RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM13C (Homo sapiens)

Ensembl gene IDs: ENSG00000148541

Ensembl transcript IDs: ENST00000422313.6, ENST00000435852.6, ENST00000468696.1, ENST00000468840.6, ENST00000470220.5, ENST00000477101.1, ENST00000489341.5, ENST00000503444.1, ENST00000507568.1, ENST00000507862.1, ENST00000510215.6, ENST00000512919.5, ENST00000513377.1, ENST00000611933.4, ENST00000614220.4, ENST00000618427.4, ENST00000618804.5, ENST00000619059.4, ENST00000621119.4, ENST00000622363.4

Found 692 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CGCAATACGCTGTCCACCAGCACGGTCGCCTCTACATTCTGCTGCTaGGGCTCCCAAGAGGGCGGCGCGTGCTCTTCTACCAGAGCCCCT +
Preference number: 1 (lower is better)
Translates to: RNTLSTSTVASTFCC*GSQEGGACSSTRAP
Trigger: AGGGGCTCTGGTAGAAGAGCACGCGCCGCCCTCTTGGGAGCCGCAGCAGCAGAATGTAGAGGCGACCGTGCTGGTGGACAGCGTATTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619059.4
ENST00000622363.4
3UTR GCA 90 bp GGTCGCAATACGCTGTCCACCAGCACGGTCGCCTCTACATTCTGCTaGTGCGGCTCCCAAGAGGGCGGCGCGTGCTCTTCTACCAGAGCC +
Preference number: 1 (lower is better)
Translates to: GRNTLSTSTVASTFC*CGSQEGGACSSTRA
Trigger: GGCTCTGGTAGAAGAGCACGCGCCGCCCTCTTGGGAGCCGCAGCAGCAGAATGTAGAGGCGACCGTGCTGGTGGACAGCGTATTGCGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619059.4
ENST00000622363.4
3UTR GCA 90 bp CTGGGTCGCAATACGCTGTCCACCAGCACGGTCGCCTCTACATTCTaGTGCTGCGGCTCCCAAGAGGGCGGCGCGTGCTCTTCTACCAGA +
Preference number: 1 (lower is better)
Translates to: LGRNTLSTSTVASTF*CCGSQEGGACSSTR
Trigger: TCTGGTAGAAGAGCACGCGCCGCCCTCTTGGGAGCCGCAGCAGCAGAATGTAGAGGCGACCGTGCTGGTGGACAGCGTATTGCGACCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619059.4
ENST00000622363.4
3UTR CCA 90 bp CAGGCATGTCAAGGCAGCATCTGGAGTCTCTTCTCCAGAGGAGCTTaGCTCCGGGCCCGCAGCTTCCGGTTTCCCATTTTCTCTGGGGAC +
Preference number: 1 (lower is better)
Translates to: QACQGSIWSLFSRGA*LRARSFRFPIFSGD
Trigger: GTCCCCAGAGAAAATGGGAAACCGGAAGCTGCGGGCCCGGAGCCAAGCTCCTCTGGAGAAGAGACTCCAGATGCTGCCTTGACATGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR GCA 90 bp GGGCCCGCAGCTTCCGGTTTCCCATTTTCTCTGGGGACTGTGGGTTaGTCACACAACAGGTTTCTAGGTGGACCTTTGGGAGCACTCCCT +
Preference number: 1 (lower is better)
Translates to: GPAASGFPFSLGTVG*SHNRFLGGPLGALP
Trigger: AGGGAGTGCTCCCAAAGGTCCACCTAGAAACCTGTTGTGTGAGCAACCCACAGTCCCCAGAGAAAATGGGAAACCGGAAGCTGCGGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR CCA 90 bp GTGCTGGGTGGAGATGGGGCTGACTCGGGGTCTAAGTTGAATCTCTaGCTTTGGCTGAAGATGGAGCATCGTGGCGACAGCAGTGGGTTA +
Preference number: 1 (lower is better)
Translates to: VLGGDGADSGSKLNL*LWLKMEHRGDSSGL
Trigger: TAACCCACTGCTGTCGCCACGATGCTCCATCTTCAGCCAAAGCCAGAGATTCAACTTAGACCCCGAGTCAGCCCCATCTCCACCCAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR CCA 90 bp TCTCATGAGCTGGTGTTCCTGCTCTCACCTGACACTCTGACTGGCTaGATACCACATGCTCTGTCTCCTGACTTTCTCCGTGGCTCCTCC +
Preference number: 1 (lower is better)
Translates to: SHELVFLLSPDTLTG*IPHALSPDFLRGSS
Trigger: GGAGGAGCCACGGAGAAAGTCAGGAGACAGAGCATGTGGTATCCAGCCAGTCAGAGTGTCAGGTGAGAGCAGGAACACCAGCTCATGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR CCA 90 bp GGTGGAGATGGGGCTGACTCGGGGTCTAAGTTGAATCTCTGGCTTTaGCTGAAGATGGAGCATCGTGGCGACAGCAGTGGGTTATCACCA +
Preference number: 1 (lower is better)
Translates to: GGDGADSGSKLNLWL*LKMEHRGDSSGLSP
Trigger: TGGTGATAACCCACTGCTGTCGCCACGATGCTCCATCTTCAGCCAAAGCCAGAGATTCAACTTAGACCCCGAGTCAGCCCCATCTCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR CCA 90 bp AATTTCCGAATTTTCCGCTTGAGGCTCTGGATGTGCTTGGTGAGCTaGGTGATGGTCTGTGGCTCCTTGCCATCTCCACAGCTGCAGCGT +
Preference number: 1 (lower is better)
Translates to: NFRIFRLRLWMCLVS*VMVCGSLPSPQLQR
Trigger: ACGCTGCAGCTGTGGAGATGGCAAGGAGCCACAGACCATCACCCAGCTCACCAAGCACATCCAGAGCCTCAAGCGGAAAATTCGGAAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR GCA 90 bp AGAGTAGGTGAGGTGGTCACCAACAGGAAGGTGAGATGCTGGATCTaGCAAAGAAGGTTGTTGGCTTCCCTGTGGACGGTCTTCATCAGA +
Preference number: 1 (lower is better)
Translates to: RVGEVVTNRKVRCWI*QRRLLASLWTVFIR
Trigger: TCTGATGAAGACCGTCCACAGGGAAGCCAACAACCTTCTTTGGCAGATCCAGCATCTCACCTTCCTGTTGGTGACCACCTCACCTACTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489341.5
ENST00000622363.4
3UTR CCA 90 bp AAGGTGAGATGCTGGATCTGCCAAAGAAGGTTGTTGGCTTCCCTGTaGACGGTCTTCATCAGAGTCCTCTTCCTCCTGAATTGTTGGAAT +
Preference number: 1 (lower is better)
Translates to: KVRCWICQRRLLASL*TVFIRVLFLLNCWN
Trigger: ATTCCAACAATTCAGGAGGAAGAGGACTCTGATGAAGACCGTCCACAGGGAAGCCAACAACCTTCTTTGGCAGATCCAGCATCTCACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489341.5
3UTR TCA 90 bp TCCTCTGGTCTATTCTTGGTTGAAGTCGCACTGTTTCTTGGCACTTaGAGGCATTGTTTTGTGGACTCTCATGAGCTGGTGTTCCTGCTC +
Preference number: 1 (lower is better)
Translates to: SSGLFLVEVALFLGT*RHCFVDSHELVFLL
Trigger: GAGCAGGAACACCAGCTCATGAGAGTCCACAAAACAATGCCTTCAAGTGCCAAGAAACAGTGCGACTTCAACCAAGAATAGACCAGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR GCA 90 bp AATTTTTCTTCAAATTTCCGAATTTTCCGCTTGAGGCTCTGGATGTaGTTGGTGAGCTGGGTGATGGTCTGTGGCTCCTTGCCATCTCCA +
Preference number: 1 (lower is better)
Translates to: NFSSNFRIFRLRLWM*LVSWVMVCGSLPSP
Trigger: TGGAGATGGCAAGGAGCCACAGACCATCACCCAGCTCACCAAGCACATCCAGAGCCTCAAGCGGAAAATTCGGAAATTTGAAGAAAAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR CCA 90 bp AAGGTGAGATGCTGGATCTGCCAAAGAAGGTTGTTGGCTTCCCTGTaGACGGTCTTCATCAGAGTCCTCTTCCTCAATTGTTGGAATAAG +
Preference number: 1 (lower is better)
Translates to: KVRCWICQRRLLASL*TVFIRVLFLNCWNK
Trigger: CTTATTCCAACAATTGAGGAAGAGGACTCTGATGAAGACCGTCCACAGGGAAGCCAACAACCTTCTTTGGCAGATCCAGCATCTCACCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR CCA 90 bp TGTTCAAATTTTTCTTCAAATTTCCGAATTTTCCGCTTGAGGCTCTaGATGTGCTTGGTGAGCTGGGTGATGGTCTGTGGCTCCTTGCCA +
Preference number: 1 (lower is better)
Translates to: CSNFSSNFRIFRLRL*MCLVSWVMVCGSLP
Trigger: TGGCAAGGAGCCACAGACCATCACCCAGCTCACCAAGCACATCCAGAGCCTCAAGCGGAAAATTCGGAAATTTGAAGAAAAATTTGAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR TCA 90 bp ATCAGAGTCCTCTTCCTCCTGAATTGTTGGAATAAGGGAAGGTGTTaGCAAGATTTGCTTGATAATTCTGTATCGGTCATAAAGCGGCTT +
Preference number: 1 (lower is better)
Translates to: IRVLFLLNCWNKGRC*QDLLDNSVSVIKRL
Trigger: AAGCCGCTTTATGACCGATACAGAATTATCAAGCAAATCTTGTCAACACCTTCCCTTATTCCAACAATTCAGGAGGAAGAGGACTCTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489341.5
3UTR TCA 90 bp TTCATCAGAGTCCTCTTCCTCAATTGTTGGAATAAGGGAAGGTGTTaGCAAGATTTGCTTGATAATTCTGTATCGGTCATAAAGCGGCTT +
Preference number: 1 (lower is better)
Translates to: FIRVLFLNCWNKGRC*QDLLDNSVSVIKRL
Trigger: AAGCCGCTTTATGACCGATACAGAATTATCAAGCAAATCTTGTCAACACCTTCCCTTATTCCAACAATTGAGGAAGAGGACTCTGATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR GCA 90 bp ACCATGTCCCATGAAACATCCCTAATACTGGCACTATTAGAATGTTaGATTGGACAAATCCTGAGTCTAAGCCAGTGTGGAAATTATATA +
Preference number: 1 (lower is better)
Translates to: TMSHETSLILALLEC*IGQILSLSQCGNYI
Trigger: TATATAATTTCCACACTGGCTTAGACTCAGGATTTGTCCAATGCAACATTCTAATAGTGCCAGTATTAGGGATGTTTCATGGGACATGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435852.6
3UTR-3UTR GCA 90 bp GGGTCTGCAGAATCTGTCCCATCGGCAAGCACGCTCTGGGTTGATGCTGGCGCCTCTACATTCTGCTGCTaGGGCTCCCAAGAGGGCGGC +
Preference number: 2 (lower is better)
Translates to: GSAESVPSASTLWVDAGASTFCC*GSQEGG
Trigger: GCCGCCCTCTTGGGAGCCGCAGCAGCAGAATGTAGA...GGCGCCAGCATCAACCCAGAGCGTGCTTGCCGATGGGACAGATTCTGCAGACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR CAA 90 bp CCGCTCTCCGCTTTGAAGATGGACTTGGGCTTCCTGGACTTGAAGTaGCCCATGCTGGGTCGCAATACGCTGTCCACCAGCACGGTCGCC +
Preference number: 2 (lower is better)
Translates to: PLSALKMDLGFLDLK*PMLGRNTLSTSTVA
Trigger: GGCGACCGTGCTGGTGGACAGCGTATTGCGACCCAGCATGGGCAACTTCAAGTCCAGGAAGCCCAAGTCCATCTTCAAAGCGGAGAGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619059.4
ENST00000622363.4
3UTR-3UTR GCA 90 bp TTGGGCTTCCTGGACTTGAAGTTGCCCATGCTGGGTCGCAATACGCTGTCCACCCAAGAGGGCGGCGCGTaGTCTTCTACCAGAGCCCCT +
Preference number: 2 (lower is better)
Translates to: LGFLDLKLPMLGRNTLSTQEGGA*SSTRAP
Trigger: AGGGGCTCTGGTAGAAGAGCACGCGCCGCCCTCTTG...GGTGGACAGCGTATTGCGACCCAGCATGGGCAACTTCAAGTCCAGGAAGCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619059.4
ENST00000622363.4
3UTR-3UTR GCA 90 bp TTTCCGCTTGAGGCTCTGGATGTGCTTGGTGAGCTGGGTGATGGTCTGTGGCTCCAAGAGGGCGGCGCGTaGTCTTCTACCAGAGCCCCT +
Preference number: 2 (lower is better)
Translates to: FPLEALDVLGELGDGLWLQEGGA*SSTRAP
Trigger: AGGGGCTCTGGTAGAAGAGCACGCGCCGCCCTCTTG...GAGCCACAGACCATCACCCAGCTCACCAAGCACATCCAGAGCCTCAAGCGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR CAA 90 bp CTCCTCCCGCTCTCCGCTTTGAAGATGGACTTGGGCTTCCTGGACTaGAAGTTGCCCATGCTGGGTCGCAATACGCTGTCCACCAGCACG +
Preference number: 2 (lower is better)
Translates to: LLPLSALKMDLGFLD*KLPMLGRNTLSTST
Trigger: CGTGCTGGTGGACAGCGTATTGCGACCCAGCATGGGCAACTTCAAGTCCAGGAAGCCCAAGTCCATCTTCAAAGCGGAGAGCGGGAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619059.4
ENST00000622363.4
3UTR CAA 90 bp CGGGCCCGCAGCTTCCGGTTTCCCATTTTCTCTGGGGACTGTGGGTaGCTCACACAACAGGTTTCTAGGTGGACCTTTGGGAGCACTCCC +
Preference number: 2 (lower is better)
Translates to: RARSFRFPIFSGDCG*LTQQVSRWTFGSTP
Trigger: GGGAGTGCTCCCAAAGGTCCACCTAGAAACCTGTTGTGTGAGCAACCCACAGTCCCCAGAGAAAATGGGAAACCGGAAGCTGCGGGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR CAA 90 bp TCAGGCATGTCAAGGCAGCATCTGGAGTCTCTTCTCCAGAGGAGCTaGGCTCCGGGCCCGCAGCTTCCGGTTTCCCATTTTCTCTGGGGA +
Preference number: 2 (lower is better)
Translates to: SGMSRQHLESLLQRS*APGPQLPVSHFLWG
Trigger: TCCCCAGAGAAAATGGGAAACCGGAAGCTGCGGGCCCGGAGCCAAGCTCCTCTGGAGAAGAGACTCCAGATGCTGCCTTGACATGCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR CAA 90 bp AGGCTCTGGATGTGCTTGGTGAGCTGGGTGATGGTCTGTGGCTCCTaGCCATCTCCACAGCTGCAGCGTGAAGAACTCCGCGGCATCATA +
Preference number: 2 (lower is better)
Translates to: RLWMCLVSWVMVCGS*PSPQLQREELRGII
Trigger: TATGATGCCGCGGAGTTCTTCACGCTGCAGCTGTGGAGATGGCAAGGAGCCACAGACCATCACCCAGCTCACCAAGCACATCCAGAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR-3UTR GCA 90 bp GTCCCATCGGCAAGCACGCTCTGGGTTGATGCTGGCGCCGGGTCCTTGACTCCAGTGAGATGCTGGATCTaGCAAAGAAGGTTGTTGGCT +
Preference number: 2 (lower is better)
Translates to: VPSASTLWVDAGAGSLTPVRCWI*QRRLLA
Trigger: AGCCAACAACCTTCTTTGGCAGATCCAGCATCTCAC...TGGAGTCAAGGACCCGGCGCCAGCATCAACCCAGAGCGTGCTTGCCGATGGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR-3UTR TCA 90 bp TTTCCGCTTGAGGCTCTGGATGTGCTTGGTGAGCTGGGTGATGGTCTGTGGCTCGGCATCATAAACTGCTaGGTGCTGGGTGGAGATGGG +
Preference number: 2 (lower is better)
Translates to: FPLEALDVLGELGDGLWLGIINC*VLGGDG
Trigger: CCCATCTCCACCCAGCACTCAGCAGTTTATGATGCC...GAGCCACAGACCATCACCCAGCTCACCAAGCACATCCAGAGCCTCAAGCGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR-3UTR CCA 90 bp GCTCTGGATGTGCTTGGTGAGCTGGGTGATGGTCTGTGGCTCCTTGCCATCTCCTTCTGCCCATCTTTGTaGACTGGTGAGGGGTCTGCA +
Preference number: 2 (lower is better)
Translates to: ALDVLGELGDGLWLLAISFCPSL*TGEGSA
Trigger: TGCAGACCCCTCACCAGTCCACAAAGATGGGCAGAA...GGAGATGGCAAGGAGCCACAGACCATCACCCAGCTCACCAAGCACATCCAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR-3UTR GCA 90 bp TTTCCGCTTGAGGCTCTGGATGTGCTTGGTGAGCTGGGTGATGGTCTGTGGCTCCTGTCGGCCTCATTCTaGCCATCTTTGTGGACTGGT +
Preference number: 2 (lower is better)
Translates to: FPLEALDVLGELGDGLWLLSASF*PSLWTG
Trigger: ACCAGTCCACAAAGATGGGCAGAATGAGGCCGACAG...GAGCCACAGACCATCACCCAGCTCACCAAGCACATCCAGAGCCTCAAGCGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR CAA 90 bp GTCACCAACAGGAAGGTGAGATGCTGGATCTGCCAAAGAAGGTTGTaGGCTTCCCTGTGGACGGTCTTCATCAGAGTCCTCTTCCTCCTG +
Preference number: 2 (lower is better)
Translates to: VTNRKVRCWICQRRL*ASLWTVFIRVLFLL
Trigger: CAGGAGGAAGAGGACTCTGATGAAGACCGTCCACAGGGAAGCCAACAACCTTCTTTGGCAGATCCAGCATCTCACCTTCCTGTTGGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489341.5
3UTR CAA 90 bp GTGGTCACCAACAGGAAGGTGAGATGCTGGATCTGCCAAAGAAGGTaGTTGGCTTCCCTGTGGACGGTCTTCATCAGAGTCCTCTTCCTC +
Preference number: 2 (lower is better)
Translates to: VVTNRKVRCWICQRR*LASLWTVFIRVLFL
Trigger: GAGGAAGAGGACTCTGATGAAGACCGTCCACAGGGAAGCCAACAACCTTCTTTGGCAGATCCAGCATCTCACCTTCCTGTTGGTGACCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489341.5
ENST00000622363.4
3UTR-3UTR TCA 90 bp TTGTCAGCCCTAGTTTCTCGGAGATGGTCAAGAAGTACAGGCATGGTAGCCTCATCCCGCTCTCCGCTTTaGAGATGGACTTGGGCTTCC +
Preference number: 2 (lower is better)
Translates to: LSALVSRRWSRSTGMVASSRSPL*RWTWAS
Trigger: GGAAGCCCAAGTCCATCTTCAAAGCGGAGAGCGGGA...TGAGGCTACCATGCCTGTACTTCTTGACCATCTCCGAGAAACTAGGGCTGACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR-3UTR TCA 90 bp TGCTCACACAACAGGTTTCTAGGTGGACCTTTGGGAGCACTCCCTTGTTCTTCTTCCACAGCTGCAGCGTaGAGAACTCCGCGGCATCAT +
Preference number: 2 (lower is better)
Translates to: CSHNRFLGGPLGALPCSSSTAAA*RTPRHH
Trigger: ATGATGCCGCGGAGTTCTTCACGCTGCAGCTGTGGA...AGAAGAACAAGGGAGTGCTCCCAAAGGTCCACCTAGAAACCTGTTGTGTGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR-3UTR GCA 90 bp ACATTCTGCTGCTGCGGCTCCCAAGAGGGCGGCGCGTGCTCTTCTACCAGAGCCGGTGTTGACAAGATTTaGTTGATAATTCTGTATCGG +
Preference number: 2 (lower is better)
Translates to: TFCCCGSQEGGACSSTRAGVDKI*LIILYR
Trigger: CCGATACAGAATTATCAAGCAAATCTTGTCAACACC...GGCTCTGGTAGAAGAGCACGCGCCGCCCTCTTGGGAGCCGCAGCAGCAGAATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR-3UTR CCA 90 bp TTTCCGCTTGAGGCTCTGGATGTGCTTGGTGAGCTGGGTGATGGTCTGTGGCTCCCTCTGGTCTATTCTTaGTTGAAGTCGCACTGTTTC +
Preference number: 2 (lower is better)
Translates to: FPLEALDVLGELGDGLWLPLVYS*LKSHCF
Trigger: GAAACAGTGCGACTTCAACCAAGAATAGACCAGAGG...GAGCCACAGACCATCACCCAGCTCACCAAGCACATCCAGAGCCTCAAGCGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR CAA 90 bp GTCACCAACAGGAAGGTGAGATGCTGGATCTGCCAAAGAAGGTTGTaGGCTTCCCTGTGGACGGTCTTCATCAGAGTCCTCTTCCTCAAT +
Preference number: 2 (lower is better)
Translates to: VTNRKVRCWICQRRL*ASLWTVFIRVLFLN
Trigger: ATTGAGGAAGAGGACTCTGATGAAGACCGTCCACAGGGAAGCCAACAACCTTCTTTGGCAGATCCAGCATCTCACCTTCCTGTTGGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR-3UTR TCA 90 bp TGCCAAAGAAGGTTGTTGGCTTCCCTGTGGACGGTCTTCATCAGAGTCCTCTTCGGTTATCACCATCAGTaGTGTGATAGAGCAGCCTGC +
Preference number: 2 (lower is better)
Translates to: CQRRLLASLWTVFIRVLFGYHHQ*CDRAAC
Trigger: GCAGGCTGCTCTATCACATCACTGATGGTGATAACC...GAAGAGGACTCTGATGAAGACCGTCCACAGGGAAGCCAACAACCTTCTTTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR-3UTR GCA 90 bp TGCTCACACAACAGGTTTCTAGGTGGACCTTTGGGAGCACTCCCTTGTTCTTCTTTCTACCAGAGCCCCTaGGTCGGGGTAGTTCTCTTT +
Preference number: 2 (lower is better)
Translates to: CSHNRFLGGPLGALPCSSFYQSP*VGVVLF
Trigger: AAAGAGAACTACCCCGACGCAGGGGCTCTGGTAGAA...AGAAGAACAAGGGAGTGCTCCCAAAGGTCCACCTAGAAACCTGTTGTGTGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR-3UTR GCA 90 bp AATTCTCTTAAGGCTTTCCGCAGTCTCTTCTTGTCAGCCCTAGTTTCTCGGAGAGTCGCCTCTACATTCTaGTGCTGCGGCTCCCAAGAG +
Preference number: 2 (lower is better)
Translates to: NSLKAFRSLFLSALVSRRVASTF*CCGSQE
Trigger: CTCTTGGGAGCCGCAGCAGCAGAATGTAGAGGCGAC...TCTCCGAGAAACTAGGGCTGACAAGAAGAGACTGCGGAAAGCCTTAAGAGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR CAA 90 bp TTTTCTTCAAATTTCCGAATTTTCCGCTTGAGGCTCTGGATGTGCTaGGTGAGCTGGGTGATGGTCTGTGGCTCCTTGCCATCTCCACAG +
Preference number: 2 (lower is better)
Translates to: FSSNFRIFRLRLWMC*VSWVMVCGSLPSPQ
Trigger: CTGTGGAGATGGCAAGGAGCCACAGACCATCACCCAGCTCACCAAGCACATCCAGAGCCTCAAGCGGAAAATTCGGAAATTTGAAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR-3UTR GCA 90 bp CCGCAGCTTCCGGTTTCCCATTTTCTCTGGGGACTGTGGGTTGCTCACACAACATCCTCATTTAAGTCCTaGCGAGTTTCAAAAGCATCC +
Preference number: 2 (lower is better)
Translates to: PQLPVSHFLWGLWVAHTTSSFKS*RVSKAS
Trigger: GGATGCTTTTGAAACTCGGCAGGACTTAAATGAGGA...TGTTGTGTGAGCAACCCACAGTCCCCAGAGAAAATGGGAAACCGGAAGCTGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR-3UTR GCA 90 bp TTGTCAGCCCTAGTTTCTCGGAGATGGTCAAGAAGTACAGGCATGGTAGCCTCAAACAGGAAGGTGAGATaGTGGATCTGCCAAAGAAGG +
Preference number: 2 (lower is better)
Translates to: LSALVSRRWSRSTGMVASNRKVR*WICQRR
Trigger: CCTTCTTTGGCAGATCCAGCATCTCACCTTCCTGTT...TGAGGCTACCATGCCTGTACTTCTTGACCATCTCCGAGAAACTAGGGCTGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489341.5
ENST00000622363.4
3UTR-3UTR TCA 90 bp AATTCTCTTAAGGCTTTCCGCAGTCTCTTCTTGTCAGCCCTAGTTTCTCGGAGATCACCAACAGGAAGGTaGGATGCTGGATCTGCCAAA +
Preference number: 2 (lower is better)
Translates to: NSLKAFRSLFLSALVSRRSPTGR*DAGSAK
Trigger: TTTGGCAGATCCAGCATCTCACCTTCCTGTTGGTGA...TCTCCGAGAAACTAGGGCTGACAAGAAGAGACTGCGGAAAGCCTTAAGAGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489341.5
ENST00000622363.4
3UTR CAA 90 bp AATGGCAGTCCTCTGGTCTATTCTTGGTTGAAGTCGCACTGTTTCTaGGCACTTGAAGGCATTGTTTTGTGGACTCTCATGAGCTGGTGT +
Preference number: 2 (lower is better)
Translates to: NGSPLVYSWLKSHCF*ALEGIVLWTLMSWC
Trigger: ACACCAGCTCATGAGAGTCCACAAAACAATGCCTTCAAGTGCCAAGAAACAGTGCGACTTCAACCAAGAATAGACCAGAGGACTGCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR CAA 90 bp CAGCTTCTTCCTCATTTAAGTCCTGCCGAGTTTCAAAAGCATCCTTaGGCGAAATGGCAGTCCTCTGGTCTATTCTTGGTTGAAGTCGCA +
Preference number: 2 (lower is better)
Translates to: QLLPHLSPAEFQKHP*AKWQSSGLFLVEVA
Trigger: TGCGACTTCAACCAAGAATAGACCAGAGGACTGCCATTTCGCCAAAGGATGCTTTTGAAACTCGGCAGGACTTAAATGAGGAAGAAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR-3UTR GCA 90 bp GGATCTGCCAAAGAAGGTTGTTGGCTTCCCTGTGGACGGTCTTCATCAGAGTCCGGTGTTGACAAGATTTaGTTGATAATTCTGTATCGG +
Preference number: 2 (lower is better)
Translates to: GSAKEGCWLPCGRSSSESGVDKI*LIILYR
Trigger: CCGATACAGAATTATCAAGCAAATCTTGTCAACACC...GGACTCTGATGAAGACCGTCCACAGGGAAGCCAACAACCTTCTTTGGCAGATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489341.5
ENST00000622363.4
3UTR-3UTR CCA 90 bp ACTTCTTTCTTTTCATCTGGTAAAAGGGCCCTAACAGGCTCAGTCTCATTAGAGGCCAAAGAAGGTTGTTaGCTTCCCTGTGGACGGTCT +
Preference number: 2 (lower is better)
Translates to: TSFFSSGKRALTGSVSLEAKEGC*LPCGRS
Trigger: AGACCGTCCACAGGGAAGCCAACAACCTTCTTTGGC...CTCTAATGAGACTGAGCCTGTTAGGGCCCTTTTACCAGATGAAAAGAAAGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489341.5
ENST00000622363.4
3UTR-3UTR CCA 90 bp TGCCAAAGAAGGTTGTTGGCTTCCCTGTGGACGGTCTTCATCAGAGTCCTCTTCCATGGAGAGAGCTGGTaGTTTTACTTCTTTCTTTTC +
Preference number: 2 (lower is better)
Translates to: CQRRLLASLWTVFIRVLFHGESW*FYFFLF
Trigger: GAAAAGAAAGAAGTAAAACCACCAGCTCTCTCCATG...GAAGAGGACTCTGATGAAGACCGTCCACAGGGAAGCCAACAACCTTCTTTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489341.5
ENST00000622363.4
3UTR-3UTR TCA 90 bp AATTCTCTTAAGGCTTTCCGCAGTCTCTTCTTGTCAGCCCTAGTTTCTCGGAGAGAGTCCTCTTCCTCCTaGATTGTTGGAATAAGGGAA +
Preference number: 2 (lower is better)
Translates to: NSLKAFRSLFLSALVSRRESSSS*IVGIRE
Trigger: TTCCCTTATTCCAACAATTCAGGAGGAAGAGGACTC...TCTCCGAGAAACTAGGGCTGACAAGAAGAGACTGCGGAAAGCCTTAAGAGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489341.5
3UTR CAA 90 bp AAAAACTGTTCTTCAAATTCTCTTAAGGCTTTCCGCAGTCTCTTCTaGTCAGCCCTAGTTTCTCGGAGATGGTCAAGAAGTACAGGCATG +
Preference number: 2 (lower is better)
Translates to: KNCSSNSLKAFRSLF*SALVSRRWSRSTGM
Trigger: CATGCCTGTACTTCTTGACCATCTCCGAGAAACTAGGGCTGACAAGAAGAGACTGCGGAAAGCCTTAAGAGAATTTGAAGAACAGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000489341.5
ENST00000622363.4
3UTR-3UTR CCA 90 bp TCCTCAATTGTTGGAATAAGGGAAGGTGTTGACAAGATTTGCTTGATAATTCTGGCCAAAGAAGGTTGTTaGCTTCCCTGTGGACGGTCT +
Preference number: 2 (lower is better)
Translates to: SSIVGIREGVDKICLIILAKEGC*LPCGRS
Trigger: AGACCGTCCACAGGGAAGCCAACAACCTTCTTTGGC...CAGAATTATCAAGCAAATCTTGTCAACACCTTCCCTTATTCCAACAATTGAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR-3UTR CCA 90 bp TCCTCAATTGTTGGAATAAGGGAAGGTGTTGACAAGATTTGCTTGATAATTCTGGAAGATGGAGCATCGTaGCGACAGCAGTGGGTTATC +
Preference number: 2 (lower is better)
Translates to: SSIVGIREGVDKICLIILEDGAS*RQQWVI
Trigger: GATAACCCACTGCTGTCGCCACGATGCTCCATCTTC...CAGAATTATCAAGCAAATCTTGTCAACACCTTCCCTTATTCCAACAATTGAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR-3UTR TCA 90 bp GGAGTAACTTGTGGAACTAAGAAACCAACAACAAAGCAGTTATGTGGGCTAAAAAGCTACCATGTCCCATaGAACATCCCTAATACTGGC +
Preference number: 2 (lower is better)
Translates to: GVTCGTKKPTTKQLCGLKSYHVP*NIPNTG
Trigger: GCCAGTATTAGGGATGTTTCATGGGACATGGTAGCT...TTTTAGCCCACATAACTGCTTTGTTGTTGGTTTCTTAGTTCCACAAGTTACTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435852.6
3UTR CAA 90 bp TCATGGGTGAAAGTGATCATAACATTTCCTGAACCTCAAATAGTTTaGGCCACATCTTGCTTGCTGATGAGGACCTCTAATAGTCTCAGT +
Preference number: 2 (lower is better)
Translates to: SWVKVIITFPEPQIV*ATSCLLMRTSNSLS
Trigger: ACTGAGACTATTAGAGGTCCTCATCAGCAAGCAAGATGTGGCCAAAACTATTTGAGGTTCAGGAAATGTTATGATCACTTTCACCCATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR-3UTR CCA 90 bp TCTGCCATTGGTATCCTATCTTCCTTTTGTGGACTTCTTCCTGTTTGTTTAAAAAGGAAGGTGAGATGCTaGATCTGCCAAAGAAGGTTG +
Preference number: 2 (lower is better)
Translates to: SAIGILSSFCGLLPVCLKRKVRC*ICQRRL
Trigger: CAACCTTCTTTGGCAGATCCAGCATCTCACCTTCCT...TTTTAAACAAACAGGAAGAAGTCCACAAAAGGAAGATAGGATACCAATGGCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000489341.5
ENST00000622363.4
3UTR-3UTR CCA 90 bp ACTCTGTTTAGAATCGGCTGTAACATTCGGCTCAAAAATTGTAGAACATTAAAGCTGGAGCAATCAGTCTaGTCTTCATGTAGAGAGACT +
Preference number: 2 (lower is better)
Translates to: TLFRIGCNIRLKNCRTLKLEQSV*SSCRET
Trigger: AGTCTCTCTACATGAAGACCAGACTGATTGCTCCAG...CTTTAATGTTCTACAATTTTTGAGCCGAATGTTACAGCCGATTCTAAACAGAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000619059.4
3UTR-3UTR TCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCATTTATTTTAGGGTACTaGGAGCCTAGCAGACTTAAA +
Preference number: 2 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSFILGY*EPSRLK
Trigger: TTTAAGTCTGCTAGGCTCTCAGTACCCTAAAATAAA...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
3UTR-3UTR TCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCAAACAAGGTTGGTACATaGGAGAAAATGTTGACCTTT +
Preference number: 2 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSNKVGT*EKMLTF
Trigger: AAAGGTCAACATTTTCTCTCATGTACCAACCTTGTT...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
3UTR-3UTR GCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCAATACTACCACTAAAGTaGTTCCATTTTCATTGTGTC +
Preference number: 2 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSILPLK*FHFHCV
Trigger: GACACAATGAAAATGGAAGCACTTTAGTGGTAGTAT...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
3UTR GCA 72 bp CTGTCCACCAGCACGGTCGCCTCTACATTCTGCTGCTaGGGCTCCCAAGAGGGCGGCGCGTGCTCTTCTACC +
Preference number: 3 (lower is better)
Translates to: LSTSTVASTFCC*GSQEGGACSST
Trigger: GGTAGAAGAGCACGCGCCGCCCTCTTGGGAGCCGCAGCAGCAGAATGTAGAGGCGACCGTGCTGGTGGACAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619059.4
ENST00000622363.4
3UTR GCA 72 bp ACGCTGTCCACCAGCACGGTCGCCTCTACATTCTGCTaGTGCGGCTCCCAAGAGGGCGGCGCGTGCTCTTCT +
Preference number: 3 (lower is better)
Translates to: TLSTSTVASTFC*CGSQEGGACSS
Trigger: AGAAGAGCACGCGCCGCCCTCTTGGGAGCCGCAGCAGCAGAATGTAGAGGCGACCGTGCTGGTGGACAGCGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619059.4
ENST00000622363.4
3UTR GCA 72 bp AATACGCTGTCCACCAGCACGGTCGCCTCTACATTCTaGTGCTGCGGCTCCCAAGAGGGCGGCGCGTGCTCT +
Preference number: 3 (lower is better)
Translates to: NTLSTSTVASTF*CCGSQEGGACS
Trigger: AGAGCACGCGCCGCCCTCTTGGGAGCCGCAGCAGCAGAATGTAGAGGCGACCGTGCTGGTGGACAGCGTATT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619059.4
ENST00000622363.4
3UTR CCA 72 bp GGGTCTGCAGAATCTGTCCCATCGGCAAGCACGCTCTaGGTTGATGCTGGCGCCGGGTCCTTGACTCCATGC +
Preference number: 3 (lower is better)
Translates to: GSAESVPSASTL*VDAGAGSLTPC
Trigger: GCATGGAGTCAAGGACCCGGCGCCAGCATCAACCCAGAGCGTGCTTGCCGATGGGACAGATTCTGCAGACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR-3UTR CAA 90 bp GTCCCATCGGCAAGCACGCTCTGGGTTGATGCTGGCGCCGGGTCCTTGACTCCATTGGGCTTCCTGGACTaGAAGTTGCCCATGCTGGGT +
Preference number: 3 (lower is better)
Translates to: VPSASTLWVDAGAGSLTPLGFLD*KLPMLG
Trigger: ACCCAGCATGGGCAACTTCAAGTCCAGGAAGCCCAA...TGGAGTCAAGGACCCGGCGCCAGCATCAACCCAGAGCGTGCTTGCCGATGGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR TCA 72 bp TGCAGAATCTGTCCCATCGGCAAGCACGCTCTGGGTTaGTGCTGGCGCCGGGTCCTTGACTCCATGCACCTG +
Preference number: 3 (lower is better)
Translates to: CRICPIGKHALG*CWRRVLDSMHL
Trigger: CAGGTGCATGGAGTCAAGGACCCGGCGCCAGCATCAACCCAGAGCGTGCTTGCCGATGGGACAGATTCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR TCA 72 bp CTGCAGCGTGAAGAACTCCGCGGCATCATAAACTGCTaGGTGCTGGGTGGAGATGGGGCTGACTCGGGGTCT +
Preference number: 3 (lower is better)
Translates to: LQREELRGIINC*VLGGDGADSGS
Trigger: AGACCCCGAGTCAGCCCCATCTCCACCCAGCACTCAGCAGTTTATGATGCCGCGGAGTTCTTCACGCTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR CCA 72 bp CAAGGCAGCATCTGGAGTCTCTTCTCCAGAGGAGCTTaGCTCCGGGCCCGCAGCTTCCGGTTTCCCATTTTC +
Preference number: 3 (lower is better)
Translates to: QGSIWSLFSRGA*LRARSFRFPIF
Trigger: GAAAATGGGAAACCGGAAGCTGCGGGCCCGGAGCCAAGCTCCTCTGGAGAAGAGACTCCAGATGCTGCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR CCA 72 bp GGGGCTGACTCGGGGTCTAAGTTGAATCTCTGGCTTTaGCTGAAGATGGAGCATCGTGGCGACAGCAGTGGG +
Preference number: 3 (lower is better)
Translates to: GADSGSKLNLWL*LKMEHRGDSSG
Trigger: CCCACTGCTGTCGCCACGATGCTCCATCTTCAGCCAAAGCCAGAGATTCAACTTAGACCCCGAGTCAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR TCA 72 bp CAAGCACGCTCTGGGTTGATGCTGGCGCCGGGTCCTTaGCTCCATGCACCTGAGCAGCTTCTTCCTCATTTA +
Preference number: 3 (lower is better)
Translates to: QARSGLMLAPGP*LHAPEQLLPHL
Trigger: TAAATGAGGAAGAAGCTGCTCAGGTGCATGGAGTCAAGGACCCGGCGCCAGCATCAACCCAGAGCGTGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR GCA 72 bp GAGTGGAGGTCTTCTGGTGCACTGTCGGCCTCATTCTaGCCATCTTTGTGGACTGGTGAGGGGTCTGCAGAA +
Preference number: 3 (lower is better)
Translates to: EWRSSGALSASF*PSLWTGEGSAE
Trigger: TTCTGCAGACCCCTCACCAGTCCACAAAGATGGGCAGAATGAGGCCGACAGTGCACCAGAAGACCTCCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR CCA 72 bp GGAGATGGGGCTGACTCGGGGTCTAAGTTGAATCTCTaGCTTTGGCTGAAGATGGAGCATCGTGGCGACAGC +
Preference number: 3 (lower is better)
Translates to: GDGADSGSKLNL*LWLKMEHRGDS
Trigger: GCTGTCGCCACGATGCTCCATCTTCAGCCAAAGCCAGAGATTCAACTTAGACCCCGAGTCAGCCCCATCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR-3UTR CAA 90 bp TTTCCGCTTGAGGCTCTGGATGTGCTTGGTGAGCTGGGTGATGGTCTGTGGCTCATCTGCCAAAGAAGGTaGTTGGCTTCCCTGTGGACG +
Preference number: 3 (lower is better)
Translates to: FPLEALDVLGELGDGLWLICQRR*LASLWT
Trigger: CGTCCACAGGGAAGCCAACAACCTTCTTTGGCAGAT...GAGCCACAGACCATCACCCAGCTCACCAAGCACATCCAGAGCCTCAAGCGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR TCA 72 bp GTTGATGCTGGCGCCGGGTCCTTGACTCCATGCACCTaGGCAGCTTCTTCCTCATTTAAGTCCTGCCGAGTT +
Preference number: 3 (lower is better)
Translates to: VDAGAGSLTPCT*AASSSFKSCRV
Trigger: AACTCGGCAGGACTTAAATGAGGAAGAAGCTGCTCAGGTGCATGGAGTCAAGGACCCGGCGCCAGCATCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR TCA 72 bp AGCATCGTGGCGACAGCAGTGGGTTATCACCATCAGTaGTGTGATAGAGCAGCCTGCTGGTCCCCACAGAGT +
Preference number: 3 (lower is better)
Translates to: SIVATAVGYHHQ*CDRAACWSPQS
Trigger: ACTCTGTGGGGACCAGCAGGCTGCTCTATCACATCACTGATGGTGATAACCCACTGCTGTCGCCACGATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR GCA 72 bp GAGGTGGTCACCAACAGGAAGGTGAGATGCTGGATCTaGCAAAGAAGGTTGTTGGCTTCCCTGTGGACGGTC +
Preference number: 3 (lower is better)
Translates to: EVVTNRKVRCWI*QRRLLASLWTV
Trigger: GACCGTCCACAGGGAAGCCAACAACCTTCTTTGGCAGATCCAGCATCTCACCTTCCTGTTGGTGACCACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489341.5
ENST00000622363.4
3UTR CCA 72 bp ATTTTCCGCTTGAGGCTCTGGATGTGCTTGGTGAGCTaGGTGATGGTCTGTGGCTCCTTGCCATCTCCACAG +
Preference number: 3 (lower is better)
Translates to: IFRLRLWMCLVS*VMVCGSLPSPQ
Trigger: CTGTGGAGATGGCAAGGAGCCACAGACCATCACCCAGCTCACCAAGCACATCCAGAGCCTCAAGCGGAAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR-3UTR CAA 90 bp GGAAGTTGCTCTCTTCTCTCCTTCAGGCATGTCAAGGCAGCATCTGGAGTCTCTAGGCTCTGGATGTGCTaGGTGAGCTGGGTGATGGTC +
Preference number: 3 (lower is better)
Translates to: GSCSLLSFRHVKAASGVSRLWMC*VSWVMV
Trigger: GACCATCACCCAGCTCACCAAGCACATCCAGAGCCT...AGAGACTCCAGATGCTGCCTTGACATGCCTGAAGGAGAGAAGAGAGCAACTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR TCA 72 bp CTCATGAGCTGGTGTTCCTGCTCTCACCTGACACTCTaGCTGGCTGGATACCACATGCTCTGTCTCCTGACT +
Preference number: 3 (lower is better)
Translates to: LMSWCSCSHLTL*LAGYHMLCLLT
Trigger: AGTCAGGAGACAGAGCATGTGGTATCCAGCCAGTCAGAGTGTCAGGTGAGAGCAGGAACACCAGCTCATGAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR CCA 72 bp GTAGGTGAGGTGGTCACCAACAGGAAGGTGAGATGCTaGATCTGCCAAAGAAGGTTGTTGGCTTCCCTGTGG +
Preference number: 3 (lower is better)
Translates to: VGEVVTNRKVRC*ICQRRLLASLW
Trigger: CCACAGGGAAGCCAACAACCTTCTTTGGCAGATCCAGCATCTCACCTTCCTGTTGGTGACCACCTCACCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489341.5
ENST00000622363.4
3UTR GCA 72 bp GCTTCCGGTTTCCCATTTTCTCTGGGGACTGTGGGTTaGTCACACAACAGGTTTCTAGGTGGACCTTTGGGA +
