTGAGCTGGGAGTTTTAGGGGAAATAGTCACTGAAGAA +
Preference number: 1 (lower is better)
Translates to: FYLASTPITGILKQQ*CGELGVLGEIVTEE
Trigger: TTCTTCAGTGACTATTTCCCCTAAAACTCCCAGCTCACCGCAGCACTGCTGCTTCAAGATTCCAGTTATTGGCGTGCTAGCCAAGTAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR TCA 90 bp CTTCCTAGCCATTCCCTTAGAGGTCATCTGAATAAAATCACCCTGTaGGCTCTTCCTCAGGAATCACTTGCAGCCTCAATTCCTCTGCTT +
Preference number: 1 (lower is better)
Translates to: LPSHSLRGHLNKITL*ALPQESLAASIPLL
Trigger: AAGCAGAGGAATTGAGGCTGCAAGTGATTCCTGAGGAAGAGCTCACAGGGTGATTTTATTCAGATGACCTCTAAGGGAATGGCTAGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR TCA 90 bp ATCTCTTTTAAGCCTCCAATGTTGCCACGAAGTATTCTTCTTGCATaGGGTGTCACGTACAAATACATCATTGACCTCCCTGTGTCACCT +
Preference number: 1 (lower is better)
Translates to: ISFKPPMLPRSILLA*GVTYKYIIDLPVSP
Trigger: AGGTGACACAGGGAGGTCAATGATGTATTTGTACGTGACACCTCATGCAAGAAGAATACTTCGTGGCAACATTGGAGGCTTAAAAGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR CAA 90 bp AAAGGAACTCTTGTCAGGCCCCCTTGGCTCCGCTCTGTTTCTGGTTaGTGCAACAGGGGCTCAGAGGCCCACCAAGCGTGCACACCCATT +
Preference number: 2 (lower is better)
Translates to: KGTLVRPPWLRSVSG*CNRGSEAHQACTPI
Trigger: AATGGGTGTGCACGCTTGGTGGGCCTCTGAGCCCCTGTTGCACAAACCAGAAACAGAGCGGAGCCAAGGGGGCCTGACAAGAGTTCCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR CAA 90 bp CACCCATTCACTGTGGTTACACAGACAGAAGCAAGCGGATGTTGTTaGCTTAGGGGACGAGAAGAGGGCGAGGGAAAGGAAAGGCCGGGA +
Preference number: 2 (lower is better)
Translates to: HPFTVVTQTEASGCC*LRGREEGEGKERPG
Trigger: TCCCGGCCTTTCCTTTCCCTCGCCCTCTTCTCGTCCCCTAAGCAAACAACATCCGCTTGCTTCTGTCTGTGTAACCACAGTGAATGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR-3UTR GCA 90 bp TGTTGTTCAGATATCAAATACCATATGCCAATTCAGGTATTTGGCACATGGGTCCGGCGGGCCAGCTGCTaGTGTGGTGACACTCGTCCT +
Preference number: 2 (lower is better)
Translates to: CCSDIKYHMPIQVFGTWVRRASC*CGDTRP
Trigger: AGGACGAGTGTCACCACAGCAGCAGCTGGCCCGCCG...GACCCATGTGCCAAATACCTGAATTGGCATATGGTATTTGATATCTGAACAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR-3UTR GCA 90 bp GTGTGCCAGGAAAACTACTACAAAGAATCAACGGATGTAGTGAAATCTGCATCATCACGGCGGGCCAGCTaGTGCTGTGGTGACACTCGT +
Preference number: 2 (lower is better)
Translates to: VCQENYYKESTDVVKSASSRRAS*CCGDTR
Trigger: ACGAGTGTCACCACAGCAGCAGCTGGCCCGCCGTGA...TGATGCAGATTTCACTACATCCGTTGATTCTTTGTAGTAGTTTTCCTGGCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR CAA 90 bp CACCTATTATGGAGAGCACTTGTTTGTTCAGCTAAAAAGGAACTCTaGTCAGGCCCCCTTGGCTCCGCTCTGTTTCTGGTTTGTGCAACA +
Preference number: 2 (lower is better)
Translates to: HLLWRALVCSAKKEL*SGPLGSALFLVCAT
Trigger: TGTTGCACAAACCAGAAACAGAGCGGAGCCAAGGGGGCCTGACAAGAGTTCCTTTTTAGCTGAACAAACAAGTGCTCTCCATAATAGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR CAA 90 bp CACGAAGTATTCTTCTTGCATGAGGTGTCACGTACAAATACATCATaGACCTCCCTGTGTCACCTGGAGCCAAAGCTCATCCCTAAACCA +
Preference number: 2 (lower is better)
Translates to: HEVFFLHEVSRTNTS*TSLCHLEPKLIPKP
Trigger: TGGTTTAGGGATGAGCTTTGGCTCCAGGTGACACAGGGAGGTCAATGATGTATTTGTACGTGACACCTCATGCAAGAAGAATACTTCGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR-3UTR CCA 90 bp TGTTGTTCAGATATCAAATACCATATGCCAATTCAGGTATTTGGCACATGGGTCGCTCCGCTCTGTTTCTaGTTTGTGCAACAGGGGCTC +
Preference number: 2 (lower is better)
Translates to: CCSDIKYHMPIQVFGTWVAPLCF*FVQQGL
Trigger: GAGCCCCTGTTGCACAAACCAGAAACAGAGCGGAGC...GACCCATGTGCCAAATACCTGAATTGGCATATGGTATTTGATATCTGAACAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR-3UTR CCA 90 bp GTGTGCCAGGAAAACTACTACAAAGAATCAACGGATGTAGTGAAATCTGCATCAGAATGGAAACGCCTATaGCACGGGGAGAAGCAGCAT +
Preference number: 2 (lower is better)
Translates to: VCQENYYKESTDVVKSASEWKRL*HGEKQH
Trigger: ATGCTGCTTCTCCCCGTGCCATAGGCGTTTCCATTC...TGATGCAGATTTCACTACATCCGTTGATTCTTTGTAGTAGTTTTCCTGGCACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR-3UTR TCA 90 bp AATAAAAGTGAGTGGAATTTGCACTTGCATTGTCATTTTCCTGCAAGAATGGAACGGGGAGAAGCAGCATaGGGAACGCTGAAGAGATGG +
Preference number: 2 (lower is better)
Translates to: NKSEWNLHLHCHFPARMERGEAA*GTLKRW
Trigger: CCATCTCTTCAGCGTTCCTCATGCTGCTTCTCCCCG...TTCCATTCTTGCAGGAAAATGACAATGCAAGTGCAAATTCCACTCACTTTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR-3UTR GCA 90 bp AATAAAAGTGAGTGGAATTTGCACTTGCATTGTCATTTTCCTGCAAGAATGGAAGAGGCCCACCAAGCGTaGACACCCATTCACTGTGGT +
Preference number: 2 (lower is better)
Translates to: NKSEWNLHLHCHFPARMEEAHQA*TPIHCG
Trigger: ACCACAGTGAATGGGTGTGCACGCTTGGTGGGCCTC...TTCCATTCTTGCAGGAAAATGACAATGCAAGTGCAAATTCCACTCACTTTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR-3UTR GCA 90 bp ATTCACTTCCTCAGCTTGTGTCCCCAGAAAAGCACCATGTTTCCATACACTAAACTGATTCTAGATAGCTaGTCCTGTCCAACTGGACCA +
Preference number: 2 (lower is better)
Translates to: IHFLSLCPQKSTMFPYTKLILDS*SCPTGP
Trigger: TGGTCCAGTTGGACAGGAGCAGCTATCTAGAATCAG...TTTAGTGTATGGAAACATGGTGCTTTTCTGGGGACACAAGCTGAGGAAGTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR-3UTR CCA 90 bp TGTTGTTCAGATATCAAATACCATATGCCAATTCAGGTATTTGGCACATGGGTCGAGTCGTTGCCTATTTaGATCCTCTGCCTGACCCCA +
Preference number: 2 (lower is better)
Translates to: CCSDIKYHMPIQVFGTWVESLPI*ILCLTP
Trigger: TGGGGTCAGGCAGAGGATCCAAATAGGCAACGACTC...GACCCATGTGCCAAATACCTGAATTGGCATATGGTATTTGATATCTGAACAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR-3UTR TCA 90 bp ATTCACTTCCTCAGCTTGTGTCCCCAGAAAAGCACCATGTTTCCATACACTAAACACTGCAAACTTATCTaGAGTGCACTTCCCAAGTGT +
Preference number: 2 (lower is better)
Translates to: IHFLSLCPQKSTMFPYTKHCKLI*SALPKC
Trigger: ACACTTGGGAAGTGCACTTCAGATAAGTTTGCAGTG...TTTAGTGTATGGAAACATGGTGCTTTTCTGGGGACACAAGCTGAGGAAGTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR-3UTR TCA 90 bp AATAAAAGTGAGTGGAATTTGCACTTGCATTGTCATTTTCCTGCAAGAATGGAAACGCTGAAGAGATGGTaGGATGGCACATGGAGTGGC +
Preference number: 2 (lower is better)
Translates to: NKSEWNLHLHCHFPARMETLKRW*DGTWSG
Trigger: GCCACTCCATGTGCCATCTCACCATCTCTTCAGCGT...TTCCATTCTTGCAGGAAAATGACAATGCAAGTGCAAATTCCACTCACTTTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR-3UTR TCA 90 bp ATTCACTTCCTCAGCTTGTGTCCCCAGAAAAGCACCATGTTTCCATACACTAAACCAGTTTCTGTTACATaGGACAGCAGTTGCCATTTT +
Preference number: 2 (lower is better)
Translates to: IHFLSLCPQKSTMFPYTKPVSVT*DSSCHF
Trigger: AAAATGGCAACTGCTGTCTCATGTAACAGAAACTGG...TTTAGTGTATGGAAACATGGTGCTTTTCTGGGGACACAAGCTGAGGAAGTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR-3UTR GCA 90 bp AATAAAAGTGAGTGGAATTTGCACTTGCATTGTCATTTTCCTGCAAGAATGGAATCTGTTTCTGGTTTGTaGAACAGGGGCTCAGAGGCC +
Preference number: 2 (lower is better)
Translates to: NKSEWNLHLHCHFPARMESVSGL*NRGSEA
Trigger: GGCCTCTGAGCCCCTGTTGCACAAACCAGAAACAGA...TTCCATTCTTGCAGGAAAATGACAATGCAAGTGCAAATTCCACTCACTTTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR-3UTR CCA 90 bp AAATGTGTTAACTGTCTGATTCCACCTATTATGGAGAGCACTTGTTTGTTCAGCGTGTTGTTGGTTCTGTaGGTAGAAGGGAGACTTAGG +
Preference number: 2 (lower is better)
Translates to: KCVNCLIPPIMESTCLFSVLLVL*VEGRLR
Trigger: CCTAAGTCTCCCTTCTACCCACAGAACCAACAACAC...GCTGAACAAACAAGTGCTCTCCATAATAGGTGGAATCAGACAGTTAACACATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR CAA 90 bp TACTTATCTCTTTTAAGCCTCCAATGTTGCCACGAAGTATTCTTCTaGCATGAGGTGTCACGTACAAATACATCATTGACCTCCCTGTGT +
Preference number: 2 (lower is better)
Translates to: YLSLLSLQCCHEVFF*HEVSRTNTSLTSLC
Trigger: ACACAGGGAGGTCAATGATGTATTTGTACGTGACACCTCATGCAAGAAGAATACTTCGTGGCAACATTGGAGGCTTAAAAGAGATAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR-3UTR GCA 90 bp AATAAAAGTGAGTGGAATTTGCACTTGCATTGTCATTTTCCTGCAAGAATGGAACAAGCGGATGTTGTTTaGTTAGGGGACGAGAAGAGG +
Preference number: 2 (lower is better)
Translates to: NKSEWNLHLHCHFPARMEQADVV*LGDEKR
Trigger: CCTCTTCTCGTCCCCTAAGCAAACAACATCCGCTTG...TTCCATTCTTGCAGGAAAATGACAATGCAAGTGCAAATTCCACTCACTTTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR CAA 90 bp ACATGTGCTGTTATGGACTACATAATGTTTTGGTTGAAGTTTTATTaGCAAGCGATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: TCAVMDYIMFWLKFY*QAMCVCVCVCVCVC
Trigger: ACACACACACACACACACACACACACACACACACATCGCTTGCAAATAAAACTTCAACCAAAACATTATGTAGTCCATAACAGCACATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR-3UTR TCA 90 bp AAATGTGTTAACTGTCTGATTCCACCTATTATGGAGAGCACTTGTTTGTTCAGCGACTTAGTTTACCTCTaGGAAACCATCCCCCAAAAT +
Preference number: 2 (lower is better)
Translates to: KCVNCLIPPIMESTCLFSDLVYL*ETIPQN
Trigger: ATTTTGGGGGATGGTTTCTCAGAGGTAAACTAAGTC...GCTGAACAAACAAGTGCTCTCCATAATAGGTGGAATCAGACAGTTAACACATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR-3UTR TCA 90 bp GTGTGCCAGGAAAACTACTACAAAGAATCAACGGATGTAGTGAAATCTGCATCAGTATCTGTCCACATGTaGATGTATTTGCATTTGCAG +
Preference number: 2 (lower is better)
Translates to: VCQENYYKESTDVVKSASVSVHM*MYLHLQ
Trigger: CTGCAAATGCAAATACATTCACATGTGGACAGATAC...TGATGCAGATTTCACTACATCCGTTGATTCTTTGTAGTAGTTTTCCTGGCACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR-3UTR TCA 90 bp GTAATTTGTAATCAGAAGATGCTTGAGTTCCATCATTTGCATTACCTACCTGTGCCCTTAGAGGTCATCTaGATAAAATCACCCTGTGAG +
Preference number: 2 (lower is better)
Translates to: VICNQKMLEFHHLHYLPVPLEVI*IKSPCE
Trigger: CTCACAGGGTGATTTTATTCAGATGACCTCTAAGGG...CACAGGTAGGTAATGCAAATGATGGAACTCAAGCATCTTCTGATTACAAATTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR-3UTR TCA 90 bp GTAATTTGTAATCAGAAGATGCTTGAGTTCCATCATTTGCATTACCTACCTGTGATCAGTGATTGTTTCTaGGCTTGGGAAAGGAGTCGT +
Preference number: 2 (lower is better)
Translates to: VICNQKMLEFHHLHYLPVISDCF*AWERSR
Trigger: ACGACTCCTTTCCCAAGCTCAGAAACAATCACTGAT...CACAGGTAGGTAATGCAAATGATGGAACTCAAGCATCTTCTGATTACAAATTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR-3UTR GCA 90 bp AATAAAAGTGAGTGGAATTTGCACTTGCATTGTCATTTTCCTGCAAGAATGGAATCCTCAGGAATCACTTaGAGCCTCAATTCCTCTGCT +
Preference number: 2 (lower is better)
Translates to: NKSEWNLHLHCHFPARMESSGIT*SLNSSA
Trigger: AGCAGAGGAATTGAGGCTGCAAGTGATTCCTGAGGA...TTCCATTCTTGCAGGAAAATGACAATGCAAGTGCAAATTCCACTCACTTTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR-3UTR GCA 90 bp GTAATTTGTAATCAGAAGATGCTTGAGTTCCATCATTTGCATTACCTACCTGTGGTCCAGTGGAAATATTaGGGGAAAGTGGTTACACAC +
Preference number: 2 (lower is better)
Translates to: VICNQKMLEFHHLHYLPVVQWKY*GKVVTH
Trigger: GTGTGTAACCACTTTCCCGCAATATTTCCACTGGAC...CACAGGTAGGTAATGCAAATGATGGAACTCAAGCATCTTCTGATTACAAATTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR-3UTR GCA 90 bp TTTAAGATCCAAGGCATTTCTTTAGCTACTAATATACTCCGGAATGTTCCTTTCGACCCCAGAAGAAGCTaGTTTGCTTCAACATGTCCA +
Preference number: 2 (lower is better)
Translates to: FKIQGISLATNILRNVPFDPRRS*FASTCP
Trigger: TGGACATGTTGAAGCAAAGCAGCTTCTTCTGGGGTC...GAAAGGAACATTCCGGAGTATATTAGTAGCTAAAGAAATGCCTTGGATCTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR-3UTR CCA 90 bp GTAATTTGTAATCAGAAGATGCTTGAGTTCCATCATTTGCATTACCTACCTGTGCACACCCATTCACTGTaGTTACACAGACAGAAGCAA +
Preference number: 2 (lower is better)
Translates to: VICNQKMLEFHHLHYLPVHTHSL*LHRQKQ
Trigger: TTGCTTCTGTCTGTGTAACCACAGTGAATGGGTGTG...CACAGGTAGGTAATGCAAATGATGGAACTCAAGCATCTTCTGATTACAAATTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR CAA 90 bp TACGCATGTCGCAGGGTTAAGTATGATGCAGAGGTTAAAGTCTGTTaGAACAAAAACAAATGCCCGGGGAAATTTCATAGCTATAAAGTT +
Preference number: 2 (lower is better)
Translates to: YACRRVKYDAEVKVC*NKNKCPGKFHSYKV
Trigger: AACTTTATAGCTATGAAATTTCCCCGGGCATTTGTTTTTGTTCAAACAGACTTTAACCTCTGCATCATACTTAACCCTGCGACATGCGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR-3UTR TCA 90 bp CCAATAAAAGTGAGTGGAATTTGCACTTGCATTGTCATTTTCCTGCAAGAATGGGAACAAAAATCACAATaGAAGCCCACCTTCATTGTC +
Preference number: 2 (lower is better)
Translates to: PIKVSGICTCIVIFLQEWEQKSQ*KPTFIV
Trigger: GACAATGAAGGTGGGCTTTCATTGTGATTTTTGTTC...CCATTCTTGCAGGAAAATGACAATGCAAGTGCAAATTCCACTCACTTTTATTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR-3UTR TCA 90 bp GTGTGCCAGGAAAACTACTACAAAGAATCAACGGATGTAGTGAAATCTGCATCATATATTGCAGGTGTTTaGGCATTTCTAGTGTCTCTT +
Preference number: 2 (lower is better)
Translates to: VCQENYYKESTDVVKSASYIAGV*AFLVSL
Trigger: AAGAGACACTAGAAATGCTCAAACACCTGCAATATA...TGATGCAGATTTCACTACATCCGTTGATTCTTTGTAGTAGTTTTCCTGGCACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR-3UTR CCA 90 bp AATAAAAGTGAGTGGAATTTGCACTTGCATTGTCATTTTCCTGCAAGAATGGAACTTGGGGATGGGAACTaGAGCAATACAGTTCATGAT +
Preference number: 2 (lower is better)
Translates to: NKSEWNLHLHCHFPARMELGDGN*SNTVHD
Trigger: ATCATGAACTGTATTGCTCCAGTTCCCATCCCCAAG...TTCCATTCTTGCAGGAAAATGACAATGCAAGTGCAAATTCCACTCACTTTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR CAA 90 bp AGAATAATTTATTGTCATACCAATAAAAGTGAGTGGAATTTGCACTaGCATTGTCATTTTCCTGCAAGAATGGAAACGCCTATGGCACGG +
Preference number: 2 (lower is better)
Translates to: RIIYCHTNKSEWNLH*HCHFPARMETPMAR
Trigger: CCGTGCCATAGGCGTTTCCATTCTTGCAGGAAAATGACAATGCAAGTGCAAATTCCACTCACTTTTATTGGTATGACAATAAATTATTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR-3UTR TCA 90 bp AATAAAAGTGAGTGGAATTTGCACTTGCATTGTCATTTTCCTGCAAGAATGGAATGTACACTCAGCAGGTaGAATGTTCCCACAAAGAAA +
Preference number: 2 (lower is better)
Translates to: NKSEWNLHLHCHFPARMECTLSR*NVPTKK
Trigger: TTTCTTTGTGGGAACATTTCACCTGCTGAGTGTACA...TTCCATTCTTGCAGGAAAATGACAATGCAAGTGCAAATTCCACTCACTTTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR-3UTR TCA 90 bp TGTTGTTCAGATATCAAATACCATATGCCAATTCAGGTATTTGGCACATGGGTCAACTCTTCCTTCCACTaGTTCTACTGTAAACTCATA +
Preference number: 2 (lower is better)
Translates to: CCSDIKYHMPIQVFGTWVNSSFH*FYCKLI
Trigger: TATGAGTTTACAGTAGAATCAGTGGAAGGAAGAGTT...GACCCATGTGCCAAATACCTGAATTGGCATATGGTATTTGATATCTGAACAACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR-3UTR TCA 90 bp TTTAAGATCCAAGGCATTTCTTTAGCTACTAATATACTCCGGAATGTTCCTTTCAATAAAATCACCCTGTaGGCTCTTCCTCAGGAATCA +
Preference number: 2 (lower is better)
Translates to: FKIQGISLATNILRNVPFNKITL*ALPQES
Trigger: TGATTCCTGAGGAAGAGCTCACAGGGTGATTTTATT...GAAAGGAACATTCCGGAGTATATTAGTAGCTAAAGAAATGCCTTGGATCTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR-3UTR GCA 90 bp GTAATTTGTAATCAGAAGATGCTTGAGTTCCATCATTTGCATTACCTACCTGTGGCATTGTCATTTTCCTaGAAGAATGGAAACGCCTAT +
Preference number: 2 (lower is better)
Translates to: VICNQKMLEFHHLHYLPVALSFS*KNGNAY
Trigger: ATAGGCGTTTCCATTCTTGCAGGAAAATGACAATGC...CACAGGTAGGTAATGCAAATGATGGAACTCAAGCATCTTCTGATTACAAATTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR-3UTR GCA 90 bp GTGTGCCAGGAAAACTACTACAAAGAATCAACGGATGTAGTGAAATCTGCATCAAAAGTGAGTGGAATTTaGACTTGCATTGTCATTTTC +
Preference number: 2 (lower is better)
Translates to: VCQENYYKESTDVVKSASKVSGI*TCIVIF
Trigger: GAAAATGACAATGCAAGTGCAAATTCCACTCACTTT...TGATGCAGATTTCACTACATCCGTTGATTCTTTGTAGTAGTTTTCCTGGCACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR-3UTR GCA 90 bp GTGTGCCAGGAAAACTACTACAAAGAATCAACGGATGTAGTGAAATCTGCATCAATTTACAATGAAGACTaGAGTGTTTCTCCCAACTTT +
Preference number: 2 (lower is better)
Translates to: VCQENYYKESTDVVKSASIYNED*SVSPNF
Trigger: AAAGTTGGGAGAAACACTGCAGTCTTCATTGTAAAT...TGATGCAGATTTCACTACATCCGTTGATTCTTTGTAGTAGTTTTCCTGGCACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR-3UTR TCA 90 bp TTTAAGATCCAAGGCATTTCTTTAGCTACTAATATACTCCGGAATGTTCCTTTCTCCTCTAATAGAAGCTaGCAGGACATAAAGACAGAA +
Preference number: 2 (lower is better)
Translates to: FKIQGISLATNILRNVPFSSNRS*QDIKTE
Trigger: TTCTGTCTTTATGTCCTGTCAGCTTCTATTAGAGGA...GAAAGGAACATTCCGGAGTATATTAGTAGCTAAAGAAATGCCTTGGATCTTAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR-3UTR GCA 90 bp TGTTGTTCAGATATCAAATACCATATGCCAATTCAGGTATTTGGCACATGGGTCGTGCTCCTATATTACTaGAACAGAACAAAAATCACA +
Preference number: 2 (lower is better)
Translates to: CCSDIKYHMPIQVFGTWVVLLYY*NRTKIT
