Pregenerated sensors for FAM138A (Homo sapiens)
Ensembl gene IDs: ENSG00000237613Ensembl transcript IDs: ENST00000417324.1
Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AATTGCCGTGCTCCTTGGAGGTGGGAAGAGCAGGCGGAGGACACGTaGGAGGTTTTAGGGACAAGCCTGGAGGCAGCATGCGTCACTCCC | + |
|
Preference number: 5 (lower is better) Translates to: NCRAPWRWEEQAEDT*EVLGTSLEAACVTP Trigger: GGGAGTGACGCATGCTGCCTCCAGGCTTGTCCCTAAAACCTCCCACGTGTCCTCCGCCTGCTCTTCCCACCTCCAAGGAGCACGGCAATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417324.1 |
||
| CDS CCA 90 bp | GTTCTGCCATCACTAATCTGGGTCTTCCACAATTGCCGTGCTCCTTaGAGGTGGGAAGAGCAGGCGGAGGACACGTGGGAGGTTTTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: VLPSLIWVFHNCRAP*RWEEQAEDTWEVLG Trigger: CCCTAAAACCTCCCACGTGTCCTCCGCCTGCTCTTCCCACCTCCAAGGAGCACGGCAATTGTGGAAGACCCAGATTAGTGATGGCAGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417324.1 |
||
| CDS CCA 72 bp | CTGGCTCCGATGGCCACATCTCACTGCAGGGGCAGCTaGGAAATACAGTCTGGCTGTCTACCCAGGAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LAPMATSHCRGS*EIQSGCLPRRK Trigger: CTTCCTCCTGGGTAGACAGCCAGACTGTATTTCCCAGCTGCCCCTGCAGTGAGATGTGGCCATCGGAGCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417324.1 |
||
| CDS CCA 72 bp | ATGCGTCACTCCCATGCAGAGTCCATTGGCCAATGCTaGCTCCGATGGCCACATCTCACTGCAGGGGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: MRHSHAESIGQC*LRWPHLTAGAA Trigger: AGCTGCCCCTGCAGTGAGATGTGGCCATCGGAGCCAGCATTGGCCAATGGACTCTGCATGGGAGTGACGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417324.1 |
||
| CDS CCA 72 bp | TCACTAATCTGGGTCTTCCACAATTGCCGTGCTCCTTaGAGGTGGGAAGAGCAGGCGGAGGACACGTGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: SLIWVFHNCRAP*RWEEQAEDTWE Trigger: CTCCCACGTGTCCTCCGCCTGCTCTTCCCACCTCCAAGGAGCACGGCAATTGTGGAAGACCCAGATTAGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417324.1 |
||
| CDS CCA 72 bp | ATCTGGGTCTTCCACAATTGCCGTGCTCCTTGGAGGTaGGAAGAGCAGGCGGAGGACACGTGGGAGGTTTTA | + |
|
Preference number: 6 (lower is better) Translates to: IWVFHNCRAPWR*EEQAEDTWEVL Trigger: TAAAACCTCCCACGTGTCCTCCGCCTGCTCTTCCCACCTCCAAGGAGCACGGCAATTGTGGAAGACCCAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417324.1 |
||
| CDS CCA 72 bp | CACATCTCACTGCAGGGGCAGCTGGGAAATACAGTCTaGCTGTCTACCCAGGAGGAAGAGCAGCCAGTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: HISLQGQLGNTV*LSTQEEEQPVS Trigger: AGAAACTGGCTGCTCTTCCTCCTGGGTAGACAGCCAGACTGTATTTCCCAGCTGCCCCTGCAGTGAGATGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417324.1 |
||
| CDS CCA 72 bp | AGGTTCCTCCCATCTATGGTTCTGCCATCACTAATCTaGGTCTTCCACAATTGCCGTGCTCCTTGGAGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: RFLPSMVLPSLI*VFHNCRAPWRW Trigger: CCACCTCCAAGGAGCACGGCAATTGTGGAAGACCCAGATTAGTGATGGCAGAACCATAGATGGGAGGAACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417324.1 |
||