Preference number: 3 (lower is better)
Translates to: ASGFPFSLGTVG*SHNRFLGGPLG
Trigger: TCCCAAAGGTCCACCTAGAAACCTGTTGTGTGAGCAACCCACAGTCCCCAGAGAAAATGGGAAACCGGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR CCA 72 bp GCTTTGGCTGAAGATGGAGCATCGTGGCGACAGCAGTaGGTTATCACCATCAGTGATGTGATAGAGCAGCCT +
Preference number: 3 (lower is better)
Translates to: ALAEDGASWRQQ*VITISDVIEQP
Trigger: AGGCTGCTCTATCACATCACTGATGGTGATAACCCACTGCTGTCGCCACGATGCTCCATCTTCAGCCAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR-3UTR CAA 90 bp TGCCAAAGAAGGTTGTTGGCTTCCCTGTGGACGGTCTTCATCAGAGTCCTCTTCTTCCGCAGTCTCTTCTaGTCAGCCCTAGTTTCTCGG +
Preference number: 3 (lower is better)
Translates to: CQRRLLASLWTVFIRVLFFRSLF*SALVSR
Trigger: CCGAGAAACTAGGGCTGACAAGAAGAGACTGCGGAA...GAAGAGGACTCTGATGAAGACCGTCCACAGGGAAGCCAACAACCTTCTTTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489341.5
ENST00000622363.4
3UTR-3UTR CAA 90 bp CGGGCCCGCAGCTTCCGGTTTCCCATTTTCTCTGGGGACTGTGGGTTGCTCACAGTTGACAAGATTTGCTaGATAATTCTGTATCGGTCA +
Preference number: 3 (lower is better)
Translates to: RARSFRFPIFSGDCGLLTVDKIC*IILYRS
Trigger: TGACCGATACAGAATTATCAAGCAAATCTTGTCAAC...TGTGAGCAACCCACAGTCCCCAGAGAAAATGGGAAACCGGAAGCTGCGGGCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR GCA 72 bp TCAAATTTCCGAATTTTCCGCTTGAGGCTCTGGATGTaGTTGGTGAGCTGGGTGATGGTCTGTGGCTCCTTG +
Preference number: 3 (lower is better)
Translates to: SNFRIFRLRLWM*LVSWVMVCGSL
Trigger: CAAGGAGCCACAGACCATCACCCAGCTCACCAAGCACATCCAGAGCCTCAAGCGGAAAATTCGGAAATTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR CCA 72 bp GTTGAATCTCTGGCTTTGGCTGAAGATGGAGCATCGTaGCGACAGCAGTGGGTTATCACCATCAGTGATGTG +
Preference number: 3 (lower is better)
Translates to: VESLALAEDGAS*RQQWVITISDV
Trigger: CACATCACTGATGGTGATAACCCACTGCTGTCGCCACGATGCTCCATCTTCAGCCAAAGCCAGAGATTCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR CCA 72 bp AGTCCTGCCGAGTTTCAAAAGCATCCTTTGGCGAAATaGCAGTCCTCTGGTCTATTCTTGGTTGAAGTCGCA +
Preference number: 3 (lower is better)
Translates to: SPAEFQKHPLAK*QSSGLFLVEVA
Trigger: TGCGACTTCAACCAAGAATAGACCAGAGGACTGCCATTTCGCCAAAGGATGCTTTTGAAACTCGGCAGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR CCA 72 bp TTTTCTTCAAATTTCCGAATTTTCCGCTTGAGGCTCTaGATGTGCTTGGTGAGCTGGGTGATGGTCTGTGGC +
Preference number: 3 (lower is better)
Translates to: FSSNFRIFRLRL*MCLVSWVMVCG
Trigger: GCCACAGACCATCACCCAGCTCACCAAGCACATCCAGAGCCTCAAGCGGAAAATTCGGAAATTTGAAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR-3UTR CAA 90 bp GGATCTGCCAAAGAAGGTTGTTGGCTTCCCTGTGGACGGTCTTCATCAGAGTCCGTTGACAAGATTTGCTaGATAATTCTGTATCGGTCA +
Preference number: 3 (lower is better)
Translates to: GSAKEGCWLPCGRSSSESVDKIC*IILYRS
Trigger: TGACCGATACAGAATTATCAAGCAAATCTTGTCAAC...GGACTCTGATGAAGACCGTCCACAGGGAAGCCAACAACCTTCTTTGGCAGATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489341.5
ENST00000622363.4
3UTR TCA 72 bp CTATTCTTGGTTGAAGTCGCACTGTTTCTTGGCACTTaGAGGCATTGTTTTGTGGACTCTCATGAGCTGGTG +
Preference number: 3 (lower is better)
Translates to: LFLVEVALFLGT*RHCFVDSHELV
Trigger: CACCAGCTCATGAGAGTCCACAAAACAATGCCTTCAAGTGCCAAGAAACAGTGCGACTTCAACCAAGAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR GCA 72 bp ACATTTCCTGAACCTCAAATAGTTTTGGCCACATCTTaGTTGCTGATGAGGACCTCTAATAGTCTCAGTTTG +
Preference number: 3 (lower is better)
Translates to: TFPEPQIVLATS*LLMRTSNSLSL
Trigger: CAAACTGAGACTATTAGAGGTCCTCATCAGCAAGCAAGATGTGGCCAAAACTATTTGAGGTTCAGGAAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR GCA 72 bp TATTACATGGGGCCAAACAATGACAGAGATACAGGGTaGTTTATTTCAAAAGGGAGTTACAGTCTAAGCAGA +
Preference number: 3 (lower is better)
Translates to: YYMGPNNDRDTG*FISKGSYSLSR
Trigger: TCTGCTTAGACTGTAACTCCCTTTTGAAATAAAGCACCCTGTATCTCTGTCATTGTTTGGCCCCATGTAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468696.1
3UTR TCA 72 bp CTCTTCCTCCTGAATTGTTGGAATAAGGGAAGGTGTTaGCAAGATTTGCTTGATAATTCTGTATCGGTCATA +
Preference number: 3 (lower is better)
Translates to: LFLLNCWNKGRC*QDLLDNSVSVI
Trigger: TATGACCGATACAGAATTATCAAGCAAATCTTGTCAACACCTTCCCTTATTCCAACAATTCAGGAGGAAGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489341.5
3UTR TCA 72 bp GTCCTCTTCCTCAATTGTTGGAATAAGGGAAGGTGTTaGCAAGATTTGCTTGATAATTCTGTATCGGTCATA +
Preference number: 3 (lower is better)
Translates to: VLFLNCWNKGRC*QDLLDNSVSVI
Trigger: TATGACCGATACAGAATTATCAAGCAAATCTTGTCAACACCTTCCCTTATTCCAACAATTGAGGAAGAGGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR CCA 72 bp AACATCCCTAATACTGGCACTATTAGAATGTTGCATTaGACAAATCCTGAGTCTAAGCCAGTGTGGAAATTA +
Preference number: 3 (lower is better)
Translates to: NIPNTGTIRMLH*TNPESKPVWKL
Trigger: TAATTTCCACACTGGCTTAGACTCAGGATTTGTCCAATGCAACATTCTAATAGTGCCAGTATTAGGGATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435852.6
3UTR TCA 72 bp CTTTATATCATGGGTGAAAGTGATCATAACATTTCCTaGACCTCAAATAGTTTTGGCCACATCTTGCTTGCT +
Preference number: 3 (lower is better)
Translates to: LYIMGESDHNIS*TSNSFGHILLA
Trigger: AGCAAGCAAGATGTGGCCAAAACTATTTGAGGTTCAGGAAATGTTATGATCACTTTCACCCATGATATAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR-3UTR CAA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCATATCCTATCTTCCTTTaGTGGACTTCTTCCTGTTTG +
Preference number: 3 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSYPIFL*WTSSCL
Trigger: CAAACAGGAAGAAGTCCACAAAAGGAAGATAGGATA...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR-3UTR CAA 90 bp TCCTCAATTGTTGGAATAAGGGAAGGTGTTGACAAGATTTGCTTGATAATTCTGAATACTCATCTGCCATaGGTATCCTATCTTCCTTTT +
Preference number: 3 (lower is better)
Translates to: SSIVGIREGVDKICLIILNTHLP*VSYLPF
Trigger: AAAAGGAAGATAGGATACCAATGGCAGATGAGTATT...CAGAATTATCAAGCAAATCTTGTCAACACCTTCCCTTATTCCAACAATTGAGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR GCA 90 bp GCTGCTGCGGCTCCCAAGAGGGCGGCGCGTGCTCTTCTACCAGAGCCCCTGCGTGTCGCCTCTACATTCTaGTGCTGCGGCTCCCAAGAG +
Preference number: 4 (lower is better)
Translates to: AAAAPKRAARALLPEPLRVASTF*CCGSQE
Trigger: CTCTTGGGAGCCGCAGCAGCAGAATGTAGAGGCGAC...ACGCAGGGGCTCTGGTAGAAGAGCACGCGCCGCCCTCTTGGGAGCCGCAGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619059.4
ENST00000622363.4
CDS-3UTR TCA 90 bp CACCAGCACGGTCGCCTCTACATTCTGCTGCTGCGGCTCCCAAGAGGGCGGCGCTGGGCTTCCTGGACTTaGAGTTGCCCATGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: HQHGRLYILLLRLPRGRRWASWT*SCPCWV
Trigger: GACCCAGCATGGGCAACTTCAAGTCCAGGAAGCCCA...GCGCCGCCCTCTTGGGAGCCGCAGCAGCAGAATGTAGAGGCGACCGTGCTGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619059.4
ENST00000622363.4
CDS-3UTR TCA 90 bp GCTCCCAAGAGGGCGGCGCGTGCTCTTCTACCAGAGCCCCTGCGTCGGGGTAGTTCCCGCTCTCCGCTTTaGAGATGGACTTGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: APKRAARALLPEPLRRGSSRSPL*RWTWAS
Trigger: GGAAGCCCAAGTCCATCTTCAAAGCGGAGAGCGGGA...ACTACCCCGACGCAGGGGCTCTGGTAGAAGAGCACGCGCCGCCCTCTTGGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619059.4
ENST00000622363.4
CDS-3UTR GCA 90 bp ACATTCTGCTGCTGCGGCTCCCAAGAGGGCGGCGCGTGCTCTTCTACCAGAGCCCAAGAGGGCGGCGCGTaGTCTTCTACCAGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: TFCCCGSQEGGACSSTRAQEGGA*SSTRAP
Trigger: AGGGGCTCTGGTAGAAGAGCACGCGCCGCCCTCTTG...GGCTCTGGTAGAAGAGCACGCGCCGCCCTCTTGGGAGCCGCAGCAGCAGAATGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619059.4
ENST00000622363.4
CDS-3UTR GCA 90 bp GCTGCTGCGGCTCCCAAGAGGGCGGCGCGTGCTCTTCTACCAGAGCCCCTGCGTAGCCGTCTCCCTGATTaGTCTCCGGGAGTTAGAGCA +
Preference number: 4 (lower is better)
Translates to: AAAAPKRAARALLPEPLRSRLPD*SPGVRA
Trigger: TGCTCTAACTCCCGGAGAGCAATCAGGGAGACGGCT...ACGCAGGGGCTCTGGTAGAAGAGCACGCGCCGCCCTCTTGGGAGCCGCAGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619059.4
ENST00000622363.4
CDS-3UTR GCA 90 bp TACATTCTGCTGCTGCGGCTCCCAAGAGGGCGGCGCGTGCTCTTCTACCAGAGCCAAGAGGGCGGCGCGTaGTCTTCTACCAGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: YILLLRLPRGRRVLFYQSQEGGA*SSTRAP
Trigger: AGGGGCTCTGGTAGAAGAGCACGCGCCGCCCTCTTG...GCTCTGGTAGAAGAGCACGCGCCGCCCTCTTGGGAGCCGCAGCAGCAGAATGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619059.4
ENST00000622363.4
CDS-3UTR GCA 90 bp AGCACGGTCGCCTCTACATTCTGCTGCTGCGGCTCCCAAGAGGGCGGCGCGTGCGCCTCATCTTCGGCCTaGAGATGCACACTTTGGCAC +
Preference number: 4 (lower is better)
Translates to: STVASTFCCCGSQEGGACASSSA*RCTLWH
Trigger: GTGCCAAAGTGTGCATCTGCAGGCCGAAGATGAGGC...GCACGCGCCGCCCTCTTGGGAGCCGCAGCAGCAGAATGTAGAGGCGACCGTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619059.4
ENST00000622363.4
CDS-3UTR GCA 90 bp CACCAGCACGGTCGCCTCTACATTCTGCTGCTGCGGCTCCCAAGAGGGCGGCGCTCTTCGGCCTGCAGATaGACACTTTGGCACACCTCT +
Preference number: 4 (lower is better)
Translates to: HQHGRLYILLLRLPRGRRSSACR*TLWHTS
Trigger: AGAGGTGTGCCAAAGTGTGCATCTGCAGGCCGAAGA...GCGCCGCCCTCTTGGGAGCCGCAGCAGCAGAATGTAGAGGCGACCGTGCTGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619059.4
ENST00000622363.4
CDS-3UTR CCA 90 bp ACCAGCACGGTCGCCTCTACATTCTGCTGCTGCGGCTCCCAAGAGGGCGGCGCGGAAGATGGAGCATCGTaGCGACAGCAGTGGGTTATC +
Preference number: 4 (lower is better)
Translates to: TSTVASTFCCCGSQEGGAEDGAS*RQQWVI
Trigger: GATAACCCACTGCTGTCGCCACGATGCTCCATCTTC...CGCGCCGCCCTCTTGGGAGCCGCAGCAGCAGAATGTAGAGGCGACCGTGCTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR CCA 90 bp GTCCCATCGGCAAGCACGCTCTGGGTTGATGCTGGCGCCGGGTCCTTGACTCCATCACACCTGTGCACCTaGAGCAGGAAGTCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: VPSASTLWVDAGAGSLTPSHLCT*SRKSRP
Trigger: AGGCCTGGACTTCCTGCTCCAGGTGCACAGGTGTGA...TGGAGTCAAGGACCCGGCGCCAGCATCAACCCAGAGCGTGCTTGCCGATGGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR TCA 90 bp TTGGGCTTCCTGGACTTGAAGTTGCCCATGCTGGGTCGCAATACGCTGTCCACCCTGGCGCCGGGTCCTTaGCTCCATGCACCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: LGFLDLKLPMLGRNTLSTLAPGP*LHAPEQ
Trigger: CTGCTCAGGTGCATGGAGTCAAGGACCCGGCGCCAG...GGTGGACAGCGTATTGCGACCCAGCATGGGCAACTTCAAGTCCAGGAAGCCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR CCA 90 bp GCTCCCAAGAGGGCGGCGCGTGCTCTTCTACCAGAGCCCCTGCGTCGGGGTAGTTTGTTGGCTTCCCTGTaGACGGTCTTCATCAGAGTC +
Preference number: 4 (lower is better)
Translates to: APKRAARALLPEPLRRGSLLASL*TVFIRV
Trigger: GACTCTGATGAAGACCGTCCACAGGGAAGCCAACAA...ACTACCCCGACGCAGGGGCTCTGGTAGAAGAGCACGCGCCGCCCTCTTGGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR TCA 90 bp AGCACGGTCGCCTCTACATTCTGCTGCTGCGGCTCCCAAGAGGGCGGCGCGTGCTTACAGTGGTGCTGCTaGAGGAATTATCCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: STVASTFCCCGSQEGGACLQWCC*RNYPEG
Trigger: GCCTTCAGGATAATTCCTTCAGCAGCACCACTGTAA...GCACGCGCCGCCCTCTTGGGAGCCGCAGCAGCAGAATGTAGAGGCGACCGTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619059.4
ENST00000622363.4
CDS-3UTR TCA 90 bp TTTCCGCTTGAGGCTCTGGATGTGCTTGGTGAGCTGGGTGATGGTCTGTGGCTCAAGCACGCTCTGGGTTaGTGCTGGCGCCGGGTCCTT +
Preference number: 4 (lower is better)
Translates to: FPLEALDVLGELGDGLWLKHALG*CWRRVL
Trigger: AAGGACCCGGCGCCAGCATCAACCCAGAGCGTGCTT...GAGCCACAGACCATCACCCAGCTCACCAAGCACATCCAGAGCCTCAAGCGGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR GCA 90 bp ACCAGCACGGTCGCCTCTACATTCTGCTGCTGCGGCTCCCAAGAGGGCGGCGCGGTTTTGGCCACATCTTaGTTGCTGATGAGGACCTCT +
Preference number: 4 (lower is better)
Translates to: TSTVASTFCCCGSQEGGAVLATS*LLMRTS
Trigger: AGAGGTCCTCATCAGCAAGCAAGATGTGGCCAAAAC...CGCGCCGCCCTCTTGGGAGCCGCAGCAGCAGAATGTAGAGGCGACCGTGCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR GCA 90 bp AGAGGGCGGCGCGTGCTCTTCTACCAGAGCCCCTGCGTCGGGGTAGTTCTCTTTTCTTCGTCACACCTGTaGACCTGGAGCAGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: RGRRVLFYQSPCVGVVLFSSSHL*TWSRKS
Trigger: GGACTTCCTGCTCCAGGTGCACAGGTGTGACGAAGA...AAAGAGAACTACCCCGACGCAGGGGCTCTGGTAGAAGAGCACGCGCCGCCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000619059.4
ENST00000622363.4
CDS-3UTR GCA 90 bp AGAGGGCGGCGCGTGCTCTTCTACCAGAGCCCCTGCGTCGGGGTAGTTCTCTTTAGCCGTCTCCCTGATTaGTCTCCGGGAGTTAGAGCA +
Preference number: 4 (lower is better)
Translates to: RGRRVLFYQSPCVGVVLFSRLPD*SPGVRA
Trigger: TGCTCTAACTCCCGGAGAGCAATCAGGGAGACGGCT...AAAGAGAACTACCCCGACGCAGGGGCTCTGGTAGAAGAGCACGCGCCGCCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619059.4
ENST00000622363.4
CDS-3UTR GCA 90 bp ACGGTCGCCTCTACATTCTGCTGCTGCGGCTCCCAAGAGGGCGGCGCGTGCTCTTGGCTGGATACCACATaGTCTGTCTCCTTTGCCCAT +
Preference number: 4 (lower is better)
Translates to: TVASTFCCCGSQEGGACSWLDTT*SVSFAH
Trigger: ATGGGCAAAGGAGACAGAGCATGTGGTATCCAGCCA...AGAGCACGCGCCGCCCTCTTGGGAGCCGCAGCAGCAGAATGTAGAGGCGACCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619059.4
CDS-3UTR CCA 90 bp CGGGCCCGCAGCTTCCGGTTTCCCATTTTCTCTGGGGACTGTGGGTTGCTCACACTGGTCCCCACAGAGTaGAGGTCTTCTGGTGCACTG +
Preference number: 4 (lower is better)
Translates to: RARSFRFPIFSGDCGLLTLVPTE*RSSGAL
Trigger: CAGTGCACCAGAAGACCTCCACTCTGTGGGGACCAG...TGTGAGCAACCCACAGTCCCCAGAGAAAATGGGAAACCGGAAGCTGCGGGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR CCA 90 bp CATGCTGGGTCGCAATACGCTGTCCACCAGCACGGTCGCCTCTACATTCTGCTGAACATCAGCCAAGTCTaGCCGGGGAGCCGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: HAGSQYAVHQHGRLYILLNISQV*PGSRLP
Trigger: AGGGAGACGGCTCCCCGGCCAGACTTGGCTGATGTT...CAGCAGAATGTAGAGGCGACCGTGCTGGTGGACAGCGTATTGCGACCCAGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619059.4
ENST00000622363.4
CDS-3UTR CCA 90 bp AGCACGGTCGCCTCTACATTCTGCTGCTGCGGCTCCCAAGAGGGCGGCGCGTGCAGGAAGGTGAGATGCTaGATCTGCCAAAGAAGGTTG +
Preference number: 4 (lower is better)
Translates to: STVASTFCCCGSQEGGACRKVRC*ICQRRL
Trigger: CAACCTTCTTTGGCAGATCCAGCATCTCACCTTCCT...GCACGCGCCGCCCTCTTGGGAGCCGCAGCAGCAGAATGTAGAGGCGACCGTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR CAA 72 bp CCGTGGCTCCTCCCGCTCTCCGCTTTGAAGATGGACTaGGGCTTCCTGGACTTGAAGTTGCCCATGCTGGGT +
Preference number: 4 (lower is better)
Translates to: PWLLPLSALKMD*GFLDLKLPMLG
Trigger: ACCCAGCATGGGCAACTTCAAGTCCAGGAAGCCCAAGTCCATCTTCAAAGCGGAGAGCGGGAGGAGCCACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619059.4
ENST00000622363.4
CDS-3UTR TCA 90 bp AGAAGGTTGTTGGCTTCCCTGTGGACGGTCTTCATCAGAGTCCTCTTCCTCCTGCTGGCGCCGGGTCCTTaGCTCCATGCACCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: RRLLASLWTVFIRVLFLLLAPGP*LHAPEQ
Trigger: CTGCTCAGGTGCATGGAGTCAAGGACCCGGCGCCAG...CAGGAGGAAGAGGACTCTGATGAAGACCGTCCACAGGGAAGCCAACAACCTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489341.5
CDS-3UTR TCA 90 bp GCTCTGGATGTGCTTGGTGAGCTGGGTGATGGTCTGTGGCTCCTTGCCATCTCCTCCACAGCTGCAGCGTaGAGAACTCCGCGGCATCAT +
Preference number: 4 (lower is better)
Translates to: ALDVLGELGDGLWLLAISSTAAA*RTPRHH
Trigger: ATGATGCCGCGGAGTTCTTCACGCTGCAGCTGTGGA...GGAGATGGCAAGGAGCCACAGACCATCACCCAGCTCACCAAGCACATCCAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR GCA 90 bp CTTCCTGGACTTGAAGTTGCCCATGCTGGGTCGCAATACGCTGTCCACCAGCACTCTACATTCTGCTGCTaGGGCTCCCAAGAGGGCGGC +
Preference number: 4 (lower is better)
Translates to: LPGLEVAHAGSQYAVHQHSTFCC*GSQEGG
Trigger: GCCGCCCTCTTGGGAGCCGCAGCAGCAGAATGTAGA...GTGCTGGTGGACAGCGTATTGCGACCCAGCATGGGCAACTTCAAGTCCAGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619059.4
ENST00000622363.4
CDS-3UTR GCA 90 bp ACATTCTGCTGCTGCGGCTCCCAAGAGGGCGGCGCGTGCTCTTCTACCAGAGCCCTGGGGACTGTGGGTTaGTCACACAACAGGTTTCTA +
Preference number: 4 (lower is better)
Translates to: TFCCCGSQEGGACSSTRALGTVG*SHNRFL
Trigger: TAGAAACCTGTTGTGTGAGCAACCCACAGTCCCCAG...GGCTCTGGTAGAAGAGCACGCGCCGCCCTCTTGGGAGCCGCAGCAGCAGAATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR GCA 90 bp TACATTCTGCTGCTGCGGCTCCCAAGAGGGCGGCGCGTGCTCTTCTACCAGAGCTCTTCGGCCTGCAGATaGACACTTTGGCACACCTCT +
Preference number: 4 (lower is better)
Translates to: YILLLRLPRGRRVLFYQSSSACR*TLWHTS
Trigger: AGAGGTGTGCCAAAGTGTGCATCTGCAGGCCGAAGA...GCTCTGGTAGAAGAGCACGCGCCGCCCTCTTGGGAGCCGCAGCAGCAGAATGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619059.4
ENST00000622363.4
CDS-3UTR CCA 90 bp AGCACGGTCGCCTCTACATTCTGCTGCTGCGGCTCCCAAGAGGGCGGCGCGTGCCTGGAGCAATCAGTCTaGTCTTCATGTAGAGAGACT +
Preference number: 4 (lower is better)
Translates to: STVASTFCCCGSQEGGACLEQSV*SSCRET
Trigger: AGTCTCTCTACATGAAGACCAGACTGATTGCTCCAG...GCACGCGCCGCCCTCTTGGGAGCCGCAGCAGCAGAATGTAGAGGCGACCGTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619059.4
ENST00000622363.4
CDS-3UTR CCA 90 bp AGAGGGCGGCGCGTGCTCTTCTACCAGAGCCCCTGCGTCGGGGTAGTTCTCTTTTGGACTCTCATGAGCTaGTGTTCCTGCTCTCACCTG +
Preference number: 4 (lower is better)
Translates to: RGRRVLFYQSPCVGVVLFWTLMS*CSCSHL
Trigger: CAGGTGAGAGCAGGAACACCAGCTCATGAGAGTCCA...AAAGAGAACTACCCCGACGCAGGGGCTCTGGTAGAAGAGCACGCGCCGCCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR CCA 90 bp AGCACGGTCGCCTCTACATTCTGCTGCTGCGGCTCCCAAGAGGGCGGCGCGTGCTTCAAAAGCATCCTTTaGCGAAATGGCAGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: STVASTFCCCGSQEGGACFKSIL*RNGSPL
Trigger: CAGAGGACTGCCATTTCGCCAAAGGATGCTTTTGAA...GCACGCGCCGCCCTCTTGGGAGCCGCAGCAGCAGAATGTAGAGGCGACCGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR CCA 90 bp GTCCCATCGGCAAGCACGCTCTGGGTTGATGCTGGCGCCGGGTCCTTGACTCCATCGTGGCGACAGCAGTaGGTTATCACCATCAGTGAT +
Preference number: 4 (lower is better)
Translates to: VPSASTLWVDAGAGSLTPSWRQQ*VITISD
Trigger: ATCACTGATGGTGATAACCCACTGCTGTCGCCACGA...TGGAGTCAAGGACCCGGCGCCAGCATCAACCCAGAGCGTGCTTGCCGATGGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR TCA 90 bp TTGGGCTTCCTGGACTTGAAGTTGCCCATGCTGGGTCGCAATACGCTGTCCACCTGGGCTTCCTGGACTTaGAGTTGCCCATGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: LGFLDLKLPMLGRNTLSTWASWT*SCPCWV
Trigger: GACCCAGCATGGGCAACTTCAAGTCCAGGAAGCCCA...GGTGGACAGCGTATTGCGACCCAGCATGGGCAACTTCAAGTCCAGGAAGCCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619059.4
ENST00000622363.4
CDS-3UTR TCA 90 bp AAGGGCCCTAACAGGCTCAGTCTCATTAGAGTAGGTGAGGTGGTCACCAACAGGAAGCACGCTCTGGGTTaGTGCTGGCGCCGGGTCCTT +
Preference number: 4 (lower is better)
Translates to: KGPNRLSLIRVGEVVTNRKHALG*CWRRVL
Trigger: AAGGACCCGGCGCCAGCATCAACCCAGAGCGTGCTT...CCTGTTGGTGACCACCTCACCTACTCTAATGAGACTGAGCCTGTTAGGGCCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489341.5
ENST00000622363.4
CDS-3UTR TCA 90 bp TACATTCTGCTGCTGCGGCTCCCAAGAGGGCGGCGCGTGCTCTTCTACCAGAGCATCTTTGTGGACTGGTaGGGGGTCTGCAGAATCTGT +
Preference number: 4 (lower is better)
Translates to: YILLLRLPRGRRVLFYQSIFVDW*GVCRIC
Trigger: ACAGATTCTGCAGACCCCTCACCAGTCCACAAAGAT...GCTCTGGTAGAAGAGCACGCGCCGCCCTCTTGGGAGCCGCAGCAGCAGAATGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR GCA 90 bp CCGCAGCTTCCGGTTTCCCATTTTCTCTGGGGACTGTGGGTTGCTCACACAACAGCCTCTACATTCTGCTaGTGCGGCTCCCAAGAGGGC +
Preference number: 4 (lower is better)
Translates to: PQLPVSHFLWGLWVAHTTASTFC*CGSQEG
Trigger: GCCCTCTTGGGAGCCGCAGCAGCAGAATGTAGAGGC...TGTTGTGTGAGCAACCCACAGTCCCCAGAGAAAATGGGAAACCGGAAGCTGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR CCA 90 bp CGGGCCCGCAGCTTCCGGTTTCCCATTTTCTCTGGGGACTGTGGGTTGCTCACATTCTGCCCATCTTTGTaGACTGGTGAGGGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: RARSFRFPIFSGDCGLLTFCPSL*TGEGSA
Trigger: TGCAGACCCCTCACCAGTCCACAAAGATGGGCAGAA...TGTGAGCAACCCACAGTCCCCAGAGAAAATGGGAAACCGGAAGCTGCGGGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR CCA 90 bp ACGGTCGCCTCTACATTCTGCTGCTGCGGCTCCCAAGAGGGCGGCGCGTGCTCTGCACATACACAAACATaGCATTGCAAGGCAAGTCTC +
Preference number: 4 (lower is better)
Translates to: TVASTFCCCGSQEGGACSAHTQT*HCKASL
Trigger: GAGACTTGCCTTGCAATGCCATGTTTGTGTATGTGC...AGAGCACGCGCCGCCCTCTTGGGAGCCGCAGCAGCAGAATGTAGAGGCGACCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR CAA 72 bp ATGTGCTTGGTGAGCTGGGTGATGGTCTGTGGCTCCTaGCCATCTCCACAGCTGCAGCGTGAAGAACTCCGC +
Preference number: 4 (lower is better)
Translates to: MCLVSWVMVCGS*PSPQLQREELR
Trigger: GCGGAGTTCTTCACGCTGCAGCTGTGGAGATGGCAAGGAGCCACAGACCATCACCCAGCTCACCAAGCACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR TCA 90 bp GGGTCTGCAGAATCTGTCCCATCGGCAAGCACGCTCTGGGTTGATGCTGGCGCCTTACAGTGGTGCTGCTaGAGGAATTATCCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: GSAESVPSASTLWVDAGALQWCC*RNYPEG
Trigger: GCCTTCAGGATAATTCCTTCAGCAGCACCACTGTAA...GGCGCCAGCATCAACCCAGAGCGTGCTTGCCGATGGGACAGATTCTGCAGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR CCA 90 bp GAGGTGGTCACCAACAGGAAGGTGAGATGCTGGATCTGCCAAAGAAGGTTGTTGTTCTCCAGAGGAGCTTaGCTCCGGGCCCGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: EVVTNRKVRCWICQRRLLFSRGA*LRARSF
Trigger: GAAGCTGCGGGCCCGGAGCCAAGCTCCTCTGGAGAA...CAACAACCTTCTTTGGCAGATCCAGCATCTCACCTTCCTGTTGGTGACCACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR CCA 90 bp ACATTCTGCTGCTGCGGCTCCCAAGAGGGCGGCGCGTGCTCTTCTACCAGAGCCCTAGTTTCTCGGAGATaGTCAAGAAGTACAGGCATG +
Preference number: 4 (lower is better)
Translates to: TFCCCGSQEGGACSSTRALVSRR*SRSTGM
Trigger: CATGCCTGTACTTCTTGACCATCTCCGAGAAACTAG...GGCTCTGGTAGAAGAGCACGCGCCGCCCTCTTGGGAGCCGCAGCAGCAGAATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR TCA 90 bp TCCGCTTTGAAGATGGACTTGGGCTTCCTGGACTTGAAGTTGCCCATGCTGGGTTCCCGCTCTCCGCTTTaGAGATGGACTTGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: SALKMDLGFLDLKLPMLGSRSPL*RWTWAS
Trigger: GGAAGCCCAAGTCCATCTTCAAAGCGGAGAGCGGGA...ACCCAGCATGGGCAACTTCAAGTCCAGGAAGCCCAAGTCCATCTTCAAAGCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619059.4
ENST00000622363.4
CDS-3UTR TCA 90 bp GCTCTGGATGTGCTTGGTGAGCTGGGTGATGGTCTGTGGCTCCTTGCCATCTCCTCACCAACAGGAAGGTaGGATGCTGGATCTGCCAAA +
Preference number: 4 (lower is better)
Translates to: ALDVLGELGDGLWLLAISSPTGR*DAGSAK
Trigger: TTTGGCAGATCCAGCATCTCACCTTCCTGTTGGTGA...GGAGATGGCAAGGAGCCACAGACCATCACCCAGCTCACCAAGCACATCCAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR CAA 72 bp GCTTTGAAGATGGACTTGGGCTTCCTGGACTTGAAGTaGCCCATGCTGGGTCGCAATACGCTGTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: ALKMDLGFLDLK*PMLGRNTLSTS
Trigger: GCTGGTGGACAGCGTATTGCGACCCAGCATGGGCAACTTCAAGTCCAGGAAGCCCAAGTCCATCTTCAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619059.4
ENST00000622363.4
3UTR CAA 72 bp GTGCTGGGTGGAGATGGGGCTGACTCGGGGTCTAAGTaGAATCTCTGGCTTTGGCTGAAGATGGAGCATCGT +
Preference number: 4 (lower is better)
Translates to: VLGGDGADSGSK*NLWLWLKMEHR
Trigger: ACGATGCTCCATCTTCAGCCAAAGCCAGAGATTCAACTTAGACCCCGAGTCAGCCCCATCTCCACCCAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR GCA 90 bp GAAGATGGACTTGGGCTTCCTGGACTTGAAGTTGCCCATGCTGGGTCGCAATACGCCTCATCTTCGGCCTaGAGATGCACACTTTGGCAC +
Preference number: 4 (lower is better)
Translates to: EDGLGLPGLEVAHAGSQYASSSA*RCTLWH
Trigger: GTGCCAAAGTGTGCATCTGCAGGCCGAAGATGAGGC...GTATTGCGACCCAGCATGGGCAACTTCAAGTCCAGGAAGCCCAAGTCCATCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619059.4
ENST00000622363.4
CDS-3UTR CCA 90 bp GGCTTTCCGCAGTCTCTTCTTGTCAGCCCTAGTTTCTCGGAGATGGTCAAGAAGGATAGAGCAGCCTGCTaGTCCCCACAGAGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: GFPQSLLVSPSFSEMVKKDRAAC*SPQSGG
Trigger: ACCTCCACTCTGTGGGGACCAGCAGGCTGCTCTATC...CTTCTTGACCATCTCCGAGAAACTAGGGCTGACAAGAAGAGACTGCGGAAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR CCA 90 bp GGATCTGCCAAAGAAGGTTGTTGGCTTCCCTGTGGACGGTCTTCATCAGAGTCCTTCCGCTTGAGGCTCTaGATGTGCTTGGTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: GSAKEGCWLPCGRSSSESFRLRL*MCLVSW
Trigger: CCAGCTCACCAAGCACATCCAGAGCCTCAAGCGGAA...GGACTCTGATGAAGACCGTCCACAGGGAAGCCAACAACCTTCTTTGGCAGATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR CCA 90 bp ACATTCTGCTGCTGCGGCTCCCAAGAGGGCGGCGCGTGCTCTTCTACCAGAGCCCATGGAGAGAGCTGGTaGTTTTACTTCTTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: TFCCCGSQEGGACSSTRAHGESW*FYFFLF
Trigger: GAAAAGAAAGAAGTAAAACCACCAGCTCTCTCCATG...GGCTCTGGTAGAAGAGCACGCGCCGCCCTCTTGGGAGCCGCAGCAGCAGAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR CCA 90 bp TTTGAAGATGGACTTGGGCTTCCTGGACTTGAAGTTGCCCATGCTGGGTCGCAATCACACCTGTGCACCTaGAGCAGGAAGTCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: FEDGLGLPGLEVAHAGSQSHLCT*SRKSRP
Trigger: AGGCCTGGACTTCCTGCTCCAGGTGCACAGGTGTGA...TTGCGACCCAGCATGGGCAACTTCAAGTCCAGGAAGCCCAAGTCCATCTTCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619059.4
ENST00000622363.4
CDS-3UTR TCA 90 bp GAAGATGGACTTGGGCTTCCTGGACTTGAAGTTGCCCATGCTGGGTCGCAATACTCCGAATTTTCCGCTTaGGGCTCTGGATGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: EDGLGLPGLEVAHAGSQYSEFSA*GSGCAW
Trigger: CCAAGCACATCCAGAGCCTCAAGCGGAAAATTCGGA...GTATTGCGACCCAGCATGGGCAACTTCAAGTCCAGGAAGCCCAAGTCCATCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR GCA 90 bp CGGCGCGTGCTCTTCTACCAGAGCCCCTGCGTCGGGGTAGTTCTCTTTATTGTTGTGAGATGCTGGATCTaGCAAAGAAGGTTGTTGGCT +
Preference number: 4 (lower is better)
Translates to: RRVLFYQSPCVGVVLFIVVRCWI*QRRLLA
Trigger: AGCCAACAACCTTCTTTGGCAGATCCAGCATCTCAC...AACAATAAAGAGAACTACCCCGACGCAGGGGCTCTGGTAGAAGAGCACGCGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR CCA 90 bp GGCTTTCCGCAGTCTCTTCTTGTCAGCCCTAGTTTCTCGGAGATGGTCAAGAAGCTGGGTGATGGTCTGTaGCTCCTTGCCATCTCCACA +
Preference number: 4 (lower is better)
Translates to: GFPQSLLVSPSFSEMVKKLGDGL*LLAIST
Trigger: TGTGGAGATGGCAAGGAGCCACAGACCATCACCCAG...CTTCTTGACCATCTCCGAGAAACTAGGGCTGACAAGAAGAGACTGCGGAAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR CAA 72 bp AGGAAGGTGAGATGCTGGATCTGCCAAAGAAGGTTGTaGGCTTCCCTGTGGACGGTCTTCATCAGAGTCCTC +
Preference number: 4 (lower is better)
Translates to: RKVRCWICQRRL*ASLWTVFIRVL
Trigger: GAGGACTCTGATGAAGACCGTCCACAGGGAAGCCAACAACCTTCTTTGGCAGATCCAGCATCTCACCTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489341.5
ENST00000622363.4
3UTR CAA 72 bp AATTTCCGAATTTTCCGCTTGAGGCTCTGGATGTGCTaGGTGAGCTGGGTGATGGTCTGTGGCTCCTTGCCA +
Preference number: 4 (lower is better)
Translates to: NFRIFRLRLWMC*VSWVMVCGSLP
Trigger: TGGCAAGGAGCCACAGACCATCACCCAGCTCACCAAGCACATCCAGAGCCTCAAGCGGAAAATTCGGAAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622363.4
3UTR CAA 72 bp AGCTTCCGGTTTCCCATTTTCTCTGGGGACTGTGGGTaGCTCACACAACAGGTTTCTAGGTGGACCTTTGGG +
Preference number: 4 (lower is better)
Translates to: SFRFPIFSGDCG*LTQQVSRWTFG
Trigger: CCCAAAGGTCCACCTAGAAACCTGTTGTGTGAGCAACCCACAGTCCCCAGAGAAAATGGGAAACCGGAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR TCA 90 bp TTGATGTCATACCTGACAGCTACCATGTCCCATGAAACATCCCTAATACTGGCAAAGCACGCTCTGGGTTaGTGCTGGCGCCGGGTCCTT +
Preference number: 4 (lower is better)
Translates to: LMSYLTATMSHETSLILAKHALG*CWRRVL
Trigger: AAGGACCCGGCGCCAGCATCAACCCAGAGCGTGCTT...TGCCAGTATTAGGGATGTTTCATGGGACATGGTAGCTGTCAGGTATGACATCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR TCA 90 bp TGCTCACACAACAGGTTTCTAGGTGGACCTTTGGGAGCACTCCCTTGTTCTTCTGGCATCATAAACTGCTaGGTGCTGGGTGGAGATGGG +
Preference number: 4 (lower is better)
Translates to: CSHNRFLGGPLGALPCSSGIINC*VLGGDG
Trigger: CCCATCTCCACCCAGCACTCAGCAGTTTATGATGCC...AGAAGAACAAGGGAGTGCTCCCAAAGGTCCACCTAGAAACCTGTTGTGTGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR GCA 90 bp TTTGAAGATGGACTTGGGCTTCCTGGACTTGAAGTTGCCCATGCTGGGTCGCAATTCTACCAGAGCCCCTaGGTCGGGGTAGTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: FEDGLGLPGLEVAHAGSQFYQSP*VGVVLF
Trigger: AAAGAGAACTACCCCGACGCAGGGGCTCTGGTAGAA...TTGCGACCCAGCATGGGCAACTTCAAGTCCAGGAAGCCCAAGTCCATCTTCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619059.4
ENST00000622363.4
CDS-3UTR GCA 90 bp GAGGTGGTCACCAACAGGAAGGTGAGATGCTGGATCTGCCAAAGAAGGTTGTTGCTGTCGGCCTCATTCTaGCCATCTTTGTGGACTGGT +
Preference number: 4 (lower is better)
Translates to: EVVTNRKVRCWICQRRLLLSASF*PSLWTG
Trigger: ACCAGTCCACAAAGATGGGCAGAATGAGGCCGACAG...CAACAACCTTCTTTGGCAGATCCAGCATCTCACCTTCCTGTTGGTGACCACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR GCA 90 bp GAGGTGGTCACCAACAGGAAGGTGAGATGCTGGATCTGCCAAAGAAGGTTGTTGTTGAGGCTCTGGATGTaGTTGGTGAGCTGGGTGATG +
Preference number: 4 (lower is better)
Translates to: EVVTNRKVRCWICQRRLLLRLWM*LVSWVM
Trigger: CATCACCCAGCTCACCAAGCACATCCAGAGCCTCAA...CAACAACCTTCTTTGGCAGATCCAGCATCTCACCTTCCTGTTGGTGACCACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR GCA 90 bp TCTCTTAAGGCTTTCCGCAGTCTCTTCTTGTCAGCCCTAGTTTCTCGGAGATGGTCTTCGTCACACCTGTaGACCTGGAGCAGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: SLKAFRSLFLSALVSRRWSSSHL*TWSRKS
Trigger: GGACTTCCTGCTCCAGGTGCACAGGTGTGACGAAGA...CCATCTCCGAGAAACTAGGGCTGACAAGAAGAGACTGCGGAAAGCCTTAAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR CCA 90 bp TGCCAAAGAAGGTTGTTGGCTTCCCTGTGGACGGTCTTCATCAGAGTCCTCTTCAGAGTGGAGGTCTTCTaGTGCACTGTCGGCCTCATT +
Preference number: 4 (lower is better)
Translates to: CQRRLLASLWTVFIRVLFRVEVF*CTVGLI
Trigger: AATGAGGCCGACAGTGCACCAGAAGACCTCCACTCT...GAAGAGGACTCTGATGAAGACCGTCCACAGGGAAGCCAACAACCTTCTTTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR CCA 90 bp TGCCAAAGAAGGTTGTTGGCTTCCCTGTGGACGGTCTTCATCAGAGTCCTCTTCCAACAGGTTTCTAGGTaGACCTTTGGGAGCACTCCC +
Preference number: 4 (lower is better)
Translates to: CQRRLLASLWTVFIRVLFQQVSR*TFGSTP
Trigger: GGGAGTGCTCCCAAAGGTCCACCTAGAAACCTGTTG...GAAGAGGACTCTGATGAAGACCGTCCACAGGGAAGCCAACAACCTTCTTTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR CCA 90 bp TCAAATTCTCTTAAGGCTTTCCGCAGTCTCTTCTTGTCAGCCCTAGTTTCTCGGAACATCAGCCAAGTCTaGCCGGGGAGCCGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: SNSLKAFRSLFLSALVSRNISQV*PGSRLP
