RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM135B (Homo sapiens)

Ensembl gene IDs: ENSG00000147724

Ensembl transcript IDs: ENST00000160713.8, ENST00000276737.10, ENST00000395295.2, ENST00000395297.6, ENST00000467365.1, ENST00000482951.6, ENST00000517849.1, ENST00000520283.1, ENST00000520380.1, ENST00000520954.1, ENST00000523049.1

Found 1060 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCAGACCATTCCGGGGGTGGAAGTGCAGGCCAAGCGTTCGGCTGCTaGCCATCGGTGCCCCAGCCACATCCCTCAACTGCTGTTCACTGT +
Preference number: 1 (lower is better)
Translates to: ADHSGGGSAGQAFGC*PSVPQPHPSTAVHC
Trigger: ACAGTGAACAGCAGTTGAGGGATGTGGCTGGGGCACCGATGGTCAGCAGCCGAACGCTTGGCCTGCACTTCCACCCCCGGAATGGTCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR GCA 90 bp GATCACCGGCAGGGTGTTCCAATCGCCGTCGATGTCCAGGCACTCTaGAGGCAGCGGGGGCATGCTAGTGAGGTACTCCGAGTTCCGGAT +
Preference number: 1 (lower is better)
Translates to: DHRQGVPIAVDVQAL*RQRGHASEVLRVPD
Trigger: ATCCGGAACTCGGAGTACCTCACTAGCATGCCCCCGCTGCCTGCAGAGTGCCTGGACATCGACGGCGATTGGAACACCCTGCCGGTGATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR CCA 90 bp GGAGGGCATGTCTTCGAACAAACGGGTGCAAGACTTCCCGATCACTaGGCAACTCCAGAGCCCTGCTTCGGGCCTCTGACCAGGCGACGG +
Preference number: 1 (lower is better)
Translates to: GGHVFEQTGARLPDH*ATPEPCFGPLTRRR
Trigger: CCGTCGCCTGGTCAGAGGCCCGAAGCAGGGCTCTGGAGTTGCCCAGTGATCGGGAAGTCTTGCACCCGTTTGTTCGAAGACATGCCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR GCA 90 bp CAAACGGGTGCAAGACTTCCCGATCACTGGGCAACTCCAGAGCCCTaGTTCGGGCCTCTGACCAGGCGACGGAGCTTGGCTCACTCTCAA +
Preference number: 1 (lower is better)
Translates to: QTGARLPDHWATPEP*FGPLTRRRSLAHSQ
Trigger: TTGAGAGTGAGCCAAGCTCCGTCGCCTGGTCAGAGGCCCGAAGCAGGGCTCTGGAGTTGCCCAGTGATCGGGAAGTCTTGCACCCGTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR CCA 90 bp GCACAGCGATGTGAGCGGCTCGGCCGATCAGGGTGTTGGCAGTGTTaGGCAGGGCGTGGAACACGTTGTGTCGGATTAAAGTGCAGTCCT +
Preference number: 1 (lower is better)
Translates to: AQRCERLGRSGCWQC*AGRGTRCVGLKCSP
Trigger: AGGACTGCACTTTAATCCGACACAACGTGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCGAGCCGCTCACATCGCTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
3UTR CCA 90 bp CTGAATCCAGCACAGCGATGTGAGCGGCTCGGCCGATCAGGGTGTTaGCAGTGTTGGGCAGGGCGTGGAACACGTTGTGTCGGATTAAAG +
Preference number: 1 (lower is better)
Translates to: LNPAQRCERLGRSGC*QCWAGRGTRCVGLK
Trigger: CTTTAATCCGACACAACGTGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCGAGCCGCTCACATCGCTGTGCTGGATTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
3UTR TCA 90 bp AAGAAAAACTTCTCCAGGAAGAGTTCTGAATCCAGCACAGCGATGTaGGCGGCTCGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCG +
Preference number: 1 (lower is better)
Translates to: KKNFSRKSSESSTAM*AARPIRVLAVLGRA
Trigger: CGCCCTGCCCAACACTGCCAACACCCTGATCGGCCGAGCCGCTCACATCGCTGTGCTGGATTCAGAACTCTTCCTGGAGAAGTTTTTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
3UTR GCA 90 bp GTAAGCGTGGAGGAGCAACAGGCACAGGTCTCGGTGCCACTTGTGTaGGTGCTGCATGCAGTTCTCAGAGGTGATGTAGAAGCTTCCCTC +
Preference number: 1 (lower is better)
Translates to: VSVEEQQAQVSVPLV*VLHAVLRGDVEASL
Trigger: GAGGGAAGCTTCTACATCACCTCTGAGAACTGCATGCAGCACGCACACAAGTGGCACCGAGACCTGTGCCTGTTGCTCCTCCACGCTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR CCA 90 bp TGCAGAGTGACTGTGTCCAGGAACTGGGTCCACAGAGTCATCATGTaGGACGTGAGCCAGGCCAGATCCTTGCTTATCTGCTCAGCGATC +
Preference number: 1 (lower is better)
Translates to: CRVTVSRNWVHRVIM*DVSQARSLLICSAI
Trigger: GATCGCTGAGCAGATAAGCAAGGATCTGGCCTGGCTCACGTCCCACATGATGACTCTGTGGACCCAGTTCCTGGACACAGTCACTCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR GCA 90 bp GTTCACAACCTCCACAGCCTTCAGGCTGTCCAGAGTAAAGGTCTCTaGAGAAGTCAGATGGGACCCCATGATGGAAGTGCCTGCCTTCAG +
Preference number: 1 (lower is better)
Translates to: VHNLHSLQAVQSKGL*RSQMGPHDGSACLQ
Trigger: CTGAAGGCAGGCACTTCCATCATGGGGTCCCATCTGACTTCTGCAGAGACCTTTACTCTGGACAGCCTGAAGGCTGTGGAGGTTGTGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR CCA 90 bp TGCTTGGTGTCCGCATCTTCAGCAGCCTCCTCTGGGCTACTGATGTaGGGAGCAGATACAGACTTGGTTAACTTAGTGAGTGCCACCTCC +
Preference number: 1 (lower is better)
Translates to: CLVSASSAASSGLLM*GADTDLVNLVSATS
Trigger: GGAGGTGGCACTCACTAAGTTAACCAAGTCTGTATCTGCTCCCCACATCAGTAGCCCAGAGGAGGCTGCTGAAGATGCGGACACCAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR GCA 90 bp TGGCTCTTGCTGTGCATATCTGAAGGTTCAGCAAAACCTCCATCTTaGTGCTTGGTGTCCGCATCTTCAGCAGCCTCCTCTGGGCTACTG +
Preference number: 1 (lower is better)
Translates to: WLLLCISEGSAKPPS*CLVSASSAASSGLL
Trigger: CAGTAGCCCAGAGGAGGCTGCTGAAGATGCGGACACCAAGCAGCAAGATGGAGGTTTTGCTGAACCTTCAGATATGCACAGCAAGAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR CCA 90 bp TACGTCAATGTAGGTCAGCACTGGGGCCTGTCCATCCTCTGGACCTaGACTCCTTCTAGAAGTATCCACATCTGCCACTGGATATGTCCC +
Preference number: 1 (lower is better)
Translates to: YVNVGQHWGLSILWT*TPSRSIHICHWICP
Trigger: GGGACATATCCAGTGGCAGATGTGGATACTTCTAGAAGGAGTCCAGGTCCAGAGGATGGACAGGCCCCAGTGCTGACCTACATTGACGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR TCA 90 bp GTTCCACCCGAGCCTCCGTCCCCCAATGCTGTTGAAGCTTCATTCTaGAATGGTGAGGTCTGTAAAAGCAGGTCTCAGCTAAAGCTCTCC +
Preference number: 1 (lower is better)
Translates to: VPPEPPSPNAVEASF*NGEVCKSRSQLKLS
Trigger: GGAGAGCTTTAGCTGAGACCTGCTTTTACAGACCTCACCATTTCAGAATGAAGCTTCAACAGCATTGGGGGACGGAGGCTCGGGTGGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395297.6
ENST00000482951.6
3UTR TCA 90 bp AGGGGATGGTCTGCTCCAGCATCTGTTCCAGAGTCACCACAAAGTTaGGAGCAAGATCCTGGGGAACCTTGGCTCTTGCTGTGCATATCT +
Preference number: 1 (lower is better)
Translates to: RGWSAPASVPESPQS*EQDPGEPWLLLCIS
Trigger: AGATATGCACAGCAAGAGCCAAGGTTCCCCAGGATCTTGCTCTCAACTTTGTGGTGACTCTGGAACAGATGCTGGAGCAGACCATCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR TCA 90 bp TGCAAGGTGAACCGCTTTGGCTTTGCTGGCCTGTTGAGTTCCTGTTaGTGGCATCAGCAGCTGACGTACAGCTCAATTCAGGCACCTGAT +
Preference number: 1 (lower is better)
Translates to: CKVNRFGFAGLLSSC*WHQQLTYSSIQAPD
Trigger: ATCAGGTGCCTGAATTGAGCTGTACGTCAGCTGCTGATGCCATCAACAGGAACTCAACAGGCCAGCAAAGCCAAAGCGGTTCACCTTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR GCA 90 bp CTCTTGCTGTGCATATCTGAAGGTTCAGCAAAACCTCCATCTTGCTaGTTGGTGTCCGCATCTTCAGCAGCCTCCTCTGGGCTACTGATG +
Preference number: 1 (lower is better)
Translates to: LLLCISEGSAKPPSC*LVSASSAASSGLLM
Trigger: CATCAGTAGCCCAGAGGAGGCTGCTGAAGATGCGGACACCAAGCAGCAAGATGGAGGTTTTGCTGAACCTTCAGATATGCACAGCAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR CCA 90 bp CAGGAAGACAGTGTCCTTGAGCATCAAACTGCTTCCCTTTCCCTTTaGGGATGTCTATGTATCCGGGGCCCTGCTGGTTGTCAGCATCTA +
Preference number: 1 (lower is better)
Translates to: QEDSVLEHQTASLSL*GCLCIRGPAGCQHL
Trigger: TAGATGCTGACAACCAGCAGGGCCCCGGATACATAGACATCCCCAAAGGGAAAGGGAAGCAGTTTGATGCTCAAGGACACTGTCTTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR CCA 90 bp ACAGCCTTCAGGCTGTCCAGAGTAAAGGTCTCTGCAGAAGTCAGATaGGACCCCATGATGGAAGTGCCTGCCTTCAGCTCTTGGTTTTTC +
Preference number: 1 (lower is better)
Translates to: TAFRLSRVKVSAEVR*DPMMEVPAFSSWFF
Trigger: GAAAAACCAAGAGCTGAAGGCAGGCACTTCCATCATGGGGTCCCATCTGACTTCTGCAGAGACCTTTACTCTGGACAGCCTGAAGGCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR TCA 90 bp TTGATGACCCCGGATAGCACTGAGAGTTCCTCCTGCTCTTCTGTGTaGGAGTCCTTTAGGGAAGACCTAATATCTAAGGGCTCCCTCAGG +
Preference number: 1 (lower is better)
Translates to: LMTPDSTESSSCSSV*ESFREDLISKGSLR
Trigger: CCTGAGGGAGCCCTTAGATATTAGGTCTTCCCTAAAGGACTCTCACACAGAAGAGCAGGAGGAACTCTCAGTGCTATCCGGGGTCATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR TCA 90 bp TTGAGAGCAAGATCCTGGGGAACCTTGGCTCTTGCTGTGCATATCTaGAGGTTCAGCAAAACCTCCATCTTGCTGCTTGGTGTCCGCATC +
Preference number: 1 (lower is better)
Translates to: LRARSWGTLALAVHI*RFSKTSILLLGVRI
Trigger: GATGCGGACACCAAGCAGCAAGATGGAGGTTTTGCTGAACCTTCAGATATGCACAGCAAGAGCCAAGGTTCCCCAGGATCTTGCTCTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR TCA 90 bp GAGAGACCCTCAACCTCTGAGATGCCACTGTTGGAAAGAGCTTGCTaGCCCACATTCAAGTCTTTAGGCATGCCCTTTGGGGTTTCCTCA +
Preference number: 1 (lower is better)
Translates to: ERPSTSEMPLLERAC*PTFKSLGMPFGVSS
Trigger: TGAGGAAACCCCAAAGGGCATGCCTAAAGACTTGAATGTGGGTCAGCAAGCTCTTTCCAACAGTGGCATCTCAGAGGTTGAGGGTCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR GCA 90 bp CTGTCCATCCTCTGGACCTGGACTCCTTCTAGAAGTATCCACATCTaGCACTGGATATGTCCCAGCATCAGATGTTTGGCCAGTCCAACA +
Preference number: 1 (lower is better)
Translates to: LSILWTWTPSRSIHI*HWICPSIRCLASPT
Trigger: TGTTGGACTGGCCAAACATCTGATGCTGGGACATATCCAGTGGCAGATGTGGATACTTCTAGAAGGAGTCCAGGTCCAGAGGATGGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR CCA 90 bp CAGGGCCCATCATTTGGCCAGAAAGGAGAAGCTGCTACCAACTTATaGTTCTGTACTGAGCATGGGCACTTGCCTAGGTCAGGAAACACA +
Preference number: 1 (lower is better)
Translates to: QGPSFGQKGEAATNL*FCTEHGHLPRSGNT
Trigger: TGTGTTTCCTGACCTAGGCAAGTGCCCATGCTCAGTACAGAACCATAAGTTGGTAGCAGCTTCTCCTTTCTGGCCAAATGATGGGCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
3UTR CCA 90 bp AAACTTGTGTTACTTTCTGTGTGTCCACCCTCTAGGGAGTTCCGGTaGAGGGCATGTCTTCGAACAAACGGGTGCAAGACTTCCCGATCA +
Preference number: 1 (lower is better)
Translates to: KLVLLSVCPPSREFR*RACLRTNGCKTSRS
Trigger: TGATCGGGAAGTCTTGCACCCGTTTGTTCGAAGACATGCCCTCCACCGGAACTCCCTAGAGGGTGGACACACAGAAAGTAACACAAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR TCA 90 bp ACCACAGCATCATTTATGGGTACCTCTTCATTCCGGTATAAGATCTaGAAGACCCGGCTGTGCACGGTGCTGTCATGGACACAGGCTGAA +
Preference number: 1 (lower is better)
Translates to: TTASFMGTSSFRYKI*KTRLCTVLSWTQAE
Trigger: TTCAGCCTGTGTCCATGACAGCACCGTGCACAGCCGGGTCTTTCAGATCTTATACCGGAATGAAGAGGTACCCATAAATGATGCTGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR TCA 90 bp ACAGCTCAATTCAGGCACCTGATGTTGAGAGAGACCCTCAACCTCTaGGATGCCACTGTTGGAAAGAGCTTGCTGACCCACATTCAAGTC +
Preference number: 1 (lower is better)
Translates to: TAQFRHLMLRETLNL*DATVGKSLLTHIQV
Trigger: GACTTGAATGTGGGTCAGCAAGCTCTTTCCAACAGTGGCATCTCAGAGGTTGAGGGTCTCTCTCAACATCAGGTGCCTGAATTGAGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR GCA 90 bp AGAGTCATCATGTGGGACGTGAGCCAGGCCAGATCCTTGCTTATCTaGTCAGCGATCTTCTCTGGATTGTTCAACATCTGTAGCTCTGAG +
Preference number: 1 (lower is better)
Translates to: RVIMWDVSQARSLLI*SAIFSGLFNICSSE
Trigger: CTCAGAGCTACAGATGTTGAACAATCCAGAGAAGATCGCTGAGCAGATAAGCAAGGATCTGGCCTGGCTCACGTCCCACATGATGACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR GCA 90 bp AACCTGGGAATGAACGGAATGGGTCACAGTGGGGCACACAGTGCCTaGTTTATGTTTAGCCTCCGGGAAGGCATTCACTCCTCTATTAAA +
Preference number: 1 (lower is better)
Translates to: NLGMNGMGHSGAHSA*FMFSLREGIHSSIK
Trigger: TTTAATAGAGGAGTGAATGCCTTCCCGGAGGCTAAACATAAAGCAGGCACTGTGTGCCCCACTGTGACCCATTCCGTTCATTCCCAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR CCA 90 bp AGATTTTACGTCAATGTAGGTCAGCACTGGGGCCTGTCCATCCTCTaGACCTGGACTCCTTCTAGAAGTATCCACATCTGCCACTGGATA +
Preference number: 1 (lower is better)
Translates to: RFYVNVGQHWGLSIL*TWTPSRSIHICHWI
Trigger: TATCCAGTGGCAGATGTGGATACTTCTAGAAGGAGTCCAGGTCCAGAGGATGGACAGGCCCCAGTGCTGACCTACATTGACGTAAAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR CCA 90 bp GGAGGGGTTCTTATTGCTAGATTTTACGTCAATGTAGGTCAGCACTaGGGCCTGTCCATCCTCTGGACCTGGACTCCTTCTAGAAGTATC +
Preference number: 1 (lower is better)
Translates to: GGVLIARFYVNVGQH*GLSILWTWTPSRSI
Trigger: GATACTTCTAGAAGGAGTCCAGGTCCAGAGGATGGACAGGCCCCAGTGCTGACCTACATTGACGTAAAATCTAGCAATAAGAACCCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR CCA 90 bp GGAAAGAGCTTGCTGACCCACATTCAAGTCTTTAGGCATGCCCTTTaGGGTTTCCTCAAGTGCTCTATGAAGAGATCTGGTCCTGGGGTT +
Preference number: 1 (lower is better)
Translates to: GKSLLTHIQVFRHAL*GFLKCSMKRSGPGV
Trigger: AACCCCAGGACCAGATCTCTTCATAGAGCACTTGAGGAAACCCCAAAGGGCATGCCTAAAGACTTGAATGTGGGTCAGCAAGCTCTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR CCA 90 bp AATGCTGTGTCATCCATAATGCAAGGTGAACCGCTTTGGCTTTGCTaGCCTGTTGAGTTCCTGTTGATGGCATCAGCAGCTGACGTACAG +
Preference number: 1 (lower is better)
Translates to: NAVSSIMQGEPLWLC*PVEFLLMASAADVQ
Trigger: CTGTACGTCAGCTGCTGATGCCATCAACAGGAACTCAACAGGCCAGCAAAGCCAAAGCGGTTCACCTTGCATTATGGATGACACAGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR TCA 90 bp AGGTCTGCACTGTTCCCATCCAGGCCATGGACACAGACAACCAGGTaGATTCCATCTTCCAAATTTTCTTCCTCTTCCTCTGGTGGGAAA +
Preference number: 1 (lower is better)
Translates to: RSALFPSRPWTQTTR*IPSSKFSSSSSGGK
Trigger: TTTCCCACCAGAGGAAGAGGAAGAAAATTTGGAAGATGGAATTCACCTGGTTGTCTGTGTCCATGGCCTGGATGGGAACAGTGCAGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR GCA 90 bp AGTCACCACAAAGTTGAGAGCAAGATCCTGGGGAACCTTGGCTCTTaGTGTGCATATCTGAAGGTTCAGCAAAACCTCCATCTTGCTGCT +
Preference number: 1 (lower is better)
Translates to: SHHKVESKILGNLGS*CAYLKVQQNLHLAA
Trigger: AGCAGCAAGATGGAGGTTTTGCTGAACCTTCAGATATGCACAGCAAGAGCCAAGGTTCCCCAGGATCTTGCTCTCAACTTTGTGGTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR CCA 90 bp ATCCTCTGGACCTGGACTCCTTCTAGAAGTATCCACATCTGCCACTaGATATGTCCCAGCATCAGATGTTTGGCCAGTCCAACATTCATC +
Preference number: 1 (lower is better)
Translates to: ILWTWTPSRSIHICH*ICPSIRCLASPTFI
Trigger: GATGAATGTTGGACTGGCCAAACATCTGATGCTGGGACATATCCAGTGGCAGATGTGGATACTTCTAGAAGGAGTCCAGGTCCAGAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR CCA 90 bp TCATCCTCCTCAAAAGGTAAAGAGCTAATGGAGGTGAGAGAAGCCTaGATGCCGCTTGGCAAACTTGTGTTACTTTCTGTGTGTCCACCC +
Preference number: 1 (lower is better)
Translates to: SSSSKGKELMEVREA*MPLGKLVLLSVCPP
Trigger: GGGTGGACACACAGAAAGTAACACAAGTTTGCCAAGCGGCATCCAGGCTTCTCTCACCTCCATTAGCTCTTTACCTTTTGAGGAGGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR GCA 90 bp TTAAATGCTGTGTCATCCATAATGCAAGGTGAACCGCTTTGGCTTTaGTGGCCTGTTGAGTTCCTGTTGATGGCATCAGCAGCTGACGTA +
Preference number: 1 (lower is better)
Translates to: LNAVSSIMQGEPLWL*WPVEFLLMASAADV
Trigger: TACGTCAGCTGCTGATGCCATCAACAGGAACTCAACAGGCCAGCAAAGCCAAAGCGGTTCACCTTGCATTATGGATGACACAGCATTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR CCA 90 bp CCTCTATTAAATGCTGTGTCATCCATAATGCAAGGTGAACCGCTTTaGCTTTGCTGGCCTGTTGAGTTCCTGTTGATGGCATCAGCAGCT +
Preference number: 1 (lower is better)
Translates to: PLLNAVSSIMQGEPL*LCWPVEFLLMASAA
Trigger: AGCTGCTGATGCCATCAACAGGAACTCAACAGGCCAGCAAAGCCAAAGCGGTTCACCTTGCATTATGGATGACACAGCATTTAATAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR TCA 90 bp GGCTTAGTTGGTAGAGGAAACATTTGCGCAAATCAGCATTATCCCTaGAGGTCAGCTGCAGTAGAGACCCGGATTTCTTCAGTTTCTGCA +
Preference number: 1 (lower is better)
Translates to: GLVGRGNICANQHYP*RSAAVETRISSVSA
Trigger: TGCAGAAACTGAAGAAATCCGGGTCTCTACTGCAGCTGACCTTCAGGGATAATGCTGATTTGCGCAAATGTTTCCTCTACCAACTAAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
3UTR GCA 90 bp AGAACCCTGGTCCTAGATGCGTTTCCACACTTCAGAAGGGATTTTTaGAGAAGCAGGAGCTTTCATCTCCAAAAGATTAGGCTCCTGTCT +
Preference number: 1 (lower is better)
Translates to: RTLVLDAFPHFRRDF*RSRSFHLQKIRLLS
Trigger: AGACAGGAGCCTAATCTTTTGGAGATGAAAGCTCCTGCTTCTGCAAAAATCCCTTCTGAAGTGTGGAAACGCATCTAGGACCAGGGTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395297.6
3UTR TCA 90 bp ACTTCACTCAGTGCGTCTTCCATCCTTTCACCACCCAAGAGTAAATaGACTCGGAAGACCACAGCATCATTTATGGGTACCTCTTCATTC +
Preference number: 1 (lower is better)
Translates to: TSLSASSILSPPKSK*TRKTTASFMGTSSF
Trigger: GAATGAAGAGGTACCCATAAATGATGCTGTGGTCTTCCGAGTTCATTTACTCTTGGGTGGTGAAAGGATGGAAGACGCACTGAGTGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR CCA 90 bp CAAGCATTTAGAAAGGACTCACTGAGAAACCCTAAATCCATTGTGTaGAACTCTGCCTTTGCAAGACATTCAACTCTCCCTCAACGACCC +
Preference number: 1 (lower is better)
Translates to: QAFRKDSLRNPKSIV*NSAFARHSTLPQRP
Trigger: GGGTCGTTGAGGGAGAGTTGAATGTCTTGCAAAGGCAGAGTTCCACACAATGGATTTAGGGTTTCTCAGTGAGTCCTTTCTAAATGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
3UTR TCA 90 bp TCAGAGGGGGTGAGTTTCAAGCTTAGCAGCACCATCTTCCCCTCTTaGTCTATTCCCTTTCCTAGAGTACTTAATTCATGGAGAGTTGTT +
Preference number: 1 (lower is better)
Translates to: SEGVSFKLSSTIFPS*SIPFPRVLNSWRVV
Trigger: AACAACTCTCCATGAATTAAGTACTCTAGGAAAGGGAATAGATCAAGAGGGGAAGATGGTGCTGCTAAGCTTGAAACTCACCCCCTCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR GCA 90 bp AACGACCCTCTCTTTCTTCAAAAGAATACCACATGTCTACACTCCTaGAAAGCTGCCCATCTGGACTCATTCCCATGGTCTGCTTTTATT +
Preference number: 1 (lower is better)
Translates to: NDPLFLQKNTTCLHS*KAAHLDSFPWSAFI
Trigger: AATAAAAGCAGACCATGGGAATGAGTCCAGATGGGCAGCTTTGCAGGAGTGTAGACATGTGGTATTCTTTTGAAGAAAGAGAGGGTCGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395297.6
3UTR CCA 90 bp CCTTTGAGTCACTTACCAATAACAGCTTATGTTGAGTCTTCAGTCTaGTTGTTCTCCTCCTATCTGATCTCACTTTTGTCCCTGTCGTCT +
Preference number: 1 (lower is better)
Translates to: PLSHLPITAYVESSV*LFSSYLISLLSLSS
Trigger: AGACGACAGGGACAAAAGTGAGATCAGATAGGAGGAGAACAACCAGACTGAAGACTCAACATAAGCTGTTATTGGTAAGTGACTCAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395297.6
3UTR CCA 90 bp GCACATGTCCATATGATTTTGTGTGGCCACATTCTCACCTGGCTCTaGACACCTTATAACTTCTTCATCAGAATCCATTTGGGATGGTTT +
Preference number: 1 (lower is better)
Translates to: AHVHMILCGHILTWL*TPYNFFIRIHLGWF
Trigger: AAACCATCCCAAATGGATTCTGATGAAGAAGTTATAAGGTGTCCAGAGCCAGGTGAGAATGTGGCCACACAAAATCATATGGACATGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR CCA 90 bp TTCAGAGCACATGTCCATATGATTTTGTGTGGCCACATTCTCACCTaGCTCTGGACACCTTATAACTTCTTCATCAGAATCCATTTGGGA +
Preference number: 1 (lower is better)
Translates to: FRAHVHMILCGHILT*LWTPYNFFIRIHLG
Trigger: TCCCAAATGGATTCTGATGAAGAAGTTATAAGGTGTCCAGAGCCAGGTGAGAATGTGGCCACACAAAATCATATGGACATGTGCTCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR CCA 90 bp CTTAATTCATGGAGAGTTGTTTTGTCTGAAGAGATGGCATTTTGGTaGCTTCCACCTACTACCACTTTGCTTAGCCCAGTCCTGTCTAAT +
Preference number: 1 (lower is better)
Translates to: LNSWRVVLSEEMAFW*LPPTTTLLSPVLSN
Trigger: ATTAGACAGGACTGGGCTAAGCAAAGTGGTAGTAGGTGGAAGCCACCAAAATGCCATCTCTTCAGACAAAACAACTCTCCATGAATTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR CCA 90 bp GTTCTCACTATGTCCAGACAGCATATTGAAGTTAAAAATGGCATCTaGTTATTGGAGAAGATGATGATCATCAGATTCATCCCGGCTCCA +
Preference number: 1 (lower is better)
Translates to: VLTMSRQHIEVKNGI*LLEKMMIIRFIPAP
Trigger: TGGAGCCGGGATGAATCTGATGATCATCATCTTCTCCAATAACCAGATGCCATTTTTAACTTCAATATGCTGTCTGGACATAGTGAGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
3UTR CCA 90 bp TCACCTGGCTCTGGACACCTTATAACTTCTTCATCAGAATCCATTTaGGATGGTTTTATGGTAGACAAGACAAGGTCTTCCCTAAAAGAT +
Preference number: 1 (lower is better)
Translates to: SPGSGHLITSSSESI*DGFMVDKTRSSLKD
Trigger: ATCTTTTAGGGAAGACCTTGTCTTGTCTACCATAAAACCATCCCAAATGGATTCTGATGAAGAAGTTATAAGGTGTCCAGAGCCAGGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR GCA 90 bp CTTATTTACAATATAGAGATGTACTTTCTACACAATTATAATAGATaGTCAGAGGCCAGAGAGGGTTTACAAAGACAGCAGAGCACCCCT +
Preference number: 1 (lower is better)
Translates to: LIYNIEMYFLHNYNR*SEAREGLQRQQSTP
Trigger: AGGGGTGCTCTGCTGTCTTTGTAAACCCTCTCTGGCCTCTGAGCATCTATTATAATTGTGTAGAAAGTACATCTCTATATTGTAAATAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395297.6
3UTR-3UTR TCA 90 bp AGCGGCTCGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACACGTTTACAGGGTTCCCAGGTaGGGCCCAGAGAGTGACAGG +
Preference number: 2 (lower is better)
Translates to: SGSADQGVGSVGQGVEHVYRVPR*GPESDR
Trigger: CCTGTCACTCTCTGGGCCTCACCTGGGAACCCTGTA...AACGTGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCGAGCCGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
3UTR-3UTR TCA 90 bp CTGCTTCCCTTTCCCTTTGGGGATGTCTATGTATCCGGGGCCCTGCTGGTTGTCCCTGCTTCGGGCCTCTaGCCAGGCGACGGAGCTTGG +
Preference number: 2 (lower is better)
Translates to: LLPFPFGDVYVSGALLVVPASGL*PGDGAW
Trigger: CCAAGCTCCGTCGCCTGGTCAGAGGCCCGAAGCAGG...GACAACCAGCAGGGCCCCGGATACATAGACATCCCCAAAGGGAAAGGGAAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR GCA 90 bp AAGCGTGGAGGAGCAACAGGCACAGGTCTCGGTGCCACTTGTGTGCGTGCTGCAGCTGCTGACCATCGGTaGCCCAGCCACATCCCTCAA +
Preference number: 2 (lower is better)
Translates to: KRGGATGTGLGATCVRAAAADHR*PSHIPQ
Trigger: TTGAGGGATGTGGCTGGGGCACCGATGGTCAGCAGC...TGCAGCACGCACACAAGTGGCACCGAGACCTGTGCCTGTTGCTCCTCCACGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR CAA 90 bp CGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACACGTaGTGTCGGATTAAAGTGCAGTCCTTGGCTTCAACCAGAGGGCCC +
Preference number: 2 (lower is better)
Translates to: RPIRVLAVLGRAWNT*CRIKVQSLASTRGP
Trigger: GGGCCCTCTGGTTGAAGCCAAGGACTGCACTTTAATCCGACACAACGTGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
3UTR-3UTR TCA 90 bp CGGCTCGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACACGTTGTACGTGTGGAGTTTGTTaGGGTAATACCGGAACCGGG +
Preference number: 2 (lower is better)
Translates to: RLGRSGCWQCWAGRGTRCTCGVC*GNTGTG
Trigger: CCCGGTTCCGGTATTACCTCAACAAACTCCACACGT...ACAACGTGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCGAGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
3UTR-3UTR TCA 90 bp GTGAGCGGCTCGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACACCCACCCAAGAGTAAATaGACTCGGAAGACCACAGCA +
Preference number: 2 (lower is better)
Translates to: VSGSADQGVGSVGQGVEHPPKSK*TRKTTA
Trigger: TGCTGTGGTCTTCCGAGTTCATTTACTCTTGGGTGG...GTGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCGAGCCGCTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR GCA 90 bp TTGTCCGGTGTCTGGGCCACCTTTACCAAGCCAGGAGCCTCTTCCTGGACGAGTCTGCTGCTCTCTGTCTaGCCAGCGATGGAGGCACTC +
Preference number: 2 (lower is better)
Translates to: LSGVWATFTKPGASSWTSLLLSV*PAMEAL
Trigger: GAGTGCCTCCATCGCTGGGCAGACAGAGAGCAGCAG...ACTCGTCCAGGAAGAGGCTCCTGGCTTGGTAAAGGTGGCCCAGACACCGGACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR GCA 90 bp CACTCTGCAGGCAGCGGGGGCATGCTAGTGAGGTACTCCGAGTTCCGGATATCCAGGCTGAATGCAGGCTaGTGCTCTCTGTCTGCCCAG +
Preference number: 2 (lower is better)
Translates to: HSAGSGGMLVRYSEFRISRLNAG*CSLSAQ
Trigger: CTGGGCAGACAGAGAGCAGCAGCCTGCATTCAGCCT...GGATATCCGGAACTCGGAGTACCTCACTAGCATGCCCCCGCTGCCTGCAGAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR CCA 90 bp CTGCTTCCCTTTCCCTTTGGGGATGTCTATGTATCCGGGGCCCTGCTGGTTGTCCTCCAGCTCCGTGTGTaGCAGCTCTGGGATGTCCCG +
Preference number: 2 (lower is better)
Translates to: LLPFPFGDVYVSGALLVVLQLRV*QLWDVP
Trigger: CGGGACATCCCAGAGCTGCCACACACGGAGCTGGAG...GACAACCAGCAGGGCCCCGGATACATAGACATCCCCAAAGGGAAAGGGAAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR GCA 90 bp GAGGGCATGTCTTCGAACAAACGGGTGCAAGACTTCCCGATCACTGGGCAACTCTTCCGGGGGTGGAAGTaGAGGCCAAGCGTTCGGCTG +
Preference number: 2 (lower is better)
Translates to: EGMSSNKRVQDFPITGQLFRGWK*RPSVRL
Trigger: CAGCCGAACGCTTGGCCTGCACTTCCACCCCCGGAA...GAGTTGCCCAGTGATCGGGAAGTCTTGCACCCGTTTGTTCGAAGACATGCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR TCA 90 bp CCTGTTGAGTTCCTGTTGATGGCATCAGCAGCTGACGTACAGCTCAATTCAGGCTCCAGCACAGCGATGTaGGCGGCTCGGCCGATCAGG +
Preference number: 2 (lower is better)
Translates to: PVEFLLMASAADVQLNSGSSTAM*AARPIR
Trigger: CCTGATCGGCCGAGCCGCTCACATCGCTGTGCTGGA...GCCTGAATTGAGCTGTACGTCAGCTGCTGATGCCATCAACAGGAACTCAACAGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR CCA 90 bp TGTACTAACCAGGGTGCTGTTGTTGTACAGGGTTCCCAGGTGAGGCCCAGAGAGCTGTCTGCCCAGCGATaGAGGCACTCAGTCTGTGGG +
Preference number: 2 (lower is better)
Translates to: CTNQGAVVVQGSQVRPRELSAQR*RHSVCG
Trigger: CCCACAGACTGAGTGCCTCCATCGCTGGGCAGACAG...CTCTCTGGGCCTCACCTGGGAACCCTGTACAACAACAGCACCCTGGTTAGTACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR CCA 90 bp AGCGGCTCGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACACGTTCCAGGAGCCTCTTCCTaGACGAGTAAAACTGATCAA +
Preference number: 2 (lower is better)
Translates to: SGSADQGVGSVGQGVEHVPGASS*TSKTDQ
Trigger: TTGATCAGTTTTACTCGTCCAGGAAGAGGCTCCTGG...AACGTGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCGAGCCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR TCA 90 bp GCGGCTCGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACACGTTGCATTTCAATCCTGGCTaGATGAAATGGCACATAACG +
Preference number: 2 (lower is better)
Translates to: AARPIRVLAVLGRAWNTLHFNPG*MKWHIT
Trigger: CGTTATGTGCCATTTCATTCAGCCAGGATTGAAATG...CAACGTGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCGAGCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
3UTR-3UTR GCA 90 bp CTGCTTCCCTTTCCCTTTGGGGATGTCTATGTATCCGGGGCCCTGCTGGTTGTCGTGGTCACTTGGGAGTaGAGAGTGACTGTGTCCAGG +
Preference number: 2 (lower is better)
Translates to: LLPFPFGDVYVSGALLVVVVTWE*RVTVSR
Trigger: CCTGGACACAGTCACTCTGCACTCCCAAGTGACCAC...GACAACCAGCAGGGCCCCGGATACATAGACATCCCCAAAGGGAAAGGGAAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR CCA 90 bp CTGCTTCCCTTTCCCTTTGGGGATGTCTATGTATCCGGGGCCCTGCTGGTTGTCGAGGCACTCAGTCTGTaGGGGATCCTTGAAGACACC +
Preference number: 2 (lower is better)
Translates to: LLPFPFGDVYVSGALLVVEALSL*GILEDT
Trigger: GGTGTCTTCAAGGATCCCCCACAGACTGAGTGCCTC...GACAACCAGCAGGGCCCCGGATACATAGACATCCCCAAAGGGAAAGGGAAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR CCA 90 bp CTGCTTCCCTTTCCCTTTGGGGATGTCTATGTATCCGGGGCCCTGCTGGTTGTCCACAGAGTCATCATGTaGGACGTGAGCCAGGCCAGA +
Preference number: 2 (lower is better)
Translates to: LLPFPFGDVYVSGALLVVHRVIM*DVSQAR
Trigger: TCTGGCCTGGCTCACGTCCCACATGATGACTCTGTG...GACAACCAGCAGGGCCCCGGATACATAGACATCCCCAAAGGGAAAGGGAAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR GCA 90 bp ACCTTTACCAAGCCAGGAGCCTCTTCCTGGACGAGTAAAACTGATCAATGGCTGCCCGGCTGTGCACGGTaGTGTCATGGACACAGGCTG +
Preference number: 2 (lower is better)
Translates to: TFTKPGASSWTSKTDQWLPGCAR*CHGHRL
Trigger: CAGCCTGTGTCCATGACAGCACCGTGCACAGCCGGG...CAGCCATTGATCAGTTTTACTCGTCCAGGAAGAGGCTCCTGGCTTGGTAAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR CCA 90 bp TTGTGTCGGATTAAAGTGCAGTCCTTGGCTTCAACCAGAGGGCCCAGGAGGTTGAGACCATTCCGGGGGTaGAAGTGCAGGCCAAGCGTT +
Preference number: 2 (lower is better)
Translates to: LCRIKVQSLASTRGPRRLRPFRG*KCRPSV
Trigger: AACGCTTGGCCTGCACTTCCACCCCCGGAATGGTCT...CAACCTCCTGGGCCCTCTGGTTGAAGCCAAGGACTGCACTTTAATCCGACACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR TCA 90 bp GAGGGCATGTCTTCGAACAAACGGGTGCAAGACTTCCCGATCACTGGGCAACTCACGTGTGGAGTTTGTTaGGGTAATACCGGAACCGGG +
Preference number: 2 (lower is better)
Translates to: EGMSSNKRVQDFPITGQLTCGVC*GNTGTG
Trigger: CCCGGTTCCGGTATTACCTCAACAAACTCCACACGT...GAGTTGCCCAGTGATCGGGAAGTCTTGCACCCGTTTGTTCGAAGACATGCCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR TCA 90 bp TTGTGTCGGATTAAAGTGCAGTCCTTGGCTTCAACCAGAGGGCCCAGGAGGTTGGTGAGGCCCAGAGAGTaGCAGGAACGTGTGGAGTTT +
Preference number: 2 (lower is better)
Translates to: LCRIKVQSLASTRGPRRLVRPRE*QERVEF
Trigger: AAACTCCACACGTTCCTGTCACTCTCTGGGCCTCAC...CAACCTCCTGGGCCCTCTGGTTGAAGCCAAGGACTGCACTTTAATCCGACACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
3UTR-3UTR TCA 90 bp GCACCTGATGTTGAGAGAGACCCTCAACCTCTGAGATGCCACTGTTGGAAAGAGGTCATGGACACAGGCTaGATGCAGGCTGCTGCTCTC +
Preference number: 2 (lower is better)
Translates to: APDVERDPQPLRCHCWKEVMDTG*MQAAAL
Trigger: GAGAGCAGCAGCCTGCATTCAGCCTGTGTCCATGAC...CTCTTTCCAACAGTGGCATCTCAGAGGTTGAGGGTCTCTCTCAACATCAGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR GCA 90 bp CACTCTGCAGGCAGCGGGGGCATGCTAGTGAGGTACTCCGAGTTCCGGATATCCAGATCCTTGCTTATCTaGTCAGCGATCTTCTCTGGA +
Preference number: 2 (lower is better)
Translates to: HSAGSGGMLVRYSEFRISRSLLI*SAIFSG
Trigger: TCCAGAGAAGATCGCTGAGCAGATAAGCAAGGATCT...GGATATCCGGAACTCGGAGTACCTCACTAGCATGCCCCCGCTGCCTGCAGAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR CAA 90 bp TTGGGCAGGGCGTGGAACACGTTGTGTCGGATTAAAGTGCAGTCCTaGGCTTCAACCAGAGGGCCCAGGAGGTTGTTGATCATTTCTGCA +
Preference number: 2 (lower is better)
Translates to: LGRAWNTLCRIKVQS*ASTRGPRRLLIISA
Trigger: TGCAGAAATGATCAACAACCTCCTGGGCCCTCTGGTTGAAGCCAAGGACTGCACTTTAATCCGACACAACGTGTTCCACGCCCTGCCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
3UTR CAA 90 bp TCTCTGTCTGCCCAGCGATGGAGGCACTCAGTCTGTGGGGGATCCTaGAAGACACCTTCAAGGTCACTCGGATCTGGTAATACAATGAGC +
Preference number: 2 (lower is better)
Translates to: SLSAQRWRHSVCGGS*KTPSRSLGSGNTMS
Trigger: GCTCATTGTATTACCAGATCCGAGTGACCTTGAAGGTGTCTTCAAGGATCCCCCACAGACTGAGTGCCTCCATCGCTGGGCAGACAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR CAA 90 bp CAGGGGATGGTCTGCTCCAGCATCTGTTCCAGAGTCACCACAAAGTaGAGAGCAAGATCCTGGGGAACCTTGGCTCTTGCTGTGCATATC +
Preference number: 2 (lower is better)
Translates to: QGMVCSSICSRVTTK*RARSWGTLALAVHI
Trigger: GATATGCACAGCAAGAGCCAAGGTTCCCCAGGATCTTGCTCTCAACTTTGTGGTGACTCTGGAACAGATGCTGGAGCAGACCATCCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR TCA 90 bp TTGTGTCGGATTAAAGTGCAGTCCTTGGCTTCAACCAGAGGGCCCAGGAGGTTGTCTGTGGGGGATCCTTaGAGACACCTTCAAGGTCAC +
Preference number: 2 (lower is better)
Translates to: LCRIKVQSLASTRGPRRLSVGDP*RHLQGH
Trigger: GTGACCTTGAAGGTGTCTTCAAGGATCCCCCACAGA...CAACCTCCTGGGCCCTCTGGTTGAAGCCAAGGACTGCACTTTAATCCGACACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR GCA 90 bp AAAGTGCAGTCCTTGGCTTCAACCAGAGGGCCCAGGAGGTTGTTGATCATTTCTCTGAATGCAGGCTGCTaGTCTCTGTCTGCCCAGCGA +
Preference number: 2 (lower is better)
Translates to: KVQSLASTRGPRRLLIISLNAGC*SLSAQR
Trigger: TCGCTGGGCAGACAGAGAGCAGCAGCCTGCATTCAG...AGAAATGATCAACAACCTCCTGGGCCCTCTGGTTGAAGCCAAGGACTGCACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR GCA 90 bp TGGCTGAATGAAATGGCACATAACGGTCTTGGGGAGAAGCAACCAGCACGACGTTGGACACAGGCTGAATaGAGGCTGCTGCTCTCTGTC +
Preference number: 2 (lower is better)
Translates to: WLNEMAHNGLGEKQPARRWTQAE*RLLLSV
Trigger: GACAGAGAGCAGCAGCCTGCATTCAGCCTGTGTCCA...ACGTCGTGCTGGTTGCTTCTCCCCAAGACCGTTATGTGCCATTTCATTCAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR GCA 90 bp CTGCTTCCCTTTCCCTTTGGGGATGTCTATGTATCCGGGGCCCTGCTGGTTGTCAGAAGTATCCACATCTaGCACTGGATATGTCCCAGC +
Preference number: 2 (lower is better)
Translates to: LLPFPFGDVYVSGALLVVRSIHI*HWICPS
Trigger: GCTGGGACATATCCAGTGGCAGATGTGGATACTTCT...GACAACCAGCAGGGCCCCGGATACATAGACATCCCCAAAGGGAAAGGGAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR CCA 90 bp TGTGAGCGGCTCGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACATACACATTTCAATCCTaGCTGAATGAAATGGCACAT +
Preference number: 2 (lower is better)
Translates to: CERLGRSGCWQCWAGRGTYTFQS*LNEMAH
Trigger: ATGTGCCATTTCATTCAGCCAGGATTGAAATGTGTA...TGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCGAGCCGCTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
3UTR CAA 90 bp ACCTCTCATGTCAGGTTCCACCCGAGCCTCCGTCCCCCAATGCTGTaGAAGCTTCATTCTGAAATGGTGAGGTCTGTAAAAGCAGGTCTC +
Preference number: 2 (lower is better)
Translates to: TSHVRFHPSLRPPML*KLHSEMVRSVKAGL
Trigger: GAGACCTGCTTTTACAGACCTCACCATTTCAGAATGAAGCTTCAACAGCATTGGGGGACGGAGGCTCGGGTGGAACCTGACATGAGAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395297.6
ENST00000482951.6
3UTR CAA 90 bp TTGCTGTGCATATCTGAAGGTTCAGCAAAACCTCCATCTTGCTGCTaGGTGTCCGCATCTTCAGCAGCCTCCTCTGGGCTACTGATGTGG +
Preference number: 2 (lower is better)
Translates to: LLCISEGSAKPPSCC*VSASSAASSGLLMW
Trigger: CCACATCAGTAGCCCAGAGGAGGCTGCTGAAGATGCGGACACCAAGCAGCAAGATGGAGGTTTTGCTGAACCTTCAGATATGCACAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR TCA 90 bp GTGCAAGACACAGATAAGTTCACAACCTCCACAGCCTTCAGGCTGTCCAGAGTATCAGATGGGACCCCATaGTGGAAGTGCCTGCCTTCA +
Preference number: 2 (lower is better)
Translates to: VQDTDKFTTSTAFRLSRVSDGTP*WKCLPS
Trigger: TGAAGGCAGGCACTTCCATCATGGGGTCCCATCTGA...TACTCTGGACAGCCTGAAGGCTGTGGAGGTTGTGAACTTATCTGTGTCTTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR GCA 90 bp GCACCTGATGTTGAGAGAGACCCTCAACCTCTGAGATGCCACTGTTGGAAAGAGCACTTGTGTGCGTGCTaGATGCAGTTCTCAGAGGTG +
Preference number: 2 (lower is better)
Translates to: APDVERDPQPLRCHCWKEHLCAC*MQFSEV
Trigger: CACCTCTGAGAACTGCATGCAGCACGCACACAAGTG...CTCTTTCCAACAGTGGCATCTCAGAGGTTGAGGGTCTCTCTCAACATCAGGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR GCA 90 bp GATGATGTTGCCAAGAGAATGGCCAATGAAGCTAATTCGGGATATGGAGAGGTTGCAACTCCAGAGCCCTaGTTCGGGCCTCTGACCAGG +
Preference number: 2 (lower is better)
Translates to: DDVAKRMANEANSGYGEVATPEP*FGPLTR
Trigger: CCTGGTCAGAGGCCCGAAGCAGGGCTCTGGAGTTGC...AACCTCTCCATATCCCGAATTAGCTTCATTGGCCATTCTCTTGGCAACATCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR CCA 90 bp AGTATCCACATCTGCCACTGGATATGTCCCAGCATCAGATGTTTGGCCAGTCCAGTGTTGGGCAGGGCGTaGAACACGTTGTGTCGGATT +
Preference number: 2 (lower is better)
Translates to: SIHICHWICPSIRCLASPVLGRA*NTLCRI
Trigger: AATCCGACACAACGTGTTCCACGCCCTGCCCAACAC...TGGACTGGCCAAACATCTGATGCTGGGACATATCCAGTGGCAGATGTGGATACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR CCA 90 bp GCACCTGATGTTGAGAGAGACCCTCAACCTCTGAGATGCCACTGTTGGAAAGAGTTCTTGTCCGGTGTCTaGGCCACCTTTACCAAGCCA +
