Pregenerated sensors for FAM138B (Homo sapiens)
Ensembl gene IDs: ENSG00000226516Ensembl transcript IDs: ENST00000432583.2, ENST00000446648.6
Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TGGCCAATGCTGGCTCCGATGGCCACATCTCACTGCAGGGGCAGCTaGGAAATACAGTCTGGCTGTCTACCCAGGAGGAAGAGCAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: WPMLAPMATSHCRGS*EIQSGCLPRRKSSQ Trigger: CTGGCTGCTCTTCCTCCTGGGTAGACAGCCAGACTGTATTTCCCAGCTGCCCCTGCAGTGAGATGTGGCCATCGGAGCCAGCATTGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000432583.2 ENST00000446648.6 |
||
| CDS CCA 90 bp | GGAGGCAGCATGCGTCACTCCCATGCAGAGTCCATTGGCCAATGCTaGCTCCGATGGCCACATCTCACTGCAGGGGCAGCTGGGAAATAC | + |
|
Preference number: 5 (lower is better) Translates to: GGSMRHSHAESIGQC*LRWPHLTAGAAGKY Trigger: GTATTTCCCAGCTGCCCCTGCAGTGAGATGTGGCCATCGGAGCCAGCATTGGCCAATGGACTCTGCATGGGAGTGACGCATGCTGCCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000432583.2 ENST00000446648.6 |
||
| CDS CCA 90 bp | TCCGATGGCCACATCTCACTGCAGGGGCAGCTGGGAAATACAGTCTaGCTGTCTACCCAGGAGGAAGAGCAGCCAGTTTCTGCTGCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: SDGHISLQGQLGNTV*LSTQEEEQPVSAAD Trigger: ATCAGCAGCAGAAACTGGCTGCTCTTCCTCCTGGGTAGACAGCCAGACTGTATTTCCCAGCTGCCCCTGCAGTGAGATGTGGCCATCGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000432583.2 ENST00000446648.6 |
||
| CDS TCA 90 bp | AACACAATGGAAGTTTATTTCTCACTAAGGGAACATCCAAATCCATaGTACTTTAAGTCAGGGACCCAGGTTCCTCCCATCTATGGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: NTMEVYFSLREHPNP*YFKSGTQVPPIYGS Trigger: AGAACCATAGATGGGAGGAACCTGGGTCCCTGACTTAAAGTATCATGGATTTGGATGTTCCCTTAGTGAGAAATAAACTTCCATTGTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000432583.2 ENST00000446648.6 |
||
| CDS CCA 72 bp | GCTCCTTGGAAGTGGGAAGAGCAGGCGGAGGACACGTaGGAGGTTTTAGGGACAAGCCTGGAGGCAGCATGC | + |
|
Preference number: 6 (lower is better) Translates to: APWKWEEQAEDT*EVLGTSLEAAC Trigger: GCATGCTGCCTCCAGGCTTGTCCCTAAAACCTCCCACGTGTCCTCCGCCTGCTCTTCCCACTTCCAAGGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000432583.2 ENST00000446648.6 |
||
| CDS CAA 72 bp | CTGGAGGCAGCATGCGTCACTCCCATGCAGAGTCCATaGGCCAATGCTGGCTCCGATGGCCACATCTCACTG | + |
|
Preference number: 6 (lower is better) Translates to: LEAACVTPMQSP*ANAGSDGHISL Trigger: CAGTGAGATGTGGCCATCGGAGCCAGCATTGGCCAATGGACTCTGCATGGGAGTGACGCATGCTGCCTCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000432583.2 ENST00000446648.6 |
||
| CDS CCA 72 bp | TCACTAATCTGGGTCTTCCACAATTGCCGTGCTCCTTaGAAGTGGGAAGAGCAGGCGGAGGACACGTGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: SLIWVFHNCRAP*KWEEQAEDTWE Trigger: CTCCCACGTGTCCTCCGCCTGCTCTTCCCACTTCCAAGGAGCACGGCAATTGTGGAAGACCCAGATTAGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000432583.2 ENST00000446648.6 |
||
| CDS GCA 72 bp | TCTGCCATCACTAATCTGGGTCTTCCACAATTGCCGTaGTCCTTGGAAGTGGGAAGAGCAGGCGGAGGACAC | + |
|
Preference number: 6 (lower is better) Translates to: SAITNLGLPQLP*SLEVGRAGGGH Trigger: GTGTCCTCCGCCTGCTCTTCCCACTTCCAAGGAGCACGGCAATTGTGGAAGACCCAGATTAGTGATGGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000432583.2 ENST00000446648.6 |
||
| CDS CAA 72 bp | ATCACTAATCTGGGTCTTCCACAATTGCCGTGCTCCTaGGAAGTGGGAAGAGCAGGCGGAGGACACGTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: ITNLGLPQLPCS*EVGRAGGGHVG Trigger: TCCCACGTGTCCTCCGCCTGCTCTTCCCACTTCCAAGGAGCACGGCAATTGTGGAAGACCCAGATTAGTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000432583.2 ENST00000446648.6 |
||
| CDS GCA 72 bp | ATGGTTCTGCCATCACTAATCTGGGTCTTCCACAATTaGCGTGCTCCTTGGAAGTGGGAAGAGCAGGCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: MVLPSLIWVFHN*RAPWKWEEQAE Trigger: CTCCGCCTGCTCTTCCCACTTCCAAGGAGCACGGCAATTGTGGAAGACCCAGATTAGTGATGGCAGAACCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000432583.2 ENST00000446648.6 |
||
| CDS CCA 72 bp | AGGTTCCTCCCATCTATGGTTCTGCCATCACTAATCTaGGTCTTCCACAATTGCCGTGCTCCTTGGAAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: RFLPSMVLPSLI*VFHNCRAPWKW Trigger: CCACTTCCAAGGAGCACGGCAATTGTGGAAGACCCAGATTAGTGATGGCAGAACCATAGATGGGAGGAACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000432583.2 ENST00000446648.6 |
||
| CDS TCA 72 bp | GAAGTTTATTTCTCACTAAGGGAACATCCAAATCCATaGTACTTTAAGTCAGGGACCCAGGTTCCTCCCATC | + |
|
Preference number: 6 (lower is better) Translates to: EVYFSLREHPNP*YFKSGTQVPPI Trigger: GATGGGAGGAACCTGGGTCCCTGACTTAAAGTATCATGGATTTGGATGTTCCCTTAGTGAGAAATAAACTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000432583.2 ENST00000446648.6 |
||