Trigger: AGGGAGACGGCTCCCCGGCCAGACTTGGCTGATGTT...CCGAGAAACTAGGGCTGACAAGAAGAGACTGCGGAAAGCCTTAAGAGAATTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR TCA 90 bp CCGCAGCTTCCGGTTTCCCATTTTCTCTGGGGACTGTGGGTTGCTCACACAACACTGTTTCTTGGCACTTaGAGGCATTGTTTTGTGGAC +
Preference number: 4 (lower is better)
Translates to: PQLPVSHFLWGLWVAHTTLFLGT*RHCFVD
Trigger: GTCCACAAAACAATGCCTTCAAGTGCCAAGAAACAG...TGTTGTGTGAGCAACCCACAGTCCCCAGAGAAAATGGGAAACCGGAAGCTGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR TCA 90 bp GCACTATTAGAATGTTGCATTGGACAAATCCTGAGTCTAAGCCAGTGTGGAAATCTGGCGCCGGGTCCTTaGCTCCATGCACCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: ALLECCIGQILSLSQCGNLAPGP*LHAPEQ
Trigger: CTGCTCAGGTGCATGGAGTCAAGGACCCGGCGCCAG...ATTTCCACACTGGCTTAGACTCAGGATTTGTCCAATGCAACATTCTAATAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR TCA 90 bp GGCTTTCCGCAGTCTCTTCTTGTCAGCCCTAGTTTCTCGGAGATGGTCAAGAAGTCACCAACAGGAAGGTaGGATGCTGGATCTGCCAAA +
Preference number: 4 (lower is better)
Translates to: GFPQSLLVSPSFSEMVKKSPTGR*DAGSAK
Trigger: TTTGGCAGATCCAGCATCTCACCTTCCTGTTGGTGA...CTTCTTGACCATCTCCGAGAAACTAGGGCTGACAAGAAGAGACTGCGGAAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489341.5
ENST00000622363.4
CDS-3UTR GCA 90 bp TTGATGTCATACCTGACAGCTACCATGTCCCATGAAACATCCCTAATACTGGCAGCCTCTACATTCTGCTaGTGCGGCTCCCAAGAGGGC +
Preference number: 4 (lower is better)
Translates to: LMSYLTATMSHETSLILAASTFC*CGSQEG
Trigger: GCCCTCTTGGGAGCCGCAGCAGCAGAATGTAGAGGC...TGCCAGTATTAGGGATGTTTCATGGGACATGGTAGCTGTCAGGTATGACATCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR GCA 90 bp GGACTTGGGCTTCCTGGACTTGAAGTTGCCCATGCTGGGTCGCAATACGCTGTCTCCTCATTTAAGTCCTaGCGAGTTTCAAAAGCATCC +
Preference number: 4 (lower is better)
Translates to: GLGLPGLEVAHAGSQYAVSSFKS*RVSKAS
Trigger: GGATGCTTTTGAAACTCGGCAGGACTTAAATGAGGA...GACAGCGTATTGCGACCCAGCATGGGCAACTTCAAGTCCAGGAAGCCCAAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR GCA 90 bp GAAGATGGACTTGGGCTTCCTGGACTTGAAGTTGCCCATGCTGGGTCGCAATACAACAGGAAGGTGAGATaGTGGATCTGCCAAAGAAGG +
Preference number: 4 (lower is better)
Translates to: EDGLGLPGLEVAHAGSQYNRKVR*WICQRR
Trigger: CCTTCTTTGGCAGATCCAGCATCTCACCTTCCTGTT...GTATTGCGACCCAGCATGGGCAACTTCAAGTCCAGGAAGCCCAAGTCCATCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR GCA 90 bp AAGGGCCCTAACAGGCTCAGTCTCATTAGAGTAGGTGAGGTGGTCACCAACAGGTCTTGCTTAGTTACCTaGAGAATCTGTCCCATCGGC +
Preference number: 4 (lower is better)
Translates to: KGPNRLSLIRVGEVVTNRSCLVT*RICPIG
Trigger: GCCGATGGGACAGATTCTGCAGGTAACTAAGCAAGA...CCTGTTGGTGACCACCTCACCTACTCTAATGAGACTGAGCCTGTTAGGGCCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489341.5
CDS-3UTR GCA 90 bp TTTGAAGATGGACTTGGGCTTCCTGGACTTGAAGTTGCCCATGCTGGGTCGCAAACACAAACATGGCATTaGAAGGCAAGTCTCCGGGCT +
Preference number: 4 (lower is better)
Translates to: FEDGLGLPGLEVAHAGSQTQTWH*KASLRA
Trigger: AGCCCGGAGACTTGCCTTGCAATGCCATGTTTGTGT...TTGCGACCCAGCATGGGCAACTTCAAGTCCAGGAAGCCCAAGTCCATCTTCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR GCA 90 bp GGACTTGGGCTTCCTGGACTTGAAGTTGCCCATGCTGGGTCGCAATACGCTGTCATGCTCTGTCTCCTTTaGCCATTTAAGCTTCATCAC +
Preference number: 4 (lower is better)
Translates to: GLGLPGLEVAHAGSQYAVMLCLL*PFKLHH
Trigger: GTGATGAAGCTTAAATGGGCAAAGGAGACAGAGCAT...GACAGCGTATTGCGACCCAGCATGGGCAACTTCAAGTCCAGGAAGCCCAAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619059.4
CDS-3UTR CCA 90 bp GGCACTATTAGAATGTTGCATTGGACAAATCCTGAGTCTAAGCCAGTGTGGAAATTCTCCAGAGGAGCTTaGCTCCGGGCCCGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: GTIRMLHWTNPESKPVWKFSRGA*LRARSF
Trigger: GAAGCTGCGGGCCCGGAGCCAAGCTCCTCTGGAGAA...TTTCCACACTGGCTTAGACTCAGGATTTGTCCAATGCAACATTCTAATAGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR CCA 90 bp TGCCAAAGAAGGTTGTTGGCTTCCCTGTGGACGGTCTTCATCAGAGTCCTCTTCTTGTTGGCTTCCCTGTaGACGGTCTTCATCAGAGTC +
Preference number: 4 (lower is better)
Translates to: CQRRLLASLWTVFIRVLFLLASL*TVFIRV
Trigger: GACTCTGATGAAGACCGTCCACAGGGAAGCCAACAA...GAAGAGGACTCTGATGAAGACCGTCCACAGGGAAGCCAACAACCTTCTTTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489341.5
ENST00000622363.4
CDS-3UTR CCA 90 bp TCTCTTAAGGCTTTCCGCAGTCTCTTCTTGTCAGCCCTAGTTTCTCGGAGATGGGCCAAAGAAGGTTGTTaGCTTCCCTGTGGACGGTCT +
Preference number: 4 (lower is better)
Translates to: SLKAFRSLFLSALVSRRWAKEGC*LPCGRS
Trigger: AGACCGTCCACAGGGAAGCCAACAACCTTCTTTGGC...CCATCTCCGAGAAACTAGGGCTGACAAGAAGAGACTGCGGAAAGCCTTAAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489341.5
ENST00000622363.4
CDS-3UTR CCA 90 bp GGATCTGCCAAAGAAGGTTGTTGGCTTCCCTGTGGACGGTCTTCATCAGAGTCCAGGAAGGTGAGATGCTaGATCTGCCAAAGAAGGTTG +
Preference number: 4 (lower is better)
Translates to: GSAKEGCWLPCGRSSSESRKVRC*ICQRRL
Trigger: CAACCTTCTTTGGCAGATCCAGCATCTCACCTTCCT...GGACTCTGATGAAGACCGTCCACAGGGAAGCCAACAACCTTCTTTGGCAGATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489341.5
ENST00000622363.4
3UTR CAA 72 bp AACAGGAAGGTGAGATGCTGGATCTGCCAAAGAAGGTaGTTGGCTTCCCTGTGGACGGTCTTCATCAGAGTC +
Preference number: 4 (lower is better)
Translates to: NRKVRCWICQRR*LASLWTVFIRV
Trigger: GACTCTGATGAAGACCGTCCACAGGGAAGCCAACAACCTTCTTTGGCAGATCCAGCATCTCACCTTCCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489341.5
ENST00000622363.4
CDS-3UTR TCA 90 bp CGGCGCGTGCTCTTCTACCAGAGCCCCTGCGTCGGGGTAGTTCTCTTTATTGTTCTGAAGGAATTATCCTaGAGGCTGAAACAGAAACAA +
Preference number: 4 (lower is better)
Translates to: RRVLFYQSPCVGVVLFIVLKELS*RLKQKQ
Trigger: TTGTTTCTGTTTCAGCCTTCAGGATAATTCCTTCAG...AACAATAAAGAGAACTACCCCGACGCAGGGGCTCTGGTAGAAGAGCACGCGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619059.4
ENST00000622363.4
CDS-3UTR TCA 90 bp TTGTCAGCCCTAGTTTCTCGGAGATGGTCAAGAAGTACAGGCATGGTAGCCTCATTTTGTGGACTCTCATaGGCTGGTGTTCCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: LSALVSRRWSRSTGMVASFCGLS*AGVPAL
Trigger: GAGAGCAGGAACACCAGCTCATGAGAGTCCACAAAA...TGAGGCTACCATGCCTGTACTTCTTGACCATCTCCGAGAAACTAGGGCTGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR TCA 90 bp GGATCTGCCAAAGAAGGTTGTTGGCTTCCCTGTGGACGGTCTTCATCAGAGTCCTGGTCTATTCTTGGTTaGAGTCGCACTGTTTCTTGG +
Preference number: 4 (lower is better)
Translates to: GSAKEGCWLPCGRSSSESWSILG*SRTVSW
Trigger: CCAAGAAACAGTGCGACTTCAACCAAGAATAGACCA...GGACTCTGATGAAGACCGTCCACAGGGAAGCCAACAACCTTCTTTGGCAGATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR TCA 90 bp TGCTCACACAACAGGTTTCTAGGTGGACCTTTGGGAGCACTCCCTTGTTCTTCTGGTTATCACCATCAGTaGTGTGATAGAGCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: CSHNRFLGGPLGALPCSSGYHHQ*CDRAAC
Trigger: GCAGGCTGCTCTATCACATCACTGATGGTGATAACC...AGAAGAACAAGGGAGTGCTCCCAAAGGTCCACCTAGAAACCTGTTGTGTGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR TCA 90 bp CTTTGTAAGGAGGTTTATTACATGGGGCCAAACAATGACAGAGATACAGGGTGCTCCACAGCTGCAGCGTaGAGAACTCCGCGGCATCAT +
Preference number: 4 (lower is better)
Translates to: LCKEVYYMGPNNDRDTGCSTAAA*RTPRHH
Trigger: ATGATGCCGCGGAGTTCTTCACGCTGCAGCTGTGGA...GCACCCTGTATCTCTGTCATTGTTTGGCCCCATGTAATAAACCTCCTTACAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468696.1
CDS-3UTR TCA 90 bp AAGGGCCCTAACAGGCTCAGTCTCATTAGAGTAGGTGAGGTGGTCACCAACAGGGAGTCCTCTTCCTCCTaGATTGTTGGAATAAGGGAA +
Preference number: 4 (lower is better)
Translates to: KGPNRLSLIRVGEVVTNRESSSS*IVGIRE
Trigger: TTCCCTTATTCCAACAATTCAGGAGGAAGAGGACTC...CCTGTTGGTGACCACCTCACCTACTCTAATGAGACTGAGCCTGTTAGGGCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489341.5
CDS-3UTR GCA 90 bp TCCCTAATACTGGCACTATTAGAATGTTGCATTGGACAAATCCTGAGTCTAAGCCAAGAGGGCGGCGCGTaGTCTTCTACCAGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: SLILALLECCIGQILSLSQEGGA*SSTRAP
Trigger: AGGGGCTCTGGTAGAAGAGCACGCGCCGCCCTCTTG...GCTTAGACTCAGGATTTGTCCAATGCAACATTCTAATAGTGCCAGTATTAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR GCA 90 bp TCCTTTGCCCATTTAAGCTTCATCACTCTGTTTAGAATCGGCTGTAACATTCGGGCCTCTACATTCTGCTaGTGCGGCTCCCAAGAGGGC +
Preference number: 4 (lower is better)
Translates to: SFAHLSFITLFRIGCNIRASTFC*CGSQEG
Trigger: GCCCTCTTGGGAGCCGCAGCAGCAGAATGTAGAGGC...CCGAATGTTACAGCCGATTCTAAACAGAGTGATGAAGCTTAAATGGGCAAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619059.4
CDS-3UTR GCA 90 bp TTGATGTCATACCTGACAGCTACCATGTCCCATGAAACATCCCTAATACTGGCAGTCGCCTCTACATTCTaGTGCTGCGGCTCCCAAGAG +
Preference number: 4 (lower is better)
Translates to: LMSYLTATMSHETSLILAVASTF*CCGSQE
Trigger: CTCTTGGGAGCCGCAGCAGCAGAATGTAGAGGCGAC...TGCCAGTATTAGGGATGTTTCATGGGACATGGTAGCTGTCAGGTATGACATCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR GCA 90 bp CAAAGAAGGTTGTTGGCTTCCCTGTGGACGGTCTTCATCAGAGTCCTCTTCCTCAACAGGAAGGTGAGATaGTGGATCTGCCAAAGAAGG +
Preference number: 4 (lower is better)
Translates to: QRRLLASLWTVFIRVLFLNRKVR*WICQRR
Trigger: CCTTCTTTGGCAGATCCAGCATCTCACCTTCCTGTT...GAGGAAGAGGACTCTGATGAAGACCGTCCACAGGGAAGCCAACAACCTTCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489341.5
ENST00000622363.4
CDS-3UTR CCA 90 bp CAAAGAAGGTTGTTGGCTTCCCTGTGGACGGTCTTCATCAGAGTCCTCTTCCTCACCTTAGAATCCTCCTaGGGAGGAAGTTGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: QRRLLASLWTVFIRVLFLTLESS*GGSCSL
Trigger: AAGAGAGCAACTTCCTCCCCAGGAGGATTCTAAGGT...GAGGAAGAGGACTCTGATGAAGACCGTCCACAGGGAAGCCAACAACCTTCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR TCA 90 bp TACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTGACATCCTGTTACTGGCGCCGGGTCCTTaGCTCCATGCACCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: YCHEGSFITLVLLCDILLLAPGP*LHAPEQ
Trigger: CTGCTCAGGTGCATGGAGTCAAGGACCCGGCGCCAG...TAACAGGATGTCACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR TCA 90 bp TTTCCGCTTGAGGCTCTGGATGTGCTTGGTGAGCTGGGTGATGGTCTGTGGCTCAACAAGGTTGGTACATaGGAGAAAATGTTGACCTTT +
Preference number: 4 (lower is better)
Translates to: FPLEALDVLGELGDGLWLNKVGT*EKMLTF
Trigger: AAAGGTCAACATTTTCTCTCATGTACCAACCTTGTT...GAGCCACAGACCATCACCCAGCTCACCAAGCACATCCAGAGCCTCAAGCGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR GCA 90 bp AATACTGGCACTATTAGAATGTTGCATTGGACAAATCCTGAGTCTAAGCCAGTGTCTACATTCTGCTGCTaGGGCTCCCAAGAGGGCGGC +
Preference number: 4 (lower is better)
Translates to: NTGTIRMLHWTNPESKPVSTFCC*GSQEGG
Trigger: GCCGCCCTCTTGGGAGCCGCAGCAGCAGAATGTAGA...CACTGGCTTAGACTCAGGATTTGTCCAATGCAACATTCTAATAGTGCCAGTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR GCA 90 bp TTGGGCTTCCTGGACTTGAAGTTGCCCATGCTGGGTCGCAATACGCTGTCCACCATGAGGTTCTTGTCTTaGTTAGTTACCTTAGAATCC +
Preference number: 4 (lower is better)
Translates to: LGFLDLKLPMLGRNTLSTMRFLS*LVTLES
Trigger: GGATTCTAAGGTAACTAAGCAAGACAAGAACCTCAT...GGTGGACAGCGTATTGCGACCCAGCATGGGCAACTTCAAGTCCAGGAAGCCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR CCA 90 bp TGCCAAAGAAGGTTGTTGGCTTCCCTGTGGACGGTCTTCATCAGAGTCCTCTTCCCTCTGGTCTATTCTTaGTTGAAGTCGCACTGTTTC +
Preference number: 4 (lower is better)
Translates to: CQRRLLASLWTVFIRVLFPLVYS*LKSHCF
Trigger: GAAACAGTGCGACTTCAACCAAGAATAGACCAGAGG...GAAGAGGACTCTGATGAAGACCGTCCACAGGGAAGCCAACAACCTTCTTTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR CCA 90 bp CAAAGAAGGTTGTTGGCTTCCCTGTGGACGGTCTTCATCAGAGTCCTCTTCCTCTTGAATCTCTGGCTTTaGCTGAAGATGGAGCATCGT +
Preference number: 4 (lower is better)
Translates to: QRRLLASLWTVFIRVLFLLNLWL*LKMEHR
Trigger: ACGATGCTCCATCTTCAGCCAAAGCCAGAGATTCAA...GAGGAAGAGGACTCTGATGAAGACCGTCCACAGGGAAGCCAACAACCTTCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR CCA 90 bp AATACTGGCACTATTAGAATGTTGCATTGGACAAATCCTGAGTCTAAGCCAGTGAACATCAGCCAAGTCTaGCCGGGGAGCCGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: NTGTIRMLHWTNPESKPVNISQV*PGSRLP
Trigger: AGGGAGACGGCTCCCCGGCCAGACTTGGCTGATGTT...CACTGGCTTAGACTCAGGATTTGTCCAATGCAACATTCTAATAGTGCCAGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR CCA 90 bp CAAAGAAGGTTGTTGGCTTCCCTGTGGACGGTCTTCATCAGAGTCCTCTTCCTCCTAGTTTCTCGGAGATaGTCAAGAAGTACAGGCATG +
Preference number: 4 (lower is better)
Translates to: QRRLLASLWTVFIRVLFLLVSRR*SRSTGM
Trigger: CATGCCTGTACTTCTTGACCATCTCCGAGAAACTAG...GAGGAAGAGGACTCTGATGAAGACCGTCCACAGGGAAGCCAACAACCTTCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489341.5
ENST00000622363.4
CDS-3UTR TCA 90 bp AATACTGGCACTATTAGAATGTTGCATTGGACAAATCCTGAGTCTAAGCCAGTGTGGGCTTCCTGGACTTaGAGTTGCCCATGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: NTGTIRMLHWTNPESKPVWASWT*SCPCWV
Trigger: GACCCAGCATGGGCAACTTCAAGTCCAGGAAGCCCA...CACTGGCTTAGACTCAGGATTTGTCCAATGCAACATTCTAATAGTGCCAGTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR TCA 90 bp GCACTATTAGAATGTTGCATTGGACAAATCCTGAGTCTAAGCCAGTGTGGAAATTCCCGCTCTCCGCTTTaGAGATGGACTTGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: ALLECCIGQILSLSQCGNSRSPL*RWTWAS
Trigger: GGAAGCCCAAGTCCATCTTCAAAGCGGAGAGCGGGA...ATTTCCACACTGGCTTAGACTCAGGATTTGTCCAATGCAACATTCTAATAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR TCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCACTGGCGCCGGGTCCTTaGCTCCATGCACCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSLAPGP*LHAPEQ
Trigger: CTGCTCAGGTGCATGGAGTCAAGGACCCGGCGCCAG...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR TCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTCTGGCGCCGGGTCCTTaGCTCCATGCACCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFLAPGP*LHAPEQ
Trigger: CTGCTCAGGTGCATGGAGTCAAGGACCCGGCGCCAG...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR TCA 90 bp GGCCAAACAATGACAGAGATACAGGGTGCTTTATTTCAAAAGGGAGTTACAGTCGGCATCATAAACTGCTaGGTGCTGGGTGGAGATGGG +
Preference number: 4 (lower is better)
Translates to: GQTMTEIQGALFQKGVTVGIINC*VLGGDG
Trigger: CCCATCTCCACCCAGCACTCAGCAGTTTATGATGCC...GACTGTAACTCCCTTTTGAAATAAAGCACCCTGTATCTCTGTCATTGTTTGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468696.1
CDS-3UTR TCA 90 bp TTTTACAGATTGATGTCATACCTGACAGCTACCATGTCCCATGAAACATCCCTATCCACAGCTGCAGCGTaGAGAACTCCGCGGCATCAT +
Preference number: 4 (lower is better)
Translates to: FYRLMSYLTATMSHETSLSTAAA*RTPRHH
Trigger: ATGATGCCGCGGAGTTCTTCACGCTGCAGCTGTGGA...TAGGGATGTTTCATGGGACATGGTAGCTGTCAGGTATGACATCAATCTGTAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR GCA 90 bp TTGCTTGATAATTCTGTATCGGTCATAAAGCGGCTTTATGAGGTTCTTGTCTTGTCTACATTCTGCTGCTaGGGCTCCCAAGAGGGCGGC +
Preference number: 4 (lower is better)
Translates to: LLDNSVSVIKRLYEVLVLSTFCC*GSQEGG
Trigger: GCCGCCCTCTTGGGAGCCGCAGCAGCAGAATGTAGA...CAAGACAAGAACCTCATAAAGCCGCTTTATGACCGATACAGAATTATCAAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR GCA 90 bp CAAAGAAGGTTGTTGGCTTCCCTGTGGACGGTCTTCATCAGAGTCCTCTTCCTCTCCTCATTTAAGTCCTaGCGAGTTTCAAAAGCATCC +
Preference number: 4 (lower is better)
Translates to: QRRLLASLWTVFIRVLFLSSFKS*RVSKAS
Trigger: GGATGCTTTTGAAACTCGGCAGGACTTAAATGAGGA...GAGGAAGAGGACTCTGATGAAGACCGTCCACAGGGAAGCCAACAACCTTCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489341.5
ENST00000622363.4
CDS-3UTR GCA 90 bp TTGATGTCATACCTGACAGCTACCATGTCCCATGAAACATCCCTAATACTGGCACTGTCGGCCTCATTCTaGCCATCTTTGTGGACTGGT +
Preference number: 4 (lower is better)
Translates to: LMSYLTATMSHETSLILALSASF*PSLWTG
Trigger: ACCAGTCCACAAAGATGGGCAGAATGAGGCCGACAG...TGCCAGTATTAGGGATGTTTCATGGGACATGGTAGCTGTCAGGTATGACATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR GCA 90 bp TTGGGCTTCCTGGACTTGAAGTTGCCCATGCTGGGTCGCAATACGCTGTCCACCATACTACCACTAAAGTaGTTCCATTTTCATTGTGTC +
Preference number: 4 (lower is better)
Translates to: LGFLDLKLPMLGRNTLSTILPLK*FHFHCV
Trigger: GACACAATGAAAATGGAAGCACTTTAGTGGTAGTAT...GGTGGACAGCGTATTGCGACCCAGCATGGGCAACTTCAAGTCCAGGAAGCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR CCA 90 bp TGCCAAAGAAGGTTGTTGGCTTCCCTGTGGACGGTCTTCATCAGAGTCCTCTTCAGTCGCACTGTTTCTTaGCACTTGAAGGCATTGTTT +
Preference number: 4 (lower is better)
Translates to: CQRRLLASLWTVFIRVLFSRTVS*HLKALF
Trigger: AAACAATGCCTTCAAGTGCCAAGAAACAGTGCGACT...GAAGAGGACTCTGATGAAGACCGTCCACAGGGAAGCCAACAACCTTCTTTGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR CCA 90 bp TTGATGTCATACCTGACAGCTACCATGTCCCATGAAACATCCCTAATACTGGCAGAAGATGGAGCATCGTaGCGACAGCAGTGGGTTATC +
Preference number: 4 (lower is better)
Translates to: LMSYLTATMSHETSLILAEDGAS*RQQWVI
Trigger: GATAACCCACTGCTGTCGCCACGATGCTCCATCTTC...TGCCAGTATTAGGGATGTTTCATGGGACATGGTAGCTGTCAGGTATGACATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR CCA 90 bp AATTCTCTTAAGGCTTTCCGCAGTCTCTTCTTGTCAGCCCTAGTTTCTCGGAGAGTTTCCCATTTTCTCTaGGGACTGTGGGTTGCTCAC +
Preference number: 4 (lower is better)
Translates to: NSLKAFRSLFLSALVSRRVSHFL*GLWVAH
Trigger: GTGAGCAACCCACAGTCCCCAGAGAAAATGGGAAAC...TCTCCGAGAAACTAGGGCTGACAAGAAGAGACTGCGGAAAGCCTTAAGAGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR CCA 90 bp AGAAGGTTGTTGGCTTCCCTGTGGACGGTCTTCATCAGAGTCCTCTTCCTCCTGCATGGAGAGAGCTGGTaGTTTTACTTCTTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: RRLLASLWTVFIRVLFLLHGESW*FYFFLF
Trigger: GAAAAGAAAGAAGTAAAACCACCAGCTCTCTCCATG...CAGGAGGAAGAGGACTCTGATGAAGACCGTCCACAGGGAAGCCAACAACCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489341.5
CDS-3UTR TCA 90 bp GTTTGCAGTATATACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTAAGCACGCTCTGGGTTaGTGCTGGCGCCGGGTCCTT +
Preference number: 4 (lower is better)
Translates to: VCSIYCHEGSFITLVLLCKHALG*CWRRVL
Trigger: AAGGACCCGGCGCCAGCATCAACCCAGAGCGTGCTT...ACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTATATACTGCAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR TCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTAAGCACGCTCTGGGTTaGTGCTGGCGCCGGGTCCTT +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFKHALG*CWRRVL
Trigger: AAGGACCCGGCGCCAGCATCAACCCAGAGCGTGCTT...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR TCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCAAAGCACGCTCTGGGTTaGTGCTGGCGCCGGGTCCTT +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSKHALG*CWRRVL
Trigger: AAGGACCCGGCGCCAGCATCAACCCAGAGCGTGCTT...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR TCA 90 bp TTGATGTCATACCTGACAGCTACCATGTCCCATGAAACATCCCTAATACTGGCAGGTTATCACCATCAGTaGTGTGATAGAGCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: LMSYLTATMSHETSLILAGYHHQ*CDRAAC
Trigger: GCAGGCTGCTCTATCACATCACTGATGGTGATAACC...TGCCAGTATTAGGGATGTTTCATGGGACATGGTAGCTGTCAGGTATGACATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR TCA 90 bp AATACTGGCACTATTAGAATGTTGCATTGGACAAATCCTGAGTCTAAGCCAGTGATCTCTGGCTTTGGCTaGAGATGGAGCATCGTGGCG +
Preference number: 4 (lower is better)
Translates to: NTGTIRMLHWTNPESKPVISGFG*RWSIVA
Trigger: CGCCACGATGCTCCATCTTCAGCCAAAGCCAGAGAT...CACTGGCTTAGACTCAGGATTTGTCCAATGCAACATTCTAATAGTGCCAGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR TCA 90 bp TCCCTAATACTGGCACTATTAGAATGTTGCATTGGACAAATCCTGAGTCTAAGCGGCATCATAAACTGCTaGGTGCTGGGTGGAGATGGG +
Preference number: 4 (lower is better)
Translates to: SLILALLECCIGQILSLSGIINC*VLGGDG
Trigger: CCCATCTCCACCCAGCACTCAGCAGTTTATGATGCC...GCTTAGACTCAGGATTTGTCCAATGCAACATTCTAATAGTGCCAGTATTAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR GCA 90 bp GTTTGCAGTATATACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTCAAGAGGGCGGCGCGTaGTCTTCTACCAGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: VCSIYCHEGSFITLVLLCQEGGA*SSTRAP
Trigger: AGGGGCTCTGGTAGAAGAGCACGCGCCGCCCTCTTG...ACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTATATACTGCAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR GCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCACAAGAGGGCGGCGCGTaGTCTTCTACCAGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSQEGGA*SSTRAP
Trigger: AGGGGCTCTGGTAGAAGAGCACGCGCCGCCCTCTTG...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR GCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTCAAGAGGGCGGCGCGTaGTCTTCTACCAGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFQEGGA*SSTRAP
Trigger: AGGGGCTCTGGTAGAAGAGCACGCGCCGCCCTCTTG...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR GCA 90 bp AATTCTCTTAAGGCTTTCCGCAGTCTCTTCTTGTCAGCCCTAGTTTCTCGGAGAGTGAGATGCTGGATCTaGCAAAGAAGGTTGTTGGCT +
Preference number: 4 (lower is better)
Translates to: NSLKAFRSLFLSALVSRRVRCWI*QRRLLA
Trigger: AGCCAACAACCTTCTTTGGCAGATCCAGCATCTCAC...TCTCCGAGAAACTAGGGCTGACAAGAAGAGACTGCGGAAAGCCTTAAGAGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489341.5
ENST00000622363.4
CDS-3UTR GCA 90 bp TGCCAAAGAAGGTTGTTGGCTTCCCTGTGGACGGTCTTCATCAGAGTCCTCTTCATGAGGTTCTTGTCTTaGTTAGTTACCTGCAGAATC +
Preference number: 4 (lower is better)
Translates to: CQRRLLASLWTVFIRVLFMRFLS*LVTCRI
Trigger: GATTCTGCAGGTAACTAAGCAAGACAAGAACCTCAT...GAAGAGGACTCTGATGAAGACCGTCCACAGGGAAGCCAACAACCTTCTTTGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489341.5
CDS-3UTR CCA 90 bp GGCACTATTAGAATGTTGCATTGGACAAATCCTGAGTCTAAGCCAGTGTGGAAATGGACTCTCATGAGCTaGTGTTCCTGCTCTCACCTG +
Preference number: 4 (lower is better)
Translates to: GTIRMLHWTNPESKPVWKWTLMS*CSCSHL
Trigger: CAGGTGAGAGCAGGAACACCAGCTCATGAGAGTCCA...TTTCCACACTGGCTTAGACTCAGGATTTGTCCAATGCAACATTCTAATAGTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR CCA 90 bp TCAAATTCTCTTAAGGCTTTCCGCAGTCTCTTCTTGTCAGCCCTAGTTTCTCGGCATCCTTTGGCGAAATaGCAGTCCTCTGGTCTATTC +
Preference number: 4 (lower is better)
Translates to: SNSLKAFRSLFLSALVSRHPLAK*QSSGLF
Trigger: GAATAGACCAGAGGACTGCCATTTCGCCAAAGGATG...CCGAGAAACTAGGGCTGACAAGAAGAGACTGCGGAAAGCCTTAAGAGAATTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR CCA 90 bp GGAGTAACTTGTGGAACTAAGAAACCAACAACAAAGCAGTTATGTGGGCTAAAAGATAGAGCAGCCTGCTaGTCCCCACAGAGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: GVTCGTKKPTTKQLCGLKDRAAC*SPQSGG
Trigger: ACCTCCACTCTGTGGGGACCAGCAGGCTGCTCTATC...TTTTAGCCCACATAACTGCTTTGTTGTTGGTTTCTTAGTTCCACAAGTTACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR CCA 90 bp TTTTACAGATTGATGTCATACCTGACAGCTACCATGTCCCATGAAACATCCCTACTGGGTGATGGTCTGTaGCTCCTTGCCATCTCCACA +
Preference number: 4 (lower is better)
Translates to: FYRLMSYLTATMSHETSLLGDGL*LLAIST
Trigger: TGTGGAGATGGCAAGGAGCCACAGACCATCACCCAG...TAGGGATGTTTCATGGGACATGGTAGCTGTCAGGTATGACATCAATCTGTAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR CCA 90 bp AGGAGGTTTATTACATGGGGCCAAACAATGACAGAGATACAGGGTGCTTTATTTATGTGCTTGGTGAGCTaGGTGATGGTCTGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: RRFITWGQTMTEIQGALFMCLVS*VMVCGS
Trigger: GGAGCCACAGACCATCACCCAGCTCACCAAGCACAT...AAATAAAGCACCCTGTATCTCTGTCATTGTTTGGCCCCATGTAATAAACCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468696.1
CDS-3UTR CCA 90 bp AGGAGGTTTATTACATGGGGCCAAACAATGACAGAGATACAGGGTGCTTTATTTTTCCGCTTGAGGCTCTaGATGTGCTTGGTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: RRFITWGQTMTEIQGALFFRLRL*MCLVSW
Trigger: CCAGCTCACCAAGCACATCCAGAGCCTCAAGCGGAA...AAATAAAGCACCCTGTATCTCTGTCATTGTTTGGCCCCATGTAATAAACCTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468696.1
CDS-3UTR CCA 90 bp TTGATGTCATACCTGACAGCTACCATGTCCCATGAAACATCCCTAATACTGGCAGTTTCCCATTTTCTCTaGGGACTGTGGGTTGCTCAC +
Preference number: 4 (lower is better)
Translates to: LMSYLTATMSHETSLILAVSHFL*GLWVAH
Trigger: GTGAGCAACCCACAGTCCCCAGAGAAAATGGGAAAC...TGCCAGTATTAGGGATGTTTCATGGGACATGGTAGCTGTCAGGTATGACATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR CCA 90 bp GTTTGCAGTATATACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTTTCTCCAGAGGAGCTTaGCTCCGGGCCCGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: VCSIYCHEGSFITLVLLCFSRGA*LRARSF
Trigger: GAAGCTGCGGGCCCGGAGCCAAGCTCCTCTGGAGAA...ACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTATATACTGCAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR CCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCATTCTCCAGAGGAGCTTaGCTCCGGGCCCGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSFSRGA*LRARSF
Trigger: GAAGCTGCGGGCCCGGAGCCAAGCTCCTCTGGAGAA...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTTTCTCCAGAGGAGCTTaGCTCCGGGCCCGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFFSRGA*LRARSF
Trigger: GAAGCTGCGGGCCCGGAGCCAAGCTCCTCTGGAGAA...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR TCA 90 bp TACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTGACATCCTGTTATGGGCTTCCTGGACTTaGAGTTGCCCATGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: YCHEGSFITLVLLCDILLWASWT*SCPCWV
Trigger: GACCCAGCATGGGCAACTTCAAGTCCAGGAAGCCCA...TAACAGGATGTCACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR TCA 90 bp CCAAACAATGACAGAGATACAGGGTGCTTTATTTCAAAAGGGAGTTACAGTCTAATCTCTGGCTTTGGCTaGAGATGGAGCATCGTGGCG +
Preference number: 4 (lower is better)
Translates to: PNNDRDTGCFISKGSYSLISGFG*RWSIVA
Trigger: CGCCACGATGCTCCATCTTCAGCCAAAGCCAGAGAT...TAGACTGTAACTCCCTTTTGAAATAAAGCACCCTGTATCTCTGTCATTGTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468696.1
CDS-3UTR TCA 90 bp TTTCTTTGTAAGGAGGTTTATTACATGGGGCCAAACAATGACAGAGATACAGGGTCCGAATTTTCCGCTTaGGGCTCTGGATGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: FLCKEVYYMGPNNDRDTGSEFSA*GSGCAW
Trigger: CCAAGCACATCCAGAGCCTCAAGCGGAAAATTCGGA...CCCTGTATCTCTGTCATTGTTTGGCCCCATGTAATAAACCTCCTTACAAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468696.1
CDS-3UTR TCA 90 bp GGCACTATTAGAATGTTGCATTGGACAAATCCTGAGTCTAAGCCAGTGTGGAAATCACCAACAGGAAGGTaGGATGCTGGATCTGCCAAA +
Preference number: 4 (lower is better)
Translates to: GTIRMLHWTNPESKPVWKSPTGR*DAGSAK
Trigger: TTTGGCAGATCCAGCATCTCACCTTCCTGTTGGTGA...TTTCCACACTGGCTTAGACTCAGGATTTGTCCAATGCAACATTCTAATAGTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR GCA 90 bp GTTTGCAGTATATACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTTCTACATTCTGCTGCTaGGGCTCCCAAGAGGGCGGC +
Preference number: 4 (lower is better)
Translates to: VCSIYCHEGSFITLVLLCSTFCC*GSQEGG
Trigger: GCCGCCCTCTTGGGAGCCGCAGCAGCAGAATGTAGA...ACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTATATACTGCAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR GCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCATCTACATTCTGCTGCTaGGGCTCCCAAGAGGGCGGC +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSSTFCC*GSQEGG
Trigger: GCCGCCCTCTTGGGAGCCGCAGCAGCAGAATGTAGA...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR GCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTTCTACATTCTGCTGCTaGGGCTCCCAAGAGGGCGGC +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFSTFCC*GSQEGG
Trigger: GCCGCCCTCTTGGGAGCCGCAGCAGCAGAATGTAGA...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR GCA 90 bp GTTTGCAGTATATACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTGCCTCTACATTCTGCTaGTGCGGCTCCCAAGAGGGC +
Preference number: 4 (lower is better)
Translates to: VCSIYCHEGSFITLVLLCASTFC*CGSQEG
Trigger: GCCCTCTTGGGAGCCGCAGCAGCAGAATGTAGAGGC...ACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTATATACTGCAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR GCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTGCCTCTACATTCTGCTaGTGCGGCTCCCAAGAGGGC +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFASTFC*CGSQEG
Trigger: GCCCTCTTGGGAGCCGCAGCAGCAGAATGTAGAGGC...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR GCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCAGCCTCTACATTCTGCTaGTGCGGCTCCCAAGAGGGC +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSASTFC*CGSQEG
Trigger: GCCCTCTTGGGAGCCGCAGCAGCAGAATGTAGAGGC...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CCA 90 bp TTGATGTCATACCTGACAGCTACCATGTCCCATGAAACATCCCTAATACTGGCACATCCTTTGGCGAAATaGCAGTCCTCTGGTCTATTC +
Preference number: 4 (lower is better)
Translates to: LMSYLTATMSHETSLILAHPLAK*QSSGLF
Trigger: GAATAGACCAGAGGACTGCCATTTCGCCAAAGGATG...TGCCAGTATTAGGGATGTTTCATGGGACATGGTAGCTGTCAGGTATGACATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR CCA 90 bp GCACTATTAGAATGTTGCATTGGACAAATCCTGAGTCTAAGCCAGTGTGGAAATTTCTGCCCATCTTTGTaGACTGGTGAGGGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: ALLECCIGQILSLSQCGNFCPSL*TGEGSA
Trigger: TGCAGACCCCTCACCAGTCCACAAAGATGGGCAGAA...ATTTCCACACTGGCTTAGACTCAGGATTTGTCCAATGCAACATTCTAATAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR CCA 90 bp GCACTATTAGAATGTTGCATTGGACAAATCCTGAGTCTAAGCCAGTGTGGAAATAGAGTGGAGGTCTTCTaGTGCACTGTCGGCCTCATT +
Preference number: 4 (lower is better)
Translates to: ALLECCIGQILSLSQCGNRVEVF*CTVGLI
Trigger: AATGAGGCCGACAGTGCACCAGAAGACCTCCACTCT...ATTTCCACACTGGCTTAGACTCAGGATTTGTCCAATGCAACATTCTAATAGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR CCA 90 bp AGGAGGTTTATTACATGGGGCCAAACAATGACAGAGATACAGGGTGCTTTATTTGAAGATGGAGCATCGTaGCGACAGCAGTGGGTTATC +
Preference number: 4 (lower is better)
Translates to: RRFITWGQTMTEIQGALFEDGAS*RQQWVI
Trigger: GATAACCCACTGCTGTCGCCACGATGCTCCATCTTC...AAATAAAGCACCCTGTATCTCTGTCATTGTTTGGCCCCATGTAATAAACCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468696.1
CDS-3UTR CCA 90 bp GACAGAGATACAGGGTGCTTTATTTCAAAAGGGAGTTACAGTCTAAGCAGAAAACTGGGTGATGGTCTGTaGCTCCTTGCCATCTCCACA +