Trigger: TGTGATTTTTGTTCTGTTGCAGTAATATAGGAGCAC...GACCCATGTGCCAAATACCTGAATTGGCATATGGTATTTGATATCTGAACAACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR-3UTR CCA 90 bp GTAATTTGTAATCAGAAGATGCTTGAGTTCCATCATTTGCATTACCTACCTGTGGTCAATAAAAAGCTGTaGTTGTGTCCTTGTTTGGAT +
Preference number: 2 (lower is better)
Translates to: VICNQKMLEFHHLHYLPVVNKKL*LCPCLD
Trigger: ATCCAAACAAGGACACAACCACAGCTTTTTATTGAC...CACAGGTAGGTAATGCAAATGATGGAACTCAAGCATCTTCTGATTACAAATTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR CAA 90 bp TTCATCATTATGGTATACATGTGCTGTTATGGACTACATAATGTTTaGGTTGAAGTTTTATTTGCAAGCGATGTGTGTGTGTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: FIIMVYMCCYGLHNV*VEVLFASDVCVCVC
Trigger: ACACACACACACACACACATCGCTTGCAAATAAAACTTCAACCAAAACATTATGTAGTCCATAACAGCACATGTATACCATAATGATGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR-3UTR TCA 90 bp AATAAAAGTGAGTGGAATTTGCACTTGCATTGTCATTTTCCTGCAAGAATGGAAAATGTGTTAACTGTCTaGTTCCACCTATTATGGAGA +
Preference number: 2 (lower is better)
Translates to: NKSEWNLHLHCHFPARMENVLTV*FHLLWR
Trigger: TCTCCATAATAGGTGGAATCAGACAGTTAACACATT...TTCCATTCTTGCAGGAAAATGACAATGCAAGTGCAAATTCCACTCACTTTTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR-3UTR TCA 90 bp TTTAAGATCCAAGGCATTTCTTTAGCTACTAATATACTCCGGAATGTTCCTTTCTTCTACTACCACTGTTaGTCAATTTACACTTGCTTG +
Preference number: 2 (lower is better)
Translates to: FKIQGISLATNILRNVPFFYYHC*SIYTCL
Trigger: CAAGCAAGTGTAAATTGATCAACAGTGGTAGTAGAA...GAAAGGAACATTCCGGAGTATATTAGTAGCTAAAGAAATGCCTTGGATCTTAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR-3UTR GCA 90 bp TTTAAGATCCAAGGCATTTCTTTAGCTACTAATATACTCCGGAATGTTCCTTTCGTGATAATGCAGAATTaGATACACTGTATACCTGGA +
Preference number: 2 (lower is better)
Translates to: FKIQGISLATNILRNVPFVIMQN*IHCIPG
Trigger: TCCAGGTATACAGTGTATGCAATTCTGCATTATCAC...GAAAGGAACATTCCGGAGTATATTAGTAGCTAAAGAAATGCCTTGGATCTTAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR-3UTR GCA 90 bp AATAAAAGTGAGTGGAATTTGCACTTGCATTGTCATTTTCCTGCAAGAATGGAATTGAACAAAAACAAATaGCCGGGGAAATTTCATAGC +
Preference number: 2 (lower is better)
Translates to: NKSEWNLHLHCHFPARMELNKNK*PGKFHS
Trigger: GCTATGAAATTTCCCCGGGCATTTGTTTTTGTTCAA...TTCCATTCTTGCAGGAAAATGACAATGCAAGTGCAAATTCCACTCACTTTTATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR-3UTR GCA 90 bp TTTAAGATCCAAGGCATTTCTTTAGCTACTAATATACTCCGGAATGTTCCTTTCGTTGGGATACCAAAGTaGTCATTTCTACAAGTGTTT +
Preference number: 2 (lower is better)
Translates to: FKIQGISLATNILRNVPFVGIPK*SFLQVF
Trigger: AAACACTTGTAGAAATGAGCACTTTGGTATCCCAAC...GAAAGGAACATTCCGGAGTATATTAGTAGCTAAAGAAATGCCTTGGATCTTAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR-3UTR CCA 90 bp TTTAAGATCCAAGGCATTTCTTTAGCTACTAATATACTCCGGAATGTTCCTTTCTCAGTAGTAGCCTTTTaGGAGTGGAAATCGAAAATA +
Preference number: 2 (lower is better)
Translates to: FKIQGISLATNILRNVPFSVVAF*EWKSKI
Trigger: TATTTTCGATTTCCACTCCCAAAAGGCTACTACTGA...GAAAGGAACATTCCGGAGTATATTAGTAGCTAAAGAAATGCCTTGGATCTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR-3UTR GCA 90 bp AATAAAAGTGAGTGGAATTTGCACTTGCATTGTCATTTTCCTGCAAGAATGGAATTTCAAAACAAAATATaGATACTGTACGCATGTCGC +
Preference number: 2 (lower is better)
Translates to: NKSEWNLHLHCHFPARMEFQNKI*ILYACR
Trigger: GCGACATGCGTACAGTATGCATATTTTGTTTTGAAA...TTCCATTCTTGCAGGAAAATGACAATGCAAGTGCAAATTCCACTCACTTTTATT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR-3UTR CCA 90 bp TTTAAGATCCAAGGCATTTCTTTAGCTACTAATATACTCCGGAATGTTCCTTTCAATATTGCGGGAAAGTaGTTACACACTTACACTAAT +
Preference number: 2 (lower is better)
Translates to: FKIQGISLATNILRNVPFNIAGK*LHTYTN
Trigger: ATTAGTGTAAGTGTGTAACCACTTTCCCGCAATATT...GAAAGGAACATTCCGGAGTATATTAGTAGCTAAAGAAATGCCTTGGATCTTAAA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR-3UTR CCA 90 bp TTTAAGATCCAAGGCATTTCTTTAGCTACTAATATACTCCGGAATGTTCCTTTCAATCATGCTTCAGACTaGTTAACGTTTTTGATGTTG +
Preference number: 2 (lower is better)
Translates to: FKIQGISLATNILRNVPFNHASD*LTFLML
Trigger: CAACATCAAAAACGTTAACCAGTCTGAAGCATGATT...GAAAGGAACATTCCGGAGTATATTAGTAGCTAAAGAAATGCCTTGGATCTTAAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR GCA 72 bp GTCAGGCCCCCTTGGCTCCGCTCTGTTTCTGGTTTGTaGAACAGGGGCTCAGAGGCCCACCAAGCGTGCACA +
Preference number: 3 (lower is better)
Translates to: VRPPWLRSVSGL*NRGSEAHQACT
Trigger: TGTGCACGCTTGGTGGGCCTCTGAGCCCCTGTTGCACAAACCAGAAACAGAGCGGAGCCAAGGGGGCCTGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR CCA 72 bp AACTCTTGTCAGGCCCCCTTGGCTCCGCTCTGTTTCTaGTTTGTGCAACAGGGGCTCAGAGGCCCACCAAGC +
Preference number: 3 (lower is better)
Translates to: NSCQAPLAPLCF*FVQQGLRGPPS
Trigger: GCTTGGTGGGCCTCTGAGCCCCTGTTGCACAAACCAGAAACAGAGCGGAGCCAAGGGGGCCTGACAAGAGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR-3UTR CAA 90 bp GCCCACCAAGCGTGCACACCCATTCACTGTGGTTACACAGACAGAAGCAAGCGGAGGCCGGGAAGGGTGTaGTTGGTTCTGTGGGTAGAA +
Preference number: 3 (lower is better)
Translates to: AHQACTPIHCGYTDRSKRRPGRV*LVLWVE
Trigger: TTCTACCCACAGAACCAACAACACCCTTCCCGGCCT...CCGCTTGCTTCTGTCTGTGTAACCACAGTGAATGGGTGTGCACGCTTGGTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR TCA 72 bp CGCCTATGGCACGGGGAGAAGCAGCATGAGGAACGCTaGAGAGATGGTGAGATGGCACATGGAGTGGCCTTA +
Preference number: 3 (lower is better)
Translates to: RLWHGEKQHEER*RDGEMAHGVAL
Trigger: TAAGGCCACTCCATGTGCCATCTCACCATCTCTTCAGCGTTCCTCATGCTGCTTCTCCCCGTGCCATAGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR CCA 72 bp AGAAGCAGCATGAGGAACGCTGAAGAGATGGTGAGATaGCACATGGAGTGGCCTTACCACAGCAGAGGTAGA +
Preference number: 3 (lower is better)
Translates to: RSSMRNAEEMVR*HMEWPYHSRGR
Trigger: TCTACCTCTGCTGTGGTAAGGCCACTCCATGTGCCATCTCACCATCTCTTCAGCGTTCCTCATGCTGCTTCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR GCA 72 bp CTGTGGTTACACAGACAGAAGCAAGCGGATGTTGTTTaGTTAGGGGACGAGAAGAGGGCGAGGGAAAGGAAA +
Preference number: 3 (lower is better)
Translates to: LWLHRQKQADVV*LGDEKRARERK
Trigger: TTTCCTTTCCCTCGCCCTCTTCTCGTCCCCTAAGCAAACAACATCCGCTTGCTTCTGTCTGTGTAACCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR GCA 72 bp GCTAGCACGCCAATAACTGGAATCTTGAAGCAGCAGTaGTGCGGTGAGCTGGGAGTTTTAGGGGAAATAGTC +
Preference number: 3 (lower is better)
Translates to: ASTPITGILKQQ*CGELGVLGEIV
Trigger: GACTATTTCCCCTAAAACTCCCAGCTCACCGCAGCACTGCTGCTTCAAGATTCCAGTTATTGGCGTGCTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR-3UTR CAA 90 bp GCAAGCGGATGTTGTTTGCTTAGGGGACGAGAAGAGGGCGAGGGAAAGGAAAGGAATAAAAAGCTGTGGTaGTGTCCTTGTTTGGATTCA +
Preference number: 3 (lower is better)
Translates to: ASGCCLLRGREEGEGKERNKKLW*CPCLDS
Trigger: TGAATCCAAACAAGGACACAACCACAGCTTTTTATT...CCTTTCCTTTCCCTCGCCCTCTTCTCGTCCCCTAAGCAAACAACATCCGCTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR-3UTR CAA 90 bp TGTTGTTCAGATATCAAATACCATATGCCAATTCAGGTATTTGGCACATGGGTCTCTTGTCAGGCCCCCTaGGCTCCGCTCTGTTTCTGG +
Preference number: 3 (lower is better)
Translates to: CCSDIKYHMPIQVFGTWVSCQAP*APLCFW
Trigger: CCAGAAACAGAGCGGAGCCAAGGGGGCCTGACAAGA...GACCCATGTGCCAAATACCTGAATTGGCATATGGTATTTGATATCTGAACAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR-3UTR CAA 90 bp GTAATTTGTAATCAGAAGATGCTTGAGTTCCATCATTTGCATTACCTACCTGTGAAAGGGCTGGGCCACTaGGGGATGGGAACTGGAGCA +
Preference number: 3 (lower is better)
Translates to: VICNQKMLEFHHLHYLPVKGLGH*GMGTGA
Trigger: TGCTCCAGTTCCCATCCCCAAGTGGCCCAGCCCTTT...CACAGGTAGGTAATGCAAATGATGGAACTCAAGCATCTTCTGATTACAAATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR-3UTR CAA 90 bp GTGTGCCAGGAAAACTACTACAAAGAATCAACGGATGTAGTGAAATCTGCATCATACATGAGACAGCAGTaGCCATTTTTCACGGCGGGC +
Preference number: 3 (lower is better)
Translates to: VCQENYYKESTDVVKSASYMRQQ*PFFTAG
Trigger: GCCCGCCGTGAAAAATGGCAACTGCTGTCTCATGTA...TGATGCAGATTTCACTACATCCGTTGATTCTTTGTAGTAGTTTTCCTGGCACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR-3UTR CAA 90 bp GTAATTTGTAATCAGAAGATGCTTGAGTTCCATCATTTGCATTACCTACCTGTGCCGGGAAGGGTGTTGTaGGTTCTGTGGGTAGAAGGG +
Preference number: 3 (lower is better)
Translates to: VICNQKMLEFHHLHYLPVPGRVL*VLWVEG
Trigger: CCCTTCTACCCACAGAACCAACAACACCCTTCCCGG...CACAGGTAGGTAATGCAAATGATGGAACTCAAGCATCTTCTGATTACAAATTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR TCA 72 bp ACAGACTCCTTCCTAGCCATTCCCTTAGAGGTCATCTaGATAAAATCACCCTGTGAGCTCTTCCTCAGGAAT +
Preference number: 3 (lower is better)
Translates to: TDSFLAIPLEVI*IKSPCELFLRN
Trigger: ATTCCTGAGGAAGAGCTCACAGGGTGATTTTATTCAGATGACCTCTAAGGGAATGGCTAGGAAGGAGTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR TCA 72 bp CATTCCCTTAGAGGTCATCTGAATAAAATCACCCTGTaGGCTCTTCCTCAGGAATCACTTGCAGCCTCAATT +
Preference number: 3 (lower is better)
Translates to: HSLRGHLNKITL*ALPQESLAASI
Trigger: AATTGAGGCTGCAAGTGATTCCTGAGGAAGAGCTCACAGGGTGATTTTATTCAGATGACCTCTAAGGGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR TCA 72 bp AAGCCTCCAATGTTGCCACGAAGTATTCTTCTTGCATaGGGTGTCACGTACAAATACATCATTGACCTCCCT +
Preference number: 3 (lower is better)
Translates to: KPPMLPRSILLA*GVTYKYIIDLP
Trigger: AGGGAGGTCAATGATGTATTTGTACGTGACACCTCATGCAAGAAGAATACTTCGTGGCAACATTGGAGGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR-3UTR CAA 90 bp GTAATTTGTAATCAGAAGATGCTTGAGTTCCATCATTTGCATTACCTACCTGTGGCAAGCGGATGTTGTTaGCTTAGGGGACGAGAAGAG +
Preference number: 3 (lower is better)
Translates to: VICNQKMLEFHHLHYLPVASGCC*LRGREE
Trigger: CTCTTCTCGTCCCCTAAGCAAACAACATCCGCTTGC...CACAGGTAGGTAATGCAAATGATGGAACTCAAGCATCTTCTGATTACAAATTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR-3UTR CAA 90 bp TTTAAGATCCAAGGCATTTCTTTAGCTACTAATATACTCCGGAATGTTCCTTTCCGCTCTGTTTCTGGTTaGTGCAACAGGGGCTCAGAG +
Preference number: 3 (lower is better)
Translates to: FKIQGISLATNILRNVPFRSVSG*CNRGSE
Trigger: CTCTGAGCCCCTGTTGCACAAACCAGAAACAGAGCG...GAAAGGAACATTCCGGAGTATATTAGTAGCTAAAGAAATGCCTTGGATCTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR-3UTR CAA 90 bp GTAATTTGTAATCAGAAGATGCTTGAGTTCCATCATTTGCATTACCTACCTGTGATTCACTTCCTCAGCTaGTGTCCCCAGAAAAGCACC +
Preference number: 3 (lower is better)
Translates to: VICNQKMLEFHHLHYLPVIHFLS*CPQKST
Trigger: GGTGCTTTTCTGGGGACACAAGCTGAGGAAGTGAAT...CACAGGTAGGTAATGCAAATGATGGAACTCAAGCATCTTCTGATTACAAATTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR-3UTR CAA 90 bp CCAATAAAAGTGAGTGGAATTTGCACTTGCATTGTCATTTTCCTGCAAGAATGGATCTGTATTCCACCATaGGTTGGGATACCAAAGTGC +
Preference number: 3 (lower is better)
Translates to: PIKVSGICTCIVIFLQEWICIPP*VGIPKC
Trigger: GCACTTTGGTATCCCAACCAATGGTGGAATACAGAT...CCATTCTTGCAGGAAAATGACAATGCAAGTGCAAATTCCACTCACTTTTATTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR-3UTR CAA 90 bp GTGTGCCAGGAAAACTACTACAAAGAATCAACGGATGTAGTGAAATCTGCATCAGAGTGGAATTTGCACTaGCATTGTCATTTTCCTGCA +
Preference number: 3 (lower is better)
Translates to: VCQENYYKESTDVVKSASEWNLH*HCHFPA
Trigger: TGCAGGAAAATGACAATGCAAGTGCAAATTCCACTC...TGATGCAGATTTCACTACATCCGTTGATTCTTTGTAGTAGTTTTCCTGGCACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR-3UTR CAA 90 bp TTTAAGATCCAAGGCATTTCTTTAGCTACTAATATACTCCGGAATGTTCCTTTCTTGGGAAAGGAGTCGTaGCCTATTTGGATCCTCTGC +
Preference number: 3 (lower is better)
Translates to: FKIQGISLATNILRNVPFLGKES*PIWILC
Trigger: GCAGAGGATCCAAATAGGCAACGACTCCTTTCCCAA...GAAAGGAACATTCCGGAGTATATTAGTAGCTAAAGAAATGCCTTGGATCTTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR-3UTR CAA 90 bp TTTAAGATCCAAGGCATTTCTTTAGCTACTAATATACTCCGGAATGTTCCTTTCTGGTTGTGTCCTTGTTaGGATTCAGGCCCATCTGTT +
Preference number: 3 (lower is better)
Translates to: FKIQGISLATNILRNVPFWLCPC*DSGPSV
Trigger: AACAGATGGGCCTGAATCCAAACAAGGACACAACCA...GAAAGGAACATTCCGGAGTATATTAGTAGCTAAAGAAATGCCTTGGATCTTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR-3UTR CAA 90 bp TGTTGTTCAGATATCAAATACCATATGCCAATTCAGGTATTTGGCACATGGGTCTATTATGGAGAGCACTaGTTTGTTCAGCTAAAAAGG +
Preference number: 3 (lower is better)
Translates to: CCSDIKYHMPIQVFGTWVYYGEH*FVQLKR
Trigger: CCTTTTTAGCTGAACAAACAAGTGCTCTCCATAATA...GACCCATGTGCCAAATACCTGAATTGGCATATGGTATTTGATATCTGAACAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR GCA 72 bp ATTGTCATACCAATAAAAGTGAGTGGAATTTGCACTTaGATTGTCATTTTCCTGCAAGAATGGAAACGCCTA +
Preference number: 3 (lower is better)
Translates to: IVIPIKVSGICT*IVIFLQEWKRL
Trigger: TAGGCGTTTCCATTCTTGCAGGAAAATGACAATGCAAGTGCAAATTCCACTCACTTTTATTGGTATGACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR-3UTR CAA 90 bp TTTAAGATCCAAGGCATTTCTTTAGCTACTAATATACTCCGGAATGTTCCTTTCTTTAAGCCTCCAATGTaGCCACGAAGTATTCTTCTT +
Preference number: 3 (lower is better)
Translates to: FKIQGISLATNILRNVPFFKPPM*PRSILL
Trigger: AAGAAGAATACTTCGTGGCAACATTGGAGGCTTAAA...GAAAGGAACATTCCGGAGTATATTAGTAGCTAAAGAAATGCCTTGGATCTTAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR-3UTR CAA 90 bp TTTAAGATCCAAGGCATTTCTTTAGCTACTAATATACTCCGGAATGTTCCTTTCTTTCCTGTCATTCTTTaGTTTCTGCTATCTGCCTAT +
Preference number: 3 (lower is better)
Translates to: FKIQGISLATNILRNVPFFPVIL*FLLSAY
Trigger: ATAGGCAGATAGCAGAAACAAAAGAATGACAGGAAA...GAAAGGAACATTCCGGAGTATATTAGTAGCTAAAGAAATGCCTTGGATCTTAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR-3UTR CAA 90 bp TTTAAGATCCAAGGCATTTCTTTAGCTACTAATATACTCCGGAATGTTCCTTTCTTTAATCTGAATGTCTaGTCTGTGGTAAACATAGCC +
Preference number: 3 (lower is better)
Translates to: FKIQGISLATNILRNVPFFNLNV*SVVNIA
Trigger: GGCTATGTTTACCACAGACAAGACATTCAGATTAAA...GAAAGGAACATTCCGGAGTATATTAGTAGCTAAAGAAATGCCTTGGATCTTAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR CCA 72 bp ATAACTAAATTTTGTTCACTAAGAGGACCTTTTCTATaGATTTCCTTCATCTCTCAGTCACACTGCAAACTT +
Preference number: 3 (lower is better)
Translates to: ITKFCSLRGPFL*ISFISQSHCKL
Trigger: AAGTTTGCAGTGTGACTGAGAGATGAAGGAAATCCATAGAAAAGGTCCTCTTAGTGAACAAAATTTAGTTAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CCA 90 bp GCCCACCAAGCGTGCACACCCATTCACTGTGGTTACACAGACAGAAGCAAGCGGCCGGGCCGAATCGCCTaGGCTGGGCCTCCCGAGAGC +
Preference number: 4 (lower is better)
Translates to: AHQACTPIHCGYTDRSKRPGRIA*AGPPES
Trigger: GCTCTCGGGAGGCCCAGCCCAGGCGATTCGGCCCGG...CCGCTTGCTTCTGTCTGTGTAACCACAGTGAATGGGTGTGCACGCTTGGTGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR GCA 90 bp GCAAGCGGATGTTGTTTGCTTAGGGGACGAGAAGAGGGCGAGGGAAAGGAAAGGATGCCGCGCCTCCGCTaGCCACTGACGGCGCCCGGA +
Preference number: 4 (lower is better)
Translates to: ASGCCLLRGREEGEGKERMPRLR*PLTAPG
Trigger: TCCGGGCGCCGTCAGTGGGCAGCGGAGGCGCGGCAT...CCTTTCCTTTCCCTCGCCCTCTTCTCGTCCCCTAAGCAAACAACATCCGCTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR GCA 90 bp GCAAGCGGATGTTGTTTGCTTAGGGGACGAGAAGAGGGCGAGGGAAAGGAAAGGGCGAGGACTCCCCCATaGTCGCCAGGAGCGCGGGCC +
Preference number: 4 (lower is better)
Translates to: ASGCCLLRGREEGEGKERARTPP*SPGARA
Trigger: GGCCCGCGCTCCTGGCGAGCATGGGGGAGTCCTCGC...CCTTTCCTTTCCCTCGCCCTCTTCTCGTCCCCTAAGCAAACAACATCCGCTTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CCA 90 bp GCCCACCAAGCGTGCACACCCATTCACTGTGGTTACACAGACAGAAGCAAGCGGGCTCCTGCTCCGCGCTaGCTCTCCCAGAGTCCGGAG +
Preference number: 4 (lower is better)
Translates to: AHQACTPIHCGYTDRSKRAPAPR*LSQSPE
Trigger: CTCCGGACTCTGGGAGAGCCAGCGCGGAGCAGGAGC...CCGCTTGCTTCTGTCTGTGTAACCACAGTGAATGGGTGTGCACGCTTGGTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR CAA 72 bp CTTGTCAGGCCCCCTTGGCTCCGCTCTGTTTCTGGTTaGTGCAACAGGGGCTCAGAGGCCCACCAAGCGTGC +
Preference number: 4 (lower is better)
Translates to: LVRPPWLRSVSG*CNRGSEAHQAC
Trigger: GCACGCTTGGTGGGCCTCTGAGCCCCTGTTGCACAAACCAGAAACAGAGCGGAGCCAAGGGGGCCTGACAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR GCA 90 bp GCAAGCGGATGTTGTTTGCTTAGGGGACGAGAAGAGGGCGAGGGAAAGGAAAGGTGCTGCCGCTGCTGCTaGTGGTGCTCCTTGTCCCGG +