Preference number: 2 (lower is better)
Translates to: APDVERDPQPLRCHCWKEFLSGV*ATFTKP
Trigger: TGGCTTGGTAAAGGTGGCCCAGACACCGGACAAGAA...CTCTTTCCAACAGTGGCATCTCAGAGGTTGAGGGTCTCTCTCAACATCAGGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR CAA 90 bp GGAGAAGCTGCTACCAACTTATGGTTCTGTACTGAGCATGGGCACTaGCCTAGGTCAGGAAACACAATACCATGTGCTGCACGACTAGGG +
Preference number: 2 (lower is better)
Translates to: GEAATNLWFCTEHGH*PRSGNTIPCAARLG
Trigger: CCCTAGTCGTGCAGCACATGGTATTGTGTTTCCTGACCTAGGCAAGTGCCCATGCTCAGTACAGAACCATAAGTTGGTAGCAGCTTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
3UTR CAA 90 bp TGGGTCCACAGAGTCATCATGTGGGACGTGAGCCAGGCCAGATCCTaGCTTATCTGCTCAGCGATCTTCTCTGGATTGTTCAACATCTGT +
Preference number: 2 (lower is better)
Translates to: WVHRVIMWDVSQARS*LICSAIFSGLFNIC
Trigger: ACAGATGTTGAACAATCCAGAGAAGATCGCTGAGCAGATAAGCAAGGATCTGGCCTGGCTCACGTCCCACATGATGACTCTGTGGACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR TCA 90 bp CTTCAGCTCTTGGTTTTTCAAAACCTGGGAATGAACGGAATGGGTCACAGTGGGGTGAGGCCCAGAGAGTaGCAGGAACGTGTGGAGTTT +
Preference number: 2 (lower is better)
Translates to: LQLLVFQNLGMNGMGHSGVRPRE*QERVEF
Trigger: AAACTCCACACGTTCCTGTCACTCTCTGGGCCTCAC...CCCACTGTGACCCATTCCGTTCATTCCCAGGTTTTGAAAAACCAAGAGCTGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR TCA 90 bp CGGATTAAAGTGCAGTCCTTGGCTTCAACCAGAGGGCCCAGGAGGTTGTTGATCAATCAGCATTATCCCTaGAGGTCAGCTGCAGTAGAG +
Preference number: 2 (lower is better)
Translates to: RIKVQSLASTRGPRRLLINQHYP*RSAAVE
Trigger: CTCTACTGCAGCTGACCTTCAGGGATAATGCTGATT...GATCAACAACCTCCTGGGCCCTCTGGTTGAAGCCAAGGACTGCACTTTAATCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
3UTR-3UTR TCA 90 bp TATGTCCCAGCATCAGATGTTTGGCCAGTCCAACATTCATCTTCAGGCACACCTGGAAATAGTCGAACATaGCCGGGACCTGGTGGTGCA +
Preference number: 2 (lower is better)
Translates to: YVPASDVWPVQHSSSGTPGNSRT*PGPGGA
Trigger: TGCACCACCAGGTCCCGGTCATGTTCGACTATTTCC...AGGTGTGCCTGAAGATGAATGTTGGACTGGCCAAACATCTGATGCTGGGACATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR TCA 90 bp TCCTCATCCAACGTGCTGGAATGGGTAGAAACAACTCCAAAGGATCCCAAAGGCGTAGAAGCTTCCCTCTaGGGAAGTCGGCTTGCAGTA +
Preference number: 2 (lower is better)
Translates to: SSSNVLEWVETTPKDPKGVEASL*GSRLAV
Trigger: TACTGCAAGCCGACTTCCTCAGAGGGAAGCTTCTAC...GCCTTTGGGATCCTTTGGAGTTGTTTCTACCCATTCCAGCACGTTGGATGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR TCA 90 bp CCCATCCAGGCCATGGACACAGACAACCAGGTGAATTCCATCTTCCAAATTTTCCTCCTACTCTCATGCTaGGCATTGAAGGCCACCAGG +
Preference number: 2 (lower is better)
Translates to: PIQAMDTDNQVNSIFQIFLLLSC*ALKATR
Trigger: CCTGGTGGCCTTCAATGCTCAGCATGAGAGTAGGAG...GAAAATTTGGAAGATGGAATTCACCTGGTTGTCTGTGTCCATGGCCTGGATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR CCA 90 bp AAACATCCTCTCACTGACTTCCTCATCCAACGTGCTGGAATGGGTAGAAACAACAACATGACCGGGACCTaGTGGTGCAGACCATTCCGG +
Preference number: 2 (lower is better)
Translates to: KHPLTDFLIQRAGMGRNNNMTGT*WCRPFR
Trigger: CCGGAATGGTCTGCACCACCAGGTCCCGGTCATGTT...GTTGTTTCTACCCATTCCAGCACGTTGGATGAGGAAGTCAGTGAGAGGATGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR CCA 90 bp GATGATGTTGCCAAGAGAATGGCCAATGAAGCTAATTCGGGATATGGAGAGGTTGCCACCAGGGCAGCATaGACGGTCACCGAGATCACA +
Preference number: 2 (lower is better)
Translates to: DDVAKRMANEANSGYGEVATRAA*TVTEIT
Trigger: TGTGATCTCGGTGACCGTCCATGCTGCCCTGGTGGC...AACCTCTCCATATCCCGAATTAGCTTCATTGGCCATTCTCTTGGCAACATCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR CCA 90 bp GAGGGCATGTCTTCGAACAAACGGGTGCAAGACTTCCCGATCACTGGGCAACTCCCAGCATCAGATGTTTaGCCAGTCCAACATTCATCT +
Preference number: 2 (lower is better)
Translates to: EGMSSNKRVQDFPITGQLPASDV*PVQHSS
Trigger: AGATGAATGTTGGACTGGCCAAACATCTGATGCTGG...GAGTTGCCCAGTGATCGGGAAGTCTTGCACCCGTTTGTTCGAAGACATGCCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR CCA 90 bp AAACATCCTCTCACTGACTTCCTCATCCAACGTGCTGGAATGGGTAGAAACAACCGGAATGGGTCACAGTaGGGCACACAGTGCCTGCTT +
Preference number: 2 (lower is better)
Translates to: KHPLTDFLIQRAGMGRNNRNGSQ*GTQCLL
Trigger: AAGCAGGCACTGTGTGCCCCACTGTGACCCATTCCG...GTTGTTTCTACCCATTCCAGCACGTTGGATGAGGAAGTCAGTGAGAGGATGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR TCA 90 bp CTTCAGCTCTTGGTTTTTCAAAACCTGGGAATGAACGGAATGGGTCACAGTGGGGCTTTGCTGGCCTGTTaGGTTCCTGTTGATGGCATC +
Preference number: 2 (lower is better)
Translates to: LQLLVFQNLGMNGMGHSGALLAC*VPVDGI
Trigger: GATGCCATCAACAGGAACTCAACAGGCCAGCAAAGC...CCCACTGTGACCCATTCCGTTCATTCCCAGGTTTTGAAAAACCAAGAGCTGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR TCA 90 bp GATGATGTTGCCAAGAGAATGGCCAATGAAGCTAATTCGGGATATGGAGAGGTTCTCCTTGGGCACAGATaGGAAAGGGAGACAGGTGGC +
Preference number: 2 (lower is better)
Translates to: DDVAKRMANEANSGYGEVLLGHR*ERETGG
Trigger: GCCACCTGTCTCCCTTTCTCATCTGTGCCCAAGGAG...AACCTCTCCATATCCCGAATTAGCTTCATTGGCCATTCTCTTGGCAACATCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR GCA 90 bp ACTGGATATGTCCCAGCATCAGATGTTTGGCCAGTCCAACATTCATCTTCAGGCCTGAGGAAGTCGGCTTaGAGTACCCAGCTCCAAAGA +
Preference number: 2 (lower is better)
Translates to: TGYVPASDVWPVQHSSSGLRKSA*STQLQR
Trigger: TCTTTGGAGCTGGGTACTGCAAGCCGACTTCCTCAG...GCCTGAAGATGAATGTTGGACTGGCCAAACATCTGATGCTGGGACATATCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR GCA 90 bp TCCTCATCCAACGTGCTGGAATGGGTAGAAACAACTCCAAAGGATCCCAAAGGCCTTCGAACAAACGGGTaGAAGACTTCCCGATCACTG +
Preference number: 2 (lower is better)
Translates to: SSSNVLEWVETTPKDPKGLRTNG*KTSRSL
Trigger: CAGTGATCGGGAAGTCTTGCACCCGTTTGTTCGAAG...GCCTTTGGGATCCTTTGGAGTTGTTTCTACCCATTCCAGCACGTTGGATGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR CCA 90 bp TCCTCATCCAACGTGCTGGAATGGGTAGAAACAACTCCAAAGGATCCCAAAGGCATATCCAGGGACAGCTaGCTGTGCGTCTGTATCAGA +
Preference number: 2 (lower is better)
Translates to: SSSNVLEWVETTPKDPKGISRDS*LCVCIR
Trigger: TCTGATACAGACGCACAGCCAGCTGTCCCTGGATAT...GCCTTTGGGATCCTTTGGAGTTGTTTCTACCCATTCCAGCACGTTGGATGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR CCA 90 bp GTGCAAGACACAGATAAGTTCACAACCTCCACAGCCTTCAGGCTGTCCAGAGTAGGCCACATTCTCACCTaGCTCTGGACACCTTATAAC +
Preference number: 2 (lower is better)
Translates to: VQDTDKFTTSTAFRLSRVGHILT*LWTPYN
Trigger: GTTATAAGGTGTCCAGAGCCAGGTGAGAATGTGGCC...TACTCTGGACAGCCTGAAGGCTGTGGAGGTTGTGAACTTATCTGTGTCTTGCAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR CCA 90 bp GTGCAAGACACAGATAAGTTCACAACCTCCACAGCCTTCAGGCTGTCCAGAGTATTGAGAGCAAGATCCTaGGGAACCTTGGCTCTTGCT +
Preference number: 2 (lower is better)
Translates to: VQDTDKFTTSTAFRLSRVLRARS*GTLALA
Trigger: AGCAAGAGCCAAGGTTCCCCAGGATCTTGCTCTCAA...TACTCTGGACAGCCTGAAGGCTGTGGAGGTTGTGAACTTATCTGTGTCTTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR CCA 90 bp CTTCAGCTCTTGGTTTTTCAAAACCTGGGAATGAACGGAATGGGTCACAGTGGGCAAGGTGAACCGCTTTaGCTTTGCTGGCCTGTTGAG +
Preference number: 2 (lower is better)
Translates to: LQLLVFQNLGMNGMGHSGQGEPL*LCWPVE
Trigger: CTCAACAGGCCAGCAAAGCCAAAGCGGTTCACCTTG...CCCACTGTGACCCATTCCGTTCATTCCCAGGTTTTGAAAAACCAAGAGCTGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR CAA 90 bp AACACCTGGAGTGTTCTCAGTCCTGCCATCAGGAAGACAGTGTCCTaGAGCATCAAACTGCTTCCCTTTCCCTTTGGGGATGTCTATGTA +
Preference number: 2 (lower is better)
Translates to: NTWSVLSPAIRKTVS*SIKLLPFPFGDVYV
Trigger: TACATAGACATCCCCAAAGGGAAAGGGAAGCAGTTTGATGCTCAAGGACACTGTCTTCCTGATGGCAGGACTGAGAACACTCCAGGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR TCA 90 bp GGGATGTCTATGTATCCGGGGCCCTGCTGGTTGTCAGCATCTAAAACTATCTCCGAGCACATGTCCATATaGTTTTGTGTGGCCACATTC +
Preference number: 2 (lower is better)
Translates to: GMSMYPGPCWLSASKTISEHMSI*FCVATF
Trigger: GAATGTGGCCACACAAAATCATATGGACATGTGCTC...GGAGATAGTTTTAGATGCTGACAACCAGCAGGGCCCCGGATACATAGACATCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR CCA 90 bp CCACATCTGCCACTGGATATGTCCCAGCATCAGATGTTTGGCCAGTCCAACATTAGTAAAACTGATCAATaGCTGCTGCAGAGCCACCAG +
Preference number: 2 (lower is better)
Translates to: PHLPLDMSQHQMFGQSNISKTDQ*LLQSHQ
Trigger: CTGGTGGCTCTGCAGCAGCCATTGATCAGTTTTACT...AATGTTGGACTGGCCAAACATCTGATGCTGGGACATATCCAGTGGCAGATGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR CCA 90 bp GCACCTGATGTTGAGAGAGACCCTCAACCTCTGAGATGCCACTGTTGGAAAGAGCCATATGATTTTGTGTaGCCACATTCTCACCTGGCT +
Preference number: 2 (lower is better)
Translates to: APDVERDPQPLRCHCWKEPYDFV*PHSHLA
Trigger: AGCCAGGTGAGAATGTGGCCACACAAAATCATATGG...CTCTTTCCAACAGTGGCATCTCAGAGGTTGAGGGTCTCTCTCAACATCAGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR CCA 90 bp CCCATCCAGGCCATGGACACAGACAACCAGGTGAATTCCATCTTCCAAATTTTCTCTGGGCTACTGATGTaGGGAGCAGATACAGACTTG +
Preference number: 2 (lower is better)
Translates to: PIQAMDTDNQVNSIFQIFSGLLM*GADTDL
Trigger: CAAGTCTGTATCTGCTCCCCACATCAGTAGCCCAGA...GAAAATTTGGAAGATGGAATTCACCTGGTTGTCTGTGTCCATGGCCTGGATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR CCA 90 bp CTTCAGCTCTTGGTTTTTCAAAACCTGGGAATGAACGGAATGGGTCACAGTGGGTATCCGGGGCCCTGCTaGTTGTCAGCATCTAAAACT +
Preference number: 2 (lower is better)
Translates to: LQLLVFQNLGMNGMGHSGYPGPC*LSASKT
Trigger: AGTTTTAGATGCTGACAACCAGCAGGGCCCCGGATA...CCCACTGTGACCCATTCCGTTCATTCCCAGGTTTTGAAAAACCAAGAGCTGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR CCA 90 bp CTTCAGCTCTTGGTTTTTCAAAACCTGGGAATGAACGGAATGGGTCACAGTGGGGCTTCCCTTTCCCTTTaGGGATGTCTATGTATCCGG +
Preference number: 2 (lower is better)
Translates to: LQLLVFQNLGMNGMGHSGASLSL*GCLCIR
Trigger: CCGGATACATAGACATCCCCAAAGGGAAAGGGAAGC...CCCACTGTGACCCATTCCGTTCATTCCCAGGTTTTGAAAAACCAAGAGCTGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR TCA 90 bp GATGATGTTGCCAAGAGAATGGCCAATGAAGCTAATTCGGGATATGGAGAGGTTTTCCGGTATAAGATCTaGAAGACCCGGCTGTGCACG +
Preference number: 2 (lower is better)
Translates to: DDVAKRMANEANSGYGEVFRYKI*KTRLCT
Trigger: CGTGCACAGCCGGGTCTTTCAGATCTTATACCGGAA...AACCTCTCCATATCCCGAATTAGCTTCATTGGCCATTCTCTTGGCAACATCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR GCA 90 bp ACATTTCAATCCTGGCTGAATGAAATGGCACATAACGGTCTTGGGGAGAAGCAATCCCTGAAGGTCAGCTaGAGTAGAGACCCGGATTTC +
Preference number: 2 (lower is better)
Translates to: TFQSWLNEMAHNGLGEKQSLKVS*SRDPDF
Trigger: GAAATCCGGGTCTCTACTGCAGCTGACCTTCAGGGA...TTGCTTCTCCCCAAGACCGTTATGTGCCATTTCATTCAGCCAGGATTGAAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
3UTR-3UTR GCA 90 bp GCACCTGATGTTGAGAGAGACCCTCAACCTCTGAGATGCCACTGTTGGAAAGAGGTTGTTGATCATTTCTaGATAAACTGGCCCTGTGTG +
Preference number: 2 (lower is better)
Translates to: APDVERDPQPLRCHCWKEVVDHF*INWPCV
Trigger: CACACAGGGCCAGTTTATGCAGAAATGATCAACAAC...CTCTTTCCAACAGTGGCATCTCAGAGGTTGAGGGTCTCTCTCAACATCAGGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR GCA 90 bp CCCCCTTCTGCTAGGTTAGTCTCACTCAGTGTTCCCTACTACAGACAAAGATGTTGTGGATCAGGGCTCTaGATAGAAGAATTCTGGGGA +
Preference number: 2 (lower is better)
Translates to: PPSARLVSLSVPYYRQRCCGSGL*IEEFWG
Trigger: TCCCCAGAATTCTTCTATGCAGAGCCCTGATCCACA...ACATCTTTGTCTGTAGTAGGGAACACTGAGTGAGACTAACCTAGCAGAAGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395297.6
3UTR-3UTR CCA 90 bp ACCTTTACCAAGCCAGGAGCCTCTTCCTGGACGAGTAAAACTGATCAATGGCTGCCACAGCATCATTTATaGGTACCTCTTCATTCCGGT +
Preference number: 2 (lower is better)
Translates to: TFTKPGASSWTSKTDQWLPQHHL*VPLHSG
Trigger: ACCGGAATGAAGAGGTACCCATAAATGATGCTGTGG...CAGCCATTGATCAGTTTTACTCGTCCAGGAAGAGGCTCCTGGCTTGGTAAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR CAA 90 bp AGAAGTATCCACATCTGCCACTGGATATGTCCCAGCATCAGATGTTaGGCCAGTCCAACATTCATCTTCAGGCACACCTGCTTTGTTTTG +
Preference number: 2 (lower is better)
Translates to: RSIHICHWICPSIRC*ASPTFIFRHTCFVL
Trigger: CAAAACAAAGCAGGTGTGCCTGAAGATGAATGTTGGACTGGCCAAACATCTGATGCTGGGACATATCCAGTGGCAGATGTGGATACTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR TCA 90 bp AAAGTGCAGTCCTTGGCTTCAACCAGAGGGCCCAGGAGGTTGTTGATCATTTCTCATTTCAATCCTGGCTaGATGAAATGGCACATAACG +
Preference number: 2 (lower is better)
Translates to: KVQSLASTRGPRRLLIISHFNPG*MKWHIT
Trigger: CGTTATGTGCCATTTCATTCAGCCAGGATTGAAATG...AGAAATGATCAACAACCTCCTGGGCCCTCTGGTTGAAGCCAAGGACTGCACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
3UTR-3UTR TCA 90 bp ATGCCTGAATCAGATATGATGGATGAAGATCTCTTGATGACCCCGGATAGCACTTGCAGTTCTCAGAGGTaGTGTAGAAGCTTCCCTCTG +
Preference number: 2 (lower is better)
Translates to: MPESDMMDEDLLMTPDSTCSSQR*CRSFPL
Trigger: CAGAGGGAAGCTTCTACATCACCTCTGAGAACTGCA...AGTGCTATCCGGGGTCATCAAGAGATCTTCATCCATCATATCTGATTCAGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR GCA 90 bp AAACATCCTCTCACTGACTTCCTCATCCAACGTGCTGGAATGGGTAGAAACAACGGAGACAGGTGGCAGTaGAAGACACAGATAAGTTCA +
Preference number: 2 (lower is better)
Translates to: KHPLTDFLIQRAGMGRNNGDRWQ*KTQISS
Trigger: TGAACTTATCTGTGTCTTGCACTGCCACCTGTCTCC...GTTGTTTCTACCCATTCCAGCACGTTGGATGAGGAAGTCAGTGAGAGGATGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR CCA 90 bp GTGCAAGACACAGATAAGTTCACAACCTCCACAGCCTTCAGGCTGTCCAGAGTACATTTCTGCATAAACTaGCCCTGTGTGTCTGTCTTT +
Preference number: 2 (lower is better)
Translates to: VQDTDKFTTSTAFRLSRVHFCIN*PCVSVF
Trigger: AAAGACAGACACACAGGGCCAGTTTATGCAGAAATG...TACTCTGGACAGCCTGAAGGCTGTGGAGGTTGTGAACTTATCTGTGTCTTGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR CAA 90 bp TTGTCTGAAGAGATGGCATTTTGGTGGCTTCCACCTACTACCACTTaGCTTAGCCCAGTCCTGTCTAATCCATACTTATCTCTAGAGCTC +
Preference number: 2 (lower is better)
Translates to: LSEEMAFWWLPPTTT*LSPVLSNPYLSLEL
Trigger: GAGCTCTAGAGATAAGTATGGATTAGACAGGACTGGGCTAAGCAAAGTGGTAGTAGGTGGAAGCCACCAAAATGCCATCTCTTCAGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR TCA 90 bp ACACTCCTGCAAAGCTGCCCATCTGGACTCATTCCCATGGTCTGCTTTTATTTTTGTTCTCCTCCTATCTaGTCTCACTTTTGTCCCTGT +
Preference number: 2 (lower is better)
Translates to: TLLQSCPSGLIPMVCFYFCSPPI*SHFCPC
Trigger: ACAGGGACAAAAGTGAGATCAGATAGGAGGAGAACA...AAAATAAAAGCAGACCATGGGAATGAGTCCAGATGGGCAGCTTTGCAGGAGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395297.6
3UTR-3UTR TCA 90 bp CTTCAGCTCTTGGTTTTTCAAAACCTGGGAATGAACGGAATGGGTCACAGTGGGAGTGCAGATCCACCTTaGGTTGAAAATCTACTTCAC +
Preference number: 2 (lower is better)
Translates to: LQLLVFQNLGMNGMGHSGSADPP*VENLLH
Trigger: GTGAAGTAGATTTTCAACTCAAGGTGGATCTGCACT...CCCACTGTGACCCATTCCGTTCATTCCCAGGTTTTGAAAAACCAAGAGCTGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR TCA 90 bp CCCCCTTCTGCTAGGTTAGTCTCACTCAGTGTTCCCTACTACAGACAAAGATGTTGCTCACTGCTGTTATaGAATAGAACTGGGATTTGT +
Preference number: 2 (lower is better)
Translates to: PPSARLVSLSVPYYRQRCCSLLL*NRTGIC
Trigger: ACAAATCCCAGTTCTATTTCATAACAGCAGTGAGCA...ACATCTTTGTCTGTAGTAGGGAACACTGAGTGAGACTAACCTAGCAGAAGGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
3UTR-3UTR TCA 90 bp AGATGTACTTTCTACACAATTATAATAGATGCTCAGAGGCCAGAGAGGGTTTACATCCCCAGTGGAAAGTaGCCAGAGGACTCAGTGAAC +
Preference number: 2 (lower is better)
Translates to: RCTFYTIIIDAQRPERVYIPSGK*PEDSVN
Trigger: GTTCACTGAGTCCTCTGGTCACTTTCCACTGGGGAT...GTAAACCCTCTCTGGCCTCTGAGCATCTATTATAATTGTGTAGAAAGTACATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395297.6
3UTR-3UTR TCA 90 bp GTGAGGACCGATCGGATGATGATGTTGCCAAGAGAATGGCCAATGAAGCTAATTGATCTGGTAATACAATaGGCCTTGGAGGTAAGTCTA +
Preference number: 2 (lower is better)
Translates to: VRTDRMMMLPREWPMKLIDLVIQ*ALEVSL
Trigger: TAGACTTACCTCCAAGGCTCATTGTATTACCAGATC...AATTAGCTTCATTGGCCATTCTCTTGGCAACATCATCATCCGATCGGTCCTCAC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR GCA 90 bp CCCCCTTCTGCTAGGTTAGTCTCACTCAGTGTTCCCTACTACAGACAAAGATGTACAAATATGTTCCACTaGTGCACAGAGATTAACCTG +
Preference number: 2 (lower is better)
Translates to: PPSARLVSLSVPYYRQRCTNMFH*CTEINL
Trigger: CAGGTTAATCTCTGTGCAGCAGTGGAACATATTTGT...ACATCTTTGTCTGTAGTAGGGAACACTGAGTGAGACTAACCTAGCAGAAGGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
3UTR-3UTR CCA 90 bp GATGATGTTGCCAAGAGAATGGCCAATGAAGCTAATTCGGGATATGGAGAGGTTTCCAACGTGCTGGAATaGGTAGAAACAACTCCAAAG +
Preference number: 2 (lower is better)
Translates to: DDVAKRMANEANSGYGEVSNVLE*VETTPK
Trigger: CTTTGGAGTTGTTTCTACCCATTCCAGCACGTTGGA...AACCTCTCCATATCCCGAATTAGCTTCATTGGCCATTCTCTTGGCAACATCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR TCA 90 bp ACACTCCTGCAAAGCTGCCCATCTGGACTCATTCCCATGGTCTGCTTTTATTTTTTTTTATCAACGCAGTaGCCTTTCCTAGCCCTTTAT +
Preference number: 2 (lower is better)
Translates to: TLLQSCPSGLIPMVCFYFFLSTQ*PFLALY
Trigger: ATAAAGGGCTAGGAAAGGTCACTGCGTTGATAAAAA...AAAATAAAAGCAGACCATGGGAATGAGTCCAGATGGGCAGCTTTGCAGGAGTGT
43% GC, longest homopolymer 9 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395297.6
3UTR-3UTR TCA 90 bp ACACTCCTGCAAAGCTGCCCATCTGGACTCATTCCCATGGTCTGCTTTTATTTTTCAGTCTTTGAGACCTaGCTATTAAACATCCTGGTA +
Preference number: 2 (lower is better)
Translates to: TLLQSCPSGLIPMVCFYFSVFET*LLNILV
Trigger: TACCAGGATGTTTAATAGTCAGGTCTCAAAGACTGA...AAAATAAAAGCAGACCATGGGAATGAGTCCAGATGGGCAGCTTTGCAGGAGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395297.6
3UTR-3UTR TCA 90 bp GATGATGTTGCCAAGAGAATGGCCAATGAAGCTAATTCGGGATATGGAGAGGTTTTGGAAAGAGCTTGCTaGCCCACATTCAAGTCTTTA +
Preference number: 2 (lower is better)
Translates to: DDVAKRMANEANSGYGEVLERAC*PTFKSL
Trigger: TAAAGACTTGAATGTGGGTCAGCAAGCTCTTTCCAA...AACCTCTCCATATCCCGAATTAGCTTCATTGGCCATTCTCTTGGCAACATCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR TCA 90 bp AGATGTACTTTCTACACAATTATAATAGATGCTCAGAGGCCAGAGAGGGTTTACATACAGCACTCCTCATaGAGAACCAGAGTCTATGCC +
Preference number: 2 (lower is better)
Translates to: RCTFYTIIIDAQRPERVYIQHSS*RTRVYA
Trigger: GGCATAGACTCTGGTTCTTCATGAGGAGTGCTGTAT...GTAAACCCTCTCTGGCCTCTGAGCATCTATTATAATTGTGTAGAAAGTACATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
3UTR-3UTR CCA 90 bp CTCCTCCTATCTGATCTCACTTTTGTCCCTGTCGTCTATTGGTTTTTATCAACGAACATAGCATGTCTTTaGAAGTGTATCAGCAGGAGC +
Preference number: 2 (lower is better)
Translates to: LLLSDLTFVPVVYWFLSTNIACL*KCISRS
Trigger: GCTCCTGCTGATACACTTCCAAAGACATGCTATGTT...CGTTGATAAAAACCAATAGACGACAGGGACAAAAGTGAGATCAGATAGGAGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395297.6
3UTR CAA 90 bp TTGAGTCACTTACCAATAACAGCTTATGTTGAGTCTTCAGTCTGGTaGTTCTCCTCCTATCTGATCTCACTTTTGTCCCTGTCGTCTATT +
Preference number: 2 (lower is better)
Translates to: LSHLPITAYVESSVW*FSSYLISLLSLSSI
Trigger: AATAGACGACAGGGACAAAAGTGAGATCAGATAGGAGGAGAACAACCAGACTGAAGACTCAACATAAGCTGTTATTGGTAAGTGACTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395297.6
3UTR-3UTR CCA 90 bp AAACATCCTCTCACTGACTTCCTCATCCAACGTGCTGGAATGGGTAGAAACAACTGTAGGACTTGTCACTaGAACATCAAAATTAGGATA +
Preference number: 2 (lower is better)
Translates to: KHPLTDFLIQRAGMGRNNCRTCH*NIKIRI
Trigger: TATCCTAATTTTGATGTTCCAGTGACAAGTCCTACA...GTTGTTTCTACCCATTCCAGCACGTTGGATGAGGAAGTCAGTGAGAGGATGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR GCA 90 bp AGATGTACTTTCTACACAATTATAATAGATGCTCAGAGGCCAGAGAGGGTTTACAGTCACCCTGCTCACTaGTGTTATGAAATAGAACTG +
Preference number: 2 (lower is better)
Translates to: RCTFYTIIIDAQRPERVYSHPAH*CYEIEL
Trigger: CAGTTCTATTTCATAACAGCAGTGAGCAGGGTGACT...GTAAACCCTCTCTGGCCTCTGAGCATCTATTATAATTGTGTAGAAAGTACATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
3UTR-3UTR GCA 90 bp CTTATCCCTACTGTCCAGGTTCATTCATCTCTTCCATACAACGAAATGATTCTTAATATGTTCCACTGCTaGACAGAGATTAACCTGAGT +
Preference number: 2 (lower is better)
Translates to: LIPTVQVHSSLPYNEMILNMFHC*TEINLS
Trigger: ACTCAGGTTAATCTCTGTGCAGCAGTGGAACATATT...AAGAATCATTTCGTTGTATGGAAGAGATGAATGAACCTGGACAGTAGGGATAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
3UTR-3UTR GCA 90 bp ACAAAAATTACGCAGAGAATGAAGACATACAAGACCATTATCTTGGCAGGCATTCATTGTGTGGAACTCTaGCTTTGCAAGACATTCAAC +
Preference number: 2 (lower is better)
Translates to: TKITQRMKTYKTIILAGIHCVEL*LCKTFN
Trigger: GTTGAATGTCTTGCAAAGGCAGAGTTCCACACAATG...AATGCCTGCCAAGATAATGGTCTTGTATGTCTTCATTCTCTGCGTAATTTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
3UTR-3UTR TCA 90 bp ACAAAAATTACGCAGAGAATGAAGACATACAAGACCATTATCTTGGCAGGCATTGTTGAAGCTTCATTCTaGAATGGTGAGGTCTGTAAA +
Preference number: 2 (lower is better)
Translates to: TKITQRMKTYKTIILAGIVEASF*NGEVCK
Trigger: TTTACAGACCTCACCATTTCAGAATGAAGCTTCAAC...AATGCCTGCCAAGATAATGGTCTTGTATGTCTTCATTCTCTGCGTAATTTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
3UTR-3UTR TCA 90 bp ACAAAAATTACGCAGAGAATGAAGACATACAAGACCATTATCTTGGCAGGCATTAACCCATATGCATTATaGCCAGGATATAACAAGCAT +
Preference number: 2 (lower is better)
Translates to: TKITQRMKTYKTIILAGINPYAL*PGYNKH
Trigger: ATGCTTGTTATATCCTGGTCATAATGCATATGGGTT...AATGCCTGCCAAGATAATGGTCTTGTATGTCTTCATTCTCTGCGTAATTTTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
3UTR CAA 90 bp AACATTCATCTTCAGGCACACCTGCTTTGTTTTGAAATTCACCAATaGATATATACACCTGAGATTCAGAGCACATGTCCATATGATTTT +
Preference number: 2 (lower is better)
Translates to: NIHLQAHLLCFEIHQ*IYTPEIQSTCPYDF
Trigger: AAAATCATATGGACATGTGCTCTGAATCTCAGGTGTATATATCAATTGGTGAATTTCAAAACAAAGCAGGTGTGCCTGAAGATGAATGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR TCA 72 bp TCCGGGGGTGGAAGTGCAGGCCAAGCGTTCGGCTGCTaGCCATCGGTGCCCCAGCCACATCCCTCAACTGCT +
Preference number: 3 (lower is better)
Translates to: SGGGSAGQAFGC*PSVPQPHPSTA
Trigger: AGCAGTTGAGGGATGTGGCTGGGGCACCGATGGTCAGCAGCCGAACGCTTGGCCTGCACTTCCACCCCCGGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR CCA 72 bp GCACAGCGATGTGAGCGGCTCGGCCGATCAGGGTGTTaGCAGTGTTGGGCAGGGCGTGGAACACGTTGTGTC +
Preference number: 3 (lower is better)
Translates to: AQRCERLGRSGC*QCWAGRGTRCV
Trigger: GACACAACGTGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCGAGCCGCTCACATCGCTGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
3UTR CCA 72 bp ATGACCGGGACCTGGTGGTGCAGACCATTCCGGGGGTaGAAGTGCAGGCCAAGCGTTCGGCTGCTGACCATC +
Preference number: 3 (lower is better)
Translates to: MTGTWWCRPFRG*KCRPSVRLLTI
Trigger: GATGGTCAGCAGCCGAACGCTTGGCCTGCACTTCCACCCCCGGAATGGTCTGCACCACCAGGTCCCGGTCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR TCA 72 bp GACCCGGCTGTGCACGGTGCTGTCATGGACACAGGCTaGATGCAGGCTGCTGCTCTCTGTCTGCCCAGCGAT +
Preference number: 3 (lower is better)
Translates to: DPAVHGAVMDTG*MQAAALCLPSD
Trigger: ATCGCTGGGCAGACAGAGAGCAGCAGCCTGCATTCAGCCTGTGTCCATGACAGCACCGTGCACAGCCGGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR TCA 72 bp CCAGCTCCGTGTGTGGCAGCTCTGGGATGTCCCGCATaGTCACCAGGAAGTGGAGACGGAGACCCCGGTAAG +
Preference number: 3 (lower is better)
Translates to: PAPCVAALGCPA*SPGSGDGDPGK
Trigger: CTTACCGGGGTCTCCGTCTCCACTTCCTGGTGATCATGCGGGACATCCCAGAGCTGCCACACACGGAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR GCA 72 bp CAGGGTGTTCCAATCGCCGTCGATGTCCAGGCACTCTaGAGGCAGCGGGGGCATGCTAGTGAGGTACTCCGA +
Preference number: 3 (lower is better)
Translates to: QGVPIAVDVQAL*RQRGHASEVLR
Trigger: TCGGAGTACCTCACTAGCATGCCCCCGCTGCCTGCAGAGTGCCTGGACATCGACGGCGATTGGAACACCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR CCA 72 bp AACAGCAAGGGCCTCCAGCTCCGTGTGTGGCAGCTCTaGGATGTCCCGCATGATCACCAGGAAGTGGAGACG +
Preference number: 3 (lower is better)
Translates to: NSKGLQLRVWQL*DVPHDHQEVET
Trigger: CGTCTCCACTTCCTGGTGATCATGCGGGACATCCCAGAGCTGCCACACACGGAGCTGGAGGCCCTTGCTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR CAA 90 bp CGGCTCGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACACGTTGTATTAAAGTGCAGTCCTaGGCTTCAACCAGAGGGCCC +
Preference number: 3 (lower is better)
Translates to: RLGRSGCWQCWAGRGTRCIKVQS*ASTRGP
Trigger: GGGCCCTCTGGTTGAAGCCAAGGACTGCACTTTAAT...ACAACGTGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCGAGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
3UTR CCA 72 bp TGTGAGCGGCTCGGCCGATCAGGGTGTTGGCAGTGTTaGGCAGGGCGTGGAACACGTTGTGTCGGATTAAAG +
Preference number: 3 (lower is better)
Translates to: CERLGRSGCWQC*AGRGTRCVGLK
Trigger: CTTTAATCCGACACAACGTGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCGAGCCGCTCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
3UTR-3UTR CAA 90 bp CTGCTTCCCTTTCCCTTTGGGGATGTCTATGTATCCGGGGCCCTGCTGGTTGTCAGGTCTCGGTGCCACTaGTGTGCGTGCTGCATGCAG +
Preference number: 3 (lower is better)
Translates to: LLPFPFGDVYVSGALLVVRSRCH*CACCMQ
Trigger: CTGCATGCAGCACGCACACAAGTGGCACCGAGACCT...GACAACCAGCAGGGCCCCGGATACATAGACATCCCCAAAGGGAAAGGGAAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR GCA 72 bp TGGGCAGGGCGTGGAACACGTTGTGTCGGATTAAAGTaGAGTCCTTGGCTTCAACCAGAGGGCCCAGGAGGT +
Preference number: 3 (lower is better)
Translates to: WAGRGTRCVGLK*SPWLQPEGPGG
Trigger: ACCTCCTGGGCCCTCTGGTTGAAGCCAAGGACTGCACTTTAATCCGACACAACGTGTTCCACGCCCTGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
3UTR GCA 72 bp GAGTTCCGGTGGAGGGCATGTCTTCGAACAAACGGGTaGAAGACTTCCCGATCACTGGGCAACTCCAGAGCC +
Preference number: 3 (lower is better)
Translates to: EFRWRACLRTNG*KTSRSLGNSRA
Trigger: GGCTCTGGAGTTGCCCAGTGATCGGGAAGTCTTGCACCCGTTTGTTCGAAGACATGCCCTCCACCGGAACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR CCA 72 bp CGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTaGAACACGTTGTGTCGGATTAAAGTGCAGTCCTTG +
Preference number: 3 (lower is better)
Translates to: RPIRVLAVLGRA*NTLCRIKVQSL
Trigger: CAAGGACTGCACTTTAATCCGACACAACGTGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
3UTR CCA 72 bp CTCTCTGTCTGCCCAGCGATGGAGGCACTCAGTCTGTaGGGGATCCTTGAAGACACCTTCAAGGTCACTCGG +
Preference number: 3 (lower is better)
Translates to: LSVCPAMEALSL*GILEDTFKVTR
Trigger: CCGAGTGACCTTGAAGGTGTCTTCAAGGATCCCCCACAGACTGAGTGCCTCCATCGCTGGGCAGACAGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR CAA 90 bp CCCATCCAGGCCATGGACACAGACAACCAGGTGAATTCCATCTTCCAAATTTTCCGGCCGATCAGGGTGTaGGCAGTGTTGGGCAGGGCG +
Preference number: 3 (lower is better)
Translates to: PIQAMDTDNQVNSIFQIFRPIRV*AVLGRA
Trigger: CGCCCTGCCCAACACTGCCAACACCCTGATCGGCCG...GAAAATTTGGAAGATGGAATTCACCTGGTTGTCTGTGTCCATGGCCTGGATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR TCA 72 bp TTCTCCAGGAAGAGTTCTGAATCCAGCACAGCGATGTaGGCGGCTCGGCCGATCAGGGTGTTGGCAGTGTTG +
Preference number: 3 (lower is better)
Translates to: FSRKSSESSTAM*AARPIRVLAVL
Trigger: CAACACTGCCAACACCCTGATCGGCCGAGCCGCTCACATCGCTGTGCTGGATTCAGAACTCTTCCTGGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
3UTR TCA 72 bp TCACCGAGATCACAGACAGGTGGAAATAGTCGAACATaGCCGGGACCTGGTGGTGCAGACCATTCCGGGGGT +
Preference number: 3 (lower is better)
Translates to: SPRSQTGGNSRT*PGPGGADHSGG
Trigger: ACCCCCGGAATGGTCTGCACCACCAGGTCCCGGTCATGTTCGACTATTTCCACCTGTCTGTGATCTCGGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR TCA 72 bp CCAGGAACTGGGTCCACAGAGTCATCATGTGGGACGTaGGCCAGGCCAGATCCTTGCTTATCTGCTCAGCGA +
Preference number: 3 (lower is better)
Translates to: PGTGSTESSCGT*ARPDPCLSAQR
Trigger: TCGCTGAGCAGATAAGCAAGGATCTGGCCTGGCTCACGTCCCACATGATGACTCTGTGGACCCAGTTCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR CCA 72 bp GTAGGTCAGCACTGGGGCCTGTCCATCCTCTGGACCTaGACTCCTTCTAGAAGTATCCACATCTGCCACTGG +
Preference number: 3 (lower is better)
Translates to: VGQHWGLSILWT*TPSRSIHICHW
Trigger: CCAGTGGCAGATGTGGATACTTCTAGAAGGAGTCCAGGTCCAGAGGATGGACAGGCCCCAGTGCTGACCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR CAA 90 bp GTGAGCGGCTCGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACACTTCCTAGAAAACATCTaGAATGACACTCCAGGTAAC +
Preference number: 3 (lower is better)
Translates to: VSGSADQGVGSVGQGVEHFLENI*NDTPGN
Trigger: GTTACCTGGAGTGTCATTCAAGATGTTTTCTAGGAA...GTGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCGAGCCGCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR TCA 72 bp CTAACCAGGGTGCTGTTGTTGTACAGGGTTCCCAGGTaGGGCCCAGAGAGTGACAGGAACGTGTGGAGTTTG +
Preference number: 3 (lower is better)
Translates to: LTRVLLLYRVPR*GPESDRNVWSL
Trigger: CAAACTCCACACGTTCCTGTCACTCTCTGGGCCTCACCTGGGAACCCTGTACAACAACAGCACCCTGGTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
3UTR TCA 72 bp GCCACTTGTGTGCGTGCTGCATGCAGTTCTCAGAGGTaGTGTAGAAGCTTCCCTCTGAGGAAGTCGGCTTGC +
Preference number: 3 (lower is better)
Translates to: ATCVRAACSSQR*CRSFPLRKSAC
Trigger: GCAAGCCGACTTCCTCAGAGGGAAGCTTCTACATCACCTCTGAGAACTGCATGCAGCACGCACACAAGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR GCA 72 bp GAGGAGCAACAGGCACAGGTCTCGGTGCCACTTGTGTaGGTGCTGCATGCAGTTCTCAGAGGTGATGTAGAA +
Preference number: 3 (lower is better)
Translates to: EEQQAQVSVPLV*VLHAVLRGDVE
Trigger: TTCTACATCACCTCTGAGAACTGCATGCAGCACGCACACAAGTGGCACCGAGACCTGTGCCTGTTGCTCCTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR CCA 72 bp GTCTGGGCCACCTTTACCAAGCCAGGAGCCTCTTCCTaGACGAGTAAAACTGATCAATGGCTGCTGCAGAGC +
Preference number: 3 (lower is better)
Translates to: VWATFTKPGASS*TSKTDQWLLQS
Trigger: GCTCTGCAGCAGCCATTGATCAGTTTTACTCGTCCAGGAAGAGGCTCCTGGCTTGGTAAAGGTGGCCCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR CAA 90 bp CGGATTAAAGTGCAGTCCTTGGCTTCAACCAGAGGGCCCAGGAGGTTGTTGATCTGGCACATAACGGTCTaGGGGAGAAGCAACCAGCAC +
Preference number: 3 (lower is better)
Translates to: RIKVQSLASTRGPRRLLIWHITV*GRSNQH
Trigger: GTGCTGGTTGCTTCTCCCCAAGACCGTTATGTGCCA...GATCAACAACCTCCTGGGCCCTCTGGTTGAAGCCAAGGACTGCACTTTAATCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
3UTR TCA 72 bp CCCAGCGATGGAGGCACTCAGTCTGTGGGGGATCCTTaGAGACACCTTCAAGGTCACTCGGATCTGGTAATA +
Preference number: 3 (lower is better)
Translates to: PSDGGTQSVGDP*RHLQGHSDLVI
Trigger: TATTACCAGATCCGAGTGACCTTGAAGGTGTCTTCAAGGATCCCCCACAGACTGAGTGCCTCCATCGCTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR GCA 72 bp ATGAACGGAATGGGTCACAGTGGGGCACACAGTGCCTaGTTTATGTTTAGCCTCCGGGAAGGCATTCACTCC +
Preference number: 3 (lower is better)
Translates to: MNGMGHSGAHSA*FMFSLREGIHS
Trigger: GGAGTGAATGCCTTCCCGGAGGCTAAACATAAAGCAGGCACTGTGTGCCCCACTGTGACCCATTCCGTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR CCA 72 bp GTCAATGTAGGTCAGCACTGGGGCCTGTCCATCCTCTaGACCTGGACTCCTTCTAGAAGTATCCACATCTGC +
Preference number: 3 (lower is better)
Translates to: VNVGQHWGLSIL*TWTPSRSIHIC
Trigger: GCAGATGTGGATACTTCTAGAAGGAGTCCAGGTCCAGAGGATGGACAGGCCCCAGTGCTGACCTACATTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR TCA 72 bp TTCAGGCACCTGATGTTGAGAGAGACCCTCAACCTCTaGGATGCCACTGTTGGAAAGAGCTTGCTGACCCAC +
Preference number: 3 (lower is better)
Translates to: FRHLMLRETLNL*DATVGKSLLTH
Trigger: GTGGGTCAGCAAGCTCTTTCCAACAGTGGCATCTCAGAGGTTGAGGGTCTCTCTCAACATCAGGTGCCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR GCA 72 bp TGCATATCTGAAGGTTCAGCAAAACCTCCATCTTGCTaGTTGGTGTCCGCATCTTCAGCAGCCTCCTCTGGG +
Preference number: 3 (lower is better)
Translates to: CISEGSAKPPSC*LVSASSAASSG
Trigger: CCCAGAGGAGGCTGCTGAAGATGCGGACACCAAGCAGCAAGATGGAGGTTTTGCTGAACCTTCAGATATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR CCA 72 bp TTACTTTCTGTGTGTCCACCCTCTAGGGAGTTCCGGTaGAGGGCATGTCTTCGAACAAACGGGTGCAAGACT +
Preference number: 3 (lower is better)
Translates to: LLSVCPPSREFR*RACLRTNGCKT
Trigger: AGTCTTGCACCCGTTTGTTCGAAGACATGCCCTCCACCGGAACTCCCTAGAGGGTGGACACACAGAAAGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR CCA 72 bp TATCTGAAGGTTCAGCAAAACCTCCATCTTGCTGCTTaGTGTCCGCATCTTCAGCAGCCTCCTCTGGGCTAC +
Preference number: 3 (lower is better)
Translates to: YLKVQQNLHLAA*CPHLQQPPLGY
Trigger: GTAGCCCAGAGGAGGCTGCTGAAGATGCGGACACCAAGCAGCAAGATGGAGGTTTTGCTGAACCTTCAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR CAA 90 bp GCACCTGATGTTGAGAGAGACCCTCAACCTCTGAGATGCCACTGTTGGAAAGAGCCACCTACTACCACTTaGCTTAGCCCAGTCCTGTCT +
Preference number: 3 (lower is better)
Translates to: APDVERDPQPLRCHCWKEPPTTT*LSPVLS
Trigger: AGACAGGACTGGGCTAAGCAAAGTGGTAGTAGGTGG...CTCTTTCCAACAGTGGCATCTCAGAGGTTGAGGGTCTCTCTCAACATCAGGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR CAA 90 bp GGAGGGCATGTCTTCGAACAAACGGGTGCAAGACTTCCCGATCACTGGGCAACTATGGATGAAGATCTCTaGATGACCCCGGATAGCACT +
Preference number: 3 (lower is better)
Translates to: GGHVFEQTGARLPDHWATMDEDL*MTPDST
Trigger: AGTGCTATCCGGGGTCATCAAGAGATCTTCATCCAT...AGTTGCCCAGTGATCGGGAAGTCTTGCACCCGTTTGTTCGAAGACATGCCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR TCA 72 bp AGTCCTTGGCTTCAACCAGAGGGCCCAGGAGGTTGTTaGTCATTTCTGCATAAACTGGCCCTGTGTGTCTGT +
Preference number: 3 (lower is better)
Translates to: SPWLQPEGPGGC*SFLHKLALCVC
Trigger: ACAGACACACAGGGCCAGTTTATGCAGAAATGATCAACAACCTCCTGGGCCCTCTGGTTGAAGCCAAGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
3UTR TCA 72 bp AACCGCTTTGGCTTTGCTGGCCTGTTGAGTTCCTGTTaGTGGCATCAGCAGCTGACGTACAGCTCAATTCAG +
Preference number: 3 (lower is better)
Translates to: NRFGFAGLLSSC*WHQQLTYSSIQ
Trigger: CTGAATTGAGCTGTACGTCAGCTGCTGATGCCATCAACAGGAACTCAACAGGCCAGCAAAGCCAAAGCGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR GCA 72 bp GTCAGCTGCAGTAGAGACCCGGATTTCTTCAGTTTCTaGATGAGCCATAAGCCTGTACTAACCAGGGTGCTG +