Preference number: 4 (lower is better)
Translates to: DRDTGCFISKGSYSLSRKLGDGL*LLAIST
Trigger: TGTGGAGATGGCAAGGAGCCACAGACCATCACCCAG...TTTTCTGCTTAGACTGTAACTCCCTTTTGAAATAAAGCACCCTGTATCTCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468696.1
CDS-3UTR CCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTAACATCAGCCAAGTCTaGCCGGGGAGCCGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFNISQV*PGSRLP
Trigger: AGGGAGACGGCTCCCCGGCCAGACTTGGCTGATGTT...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCAAACATCAGCCAAGTCTaGCCGGGGAGCCGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSNISQV*PGSRLP
Trigger: AGGGAGACGGCTCCCCGGCCAGACTTGGCTGATGTT...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR TCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTTGGGCTTCCTGGACTTaGAGTTGCCCATGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFWASWT*SCPCWV
Trigger: GACCCAGCATGGGCAACTTCAAGTCCAGGAAGCCCA...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR TCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCATGGGCTTCCTGGACTTaGAGTTGCCCATGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSWASWT*SCPCWV
Trigger: GACCCAGCATGGGCAACTTCAAGTCCAGGAAGCCCA...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR TCA 90 bp GTTTGCAGTATATACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTTCCCGCTCTCCGCTTTaGAGATGGACTTGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: VCSIYCHEGSFITLVLLCSRSPL*RWTWAS
Trigger: GGAAGCCCAAGTCCATCTTCAAAGCGGAGAGCGGGA...ACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTATATACTGCAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR TCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTTCCCGCTCTCCGCTTTaGAGATGGACTTGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFSRSPL*RWTWAS
Trigger: GGAAGCCCAAGTCCATCTTCAAAGCGGAGAGCGGGA...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR TCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCATCCCGCTCTCCGCTTTaGAGATGGACTTGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSSRSPL*RWTWAS
Trigger: GGAAGCCCAAGTCCATCTTCAAAGCGGAGAGCGGGA...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR TCA 90 bp TTTTACAGATTGATGTCATACCTGACAGCTACCATGTCCCATGAAACATCCCTATTTTGTGGACTCTCATaGGCTGGTGTTCCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: FYRLMSYLTATMSHETSLFCGLS*AGVPAL
Trigger: GAGAGCAGGAACACCAGCTCATGAGAGTCCACAAAA...TAGGGATGTTTCATGGGACATGGTAGCTGTCAGGTATGACATCAATCTGTAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR TCA 90 bp AATACTGGCACTATTAGAATGTTGCATTGGACAAATCCTGAGTCTAAGCCAGTGATCTTTGTGGACTGGTaGGGGGTCTGCAGAATCTGT +
Preference number: 4 (lower is better)
Translates to: NTGTIRMLHWTNPESKPVIFVDW*GVCRIC
Trigger: ACAGATTCTGCAGACCCCTCACCAGTCCACAAAGAT...CACTGGCTTAGACTCAGGATTTGTCCAATGCAACATTCTAATAGTGCCAGTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR TCA 90 bp TACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTGACATCCTGTTAATCTCTGGCTTTGGCTaGAGATGGAGCATCGTGGCG +
Preference number: 4 (lower is better)
Translates to: YCHEGSFITLVLLCDILLISGFG*RWSIVA
Trigger: CGCCACGATGCTCCATCTTCAGCCAAAGCCAGAGAT...TAACAGGATGTCACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR TCA 90 bp TACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTGACATCCTGTTAGGCATCATAAACTGCTaGGTGCTGGGTGGAGATGGG +
Preference number: 4 (lower is better)
Translates to: YCHEGSFITLVLLCDILLGIINC*VLGGDG
Trigger: CCCATCTCCACCCAGCACTCAGCAGTTTATGATGCC...TAACAGGATGTCACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR TCA 90 bp GTTTGCAGTATATACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTTCCACAGCTGCAGCGTaGAGAACTCCGCGGCATCAT +
Preference number: 4 (lower is better)
Translates to: VCSIYCHEGSFITLVLLCSTAAA*RTPRHH
Trigger: ATGATGCCGCGGAGTTCTTCACGCTGCAGCTGTGGA...ACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTATATACTGCAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR TCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTTCCACAGCTGCAGCGTaGAGAACTCCGCGGCATCAT +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFSTAAA*RTPRHH
Trigger: ATGATGCCGCGGAGTTCTTCACGCTGCAGCTGTGGA...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR TCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCATCCACAGCTGCAGCGTaGAGAACTCCGCGGCATCAT +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSSTAAA*RTPRHH
Trigger: ATGATGCCGCGGAGTTCTTCACGCTGCAGCTGTGGA...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR TCA 90 bp GGCACTATTAGAATGTTGCATTGGACAAATCCTGAGTCTAAGCCAGTGTGGAAAAGCTACCATGTCCCATaGAACATCCCTAATACTGGC +
Preference number: 4 (lower is better)
Translates to: GTIRMLHWTNPESKPVWKSYHVP*NIPNTG
Trigger: GCCAGTATTAGGGATGTTTCATGGGACATGGTAGCT...TTTCCACACTGGCTTAGACTCAGGATTTGTCCAATGCAACATTCTAATAGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR TCA 90 bp TGCTCACACAACAGGTTTCTAGGTGGACCTTTGGGAGCACTCCCTTGTTCTTCTTTTATTTTAGGGTACTaGGAGCCTAGCAGACTTAAA +
Preference number: 4 (lower is better)
Translates to: CSHNRFLGGPLGALPCSSFILGY*EPSRLK
Trigger: TTTAAGTCTGCTAGGCTCTCAGTACCCTAAAATAAA...AGAAGAACAAGGGAGTGCTCCCAAAGGTCCACCTAGAAACCTGTTGTGTGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR GCA 90 bp GGAGTAACTTGTGGAACTAAGAAACCAACAACAAAGCAGTTATGTGGGCTAAAATTCTACCAGAGCCCCTaGGTCGGGGTAGTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: GVTCGTKKPTTKQLCGLKFYQSP*VGVVLF
Trigger: AAAGAGAACTACCCCGACGCAGGGGCTCTGGTAGAA...TTTTAGCCCACATAACTGCTTTGTTGTTGGTTTCTTAGTTCCACAAGTTACTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR GCA 90 bp GTTTGCAGTATATACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTGTCGCCTCTACATTCTaGTGCTGCGGCTCCCAAGAG +
Preference number: 4 (lower is better)
Translates to: VCSIYCHEGSFITLVLLCVASTF*CCGSQE
Trigger: CTCTTGGGAGCCGCAGCAGCAGAATGTAGAGGCGAC...ACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTATATACTGCAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR GCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCAGTCGCCTCTACATTCTaGTGCTGCGGCTCCCAAGAG +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSVASTF*CCGSQE
Trigger: CTCTTGGGAGCCGCAGCAGCAGAATGTAGAGGCGAC...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR GCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTGTCGCCTCTACATTCTaGTGCTGCGGCTCCCAAGAG +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFVASTF*CCGSQE
Trigger: CTCTTGGGAGCCGCAGCAGCAGAATGTAGAGGCGAC...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR GCA 90 bp TACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTGACATCCTGTTAGTGGAGGTCTTCTGGTaGACTGTCGGCCTCATTCTG +
Preference number: 4 (lower is better)
Translates to: YCHEGSFITLVLLCDILLVEVFW*TVGLIL
Trigger: CAGAATGAGGCCGACAGTGCACCAGAAGACCTCCAC...TAACAGGATGTCACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR GCA 90 bp GGAGTAACTTGTGGAACTAAGAAACCAACAACAAAGCAGTTATGTGGGCTAAAATTGAGGCTCTGGATGTaGTTGGTGAGCTGGGTGATG +
Preference number: 4 (lower is better)
Translates to: GVTCGTKKPTTKQLCGLKLRLWM*LVSWVM
Trigger: CATCACCCAGCTCACCAAGCACATCCAGAGCCTCAA...TTTTAGCCCACATAACTGCTTTGTTGTTGGTTTCTTAGTTCCACAAGTTACTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR GCA 90 bp CCAAACAATGACAGAGATACAGGGTGCTTTATTTCAAAAGGGAGTTACAGTCTATTGAGGCTCTGGATGTaGTTGGTGAGCTGGGTGATG +
Preference number: 4 (lower is better)
Translates to: PNNDRDTGCFISKGSYSLLRLWM*LVSWVM
Trigger: CATCACCCAGCTCACCAAGCACATCCAGAGCCTCAA...TAGACTGTAACTCCCTTTTGAAATAAAGCACCCTGTATCTCTGTCATTGTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468696.1
CDS-3UTR GCA 90 bp TTTTACAGATTGATGTCATACCTGACAGCTACCATGTCCCATGAAACATCCCTACTGGGGACTGTGGGTTaGTCACACAACAGGTTTCTA +
Preference number: 4 (lower is better)
Translates to: FYRLMSYLTATMSHETSLLGTVG*SHNRFL
Trigger: TAGAAACCTGTTGTGTGAGCAACCCACAGTCCCCAG...TAGGGATGTTTCATGGGACATGGTAGCTGTCAGGTATGACATCAATCTGTAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR GCA 90 bp TGCTCACACAACAGGTTTCTAGGTGGACCTTTGGGAGCACTCCCTTGTTCTTCTGGTGTTGACAAGATTTaGTTGATAATTCTGTATCGG +
Preference number: 4 (lower is better)
Translates to: CSHNRFLGGPLGALPCSSGVDKI*LIILYR
Trigger: CCGATACAGAATTATCAAGCAAATCTTGTCAACACC...AGAAGAACAAGGGAGTGCTCCCAAAGGTCCACCTAGAAACCTGTTGTGTGAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR CCA 90 bp TTGATGTCATACCTGACAGCTACCATGTCCCATGAAACATCCCTAATACTGGCATTCAAAAGCATCCTTTaGCGAAATGGCAGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: LMSYLTATMSHETSLILAFKSIL*RNGSPL
Trigger: CAGAGGACTGCCATTTCGCCAAAGGATGCTTTTGAA...TGCCAGTATTAGGGATGTTTCATGGGACATGGTAGCTGTCAGGTATGACATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR CCA 90 bp GTTTGCAGTATATACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTCTGGTCCCCACAGAGTaGAGGTCTTCTGGTGCACTG +
Preference number: 4 (lower is better)
Translates to: VCSIYCHEGSFITLVLLCLVPTE*RSSGAL
Trigger: CAGTGCACCAGAAGACCTCCACTCTGTGGGGACCAG...ACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTATATACTGCAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR CCA 90 bp TTAGAATGTTGCATTGGACAAATCCTGAGTCTAAGCCAGTGTGGAAATTATATACTGGTCCCCACAGAGTaGAGGTCTTCTGGTGCACTG +
Preference number: 4 (lower is better)
Translates to: LECCIGQILSLSQCGNYILVPTE*RSSGAL
Trigger: CAGTGCACCAGAAGACCTCCACTCTGTGGGGACCAG...TATATAATTTCCACACTGGCTTAGACTCAGGATTTGTCCAATGCAACATTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR CCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCACTGGTCCCCACAGAGTaGAGGTCTTCTGGTGCACTG +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSLVPTE*RSSGAL
Trigger: CAGTGCACCAGAAGACCTCCACTCTGTGGGGACCAG...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTCTGGTCCCCACAGAGTaGAGGTCTTCTGGTGCACTG +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFLVPTE*RSSGAL
Trigger: CAGTGCACCAGAAGACCTCCACTCTGTGGGGACCAG...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CCA 90 bp GTTTGCAGTATATACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTGATAGAGCAGCCTGCTaGTCCCCACAGAGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: VCSIYCHEGSFITLVLLCDRAAC*SPQSGG
Trigger: ACCTCCACTCTGTGGGGACCAGCAGGCTGCTCTATC...ACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTATATACTGCAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR CCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCAGATAGAGCAGCCTGCTaGTCCCCACAGAGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSDRAAC*SPQSGG
Trigger: ACCTCCACTCTGTGGGGACCAGCAGGCTGCTCTATC...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTGATAGAGCAGCCTGCTaGTCCCCACAGAGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFDRAAC*SPQSGG
Trigger: ACCTCCACTCTGTGGGGACCAGCAGGCTGCTCTATC...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CCA 90 bp GCACTATTAGAATGTTGCATTGGACAAATCCTGAGTCTAAGCCAGTGTGGAAATTCGTGGCGACAGCAGTaGGTTATCACCATCAGTGAT +
Preference number: 4 (lower is better)
Translates to: ALLECCIGQILSLSQCGNSWRQQ*VITISD
Trigger: ATCACTGATGGTGATAACCCACTGCTGTCGCCACGA...ATTTCCACACTGGCTTAGACTCAGGATTTGTCCAATGCAACATTCTAATAGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR CCA 90 bp ATTACATGGGGCCAAACAATGACAGAGATACAGGGTGCTTTATTTCAAAAGGGATCGTGGCGACAGCAGTaGGTTATCACCATCAGTGAT +
Preference number: 4 (lower is better)
Translates to: ITWGQTMTEIQGALFQKGSWRQQ*VITISD
Trigger: ATCACTGATGGTGATAACCCACTGCTGTCGCCACGA...TCCCTTTTGAAATAAAGCACCCTGTATCTCTGTCATTGTTTGGCCCCATGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468696.1
CDS-3UTR CCA 90 bp TACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTGACATCCTGTTACTGGGTGATGGTCTGTaGCTCCTTGCCATCTCCACA +
Preference number: 4 (lower is better)
Translates to: YCHEGSFITLVLLCDILLLGDGL*LLAIST
Trigger: TGTGGAGATGGCAAGGAGCCACAGACCATCACCCAG...TAACAGGATGTCACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR CCA 90 bp TCTGCCATTGGTATCCTATCTTCCTTTTGTGGACTTCTTCCTGTTTGTTTAAAAATGTGCTTGGTGAGCTaGGTGATGGTCTGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: SAIGILSSFCGLLPVCLKMCLVS*VMVCGS
Trigger: GGAGCCACAGACCATCACCCAGCTCACCAAGCACAT...TTTTAAACAAACAGGAAGAAGTCCACAAAAGGAAGATAGGATACCAATGGCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR CCA 90 bp GGAGTAACTTGTGGAACTAAGAAACCAACAACAAAGCAGTTATGTGGGCTAAAACAACAGGTTTCTAGGTaGACCTTTGGGAGCACTCCC +
Preference number: 4 (lower is better)
Translates to: GVTCGTKKPTTKQLCGLKQQVSR*TFGSTP
Trigger: GGGAGTGCTCCCAAAGGTCCACCTAGAAACCTGTTG...TTTTAGCCCACATAACTGCTTTGTTGTTGGTTTCTTAGTTCCACAAGTTACTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR CCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTTCACACCTGTGCACCTaGAGCAGGAAGTCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFSHLCT*SRKSRP
Trigger: AGGCCTGGACTTCCTGCTCCAGGTGCACAGGTGTGA...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618427.4
ENST00000622363.4
3UTR CAA 72 bp TCTTCAAATTCTCTTAAGGCTTTCCGCAGTCTCTTCTaGTCAGCCCTAGTTTCTCGGAGATGGTCAAGAAGT +
Preference number: 4 (lower is better)
Translates to: SSNSLKAFRSLF*SALVSRRWSRS
Trigger: ACTTCTTGACCATCTCCGAGAAACTAGGGCTGACAAGAAGAGACTGCGGAAAGCCTTAAGAGAATTTGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489341.5
ENST00000622363.4
CDS-3UTR TCA 90 bp TCCCTAATACTGGCACTATTAGAATGTTGCATTGGACAAATCCTGAGTCTAAGCTTACAGTGGTGCTGCTaGAGGAATTATCCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: SLILALLECCIGQILSLSLQWCC*RNYPEG
Trigger: GCCTTCAGGATAATTCCTTCAGCAGCACCACTGTAA...GCTTAGACTCAGGATTTGTCCAATGCAACATTCTAATAGTGCCAGTATTAGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR TCA 90 bp GTTTGCAGTATATACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTACATGCTCTGTCTCCTaGCTTTCTCCGTGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: VCSIYCHEGSFITLVLLCTCSVS*LSPWLL
Trigger: GAGGAGCCACGGAGAAAGTCAGGAGACAGAGCATGT...ACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTATATACTGCAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR TCA 90 bp TGTTGCATTGGACAAATCCTGAGTCTAAGCCAGTGTGGAAATTATATACATTTTACATGCTCTGTCTCCTaGCTTTCTCCGTGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: CCIGQILSLSQCGNYIHFTCSVS*LSPWLL
Trigger: GAGGAGCCACGGAGAAAGTCAGGAGACAGAGCATGT...AAAATGTATATAATTTCCACACTGGCTTAGACTCAGGATTTGTCCAATGCAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR TCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCAACATGCTCTGTCTCCTaGCTTTCTCCGTGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSTCSVS*LSPWLL
Trigger: GAGGAGCCACGGAGAAAGTCAGGAGACAGAGCATGT...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR TCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTACATGCTCTGTCTCCTaGCTTTCTCCGTGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFTCSVS*LSPWLL
Trigger: GAGGAGCCACGGAGAAAGTCAGGAGACAGAGCATGT...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR TCA 90 bp GGCACTATTAGAATGTTGCATTGGACAAATCCTGAGTCTAAGCCAGTGTGGAAACTGTTTCTTGGCACTTaGAGGCATTGTTTTGTGGAC +
Preference number: 4 (lower is better)
Translates to: GTIRMLHWTNPESKPVWKLFLGT*RHCFVD
Trigger: GTCCACAAAACAATGCCTTCAAGTGCCAAGAAACAG...TTTCCACACTGGCTTAGACTCAGGATTTGTCCAATGCAACATTCTAATAGTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR TCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTATCTCTGGCTTTGGCTaGAGATGGAGCATCGTGGCG +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFISGFG*RWSIVA
Trigger: CGCCACGATGCTCCATCTTCAGCCAAAGCCAGAGAT...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR TCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCAATCTCTGGCTTTGGCTaGAGATGGAGCATCGTGGCG +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSISGFG*RWSIVA
Trigger: CGCCACGATGCTCCATCTTCAGCCAAAGCCAGAGAT...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR TCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCAGGCATCATAAACTGCTaGGTGCTGGGTGGAGATGGG +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSGIINC*VLGGDG
Trigger: CCCATCTCCACCCAGCACTCAGCAGTTTATGATGCC...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR TCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTGGCATCATAAACTGCTaGGTGCTGGGTGGAGATGGG +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFGIINC*VLGGDG
Trigger: CCCATCTCCACCCAGCACTCAGCAGTTTATGATGCC...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR TCA 90 bp TACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTGACATCCTGTTATCCGAATTTTCCGCTTaGGGCTCTGGATGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: YCHEGSFITLVLLCDILLSEFSA*GSGCAW
Trigger: CCAAGCACATCCAGAGCCTCAAGCGGAAAATTCGGA...TAACAGGATGTCACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR TCA 90 bp ACATGGGGCCAAACAATGACAGAGATACAGGGTGCTTTATTTCAAAAGGGAGTTAGTCTTGTCACCATGTaGAGGCCGGTATTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: TWGQTMTEIQGALFQKGVSLVTM*RPVFLF
Trigger: GAAAAGAAATACCGGCCTTCACATGGTGACAAGACT...AACTCCCTTTTGAAATAAAGCACCCTGTATCTCTGTCATTGTTTGGCCCCATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000468696.1
CDS-3UTR TCA 90 bp AGGTTTATTACATGGGGCCAAACAATGACAGAGATACAGGGTGCTTTATTTCAACATGGGGCCAAACAATaGCAGAGATACAGGGTGCTT +
Preference number: 4 (lower is better)
Translates to: RFITWGQTMTEIQGALFQHGAKQ*QRYRVL
Trigger: AAGCACCCTGTATCTCTGTCATTGTTTGGCCCCATG...TTGAAATAAAGCACCCTGTATCTCTGTCATTGTTTGGCCCCATGTAATAAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468696.1
CDS-3UTR GCA 90 bp TACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTGACATCCTGTTACTGTCGGCCTCATTCTaGCCATCTTTGTGGACTGGT +
Preference number: 4 (lower is better)
Translates to: YCHEGSFITLVLLCDILLLSASF*PSLWTG
Trigger: ACCAGTCCACAAAGATGGGCAGAATGAGGCCGACAG...TAACAGGATGTCACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR GCA 90 bp TGTTGCATTGGACAAATCCTGAGTCTAAGCCAGTGTGGAAATTATATACATTTTGTGGAGGTCTTCTGGTaGACTGTCGGCCTCATTCTG +
Preference number: 4 (lower is better)
Translates to: CCIGQILSLSQCGNYIHFVEVFW*TVGLIL
Trigger: CAGAATGAGGCCGACAGTGCACCAGAAGACCTCCAC...AAAATGTATATAATTTCCACACTGGCTTAGACTCAGGATTTGTCCAATGCAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR GCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCAGTGGAGGTCTTCTGGTaGACTGTCGGCCTCATTCTG +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSVEVFW*TVGLIL
Trigger: CAGAATGAGGCCGACAGTGCACCAGAAGACCTCCAC...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR GCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTGTGGAGGTCTTCTGGTaGACTGTCGGCCTCATTCTG +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFVEVFW*TVGLIL
Trigger: CAGAATGAGGCCGACAGTGCACCAGAAGACCTCCAC...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR GCA 90 bp GCACTATTAGAATGTTGCATTGGACAAATCCTGAGTCTAAGCCAGTGTGGAAATGTGAGATGCTGGATCTaGCAAAGAAGGTTGTTGGCT +
Preference number: 4 (lower is better)
Translates to: ALLECCIGQILSLSQCGNVRCWI*QRRLLA
Trigger: AGCCAACAACCTTCTTTGGCAGATCCAGCATCTCAC...ATTTCCACACTGGCTTAGACTCAGGATTTGTCCAATGCAACATTCTAATAGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR GCA 90 bp AATACTGGCACTATTAGAATGTTGCATTGGACAAATCCTGAGTCTAAGCCAGTGAACAGGAAGGTGAGATaGTGGATCTGCCAAAGAAGG +
Preference number: 4 (lower is better)
Translates to: NTGTIRMLHWTNPESKPVNRKVR*WICQRR
Trigger: CCTTCTTTGGCAGATCCAGCATCTCACCTTCCTGTT...CACTGGCTTAGACTCAGGATTTGTCCAATGCAACATTCTAATAGTGCCAGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR GCA 90 bp TTTCTTTGTAAGGAGGTTTATTACATGGGGCCAAACAATGACAGAGATACAGGGAAGCAGAAAACAAGGTaGAAGAGGGCACAGGTGGAA +
Preference number: 4 (lower is better)
Translates to: FLCKEVYYMGPNNDRDTGKQKTR*KRAQVE
Trigger: TTCCACCTGTGCCCTCTTGCACCTTGTTTTCTGCTT...CCCTGTATCTCTGTCATTGTTTGGCCCCATGTAATAAACCTCCTTACAAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468696.1
CDS-3UTR GCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCAGCCTCATCTTCGGCCTaGAGATGCACACTTTGGCAC +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSASSSA*RCTLWH
Trigger: GTGCCAAAGTGTGCATCTGCAGGCCGAAGATGAGGC...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618427.4
ENST00000622363.4
CDS-3UTR GCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCATCTTCGTCACACCTGTaGACCTGGAGCAGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSSSSHL*TWSRKS
Trigger: GGACTTCCTGCTCCAGGTGCACAGGTGTGACGAAGA...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618427.4
ENST00000622363.4
CDS-3UTR GCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTAGCCGTCTCCCTGATTaGTCTCCGGGAGTTAGAGCA +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFSRLPD*SPGVRA
Trigger: TGCTCTAACTCCCGGAGAGCAATCAGGGAGACGGCT...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR GCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCAAGCCGTCTCCCTGATTaGTCTCCGGGAGTTAGAGCA +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSSRLPD*SPGVRA
Trigger: TGCTCTAACTCCCGGAGAGCAATCAGGGAGACGGCT...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CCA 90 bp TACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTGACATCCTGTTATGGACTCTCATGAGCTaGTGTTCCTGCTCTCACCTG +
Preference number: 4 (lower is better)
Translates to: YCHEGSFITLVLLCDILLWTLMS*CSCSHL
Trigger: CAGGTGAGAGCAGGAACACCAGCTCATGAGAGTCCA...TAACAGGATGTCACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR CCA 90 bp TACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTGACATCCTGTTAAGAGTGGAGGTCTTCTaGTGCACTGTCGGCCTCATT +
Preference number: 4 (lower is better)
Translates to: YCHEGSFITLVLLCDILLRVEVF*CTVGLI
Trigger: AATGAGGCCGACAGTGCACCAGAAGACCTCCACTCT...TAACAGGATGTCACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR CCA 90 bp TACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTGACATCCTGTTAGAAGATGGAGCATCGTaGCGACAGCAGTGGGTTATC +
Preference number: 4 (lower is better)
Translates to: YCHEGSFITLVLLCDILLEDGAS*RQQWVI
Trigger: GATAACCCACTGCTGTCGCCACGATGCTCCATCTTC...TAACAGGATGTCACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR CCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCACTGGGTGATGGTCTGTaGCTCCTTGCCATCTCCACA +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSLGDGL*LLAIST
Trigger: TGTGGAGATGGCAAGGAGCCACAGACCATCACCCAG...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTCTGGGTGATGGTCTGTaGCTCCTTGCCATCTCCACA +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFLGDGL*LLAIST
Trigger: TGTGGAGATGGCAAGGAGCCACAGACCATCACCCAG...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CCA 90 bp GTTTGCAGTATATACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTATGTGCTTGGTGAGCTaGGTGATGGTCTGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: VCSIYCHEGSFITLVLLCMCLVS*VMVCGS
Trigger: GGAGCCACAGACCATCACCCAGCTCACCAAGCACAT...ACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTATATACTGCAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR CCA 90 bp TGTTGCATTGGACAAATCCTGAGTCTAAGCCAGTGTGGAAATTATATACATTTTATGTGCTTGGTGAGCTaGGTGATGGTCTGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: CCIGQILSLSQCGNYIHFMCLVS*VMVCGS
Trigger: GGAGCCACAGACCATCACCCAGCTCACCAAGCACAT...AAAATGTATATAATTTCCACACTGGCTTAGACTCAGGATTTGTCCAATGCAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR CCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTATGTGCTTGGTGAGCTaGGTGATGGTCTGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFMCLVS*VMVCGS
Trigger: GGAGCCACAGACCATCACCCAGCTCACCAAGCACAT...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCAATGTGCTTGGTGAGCTaGGTGATGGTCTGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSMCLVS*VMVCGS
Trigger: GGAGCCACAGACCATCACCCAGCTCACCAAGCACAT...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CCA 90 bp GTTTGCAGTATATACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTTTCCGCTTGAGGCTCTaGATGTGCTTGGTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: VCSIYCHEGSFITLVLLCFRLRL*MCLVSW
Trigger: CCAGCTCACCAAGCACATCCAGAGCCTCAAGCGGAA...ACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTATATACTGCAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR CCA 90 bp TGTTGCATTGGACAAATCCTGAGTCTAAGCCAGTGTGGAAATTATATACATTTTTTCCGCTTGAGGCTCTaGATGTGCTTGGTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: CCIGQILSLSQCGNYIHFFRLRL*MCLVSW
Trigger: CCAGCTCACCAAGCACATCCAGAGCCTCAAGCGGAA...AAAATGTATATAATTTCCACACTGGCTTAGACTCAGGATTTGTCCAATGCAACA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR CCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTTTCCGCTTGAGGCTCTaGATGTGCTTGGTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFFRLRL*MCLVSW
Trigger: CCAGCTCACCAAGCACATCCAGAGCCTCAAGCGGAA...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCATTCCGCTTGAGGCTCTaGATGTGCTTGGTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSFRLRL*MCLVSW
Trigger: CCAGCTCACCAAGCACATCCAGAGCCTCAAGCGGAA...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CCA 90 bp TACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTGACATCCTGTTACAACAGGTTTCTAGGTaGACCTTTGGGAGCACTCCC +
Preference number: 4 (lower is better)
Translates to: YCHEGSFITLVLLCDILLQQVSR*TFGSTP
Trigger: GGGAGTGCTCCCAAAGGTCCACCTAGAAACCTGTTG...TAACAGGATGTCACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR CCA 90 bp TCCCTAATACTGGCACTATTAGAATGTTGCATTGGACAAATCCTGAGTCTAAGCACCTTAGAATCCTCCTaGGGAGGAAGTTGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: SLILALLECCIGQILSLSTLESS*GGSCSL
Trigger: AAGAGAGCAACTTCCTCCCCAGGAGGATTCTAAGGT...GCTTAGACTCAGGATTTGTCCAATGCAACATTCTAATAGTGCCAGTATTAGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR CCA 90 bp TCTGCCATTGGTATCCTATCTTCCTTTTGTGGACTTCTTCCTGTTTGTTTAAAAGCCAAAGAAGGTTGTTaGCTTCCCTGTGGACGGTCT +
Preference number: 4 (lower is better)
Translates to: SAIGILSSFCGLLPVCLKAKEGC*LPCGRS
Trigger: AGACCGTCCACAGGGAAGCCAACAACCTTCTTTGGC...TTTTAAACAAACAGGAAGAAGTCCACAAAAGGAAGATAGGATACCAATGGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489341.5
ENST00000622363.4
3UTR CAA 72 bp TGTTCAAATTTTTCTTCAAATTTCCGAATTTTCCGCTaGAGGCTCTGGATGTGCTTGGTGAGCTGGGTGATG +
Preference number: 4 (lower is better)
Translates to: CSNFSSNFRIFR*RLWMCLVSWVM
Trigger: CATCACCCAGCTCACCAAGCACATCCAGAGCCTCAAGCGGAAAATTCGGAAATTTGAAGAAAAATTTGAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR TCA 90 bp AATACTGGCACTATTAGAATGTTGCATTGGACAAATCCTGAGTCTAAGCCAGTGTGGTCTATTCTTGGTTaGAGTCGCACTGTTTCTTGG +
Preference number: 4 (lower is better)
Translates to: NTGTIRMLHWTNPESKPVWSILG*SRTVSW
Trigger: CCAAGAAACAGTGCGACTTCAACCAAGAATAGACCA...CACTGGCTTAGACTCAGGATTTGTCCAATGCAACATTCTAATAGTGCCAGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR TCA 90 bp TACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTGACATCCTGTTAGGTTATCACCATCAGTaGTGTGATAGAGCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: YCHEGSFITLVLLCDILLGYHHQ*CDRAAC
Trigger: GCAGGCTGCTCTATCACATCACTGATGGTGATAACC...TAACAGGATGTCACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR TCA 90 bp GTTTATTACATGGGGCCAAACAATGACAGAGATACAGGGTGCTTTATTTCAAAAGGTTATCACCATCAGTaGTGTGATAGAGCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: VYYMGPNNDRDTGCFISKGYHHQ*CDRAAC
Trigger: GCAGGCTGCTCTATCACATCACTGATGGTGATAACC...TTTTGAAATAAAGCACCCTGTATCTCTGTCATTGTTTGGCCCCATGTAATAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468696.1
CDS-3UTR TCA 90 bp TTAGAATGTTGCATTGGACAAATCCTGAGTCTAAGCCAGTGTGGAAATTATATATCCGAATTTTCCGCTTaGGGCTCTGGATGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: LECCIGQILSLSQCGNYISEFSA*GSGCAW
Trigger: CCAAGCACATCCAGAGCCTCAAGCGGAAAATTCGGA...TATATAATTTCCACACTGGCTTAGACTCAGGATTTGTCCAATGCAACATTCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR TCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTTCCGAATTTTCCGCTTaGGGCTCTGGATGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFSEFSA*GSGCAW
Trigger: CCAAGCACATCCAGAGCCTCAAGCGGAAAATTCGGA...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR TCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCATCCGAATTTTCCGCTTaGGGCTCTGGATGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSSEFSA*GSGCAW
Trigger: CCAAGCACATCCAGAGCCTCAAGCGGAAAATTCGGA...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR TCA 90 bp TCCCTAATACTGGCACTATTAGAATGTTGCATTGGACAAATCCTGAGTCTAAGCAGTCTTGTCACCATGTaGAGGCCGGTATTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: SLILALLECCIGQILSLSSLVTM*RPVFLF
Trigger: GAAAAGAAATACCGGCCTTCACATGGTGACAAGACT...GCTTAGACTCAGGATTTGTCCAATGCAACATTCTAATAGTGCCAGTATTAGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR GCA 90 bp GTTTGCAGTATATACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTTTCTACCAGAGCCCCTaGGTCGGGGTAGTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: VCSIYCHEGSFITLVLLCFYQSP*VGVVLF
Trigger: AAAGAGAACTACCCCGACGCAGGGGCTCTGGTAGAA...ACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTATATACTGCAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR GCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCATTCTACCAGAGCCCCTaGGTCGGGGTAGTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSFYQSP*VGVVLF
Trigger: AAAGAGAACTACCCCGACGCAGGGGCTCTGGTAGAA...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR GCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTTTCTACCAGAGCCCCTaGGTCGGGGTAGTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFFYQSP*VGVVLF