Preference number: 4 (lower is better)
Translates to: ASGCCLLRGREEGEGKERCCRCC*WCSLSR
Trigger: CCGGGACAAGGAGCACCAGCAGCAGCAGCGGCAGCA...CCTTTCCTTTCCCTCGCCCTCTTCTCGTCCCCTAAGCAAACAACATCCGCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR GCA 90 bp GCCCACCAAGCGTGCACACCCATTCACTGTGGTTACACAGACAGAAGCAAGCGGTGCTGCTGCTGCCGCTaGTGCTGCTGGTGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: AHQACTPIHCGYTDRSKRCCCCR*CCWCSL
Trigger: CAAGGAGCACCAGCAGCAGCAGCGGCAGCAGCAGCA...CCGCTTGCTTCTGTCTGTGTAACCACAGTGAATGGGTGTGCACGCTTGGTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR GCA 90 bp GCCCACCAAGCGTGCACACCCATTCACTGTGGTTACACAGACAGAAGCAAGCGGTCACGGCGGGCCAGCTaGTGCTGTGGTGACACTCGT +
Preference number: 4 (lower is better)
Translates to: AHQACTPIHCGYTDRSKRSRRAS*CCGDTR
Trigger: ACGAGTGTCACCACAGCAGCAGCTGGCCCGCCGTGA...CCGCTTGCTTCTGTCTGTGTAACCACAGTGAATGGGTGTGCACGCTTGGTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CCA 90 bp GCAAGCGGATGTTGTTTGCTTAGGGGACGAGAAGAGGGCGAGGGAAAGGAAAGGCCCGACTCCAGTTCCTaGCGCACACCGCGTCCGCAT +
Preference number: 4 (lower is better)
Translates to: ASGCCLLRGREEGEGKERPDSSS*RTPRPH
Trigger: ATGCGGACGCGGTGTGCGCCAGGAACTGGAGTCGGG...CCTTTCCTTTCCCTCGCCCTCTTCTCGTCCCCTAAGCAAACAACATCCGCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR GCA 90 bp GCCCACCAAGCGTGCACACCCATTCACTGTGGTTACACAGACAGAAGCAAGCGGGAGGCCCACCAAGCGTaGACACCCATTCACTGTGGT +
Preference number: 4 (lower is better)
Translates to: AHQACTPIHCGYTDRSKREAHQA*TPIHCG
Trigger: ACCACAGTGAATGGGTGTGCACGCTTGGTGGGCCTC...CCGCTTGCTTCTGTCTGTGTAACCACAGTGAATGGGTGTGCACGCTTGGTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR TCA 90 bp GCCCACCAAGCGTGCACACCCATTCACTGTGGTTACACAGACAGAAGCAAGCGGACGCTGAAGAGATGGTaGGATGGCACATGGAGTGGC +
Preference number: 4 (lower is better)
Translates to: AHQACTPIHCGYTDRSKRTLKRW*DGTWSG
Trigger: GCCACTCCATGTGCCATCTCACCATCTCTTCAGCGT...CCGCTTGCTTCTGTCTGTGTAACCACAGTGAATGGGTGTGCACGCTTGGTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR TCA 90 bp GCAAGCGGATGTTGTTTGCTTAGGGGACGAGAAGAGGGCGAGGGAAAGGAAAGGGACAGTCGCCATTTCTaGGCCCTCTCGGAATCGATG +
Preference number: 4 (lower is better)
Translates to: ASGCCLLRGREEGEGKERDSRHF*ALSESM
Trigger: CATCGATTCCGAGAGGGCTCAGAAATGGCGACTGTC...CCTTTCCTTTCCCTCGCCCTCTTCTCGTCCCCTAAGCAAACAACATCCGCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR TCA 90 bp GCCCACCAAGCGTGCACACCCATTCACTGTGGTTACACAGACAGAAGCAAGCGGGTGAGCGATGTCCTGTaGCAGGAGCCACTTTTCTCT +
Preference number: 4 (lower is better)
Translates to: AHQACTPIHCGYTDRSKRVSDVL*QEPLFS
Trigger: AGAGAAAAGTGGCTCCTGTCACAGGACATCGCTCAC...CCGCTTGCTTCTGTCTGTGTAACCACAGTGAATGGGTGTGCACGCTTGGTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR TCA 90 bp GCCCACCAAGCGTGCACACCCATTCACTGTGGTTACACAGACAGAAGCAAGCGGCTCTTCAAGTGTGTCTaGGACCTAGGGATCCCACTG +
Preference number: 4 (lower is better)
Translates to: AHQACTPIHCGYTDRSKRLFKCV*DLGIPL
Trigger: CAGTGGGATCCCTAGGTCTCAGACACACTTGAAGAG...CCGCTTGCTTCTGTCTGTGTAACCACAGTGAATGGGTGTGCACGCTTGGTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR TCA 90 bp GCCCACCAAGCGTGCACACCCATTCACTGTGGTTACACAGACAGAAGCAAGCGGCAGGAGCAGTCCCTATaGGCAAGCCAATCCAGTTTC +
Preference number: 4 (lower is better)
Translates to: AHQACTPIHCGYTDRSKRQEQSL*ASQSSF
Trigger: GAAACTGGATTGGCTTGCTCATAGGGACTGCTCCTG...CCGCTTGCTTCTGTCTGTGTAACCACAGTGAATGGGTGTGCACGCTTGGTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CCA 90 bp GCCCACCAAGCGTGCACACCCATTCACTGTGGTTACACAGACAGAAGCAAGCGGAGATGGCACATGGAGTaGCCTTACCACAGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: AHQACTPIHCGYTDRSKRRWHME*PYHSRG
Trigger: ACCTCTGCTGTGGTAAGGCCACTCCATGTGCCATCT...CCGCTTGCTTCTGTCTGTGTAACCACAGTGAATGGGTGTGCACGCTTGGTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR TCA 90 bp GCCCACCAAGCGTGCACACCCATTCACTGTGGTTACACAGACAGAAGCAAGCGGCAATGCTGGCTGACTTaGTGGGGAGAAAGGACTCAT +
Preference number: 4 (lower is better)
Translates to: AHQACTPIHCGYTDRSKRQCWLT*WGERTH
Trigger: ATGAGTCCTTTCTCCCCATCAAGTCAGCCAGCATTG...CCGCTTGCTTCTGTCTGTGTAACCACAGTGAATGGGTGTGCACGCTTGGTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CCA 90 bp GTGTGCCAGGAAAACTACTACAAAGAATCAACGGATGTAGTGAAATCTGCATCAGGAGGCTGGTGCTGGTaGCCGGCGGCGAGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: VCQENYYKESTDVVKSASGGWCW*PAARLG
Trigger: ACCCAGCCTCGCCGCCGGCCACCAGCACCAGCCTCC...TGATGCAGATTTCACTACATCCGTTGATTCTTTGTAGTAGTTTTCCTGGCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR TCA 90 bp GCAAGCGGATGTTGTTTGCTTAGGGGACGAGAAGAGGGCGAGGGAAAGGAAAGGTTTCTTCCAGCGTGTTaGTGCCTCCAAAGCTCAGTC +
Preference number: 4 (lower is better)
Translates to: ASGCCLLRGREEGEGKERFLPAC*CLQSSV
Trigger: GACTGAGCTTTGGAGGCATCAACACGCTGGAAGAAA...CCTTTCCTTTCCCTCGCCCTCTTCTCGTCCCCTAAGCAAACAACATCCGCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR TCA 90 bp GCCCACCAAGCGTGCACACCCATTCACTGTGGTTACACAGACAGAAGCAAGCGGGTACAAATACATCATTaGCCTCCCTGTGTCACCTGG +
Preference number: 4 (lower is better)
Translates to: AHQACTPIHCGYTDRSKRVQIHH*PPCVTW
Trigger: CCAGGTGACACAGGGAGGTCAATGATGTATTTGTAC...CCGCTTGCTTCTGTCTGTGTAACCACAGTGAATGGGTGTGCACGCTTGGTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR GCA 90 bp AAATGTGTTAACTGTCTGATTCCACCTATTATGGAGAGCACTTGTTTGTTCAGCCAGCCCGCTCTCCCCTaGCAGGGGCATGCCGCGCCT +
Preference number: 4 (lower is better)
Translates to: KCVNCLIPPIMESTCLFSQPALP*QGHAAP
Trigger: AGGCGCGGCATGCCCCTGGCAGGGGAGAGCGGGCTG...GCTGAACAAACAAGTGCTCTCCATAATAGGTGGAATCAGACAGTTAACACATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR GCA 90 bp GCCCACCAAGCGTGCACACCCATTCACTGTGGTTACACAGACAGAAGCAAGCGGTCCTCAGGAATCACTTaGAGCCTCAATTCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: AHQACTPIHCGYTDRSKRSSGIT*SLNSSA
Trigger: AGCAGAGGAATTGAGGCTGCAAGTGATTCCTGAGGA...CCGCTTGCTTCTGTCTGTGTAACCACAGTGAATGGGTGTGCACGCTTGGTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR GCA 90 bp GCAAGCGGATGTTGTTTGCTTAGGGGACGAGAAGAGGGCGAGGGAAAGGAAAGGTTGAAGCAGCAGTGCTaGGGTGAGCTGGGAGTTTTA +
Preference number: 4 (lower is better)
Translates to: ASGCCLLRGREEGEGKERLKQQC*GELGVL
Trigger: TAAAACTCCCAGCTCACCGCAGCACTGCTGCTTCAA...CCTTTCCTTTCCCTCGCCCTCTTCTCGTCCCCTAAGCAAACAACATCCGCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CCA 90 bp TGTTGTTCAGATATCAAATACCATATGCCAATTCAGGTATTTGGCACATGGGTCGGAGGAGGCTGGTGCTaGTGGCCGGCGGCGAGGCTG +
Preference number: 4 (lower is better)
Translates to: CCSDIKYHMPIQVFGTWVGGGWC*WPAARL
Trigger: CAGCCTCGCCGCCGGCCACCAGCACCAGCCTCCTCC...GACCCATGTGCCAAATACCTGAATTGGCATATGGTATTTGATATCTGAACAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CCA 90 bp ATTCACTTCCTCAGCTTGTGTCCCCAGAAAAGCACCATGTTTCCATACACTAAATCCACCGTGAAGCACTaGCCCGAGGACGCGCCCTGG +
Preference number: 4 (lower is better)
Translates to: IHFLSLCPQKSTMFPYTKSTVKH*PEDAPW
Trigger: CCAGGGCGCGTCCTCGGGCCAGTGCTTCACGGTGGA...TTTAGTGTATGGAAACATGGTGCTTTTCTGGGGACACAAGCTGAGGAAGTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CCA 90 bp GCCCACCAAGCGTGCACACCCATTCACTGTGGTTACACAGACAGAAGCAAGCGGCTCATCCCTAAACCATaGCTTTGCCCTAAGATCCTG +
Preference number: 4 (lower is better)
Translates to: AHQACTPIHCGYTDRSKRLIPKP*LCPKIL
Trigger: CAGGATCTTAGGGCAAAGCCATGGTTTAGGGATGAG...CCGCTTGCTTCTGTCTGTGTAACCACAGTGAATGGGTGTGCACGCTTGGTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR CAA 72 bp GTAAAAGCACCCAGTTTCTGTTACATGAGACAGCAGTaGCCATTTTTCACGGCGGGCCAGCTGCTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: VKAPSFCYMRQQ*PFFTAGQLLLW
Trigger: CCACAGCAGCAGCTGGCCCGCCGTGAAAAATGGCAACTGCTGTCTCATGTAACAGAAACTGGGTGCTTTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR GCA 90 bp GTAATTTGTAATCAGAAGATGCTTGAGTTCCATCATTTGCATTACCTACCTGTGGACGGAGGAGGCTGGTaGTGGTGGCCGGCGGCGAGG +
Preference number: 4 (lower is better)
Translates to: VICNQKMLEFHHLHYLPVDGGGW*WWPAAR
Trigger: CCTCGCCGCCGGCCACCAGCACCAGCCTCCTCCGTC...CACAGGTAGGTAATGCAAATGATGGAACTCAAGCATCTTCTGATTACAAATTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR GCA 90 bp GCCCACCAAGCGTGCACACCCATTCACTGTGGTTACACAGACAGAAGCAAGCGGGTCCAGTGGAAATATTaGGGGAAAGTGGTTACACAC +
Preference number: 4 (lower is better)
Translates to: AHQACTPIHCGYTDRSKRVQWKY*GKVVTH
Trigger: GTGTGTAACCACTTTCCCGCAATATTTCCACTGGAC...CCGCTTGCTTCTGTCTGTGTAACCACAGTGAATGGGTGTGCACGCTTGGTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR GCA 90 bp GCAAGCGGATGTTGTTTGCTTAGGGGACGAGAAGAGGGCGAGGGAAAGGAAAGGCCTAAACCATGGCTTTaGCCTAAGATCCTGTGCCTT +
Preference number: 4 (lower is better)
Translates to: ASGCCLLRGREEGEGKERPKPWL*PKILCL
Trigger: AAGGCACAGGATCTTAGGGCAAAGCCATGGTTTAGG...CCTTTCCTTTCCCTCGCCCTCTTCTCGTCCCCTAAGCAAACAACATCCGCTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CCA 90 bp CCAATAAAAGTGAGTGGAATTTGCACTTGCATTGTCATTTTCCTGCAAGAATGGAGAGACGGAGGAGGCTaGTGCTGGTGGCCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: PIKVSGICTCIVIFLQEWRDGGG*CWWPAA
Trigger: CGCCGCCGGCCACCAGCACCAGCCTCCTCCGTCTCT...CCATTCTTGCAGGAAAATGACAATGCAAGTGCAAATTCCACTCACTTTTATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CCA 90 bp GCAAGCGGATGTTGTTTGCTTAGGGGACGAGAAGAGGGCGAGGGAAAGGAAAGGGTGTTGTTGGTTCTGTaGGTAGAAGGGAGACTTAGG +
Preference number: 4 (lower is better)
Translates to: ASGCCLLRGREEGEGKERVLLVL*VEGRLR
Trigger: CCTAAGTCTCCCTTCTACCCACAGAACCAACAACAC...CCTTTCCTTTCCCTCGCCCTCTTCTCGTCCCCTAAGCAAACAACATCCGCTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CCA 90 bp GCCCACCAAGCGTGCACACCCATTCACTGTGGTTACACAGACAGAAGCAAGCGGCTTGGGGATGGGAACTaGAGCAATACAGTTCATGAT +
Preference number: 4 (lower is better)
Translates to: AHQACTPIHCGYTDRSKRLGDGN*SNTVHD
Trigger: ATCATGAACTGTATTGCTCCAGTTCCCATCCCCAAG...CCGCTTGCTTCTGTCTGTGTAACCACAGTGAATGGGTGTGCACGCTTGGTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR TCA 90 bp GCCCACCAAGCGTGCACACCCATTCACTGTGGTTACACAGACAGAAGCAAGCGGGACTTAGTTTACCTCTaGGAAACCATCCCCCAAAAT +
Preference number: 4 (lower is better)
Translates to: AHQACTPIHCGYTDRSKRDLVYL*ETIPQN
Trigger: ATTTTGGGGGATGGTTTCTCAGAGGTAAACTAAGTC...CCGCTTGCTTCTGTCTGTGTAACCACAGTGAATGGGTGTGCACGCTTGGTGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR TCA 90 bp GCCCACCAAGCGTGCACACCCATTCACTGTGGTTACACAGACAGAAGCAAGCGGTGTACACTCAGCAGGTaGAATGTTCCCACAAAGAAA +
Preference number: 4 (lower is better)
Translates to: AHQACTPIHCGYTDRSKRCTLSR*NVPTKK
Trigger: TTTCTTTGTGGGAACATTTCACCTGCTGAGTGTACA...CCGCTTGCTTCTGTCTGTGTAACCACAGTGAATGGGTGTGCACGCTTGGTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR TCA 90 bp GCCCACCAAGCGTGCACACCCATTCACTGTGGTTACACAGACAGAAGCAAGCGGAATCTGCATCATCAGTaGTTGTTTCTGAGCTTGGGA +
Preference number: 4 (lower is better)
Translates to: AHQACTPIHCGYTDRSKRNLHHQ*LFLSLG
Trigger: TCCCAAGCTCAGAAACAATCACTGATGATGCAGATT...CCGCTTGCTTCTGTCTGTGTAACCACAGTGAATGGGTGTGCACGCTTGGTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR GCA 90 bp TTTAAGATCCAAGGCATTTCTTTAGCTACTAATATACTCCGGAATGTTCCTTTCGGCGGCGAGGCTGGGTaGAGGGGGCGATGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: FKIQGISLATNILRNVPFGGEAG*RGRWWR
Trigger: CCTCCACCATCGCCCCCTGCACCCAGCCTCGCCGCC...GAAAGGAACATTCCGGAGTATATTAGTAGCTAAAGAAATGCCTTGGATCTTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR GCA 90 bp GTAATTTGTAATCAGAAGATGCTTGAGTTCCATCATTTGCATTACCTACCTGTGCGCTGCTGCTGCTGGTaGTCCTTGTCCCGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: VICNQKMLEFHHLHYLPVRCCCW*SLSRAR
Trigger: CCGGGCCCGGGACAAGGAGCACCAGCAGCAGCAGCG...CACAGGTAGGTAATGCAAATGATGGAACTCAAGCATCTTCTGATTACAAATTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR GCA 90 bp TTTAAGATCCAAGGCATTTCTTTAGCTACTAATATACTCCGGAATGTTCCTTTCGGCCAGGAGGGCTCCTaGTGCCGCCGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: FKIQGISLATNILRNVPFGQEGS*CRRCCC
Trigger: GCAGCAGCAGCGGCGGCAGCAGGAGCCCTCCTGGCC...GAAAGGAACATTCCGGAGTATATTAGTAGCTAAAGAAATGCCTTGGATCTTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR GCA 90 bp AAATGTGTTAACTGTCTGATTCCACCTATTATGGAGAGCACTTGTTTGTTCAGCGGAGAGGAGTCTGTGTaGCTGGGCGGCGGGCGAGGA +
Preference number: 4 (lower is better)
Translates to: KCVNCLIPPIMESTCLFSGEESV*LGGGRG
Trigger: TCCTCGCCCGCCGCCCAGGCACACAGACTCCTCTCC...GCTGAACAAACAAGTGCTCTCCATAATAGGTGGAATCAGACAGTTAACACATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CCA 90 bp TGTTGTTCAGATATCAAATACCATATGCCAATTCAGGTATTTGGCACATGGGTCCCGAATCGCCTGGGCTaGGCCTCCCGAGAGCCACAG +
Preference number: 4 (lower is better)
Translates to: CCSDIKYHMPIQVFGTWVPNRLG*ASREPQ
Trigger: CTGTGGCTCTCGGGAGGCCCAGCCCAGGCGATTCGG...GACCCATGTGCCAAATACCTGAATTGGCATATGGTATTTGATATCTGAACAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR CAA 72 bp ACTGTGGTTACACAGACAGAAGCAAGCGGATGTTGTTaGCTTAGGGGACGAGAAGAGGGCGAGGGAAAGGAA +
Preference number: 4 (lower is better)
Translates to: TVVTQTEASGCC*LRGREEGEGKE
Trigger: TTCCTTTCCCTCGCCCTCTTCTCGTCCCCTAAGCAAACAACATCCGCTTGCTTCTGTCTGTGTAACCACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR TCA 90 bp TTTAAGATCCAAGGCATTTCTTTAGCTACTAATATACTCCGGAATGTTCCTTTCTGGCCGACTCCACCGTaGGGGCGCCTGTGCCGGTGT +
Preference number: 4 (lower is better)
Translates to: FKIQGISLATNILRNVPFWPTPP*GRLCRC
Trigger: ACACCGGCACAGGCGCCCTCACGGTGGAGTCGGCCA...GAAAGGAACATTCCGGAGTATATTAGTAGCTAAAGAAATGCCTTGGATCTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR TCA 90 bp CCAATAAAAGTGAGTGGAATTTGCACTTGCATTGTCATTTTCCTGCAAGAATGGCCGCATTCTCCACCGTaGAGCACTGGCCCGAGGACG +
Preference number: 4 (lower is better)
Translates to: PIKVSGICTCIVIFLQEWPHSPP*STGPRT
Trigger: CGTCCTCGGGCCAGTGCTTCACGGTGGAGAATGCGG...CCATTCTTGCAGGAAAATGACAATGCAAGTGCAAATTCCACTCACTTTTATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR TCA 90 bp GCCCACCAAGCGTGCACACCCATTCACTGTGGTTACACAGACAGAAGCAAGCGGGTATCTGTCCACATGTaGATGTATTTGCATTTGCAG +
Preference number: 4 (lower is better)
Translates to: AHQACTPIHCGYTDRSKRVSVHM*MYLHLQ
Trigger: CTGCAAATGCAAATACATTCACATGTGGACAGATAC...CCGCTTGCTTCTGTCTGTGTAACCACAGTGAATGGGTGTGCACGCTTGGTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR GCA 90 bp TTTAAGATCCAAGGCATTTCTTTAGCTACTAATATACTCCGGAATGTTCCTTTCTCCGCCTCCCGCTCCTaGTCCGCGCTGGCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: FKIQGISLATNILRNVPFSASRS*SALALP
Trigger: TGGGAGAGCCAGCGCGGAGCAGGAGCGGGAGGCGGA...GAAAGGAACATTCCGGAGTATATTAGTAGCTAAAGAAATGCCTTGGATCTTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR GCA 90 bp ATTCACTTCCTCAGCTTGTGTCCCCAGAAAAGCACCATGTTTCCATACACTAAACAGAGCGGAGTGGGATaGTTGCTCCTCACCTCCTGC +
Preference number: 4 (lower is better)
Translates to: IHFLSLCPQKSTMFPYTKQSGVG*LLLTSC
Trigger: GCAGGAGGTGAGGAGCAAGCATCCCACTCCGCTCTG...TTTAGTGTATGGAAACATGGTGCTTTTCTGGGGACACAAGCTGAGGAAGTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR GCA 90 bp ATTCACTTCCTCAGCTTGTGTCCCCAGAAAAGCACCATGTTTCCATACACTAAATCCGGCTGTGTTCTGTaGTGCCGAGGCTGTGAGCAC +
Preference number: 4 (lower is better)
Translates to: IHFLSLCPQKSTMFPYTKSGCVL*CRGCEH
Trigger: GTGCTCACAGCCTCGGCAGCACAGAACACAGCCGGA...TTTAGTGTATGGAAACATGGTGCTTTTCTGGGGACACAAGCTGAGGAAGTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR GCA 90 bp CCAATAAAAGTGAGTGGAATTTGCACTTGCATTGTCATTTTCCTGCAAGAATGGCGGCGGGCCAGCTGCTaGTGTGGTGACACTCGTCCT +
Preference number: 4 (lower is better)
Translates to: PIKVSGICTCIVIFLQEWRRASC*CGDTRP
Trigger: AGGACGAGTGTCACCACAGCAGCAGCTGGCCCGCCG...CCATTCTTGCAGGAAAATGACAATGCAAGTGCAAATTCCACTCACTTTTATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CCA 90 bp GTAATTTGTAATCAGAAGATGCTTGAGTTCCATCATTTGCATTACCTACCTGTGGTGGAGGTGACAGGGTaGCTGGCGCGGCTCCGGTCA +
Preference number: 4 (lower is better)
Translates to: VICNQKMLEFHHLHYLPVVEVTG*LARLRS