Preference number: 3 (lower is better)
Translates to: VSCSRDPDFFSF*MSHKPVLTRVL
Trigger: CAGCACCCTGGTTAGTACAGGCTTATGGCTCATGCAGAAACTGAAGAAATCCGGGTCTCTACTGCAGCTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
3UTR GCA 72 bp TTCAACCAGAGGGCCCAGGAGGTTGTTGATCATTTCTaGATAAACTGGCCCTGTGTGTCTGTCTTTGAGGGC +
Preference number: 3 (lower is better)
Translates to: FNQRAQEVVDHF*INWPCVSVFEG
Trigger: GCCCTCAAAGACAGACACACAGGGCCAGTTTATGCAGAAATGATCAACAACCTCCTGGGCCCTCTGGTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
3UTR GCA 72 bp CTCTGGACCTGGACTCCTTCTAGAAGTATCCACATCTaGCACTGGATATGTCCCAGCATCAGATGTTTGGCC +
Preference number: 3 (lower is better)
Translates to: LWTWTPSRSIHI*HWICPSIRCLA
Trigger: GGCCAAACATCTGATGCTGGGACATATCCAGTGGCAGATGTGGATACTTCTAGAAGGAGTCCAGGTCCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR GCA 72 bp CTGTGCATATCTGAAGGTTCAGCAAAACCTCCATCTTaGTGCTTGGTGTCCGCATCTTCAGCAGCCTCCTCT +
Preference number: 3 (lower is better)
Translates to: LCISEGSAKPPS*CLVSASSAASS
Trigger: AGAGGAGGCTGCTGAAGATGCGGACACCAAGCAGCAAGATGGAGGTTTTGCTGAACCTTCAGATATGCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR GCA 72 bp GCACCTGATGTTGAGAGAGACCCTCAACCTCTGAGATaGCACTGTTGGAAAGAGCTTGCTGACCCACATTCA +
Preference number: 3 (lower is better)
Translates to: APDVERDPQPLR*HCWKELADPHS
Trigger: TGAATGTGGGTCAGCAAGCTCTTTCCAACAGTGGCATCTCAGAGGTTGAGGGTCTCTCTCAACATCAGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR CCA 72 bp TCCGCATCTTCAGCAGCCTCCTCTGGGCTACTGATGTaGGGAGCAGATACAGACTTGGTTAACTTAGTGAGT +
Preference number: 3 (lower is better)
Translates to: SASSAASSGLLM*GADTDLVNLVS
Trigger: ACTCACTAAGTTAACCAAGTCTGTATCTGCTCCCCACATCAGTAGCCCAGAGGAGGCTGCTGAAGATGCGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR CAA 90 bp ACTGGATATGTCCCAGCATCAGATGTTTGGCCAGTCCAACATTCATCTTCAGGCGTCTGTGGGGGATCCTaGAAGACACCTTCAAGGTCA +
Preference number: 3 (lower is better)
Translates to: TGYVPASDVWPVQHSSSGVCGGS*KTPSRS
Trigger: TGACCTTGAAGGTGTCTTCAAGGATCCCCCACAGAC...GCCTGAAGATGAATGTTGGACTGGCCAAACATCTGATGCTGGGACATATCCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR TCA 72 bp GAGCCTCCGTCCCCCAATGCTGTTGAAGCTTCATTCTaGAATGGTGAGGTCTGTAAAAGCAGGTCTCAGCTA +
Preference number: 3 (lower is better)
Translates to: EPPSPNAVEASF*NGEVCKSRSQL
Trigger: TAGCTGAGACCTGCTTTTACAGACCTCACCATTTCAGAATGAAGCTTCAACAGCATTGGGGGACGGAGGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395297.6
ENST00000482951.6
3UTR TCA 72 bp AGATCCTGGGGAACCTTGGCTCTTGCTGTGCATATCTaGAGGTTCAGCAAAACCTCCATCTTGCTGCTTGGT +
Preference number: 3 (lower is better)
Translates to: RSWGTLALAVHI*RFSKTSILLLG
Trigger: ACCAAGCAGCAAGATGGAGGTTTTGCTGAACCTTCAGATATGCACAGCAAGAGCCAAGGTTCCCCAGGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR TCA 72 bp TCAACCTCTGAGATGCCACTGTTGGAAAGAGCTTGCTaGCCCACATTCAAGTCTTTAGGCATGCCCTTTGGG +
Preference number: 3 (lower is better)
Translates to: STSEMPLLERAC*PTFKSLGMPFG
Trigger: CCCAAAGGGCATGCCTAAAGACTTGAATGTGGGTCAGCAAGCTCTTTCCAACAGTGGCATCTCAGAGGTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR GCA 72 bp ATGTGGGACGTGAGCCAGGCCAGATCCTTGCTTATCTaGTCAGCGATCTTCTCTGGATTGTTCAACATCTGT +
Preference number: 3 (lower is better)
Translates to: MWDVSQARSLLI*SAIFSGLFNIC
Trigger: ACAGATGTTGAACAATCCAGAGAAGATCGCTGAGCAGATAAGCAAGGATCTGGCCTGGCTCACGTCCCACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR GCA 72 bp GTGTCATCCATAATGCAAGGTGAACCGCTTTGGCTTTaGTGGCCTGTTGAGTTCCTGTTGATGGCATCAGCA +
Preference number: 3 (lower is better)
Translates to: VSSIMQGEPLWL*WPVEFLLMASA
Trigger: TGCTGATGCCATCAACAGGAACTCAACAGGCCAGCAAAGCCAAAGCGGTTCACCTTGCATTATGGATGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR CCA 72 bp ACATCTGCCACTGGATATGTCCCAGCATCAGATGTTTaGCCAGTCCAACATTCATCTTCAGGCACACCTGCT +
Preference number: 3 (lower is better)
Translates to: TSATGYVPASDV*PVQHSSSGTPA
Trigger: AGCAGGTGTGCCTGAAGATGAATGTTGGACTGGCCAAACATCTGATGCTGGGACATATCCAGTGGCAGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR CCA 72 bp ACCTGGACTCCTTCTAGAAGTATCCACATCTGCCACTaGATATGTCCCAGCATCAGATGTTTGGCCAGTCCA +
Preference number: 3 (lower is better)
Translates to: TWTPSRSIHICH*ICPSIRCLASP
Trigger: TGGACTGGCCAAACATCTGATGCTGGGACATATCCAGTGGCAGATGTGGATACTTCTAGAAGGAGTCCAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR CCA 72 bp CTTATTGCTAGATTTTACGTCAATGTAGGTCAGCACTaGGGCCTGTCCATCCTCTGGACCTGGACTCCTTCT +
Preference number: 3 (lower is better)
Translates to: LIARFYVNVGQH*GLSILWTWTPS
Trigger: AGAAGGAGTCCAGGTCCAGAGGATGGACAGGCCCCAGTGCTGACCTACATTGACGTAAAATCTAGCAATAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR CCA 72 bp TCATCCATAATGCAAGGTGAACCGCTTTGGCTTTGCTaGCCTGTTGAGTTCCTGTTGATGGCATCAGCAGCT +
Preference number: 3 (lower is better)
Translates to: SSIMQGEPLWLC*PVEFLLMASAA
Trigger: AGCTGCTGATGCCATCAACAGGAACTCAACAGGCCAGCAAAGCCAAAGCGGTTCACCTTGCATTATGGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR TCA 72 bp TCATTTATGGGTACCTCTTCATTCCGGTATAAGATCTaGAAGACCCGGCTGTGCACGGTGCTGTCATGGACA +
Preference number: 3 (lower is better)
Translates to: SFMGTSSFRYKI*KTRLCTVLSWT
Trigger: TGTCCATGACAGCACCGTGCACAGCCGGGTCTTTCAGATCTTATACCGGAATGAAGAGGTACCCATAAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR TCA 72 bp TCTGGATTGTTCAACATCTGTAGCTCTGAGCACAGCTaGGAAAGTGTTTCTTCAACAGCAAGGGCCTCCAGC +
Preference number: 3 (lower is better)
Translates to: SGLFNICSSEHS*ESVSSTARASS
Trigger: GCTGGAGGCCCTTGCTGTTGAAGAAACACTTTCTCAGCTGTGCTCAGAGCTACAGATGTTGAACAATCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR GCA 72 bp CTACCAACTTATGGTTCTGTACTGAGCATGGGCACTTaGCTAGGTCAGGAAACACAATACCATGTGCTGCAC +
Preference number: 3 (lower is better)
Translates to: LPTYGSVLSMGT*LGQETQYHVLH
Trigger: GTGCAGCACATGGTATTGTGTTTCCTGACCTAGGCAAGTGCCCATGCTCAGTACAGAACCATAAGTTGGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
3UTR CCA 72 bp TCATTTGGCCAGAAAGGAGAAGCTGCTACCAACTTATaGTTCTGTACTGAGCATGGGCACTTGCCTAGGTCA +
Preference number: 3 (lower is better)
Translates to: SFGQKGEAATNL*FCTEHGHLPRS
Trigger: TGACCTAGGCAAGTGCCCATGCTCAGTACAGAACCATAAGTTGGTAGCAGCTTCTCCTTTCTGGCCAAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
3UTR CCA 72 bp AATGCTGTGTCATCCATAATGCAAGGTGAACCGCTTTaGCTTTGCTGGCCTGTTGAGTTCCTGTTGATGGCA +
Preference number: 3 (lower is better)
Translates to: NAVSSIMQGEPL*LCWPVEFLLMA
Trigger: TGCCATCAACAGGAACTCAACAGGCCAGCAAAGCCAAAGCGGTTCACCTTGCATTATGGATGACACAGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR CAA 90 bp TTATCCCTGAAGGTCAGCTGCAGTAGAGACCCGGATTTCTTCAGTTTCTGCATGGATCGGATGATGATGTaGCCAAGAGAATGGCCAATG +
Preference number: 3 (lower is better)
Translates to: LSLKVSCSRDPDFFSFCMDRMMM*PREWPM
Trigger: CATTGGCCATTCTCTTGGCAACATCATCATCCGATC...CATGCAGAAACTGAAGAAATCCGGGTCTCTACTGCAGCTGACCTTCAGGGATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
3UTR-3UTR CAA 90 bp GATGATGTTGCCAAGAGAATGGCCAATGAAGCTAATTCGGGATATGGAGAGGTTAGGGCGTGGAACACGTaGTGTCGGATTAAAGTGCAG +
Preference number: 3 (lower is better)
Translates to: DDVAKRMANEANSGYGEVRAWNT*CRIKVQ
Trigger: CTGCACTTTAATCCGACACAACGTGTTCCACGCCCT...AACCTCTCCATATCCCGAATTAGCTTCATTGGCCATTCTCTTGGCAACATCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
3UTR-3UTR CAA 90 bp TTATCCCTGAAGGTCAGCTGCAGTAGAGACCCGGATTTCTTCAGTTTCTGCATGCGTCCCCCAATGCTGTaGAAGCTTCATTCTGAAATG +
Preference number: 3 (lower is better)
Translates to: LSLKVSCSRDPDFFSFCMRPPML*KLHSEM
Trigger: CATTTCAGAATGAAGCTTCAACAGCATTGGGGGACG...CATGCAGAAACTGAAGAAATCCGGGTCTCTACTGCAGCTGACCTTCAGGGATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR CAA 90 bp GTGCAAGACACAGATAAGTTCACAACCTCCACAGCCTTCAGGCTGTCCAGAGTACATGTCCATATGATTTaGTGTGGCCACATTCTCACC +
Preference number: 3 (lower is better)
Translates to: VQDTDKFTTSTAFRLSRVHVHMI*CGHILT
Trigger: GGTGAGAATGTGGCCACACAAAATCATATGGACATG...TACTCTGGACAGCCTGAAGGCTGTGGAGGTTGTGAACTTATCTGTGTCTTGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR TCA 72 bp GGTAGAGGAAACATTTGCGCAAATCAGCATTATCCCTaGAGGTCAGCTGCAGTAGAGACCCGGATTTCTTCA +
Preference number: 3 (lower is better)
Translates to: GRGNICANQHYP*RSAAVETRISS
Trigger: TGAAGAAATCCGGGTCTCTACTGCAGCTGACCTTCAGGGATAATGCTGATTTGCGCAAATGTTTCCTCTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
3UTR TCA 72 bp AGTGCGTCTTCCATCCTTTCACCACCCAAGAGTAAATaGACTCGGAAGACCACAGCATCATTTATGGGTACC +
Preference number: 3 (lower is better)
Translates to: SASSILSPPKSK*TRKTTASFMGT
Trigger: GGTACCCATAAATGATGCTGTGGTCTTCCGAGTTCATTTACTCTTGGGTGGTGAAAGGATGGAAGACGCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR TCA 72 bp CTGTTCCCATCCAGGCCATGGACACAGACAACCAGGTaGATTCCATCTTCCAAATTTTCTTCCTCTTCCTCT +
Preference number: 3 (lower is better)
Translates to: LFPSRPWTQTTR*IPSSKFSSSSS
Trigger: AGAGGAAGAGGAAGAAAATTTGGAAGATGGAATTCACCTGGTTGTCTGTGTCCATGGCCTGGATGGGAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR GCA 72 bp CATTTGCGCAAATCAGCATTATCCCTGAAGGTCAGCTaGAGTAGAGACCCGGATTTCTTCAGTTTCTGCATG +
Preference number: 3 (lower is better)
Translates to: HLRKSALSLKVS*SRDPDFFSFCM
Trigger: CATGCAGAAACTGAAGAAATCCGGGTCTCTACTGCAGCTGACCTTCAGGGATAATGCTGATTTGCGCAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
3UTR GCA 72 bp AAAGTTGAGAGCAAGATCCTGGGGAACCTTGGCTCTTaGTGTGCATATCTGAAGGTTCAGCAAAACCTCCAT +
Preference number: 3 (lower is better)
Translates to: KVESKILGNLGS*CAYLKVQQNLH
Trigger: ATGGAGGTTTTGCTGAACCTTCAGATATGCACAGCAAGAGCCAAGGTTCCCCAGGATCTTGCTCTCAACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR CCA 72 bp TTGCTGACCCACATTCAAGTCTTTAGGCATGCCCTTTaGGGTTTCCTCAAGTGCTCTATGAAGAGATCTGGT +
Preference number: 3 (lower is better)
Translates to: LLTHIQVFRHAL*GFLKCSMKRSG
Trigger: ACCAGATCTCTTCATAGAGCACTTGAGGAAACCCCAAAGGGCATGCCTAAAGACTTGAATGTGGGTCAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR CAA 90 bp GCACCTGATGTTGAGAGAGACCCTCAACCTCTGAGATGCCACTGTTGGAAAGAGTTCATCAGAATCCATTaGGGATGGTTTTATGGTAGA +
Preference number: 3 (lower is better)
Translates to: APDVERDPQPLRCHCWKEFIRIH*GWFYGR
Trigger: TCTACCATAAAACCATCCCAAATGGATTCTGATGAA...CTCTTTCCAACAGTGGCATCTCAGAGGTTGAGGGTCTCTCTCAACATCAGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR GCA 72 bp AGTCATGGTCTAGGTATTGAGAACCCTGGTCCTAGATaGGTTTCCACACTTCAGAAGGGATTTTTGCAGAAG +
Preference number: 3 (lower is better)
Translates to: SHGLGIENPGPR*VSTLQKGFLQK
Trigger: CTTCTGCAAAAATCCCTTCTGAAGTGTGGAAACGCATCTAGGACCAGGGTTCTCAATACCTAGACCATGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
3UTR CCA 72 bp TCAAAAGGTAAAGAGCTAATGGAGGTGAGAGAAGCCTaGATGCCGCTTGGCAAACTTGTGTTACTTTCTGTG +
Preference number: 3 (lower is better)
Translates to: SKGKELMEVREA*MPLGKLVLLSV
Trigger: CACAGAAAGTAACACAAGTTTGCCAAGCGGCATCCAGGCTTCTCTCACCTCCATTAGCTCTTTACCTTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR CAA 90 bp TCAGTGCCCCCTTCTGCTAGGTTAGTCTCACTCAGTGTTCCCTACTACAGACAATGTCATTTAGTCTATTaGCTCAGCTTTCTCGAATCT +
Preference number: 3 (lower is better)
Translates to: SVPPSARLVSLSVPYYRQCHLVY*LSFLES
Trigger: AGATTCGAGAAAGCTGAGCAAATAGACTAAATGACA...TTGTCTGTAGTAGGGAACACTGAGTGAGACTAACCTAGCAGAAGGGGGCACTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
3UTR GCA 72 bp TCAAAAGAATACCACATGTCTACACTCCTGCAAAGCTaGCCATCTGGACTCATTCCCATGGTCTGCTTTTAT +
Preference number: 3 (lower is better)
Translates to: SKEYHMSTLLQS*PSGLIPMVCFY
Trigger: ATAAAAGCAGACCATGGGAATGAGTCCAGATGGGCAGCTTTGCAGGAGTGTAGACATGTGGTATTCTTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395297.6
3UTR CCA 72 bp AGAAAGGACTCACTGAGAAACCCTAAATCCATTGTGTaGAACTCTGCCTTTGCAAGACATTCAACTCTCCCT +
Preference number: 3 (lower is better)
Translates to: RKDSLRNPKSIV*NSAFARHSTLP
Trigger: AGGGAGAGTTGAATGTCTTGCAAAGGCAGAGTTCCACACAATGGATTTAGGGTTTCTCAGTGAGTCCTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
3UTR-3UTR CAA 90 bp CTGTCTTACTTATCCCTACTGTCCAGGTTCATTCATCTCTTCCATACAACGAAAGAGTCTTCAGTCTGGTaGTTCTCCTCCTATCTGATC +
Preference number: 3 (lower is better)
Translates to: LSYLSLLSRFIHLFHTTKESSVW*FSSYLI
Trigger: GATCAGATAGGAGGAGAACAACCAGACTGAAGACTC...TTTCGTTGTATGGAAGAGATGAATGAACCTGGACAGTAGGGATAAGTAAGACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
3UTR-3UTR CAA 90 bp ATGCCTGAATCAGATATGATGGATGAAGATCTCTTGATGACCCCGGATAGCACTCAGGACTGCAAGTTTTaGGTGCTCCATGTAAAAGAA +
Preference number: 3 (lower is better)
Translates to: MPESDMMDEDLLMTPDSTQDCKF*VLHVKE
Trigger: TTCTTTTACATGGAGCACCAAAAACTTGCAGTCCTG...AGTGCTATCCGGGGTCATCAAGAGATCTTCATCCATCATATCTGATTCAGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR TCA 72 bp CTCCCCTTTGAGTCACTTACCAATAACAGCTTATGTTaGGTCTTCAGTCTGGTTGTTCTCCTCCTATCTGAT +
Preference number: 3 (lower is better)
Translates to: LPFESLTNNSLC*VFSLVVLLLSD
Trigger: ATCAGATAGGAGGAGAACAACCAGACTGAAGACTCAACATAAGCTGTTATTGGTAAGTGACTCAAAGGGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395297.6
3UTR TCA 72 bp GTGAGTTTCAAGCTTAGCAGCACCATCTTCCCCTCTTaGTCTATTCCCTTTCCTAGAGTACTTAATTCATGG +
Preference number: 3 (lower is better)
Translates to: VSFKLSSTIFPS*SIPFPRVLNSW
Trigger: CCATGAATTAAGTACTCTAGGAAAGGGAATAGATCAAGAGGGGAAGATGGTGCTGCTAAGCTTGAAACTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR CCA 72 bp TTTGCAATTGCATCAAATGCTAACATAGCATGTCTTTaGAAGTGTATCAGCAGGAGCTTCACACGTGTGTGC +
Preference number: 3 (lower is better)
Translates to: FAIASNANIACL*KCISRSFTRVC
Trigger: GCACACACGTGTGAAGCTCCTGCTGATACACTTCCAAAGACATGCTATGTTAGCATTTGATGCAATTGCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
3UTR TCA 72 bp TTTGTCCCTGTCGTCTATTGGTTTTTATCAACGCAGTaGCCTTTCCTAGCCCTTTATTTTCCTAAGGCAAGA +
Preference number: 3 (lower is better)
Translates to: FVPVVYWFLSTQ*PFLALYFPKAR
Trigger: TCTTGCCTTAGGAAAATAAAGGGCTAGGAAAGGTCACTGCGTTGATAAAAACCAATAGACGACAGGGACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395297.6
3UTR TCA 72 bp ATGTTGAGTCTTCAGTCTGGTTGTTCTCCTCCTATCTaGTCTCACTTTTGTCCCTGTCGTCTATTGGTTTTT +
Preference number: 3 (lower is better)
Translates to: MLSLQSGCSPPI*SHFCPCRLLVF
Trigger: AAAAACCAATAGACGACAGGGACAAAAGTGAGATCAGATAGGAGGAGAACAACCAGACTGAAGACTCAACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395297.6
3UTR CCA 72 bp CACTTACCAATAACAGCTTATGTTGAGTCTTCAGTCTaGTTGTTCTCCTCCTATCTGATCTCACTTTTGTCC +
Preference number: 3 (lower is better)
Translates to: HLPITAYVESSV*LFSSYLISLLS
Trigger: GGACAAAAGTGAGATCAGATAGGAGGAGAACAACCAGACTGAAGACTCAACATAAGCTGTTATTGGTAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395297.6
3UTR CCA 72 bp CATATGATTTTGTGTGGCCACATTCTCACCTGGCTCTaGACACCTTATAACTTCTTCATCAGAATCCATTTG +
Preference number: 3 (lower is better)
Translates to: HMILCGHILTWL*TPYNFFIRIHL
Trigger: CAAATGGATTCTGATGAAGAAGTTATAAGGTGTCCAGAGCCAGGTGAGAATGTGGCCACACAAAATCATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR CAA 90 bp CTTATCCCTACTGTCCAGGTTCATTCATCTCTTCCATACAACGAAATGATTCTTTGTCCCTGTCGTCTATaGGTTTTTATCAACGCAGTG +
Preference number: 3 (lower is better)
Translates to: LIPTVQVHSSLPYNEMILCPCRL*VFINAV
Trigger: CACTGCGTTGATAAAAACCAATAGACGACAGGGACA...AAGAATCATTTCGTTGTATGGAAGAGATGAATGAACCTGGACAGTAGGGATAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
3UTR-3UTR CAA 90 bp TGGGCATCACATTTTCTTGAACAACTGACACATTTGAATCTATTGAGGATTCTACGTCCCCCAATGCTGTaGAAGCTTCATTCTGAAATG +
Preference number: 3 (lower is better)
Translates to: WASHFLEQLTHLNLLRILRPPML*KLHSEM
Trigger: CATTTCAGAATGAAGCTTCAACAGCATTGGGGGACG...TAGAATCCTCAATAGATTCAAATGTGTCAGTTGTTCAAGAAAATGTGATGCCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395297.6
3UTR CCA 72 bp TCTGGACACCTTATAACTTCTTCATCAGAATCCATTTaGGATGGTTTTATGGTAGACAAGACAAGGTCTTCC +
Preference number: 3 (lower is better)
Translates to: SGHLITSSSESI*DGFMVDKTRSS
Trigger: GGAAGACCTTGTCTTGTCTACCATAAAACCATCCCAAATGGATTCTGATGAAGAAGTTATAAGGTGTCCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR-3UTR CAA 90 bp AAACTTGTATTTACCAATAGTGTCACCTTTATCCCTCTTTACCTTAAGTCACCCACATTCCTTGCTCCCTaGTTTAGAAAACATGAGGAG +
Preference number: 3 (lower is better)
Translates to: KLVFTNSVTFIPLYLKSPTFLAP*FRKHEE
Trigger: CTCCTCATGTTTTCTAAACAAGGGAGCAAGGAATGT...GGGTGACTTAAGGTAAAGAGGGATAAAGGTGACACTATTGGTAAATACAAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395297.6
3UTR-3UTR CAA 90 bp ACAAAAATTACGCAGAGAATGAAGACATACAAGACCATTATCTTGGCAGGCATTTATCTGATCTCACTTTaGTCCCTGTCGTCTATTGGT +
Preference number: 3 (lower is better)
Translates to: TKITQRMKTYKTIILAGIYLISL*SLSSIG
Trigger: ACCAATAGACGACAGGGACAAAAGTGAGATCAGATA...AATGCCTGCCAAGATAATGGTCTTGTATGTCTTCATTCTCTGCGTAATTTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
3UTR TCA 72 bp ACACAAATATGTTCCACTGCTGCACAGAGATTAACCTaGGTTCTGAAATGCTTGTGTGCACTTAATCAGAAA +
Preference number: 3 (lower is better)
Translates to: TQICSTAAQRLT*VLKCLCALNQK
Trigger: TTTCTGATTAAGTGCACACAAGCATTTCAGAACTCAGGTTAATCTCTGTGCAGCAGTGGAACATATTTGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
3UTR-3UTR CAA 90 bp AAACTTGTATTTACCAATAGTGTCACCTTTATCCCTCTTTACCTTAAGTCACCCTTCCTAGAAAACATCTaGAATGACACTCCAGGTAAC +
Preference number: 3 (lower is better)
Translates to: KLVFTNSVTFIPLYLKSPFLENI*NDTPGN
Trigger: GTTACCTGGAGTGTCATTCAAGATGTTTTCTAGGAA...GGGTGACTTAAGGTAAAGAGGGATAAAGGTGACACTATTGGTAAATACAAGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395297.6
3UTR-3UTR CAA 90 bp ACAAAAATTACGCAGAGAATGAAGACATACAAGACCATTATCTTGGCAGGCATTAAGAAGACATTTCTATaGAAAGATAGCCAGCACCCT +
Preference number: 3 (lower is better)
Translates to: TKITQRMKTYKTIILAGIKKTFL*KDSQHP
Trigger: AGGGTGCTGGCTATCTTTCAATAGAAATGTCTTCTT...AATGCCTGCCAAGATAATGGTCTTGTATGTCTTCATTCTCTGCGTAATTTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
3UTR CCA 72 bp ACACCTTATAACTTCTTCATCAGAATCCATTTGGGATaGTTTTATGGTAGACAAGACAAGGTCTTCCCTAAA +
Preference number: 3 (lower is better)
Translates to: TPYNFFIRIHLG*FYGRQDKVFPK
Trigger: TTTAGGGAAGACCTTGTCTTGTCTACCATAAAACCATCCCAAATGGATTCTGATGAAGAAGTTATAAGGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR CCA 72 bp ATGTCCAGACAGCATATTGAAGTTAAAAATGGCATCTaGTTATTGGAGAAGATGATGATCATCAGATTCATC +
Preference number: 3 (lower is better)
Translates to: MSRQHIEVKNGI*LLEKMMIIRFI
Trigger: GATGAATCTGATGATCATCATCTTCTCCAATAACCAGATGCCATTTTTAACTTCAATATGCTGTCTGGACAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR GCA 90 bp GCGGCTCGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACACGTTGCTGCTGCTCTCTGTCTaGCCAGCGATGGAGGCACTC +
Preference number: 4 (lower is better)
Translates to: AARPIRVLAVLGRAWNTLLLLSV*PAMEAL
Trigger: GAGTGCCTCCATCGCTGGGCAGACAGAGAGCAGCAG...CAACGTGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCGAGCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR GCA 90 bp TGTGAGCGGCTCGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACACCCGGCTGTGCACGGTaGTGTCATGGACACAGGCTG +
Preference number: 4 (lower is better)
Translates to: CERLGRSGCWQCWAGRGTPGCAR*CHGHRL
Trigger: CAGCCTGTGTCCATGACAGCACCGTGCACAGCCGGG...TGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCGAGCCGCTCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR GCA 90 bp GTGAGCGGCTCGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACACTACCAGCCGGAGGTCTaGACTGTTCCCATCCAGGCC +
Preference number: 4 (lower is better)
Translates to: VSGSADQGVGSVGQGVEHYQPEV*TVPIQA
Trigger: GGCCTGGATGGGAACAGTGCAGACCTCCGGCTGGTA...GTGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCGAGCCGCTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp GTGAGCGGCTCGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACACGCCACCAGGGCAGCATaGACGGTCACCGAGATCACA +
Preference number: 4 (lower is better)
Translates to: VSGSADQGVGSVGQGVEHATRAA*TVTEIT
Trigger: TGTGATCTCGGTGACCGTCCATGCTGCCCTGGTGGC...GTGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCGAGCCGCTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR GCA 90 bp CGGCTCGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACACGTTGTCTGCTGCTCTCTGTCTaGCCAGCGATGGAGGCACTC +
Preference number: 4 (lower is better)
Translates to: RLGRSGCWQCWAGRGTRCLLLSV*PAMEAL
Trigger: GAGTGCCTCCATCGCTGGGCAGACAGAGAGCAGCAG...ACAACGTGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCGAGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp TGTGAGCGGCTCGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACAGGGTGTTGGCAGTGTTaGGCAGGGCGTGGAACACGT +
Preference number: 4 (lower is better)
Translates to: CERLGRSGCWQCWAGRGTGCWQC*AGRGTR
Trigger: ACGTGTTCCACGCCCTGCCCAACACTGCCAACACCC...TGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCGAGCCGCTCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp TGTGAGCGGCTCGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACATCATCATGTGGGACGTaGGCCAGGCCAGATCCTTGC +
Preference number: 4 (lower is better)
Translates to: CERLGRSGCWQCWAGRGTSSCGT*ARPDPC
Trigger: GCAAGGATCTGGCCTGGCTCACGTCCCACATGATGA...TGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCGAGCCGCTCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp TTGTCCGGTGTCTGGGCCACCTTTACCAAGCCAGGAGCCTCTTCCTGGACGAGTTCCAGCACAGCGATGTaGGCGGCTCGGCCGATCAGG +
Preference number: 4 (lower is better)
Translates to: LSGVWATFTKPGASSWTSSSTAM*AARPIR
Trigger: CCTGATCGGCCGAGCCGCTCACATCGCTGTGCTGGA...ACTCGTCCAGGAAGAGGCTCCTGGCTTGGTAAAGGTGGCCCAGACACCGGACAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR GCA 90 bp AAGCGTGGAGGAGCAACAGGCACAGGTCTCGGTGCCACTTGTGTGCGTGCTGCATTCCGGGGGTGGAAGTaGAGGCCAAGCGTTCGGCTG +
Preference number: 4 (lower is better)
Translates to: KRGGATGTGLGATCVRAAFRGWK*RPSVRL
Trigger: CAGCCGAACGCTTGGCCTGCACTTCCACCCCCGGAA...TGCAGCACGCACACAAGTGGCACCGAGACCTGTGCCTGTTGCTCCTCCACGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR GCA 90 bp AGCGGCTCGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACACGTTCTGATCAATGGCTGCTaGAGAGCCACCAGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: SGSADQGVGSVGQGVEHVLINGC*RATRAA
Trigger: TGCTGCCCTGGTGGCTCTGCAGCAGCCATTGATCAG...AACGTGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCGAGCCGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp TGTGAGCGGCTCGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACAAACATGACCGGGACCTaGTGGTGCAGACCATTCCGG +
Preference number: 4 (lower is better)
Translates to: CERLGRSGCWQCWAGRGTNMTGT*WCRPFR
Trigger: CCGGAATGGTCTGCACCACCAGGTCCCGGTCATGTT...TGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCGAGCCGCTCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp AGCGGCTCGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACACGTTAAGAGAATCCAGCCCTaGCAGGGGTCTCCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: SGSADQGVGSVGQGVEHVKRIQP*QGSPWA
Trigger: TGCCCAAGGAGACCCCTGCCAGGGCTGGATTCTCTT...AACGTGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCGAGCCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR GCA 90 bp GTGAGCGGCTCGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACACTGCCACTTGTGTGCGTaGTGCATGCAGTTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: VSGSADQGVGSVGQGVEHCHLCA*CMQFSE
Trigger: CTCTGAGAACTGCATGCAGCACGCACACAAGTGGCA...GTGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCGAGCCGCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR GCA 90 bp TCCAGGCACTCTGCAGGCAGCGGGGGCATGCTAGTGAGGTACTCCGAGTTCCGGTCGGTGCCACTTGTGTaGGTGCTGCATGCAGTTCTC +
Preference number: 4 (lower is better)
Translates to: SRHSAGSGGMLVRYSEFRSVPLV*VLHAVL
Trigger: GAGAACTGCATGCAGCACGCACACAAGTGGCACCGA...CCGGAACTCGGAGTACCTCACTAGCATGCCCCCGCTGCCTGCAGAGTGCCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR CCA 90 bp TTGTCCGGTGTCTGGGCCACCTTTACCAAGCCAGGAGCCTCTTCCTGGACGAGTCTCCAGCTCCGTGTGTaGCAGCTCTGGGATGTCCCG +
Preference number: 4 (lower is better)
Translates to: LSGVWATFTKPGASSWTSLQLRV*QLWDVP
Trigger: CGGGACATCCCAGAGCTGCCACACACGGAGCTGGAG...ACTCGTCCAGGAAGAGGCTCCTGGCTTGGTAAAGGTGGCCCAGACACCGGACAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR CCA 90 bp CGGCTCGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACACGTTGTCACAGAGTCATCATGTaGGACGTGAGCCAGGCCAGA +
Preference number: 4 (lower is better)
Translates to: RLGRSGCWQCWAGRGTRCHRVIM*DVSQAR
Trigger: TCTGGCCTGGCTCACGTCCCACATGATGACTCTGTG...ACAACGTGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCGAGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp CGGATTAAAGTGCAGTCCTTGGCTTCAACCAGAGGGCCCAGGAGGTTGTTGATCCCTGCTTCGGGCCTCTaGCCAGGCGACGGAGCTTGG +
Preference number: 4 (lower is better)
Translates to: RIKVQSLASTRGPRRLLIPASGL*PGDGAW
Trigger: CCAAGCTCCGTCGCCTGGTCAGAGGCCCGAAGCAGG...GATCAACAACCTCCTGGGCCCTCTGGTTGAAGCCAAGGACTGCACTTTAATCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp TCCAGGCACTCTGCAGGCAGCGGGGGCATGCTAGTGAGGTACTCCGAGTTCCGGGAGACCCTCAACCTCTaGGATGCCACTGTTGGAAAG +
Preference number: 4 (lower is better)
Translates to: SRHSAGSGGMLVRYSEFRETLNL*DATVGK
Trigger: CTTTCCAACAGTGGCATCTCAGAGGTTGAGGGTCTC...CCGGAACTCGGAGTACCTCACTAGCATGCCCCCGCTGCCTGCAGAGTGCCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR TCA 90 bp CGGCTCGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACACGTTGTGATGGCATCAGCAGCTaGCGTACAGCTCAATTCAGG +
Preference number: 4 (lower is better)
Translates to: RLGRSGCWQCWAGRGTRCDGISS*RTAQFR
Trigger: CCTGAATTGAGCTGTACGTCAGCTGCTGATGCCATC...ACAACGTGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCGAGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp TGTGAGCGGCTCGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACACTCCAGGAAGAGTTCTaGATCCAGCACAGCGATGTG +
Preference number: 4 (lower is better)
Translates to: CERLGRSGCWQCWAGRGTLQEEF*IQHSDV
Trigger: CACATCGCTGTGCTGGATTCAGAACTCTTCCTGGAG...TGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCGAGCCGCTCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR GCA 90 bp TCCAGGAACTGGGTCCACAGAGTCATCATGTGGGACGTGAGCCAGGCCAGATCCGCTGCTGACCATCGGTaGCCCAGCCACATCCCTCAA +
Preference number: 4 (lower is better)
Translates to: SRNWVHRVIMWDVSQARSAADHR*PSHIPQ
Trigger: TTGAGGGATGTGGCTGGGGCACCGATGGTCAGCAGC...GGATCTGGCCTGGCTCACGTCCCACATGATGACTCTGTGGACCCAGTTCCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR GCA 90 bp GAGGGCATGTCTTCGAACAAACGGGTGCAAGACTTCCCGATCACTGGGCAACTCACCGGGACCTGGTGGTaGAGACCATTCCGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: EGMSSNKRVQDFPITGQLTGTWW*RPFRGW
Trigger: CCACCCCCGGAATGGTCTGCACCACCAGGTCCCGGT...GAGTTGCCCAGTGATCGGGAAGTCTTGCACCCGTTTGTTCGAAGACATGCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR GCA 90 bp TCAGTGCCCCCTTCTGCTAGGTTAGTCTCACTCAGTGTTCCCTACTACAGACAATGGCGCCTCCCGGGCTaGGCTCACCTCTGGCGCCCT +
Preference number: 4 (lower is better)
Translates to: SVPPSARLVSLSVPYYRQWRLPG*AHLWRP
Trigger: AGGGCGCCAGAGGTGAGCGCAGCCCGGGAGGCGCCA...TTGTCTGTAGTAGGGAACACTGAGTGAGACTAACCTAGCAGAAGGGGGCACTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp GCGGCTCGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACACGTTGACTGTGTCCAGGAACTaGGTCCACAGAGTCATCATG +
Preference number: 4 (lower is better)
Translates to: AARPIRVLAVLGRAWNTLTVSRN*VHRVIM
Trigger: CATGATGACTCTGTGGACCCAGTTCCTGGACACAGT...CAACGTGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCGAGCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp CGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACACGTTGTGTCGGTCTAGGGAGTTCCGGTaGAGGGCATGTCTTCGAACA +
Preference number: 4 (lower is better)
Translates to: RPIRVLAVLGRAWNTLCRSREFR*RACLRT
Trigger: TGTTCGAAGACATGCCCTCCACCGGAACTCCCTAGA...CCGACACAACGTGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp CGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACACGTTGTGTCGGATCTCCACCAGGGGATaGTCTGCTCCAGCATCTGTT +
Preference number: 4 (lower is better)
Translates to: RPIRVLAVLGRAWNTLCRISTRG*SAPASV
Trigger: AACAGATGCTGGAGCAGACCATCCCCTGGTGGAGAT...CCGACACAACGTGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp GCGGCTCGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACACGTTGGCTTCCCTTTCCCTTTaGGGATGTCTATGTATCCGG +
Preference number: 4 (lower is better)
Translates to: AARPIRVLAVLGRAWNTLASLSL*GCLCIR
Trigger: CCGGATACATAGACATCCCCAAAGGGAAAGGGAAGC...CAACGTGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCGAGCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
3UTR CAA 72 bp GCGTGGAGGAGCAACAGGCACAGGTCTCGGTGCCACTaGTGTGCGTGCTGCATGCAGTTCTCAGAGGTGATG +
Preference number: 4 (lower is better)
Translates to: AWRSNRHRSRCH*CACCMQFSEVM
Trigger: CATCACCTCTGAGAACTGCATGCAGCACGCACACAAGTGGCACCGAGACCTGTGCCTGTTGCTCCTCCACGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR TCA 90 bp TGTGAGCGGCTCGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACACCACCCAAGAGTAAATaGACTCGGAAGACCACAGCA +
Preference number: 4 (lower is better)
Translates to: CERLGRSGCWQCWAGRGTPPKSK*TRKTTA
Trigger: TGCTGTGGTCTTCCGAGTTCATTTACTCTTGGGTGG...TGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCGAGCCGCTCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp CGGATTAAAGTGCAGTCCTTGGCTTCAACCAGAGGGCCCAGGAGGTTGTTGATCCAAGCGTTCGGCTGCTaGCCATCGGTGCCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: RIKVQSLASTRGPRRLLIQAFGC*PSVPQP
Trigger: TGGCTGGGGCACCGATGGTCAGCAGCCGAACGCTTG...GATCAACAACCTCCTGGGCCCTCTGGTTGAAGCCAAGGACTGCACTTTAATCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp CGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACACGTTGTGTCGGGAGTCACCACAAAGTTaGGAGCAAGATCCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: RPIRVLAVLGRAWNTLCRESPQS*EQDPGE
Trigger: TTCCCCAGGATCTTGCTCTCAACTTTGTGGTGACTC...CCGACACAACGTGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp TCCAGGAACTGGGTCCACAGAGTCATCATGTGGGACGTGAGCCAGGCCAGATCCCTCCTTGGGCACAGATaGGAAAGGGAGACAGGTGGC +
Preference number: 4 (lower is better)
Translates to: SRNWVHRVIMWDVSQARSLLGHR*ERETGG
Trigger: GCCACCTGTCTCCCTTTCTCATCTGTGCCCAAGGAG...GGATCTGGCCTGGCTCACGTCCCACATGATGACTCTGTGGACCCAGTTCCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR GCA 90 bp CTGCTTCCCTTTCCCTTTGGGGATGTCTATGTATCCGGGGCCCTGCTGGTTGTCAGGCACAGGTCTCGGTaGCACTTGTGTGCGTGCTGC +
Preference number: 4 (lower is better)
Translates to: LLPFPFGDVYVSGALLVVRHRSR*HLCACC
Trigger: GCAGCACGCACACAAGTGGCACCGAGACCTGTGCCT...GACAACCAGCAGGGCCCCGGATACATAGACATCCCCAAAGGGAAAGGGAAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR GCA 90 bp CGGCTCGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACACGTTGTCTTCGAACAAACGGGTaGAAGACTTCCCGATCACTG +
Preference number: 4 (lower is better)
Translates to: RLGRSGCWQCWAGRGTRCLRTNG*KTSRSL
Trigger: CAGTGATCGGGAAGTCTTGCACCCGTTTGTTCGAAG...ACAACGTGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCGAGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR GCA 90 bp GTGAGCGGCTCGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACACAAACCTCCATCTTGCTaGTTGGTGTCCGCATCTTCA +
Preference number: 4 (lower is better)
Translates to: VSGSADQGVGSVGQGVEHKPPSC*LVSASS
Trigger: TGAAGATGCGGACACCAAGCAGCAAGATGGAGGTTT...GTGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCGAGCCGCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR GCA 90 bp CGGCTCGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACACGTTGTATGTATCCGGGGCCCTaGTGGTTGTCAGCATCTAAA +
Preference number: 4 (lower is better)
Translates to: RLGRSGCWQCWAGRGTRCMYPGP*WLSASK
Trigger: TTTAGATGCTGACAACCAGCAGGGCCCCGGATACAT...ACAACGTGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCGAGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR GCA 90 bp CGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACACGTTGTGTCGGCAGAGTAAAGGTCTCTaGAGAAGTCAGATGGGACCC +
Preference number: 4 (lower is better)
Translates to: RPIRVLAVLGRAWNTLCRQSKGL*RSQMGP
Trigger: GGGTCCCATCTGACTTCTGCAGAGACCTTTACTCTG...CCGACACAACGTGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp AAGCGTGGAGGAGCAACAGGCACAGGTCTCGGTGCCACTTGTGTGCGTGCTGCATGCACGGTGCTGTCATaGACACAGGCTGAATGCAGG +
Preference number: 4 (lower is better)
Translates to: KRGGATGTGLGATCVRAACTVLS*TQAECR
Trigger: CCTGCATTCAGCCTGTGTCCATGACAGCACCGTGCA...TGCAGCACGCACACAAGTGGCACCGAGACCTGTGCCTGTTGCTCCTCCACGCTT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR CCA 90 bp GCGGCTCGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACACGTTGATCCACATCTGCCACTaGATATGTCCCAGCATCAGA +
Preference number: 4 (lower is better)
Translates to: AARPIRVLAVLGRAWNTLIHICH*ICPSIR
Trigger: TCTGATGCTGGGACATATCCAGTGGCAGATGTGGAT...CAACGTGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCGAGCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp AGCGGCTCGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACACGTTCTGAGATGCCACTGTTaGAAAGAGCTTGCTGACCCA +
