Pregenerated sensors for FAM138D (Homo sapiens)
Ensembl gene IDs: ENSG00000249054, ENSG00000262927Ensembl transcript IDs: ENST00000504074.1, ENST00000546223.1, ENST00000570604.1
Found 11 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AATTGCCGTGCTCCTTGGAGGTGGGAAGAGCAGGTGGAGGACACGTaGGAGGTTTTAGAGACAAGCCTGGAGGCAGCATGCGTCACTCCC | + |
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Preference number: 5 (lower is better) Translates to: NCRAPWRWEEQVEDT*EVLETSLEAACVTP Trigger: GGGAGTGACGCATGCTGCCTCCAGGCTTGTCTCTAAAACCTCCCACGTGTCCTCCACCTGCTCTTCCCACCTCCAAGGAGCACGGCAATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000504074.1 ENST00000546223.1 |
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| CDS GCA 90 bp | CTCCCATCTATGGTTCTGCCATCACTAATCTGGGTCTTCCACAATTaGCGTGCTCCTTGGAGGTGGGAAGAGCAGGTGGAGGACACGTGG | + |
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Preference number: 5 (lower is better) Translates to: LPSMVLPSLIWVFHN*RAPWRWEEQVEDTW Trigger: CCACGTGTCCTCCACCTGCTCTTCCCACCTCCAAGGAGCACGGCAATTGTGGAAGACCCAGATTAGTGATGGCAGAACCATAGATGGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000504074.1 ENST00000546223.1 |
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| CDS GCA 90 bp | ATCTATGGTTCTGCCATCACTAATCTGGGTCTTCCACAATTGCCGTaGTCCTTGGAGGTGGGAAGAGCAGGTGGAGGACACGTGGGAGGT | + |
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Preference number: 5 (lower is better) Translates to: IYGSAITNLGLPQLP*SLEVGRAGGGHVGG Trigger: ACCTCCCACGTGTCCTCCACCTGCTCTTCCCACCTCCAAGGAGCACGGCAATTGTGGAAGACCCAGATTAGTGATGGCAGAACCATAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000504074.1 ENST00000546223.1 |
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| CDS CCA 90 bp | GTTCTGCCATCACTAATCTGGGTCTTCCACAATTGCCGTGCTCCTTaGAGGTGGGAAGAGCAGGTGGAGGACACGTGGGAGGTTTTAGAG | + |
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Preference number: 5 (lower is better) Translates to: VLPSLIWVFHNCRAP*RWEEQVEDTWEVLE Trigger: CTCTAAAACCTCCCACGTGTCCTCCACCTGCTCTTCCCACCTCCAAGGAGCACGGCAATTGTGGAAGACCCAGATTAGTGATGGCAGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000504074.1 ENST00000546223.1 |
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| CDS CCA 72 bp | TCACTAATCTGGGTCTTCCACAATTGCCGTGCTCCTTaGAGGTGGGAAGAGCAGGTGGAGGACACGTGGGAG | + |
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Preference number: 6 (lower is better) Translates to: SLIWVFHNCRAP*RWEEQVEDTWE Trigger: CTCCCACGTGTCCTCCACCTGCTCTTCCCACCTCCAAGGAGCACGGCAATTGTGGAAGACCCAGATTAGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000504074.1 ENST00000546223.1 |
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| CDS CAA 90 bp | CCTCCCATCTATGGTTCTGCCATCACTAATCTGGGTCTTCCACAATaGCCGTGCTCCTTGGAGGTGGGAAGAGCAGGTGGAGGACACGTG | + |
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Preference number: 6 (lower is better) Translates to: PPIYGSAITNLGLPQ*PCSLEVGRAGGGHV Trigger: CACGTGTCCTCCACCTGCTCTTCCCACCTCCAAGGAGCACGGCAATTGTGGAAGACCCAGATTAGTGATGGCAGAACCATAGATGGGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000504074.1 ENST00000546223.1 |
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| CDS CAA 90 bp | GGTTCTGCCATCACTAATCTGGGTCTTCCACAATTGCCGTGCTCCTaGGAGGTGGGAAGAGCAGGCGGAGGACACGTGGGAGGTTTTAGA | + |
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Preference number: 6 (lower is better) Translates to: GSAITNLGLPQLPCS*EVGRAGGGHVGGFR Trigger: TCTAAAACCTCCCACGTGTCCTCCGCCTGCTCTTCCCACCTCCAAGGAGCACGGCAATTGTGGAAGACCCAGATTAGTGATGGCAGAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000570604.1 |
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| CDS CCA 72 bp | ATCTGGGTCTTCCACAATTGCCGTGCTCCTTGGAGGTaGGAAGAGCAGGTGGAGGACACGTGGGAGGTTTTA | + |
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Preference number: 6 (lower is better) Translates to: IWVFHNCRAPWR*EEQVEDTWEVL Trigger: TAAAACCTCCCACGTGTCCTCCACCTGCTCTTCCCACCTCCAAGGAGCACGGCAATTGTGGAAGACCCAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000504074.1 ENST00000546223.1 |
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| CDS CAA 90 bp | GGTTCTGCCATCACTAATCTGGGTCTTCCACAATTGCCGTGCTCCTaGGAGGTGGGAAGAGCAGGTGGAGGACACGTGGGAGGTTTTAGA | + |
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Preference number: 6 (lower is better) Translates to: GSAITNLGLPQLPCS*EVGRAGGGHVGGFR Trigger: TCTAAAACCTCCCACGTGTCCTCCACCTGCTCTTCCCACCTCCAAGGAGCACGGCAATTGTGGAAGACCCAGATTAGTGATGGCAGAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000504074.1 ENST00000546223.1 |
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| CDS GCA 72 bp | ATGGTTCTGCCATCACTAATCTGGGTCTTCCACAATTaGCGTGCTCCTTGGAGGTGGGAAGAGCAGGTGGAG | + |
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Preference number: 6 (lower is better) Translates to: MVLPSLIWVFHN*RAPWRWEEQVE Trigger: CTCCACCTGCTCTTCCCACCTCCAAGGAGCACGGCAATTGTGGAAGACCCAGATTAGTGATGGCAGAACCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000504074.1 ENST00000546223.1 |
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| CDS CAA 72 bp | TATGGTTCTGCCATCACTAATCTGGGTCTTCCACAATaGCCGTGCTCCTTGGAGGTGGGAAGAGCAGGTGGA | + |
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Preference number: 6 (lower is better) Translates to: YGSAITNLGLPQ*PCSLEVGRAGG Trigger: TCCACCTGCTCTTCCCACCTCCAAGGAGCACGGCAATTGTGGAAGACCCAGATTAGTGATGGCAGAACCATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000504074.1 ENST00000546223.1 |
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