Trigger: TGACCGGAGCCGCGCCAGCCACCCTGTCACCTCCAC...CACAGGTAGGTAATGCAAATGATGGAACTCAAGCATCTTCTGATTACAAATTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CCA 90 bp GTAATTTGTAATCAGAAGATGCTTGAGTTCCATCATTTGCATTACCTACCTGTGGGGCCCGGGTCAGCTTaGCCTCGGCGCAGAACCACA +
Preference number: 4 (lower is better)
Translates to: VICNQKMLEFHHLHYLPVGPGSA*PRRRTT
Trigger: TGTGGTTCTGCGCCGAGGCCAAGCTGACCCGGGCCC...CACAGGTAGGTAATGCAAATGATGGAACTCAAGCATCTTCTGATTACAAATTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CCA 90 bp GTAATTTGTAATCAGAAGATGCTTGAGTTCCATCATTTGCATTACCTACCTGTGTGCCGCTGCTGCTGCTaGTGCTCCTTGTCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: VICNQKMLEFHHLHYLPVCRCCC*CSLSRA
Trigger: GGCCCGGGACAAGGAGCACCAGCAGCAGCAGCGGCA...CACAGGTAGGTAATGCAAATGATGGAACTCAAGCATCTTCTGATTACAAATTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CCA 90 bp GCAAGCGGATGTTGTTTGCTTAGGGGACGAGAAGAGGGCGAGGGAAAGGAAAGGTCTGTATTCCACCATTaGTTGGGATACCAAAGTGCT +
Preference number: 4 (lower is better)
Translates to: ASGCCLLRGREEGEGKERSVFHH*LGYQSA
Trigger: AGCACTTTGGTATCCCAACCAATGGTGGAATACAGA...CCTTTCCTTTCCCTCGCCCTCTTCTCGTCCCCTAAGCAAACAACATCCGCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR CAA 72 bp TGGAGAGCACTTGTTTGTTCAGCTAAAAAGGAACTCTaGTCAGGCCCCCTTGGCTCCGCTCTGTTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: WRALVCSAKKEL*SGPLGSALFLV
Trigger: AACCAGAAACAGAGCGGAGCCAAGGGGGCCTGACAAGAGTTCCTTTTTAGCTGAACAAACAAGTGCTCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR CAA 72 bp ACCTTCTACTTGGCTAGCACGCCAATAACTGGAATCTaGAAGCAGCAGTGCTGCGGTGAGCTGGGAGTTTTA +
Preference number: 4 (lower is better)
Translates to: TFYLASTPITGI*KQQCCGELGVL
Trigger: TAAAACTCCCAGCTCACCGCAGCACTGCTGCTTCAAGATTCCAGTTATTGGCGTGCTAGCCAAGTAGAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR TCA 90 bp GCAAGCGGATGTTGTTTGCTTAGGGGACGAGAAGAGGGCGAGGGAAAGGAAAGGGAACAAAAATCACAATaGAAGCCCACCTTCATTGTC +
Preference number: 4 (lower is better)
Translates to: ASGCCLLRGREEGEGKEREQKSQ*KPTFIV
Trigger: GACAATGAAGGTGGGCTTTCATTGTGATTTTTGTTC...CCTTTCCTTTCCCTCGCCCTCTTCTCGTCCCCTAAGCAAACAACATCCGCTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR TCA 90 bp GCCCACCAAGCGTGCACACCCATTCACTGTGGTTACACAGACAGAAGCAAGCGGCTTTCAGTTCTGTGTTaGTTTAATGCTTTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: AHQACTPIHCGYTDRSKRLSVLC*FNALSS
Trigger: GCTACTCAAAGCATTAAATCAACACAGAACTGAAAG...CCGCTTGCTTCTGTCTGTGTAACCACAGTGAATGGGTGTGCACGCTTGGTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR GCA 90 bp AAATGTGTTAACTGTCTGATTCCACCTATTATGGAGAGCACTTGTTTGTTCAGCGCGGAGTGGGATGCTTaGTCCTCACCTCCTGCCCGT +
Preference number: 4 (lower is better)
Translates to: KCVNCLIPPIMESTCLFSAEWDA*SSPPAR
Trigger: ACGGGCAGGAGGTGAGGAGCAAGCATCCCACTCCGC...GCTGAACAAACAAGTGCTCTCCATAATAGGTGGAATCAGACAGTTAACACATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR GCA 90 bp CCAATAAAAGTGAGTGGAATTTGCACTTGCATTGTCATTTTCCTGCAAGAATGGCCTCGACGCACTGCCTaGAAGTGGTCATCTCGCCGC +
Preference number: 4 (lower is better)
Translates to: PIKVSGICTCIVIFLQEWPRRTA*KWSSRR
Trigger: GCGGCGAGATGACCACTTGCAGGCAGTGCGTCGAGG...CCATTCTTGCAGGAAAATGACAATGCAAGTGCAAATTCCACTCACTTTTATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CCA 90 bp TTTAAGATCCAAGGCATTTCTTTAGCTACTAATATACTCCGGAATGTTCCTTTCAGGAGTCTGTGTGCCTaGGCGGCGGGCGAGGACTCC +
Preference number: 4 (lower is better)
Translates to: FKIQGISLATNILRNVPFRSLCA*AAGEDS
Trigger: GGAGTCCTCGCCCGCCGCCCAGGCACACAGACTCCT...GAAAGGAACATTCCGGAGTATATTAGTAGCTAAAGAAATGCCTTGGATCTTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR TCA 90 bp GCAAGCGGATGTTGTTTGCTTAGGGGACGAGAAGAGGGCGAGGGAAAGGAAAGGTTCTACTACCACTGTTaGTCAATTTACACTTGCTTG +
Preference number: 4 (lower is better)
Translates to: ASGCCLLRGREEGEGKERFYYHC*SIYTCL
Trigger: CAAGCAAGTGTAAATTGATCAACAGTGGTAGTAGAA...CCTTTCCTTTCCCTCGCCCTCTTCTCGTCCCCTAAGCAAACAACATCCGCTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR GCA 90 bp ATTCACTTCCTCAGCTTGTGTCCCCAGAAAAGCACCATGTTTCCATACACTAAAAAGCCGTCGTCATACTaGCGACACATCCAAGCACCC +
Preference number: 4 (lower is better)
Translates to: IHFLSLCPQKSTMFPYTKKPSSY*RHIQAP
Trigger: GGGTGCTTGGATGTGTCGGCAGTATGACGACGGCTT...TTTAGTGTATGGAAACATGGTGCTTTTCTGGGGACACAAGCTGAGGAAGTGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR GCA 90 bp AATAAAAGTGAGTGGAATTTGCACTTGCATTGTCATTTTCCTGCAAGAATGGAATGCCCCGGTCGTCTTTaGCTCGGTTGCCCTTGCCGC +
Preference number: 4 (lower is better)
Translates to: NKSEWNLHLHCHFPARMECPGRL*LGCPCR
Trigger: GCGGCAAGGGCAACCGAGGCAAAGACGACCGGGGCA...TTCCATTCTTGCAGGAAAATGACAATGCAAGTGCAAATTCCACTCACTTTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR GCA 90 bp GCAAGCGGATGTTGTTTGCTTAGGGGACGAGAAGAGGGCGAGGGAAAGGAAAGGGTTGGGATACCAAAGTaGTCATTTCTACAAGTGTTT +
Preference number: 4 (lower is better)
Translates to: ASGCCLLRGREEGEGKERVGIPK*SFLQVF
Trigger: AAACACTTGTAGAAATGAGCACTTTGGTATCCCAAC...CCTTTCCTTTCCCTCGCCCTCTTCTCGTCCCCTAAGCAAACAACATCCGCTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR GCA 90 bp GCAAGCGGATGTTGTTTGCTTAGGGGACGAGAAGAGGGCGAGGGAAAGGAAAGGGGATGTAGTGAAATCTaGATCATCAGTGATTGTTTC +
Preference number: 4 (lower is better)
Translates to: ASGCCLLRGREEGEGKERGCSEI*IISDCF
Trigger: GAAACAATCACTGATGATGCAGATTTCACTACATCC...CCTTTCCTTTCCCTCGCCCTCTTCTCGTCCCCTAAGCAAACAACATCCGCTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CCA 90 bp ATTCACTTCCTCAGCTTGTGTCCCCAGAAAAGCACCATGTTTCCATACACTAAAAGTTCCAGAGCGGAGTaGGATGCTTGCTCCTCACCT +
Preference number: 4 (lower is better)
Translates to: IHFLSLCPQKSTMFPYTKSSRAE*DACSSP
Trigger: AGGTGAGGAGCAAGCATCCCACTCCGCTCTGGAACT...TTTAGTGTATGGAAACATGGTGCTTTTCTGGGGACACAAGCTGAGGAAGTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CCA 90 bp ATTCACTTCCTCAGCTTGTGTCCCCAGAAAAGCACCATGTTTCCATACACTAAAGCTCCGCTCTGTTTCTaGTTTGTGCAACAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: IHFLSLCPQKSTMFPYTKAPLCF*FVQQGL
Trigger: GAGCCCCTGTTGCACAAACCAGAAACAGAGCGGAGC...TTTAGTGTATGGAAACATGGTGCTTTTCTGGGGACACAAGCTGAGGAAGTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR TCA 90 bp GTAATTTGTAATCAGAAGATGCTTGAGTTCCATCATTTGCATTACCTACCTGTGTCTCGCCGCCTTCCTTaGGCACCACATCCAGACTGC +
Preference number: 4 (lower is better)
Translates to: VICNQKMLEFHHLHYLPVSRRLP*APHPDC
Trigger: GCAGTCTGGATGTGGTGCTCAAGGAAGGCGGCGAGA...CACAGGTAGGTAATGCAAATGATGGAACTCAAGCATCTTCTGATTACAAATTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR TCA 90 bp ATTCACTTCCTCAGCTTGTGTCCCCAGAAAAGCACCATGTTTCCATACACTAAAAGAGGCCTCCGTAGATaGCTTCATCATTGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: IHFLSLCPQKSTMFPYTKRGLRR*LHHCRA
Trigger: TGCCCGACAATGATGAAGTCATCTACGGAGGCCTCT...TTTAGTGTATGGAAACATGGTGCTTTTCTGGGGACACAAGCTGAGGAAGTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR TCA 90 bp TGTTGTTCAGATATCAAATACCATATGCCAATTCAGGTATTTGGCACATGGGTCCGGGGAGAAGCAGCATaGGGAACGCTGAAGAGATGG +
Preference number: 4 (lower is better)
Translates to: CCSDIKYHMPIQVFGTWVRGEAA*GTLKRW
Trigger: CCATCTCTTCAGCGTTCCTCATGCTGCTTCTCCCCG...GACCCATGTGCCAAATACCTGAATTGGCATATGGTATTTGATATCTGAACAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR GCA 90 bp GCAAGCGGATGTTGTTTGCTTAGGGGACGAGAAGAGGGCGAGGGAAAGGAAAGGAAAGTGAGTGGAATTTaGACTTGCATTGTCATTTTC +
Preference number: 4 (lower is better)
Translates to: ASGCCLLRGREEGEGKERKVSGI*TCIVIF
Trigger: GAAAATGACAATGCAAGTGCAAATTCCACTCACTTT...CCTTTCCTTTCCCTCGCCCTCTTCTCGTCCCCTAAGCAAACAACATCCGCTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR GCA 90 bp AAATGTGTTAACTGTCTGATTCCACCTATTATGGAGAGCACTTGTTTGTTCAGCCTAGGGATCCCACTGTaGCTCGGAGCCAGCTTGTGT +
Preference number: 4 (lower is better)
Translates to: KCVNCLIPPIMESTCLFSLGIPL*LGASLC
Trigger: ACACAAGCTGGCTCCGAGGCACAGTGGGATCCCTAG...GCTGAACAAACAAGTGCTCTCCATAATAGGTGGAATCAGACAGTTAACACATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR CAA 72 bp TTCTTCTTGCATGAGGTGTCACGTACAAATACATCATaGACCTCCCTGTGTCACCTGGAGCCAAAGCTCATC +
Preference number: 4 (lower is better)
Translates to: FFLHEVSRTNTS*TSLCHLEPKLI
Trigger: GATGAGCTTTGGCTCCAGGTGACACAGGGAGGTCAATGATGTATTTGTACGTGACACCTCATGCAAGAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR TCA 90 bp TTTAAGATCCAAGGCATTTCTTTAGCTACTAATATACTCCGGAATGTTCCTTTCGCAGCAGTGCTGCGGTaGGCTGGGAGTTTTAGGGGA +
Preference number: 4 (lower is better)
Translates to: FKIQGISLATNILRNVPFAAVLR*AGSFRG
Trigger: TCCCCTAAAACTCCCAGCTCACCGCAGCACTGCTGC...GAAAGGAACATTCCGGAGTATATTAGTAGCTAAAGAAATGCCTTGGATCTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR GCA 90 bp TTTAAGATCCAAGGCATTTCTTTAGCTACTAATATACTCCGGAATGTTCCTTTCGTCCGCGGGCTAAGTTaGCGCCATCTTCGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: FKIQGISLATNILRNVPFVRGLS*RHLRPG
Trigger: TCCAGGACGAAGATGGCGGCAACTTAGCCCGCGGAC...GAAAGGAACATTCCGGAGTATATTAGTAGCTAAAGAAATGCCTTGGATCTTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CCA 90 bp GTGTGCCAGGAAAACTACTACAAAGAATCAACGGATGTAGTGAAATCTGCATCAGGCGCCACACGGGCTTaGCAGAGTTTCCTAGAAAAA +
Preference number: 4 (lower is better)
Translates to: VCQENYYKESTDVVKSASGATRA*QSFLEK
Trigger: TTTTTCTAGGAAACTCTGCCAAGCCCGTGTGGCGCC...TGATGCAGATTTCACTACATCCGTTGATTCTTTGTAGTAGTTTTCCTGGCACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CCA 90 bp GTGTGCCAGGAAAACTACTACAAAGAATCAACGGATGTAGTGAAATCTGCATCATGGGCCACTTGGGGATaGGAACTGGAGCAATACAGT +
Preference number: 4 (lower is better)
Translates to: VCQENYYKESTDVVKSASWATWG*ELEQYS
Trigger: ACTGTATTGCTCCAGTTCCCATCCCCAAGTGGCCCA...TGATGCAGATTTCACTACATCCGTTGATTCTTTGTAGTAGTTTTCCTGGCACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR CAA 72 bp CCCCCAGCGCCATTGAAATCTGTATTCCACCATTGGTaGGGATACCAAAGTGCTCATTTCTACAAGTGTTTC +
Preference number: 4 (lower is better)
Translates to: PPAPLKSVFHHW*GYQSAHFYKCF
Trigger: GAAACACTTGTAGAAATGAGCACTTTGGTATCCCAACCAATGGTGGAATACAGATTTCAATGGCGCTGGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR TCA 90 bp GTAATTTGTAATCAGAAGATGCTTGAGTTCCATCATTTGCATTACCTACCTGTGGCGCAGAACCACAAGTaGTCAGAGAGCAGGACTGTG +
Preference number: 4 (lower is better)
Translates to: VICNQKMLEFHHLHYLPVAQNHK*SESRTV
Trigger: CACAGTCCTGCTCTCTGATCACTTGTGGTTCTGCGC...CACAGGTAGGTAATGCAAATGATGGAACTCAAGCATCTTCTGATTACAAATTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR TCA 90 bp TGTTGTTCAGATATCAAATACCATATGCCAATTCAGGTATTTGGCACATGGGTCAAAGCCCTGTACAGATaGAACTGGAGAGGCCTCCGT +
Preference number: 4 (lower is better)
Translates to: CCSDIKYHMPIQVFGTWVKALYR*NWRGLR
Trigger: ACGGAGGCCTCTCCAGTTTCATCTGTACAGGGCTTT...GACCCATGTGCCAAATACCTGAATTGGCATATGGTATTTGATATCTGAACAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR TCA 90 bp GTAATTTGTAATCAGAAGATGCTTGAGTTCCATCATTTGCATTACCTACCTGTGAAGTGGAGGTTGCAGTaGGCAGAGATCTTGCCGCTG +
Preference number: 4 (lower is better)
Translates to: VICNQKMLEFHHLHYLPVKWRLQ*AEILPL
Trigger: CAGCGGCAAGATCTCTGCTCACTGCAACCTCCACTT...CACAGGTAGGTAATGCAAATGATGGAACTCAAGCATCTTCTGATTACAAATTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR GCA 90 bp TGTTGTTCAGATATCAAATACCATATGCCAATTCAGGTATTTGGCACATGGGTCCTAGAAAAAGAGCCTTaGCCCGGTCGTCTTTGCCTC +
Preference number: 4 (lower is better)
Translates to: CCSDIKYHMPIQVFGTWVLEKEP*PGRLCL
Trigger: GAGGCAAAGACGACCGGGGCAAGGCTCTTTTTCTAG...GACCCATGTGCCAAATACCTGAATTGGCATATGGTATTTGATATCTGAACAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR GCA 90 bp TTTAAGATCCAAGGCATTTCTTTAGCTACTAATATACTCCGGAATGTTCCTTTCGGCTGTGTTCTGTGCTaGCGAGGCTGTGAGCACTGT +
Preference number: 4 (lower is better)
Translates to: FKIQGISLATNILRNVPFGCVLC*RGCEHC
Trigger: ACAGTGCTCACAGCCTCGGCAGCACAGAACACAGCC...GAAAGGAACATTCCGGAGTATATTAGTAGCTAAAGAAATGCCTTGGATCTTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR GCA 90 bp TGTTGTTCAGATATCAAATACCATATGCCAATTCAGGTATTTGGCACATGGGTCTCTGTTTCTGGTTTGTaGAACAGGGGCTCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: CCSDIKYHMPIQVFGTWVSVSGL*NRGSEA
Trigger: GGCCTCTGAGCCCCTGTTGCACAAACCAGAAACAGA...GACCCATGTGCCAAATACCTGAATTGGCATATGGTATTTGATATCTGAACAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR GCA 90 bp CCAATAAAAGTGAGTGGAATTTGCACTTGCATTGTCATTTTCCTGCAAGAATGGATCTTGAAGCAGCAGTaGTGCGGTGAGCTGGGAGTT +
Preference number: 4 (lower is better)
Translates to: PIKVSGICTCIVIFLQEWILKQQ*CGELGV
Trigger: AACTCCCAGCTCACCGCAGCACTGCTGCTTCAAGAT...CCATTCTTGCAGGAAAATGACAATGCAAGTGCAAATTCCACTCACTTTTATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CCA 90 bp TTTAAGATCCAAGGCATTTCTTTAGCTACTAATATACTCCGGAATGTTCCTTTCCCCCTGGTCATATTTTaGGAACGCACAGCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: FKIQGISLATNILRNVPFPLVIF*ERTALA
Trigger: GGCCAGGGCTGTGCGTTCCCAAAATATGACCAGGGG...GAAAGGAACATTCCGGAGTATATTAGTAGCTAAAGAAATGCCTTGGATCTTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CCA 90 bp CCAATAAAAGTGAGTGGAATTTGCACTTGCATTGTCATTTTCCTGCAAGAATGGGAATGGAAACGCCTATaGCACGGGGAGAAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: PIKVSGICTCIVIFLQEWEWKRL*HGEKQH
Trigger: ATGCTGCTTCTCCCCGTGCCATAGGCGTTTCCATTC...CCATTCTTGCAGGAAAATGACAATGCAAGTGCAAATTCCACTCACTTTTATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR TCA 90 bp GTGTGCCAGGAAAACTACTACAAAGAATCAACGGATGTAGTGAAATCTGCATCAAATGGACACCTCGTCTaGACCTCCAAACAGTATTGC +
Preference number: 4 (lower is better)
Translates to: VCQENYYKESTDVVKSASNGHLV*TSKQYC
Trigger: GCAATACTGTTTGGAGGTTCAGACGAGGTGTCCATT...TGATGCAGATTTCACTACATCCGTTGATTCTTTGTAGTAGTTTTCCTGGCACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR TCA 90 bp TGTTGTTCAGATATCAAATACCATATGCCAATTCAGGTATTTGGCACATGGGTCGATCCTTCTCGCCACTaGTTCTATGCAACTCTCACC +
Preference number: 4 (lower is better)
Translates to: CCSDIKYHMPIQVFGTWVDPSRH*FYATLT
Trigger: GGTGAGAGTTGCATAGAATCAGTGGCGAGAAGGATC...GACCCATGTGCCAAATACCTGAATTGGCATATGGTATTTGATATCTGAACAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR GCA 90 bp TGTTGTTCAGATATCAAATACCATATGCCAATTCAGGTATTTGGCACATGGGTCGCACCACATCCAGACTaGAGTTCAAAGTGTTGGGAC +
Preference number: 4 (lower is better)
Translates to: CCSDIKYHMPIQVFGTWVAPHPD*SSKCWD
Trigger: GTCCCAACACTTTGAACTGCAGTCTGGATGTGGTGC...GACCCATGTGCCAAATACCTGAATTGGCATATGGTATTTGATATCTGAACAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR GCA 90 bp GTGTGCCAGGAAAACTACTACAAAGAATCAACGGATGTAGTGAAATCTGCATCACTGATTCTAGATAGCTaGTCCTGTCCAACTGGACCA +
Preference number: 4 (lower is better)
Translates to: VCQENYYKESTDVVKSASLILDS*SCPTGP
Trigger: TGGTCCAGTTGGACAGGAGCAGCTATCTAGAATCAG...TGATGCAGATTTCACTACATCCGTTGATTCTTTGTAGTAGTTTTCCTGGCACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CCA 90 bp TTTAAGATCCAAGGCATTTCTTTAGCTACTAATATACTCCGGAATGTTCCTTTCCTGCTCCTGTCCAACTaGACCAGCAAGAAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: FKIQGISLATNILRNVPFLLLSN*TSKKGL
Trigger: CAGCCCTTTCTTGCTGGTCCAGTTGGACAGGAGCAG...GAAAGGAACATTCCGGAGTATATTAGTAGCTAAAGAAATGCCTTGGATCTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CCA 90 bp TTTAAGATCCAAGGCATTTCTTTAGCTACTAATATACTCCGGAATGTTCCTTTCCCTCCCTGTGTCACCTaGAGCCAAAGCTCATCCCTA +
Preference number: 4 (lower is better)
Translates to: FKIQGISLATNILRNVPFPPCVT*SQSSSL
Trigger: TAGGGATGAGCTTTGGCTCCAGGTGACACAGGGAGG...GAAAGGAACATTCCGGAGTATATTAGTAGCTAAAGAAATGCCTTGGATCTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR TCA 90 bp AATAAAAGTGAGTGGAATTTGCACTTGCATTGTCATTTTCCTGCAAGAATGGAACCCTCTCGGAATCGATaGACGGTTTCTCGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: NKSEWNLHLHCHFPARMEPSRNR*TVSRSL
Trigger: GAGAGAACGAGAAACCGTTCATCGATTCCGAGAGGG...TTCCATTCTTGCAGGAAAATGACAATGCAAGTGCAAATTCCACTCACTTTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR TCA 90 bp TTTAAGATCCAAGGCATTTCTTTAGCTACTAATATACTCCGGAATGTTCCTTTCTTGCTGATGACACTGTaGGCGATGTCCTGTGACAGG +