Preference number: 4 (lower is better)
Translates to: SGSADQGVGSVGQGVEHVLRCHC*KELADP
Trigger: TGGGTCAGCAAGCTCTTTCCAACAGTGGCATCTCAG...AACGTGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCGAGCCGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp GTTGAGGTAATACCGGAACCGGGGCCGTGTGAGGACCGATCGGATGATGATGTTGGCCGATCAGGGTGTTaGCAGTGTTGGGCAGGGCGT +
Preference number: 4 (lower is better)
Translates to: VEVIPEPGPCEDRSDDDVGRSGC*QCWAGR
Trigger: ACGCCCTGCCCAACACTGCCAACACCCTGATCGGCC...AACATCATCATCCGATCGGTCCTCACACGGCCCCGGTTCCGGTATTACCTCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp ATACCGGAACCGGGGCCGTGTGAGGACCGATCGGATGATGATGTTGCCAAGAGACTTGGGAGTGCAGAGTaGCTGTGTCCAGGAACTGGG +
Preference number: 4 (lower is better)
Translates to: IPEPGPCEDRSDDDVAKRLGSAE*LCPGTG
Trigger: CCCAGTTCCTGGACACAGTCACTCTGCACTCCCAAG...TCTCTTGGCAACATCATCATCCGATCGGTCCTCACACGGCCCCGGTTCCGGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp ATACCGGAACCGGGGCCGTGTGAGGACCGATCGGATGATGATGTTGCCAAGAGACTCCTTGGGCACAGATaGGAAAGGGAGACAGGTGGC +
Preference number: 4 (lower is better)
Translates to: IPEPGPCEDRSDDDVAKRLLGHR*ERETGG
Trigger: GCCACCTGTCTCCCTTTCTCATCTGTGCCCAAGGAG...TCTCTTGGCAACATCATCATCCGATCGGTCCTCACACGGCCCCGGTTCCGGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp CGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACACGTTGTGTCGGGGCCCAGGAGGTTGTTaGTCATTTCTGCATAAACTG +
Preference number: 4 (lower is better)
Translates to: RPIRVLAVLGRAWNTLCRGPGGC*SFLHKL
Trigger: CAGTTTATGCAGAAATGATCAACAACCTCCTGGGCC...CCGACACAACGTGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp CCGTGTGAGGACCGATCGGATGATGATGTTGCCAAGAGAATGGCCAATGAAGCTTCCAGCACAGCGATGTaGGCGGCTCGGCCGATCAGG +
Preference number: 4 (lower is better)
Translates to: PCEDRSDDDVAKRMANEASSTAM*AARPIR
Trigger: CCTGATCGGCCGAGCCGCTCACATCGCTGTGCTGGA...AGCTTCATTGGCCATTCTCTTGGCAACATCATCATCCGATCGGTCCTCACACGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR GCA 90 bp CTGCTTCCCTTTCCCTTTGGGGATGTCTATGTATCCGGGGCCCTGCTGGTTGTCAGGCTGAATGCAGGCTaGTGCTCTCTGTCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: LLPFPFGDVYVSGALLVVRLNAG*CSLSAQ
Trigger: CTGGGCAGACAGAGAGCAGCAGCCTGCATTCAGCCT...GACAACCAGCAGGGCCCCGGATACATAGACATCCCCAAAGGGAAAGGGAAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR GCA 90 bp CACTCTGCAGGCAGCGGGGGCATGCTAGTGAGGTACTCCGAGTTCCGGATATCCAGGGACAGCTGGCTGTaGGTCTGTATCAGATTCTCC +
Preference number: 4 (lower is better)
Translates to: HSAGSGGMLVRYSEFRISRDSWL*VCIRFS
Trigger: GGAGAATCTGATACAGACGCACAGCCAGCTGTCCCT...GGATATCCGGAACTCGGAGTACCTCACTAGCATGCCCCCGCTGCCTGCAGAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR GCA 90 bp CGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACACGTTGTGTCGGAGAAGTATCCACATCTaGCACTGGATATGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: RPIRVLAVLGRAWNTLCRRSIHI*HWICPS
Trigger: GCTGGGACATATCCAGTGGCAGATGTGGATACTTCT...CCGACACAACGTGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR GCA 90 bp CGGCTCGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACACGTTGTAAACCTCCATCTTGCTaGTTGGTGTCCGCATCTTCA +
Preference number: 4 (lower is better)
Translates to: RLGRSGCWQCWAGRGTRCKPPSC*LVSASS
Trigger: TGAAGATGCGGACACCAAGCAGCAAGATGGAGGTTT...ACAACGTGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCGAGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR GCA 90 bp TGTGAGCGGCTCGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACACCTTGGCTCTTGCTGTaGATATCTGAAGGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: CERLGRSGCWQCWAGRGTPWLLL*ISEGSA
Trigger: TGCTGAACCTTCAGATATGCACAGCAAGAGCCAAGG...TGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCGAGCCGCTCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR GCA 90 bp CGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACACGTTGTGTCGGCCTTGGCTCTTGCTGTaGATATCTGAAGGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: RPIRVLAVLGRAWNTLCRPWLLL*ISEGSA
Trigger: TGCTGAACCTTCAGATATGCACAGCAAGAGCCAAGG...CCGACACAACGTGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR GCA 90 bp AGCGGCTCGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACACGTTGGGAACCTTGGCTCTTaGTGTGCATATCTGAAGGTT +
Preference number: 4 (lower is better)
Translates to: SGSADQGVGSVGQGVEHVGNLGS*CAYLKV
Trigger: AACCTTCAGATATGCACAGCAAGAGCCAAGGTTCCC...AACGTGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCGAGCCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR GCA 90 bp GCGGCTCGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACACGTTGCATGATGGAAGTGCCTaGCTTCAGCTCTTGGTTTTT +
Preference number: 4 (lower is better)
Translates to: AARPIRVLAVLGRAWNTLHDGSA*LQLLVF
Trigger: AAAAACCAAGAGCTGAAGGCAGGCACTTCCATCATG...CAACGTGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCGAGCCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp GCGGCTCGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACACGTTGCCACAGCATCATTTATaGGTACCTCTTCATTCCGGT +
Preference number: 4 (lower is better)
Translates to: AARPIRVLAVLGRAWNTLPQHHL*VPLHSG
Trigger: ACCGGAATGAAGAGGTACCCATAAATGATGCTGTGG...CAACGTGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCGAGCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp GTTGAGGTAATACCGGAACCGGGGCCGTGTGAGGACCGATCGGATGATGATGTTGCCACCAGGGCAGCATaGACGGTCACCGAGATCACA +
Preference number: 4 (lower is better)
Translates to: VEVIPEPGPCEDRSDDDVATRAA*TVTEIT
Trigger: TGTGATCTCGGTGACCGTCCATGCTGCCCTGGTGGC...AACATCATCATCCGATCGGTCCTCACACGGCCCCGGTTCCGGTATTACCTCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp ATACCGGAACCGGGGCCGTGTGAGGACCGATCGGATGATGATGTTGCCAAGAGACGTGTGTGGCAGCTCTaGGATGTCCCGCATGATCAC +
Preference number: 4 (lower is better)
Translates to: IPEPGPCEDRSDDDVAKRRVWQL*DVPHDH
Trigger: GTGATCATGCGGGACATCCCAGAGCTGCCACACACG...TCTCTTGGCAACATCATCATCCGATCGGTCCTCACACGGCCCCGGTTCCGGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp GTGAGCGGCTCGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACACCCTGCCTTCAGCTCTTaGTTTTTCAAAACCTGGGAA +
Preference number: 4 (lower is better)
Translates to: VSGSADQGVGSVGQGVEHPAFSS*FFKTWE
Trigger: TTCCCAGGTTTTGAAAAACCAAGAGCTGAAGGCAGG...GTGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCGAGCCGCTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp TGCTGTTGTTGTACAGGGTTCCCAGGTGAGGCCCAGAGAGTGACAGGAACGTGTGGGTGTTGGCAGTGTTaGGCAGGGCGTGGAACACGT +
Preference number: 4 (lower is better)
Translates to: CCCCTGFPGEAQRVTGTCGCWQC*AGRGTR
Trigger: ACGTGTTCCACGCCCTGCCCAACACTGCCAACACCC...ACACGTTCCTGTCACTCTCTGGGCCTCACCTGGGAACCCTGTACAACAACAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp GACCCGGATTTCTTCAGTTTCTGCATGAGCCATAAGCCTGTACTAACCAGGGTGCAAGCGTTCGGCTGCTaGCCATCGGTGCCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: DPDFFSFCMSHKPVLTRVQAFGC*PSVPQP
Trigger: TGGCTGGGGCACCGATGGTCAGCAGCCGAACGCTTG...CACCCTGGTTAGTACAGGCTTATGGCTCATGCAGAAACTGAAGAAATCCGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp GTTGAGGTAATACCGGAACCGGGGCCGTGTGAGGACCGATCGGATGATGATGTTCTGGGATGTCCCGCATaGTCACCAGGAAGTGGAGAC +
Preference number: 4 (lower is better)
Translates to: VEVIPEPGPCEDRSDDDVLGCPA*SPGSGD
Trigger: GTCTCCACTTCCTGGTGATCATGCGGGACATCCCAG...AACATCATCATCCGATCGGTCCTCACACGGCCCCGGTTCCGGTATTACCTCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp CGGCTCGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACACGTTGTAGCTCTGAGCACAGCTaGGAAAGTGTTTCTTCAACA +
Preference number: 4 (lower is better)
Translates to: RLGRSGCWQCWAGRGTRCSSEHS*ESVSST
Trigger: TGTTGAAGAAACACTTTCTCAGCTGTGCTCAGAGCT...ACAACGTGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCGAGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp GTTGAGGTAATACCGGAACCGGGGCCGTGTGAGGACCGATCGGATGATGATGTTTCATCATGTGGGACGTaGGCCAGGCCAGATCCTTGC +
Preference number: 4 (lower is better)
Translates to: VEVIPEPGPCEDRSDDDVSSCGT*ARPDPC
Trigger: GCAAGGATCTGGCCTGGCTCACGTCCCACATGATGA...AACATCATCATCCGATCGGTCCTCACACGGCCCCGGTTCCGGTATTACCTCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp TGTACTAACCAGGGTGCTGTTGTTGTACAGGGTTCCCAGGTGAGGCCCAGAGAGCTTGGGAGTGCAGAGTaGCTGTGTCCAGGAACTGGG +
Preference number: 4 (lower is better)
Translates to: CTNQGAVVVQGSQVRPRELGSAE*LCPGTG
Trigger: CCCAGTTCCTGGACACAGTCACTCTGCACTCCCAAG...CTCTCTGGGCCTCACCTGGGAACCCTGTACAACAACAGCACCCTGGTTAGTACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp TCAGCATTATCCCTGAAGGTCAGCTGCAGTAGAGACCCGGATTTCTTCAGTTTCCCTGCTTCGGGCCTCTaGCCAGGCGACGGAGCTTGG +
Preference number: 4 (lower is better)
Translates to: SALSLKVSCSRDPDFFSFPASGL*PGDGAW
Trigger: CCAAGCTCCGTCGCCTGGTCAGAGGCCCGAAGCAGG...GAAACTGAAGAAATCCGGGTCTCTACTGCAGCTGACCTTCAGGGATAATGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp TGCTGTTGTTGTACAGGGTTCCCAGGTGAGGCCCAGAGAGTGACAGGAACGTGTCCTCCTCTGGGCTACTaGTGTGGGGAGCAGATACAG +
Preference number: 4 (lower is better)
Translates to: CCCCTGFPGEAQRVTGTCPPLGY*CGEQIQ
Trigger: CTGTATCTGCTCCCCACATCAGTAGCCCAGAGGAGG...ACACGTTCCTGTCACTCTCTGGGCCTCACCTGGGAACCCTGTACAACAACAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp GAGGGCATGTCTTCGAACAAACGGGTGCAAGACTTCCCGATCACTGGGCAACTCCCTCCTCTGGGCTACTaGTGTGGGGAGCAGATACAG +
Preference number: 4 (lower is better)
Translates to: EGMSSNKRVQDFPITGQLPPLGY*CGEQIQ
Trigger: CTGTATCTGCTCCCCACATCAGTAGCCCAGAGGAGG...GAGTTGCCCAGTGATCGGGAAGTCTTGCACCCGTTTGTTCGAAGACATGCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR TCA 90 bp ATACCGGAACCGGGGCCGTGTGAGGACCGATCGGATGATGATGTTGCCAAGAGAGTGAGGCCCAGAGAGTaGCAGGAACGTGTGGAGTTT +
Preference number: 4 (lower is better)
Translates to: IPEPGPCEDRSDDDVAKRVRPRE*QERVEF
Trigger: AAACTCCACACGTTCCTGTCACTCTCTGGGCCTCAC...TCTCTTGGCAACATCATCATCCGATCGGTCCTCACACGGCCCCGGTTCCGGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR GCA 90 bp TGGCTGAATGAAATGGCACATAACGGTCTTGGGGAGAAGCAACCAGCACGACGTCCCGGCTGTGCACGGTaGTGTCATGGACACAGGCTG +
Preference number: 4 (lower is better)
Translates to: WLNEMAHNGLGEKQPARRPGCAR*CHGHRL
Trigger: CAGCCTGTGTCCATGACAGCACCGTGCACAGCCGGG...ACGTCGTGCTGGTTGCTTCTCCCCAAGACCGTTATGTGCCATTTCATTCAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR GCA 90 bp TGTACTAACCAGGGTGCTGTTGTTGTACAGGGTTCCCAGGTGAGGCCCAGAGAGCTGATCAATGGCTGCTaGAGAGCCACCAGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: CTNQGAVVVQGSQVRPRELINGC*RATRAA
Trigger: TGCTGCCCTGGTGGCTCTGCAGCAGCCATTGATCAG...CTCTCTGGGCCTCACCTGGGAACCCTGTACAACAACAGCACCCTGGTTAGTACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR GCA 90 bp TTGTCCGGTGTCTGGGCCACCTTTACCAAGCCAGGAGCCTCTTCCTGGACGAGTCTGAGGAAGTCGGCTTaGAGTACCCAGCTCCAAAGA +
Preference number: 4 (lower is better)
Translates to: LSGVWATFTKPGASSWTSLRKSA*STQLQR
Trigger: TCTTTGGAGCTGGGTACTGCAAGCCGACTTCCTCAG...ACTCGTCCAGGAAGAGGCTCCTGGCTTGGTAAAGGTGGCCCAGACACCGGACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR GCA 90 bp CCGTGTGAGGACCGATCGGATGATGATGTTGCCAAGAGAATGGCCAATGAAGCTGATGTCCAGGCACTCTaGAGGCAGCGGGGGCATGCT +
Preference number: 4 (lower is better)
Translates to: PCEDRSDDDVAKRMANEADVQAL*RQRGHA
Trigger: AGCATGCCCCCGCTGCCTGCAGAGTGCCTGGACATC...AGCTTCATTGGCCATTCTCTTGGCAACATCATCATCCGATCGGTCCTCACACGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR GCA 90 bp CGGATTAAAGTGCAGTCCTTGGCTTCAACCAGAGGGCCCAGGAGGTTGTTGATCTACCAGCCGGAGGTCTaGACTGTTCCCATCCAGGCC +
Preference number: 4 (lower is better)
Translates to: RIKVQSLASTRGPRRLLIYQPEV*TVPIQA
Trigger: GGCCTGGATGGGAACAGTGCAGACCTCCGGCTGGTA...GATCAACAACCTCCTGGGCCCTCTGGTTGAAGCCAAGGACTGCACTTTAATCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp CTTCATTCCGGTATAAGATCTGAAAGACCCGGCTGTGCACGGTGCTGTCATGGAATGACCGGGACCTGGTaGTGCAGACCATTCCGGGGG +
Preference number: 4 (lower is better)
Translates to: LHSGIRSERPGCARCCHGMTGTW*CRPFRG
Trigger: CCCCCGGAATGGTCTGCACCACCAGGTCCCGGTCAT...TCCATGACAGCACCGTGCACAGCCGGGTCTTTCAGATCTTATACCGGAATGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR CCA 90 bp CGGCTCGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACACGTTGTCCATATGATTTTGTGTaGCCACATTCTCACCTGGCT +
Preference number: 4 (lower is better)
Translates to: RLGRSGCWQCWAGRGTRCPYDFV*PHSHLA
Trigger: AGCCAGGTGAGAATGTGGCCACACAAAATCATATGG...ACAACGTGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCGAGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp TGTGAGCGGCTCGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACACCAGCATCAGATGTTTaGCCAGTCCAACATTCATCT +
Preference number: 4 (lower is better)
Translates to: CERLGRSGCWQCWAGRGTPASDV*PVQHSS
Trigger: AGATGAATGTTGGACTGGCCAAACATCTGATGCTGG...TGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCGAGCCGCTCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp CGGCTCGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACACGTTGTCCAGCATCAGATGTTTaGCCAGTCCAACATTCATCT +
Preference number: 4 (lower is better)
Translates to: RLGRSGCWQCWAGRGTRCPASDV*PVQHSS
Trigger: AGATGAATGTTGGACTGGCCAAACATCTGATGCTGG...ACAACGTGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCGAGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp CACTCTGCAGGCAGCGGGGGCATGCTAGTGAGGTACTCCGAGTTCCGGATATCCGATCCTGGGGAACCTTaGCTCTTGCTGTGCATATCT +
Preference number: 4 (lower is better)
Translates to: HSAGSGGMLVRYSEFRISDPGEP*LLLCIS
Trigger: AGATATGCACAGCAAGAGCCAAGGTTCCCCAGGATC...GGATATCCGGAACTCGGAGTACCTCACTAGCATGCCCCCGCTGCCTGCAGAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR TCA 90 bp CGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACACGTTGTGTCGGAGTGCAGATCCACCTTaGGTTGAAAATCTACTTCAC +
Preference number: 4 (lower is better)
Translates to: RPIRVLAVLGRAWNTLCRSADPP*VENLLH
Trigger: GTGAAGTAGATTTTCAACTCAAGGTGGATCTGCACT...CCGACACAACGTGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp TGCTGTTGTTGTACAGGGTTCCCAGGTGAGGCCCAGAGAGTGACAGGAACGTGTAGGGCTCAGAGGGGGTaGGTTTCAAGCTTAGCAGCA +
Preference number: 4 (lower is better)
Translates to: CCCCTGFPGEAQRVTGTCRAQRG*VSSLAA
Trigger: TGCTGCTAAGCTTGAAACTCACCCCCTCTGAGCCCT...ACACGTTCCTGTCACTCTCTGGGCCTCACCTGGGAACCCTGTACAACAACAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp ATTGAGAACCCTGGTCCTAGATGCGTTTCCACACTTCAGAAGGGATTTTTGCAGCCTGCTTCGGGCCTCTaGCCAGGCGACGGAGCTTGG +
Preference number: 4 (lower is better)
Translates to: IENPGPRCVSTLQKGFLQPASGL*PGDGAW
Trigger: CCAAGCTCCGTCGCCTGGTCAGAGGCCCGAAGCAGG...CTGCAAAAATCCCTTCTGAAGTGTGGAAACGCATCTAGGACCAGGGTTCTCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR TCA 90 bp ATACCGGAACCGGGGCCGTGTGAGGACCGATCGGATGATGATGTTGCCAAGAGAGGAGCCCCAGTTCTATaGAAGTCTTTACCAGCCGGA +
Preference number: 4 (lower is better)
Translates to: IPEPGPCEDRSDDDVAKRGAPVL*KSLPAG
Trigger: TCCGGCTGGTAAAGACTTTCATAGAACTGGGGCTCC...TCTCTTGGCAACATCATCATCCGATCGGTCCTCACACGGCCCCGGTTCCGGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp TCAGTGCCCCCTTCTGCTAGGTTAGTCTCACTCAGTGTTCCCTACTACAGACAACGCCGCCGCCGGTGCTaGTGCGGTTGCTATGGTTAT +
Preference number: 4 (lower is better)
Translates to: SVPPSARLVSLSVPYYRQRRRRC*CGCYGY
Trigger: ATAACCATAGCAACCGCATCAGCACCGGCGGCGGCG...TTGTCTGTAGTAGGGAACACTGAGTGAGACTAACCTAGCAGAAGGGGGCACTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR GCA 90 bp CGGATTAAAGTGCAGTCCTTGGCTTCAACCAGAGGGCCCAGGAGGTTGTTGATCAGGCTGAATGCAGGCTaGTGCTCTCTGTCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: RIKVQSLASTRGPRRLLIRLNAG*CSLSAQ
Trigger: CTGGGCAGACAGAGAGCAGCAGCCTGCATTCAGCCT...GATCAACAACCTCCTGGGCCCTCTGGTTGAAGCCAAGGACTGCACTTTAATCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR GCA 90 bp GTTGAGGTAATACCGGAACCGGGGCCGTGTGAGGACCGATCGGATGATGATGTTATTACCTGTCTCCACTaGAGGGCTCCCCTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: VEVIPEPGPCEDRSDDDVITCLH*RAPLSL
Trigger: GAGAGAGAGGGGAGCCCTGCAGTGGAGACAGGTAAT...AACATCATCATCCGATCGGTCCTCACACGGCCCCGGTTCCGGTATTACCTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276737.10
CDS-3UTR GCA 90 bp CTGCTTCCCTTTCCCTTTGGGGATGTCTATGTATCCGGGGCCCTGCTGGTTGTCCACTTGTGTGCGTGCTaGATGCAGTTCTCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: LLPFPFGDVYVSGALLVVHLCAC*MQFSEV
Trigger: CACCTCTGAGAACTGCATGCAGCACGCACACAAGTG...GACAACCAGCAGGGCCCCGGATACATAGACATCCCCAAAGGGAAAGGGAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR GCA 90 bp CGTGTGAGGACCGATCGGATGATGATGTTGCCAAGAGAATGGCCAATGAAGCTAGCAACTCCAGAGCCCTaGTTCGGGCCTCTGACCAGG +
Preference number: 4 (lower is better)
Translates to: RVRTDRMMMLPREWPMKLATPEP*FGPLTR
Trigger: CCTGGTCAGAGGCCCGAAGCAGGGCTCTGGAGTTGC...TAGCTTCATTGGCCATTCTCTTGGCAACATCATCATCCGATCGGTCCTCACACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR GCA 90 bp TTGTCCGGTGTCTGGGCCACCTTTACCAAGCCAGGAGCCTCTTCCTGGACGAGTCAGAGTAAAGGTCTCTaGAGAAGTCAGATGGGACCC +
Preference number: 4 (lower is better)
Translates to: LSGVWATFTKPGASSWTSQSKGL*RSQMGP
Trigger: GGGTCCCATCTGACTTCTGCAGAGACCTTTACTCTG...ACTCGTCCAGGAAGAGGCTCCTGGCTTGGTAAAGGTGGCCCAGACACCGGACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR CCA 90 bp TGGCTGAATGAAATGGCACATAACGGTCTTGGGGAGAAGCAACCAGCACGACGTCTGTCTGCCCAGCGATaGAGGCACTCAGTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: WLNEMAHNGLGEKQPARRLSAQR*RHSVCG
Trigger: CCCACAGACTGAGTGCCTCCATCGCTGGGCAGACAG...ACGTCGTGCTGGTTGCTTCTCCCCAAGACCGTTATGTGCCATTTCATTCAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp AAAGTGCAGTCCTTGGCTTCAACCAGAGGGCCCAGGAGGTTGTTGATCATTTCTATGACCGGGACCTGGTaGTGCAGACCATTCCGGGGG +
Preference number: 4 (lower is better)
Translates to: KVQSLASTRGPRRLLIISMTGTW*CRPFRG
Trigger: CCCCCGGAATGGTCTGCACCACCAGGTCCCGGTCAT...AGAAATGATCAACAACCTCCTGGGCCCTCTGGTTGAAGCCAAGGACTGCACTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp AAAGTGCAGTCCTTGGCTTCAACCAGAGGGCCCAGGAGGTTGTTGATCATTTCTCTCCAGCTCCGTGTGTaGCAGCTCTGGGATGTCCCG +
Preference number: 4 (lower is better)
Translates to: KVQSLASTRGPRRLLIISLQLRV*QLWDVP
Trigger: CGGGACATCCCAGAGCTGCCACACACGGAGCTGGAG...AGAAATGATCAACAACCTCCTGGGCCCTCTGGTTGAAGCCAAGGACTGCACTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp TCCAGGAACTGGGTCCACAGAGTCATCATGTGGGACGTGAGCCAGGCCAGATCCACTGTGTCCAGGAACTaGGTCCACAGAGTCATCATG +
Preference number: 4 (lower is better)
Translates to: SRNWVHRVIMWDVSQARSTVSRN*VHRVIM
Trigger: CATGATGACTCTGTGGACCCAGTTCCTGGACACAGT...GGATCTGGCCTGGCTCACGTCCCACATGATGACTCTGTGGACCCAGTTCCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR CCA 90 bp ATACCGGAACCGGGGCCGTGTGAGGACCGATCGGATGATGATGTTGCCAAGAGAGAGGTGAGAGAAGCCTaGATGCCGCTTGGCAAACTT +
Preference number: 4 (lower is better)
Translates to: IPEPGPCEDRSDDDVAKREVREA*MPLGKL
Trigger: AAGTTTGCCAAGCGGCATCCAGGCTTCTCTCACCTC...TCTCTTGGCAACATCATCATCCGATCGGTCCTCACACGGCCCCGGTTCCGGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp CTGCTTCCCTTTCCCTTTGGGGATGTCTATGTATCCGGGGCCCTGCTGGTTGTCATCTCCACCAGGGGATaGTCTGCTCCAGCATCTGTT +
Preference number: 4 (lower is better)
Translates to: LLPFPFGDVYVSGALLVVISTRG*SAPASV
Trigger: AACAGATGCTGGAGCAGACCATCCCCTGGTGGAGAT...GACAACCAGCAGGGCCCCGGATACATAGACATCCCCAAAGGGAAAGGGAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR CCA 90 bp CTGCTTCCCTTTCCCTTTGGGGATGTCTATGTATCCGGGGCCCTGCTGGTTGTCCCGCTTTGGCTTTGCTaGCCTGTTGAGTTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: LLPFPFGDVYVSGALLVVPLWLC*PVEFLL
Trigger: CAACAGGAACTCAACAGGCCAGCAAAGCCAAAGCGG...GACAACCAGCAGGGCCCCGGATACATAGACATCCCCAAAGGGAAAGGGAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR CCA 90 bp ATACCGGAACCGGGGCCGTGTGAGGACCGATCGGATGATGATGTTGCCAAGAGACAAGGTGAACCGCTTTaGCTTTGCTGGCCTGTTGAG +
Preference number: 4 (lower is better)
Translates to: IPEPGPCEDRSDDDVAKRQGEPL*LCWPVE
Trigger: CTCAACAGGCCAGCAAAGCCAAAGCGGTTCACCTTG...TCTCTTGGCAACATCATCATCCGATCGGTCCTCACACGGCCCCGGTTCCGGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp CGTGTGAGGACCGATCGGATGATGATGTTGCCAAGAGAATGGCCAATGAAGCTAGGCCGATCAGGGTGTTaGCAGTGTTGGGCAGGGCGT +
Preference number: 4 (lower is better)
Translates to: RVRTDRMMMLPREWPMKLGRSGC*QCWAGR
Trigger: ACGCCCTGCCCAACACTGCCAACACCCTGATCGGCC...TAGCTTCATTGGCCATTCTCTTGGCAACATCATCATCCGATCGGTCCTCACACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
3UTR CAA 72 bp AGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACACGTaGTGTCGGATTAAAGTGCAGTCCTTGGCTTCAACC +
Preference number: 4 (lower is better)
Translates to: RVLAVLGRAWNT*CRIKVQSLAST
Trigger: GGTTGAAGCCAAGGACTGCACTTTAATCCGACACAACGTGTTCCACGCCCTGCCCAACACTGCCAACACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
3UTR CAA 72 bp GCCCAGCGATGGAGGCACTCAGTCTGTGGGGGATCCTaGAAGACACCTTCAAGGTCACTCGGATCTGGTAAT +
Preference number: 4 (lower is better)
Translates to: AQRWRHSVCGGS*KTPSRSLGSGN
Trigger: ATTACCAGATCCGAGTGACCTTGAAGGTGTCTTCAAGGATCCCCCACAGACTGAGTGCCTCCATCGCTGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR TCA 90 bp GTGAGCGGCTCGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACACCTTGTATTTCAGACATaGTCTTTTTGGCTCATTACC +
Preference number: 4 (lower is better)
Translates to: VSGSADQGVGSVGQGVEHLVFQT*SFWLIT
Trigger: GGTAATGAGCCAAAAAGATCATGTCTGAAATACAAG...GTGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCGAGCCGCTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp TGTACTAACCAGGGTGCTGTTGTTGTACAGGGTTCCCAGGTGAGGCCCAGAGAGTTCCGGTATAAGATCTaGAAGACCCGGCTGTGCACG +
Preference number: 4 (lower is better)
Translates to: CTNQGAVVVQGSQVRPREFRYKI*KTRLCT
Trigger: CGTGCACAGCCGGGTCTTTCAGATCTTATACCGGAA...CTCTCTGGGCCTCACCTGGGAACCCTGTACAACAACAGCACCCTGGTTAGTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp CTTCCCCCAGCATTAACTACCTGTGGTTTCCTTTTACCTAATTCGGGATATGGACCTGCTTCGGGCCTCTaGCCAGGCGACGGAGCTTGG +
Preference number: 4 (lower is better)
Translates to: LPPALTTCGFLLPNSGYGPASGL*PGDGAW
Trigger: CCAAGCTCCGTCGCCTGGTCAGAGGCCCGAAGCAGG...TCCATATCCCGAATTAGGTAAAAGGAAACCACAGGTAGTTAATGCTGGGGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR TCA 90 bp TGTACTAACCAGGGTGCTGTTGTTGTACAGGGTTCCCAGGTGAGGCCCAGAGAGCTGTTGAGTTCCTGTTaGTGGCATCAGCAGCTGACG +
Preference number: 4 (lower is better)
Translates to: CTNQGAVVVQGSQVRPRELLSSC*WHQQLT
Trigger: CGTCAGCTGCTGATGCCATCAACAGGAACTCAACAG...CTCTCTGGGCCTCACCTGGGAACCCTGTACAACAACAGCACCCTGGTTAGTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp TCCAGGAACTGGGTCCACAGAGTCATCATGTGGGACGTGAGCCAGGCCAGATCCATCCATAATGCAAGGTaGACCGCTTTGGCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: SRNWVHRVIMWDVSQARSIHNAR*TALALL
Trigger: CAGCAAAGCCAAAGCGGTTCACCTTGCATTATGGAT...GGATCTGGCCTGGCTCACGTCCCACATGATGACTCTGTGGACCCAGTTCCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR TCA 90 bp CGGATTAAAGTGCAGTCCTTGGCTTCAACCAGAGGGCCCAGGAGGTTGTTGATCTCAGATGGGACCCCATaGTGGAAGTGCCTGCCTTCA +
Preference number: 4 (lower is better)
Translates to: RIKVQSLASTRGPRRLLISDGTP*WKCLPS
Trigger: TGAAGGCAGGCACTTCCATCATGGGGTCCCATCTGA...GATCAACAACCTCCTGGGCCCTCTGGTTGAAGCCAAGGACTGCACTTTAATCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp TGTGAGCGGCTCGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACAGCAAATGTGTCCATCTaGTTCTTTTCAGACATTAGG +
Preference number: 4 (lower is better)
Translates to: CERLGRSGCWQCWAGRGTANVSI*FFSDIR
Trigger: CCTAATGTCTGAAAAGAATCAGATGGACACATTTGC...TGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCGAGCCGCTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp GACCCGGATTTCTTCAGTTTCTGCATGAGCCATAAGCCTGTACTAACCAGGGTGTACAGGGTTCCCAGGTaGGGCCCAGAGAGTGACAGG +
Preference number: 4 (lower is better)
Translates to: DPDFFSFCMSHKPVLTRVYRVPR*GPESDR
Trigger: CCTGTCACTCTCTGGGCCTCACCTGGGAACCCTGTA...CACCCTGGTTAGTACAGGCTTATGGCTCATGCAGAAACTGAAGAAATCCGGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR GCA 90 bp CCCCCTTCTGCTAGGTTAGTCTCACTCAGTGTTCCCTACTACAGACAAAGATGTCCCGGCTGTGCACGGTaGTGTCATGGACACAGGCTG +
Preference number: 4 (lower is better)
Translates to: PPSARLVSLSVPYYRQRCPGCAR*CHGHRL
Trigger: CAGCCTGTGTCCATGACAGCACCGTGCACAGCCGGG...ACATCTTTGTCTGTAGTAGGGAACACTGAGTGAGACTAACCTAGCAGAAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR GCA 90 bp CCCCCTTCTGCTAGGTTAGTCTCACTCAGTGTTCCCTACTACAGACAAAGATGTGCAACTCCAGAGCCCTaGTTCGGGCCTCTGACCAGG +
Preference number: 4 (lower is better)
Translates to: PPSARLVSLSVPYYRQRCATPEP*FGPLTR
Trigger: CCTGGTCAGAGGCCCGAAGCAGGGCTCTGGAGTTGC...ACATCTTTGTCTGTAGTAGGGAACACTGAGTGAGACTAACCTAGCAGAAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR GCA 90 bp AGGACCGATCGGATGATGATGTTGCCAAGAGAATGGCCAATGAAGCTAATTCGGGCAACTCCAGAGCCCTaGTTCGGGCCTCTGACCAGG +
Preference number: 4 (lower is better)
Translates to: RTDRMMMLPREWPMKLIRATPEP*FGPLTR
Trigger: CCTGGTCAGAGGCCCGAAGCAGGGCTCTGGAGTTGC...CCGAATTAGCTTCATTGGCCATTCTCTTGGCAACATCATCATCCGATCGGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR GCA 90 bp AAGCGTGGAGGAGCAACAGGCACAGGTCTCGGTGCCACTTGTGTGCGTGCTGCACCTGGGGTTTTCAAGTaGTATGACGCGTGGTATTTT +
Preference number: 4 (lower is better)
Translates to: KRGGATGTGLGATCVRAAPGVFK*YDAWYF
Trigger: AAAATACCACGCGTCATAGCACTTGAAAACCCCAGG...TGCAGCACGCACACAAGTGGCACCGAGACCTGTGCCTGTTGCTCCTCCACGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR GCA 90 bp TGTACTAACCAGGGTGCTGTTGTTGTACAGGGTTCCCAGGTGAGGCCCAGAGAGGAACCGCTTTGGCTTTaGTGGCCTGTTGAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: CTNQGAVVVQGSQVRPREEPLWL*WPVEFL
Trigger: CAGGAACTCAACAGGCCAGCAAAGCCAAAGCGGTTC...CTCTCTGGGCCTCACCTGGGAACCCTGTACAACAACAGCACCCTGGTTAGTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR GCA 90 bp GTTGAGGTAATACCGGAACCGGGGCCGTGTGAGGACCGATCGGATGATGATGTTGAACCGCTTTGGCTTTaGTGGCCTGTTGAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: VEVIPEPGPCEDRSDDDVEPLWL*WPVEFL
Trigger: CAGGAACTCAACAGGCCAGCAAAGCCAAAGCGGTTC...AACATCATCATCCGATCGGTCCTCACACGGCCCCGGTTCCGGTATTACCTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR GCA 90 bp TCCAGGAACTGGGTCCACAGAGTCATCATGTGGGACGTGAGCCAGGCCAGATCCGGAGACAGGTGGCAGTaGAAGACACAGATAAGTTCA +
Preference number: 4 (lower is better)
Translates to: SRNWVHRVIMWDVSQARSGDRWQ*KTQISS
Trigger: TGAACTTATCTGTGTCTTGCACTGCCACCTGTCTCC...GGATCTGGCCTGGCTCACGTCCCACATGATGACTCTGTGGACCCAGTTCCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR GCA 90 bp CGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACACGTTGTGTCGGGATTTCTTCAGTTTCTaGATGAGCCATAAGCCTGTA +
Preference number: 4 (lower is better)
Translates to: RPIRVLAVLGRAWNTLCRDFFSF*MSHKPV
Trigger: TACAGGCTTATGGCTCATGCAGAAACTGAAGAAATC...CCGACACAACGTGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp TGCTGTTGTTGTACAGGGTTCCCAGGTGAGGCCCAGAGAGTGACAGGAACGTGTTTCTTGTCCGGTGTCTaGGCCACCTTTACCAAGCCA +
Preference number: 4 (lower is better)
Translates to: CCCCTGFPGEAQRVTGTCFLSGV*ATFTKP
Trigger: TGGCTTGGTAAAGGTGGCCCAGACACCGGACAAGAA...ACACGTTCCTGTCACTCTCTGGGCCTCACCTGGGAACCCTGTACAACAACAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp CCCCCTTCTGCTAGGTTAGTCTCACTCAGTGTTCCCTACTACAGACAAAGATGTCTCCAGCTCCGTGTGTaGCAGCTCTGGGATGTCCCG +
Preference number: 4 (lower is better)
Translates to: PPSARLVSLSVPYYRQRCLQLRV*QLWDVP
Trigger: CGGGACATCCCAGAGCTGCCACACACGGAGCTGGAG...ACATCTTTGTCTGTAGTAGGGAACACTGAGTGAGACTAACCTAGCAGAAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp GTTGAGGTAATACCGGAACCGGGGCCGTGTGAGGACCGATCGGATGATGATGTTCTCCATCTTGCTGCTTaGTGTCCGCATCTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: VEVIPEPGPCEDRSDDDVLHLAA*CPHLQQ
Trigger: CTGCTGAAGATGCGGACACCAAGCAGCAAGATGGAG...AACATCATCATCCGATCGGTCCTCACACGGCCCCGGTTCCGGTATTACCTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp TGCTGTTGTTGTACAGGGTTCCCAGGTGAGGCCCAGAGAGTGACAGGAACGTGTCTCCATCTTGCTGCTTaGTGTCCGCATCTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: CCCCTGFPGEAQRVTGTCLHLAA*CPHLQQ
Trigger: CTGCTGAAGATGCGGACACCAAGCAGCAAGATGGAG...ACACGTTCCTGTCACTCTCTGGGCCTCACCTGGGAACCCTGTACAACAACAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp TCAGTGCCCCCTTCTGCTAGGTTAGTCTCACTCAGTGTTCCCTACTACAGACAAGGGTGTTGGCAGTGTTaGGCAGGGCGTGGAACACGT +
Preference number: 4 (lower is better)
Translates to: SVPPSARLVSLSVPYYRQGCWQC*AGRGTR
Trigger: ACGTGTTCCACGCCCTGCCCAACACTGCCAACACCC...TTGTCTGTAGTAGGGAACACTGAGTGAGACTAACCTAGCAGAAGGGGGCACTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
3UTR CAA 72 bp GCGTGGAACACGTTGTGTCGGATTAAAGTGCAGTCCTaGGCTTCAACCAGAGGGCCCAGGAGGTTGTTGATC +
Preference number: 4 (lower is better)
Translates to: AWNTLCRIKVQS*ASTRGPRRLLI
Trigger: GATCAACAACCTCCTGGGCCCTCTGGTTGAAGCCAAGGACTGCACTTTAATCCGACACAACGTGTTCCACGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
3UTR CAA 72 bp TCCTCTGGGCTACTGATGTGGGGAGCAGATACAGACTaGGTTAACTTAGTGAGTGCCACCTCCCGCTCATCC +
Preference number: 4 (lower is better)
Translates to: SSGLLMWGADTD*VNLVSATSRSS
Trigger: GGATGAGCGGGAGGTGGCACTCACTAAGTTAACCAAGTCTGTATCTGCTCCCCACATCAGTAGCCCAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR TCA 90 bp AAAGTGCAGTCCTTGGCTTCAACCAGAGGGCCCAGGAGGTTGTTGATCATTTCTGTCATGGACACAGGCTaGATGCAGGCTGCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: KVQSLASTRGPRRLLIISVMDTG*MQAAAL
Trigger: GAGAGCAGCAGCCTGCATTCAGCCTGTGTCCATGAC...AGAAATGATCAACAACCTCCTGGGCCCTCTGGTTGAAGCCAAGGACTGCACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp GACCCGGATTTCTTCAGTTTCTGCATGAGCCATAAGCCTGTACTAACCAGGGTGGTCATGGACACAGGCTaGATGCAGGCTGCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: DPDFFSFCMSHKPVLTRVVMDTG*MQAAAL
Trigger: GAGAGCAGCAGCCTGCATTCAGCCTGTGTCCATGAC...CACCCTGGTTAGTACAGGCTTATGGCTCATGCAGAAACTGAAGAAATCCGGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp GTTGAGGTAATACCGGAACCGGGGCCGTGTGAGGACCGATCGGATGATGATGTTTGCAGTTCTCAGAGGTaGTGTAGAAGCTTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: VEVIPEPGPCEDRSDDDVCSSQR*CRSFPL
Trigger: CAGAGGGAAGCTTCTACATCACCTCTGAGAACTGCA...AACATCATCATCCGATCGGTCCTCACACGGCCCCGGTTCCGGTATTACCTCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp TGCTGTTGTTGTACAGGGTTCCCAGGTGAGGCCCAGAGAGTGACAGGAACGTGTTCCTGCTCTTCTGTGTaGGAGTCCTTTAGGGAAGAC +
Preference number: 4 (lower is better)
Translates to: CCCCTGFPGEAQRVTGTCSCSSV*ESFRED
Trigger: GTCTTCCCTAAAGGACTCTCACACAGAAGAGCAGGA...ACACGTTCCTGTCACTCTCTGGGCCTCACCTGGGAACCCTGTACAACAACAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp TGGAGGCACTCAGTCTGTGGGGGATCCTTGAAGACACCTTCAAGGTCACTCGGATCCTGCTCTTCTGTGTaGGAGTCCTTTAGGGAAGAC +
Preference number: 4 (lower is better)
Translates to: WRHSVCGGSLKTPSRSLGSCSSV*ESFRED
Trigger: GTCTTCCCTAAAGGACTCTCACACAGAAGAGCAGGA...TCCGAGTGACCTTGAAGGTGTCTTCAAGGATCCCCCACAGACTGAGTGCCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR TCA 90 bp CGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACACGTTGTGTCGGGGTTTTCAAGTGCTATaGCGCGTGGTATTTTTAAAT +
Preference number: 4 (lower is better)
Translates to: RPIRVLAVLGRAWNTLCRGFQVL*RVVFLN
Trigger: ATTTAAAAATACCACGCGTCATAGCACTTGAAAACC...CCGACACAACGTGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp TCAGTGCCCCCTTCTGCTAGGTTAGTCTCACTCAGTGTTCCCTACTACAGACAACTCCTTGGGCACAGATaGGAAAGGGAGACAGGTGGC +
Preference number: 4 (lower is better)
Translates to: SVPPSARLVSLSVPYYRQLLGHR*ERETGG
Trigger: GCCACCTGTCTCCCTTTCTCATCTGTGCCCAAGGAG...TTGTCTGTAGTAGGGAACACTGAGTGAGACTAACCTAGCAGAAGGGGGCACTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR TCA 90 bp CGGATTAAAGTGCAGTCCTTGGCTTCAACCAGAGGGCCCAGGAGGTTGTTGATCCCAAAGGCTGATGGGTaGTGGGAAACAGGGTCTGTT +
Preference number: 4 (lower is better)
Translates to: RIKVQSLASTRGPRRLLIPKADG*WETGSV
Trigger: AACAGACCCTGTTTCCCATCACCCATCAGCCTTTGG...GATCAACAACCTCCTGGGCCCTCTGGTTGAAGCCAAGGACTGCACTTTAATCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR GCA 90 bp TCGGATGATGATGTTGCCAAGAGAATGGCCAATGAAGCTAATTCGGGATATGGAACCGGGACCTGGTGGTaGAGACCATTCCGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: SDDDVAKRMANEANSGYGTGTWW*RPFRGW
Trigger: CCACCCCCGGAATGGTCTGCACCACCAGGTCCCGGT...TCCATATCCCGAATTAGCTTCATTGGCCATTCTCTTGGCAACATCATCATCCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR GCA 90 bp GTTGAGGTAATACCGGAACCGGGGCCGTGTGAGGACCGATCGGATGATGATGTTATGTATCCGGGGCCCTaGTGGTTGTCAGCATCTAAA +
Preference number: 4 (lower is better)
Translates to: VEVIPEPGPCEDRSDDDVMYPGP*WLSASK
Trigger: TTTAGATGCTGACAACCAGCAGGGCCCCGGATACAT...AACATCATCATCCGATCGGTCCTCACACGGCCCCGGTTCCGGTATTACCTCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR GCA 90 bp CTGCTTCCCTTTCCCTTTGGGGATGTCTATGTATCCGGGGCCCTGCTGGTTGTCCCTCAACCTCTGAGATaGCACTGTTGGAAAGAGCTT +
Preference number: 4 (lower is better)
Translates to: LLPFPFGDVYVSGALLVVPQPLR*HCWKEL