Trigger: AAAGAGAACTACCCCGACGCAGGGGCTCTGGTAGAA...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR GCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCACTGTCGGCCTCATTCTaGCCATCTTTGTGGACTGGT +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSLSASF*PSLWTG
Trigger: ACCAGTCCACAAAGATGGGCAGAATGAGGCCGACAG...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR GCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTCTGTCGGCCTCATTCTaGCCATCTTTGTGGACTGGT +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFLSASF*PSLWTG
Trigger: ACCAGTCCACAAAGATGGGCAGAATGAGGCCGACAG...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR GCA 90 bp GTTTGCAGTATATACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTTTGAGGCTCTGGATGTaGTTGGTGAGCTGGGTGATG +
Preference number: 4 (lower is better)
Translates to: VCSIYCHEGSFITLVLLCLRLWM*LVSWVM
Trigger: CATCACCCAGCTCACCAAGCACATCCAGAGCCTCAA...ACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTATATACTGCAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR GCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCATTGAGGCTCTGGATGTaGTTGGTGAGCTGGGTGATG +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSLRLWM*LVSWVM
Trigger: CATCACCCAGCTCACCAAGCACATCCAGAGCCTCAA...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR GCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTTTGAGGCTCTGGATGTaGTTGGTGAGCTGGGTGATG +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFLRLWM*LVSWVM
Trigger: CATCACCCAGCTCACCAAGCACATCCAGAGCCTCAA...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR GCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTTCTTCGGCCTGCAGATaGACACTTTGGCACACCTCT +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFSSACR*TLWHTS
Trigger: AGAGGTGTGCCAAAGTGTGCATCTGCAGGCCGAAGA...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618427.4
ENST00000622363.4
CDS-3UTR CCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCATGGACTCTCATGAGCTaGTGTTCCTGCTCTCACCTG +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSWTLMS*CSCSHL
Trigger: CAGGTGAGAGCAGGAACACCAGCTCATGAGAGTCCA...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTTGGACTCTCATGAGCTaGTGTTCCTGCTCTCACCTG +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFWTLMS*CSCSHL
Trigger: CAGGTGAGAGCAGGAACACCAGCTCATGAGAGTCCA...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CCA 90 bp GTTTGCAGTATATACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTTTCTGCCCATCTTTGTaGACTGGTGAGGGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: VCSIYCHEGSFITLVLLCFCPSL*TGEGSA
Trigger: TGCAGACCCCTCACCAGTCCACAAAGATGGGCAGAA...ACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTATATACTGCAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR CCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTTTCTGCCCATCTTTGTaGACTGGTGAGGGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFFCPSL*TGEGSA
Trigger: TGCAGACCCCTCACCAGTCCACAAAGATGGGCAGAA...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCATTCTGCCCATCTTTGTaGACTGGTGAGGGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSFCPSL*TGEGSA
Trigger: TGCAGACCCCTCACCAGTCCACAAAGATGGGCAGAA...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTAGAGTGGAGGTCTTCTaGTGCACTGTCGGCCTCATT +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFRVEVF*CTVGLI
Trigger: AATGAGGCCGACAGTGCACCAGAAGACCTCCACTCT...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCAAGAGTGGAGGTCTTCTaGTGCACTGTCGGCCTCATT +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSRVEVF*CTVGLI
Trigger: AATGAGGCCGACAGTGCACCAGAAGACCTCCACTCT...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTGAAGATGGAGCATCGTaGCGACAGCAGTGGGTTATC +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFEDGAS*RQQWVI
Trigger: GATAACCCACTGCTGTCGCCACGATGCTCCATCTTC...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTCAACAGGTTTCTAGGTaGACCTTTGGGAGCACTCCC +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFQQVSR*TFGSTP
Trigger: GGGAGTGCTCCCAAAGGTCCACCTAGAAACCTGTTG...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CCA 90 bp TCCTCAATTGTTGGAATAAGGGAAGGTGTTGACAAGATTTGCTTGATAATTCTGTGTCAAGGCAGCATCTaGAGTCTCTTCTCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: SSIVGIREGVDKICLIILCQGSI*SLFSRG
Trigger: TCCTCTGGAGAAGAGACTCCAGATGCTGCCTTGACA...CAGAATTATCAAGCAAATCTTGTCAACACCTTCCCTTATTCCAACAATTGAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR CCA 90 bp TGTTGCATTGGACAAATCCTGAGTCTAAGCCAGTGTGGAAATTATATACATTTTGCCAAAGAAGGTTGTTaGCTTCCCTGTGGACGGTCT +
Preference number: 4 (lower is better)
Translates to: CCIGQILSLSQCGNYIHFAKEGC*LPCGRS
Trigger: AGACCGTCCACAGGGAAGCCAACAACCTTCTTTGGC...AAAATGTATATAATTTCCACACTGGCTTAGACTCAGGATTTGTCCAATGCAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR CCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCAGCCAAAGAAGGTTGTTaGCTTCCCTGTGGACGGTCT +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSAKEGC*LPCGRS
Trigger: AGACCGTCCACAGGGAAGCCAACAACCTTCTTTGGC...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTGCCAAAGAAGGTTGTTaGCTTCCCTGTGGACGGTCT +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFAKEGC*LPCGRS
Trigger: AGACCGTCCACAGGGAAGCCAACAACCTTCTTTGGC...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CCA 90 bp GGAGTAACTTGTGGAACTAAGAAACCAACAACAAAGCAGTTATGTGGGCTAAAAAGGAAGGTGAGATGCTaGATCTGCCAAAGAAGGTTG +
Preference number: 4 (lower is better)
Translates to: GVTCGTKKPTTKQLCGLKRKVRC*ICQRRL
Trigger: CAACCTTCTTTGGCAGATCCAGCATCTCACCTTCCT...TTTTAGCCCACATAACTGCTTTGTTGTTGGTTTCTTAGTTCCACAAGTTACTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR CCA 90 bp AATACTGGCACTATTAGAATGTTGCATTGGACAAATCCTGAGTCTAAGCCAGTGCTAGTTTCTCGGAGATaGTCAAGAAGTACAGGCATG +
Preference number: 4 (lower is better)
Translates to: NTGTIRMLHWTNPESKPVLVSRR*SRSTGM
Trigger: CATGCCTGTACTTCTTGACCATCTCCGAGAAACTAG...CACTGGCTTAGACTCAGGATTTGTCCAATGCAACATTCTAATAGTGCCAGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR TCA 90 bp GTTTGCAGTATATACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTTTTTGTGGACTCTCATaGGCTGGTGTTCCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: VCSIYCHEGSFITLVLLCFCGLS*AGVPAL
Trigger: GAGAGCAGGAACACCAGCTCATGAGAGTCCACAAAA...ACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTATATACTGCAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR TCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCATTTTGTGGACTCTCATaGGCTGGTGTTCCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSFCGLS*AGVPAL
Trigger: GAGAGCAGGAACACCAGCTCATGAGAGTCCACAAAA...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR TCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTTTTTGTGGACTCTCATaGGCTGGTGTTCCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFFCGLS*AGVPAL
Trigger: GAGAGCAGGAACACCAGCTCATGAGAGTCCACAAAA...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
41% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR TCA 90 bp GTTTGCAGTATATACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTATCTTTGTGGACTGGTaGGGGGTCTGCAGAATCTGT +
Preference number: 4 (lower is better)
Translates to: VCSIYCHEGSFITLVLLCIFVDW*GVCRIC
Trigger: ACAGATTCTGCAGACCCCTCACCAGTCCACAAAGAT...ACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTATATACTGCAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR TCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCAATCTTTGTGGACTGGTaGGGGGTCTGCAGAATCTGT +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSIFVDW*GVCRIC
Trigger: ACAGATTCTGCAGACCCCTCACCAGTCCACAAAGAT...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR TCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTATCTTTGTGGACTGGTaGGGGGTCTGCAGAATCTGT +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFIFVDW*GVCRIC
Trigger: ACAGATTCTGCAGACCCCTCACCAGTCCACAAAGAT...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR TCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCAGGTTATCACCATCAGTaGTGTGATAGAGCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSGYHHQ*CDRAAC
Trigger: GCAGGCTGCTCTATCACATCACTGATGGTGATAACC...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR TCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTGGTTATCACCATCAGTaGTGTGATAGAGCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFGYHHQ*CDRAAC
Trigger: GCAGGCTGCTCTATCACATCACTGATGGTGATAACC...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR TCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCATCACCAACAGGAAGGTaGGATGCTGGATCTGCCAAA +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSSPTGR*DAGSAK
Trigger: TTTGGCAGATCCAGCATCTCACCTTCCTGTTGGTGA...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR TCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTTCACCAACAGGAAGGTaGGATGCTGGATCTGCCAAA +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFSPTGR*DAGSAK
Trigger: TTTGGCAGATCCAGCATCTCACCTTCCTGTTGGTGA...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR TCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCATTGACTCCATGCACCTaGGCAGCTTCTTCCTGGTTT +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSLTPCT*AASSWF
Trigger: AAACCAGGAAGAAGCTGCTCAGGTGCATGGAGTCAA...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614220.4
ENST00000621119.4
CDS-3UTR TCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTTTGACTCCATGCACCTaGGCAGCTTCTTCCTGGTTT +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFLTPCT*AASSWF
Trigger: AAACCAGGAAGAAGCTGCTCAGGTGCATGGAGTCAA...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000614220.4
ENST00000621119.4
CDS-3UTR TCA 90 bp ACTCTGTTTAGAATCGGCTGTAACATTCGGCTCAAAAATTGTAGAACATTAAAGGTAGGGTATGTATTCTaGCTTTCTCCGTGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: TLFRIGCNIRLKNCRTLKVGYVF*LSPWLL
Trigger: GAGGAGCCACGGAGAAAGTCAGAATACATACCCTAC...CTTTAATGTTCTACAATTTTTGAGCCGAATGTTACAGCCGATTCTAAACAGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000619059.4
CDS-3UTR GCA 90 bp TCCCTAATACTGGCACTATTAGAATGTTGCATTGGACAAATCCTGAGTCTAAGCTCCTCATTTAAGTCCTaGCGAGTTTCAAAAGCATCC +
Preference number: 4 (lower is better)
Translates to: SLILALLECCIGQILSLSSSFKS*RVSKAS
Trigger: GGATGCTTTTGAAACTCGGCAGGACTTAAATGAGGA...GCTTAGACTCAGGATTTGTCCAATGCAACATTCTAATAGTGCCAGTATTAGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR GCA 90 bp GTTTGCAGTATATACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTCTGGGGACTGTGGGTTaGTCACACAACAGGTTTCTA +
Preference number: 4 (lower is better)
Translates to: VCSIYCHEGSFITLVLLCLGTVG*SHNRFL
Trigger: TAGAAACCTGTTGTGTGAGCAACCCACAGTCCCCAG...ACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTATATACTGCAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR GCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTCTGGGGACTGTGGGTTaGTCACACAACAGGTTTCTA +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFLGTVG*SHNRFL
Trigger: TAGAAACCTGTTGTGTGAGCAACCCACAGTCCCCAG...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR GCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCACTGGGGACTGTGGGTTaGTCACACAACAGGTTTCTA +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSLGTVG*SHNRFL
Trigger: TAGAAACCTGTTGTGTGAGCAACCCACAGTCCCCAG...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR GCA 90 bp TTGATGTCATACCTGACAGCTACCATGTCCCATGAAACATCCCTAATACTGGCAATGAGGTTCTTGTCTTaGTTAGTTACCTTAGAATCC +
Preference number: 4 (lower is better)
Translates to: LMSYLTATMSHETSLILAMRFLS*LVTLES
Trigger: GGATTCTAAGGTAACTAAGCAAGACAAGAACCTCAT...TGCCAGTATTAGGGATGTTTCATGGGACATGGTAGCTGTCAGGTATGACATCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR GCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCAACACAAACATGGCATTaGAAGGCAAGTCTCCGGGCT +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSTQTWH*KASLRA
Trigger: AGCCCGGAGACTTGCCTTGCAATGCCATGTTTGTGT...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611933.4
ENST00000618427.4
ENST00000621119.4
ENST00000622363.4
CDS-3UTR GCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTACACAAACATGGCATTaGAAGGCAAGTCTCCGGGCT +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFTQTWH*KASLRA
Trigger: AGCCCGGAGACTTGCCTTGCAATGCCATGTTTGTGT...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611933.4
ENST00000618427.4
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CCA 90 bp AATACTGGCACTATTAGAATGTTGCATTGGACAAATCCTGAGTCTAAGCCAGTGAGTCGCACTGTTTCTTaGCACTTGAAGGCATTGTTT +
Preference number: 4 (lower is better)
Translates to: NTGTIRMLHWTNPESKPVSRTVS*HLKALF
Trigger: AAACAATGCCTTCAAGTGCCAAGAAACAGTGCGACT...CACTGGCTTAGACTCAGGATTTGTCCAATGCAACATTCTAATAGTGCCAGTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR CCA 90 bp GTTTGCAGTATATACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTTCGTGGCGACAGCAGTaGGTTATCACCATCAGTGAT +
Preference number: 4 (lower is better)
Translates to: VCSIYCHEGSFITLVLLCSWRQQ*VITISD
Trigger: ATCACTGATGGTGATAACCCACTGCTGTCGCCACGA...ACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTATATACTGCAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR CCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTTCGTGGCGACAGCAGTaGGTTATCACCATCAGTGAT +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFSWRQQ*VITISD
Trigger: ATCACTGATGGTGATAACCCACTGCTGTCGCCACGA...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCATCGTGGCGACAGCAGTaGGTTATCACCATCAGTGAT +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSSWRQQ*VITISD
Trigger: ATCACTGATGGTGATAACCCACTGCTGTCGCCACGA...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CCA 90 bp GGAGTAACTTGTGGAACTAAGAAACCAACAACAAAGCAGTTATGTGGGCTAAAATTGAATCTCTGGCTTTaGCTGAAGATGGAGCATCGT +
Preference number: 4 (lower is better)
Translates to: GVTCGTKKPTTKQLCGLKLNLWL*LKMEHR
Trigger: ACGATGCTCCATCTTCAGCCAAAGCCAGAGATTCAA...TTTTAGCCCACATAACTGCTTTGTTGTTGGTTTCTTAGTTCCACAAGTTACTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR CCA 90 bp AGGTTTATTACATGGGGCCAAACAATGACAGAGATACAGGGTGCTTTATTTCAATTGAATCTCTGGCTTTaGCTGAAGATGGAGCATCGT +
Preference number: 4 (lower is better)
Translates to: RFITWGQTMTEIQGALFQLNLWL*LKMEHR
Trigger: ACGATGCTCCATCTTCAGCCAAAGCCAGAGATTCAA...TTGAAATAAAGCACCCTGTATCTCTGTCATTGTTTGGCCCCATGTAATAAACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468696.1
CDS-3UTR CCA 90 bp GTTTGCAGTATATACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTGTTTCCCATTTTCTCTaGGGACTGTGGGTTGCTCAC +
Preference number: 4 (lower is better)
Translates to: VCSIYCHEGSFITLVLLCVSHFL*GLWVAH
Trigger: GTGAGCAACCCACAGTCCCCAGAGAAAATGGGAAAC...ACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTATATACTGCAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR CCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCAGTTTCCCATTTTCTCTaGGGACTGTGGGTTGCTCAC +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSVSHFL*GLWVAH
Trigger: GTGAGCAACCCACAGTCCCCAGAGAAAATGGGAAAC...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTGTTTCCCATTTTCTCTaGGGACTGTGGGTTGCTCAC +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFVSHFL*GLWVAH
Trigger: GTGAGCAACCCACAGTCCCCAGAGAAAATGGGAAAC...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CCA 90 bp GTTTGCAGTATATACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTTGTCAAGGCAGCATCTaGAGTCTCTTCTCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: VCSIYCHEGSFITLVLLCCQGSI*SLFSRG
Trigger: TCCTCTGGAGAAGAGACTCCAGATGCTGCCTTGACA...ACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTATATACTGCAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR CCA 90 bp TTAGAATGTTGCATTGGACAAATCCTGAGTCTAAGCCAGTGTGGAAATTATATATGTCAAGGCAGCATCTaGAGTCTCTTCTCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: LECCIGQILSLSQCGNYICQGSI*SLFSRG
Trigger: TCCTCTGGAGAAGAGACTCCAGATGCTGCCTTGACA...TATATAATTTCCACACTGGCTTAGACTCAGGATTTGTCCAATGCAACATTCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR CCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCATGTCAAGGCAGCATCTaGAGTCTCTTCTCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSCQGSI*SLFSRG
Trigger: TCCTCTGGAGAAGAGACTCCAGATGCTGCCTTGACA...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTTGTCAAGGCAGCATCTaGAGTCTCTTCTCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFCQGSI*SLFSRG
Trigger: TCCTCTGGAGAAGAGACTCCAGATGCTGCCTTGACA...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CCA 90 bp TACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTGACATCCTGTTAACCTTAGAATCCTCCTaGGGAGGAAGTTGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: YCHEGSFITLVLLCDILLTLESS*GGSCSL
Trigger: AAGAGAGCAACTTCCTCCCCAGGAGGATTCTAAGGT...TAACAGGATGTCACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR CCA 90 bp TTAGAATGTTGCATTGGACAAATCCTGAGTCTAAGCCAGTGTGGAAATTATATATTGTTGGCTTCCCTGTaGACGGTCTTCATCAGAGTC +
Preference number: 4 (lower is better)
Translates to: LECCIGQILSLSQCGNYILLASL*TVFIRV
Trigger: GACTCTGATGAAGACCGTCCACAGGGAAGCCAACAA...TATATAATTTCCACACTGGCTTAGACTCAGGATTTGTCCAATGCAACATTCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR CCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTTTGTTGGCTTCCCTGTaGACGGTCTTCATCAGAGTC +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFLLASL*TVFIRV
Trigger: GACTCTGATGAAGACCGTCCACAGGGAAGCCAACAA...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCATTGTTGGCTTCCCTGTaGACGGTCTTCATCAGAGTC +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSLLASL*TVFIRV
Trigger: GACTCTGATGAAGACCGTCCACAGGGAAGCCAACAA...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR TCA 90 bp AATACTGGCACTATTAGAATGTTGCATTGGACAAATCCTGAGTCTAAGCCAGTGCTGAAGGAATTATCCTaGAGGCTGAAACAGAAACAA +
Preference number: 4 (lower is better)
Translates to: NTGTIRMLHWTNPESKPVLKELS*RLKQKQ
Trigger: TTGTTTCTGTTTCAGCCTTCAGGATAATTCCTTCAG...CACTGGCTTAGACTCAGGATTTGTCCAATGCAACATTCTAATAGTGCCAGTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR TCA 90 bp GTTTGCAGTATATACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTTTACAGTGGTGCTGCTaGAGGAATTATCCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: VCSIYCHEGSFITLVLLCLQWCC*RNYPEG
Trigger: GCCTTCAGGATAATTCCTTCAGCAGCACCACTGTAA...ACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTATATACTGCAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR TCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTTTACAGTGGTGCTGCTaGAGGAATTATCCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFLQWCC*RNYPEG
Trigger: GCCTTCAGGATAATTCCTTCAGCAGCACCACTGTAA...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR TCA 90 bp TACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTGACATCCTGTTATGGTCTATTCTTGGTTaGAGTCGCACTGTTTCTTGG +
Preference number: 4 (lower is better)
Translates to: YCHEGSFITLVLLCDILLWSILG*SRTVSW
Trigger: CCAAGAAACAGTGCGACTTCAACCAAGAATAGACCA...TAACAGGATGTCACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR TCA 90 bp TACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTGACATCCTGTTAAGTCTTGTCACCATGTaGAGGCCGGTATTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: YCHEGSFITLVLLCDILLSLVTM*RPVFLF
Trigger: GAAAAGAAATACCGGCCTTCACATGGTGACAAGACT...TAACAGGATGTCACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR GCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCAGTGAGATGCTGGATCTaGCAAAGAAGGTTGTTGGCT +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSVRCWI*QRRLLA
Trigger: AGCCAACAACCTTCTTTGGCAGATCCAGCATCTCAC...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR GCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTGTGAGATGCTGGATCTaGCAAAGAAGGTTGTTGGCT +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFVRCWI*QRRLLA
Trigger: AGCCAACAACCTTCTTTGGCAGATCCAGCATCTCAC...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR GCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTAACAGGAAGGTGAGATaGTGGATCTGCCAAAGAAGG +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFNRKVR*WICQRR
Trigger: CCTTCTTTGGCAGATCCAGCATCTCACCTTCCTGTT...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR GCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCAAACAGGAAGGTGAGATaGTGGATCTGCCAAAGAAGG +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSNRKVR*WICQRR
Trigger: CCTTCTTTGGCAGATCCAGCATCTCACCTTCCTGTT...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR GCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCAGTTTTGGCCACATCTTaGTTGCTGATGAGGACCTCT +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSVLATS*LLMRTS
Trigger: AGAGGTCCTCATCAGCAAGCAAGATGTGGCCAAAAC...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR GCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTGTTTTGGCCACATCTTaGTTGCTGATGAGGACCTCT +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFVLATS*LLMRTS
Trigger: AGAGGTCCTCATCAGCAAGCAAGATGTGGCCAAAAC...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR GCA 90 bp TTTCTTTGTAAGGAGGTTTATTACATGGGGCCAAACAATGACAGAGATACAGGGGACAGAGATACAGGGTaGTTTATTTCAAAAGGGAGT +
Preference number: 4 (lower is better)
Translates to: FLCKEVYYMGPNNDRDTGDRDTG*FISKGS
Trigger: ACTCCCTTTTGAAATAAAGCACCCTGTATCTCTGTC...CCCTGTATCTCTGTCATTGTTTGGCCCCATGTAATAAACCTCCTTACAAAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000468696.1
CDS-3UTR GCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTTCAGATTCGAGGGCTTaGAGCTTCAGCAAGGAATTC +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFSDSRA*SFSKEF
Trigger: GAATTCCTTGCTGAAGCTGCAAGCCCTCGAATCTGA...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000614220.4
ENST00000621119.4
CDS-3UTR GCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCATCAGATTCGAGGGCTTaGAGCTTCAGCAAGGAATTC +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSSDSRA*SFSKEF
Trigger: GAATTCCTTGCTGAAGCTGCAAGCCCTCGAATCTGA...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614220.4
ENST00000621119.4
CDS-3UTR CCA 90 bp GTTTGCAGTATATACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTCATCCTTTGGCGAAATaGCAGTCCTCTGGTCTATTC +
Preference number: 4 (lower is better)
Translates to: VCSIYCHEGSFITLVLLCHPLAK*QSSGLF
Trigger: GAATAGACCAGAGGACTGCCATTTCGCCAAAGGATG...ACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTATATACTGCAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR CCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTCATCCTTTGGCGAAATaGCAGTCCTCTGGTCTATTC +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFHPLAK*QSSGLF
Trigger: GAATAGACCAGAGGACTGCCATTTCGCCAAAGGATG...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCACATCCTTTGGCGAAATaGCAGTCCTCTGGTCTATTC +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSHPLAK*QSSGLF
Trigger: GAATAGACCAGAGGACTGCCATTTCGCCAAAGGATG...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTACCTTAGAATCCTCCTaGGGAGGAAGTTGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFTLESS*GGSCSL
Trigger: AAGAGAGCAACTTCCTCCCCAGGAGGATTCTAAGGT...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCAACCTTAGAATCCTCCTaGGGAGGAAGTTGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSTLESS*GGSCSL
Trigger: AAGAGAGCAACTTCCTCCCCAGGAGGATTCTAAGGT...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTAGGAAGGTGAGATGCTaGATCTGCCAAAGAAGGTTG +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFRKVRC*ICQRRL
Trigger: CAACCTTCTTTGGCAGATCCAGCATCTCACCTTCCT...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCAAGGAAGGTGAGATGCTaGATCTGCCAAAGAAGGTTG +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSRKVRC*ICQRRL
Trigger: CAACCTTCTTTGGCAGATCCAGCATCTCACCTTCCT...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CCA 90 bp AGGTTTATTACATGGGGCCAAACAATGACAGAGATACAGGGTGCTTTATTTCAAAGGAGGTTTATTACATaGGGCCAAACAATGACAGAG +
Preference number: 4 (lower is better)
Translates to: RFITWGQTMTEIQGALFQRRFIT*GQTMTE
Trigger: CTCTGTCATTGTTTGGCCCCATGTAATAAACCTCCT...TTGAAATAAAGCACCCTGTATCTCTGTCATTGTTTGGCCCCATGTAATAAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468696.1
3UTR CAA 72 bp TCATTCATCCATTTCAGGACTTCAGGATTAGAAGTCTaGTCACCATGTGAAGGCCGGTATTTCTTTTCTTGT +
Preference number: 4 (lower is better)
Translates to: SFIHFRTSGLEV*SPCEGRYFFSC
Trigger: ACAAGAAAAGAAATACCGGCCTTCACATGGTGACAAGACTTCTAATCCTGAAGTCCTGAAATGGATGAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR TCA 90 bp GTTTGCAGTATATACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTCTGTTTCTTGGCACTTaGAGGCATTGTTTTGTGGAC +
Preference number: 4 (lower is better)
Translates to: VCSIYCHEGSFITLVLLCLFLGT*RHCFVD
Trigger: GTCCACAAAACAATGCCTTCAAGTGCCAAGAAACAG...ACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTATATACTGCAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR TCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTCTGTTTCTTGGCACTTaGAGGCATTGTTTTGTGGAC +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFLFLGT*RHCFVD
Trigger: GTCCACAAAACAATGCCTTCAAGTGCCAAGAAACAG...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR TCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCACTGTTTCTTGGCACTTaGAGGCATTGTTTTGTGGAC +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSLFLGT*RHCFVD
Trigger: GTCCACAAAACAATGCCTTCAAGTGCCAAGAAACAG...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR TCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCATGGTCTATTCTTGGTTaGAGTCGCACTGTTTCTTGG +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSWSILG*SRTVSW
Trigger: CCAAGAAACAGTGCGACTTCAACCAAGAATAGACCA...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR TCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTTGGTCTATTCTTGGTTaGAGTCGCACTGTTTCTTGG +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFWSILG*SRTVSW
Trigger: CCAAGAAACAGTGCGACTTCAACCAAGAATAGACCA...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR TCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCAAGTCTTGTCACCATGTaGAGGCCGGTATTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSSLVTM*RPVFLF
Trigger: GAAAAGAAATACCGGCCTTCACATGGTGACAAGACT...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR TCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTAGTCTTGTCACCATGTaGAGGCCGGTATTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFSLVTM*RPVFLF
Trigger: GAAAAGAAATACCGGCCTTCACATGGTGACAAGACT...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR TCA 90 bp TGTTGCATTGGACAAATCCTGAGTCTAAGCCAGTGTGGAAATTATATACATTTTGAGTCCTCTTCCTCCTaGATTGTTGGAATAAGGGAA +
Preference number: 4 (lower is better)
Translates to: CCIGQILSLSQCGNYIHFESSSS*IVGIRE
Trigger: TTCCCTTATTCCAACAATTCAGGAGGAAGAGGACTC...AAAATGTATATAATTTCCACACTGGCTTAGACTCAGGATTTGTCCAATGCAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR TCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTGAGTCCTCTTCCTCCTaGATTGTTGGAATAAGGGAA +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFESSSS*IVGIRE
Trigger: TTCCCTTATTCCAACAATTCAGGAGGAAGAGGACTC...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618804.5
CDS-3UTR TCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCAGAGTCCTCTTCCTCCTaGATTGTTGGAATAAGGGAA +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSESSSS*IVGIRE
Trigger: TTCCCTTATTCCAACAATTCAGGAGGAAGAGGACTC...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618804.5
CDS-3UTR GCA 90 bp TACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTGACATCCTGTTATCCTCATTTAAGTCCTaGCGAGTTTCAAAAGCATCC +
Preference number: 4 (lower is better)
Translates to: YCHEGSFITLVLLCDILLSSFKS*RVSKAS
Trigger: GGATGCTTTTGAAACTCGGCAGGACTTAAATGAGGA...TAACAGGATGTCACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR GCA 90 bp GCACTATTAGAATGTTGCATTGGACAAATCCTGAGTCTAAGCCAGTGTGGAAATGGTGTTGACAAGATTTaGTTGATAATTCTGTATCGG +
Preference number: 4 (lower is better)
Translates to: ALLECCIGQILSLSQCGNGVDKI*LIILYR
Trigger: CCGATACAGAATTATCAAGCAAATCTTGTCAACACC...ATTTCCACACTGGCTTAGACTCAGGATTTGTCCAATGCAACATTCTAATAGTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR CCA 90 bp GTTTGCAGTATATACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTCTGGAGCAATCAGTCTaGTCTTCATGTAGAGAGACT +
Preference number: 4 (lower is better)
Translates to: VCSIYCHEGSFITLVLLCLEQSV*SSCRET
Trigger: AGTCTCTCTACATGAAGACCAGACTGATTGCTCCAG...ACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTATATACTGCAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR CCA 90 bp TTAGAATGTTGCATTGGACAAATCCTGAGTCTAAGCCAGTGTGGAAATTATATACTGGAGCAATCAGTCTaGTCTTCATGTAGAGAGACT +
Preference number: 4 (lower is better)
Translates to: LECCIGQILSLSQCGNYILEQSV*SSCRET
Trigger: AGTCTCTCTACATGAAGACCAGACTGATTGCTCCAG...TATATAATTTCCACACTGGCTTAGACTCAGGATTTGTCCAATGCAACATTCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR CCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTCTGGAGCAATCAGTCTaGTCTTCATGTAGAGAGACT +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFLEQSV*SSCRET