Preference number: 4 (lower is better)
Translates to: FKIQGISLATNILRNVPFLLMTL*AMSCDR
Trigger: CCTGTCACAGGACATCGCTCACAGTGTCATCAGCAA...GAAAGGAACATTCCGGAGTATATTAGTAGCTAAAGAAATGCCTTGGATCTTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR TCA 90 bp AAATGTGTTAACTGTCTGATTCCACCTATTATGGAGAGCACTTGTTTGTTCAGCTATTCCAATGCTGGCTaGCTTGATGGGGAGAAAGGA +
Preference number: 4 (lower is better)
Translates to: KCVNCLIPPIMESTCLFSYSNAG*LDGEKG
Trigger: TCCTTTCTCCCCATCAAGTCAGCCAGCATTGGAATA...GCTGAACAAACAAGTGCTCTCCATAATAGGTGGAATCAGACAGTTAACACATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR GCA 90 bp GTAATTTGTAATCAGAAGATGCTTGAGTTCCATCATTTGCATTACCTACCTGTGCAAGCGGATGTTGTTTaGTTAGGGGACGAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: VICNQKMLEFHHLHYLPVQADVV*LGDEKR
Trigger: CCTCTTCTCGTCCCCTAAGCAAACAACATCCGCTTG...CACAGGTAGGTAATGCAAATGATGGAACTCAAGCATCTTCTGATTACAAATTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR GCA 90 bp CCAATAAAAGTGAGTGGAATTTGCACTTGCATTGTCATTTTCCTGCAAGAATGGGACCCCAGAAGAAGCTaGTTTGCTTCAACATGTCCA +
Preference number: 4 (lower is better)
Translates to: PIKVSGICTCIVIFLQEWDPRRS*FASTCP
Trigger: TGGACATGTTGAAGCAAAGCAGCTTCTTCTGGGGTC...CCATTCTTGCAGGAAAATGACAATGCAAGTGCAAATTCCACTCACTTTTATTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR GCA 90 bp AATAAAAGTGAGTGGAATTTGCACTTGCATTGTCATTTTCCTGCAAGAATGGAACCAGGAAGTGGAGGTTaGAGTGAGCAGAGATCTTGC +
Preference number: 4 (lower is better)
Translates to: NKSEWNLHLHCHFPARMEPGSGG*SEQRSC
Trigger: GCAAGATCTCTGCTCACTGCAACCTCCACTTCCTGG...TTCCATTCTTGCAGGAAAATGACAATGCAAGTGCAAATTCCACTCACTTTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CCA 90 bp AAATGTGTTAACTGTCTGATTCCACCTATTATGGAGAGCACTTGTTTGTTCAGCACATCCAAGCACCCCTaGTCATATTTTGGGAACGCA +
Preference number: 4 (lower is better)
Translates to: KCVNCLIPPIMESTCLFSTSKHP*SYFGNA
Trigger: TGCGTTCCCAAAATATGACCAGGGGTGCTTGGATGT...GCTGAACAAACAAGTGCTCTCCATAATAGGTGGAATCAGACAGTTAACACATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CCA 90 bp AAATGTGTTAACTGTCTGATTCCACCTATTATGGAGAGCACTTGTTTGTTCAGCTCAAAGTGTTGGGACTaGACAACCCCGAGAACAACT +
Preference number: 4 (lower is better)
Translates to: KCVNCLIPPIMESTCLFSSKCWD*TTPRTT
Trigger: AGTTGTTCTCGGGGTTGTCCAGTCCCAACACTTTGA...GCTGAACAAACAAGTGCTCTCCATAATAGGTGGAATCAGACAGTTAACACATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CCA 90 bp GTAATTTGTAATCAGAAGATGCTTGAGTTCCATCATTTGCATTACCTACCTGTGTGCAGTTCAAAGTGTTaGGACTGGACAACCCCGAGA +
Preference number: 4 (lower is better)
Translates to: VICNQKMLEFHHLHYLPVCSSKC*DWTTPR
Trigger: TCTCGGGGTTGTCCAGTCCCAACACTTTGAACTGCA...CACAGGTAGGTAATGCAAATGATGGAACTCAAGCATCTTCTGATTACAAATTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CCA 90 bp AATAAAAGTGAGTGGAATTTGCACTTGCATTGTCATTTTCCTGCAAGAATGGAAGAGTCGTTGCCTATTTaGATCCTCTGCCTGACCCCA +
Preference number: 4 (lower is better)
Translates to: NKSEWNLHLHCHFPARMEESLPI*ILCLTP
Trigger: TGGGGTCAGGCAGAGGATCCAAATAGGCAACGACTC...TTCCATTCTTGCAGGAAAATGACAATGCAAGTGCAAATTCCACTCACTTTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CCA 90 bp GTAATTTGTAATCAGAAGATGCTTGAGTTCCATCATTTGCATTACCTACCTGTGGCCAATTCAGGTATTTaGCACATGGGTCTGGCATCC +
Preference number: 4 (lower is better)
Translates to: VICNQKMLEFHHLHYLPVANSGI*HMGLAS
Trigger: GGATGCCAGACCCATGTGCCAAATACCTGAATTGGC...CACAGGTAGGTAATGCAAATGATGGAACTCAAGCATCTTCTGATTACAAATTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CCA 90 bp TTTAAGATCCAAGGCATTTCTTTAGCTACTAATATACTCCGGAATGTTCCTTTCAGTTCAAGACTAGCCTaGCCAACATGGCGACACCAC +
Preference number: 4 (lower is better)
Translates to: FKIQGISLATNILRNVPFSSRLA*PTWRHH
Trigger: GTGGTGTCGCCATGTTGGCCAGGCTAGTCTTGAACT...GAAAGGAACATTCCGGAGTATATTAGTAGCTAAAGAAATGCCTTGGATCTTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR CAA 72 bp CGCAGGGTTAAGTATGATGCAGAGGTTAAAGTCTGTTaGAACAAAAACAAATGCCCGGGGAAATTTCATAGC +
Preference number: 4 (lower is better)
Translates to: RRVKYDAEVKVC*NKNKCPGKFHS
Trigger: GCTATGAAATTTCCCCGGGCATTTGTTTTTGTTCAAACAGACTTTAACCTCTGCATCATACTTAACCCTGCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR CAA 72 bp CTTTTAAGCCTCCAATGTTGCCACGAAGTATTCTTCTaGCATGAGGTGTCACGTACAAATACATCATTGACC +
Preference number: 4 (lower is better)
Translates to: LLSLQCCHEVFF*HEVSRTNTSLT
Trigger: GGTCAATGATGTATTTGTACGTGACACCTCATGCAAGAAGAATACTTCGTGGCAACATTGGAGGCTTAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR CAA 72 bp GTTGAAATTTGCGTTTCGGTAAAAATGACCTTCTACTaGGCTAGCACGCCAATAACTGGAATCTTGAAGCAG +
Preference number: 4 (lower is better)
Translates to: VEICVSVKMTFY*ASTPITGILKQ
Trigger: CTGCTTCAAGATTCCAGTTATTGGCGTGCTAGCCAAGTAGAAGGTCATTTTTACCGAAACGCAAATTTCAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR TCA 90 bp AATAAAAGTGAGTGGAATTTGCACTTGCATTGTCATTTTCCTGCAAGAATGGAACAAGAACACACAGCTTaGGTCTGCTGTTGCACAGTC +
Preference number: 4 (lower is better)
Translates to: NKSEWNLHLHCHFPARMEQEHTA*VCCCTV
Trigger: GACTGTGCAACAGCAGACTCAAGCTGTGTGTTCTTG...TTCCATTCTTGCAGGAAAATGACAATGCAAGTGCAAATTCCACTCACTTTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR TCA 90 bp GTGTGCCAGGAAAACTACTACAAAGAATCAACGGATGTAGTGAAATCTGCATCACCAGTTTCTGTTACATaGGACAGCAGTTGCCATTTT +
Preference number: 4 (lower is better)
Translates to: VCQENYYKESTDVVKSASPVSVT*DSSCHF
Trigger: AAAATGGCAACTGCTGTCTCATGTAACAGAAACTGG...TGATGCAGATTTCACTACATCCGTTGATTCTTTGTAGTAGTTTTCCTGGCACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR TCA 90 bp AAATGTGTTAACTGTCTGATTCCACCTATTATGGAGAGCACTTGTTTGTTCAGCCACTGCAAACTTATCTaGAGTGCACTTCCCAAGTGT +
Preference number: 4 (lower is better)
Translates to: KCVNCLIPPIMESTCLFSHCKLI*SALPKC
Trigger: ACACTTGGGAAGTGCACTTCAGATAAGTTTGCAGTG...GCTGAACAAACAAGTGCTCTCCATAATAGGTGGAATCAGACAGTTAACACATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR TCA 90 bp GTGTGCCAGGAAAACTACTACAAAGAATCAACGGATGTAGTGAAATCTGCATCAAATAAAATCACCCTGTaGGCTCTTCCTCAGGAATCA +
Preference number: 4 (lower is better)
Translates to: VCQENYYKESTDVVKSASNKITL*ALPQES
Trigger: TGATTCCTGAGGAAGAGCTCACAGGGTGATTTTATT...TGATGCAGATTTCACTACATCCGTTGATTCTTTGTAGTAGTTTTCCTGGCACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR TCA 90 bp TGTTGTTCAGATATCAAATACCATATGCCAATTCAGGTATTTGGCACATGGGTCCCCTTAGAGGTCATCTaGATAAAATCACCCTGTGAG +
Preference number: 4 (lower is better)
Translates to: CCSDIKYHMPIQVFGTWVPLEVI*IKSPCE
Trigger: CTCACAGGGTGATTTTATTCAGATGACCTCTAAGGG...GACCCATGTGCCAAATACCTGAATTGGCATATGGTATTTGATATCTGAACAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR TCA 90 bp ATTCACTTCCTCAGCTTGTGTCCCCAGAAAAGCACCATGTTTCCATACACTAAAGTAAGTGGAACCTTCTaGTCCTCTTGTCTTTGTAAA +
Preference number: 4 (lower is better)
Translates to: IHFLSLCPQKSTMFPYTKVSGTF*SSCLCK
Trigger: TTTACAAAGACAAGAGGATCAGAAGGTTCCACTTAC...TTTAGTGTATGGAAACATGGTGCTTTTCTGGGGACACAAGCTGAGGAAGTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR TCA 90 bp CCAATAAAAGTGAGTGGAATTTGCACTTGCATTGTCATTTTCCTGCAAGAATGGATCAGTGATTGTTTCTaGGCTTGGGAAAGGAGTCGT +
Preference number: 4 (lower is better)
Translates to: PIKVSGICTCIVIFLQEWISDCF*AWERSR
Trigger: ACGACTCCTTTCCCAAGCTCAGAAACAATCACTGAT...CCATTCTTGCAGGAAAATGACAATGCAAGTGCAAATTCCACTCACTTTTATTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR GCA 90 bp TGTTGTTCAGATATCAAATACCATATGCCAATTCAGGTATTTGGCACATGGGTCAAGGAAGGTCTGACTTaGTTCCTAATCATCAGCCGA +
Preference number: 4 (lower is better)
Translates to: CCSDIKYHMPIQVFGTWVKEGLT*FLIISR
Trigger: TCGGCTGATGATTAGGAAGCAAGTCAGACCTTCCTT...GACCCATGTGCCAAATACCTGAATTGGCATATGGTATTTGATATCTGAACAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR GCA 90 bp AATAAAAGTGAGTGGAATTTGCACTTGCATTGTCATTTTCCTGCAAGAATGGAATGGGAAAGGAGTCGTTaGCTATTTGGATCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: NKSEWNLHLHCHFPARMEWERSR*LFGSSA
Trigger: GGCAGAGGATCCAAATAGGCAACGACTCCTTTCCCA...TTCCATTCTTGCAGGAAAATGACAATGCAAGTGCAAATTCCACTCACTTTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CCA 90 bp AAATGTGTTAACTGTCTGATTCCACCTATTATGGAGAGCACTTGTTTGTTCAGCGTGACTTCAAAATACTaGGAACAGAGCCAGGCTTTG +
Preference number: 4 (lower is better)
Translates to: KCVNCLIPPIMESTCLFSVTSKY*EQSQAL
Trigger: CAAAGCCTGGCTCTGTTCCCAGTATTTTGAAGTCAC...GCTGAACAAACAAGTGCTCTCCATAATAGGTGGAATCAGACAGTTAACACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CCA 90 bp GTAATTTGTAATCAGAAGATGCTTGAGTTCCATCATTTGCATTACCTACCTGTGGTCGGGCAATATAAATaGACACCTCGTCTGAACCTC +
Preference number: 4 (lower is better)
Translates to: VICNQKMLEFHHLHYLPVVGQYK*TPRLNL
Trigger: GAGGTTCAGACGAGGTGTCCATTTATATTGCCCGAC...CACAGGTAGGTAATGCAAATGATGGAACTCAAGCATCTTCTGATTACAAATTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CCA 90 bp AAATGTGTTAACTGTCTGATTCCACCTATTATGGAGAGCACTTGTTTGTTCAGCCACACCCATTCACTGTaGTTACACAGACAGAAGCAA +
Preference number: 4 (lower is better)
Translates to: KCVNCLIPPIMESTCLFSHTHSL*LHRQKQ
Trigger: TTGCTTCTGTCTGTGTAACCACAGTGAATGGGTGTG...GCTGAACAAACAAGTGCTCTCCATAATAGGTGGAATCAGACAGTTAACACATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CCA 90 bp GTGTGCCAGGAAAACTACTACAAAGAATCAACGGATGTAGTGAAATCTGCATCATTTGGCACATGGGTCTaGCATCCAATTGCTTATTTC +
Preference number: 4 (lower is better)
Translates to: VCQENYYKESTDVVKSASFGTWV*HPIAYF
Trigger: GAAATAAGCAATTGGATGCCAGACCCATGTGCCAAA...TGATGCAGATTTCACTACATCCGTTGATTCTTTGTAGTAGTTTTCCTGGCACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR TCA 90 bp TGTTGTTCAGATATCAAATACCATATGCCAATTCAGGTATTTGGCACATGGGTCCAAAGGAGCAGGGGCTaGACTTATTTGTTCAAAATG +
Preference number: 4 (lower is better)
Translates to: CCSDIKYHMPIQVFGTWVQRSRG*TYLFKM
Trigger: CATTTTGAACAAATAAGTTCAGCCCCTGCTCCTTTG...GACCCATGTGCCAAATACCTGAATTGGCATATGGTATTTGATATCTGAACAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR TCA 90 bp AAATGTGTTAACTGTCTGATTCCACCTATTATGGAGAGCACTTGTTTGTTCAGCTCACTTACTGCCTTGTaGGAGAGGGGAAAAATACTA +
Preference number: 4 (lower is better)
Translates to: KCVNCLIPPIMESTCLFSSLTAL*ERGKIL
Trigger: TAGTATTTTTCCCCTCTCTCACAAGGCAGTAAGTGA...GCTGAACAAACAAGTGCTCTCCATAATAGGTGGAATCAGACAGTTAACACATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR TCA 90 bp CCAATAAAAGTGAGTGGAATTTGCACTTGCATTGTCATTTTCCTGCAAGAATGGGAAATTCAGAAACTCTaGACAACTTCCAGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: PIKVSGICTCIVIFLQEWEIQKL*TTSRSS
Trigger: ACTGCTCCTGGAAGTTGTTCAGAGTTTCTGAATTTC...CCATTCTTGCAGGAAAATGACAATGCAAGTGCAAATTCCACTCACTTTTATTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR GCA 90 bp TGTTGTTCAGATATCAAATACCATATGCCAATTCAGGTATTTGGCACATGGGTCGAAAAACAAGAGAGATaGCAGAGACAGTCGCCATTT +
Preference number: 4 (lower is better)
Translates to: CCSDIKYHMPIQVFGTWVEKQER*QRQSPF
Trigger: AAATGGCGACTGTCTCTGGCATCTCTCTTGTTTTTC...GACCCATGTGCCAAATACCTGAATTGGCATATGGTATTTGATATCTGAACAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR GCA 90 bp TGTTGTTCAGATATCAAATACCATATGCCAATTCAGGTATTTGGCACATGGGTCACAACTTTCACTTACTaGCTTGTGAGAGAGGGGAAA +
Preference number: 4 (lower is better)
Translates to: CCSDIKYHMPIQVFGTWVTTFTY*LVREGK
Trigger: TTTCCCCTCTCTCACAAGGCAGTAAGTGAAAGTTGT...GACCCATGTGCCAAATACCTGAATTGGCATATGGTATTTGATATCTGAACAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR GCA 90 bp GTGTGCCAGGAAAACTACTACAAAGAATCAACGGATGTAGTGAAATCTGCATCATTAAGCCTCCAATGTTaGCACGAAGTATTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: VCQENYYKESTDVVKSASLSLQC*HEVFFL
Trigger: CAAGAAGAATACTTCGTGGCAACATTGGAGGCTTAA...TGATGCAGATTTCACTACATCCGTTGATTCTTTGTAGTAGTTTTCCTGGCACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CCA 90 bp CCAATAAAAGTGAGTGGAATTTGCACTTGCATTGTCATTTTCCTGCAAGAATGGCTTCAACATGTCCAGTaGAAATATTGCGGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: PIKVSGICTCIVIFLQEWLQHVQ*KYCGKV
Trigger: CACTTTCCCGCAATATTTCCACTGGACATGTTGAAG...CCATTCTTGCAGGAAAATGACAATGCAAGTGCAAATTCCACTCACTTTTATTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR TCA 90 bp CCAATAAAAGTGAGTGGAATTTGCACTTGCATTGTCATTTTCCTGCAAGAATGGTCCTCTAATAGAAGCTaGCAGGACATAAAGACAGAA +
Preference number: 4 (lower is better)
Translates to: PIKVSGICTCIVIFLQEWSSNRS*QDIKTE
Trigger: TTCTGTCTTTATGTCCTGTCAGCTTCTATTAGAGGA...CCATTCTTGCAGGAAAATGACAATGCAAGTGCAAATTCCACTCACTTTTATTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR TCA 90 bp GTGTGCCAGGAAAACTACTACAAAGAATCAACGGATGTAGTGAAATCTGCATCATTAATGGAGATATTTTaGGAGTCTGTTTCCCTTGTC +
Preference number: 4 (lower is better)
Translates to: VCQENYYKESTDVVKSASLMEIF*ESVSLV
Trigger: GACAAGGGAAACAGACTCTCAAAATATCTCCATTAA...TGATGCAGATTTCACTACATCCGTTGATTCTTTGTAGTAGTTTTCCTGGCACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR GCA 90 bp GTGTGCCAGGAAAACTACTACAAAGAATCAACGGATGTAGTGAAATCTGCATCAGGTGTCACCACAATATaGATTGACTTAAAGGGTTTA +
Preference number: 4 (lower is better)
Translates to: VCQENYYKESTDVVKSASGVTTI*IDLKGL
Trigger: TAAACCCTTTAAGTCAATGCATATTGTGGTGACACC...TGATGCAGATTTCACTACATCCGTTGATTCTTTGTAGTAGTTTTCCTGGCACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR GCA 90 bp CCAATAAAAGTGAGTGGAATTTGCACTTGCATTGTCATTTTCCTGCAAGAATGGGCATTGTCATTTTCCTaGAAGAATGGAAACGCCTAT +
Preference number: 4 (lower is better)
Translates to: PIKVSGICTCIVIFLQEWALSFS*KNGNAY
Trigger: ATAGGCGTTTCCATTCTTGCAGGAAAATGACAATGC...CCATTCTTGCAGGAAAATGACAATGCAAGTGCAAATTCCACTCACTTTTATTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR GCA 90 bp AATAAAAGTGAGTGGAATTTGCACTTGCATTGTCATTTTCCTGCAAGAATGGAACAGAAGAAGCTGCTTTaGTTCAACATGTCCAGTGGA +
Preference number: 4 (lower is better)
Translates to: NKSEWNLHLHCHFPARMEQKKLL*FNMSSG
Trigger: TCCACTGGACATGTTGAAGCAAAGCAGCTTCTTCTG...TTCCATTCTTGCAGGAAAATGACAATGCAAGTGCAAATTCCACTCACTTTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR GCA 90 bp GTGTGCCAGGAAAACTACTACAAAGAATCAACGGATGTAGTGAAATCTGCATCAGGAAGATGGAGATTCTaGCTGTTTCAAAATTGTGAT +
Preference number: 4 (lower is better)
Translates to: VCQENYYKESTDVVKSASGRWRF*LFQNCD
Trigger: ATCACAATTTTGAAACAGGCAGAATCTCCATCTTCC...TGATGCAGATTTCACTACATCCGTTGATTCTTTGTAGTAGTTTTCCTGGCACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR GCA 90 bp TGTTGTTCAGATATCAAATACCATATGCCAATTCAGGTATTTGGCACATGGGTCTGCCCTAAGATCCTGTaGCTTTTCTCCACATTAAAA +
Preference number: 4 (lower is better)
Translates to: CCSDIKYHMPIQVFGTWVCPKIL*LFSTLK
Trigger: TTTTAATGTGGAGAAAAGGCACAGGATCTTAGGGCA...GACCCATGTGCCAAATACCTGAATTGGCATATGGTATTTGATATCTGAACAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR GCA 90 bp GTGTGCCAGGAAAACTACTACAAAGAATCAACGGATGTAGTGAAATCTGCATCAGTATTCATAGATCAATaGTCATTACCTGGTCTTCAC +
Preference number: 4 (lower is better)
Translates to: VCQENYYKESTDVVKSASVFIDQ*SLPGLH
Trigger: GTGAAGACCAGGTAATGAGCATTGATCTATGAATAC...TGATGCAGATTTCACTACATCCGTTGATTCTTTGTAGTAGTTTTCCTGGCACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CCA 90 bp CCAATAAAAGTGAGTGGAATTTGCACTTGCATTGTCATTTTCCTGCAAGAATGGTATTCCACCATTGGTTaGGATACCAAAGTGCTCATT +
Preference number: 4 (lower is better)
Translates to: PIKVSGICTCIVIFLQEWYSTIG*DTKVLI
Trigger: AATGAGCACTTTGGTATCCCAACCAATGGTGGAATA...CCATTCTTGCAGGAAAATGACAATGCAAGTGCAAATTCCACTCACTTTTATTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CCA 90 bp ATTCACTTCCTCAGCTTGTGTCCCCAGAAAAGCACCATGTTTCCATACACTAAAAATCATGCTTCAGACTaGTTAACGTTTTTGATGTTG +
Preference number: 4 (lower is better)
Translates to: IHFLSLCPQKSTMFPYTKNHASD*LTFLML
Trigger: CAACATCAAAAACGTTAACCAGTCTGAAGCATGATT...TTTAGTGTATGGAAACATGGTGCTTTTCTGGGGACACAAGCTGAGGAAGTGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CCA 90 bp GTGTGCCAGGAAAACTACTACAAAGAATCAACGGATGTAGTGAAATCTGCATCATTAAAGCTTGGAAGATaGAGATTCTGCCTGTTTCAA +