Trigger: AAGCTCTTTCCAACAGTGGCATCTCAGAGGTTGAGG...GACAACCAGCAGGGCCCCGGATACATAGACATCCCCAAAGGGAAAGGGAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR GCA 90 bp TGGCTGAATGAAATGGCACATAACGGTCTTGGGGAGAAGCAACCAGCACGACGTGGGGCACACAGTGCCTaGTTTATGTTTAGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: WLNEMAHNGLGEKQPARRGAHSA*FMFSLR
Trigger: CCGGAGGCTAAACATAAAGCAGGCACTGTGTGCCCC...ACGTCGTGCTGGTTGCTTCTCCCCAAGACCGTTATGTGCCATTTCATTCAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR GCA 90 bp AGATGTACTTTCTACACAATTATAATAGATGCTCAGAGGCCAGAGAGGGTTTACTCTCCGTGCAACAGCTaGCCGGCCGCGGCCTCCGGG +
Preference number: 4 (lower is better)
Translates to: RCTFYTIIIDAQRPERVYSPCNS*PAAASG
Trigger: CCCGGAGGCCGCGGCCGGGCAGCTGTTGCACGGAGA...GTAAACCCTCTCTGGCCTCTGAGCATCTATTATAATTGTGTAGAAAGTACATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp GTGAGGACCGATCGGATGATGATGTTGCCAAGAGAATGGCCAATGAAGCTAATTCTCTTTCGCCGTCTCTaGCCGCCAACAGTTGCGGCG +
Preference number: 4 (lower is better)
Translates to: VRTDRMMMLPREWPMKLILFRRL*PPTVAA
Trigger: CGCCGCAACTGTTGGCGGCCAGAGACGGCGAAAGAG...AATTAGCTTCATTGGCCATTCTCTTGGCAACATCATCATCCGATCGGTCCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276737.10
CDS-3UTR CCA 90 bp GTCTGTAAAAGCAGGTCTCAGCTAAAGCTCTCCACCGATCGTAAGCATTACCAACTCTTTCGCCGTCTCTaGCCGCCAACAGTTGCGGCG +
Preference number: 4 (lower is better)
Translates to: VCKSRSQLKLSTDRKHYQLFRRL*PPTVAA
Trigger: CGCCGCAACTGTTGGCGGCCAGAGACGGCGAAAGAG...TTGGTAATGCTTACGATCGGTGGAGAGCTTTAGCTGAGACCTGCTTTTACAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp GACCCGGATTTCTTCAGTTTCTGCATGAGCCATAAGCCTGTACTAACCAGGGTGAACATGACCGGGACCTaGTGGTGCAGACCATTCCGG +
Preference number: 4 (lower is better)
Translates to: DPDFFSFCMSHKPVLTRVNMTGT*WCRPFR
Trigger: CCGGAATGGTCTGCACCACCAGGTCCCGGTCATGTT...CACCCTGGTTAGTACAGGCTTATGGCTCATGCAGAAACTGAAGAAATCCGGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp TTGTGTCGGATTAAAGTGCAGTCCTTGGCTTCAACCAGAGGGCCCAGGAGGTTGTTCTTGTCCGGTGTCTaGGCCACCTTTACCAAGCCA +
Preference number: 4 (lower is better)
Translates to: LCRIKVQSLASTRGPRRLFLSGV*ATFTKP
Trigger: TGGCTTGGTAAAGGTGGCCCAGACACCGGACAAGAA...CAACCTCCTGGGCCCTCTGGTTGAAGCCAAGGACTGCACTTTAATCCGACACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp ATACCGGAACCGGGGCCGTGTGAGGACCGATCGGATGATGATGTTGCCAAGAGATCCATCCTCTGGACCTaGACTCCTTCTAGAAGTATC +
Preference number: 4 (lower is better)
Translates to: IPEPGPCEDRSDDDVAKRSILWT*TPSRSI
Trigger: GATACTTCTAGAAGGAGTCCAGGTCCAGAGGATGGA...TCTCTTGGCAACATCATCATCCGATCGGTCCTCACACGGCCCCGGTTCCGGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp ATACCGGAACCGGGGCCGTGTGAGGACCGATCGGATGATGATGTTGCCAAGAGAGAAGAGATGGCATTTTaGTGGCTTCCACCTACTACC +
Preference number: 4 (lower is better)
Translates to: IPEPGPCEDRSDDDVAKREEMAF*WLPPTT
Trigger: GGTAGTAGGTGGAAGCCACCAAAATGCCATCTCTTC...TCTCTTGGCAACATCATCATCCGATCGGTCCTCACACGGCCCCGGTTCCGGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp GAGGGCATGTCTTCGAACAAACGGGTGCAAGACTTCCCGATCACTGGGCAACTCTATCCGGGGCCCTGCTaGTTGTCAGCATCTAAAACT +
Preference number: 4 (lower is better)
Translates to: EGMSSNKRVQDFPITGQLYPGPC*LSASKT
Trigger: AGTTTTAGATGCTGACAACCAGCAGGGCCCCGGATA...GAGTTGCCCAGTGATCGGGAAGTCTTGCACCCGTTTGTTCGAAGACATGCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR CCA 90 bp TGTACTAACCAGGGTGCTGTTGTTGTACAGGGTTCCCAGGTGAGGCCCAGAGAGGCTTCCCTTTCCCTTTaGGGATGTCTATGTATCCGG +
Preference number: 4 (lower is better)
Translates to: CTNQGAVVVQGSQVRPREASLSL*GCLCIR
Trigger: CCGGATACATAGACATCCCCAAAGGGAAAGGGAAGC...CTCTCTGGGCCTCACCTGGGAACCCTGTACAACAACAGCACCCTGGTTAGTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp GTTGAGGTAATACCGGAACCGGGGCCGTGTGAGGACCGATCGGATGATGATGTTTTAAAGTGCAGTCCTTaGCTTCAACCAGAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: VEVIPEPGPCEDRSDDDVLKCSP*LQPEGP
Trigger: TGGGCCCTCTGGTTGAAGCCAAGGACTGCACTTTAA...AACATCATCATCCGATCGGTCCTCACACGGCCCCGGTTCCGGTATTACCTCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp ATTGAGAACCCTGGTCCTAGATGCGTTTCCACACTTCAGAAGGGATTTTTGCAGGGCCGATCAGGGTGTTaGCAGTGTTGGGCAGGGCGT +
Preference number: 4 (lower is better)
Translates to: IENPGPRCVSTLQKGFLQGRSGC*QCWAGR
Trigger: ACGCCCTGCCCAACACTGCCAACACCCTGATCGGCC...CTGCAAAAATCCCTTCTGAAGTGTGGAAACGCATCTAGGACCAGGGTTCTCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp AGATGTACTTTCTACACAATTATAATAGATGCTCAGAGGCCAGAGAGGGTTTACCCCTGCTGCTCCCGCTaGCTCCGCTCCGCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: RCTFYTIIIDAQRPERVYPCCSR*LRSAAA
Trigger: AGCGGCTGCGGAGCGGAGCCAGCGGGAGCAGCAGGG...GTAAACCCTCTCTGGCCTCTGAGCATCTATTATAATTGTGTAGAAAGTACATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp CTGTCTTACTTATCCCTACTGTCCAGGTTCATTCATCTCTTCCATACAACGAAACCTGCGAGCTGGTGTTaGGTCCCCGCGGCGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LSYLSLLSRFIHLFHTTKPASWC*VPAARL
Trigger: CAGCCTCGCCGCGGGGACCCAACACCAGCTCGCAGG...TTTCGTTGTATGGAAGAGATGAATGAACCTGGACAGTAGGGATAAGTAAGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395297.6
3UTR CAA 72 bp AACCGGGGCCGTGTGAGGACCGATCGGATGATGATGTaGCCAAGAGAATGGCCAATGAAGCTAATTCGGGAT +
Preference number: 4 (lower is better)
Translates to: NRGRVRTDRMMM*PREWPMKLIRD
Trigger: ATCCCGAATTAGCTTCATTGGCCATTCTCTTGGCAACATCATCATCCGATCGGTCCTCACACGGCCCCGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp CTCCTCCTATCTGATCTCACTTTTGTCCCTGTCGTCTATTGGTTTTTATCAACGCAAGCGTTCGGCTGCTaGCCATCGGTGCCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: LLLSDLTFVPVVYWFLSTQAFGC*PSVPQP
Trigger: TGGCTGGGGCACCGATGGTCAGCAGCCGAACGCTTG...CGTTGATAAAAACCAATAGACGACAGGGACAAAAGTGAGATCAGATAGGAGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR TCA 90 bp TTATCCCTGAAGGTCAGCTGCAGTAGAGACCCGGATTTCTTCAGTTTCTGCATGCTGGGATGTCCCGCATaGTCACCAGGAAGTGGAGAC +
Preference number: 4 (lower is better)
Translates to: LSLKVSCSRDPDFFSFCMLGCPA*SPGSGD
Trigger: GTCTCCACTTCCTGGTGATCATGCGGGACATCCCAG...CATGCAGAAACTGAAGAAATCCGGGTCTCTACTGCAGCTGACCTTCAGGGATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp GCATTATCCCTGAAGGTCAGCTGCAGTAGAGACCCGGATTTCTTCAGTTTCTGCTCTCATGCTGAGCATTaGAGGCCACCAGGGGTTCAG +
Preference number: 4 (lower is better)
Translates to: ALSLKVSCSRDPDFFSFCSHAEH*RPPGVQ
Trigger: CTGAACCCCTGGTGGCCTTCAATGCTCAGCATGAGA...GCAGAAACTGAAGAAATCCGGGTCTCTACTGCAGCTGACCTTCAGGGATAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp GGGATGTCTATGTATCCGGGGCCCTGCTGGTTGTCAGCATCTAAAACTATCTCCGCTTTGCTGGCCTGTTaGGTTCCTGTTGATGGCATC +
Preference number: 4 (lower is better)
Translates to: GMSMYPGPCWLSASKTISALLAC*VPVDGI
Trigger: GATGCCATCAACAGGAACTCAACAGGCCAGCAAAGC...GGAGATAGTTTTAGATGCTGACAACCAGCAGGGCCCCGGATACATAGACATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR TCA 90 bp GTTGAGGTAATACCGGAACCGGGGCCGTGTGAGGACCGATCGGATGATGATGTTTTCAAAACCTGGGAATaGACGGAATGGGTCACAGTG +
Preference number: 4 (lower is better)
Translates to: VEVIPEPGPCEDRSDDDVFKTWE*TEWVTV
Trigger: CACTGTGACCCATTCCGTTCATTCCCAGGTTTTGAA...AACATCATCATCCGATCGGTCCTCACACGGCCCCGGTTCCGGTATTACCTCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp GCATTATCCCTGAAGGTCAGCTGCAGTAGAGACCCGGATTTCTTCAGTTTCTGCTCAGATGGGACCCCATaGTGGAAGTGCCTGCCTTCA +
Preference number: 4 (lower is better)
Translates to: ALSLKVSCSRDPDFFSFCSDGTP*WKCLPS
Trigger: TGAAGGCAGGCACTTCCATCATGGGGTCCCATCTGA...GCAGAAACTGAAGAAATCCGGGTCTCTACTGCAGCTGACCTTCAGGGATAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp GGGATGTCTATGTATCCGGGGCCCTGCTGGTTGTCAGCATCTAAAACTATCTCCACGTGTGGAGTTTGTTaGGGTAATACCGGAACCGGG +
Preference number: 4 (lower is better)
Translates to: GMSMYPGPCWLSASKTISTCGVC*GNTGTG
Trigger: CCCGGTTCCGGTATTACCTCAACAAACTCCACACGT...GGAGATAGTTTTAGATGCTGACAACCAGCAGGGCCCCGGATACATAGACATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR TCA 90 bp CTCCTCCTATCTGATCTCACTTTTGTCCCTGTCGTCTATTGGTTTTTATCAACGTCCAGCACAGCGATGTaGGCGGCTCGGCCGATCAGG +
Preference number: 4 (lower is better)
Translates to: LLLSDLTFVPVVYWFLSTSSTAM*AARPIR
Trigger: CCTGATCGGCCGAGCCGCTCACATCGCTGTGCTGGA...CGTTGATAAAAACCAATAGACGACAGGGACAAAAGTGAGATCAGATAGGAGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR GCA 90 bp ATTGAGAACCCTGGTCCTAGATGCGTTTCCACACTTCAGAAGGGATTTTTGCAGCTGCTGCTCTCTGTCTaGCCAGCGATGGAGGCACTC +
Preference number: 4 (lower is better)
Translates to: IENPGPRCVSTLQKGFLQLLLSV*PAMEAL
Trigger: GAGTGCCTCCATCGCTGGGCAGACAGAGAGCAGCAG...CTGCAAAAATCCCTTCTGAAGTGTGGAAACGCATCTAGGACCAGGGTTCTCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR GCA 90 bp TCAGCATTATCCCTGAAGGTCAGCTGCAGTAGAGACCCGGATTTCTTCAGTTTCCTGAATGCAGGCTGCTaGTCTCTGTCTGCCCAGCGA +
Preference number: 4 (lower is better)
Translates to: SALSLKVSCSRDPDFFSFLNAGC*SLSAQR
Trigger: TCGCTGGGCAGACAGAGAGCAGCAGCCTGCATTCAG...GAAACTGAAGAAATCCGGGTCTCTACTGCAGCTGACCTTCAGGGATAATGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR GCA 90 bp GTGAGGACCGATCGGATGATGATGTTGCCAAGAGAATGGCCAATGAAGCTAATTGCTGCTGACCATCGGTaGCCCAGCCACATCCCTCAA +
Preference number: 4 (lower is better)
Translates to: VRTDRMMMLPREWPMKLIAADHR*PSHIPQ
Trigger: TTGAGGGATGTGGCTGGGGCACCGATGGTCAGCAGC...AATTAGCTTCATTGGCCATTCTCTTGGCAACATCATCATCCGATCGGTCCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR GCA 90 bp ACACTCCTGCAAAGCTGCCCATCTGGACTCATTCCCATGGTCTGCTTTTATTTTGCTGCTGACCATCGGTaGCCCAGCCACATCCCTCAA +
Preference number: 4 (lower is better)
Translates to: TLLQSCPSGLIPMVCFYFAADHR*PSHIPQ
Trigger: TTGAGGGATGTGGCTGGGGCACCGATGGTCAGCAGC...AAAATAAAAGCAGACCATGGGAATGAGTCCAGATGGGCAGCTTTGCAGGAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR GCA 90 bp TCGGATGATGATGTTGCCAAGAGAATGGCCAATGAAGCTAATTCGGGATATGGATTCCGGGGGTGGAAGTaGAGGCCAAGCGTTCGGCTG +
Preference number: 4 (lower is better)
Translates to: SDDDVAKRMANEANSGYGFRGWK*RPSVRL
Trigger: CAGCCGAACGCTTGGCCTGCACTTCCACCCCCGGAA...TCCATATCCCGAATTAGCTTCATTGGCCATTCTCTTGGCAACATCATCATCCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR GCA 90 bp AGTCACTTACCAATAACAGCTTATGTTGAGTCTTCAGTCTGGTTGTTCTCCTCCACCGGGACCTGGTGGTaGAGACCATTCCGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: SHLPITAYVESSVWLFSSTGTWW*RPFRGW
Trigger: CCACCCCCGGAATGGTCTGCACCACCAGGTCCCGGT...GGAGGAGAACAACCAGACTGAAGACTCAACATAAGCTGTTATTGGTAAGTGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR GCA 90 bp TCAGTGCCCCCTTCTGCTAGGTTAGTCTCACTCAGTGTTCCCTACTACAGACAATCGGTGCCACTTGTGTaGGTGCTGCATGCAGTTCTC +
Preference number: 4 (lower is better)
Translates to: SVPPSARLVSLSVPYYRQSVPLV*VLHAVL
Trigger: GAGAACTGCATGCAGCACGCACACAAGTGGCACCGA...TTGTCTGTAGTAGGGAACACTGAGTGAGACTAACCTAGCAGAAGGGGGCACTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR GCA 90 bp CTTCCCCCAGCATTAACTACCTGTGGTTTCCTTTTACCTAATTCGGGATATGGAGCAACTCCAGAGCCCTaGTTCGGGCCTCTGACCAGG +
Preference number: 4 (lower is better)
Translates to: LPPALTTCGFLLPNSGYGATPEP*FGPLTR
Trigger: CCTGGTCAGAGGCCCGAAGCAGGGCTCTGGAGTTGC...TCCATATCCCGAATTAGGTAAAAGGAAACCACAGGTAGTTAATGCTGGGGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR GCA 90 bp CGGATTAAAGTGCAGTCCTTGGCTTCAACCAGAGGGCCCAGGAGGTTGTTGATCGCAAAACCTCCATCTTaGTGCTTGGTGTCCGCATCT +
Preference number: 4 (lower is better)
Translates to: RIKVQSLASTRGPRRLLIAKPPS*CLVSAS
Trigger: AGATGCGGACACCAAGCAGCAAGATGGAGGTTTTGC...GATCAACAACCTCCTGGGCCCTCTGGTTGAAGCCAAGGACTGCACTTTAATCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp AGGACCGATCGGATGATGATGTTGCCAAGAGAATGGCCAATGAAGCTAATTCGGAGACCATTCCGGGGGTaGAAGTGCAGGCCAAGCGTT +
Preference number: 4 (lower is better)
Translates to: RTDRMMMLPREWPMKLIRRPFRG*KCRPSV
Trigger: AACGCTTGGCCTGCACTTCCACCCCCGGAATGGTCT...CCGAATTAGCTTCATTGGCCATTCTCTTGGCAACATCATCATCCGATCGGTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp GTCTGTAAAAGCAGGTCTCAGCTAAAGCTCTCCACCGATCGTAAGCATTACCAAGCCACCAGGGCAGCATaGACGGTCACCGAGATCACA +
Preference number: 4 (lower is better)
Translates to: VCKSRSQLKLSTDRKHYQATRAA*TVTEIT
Trigger: TGTGATCTCGGTGACCGTCCATGCTGCCCTGGTGGC...TTGGTAATGCTTACGATCGGTGGAGAGCTTTAGCTGAGACCTGCTTTTACAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395297.6
ENST00000482951.6
CDS-3UTR CCA 90 bp GTTGAGGTAATACCGGAACCGGGGCCGTGTGAGGACCGATCGGATGATGATGTTAGTAAAACTGATCAATaGCTGCTGCAGAGCCACCAG +
Preference number: 4 (lower is better)
Translates to: VEVIPEPGPCEDRSDDDVSKTDQ*LLQSHQ
Trigger: CTGGTGGCTCTGCAGCAGCCATTGATCAGTTTTACT...AACATCATCATCCGATCGGTCCTCACACGGCCCCGGTTCCGGTATTACCTCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp CCTGTTGAGTTCCTGTTGATGGCATCAGCAGCTGACGTACAGCTCAATTCAGGCTCTAGGGAGTTCCGGTaGAGGGCATGTCTTCGAACA +
Preference number: 4 (lower is better)
Translates to: PVEFLLMASAADVQLNSGSREFR*RACLRT
Trigger: TGTTCGAAGACATGCCCTCCACCGGAACTCCCTAGA...GCCTGAATTGAGCTGTACGTCAGCTGCTGATGCCATCAACAGGAACTCAACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR CCA 90 bp TGGCTGAATGAAATGGCACATAACGGTCTTGGGGAGAAGCAACCAGCACGACGTCCGCTTTGGCTTTGCTaGCCTGTTGAGTTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: WLNEMAHNGLGEKQPARRPLWLC*PVEFLL
Trigger: CAACAGGAACTCAACAGGCCAGCAAAGCCAAAGCGG...ACGTCGTGCTGGTTGCTTCTCCCCAAGACCGTTATGTGCCATTTCATTCAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp TTGTGTCGGATTAAAGTGCAGTCCTTGGCTTCAACCAGAGGGCCCAGGAGGTTGTCTGCAGAAGTCAGATaGGACCCCATGATGGAAGTG +
Preference number: 4 (lower is better)
Translates to: LCRIKVQSLASTRGPRRLSAEVR*DPMMEV
Trigger: CACTTCCATCATGGGGTCCCATCTGACTTCTGCAGA...CAACCTCCTGGGCCCTCTGGTTGAAGCCAAGGACTGCACTTTAATCCGACACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp TTATCCCTGAAGGTCAGCTGCAGTAGAGACCCGGATTTCTTCAGTTTCTGCATGAAGAGAATCCAGCCCTaGCAGGGGTCTCCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: LSLKVSCSRDPDFFSFCMKRIQP*QGSPWA
Trigger: TGCCCAAGGAGACCCCTGCCAGGGCTGGATTCTCTT...CATGCAGAAACTGAAGAAATCCGGGTCTCTACTGCAGCTGACCTTCAGGGATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp AGTCACTTACCAATAACAGCTTATGTTGAGTCTTCAGTCTGGTTGTTCTCCTCCGGCTGCGCTCACCTCTaGCGCCCTCACTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: SHLPITAYVESSVWLFSSGCAHL*RPHSSP
Trigger: AGGAGAGGAGTGAGGGCGCCAGAGGTGAGCGCAGCC...GGAGGAGAACAACCAGACTGAAGACTCAACATAAGCTGTTATTGGTAAGTGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR TCA 90 bp TGCTGTTGTTGTACAGGGTTCCCAGGTGAGGCCCAGAGAGTGACAGGAACGTGTAGCTCTGAGCACAGCTaGGAAAGTGTTTCTTCAACA +
Preference number: 4 (lower is better)
Translates to: CCCCTGFPGEAQRVTGTCSSEHS*ESVSST
Trigger: TGTTGAAGAAACACTTTCTCAGCTGTGCTCAGAGCT...ACACGTTCCTGTCACTCTCTGGGCCTCACCTGGGAACCCTGTACAACAACAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp CCCCCTTCTGCTAGGTTAGTCTCACTCAGTGTTCCCTACTACAGACAAAGATGTTCTCATGCTGAGCATTaGAGGCCACCAGGGGTTCAG +
Preference number: 4 (lower is better)
Translates to: PPSARLVSLSVPYYRQRCSHAEH*RPPGVQ
Trigger: CTGAACCCCTGGTGGCCTTCAATGCTCAGCATGAGA...ACATCTTTGTCTGTAGTAGGGAACACTGAGTGAGACTAACCTAGCAGAAGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR TCA 90 bp AGGACCGATCGGATGATGATGTTGCCAAGAGAATGGCCAATGAAGCTAATTCGGTCTCATGCTGAGCATTaGAGGCCACCAGGGGTTCAG +
Preference number: 4 (lower is better)
Translates to: RTDRMMMLPREWPMKLIRSHAEH*RPPGVQ
Trigger: CTGAACCCCTGGTGGCCTTCAATGCTCAGCATGAGA...CCGAATTAGCTTCATTGGCCATTCTCTTGGCAACATCATCATCCGATCGGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp TGGAGGCACTCAGTCTGTGGGGGATCCTTGAAGACACCTTCAAGGTCACTCGGAACCATCTTCCCCTCTTaGTCTATTCCCTTTCCTAGA +
Preference number: 4 (lower is better)
Translates to: WRHSVCGGSLKTPSRSLGTIFPS*SIPFPR
Trigger: TCTAGGAAAGGGAATAGATCAAGAGGGGAAGATGGT...TCCGAGTGACCTTGAAGGTGTCTTCAAGGATCCCCCACAGACTGAGTGCCTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR TCA 90 bp AGGACCGATCGGATGATGATGTTGCCAAGAGAATGGCCAATGAAGCTAATTCGGAGGGCTCAGAGGGGGTaGGTTTCAAGCTTAGCAGCA +
Preference number: 4 (lower is better)
Translates to: RTDRMMMLPREWPMKLIRRAQRG*VSSLAA
Trigger: TGCTGCTAAGCTTGAAACTCACCCCCTCTGAGCCCT...CCGAATTAGCTTCATTGGCCATTCTCTTGGCAACATCATCATCCGATCGGTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp CGGATTAAAGTGCAGTCCTTGGCTTCAACCAGAGGGCCCAGGAGGTTGTTGATCCTTGCTGTGCATATCTaGAGGTTCAGCAAAACCTCC +
Preference number: 4 (lower is better)
Translates to: RIKVQSLASTRGPRRLLILAVHI*RFSKTS
Trigger: GGAGGTTTTGCTGAACCTTCAGATATGCACAGCAAG...GATCAACAACCTCCTGGGCCCTCTGGTTGAAGCCAAGGACTGCACTTTAATCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp CGTGTGAGGACCGATCGGATGATGATGTTGCCAAGAGAATGGCCAATGAAGCTAGAGACCCTCAACCTCTaGGATGCCACTGTTGGAAAG +
Preference number: 4 (lower is better)
Translates to: RVRTDRMMMLPREWPMKLETLNL*DATVGK
Trigger: CTTTCCAACAGTGGCATCTCAGAGGTTGAGGGTCTC...TAGCTTCATTGGCCATTCTCTTGGCAACATCATCATCCGATCGGTCCTCACACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp TCAGTGCCCCCTTCTGCTAGGTTAGTCTCACTCAGTGTTCCCTACTACAGACAAGATGGCATCAGCAGCTaGCGTACAGCTCAATTCAGG +
Preference number: 4 (lower is better)
Translates to: SVPPSARLVSLSVPYYRQDGISS*RTAQFR
Trigger: CCTGAATTGAGCTGTACGTCAGCTGCTGATGCCATC...TTGTCTGTAGTAGGGAACACTGAGTGAGACTAACCTAGCAGAAGGGGGCACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR TCA 90 bp GCATTATCCCTGAAGGTCAGCTGCAGTAGAGACCCGGATTTCTTCAGTTTCTGCGCTTTGCTGGCCTGTTaGGTTCCTGTTGATGGCATC +
Preference number: 4 (lower is better)
Translates to: ALSLKVSCSRDPDFFSFCALLAC*VPVDGI
Trigger: GATGCCATCAACAGGAACTCAACAGGCCAGCAAAGC...GCAGAAACTGAAGAAATCCGGGTCTCTACTGCAGCTGACCTTCAGGGATAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp AAAGTGCAGTCCTTGGCTTCAACCAGAGGGCCCAGGAGGTTGTTGATCATTTCTAAGGATCCCAAAGGCTaGTGGGTGATGGGAAACAGG +
Preference number: 4 (lower is better)
Translates to: KVQSLASTRGPRRLLIISKDPKG*WVMGNR
Trigger: CCTGTTTCCCATCACCCATCAGCCTTTGGGATCCTT...AGAAATGATCAACAACCTCCTGGGCCCTCTGGTTGAAGCCAAGGACTGCACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp GTGCAAGACACAGATAAGTTCACAACCTCCACAGCCTTCAGGCTGTCCAGAGTAAAGGATCCCAAAGGCTaGTGGGTGATGGGAAACAGG +
Preference number: 4 (lower is better)
Translates to: VQDTDKFTTSTAFRLSRVKDPKG*WVMGNR
Trigger: CCTGTTTCCCATCACCCATCAGCCTTTGGGATCCTT...TACTCTGGACAGCCTGAAGGCTGTGGAGGTTGTGAACTTATCTGTGTCTTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR TCA 90 bp TCAGCATTATCCCTGAAGGTCAGCTGCAGTAGAGACCCGGATTTCTTCAGTTTCGTGAGGCCCAGAGAGTaGCAGGAACGTGTGGAGTTT +
Preference number: 4 (lower is better)
Translates to: SALSLKVSCSRDPDFFSFVRPRE*QERVEF
Trigger: AAACTCCACACGTTCCTGTCACTCTCTGGGCCTCAC...GAAACTGAAGAAATCCGGGTCTCTACTGCAGCTGACCTTCAGGGATAATGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp TCAGTGCCCCCTTCTGCTAGGTTAGTCTCACTCAGTGTTCCCTACTACAGACAACTCCAGGAAGAGTTCTaGATCCAGCACAGCGATGTG +
Preference number: 4 (lower is better)
Translates to: SVPPSARLVSLSVPYYRQLQEEF*IQHSDV
Trigger: CACATCGCTGTGCTGGATTCAGAACTCTTCCTGGAG...TTGTCTGTAGTAGGGAACACTGAGTGAGACTAACCTAGCAGAAGGGGGCACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR GCA 90 bp CTCCTCCTATCTGATCTCACTTTTGTCCCTGTCGTCTATTGGTTTTTATCAACGTTCCGGGGGTGGAAGTaGAGGCCAAGCGTTCGGCTG +
Preference number: 4 (lower is better)
Translates to: LLLSDLTFVPVVYWFLSTFRGWK*RPSVRL
Trigger: CAGCCGAACGCTTGGCCTGCACTTCCACCCCCGGAA...CGTTGATAAAAACCAATAGACGACAGGGACAAAAGTGAGATCAGATAGGAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR GCA 90 bp AAAGTGCAGTCCTTGGCTTCAACCAGAGGGCCCAGGAGGTTGTTGATCATTTCTCTGAGGAAGTCGGCTTaGAGTACCCAGCTCCAAAGA +
Preference number: 4 (lower is better)
Translates to: KVQSLASTRGPRRLLIISLRKSA*STQLQR
Trigger: TCTTTGGAGCTGGGTACTGCAAGCCGACTTCCTCAG...AGAAATGATCAACAACCTCCTGGGCCCTCTGGTTGAAGCCAAGGACTGCACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR GCA 90 bp TCAGTGCCCCCTTCTGCTAGGTTAGTCTCACTCAGTGTTCCCTACTACAGACAACACTTGTGTGCGTGCTaGATGCAGTTCTCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: SVPPSARLVSLSVPYYRQHLCAC*MQFSEV
Trigger: CACCTCTGAGAACTGCATGCAGCACGCACACAAGTG...TTGTCTGTAGTAGGGAACACTGAGTGAGACTAACCTAGCAGAAGGGGGCACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR GCA 90 bp GCATTATCCCTGAAGGTCAGCTGCAGTAGAGACCCGGATTTCTTCAGTTTCTGCTGCCACTTGTGTGCGTaGTGCATGCAGTTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: ALSLKVSCSRDPDFFSFCCHLCA*CMQFSE
Trigger: CTCTGAGAACTGCATGCAGCACGCACACAAGTGGCA...GCAGAAACTGAAGAAATCCGGGTCTCTACTGCAGCTGACCTTCAGGGATAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR GCA 90 bp ATGATGATGTTGCCAAGAGAATGGCCAATGAAGCTAATTCGGGATATGGAGAGGAGGCACAGGTCTCGGTaGCACTTGTGTGCGTGCTGC +
Preference number: 4 (lower is better)
Translates to: MMMLPREWPMKLIRDMERRHRSR*HLCACC
Trigger: GCAGCACGCACACAAGTGGCACCGAGACCTGTGCCT...CCTCTCCATATCCCGAATTAGCTTCATTGGCCATTCTCTTGGCAACATCATCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR GCA 90 bp GTTGAGGTAATACCGGAACCGGGGCCGTGTGAGGACCGATCGGATGATGATGTTAGATCCTTGCTTATCTaGTCAGCGATCTTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: VEVIPEPGPCEDRSDDDVRSLLI*SAIFSG
Trigger: TCCAGAGAAGATCGCTGAGCAGATAAGCAAGGATCT...AACATCATCATCCGATCGGTCCTCACACGGCCCCGGTTCCGGTATTACCTCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR GCA 90 bp TCAGTGCCCCCTTCTGCTAGGTTAGTCTCACTCAGTGTTCCCTACTACAGACAAAGGGACAGCTGGCTGTaGGTCTGTATCAGATTCTCC +
Preference number: 4 (lower is better)
Translates to: SVPPSARLVSLSVPYYRQRDSWL*VCIRFS
Trigger: GGAGAATCTGATACAGACGCACAGCCAGCTGTCCCT...TTGTCTGTAGTAGGGAACACTGAGTGAGACTAACCTAGCAGAAGGGGGCACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR GCA 90 bp CGGATTAAAGTGCAGTCCTTGGCTTCAACCAGAGGGCCCAGGAGGTTGTTGATCCCTCAACCTCTGAGATaGCACTGTTGGAAAGAGCTT +
Preference number: 4 (lower is better)
Translates to: RIKVQSLASTRGPRRLLIPQPLR*HCWKEL
Trigger: AAGCTCTTTCCAACAGTGGCATCTCAGAGGTTGAGG...GATCAACAACCTCCTGGGCCCTCTGGTTGAAGCCAAGGACTGCACTTTAATCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR GCA 90 bp TCAGTGCCCCCTTCTGCTAGGTTAGTCTCACTCAGTGTTCCCTACTACAGACAATCCCTGAAGGTCAGCTaGAGTAGAGACCCGGATTTC +
Preference number: 4 (lower is better)
Translates to: SVPPSARLVSLSVPYYRQSLKVS*SRDPDF
Trigger: GAAATCCGGGTCTCTACTGCAGCTGACCTTCAGGGA...TTGTCTGTAGTAGGGAACACTGAGTGAGACTAACCTAGCAGAAGGGGGCACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR GCA 90 bp TGGGCATCACATTTTCTTGAACAACTGACACATTTGAATCTATTGAGGATTCTAGAGAGCCCGCCCTGCTaGTCCCGCTGGCTCCGCTCC +
Preference number: 4 (lower is better)
Translates to: WASHFLEQLTHLNLLRILESPPC*SRWLRS
Trigger: GGAGCGGAGCCAGCGGGAGCAGCAGGGCGGGCTCTC...TAGAATCCTCAATAGATTCAAATGTGTCAGTTGTTCAAGAAAATGTGATGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp TCAGCATTATCCCTGAAGGTCAGCTGCAGTAGAGACCCGGATTTCTTCAGTTTCGAGGCACTCAGTCTGTaGGGGATCCTTGAAGACACC +
Preference number: 4 (lower is better)
Translates to: SALSLKVSCSRDPDFFSFEALSL*GILEDT
Trigger: GGTGTCTTCAAGGATCCCCCACAGACTGAGTGCCTC...GAAACTGAAGAAATCCGGGTCTCTACTGCAGCTGACCTTCAGGGATAATGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp CCCCCTTCTGCTAGGTTAGTCTCACTCAGTGTTCCCTACTACAGACAAAGATGTTGCACGGTGCTGTCATaGACACAGGCTGAATGCAGG +
Preference number: 4 (lower is better)
Translates to: PPSARLVSLSVPYYRQRCCTVLS*TQAECR
Trigger: CCTGCATTCAGCCTGTGTCCATGACAGCACCGTGCA...ACATCTTTGTCTGTAGTAGGGAACACTGAGTGAGACTAACCTAGCAGAAGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp GTTGAGGTAATACCGGAACCGGGGCCGTGTGAGGACCGATCGGATGATGATGTTCCACAGCATCATTTATaGGTACCTCTTCATTCCGGT +
Preference number: 4 (lower is better)
Translates to: VEVIPEPGPCEDRSDDDVPQHHL*VPLHSG
Trigger: ACCGGAATGAAGAGGTACCCATAAATGATGCTGTGG...AACATCATCATCCGATCGGTCCTCACACGGCCCCGGTTCCGGTATTACCTCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp TCAGCATTATCCCTGAAGGTCAGCTGCAGTAGAGACCCGGATTTCTTCAGTTTCCACAGAGTCATCATGTaGGACGTGAGCCAGGCCAGA +
Preference number: 4 (lower is better)
Translates to: SALSLKVSCSRDPDFFSFHRVIM*DVSQAR
Trigger: TCTGGCCTGGCTCACGTCCCACATGATGACTCTGTG...GAAACTGAAGAAATCCGGGTCTCTACTGCAGCTGACCTTCAGGGATAATGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp GCACCTGATGTTGAGAGAGACCCTCAACCTCTGAGATGCCACTGTTGGAAAGAGATATCCAGGGACAGCTaGCTGTGCGTCTGTATCAGA +
Preference number: 4 (lower is better)
Translates to: APDVERDPQPLRCHCWKEISRDS*LCVCIR
Trigger: TCTGATACAGACGCACAGCCAGCTGTCCCTGGATAT...CTCTTTCCAACAGTGGCATCTCAGAGGTTGAGGGTCTCTCTCAACATCAGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR CCA 90 bp GCACCTGATGTTGAGAGAGACCCTCAACCTCTGAGATGCCACTGTTGGAAAGAGGGCCACATTCTCACCTaGCTCTGGACACCTTATAAC +
Preference number: 4 (lower is better)
Translates to: APDVERDPQPLRCHCWKEGHILT*LWTPYN
Trigger: GTTATAAGGTGTCCAGAGCCAGGTGAGAATGTGGCC...CTCTTTCCAACAGTGGCATCTCAGAGGTTGAGGGTCTCTCTCAACATCAGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR CCA 90 bp CGGATTAAAGTGCAGTCCTTGGCTTCAACCAGAGGGCCCAGGAGGTTGTTGATCAGCCTGGATGCCGCTTaGCAAACTTGTGTTACTTTC +
Preference number: 4 (lower is better)
Translates to: RIKVQSLASTRGPRRLLISLDAA*QTCVTF
Trigger: GAAAGTAACACAAGTTTGCCAAGCGGCATCCAGGCT...GATCAACAACCTCCTGGGCCCTCTGGTTGAAGCCAAGGACTGCACTTTAATCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp TGGCTGAATGAAATGGCACATAACGGTCTTGGGGAGAAGCAACCAGCACGACGTTCTGGGCTACTGATGTaGGGAGCAGATACAGACTTG +
Preference number: 4 (lower is better)
Translates to: WLNEMAHNGLGEKQPARRSGLLM*GADTDL
Trigger: CAAGTCTGTATCTGCTCCCCACATCAGTAGCCCAGA...ACGTCGTGCTGGTTGCTTCTCCCCAAGACCGTTATGTGCCATTTCATTCAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp TCAGTGCCCCCTTCTGCTAGGTTAGTCTCACTCAGTGTTCCCTACTACAGACAACTCCATCTTGCTGCTTaGTGTCCGCATCTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: SVPPSARLVSLSVPYYRQLHLAA*CPHLQQ
Trigger: CTGCTGAAGATGCGGACACCAAGCAGCAAGATGGAG...TTGTCTGTAGTAGGGAACACTGAGTGAGACTAACCTAGCAGAAGGGGGCACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp CGGATTAAAGTGCAGTCCTTGGCTTCAACCAGAGGGCCCAGGAGGTTGTTGATCTTTGGTTTCAACACCTaGAGTGTTCTCAGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: RIKVQSLASTRGPRRLLIFGFNT*SVLSPA
Trigger: GGCAGGACTGAGAACACTCCAGGTGTTGAAACCAAA...GATCAACAACCTCCTGGGCCCTCTGGTTGAAGCCAAGGACTGCACTTTAATCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp AAAGTGCAGTCCTTGGCTTCAACCAGAGGGCCCAGGAGGTTGTTGATCATTTCTCAAGGTGAACCGCTTTaGCTTTGCTGGCCTGTTGAG +
Preference number: 4 (lower is better)
Translates to: KVQSLASTRGPRRLLIISQGEPL*LCWPVE
Trigger: CTCAACAGGCCAGCAAAGCCAAAGCGGTTCACCTTG...AGAAATGATCAACAACCTCCTGGGCCCTCTGGTTGAAGCCAAGGACTGCACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp GAGGGCATGTCTTCGAACAAACGGGTGCAAGACTTCCCGATCACTGGGCAACTCCCTGCCTTCAGCTCTTaGTTTTTCAAAACCTGGGAA +
Preference number: 4 (lower is better)
Translates to: EGMSSNKRVQDFPITGQLPAFSS*FFKTWE
Trigger: TTCCCAGGTTTTGAAAAACCAAGAGCTGAAGGCAGG...GAGTTGCCCAGTGATCGGGAAGTCTTGCACCCGTTTGTTCGAAGACATGCCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR CCA 90 bp GGGATGTCTATGTATCCGGGGCCCTGCTGGTTGTCAGCATCTAAAACTATCTCCGAAACAGGGTCTGTTTaGAAGAGAATCCAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: GMSMYPGPCWLSASKTISETGSV*KRIQPW
Trigger: CCAGGGCTGGATTCTCTTCCAAACAGACCCTGTTTC...GGAGATAGTTTTAGATGCTGACAACCAGCAGGGCCCCGGATACATAGACATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR CCA 90 bp ATACCGGAACCGGGGCCGTGTGAGGACCGATCGGATGATGATGTTGCCAAGAGACATTTCTGCATAAACTaGCCCTGTGTGTCTGTCTTT +
Preference number: 4 (lower is better)
Translates to: IPEPGPCEDRSDDDVAKRHFCIN*PCVSVF
Trigger: AAAGACAGACACACAGGGCCAGTTTATGCAGAAATG...TCTCTTGGCAACATCATCATCCGATCGGTCCTCACACGGCCCCGGTTCCGGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp CCCCCTTCTGCTAGGTTAGTCTCACTCAGTGTTCCCTACTACAGACAAAGATGTGTGTTGGGCAGGGCGTaGAACACGTTGTGTCGGATT +
Preference number: 4 (lower is better)
Translates to: PPSARLVSLSVPYYRQRCVLGRA*NTLCRI
Trigger: AATCCGACACAACGTGTTCCACGCCCTGCCCAACAC...ACATCTTTGTCTGTAGTAGGGAACACTGAGTGAGACTAACCTAGCAGAAGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp TCAGCATTATCCCTGAAGGTCAGCTGCAGTAGAGACCCGGATTTCTTCAGTTTCGTGTTGGGCAGGGCGTaGAACACGTTGTGTCGGATT +
Preference number: 4 (lower is better)
Translates to: SALSLKVSCSRDPDFFSFVLGRA*NTLCRI
Trigger: AATCCGACACAACGTGTTCCACGCCCTGCCCAACAC...GAAACTGAAGAAATCCGGGTCTCTACTGCAGCTGACCTTCAGGGATAATGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp AAACTTGTATTTACCAATAGTGTCACCTTTATCCCTCTTTACCTTAAGTCACCCCGCGGCGAGGCTGCCTaGAGGAGGAGCGAGCGGATG +
Preference number: 4 (lower is better)
Translates to: KLVFTNSVTFIPLYLKSPRGEAA*RRSERM
Trigger: CATCCGCTCGCTCCTCCTCCAGGCAGCCTCGCCGCG...GGGTGACTTAAGGTAAAGAGGGATAAAGGTGACACTATTGGTAAATACAAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp ACAAAAATTACGCAGAGAATGAAGACATACAAGACCATTATCTTGGCAGGCATTGCAGCACCTGCGAGCTaGTGTTGGGTCCCCGCGGCG +
Preference number: 4 (lower is better)
Translates to: TKITQRMKTYKTIILAGIAAPAS*CWVPAA
Trigger: CGCCGCGGGGACCCAACACCAGCTCGCAGGTGCTGC...AATGCCTGCCAAGATAATGGTCTTGTATGTCTTCATTCTCTGCGTAATTTTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395297.6
3UTR CAA 72 bp GTCAGGTTCCACCCGAGCCTCCGTCCCCCAATGCTGTaGAAGCTTCATTCTGAAATGGTGAGGTCTGTAAAA +
Preference number: 4 (lower is better)
Translates to: VRFHPSLRPPML*KLHSEMVRSVK
Trigger: TTTTACAGACCTCACCATTTCAGAATGAAGCTTCAACAGCATTGGGGGACGGAGGCTCGGGTGGAACCTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395297.6
ENST00000482951.6
3UTR CAA 72 bp AGAGTCATCATGTGGGACGTGAGCCAGGCCAGATCCTaGCTTATCTGCTCAGCGATCTTCTCTGGATTGTTC +
Preference number: 4 (lower is better)
Translates to: RVIMWDVSQARS*LICSAIFSGLF
Trigger: GAACAATCCAGAGAAGATCGCTGAGCAGATAAGCAAGGATCTGGCCTGGCTCACGTCCCACATGATGACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR CAA 72 bp CACATCTGCCACTGGATATGTCCCAGCATCAGATGTTaGGCCAGTCCAACATTCATCTTCAGGCACACCTGC +
Preference number: 4 (lower is better)
Translates to: HICHWICPSIRC*ASPTFIFRHTC
Trigger: GCAGGTGTGCCTGAAGATGAATGTTGGACTGGCCAAACATCTGATGCTGGGACATATCCAGTGGCAGATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
3UTR CAA 72 bp GAACCGCTTTGGCTTTGCTGGCCTGTTGAGTTCCTGTaGATGGCATCAGCAGCTGACGTACAGCTCAATTCA +
Preference number: 4 (lower is better)
Translates to: EPLWLCWPVEFL*MASAADVQLNS
Trigger: TGAATTGAGCTGTACGTCAGCTGCTGATGCCATCAACAGGAACTCAACAGGCCAGCAAAGCCAAAGCGGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR TCA 90 bp ACCTTTACCAAGCCAGGAGCCTCTTCCTGGACGAGTAAAACTGATCAATGGCTGCCACCCAAGAGTAAATaGACTCGGAAGACCACAGCA +
Preference number: 4 (lower is better)
Translates to: TFTKPGASSWTSKTDQWLPPKSK*TRKTTA
Trigger: TGCTGTGGTCTTCCGAGTTCATTTACTCTTGGGTGG...CAGCCATTGATCAGTTTTACTCGTCCAGGAAGAGGCTCCTGGCTTGGTAAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR TCA 90 bp TCAGCATTATCCCTGAAGGTCAGCTGCAGTAGAGACCCGGATTTCTTCAGTTTCGTAGAAGCTTCCCTCTaGGGAAGTCGGCTTGCAGTA +
Preference number: 4 (lower is better)
Translates to: SALSLKVSCSRDPDFFSFVEASL*GSRLAV
Trigger: TACTGCAAGCCGACTTCCTCAGAGGGAAGCTTCTAC...GAAACTGAAGAAATCCGGGTCTCTACTGCAGCTGACCTTCAGGGATAATGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp TGCAGTAGAGACCCGGATTTCTTCAGTTTCTGCATGAGCCATAAGCCTGTACTACTCCTACTCTCATGCTaGGCATTGAAGGCCACCAGG +
Preference number: 4 (lower is better)
Translates to: CSRDPDFFSFCMSHKPVLLLLSC*ALKATR
Trigger: CCTGGTGGCCTTCAATGCTCAGCATGAGAGTAGGAG...TAGTACAGGCTTATGGCTCATGCAGAAACTGAAGAAATCCGGGTCTCTACTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp CGTGTGAGGACCGATCGGATGATGATGTTGCCAAGAGAATGGCCAATGAAGCTAGAGTCACCACAAAGTTaGGAGCAAGATCCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: RVRTDRMMMLPREWPMKLESPQS*EQDPGE
Trigger: TTCCCCAGGATCTTGCTCTCAACTTTGTGGTGACTC...TAGCTTCATTGGCCATTCTCTTGGCAACATCATCATCCGATCGGTCCTCACACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp GTTGAGGTAATACCGGAACCGGGGCCGTGTGAGGACCGATCGGATGATGATGTTTTGGAAAGAGCTTGCTaGCCCACATTCAAGTCTTTA +
Preference number: 4 (lower is better)
Translates to: VEVIPEPGPCEDRSDDDVLERAC*PTFKSL
Trigger: TAAAGACTTGAATGTGGGTCAGCAAGCTCTTTCCAA...AACATCATCATCCGATCGGTCCTCACACGGCCCCGGTTCCGGTATTACCTCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp GCACCTGATGTTGAGAGAGACCCTCAACCTCTGAGATGCCACTGTTGGAAAGAGTTCAAAACCTGGGAATaGACGGAATGGGTCACAGTG +
Preference number: 4 (lower is better)
Translates to: APDVERDPQPLRCHCWKEFKTWE*TEWVTV
Trigger: CACTGTGACCCATTCCGTTCATTCCCAGGTTTTGAA...CTCTTTCCAACAGTGGCATCTCAGAGGTTGAGGGTCTCTCTCAACATCAGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR TCA 90 bp ATTGAGAACCCTGGTCCTAGATGCGTTTCCACACTTCAGAAGGGATTTTTGCAGTCAGATGGGACCCCATaGTGGAAGTGCCTGCCTTCA +
Preference number: 4 (lower is better)
Translates to: IENPGPRCVSTLQKGFLQSDGTP*WKCLPS
Trigger: TGAAGGCAGGCACTTCCATCATGGGGTCCCATCTGA...CTGCAAAAATCCCTTCTGAAGTGTGGAAACGCATCTAGGACCAGGGTTCTCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR TCA 90 bp TATGTCCCAGCATCAGATGTTTGGCCAGTCCAACATTCATCTTCAGGCACACCTCCAAAGGCTGATGGGTaGTGGGAAACAGGGTCTGTT +
Preference number: 4 (lower is better)
Translates to: YVPASDVWPVQHSSSGTPPKADG*WETGSV