Trigger: AGTCTCTCTACATGAAGACCAGACTGATTGCTCCAG...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCACTGGAGCAATCAGTCTaGTCTTCATGTAGAGAGACT +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSLEQSV*SSCRET
Trigger: AGTCTCTCTACATGAAGACCAGACTGATTGCTCCAG...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CCA 90 bp GTTTGCAGTATATACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTCCTCTGGTCTATTCTTaGTTGAAGTCGCACTGTTTC +
Preference number: 4 (lower is better)
Translates to: VCSIYCHEGSFITLVLLCPLVYS*LKSHCF
Trigger: GAAACAGTGCGACTTCAACCAAGAATAGACCAGAGG...ACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTATATACTGCAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR CCA 90 bp TTAGAATGTTGCATTGGACAAATCCTGAGTCTAAGCCAGTGTGGAAATTATATACCTCTGGTCTATTCTTaGTTGAAGTCGCACTGTTTC +
Preference number: 4 (lower is better)
Translates to: LECCIGQILSLSQCGNYIPLVYS*LKSHCF
Trigger: GAAACAGTGCGACTTCAACCAAGAATAGACCAGAGG...TATATAATTTCCACACTGGCTTAGACTCAGGATTTGTCCAATGCAACATTCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR CCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTCCTCTGGTCTATTCTTaGTTGAAGTCGCACTGTTTC +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFPLVYS*LKSHCF
Trigger: GAAACAGTGCGACTTCAACCAAGAATAGACCAGAGG...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCACCTCTGGTCTATTCTTaGTTGAAGTCGCACTGTTTC +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSPLVYS*LKSHCF
Trigger: GAAACAGTGCGACTTCAACCAAGAATAGACCAGAGG...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CCA 90 bp GTTTGCAGTATATACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTTTCAAAAGCATCCTTTaGCGAAATGGCAGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: VCSIYCHEGSFITLVLLCFKSIL*RNGSPL
Trigger: CAGAGGACTGCCATTTCGCCAAAGGATGCTTTTGAA...ACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTATATACTGCAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR CCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCATTCAAAAGCATCCTTTaGCGAAATGGCAGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSFKSIL*RNGSPL
Trigger: CAGAGGACTGCCATTTCGCCAAAGGATGCTTTTGAA...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTTTCAAAAGCATCCTTTaGCGAAATGGCAGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFFKSIL*RNGSPL
Trigger: CAGAGGACTGCCATTTCGCCAAAGGATGCTTTTGAA...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CCA 90 bp GTTTGCAGTATATACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTTTGAATCTCTGGCTTTaGCTGAAGATGGAGCATCGT +
Preference number: 4 (lower is better)
Translates to: VCSIYCHEGSFITLVLLCLNLWL*LKMEHR
Trigger: ACGATGCTCCATCTTCAGCCAAAGCCAGAGATTCAA...ACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTATATACTGCAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR CCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTTTGAATCTCTGGCTTTaGCTGAAGATGGAGCATCGT +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFLNLWL*LKMEHR
Trigger: ACGATGCTCCATCTTCAGCCAAAGCCAGAGATTCAA...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCATTGAATCTCTGGCTTTaGCTGAAGATGGAGCATCGT +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSLNLWL*LKMEHR
Trigger: ACGATGCTCCATCTTCAGCCAAAGCCAGAGATTCAA...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTCTAGTTTCTCGGAGATaGTCAAGAAGTACAGGCATG +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFLVSRR*SRSTGM
Trigger: CATGCCTGTACTTCTTGACCATCTCCGAGAAACTAG...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCACTAGTTTCTCGGAGATaGTCAAGAAGTACAGGCATG +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSLVSRR*SRSTGM
Trigger: CATGCCTGTACTTCTTGACCATCTCCGAGAAACTAG...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CCA 90 bp GGCCAAACAATGACAGAGATACAGGGTGCTTTATTTCAAAAGGGAGTTACAGTCGAATCTAAAATGCTCTaGAGCACATTATCACTAGTT +
Preference number: 4 (lower is better)
Translates to: GQTMTEIQGALFQKGVTVESKML*STLSLV
Trigger: AACTAGTGATAATGTGCTCCAGAGCATTTTAGATTC...GACTGTAACTCCCTTTTGAAATAAAGCACCCTGTATCTCTGTCATTGTTTGGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468696.1
CDS-3UTR CCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCAGCACATACACAAACATaGCATTGCAAGGCAAGTCTC +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSAHTQT*HCKASL
Trigger: GAGACTTGCCTTGCAATGCCATGTTTGTGTATGTGC...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611933.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTGCACATACACAAACATaGCATTGCAAGGCAAGTCTC +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFAHTQT*HCKASL
Trigger: GAGACTTGCCTTGCAATGCCATGTTTGTGTATGTGC...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000611933.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR TCA 90 bp TACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTGACATCCTGTTACTGAAGGAATTATCCTaGAGGCTGAAACAGAAACAA +
Preference number: 4 (lower is better)
Translates to: YCHEGSFITLVLLCDILLLKELS*RLKQKQ
Trigger: TTGTTTCTGTTTCAGCCTTCAGGATAATTCCTTCAG...TAACAGGATGTCACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR GCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTTCCTCATTTAAGTCCTaGCGAGTTTCAAAAGCATCC +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFSSFKS*RVSKAS
Trigger: GGATGCTTTTGAAACTCGGCAGGACTTAAATGAGGA...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000611933.4
ENST00000618427.4
ENST00000618804.5
ENST00000622363.4
CDS-3UTR GCA 90 bp GGAGTAACTTGTGGAACTAAGAAACCAACAACAAAGCAGTTATGTGGGCTAAAAGCACTATTAGAATGTTaGATTGGACAAATCCTGAGT +
Preference number: 4 (lower is better)
Translates to: GVTCGTKKPTTKQLCGLKALLEC*IGQILS
Trigger: ACTCAGGATTTGTCCAATGCAACATTCTAATAGTGC...TTTTAGCCCACATAACTGCTTTGTTGTTGGTTTCTTAGTTCCACAAGTTACTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR CCA 90 bp GTTTGCAGTATATACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTAGTCGCACTGTTTCTTaGCACTTGAAGGCATTGTTT +
Preference number: 4 (lower is better)
Translates to: VCSIYCHEGSFITLVLLCSRTVS*HLKALF
Trigger: AAACAATGCCTTCAAGTGCCAAGAAACAGTGCGACT...ACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTATATACTGCAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR CCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCAAGTCGCACTGTTTCTTaGCACTTGAAGGCATTGTTT +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSSRTVS*HLKALF
Trigger: AAACAATGCCTTCAAGTGCCAAGAAACAGTGCGACT...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTAGTCGCACTGTTTCTTaGCACTTGAAGGCATTGTTT +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFSRTVS*HLKALF
Trigger: AAACAATGCCTTCAAGTGCCAAGAAACAGTGCGACT...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR TCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCACTGAAGGAATTATCCTaGAGGCTGAAACAGAAACAA +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSLKELS*RLKQKQ
Trigger: TTGTTTCTGTTTCAGCCTTCAGGATAATTCCTTCAG...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR TCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTCTGAAGGAATTATCCTaGAGGCTGAAACAGAAACAA +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFLKELS*RLKQKQ
Trigger: TTGTTTCTGTTTCAGCCTTCAGGATAATTCCTTCAG...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR TCA 90 bp TACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTGACATCCTGTTAAGCATGCAAGTATCCTaGCTTACAATTGTTGGAATA +
Preference number: 4 (lower is better)
Translates to: YCHEGSFITLVLLCDILLSMQVS*LTIVGI
Trigger: TATTCCAACAATTGTAAGTCAGGATACTTGCATGCT...TAACAGGATGTCACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR GCA 90 bp TACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTGACATCCTGTTAATGAGGTTCTTGTCTTaGTTAGTTACCTTAGAATCC +
Preference number: 4 (lower is better)
Translates to: YCHEGSFITLVLLCDILLMRFLS*LVTLES
Trigger: GGATTCTAAGGTAACTAAGCAAGACAAGAACCTCAT...TAACAGGATGTCACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR GCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCAATGAGGTTCTTGTCTTaGTTAGTTACCCGGTATTTC +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSMRFLS*LVTRYF
Trigger: GAAATACCGGGTAACTAAGCAAGACAAGAACCTCAT...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611933.4
CDS-3UTR GCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTTTCTCATTTAAGTCCTaGCGAGTTTCAAAAGCATCC +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFFSFKS*RVSKAS
Trigger: GGATGCTTTTGAAACTCGGCAGGACTTAAATGAGAA...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000614220.4
ENST00000621119.4
CDS-3UTR CCA 90 bp TTAGAATGTTGCATTGGACAAATCCTGAGTCTAAGCCAGTGTGGAAATTATATACATGGAGAGAGCTGGTaGTTTTACTTCTTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: LECCIGQILSLSQCGNYIHGESW*FYFFLF
Trigger: GAAAAGAAAGAAGTAAAACCACCAGCTCTCTCCATG...TATATAATTTCCACACTGGCTTAGACTCAGGATTTGTCCAATGCAACATTCTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR CCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCACATGGAGAGAGCTGGTaGTTTTACTTCTTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSHGESW*FYFFLF
Trigger: GAAAAGAAAGAAGTAAAACCACCAGCTCTCTCCATG...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTCATGGAGAGAGCTGGTaGTTTTACTTCTTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFHGESW*FYFFLF
Trigger: GAAAAGAAAGAAGTAAAACCACCAGCTCTCTCCATG...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR TCA 90 bp GTTTGCAGTATATACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTTCTTGTACTACTATGTaGCATCCTGTTAACTACACA +
Preference number: 4 (lower is better)
Translates to: VCSIYCHEGSFITLVLLCSCTTM*HPVNYT
Trigger: TGTGTAGTTAACAGGATGTCACATAGTAGTACAAGA...ACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTATATACTGCAAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR TCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTTTTATTTTAGGGTACTaGGAGCCTAGCAGACTTAAA +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFFILGY*EPSRLK
Trigger: TTTAAGTCTGCTAGGCTCTCAGTACCCTAAAATAAA...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
36% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR TCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTAACAAGGTTGGTACATaGGAGAAAATGTTGACCTTT +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFNKVGT*EKMLTF
Trigger: AAAGGTCAACATTTTCTCTCATGTACCAACCTTGTT...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR GCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCAATGAGGTTCTTGTCTTaGTTAGTTACCTTAGAATCC +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSMRFLS*LVTLES
Trigger: GGATTCTAAGGTAACTAAGCAAGACAAGAACCTCAT...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR GCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTATGAGGTTCTTGTCTTaGTTAGTTACCTTAGAATCC +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFMRFLS*LVTLES
Trigger: GGATTCTAAGGTAACTAAGCAAGACAAGAACCTCAT...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR GCA 90 bp GTTTGCAGTATATACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTGGTGTTGACAAGATTTaGTTGATAATTCTGTATCGG +
Preference number: 4 (lower is better)
Translates to: VCSIYCHEGSFITLVLLCGVDKI*LIILYR
Trigger: CCGATACAGAATTATCAAGCAAATCTTGTCAACACC...ACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTATATACTGCAAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR GCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCAGGTGTTGACAAGATTTaGTTGATAATTCTGTATCGG +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSGVDKI*LIILYR
Trigger: CCGATACAGAATTATCAAGCAAATCTTGTCAACACC...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR GCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTGGTGTTGACAAGATTTaGTTGATAATTCTGTATCGG +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFGVDKI*LIILYR
Trigger: CCGATACAGAATTATCAAGCAAATCTTGTCAACACC...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR GCA 90 bp TACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTGACATCCTGTTAGTTTGCAGTATATACTaGCATGAAGGGTCTTTTATA +
Preference number: 4 (lower is better)
Translates to: YCHEGSFITLVLLCDILLVCSIY*HEGSFI
Trigger: TATAAAAGACCCTTCATGGCAGTATATACTGCAAAC...TAACAGGATGTCACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR GCA 90 bp GTTTGCAGTATATACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTACAACTAGCCTTGTTTaGAGTATATACTGCCATGAA +
Preference number: 4 (lower is better)
Translates to: VCSIYCHEGSFITLVLLCTTSLV*SIYCHE
Trigger: TTCATGGCAGTATATACTGCAAACAAGGCTAGTTGT...ACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTATATACTGCAAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR GCA 90 bp TCTGCCATTGGTATCCTATCTTCCTTTTGTGGACTTCTTCCTGTTTGTTTAAAATTCATAATACTCATCTaGCATTGGTATCCTATCTTC +
Preference number: 4 (lower is better)
Translates to: SAIGILSSFCGLLPVCLKFIILI*HWYPIF
Trigger: GAAGATAGGATACCAATGGCAGATGAGTATTATGAA...TTTTAAACAAACAGGAAGAAGTCCACAAAAGGAAGATAGGATACCAATGGCAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR GCA 90 bp GTTTGCAGTATATACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTTACAAAGTAACAGCATaGAAGTATCCTGACTTACAA +
Preference number: 4 (lower is better)
Translates to: VCSIYCHEGSFITLVLLCYKVTA*KYPDLQ
Trigger: TTGTAAGTCAGGATACTTGCATGCTGTTACTTTGTA...ACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTATATACTGCAAAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR GCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTTTCATAATACTCATCTaGCATTGGTATCCTATCTTC +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFFIILI*HWYPIF
Trigger: GAAGATAGGATACCAATGGCAGATGAGTATTATGAA...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR GCA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCATTCATAATACTCATCTaGCATTGGTATCCTATCTTC +
Preference number: 4 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSFIILI*HWYPIF
Trigger: GAAGATAGGATACCAATGGCAGATGAGTATTATGAA...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR GCA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTATACTACCACTAAAGTaGTTCCATTTTCATTGTGTC +
Preference number: 4 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFILPLK*FHFHCV
Trigger: GACACAATGAAAATGGAAGCACTTTAGTGGTAGTAT...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CCA 90 bp TTAGAATGTTGCATTGGACAAATCCTGAGTCTAAGCCAGTGTGGAAATTATATAATTAGAATGTTGCATTaGACAAATCCTGAGTCTAAG +
Preference number: 4 (lower is better)
Translates to: LECCIGQILSLSQCGNYIIRMLH*TNPESK
Trigger: CTTAGACTCAGGATTTGTCCAATGCAACATTCTAAT...TATATAATTTCCACACTGGCTTAGACTCAGGATTTGTCCAATGCAACATTCTAA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR CAA 90 bp TGCCCATGCTGGGTCGCAATACGCTGTCCACCAGCACGGTCGCCTCTACATTCTCTTCTCCAGAGGAGCTaGGCTCCGGGCCCGCAGCTT +
Preference number: 5 (lower is better)
Translates to: CPCWVAIRCPPARSPLHSLLQRS*APGPQL
Trigger: AAGCTGCGGGCCCGGAGCCAAGCTCCTCTGGAGAAG...AGAATGTAGAGGCGACCGTGCTGGTGGACAGCGTATTGCGACCCAGCATGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS GCA 90 bp ACACACAACAGTGTGTCCGCAGCTCCCGCAAGCACCTTCCTCCACTaGCTGGCAGGAAGAGGGTGGTGGCAACAGCTGCTTCAGGGAAAG +
Preference number: 5 (lower is better)
Translates to: THNSVSAAPASTFLH*LAGRGWWQQLLQGK
Trigger: CTTTCCCTGAAGCAGCTGTTGCCACCACCCTCTTCCTGCCAGGCAGTGGAGGAAGGTGCTTGCGGGAGCTGCGGACACACTGTTGTGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513377.1
CDS CCA 90 bp TCCAGGGCTGTCTCCAGCAGGTCTAGCAGGCTAGAGAGGCCATCCTaGGGCTATGTCAGGGCTAAGGTCACTGGAAGACACTCGGGTCAG +
Preference number: 5 (lower is better)
Translates to: SRAVSSRSSRLERPS*GYVRAKVTGRHSGQ
Trigger: CTGACCCGAGTGTCTTCCAGTGACCTTAGCCCTGACATAGCCCCAGGATGGCCTCTCTAGCCTGCTAGACCTGCTGGAGACAGCCCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507862.1
CDS CCA 90 bp GCAGCTCCCGCAAGCACCTTCCTCCACTGCCTGGCAGGAAGAGGGTaGTGGCAACAGCTGCTTCAGGGAAAGAACTGGTTGTGCCAGAAT +
Preference number: 5 (lower is better)
Translates to: AAPASTFLHCLAGRG*WQQLLQGKNWLCQN
Trigger: ATTCTGGCACAACCAGTTCTTTCCCTGAAGCAGCTGTTGCCACCACCCTCTTCCTGCCAGGCAGTGGAGGAAGGTGCTTGCGGGAGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513377.1
CDS CCA 90 bp ACAACAGTGTGTCCGCAGCTCCCGCAAGCACCTTCCTCCACTGCCTaGCAGGAAGAGGGTGGTGGCAACAGCTGCTTCAGGGAAAGAACT +
Preference number: 5 (lower is better)
Translates to: TTVCPQLPQAPSSTA*QEEGGGNSCFRERT
Trigger: AGTTCTTTCCCTGAAGCAGCTGTTGCCACCACCCTCTTCCTGCCAGGCAGTGGAGGAAGGTGCTTGCGGGAGCTGCGGACACACTGTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513377.1
CDS-3UTR CAA 90 bp TGCCCATGCTGGGTCGCAATACGCTGTCCACCAGCACGGTCGCCTCTACATTCTATGGTCTGTGGCTCCTaGCCATCTCCACAGCTGCAG +
Preference number: 5 (lower is better)
Translates to: CPCWVAIRCPPARSPLHSMVCGS*PSPQLQ
Trigger: CTGCAGCTGTGGAGATGGCAAGGAGCCACAGACCAT...AGAATGTAGAGGCGACCGTGCTGGTGGACAGCGTATTGCGACCCAGCATGGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR CAA 90 bp GTCCCATCGGCAAGCACGCTCTGGGTTGATGCTGGCGCCGGGTCCTTGACTCCATCAGGATTAGAAGTCTaGTCACCATGTGAAGGCCGG +
Preference number: 5 (lower is better)
Translates to: VPSASTLWVDAGAGSLTPSGLEV*SPCEGR
Trigger: CCGGCCTTCACATGGTGACAAGACTTCTAATCCTGA...TGGAGTCAAGGACCCGGCGCCAGCATCAACCCAGAGCGTGCTTGCCGATGGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS TCA 90 bp TCCCATCGGCAAGCACGCTCTGGGTTGATGCTGGCGCCGGGTCCTTaGCTCCATGCACCTGAGCAGCTTCTTCCTTTAGAATGCCCTGTA +
Preference number: 5 (lower is better)
Translates to: SHRQARSGLMLAPGP*LHAPEQLLPLECPV
Trigger: TACAGGGCATTCTAAAGGAAGAAGCTGCTCAGGTGCATGGAGTCAAGGACCCGGCGCCAGCATCAACCCAGAGCGTGCTTGCCGATGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477101.1
CDS TCA 90 bp TTAGTTACCTGCAGAATCTGTCCCATCGGCAAGCACGCTCTGGGTTaGTGCTGGCGCCGGGTCCTTGACTCCATGCACCTGAGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: LVTCRICPIGKHALG*CWRRVLDSMHLSSF
Trigger: GAAGCTGCTCAGGTGCATGGAGTCAAGGACCCGGCGCCAGCATCAACCCAGAGCGTGCTTGCCGATGGGACAGATTCTGCAGGTAACTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489341.5
CDS GCA 90 bp CAGCTGCAATGCCAGGCTCCCATCAGAATGTCATGCCAACCTTTCTaGAGGCTGCTTTCCACCCACATCCTTGCCCTGGATCCAGGGCTG +
Preference number: 5 (lower is better)
Translates to: QLQCQAPIRMSCQPF*RLLSTHILALDPGL
Trigger: CAGCCCTGGATCCAGGGCAAGGATGTGGGTGGAAAGCAGCCTGCAGAAAGGTTGGCATGACATTCTGATGGGAGCCTGGCATTGCAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507862.1
CDS GCA 90 bp CCTGATTGCTCTCCGGGAGTTAGAGCACATACACAAACATGGCATTaGAAGGCAAGTCTCCGGGCTCGCCCGGCACGCTCGCTCTACCTT +
Preference number: 5 (lower is better)
Translates to: PDCSPGVRAHTQTWH*KASLRARPARSLYL
Trigger: AAGGTAGAGCGAGCGTGCCGGGCGAGCCCGGAGACTTGCCTTGCAATGCCATGTTTGTGTATGTGCTCTAACTCCCGGAGAGCAATCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611933.4
ENST00000618427.4
ENST00000622363.4
CDS CCA 90 bp GCTCCCGCAAGCACCTTCCTCCACTGCCTGGCAGGAAGAGGGTGGTaGCAACAGCTGCTTCAGGGAAAGAACTGGTTGTGCCAGAATCAT +
Preference number: 5 (lower is better)
Translates to: APASTFLHCLAGRGW*QQLLQGKNWLCQNH
Trigger: ATGATTCTGGCACAACCAGTTCTTTCCCTGAAGCAGCTGTTGCCACCACCCTCTTCCTGCCAGGCAGTGGAGGAAGGTGCTTGCGGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513377.1
CDS-3UTR CAA 90 bp GGCTTTCCGCAGTCTCTTCTTGTCAGCCCTAGTTTCTCGGAGATGGTCAAGAAGCAAGCACGCTCTGGGTaGATGCTGGCGCCGGGTCCT +
Preference number: 5 (lower is better)
Translates to: GFPQSLLVSPSFSEMVKKQARSG*MLAPGP
Trigger: AGGACCCGGCGCCAGCATCAACCCAGAGCGTGCTTG...CTTCTTGACCATCTCCGAGAAACTAGGGCTGACAAGAAGAGACTGCGGAAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489341.5
ENST00000622363.4
CDS GCA 90 bp AATGCCAGGCTCCCATCAGAATGTCATGCCAACCTTTCTGCAGGCTaGTTTCCACCCACATCCTTGCCCTGGATCCAGGGCTGTCTCCAG +
Preference number: 5 (lower is better)
Translates to: NARLPSECHANLSAG*FPPTSLPWIQGCLQ
Trigger: CTGGAGACAGCCCTGGATCCAGGGCAAGGATGTGGGTGGAAAGCAGCCTGCAGAAAGGTTGGCATGACATTCTGATGGGAGCCTGGCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507862.1
CDS-3UTR CAA 90 bp CTCTACATTCTGCTGCTGCGGCTCCCAAGAGGGCGGCGCGTGCTCTTCTACCAGCTTGAAGGCATTGTTTaGTGGACTCTCATGAGCTGG +
Preference number: 5 (lower is better)
Translates to: LYILLLRLPRGRRVLFYQLEGIV*WTLMSW
Trigger: CCAGCTCATGAGAGTCCACAAAACAATGCCTTCAAG...CTGGTAGAAGAGCACGCGCCGCCCTCTTGGGAGCCGCAGCAGCAGAATGTAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR CAA 90 bp TGCCCATGCTGGGTCGCAATACGCTGTCCACCAGCACGGTCGCCTCTACATTCTGACTCGGGGTCTAAGTaGAATCTCTGGCTTTGGCTG +
Preference number: 5 (lower is better)
Translates to: CPCWVAIRCPPARSPLHSDSGSK*NLWLWL
Trigger: CAGCCAAAGCCAGAGATTCAACTTAGACCCCGAGTC...AGAATGTAGAGGCGACCGTGCTGGTGGACAGCGTATTGCGACCCAGCATGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS TCA 90 bp TCCCATCGGCAAGCACGCTCTGGGTTGATGCTGGCGCCGGGTCCTTaGCTCCATGCACCTGAGCAGCTTCTTCCTGGTTTGTTAAAAATG +
Preference number: 5 (lower is better)
Translates to: SHRQARSGLMLAPGP*LHAPEQLLPGLLKM
Trigger: CATTTTTAACAAACCAGGAAGAAGCTGCTCAGGTGCATGGAGTCAAGGACCCGGCGCCAGCATCAACCCAGAGCGTGCTTGCCGATGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000513377.1
ENST00000614220.4
ENST00000621119.4
CDS-3UTR CAA 90 bp CTTCCTGGACTTGAAGTTGCCCATGCTGGGTCGCAATACGCTGTCCACCAGCACTTCCTGGACTTGAAGTaGCCCATGCTGGGTCGCAAT +
Preference number: 5 (lower is better)
Translates to: LPGLEVAHAGSQYAVHQHFLDLK*PMLGRN
Trigger: ATTGCGACCCAGCATGGGCAACTTCAAGTCCAGGAA...GTGCTGGTGGACAGCGTATTGCGACCCAGCATGGGCAACTTCAAGTCCAGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619059.4
ENST00000622363.4
CDS-3UTR CAA 90 bp TGCCCATGCTGGGTCGCAATACGCTGTCCACCAGCACGGTCGCCTCTACATTCTGCTTTGAAGATGGACTaGGGCTTCCTGGACTTGAAG +
Preference number: 5 (lower is better)
Translates to: CPCWVAIRCPPARSPLHSALKMD*GFLDLK
Trigger: CTTCAAGTCCAGGAAGCCCAAGTCCATCTTCAAAGC...AGAATGTAGAGGCGACCGTGCTGGTGGACAGCGTATTGCGACCCAGCATGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619059.4
ENST00000622363.4
CDS-3UTR CAA 90 bp CTCTACATTCTGCTGCTGCGGCTCCCAAGAGGGCGGCGCGTGCTCTTCTACCAGCTGGTCTATTCTTGGTaGAAGTCGCACTGTTTCTTG +
Preference number: 5 (lower is better)
Translates to: LYILLLRLPRGRRVLFYQLVYSW*KSHCFL
Trigger: CAAGAAACAGTGCGACTTCAACCAAGAATAGACCAG...CTGGTAGAAGAGCACGCGCCGCCCTCTTGGGAGCCGCAGCAGCAGAATGTAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR CAA 90 bp AGCACGGTCGCCTCTACATTCTGCTGCTGCGGCTCCCAAGAGGGCGGCGCGTGCAATACTCATCTGCCATaGGTATCCTATCTTCCTTTT +
Preference number: 5 (lower is better)
Translates to: STVASTFCCCGSQEGGACNTHLP*VSYLPF
Trigger: AAAAGGAAGATAGGATACCAATGGCAGATGAGTATT...GCACGCGCCGCCCTCTTGGGAGCCGCAGCAGCAGAATGTAGAGGCGACCGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR CAA 90 bp CGGCGCGTGCTCTTCTACCAGAGCCCCTGCGTCGGGGTAGTTCTCTTTATTGTTTACACAAACATGGCATaGCAAGGCAAGTCTCCGGGC +
Preference number: 5 (lower is better)
Translates to: RRVLFYQSPCVGVVLFIVYTNMA*QGKSPG
Trigger: GCCCGGAGACTTGCCTTGCAATGCCATGTTTGTGTA...AACAATAAAGAGAACTACCCCGACGCAGGGGCTCTGGTAGAAGAGCACGCGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR CAA 90 bp TTTCCGCTTGAGGCTCTGGATGTGCTTGGTGAGCTGGGTGATGGTCTGTGGCTCAGTTTTGGCCACATCTaGCTTGCTGATGAGGACCTC +
Preference number: 5 (lower is better)
Translates to: FPLEALDVLGELGDGLWLSFGHI*LADEDL
Trigger: GAGGTCCTCATCAGCAAGCAAGATGTGGCCAAAACT...GAGCCACAGACCATCACCCAGCTCACCAAGCACATCCAGAGCCTCAAGCGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS TCA 90 bp CCCGAGGCTGGCAATGAGAATGCCCCAGTGTTTCTGCCGAAGTGCTaGAATACCCGGGAGACTTGCTTTCTTCCACATGTCTCCTACCAA +
Preference number: 5 (lower is better)
Translates to: PEAGNENAPVFLPKC*NTRETCFLPHVSYQ
Trigger: TTGGTAGGAGACATGTGGAAGAAAGCAAGTCTCCCGGGTATTTCAGCACTTCGGCAGAAACACTGGGGCATTCTCATTGCCAGCCTCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468840.6
CDS TCA 90 bp ACGCTCTGGGTTGATGCTGGCGCCGGGTCCTTGACTCCATGCACCTaGGCAGCTTCTTCCTGGTTTGTTAAAAATGCAGAGCACAGATCA +
Preference number: 5 (lower is better)
Translates to: TLWVDAGAGSLTPCT*AASSWFVKNAEHRS
Trigger: TGATCTGTGCTCTGCATTTTTAACAAACCAGGAAGAAGCTGCTCAGGTGCATGGAGTCAAGGACCCGGCGCCAGCATCAACCCAGAGCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000513377.1
ENST00000614220.4
ENST00000621119.4
CDS GCA 90 bp CAAGAAAACATCAGCCAAGTCTGGCCGGGGAGCCGTCTCCCTGATTaGTCTCCGGGAGTTAGAGCACATACACAAACATGGCATTGCAAG +
Preference number: 5 (lower is better)
Translates to: QENISQVWPGSRLPD*SPGVRAHTQTWHCK
Trigger: CTTGCAATGCCATGTTTGTGTATGTGCTCTAACTCCCGGAGAGCAATCAGGGAGACGGCTCCCCGGCCAGACTTGGCTGATGTTTTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CAA 90 bp TGCCCATGCTGGGTCGCAATACGCTGTCCACCAGCACGGTCGCCTCTACATTCTAAGTCGCACTGTTTCTaGGCACTTGAAGGCATTGTT +
Preference number: 5 (lower is better)
Translates to: CPCWVAIRCPPARSPLHSKSHCF*ALEGIV
Trigger: AACAATGCCTTCAAGTGCCAAGAAACAGTGCGACTT...AGAATGTAGAGGCGACCGTGCTGGTGGACAGCGTATTGCGACCCAGCATGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR CAA 90 bp TTGATGTCATACCTGACAGCTACCATGTCCCATGAAACATCCCTAATACTGGCACAAGCACGCTCTGGGTaGATGCTGGCGCCGGGTCCT +
Preference number: 5 (lower is better)
Translates to: LMSYLTATMSHETSLILAQARSG*MLAPGP
Trigger: AGGACCCGGCGCCAGCATCAACCCAGAGCGTGCTTG...TGCCAGTATTAGGGATGTTTCATGGGACATGGTAGCTGTCAGGTATGACATCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR CAA 90 bp CCGCAGCTTCCGGTTTCCCATTTTCTCTGGGGACTGTGGGTTGCTCACACAACATTTCTAGGTGGACCTTaGGGAGCACTCCCTTGTTCT +
Preference number: 5 (lower is better)
Translates to: PQLPVSHFLWGLWVAHTTFLGGP*GALPCS
Trigger: AGAACAAGGGAGTGCTCCCAAAGGTCCACCTAGAAA...TGTTGTGTGAGCAACCCACAGTCCCCAGAGAAAATGGGAAACCGGAAGCTGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR CAA 90 bp AGAGGGCGGCGCGTGCTCTTCTACCAGAGCCCCTGCGTCGGGGTAGTTCTCTTTGGCTTTATGAGGTTCTaGTCTTGCTTAGTTACCTTA +
Preference number: 5 (lower is better)
Translates to: RGRRVLFYQSPCVGVVLFGFMRF*SCLVTL
Trigger: TAAGGTAACTAAGCAAGACAAGAACCTCATAAAGCC...AAAGAGAACTACCCCGACGCAGGGGCTCTGGTAGAAGAGCACGCGCCGCCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR CAA 90 bp TCTCTTAAGGCTTTCCGCAGTCTCTTCTTGTCAGCCCTAGTTTCTCGGAGATGGTTGGGCTTCCTGGACTaGAAGTTGCCCATGCTGGGT +
Preference number: 5 (lower is better)
Translates to: SLKAFRSLFLSALVSRRWLGFLD*KLPMLG
Trigger: ACCCAGCATGGGCAACTTCAAGTCCAGGAAGCCCAA...CCATCTCCGAGAAACTAGGGCTGACAAGAAGAGACTGCGGAAAGCCTTAAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR CAA 90 bp TCCGCTTTGAAGATGGACTTGGGCTTCCTGGACTTGAAGTTGCCCATGCTGGGTGCTTTGAAGATGGACTaGGGCTTCCTGGACTTGAAG +
Preference number: 5 (lower is better)
Translates to: SALKMDLGFLDLKLPMLGALKMD*GFLDLK
Trigger: CTTCAAGTCCAGGAAGCCCAAGTCCATCTTCAAAGC...ACCCAGCATGGGCAACTTCAAGTCCAGGAAGCCCAAGTCCATCTTCAAAGCGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619059.4
ENST00000622363.4
CDS-3UTR CAA 90 bp CTTCCTGGACTTGAAGTTGCCCATGCTGGGTCGCAATACGCTGTCCACCAGCACTCCTCTGGTCTATTCTaGGTTGAAGTCGCACTGTTT +
Preference number: 5 (lower is better)
Translates to: LPGLEVAHAGSQYAVHQHSSGLF*VEVALF
Trigger: AAACAGTGCGACTTCAACCAAGAATAGACCAGAGGA...GTGCTGGTGGACAGCGTATTGCGACCCAGCATGGGCAACTTCAAGTCCAGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR CAA 90 bp CAAAGAAGGTTGTTGGCTTCCCTGTGGACGGTCTTCATCAGAGTCCTCTTCCTCTCATTCTGCCCATCTTaGTGGACTGGTGAGGGGTCT +
Preference number: 5 (lower is better)
Translates to: QRRLLASLWTVFIRVLFLSFCPS*WTGEGS
Trigger: AGACCCCTCACCAGTCCACAAAGATGGGCAGAATGA...GAGGAAGAGGACTCTGATGAAGACCGTCCACAGGGAAGCCAACAACCTTCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR CAA 90 bp AAGGGCCCTAACAGGCTCAGTCTCATTAGAGTAGGTGAGGTGGTCACCAACAGGGTTGAATCTCTGGCTTaGGCTGAAGATGGAGCATCG +
Preference number: 5 (lower is better)
Translates to: KGPNRLSLIRVGEVVTNRVESLA*AEDGAS
Trigger: CGATGCTCCATCTTCAGCCAAAGCCAGAGATTCAAC...CCTGTTGGTGACCACCTCACCTACTCTAATGAGACTGAGCCTGTTAGGGCCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR CAA 90 bp CTCTACATTCTGCTGCTGCGGCTCCCAAGAGGGCGGCGCGTGCTCTTCTACCAGTATGAGGTTCTTGTCTaGCTTAGTTACCTTAGAATC +
Preference number: 5 (lower is better)
Translates to: LYILLLRLPRGRRVLFYQYEVLV*LSYLRI
Trigger: GATTCTAAGGTAACTAAGCAAGACAAGAACCTCATA...CTGGTAGAAGAGCACGCGCCGCCCTCTTGGGAGCCGCAGCAGCAGAATGTAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR CAA 90 bp CTTCCTGGACTTGAAGTTGCCCATGCTGGGTCGCAATACGCTGTCCACCAGCACGAACCTCAAATAGTTTaGGCCACATCTTGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: LPGLEVAHAGSQYAVHQHEPQIV*ATSCLL
Trigger: CAGCAAGCAAGATGTGGCCAAAACTATTTGAGGTTC...GTGCTGGTGGACAGCGTATTGCGACCCAGCATGGGCAACTTCAAGTCCAGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS TCA 90 bp CTGCACCTGCCATGCTTGGTTGAAGTCGCACTGTTTCTTGGCACTTaGAGGCATTGTTTTGTGGACTCTCATGAGCTGGTGTTCCTGCTC +
Preference number: 5 (lower is better)
Translates to: LHLPCLVEVALFLGT*RHCFVDSHELVFLL
Trigger: GAGCAGGAACACCAGCTCATGAGAGTCCACAAAACAATGCCTTCAAGTGCCAAGAAACAGTGCGACTTCAACCAAGCATGGCAGGTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507862.1
CDS-3UTR CAA 90 bp GGAAGTTGCTCTCTTCTCTCCTTCAGGCATGTCAAGGCAGCATCTGGAGTCTCTTTCCGAATTTTCCGCTaGAGGCTCTGGATGTGCTTG +
Preference number: 5 (lower is better)
Translates to: GSCSLLSFRHVKAASGVSFRIFR*RLWMCL
Trigger: CAAGCACATCCAGAGCCTCAAGCGGAAAATTCGGAA...AGAGACTCCAGATGCTGCCTTGACATGCCTGAAGGAGAGAAGAGAGCAACTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR CAA 90 bp AATTCTCTTAAGGCTTTCCGCAGTCTCTTCTTGTCAGCCCTAGTTTCTCGGAGATGCCAAAGAAGGTTGTaGGCTTCCCTGTGGACGGTC +
Preference number: 5 (lower is better)
Translates to: NSLKAFRSLFLSALVSRRCQRRL*ASLWTV
Trigger: GACCGTCCACAGGGAAGCCAACAACCTTCTTTGGCA...TCTCCGAGAAACTAGGGCTGACAAGAAGAGACTGCGGAAAGCCTTAAGAGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489341.5