Preference number: 4 (lower is better)
Translates to: VCQENYYKESTDVVKSASLKLGR*RFCLFQ
Trigger: TTGAAACAGGCAGAATCTCCATCTTCCAAGCTTTAA...TGATGCAGATTTCACTACATCCGTTGATTCTTTGTAGTAGTTTTCCTGGCACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR CAA 72 bp AGAAGCTGCTTTGCTTCAACATGTCCAGTGGAAATATaGCGGGAAAGTGGTTACACACTTACACTAATAAAT +
Preference number: 4 (lower is better)
Translates to: RSCFASTCPVEI*RESGYTLTLIN
Trigger: ATTTATTAGTGTAAGTGTGTAACCACTTTCCCGCAATATTTCCACTGGACATGTTGAAGCAAAGCAGCTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR CAA 72 bp ACCACTTCAATTTGTGTAGATGCCTTTAACTTTTGCTaGTCAGTAGTAGCCTTTTGGGAGTGGAAATCGAAA +
Preference number: 4 (lower is better)
Translates to: TTSICVDAFNFC*SVVAFWEWKSK
Trigger: TTTCGATTTCCACTCCCAAAAGGCTACTACTGACAAGCAAAAGTTAAAGGCATCTACACAAATTGAAGTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR TCA 90 bp AATAAAAGTGAGTGGAATTTGCACTTGCATTGTCATTTTCCTGCAAGAATGGAAATTTTTCTTCTCTCCTaGCGTCACAGCATTCTGGTT +
Preference number: 4 (lower is better)
Translates to: NKSEWNLHLHCHFPARMEIFLLS*RHSILV
Trigger: AACCAGAATGCTGTGACGTCAGGAGAGAAGAAAAAT...TTCCATTCTTGCAGGAAAATGACAATGCAAGTGCAAATTCCACTCACTTTTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR TCA 90 bp AAATGTGTTAACTGTCTGATTCCACCTATTATGGAGAGCACTTGTTTGTTCAGCAACTCTTCCTTCCACTaGTTCTACTGTAAACTCATA +
Preference number: 4 (lower is better)
Translates to: KCVNCLIPPIMESTCLFSNSSFH*FYCKLI
Trigger: TATGAGTTTACAGTAGAATCAGTGGAAGGAAGAGTT...GCTGAACAAACAAGTGCTCTCCATAATAGGTGGAATCAGACAGTTAACACATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR TCA 90 bp TGTTGTTCAGATATCAAATACCATATGCCAATTCAGGTATTTGGCACATGGGTCGTAAATTTATTTCACTaGTCCTTCTCGCCACTGATT +
Preference number: 4 (lower is better)
Translates to: CCSDIKYHMPIQVFGTWVVNLFH*SFSPLI
Trigger: AATCAGTGGCGAGAAGGATCAGTGAAATAAATTTAC...GACCCATGTGCCAAATACCTGAATTGGCATATGGTATTTGATATCTGAACAACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR GCA 90 bp AAATGTGTTAACTGTCTGATTCCACCTATTATGGAGAGCACTTGTTTGTTCAGCTTGAACAAAAACAAATaGCCGGGGAAATTTCATAGC +
Preference number: 4 (lower is better)
Translates to: KCVNCLIPPIMESTCLFSLNKNK*PGKFHS
Trigger: GCTATGAAATTTCCCCGGGCATTTGTTTTTGTTCAA...GCTGAACAAACAAGTGCTCTCCATAATAGGTGGAATCAGACAGTTAACACATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR GCA 90 bp GTAATTTGTAATCAGAAGATGCTTGAGTTCCATCATTTGCATTACCTACCTGTGACGAAGTATTCTTCTTaGATGAGGTGTCACGTACAA +
Preference number: 4 (lower is better)
Translates to: VICNQKMLEFHHLHYLPVTKYSS*MRCHVQ
Trigger: TTGTACGTGACACCTCATGCAAGAAGAATACTTCGT...CACAGGTAGGTAATGCAAATGATGGAACTCAAGCATCTTCTGATTACAAATTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR GCA 90 bp TTTAAGATCCAAGGCATTTCTTTAGCTACTAATATACTCCGGAATGTTCCTTTCTCGCCACTGATTCTATaGAACTCTCACCTACCTAAA +
Preference number: 4 (lower is better)
Translates to: FKIQGISLATNILRNVPFSPLIL*NSHLPK
Trigger: TTTAGGTAGGTGAGAGTTGCATAGAATCAGTGGCGA...GAAAGGAACATTCCGGAGTATATTAGTAGCTAAAGAAATGCCTTGGATCTTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CCA 90 bp AATAAAAGTGAGTGGAATTTGCACTTGCATTGTCATTTTCCTGCAAGAATGGAACCATCCTCTGTAGAGTaGGAAACAATAATGGAGAGA +
Preference number: 4 (lower is better)
Translates to: NKSEWNLHLHCHFPARMEPSSVE*ETIMER
Trigger: TCTCTCCATTATTGTTTCCCACTCTACAGAGGATGG...TTCCATTCTTGCAGGAAAATGACAATGCAAGTGCAAATTCCACTCACTTTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CCA 90 bp AAATGTGTTAACTGTCTGATTCCACCTATTATGGAGAGCACTTGTTTGTTCAGCTCTCTACGGTCCCTTTaGATGGGTTATTTGATTTTT +
Preference number: 4 (lower is better)
Translates to: KCVNCLIPPIMESTCLFSSLRSL*MGYLIF
Trigger: AAAAATCAAATAACCCATCCAAAGGGACCGTAGAGA...GCTGAACAAACAAGTGCTCTCCATAATAGGTGGAATCAGACAGTTAACACATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CCA 90 bp GTGTGCCAGGAAAACTACTACAAAGAATCAACGGATGTAGTGAAATCTGCATCAAATATTGCGGGAAAGTaGTTACACACTTACACTAAT +
Preference number: 4 (lower is better)
Translates to: VCQENYYKESTDVVKSASNIAGK*LHTYTN
Trigger: ATTAGTGTAAGTGTGTAACCACTTTCCCGCAATATT...TGATGCAGATTTCACTACATCCGTTGATTCTTTGTAGTAGTTTTCCTGGCACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CCA 90 bp TGTTGTTCAGATATCAAATACCATATGCCAATTCAGGTATTTGGCACATGGGTCAACATTGTTAAAGCTTaGAAGATGGAGATTCTGCCT +
Preference number: 4 (lower is better)
Translates to: CCSDIKYHMPIQVFGTWVNIVKA*KMEILP
Trigger: AGGCAGAATCTCCATCTTCCAAGCTTTAACAATGTT...GACCCATGTGCCAAATACCTGAATTGGCATATGGTATTTGATATCTGAACAACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CCA 90 bp CCAATAAAAGTGAGTGGAATTTGCACTTGCATTGTCATTTTCCTGCAAGAATGGTCAGTAGTAGCCTTTTaGGAGTGGAAATCGAAAATA +
Preference number: 4 (lower is better)
Translates to: PIKVSGICTCIVIFLQEWSVVAF*EWKSKI
Trigger: TATTTTCGATTTCCACTCCCAAAAGGCTACTACTGA...CCATTCTTGCAGGAAAATGACAATGCAAGTGCAAATTCCACTCACTTTTATTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR CAA 72 bp TATTGTCATACCAATAAAAGTGAGTGGAATTTGCACTaGCATTGTCATTTTCCTGCAAGAATGGAAACGCCT +
Preference number: 4 (lower is better)
Translates to: YCHTNKSEWNLH*HCHFPARMETP
Trigger: AGGCGTTTCCATTCTTGCAGGAAAATGACAATGCAAGTGCAAATTCCACTCACTTTTATTGGTATGACAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR TCA 90 bp TTTAAGATCCAAGGCATTTCTTTAGCTACTAATATACTCCGGAATGTTCCTTTCAGTATTCTTCTTGCATaGGGTGTCACGTACAAATAC +
Preference number: 4 (lower is better)
Translates to: FKIQGISLATNILRNVPFSILLA*GVTYKY
Trigger: GTATTTGTACGTGACACCTCATGCAAGAAGAATACT...GAAAGGAACATTCCGGAGTATATTAGTAGCTAAAGAAATGCCTTGGATCTTAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR GCA 90 bp TGTTGTTCAGATATCAAATACCATATGCCAATTCAGGTATTTGGCACATGGGTCTTTCAAAACAAAATATaGATACTGTACGCATGTCGC +
Preference number: 4 (lower is better)
Translates to: CCSDIKYHMPIQVFGTWVFQNKI*ILYACR
Trigger: GCGACATGCGTACAGTATGCATATTTTGTTTTGAAA...GACCCATGTGCCAAATACCTGAATTGGCATATGGTATTTGATATCTGAACAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR GCA 90 bp CCAATAAAAGTGAGTGGAATTTGCACTTGCATTGTCATTTTCCTGCAAGAATGGATTTACAATGAAGACTaGAGTGTTTCTCCCAACTTT +
Preference number: 4 (lower is better)
Translates to: PIKVSGICTCIVIFLQEWIYNED*SVSPNF
Trigger: AAAGTTGGGAGAAACACTGCAGTCTTCATTGTAAAT...CCATTCTTGCAGGAAAATGACAATGCAAGTGCAAATTCCACTCACTTTTATTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR GCA 90 bp AATAAAAGTGAGTGGAATTTGCACTTGCATTGTCATTTTCCTGCAAGAATGGAATTGAGTTCCATCATTTaGATTACCTACCTGTGTGAC +
Preference number: 4 (lower is better)
Translates to: NKSEWNLHLHCHFPARMELSSII*ITYLCD
Trigger: GTCACACAGGTAGGTAATGCAAATGATGGAACTCAA...TTCCATTCTTGCAGGAAAATGACAATGCAAGTGCAAATTCCACTCACTTTTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CCA 90 bp GTAATTTGTAATCAGAAGATGCTTGAGTTCCATCATTTGCATTACCTACCTGTGCATTTTGCAGTGAAATaGTCAGTAGAAAATGGCCAT +
Preference number: 4 (lower is better)
Translates to: VICNQKMLEFHHLHYLPVHFAVK*SVENGH
Trigger: ATGGCCATTTTCTACTGACCATTTCACTGCAAAATG...CACAGGTAGGTAATGCAAATGATGGAACTCAAGCATCTTCTGATTACAAATTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR TCA 90 bp TTTAAGATCCAAGGCATTTCTTTAGCTACTAATATACTCCGGAATGTTCCTTTCAATGTGTTAACTGTCTaGTTCCACCTATTATGGAGA +
Preference number: 4 (lower is better)
Translates to: FKIQGISLATNILRNVPFNVLTV*FHLLWR
Trigger: TCTCCATAATAGGTGGAATCAGACAGTTAACACATT...GAAAGGAACATTCCGGAGTATATTAGTAGCTAAAGAAATGCCTTGGATCTTAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR GCA 90 bp AATAAAAGTGAGTGGAATTTGCACTTGCATTGTCATTTTCCTGCAAGAATGGAAACAATGGCCAAAATGTaGTCCTATATTACTGCAACA +
Preference number: 4 (lower is better)
Translates to: NKSEWNLHLHCHFPARMETMAKM*SYITAT
Trigger: TGTTGCAGTAATATAGGAGCACATTTTGGCCATTGT...TTCCATTCTTGCAGGAAAATGACAATGCAAGTGCAAATTCCACTCACTTTTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR GCA 90 bp TTTAAGATCCAAGGCATTTCTTTAGCTACTAATATACTCCGGAATGTTCCTTTCGATGCCTTTAACTTTTaGTTGTCAGTAGTAGCCTTT +
Preference number: 4 (lower is better)
Translates to: FKIQGISLATNILRNVPFDAFNF*LSVVAF
Trigger: AAAGGCTACTACTGACAAGCAAAAGTTAAAGGCATC...GAAAGGAACATTCCGGAGTATATTAGTAGCTAAAGAAATGCCTTGGATCTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CCA 90 bp AATAAAAGTGAGTGGAATTTGCACTTGCATTGTCATTTTCCTGCAAGAATGGAAGTCAATAAAAAGCTGTaGTTGTGTCCTTGTTTGGAT +
Preference number: 4 (lower is better)
Translates to: NKSEWNLHLHCHFPARMEVNKKL*LCPCLD
Trigger: ATCCAAACAAGGACACAACCACAGCTTTTTATTGAC...TTCCATTCTTGCAGGAAAATGACAATGCAAGTGCAAATTCCACTCACTTTTATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CCA 90 bp TTTAAGATCCAAGGCATTTCTTTAGCTACTAATATACTCCGGAATGTTCCTTTCTTTCCACCTTTTGGTTaGCATTATCTCCAAACAAAC +
Preference number: 4 (lower is better)
Translates to: FKIQGISLATNILRNVPFFPPFG*HYLQTN
Trigger: GTTTGTTTGGAGATAATGCCAACCAAAAGGTGGAAA...GAAAGGAACATTCCGGAGTATATTAGTAGCTAAAGAAATGCCTTGGATCTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
3UTR CAA 72 bp ATGGTATACATGTGCTGTTATGGACTACATAATGTTTaGGTTGAAGTTTTATTTGCAAGCGATGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: MVYMCCYGLHNV*VEVLFASDVCV
Trigger: CACACACACATCGCTTGCAAATAAAACTTCAACCAAAACATTATGTAGTCCATAACAGCACATGTATACCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR GCA 90 bp TTTAAGATCCAAGGCATTTCTTTAGCTACTAATATACTCCGGAATGTTCCTTTCGTGCTCCTATATTACTaGAACAGAACAAAAATCACA +
Preference number: 4 (lower is better)
Translates to: FKIQGISLATNILRNVPFVLLYY*NRTKIT
Trigger: TGTGATTTTTGTTCTGTTGCAGTAATATAGGAGCAC...GAAAGGAACATTCCGGAGTATATTAGTAGCTAAAGAAATGCCTTGGATCTTAAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS GCA 90 bp CGGAGAGGAGTCTGTGTGCCTGGGCGGCGGGCGAGGACTCCCCCATaGTCGCCAGGAGCGCGGGCCAGGAGGGCTCCTGCTGCCGCCGCT +
Preference number: 5 (lower is better)
Translates to: RRGVCVPGRRARTPP*SPGARARRAPAAAA
Trigger: AGCGGCGGCAGCAGGAGCCCTCCTGGCCCGCGCTCCTGGCGAGCATGGGGGAGTCCTCGCCCGCCGCCCAGGCACACAGACTCCTCTCCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS GCA 90 bp GCCAGGAGCGCGGGCCAGGAGGGCTCCTGCTGCCGCCGCTGCTGCTaGTGCTGCTGCCGCTGCCTCTGCTGCTGCTGCTGCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: ARSAGQEGSCCRRCC*CCCRCLCCCCCCCC
Trigger: GCAGCAGCAGCAGCAGCAGCAGCAGAGGCAGCGGCAGCAGCAGCAGCAGCAGCGGCGGCAGCAGGAGCCCTCCTGGCCCGCGCTCCTGGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS GCA 90 bp CTCGCCAGGAGCGCGGGCCAGGAGGGCTCCTGCTGCCGCCGCTGCTaGTGCTGCTGCTGCCGCTGCCTCTGCTGCTGCTGCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: LARSAGQEGSCCRRC*CCCCRCLCCCCCCC
Trigger: GCAGCAGCAGCAGCAGCAGCAGAGGCAGCGGCAGCAGCAGCAGCAGCAGCGGCGGCAGCAGGAGCCCTCCTGGCCCGCGCTCCTGGCGAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS GCA 90 bp GACTCCCCCATGCTCGCCAGGAGCGCGGGCCAGGAGGGCTCCTGCTaGCGCCGCTGCTGCTGCTGCTGCTGCCGCTGCCTCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: DSPMLARSAGQEGSC*RRCCCCCCRCLCCC
Trigger: GCAGCAGCAGAGGCAGCGGCAGCAGCAGCAGCAGCAGCGGCGGCAGCAGGAGCCCTCCTGGCCCGCGCTCCTGGCGAGCATGGGGGAGTC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS GCA 90 bp GAGGACTCCCCCATGCTCGCCAGGAGCGCGGGCCAGGAGGGCTCCTaGTGCCGCCGCTGCTGCTGCTGCTGCTGCCGCTGCCTCTGCTGC +
Preference number: 5 (lower is better)
Translates to: EDSPMLARSAGQEGS*CRRCCCCCCRCLCC
Trigger: GCAGCAGAGGCAGCGGCAGCAGCAGCAGCAGCAGCGGCGGCAGCAGGAGCCCTCCTGGCCCGCGCTCCTGGCGAGCATGGGGGAGTCCTC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS GCA 90 bp AGGAGCGCGGGCCAGGAGGGCTCCTGCTGCCGCCGCTGCTGCTGCTaGTGCTGCCGCTGCCTCTGCTGCTGCTGCTGCTGCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: RSAGQEGSCCRRCCC*CCRCLCCCCCCCCC
Trigger: GCAGCAGCAGCAGCAGCAGCAGCAGCAGAGGCAGCGGCAGCAGCAGCAGCAGCAGCGGCGGCAGCAGGAGCCCTCCTGGCCCGCGCTCCT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS GCA 90 bp ATGCTCGCCAGGAGCGCGGGCCAGGAGGGCTCCTGCTGCCGCCGCTaGTGCTGCTGCTGCTGCCGCTGCCTCTGCTGCTGCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: MLARSAGQEGSCCRR*CCCCCRCLCCCCCC
Trigger: GCAGCAGCAGCAGCAGCAGAGGCAGCGGCAGCAGCAGCAGCAGCAGCGGCGGCAGCAGGAGCCCTCCTGGCCCGCGCTCCTGGCGAGCAT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS CCA 90 bp CCGACTGCTGACGCCGCCTCCCGCGGAGCTCCGGGCCGAATCGCCTaGGCTGGGCCTCCCGAGAGCCACAGTCATCTTCAGTCCGCGGGC +
Preference number: 5 (lower is better)
Translates to: PTADAASRGAPGRIA*AGPPESHSHLQSAG
Trigger: GCCCGCGGACTGAAGATGACTGTGGCTCTCGGGAGGCCCAGCCCAGGCGATTCGGCCCGGAGCTCCGCGGGAGGCGGCGTCAGCAGTCGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS GCA 90 bp TGCTGCTGCTGCCGCTGCCTCTGCTGCTGCTGCTGCTGCTGCTGCTaGCGCTGCTGCTGCTGGTGCTCCTTGTCCCGGGCCCGGGTCAGC +
Preference number: 5 (lower is better)
Translates to: CCCCRCLCCCCCCCC*RCCCWCSLSRARVS
Trigger: GCTGACCCGGGCCCGGGACAAGGAGCACCAGCAGCAGCAGCGGCAGCAGCAGCAGCAGCAGCAGCAGCAGAGGCAGCGGCAGCAGCAGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS GCA 90 bp GCTTGGCAGAGTTTCCTAGAAAAAGAGCCTTGCCCCGGTCGTCTTTaGCTCGGTTGCCCTTGCCGCCGCCGCCGCCGCCGTCTCCCGGGG +
Preference number: 5 (lower is better)
Translates to: AWQSFLEKEPCPGRL*LGCPCRRRRRRLPG
Trigger: CCCCGGGAGACGGCGGCGGCGGCGGCGGCAAGGGCAACCGAGGCAAAGACGACCGGGGCAAGGCTCTTTTTCTAGGAAACTCTGCCAAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS TCA 90 bp CCCGACTCCAGTTCCTGGCGCACACCGCGTCCGCATTCTCCACCGTaGAGCACTGGCCCGAGGACGCGCCCTGGGGGTAACAAGTCTCCA +
Preference number: 5 (lower is better)
Translates to: PDSSSWRTPRPHSPP*STGPRTRPGGNKSP
Trigger: TGGAGACTTGTTACCCCCAGGGCGCGTCCTCGGGCCAGTGCTTCACGGTGGAGAATGCGGACGCGGTGTGCGCCAGGAACTGGAGTCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS GCA 90 bp CCAGGCGCCACACGGGCTTGGCAGAGTTTCCTAGAAAAAGAGCCTTaGCCCGGTCGTCTTTGCCTCGGTTGCCCTTGCCGCCGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: PGATRAWQSFLEKEP*PGRLCLGCPCRRRR
Trigger: GCGGCGGCGGCGGCAAGGGCAACCGAGGCAAAGACGACCGGGGCAAGGCTCTTTTTCTAGGAAACTCTGCCAAGCCCGTGTGGCGCCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS GCA 90 bp TCCTTCCTTTCCTTCTCCTTCTTCTTCTCCTCCGCCTCCCGCTCCTaGTCCGCGCTGGCTCTCCCAGAGTCCGGAGCCTGGGCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: SFLSFSFFFSSASRS*SALALPESGAWAAS
Trigger: GGAGGCAGCCCAGGCTCCGGACTCTGGGAGAGCCAGCGCGGAGCAGGAGCGGGAGGCGGAGGAGAAGAAGAAGGAGAAGGAAAGGAAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS CCA 90 bp GGAAACAATAATGGAGAGAGAGAGAGAGAGAGAGACGGAGGAGGCTaGTGCTGGTGGCCGGCGGCGAGGCTGGGTGCAGGGGGCGATGGT +
Preference number: 5 (lower is better)
Translates to: GNNNGERERERDGGG*CWWPAARLGAGGDG
Trigger: ACCATCGCCCCCTGCACCCAGCCTCGCCGCCGGCCACCAGCACCAGCCTCCTCCGTCTCTCTCTCTCTCTCTCTCTCCATTATTGTTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CAA 90 bp GCAAGCGGATGTTGTTTGCTTAGGGGACGAGAAGAGGGCGAGGGAAAGGAAAGGCCGGTCACCCAGGCATaGTCAGCGCGCGGGTCCCCA +
Preference number: 5 (lower is better)
Translates to: ASGCCLLRGREEGEGKERPVTQA*SARGSP
Trigger: TGGGGACCCGCGCGCTGACAATGCCTGGGTGACCGG...CCTTTCCTTTCCCTCGCCCTCTTCTCGTCCCCTAAGCAAACAACATCCGCTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CAA 90 bp GCCCACCAAGCGTGCACACCCATTCACTGTGGTTACACAGACAGAAGCAAGCGGTTGCCCCGGTCGTCTTaGCCTCGGTTGCCCTTGCCG +
Preference number: 5 (lower is better)
Translates to: AHQACTPIHCGYTDRSKRLPRSS*PRLPLP
Trigger: CGGCAAGGGCAACCGAGGCAAAGACGACCGGGGCAA...CCGCTTGCTTCTGTCTGTGTAACCACAGTGAATGGGTGTGCACGCTTGGTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CAA 90 bp GCAAGCGGATGTTGTTTGCTTAGGGGACGAGAAGAGGGCGAGGGAAAGGAAAGGAAAGGGCTGGGCCACTaGGGGATGGGAACTGGAGCA +
Preference number: 5 (lower is better)
Translates to: ASGCCLLRGREEGEGKERKGLGH*GMGTGA
Trigger: TGCTCCAGTTCCCATCCCCAAGTGGCCCAGCCCTTT...CCTTTCCTTTCCCTCGCCCTCTTCTCGTCCCCTAAGCAAACAACATCCGCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CAA 90 bp GCAAGCGGATGTTGTTTGCTTAGGGGACGAGAAGAGGGCGAGGGAAAGGAAAGGAGCTACTCGAGAGGCTaGAGGCAGGAGAATCGCTTG +
Preference number: 5 (lower is better)
Translates to: ASGCCLLRGREEGEGKERSYSRG*RQENRL