Trigger: AACAGACCCTGTTTCCCATCACCCATCAGCCTTTGG...AGGTGTGCCTGAAGATGAATGTTGGACTGGCCAAACATCTGATGCTGGGACATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR GCA 90 bp GTGAGGACCGATCGGATGATGATGTTGCCAAGAGAATGGCCAATGAAGCTAATTGTGGTCACTTGGGAGTaGAGAGTGACTGTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: VRTDRMMMLPREWPMKLIVVTWE*RVTVSR
Trigger: CCTGGACACAGTCACTCTGCACTCCCAAGTGACCAC...AATTAGCTTCATTGGCCATTCTCTTGGCAACATCATCATCCGATCGGTCCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR GCA 90 bp GTCTGTAAAAGCAGGTCTCAGCTAAAGCTCTCCACCGATCGTAAGCATTACCAAGTGGTCACTTGGGAGTaGAGAGTGACTGTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: VCKSRSQLKLSTDRKHYQVVTWE*RVTVSR
Trigger: CCTGGACACAGTCACTCTGCACTCCCAAGTGACCAC...TTGGTAATGCTTACGATCGGTGGAGAGCTTTAGCTGAGACCTGCTTTTACAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395297.6
ENST00000482951.6
CDS-3UTR GCA 90 bp AGGACCGATCGGATGATGATGTTGCCAAGAGAATGGCCAATGAAGCTAATTCGGAGGGACAGCTGGCTGTaGGTCTGTATCAGATTCTCC +
Preference number: 4 (lower is better)
Translates to: RTDRMMMLPREWPMKLIRRDSWL*VCIRFS
Trigger: GGAGAATCTGATACAGACGCACAGCCAGCTGTCCCT...CCGAATTAGCTTCATTGGCCATTCTCTTGGCAACATCATCATCCGATCGGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR GCA 90 bp AAAGTGCAGTCCTTGGCTTCAACCAGAGGGCCCAGGAGGTTGTTGATCATTTCTGCAAAACCTCCATCTTaGTGCTTGGTGTCCGCATCT +
Preference number: 4 (lower is better)
Translates to: KVQSLASTRGPRRLLIISAKPPS*CLVSAS
Trigger: AGATGCGGACACCAAGCAGCAAGATGGAGGTTTTGC...AGAAATGATCAACAACCTCCTGGGCCCTCTGGTTGAAGCCAAGGACTGCACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR GCA 90 bp GTCTGTAAAAGCAGGTCTCAGCTAAAGCTCTCCACCGATCGTAAGCATTACCAAGGGGCACACAGTGCCTaGTTTATGTTTAGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: VCKSRSQLKLSTDRKHYQGAHSA*FMFSLR
Trigger: CCGGAGGCTAAACATAAAGCAGGCACTGTGTGCCCC...TTGGTAATGCTTACGATCGGTGGAGAGCTTTAGCTGAGACCTGCTTTTACAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395297.6
ENST00000482951.6
CDS-3UTR GCA 90 bp CCCCCTTCTGCTAGGTTAGTCTCACTCAGTGTTCCCTACTACAGACAAAGATGTACACTCCTGCAAAGCTaGCCATCTGGACTCATTCCC +
Preference number: 4 (lower is better)
Translates to: PPSARLVSLSVPYYRQRCTLLQS*PSGLIP
Trigger: GGGAATGAGTCCAGATGGGCAGCTTTGCAGGAGTGT...ACATCTTTGTCTGTAGTAGGGAACACTGAGTGAGACTAACCTAGCAGAAGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp ATTGAGAACCCTGGTCCTAGATGCGTTTCCACACTTCAGAAGGGATTTTTGCAGGAGGCACTCAGTCTGTaGGGGATCCTTGAAGACACC +
Preference number: 4 (lower is better)
Translates to: IENPGPRCVSTLQKGFLQEALSL*GILEDT
Trigger: GGTGTCTTCAAGGATCCCCCACAGACTGAGTGCCTC...CTGCAAAAATCCCTTCTGAAGTGTGGAAACGCATCTAGGACCAGGGTTCTCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp ACATTTCAATCCTGGCTGAATGAAATGGCACATAACGGTCTTGGGGAGAAGCAAAGACCATTCCGGGGGTaGAAGTGCAGGCCAAGCGTT +
Preference number: 4 (lower is better)
Translates to: TFQSWLNEMAHNGLGEKQRPFRG*KCRPSV
Trigger: AACGCTTGGCCTGCACTTCCACCCCCGGAATGGTCT...TTGCTTCTCCCCAAGACCGTTATGTGCCATTTCATTCAGCCAGGATTGAAATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp CTGTCTTACTTATCCCTACTGTCCAGGTTCATTCATCTCTTCCATACAACGAAAATGACCGGGACCTGGTaGTGCAGACCATTCCGGGGG +
Preference number: 4 (lower is better)
Translates to: LSYLSLLSRFIHLFHTTKMTGTW*CRPFRG
Trigger: CCCCCGGAATGGTCTGCACCACCAGGTCCCGGTCAT...TTTCGTTGTATGGAAGAGATGAATGAACCTGGACAGTAGGGATAAGTAAGACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp GCACCTGATGTTGAGAGAGACCCTCAACCTCTGAGATGCCACTGTTGGAAAGAGAGCCTGGATGCCGCTTaGCAAACTTGTGTTACTTTC +
Preference number: 4 (lower is better)
Translates to: APDVERDPQPLRCHCWKESLDAA*QTCVTF
Trigger: GAAAGTAACACAAGTTTGCCAAGCGGCATCCAGGCT...CTCTTTCCAACAGTGGCATCTCAGAGGTTGAGGGTCTCTCTCAACATCAGGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR CCA 90 bp CTTCATTCCGGTATAAGATCTGAAAGACCCGGCTGTGCACGGTGCTGTCATGGATTTGGTTTCAACACCTaGAGTGTTCTCAGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: LHSGIRSERPGCARCCHGFGFNT*SVLSPA
Trigger: GGCAGGACTGAGAACACTCCAGGTGTTGAAACCAAA...TCCATGACAGCACCGTGCACAGCCGGGTCTTTCAGATCTTATACCGGAATGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR CCA 90 bp GATGATGTTGCCAAGAGAATGGCCAATGAAGCTAATTCGGGATATGGAGAGGTTCGGAATGGGTCACAGTaGGGCACACAGTGCCTGCTT +
Preference number: 4 (lower is better)
Translates to: DDVAKRMANEANSGYGEVRNGSQ*GTQCLL
Trigger: AAGCAGGCACTGTGTGCCCCACTGTGACCCATTCCG...AACCTCTCCATATCCCGAATTAGCTTCATTGGCCATTCTCTTGGCAACATCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp CGTGTGAGGACCGATCGGATGATGATGTTGCCAAGAGAATGGCCAATGAAGCTATCTGCAGAAGTCAGATaGGACCCCATGATGGAAGTG +
Preference number: 4 (lower is better)
Translates to: RVRTDRMMMLPREWPMKLSAEVR*DPMMEV
Trigger: CACTTCCATCATGGGGTCCCATCTGACTTCTGCAGA...TAGCTTCATTGGCCATTCTCTTGGCAACATCATCATCCGATCGGTCCTCACACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp GACCCGGATTTCTTCAGTTTCTGCATGAGCCATAAGCCTGTACTAACCAGGGTGTTAAAGTGCAGTCCTTaGCTTCAACCAGAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: DPDFFSFCMSHKPVLTRVLKCSP*LQPEGP
Trigger: TGGGCCCTCTGGTTGAAGCCAAGGACTGCACTTTAA...CACCCTGGTTAGTACAGGCTTATGGCTCATGCAGAAACTGAAGAAATCCGGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp TCAGTGCCCCCTTCTGCTAGGTTAGTCTCACTCAGTGTTCCCTACTACAGACAACTGATGCGGTTGCTATaGTTATGGAACCCCGCAACT +
Preference number: 4 (lower is better)
Translates to: SVPPSARLVSLSVPYYRQLMRLL*LWNPAT
Trigger: AGTTGCGGGGTTCCATAACCATAGCAACCGCATCAG...TTGTCTGTAGTAGGGAACACTGAGTGAGACTAACCTAGCAGAAGGGGGCACTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395297.6
3UTR CAA 72 bp AGTGTTCTCAGTCCTGCCATCAGGAAGACAGTGTCCTaGAGCATCAAACTGCTTCCCTTTCCCTTTGGGGAT +
Preference number: 4 (lower is better)
Translates to: SVLSPAIRKTVS*SIKLLPFPFGD
Trigger: ATCCCCAAAGGGAAAGGGAAGCAGTTTGATGCTCAAGGACACTGTCTTCCTGATGGCAGGACTGAGAACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR TCA 90 bp AAACATCCTCTCACTGACTTCCTCATCCAACGTGCTGGAATGGGTAGAAACAACTCTGTGGGGGATCCTTaGAGACACCTTCAAGGTCAC +
Preference number: 4 (lower is better)
Translates to: KHPLTDFLIQRAGMGRNNSVGDP*RHLQGH
Trigger: GTGACCTTGAAGGTGTCTTCAAGGATCCCCCACAGA...GTTGTTTCTACCCATTCCAGCACGTTGGATGAGGAAGTCAGTGAGAGGATGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR TCA 90 bp ATGATGATGTTGCCAAGAGAATGGCCAATGAAGCTAATTCGGGATATGGAGAGGGGAAATAGTCGAACATaGCCGGGACCTGGTGGTGCA +
Preference number: 4 (lower is better)
Translates to: MMMLPREWPMKLIRDMERGNSRT*PGPGGA
Trigger: TGCACCACCAGGTCCCGGTCATGTTCGACTATTTCC...CCTCTCCATATCCCGAATTAGCTTCATTGGCCATTCTCTTGGCAACATCATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp ACATTTCAATCCTGGCTGAATGAAATGGCACATAACGGTCTTGGGGAGAAGCAAGGAAATAGTCGAACATaGCCGGGACCTGGTGGTGCA +
Preference number: 4 (lower is better)
Translates to: TFQSWLNEMAHNGLGEKQGNSRT*PGPGGA
Trigger: TGCACCACCAGGTCCCGGTCATGTTCGACTATTTCC...TTGCTTCTCCCCAAGACCGTTATGTGCCATTTCATTCAGCCAGGATTGAAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp GTCTGTAAAAGCAGGTCTCAGCTAAAGCTCTCCACCGATCGTAAGCATTACCAATGTGGTGTTCCTGGGTaGGATAAGTGGTCACTTGGG +
Preference number: 4 (lower is better)
Translates to: VCKSRSQLKLSTDRKHYQCGVPG*DKWSLG
Trigger: CCCAAGTGACCACTTATCTCACCCAGGAACACCACA...TTGGTAATGCTTACGATCGGTGGAGAGCTTTAGCTGAGACCTGCTTTTACAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395297.6
ENST00000482951.6
CDS-3UTR TCA 90 bp TGGCTGAATGAAATGGCACATAACGGTCTTGGGGAGAAGCAACCAGCACGACGTGAGCACATGTCCATATaGTTTTGTGTGGCCACATTC +
Preference number: 4 (lower is better)
Translates to: WLNEMAHNGLGEKQPARREHMSI*FCVATF
Trigger: GAATGTGGCCACACAAAATCATATGGACATGTGCTC...ACGTCGTGCTGGTTGCTTCTCCCCAAGACCGTTATGTGCCATTTCATTCAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp CCGTGTGAGGACCGATCGGATGATGATGTTGCCAAGAGAATGGCCAATGAAGCTGAGCACATGTCCATATaGTTTTGTGTGGCCACATTC +
Preference number: 4 (lower is better)
Translates to: PCEDRSDDDVAKRMANEAEHMSI*FCVATF
Trigger: GAATGTGGCCACACAAAATCATATGGACATGTGCTC...AGCTTCATTGGCCATTCTCTTGGCAACATCATCATCCGATCGGTCCTCACACGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp ACACTCCTGCAAAGCTGCCCATCTGGACTCATTCCCATGGTCTGCTTTTATTTTTCCTCAAGTGCTCTATaGAGAGATCTGGTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: TLLQSCPSGLIPMVCFYFSSSAL*RDLVLG
Trigger: CCCCAGGACCAGATCTCTTCATAGAGCACTTGAGGA...AAAATAAAAGCAGACCATGGGAATGAGTCCAGATGGGCAGCTTTGCAGGAGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR TCA 90 bp TGCAGTAGAGACCCGGATTTCTTCAGTTTCTGCATGAGCCATAAGCCTGTACTATCCTCAAGTGCTCTATaGAGAGATCTGGTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: CSRDPDFFSFCMSHKPVLSSSAL*RDLVLG
Trigger: CCCCAGGACCAGATCTCTTCATAGAGCACTTGAGGA...TAGTACAGGCTTATGGCTCATGCAGAAACTGAAGAAATCCGGGTCTCTACTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp ACACTCCTGCAAAGCTGCCCATCTGGACTCATTCCCATGGTCTGCTTTTATTTTGCTTTGCTGGCCTGTTaGGTTCCTGTTGATGGCATC +
Preference number: 4 (lower is better)
Translates to: TLLQSCPSGLIPMVCFYFALLAC*VPVDGI
Trigger: GATGCCATCAACAGGAACTCAACAGGCCAGCAAAGC...AAAATAAAAGCAGACCATGGGAATGAGTCCAGATGGGCAGCTTTGCAGGAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR TCA 90 bp CCCCCAGCATTAACTACCTGTGGTTTCCTTTTACCTAATTCGGGATATGGAGAGGCTTTGCTGGCCTGTTaGGTTCCTGTTGATGGCATC +
Preference number: 4 (lower is better)
Translates to: PPALTTCGFLLPNSGYGEALLAC*VPVDGI
Trigger: GATGCCATCAACAGGAACTCAACAGGCCAGCAAAGC...CTCTCCATATCCCGAATTAGGTAAAAGGAAACCACAGGTAGTTAATGCTGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR TCA 90 bp ACACTCCTGCAAAGCTGCCCATCTGGACTCATTCCCATGGTCTGCTTTTATTTTGGAGCCCCAGTTCTATaGAAGTCTTTACCAGCCGGA +
Preference number: 4 (lower is better)
Translates to: TLLQSCPSGLIPMVCFYFGAPVL*KSLPAG
Trigger: TCCGGCTGGTAAAGACTTTCATAGAACTGGGGCTCC...AAAATAAAAGCAGACCATGGGAATGAGTCCAGATGGGCAGCTTTGCAGGAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR TCA 90 bp TGTACTAACCAGGGTGCTGTTGTTGTACAGGGTTCCCAGGTGAGGCCCAGAGAGATCATGAGGATTTACTaGTATCACCTGCACGTGAAA +
Preference number: 4 (lower is better)
Translates to: CTNQGAVVVQGSQVRPREIMRIY*YHLHVK
Trigger: TTTCACGTGCAGGTGATATCAGTAAATCCTCATGAT...CTCTCTGGGCCTCACCTGGGAACCCTGTACAACAACAGCACCCTGGTTAGTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR TCA 90 bp GAGGGCATGTCTTCGAACAAACGGGTGCAAGACTTCCCGATCACTGGGCAACTCGAGGTAAGTCTATCATaGGGATTTACTGATATCACC +
Preference number: 4 (lower is better)
Translates to: EGMSSNKRVQDFPITGQLEVSLS*GFTDIT
Trigger: GGTGATATCAGTAAATCCTCATGATAGACTTACCTC...GAGTTGCCCAGTGATCGGGAAGTCTTGCACCCGTTTGTTCGAAGACATGCCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR GCA 90 bp TCGGATGATGATGTTGCCAAGAGAATGGCCAATGAAGCTAATTCGGGATATGGATGGACACAGGCTGAATaGAGGCTGCTGCTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: SDDDVAKRMANEANSGYGWTQAE*RLLLSV
Trigger: GACAGAGAGCAGCAGCCTGCATTCAGCCTGTGTCCA...TCCATATCCCGAATTAGCTTCATTGGCCATTCTCTTGGCAACATCATCATCCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR GCA 90 bp ATTGAGAACCCTGGTCCTAGATGCGTTTCCACACTTCAGAAGGGATTTTTGCAGCTGAGGAAGTCGGCTTaGAGTACCCAGCTCCAAAGA +
Preference number: 4 (lower is better)
Translates to: IENPGPRCVSTLQKGFLQLRKSA*STQLQR
Trigger: TCTTTGGAGCTGGGTACTGCAAGCCGACTTCCTCAG...CTGCAAAAATCCCTTCTGAAGTGTGGAAACGCATCTAGGACCAGGGTTCTCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR GCA 90 bp TGCAGTAGAGACCCGGATTTCTTCAGTTTCTGCATGAGCCATAAGCCTGTACTACACTTGTGTGCGTGCTaGATGCAGTTCTCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: CSRDPDFFSFCMSHKPVLHLCAC*MQFSEV
Trigger: CACCTCTGAGAACTGCATGCAGCACGCACACAAGTG...TAGTACAGGCTTATGGCTCATGCAGAAACTGAAGAAATCCGGGTCTCTACTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR GCA 90 bp CTTATCCCTACTGTCCAGGTTCATTCATCTCTTCCATACAACGAAATGATTCTTGATGTCCAGGCACTCTaGAGGCAGCGGGGGCATGCT +
Preference number: 4 (lower is better)
Translates to: LIPTVQVHSSLPYNEMILDVQAL*RQRGHA
Trigger: AGCATGCCCCCGCTGCCTGCAGAGTGCCTGGACATC...AAGAATCATTTCGTTGTATGGAAGAGATGAATGAACCTGGACAGTAGGGATAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR GCA 90 bp TCCTCATCCAACGTGCTGGAATGGGTAGAAACAACTCCAAAGGATCCCAAAGGCAGAAGTATCCACATCTaGCACTGGATATGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: SSSNVLEWVETTPKDPKGRSIHI*HWICPS
Trigger: GCTGGGACATATCCAGTGGCAGATGTGGATACTTCT...GCCTTTGGGATCCTTTGGAGTTGTTTCTACCCATTCCAGCACGTTGGATGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR GCA 90 bp GCATTATCCCTGAAGGTCAGCTGCAGTAGAGACCCGGATTTCTTCAGTTTCTGCGGGAACCTTGGCTCTTaGTGTGCATATCTGAAGGTT +
Preference number: 4 (lower is better)
Translates to: ALSLKVSCSRDPDFFSFCGNLGS*CAYLKV
Trigger: AACCTTCAGATATGCACAGCAAGAGCCAAGGTTCCC...GCAGAAACTGAAGAAATCCGGGTCTCTACTGCAGCTGACCTTCAGGGATAATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR GCA 90 bp TGGCTGAATGAAATGGCACATAACGGTCTTGGGGAGAAGCAACCAGCACGACGTCCTGGGGTTTTCAAGTaGTATGACGCGTGGTATTTT +
Preference number: 4 (lower is better)
Translates to: WLNEMAHNGLGEKQPARRPGVFK*YDAWYF
Trigger: AAAATACCACGCGTCATAGCACTTGAAAACCCCAGG...ACGTCGTGCTGGTTGCTTCTCCCCAAGACCGTTATGTGCCATTTCATTCAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR GCA 90 bp CCCCCAGCATTAACTACCTGTGGTTTCCTTTTACCTAATTCGGGATATGGAGAGGAACCGCTTTGGCTTTaGTGGCCTGTTGAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: PPALTTCGFLLPNSGYGEEPLWL*WPVEFL
Trigger: CAGGAACTCAACAGGCCAGCAAAGCCAAAGCGGTTC...CTCTCCATATCCCGAATTAGGTAAAAGGAAACCACAGGTAGTTAATGCTGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR GCA 90 bp CTTCCCCCAGCATTAACTACCTGTGGTTTCCTTTTACCTAATTCGGGATATGGAGGGGCACACAGTGCCTaGTTTATGTTTAGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: LPPALTTCGFLLPNSGYGGAHSA*FMFSLR
Trigger: CCGGAGGCTAAACATAAAGCAGGCACTGTGTGCCCC...TCCATATCCCGAATTAGGTAAAAGGAAACCACAGGTAGTTAATGCTGGGGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR GCA 90 bp CCTACTACCACTTTGCTTAGCCCAGTCCTGTCTAATCCATACTTATCTCTAGAGGGGGCACACAGTGCCTaGTTTATGTTTAGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: PTTTLLSPVLSNPYLSLEGAHSA*FMFSLR
Trigger: CCGGAGGCTAAACATAAAGCAGGCACTGTGTGCCCC...CTCTAGAGATAAGTATGGATTAGACAGGACTGGGCTAAGCAAAGTGGTAGTAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR GCA 90 bp CTGTCTTACTTATCCCTACTGTCCAGGTTCATTCATCTCTTCCATACAACGAAATACCAGCCGGAGGTCTaGACTGTTCCCATCCAGGCC +
Preference number: 4 (lower is better)
Translates to: LSYLSLLSRFIHLFHTTKYQPEV*TVPIQA
Trigger: GGCCTGGATGGGAACAGTGCAGACCTCCGGCTGGTA...TTTCGTTGTATGGAAGAGATGAATGAACCTGGACAGTAGGGATAAGTAAGACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp ATGATGATGTTGCCAAGAGAATGGCCAATGAAGCTAATTCGGGATATGGAGAGGGAGGCACTCAGTCTGTaGGGGATCCTTGAAGACACC +
Preference number: 4 (lower is better)
Translates to: MMMLPREWPMKLIRDMEREALSL*GILEDT
Trigger: GGTGTCTTCAAGGATCCCCCACAGACTGAGTGCCTC...CCTCTCCATATCCCGAATTAGCTTCATTGGCCATTCTCTTGGCAACATCATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp GATGATGTTGCCAAGAGAATGGCCAATGAAGCTAATTCGGGATATGGAGAGGTTTGCACGGTGCTGTCATaGACACAGGCTGAATGCAGG +
Preference number: 4 (lower is better)
Translates to: DDVAKRMANEANSGYGEVCTVLS*TQAECR
Trigger: CCTGCATTCAGCCTGTGTCCATGACAGCACCGTGCA...AACCTCTCCATATCCCGAATTAGCTTCATTGGCCATTCTCTTGGCAACATCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp GCATTATCCCTGAAGGTCAGCTGCAGTAGAGACCCGGATTTCTTCAGTTTCTGCCCAGGAGCCTCTTCCTaGACGAGTAAAACTGATCAA +
Preference number: 4 (lower is better)
Translates to: ALSLKVSCSRDPDFFSFCPGASS*TSKTDQ
Trigger: TTGATCAGTTTTACTCGTCCAGGAAGAGGCTCCTGG...GCAGAAACTGAAGAAATCCGGGTCTCTACTGCAGCTGACCTTCAGGGATAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp TCAGCATTATCCCTGAAGGTCAGCTGCAGTAGAGACCCGGATTTCTTCAGTTTCATATCCAGGGACAGCTaGCTGTGCGTCTGTATCAGA +
Preference number: 4 (lower is better)
Translates to: SALSLKVSCSRDPDFFSFISRDS*LCVCIR
Trigger: TCTGATACAGACGCACAGCCAGCTGTCCCTGGATAT...GAAACTGAAGAAATCCGGGTCTCTACTGCAGCTGACCTTCAGGGATAATGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp GACCCGGATTTCTTCAGTTTCTGCATGAGCCATAAGCCTGTACTAACCAGGGTGATCCACATCTGCCACTaGATATGTCCCAGCATCAGA +
Preference number: 4 (lower is better)
Translates to: DPDFFSFCMSHKPVLTRVIHICH*ICPSIR
Trigger: TCTGATGCTGGGACATATCCAGTGGCAGATGTGGAT...CACCCTGGTTAGTACAGGCTTATGGCTCATGCAGAAACTGAAGAAATCCGGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp GACCCGGATTTCTTCAGTTTCTGCATGAGCCATAAGCCTGTACTAACCAGGGTGTCCATCCTCTGGACCTaGACTCCTTCTAGAAGTATC +
Preference number: 4 (lower is better)
Translates to: DPDFFSFCMSHKPVLTRVSILWT*TPSRSI
Trigger: GATACTTCTAGAAGGAGTCCAGGTCCAGAGGATGGA...CACCCTGGTTAGTACAGGCTTATGGCTCATGCAGAAACTGAAGAAATCCGGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp GACCCGGATTTCTTCAGTTTCTGCATGAGCCATAAGCCTGTACTAACCAGGGTGGAGATGGCATTTTGGTaGCTTCCACCTACTACCACT +
Preference number: 4 (lower is better)
Translates to: DPDFFSFCMSHKPVLTRVEMAFW*LPPTTT
Trigger: AGTGGTAGTAGGTGGAAGCCACCAAAATGCCATCTC...CACCCTGGTTAGTACAGGCTTATGGCTCATGCAGAAACTGAAGAAATCCGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp ACACTCCTGCAAAGCTGCCCATCTGGACTCATTCCCATGGTCTGCTTTTATTTTTCTAGGGAGTTCCGGTaGAGGGCATGTCTTCGAACA +
Preference number: 4 (lower is better)
Translates to: TLLQSCPSGLIPMVCFYFSREFR*RACLRT
Trigger: TGTTCGAAGACATGCCCTCCACCGGAACTCCCTAGA...AAAATAAAAGCAGACCATGGGAATGAGTCCAGATGGGCAGCTTTGCAGGAGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp GTCTGTAAAAGCAGGTCTCAGCTAAAGCTCTCCACCGATCGTAAGCATTACCAAGAGGTGAGAGAAGCCTaGATGCCGCTTGGCAAACTT +
Preference number: 4 (lower is better)
Translates to: VCKSRSQLKLSTDRKHYQEVREA*MPLGKL
Trigger: AAGTTTGCCAAGCGGCATCCAGGCTTCTCTCACCTC...TTGGTAATGCTTACGATCGGTGGAGAGCTTTAGCTGAGACCTGCTTTTACAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395297.6
ENST00000482951.6
CDS-3UTR CCA 90 bp TTATCCCTGAAGGTCAGCTGCAGTAGAGACCCGGATTTCTTCAGTTTCTGCATGGATCCTGGGGAACCTTaGCTCTTGCTGTGCATATCT +
Preference number: 4 (lower is better)
Translates to: LSLKVSCSRDPDFFSFCMDPGEP*LLLCIS
Trigger: AGATATGCACAGCAAGAGCCAAGGTTCCCCAGGATC...CATGCAGAAACTGAAGAAATCCGGGTCTCTACTGCAGCTGACCTTCAGGGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp CCCCCTTCTGCTAGGTTAGTCTCACTCAGTGTTCCCTACTACAGACAAAGATGTTTGAGAGCAAGATCCTaGGGAACCTTGGCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: PPSARLVSLSVPYYRQRCLRARS*GTLALA
Trigger: AGCAAGAGCCAAGGTTCCCCAGGATCTTGCTCTCAA...ACATCTTTGTCTGTAGTAGGGAACACTGAGTGAGACTAACCTAGCAGAAGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp AGGACCGATCGGATGATGATGTTGCCAAGAGAATGGCCAATGAAGCTAATTCGGTTGAGAGCAAGATCCTaGGGAACCTTGGCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: RTDRMMMLPREWPMKLIRLRARS*GTLALA
Trigger: AGCAAGAGCCAAGGTTCCCCAGGATCTTGCTCTCAA...CCGAATTAGCTTCATTGGCCATTCTCTTGGCAACATCATCATCCGATCGGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp CCCCCAGCATTAACTACCTGTGGTTTCCTTTTACCTAATTCGGGATATGGAGAGATCTCCACCAGGGGATaGTCTGCTCCAGCATCTGTT +
Preference number: 4 (lower is better)
Translates to: PPALTTCGFLLPNSGYGEISTRG*SAPASV
Trigger: AACAGATGCTGGAGCAGACCATCCCCTGGTGGAGAT...CTCTCCATATCCCGAATTAGGTAAAAGGAAACCACAGGTAGTTAATGCTGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR CCA 90 bp TCCTCATCCAACGTGCTGGAATGGGTAGAAACAACTCCAAAGGATCCCAAAGGCTTTAGGCATGCCCTTTaGGGTTTCCTCAAGTGCTCT +
Preference number: 4 (lower is better)
Translates to: SSSNVLEWVETTPKDPKGFRHAL*GFLKCS
Trigger: AGAGCACTTGAGGAAACCCCAAAGGGCATGCCTAAA...GCCTTTGGGATCCTTTGGAGTTGTTTCTACCCATTCCAGCACGTTGGATGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR CCA 90 bp GTCTGTAAAAGCAGGTCTCAGCTAAAGCTCTCCACCGATCGTAAGCATTACCAACCGCTTTGGCTTTGCTaGCCTGTTGAGTTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: VCKSRSQLKLSTDRKHYQPLWLC*PVEFLL
Trigger: CAACAGGAACTCAACAGGCCAGCAAAGCCAAAGCGG...TTGGTAATGCTTACGATCGGTGGAGAGCTTTAGCTGAGACCTGCTTTTACAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395297.6
ENST00000482951.6
CDS-3UTR CCA 90 bp CTCCTCCTATCTGATCTCACTTTTGTCCCTGTCGTCTATTGGTTTTTATCAACGCGGAATGGGTCACAGTaGGGCACACAGTGCCTGCTT +
Preference number: 4 (lower is better)
Translates to: LLLSDLTFVPVVYWFLSTRNGSQ*GTQCLL
Trigger: AAGCAGGCACTGTGTGCCCCACTGTGACCCATTCCG...CGTTGATAAAAACCAATAGACGACAGGGACAAAAGTGAGATCAGATAGGAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp CTCCTCCTATCTGATCTCACTTTTGTCCCTGTCGTCTATTGGTTTTTATCAACGAAGAGAATCCAGCCCTaGCAGGGGTCTCCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: LLLSDLTFVPVVYWFLSTKRIQP*QGSPWA
Trigger: TGCCCAAGGAGACCCCTGCCAGGGCTGGATTCTCTT...CGTTGATAAAAACCAATAGACGACAGGGACAAAAGTGAGATCAGATAGGAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp CCCCCTTCTGCTAGGTTAGTCTCACTCAGTGTTCCCTACTACAGACAAAGATGTGAAACAGGGTCTGTTTaGAAGAGAATCCAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: PPSARLVSLSVPYYRQRCETGSV*KRIQPW
Trigger: CCAGGGCTGGATTCTCTTCCAAACAGACCCTGTTTC...ACATCTTTGTCTGTAGTAGGGAACACTGAGTGAGACTAACCTAGCAGAAGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp ACATTTCAATCCTGGCTGAATGAAATGGCACATAACGGTCTTGGGGAGAAGCAAGTGTTGGGCAGGGCGTaGAACACGTTGTGTCGGATT +
Preference number: 4 (lower is better)
Translates to: TFQSWLNEMAHNGLGEKQVLGRA*NTLCRI
Trigger: AATCCGACACAACGTGTTCCACGCCCTGCCCAACAC...TTGCTTCTCCCCAAGACCGTTATGTGCCATTTCATTCAGCCAGGATTGAAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp ACATTTCAATCCTGGCTGAATGAAATGGCACATAACGGTCTTGGGGAGAAGCAATCTGTGGGGGATCCTTaGAGACACCTTCAAGGTCAC +
Preference number: 4 (lower is better)
Translates to: TFQSWLNEMAHNGLGEKQSVGDP*RHLQGH
Trigger: GTGACCTTGAAGGTGTCTTCAAGGATCCCCCACAGA...TTGCTTCTCCCCAAGACCGTTATGTGCCATTTCATTCAGCCAGGATTGAAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp GTCTGTAAAAGCAGGTCTCAGCTAAAGCTCTCCACCGATCGTAAGCATTACCAATGCAGTTCTCAGAGGTaGTGTAGAAGCTTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: VCKSRSQLKLSTDRKHYQCSSQR*CRSFPL
Trigger: CAGAGGGAAGCTTCTACATCACCTCTGAGAACTGCA...TTGGTAATGCTTACGATCGGTGGAGAGCTTTAGCTGAGACCTGCTTTTACAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395297.6
ENST00000482951.6
CDS-3UTR TCA 90 bp CTGTCTTACTTATCCCTACTGTCCAGGTTCATTCATCTCTTCCATACAACGAAACTGGGATGTCCCGCATaGTCACCAGGAAGTGGAGAC +
Preference number: 4 (lower is better)
Translates to: LSYLSLLSRFIHLFHTTKLGCPA*SPGSGD
Trigger: GTCTCCACTTCCTGGTGATCATGCGGGACATCCCAG...TTTCGTTGTATGGAAGAGATGAATGAACCTGGACAGTAGGGATAAGTAAGACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR TCA 90 bp GATGATGTTGCCAAGAGAATGGCCAATGAAGCTAATTCGGGATATGGAGAGGTTTGTGGTGTTCCTGGGTaGGATAAGTGGTCACTTGGG +
Preference number: 4 (lower is better)
Translates to: DDVAKRMANEANSGYGEVCGVPG*DKWSLG
Trigger: CCCAAGTGACCACTTATCTCACCCAGGAACACCACA...AACCTCTCCATATCCCGAATTAGCTTCATTGGCCATTCTCTTGGCAACATCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp CTCCTCCTATCTGATCTCACTTTTGTCCCTGTCGTCTATTGGTTTTTATCAACGCTCCTACTCTCATGCTaGGCATTGAAGGCCACCAGG +
Preference number: 4 (lower is better)
Translates to: LLLSDLTFVPVVYWFLSTLLLSC*ALKATR
Trigger: CCTGGTGGCCTTCAATGCTCAGCATGAGAGTAGGAG...CGTTGATAAAAACCAATAGACGACAGGGACAAAAGTGAGATCAGATAGGAGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR TCA 90 bp GCATTATCCCTGAAGGTCAGCTGCAGTAGAGACCCGGATTTCTTCAGTTTCTGCACCATCTTCCCCTCTTaGTCTATTCCCTTTCCTAGA +
Preference number: 4 (lower is better)
Translates to: ALSLKVSCSRDPDFFSFCTIFPS*SIPFPR
Trigger: TCTAGGAAAGGGAATAGATCAAGAGGGGAAGATGGT...GCAGAAACTGAAGAAATCCGGGTCTCTACTGCAGCTGACCTTCAGGGATAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp ATTGAGAACCCTGGTCCTAGATGCGTTTCCACACTTCAGAAGGGATTTTTGCAGTCCTGCTCTTCTGTGTaGGAGTCCTTTAGGGAAGAC +
Preference number: 4 (lower is better)
Translates to: IENPGPRCVSTLQKGFLQSCSSV*ESFRED
Trigger: GTCTTCCCTAAAGGACTCTCACACAGAAGAGCAGGA...CTGCAAAAATCCCTTCTGAAGTGTGGAAACGCATCTAGGACCAGGGTTCTCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR TCA 90 bp CCGTGTGAGGACCGATCGGATGATGATGTTGCCAAGAGAATGGCCAATGAAGCTATCAGATATGATGGATaGAGATCTCTTGATGACCCC +
Preference number: 4 (lower is better)
Translates to: PCEDRSDDDVAKRMANEAIRYDG*RSLDDP
Trigger: GGGGTCATCAAGAGATCTTCATCCATCATATCTGAT...AGCTTCATTGGCCATTCTCTTGGCAACATCATCATCCGATCGGTCCTCACACGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp TTATCCCTGAAGGTCAGCTGCAGTAGAGACCCGGATTTCTTCAGTTTCTGCATGCTTGCTGTGCATATCTaGAGGTTCAGCAAAACCTCC +
Preference number: 4 (lower is better)
Translates to: LSLKVSCSRDPDFFSFCMLAVHI*RFSKTS
Trigger: GGAGGTTTTGCTGAACCTTCAGATATGCACAGCAAG...CATGCAGAAACTGAAGAAATCCGGGTCTCTACTGCAGCTGACCTTCAGGGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp TCGGATGATGATGTTGCCAAGAGAATGGCCAATGAAGCTAATTCGGGATATGGATCCTCAAGTGCTCTATaGAGAGATCTGGTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: SDDDVAKRMANEANSGYGSSSAL*RDLVLG
Trigger: CCCCAGGACCAGATCTCTTCATAGAGCACTTGAGGA...TCCATATCCCGAATTAGCTTCATTGGCCATTCTCTTGGCAACATCATCATCCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp GATGATGTTGCCAAGAGAATGGCCAATGAAGCTAATTCGGGATATGGAGAGGTTGATGGCATCAGCAGCTaGCGTACAGCTCAATTCAGG +
Preference number: 4 (lower is better)
Translates to: DDVAKRMANEANSGYGEVDGISS*RTAQFR
Trigger: CCTGAATTGAGCTGTACGTCAGCTGCTGATGCCATC...AACCTCTCCATATCCCGAATTAGCTTCATTGGCCATTCTCTTGGCAACATCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp ACATTTCAATCCTGGCTGAATGAAATGGCACATAACGGTCTTGGGGAGAAGCAAGGAGCCCCAGTTCTATaGAAGTCTTTACCAGCCGGA +
Preference number: 4 (lower is better)
Translates to: TFQSWLNEMAHNGLGEKQGAPVL*KSLPAG
Trigger: TCCGGCTGGTAAAGACTTTCATAGAACTGGGGCTCC...TTGCTTCTCCCCAAGACCGTTATGTGCCATTTCATTCAGCCAGGATTGAAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp TCGGATGATGATGTTGCCAAGAGAATGGCCAATGAAGCTAATTCGGGATATGGAACGTGTGGAGTTTGTTaGGGTAATACCGGAACCGGG +
Preference number: 4 (lower is better)
Translates to: SDDDVAKRMANEANSGYGTCGVC*GNTGTG
Trigger: CCCGGTTCCGGTATTACCTCAACAAACTCCACACGT...TCCATATCCCGAATTAGCTTCATTGGCCATTCTCTTGGCAACATCATCATCCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp CTCCTCCTATCTGATCTCACTTTTGTCCCTGTCGTCTATTGGTTTTTATCAACGGTGAGGCCCAGAGAGTaGCAGGAACGTGTGGAGTTT +
Preference number: 4 (lower is better)
Translates to: LLLSDLTFVPVVYWFLSTVRPRE*QERVEF
Trigger: AAACTCCACACGTTCCTGTCACTCTCTGGGCCTCAC...CGTTGATAAAAACCAATAGACGACAGGGACAAAAGTGAGATCAGATAGGAGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR TCA 90 bp ACATTTCAATCCTGGCTGAATGAAATGGCACATAACGGTCTTGGGGAGAAGCAACTCCAGGAAGAGTTCTaGATCCAGCACAGCGATGTG +
Preference number: 4 (lower is better)
Translates to: TFQSWLNEMAHNGLGEKQLQEEF*IQHSDV
Trigger: CACATCGCTGTGCTGGATTCAGAACTCTTCCTGGAG...TTGCTTCTCCCCAAGACCGTTATGTGCCATTTCATTCAGCCAGGATTGAAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp TCAGTGCCCCCTTCTGCTAGGTTAGTCTCACTCAGTGTTCCCTACTACAGACAATGTTCTCCTCCTATCTaGTCTCACTTTTGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: SVPPSARLVSLSVPYYRQCSPPI*SHFCPC
Trigger: ACAGGGACAAAAGTGAGATCAGATAGGAGGAGAACA...TTGTCTGTAGTAGGGAACACTGAGTGAGACTAACCTAGCAGAAGGGGGCACTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR GCA 90 bp CTGTCTTACTTATCCCTACTGTCCAGGTTCATTCATCTCTTCCATACAACGAAACTGAATGCAGGCTGCTaGTCTCTGTCTGCCCAGCGA +
Preference number: 4 (lower is better)
Translates to: LSYLSLLSRFIHLFHTTKLNAGC*SLSAQR
Trigger: TCGCTGGGCAGACAGAGAGCAGCAGCCTGCATTCAG...TTTCGTTGTATGGAAGAGATGAATGAACCTGGACAGTAGGGATAAGTAAGACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR GCA 90 bp AGTCACTTACCAATAACAGCTTATGTTGAGTCTTCAGTCTGGTTGTTCTCCTCCTGGACACAGGCTGAATaGAGGCTGCTGCTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: SHLPITAYVESSVWLFSSWTQAE*RLLLSV
Trigger: GACAGAGAGCAGCAGCCTGCATTCAGCCTGTGTCCA...GGAGGAGAACAACCAGACTGAAGACTCAACATAAGCTGTTATTGGTAAGTGACT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR GCA 90 bp AGTCACTTACCAATAACAGCTTATGTTGAGTCTTCAGTCTGGTTGTTCTCCTCCATTACCTGTCTCCACTaGAGGGCTCCCCTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: SHLPITAYVESSVWLFSSITCLH*RAPLSL
Trigger: GAGAGAGAGGGGAGCCCTGCAGTGGAGACAGGTAAT...GGAGGAGAACAACCAGACTGAAGACTCAACATAAGCTGTTATTGGTAAGTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR GCA 90 bp ACTGGATATGTCCCAGCATCAGATGTTTGGCCAGTCCAACATTCATCTTCAGGCCACCTACTACCACTTTaGTTAGCCCAGTCCTGTCTA +
Preference number: 4 (lower is better)
Translates to: TGYVPASDVWPVQHSSSGHLLPL*LAQSCL
Trigger: TAGACAGGACTGGGCTAAGCAAAGTGGTAGTAGGTG...GCCTGAAGATGAATGTTGGACTGGCCAAACATCTGATGCTGGGACATATCCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR GCA 90 bp CCCCCAGCATTAACTACCTGTGGTTTCCTTTTACCTAATTCGGGATATGGAGAGCTTCGAACAAACGGGTaGAAGACTTCCCGATCACTG +
Preference number: 4 (lower is better)
Translates to: PPALTTCGFLLPNSGYGELRTNG*KTSRSL
Trigger: CAGTGATCGGGAAGTCTTGCACCCGTTTGTTCGAAG...CTCTCCATATCCCGAATTAGGTAAAAGGAAACCACAGGTAGTTAATGCTGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR GCA 90 bp TGCAGTAGAGACCCGGATTTCTTCAGTTTCTGCATGAGCCATAAGCCTGTACTACTTCGAACAAACGGGTaGAAGACTTCCCGATCACTG +
Preference number: 4 (lower is better)
Translates to: CSRDPDFFSFCMSHKPVLLRTNG*KTSRSL
Trigger: CAGTGATCGGGAAGTCTTGCACCCGTTTGTTCGAAG...TAGTACAGGCTTATGGCTCATGCAGAAACTGAAGAAATCCGGGTCTCTACTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR GCA 90 bp ACACTCCTGCAAAGCTGCCCATCTGGACTCATTCCCATGGTCTGCTTTTATTTTGCAAAACCTCCATCTTaGTGCTTGGTGTCCGCATCT +
Preference number: 4 (lower is better)
Translates to: TLLQSCPSGLIPMVCFYFAKPPS*CLVSAS
Trigger: AGATGCGGACACCAAGCAGCAAGATGGAGGTTTTGC...AAAATAAAAGCAGACCATGGGAATGAGTCCAGATGGGCAGCTTTGCAGGAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR GCA 90 bp CCCCCAGCATTAACTACCTGTGGTTTCCTTTTACCTAATTCGGGATATGGAGAGGCAAAACCTCCATCTTaGTGCTTGGTGTCCGCATCT +
Preference number: 4 (lower is better)
Translates to: PPALTTCGFLLPNSGYGEAKPPS*CLVSAS
Trigger: AGATGCGGACACCAAGCAGCAAGATGGAGGTTTTGC...CTCTCCATATCCCGAATTAGGTAAAAGGAAACCACAGGTAGTTAATGCTGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR GCA 90 bp ATTGAGAACCCTGGTCCTAGATGCGTTTCCACACTTCAGAAGGGATTTTTGCAGATGTATCCGGGGCCCTaGTGGTTGTCAGCATCTAAA +
Preference number: 4 (lower is better)
Translates to: IENPGPRCVSTLQKGFLQMYPGP*WLSASK
Trigger: TTTAGATGCTGACAACCAGCAGGGCCCCGGATACAT...CTGCAAAAATCCCTTCTGAAGTGTGGAAACGCATCTAGGACCAGGGTTCTCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR GCA 90 bp CGTGTGAGGACCGATCGGATGATGATGTTGCCAAGAGAATGGCCAATGAAGCTATGGGGTTTCCTCAAGTaGTCTATGAAGAGATCTGGT +
Preference number: 4 (lower is better)
Translates to: RVRTDRMMMLPREWPMKLWGFLK*SMKRSG
Trigger: ACCAGATCTCTTCATAGAGCACTTGAGGAAACCCCA...TAGCTTCATTGGCCATTCTCTTGGCAACATCATCATCCGATCGGTCCTCACACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR GCA 90 bp TCAGTGCCCCCTTCTGCTAGGTTAGTCTCACTCAGTGTTCCCTACTACAGACAACATGATGGAAGTGCCTaGCTTCAGCTCTTGGTTTTT +
Preference number: 4 (lower is better)
Translates to: SVPPSARLVSLSVPYYRQHDGSA*LQLLVF
Trigger: AAAAACCAAGAGCTGAAGGCAGGCACTTCCATCATG...TTGTCTGTAGTAGGGAACACTGAGTGAGACTAACCTAGCAGAAGGGGGCACTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR GCA 90 bp TCAGCATTATCCCTGAAGGTCAGCTGCAGTAGAGACCCGGATTTCTTCAGTTTCGGAGACAGGTGGCAGTaGAAGACACAGATAAGTTCA +
Preference number: 4 (lower is better)
Translates to: SALSLKVSCSRDPDFFSFGDRWQ*KTQISS
Trigger: TGAACTTATCTGTGTCTTGCACTGCCACCTGTCTCC...GAAACTGAAGAAATCCGGGTCTCTACTGCAGCTGACCTTCAGGGATAATGCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR GCA 90 bp TCGGATGATGATGTTGCCAAGAGAATGGCCAATGAAGCTAATTCGGGATATGGATCCCTGAAGGTCAGCTaGAGTAGAGACCCGGATTTC +
Preference number: 4 (lower is better)
Translates to: SDDDVAKRMANEANSGYGSLKVS*SRDPDF
Trigger: GAAATCCGGGTCTCTACTGCAGCTGACCTTCAGGGA...TCCATATCCCGAATTAGCTTCATTGGCCATTCTCTTGGCAACATCATCATCCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR GCA 90 bp TCAGTGCCCCCTTCTGCTAGGTTAGTCTCACTCAGTGTTCCCTACTACAGACAACACAATACCATGTGCTaGACGACTAGGGAACAAATG +
Preference number: 4 (lower is better)
Translates to: SVPPSARLVSLSVPYYRQHNTMC*TTREQM
Trigger: CATTTGTTCCCTAGTCGTGCAGCACATGGTATTGTG...TTGTCTGTAGTAGGGAACACTGAGTGAGACTAACCTAGCAGAAGGGGGCACTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp CTTATCCCTACTGTCCAGGTTCATTCATCTCTTCCATACAACGAAATGATTCTTCTGTCTGCCCAGCGATaGAGGCACTCAGTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: LIPTVQVHSSLPYNEMILLSAQR*RHSVCG
Trigger: CCCACAGACTGAGTGCCTCCATCGCTGGGCAGACAG...AAGAATCATTTCGTTGTATGGAAGAGATGAATGAACCTGGACAGTAGGGATAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp ACACTCCTGCAAAGCTGCCCATCTGGACTCATTCCCATGGTCTGCTTTTATTTTATATCCAGGGACAGCTaGCTGTGCGTCTGTATCAGA +
Preference number: 4 (lower is better)
Translates to: TLLQSCPSGLIPMVCFYFISRDS*LCVCIR
Trigger: TCTGATACAGACGCACAGCCAGCTGTCCCTGGATAT...AAAATAAAAGCAGACCATGGGAATGAGTCCAGATGGGCAGCTTTGCAGGAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp AGTATCCACATCTGCCACTGGATATGTCCCAGCATCAGATGTTTGGCCAGTCCACCATATGATTTTGTGTaGCCACATTCTCACCTGGCT +
Preference number: 4 (lower is better)
Translates to: SIHICHWICPSIRCLASPPYDFV*PHSHLA
Trigger: AGCCAGGTGAGAATGTGGCCACACAAAATCATATGG...TGGACTGGCCAAACATCTGATGCTGGGACATATCCAGTGGCAGATGTGGATACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR CCA 90 bp CCCCCTTCTGCTAGGTTAGTCTCACTCAGTGTTCCCTACTACAGACAAAGATGTTCCATCCTCTGGACCTaGACTCCTTCTAGAAGTATC +