ENST00000622363.4
CDS-3UTR CAA 90 bp TACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTGACATCCTGTTACAAGCACGCTCTGGGTaGATGCTGGCGCCGGGTCCT +
Preference number: 5 (lower is better)
Translates to: YCHEGSFITLVLLCDILLQARSG*MLAPGP
Trigger: AGGACCCGGCGCCAGCATCAACCCAGAGCGTGCTTG...TAACAGGATGTCACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR CAA 90 bp CGGCGCGTGCTCTTCTACCAGAGCCCCTGCGTCGGGGTAGTTCTCTTTATTGTTGTTGACAAGATTTGCTaGATAATTCTGTATCGGTCA +
Preference number: 5 (lower is better)
Translates to: RRVLFYQSPCVGVVLFIVVDKIC*IILYRS
Trigger: TGACCGATACAGAATTATCAAGCAAATCTTGTCAAC...AACAATAAAGAGAACTACCCCGACGCAGGGGCTCTGGTAGAAGAGCACGCGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR CAA 90 bp AATTCTCTTAAGGCTTTCCGCAGTCTCTTCTTGTCAGCCCTAGTTTCTCGGAGAATCTGCCAAAGAAGGTaGTTGGCTTCCCTGTGGACG +
Preference number: 5 (lower is better)
Translates to: NSLKAFRSLFLSALVSRRICQRR*LASLWT
Trigger: CGTCCACAGGGAAGCCAACAACCTTCTTTGGCAGAT...TCTCCGAGAAACTAGGGCTGACAAGAAGAGACTGCGGAAAGCCTTAAGAGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489341.5
ENST00000622363.4
CDS-3UTR CAA 90 bp GGCTTTCCGCAGTCTCTTCTTGTCAGCCCTAGTTTCTCGGAGATGGTCAAGAAGGGCTTTATGAGGTTCTaGTCTTGCTTAGTTACCTGC +
Preference number: 5 (lower is better)
Translates to: GFPQSLLVSPSFSEMVKKGFMRF*SCLVTC
Trigger: GCAGGTAACTAAGCAAGACAAGAACCTCATAAAGCC...CTTCTTGACCATCTCCGAGAAACTAGGGCTGACAAGAAGAGACTGCGGAAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489341.5
CDS-3UTR CAA 90 bp TCCTTTGCCCATTTAAGCTTCATCACTCTGTTTAGAATCGGCTGTAACATTCGGTTGGGCTTCCTGGACTaGAAGTTGCCCATGCTGGGT +
Preference number: 5 (lower is better)
Translates to: SFAHLSFITLFRIGCNIRLGFLD*KLPMLG
Trigger: ACCCAGCATGGGCAACTTCAAGTCCAGGAAGCCCAA...CCGAATGTTACAGCCGATTCTAAACAGAGTGATGAAGCTTAAATGGGCAAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619059.4
CDS-3UTR CAA 90 bp TGCCAAAGAAGGTTGTTGGCTTCCCTGTGGACGGTCTTCATCAGAGTCCTCTTCACTGTTTCTTGGCACTaGAAGGCATTGTTTTGTGGA +
Preference number: 5 (lower is better)
Translates to: CQRRLLASLWTVFIRVLFTVSWH*KALFCG
Trigger: TCCACAAAACAATGCCTTCAAGTGCCAAGAAACAGT...GAAGAGGACTCTGATGAAGACCGTCCACAGGGAAGCCAACAACCTTCTTTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR CAA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTCAAGCACGCTCTGGGTaGATGCTGGCGCCGGGTCCT +
Preference number: 5 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFQARSG*MLAPGP
Trigger: AGGACCCGGCGCCAGCATCAACCCAGAGCGTGCTTG...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CAA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCACAAGCACGCTCTGGGTaGATGCTGGCGCCGGGTCCT +
Preference number: 5 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSQARSG*MLAPGP
Trigger: AGGACCCGGCGCCAGCATCAACCCAGAGCGTGCTTG...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CAA 90 bp TTTTACAGATTGATGTCATACCTGACAGCTACCATGTCCCATGAAACATCCCTAATGGTCTGTGGCTCCTaGCCATCTCCACAGCTGCAG +
Preference number: 5 (lower is better)
Translates to: FYRLMSYLTATMSHETSLMVCGS*PSPQLQ
Trigger: CTGCAGCTGTGGAGATGGCAAGGAGCCACAGACCAT...TAGGGATGTTTCATGGGACATGGTAGCTGTCAGGTATGACATCAATCTGTAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR CAA 90 bp TTTCTTTGTAAGGAGGTTTATTACATGGGGCCAAACAATGACAGAGATACAGGGATGGTCTGTGGCTCCTaGCCATCTCCACAGCTGCAG +
Preference number: 5 (lower is better)
Translates to: FLCKEVYYMGPNNDRDTGMVCGS*PSPQLQ
Trigger: CTGCAGCTGTGGAGATGGCAAGGAGCCACAGACCAT...CCCTGTATCTCTGTCATTGTTTGGCCCCATGTAATAAACCTCCTTACAAAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468696.1
CDS-3UTR CAA 90 bp GTTTGCAGTATATACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTCTTCTCCAGAGGAGCTaGGCTCCGGGCCCGCAGCTT +
Preference number: 5 (lower is better)
Translates to: VCSIYCHEGSFITLVLLCLLQRS*APGPQL
Trigger: AAGCTGCGGGCCCGGAGCCAAGCTCCTCTGGAGAAG...ACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTATATACTGCAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR CAA 90 bp TGTTGCATTGGACAAATCCTGAGTCTAAGCCAGTGTGGAAATTATATACATTTTCTTCTCCAGAGGAGCTaGGCTCCGGGCCCGCAGCTT +
Preference number: 5 (lower is better)
Translates to: CCIGQILSLSQCGNYIHFLLQRS*APGPQL
Trigger: AAGCTGCGGGCCCGGAGCCAAGCTCCTCTGGAGAAG...AAAATGTATATAATTTCCACACTGGCTTAGACTCAGGATTTGTCCAATGCAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR CAA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCACTTCTCCAGAGGAGCTaGGCTCCGGGCCCGCAGCTT +
Preference number: 5 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSLLQRS*APGPQL
Trigger: AAGCTGCGGGCCCGGAGCCAAGCTCCTCTGGAGAAG...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CAA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTCTTCTCCAGAGGAGCTaGGCTCCGGGCCCGCAGCTT +
Preference number: 5 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFLLQRS*APGPQL
Trigger: AAGCTGCGGGCCCGGAGCCAAGCTCCTCTGGAGAAG...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CAA 90 bp TTGATGTCATACCTGACAGCTACCATGTCCCATGAAACATCCCTAATACTGGCAATCTGCCAAAGAAGGTaGTTGGCTTCCCTGTGGACG +
Preference number: 5 (lower is better)
Translates to: LMSYLTATMSHETSLILAICQRR*LASLWT
Trigger: CGTCCACAGGGAAGCCAACAACCTTCTTTGGCAGAT...TGCCAGTATTAGGGATGTTTCATGGGACATGGTAGCTGTCAGGTATGACATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR CAA 90 bp TTGATGTCATACCTGACAGCTACCATGTCCCATGAAACATCCCTAATACTGGCAGCTTTGAAGATGGACTaGGGCTTCCTGGACTTGAAG +
Preference number: 5 (lower is better)
Translates to: LMSYLTATMSHETSLILAALKMD*GFLDLK
Trigger: CTTCAAGTCCAGGAAGCCCAAGTCCATCTTCAAAGC...TGCCAGTATTAGGGATGTTTCATGGGACATGGTAGCTGTCAGGTATGACATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR CAA 90 bp GGCACTATTAGAATGTTGCATTGGACAAATCCTGAGTCTAAGCCAGTGTGGAAATCATTCTGCCCATCTTaGTGGACTGGTGAGGGGTCT +
Preference number: 5 (lower is better)
Translates to: GTIRMLHWTNPESKPVWKSFCPS*WTGEGS
Trigger: AGACCCCTCACCAGTCCACAAAGATGGGCAGAATGA...TTTCCACACTGGCTTAGACTCAGGATTTGTCCAATGCAACATTCTAATAGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR CAA 90 bp ACATGGGGCCAAACAATGACAGAGATACAGGGTGCTTTATTTCAAAAGGGAGTTGACTCGGGGTCTAAGTaGAATCTCTGGCTTTGGCTG +
Preference number: 5 (lower is better)
Translates to: TWGQTMTEIQGALFQKGVDSGSK*NLWLWL
Trigger: CAGCCAAAGCCAGAGATTCAACTTAGACCCCGAGTC...AACTCCCTTTTGAAATAAAGCACCCTGTATCTCTGTCATTGTTTGGCCCCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000468696.1
CDS-3UTR CAA 90 bp GGAGTAACTTGTGGAACTAAGAAACCAACAACAAAGCAGTTATGTGGGCTAAAAAGGCTCTGGATGTGCTaGGTGAGCTGGGTGATGGTC +
Preference number: 5 (lower is better)
Translates to: GVTCGTKKPTTKQLCGLKRLWMC*VSWVMV
Trigger: GACCATCACCCAGCTCACCAAGCACATCCAGAGCCT...TTTTAGCCCACATAACTGCTTTGTTGTTGGTTTCTTAGTTCCACAAGTTACTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR CAA 90 bp CAGAGATACAGGGTGCTTTATTTCAAAAGGGAGTTACAGTCTAAGCAGAAAACAAGGCTCTGGATGTGCTaGGTGAGCTGGGTGATGGTC +
Preference number: 5 (lower is better)
Translates to: QRYRVLYFKRELQSKQKTRLWMC*VSWVMV
Trigger: GACCATCACCCAGCTCACCAAGCACATCCAGAGCCT...TGTTTTCTGCTTAGACTGTAACTCCCTTTTGAAATAAAGCACCCTGTATCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468696.1
CDS-3UTR CAA 90 bp AATACTGGCACTATTAGAATGTTGCATTGGACAAATCCTGAGTCTAAGCCAGTGTGCCAAAGAAGGTTGTaGGCTTCCCTGTGGACGGTC +
Preference number: 5 (lower is better)
Translates to: NTGTIRMLHWTNPESKPVCQRRL*ASLWTV
Trigger: GACCGTCCACAGGGAAGCCAACAACCTTCTTTGGCA...CACTGGCTTAGACTCAGGATTTGTCCAATGCAACATTCTAATAGTGCCAGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR CAA 90 bp GAACCTCAAATAGTTTTGGCCACATCTTGCTTGCTGATGAGGACCTCTAATAGTATCTGCCAAAGAAGGTaGTTGGCTTCCCTGTGGACG +
Preference number: 5 (lower is better)
Translates to: EPQIVLATSCLLMRTSNSICQRR*LASLWT
Trigger: CGTCCACAGGGAAGCCAACAACCTTCTTTGGCAGAT...ACTATTAGAGGTCCTCATCAGCAAGCAAGATGTGGCCAAAACTATTTGAGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR CAA 90 bp ACTTCTTTCTTTTCATCTGGTAAAAGGGCCCTAACAGGCTCAGTCTCATTAGAGTTCCGCAGTCTCTTCTaGTCAGCCCTAGTTTCTCGG +
Preference number: 5 (lower is better)
Translates to: TSFFSSGKRALTGSVSLEFRSLF*SALVSR
Trigger: CCGAGAAACTAGGGCTGACAAGAAGAGACTGCGGAA...CTCTAATGAGACTGAGCCTGTTAGGGCCCTTTTACCAGATGAAAAGAAAGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489341.5
ENST00000622363.4
CDS-3UTR CAA 90 bp GAGGTGGTCACCAACAGGAAGGTGAGATGCTGGATCTGCCAAAGAAGGTTGTTGTATCCTATCTTCCTTTaGTGGACTTCTTCCTGTTTG +
Preference number: 5 (lower is better)
Translates to: EVVTNRKVRCWICQRRLLYPIFL*WTSSCL
Trigger: CAAACAGGAAGAAGTCCACAAAAGGAAGATAGGATA...CAACAACCTTCTTTGGCAGATCCAGCATCTCACCTTCCTGTTGGTGACCACCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489341.5
ENST00000622363.4
CDS-3UTR CAA 90 bp CAAAGAAGGTTGTTGGCTTCCCTGTGGACGGTCTTCATCAGAGTCCTCTTCCTCTATGAGGTTCTTGTCTaGCTTAGTTACCTGCAGAAT +
Preference number: 5 (lower is better)
Translates to: QRRLLASLWTVFIRVLFLYEVLV*LSYLQN
Trigger: ATTCTGCAGGTAACTAAGCAAGACAAGAACCTCATA...GAGGAAGAGGACTCTGATGAAGACCGTCCACAGGGAAGCCAACAACCTTCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489341.5
CDS-3UTR CAA 90 bp TCCCTAATACTGGCACTATTAGAATGTTGCATTGGACAAATCCTGAGTCTAAGCTTCCTGGACTTGAAGTaGCCCATGCTGGGTCGCAAT +
Preference number: 5 (lower is better)
Translates to: SLILALLECCIGQILSLSFLDLK*PMLGRN
Trigger: ATTGCGACCCAGCATGGGCAACTTCAAGTCCAGGAA...GCTTAGACTCAGGATTTGTCCAATGCAACATTCTAATAGTGCCAGTATTAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR CAA 90 bp GGAGTAACTTGTGGAACTAAGAAACCAACAACAAAGCAGTTATGTGGGCTAAAATTGGGCTTCCTGGACTaGAAGTTGCCCATGCTGGGT +
Preference number: 5 (lower is better)
Translates to: GVTCGTKKPTTKQLCGLKLGFLD*KLPMLG
Trigger: ACCCAGCATGGGCAACTTCAAGTCCAGGAAGCCCAA...TTTTAGCCCACATAACTGCTTTGTTGTTGGTTTCTTAGTTCCACAAGTTACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR CAA 90 bp GCACTATTAGAATGTTGCATTGGACAAATCCTGAGTCTAAGCCAGTGTGGAAATGACTCGGGGTCTAAGTaGAATCTCTGGCTTTGGCTG +
Preference number: 5 (lower is better)
Translates to: ALLECCIGQILSLSQCGNDSGSK*NLWLWL
Trigger: CAGCCAAAGCCAGAGATTCAACTTAGACCCCGAGTC...ATTTCCACACTGGCTTAGACTCAGGATTTGTCCAATGCAACATTCTAATAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR CAA 90 bp TACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTGACATCCTGTTAATGGTCTGTGGCTCCTaGCCATCTCCACAGCTGCAG +
Preference number: 5 (lower is better)
Translates to: YCHEGSFITLVLLCDILLMVCGS*PSPQLQ
Trigger: CTGCAGCTGTGGAGATGGCAAGGAGCCACAGACCAT...TAACAGGATGTCACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR CAA 90 bp TACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTGACATCCTGTTAAGGCTCTGGATGTGCTaGGTGAGCTGGGTGATGGTC +
Preference number: 5 (lower is better)
Translates to: YCHEGSFITLVLLCDILLRLWMC*VSWVMV
Trigger: GACCATCACCCAGCTCACCAAGCACATCCAGAGCCT...TAACAGGATGTCACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR CAA 90 bp TCCTCAATTGTTGGAATAAGGGAAGGTGTTGACAAGATTTGCTTGATAATTCTGAGGCTCTGGATGTGCTaGGTGAGCTGGGTGATGGTC +
Preference number: 5 (lower is better)
Translates to: SSIVGIREGVDKICLIILRLWMC*VSWVMV
Trigger: GACCATCACCCAGCTCACCAAGCACATCCAGAGCCT...CAGAATTATCAAGCAAATCTTGTCAACACCTTCCCTTATTCCAACAATTGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR CAA 90 bp GGCTTTCCGCAGTCTCTTCTTGTCAGCCCTAGTTTCTCGGAGATGGTCAAGAAGGTTGACAAGATTTGCTaGATAATTCTGTATCGGTCA +
Preference number: 5 (lower is better)
Translates to: GFPQSLLVSPSFSEMVKKVDKIC*IILYRS
Trigger: TGACCGATACAGAATTATCAAGCAAATCTTGTCAAC...CTTCTTGACCATCTCCGAGAAACTAGGGCTGACAAGAAGAGACTGCGGAAAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489341.5
ENST00000622363.4
CDS-3UTR CAA 90 bp AATACTGGCACTATTAGAATGTTGCATTGGACAAATCCTGAGTCTAAGCCAGTGTTCCGCAGTCTCTTCTaGTCAGCCCTAGTTTCTCGG +
Preference number: 5 (lower is better)
Translates to: NTGTIRMLHWTNPESKPVFRSLF*SALVSR
Trigger: CCGAGAAACTAGGGCTGACAAGAAGAGACTGCGGAA...CACTGGCTTAGACTCAGGATTTGTCCAATGCAACATTCTAATAGTGCCAGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR CAA 90 bp ATTACATGGGGCCAAACAATGACAGAGATACAGGGTGCTTTATTTCAAAAGGGAGTTGAATCTCTGGCTTaGGCTGAAGATGGAGCATCG +
Preference number: 5 (lower is better)
Translates to: ITWGQTMTEIQGALFQKGVESLA*AEDGAS
Trigger: CGATGCTCCATCTTCAGCCAAAGCCAGAGATTCAAC...TCCCTTTTGAAATAAAGCACCCTGTATCTCTGTCATTGTTTGGCCCCATGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468696.1
CDS-3UTR CAA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTATGGTCTGTGGCTCCTaGCCATCTCCACAGCTGCAG +
Preference number: 5 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFMVCGS*PSPQLQ
Trigger: CTGCAGCTGTGGAGATGGCAAGGAGCCACAGACCAT...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CAA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCAATGGTCTGTGGCTCCTaGCCATCTCCACAGCTGCAG +
Preference number: 5 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSMVCGS*PSPQLQ
Trigger: CTGCAGCTGTGGAGATGGCAAGGAGCCACAGACCAT...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CAA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCAAGGCTCTGGATGTGCTaGGTGAGCTGGGTGATGGTC +
Preference number: 5 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSRLWMC*VSWVMV
Trigger: GACCATCACCCAGCTCACCAAGCACATCCAGAGCCT...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CAA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTAGGCTCTGGATGTGCTaGGTGAGCTGGGTGATGGTC +
Preference number: 5 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFRLWMC*VSWVMV
Trigger: GACCATCACCCAGCTCACCAAGCACATCCAGAGCCT...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CAA 90 bp TTGCTTGATAATTCTGTATCGGTCATAAAGCGGCTTTATGAGGTTCTTGTCTTGTCTGGGGACTGTGGGTaGCTCACACAACAGGTTTCT +
Preference number: 5 (lower is better)
Translates to: LLDNSVSVIKRLYEVLVLSGDCG*LTQQVS
Trigger: AGAAACCTGTTGTGTGAGCAACCCACAGTCCCCAGA...CAAGACAAGAACCTCATAAAGCCGCTTTATGACCGATACAGAATTATCAAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS-3UTR CAA 90 bp TCCTCAATTGTTGGAATAAGGGAAGGTGTTGACAAGATTTGCTTGATAATTCTGTGCCAAAGAAGGTTGTaGGCTTCCCTGTGGACGGTC +
Preference number: 5 (lower is better)
Translates to: SSIVGIREGVDKICLIILCQRRL*ASLWTV
Trigger: GACCGTCCACAGGGAAGCCAACAACCTTCTTTGGCA...CAGAATTATCAAGCAAATCTTGTCAACACCTTCCCTTATTCCAACAATTGAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622363.4
CDS TCA 90 bp TGTGTGAAAGAATGTGGGTCAATCTATATAGTTCACCCCCTTGGTTaGAGTCGCACTGTTTCTTGGCACTTGAAGGCATTGTTTTGTGGA +
Preference number: 5 (lower is better)
Translates to: CVKECGSIYIVHPLG*SRTVSWHLKALFCG
Trigger: TCCACAAAACAATGCCTTCAAGTGCCAAGAAACAGTGCGACTTCAACCAAGGGGGTGAACTATATAGATTGACCCACATTCTTTCACACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470220.5
CDS GCA 90 bp ATTCTTTCTTCTGTTTATTTCCAGAAGAGACTTTCCATAGACAGCTaGAATGCCAGGCTCCCATCAGAATGTCATGCCAACCTTTCTGCA +
Preference number: 5 (lower is better)
Translates to: ILSSVYFQKRLSIDS*NARLPSECHANLSA
Trigger: TGCAGAAAGGTTGGCATGACATTCTGATGGGAGCCTGGCATTGCAGCTGTCTATGGAAAGTCTCTTCTGGAAATAAACAGAAGAAAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507862.1
CDS-3UTR CAA 90 bp TACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTGACATCCTGTTATTCCTGGACTTGAAGTaGCCCATGCTGGGTCGCAAT +
Preference number: 5 (lower is better)
Translates to: YCHEGSFITLVLLCDILLFLDLK*PMLGRN
Trigger: ATTGCGACCCAGCATGGGCAACTTCAAGTCCAGGAA...TAACAGGATGTCACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR CAA 90 bp GTTTGCAGTATATACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTTTGGGCTTCCTGGACTaGAAGTTGCCCATGCTGGGT +
Preference number: 5 (lower is better)
Translates to: VCSIYCHEGSFITLVLLCLGFLD*KLPMLG
Trigger: ACCCAGCATGGGCAACTTCAAGTCCAGGAAGCCCAA...ACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTATATACTGCAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR CAA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTTTGGGCTTCCTGGACTaGAAGTTGCCCATGCTGGGT +
Preference number: 5 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFLGFLD*KLPMLG
Trigger: ACCCAGCATGGGCAACTTCAAGTCCAGGAAGCCCAA...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CAA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCATTGGGCTTCCTGGACTaGAAGTTGCCCATGCTGGGT +
Preference number: 5 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSLGFLD*KLPMLG
Trigger: ACCCAGCATGGGCAACTTCAAGTCCAGGAAGCCCAA...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CAA 90 bp TACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTGACATCCTGTTATCATTCTGCCCATCTTaGTGGACTGGTGAGGGGTCT +
Preference number: 5 (lower is better)
Translates to: YCHEGSFITLVLLCDILLSFCPS*WTGEGS
Trigger: AGACCCCTCACCAGTCCACAAAGATGGGCAGAATGA...TAACAGGATGTCACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR CAA 90 bp AGGTTTATTACATGGGGCCAAACAATGACAGAGATACAGGGTGCTTTATTTCAATTCCGAATTTTCCGCTaGAGGCTCTGGATGTGCTTG +
Preference number: 5 (lower is better)
Translates to: RFITWGQTMTEIQGALFQFRIFR*RLWMCL
Trigger: CAAGCACATCCAGAGCCTCAAGCGGAAAATTCGGAA...TTGAAATAAAGCACCCTGTATCTCTGTCATTGTTTGGCCCCATGTAATAAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468696.1
CDS-3UTR CAA 90 bp AGGTTTATTACATGGGGCCAAACAATGACAGAGATACAGGGTGCTTTATTTCAATCAGGATTAGAAGTCTaGTCACCATGTGAAGGCCGG +
Preference number: 5 (lower is better)
Translates to: RFITWGQTMTEIQGALFQSGLEV*SPCEGR
Trigger: CCGGCCTTCACATGGTGACAAGACTTCTAATCCTGA...TTGAAATAAAGCACCCTGTATCTCTGTCATTGTTTGGCCCCATGTAATAAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468696.1
CDS-3UTR CAA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCATGCCAAAGAAGGTTGTaGGCTTCCCTGTGGACGGTC +
Preference number: 5 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSCQRRL*ASLWTV
Trigger: GACCGTCCACAGGGAAGCCAACAACCTTCTTTGGCA...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CAA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTTGCCAAAGAAGGTTGTaGGCTTCCCTGTGGACGGTC +
Preference number: 5 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFCQRRL*ASLWTV
Trigger: GACCGTCCACAGGGAAGCCAACAACCTTCTTTGGCA...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS CCA 90 bp AAACTGTGTGAAAGAATGTGGGTCAATCTATATAGTTCACCCCCTTaGTTGAAGTCGCACTGTTTCTTGGCACTTGAAGGCATTGTTTTG +
Preference number: 5 (lower is better)
Translates to: KLCERMWVNLYSSPP*LKSHCFLALEGIVL
Trigger: CAAAACAATGCCTTCAAGTGCCAAGAAACAGTGCGACTTCAACCAAGGGGGTGAACTATATAGATTGACCCACATTCTTTCACACAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470220.5
CDS-3UTR CAA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCATTCCTGGACTTGAAGTaGCCCATGCTGGGTCGCAAT +
Preference number: 5 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSFLDLK*PMLGRN
Trigger: ATTGCGACCCAGCATGGGCAACTTCAAGTCCAGGAA...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CAA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTTTCCTGGACTTGAAGTaGCCCATGCTGGGTCGCAAT +
Preference number: 5 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFFLDLK*PMLGRN
Trigger: ATTGCGACCCAGCATGGGCAACTTCAAGTCCAGGAA...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CAA 90 bp TACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTGACATCCTGTTAGCTTTGAAGATGGACTaGGGCTTCCTGGACTTGAAG +
Preference number: 5 (lower is better)
Translates to: YCHEGSFITLVLLCDILLALKMD*GFLDLK
Trigger: CTTCAAGTCCAGGAAGCCCAAGTCCATCTTCAAAGC...TAACAGGATGTCACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR CAA 90 bp TTTTACAGATTGATGTCATACCTGACAGCTACCATGTCCCATGAAACATCCCTACTGGTCTATTCTTGGTaGAAGTCGCACTGTTTCTTG +
Preference number: 5 (lower is better)
Translates to: FYRLMSYLTATMSHETSLLVYSW*KSHCFL
Trigger: CAAGAAACAGTGCGACTTCAACCAAGAATAGACCAG...TAGGGATGTTTCATGGGACATGGTAGCTGTCAGGTATGACATCAATCTGTAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR CAA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCATCATTCTGCCCATCTTaGTGGACTGGTGAGGGGTCT +
Preference number: 5 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSSFCPS*WTGEGS
Trigger: AGACCCCTCACCAGTCCACAAAGATGGGCAGAATGA...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CAA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTTCATTCTGCCCATCTTaGTGGACTGGTGAGGGGTCT +
Preference number: 5 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFSFCPS*WTGEGS
Trigger: AGACCCCTCACCAGTCCACAAAGATGGGCAGAATGA...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CAA 90 bp TACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTGACATCCTGTTAGTTGAATCTCTGGCTTaGGCTGAAGATGGAGCATCG +
Preference number: 5 (lower is better)
Translates to: YCHEGSFITLVLLCDILLVESLA*AEDGAS
Trigger: CGATGCTCCATCTTCAGCCAAAGCCAGAGATTCAAC...TAACAGGATGTCACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR CAA 90 bp GTTTGCAGTATATACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTGACTCGGGGTCTAAGTaGAATCTCTGGCTTTGGCTG +
Preference number: 5 (lower is better)
Translates to: VCSIYCHEGSFITLVLLCDSGSK*NLWLWL
Trigger: CAGCCAAAGCCAGAGATTCAACTTAGACCCCGAGTC...ACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTATATACTGCAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR CAA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCAGACTCGGGGTCTAAGTaGAATCTCTGGCTTTGGCTG +
Preference number: 5 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSDSGSK*NLWLWL
Trigger: CAGCCAAAGCCAGAGATTCAACTTAGACCCCGAGTC...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CAA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTGACTCGGGGTCTAAGTaGAATCTCTGGCTTTGGCTG +
Preference number: 5 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFDSGSK*NLWLWL
Trigger: CAGCCAAAGCCAGAGATTCAACTTAGACCCCGAGTC...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CAA 90 bp TACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTGACATCCTGTTATCAGGATTAGAAGTCTaGTCACCATGTGAAGGCCGG +
Preference number: 5 (lower is better)
Translates to: YCHEGSFITLVLLCDILLSGLEV*SPCEGR
Trigger: CCGGCCTTCACATGGTGACAAGACTTCTAATCCTGA...TAACAGGATGTCACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR CAA 90 bp GTTTGCAGTATATACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTTCTGGGGACTGTGGGTaGCTCACACAACAGGTTTCT +
Preference number: 5 (lower is better)
Translates to: VCSIYCHEGSFITLVLLCSGDCG*LTQQVS
Trigger: AGAAACCTGTTGTGTGAGCAACCCACAGTCCCCAGA...ACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTATATACTGCAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR CAA 90 bp TGTTGCATTGGACAAATCCTGAGTCTAAGCCAGTGTGGAAATTATATACATTTTTCTGGGGACTGTGGGTaGCTCACACAACAGGTTTCT +
Preference number: 5 (lower is better)
Translates to: CCIGQILSLSQCGNYIHFSGDCG*LTQQVS
Trigger: AGAAACCTGTTGTGTGAGCAACCCACAGTCCCCAGA...AAAATGTATATAATTTCCACACTGGCTTAGACTCAGGATTTGTCCAATGCAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR CAA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCATCTGGGGACTGTGGGTaGCTCACACAACAGGTTTCT +
Preference number: 5 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSSGDCG*LTQQVS
Trigger: AGAAACCTGTTGTGTGAGCAACCCACAGTCCCCAGA...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CAA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTTCTGGGGACTGTGGGTaGCTCACACAACAGGTTTCT +
Preference number: 5 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFSGDCG*LTQQVS
Trigger: AGAAACCTGTTGTGTGAGCAACCCACAGTCCCCAGA...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CAA 90 bp TTGATGTCATACCTGACAGCTACCATGTCCCATGAAACATCCCTAATACTGGCAGGCTTTATGAGGTTCTaGTCTTGCTTAGTTACCTTA +
Preference number: 5 (lower is better)
Translates to: LMSYLTATMSHETSLILAGFMRF*SCLVTL
Trigger: TAAGGTAACTAAGCAAGACAAGAACCTCATAAAGCC...TGCCAGTATTAGGGATGTTTCATGGGACATGGTAGCTGTCAGGTATGACATCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR CAA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCAATCTGCCAAAGAAGGTaGTTGGCTTCCCTGTGGACG +
Preference number: 5 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSICQRR*LASLWT
Trigger: CGTCCACAGGGAAGCCAACAACCTTCTTTGGCAGAT...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CAA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTATCTGCCAAAGAAGGTaGTTGGCTTCCCTGTGGACG +
Preference number: 5 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFICQRR*LASLWT
Trigger: CGTCCACAGGGAAGCCAACAACCTTCTTTGGCAGAT...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CAA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTTTCCGCAGTCTCTTCTaGTCAGCCCTAGTTTCTCGG +
Preference number: 5 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFFRSLF*SALVSR
Trigger: CCGAGAAACTAGGGCTGACAAGAAGAGACTGCGGAA...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CAA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCATTCCGCAGTCTCTTCTaGTCAGCCCTAGTTTCTCGG +
Preference number: 5 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSFRSLF*SALVSR
Trigger: CCGAGAAACTAGGGCTGACAAGAAGAGACTGCGGAA...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CAA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTTACACAAACATGGCATaGCAAGGCAAGTCTCCGGGC +
Preference number: 5 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFYTNMA*QGKSPG
Trigger: GCCCGGAGACTTGCCTTGCAATGCCATGTTTGTGTA...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000611933.4
ENST00000618427.4
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CAA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCATACACAAACATGGCATaGCAAGGCAAGTCTCCGGGC +
Preference number: 5 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSYTNMA*QGKSPG
Trigger: GCCCGGAGACTTGCCTTGCAATGCCATGTTTGTGTA...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611933.4
ENST00000618427.4
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CAA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTGCTTTGAAGATGGACTaGGGCTTCCTGGACTTGAAG +
Preference number: 5 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFALKMD*GFLDLK
Trigger: CTTCAAGTCCAGGAAGCCCAAGTCCATCTTCAAAGC...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CAA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCAGCTTTGAAGATGGACTaGGGCTTCCTGGACTTGAAG +
Preference number: 5 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSALKMD*GFLDLK
Trigger: CTTCAAGTCCAGGAAGCCCAAGTCCATCTTCAAAGC...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CAA 90 bp TACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTGACATCCTGTTACTTGAAGGCATTGTTTaGTGGACTCTCATGAGCTGG +
Preference number: 5 (lower is better)
Translates to: YCHEGSFITLVLLCDILLLEGIV*WTLMSW
Trigger: CCAGCTCATGAGAGTCCACAAAACAATGCCTTCAAG...TAACAGGATGTCACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR CAA 90 bp GCACTATTAGAATGTTGCATTGGACAAATCCTGAGTCTAAGCCAGTGTGGAAATACTGTTTCTTGGCACTaGAAGGCATTGTTTTGTGGA +
Preference number: 5 (lower is better)
Translates to: ALLECCIGQILSLSQCGNTVSWH*KALFCG
Trigger: TCCACAAAACAATGCCTTCAAGTGCCAAGAAACAGT...ATTTCCACACTGGCTTAGACTCAGGATTTGTCCAATGCAACATTCTAATAGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR CAA 90 bp GGAGTAACTTGTGGAACTAAGAAACCAACAACAAAGCAGTTATGTGGGCTAAAATCCTCTGGTCTATTCTaGGTTGAAGTCGCACTGTTT +
Preference number: 5 (lower is better)
Translates to: GVTCGTKKPTTKQLCGLKSSGLF*VEVALF
Trigger: AAACAGTGCGACTTCAACCAAGAATAGACCAGAGGA...TTTTAGCCCACATAACTGCTTTGTTGTTGGTTTCTTAGTTCCACAAGTTACTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR CAA 90 bp TTAGAATGTTGCATTGGACAAATCCTGAGTCTAAGCCAGTGTGGAAATTATATAGTTGAATCTCTGGCTTaGGCTGAAGATGGAGCATCG +
Preference number: 5 (lower is better)
Translates to: LECCIGQILSLSQCGNYIVESLA*AEDGAS
Trigger: CGATGCTCCATCTTCAGCCAAAGCCAGAGATTCAAC...TATATAATTTCCACACTGGCTTAGACTCAGGATTTGTCCAATGCAACATTCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR CAA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCAGTTGAATCTCTGGCTTaGGCTGAAGATGGAGCATCG +
Preference number: 5 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSVESLA*AEDGAS
Trigger: CGATGCTCCATCTTCAGCCAAAGCCAGAGATTCAAC...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CAA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTGTTGAATCTCTGGCTTaGGCTGAAGATGGAGCATCG +
Preference number: 5 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFVESLA*AEDGAS
Trigger: CGATGCTCCATCTTCAGCCAAAGCCAGAGATTCAAC...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CAA 90 bp GTTTGCAGTATATACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTTTCCGAATTTTCCGCTaGAGGCTCTGGATGTGCTTG +
Preference number: 5 (lower is better)
Translates to: VCSIYCHEGSFITLVLLCFRIFR*RLWMCL
Trigger: CAAGCACATCCAGAGCCTCAAGCGGAAAATTCGGAA...ACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTATATACTGCAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR CAA 90 bp TTAGAATGTTGCATTGGACAAATCCTGAGTCTAAGCCAGTGTGGAAATTATATATTCCGAATTTTCCGCTaGAGGCTCTGGATGTGCTTG +
Preference number: 5 (lower is better)
Translates to: LECCIGQILSLSQCGNYIFRIFR*RLWMCL
Trigger: CAAGCACATCCAGAGCCTCAAGCGGAAAATTCGGAA...TATATAATTTCCACACTGGCTTAGACTCAGGATTTGTCCAATGCAACATTCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR CAA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTTTCCGAATTTTCCGCTaGAGGCTCTGGATGTGCTTG +
Preference number: 5 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFFRIFR*RLWMCL