Trigger: CAAGCGATTCTCCTGCCTCAAGCCTCTCGAGTAGCT...CCTTTCCTTTCCCTCGCCCTCTTCTCGTCCCCTAAGCAAACAACATCCGCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS TCA 90 bp GCTGCTGCTGTGGTGACACTCGTCCTTCCGTTACTCCTCATTGGTTaGGTTTTCTTCCAGCGTGTTGATGCCTCCAAAGCTCAGTCCGGC +
Preference number: 5 (lower is better)
Translates to: AAAVVTLVLPLLLIG*VFFQRVDASKAQSG
Trigger: GCCGGACTGAGCTTTGGAGGCATCAACACGCTGGAAGAAAACTCAACCAATGAGGAGTAACGGAAGGACGAGTGTCACCACAGCAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CAA 90 bp GCCCACCAAGCGTGCACACCCATTCACTGTGGTTACACAGACAGAAGCAAGCGGGAAGGAAGGTCTGACTaGCTTCCTAATCATCAGCCG +
Preference number: 5 (lower is better)
Translates to: AHQACTPIHCGYTDRSKREGRSD*LPNHQP
Trigger: CGGCTGATGATTAGGAAGCAAGTCAGACCTTCCTTC...CCGCTTGCTTCTGTCTGTGTAACCACAGTGAATGGGTGTGCACGCTTGGTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CAA 90 bp GCAAGCGGATGTTGTTTGCTTAGGGGACGAGAAGAGGGCGAGGGAAAGGAAAGGGCAAGCGGATGTTGTTaGCTTAGGGGACGAGAAGAG +
Preference number: 5 (lower is better)
Translates to: ASGCCLLRGREEGEGKERASGCC*LRGREE
Trigger: CTCTTCTCGTCCCCTAAGCAAACAACATCCGCTTGC...CCTTTCCTTTCCCTCGCCCTCTTCTCGTCCCCTAAGCAAACAACATCCGCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS TCA 90 bp AGACAGCAGTTGCCATTTTTCACGGCGGGCCAGCTGCTGCTGTGGTaGCACTCGTCCTTCCGTTACTCCTCATTGGTTGAGTTTTCTTCC +
Preference number: 5 (lower is better)
Translates to: RQQLPFFTAGQLLLW*HSSFRYSSLVEFSS
Trigger: GGAAGAAAACTCAACCAATGAGGAGTAACGGAAGGACGAGTGTCACCACAGCAGCAGCTGGCCCGCCGTGAAAAATGGCAACTGCTGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CAA 90 bp AAATGTGTTAACTGTCTGATTCCACCTATTATGGAGAGCACTTGTTTGTTCAGCCGGGCCCGGGTCAGCTaGGCCTCGGCGCAGAACCAC +
Preference number: 5 (lower is better)
Translates to: KCVNCLIPPIMESTCLFSRARVS*ASAQNH
Trigger: GTGGTTCTGCGCCGAGGCCAAGCTGACCCGGGCCCG...GCTGAACAAACAAGTGCTCTCCATAATAGGTGGAATCAGACAGTTAACACATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CAA 90 bp GCCCACCAAGCGTGCACACCCATTCACTGTGGTTACACAGACAGAAGCAAGCGGACAAGAACACACAGCTaGAGTCTGCTGTTGCACAGT +
Preference number: 5 (lower is better)
Translates to: AHQACTPIHCGYTDRSKRTRTHS*SLLLHS
Trigger: ACTGTGCAACAGCAGACTCAAGCTGTGTGTTCTTGT...CCGCTTGCTTCTGTCTGTGTAACCACAGTGAATGGGTGTGCACGCTTGGTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CAA 90 bp AAATGTGTTAACTGTCTGATTCCACCTATTATGGAGAGCACTTGTTTGTTCAGCTCGTCTTTGCCTCGGTaGCCCTTGCCGCCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: KCVNCLIPPIMESTCLFSSSLPR*PLPPPP
Trigger: CGGCGGCGGCGGCAAGGGCAACCGAGGCAAAGACGA...GCTGAACAAACAAGTGCTCTCCATAATAGGTGGAATCAGACAGTTAACACATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CAA 90 bp GCAAGCGGATGTTGTTTGCTTAGGGGACGAGAAGAGGGCGAGGGAAAGGAAAGGTGGTTGTGTCCTTGTTaGGATTCAGGCCCATCTGTT +
Preference number: 5 (lower is better)
Translates to: ASGCCLLRGREEGEGKERWLCPC*DSGPSV
Trigger: AACAGATGGGCCTGAATCCAAACAAGGACACAACCA...CCTTTCCTTTCCCTCGCCCTCTTCTCGTCCCCTAAGCAAACAACATCCGCTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CAA 90 bp GCCCACCAAGCGTGCACACCCATTCACTGTGGTTACACAGACAGAAGCAAGCGGGTATTCCACCATTGGTaGGGATACCAAAGTGCTCAT +
Preference number: 5 (lower is better)
Translates to: AHQACTPIHCGYTDRSKRVFHHW*GYQSAH
Trigger: ATGAGCACTTTGGTATCCCAACCAATGGTGGAATAC...CCGCTTGCTTCTGTCTGTGTAACCACAGTGAATGGGTGTGCACGCTTGGTGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CAA 90 bp GCAAGCGGATGTTGTTTGCTTAGGGGACGAGAAGAGGGCGAGGGAAAGGAAAGGTGTCCAGTGGAAATATaGCGGGAAAGTGGTTACACA +
Preference number: 5 (lower is better)
Translates to: ASGCCLLRGREEGEGKERCPVEI*RESGYT
Trigger: TGTGTAACCACTTTCCCGCAATATTTCCACTGGACA...CCTTTCCTTTCCCTCGCCCTCTTCTCGTCCCCTAAGCAAACAACATCCGCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CAA 90 bp GCAAGCGGATGTTGTTTGCTTAGGGGACGAGAAGAGGGCGAGGGAAAGGAAAGGCACGAAGTATTCTTCTaGCATGAGGTGTCACGTACA +
Preference number: 5 (lower is better)
Translates to: ASGCCLLRGREEGEGKERHEVFF*HEVSRT
Trigger: TGTACGTGACACCTCATGCAAGAAGAATACTTCGTG...CCTTTCCTTTCCCTCGCCCTCTTCTCGTCCCCTAAGCAAACAACATCCGCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CAA 90 bp TTTAAGATCCAAGGCATTTCTTTAGCTACTAATATACTCCGGAATGTTCCTTTCTGCTGCTGGTGCTCCTaGTCCCGGGCCCGGGTCAGC +
Preference number: 5 (lower is better)
Translates to: FKIQGISLATNILRNVPFCCWCS*SRARVS
Trigger: GCTGACCCGGGCCCGGGACAAGGAGCACCAGCAGCA...GAAAGGAACATTCCGGAGTATATTAGTAGCTAAAGAAATGCCTTGGATCTTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CAA 90 bp GCAAGCGGATGTTGTTTGCTTAGGGGACGAGAAGAGGGCGAGGGAAAGGAAAGGCCGCAATCCCTTTGTTaGTTCCCTGTAATTACAATG +
Preference number: 5 (lower is better)
Translates to: ASGCCLLRGREEGEGKERPQSLC*FPVITM
Trigger: CATTGTAATTACAGGGAACAAACAAAGGGATTGCGG...CCTTTCCTTTCCCTCGCCCTCTTCTCGTCCCCTAAGCAAACAACATCCGCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CAA 90 bp GCAAGCGGATGTTGTTTGCTTAGGGGACGAGAAGAGGGCGAGGGAAAGGAAAGGGCCTTTAACTTTTGCTaGTCAGTAGTAGCCTTTTGG +
Preference number: 5 (lower is better)
Translates to: ASGCCLLRGREEGEGKERAFNFC*SVVAFW
Trigger: CCAAAAGGCTACTACTGACAAGCAAAAGTTAAAGGC...CCTTTCCTTTCCCTCGCCCTCTTCTCGTCCCCTAAGCAAACAACATCCGCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS TCA 90 bp CTGTTGCACAGTCTTGTTGCTGATGACACTGTGAGCGATGTCCTGTaGCAGGAGCCACTTTTCTCTACGGTCCCTTTGGATGGGTTATTT +
Preference number: 5 (lower is better)
Translates to: LLHSLVADDTVSDVL*QEPLFSTVPLDGLF
Trigger: AAATAACCCATCCAAAGGGACCGTAGAGAAAAGTGGCTCCTGTCACAGGACATCGCTCACAGTGTCATCAGCAACAAGACTGTGCAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CAA 90 bp GCCCACCAAGCGTGCACACCCATTCACTGTGGTTACACAGACAGAAGCAAGCGGTGTATTGAAAATCTATaGATGGTCAGTCTGCTAGCT +
Preference number: 5 (lower is better)
Translates to: AHQACTPIHCGYTDRSKRCIENL*MVSLLA
Trigger: AGCTAGCAGACTGACCATCAATAGATTTTCAATACA...CCGCTTGCTTCTGTCTGTGTAACCACAGTGAATGGGTGTGCACGCTTGGTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CAA 90 bp ATTCACTTCCTCAGCTTGTGTCCCCAGAAAAGCACCATGTTTCCATACACTAAACTGCAGTTCAAAGTGTaGGGACTGGACAACCCCGAG +
Preference number: 5 (lower is better)
Translates to: IHFLSLCPQKSTMFPYTKLQFKV*GLDNPE
Trigger: CTCGGGGTTGTCCAGTCCCAACACTTTGAACTGCAG...TTTAGTGTATGGAAACATGGTGCTTTTCTGGGGACACAAGCTGAGGAAGTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CAA 90 bp GTGTGCCAGGAAAACTACTACAAAGAATCAACGGATGTAGTGAAATCTGCATCAGGAGTCGTTGCCTATTaGGATCCTCTGCCTGACCCC +
Preference number: 5 (lower is better)
Translates to: VCQENYYKESTDVVKSASGVVAY*DPLPDP
Trigger: GGGGTCAGGCAGAGGATCCAAATAGGCAACGACTCC...TGATGCAGATTTCACTACATCCGTTGATTCTTTGTAGTAGTTTTCCTGGCACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CAA 90 bp AATAAAAGTGAGTGGAATTTGCACTTGCATTGTCATTTTCCTGCAAGAATGGAAAGTCCGCGGGCTAAGTaGCCGCCATCTTCGTCCTGG +
Preference number: 5 (lower is better)
Translates to: NKSEWNLHLHCHFPARMESPRAK*PPSSSW
Trigger: CCAGGACGAAGATGGCGGCAACTTAGCCCGCGGACT...TTCCATTCTTGCAGGAAAATGACAATGCAAGTGCAAATTCCACTCACTTTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CAA 90 bp CCAATAAAAGTGAGTGGAATTTGCACTTGCATTGTCATTTTCCTGCAAGAATGGATCTCGCCGCCTTCCTaGAGCACCACATCCAGACTG +
Preference number: 5 (lower is better)
Translates to: PIKVSGICTCIVIFLQEWISPPS*STTSRL
Trigger: CAGTCTGGATGTGGTGCTCAAGGAAGGCGGCGAGAT...CCATTCTTGCAGGAAAATGACAATGCAAGTGCAAATTCCACTCACTTTTATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CAA 90 bp GTAATTTGTAATCAGAAGATGCTTGAGTTCCATCATTTGCATTACCTACCTGTGACCCCTGGTCATATTTaGGGAACGCACAGCCCTGGC +
Preference number: 5 (lower is better)
Translates to: VICNQKMLEFHHLHYLPVTPGHI*GTHSPG
Trigger: GCCAGGGCTGTGCGTTCCCAAAATATGACCAGGGGT...CACAGGTAGGTAATGCAAATGATGGAACTCAAGCATCTTCTGATTACAAATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CAA 90 bp TTTAAGATCCAAGGCATTTCTTTAGCTACTAATATACTCCGGAATGTTCCTTTCTCTTGTCAGGCCCCCTaGGCTCCGCTCTGTTTCTGG +
Preference number: 5 (lower is better)
Translates to: FKIQGISLATNILRNVPFSCQAP*APLCFW
Trigger: CCAGAAACAGAGCGGAGCCAAGGGGGCCTGACAAGA...GAAAGGAACATTCCGGAGTATATTAGTAGCTAAAGAAATGCCTTGGATCTTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CAA 90 bp TGTTGTTCAGATATCAAATACCATATGCCAATTCAGGTATTTGGCACATGGGTCGCTAAAAAGGAACTCTaGTCAGGCCCCCTTGGCTCC +
Preference number: 5 (lower is better)
Translates to: CCSDIKYHMPIQVFGTWVAKKEL*SGPLGS
Trigger: GGAGCCAAGGGGGCCTGACAAGAGTTCCTTTTTAGC...GACCCATGTGCCAAATACCTGAATTGGCATATGGTATTTGATATCTGAACAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS GCA 90 bp CTCTCTCTCTCCCTCTCCCTCTCTTTTATCTCTCTCTGTCTCTTTTaGCTACATAAATATTACCAGGCTTTGAAGGAAGGTCTGACTTGC +
Preference number: 5 (lower is better)
Translates to: LSLSLSLSFISLCLF*LHKYYQALKEGLTC
Trigger: GCAAGTCAGACCTTCCTTCAAAGCCTGGTAATATTTATGTAGGCAAAAGAGACAGAGAGAGATAAAAGAGAGGGAGAGGGAGAGAGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CAA 90 bp GTAATTTGTAATCAGAAGATGCTTGAGTTCCATCATTTGCATTACCTACCTGTGAGGCGCCACACGGGCTaGGCAGAGTTTCCTAGAAAA +
Preference number: 5 (lower is better)
Translates to: VICNQKMLEFHHLHYLPVRRHTG*AEFPRK
Trigger: TTTTCTAGGAAACTCTGCCAAGCCCGTGTGGCGCCT...CACAGGTAGGTAATGCAAATGATGGAACTCAAGCATCTTCTGATTACAAATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CAA 90 bp GTGTGCCAGGAAAACTACTACAAAGAATCAACGGATGTAGTGAAATCTGCATCAATTCACTTCCTCAGCTaGTGTCCCCAGAAAAGCACC +
Preference number: 5 (lower is better)
Translates to: VCQENYYKESTDVVKSASIHFLS*CPQKST
Trigger: GGTGCTTTTCTGGGGACACAAGCTGAGGAAGTGAAT...TGATGCAGATTTCACTACATCCGTTGATTCTTTGTAGTAGTTTTCCTGGCACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CAA 90 bp TTTAAGATCCAAGGCATTTCTTTAGCTACTAATATACTCCGGAATGTTCCTTTCCCTAGAAAAAGAGCCTaGCCCCGGTCGTCTTTGCCT +
Preference number: 5 (lower is better)
Translates to: FKIQGISLATNILRNVPFPRKRA*PRSSLP
Trigger: AGGCAAAGACGACCGGGGCAAGGCTCTTTTTCTAGG...GAAAGGAACATTCCGGAGTATATTAGTAGCTAAAGAAATGCCTTGGATCTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CAA 90 bp ATTCACTTCCTCAGCTTGTGTCCCCAGAAAAGCACCATGTTTCCATACACTAAAGTTACTCCTCATTGGTaGAGTTTTCTTCCAGCGTGT +
Preference number: 5 (lower is better)
Translates to: IHFLSLCPQKSTMFPYTKVTPHW*SFLPAC
Trigger: ACACGCTGGAAGAAAACTCAACCAATGAGGAGTAAC...TTTAGTGTATGGAAACATGGTGCTTTTCTGGGGACACAAGCTGAGGAAGTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CAA 90 bp GTAATTTGTAATCAGAAGATGCTTGAGTTCCATCATTTGCATTACCTACCTGTGTACATGAGACAGCAGTaGCCATTTTTCACGGCGGGC +
Preference number: 5 (lower is better)
Translates to: VICNQKMLEFHHLHYLPVYMRQQ*PFFTAG
Trigger: GCCCGCCGTGAAAAATGGCAACTGCTGTCTCATGTA...CACAGGTAGGTAATGCAAATGATGGAACTCAAGCATCTTCTGATTACAAATTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CAA 90 bp TTTAAGATCCAAGGCATTTCTTTAGCTACTAATATACTCCGGAATGTTCCTTTCAGGCCGGGAAGGGTGTaGTTGGTTCTGTGGGTAGAA +
Preference number: 5 (lower is better)
Translates to: FKIQGISLATNILRNVPFRPGRV*LVLWVE
Trigger: TTCTACCCACAGAACCAACAACACCCTTCCCGGCCT...GAAAGGAACATTCCGGAGTATATTAGTAGCTAAAGAAATGCCTTGGATCTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CAA 90 bp TGTTGTTCAGATATCAAATACCATATGCCAATTCAGGTATTTGGCACATGGGTCTTGGGAAAGGAGTCGTaGCCTATTTGGATCCTCTGC +
Preference number: 5 (lower is better)
Translates to: CCSDIKYHMPIQVFGTWVLGKES*PIWILC
Trigger: GCAGAGGATCCAAATAGGCAACGACTCCTTTCCCAA...GACCCATGTGCCAAATACCTGAATTGGCATATGGTATTTGATATCTGAACAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CAA 90 bp TGTTGTTCAGATATCAAATACCATATGCCAATTCAGGTATTTGGCACATGGGTCTGCCAATTCAGGTATTaGGCACATGGGTCTGGCATC +
Preference number: 5 (lower is better)
Translates to: CCSDIKYHMPIQVFGTWVCQFRY*AHGSGI
Trigger: GATGCCAGACCCATGTGCCAAATACCTGAATTGGCA...GACCCATGTGCCAAATACCTGAATTGGCATATGGTATTTGATATCTGAACAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CAA 90 bp GTAATTTGTAATCAGAAGATGCTTGAGTTCCATCATTTGCATTACCTACCTGTGTGTAATCCCAACACTTaGGGAGGCCTAATCGGCGGA +
Preference number: 5 (lower is better)
Translates to: VICNQKMLEFHHLHYLPVCNPNT*GGLIGG
Trigger: TCCGCCGATTAGGCCTCCCAAAGTGTTGGGATTACA...CACAGGTAGGTAATGCAAATGATGGAACTCAAGCATCTTCTGATTACAAATTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CAA 90 bp TGTTGTTCAGATATCAAATACCATATGCCAATTCAGGTATTTGGCACATGGGTCCCAATAACTGGAATCTaGAAGCAGCAGTGCTGCGGT +
Preference number: 5 (lower is better)
Translates to: CCSDIKYHMPIQVFGTWVPITGI*KQQCCG
Trigger: ACCGCAGCACTGCTGCTTCAAGATTCCAGTTATTGG...GACCCATGTGCCAAATACCTGAATTGGCATATGGTATTTGATATCTGAACAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CAA 90 bp TGTTGTTCAGATATCAAATACCATATGCCAATTCAGGTATTTGGCACATGGGTCAGCTTGAGTCTGCTGTaGCACAGTCTTGTTGCTGAT +
Preference number: 5 (lower is better)
Translates to: CCSDIKYHMPIQVFGTWVSLSLL*HSLVAD
Trigger: ATCAGCAACAAGACTGTGCAACAGCAGACTCAAGCT...GACCCATGTGCCAAATACCTGAATTGGCATATGGTATTTGATATCTGAACAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CAA 90 bp GTGTGCCAGGAAAACTACTACAAAGAATCAACGGATGTAGTGAAATCTGCATCAGTGTCCGCAATCCCTTaGTTTGTTCCCTGTAATTAC +
Preference number: 5 (lower is better)
Translates to: VCQENYYKESTDVVKSASVSAIP*FVPCNY
Trigger: GTAATTACAGGGAACAAACAAAGGGATTGCGGACAC...TGATGCAGATTTCACTACATCCGTTGATTCTTTGTAGTAGTTTTCCTGGCACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CAA 90 bp GTGTGCCAGGAAAACTACTACAAAGAATCAACGGATGTAGTGAAATCTGCATCAATCTGTATTCCACCATaGGTTGGGATACCAAAGTGC +
Preference number: 5 (lower is better)
Translates to: VCQENYYKESTDVVKSASICIPP*VGIPKC
Trigger: GCACTTTGGTATCCCAACCAATGGTGGAATACAGAT...TGATGCAGATTTCACTACATCCGTTGATTCTTTGTAGTAGTTTTCCTGGCACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CAA 90 bp ATTCACTTCCTCAGCTTGTGTCCCCAGAAAAGCACCATGTTTCCATACACTAAAGAGTGGAATTTGCACTaGCATTGTCATTTTCCTGCA +
Preference number: 5 (lower is better)
Translates to: IHFLSLCPQKSTMFPYTKEWNLH*HCHFPA
Trigger: TGCAGGAAAATGACAATGCAAGTGCAAATTCCACTC...TTTAGTGTATGGAAACATGGTGCTTTTCTGGGGACACAAGCTGAGGAAGTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CAA 90 bp TGTTGTTCAGATATCAAATACCATATGCCAATTCAGGTATTTGGCACATGGGTCCGTACAAATACATCATaGACCTCCCTGTGTCACCTG +
Preference number: 5 (lower is better)
Translates to: CCSDIKYHMPIQVFGTWVRTNTS*TSLCHL
Trigger: CAGGTGACACAGGGAGGTCAATGATGTATTTGTACG...GACCCATGTGCCAAATACCTGAATTGGCATATGGTATTTGATATCTGAACAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CAA 90 bp ATTCACTTCCTCAGCTTGTGTCCCCAGAAAAGCACCATGTTTCCATACACTAAATCCAAACAGTATTGCTaGCAAGGAATTGTCTTTCTG +
Preference number: 5 (lower is better)
Translates to: IHFLSLCPQKSTMFPYTKSKQYC*QGIVFL
Trigger: CAGAAAGACAATTCCTTGCAAGCAATACTGTTTGGA...TTTAGTGTATGGAAACATGGTGCTTTTCTGGGGACACAAGCTGAGGAAGTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CAA 90 bp GTAATTTGTAATCAGAAGATGCTTGAGTTCCATCATTTGCATTACCTACCTGTGTTTTCTTCCAGCGTGTaGATGCCTCCAAAGCTCAGT +
Preference number: 5 (lower is better)
Translates to: VICNQKMLEFHHLHYLPVFSSSV*MPPKLS
Trigger: ACTGAGCTTTGGAGGCATCAACACGCTGGAAGAAAA...CACAGGTAGGTAATGCAAATGATGGAACTCAAGCATCTTCTGATTACAAATTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CAA 90 bp AAATGTGTTAACTGTCTGATTCCACCTATTATGGAGAGCACTTGTTTGTTCAGCTTCCGTTACTCCTCATaGGTTGAGTTTTCTTCCAGC +
Preference number: 5 (lower is better)
Translates to: KCVNCLIPPIMESTCLFSFRYSS*VEFSSS
Trigger: GCTGGAAGAAAACTCAACCAATGAGGAGTAACGGAA...GCTGAACAAACAAGTGCTCTCCATAATAGGTGGAATCAGACAGTTAACACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CAA 90 bp ATTCACTTCCTCAGCTTGTGTCCCCAGAAAAGCACCATGTTTCCATACACTAAAGAAAGCCCACCTTCATaGTCAAAAGAAAAACTTCCT +
Preference number: 5 (lower is better)
Translates to: IHFLSLCPQKSTMFPYTKESPPS*SKEKLP
Trigger: AGGAAGTTTTTCTTTTGACAATGAAGGTGGGCTTTC...TTTAGTGTATGGAAACATGGTGCTTTTCTGGGGACACAAGCTGAGGAAGTGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CAA 90 bp ATTCACTTCCTCAGCTTGTGTCCCCAGAAAAGCACCATGTTTCCATACACTAAATTTAAGCCTCCAATGTaGCCACGAAGTATTCTTCTT +
Preference number: 5 (lower is better)
Translates to: IHFLSLCPQKSTMFPYTKFKPPM*PRSILL