Preference number: 4 (lower is better)
Translates to: PPSARLVSLSVPYYRQRCSILWT*TPSRSI
Trigger: GATACTTCTAGAAGGAGTCCAGGTCCAGAGGATGGA...ACATCTTTGTCTGTAGTAGGGAACACTGAGTGAGACTAACCTAGCAGAAGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp ACACTCCTGCAAAGCTGCCCATCTGGACTCATTCCCATGGTCTGCTTTTATTTTTCTGGGCTACTGATGTaGGGAGCAGATACAGACTTG +
Preference number: 4 (lower is better)
Translates to: TLLQSCPSGLIPMVCFYFSGLLM*GADTDL
Trigger: CAAGTCTGTATCTGCTCCCCACATCAGTAGCCCAGA...AAAATAAAAGCAGACCATGGGAATGAGTCCAGATGGGCAGCTTTGCAGGAGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp GTGAGGACCGATCGGATGATGATGTTGCCAAGAGAATGGCCAATGAAGCTAATTTCTGGGCTACTGATGTaGGGAGCAGATACAGACTTG +
Preference number: 4 (lower is better)
Translates to: VRTDRMMMLPREWPMKLISGLLM*GADTDL
Trigger: CAAGTCTGTATCTGCTCCCCACATCAGTAGCCCAGA...AATTAGCTTCATTGGCCATTCTCTTGGCAACATCATCATCCGATCGGTCCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp ATTGAGAACCCTGGTCCTAGATGCGTTTCCACACTTCAGAAGGGATTTTTGCAGGATCCTGGGGAACCTTaGCTCTTGCTGTGCATATCT +
Preference number: 4 (lower is better)
Translates to: IENPGPRCVSTLQKGFLQDPGEP*LLLCIS
Trigger: AGATATGCACAGCAAGAGCCAAGGTTCCCCAGGATC...CTGCAAAAATCCCTTCTGAAGTGTGGAAACGCATCTAGGACCAGGGTTCTCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp CCCCCTTCTGCTAGGTTAGTCTCACTCAGTGTTCCCTACTACAGACAAAGATGTTTTGGTTTCAACACCTaGAGTGTTCTCAGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: PPSARLVSLSVPYYRQRCFGFNT*SVLSPA
Trigger: GGCAGGACTGAGAACACTCCAGGTGTTGAAACCAAA...ACATCTTTGTCTGTAGTAGGGAACACTGAGTGAGACTAACCTAGCAGAAGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp GTGCAAGACACAGATAAGTTCACAACCTCCACAGCCTTCAGGCTGTCCAGAGTATCCAACGTGCTGGAATaGGTAGAAACAACTCCAAAG +
Preference number: 4 (lower is better)
Translates to: VQDTDKFTTSTAFRLSRVSNVLE*VETTPK
Trigger: CTTTGGAGTTGTTTCTACCCATTCCAGCACGTTGGA...TACTCTGGACAGCCTGAAGGCTGTGGAGGTTGTGAACTTATCTGTGTCTTGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR CCA 90 bp TGGCTGAATGAAATGGCACATAACGGTCTTGGGGAGAAGCAACCAGCACGACGTCATTTCTGCATAAACTaGCCCTGTGTGTCTGTCTTT +
Preference number: 4 (lower is better)
Translates to: WLNEMAHNGLGEKQPARRHFCIN*PCVSVF
Trigger: AAAGACAGACACACAGGGCCAGTTTATGCAGAAATG...ACGTCGTGCTGGTTGCTTCTCCCCAAGACCGTTATGTGCCATTTCATTCAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp CTCCTCCTATCTGATCTCACTTTTGTCCCTGTCGTCTATTGGTTTTTATCAACGTTCCGGTATAAGATCTaGAAGACCCGGCTGTGCACG +
Preference number: 4 (lower is better)
Translates to: LLLSDLTFVPVVYWFLSTFRYKI*KTRLCT
Trigger: CGTGCACAGCCGGGTCTTTCAGATCTTATACCGGAA...CGTTGATAAAAACCAATAGACGACAGGGACAAAAGTGAGATCAGATAGGAGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR TCA 90 bp AGATGTACTTTCTACACAATTATAATAGATGCTCAGAGGCCAGAGAGGGTTTACCTTGGGAGTGCAGAGTaGCTGTGTCCAGGAACTGGG +
Preference number: 4 (lower is better)
Translates to: RCTFYTIIIDAQRPERVYLGSAE*LCPGTG
Trigger: CCCAGTTCCTGGACACAGTCACTCTGCACTCCCAAG...GTAAACCCTCTCTGGCCTCTGAGCATCTATTATAATTGTGTAGAAAGTACATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR TCA 90 bp TCAGTGCCCCCTTCTGCTAGGTTAGTCTCACTCAGTGTTCCCTACTACAGACAAATCAGATATGATGGATaGAGATCTCTTGATGACCCC +
Preference number: 4 (lower is better)
Translates to: SVPPSARLVSLSVPYYRQIRYDG*RSLDDP
Trigger: GGGGTCATCAAGAGATCTTCATCCATCATATCTGAT...TTGTCTGTAGTAGGGAACACTGAGTGAGACTAACCTAGCAGAAGGGGGCACTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR TCA 90 bp AAAGTGCAGTCCTTGGCTTCAACCAGAGGGCCCAGGAGGTTGTTGATCATTTCTTTGGAAAGAGCTTGCTaGCCCACATTCAAGTCTTTA +
Preference number: 4 (lower is better)
Translates to: KVQSLASTRGPRRLLIISLERAC*PTFKSL
Trigger: TAAAGACTTGAATGTGGGTCAGCAAGCTCTTTCCAA...AGAAATGATCAACAACCTCCTGGGCCCTCTGGTTGAAGCCAAGGACTGCACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp TGCAGTAGAGACCCGGATTTCTTCAGTTTCTGCATGAGCCATAAGCCTGTACTAATCCATAATGCAAGGTaGACCGCTTTGGCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: CSRDPDFFSFCMSHKPVLIHNAR*TALALL
Trigger: CAGCAAAGCCAAAGCGGTTCACCTTGCATTATGGAT...TAGTACAGGCTTATGGCTCATGCAGAAACTGAAGAAATCCGGGTCTCTACTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp CTTCATTCCGGTATAAGATCTGAAAGACCCGGCTGTGCACGGTGCTGTCATGGAACACAGACAACCAGGTaGATTCCATCTTCCAAATTT +
Preference number: 4 (lower is better)
Translates to: LHSGIRSERPGCARCCHGTQTTR*IPSSKF
Trigger: AAATTTGGAAGATGGAATTCACCTGGTTGTCTGTGT...TCCATGACAGCACCGTGCACAGCCGGGTCTTTCAGATCTTATACCGGAATGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR TCA 90 bp GTGAGGACCGATCGGATGATGATGTTGCCAAGAGAATGGCCAATGAAGCTAATTAATCAGCATTATCCCTaGAGGTCAGCTGCAGTAGAG +
Preference number: 4 (lower is better)
Translates to: VRTDRMMMLPREWPMKLINQHYP*RSAAVE
Trigger: CTCTACTGCAGCTGACCTTCAGGGATAATGCTGATT...AATTAGCTTCATTGGCCATTCTCTTGGCAACATCATCATCCGATCGGTCCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp ACCTTTACCAAGCCAGGAGCCTCTTCCTGGACGAGTAAAACTGATCAATGGCTGCATTTCAATCCTGGCTaGATGAAATGGCACATAACG +
Preference number: 4 (lower is better)
Translates to: TFTKPGASSWTSKTDQWLHFNPG*MKWHIT
Trigger: CGTTATGTGCCATTTCATTCAGCCAGGATTGAAATG...CAGCCATTGATCAGTTTTACTCGTCCAGGAAGAGGCTCCTGGCTTGGTAAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR TCA 90 bp ACACTCCTGCAAAGCTGCCCATCTGGACTCATTCCCATGGTCTGCTTTTATTTTATACAGCACTCCTCATaGAGAACCAGAGTCTATGCC +
Preference number: 4 (lower is better)
Translates to: TLLQSCPSGLIPMVCFYFIQHSS*RTRVYA
Trigger: GGCATAGACTCTGGTTCTTCATGAGGAGTGCTGTAT...AAAATAAAAGCAGACCATGGGAATGAGTCCAGATGGGCAGCTTTGCAGGAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR TCA 90 bp TCAGTGCCCCCTTCTGCTAGGTTAGTCTCACTCAGTGTTCCCTACTACAGACAAAAAAGCCTTTTCAAATaGGGCATGACACGCAACACT +
Preference number: 4 (lower is better)
Translates to: SVPPSARLVSLSVPYYRQKSLFK*GMTRNT
Trigger: AGTGTTGCGTGTCATGCCTCATTTGAAAAGGCTTTT...TTGTCTGTAGTAGGGAACACTGAGTGAGACTAACCTAGCAGAAGGGGGCACTGA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR GCA 90 bp GCCAATGAAGCTAATTCGGGATATGGAGAGGTTGTACAACTGAATGTGTTGAATTCGGTGCCACTTGTGTaGGTGCTGCATGCAGTTCTC +
Preference number: 4 (lower is better)
Translates to: ANEANSGYGEVVQLNVLNSVPLV*VLHAVL
Trigger: GAGAACTGCATGCAGCACGCACACAAGTGGCACCGA...ATTCAACACATTCAGTTGTACAACCTCTCCATATCCCGAATTAGCTTCATTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR GCA 90 bp CCCCCTTCTGCTAGGTTAGTCTCACTCAGTGTTCCCTACTACAGACAAAGATGTAGATCCTTGCTTATCTaGTCAGCGATCTTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: PPSARLVSLSVPYYRQRCRSLLI*SAIFSG
Trigger: TCCAGAGAAGATCGCTGAGCAGATAAGCAAGGATCT...ACATCTTTGTCTGTAGTAGGGAACACTGAGTGAGACTAACCTAGCAGAAGGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR GCA 90 bp CCGTGTGAGGACCGATCGGATGATGATGTTGCCAAGAGAATGGCCAATGAAGCTATCTTCAGGCACACCTaGTTTGTTTTGAAATTCACC +
Preference number: 4 (lower is better)
Translates to: PCEDRSDDDVAKRMANEAIFRHT*FVLKFT
Trigger: GGTGAATTTCAAAACAAAGCAGGTGTGCCTGAAGAT...AGCTTCATTGGCCATTCTCTTGGCAACATCATCATCCGATCGGTCCTCACACGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR GCA 90 bp GTCTGTAAAAGCAGGTCTCAGCTAAAGCTCTCCACCGATCGTAAGCATTACCAACCTTGGCTCTTGCTGTaGATATCTGAAGGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: VCKSRSQLKLSTDRKHYQPWLLL*ISEGSA
Trigger: TGCTGAACCTTCAGATATGCACAGCAAGAGCCAAGG...TTGGTAATGCTTACGATCGGTGGAGAGCTTTAGCTGAGACCTGCTTTTACAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395297.6
ENST00000482951.6
CDS-3UTR GCA 90 bp ACACTCCTGCAAAGCTGCCCATCTGGACTCATTCCCATGGTCTGCTTTTATTTTGGGAACCTTGGCTCTTaGTGTGCATATCTGAAGGTT +
Preference number: 4 (lower is better)
Translates to: TLLQSCPSGLIPMVCFYFGNLGS*CAYLKV
Trigger: AACCTTCAGATATGCACAGCAAGAGCCAAGGTTCCC...AAAATAAAAGCAGACCATGGGAATGAGTCCAGATGGGCAGCTTTGCAGGAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR GCA 90 bp AATTCGGGATATGGAGAGGTTGTACAACTGAATGTGTTGAATGATTTCATCCAATACCAGCCGGAGGTCTaGACTGTTCCCATCCAGGCC +
Preference number: 4 (lower is better)
Translates to: NSGYGEVVQLNVLNDFIQYQPEV*TVPIQA
Trigger: GGCCTGGATGGGAACAGTGCAGACCTCCGGCTGGTA...TTGGATGAAATCATTCAACACATTCAGTTGTACAACCTCTCCATATCCCGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276737.10
ENST00000467365.1
ENST00000482951.6
CDS-3UTR GCA 90 bp CCCCCTTCTGCTAGGTTAGTCTCACTCAGTGTTCCCTACTACAGACAAAGATGTCCAGAAAGGAGAAGCTaGTACCAACTTATGGTTCTG +
Preference number: 4 (lower is better)
Translates to: PPSARLVSLSVPYYRQRCPERRS*YQLMVL
Trigger: CAGAACCATAAGTTGGTAGCAGCTTCTCCTTTCTGG...ACATCTTTGTCTGTAGTAGGGAACACTGAGTGAGACTAACCTAGCAGAAGGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR GCA 90 bp ACACTCCTGCAAAGCTGCCCATCTGGACTCATTCCCATGGTCTGCTTTTATTTTAAAAGAGGTGCACCATaGAGCTGGACGTTTATTGCC +
Preference number: 4 (lower is better)
Translates to: TLLQSCPSGLIPMVCFYFKRGAP*SWTFIA
Trigger: GGCAATAAACGTCCAGCTGCATGGTGCACCTCTTTT...AAAATAAAAGCAGACCATGGGAATGAGTCCAGATGGGCAGCTTTGCAGGAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp TCCTCATCCAACGTGCTGGAATGGGTAGAAACAACTCCAAAGGATCCCAAAGGCATTCTCACCTGGCTCTaGACACCTTATAACTTCTTC +
Preference number: 4 (lower is better)
Translates to: SSSNVLEWVETTPKDPKGILTWL*TPYNFF
Trigger: GAAGAAGTTATAAGGTGTCCAGAGCCAGGTGAGAAT...GCCTTTGGGATCCTTTGGAGTTGTTTCTACCCATTCCAGCACGTTGGATGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR CCA 90 bp ATGATGATGTTGCCAAGAGAATGGCCAATGAAGCTAATTCGGGATATGGAGAGGGGCCACATTCTCACCTaGCTCTGGACACCTTATAAC +
Preference number: 4 (lower is better)
Translates to: MMMLPREWPMKLIRDMERGHILT*LWTPYN
Trigger: GTTATAAGGTGTCCAGAGCCAGGTGAGAATGTGGCC...CCTCTCCATATCCCGAATTAGCTTCATTGGCCATTCTCTTGGCAACATCATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp CTTCCCCCAGCATTAACTACCTGTGGTTTCCTTTTACCTAATTCGGGATATGGATCTGGGCTACTGATGTaGGGAGCAGATACAGACTTG +
Preference number: 4 (lower is better)
Translates to: LPPALTTCGFLLPNSGYGSGLLM*GADTDL
Trigger: CAAGTCTGTATCTGCTCCCCACATCAGTAGCCCAGA...TCCATATCCCGAATTAGGTAAAAGGAAACCACAGGTAGTTAATGCTGGGGGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR CCA 90 bp TCGGATGATGATGTTGCCAAGAGAATGGCCAATGAAGCTAATTCGGGATATGGATTGAGAGCAAGATCCTaGGGAACCTTGGCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: SDDDVAKRMANEANSGYGLRARS*GTLALA
Trigger: AGCAAGAGCCAAGGTTCCCCAGGATCTTGCTCTCAA...TCCATATCCCGAATTAGCTTCATTGGCCATTCTCTTGGCAACATCATCATCCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp CTCCTCCTATCTGATCTCACTTTTGTCCCTGTCGTCTATTGGTTTTTATCAACGATCTCCACCAGGGGATaGTCTGCTCCAGCATCTGTT +
Preference number: 4 (lower is better)
Translates to: LLLSDLTFVPVVYWFLSTISTRG*SAPASV
Trigger: AACAGATGCTGGAGCAGACCATCCCCTGGTGGAGAT...CGTTGATAAAAACCAATAGACGACAGGGACAAAAGTGAGATCAGATAGGAGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp GATGATGTTGCCAAGAGAATGGCCAATGAAGCTAATTCGGGATATGGAGAGGTTTATCCGGGGCCCTGCTaGTTGTCAGCATCTAAAACT +
Preference number: 4 (lower is better)
Translates to: DDVAKRMANEANSGYGEVYPGPC*LSASKT
Trigger: AGTTTTAGATGCTGACAACCAGCAGGGCCCCGGATA...AACCTCTCCATATCCCGAATTAGCTTCATTGGCCATTCTCTTGGCAACATCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp CTTCCCCCAGCATTAACTACCTGTGGTTTCCTTTTACCTAATTCGGGATATGGACTGAGATGCCACTGTTaGAAAGAGCTTGCTGACCCA +
Preference number: 4 (lower is better)
Translates to: LPPALTTCGFLLPNSGYGLRCHC*KELADP
Trigger: TGGGTCAGCAAGCTCTTTCCAACAGTGGCATCTCAG...TCCATATCCCGAATTAGGTAAAAGGAAACCACAGGTAGTTAATGCTGGGGGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR CCA 90 bp ACATTTCAATCCTGGCTGAATGAAATGGCACATAACGGTCTTGGGGAGAAGCAACTGAGATGCCACTGTTaGAAAGAGCTTGCTGACCCA +
Preference number: 4 (lower is better)
Translates to: TFQSWLNEMAHNGLGEKQLRCHC*KELADP
Trigger: TGGGTCAGCAAGCTCTTTCCAACAGTGGCATCTCAG...TTGCTTCTCCCCAAGACCGTTATGTGCCATTTCATTCAGCCAGGATTGAAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp TCGGATGATGATGTTGCCAAGAGAATGGCCAATGAAGCTAATTCGGGATATGGAGAAACAGGGTCTGTTTaGAAGAGAATCCAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: SDDDVAKRMANEANSGYGETGSV*KRIQPW
Trigger: CCAGGGCTGGATTCTCTTCCAAACAGACCCTGTTTC...TCCATATCCCGAATTAGCTTCATTGGCCATTCTCTTGGCAACATCATCATCCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp TTGTGTCGGATTAAAGTGCAGTCCTTGGCTTCAACCAGAGGGCCCAGGAGGTTGTACACATTTCAATCCTaGCTGAATGAAATGGCACAT +
Preference number: 4 (lower is better)
Translates to: LCRIKVQSLASTRGPRRLYTFQS*LNEMAH
Trigger: ATGTGCCATTTCATTCAGCCAGGATTGAAATGTGTA...CAACCTCCTGGGCCCTCTGGTTGAAGCCAAGGACTGCACTTTAATCCGACACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp CTTATCCCTACTGTCCAGGTTCATTCATCTCTTCCATACAACGAAATGATTCTTCGGTTGCTATGGTTATaGAACCCCGCAACTGCCCCC +
Preference number: 4 (lower is better)
Translates to: LIPTVQVHSSLPYNEMILRLLWL*NPATAP
Trigger: GGGGGCAGTTGCGGGGTTCCATAACCATAGCAACCG...AAGAATCATTTCGTTGTATGGAAGAGATGAATGAACCTGGACAGTAGGGATAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp GTCTGTAAAAGCAGGTCTCAGCTAAAGCTCTCCACCGATCGTAAGCATTACCAAGCTGCTACCAACTTATaGTTCTGTACTGAGCATGGG +
Preference number: 4 (lower is better)
Translates to: VCKSRSQLKLSTDRKHYQAATNL*FCTEHG
Trigger: CCCATGCTCAGTACAGAACCATAAGTTGGTAGCAGC...TTGGTAATGCTTACGATCGGTGGAGAGCTTTAGCTGAGACCTGCTTTTACAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp CTCCTCCTATCTGATCTCACTTTTGTCCCTGTCGTCTATTGGTTTTTATCAACGACAGGGCCCATCATTTaGCCAGAAAGGAGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: LLLSDLTFVPVVYWFLSTTGPII*PERRSC
Trigger: GCAGCTTCTCCTTTCTGGCCAAATGATGGGCCCTGT...CGTTGATAAAAACCAATAGACGACAGGGACAAAAGTGAGATCAGATAGGAGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395297.6
3UTR CAA 72 bp TCAATGCCTGAATCAGATATGATGGATGAAGATCTCTaGATGACCCCGGATAGCACTGAGAGTTCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: SMPESDMMDEDL*MTPDSTESSSC
Trigger: GCAGGAGGAACTCTCAGTGCTATCCGGGGTCATCAAGAGATCTTCATCCATCATATCTGATTCAGGCATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR TCA 90 bp CTGTCTTACTTATCCCTACTGTCCAGGTTCATTCATCTCTTCCATACAACGAAATCTGTGGGGGATCCTTaGAGACACCTTCAAGGTCAC +
Preference number: 4 (lower is better)
Translates to: LSYLSLLSRFIHLFHTTKSVGDP*RHLQGH
Trigger: GTGACCTTGAAGGTGTCTTCAAGGATCCCCCACAGA...TTTCGTTGTATGGAAGAGATGAATGAACCTGGACAGTAGGGATAAGTAAGACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR TCA 90 bp AAACTTGTATTTACCAATAGTGTCACCTTTATCCCTCTTTACCTTAAGTCACCCGTCATGGACACAGGCTaGATGCAGGCTGCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: KLVFTNSVTFIPLYLKSPVMDTG*MQAAAL
Trigger: GAGAGCAGCAGCCTGCATTCAGCCTGTGTCCATGAC...GGGTGACTTAAGGTAAAGAGGGATAAAGGTGACACTATTGGTAAATACAAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR TCA 90 bp ACTGGATATGTCCCAGCATCAGATGTTTGGCCAGTCCAACATTCATCTTCAGGCAGTGCAGATCCACCTTaGGTTGAAAATCTACTTCAC +
Preference number: 4 (lower is better)
Translates to: TGYVPASDVWPVQHSSSGSADPP*VENLLH
Trigger: GTGAAGTAGATTTTCAACTCAAGGTGGATCTGCACT...GCCTGAAGATGAATGTTGGACTGGCCAAACATCTGATGCTGGGACATATCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR TCA 90 bp AAACTTGTATTTACCAATAGTGTCACCTTTATCCCTCTTTACCTTAAGTCACCCTCATCATGTGGGACGTaGGCCAGGCCAGATCCTTGC +
Preference number: 4 (lower is better)
Translates to: KLVFTNSVTFIPLYLKSPSSCGT*ARPDPC
Trigger: GCAAGGATCTGGCCTGGCTCACGTCCCACATGATGA...GGGTGACTTAAGGTAAAGAGGGATAAAGGTGACACTATTGGTAAATACAAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR TCA 90 bp GACCCGGATTTCTTCAGTTTCTGCATGAGCCATAAGCCTGTACTAACCAGGGTGATTGATATATACACCTaGGATTCAGAGCACATGTCC +
Preference number: 4 (lower is better)
Translates to: DPDFFSFCMSHKPVLTRVIDIYT*DSEHMS
Trigger: GGACATGTGCTCTGAATCTCAGGTGTATATATCAAT...CACCCTGGTTAGTACAGGCTTATGGCTCATGCAGAAACTGAAGAAATCCGGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp TATGTCCCAGCATCAGATGTTTGGCCAGTCCAACATTCATCTTCAGGCACACCTATCAGATATGATGGATaGAGATCTCTTGATGACCCC +
Preference number: 4 (lower is better)
Translates to: YVPASDVWPVQHSSSGTPIRYDG*RSLDDP
Trigger: GGGGTCATCAAGAGATCTTCATCCATCATATCTGAT...AGGTGTGCCTGAAGATGAATGTTGGACTGGCCAAACATCTGATGCTGGGACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR TCA 90 bp ACAAAAATTACGCAGAGAATGAAGACATACAAGACCATTATCTTGGCAGGCATTCCTCCTCTGGGCTACTaGTGTGGGGAGCAGATACAG +
Preference number: 4 (lower is better)
Translates to: TKITQRMKTYKTIILAGIPPLGY*CGEQIQ
Trigger: CTGTATCTGCTCCCCACATCAGTAGCCCAGAGGAGG...AATGCCTGCCAAGATAATGGTCTTGTATGTCTTCATTCTCTGCGTAATTTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR TCA 90 bp TTCCTTTTACCTAATTCGGGATATGGAGAGGTTGTACAACTGAATGTGTTGAATCCTCCTCTGGGCTACTaGTGTGGGGAGCAGATACAG +
Preference number: 4 (lower is better)
Translates to: FLLPNSGYGEVVQLNVLNPPLGY*CGEQIQ
Trigger: CTGTATCTGCTCCCCACATCAGTAGCCCAGAGGAGG...ATTCAACACATTCAGTTGTACAACCTCTCCATATCCCGAATTAGGTAAAAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR TCA 90 bp CTCCTCCTATCTGATCTCACTTTTGTCCCTGTCGTCTATTGGTTTTTATCAACGGAGTCACCACAAAGTTaGGAGCAAGATCCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: LLLSDLTFVPVVYWFLSTESPQS*EQDPGE
Trigger: TTCCCCAGGATCTTGCTCTCAACTTTGTGGTGACTC...CGTTGATAAAAACCAATAGACGACAGGGACAAAAGTGAGATCAGATAGGAGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR TCA 90 bp AATTCGGGATATGGAGAGGTTGTACAACTGAATGTGTTGAATGATTTCATCCAACTCCTTGGGCACAGATaGGAAAGGGAGACAGGTGGC +
Preference number: 4 (lower is better)
Translates to: NSGYGEVVQLNVLNDFIQLLGHR*ERETGG
Trigger: GCCACCTGTCTCCCTTTCTCATCTGTGCCCAAGGAG...TTGGATGAAATCATTCAACACATTCAGTTGTACAACCTCTCCATATCCCGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276737.10
ENST00000467365.1
ENST00000482951.6
CDS-3UTR TCA 90 bp CTGTCTTACTTATCCCTACTGTCCAGGTTCATTCATCTCTTCCATACAACGAAACCAAAGGCTGATGGGTaGTGGGAAACAGGGTCTGTT +
Preference number: 4 (lower is better)
Translates to: LSYLSLLSRFIHLFHTTKPKADG*WETGSV
Trigger: AACAGACCCTGTTTCCCATCACCCATCAGCCTTTGG...TTTCGTTGTATGGAAGAGATGAATGAACCTGGACAGTAGGGATAAGTAAGACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR TCA 90 bp CGTGTGAGGACCGATCGGATGATGATGTTGCCAAGAGAATGGCCAATGAAGCTAACACAGACAACCAGGTaGATTCCATCTTCCAAATTT +
Preference number: 4 (lower is better)
Translates to: RVRTDRMMMLPREWPMKLTQTTR*IPSSKF
Trigger: AAATTTGGAAGATGGAATTCACCTGGTTGTCTGTGT...TAGCTTCATTGGCCATTCTCTTGGCAACATCATCATCCGATCGGTCCTCACACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp TCAGTGCCCCCTTCTGCTAGGTTAGTCTCACTCAGTGTTCCCTACTACAGACAAGCAAATGTGTCCATCTaGTTCTTTTCAGACATTAGG +
Preference number: 4 (lower is better)
Translates to: SVPPSARLVSLSVPYYRQANVSI*FFSDIR
Trigger: CCTAATGTCTGAAAAGAATCAGATGGACACATTTGC...TTGTCTGTAGTAGGGAACACTGAGTGAGACTAACCTAGCAGAAGGGGGCACTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR TCA 90 bp TGGGCATCACATTTTCTTGAACAACTGACACATTTGAATCTATTGAGGATTCTATACAGGGTTCCCAGGTaGGGCCCAGAGAGTGACAGG +
Preference number: 4 (lower is better)
Translates to: WASHFLEQLTHLNLLRILYRVPR*GPESDR
Trigger: CCTGTCACTCTCTGGGCCTCACCTGGGAACCCTGTA...TAGAATCCTCAATAGATTCAAATGTGTCAGTTGTTCAAGAAAATGTGATGCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR TCA 90 bp TCGGATGATGATGTTGCCAAGAGAATGGCCAATGAAGCTAATTCGGGATATGGAGGCCCAGGAGGTTGTTaGTCATTTCTGCATAAACTG +
Preference number: 4 (lower is better)
Translates to: SDDDVAKRMANEANSGYGGPGGC*SFLHKL
Trigger: CAGTTTATGCAGAAATGATCAACAACCTCCTGGGCC...TCCATATCCCGAATTAGCTTCATTGGCCATTCTCTTGGCAACATCATCATCCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp ACACTCCTGCAAAGCTGCCCATCTGGACTCATTCCCATGGTCTGCTTTTATTTTCAAAGGACCAGGGAATaGCGAACATTGCTGATGAAA +
Preference number: 4 (lower is better)
Translates to: TLLQSCPSGLIPMVCFYFQRTRE*RTLLMK
Trigger: TTTCATCAGCAATGTTCGTCATTCCCTGGTCCTTTG...AAAATAAAAGCAGACCATGGGAATGAGTCCAGATGGGCAGCTTTGCAGGAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR TCA 90 bp ACACTCCTGCAAAGCTGCCCATCTGGACTCATTCCCATGGTCTGCTTTTATTTTTTTTCAAATGAGGCATaGCACGCAACACTCGACACT +
Preference number: 4 (lower is better)
Translates to: TLLQSCPSGLIPMVCFYFFSNEA*HATLDT
Trigger: AGTGTCGAGTGTTGCGTGTCATGCCTCATTTGAAAA...AAAATAAAAGCAGACCATGGGAATGAGTCCAGATGGGCAGCTTTGCAGGAGTGT
46% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR TCA 90 bp ACTGGATATGTCCCAGCATCAGATGTTTGGCCAGTCCAACATTCATCTTCAGGCGATCTGGTAATACAATaGGCCTTGGAGGTAAGTCTA +
Preference number: 4 (lower is better)
Translates to: TGYVPASDVWPVQHSSSGDLVIQ*ALEVSL
Trigger: TAGACTTACCTCCAAGGCTCATTGTATTACCAGATC...GCCTGAAGATGAATGTTGGACTGGCCAAACATCTGATGCTGGGACATATCCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR GCA 90 bp ACAAAAATTACGCAGAGAATGAAGACATACAAGACCATTATCTTGGCAGGCATTAGGCTGAATGCAGGCTaGTGCTCTCTGTCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: TKITQRMKTYKTIILAGIRLNAG*CSLSAQ
Trigger: CTGGGCAGACAGAGAGCAGCAGCCTGCATTCAGCCT...AATGCCTGCCAAGATAATGGTCTTGTATGTCTTCATTCTCTGCGTAATTTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR GCA 90 bp AAACTTGTATTTACCAATAGTGTCACCTTTATCCCTCTTTACCTTAAGTCACCCCTGATCAATGGCTGCTaGAGAGCCACCAGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: KLVFTNSVTFIPLYLKSPLINGC*RATRAA
Trigger: TGCTGCCCTGGTGGCTCTGCAGCAGCCATTGATCAG...GGGTGACTTAAGGTAAAGAGGGATAAAGGTGACACTATTGGTAAATACAAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR GCA 90 bp TGGGCATCACATTTTCTTGAACAACTGACACATTTGAATCTATTGAGGATTCTAAGGCACAGGTCTCGGTaGCACTTGTGTGCGTGCTGC +
Preference number: 4 (lower is better)
Translates to: WASHFLEQLTHLNLLRILRHRSR*HLCACC
Trigger: GCAGCACGCACACAAGTGGCACCGAGACCTGTGCCT...TAGAATCCTCAATAGATTCAAATGTGTCAGTTGTTCAAGAAAATGTGATGCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR GCA 90 bp CTTATCCCTACTGTCCAGGTTCATTCATCTCTTCCATACAACGAAATGATTCTTGTGGTCACTTGGGAGTaGAGAGTGACTGTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: LIPTVQVHSSLPYNEMILVVTWE*RVTVSR
Trigger: CCTGGACACAGTCACTCTGCACTCCCAAGTGACCAC...AAGAATCATTTCGTTGTATGGAAGAGATGAATGAACCTGGACAGTAGGGATAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR GCA 90 bp CTTCAGCTCTTGGTTTTTCAAAACCTGGGAATGAACGGAATGGGTCACAGTGGGCTGAAATGTCAGGACTaGAAGTTTTTGGTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: LQLLVFQNLGMNGMGHSGLKCQD*KFLVLH
Trigger: ATGGAGCACCAAAAACTTGCAGTCCTGACATTTCAG...CCCACTGTGACCCATTCCGTTCATTCCCAGGTTTTGAAAAACCAAGAGCTGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR GCA 90 bp CTTCCCCCAGCATTAACTACCTGTGGTTTCCTTTTACCTAATTCGGGATATGGAGGGAACCTTGGCTCTTaGTGTGCATATCTGAAGGTT +
Preference number: 4 (lower is better)
Translates to: LPPALTTCGFLLPNSGYGGNLGS*CAYLKV
Trigger: AACCTTCAGATATGCACAGCAAGAGCCAAGGTTCCC...TCCATATCCCGAATTAGGTAAAAGGAAACCACAGGTAGTTAATGCTGGGGGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR GCA 90 bp GTCTGTAAAAGCAGGTCTCAGCTAAAGCTCTCCACCGATCGTAAGCATTACCAACCTGGGGTTTTCAAGTaGTATGACGCGTGGTATTTT +
Preference number: 4 (lower is better)
Translates to: VCKSRSQLKLSTDRKHYQPGVFK*YDAWYF
Trigger: AAAATACCACGCGTCATAGCACTTGAAAACCCCAGG...TTGGTAATGCTTACGATCGGTGGAGAGCTTTAGCTGAGACCTGCTTTTACAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395297.6
ENST00000482951.6
CDS-3UTR GCA 90 bp ACACTCCTGCAAAGCTGCCCATCTGGACTCATTCCCATGGTCTGCTTTTATTTTTGGGGTTTCCTCAAGTaGTCTATGAAGAGATCTGGT +
Preference number: 4 (lower is better)
Translates to: TLLQSCPSGLIPMVCFYFWGFLK*SMKRSG
Trigger: ACCAGATCTCTTCATAGAGCACTTGAGGAAACCCCA...AAAATAAAAGCAGACCATGGGAATGAGTCCAGATGGGCAGCTTTGCAGGAGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR GCA 90 bp CTGTCTTACTTATCCCTACTGTCCAGGTTCATTCATCTCTTCCATACAACGAAAGAACCGCTTTGGCTTTaGTGGCCTGTTGAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: LSYLSLLSRFIHLFHTTKEPLWL*WPVEFL
Trigger: CAGGAACTCAACAGGCCAGCAAAGCCAAAGCGGTTC...TTTCGTTGTATGGAAGAGATGAATGAACCTGGACAGTAGGGATAAGTAAGACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR GCA 90 bp CTCCTCCTATCTGATCTCACTTTTGTCCCTGTCGTCTATTGGTTTTTATCAACGCAGAGTAAAGGTCTCTaGAGAAGTCAGATGGGACCC +
Preference number: 4 (lower is better)
Translates to: LLLSDLTFVPVVYWFLSTQSKGL*RSQMGP
Trigger: GGGTCCCATCTGACTTCTGCAGAGACCTTTACTCTG...CGTTGATAAAAACCAATAGACGACAGGGACAAAAGTGAGATCAGATAGGAGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR GCA 90 bp TCCTCATCCAACGTGCTGGAATGGGTAGAAACAACTCCAAAGGATCCCAAAGGCGATTTCTTCAGTTTCTaGATGAGCCATAAGCCTGTA +
Preference number: 4 (lower is better)
Translates to: SSSNVLEWVETTPKDPKGDFFSF*MSHKPV
Trigger: TACAGGCTTATGGCTCATGCAGAAACTGAAGAAATC...GCCTTTGGGATCCTTTGGAGTTGTTTCTACCCATTCCAGCACGTTGGATGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR GCA 90 bp CCTACTACCACTTTGCTTAGCCCAGTCCTGTCTAATCCATACTTATCTCTAGAGGCATTACCAAAGACCTaGTCCCTCAAAGCCACTACT +
Preference number: 4 (lower is better)
Translates to: PTTTLLSPVLSNPYLSLEALPKT*SLKATT
Trigger: AGTAGTGGCTTTGAGGGAGCAGGTCTTTGGTAATGC...CTCTAGAGATAAGTATGGATTAGACAGGACTGGGCTAAGCAAAGTGGTAGTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR GCA 90 bp TCAGTGCCCCCTTCTGCTAGGTTAGTCTCACTCAGTGTTCCCTACTACAGACAATTCAGAAGGGATTTTTaGAGAAGCAGGAGCTTTCAT +
Preference number: 4 (lower is better)
Translates to: SVPPSARLVSLSVPYYRQFRRDF*RSRSFH
Trigger: ATGAAAGCTCCTGCTTCTGCAAAAATCCCTTCTGAA...TTGTCTGTAGTAGGGAACACTGAGTGAGACTAACCTAGCAGAAGGGGGCACTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp AAACTTGTATTTACCAATAGTGTCACCTTTATCCCTCTTTACCTTAAGTCACCCAGACCATTCCGGGGGTaGAAGTGCAGGCCAAGCGTT +
Preference number: 4 (lower is better)
Translates to: KLVFTNSVTFIPLYLKSPRPFRG*KCRPSV
Trigger: AACGCTTGGCCTGCACTTCCACCCCCGGAATGGTCT...GGGTGACTTAAGGTAAAGAGGGATAAAGGTGACACTATTGGTAAATACAAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp AAACTTGTATTTACCAATAGTGTCACCTTTATCCCTCTTTACCTTAAGTCACCCAACATGACCGGGACCTaGTGGTGCAGACCATTCCGG +
Preference number: 4 (lower is better)
Translates to: KLVFTNSVTFIPLYLKSPNMTGT*WCRPFR
Trigger: CCGGAATGGTCTGCACCACCAGGTCCCGGTCATGTT...GGGTGACTTAAGGTAAAGAGGGATAAAGGTGACACTATTGGTAAATACAAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp GATGATGTTGCCAAGAGAATGGCCAATGAAGCTAATTCGGGATATGGAGAGGTTAGTAAAACTGATCAATaGCTGCTGCAGAGCCACCAG +
Preference number: 4 (lower is better)
Translates to: DDVAKRMANEANSGYGEVSKTDQ*LLQSHQ
Trigger: CTGGTGGCTCTGCAGCAGCCATTGATCAGTTTTACT...AACCTCTCCATATCCCGAATTAGCTTCATTGGCCATTCTCTTGGCAACATCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp ATGATGATGTTGCCAAGAGAATGGCCAATGAAGCTAATTCGGGATATGGAGAGGCCAGGAGCCTCTTCCTaGACGAGTAAAACTGATCAA +
Preference number: 4 (lower is better)
Translates to: MMMLPREWPMKLIRDMERPGASS*TSKTDQ
Trigger: TTGATCAGTTTTACTCGTCCAGGAAGAGGCTCCTGG...CCTCTCCATATCCCGAATTAGCTTCATTGGCCATTCTCTTGGCAACATCATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp AATTCGGGATATGGAGAGGTTGTACAACTGAATGTGTTGAATGATTTCATCCAACGTGTGTGGCAGCTCTaGGATGTCCCGCATGATCAC +
Preference number: 4 (lower is better)
Translates to: NSGYGEVVQLNVLNDFIQRVWQL*DVPHDH
Trigger: GTGATCATGCGGGACATCCCAGAGCTGCCACACACG...TTGGATGAAATCATTCAACACATTCAGTTGTACAACCTCTCCATATCCCGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp GTCTGTAAAAGCAGGTCTCAGCTAAAGCTCTCCACCGATCGTAAGCATTACCAACCAGCATCAGATGTTTaGCCAGTCCAACATTCATCT +
Preference number: 4 (lower is better)
Translates to: VCKSRSQLKLSTDRKHYQPASDV*PVQHSS
Trigger: AGATGAATGTTGGACTGGCCAAACATCTGATGCTGG...TTGGTAATGCTTACGATCGGTGGAGAGCTTTAGCTGAGACCTGCTTTTACAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395297.6
ENST00000482951.6
CDS-3UTR CCA 90 bp ATGATGATGTTGCCAAGAGAATGGCCAATGAAGCTAATTCGGGATATGGAGAGGGAGATGGCATTTTGGTaGCTTCCACCTACTACCACT +
Preference number: 4 (lower is better)
Translates to: MMMLPREWPMKLIRDMEREMAFW*LPPTTT
Trigger: AGTGGTAGTAGGTGGAAGCCACCAAAATGCCATCTC...CCTCTCCATATCCCGAATTAGCTTCATTGGCCATTCTCTTGGCAACATCATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp CCTACTACCACTTTGCTTAGCCCAGTCCTGTCTAATCCATACTTATCTCTAGAGGAAGAGATGGCATTTTaGTGGCTTCCACCTACTACC +
Preference number: 4 (lower is better)
Translates to: PTTTLLSPVLSNPYLSLEEEMAF*WLPPTT
Trigger: GGTAGTAGGTGGAAGCCACCAAAATGCCATCTCTTC...CTCTAGAGATAAGTATGGATTAGACAGGACTGGGCTAAGCAAAGTGGTAGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR CCA 90 bp CTTCCCCCAGCATTAACTACCTGTGGTTTCCTTTTACCTAATTCGGGATATGGAAGCCTGGATGCCGCTTaGCAAACTTGTGTTACTTTC +
Preference number: 4 (lower is better)
Translates to: LPPALTTCGFLLPNSGYGSLDAA*QTCVTF
Trigger: GAAAGTAACACAAGTTTGCCAAGCGGCATCCAGGCT...TCCATATCCCGAATTAGGTAAAAGGAAACCACAGGTAGTTAATGCTGGGGGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR CCA 90 bp TCGGATGATGATGTTGCCAAGAGAATGGCCAATGAAGCTAATTCGGGATATGGATTTAGGCATGCCCTTTaGGGTTTCCTCAAGTGCTCT +
Preference number: 4 (lower is better)
Translates to: SDDDVAKRMANEANSGYGFRHAL*GFLKCS
Trigger: AGAGCACTTGAGGAAACCCCAAAGGGCATGCCTAAA...TCCATATCCCGAATTAGCTTCATTGGCCATTCTCTTGGCAACATCATCATCCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp TTACCTAATTCGGGATATGGAGAGGTTGTACAACTGAATGTGTTGAATGATTTCCGGAATGGGTCACAGTaGGGCACACAGTGCCTGCTT +
Preference number: 4 (lower is better)
Translates to: LPNSGYGEVVQLNVLNDFRNGSQ*GTQCLL
Trigger: AAGCAGGCACTGTGTGCCCCACTGTGACCCATTCCG...GAAATCATTCAACACATTCAGTTGTACAACCTCTCCATATCCCGAATTAGGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR CCA 90 bp TTCCTTTTACCTAATTCGGGATATGGAGAGGTTGTACAACTGAATGTGTTGAATAAGAGAATCCAGCCCTaGCAGGGGTCTCCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: FLLPNSGYGEVVQLNVLNKRIQP*QGSPWA
Trigger: TGCCCAAGGAGACCCCTGCCAGGGCTGGATTCTCTT...ATTCAACACATTCAGTTGTACAACCTCTCCATATCCCGAATTAGGTAAAAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR CCA 90 bp ATTGAGAACCCTGGTCCTAGATGCGTTTCCACACTTCAGAAGGGATTTTTGCAGTGCATAGAAGAATTCTaGGGAAGTAGGTGGAGCAAC +
Preference number: 4 (lower is better)
Translates to: IENPGPRCVSTLQKGFLQCIEEF*GSRWSN
Trigger: GTTGCTCCACCTACTTCCCCAGAATTCTTCTATGCA...CTGCAAAAATCCCTTCTGAAGTGTGGAAACGCATCTAGGACCAGGGTTCTCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
3UTR CAA 72 bp GAGATGGCATTTTGGTGGCTTCCACCTACTACCACTTaGCTTAGCCCAGTCCTGTCTAATCCATACTTATCT +
Preference number: 4 (lower is better)
Translates to: EMAFWWLPPTTT*LSPVLSNPYLS
Trigger: AGATAAGTATGGATTAGACAGGACTGGGCTAAGCAAAGTGGTAGTAGGTGGAAGCCACCAAAATGCCATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR TCA 90 bp GAAGCTAATTCGGGATATGGAGAGGTTGTACAACTGAATGTGTTGAATGATTTCGTAGAAGCTTCCCTCTaGGGAAGTCGGCTTGCAGTA +
Preference number: 4 (lower is better)
Translates to: EANSGYGEVVQLNVLNDFVEASL*GSRLAV
Trigger: TACTGCAAGCCGACTTCCTCAGAGGGAAGCTTCTAC...GAAATCATTCAACACATTCAGTTGTACAACCTCTCCATATCCCGAATTAGCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp CTTATCCCTACTGTCCAGGTTCATTCATCTCTTCCATACAACGAAATGATTCTTGTAGAAGCTTCCCTCTaGGGAAGTCGGCTTGCAGTA +
Preference number: 4 (lower is better)
Translates to: LIPTVQVHSSLPYNEMILVEASL*GSRLAV
Trigger: TACTGCAAGCCGACTTCCTCAGAGGGAAGCTTCTAC...AAGAATCATTTCGTTGTATGGAAGAGATGAATGAACCTGGACAGTAGGGATAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR TCA 90 bp AATTCGGGATATGGAGAGGTTGTACAACTGAATGTGTTGAATGATTTCATCCAACTCCTACTCTCATGCTaGGCATTGAAGGCCACCAGG +
Preference number: 4 (lower is better)
Translates to: NSGYGEVVQLNVLNDFIQLLLSC*ALKATR
Trigger: CCTGGTGGCCTTCAATGCTCAGCATGAGAGTAGGAG...TTGGATGAAATCATTCAACACATTCAGTTGTACAACCTCTCCATATCCCGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp AAACTTGTATTTACCAATAGTGTCACCTTTATCCCTCTTTACCTTAAGTCACCCAGGGCTCAGAGGGGGTaGGTTTCAAGCTTAGCAGCA +
Preference number: 4 (lower is better)
Translates to: KLVFTNSVTFIPLYLKSPRAQRG*VSSLAA
Trigger: TGCTGCTAAGCTTGAAACTCACCCCCTCTGAGCCCT...GGGTGACTTAAGGTAAAGAGGGATAAAGGTGACACTATTGGTAAATACAAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR TCA 90 bp CTCCTCCTATCTGATCTCACTTTTGTCCCTGTCGTCTATTGGTTTTTATCAACGCTTGCTGTGCATATCTaGAGGTTCAGCAAAACCTCC +
Preference number: 4 (lower is better)
Translates to: LLLSDLTFVPVVYWFLSTLAVHI*RFSKTS
Trigger: GGAGGTTTTGCTGAACCTTCAGATATGCACAGCAAG...CGTTGATAAAAACCAATAGACGACAGGGACAAAAGTGAGATCAGATAGGAGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR TCA 90 bp TTCCTTTTACCTAATTCGGGATATGGAGAGGTTGTACAACTGAATGTGTTGAATTCAGATGGGACCCCATaGTGGAAGTGCCTGCCTTCA +
Preference number: 4 (lower is better)
Translates to: FLLPNSGYGEVVQLNVLNSDGTP*WKCLPS
Trigger: TGAAGGCAGGCACTTCCATCATGGGGTCCCATCTGA...ATTCAACACATTCAGTTGTACAACCTCTCCATATCCCGAATTAGGTAAAAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR TCA 90 bp AGGACCGATCGGATGATGATGTTGCCAAGAGAATGGCCAATGAAGCTAATTCGGGCAAATGTGTCCATCTaGTTCTTTTCAGACATTAGG +
Preference number: 4 (lower is better)
Translates to: RTDRMMMLPREWPMKLIRANVSI*FFSDIR
Trigger: CCTAATGTCTGAAAAGAATCAGATGGACACATTTGC...CCGAATTAGCTTCATTGGCCATTCTCTTGGCAACATCATCATCCGATCGGTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp CTTATCCCTACTGTCCAGGTTCATTCATCTCTTCCATACAACGAAATGATTCTTACGTGTGGAGTTTGTTaGGGTAATACCGGAACCGGG +
Preference number: 4 (lower is better)
Translates to: LIPTVQVHSSLPYNEMILTCGVC*GNTGTG
Trigger: CCCGGTTCCGGTATTACCTCAACAAACTCCACACGT...AAGAATCATTTCGTTGTATGGAAGAGATGAATGAACCTGGACAGTAGGGATAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR TCA 90 bp ACACTCCTGCAAAGCTGCCCATCTGGACTCATTCCCATGGTCTGCTTTTATTTTCATTTCAATCCTGGCTaGATGAAATGGCACATAACG +