Trigger: CAAGCACATCCAGAGCCTCAAGCGGAAAATTCGGAA...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CAA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCATTCCGAATTTTCCGCTaGAGGCTCTGGATGTGCTTG +
Preference number: 5 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSFRIFR*RLWMCL
Trigger: CAAGCACATCCAGAGCCTCAAGCGGAAAATTCGGAA...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CAA 90 bp TTAGAATGTTGCATTGGACAAATCCTGAGTCTAAGCCAGTGTGGAAATTATATATCAGGATTAGAAGTCTaGTCACCATGTGAAGGCCGG +
Preference number: 5 (lower is better)
Translates to: LECCIGQILSLSQCGNYISGLEV*SPCEGR
Trigger: CCGGCCTTCACATGGTGACAAGACTTCTAATCCTGA...TATATAATTTCCACACTGGCTTAGACTCAGGATTTGTCCAATGCAACATTCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR CAA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCATCAGGATTAGAAGTCTaGTCACCATGTGAAGGCCGG +
Preference number: 5 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSSGLEV*SPCEGR
Trigger: CCGGCCTTCACATGGTGACAAGACTTCTAATCCTGA...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CAA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTTCAGGATTAGAAGTCTaGTCACCATGTGAAGGCCGG +
Preference number: 5 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFSGLEV*SPCEGR
Trigger: CCGGCCTTCACATGGTGACAAGACTTCTAATCCTGA...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CAA 90 bp GTTTGCAGTATATACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTTTTCTAGGTGGACCTTaGGGAGCACTCCCTTGTTCT +
Preference number: 5 (lower is better)
Translates to: VCSIYCHEGSFITLVLLCFLGGP*GALPCS
Trigger: AGAACAAGGGAGTGCTCCCAAAGGTCCACCTAGAAA...ACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTATATACTGCAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR CAA 90 bp TTAGAATGTTGCATTGGACAAATCCTGAGTCTAAGCCAGTGTGGAAATTATATATTTCTAGGTGGACCTTaGGGAGCACTCCCTTGTTCT +
Preference number: 5 (lower is better)
Translates to: LECCIGQILSLSQCGNYIFLGGP*GALPCS
Trigger: AGAACAAGGGAGTGCTCCCAAAGGTCCACCTAGAAA...TATATAATTTCCACACTGGCTTAGACTCAGGATTTGTCCAATGCAACATTCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR CAA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTTTTCTAGGTGGACCTTaGGGAGCACTCCCTTGTTCT +
Preference number: 5 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFFLGGP*GALPCS
Trigger: AGAACAAGGGAGTGCTCCCAAAGGTCCACCTAGAAA...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CAA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCATTTCTAGGTGGACCTTaGGGAGCACTCCCTTGTTCT +
Preference number: 5 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSFLGGP*GALPCS
Trigger: AGAACAAGGGAGTGCTCCCAAAGGTCCACCTAGAAA...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CAA 90 bp GCACTATTAGAATGTTGCATTGGACAAATCCTGAGTCTAAGCCAGTGTGGAAATGGCACTATTAGAATGTaGCATTGGACAAATCCTGAG +
Preference number: 5 (lower is better)
Translates to: ALLECCIGQILSLSQCGNGTIRM*HWTNPE
Trigger: CTCAGGATTTGTCCAATGCAACATTCTAATAGTGCC...ATTTCCACACTGGCTTAGACTCAGGATTTGTCCAATGCAACATTCTAATAGTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR CAA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCAAGTTTTGGCCACATCTaGCTTGCTGATGAGGACCTC +
Preference number: 5 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSSFGHI*LADEDL
Trigger: GAGGTCCTCATCAGCAAGCAAGATGTGGCCAAAACT...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CAA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTAGTTTTGGCCACATCTaGCTTGCTGATGAGGACCTC +
Preference number: 5 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFSFGHI*LADEDL
Trigger: GAGGTCCTCATCAGCAAGCAAGATGTGGCCAAAACT...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CAA 90 bp CCAAACAATGACAGAGATACAGGGTGCTTTATTTCAAAAGGGAGTTACAGTCTAGGCTGGGATTTACCTTaGAGCTGTTTACGACCTTTA +
Preference number: 5 (lower is better)
Translates to: PNNDRDTGCFISKGSYSLGWDLP*SCLRPL
Trigger: TAAAGGTCGTAAACAGCTCAAAGGTAAATCCCAGCC...TAGACTGTAACTCCCTTTTGAAATAAAGCACCCTGTATCTCTGTCATTGTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468696.1
CDS-3UTR CAA 90 bp TGTTGCATTGGACAAATCCTGAGTCTAAGCCAGTGTGGAAATTATATACATTTTCTTGAAGGCATTGTTTaGTGGACTCTCATGAGCTGG +
Preference number: 5 (lower is better)
Translates to: CCIGQILSLSQCGNYIHFLEGIV*WTLMSW
Trigger: CCAGCTCATGAGAGTCCACAAAACAATGCCTTCAAG...AAAATGTATATAATTTCCACACTGGCTTAGACTCAGGATTTGTCCAATGCAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR CAA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCACTTGAAGGCATTGTTTaGTGGACTCTCATGAGCTGG +
Preference number: 5 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSLEGIV*WTLMSW
Trigger: CCAGCTCATGAGAGTCCACAAAACAATGCCTTCAAG...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CAA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTCTTGAAGGCATTGTTTaGTGGACTCTCATGAGCTGG +
Preference number: 5 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFLEGIV*WTLMSW
Trigger: CCAGCTCATGAGAGTCCACAAAACAATGCCTTCAAG...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CAA 90 bp TACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTGACATCCTGTTAAAGTCGCACTGTTTCTaGGCACTTGAAGGCATTGTT +
Preference number: 5 (lower is better)
Translates to: YCHEGSFITLVLLCDILLKSHCF*ALEGIV
Trigger: AACAATGCCTTCAAGTGCCAAGAAACAGTGCGACTT...TAACAGGATGTCACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR CAA 90 bp GGCACTATTAGAATGTTGCATTGGACAAATCCTGAGTCTAAGCCAGTGTGGAAATATGAGGTTCTTGTCTaGCTTAGTTACCTTAGAATC +
Preference number: 5 (lower is better)
Translates to: GTIRMLHWTNPESKPVWKYEVLV*LSYLRI
Trigger: GATTCTAAGGTAACTAAGCAAGACAAGAACCTCATA...TTTCCACACTGGCTTAGACTCAGGATTTGTCCAATGCAACATTCTAATAGTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR CAA 90 bp ACTTCTTTCTTTTCATCTGGTAAAAGGGCCCTAACAGGCTCAGTCTCATTAGAGAATACTCATCTGCCATaGGTATCCTATCTTCCTTTT +
Preference number: 5 (lower is better)
Translates to: TSFFSSGKRALTGSVSLENTHLP*VSYLPF
Trigger: AAAAGGAAGATAGGATACCAATGGCAGATGAGTATT...CTCTAATGAGACTGAGCCTGTTAGGGCCCTTTTACCAGATGAAAAGAAAGAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489341.5
ENST00000622363.4
CDS-3UTR CAA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTATCAGATTCGAGGGCTaGCAGCTTCAGCAAGGAATT +
Preference number: 5 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFIRFEG*QLQQGI
Trigger: AATTCCTTGCTGAAGCTGCAAGCCCTCGAATCTGAT...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614220.4
ENST00000621119.4
CDS-3UTR CAA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCAATCAGATTCGAGGGCTaGCAGCTTCAGCAAGGAATT +
Preference number: 5 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSIRFEG*QLQQGI
Trigger: AATTCCTTGCTGAAGCTGCAAGCCCTCGAATCTGAT...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614220.4
ENST00000621119.4
CDS-3UTR CAA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTGGCTTTATGAGGTTCTaGTCTTGCTTAGTTACCCGG +
Preference number: 5 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFGFMRF*SCLVTR
Trigger: CCGGGTAACTAAGCAAGACAAGAACCTCATAAAGCC...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611933.4
CDS TCA 90 bp CATGCAAGTATCCTGACTTACAATTGTTGGAATAAGGGAAGGTGTTaGCAAGATTTGCTTGATAATTCTGTATCGGTCATAAAGCGGCTT +
Preference number: 5 (lower is better)
Translates to: HASILTYNCWNKGRC*QDLLDNSVSVIKRL
Trigger: AAGCCGCTTTATGACCGATACAGAATTATCAAGCAAATCTTGTCAACACCTTCCCTTATTCCAACAATTGTAAGTCAGGATACTTGCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR CAA 90 bp TTAGAATGTTGCATTGGACAAATCCTGAGTCTAAGCCAGTGTGGAAATTATATAAAGTCGCACTGTTTCTaGGCACTTGAAGGCATTGTT +
Preference number: 5 (lower is better)
Translates to: LECCIGQILSLSQCGNYIKSHCF*ALEGIV
Trigger: AACAATGCCTTCAAGTGCCAAGAAACAGTGCGACTT...TATATAATTTCCACACTGGCTTAGACTCAGGATTTGTCCAATGCAACATTCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR CAA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTAAGTCGCACTGTTTCTaGGCACTTGAAGGCATTGTT +
Preference number: 5 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFKSHCF*ALEGIV
Trigger: AACAATGCCTTCAAGTGCCAAGAAACAGTGCGACTT...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CAA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCAAAGTCGCACTGTTTCTaGGCACTTGAAGGCATTGTT +
Preference number: 5 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSKSHCF*ALEGIV
Trigger: AACAATGCCTTCAAGTGCCAAGAAACAGTGCGACTT...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CAA 90 bp GTTTGCAGTATATACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTCTGGTCTATTCTTGGTaGAAGTCGCACTGTTTCTTG +
Preference number: 5 (lower is better)
Translates to: VCSIYCHEGSFITLVLLCLVYSW*KSHCFL
Trigger: CAAGAAACAGTGCGACTTCAACCAAGAATAGACCAG...ACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTATATACTGCAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR CAA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCACTGGTCTATTCTTGGTaGAAGTCGCACTGTTTCTTG +
Preference number: 5 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSLVYSW*KSHCFL
Trigger: CAAGAAACAGTGCGACTTCAACCAAGAATAGACCAG...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CAA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTCTGGTCTATTCTTGGTaGAAGTCGCACTGTTTCTTG +
Preference number: 5 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFLVYSW*KSHCFL
Trigger: CAAGAAACAGTGCGACTTCAACCAAGAATAGACCAG...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CAA 90 bp GTTTGCAGTATATACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTTCCTCTGGTCTATTCTaGGTTGAAGTCGCACTGTTT +
Preference number: 5 (lower is better)
Translates to: VCSIYCHEGSFITLVLLCSSGLF*VEVALF
Trigger: AAACAGTGCGACTTCAACCAAGAATAGACCAGAGGA...ACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTATATACTGCAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR CAA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCATCCTCTGGTCTATTCTaGGTTGAAGTCGCACTGTTT +
Preference number: 5 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSSSGLF*VEVALF
Trigger: AAACAGTGCGACTTCAACCAAGAATAGACCAGAGGA...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CAA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTTCCTCTGGTCTATTCTaGGTTGAAGTCGCACTGTTT +
Preference number: 5 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFSSGLF*VEVALF
Trigger: AAACAGTGCGACTTCAACCAAGAATAGACCAGAGGA...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CAA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCAGAACCTCAAATAGTTTaGGCCACATCTTGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSEPQIV*ATSCLL
Trigger: CAGCAAGCAAGATGTGGCCAAAACTATTTGAGGTTC...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CAA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTGAACCTCAAATAGTTTaGGCCACATCTTGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFEPQIV*ATSCLL
Trigger: CAGCAAGCAAGATGTGGCCAAAACTATTTGAGGTTC...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CAA 90 bp GTTTGCAGTATATACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTACTGTTTCTTGGCACTaGAAGGCATTGTTTTGTGGA +
Preference number: 5 (lower is better)
Translates to: VCSIYCHEGSFITLVLLCTVSWH*KALFCG
Trigger: TCCACAAAACAATGCCTTCAAGTGCCAAGAAACAGT...ACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTATATACTGCAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR CAA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTACTGTTTCTTGGCACTaGAAGGCATTGTTTTGTGGA +
Preference number: 5 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFTVSWH*KALFCG
Trigger: TCCACAAAACAATGCCTTCAAGTGCCAAGAAACAGT...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CAA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCAACTGTTTCTTGGCACTaGAAGGCATTGTTTTGTGGA +
Preference number: 5 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSTVSWH*KALFCG
Trigger: TCCACAAAACAATGCCTTCAAGTGCCAAGAAACAGT...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CAA 90 bp TACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTGACATCCTGTTAGGCTTTATGAGGTTCTaGTCTTGCTTAGTTACCTTA +
Preference number: 5 (lower is better)
Translates to: YCHEGSFITLVLLCDILLGFMRF*SCLVTL
Trigger: TAAGGTAACTAAGCAAGACAAGAACCTCATAAAGCC...TAACAGGATGTCACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR CAA 90 bp TCTGCCATTGGTATCCTATCTTCCTTTTGTGGACTTCTTCCTGTTTGTTTAAAATATCCTATCTTCCTTTaGTGGACTTCTTCCTGTTTG +
Preference number: 5 (lower is better)
Translates to: SAIGILSSFCGLLPVCLKYPIFL*WTSSCL
Trigger: CAAACAGGAAGAAGTCCACAAAAGGAAGATAGGATA...TTTTAAACAAACAGGAAGAAGTCCACAAAAGGAAGATAGGATACCAATGGCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489341.5
ENST00000622363.4
CDS-3UTR CAA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTCAGCTTCTTCCTGGTTaGTTAAAAATGCAGAGCACA +
Preference number: 5 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFQLLPG*LKMQST
Trigger: TGTGCTCTGCATTTTTAACAAACCAGGAAGAAGCTG...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000614220.4
ENST00000621119.4
CDS-3UTR CAA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCACAGCTTCTTCCTGGTTaGTTAAAAATGCAGAGCACA +
Preference number: 5 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSQLLPG*LKMQST
Trigger: TGTGCTCTGCATTTTTAACAAACCAGGAAGAAGCTG...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000614220.4
ENST00000621119.4
CDS TCA 90 bp GTTATTAGGTGGTTCTTCCATAAAAGAGTTTGGTGTTCAATAAGTTaGGAAATGCTGGGAATGATACAGGACATTTCAATCCATGAGTGT +
Preference number: 5 (lower is better)
Translates to: VIRWFFHKRVWCSIS*EMLGMIQDISIHEC
Trigger: ACACTCATGGATTGAAATGTCCTGTATCATTCCCAGCATTTCTCAACTTATTGAACACCAAACTCTTTTATGGAAGAACCACCTAATAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510215.6
CDS-3UTR CAA 90 bp TACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTGACATCCTGTTATATGAGGTTCTTGTCTaGCTTAGTTACCTTAGAATC +
Preference number: 5 (lower is better)
Translates to: YCHEGSFITLVLLCDILLYEVLV*LSYLRI
Trigger: GATTCTAAGGTAACTAAGCAAGACAAGAACCTCATA...TAACAGGATGTCACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR CAA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCAGGCTTTATGAGGTTCTaGTCTTGCTTAGTTACCTTA +
Preference number: 5 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSGFMRF*SCLVTL
Trigger: TAAGGTAACTAAGCAAGACAAGAACCTCATAAAGCC...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CAA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTGGCTTTATGAGGTTCTaGTCTTGCTTAGTTACCTTA +
Preference number: 5 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFGFMRF*SCLVTL
Trigger: TAAGGTAACTAAGCAAGACAAGAACCTCATAAAGCC...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CAA 90 bp GTTTGCAGTATATACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTCAGAAAGGCTCTGTTTaGTCTAGCTGTGTTACAAAT +
Preference number: 5 (lower is better)
Translates to: VCSIYCHEGSFITLVLLCQKGSV*SSCVTN
Trigger: ATTTGTAACACAGCTAGACAAAACAGAGCCTTTCTG...ACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTATATACTGCAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR CAA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTTATCCTATCTTCCTTTaGTGGACTTCTTCCTGTTTG +
Preference number: 5 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFYPIFL*WTSSCL
Trigger: CAAACAGGAAGAAGTCCACAAAAGGAAGATAGGATA...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CAA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCATATGAGGTTCTTGTCTaGCTTAGTTACCCGGTATTT +
Preference number: 5 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSYEVLV*LSYPVF
Trigger: AAATACCGGGTAACTAAGCAAGACAAGAACCTCATA...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611933.4
CDS-3UTR CAA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTTATGAGGTTCTTGTCTaGCTTAGTTACCTTAGAATC +
Preference number: 5 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFYEVLV*LSYLRI
Trigger: GATTCTAAGGTAACTAAGCAAGACAAGAACCTCATA...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CAA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCATATGAGGTTCTTGTCTaGCTTAGTTACCTTAGAATC +
Preference number: 5 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSYEVLV*LSYLRI
Trigger: GATTCTAAGGTAACTAAGCAAGACAAGAACCTCATA...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CAA 90 bp GTTTGCAGTATATACTGCCATGAAGGGTCTTTTATAACTCTTGTACTACTATGTGTTGACAAGATTTGCTaGATAATTCTGTATCGGTCA +
Preference number: 5 (lower is better)
Translates to: VCSIYCHEGSFITLVLLCVDKIC*IILYRS
Trigger: TGACCGATACAGAATTATCAAGCAAATCTTGTCAAC...ACATAGTAGTACAAGAGTTATAAAAGACCCTTCATGGCAGTATATACTGCAAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS-3UTR CAA 90 bp TGTTGCATTGGACAAATCCTGAGTCTAAGCCAGTGTGGAAATTATATACATTTTGTTGACAAGATTTGCTaGATAATTCTGTATCGGTCA +
Preference number: 5 (lower is better)
Translates to: CCIGQILSLSQCGNYIHFVDKIC*IILYRS
Trigger: TGACCGATACAGAATTATCAAGCAAATCTTGTCAAC...AAAATGTATATAATTTCCACACTGGCTTAGACTCAGGATTTGTCCAATGCAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435852.6
CDS-3UTR CAA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCAGTTGACAAGATTTGCTaGATAATTCTGTATCGGTCA +
Preference number: 5 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSVDKIC*IILYRS
Trigger: TGACCGATACAGAATTATCAAGCAAATCTTGTCAAC...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CAA 90 bp GAGTTACATTTTAATAGCAACTGTGTACATGTCACGAAACCATTTCCCTTATCAAATACTCATCTGCCATaGGTATCCTATCTTCCTTTT +
Preference number: 5 (lower is better)
Translates to: ELHFNSNCVHVTKPFPLSNTHLP*VSYLPF
Trigger: AAAAGGAAGATAGGATACCAATGGCAGATGAGTATT...TGATAAGGGAAATGGTTTCGTGACATGTACACAGTTGCTATTAAAATGTAACTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS-3UTR CAA 90 bp AAAATACTTGTATTGACTATGAGTTTTCTGCTTGGCATGGAGGACACTGAATTTAATACTCATCTGCCATaGGTATCCTATCTTCCTTTT +
Preference number: 5 (lower is better)
Translates to: KILVLTMSFLLGMEDTEFNTHLP*VSYLPF
Trigger: AAAAGGAAGATAGGATACCAATGGCAGATGAGTATT...AAATTCAGTGTCCTCCATGCCAAGCAGAAAACTCATAGTCAATACAAGTATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS TCA 72 bp CAAGCACGCTCTGGGTTGATGCTGGCGCCGGGTCCTTaGCTCCATGCACCTGAGCAGCTTCTTCCTGGTTTG +
Preference number: 6 (lower is better)
Translates to: QARSGLMLAPGP*LHAPEQLLPGL
Trigger: CAAACCAGGAAGAAGCTGCTCAGGTGCATGGAGTCAAGGACCCGGCGCCAGCATCAACCCAGAGCGTGCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000513377.1
ENST00000614220.4
ENST00000621119.4
CDS GCA 72 bp CACCTGGAGCAGGAAGTCCAGGCCTCATCTTCGGCCTaGAGATGCACACTTTGGCACACCTCTCTCCCCTTC +
Preference number: 6 (lower is better)
Translates to: HLEQEVQASSSA*RCTLWHTSLPF
Trigger: GAAGGGGAGAGAGGTGTGCCAAAGTGTGCATCTGCAGGCCGAAGATGAGGCCTGGACTTCCTGCTCCAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503444.1
ENST00000512919.5
ENST00000618427.4
ENST00000619059.4
ENST00000622363.4
CDS GCA 72 bp TCTCCGGGAGTTAGAGCACATACACAAACATGGCATTaGAAGGCAAGTCTCCGGGCTCGCCCGGCACGCTCG +
Preference number: 6 (lower is better)
Translates to: SPGVRAHTQTWH*KASLRARPARS
Trigger: CGAGCGTGCCGGGCGAGCCCGGAGACTTGCCTTGCAATGCCATGTTTGTGTATGTGCTCTAACTCCCGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611933.4
ENST00000618427.4
ENST00000622363.4
CDS CCA 72 bp TTACCTGCAGAATCTGTCCCATCGGCAAGCACGCTCTaGGTTGATGCTGGCGCCGGGTCCTTGACTCCATGC +
Preference number: 6 (lower is better)
Translates to: LPAESVPSASTL*VDAGAGSLTPC
Trigger: GCATGGAGTCAAGGACCCGGCGCCAGCATCAACCCAGAGCGTGCTTGCCGATGGGACAGATTCTGCAGGTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489341.5
CDS GCA 72 bp GAGTGGAGGTCTTCTGGTGCACTGTCGGCCTCATTCTaGCCATCTTTGTGGACTGGTGAGGGGTCTGGGCAA +
Preference number: 6 (lower is better)
Translates to: EWRSSGALSASF*PSLWTGEGSGQ
Trigger: TTGCCCAGACCCCTCACCAGTCCACAAAGATGGGCAGAATGAGGCCGACAGTGCACCAGAAGACCTCCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507568.1
CDS CCA 72 bp GTCTCCAGCAGGTCTAGCAGGCTAGAGAGGCCATCCTaGGGCTATGTCAGGGCTAAGGTCACTGGAAGACAC +
Preference number: 6 (lower is better)
Translates to: VSSRSSRLERPS*GYVRAKVTGRH
Trigger: GTGTCTTCCAGTGACCTTAGCCCTGACATAGCCCCAGGATGGCCTCTCTAGCCTGCTAGACCTGCTGGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507862.1
CDS CCA 72 bp GCAAGCACCTTCCTCCACTGCCTGGCAGGAAGAGGGTaGTGGCAACAGCTGCTTCAGGGAAAGAACTGGTTG +
Preference number: 6 (lower is better)
Translates to: ASTFLHCLAGRG*WQQLLQGKNWL
Trigger: CAACCAGTTCTTTCCCTGAAGCAGCTGTTGCCACCACCCTCTTCCTGCCAGGCAGTGGAGGAAGGTGCTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513377.1
CDS TCA 72 bp GTTGATGCTGGCGCCGGGTCCTTGACTCCATGCACCTaGGCAGCTTCTTCCTTTAGAATGCCCTGTAGGGTC +
Preference number: 6 (lower is better)
Translates to: VDAGAGSLTPCT*AASSFRMPCRV
Trigger: GACCCTACAGGGCATTCTAAAGGAAGAAGCTGCTCAGGTGCATGGAGTCAAGGACCCGGCGCCAGCATCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477101.1
CDS TCA 72 bp CAAGCACGCTCTGGGTTGATGCTGGCGCCGGGTCCTTaGCTCCATGCACCTGAGCAGCTTCTTCCTTTAGAA +
Preference number: 6 (lower is better)
Translates to: QARSGLMLAPGP*LHAPEQLLPLE
Trigger: TTCTAAAGGAAGAAGCTGCTCAGGTGCATGGAGTCAAGGACCCGGCGCCAGCATCAACCCAGAGCGTGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477101.1
CDS GCA 72 bp ATCAGCCAAGTCTGGCCGGGGAGCCGTCTCCCTGATTaGTCTCCGGGAGTTAGAGCACATACACAAACATGG +
Preference number: 6 (lower is better)
Translates to: ISQVWPGSRLPD*SPGVRAHTQTW
Trigger: CCATGTTTGTGTATGTGCTCTAACTCCCGGAGAGCAATCAGGGAGACGGCTCCCCGGCCAGACTTGGCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000611933.4
ENST00000614220.4
ENST00000618427.4
ENST00000618804.5
ENST00000621119.4
ENST00000622363.4
CDS GCA 72 bp TGCCAGGCTCCCATCAGAATGTCATGCCAACCTTTCTaGAGGCTGCTTTCCACCCACATCCTTGCCCTGGAT +
Preference number: 6 (lower is better)
Translates to: CQAPIRMSCQPF*RLLSTHILALD
Trigger: ATCCAGGGCAAGGATGTGGGTGGAAAGCAGCCTGCAGAAAGGTTGGCATGACATTCTGATGGGAGCCTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507862.1
CDS TCA 72 bp CTCCCCTTCTCTCAGGCTCTGTTACAGTGGTGCTGCTaGAGGAATTATCCTGAAGGCTTGGGCTGCTGTCTG +
Preference number: 6 (lower is better)
Translates to: LPFSQALLQWCC*RNYPEGLGCCL
Trigger: CAGACAGCAGCCCAAGCCTTCAGGATAATTCCTTCAGCAGCACCACTGTAACAGAGCCTGAGAGAAGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503444.1
CDS GCA 72 bp AGACAGCTGCAATGCCAGGCTCCCATCAGAATGTCATaGCAACCTTTCTGCAGGCTGCTTTCCACCCACATC +
Preference number: 6 (lower is better)
Translates to: RQLQCQAPIRMS*QPFCRLLSTHI
Trigger: GATGTGGGTGGAAAGCAGCCTGCAGAAAGGTTGGCATGACATTCTGATGGGAGCCTGGCATTGCAGCTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507862.1
CDS CAA 90 bp GAGTGGAGGTCTTCTGGTGCACTGTCGGCCTCATTCTGCCCATCTTaGTGGACTGGTGAGGGGTCTGGGCAAATGAGACAAATCATCAAG +
Preference number: 6 (lower is better)
Translates to: EWRSSGALSASFCPS*WTGEGSGQMRQIIK
Trigger: CTTGATGATTTGTCTCATTTGCCCAGACCCCTCACCAGTCCACAAAGATGGGCAGAATGAGGCCGACAGTGCACCAGAAGACCTCCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507568.1
CDS TCA 72 bp GTTGATGCTGGCGCCGGGTCCTTGACTCCATGCACCTaGGCAGCTTCTTCCTGGTTTGTTAAAAATGCAGAG +
Preference number: 6 (lower is better)
Translates to: VDAGAGSLTPCT*AASSWFVKNAE
Trigger: CTCTGCATTTTTAACAAACCAGGAAGAAGCTGCTCAGGTGCATGGAGTCAAGGACCCGGCGCCAGCATCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000513377.1
ENST00000614220.4
ENST00000621119.4
CDS TCA 72 bp CTGGATCTTCGTCACACTCTGTTACAGTGGTGCTGCTaGAGGAATTATCCTGAAGGCTTGGGCTGCTGTCTG +
Preference number: 6 (lower is better)
Translates to: LDLRHTLLQWCC*RNYPEGLGCCL
Trigger: CAGACAGCAGCCCAAGCCTTCAGGATAATTCCTTCAGCAGCACCACTGTAACAGAGTGTGACGAAGATCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468840.6
ENST00000470220.5
CDS TCA 72 bp ACCCCCTTGGTTGAAGTCGCACTGTTTCTTGGCACTTaGAGGCATTGTTTTGTGGACTCTCATGAGCTGGTG +
Preference number: 6 (lower is better)
Translates to: TPLVEVALFLGT*RHCFVDSHELV
Trigger: CACCAGCTCATGAGAGTCCACAAAACAATGCCTTCAAGTGCCAAGAAACAGTGCGACTTCAACCAAGGGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470220.5
CDS CAA 90 bp CACAGAATCTGCACCTGCCATGCTTGGTTGAAGTCGCACTGTTTCTaGGCACTTGAAGGCATTGTTTTGTGGACTCTCATGAGCTGGTGT +
Preference number: 6 (lower is better)
Translates to: HRICTCHAWLKSHCF*ALEGIVLWTLMSWC
Trigger: ACACCAGCTCATGAGAGTCCACAAAACAATGCCTTCAAGTGCCAAGAAACAGTGCGACTTCAACCAAGCATGGCAGGTGCAGATTCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507862.1
CDS TCA 72 bp CCATGCTTGGTTGAAGTCGCACTGTTTCTTGGCACTTaGAGGCATTGTTTTGTGGACTCTCATGAGCTGGTG +
Preference number: 6 (lower is better)
Translates to: PCLVEVALFLGT*RHCFVDSHELV
Trigger: CACCAGCTCATGAGAGTCCACAAAACAATGCCTTCAAGTGCCAAGAAACAGTGCGACTTCAACCAAGCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507862.1
CDS CAA 90 bp AGTTCACCCCCTCATTTAAGTCCTGCCGAGTTTCAAAAGCATCCTTaGGCGAAATGGCAGTCCTCTGGTCTATTCTTGGTTGAAGTCGCA +
Preference number: 6 (lower is better)
Translates to: SSPPHLSPAEFQKHP*AKWQSSGLFLVEVA
Trigger: TGCGACTTCAACCAAGAATAGACCAGAGGACTGCCATTTCGCCAAAGGATGCTTTTGAAACTCGGCAGGACTTAAATGAGGGGGTGAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510215.6
CDS CAA 90 bp GTCAATCTATATAGTTCACCCCCTTGGTTGAAGTCGCACTGTTTCTaGGCACTTGAAGGCATTGTTTTGTGGACTCTCATGAGCTGGTGT +
Preference number: 6 (lower is better)
Translates to: VNLYSSPPWLKSHCF*ALEGIVLWTLMSWC
Trigger: ACACCAGCTCATGAGAGTCCACAAAACAATGCCTTCAAGTGCCAAGAAACAGTGCGACTTCAACCAAGGGGGTGAACTATATAGATTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470220.5
CDS CAA 90 bp GCAAGGAATTCTCATTTAAGTCCTGCCGAGTTTCAAAAGCATCCTTaGGCGAAATGGCAGTCCTCTGGTCTATTCTTGGTTGAAGTCGCA +
Preference number: 6 (lower is better)
Translates to: ARNSHLSPAEFQKHP*AKWQSSGLFLVEVA
Trigger: TGCGACTTCAACCAAGAATAGACCAGAGGACTGCCATTTCGCCAAAGGATGCTTTTGAAACTCGGCAGGACTTAAATGAGAATTCCTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614220.4
ENST00000621119.4
CDS TCA 72 bp GAATGTGGGTCAATCTATATAGTTCACCCCCTTGGTTaGAGTCGCACTGTTTCTTGGCACTTGAAGGCATTG +
Preference number: 6 (lower is better)
Translates to: ECGSIYIVHPLG*SRTVSWHLKAL
Trigger: CAATGCCTTCAAGTGCCAAGAAACAGTGCGACTTCAACCAAGGGGGTGAACTATATAGATTGACCCACATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470220.5
CDS GCA 72 bp TCTGTTTATTTCCAGAAGAGACTTTCCATAGACAGCTaGAATGCCAGGCTCCCATCAGAATGTCATGCCAAC +
Preference number: 6 (lower is better)
Translates to: SVYFQKRLSIDS*NARLPSECHAN
Trigger: GTTGGCATGACATTCTGATGGGAGCCTGGCATTGCAGCTGTCTATGGAAAGTCTCTTCTGGAAATAAACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507862.1
CDS CAA 72 bp CATCCACCCTCTTTGATGATCTCTGTCCCATTCATATaGCACGTCCTTCAAGTTTCCCCAAGGTCTTTTCTG +
Preference number: 6 (lower is better)
Translates to: HPPSLMISVPFI*HVLQVSPRSFL
Trigger: CAGAAAAGACCTTGGGGAAACTTGAAGGACGTGCAATATGAATGGGACAGAGATCATCAAAGAGGGTGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510215.6
CDS CAA 90 bp CTGTGTGAAAGAATGTGGGTCAATCTATATAGTTCACCCCCTTGGTaGAAGTCGCACTGTTTCTTGGCACTTGAAGGCATTGTTTTGTGG +
Preference number: 6 (lower is better)
Translates to: LCERMWVNLYSSPPW*KSHCFLALEGIVLW
Trigger: CCACAAAACAATGCCTTCAAGTGCCAAGAAACAGTGCGACTTCAACCAAGGGGGTGAACTATATAGATTGACCCACATTCTTTCACACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470220.5
CDS GCA 72 bp GTTAAAAATGCAGAGCACAGATCAGATTCGAGGGCTTaGAGCTTCAGCAAGGAATTCTCATTTAAGTCCTGC +
Preference number: 6 (lower is better)
Translates to: VKNAEHRSDSRA*SFSKEFSFKSC
Trigger: GCAGGACTTAAATGAGAATTCCTTGCTGAAGCTGCAAGCCCTCGAATCTGATCTGTGCTCTGCATTTTTAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614220.4
ENST00000621119.4
CDS CAA 72 bp AGAATGTGGGTCAATCTATATAGTTCACCCCCTTGGTaGAAGTCGCACTGTTTCTTGGCACTTGAAGGCATT +
Preference number: 6 (lower is better)
Translates to: RMWVNLYSSPPW*KSHCFLALEGI
Trigger: AATGCCTTCAAGTGCCAAGAAACAGTGCGACTTCAACCAAGGGGGTGAACTATATAGATTGACCCACATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470220.5
CDS TCA 72 bp ATTTATATCCTACTGCTCAAAGTCATTGCCAAGGTCTaGTTGCAAAAATTCAAAACATTGCAACCTTGGGCA +
Preference number: 6 (lower is better)
Translates to: IYILLLKVIAKV*LQKFKTLQPWA
Trigger: TGCCCAAGGTTGCAATGTTTTGAATTTTTGCAATCAGACCTTGGCAATGACTTTGAGCAGTAGGATATAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477101.1
CDS TCA 72 bp ATCCTGACTTACAATTGTTGGAATAAGGGAAGGTGTTaGCAAGATTTGCTTGATAATTCTGTATCGGTCATA +
Preference number: 6 (lower is better)
Translates to: ILTYNCWNKGRC*QDLLDNSVSVI
Trigger: TATGACCGATACAGAATTATCAAGCAAATCTTGTCAACACCTTCCCTTATTCCAACAATTGTAAGTCAGGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422313.6
CDS TCA 72 bp TGGTTCTTCCATAAAAGAGTTTGGTGTTCAATAAGTTaGGAAATGCTGGGAATGATACAGGACATTTCAATC +
Preference number: 6 (lower is better)
Translates to: WFFHKRVWCSIS*EMLGMIQDISI
Trigger: GATTGAAATGTCCTGTATCATTCCCAGCATTTCTCAACTTATTGAACACCAAACTCTTTTATGGAAGAACCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510215.6
CDS GCA 72 bp TGTGGGAGTTATTTATATCCTACTGCTCAAAGTCATTaGCAAGGTCTGATTGCAAAAATTCAAAACATTGCA +
Preference number: 6 (lower is better)
Translates to: CGSYLYPTAQSH*QGLIAKIQNIA
Trigger: TGCAATGTTTTGAATTTTTGCAATCAGACCTTGGCAATGACTTTGAGCAGTAGGATATAAATAACTCCCACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477101.1
CDS CAA 72 bp ATGTGGGAGTTATTTATATCCTACTGCTCAAAGTCATaGCCAAGGTCTGATTGCAAAAATTCAAAACATTGC +
Preference number: 6 (lower is better)
Translates to: MWELFISYCSKS*PRSDCKNSKHC
Trigger: GCAATGTTTTGAATTTTTGCAATCAGACCTTGGCAATGACTTTGAGCAGTAGGATATAAATAACTCCCACAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477101.1