Trigger: AAGAAGAATACTTCGTGGCAACATTGGAGGCTTAAA...TTTAGTGTATGGAAACATGGTGCTTTTCTGGGGACACAAGCTGAGGAAGTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CAA 90 bp TGTTGTTCAGATATCAAATACCATATGCCAATTCAGGTATTTGGCACATGGGTCTCCGACTGTAAATATTaGTGGAGCACGCTTTCAAAC +
Preference number: 5 (lower is better)
Translates to: CCSDIKYHMPIQVFGTWVSDCKY*WSTLSN
Trigger: GTTTGAAAGCGTGCTCCACAAATATTTACAGTCGGA...GACCCATGTGCCAAATACCTGAATTGGCATATGGTATTTGATATCTGAACAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CAA 90 bp ATTCACTTCCTCAGCTTGTGTCCCCAGAAAAGCACCATGTTTCCATACACTAAATATTATGGAGAGCACTaGTTTGTTCAGCTAAAAAGG +
Preference number: 5 (lower is better)
Translates to: IHFLSLCPQKSTMFPYTKYYGEH*FVQLKR
Trigger: CCTTTTTAGCTGAACAAACAAGTGCTCTCCATAATA...TTTAGTGTATGGAAACATGGTGCTTTTCTGGGGACACAAGCTGAGGAAGTGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CAA 90 bp ATTCACTTCCTCAGCTTGTGTCCCCAGAAAAGCACCATGTTTCCATACACTAAATTTCCTGTCATTCTTTaGTTTCTGCTATCTGCCTAT +
Preference number: 5 (lower is better)
Translates to: IHFLSLCPQKSTMFPYTKFPVIL*FLLSAY
Trigger: ATAGGCAGATAGCAGAAACAAAAGAATGACAGGAAA...TTTAGTGTATGGAAACATGGTGCTTTTCTGGGGACACAAGCTGAGGAAGTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CAA 90 bp ATTCACTTCCTCAGCTTGTGTCCCCAGAAAAGCACCATGTTTCCATACACTAAAGTAATCAGAAGATGCTaGAGTTCCATCATTTGCATT +
Preference number: 5 (lower is better)
Translates to: IHFLSLCPQKSTMFPYTKVIRRC*SSIICI
Trigger: AATGCAAATGATGGAACTCAAGCATCTTCTGATTAC...TTTAGTGTATGGAAACATGGTGCTTTTCTGGGGACACAAGCTGAGGAAGTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CAA 90 bp CCAATAAAAGTGAGTGGAATTTGCACTTGCATTGTCATTTTCCTGCAAGAATGGGTCAGTAGTAGCCTTTaGGGAGTGGAAATCGAAAAT +
Preference number: 5 (lower is better)
Translates to: PIKVSGICTCIVIFLQEWVSSSL*GVEIEN
Trigger: ATTTTCGATTTCCACTCCCAAAAGGCTACTACTGAC...CCATTCTTGCAGGAAAATGACAATGCAAGTGCAAATTCCACTCACTTTTATTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CAA 90 bp TGTTGTTCAGATATCAAATACCATATGCCAATTCAGGTATTTGGCACATGGGTCTTCTCTACGGTCCCTTaGGATGGGTTATTTGATTTT +
Preference number: 5 (lower is better)
Translates to: CCSDIKYHMPIQVFGTWVFSTVP*DGLFDF
Trigger: AAAATCAAATAACCCATCCAAAGGGACCGTAGAGAA...GACCCATGTGCCAAATACCTGAATTGGCATATGGTATTTGATATCTGAACAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CAA 90 bp GTAATTTGTAATCAGAAGATGCTTGAGTTCCATCATTTGCATTACCTACCTGTGAAAATGACCTTCTACTaGGCTAGCACGCCAATAACT +
Preference number: 5 (lower is better)
Translates to: VICNQKMLEFHHLHYLPVKMTFY*ASTPIT
Trigger: AGTTATTGGCGTGCTAGCCAAGTAGAAGGTCATTTT...CACAGGTAGGTAATGCAAATGATGGAACTCAAGCATCTTCTGATTACAAATTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CAA 90 bp CCAATAAAAGTGAGTGGAATTTGCACTTGCATTGTCATTTTCCTGCAAGAATGGAATAAAAAGCTGTGGTaGTGTCCTTGTTTGGATTCA +
Preference number: 5 (lower is better)
Translates to: PIKVSGICTCIVIFLQEWNKKLW*CPCLDS
Trigger: TGAATCCAAACAAGGACACAACCACAGCTTTTTATT...CCATTCTTGCAGGAAAATGACAATGCAAGTGCAAATTCCACTCACTTTTATTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CAA 90 bp TGTTGTTCAGATATCAAATACCATATGCCAATTCAGGTATTTGGCACATGGGTCTTTTCCACCTTTTGGTaGGCATTATCTCCAAACAAA +
Preference number: 5 (lower is better)
Translates to: CCSDIKYHMPIQVFGTWVFSTFW*ALSPNK
Trigger: TTTGTTTGGAGATAATGCCAACCAAAAGGTGGAAAA...GACCCATGTGCCAAATACCTGAATTGGCATATGGTATTTGATATCTGAACAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CAA 90 bp TTTAAGATCCAAGGCATTTCTTTAGCTACTAATATACTCCGGAATGTTCCTTTCAACCTCCAAACAGTATaGCTTGCAAGGAATTGTCTT +
Preference number: 5 (lower is better)
Translates to: FKIQGISLATNILRNVPFNLQTV*LARNCL
Trigger: AAGACAATTCCTTGCAAGCAATACTGTTTGGAGGTT...GAAAGGAACATTCCGGAGTATATTAGTAGCTAAAGAAATGCCTTGGATCTTAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CAA 90 bp AATAAAAGTGAGTGGAATTTGCACTTGCATTGTCATTTTCCTGCAAGAATGGAATGGTTGAAGTTTTATTaGCAAGCGATGTGTGTGTGT +
Preference number: 5 (lower is better)
Translates to: NKSEWNLHLHCHFPARMEWLKFY*QAMCVC
Trigger: ACACACACACATCGCTTGCAAATAAAACTTCAACCA...TTCCATTCTTGCAGGAAAATGACAATGCAAGTGCAAATTCCACTCACTTTTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CAA 90 bp GTAATTTGTAATCAGAAGATGCTTGAGTTCCATCATTTGCATTACCTACCTGTGTTTAATCTGAATGTCTaGTCTGTGGTAAACATAGCC +
Preference number: 5 (lower is better)
Translates to: VICNQKMLEFHHLHYLPVFNLNV*SVVNIA
Trigger: GGCTATGTTTACCACAGACAAGACATTCAGATTAAA...CACAGGTAGGTAATGCAAATGATGGAACTCAAGCATCTTCTGATTACAAATTAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CAA 90 bp TTTAAGATCCAAGGCATTTCTTTAGCTACTAATATACTCCGGAATGTTCCTTTCTTAGTTTTCCACCTTTaGGTTGGCATTATCTCCAAA +
Preference number: 5 (lower is better)
Translates to: FKIQGISLATNILRNVPFLVFHL*VGIISK
Trigger: TTTGGAGATAATGCCAACCAAAAGGTGGAAAACTAA...GAAAGGAACATTCCGGAGTATATTAGTAGCTAAAGAAATGCCTTGGATCTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CAA 90 bp AATAAAAGTGAGTGGAATTTGCACTTGCATTGTCATTTTCCTGCAAGAATGGAAGGGTCTGGCATCCAATaGCTTATTTCATTTATGTTT +
Preference number: 5 (lower is better)
Translates to: NKSEWNLHLHCHFPARMEGSGIQ*LISFMF
Trigger: AAACATAAATGAAATAAGCAATTGGATGCCAGACCC...TTCCATTCTTGCAGGAAAATGACAATGCAAGTGCAAATTCCACTCACTTTTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS-3UTR CAA 90 bp AATAAAAGTGAGTGGAATTTGCACTTGCATTGTCATTTTCCTGCAAGAATGGAAAAGTCTTTTTATTCATaGTCACCCAATACCTACCTG +
Preference number: 5 (lower is better)
Translates to: NKSEWNLHLHCHFPARMEKSFYS*SPNTYL
Trigger: CAGGTAGGTATTGGGTGACAATGAATAAAAAGACTT...TTCCATTCTTGCAGGAAAATGACAATGCAAGTGCAAATTCCACTCACTTTTATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS GCA 72 bp CCCATGCTCGCCAGGAGCGCGGGCCAGGAGGGCTCCTaGTGCCGCCGCTGCTGCTGCTGCTGCTGCCGCTGC +
Preference number: 6 (lower is better)
Translates to: PMLARSAGQEGS*CRRCCCCCCRC
Trigger: GCAGCGGCAGCAGCAGCAGCAGCAGCGGCGGCAGCAGGAGCCCTCCTGGCCCGCGCTCCTGGCGAGCATGGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS GCA 72 bp AGCGCGGGCCAGGAGGGCTCCTGCTGCCGCCGCTGCTaGTGCTGCTGCTGCCGCTGCCTCTGCTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: SAGQEGSCCRRC*CCCCRCLCCCC
Trigger: GCAGCAGCAGCAGAGGCAGCGGCAGCAGCAGCAGCAGCAGCGGCGGCAGCAGGAGCCCTCCTGGCCCGCGCT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS GCA 72 bp AGGAGCGCGGGCCAGGAGGGCTCCTGCTGCCGCCGCTaGTGCTGCTGCTGCTGCCGCTGCCTCTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: RSAGQEGSCCRR*CCCCCRCLCCC
Trigger: GCAGCAGCAGAGGCAGCGGCAGCAGCAGCAGCAGCAGCGGCGGCAGCAGGAGCCCTCCTGGCCCGCGCTCCT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS GCA 72 bp GTCTGTGTGCCTGGGCGGCGGGCGAGGACTCCCCCATaGTCGCCAGGAGCGCGGGCCAGGAGGGCTCCTGCT +
Preference number: 6 (lower is better)
Translates to: VCVPGRRARTPP*SPGARARRAPA
Trigger: AGCAGGAGCCCTCCTGGCCCGCGCTCCTGGCGAGCATGGGGGAGTCCTCGCCCGCCGCCCAGGCACACAGAC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS GCA 72 bp GAAAAAGAGCCTTGCCCCGGTCGTCTTTGCCTCGGTTaGCCTTGCCGCCGCCGCCGCCGCCGTCTCCCGGGG +
Preference number: 6 (lower is better)
Translates to: EKEPCPGRLCLG*PCRRRRRRLPG
Trigger: CCCCGGGAGACGGCGGCGGCGGCGGCGGCAAGGGCAACCGAGGCAAAGACGACCGGGGCAAGGCTCTTTTTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS CCA 72 bp CGCCTCCCGCGGAGCTCCGGGCCGAATCGCCTGGGCTaGGCCTCCCGAGAGCCACAGTCATCTTCAGTCCGC +
Preference number: 6 (lower is better)
Translates to: RLPRSSGPNRLG*ASREPQSSSVR
Trigger: GCGGACTGAAGATGACTGTGGCTCTCGGGAGGCCCAGCCCAGGCGATTCGGCCCGGAGCTCCGCGGGAGGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS CCA 72 bp GACGCCGCCTCCCGCGGAGCTCCGGGCCGAATCGCCTaGGCTGGGCCTCCCGAGAGCCACAGTCATCTTCAG +
Preference number: 6 (lower is better)
Translates to: DAASRGAPGRIA*AGPPESHSHLQ
Trigger: CTGAAGATGACTGTGGCTCTCGGGAGGCCCAGCCCAGGCGATTCGGCCCGGAGCTCCGCGGGAGGCGGCGTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS GCA 72 bp CTCTGCTGCTGCTGCTGCTGCTGCTGCTGCCGCTGCTaGTGCTGGTGCTCCTTGTCCCGGGCCCGGGTCAGC +
Preference number: 6 (lower is better)
Translates to: LCCCCCCCCCRC*CWCSLSRARVS
Trigger: GCTGACCCGGGCCCGGGACAAGGAGCACCAGCAGCAGCAGCGGCAGCAGCAGCAGCAGCAGCAGCAGCAGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS GCA 72 bp TGCCTCTGCTGCTGCTGCTGCTGCTGCTGCTGCCGCTaGTGCTGCTGGTGCTCCTTGTCCCGGGCCCGGGTC +
Preference number: 6 (lower is better)
Translates to: CLCCCCCCCCCR*CCWCSLSRARV
Trigger: GACCCGGGCCCGGGACAAGGAGCACCAGCAGCAGCAGCGGCAGCAGCAGCAGCAGCAGCAGCAGCAGAGGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS CAA 72 bp AGAAAAAGAGCCTTGCCCCGGTCGTCTTTGCCTCGGTaGCCCTTGCCGCCGCCGCCGCCGCCGTCTCCCGGG +
Preference number: 6 (lower is better)
Translates to: RKRALPRSSLPR*PLPPPPPPSPG
Trigger: CCCGGGAGACGGCGGCGGCGGCGGCGGCAAGGGCAACCGAGGCAAAGACGACCGGGGCAAGGCTCTTTTTCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS GCA 72 bp TGCTGCTGCTGCTGCTGCTGCTGCTGCCGCTGCTGCTaGTGGTGCTCCTTGTCCCGGGCCCGGGTCAGCTTG +
Preference number: 6 (lower is better)
Translates to: CCCCCCCCCRCC*WCSLSRARVSL
Trigger: CAAGCTGACCCGGGCCCGGGACAAGGAGCACCAGCAGCAGCAGCGGCAGCAGCAGCAGCAGCAGCAGCAGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS CAA 90 bp GGCTTGGCAGAGTTTCCTAGAAAAAGAGCCTTGCCCCGGTCGTCTTaGCCTCGGTTGCCCTTGCCGCCGCCGCCGCCGCCGTCTCCCGGG +
Preference number: 6 (lower is better)
Translates to: GLAEFPRKRALPRSS*PRLPLPPPPPPSPG
Trigger: CCCGGGAGACGGCGGCGGCGGCGGCGGCAAGGGCAACCGAGGCAAAGACGACCGGGGCAAGGCTCTTTTTCTAGGAAACTCTGCCAAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS TCA 72 bp AGTTCCTGGCGCACACCGCGTCCGCATTCTCCACCGTaGAGCACTGGCCCGAGGACGCGCCCTGGGGGTAAC +
Preference number: 6 (lower is better)
Translates to: SSWRTPRPHSPP*STGPRTRPGGN
Trigger: GTTACCCCCAGGGCGCGTCCTCGGGCCAGTGCTTCACGGTGGAGAATGCGGACGCGGTGTGCGCCAGGAACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS CCA 72 bp AATGGAGAGAGAGAGAGAGAGAGAGACGGAGGAGGCTaGTGCTGGTGGCCGGCGGCGAGGCTGGGTGCAGGG +
Preference number: 6 (lower is better)
Translates to: NGERERERDGGG*CWWPAARLGAG
Trigger: CCCTGCACCCAGCCTCGCCGCCGGCCACCAGCACCAGCCTCCTCCGTCTCTCTCTCTCTCTCTCTCTCCATT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS CAA 72 bp GAGTTTCCTAGAAAAAGAGCCTTGCCCCGGTCGTCTTaGCCTCGGTTGCCCTTGCCGCCGCCGCCGCCGCCG +
Preference number: 6 (lower is better)
Translates to: EFPRKRALPRSS*PRLPLPPPPPP
Trigger: CGGCGGCGGCGGCGGCGGCAAGGGCAACCGAGGCAAAGACGACCGGGGCAAGGCTCTTTTTCTAGGAAACTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS GCA 72 bp AGTTTCCTAGAAAAAGAGCCTTGCCCCGGTCGTCTTTaGCTCGGTTGCCCTTGCCGCCGCCGCCGCCGCCGT +
Preference number: 6 (lower is better)
Translates to: SFLEKEPCPGRL*LGCPCRRRRRR
Trigger: ACGGCGGCGGCGGCGGCGGCAAGGGCAACCGAGGCAAAGACGACCGGGGCAAGGCTCTTTTTCTAGGAAACT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS CCA 72 bp GCTGCTGGTGCTCCTTGTCCCGGGCCCGGGTCAGCTTaGCCTCGGCGCAGAACCACAAGTGATCAGAGAGCA +
Preference number: 6 (lower is better)
Translates to: AAGAPCPGPGSA*PRRRTTSDQRA
Trigger: TGCTCTCTGATCACTTGTGGTTCTGCGCCGAGGCCAAGCTGACCCGGGCCCGGGACAAGGAGCACCAGCAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS CAA 90 bp GCCGTCGTCATACTGCCGACACATCCAAGCACCCCTGGTCATATTTaGGGAACGCACAGCCCTGGCCGACTCCACCGTGAGGGCGCCTGT +
Preference number: 6 (lower is better)
Translates to: AVVILPTHPSTPGHI*GTHSPGRLHREGAC
Trigger: ACAGGCGCCCTCACGGTGGAGTCGGCCAGGGCTGTGCGTTCCCAAAATATGACCAGGGGTGCTTGGATGTGTCGGCAGTATGACGACGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS TCA 72 bp TATTTTGGGAACGCACAGCCCTGGCCGACTCCACCGTaGGGGCGCCTGTGCCGGTGTCACCACAATATGCAT +
Preference number: 6 (lower is better)
Translates to: YFGNAQPWPTPP*GRLCRCHHNMH
Trigger: ATGCATATTGTGGTGACACCGGCACAGGCGCCCTCACGGTGGAGTCGGCCAGGGCTGTGCGTTCCCAAAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS GCA 72 bp ACACGGGCTTGGCAGAGTTTCCTAGAAAAAGAGCCTTaGCCCGGTCGTCTTTGCCTCGGTTGCCCTTGCCGC +
Preference number: 6 (lower is better)
Translates to: TRAWQSFLEKEP*PGRLCLGCPCR
Trigger: GCGGCAAGGGCAACCGAGGCAAAGACGACCGGGGCAAGGCTCTTTTTCTAGGAAACTCTGCCAAGCCCGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS CCA 72 bp AGCCGTCGTCATACTGCCGACACATCCAAGCACCCCTaGTCATATTTTGGGAACGCACAGCCCTGGCCGACT +
Preference number: 6 (lower is better)
Translates to: SRRHTADTSKHP*SYFGNAQPWPT
Trigger: AGTCGGCCAGGGCTGTGCGTTCCCAAAATATGACCAGGGGTGCTTGGATGTGTCGGCAGTATGACGACGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS GCA 72 bp GACAGCAGTTGCCATTTTTCACGGCGGGCCAGCTGCTaGTGTGGTGACACTCGTCCTTCCGTTACTCCTCAT +
Preference number: 6 (lower is better)
Translates to: DSSCHFSRRASC*CGDTRPSVTPH
Trigger: ATGAGGAGTAACGGAAGGACGAGTGTCACCACAGCAGCAGCTGGCCCGCCGTGAAAAATGGCAACTGCTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS TCA 72 bp TTGCCATTTTTCACGGCGGGCCAGCTGCTGCTGTGGTaGCACTCGTCCTTCCGTTACTCCTCATTGGTTGAG +
Preference number: 6 (lower is better)
Translates to: LPFFTAGQLLLW*HSSFRYSSLVE
Trigger: CTCAACCAATGAGGAGTAACGGAAGGACGAGTGTCACCACAGCAGCAGCTGGCCCGCCGTGAAAAATGGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS CAA 90 bp TCGTCCTTCCGTTACTCCTCATTGGTTGAGTTTTCTTCCAGCGTGTaGATGCCTCCAAAGCTCAGTCCGGCTGTGTTCTGTGCTGCCGAG +
Preference number: 6 (lower is better)
Translates to: SSFRYSSLVEFSSSV*MPPKLSPAVFCAAE
Trigger: CTCGGCAGCACAGAACACAGCCGGACTGAGCTTTGGAGGCATCAACACGCTGGAAGAAAACTCAACCAATGAGGAGTAACGGAAGGACGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS TCA 72 bp GTCTGCTGTTGCACAGTCTTGTTGCTGATGACACTGTaGGCGATGTCCTGTGACAGGAGCCACTTTTCTCTA +
Preference number: 6 (lower is better)
Translates to: VCCCTVLLLMTL*AMSCDRSHFSL
Trigger: TAGAGAAAAGTGGCTCCTGTCACAGGACATCGCTCACAGTGTCATCAGCAACAAGACTGTGCAACAGCAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS TCA 72 bp GTGGTGACACTCGTCCTTCCGTTACTCCTCATTGGTTaGGTTTTCTTCCAGCGTGTTGATGCCTCCAAAGCT +
Preference number: 6 (lower is better)
Translates to: VVTLVLPLLLIG*VFFQRVDASKA
Trigger: AGCTTTGGAGGCATCAACACGCTGGAAGAAAACTCAACCAATGAGGAGTAACGGAAGGACGAGTGTCACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS GCA 72 bp CACCGTGAGGGCGCCTGTGCCGGTGTCACCACAATATaGATTGACTTAAAGGGTTTAATTTCCTTATCCCCT +
Preference number: 6 (lower is better)
Translates to: HREGACAGVTTI*IDLKGLISLSP
Trigger: AGGGGATAAGGAAATTAAACCCTTTAAGTCAATGCATATTGTGGTGACACCGGCACAGGCGCCCTCACGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS CAA 90 bp GCTGTGAGCACTGTGTGTAAGAGAATCAGTACAAGAACACACAGCTaGAGTCTGCTGTTGCACAGTCTTGTTGCTGATGACACTGTGAGC +
Preference number: 6 (lower is better)
Translates to: AVSTVCKRISTRTHS*SLLLHSLVADDTVS
Trigger: GCTCACAGTGTCATCAGCAACAAGACTGTGCAACAGCAGACTCAAGCTGTGTGTTCTTGTACTGATTCTCTTACACACAGTGCTCACAGC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS CAA 72 bp AGAATCAGTACAAGAACACACAGCTTGAGTCTGCTGTaGCACAGTCTTGTTGCTGATGACACTGTGAGCGAT +
Preference number: 6 (lower is better)
Translates to: RISTRTHSLSLL*HSLVADDTVSD
Trigger: ATCGCTCACAGTGTCATCAGCAACAAGACTGTGCAACAGCAGACTCAAGCTGTGTGTTCTTGTACTGATTCT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS TCA 72 bp CTGTGTGTAAGAGAATCAGTACAAGAACACACAGCTTaGGTCTGCTGTTGCACAGTCTTGTTGCTGATGACA +
Preference number: 6 (lower is better)
Translates to: LCVRESVQEHTA*VCCCTVLLLMT
Trigger: TGTCATCAGCAACAAGACTGTGCAACAGCAGACTCAAGCTGTGTGTTCTTGTACTGATTCTCTTACACACAG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS CAA 72 bp CAGGATTTCACCGAGTACTCCTCCGACTGTAAATATTaGTGGAGCACGCTTTCAAACTCTTCGTATTTCTCC +
Preference number: 6 (lower is better)
Translates to: QDFTEYSSDCKY*WSTLSNSSYFS
Trigger: GGAGAAATACGAAGAGTTTGAAAGCGTGCTCCACAAATATTTACAGTCGGAGGAGTACTCGGTGAAATCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4
CDS CAA 72 bp ACTGTGTGTAAGAGAATCAGTACAAGAACACACAGCTaGAGTCTGCTGTTGCACAGTCTTGTTGCTGATGAC +
Preference number: 6 (lower is better)
Translates to: TVCKRISTRTHS*SLLLHSLVADD
Trigger: GTCATCAGCAACAAGACTGTGCAACAGCAGACTCAAGCTGTGTGTTCTTGTACTGATTCTCTTACACACAGT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375915.4