Preference number: 4 (lower is better)
Translates to: TLLQSCPSGLIPMVCFYFHFNPG*MKWHIT
Trigger: CGTTATGTGCCATTTCATTCAGCCAGGATTGAAATG...AAAATAAAAGCAGACCATGGGAATGAGTCCAGATGGGCAGCTTTGCAGGAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR TCA 90 bp CTCCTCCTATCTGATCTCACTTTTGTCCCTGTCGTCTATTGGTTTTTATCAACGGGCCCAGGAGGTTGTTaGTCATTTCTGCATAAACTG +
Preference number: 4 (lower is better)
Translates to: LLLSDLTFVPVVYWFLSTGPGGC*SFLHKL
Trigger: CAGTTTATGCAGAAATGATCAACAACCTCCTGGGCC...CGTTGATAAAAACCAATAGACGACAGGGACAAAAGTGAGATCAGATAGGAGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR TCA 90 bp ACTGGATATGTCCCAGCATCAGATGTTTGGCCAGTCCAACATTCATCTTCAGGCGTTGAAGCTTCATTCTaGAATGGTGAGGTCTGTAAA +
Preference number: 4 (lower is better)
Translates to: TGYVPASDVWPVQHSSSGVEASF*NGEVCK
Trigger: TTTACAGACCTCACCATTTCAGAATGAAGCTTCAAC...GCCTGAAGATGAATGTTGGACTGGCCAAACATCTGATGCTGGGACATATCCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR TCA 90 bp TCAGTGCCCCCTTCTGCTAGGTTAGTCTCACTCAGTGTTCCCTACTACAGACAACATGAGGAGAGAATATaGATATGGGCATCACATTTT +
Preference number: 4 (lower is better)
Translates to: SVPPSARLVSLSVPYYRQHEERI*IWASHF
Trigger: AAAATGTGATGCCCATATTCATATTCTCTCCTCATG...TTGTCTGTAGTAGGGAACACTGAGTGAGACTAACCTAGCAGAAGGGGGCACTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR TCA 90 bp TCAGTGCCCCCTTCTGCTAGGTTAGTCTCACTCAGTGTTCCCTACTACAGACAAAATAACAGCTTATGTTaGGTCTTCAGTCTGGTTGTT +
Preference number: 4 (lower is better)
Translates to: SVPPSARLVSLSVPYYRQNNSLC*VFSLVV
Trigger: AACAACCAGACTGAAGACTCAACATAAGCTGTTATT...TTGTCTGTAGTAGGGAACACTGAGTGAGACTAACCTAGCAGAAGGGGGCACTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR GCA 90 bp CTTATCCCTACTGTCCAGGTTCATTCATCTCTTCCATACAACGAAATGATTCTTTGCCACTTGTGTGCGTaGTGCATGCAGTTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: LIPTVQVHSSLPYNEMILCHLCA*CMQFSE
Trigger: CTCTGAGAACTGCATGCAGCACGCACACAAGTGGCA...AAGAATCATTTCGTTGTATGGAAGAGATGAATGAACCTGGACAGTAGGGATAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR GCA 90 bp GAAGCTAATTCGGGATATGGAGAGGTTGTACAACTGAATGTGTTGAATGATTTCGCCAGGCCAGATCCTTaGTTATCTGCTCAGCGATCT +
Preference number: 4 (lower is better)
Translates to: EANSGYGEVVQLNVLNDFARPDP*LSAQRS
Trigger: AGATCGCTGAGCAGATAAGCAAGGATCTGGCCTGGC...GAAATCATTCAACACATTCAGTTGTACAACCTCTCCATATCCCGAATTAGCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR GCA 90 bp TGCAGTAGAGACCCGGATTTCTTCAGTTTCTGCATGAGCCATAAGCCTGTACTACTGAAATGTCAGGACTaGAAGTTTTTGGTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: CSRDPDFFSFCMSHKPVLLKCQD*KFLVLH
Trigger: ATGGAGCACCAAAAACTTGCAGTCCTGACATTTCAG...TAGTACAGGCTTATGGCTCATGCAGAAACTGAAGAAATCCGGGTCTCTACTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR GCA 90 bp CTCCTCCTATCTGATCTCACTTTTGTCCCTGTCGTCTATTGGTTTTTATCAACGCACCTACTACCACTTTaGTTAGCCCAGTCCTGTCTA +
Preference number: 4 (lower is better)
Translates to: LLLSDLTFVPVVYWFLSTHLLPL*LAQSCL
Trigger: TAGACAGGACTGGGCTAAGCAAAGTGGTAGTAGGTG...CGTTGATAAAAACCAATAGACGACAGGGACAAAAGTGAGATCAGATAGGAGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR GCA 90 bp CTTCCCCCAGCATTAACTACCTGTGGTTTCCTTTTACCTAATTCGGGATATGGACCTGGGGTTTTCAAGTaGTATGACGCGTGGTATTTT +
Preference number: 4 (lower is better)
Translates to: LPPALTTCGFLLPNSGYGPGVFK*YDAWYF
Trigger: AAAATACCACGCGTCATAGCACTTGAAAACCCCAGG...TCCATATCCCGAATTAGGTAAAAGGAAACCACAGGTAGTTAATGCTGGGGGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR GCA 90 bp ACATTTCAATCCTGGCTGAATGAAATGGCACATAACGGTCTTGGGGAGAAGCAATGGGGTTTCCTCAAGTaGTCTATGAAGAGATCTGGT +
Preference number: 4 (lower is better)
Translates to: TFQSWLNEMAHNGLGEKQWGFLK*SMKRSG
Trigger: ACCAGATCTCTTCATAGAGCACTTGAGGAAACCCCA...TTGCTTCTCCCCAAGACCGTTATGTGCCATTTCATTCAGCCAGGATTGAAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR GCA 90 bp AGTCACTTACCAATAACAGCTTATGTTGAGTCTTCAGTCTGGTTGTTCTCCTCCCCTCAACCTCTGAGATaGCACTGTTGGAAAGAGCTT +
Preference number: 4 (lower is better)
Translates to: SHLPITAYVESSVWLFSSPQPLR*HCWKEL
Trigger: AAGCTCTTTCCAACAGTGGCATCTCAGAGGTTGAGG...GGAGGAGAACAACCAGACTGAAGACTCAACATAAGCTGTTATTGGTAAGTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR GCA 90 bp ACCTTTACCAAGCCAGGAGCCTCTTCCTGGACGAGTAAAACTGATCAATGGCTGCACTCCTCTATTAAATaGTGTGTCATCCATAATGCA +
Preference number: 4 (lower is better)
Translates to: TFTKPGASSWTSKTDQWLHSSIK*CVIHNA
Trigger: TGCATTATGGATGACACAGCATTTAATAGAGGAGTG...CAGCCATTGATCAGTTTTACTCGTCCAGGAAGAGGCTCCTGGCTTGGTAAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR GCA 90 bp CTCCTCCTATCTGATCTCACTTTTGTCCCTGTCGTCTATTGGTTTTTATCAACGGCATTACCAAAGACCTaGTCCCTCAAAGCCACTACT +
Preference number: 4 (lower is better)
Translates to: LLLSDLTFVPVVYWFLSTALPKT*SLKATT
Trigger: AGTAGTGGCTTTGAGGGAGCAGGTCTTTGGTAATGC...CGTTGATAAAAACCAATAGACGACAGGGACAAAAGTGAGATCAGATAGGAGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR GCA 90 bp CTTATCCCTACTGTCCAGGTTCATTCATCTCTTCCATACAACGAAATGATTCTTAGCTTCACACGTGTGTaGATTCATCTCAGTGCCCCC +
Preference number: 4 (lower is better)
Translates to: LIPTVQVHSSLPYNEMILSFTRV*IHLSAP
Trigger: GGGGGCACTGAGATGAATGCACACACGTGTGAAGCT...AAGAATCATTTCGTTGTATGGAAGAGATGAATGAACCTGGACAGTAGGGATAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR GCA 90 bp AGTCACTTACCAATAACAGCTTATGTTGAGTCTTCAGTCTGGTTGTTCTCCTCCAACCCTGGTCCTAGATaGGTTTCCACACTTCAGAAG +
Preference number: 4 (lower is better)
Translates to: SHLPITAYVESSVWLFSSNPGPR*VSTLQK
Trigger: CTTCTGAAGTGTGGAAACGCATCTAGGACCAGGGTT...GGAGGAGAACAACCAGACTGAAGACTCAACATAAGCTGTTATTGGTAAGTGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR GCA 90 bp CTTATCCCTACTGTCCAGGTTCATTCATCTCTTCCATACAACGAAATGATTCTTAAGAACCAGAGTCTATaGCCAGCTCTGACTCGGGAG +
Preference number: 4 (lower is better)
Translates to: LIPTVQVHSSLPYNEMILKNQSL*PALTRE
Trigger: CTCCCGAGTCAGAGCTGGGCATAGACTCTGGTTCTT...AAGAATCATTTCGTTGTATGGAAGAGATGAATGAACCTGGACAGTAGGGATAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp TGGGCATCACATTTTCTTGAACAACTGACACATTTGAATCTATTGAGGATTCTACGTGTGTGGCAGCTCTaGGATGTCCCGCATGATCAC +
Preference number: 4 (lower is better)
Translates to: WASHFLEQLTHLNLLRILRVWQL*DVPHDH
Trigger: GTGATCATGCGGGACATCCCAGAGCTGCCACACACG...TAGAATCCTCAATAGATTCAAATGTGTCAGTTGTTCAAGAAAATGTGATGCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp AAACTTGTATTTACCAATAGTGTCACCTTTATCCCTCTTTACCTTAAGTCACCCCACAGAGTCATCATGTaGGACGTGAGCCAGGCCAGA +
Preference number: 4 (lower is better)
Translates to: KLVFTNSVTFIPLYLKSPHRVIM*DVSQAR
Trigger: TCTGGCCTGGCTCACGTCCCACATGATGACTCTGTG...GGGTGACTTAAGGTAAAGAGGGATAAAGGTGACACTATTGGTAAATACAAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp CGTGTGAGGACCGATCGGATGATGATGTTGCCAAGAGAATGGCCAATGAAGCTAAGAATCCATTTGGGATaGTTTTATGGTAGACAAGAC +
Preference number: 4 (lower is better)
Translates to: RVRTDRMMMLPREWPMKLRIHLG*FYGRQD
Trigger: GTCTTGTCTACCATAAAACCATCCCAAATGGATTCT...TAGCTTCATTGGCCATTCTCTTGGCAACATCATCATCCGATCGGTCCTCACACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp GCATTATCCCTGAAGGTCAGCTGCAGTAGAGACCCGGATTTCTTCAGTTTCTGCAGAATCCATTTGGGATaGTTTTATGGTAGACAAGAC +
Preference number: 4 (lower is better)
Translates to: ALSLKVSCSRDPDFFSFCRIHLG*FYGRQD
Trigger: GTCTTGTCTACCATAAAACCATCCCAAATGGATTCT...GCAGAAACTGAAGAAATCCGGGTCTCTACTGCAGCTGACCTTCAGGGATAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp TGCAGTAGAGACCCGGATTTCTTCAGTTTCTGCATGAGCCATAAGCCTGTACTAATTCTCACCTGGCTCTaGACACCTTATAACTTCTTC +
Preference number: 4 (lower is better)
Translates to: CSRDPDFFSFCMSHKPVLILTWL*TPYNFF
Trigger: GAAGAAGTTATAAGGTGTCCAGAGCCAGGTGAGAAT...TAGTACAGGCTTATGGCTCATGCAGAAACTGAAGAAATCCGGGTCTCTACTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp AGTCACTTACCAATAACAGCTTATGTTGAGTCTTCAGTCTGGTTGTTCTCCTCCGAGATGGCATTTTGGTaGCTTCCACCTACTACCACT +
Preference number: 4 (lower is better)
Translates to: SHLPITAYVESSVWLFSSEMAFW*LPPTTT
Trigger: AGTGGTAGTAGGTGGAAGCCACCAAAATGCCATCTC...GGAGGAGAACAACCAGACTGAAGACTCAACATAAGCTGTTATTGGTAAGTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp CTCCTCCTATCTGATCTCACTTTTGTCCCTGTCGTCTATTGGTTTTTATCAACGGAAGAGATGGCATTTTaGTGGCTTCCACCTACTACC +
Preference number: 4 (lower is better)
Translates to: LLLSDLTFVPVVYWFLSTEEMAF*WLPPTT
Trigger: GGTAGTAGGTGGAAGCCACCAAAATGCCATCTCTTC...CGTTGATAAAAACCAATAGACGACAGGGACAAAAGTGAGATCAGATAGGAGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp CTGTCTTACTTATCCCTACTGTCCAGGTTCATTCATCTCTTCCATACAACGAAACTGAGATGCCACTGTTaGAAAGAGCTTGCTGACCCA +
Preference number: 4 (lower is better)
Translates to: LSYLSLLSRFIHLFHTTKLRCHC*KELADP
Trigger: TGGGTCAGCAAGCTCTTTCCAACAGTGGCATCTCAG...TTTCGTTGTATGGAAGAGATGAATGAACCTGGACAGTAGGGATAAGTAAGACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp AGATGTACTTTCTACACAATTATAATAGATGCTCAGAGGCCAGAGAGGGTTTACCAAGGTGAACCGCTTTaGCTTTGCTGGCCTGTTGAG +
Preference number: 4 (lower is better)
Translates to: RCTFYTIIIDAQRPERVYQGEPL*LCWPVE
Trigger: CTCAACAGGCCAGCAAAGCCAAAGCGGTTCACCTTG...GTAAACCCTCTCTGGCCTCTGAGCATCTATTATAATTGTGTAGAAAGTACATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp CCACATCTGCCACTGGATATGTCCCAGCATCAGATGTTTGGCCAGTCCAACATTTACACATTTCAATCCTaGCTGAATGAAATGGCACAT +
Preference number: 4 (lower is better)
Translates to: PHLPLDMSQHQMFGQSNIYTFQS*LNEMAH
Trigger: ATGTGCCATTTCATTCAGCCAGGATTGAAATGTGTA...AATGTTGGACTGGCCAAACATCTGATGCTGGGACATATCCAGTGGCAGATGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR CCA 90 bp CCCCCTTCTGCTAGGTTAGTCTCACTCAGTGTTCCCTACTACAGACAAAGATGTTTCCTCTTCCTCTGGTaGGAAATATGGTATATCAGA +
Preference number: 4 (lower is better)
Translates to: PPSARLVSLSVPYYRQRCFLFLW*EIWYIR
Trigger: TCTGATATACCATATTTCCCACCAGAGGAAGAGGAA...ACATCTTTGTCTGTAGTAGGGAACACTGAGTGAGACTAACCTAGCAGAAGGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp AGATGTACTTTCTACACAATTATAATAGATGCTCAGAGGCCAGAGAGGGTTTACGCAAAGCTGCCCATCTaGACTCATTCCCATGGTCTG +
Preference number: 4 (lower is better)
Translates to: RCTFYTIIIDAQRPERVYAKLPI*THSHGL
Trigger: CAGACCATGGGAATGAGTCCAGATGGGCAGCTTTGC...GTAAACCCTCTCTGGCCTCTGAGCATCTATTATAATTGTGTAGAAAGTACATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp CTCCTCCTATCTGATCTCACTTTTGTCCCTGTCGTCTATTGGTTTTTATCAACGGGTGCACCATGCAGCTaGACGTTTATTGCCATTAGT +
Preference number: 4 (lower is better)
Translates to: LLLSDLTFVPVVYWFLSTGAPCS*TFIAIS
Trigger: ACTAATGGCAATAAACGTCCAGCTGCATGGTGCACC...CGTTGATAAAAACCAATAGACGACAGGGACAAAAGTGAGATCAGATAGGAGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR TCA 90 bp CTTATCCCTACTGTCCAGGTTCATTCATCTCTTCCATACAACGAAATGATTCTTCCACCCAAGAGTAAATaGACTCGGAAGACCACAGCA +
Preference number: 4 (lower is better)
Translates to: LIPTVQVHSSLPYNEMILPPKSK*TRKTTA
Trigger: TGCTGTGGTCTTCCGAGTTCATTTACTCTTGGGTGG...AAGAATCATTTCGTTGTATGGAAGAGATGAATGAACCTGGACAGTAGGGATAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR TCA 90 bp TGGGCATCACATTTTCTTGAACAACTGACACATTTGAATCTATTGAGGATTCTAGGAAATAGTCGAACATaGCCGGGACCTGGTGGTGCA +
Preference number: 4 (lower is better)
Translates to: WASHFLEQLTHLNLLRILGNSRT*PGPGGA
Trigger: TGCACCACCAGGTCCCGGTCATGTTCGACTATTTCC...TAGAATCCTCAATAGATTCAAATGTGTCAGTTGTTCAAGAAAATGTGATGCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR TCA 90 bp CTCCTCCTATCTGATCTCACTTTTGTCCCTGTCGTCTATTGGTTTTTATCAACGAGCTCTGAGCACAGCTaGGAAAGTGTTTCTTCAACA +
Preference number: 4 (lower is better)
Translates to: LLLSDLTFVPVVYWFLSTSSEHS*ESVSST
Trigger: TGTTGAAGAAACACTTTCTCAGCTGTGCTCAGAGCT...CGTTGATAAAAACCAATAGACGACAGGGACAAAAGTGAGATCAGATAGGAGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR TCA 90 bp CTCCTCCTATCTGATCTCACTTTTGTCCCTGTCGTCTATTGGTTTTTATCAACGGAGCACATGTCCATATaGTTTTGTGTGGCCACATTC +
Preference number: 4 (lower is better)
Translates to: LLLSDLTFVPVVYWFLSTEHMSI*FCVATF
Trigger: GAATGTGGCCACACAAAATCATATGGACATGTGCTC...CGTTGATAAAAACCAATAGACGACAGGGACAAAAGTGAGATCAGATAGGAGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR TCA 90 bp GTCTGTAAAAGCAGGTCTCAGCTAAAGCTCTCCACCGATCGTAAGCATTACCAAATTGATATATACACCTaGGATTCAGAGCACATGTCC +
Preference number: 4 (lower is better)
Translates to: VCKSRSQLKLSTDRKHYQIDIYT*DSEHMS
Trigger: GGACATGTGCTCTGAATCTCAGGTGTATATATCAAT...TTGGTAATGCTTACGATCGGTGGAGAGCTTTAGCTGAGACCTGCTTTTACAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395297.6
ENST00000482951.6
CDS-3UTR TCA 90 bp TTCCTTTTACCTAATTCGGGATATGGAGAGGTTGTACAACTGAATGTGTTGAATGATGGCATCAGCAGCTaGCGTACAGCTCAATTCAGG +
Preference number: 4 (lower is better)
Translates to: FLLPNSGYGEVVQLNVLNDGISS*RTAQFR
Trigger: CCTGAATTGAGCTGTACGTCAGCTGCTGATGCCATC...ATTCAACACATTCAGTTGTACAACCTCTCCATATCCCGAATTAGGTAAAAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR TCA 90 bp AATTCGGGATATGGAGAGGTTGTACAACTGAATGTGTTGAATGATTTCATCCAACTGTTGAGTTCCTGTTaGTGGCATCAGCAGCTGACG +
Preference number: 4 (lower is better)
Translates to: NSGYGEVVQLNVLNDFIQLLSSC*WHQQLT
Trigger: CGTCAGCTGCTGATGCCATCAACAGGAACTCAACAG...TTGGATGAAATCATTCAACACATTCAGTTGTACAACCTCTCCATATCCCGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276737.10
ENST00000467365.1
ENST00000482951.6
CDS-3UTR TCA 90 bp ACAAAAATTACGCAGAGAATGAAGACATACAAGACCATTATCTTGGCAGGCATTCTGTTGAGTTCCTGTTaGTGGCATCAGCAGCTGACG +
Preference number: 4 (lower is better)
Translates to: TKITQRMKTYKTIILAGILLSSC*WHQQLT
Trigger: CGTCAGCTGCTGATGCCATCAACAGGAACTCAACAG...AATGCCTGCCAAGATAATGGTCTTGTATGTCTTCATTCTCTGCGTAATTTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR TCA 90 bp ACAAAAATTACGCAGAGAATGAAGACATACAAGACCATTATCTTGGCAGGCATTAAGGATCCCAAAGGCTaGTGGGTGATGGGAAACAGG +
Preference number: 4 (lower is better)
Translates to: TKITQRMKTYKTIILAGIKDPKG*WVMGNR
Trigger: CCTGTTTCCCATCACCCATCAGCCTTTGGGATCCTT...AATGCCTGCCAAGATAATGGTCTTGTATGTCTTCATTCTCTGCGTAATTTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR TCA 90 bp TTACCTAATTCGGGATATGGAGAGGTTGTACAACTGAATGTGTTGAATGATTTCGGAGCCCCAGTTCTATaGAAGTCTTTACCAGCCGGA +
Preference number: 4 (lower is better)
Translates to: LPNSGYGEVVQLNVLNDFGAPVL*KSLPAG
Trigger: TCCGGCTGGTAAAGACTTTCATAGAACTGGGGCTCC...GAAATCATTCAACACATTCAGTTGTACAACCTCTCCATATCCCGAATTAGGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR TCA 90 bp CCCCCAGCATTAACTACCTGTGGTTTCCTTTTACCTAATTCGGGATATGGAGAGGCAAATGTGTCCATCTaGTTCTTTTCAGACATTAGG +
Preference number: 4 (lower is better)
Translates to: PPALTTCGFLLPNSGYGEANVSI*FFSDIR
Trigger: CCTAATGTCTGAAAAGAATCAGATGGACACATTTGC...CTCTCCATATCCCGAATTAGGTAAAAGGAAACCACAGGTAGTTAATGCTGGGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR TCA 90 bp GCCAATGAAGCTAATTCGGGATATGGAGAGGTTGTACAACTGAATGTGTTGAATAATCAGCATTATCCCTaGAGGTCAGCTGCAGTAGAG +
Preference number: 4 (lower is better)
Translates to: ANEANSGYGEVVQLNVLNNQHYP*RSAAVE
Trigger: CTCTACTGCAGCTGACCTTCAGGGATAATGCTGATT...ATTCAACACATTCAGTTGTACAACCTCTCCATATCCCGAATTAGCTTCATTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp ACATTTCAATCCTGGCTGAATGAAATGGCACATAACGGTCTTGGGGAGAAGCAACATTTCAATCCTGGCTaGATGAAATGGCACATAACG +
Preference number: 4 (lower is better)
Translates to: TFQSWLNEMAHNGLGEKQHFNPG*MKWHIT
Trigger: CGTTATGTGCCATTTCATTCAGCCAGGATTGAAATG...TTGCTTCTCCCCAAGACCGTTATGTGCCATTTCATTCAGCCAGGATTGAAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp ACACTCCTGCAAAGCTGCCCATCTGGACTCATTCCCATGGTCTGCTTTTATTTTTGCTCACTGCTGTTATaGAATAGAACTGGGATTTGT +
Preference number: 4 (lower is better)
Translates to: TLLQSCPSGLIPMVCFYFCSLLL*NRTGIC
Trigger: ACAAATCCCAGTTCTATTTCATAACAGCAGTGAGCA...AAAATAAAAGCAGACCATGGGAATGAGTCCAGATGGGCAGCTTTGCAGGAGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR GCA 90 bp ACAAAAATTACGCAGAGAATGAAGACATACAAGACCATTATCTTGGCAGGCATTGCCAGGCCAGATCCTTaGTTATCTGCTCAGCGATCT +
Preference number: 4 (lower is better)
Translates to: TKITQRMKTYKTIILAGIARPDP*LSAQRS
Trigger: AGATCGCTGAGCAGATAAGCAAGGATCTGGCCTGGC...AATGCCTGCCAAGATAATGGTCTTGTATGTCTTCATTCTCTGCGTAATTTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR GCA 90 bp AATTCGGGATATGGAGAGGTTGTACAACTGAATGTGTTGAATGATTTCATCCAAGCCAGGCCAGATCCTTaGTTATCTGCTCAGCGATCT +
Preference number: 4 (lower is better)
Translates to: NSGYGEVVQLNVLNDFIQARPDP*LSAQRS
Trigger: AGATCGCTGAGCAGATAAGCAAGGATCTGGCCTGGC...TTGGATGAAATCATTCAACACATTCAGTTGTACAACCTCTCCATATCCCGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR GCA 90 bp CTGTCTTACTTATCCCTACTGTCCAGGTTCATTCATCTCTTCCATACAACGAAAAGAAGTATCCACATCTaGCACTGGATATGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: LSYLSLLSRFIHLFHTTKRSIHI*HWICPS
Trigger: GCTGGGACATATCCAGTGGCAGATGTGGATACTTCT...TTTCGTTGTATGGAAGAGATGAATGAACCTGGACAGTAGGGATAAGTAAGACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR GCA 90 bp TTATCCCTGAAGGTCAGCTGCAGTAGAGACCCGGATTTCTTCAGTTTCTGCATGCACTCCTCTATTAAATaGTGTGTCATCCATAATGCA +
Preference number: 4 (lower is better)
Translates to: LSLKVSCSRDPDFFSFCMHSSIK*CVIHNA
Trigger: TGCATTATGGATGACACAGCATTTAATAGAGGAGTG...CATGCAGAAACTGAAGAAATCCGGGTCTCTACTGCAGCTGACCTTCAGGGATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR GCA 90 bp ACATTTCAATCCTGGCTGAATGAAATGGCACATAACGGTCTTGGGGAGAAGCAAGTTGTTGATCATTTCTaGATAAACTGGCCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: TFQSWLNEMAHNGLGEKQVVDHF*INWPCV
Trigger: CACACAGGGCCAGTTTATGCAGAAATGATCAACAAC...TTGCTTCTCCCCAAGACCGTTATGTGCCATTTCATTCAGCCAGGATTGAAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR GCA 90 bp CTTATCCCTACTGTCCAGGTTCATTCATCTCTTCCATACAACGAAATGATTCTTCTGAGCATGGGCACTTaGCTAGGTCAGGAAACACAA +
Preference number: 4 (lower is better)
Translates to: LIPTVQVHSSLPYNEMILLSMGT*LGQETQ
Trigger: TTGTGTTTCCTGACCTAGGCAAGTGCCCATGCTCAG...AAGAATCATTTCGTTGTATGGAAGAGATGAATGAACCTGGACAGTAGGGATAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp AAACTTGTATTTACCAATAGTGTCACCTTTATCCCTCTTTACCTTAAGTCACCCTTCTTGTCCGGTGTCTaGGCCACCTTTACCAAGCCA +
Preference number: 4 (lower is better)
Translates to: KLVFTNSVTFIPLYLKSPFLSGV*ATFTKP
Trigger: TGGCTTGGTAAAGGTGGCCCAGACACCGGACAAGAA...GGGTGACTTAAGGTAAAGAGGGATAAAGGTGACACTATTGGTAAATACAAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp ACTGGATATGTCCCAGCATCAGATGTTTGGCCAGTCCAACATTCATCTTCAGGCTCATCAGAATCCATTTaGGATGGTTTTATGGTAGAC +
Preference number: 4 (lower is better)
Translates to: TGYVPASDVWPVQHSSSGSSESI*DGFMVD
Trigger: GTCTACCATAAAACCATCCCAAATGGATTCTGATGA...GCCTGAAGATGAATGTTGGACTGGCCAAACATCTGATGCTGGGACATATCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR CCA 90 bp CTGTCTTACTTATCCCTACTGTCCAGGTTCATTCATCTCTTCCATACAACGAAAAGCCTGGATGCCGCTTaGCAAACTTGTGTTACTTTC +
Preference number: 4 (lower is better)
Translates to: LSYLSLLSRFIHLFHTTKSLDAA*QTCVTF
Trigger: GAAAGTAACACAAGTTTGCCAAGCGGCATCCAGGCT...TTTCGTTGTATGGAAGAGATGAATGAACCTGGACAGTAGGGATAAGTAAGACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp TTCCTTTTACCTAATTCGGGATATGGAGAGGTTGTACAACTGAATGTGTTGAATGAGGTGAGAGAAGCCTaGATGCCGCTTGGCAAACTT +
Preference number: 4 (lower is better)
Translates to: FLLPNSGYGEVVQLNVLNEVREA*MPLGKL
Trigger: AAGTTTGCCAAGCGGCATCCAGGCTTCTCTCACCTC...ATTCAACACATTCAGTTGTACAACCTCTCCATATCCCGAATTAGGTAAAAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR CCA 90 bp TTCCTTTTACCTAATTCGGGATATGGAGAGGTTGTACAACTGAATGTGTTGAATCTCCATCTTGCTGCTTaGTGTCCGCATCTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: FLLPNSGYGEVVQLNVLNLHLAA*CPHLQQ
Trigger: CTGCTGAAGATGCGGACACCAAGCAGCAAGATGGAG...ATTCAACACATTCAGTTGTACAACCTCTCCATATCCCGAATTAGGTAAAAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR CCA 90 bp CTGTCTTACTTATCCCTACTGTCCAGGTTCATTCATCTCTTCCATACAACGAAATTTAGGCATGCCCTTTaGGGTTTCCTCAAGTGCTCT +
Preference number: 4 (lower is better)
Translates to: LSYLSLLSRFIHLFHTTKFRHAL*GFLKCS
Trigger: AGAGCACTTGAGGAAACCCCAAAGGGCATGCCTAAA...TTTCGTTGTATGGAAGAGATGAATGAACCTGGACAGTAGGGATAAGTAAGACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp AGTCACTTACCAATAACAGCTTATGTTGAGTCTTCAGTCTGGTTGTTCTCCTCCCCTGCCTTCAGCTCTTaGTTTTTCAAAACCTGGGAA +
Preference number: 4 (lower is better)
Translates to: SHLPITAYVESSVWLFSSPAFSS*FFKTWE
Trigger: TTCCCAGGTTTTGAAAAACCAAGAGCTGAAGGCAGG...GGAGGAGAACAACCAGACTGAAGACTCAACATAAGCTGTTATTGGTAAGTGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp GTGAGGACCGATCGGATGATGATGTTGCCAAGAGAATGGCCAATGAAGCTAATTTTCCTCTTCCTCTGGTaGGAAATATGGTATATCAGA +
Preference number: 4 (lower is better)
Translates to: VRTDRMMMLPREWPMKLIFLFLW*EIWYIR
Trigger: TCTGATATACCATATTTCCCACCAGAGGAAGAGGAA...AATTAGCTTCATTGGCCATTCTCTTGGCAACATCATCATCCGATCGGTCCTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR CCA 90 bp AGTCACTTACCAATAACAGCTTATGTTGAGTCTTCAGTCTGGTTGTTCTCCTCCGTTGAGTCTTCAGTCTaGTTGTTCTCCTCCTATCTG +
Preference number: 4 (lower is better)
Translates to: SHLPITAYVESSVWLFSSVESSV*LFSSYL
Trigger: CAGATAGGAGGAGAACAACCAGACTGAAGACTCAAC...GGAGGAGAACAACCAGACTGAAGACTCAACATAAGCTGTTATTGGTAAGTGACT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR TCA 90 bp CTCCTCCTATCTGATCTCACTTTTGTCCCTGTCGTCTATTGGTTTTTATCAACGAGTGCAGATCCACCTTaGGTTGAAAATCTACTTCAC +
Preference number: 4 (lower is better)
Translates to: LLLSDLTFVPVVYWFLSTSADPP*VENLLH
Trigger: GTGAAGTAGATTTTCAACTCAAGGTGGATCTGCACT...CGTTGATAAAAACCAATAGACGACAGGGACAAAAGTGAGATCAGATAGGAGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR TCA 90 bp AATTCGGGATATGGAGAGGTTGTACAACTGAATGTGTTGAATGATTTCATCCAATGCAGTTCTCAGAGGTaGTGTAGAAGCTTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: NSGYGEVVQLNVLNDFIQCSSQR*CRSFPL
Trigger: CAGAGGGAAGCTTCTACATCACCTCTGAGAACTGCA...TTGGATGAAATCATTCAACACATTCAGTTGTACAACCTCTCCATATCCCGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp TCGGATGATGATGTTGCCAAGAGAATGGCCAATGAAGCTAATTCGGGATATGGAATTGATATATACACCTaGGATTCAGAGCACATGTCC +
Preference number: 4 (lower is better)
Translates to: SDDDVAKRMANEANSGYGIDIYT*DSEHMS
Trigger: GGACATGTGCTCTGAATCTCAGGTGTATATATCAAT...TCCATATCCCGAATTAGCTTCATTGGCCATTCTCTTGGCAACATCATCATCCGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp CTTTTACCTAATTCGGGATATGGAGAGGTTGTACAACTGAATGTGTTGAATGATGAGTCACCACAAAGTTaGGAGCAAGATCCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: LLPNSGYGEVVQLNVLNDESPQS*EQDPGE
Trigger: TTCCCCAGGATCTTGCTCTCAACTTTGTGGTGACTC...ATCATTCAACACATTCAGTTGTACAACCTCTCCATATCCCGAATTAGGTAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR TCA 90 bp CAAGTTAGCTTAGCTCAGTGGTATACAGAAGGCATCATATTATTGCTTTTATACTCCTCAAGTGCTCTATaGAGAGATCTGGTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: QVSLAQWYTEGIILLLLYSSSAL*RDLVLG
Trigger: CCCCAGGACCAGATCTCTTCATAGAGCACTTGAGGA...GTATAAAAGCAATAATATGATGCCTTCTGTATACCACTGAGCTAAGCTAACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR TCA 90 bp TGGGCATCACATTTTCTTGAACAACTGACACATTTGAATCTATTGAGGATTCTAGAGACCCTCAACCTCTaGGATGCCACTGTTGGAAAG +
Preference number: 4 (lower is better)
Translates to: WASHFLEQLTHLNLLRILETLNL*DATVGK
Trigger: CTTTCCAACAGTGGCATCTCAGAGGTTGAGGGTCTC...TAGAATCCTCAATAGATTCAAATGTGTCAGTTGTTCAAGAAAATGTGATGCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR TCA 90 bp CAAGTTAGCTTAGCTCAGTGGTATACAGAAGGCATCATATTATTGCTTTTATACGAGACCCTCAACCTCTaGGATGCCACTGTTGGAAAG +
Preference number: 4 (lower is better)
Translates to: QVSLAQWYTEGIILLLLYETLNL*DATVGK
Trigger: CTTTCCAACAGTGGCATCTCAGAGGTTGAGGGTCTC...GTATAAAAGCAATAATATGATGCCTTCTGTATACCACTGAGCTAAGCTAACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR TCA 90 bp CAAGTTAGCTTAGCTCAGTGGTATACAGAAGGCATCATATTATTGCTTTTATACCTGTTGAGTTCCTGTTaGTGGCATCAGCAGCTGACG +
Preference number: 4 (lower is better)
Translates to: QVSLAQWYTEGIILLLLYLLSSC*WHQQLT
Trigger: CGTCAGCTGCTGATGCCATCAACAGGAACTCAACAG...GTATAAAAGCAATAATATGATGCCTTCTGTATACCACTGAGCTAAGCTAACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR TCA 90 bp CAAGTTAGCTTAGCTCAGTGGTATACAGAAGGCATCATATTATTGCTTTTATACCCAAAGGCTGATGGGTaGTGGGAAACAGGGTCTGTT +
Preference number: 4 (lower is better)
Translates to: QVSLAQWYTEGIILLLLYPKADG*WETGSV
Trigger: AACAGACCCTGTTTCCCATCACCCATCAGCCTTTGG...GTATAAAAGCAATAATATGATGCCTTCTGTATACCACTGAGCTAAGCTAACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR TCA 90 bp CAAGTTAGCTTAGCTCAGTGGTATACAGAAGGCATCATATTATTGCTTTTATACAAGGATCCCAAAGGCTaGTGGGTGATGGGAAACAGG +
Preference number: 4 (lower is better)
Translates to: QVSLAQWYTEGIILLLLYKDPKG*WVMGNR
Trigger: CCTGTTTCCCATCACCCATCAGCCTTTGGGATCCTT...GTATAAAAGCAATAATATGATGCCTTCTGTATACCACTGAGCTAAGCTAACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR TCA 90 bp CTTATCCCTACTGTCCAGGTTCATTCATCTCTTCCATACAACGAAATGATTCTTAATCAGCATTATCCCTaGAGGTCAGCTGCAGTAGAG +
Preference number: 4 (lower is better)
Translates to: LIPTVQVHSSLPYNEMILNQHYP*RSAAVE
Trigger: CTCTACTGCAGCTGACCTTCAGGGATAATGCTGATT...AAGAATCATTTCGTTGTATGGAAGAGATGAATGAACCTGGACAGTAGGGATAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR TCA 90 bp GTCTGTAAAAGCAGGTCTCAGCTAAAGCTCTCCACCGATCGTAAGCATTACCAAAACCCATATGCATTATaGCCAGGATATAACAAGCAT +
Preference number: 4 (lower is better)
Translates to: VCKSRSQLKLSTDRKHYQNPYAL*PGYNKH
Trigger: ATGCTTGTTATATCCTGGTCATAATGCATATGGGTT...TTGGTAATGCTTACGATCGGTGGAGAGCTTTAGCTGAGACCTGCTTTTACAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR TCA 90 bp AGATGTACTTTCTACACAATTATAATAGATGCTCAGAGGCCAGAGAGGGTTTACGACCAGAGGACTCAGTaGACCCATATGCATTATGAC +
Preference number: 4 (lower is better)
Translates to: RCTFYTIIIDAQRPERVYDQRTQ*THMHYD
Trigger: GTCATAATGCATATGGGTTCACTGAGTCCTCTGGTC...GTAAACCCTCTCTGGCCTCTGAGCATCTATTATAATTGTGTAGAAAGTACATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR TCA 90 bp TGGGCATCACATTTTCTTGAACAACTGACACATTTGAATCTATTGAGGATTCTAATCCCCAGTGGAAAGTaGCCAGAGGACTCAGTGAAC +
Preference number: 4 (lower is better)
Translates to: WASHFLEQLTHLNLLRILIPSGK*PEDSVN
Trigger: GTTCACTGAGTCCTCTGGTCACTTTCCACTGGGGAT...TAGAATCCTCAATAGATTCAAATGTGTCAGTTGTTCAAGAAAATGTGATGCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR TCA 90 bp TGGGCATCACATTTTCTTGAACAACTGACACATTTGAATCTATTGAGGATTCTAGTCTATGCCCAGCTCTaGCTCGGGAGCTCAGATAAA +
Preference number: 4 (lower is better)
Translates to: WASHFLEQLTHLNLLRILVYAQL*LGSSDK
Trigger: TTTATCTGAGCTCCCGAGTCAGAGCTGGGCATAGAC...TAGAATCCTCAATAGATTCAAATGTGTCAGTTGTTCAAGAAAATGTGATGCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR GCA 90 bp GCCAATGAAGCTAATTCGGGATATGGAGAGGTTGTACAACTGAATGTGTTGAATAGATCCTTGCTTATCTaGTCAGCGATCTTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: ANEANSGYGEVVQLNVLNRSLLI*SAIFSG
Trigger: TCCAGAGAAGATCGCTGAGCAGATAAGCAAGGATCT...ATTCAACACATTCAGTTGTACAACCTCTCCATATCCCGAATTAGCTTCATTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR GCA 90 bp ATGATGATGTTGCCAAGAGAATGGCCAATGAAGCTAATTCGGGATATGGAGAGGATCTTCAGGCACACCTaGTTTGTTTTGAAATTCACC +
Preference number: 4 (lower is better)
Translates to: MMMLPREWPMKLIRDMERIFRHT*FVLKFT
Trigger: GGTGAATTTCAAAACAAAGCAGGTGTGCCTGAAGAT...CCTCTCCATATCCCGAATTAGCTTCATTGGCCATTCTCTTGGCAACATCATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR GCA 90 bp ACAAAAATTACGCAGAGAATGAAGACATACAAGACCATTATCTTGGCAGGCATTCTTCGAACAAACGGGTaGAAGACTTCCCGATCACTG +
Preference number: 4 (lower is better)
Translates to: TKITQRMKTYKTIILAGILRTNG*KTSRSL
Trigger: CAGTGATCGGGAAGTCTTGCACCCGTTTGTTCGAAG...AATGCCTGCCAAGATAATGGTCTTGTATGTCTTCATTCTCTGCGTAATTTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR GCA 90 bp GCCAATGAAGCTAATTCGGGATATGGAGAGGTTGTACAACTGAATGTGTTGAATCATGATGGAAGTGCCTaGCTTCAGCTCTTGGTTTTT +
Preference number: 4 (lower is better)
Translates to: ANEANSGYGEVVQLNVLNHDGSA*LQLLVF
Trigger: AAAAACCAAGAGCTGAAGGCAGGCACTTCCATCATG...ATTCAACACATTCAGTTGTACAACCTCTCCATATCCCGAATTAGCTTCATTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR GCA 90 bp TTACCTAATTCGGGATATGGAGAGGTTGTACAACTGAATGTGTTGAATGATTTCCAGAGTAAAGGTCTCTaGAGAAGTCAGATGGGACCC +
Preference number: 4 (lower is better)
Translates to: LPNSGYGEVVQLNVLNDFQSKGL*RSQMGP
Trigger: GGGTCCCATCTGACTTCTGCAGAGACCTTTACTCTG...GAAATCATTCAACACATTCAGTTGTACAACCTCTCCATATCCCGAATTAGGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR CCA 90 bp CTTATCCCTACTGTCCAGGTTCATTCATCTCTTCCATACAACGAAATGATTCTTAGTAAAACTGATCAATaGCTGCTGCAGAGCCACCAG +
Preference number: 4 (lower is better)
Translates to: LIPTVQVHSSLPYNEMILSKTDQ*LLQSHQ
Trigger: CTGGTGGCTCTGCAGCAGCCATTGATCAGTTTTACT...AAGAATCATTTCGTTGTATGGAAGAGATGAATGAACCTGGACAGTAGGGATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp AAACTTGTATTTACCAATAGTGTCACCTTTATCCCTCTTTACCTTAAGTCACCCACTGTGTCCAGGAACTaGGTCCACAGAGTCATCATG +
Preference number: 4 (lower is better)
Translates to: KLVFTNSVTFIPLYLKSPTVSRN*VHRVIM
Trigger: CATGATGACTCTGTGGACCCAGTTCCTGGACACAGT...GGGTGACTTAAGGTAAAGAGGGATAAAGGTGACACTATTGGTAAATACAAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp TGCAGTAGAGACCCGGATTTCTTCAGTTTCTGCATGAGCCATAAGCCTGTACTATCATCAGAATCCATTTaGGATGGTTTTATGGTAGAC +
Preference number: 4 (lower is better)
Translates to: CSRDPDFFSFCMSHKPVLSSESI*DGFMVD
Trigger: GTCTACCATAAAACCATCCCAAATGGATTCTGATGA...TAGTACAGGCTTATGGCTCATGCAGAAACTGAAGAAATCCGGGTCTCTACTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp ATTGAGAACCCTGGTCCTAGATGCGTTTCCACACTTCAGAAGGGATTTTTGCAGTCATCAGAATCCATTTaGGATGGTTTTATGGTAGAC +
Preference number: 4 (lower is better)
Translates to: IENPGPRCVSTLQKGFLQSSESI*DGFMVD
Trigger: GTCTACCATAAAACCATCCCAAATGGATTCTGATGA...CTGCAAAAATCCCTTCTGAAGTGTGGAAACGCATCTAGGACCAGGGTTCTCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp AGTCACTTACCAATAACAGCTTATGTTGAGTCTTCAGTCTGGTTGTTCTCCTCCATTCTCACCTGGCTCTaGACACCTTATAACTTCTTC +
Preference number: 4 (lower is better)
Translates to: SHLPITAYVESSVWLFSSILTWL*TPYNFF
Trigger: GAAGAAGTTATAAGGTGTCCAGAGCCAGGTGAGAAT...GGAGGAGAACAACCAGACTGAAGACTCAACATAAGCTGTTATTGGTAAGTGACT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp AAACTTGTATTTACCAATAGTGTCACCTTTATCCCTCTTTACCTTAAGTCACCCGGCCACATTCTCACCTaGCTCTGGACACCTTATAAC +
Preference number: 4 (lower is better)
Translates to: KLVFTNSVTFIPLYLKSPGHILT*LWTPYN
Trigger: GTTATAAGGTGTCCAGAGCCAGGTGAGAATGTGGCC...GGGTGACTTAAGGTAAAGAGGGATAAAGGTGACACTATTGGTAAATACAAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp CAAGTTAGCTTAGCTCAGTGGTATACAGAAGGCATCATATTATTGCTTTTATACTCTAGGGAGTTCCGGTaGAGGGCATGTCTTCGAACA +
Preference number: 4 (lower is better)
Translates to: QVSLAQWYTEGIILLLLYSREFR*RACLRT
Trigger: TGTTCGAAGACATGCCCTCCACCGGAACTCCCTAGA...GTATAAAAGCAATAATATGATGCCTTCTGTATACCACTGAGCTAAGCTAACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR CCA 90 bp AATTCGGGATATGGAGAGGTTGTACAACTGAATGTGTTGAATGATTTCATCCAAGATCCTGGGGAACCTTaGCTCTTGCTGTGCATATCT +
Preference number: 4 (lower is better)
Translates to: NSGYGEVVQLNVLNDFIQDPGEP*LLLCIS
Trigger: AGATATGCACAGCAAGAGCCAAGGTTCCCCAGGATC...TTGGATGAAATCATTCAACACATTCAGTTGTACAACCTCTCCATATCCCGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276737.10
ENST00000467365.1
ENST00000482951.6
CDS-3UTR CCA 90 bp TTACCTAATTCGGGATATGGAGAGGTTGTACAACTGAATGTGTTGAATGATTTCTTGAGAGCAAGATCCTaGGGAACCTTGGCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: LPNSGYGEVVQLNVLNDFLRARS*GTLALA
Trigger: AGCAAGAGCCAAGGTTCCCCAGGATCTTGCTCTCAA...GAAATCATTCAACACATTCAGTTGTACAACCTCTCCATATCCCGAATTAGGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR CCA 90 bp ACAAAAATTACGCAGAGAATGAAGACATACAAGACCATTATCTTGGCAGGCATTTATCCGGGGCCCTGCTaGTTGTCAGCATCTAAAACT +
Preference number: 4 (lower is better)
Translates to: TKITQRMKTYKTIILAGIYPGPC*LSASKT
Trigger: AGTTTTAGATGCTGACAACCAGCAGGGCCCCGGATA...AATGCCTGCCAAGATAATGGTCTTGTATGTCTTCATTCTCTGCGTAATTTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp AATTCGGGATATGGAGAGGTTGTACAACTGAATGTGTTGAATGATTTCATCCAATATCCGGGGCCCTGCTaGTTGTCAGCATCTAAAACT +
Preference number: 4 (lower is better)
Translates to: NSGYGEVVQLNVLNDFIQYPGPC*LSASKT
Trigger: AGTTTTAGATGCTGACAACCAGCAGGGCCCCGGATA...TTGGATGAAATCATTCAACACATTCAGTTGTACAACCTCTCCATATCCCGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276737.10
ENST00000467365.1
ENST00000482951.6
CDS-3UTR CCA 90 bp CAAGTTAGCTTAGCTCAGTGGTATACAGAAGGCATCATATTATTGCTTTTATACCCGCTTTGGCTTTGCTaGCCTGTTGAGTTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: QVSLAQWYTEGIILLLLYPLWLC*PVEFLL
Trigger: CAACAGGAACTCAACAGGCCAGCAAAGCCAAAGCGG...GTATAAAAGCAATAATATGATGCCTTCTGTATACCACTGAGCTAAGCTAACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR CCA 90 bp CAAGTTAGCTTAGCTCAGTGGTATACAGAAGGCATCATATTATTGCTTTTATACCAAGGTGAACCGCTTTaGCTTTGCTGGCCTGTTGAG +
Preference number: 4 (lower is better)
Translates to: QVSLAQWYTEGIILLLLYQGEPL*LCWPVE
Trigger: CTCAACAGGCCAGCAAAGCCAAAGCGGTTCACCTTG...GTATAAAAGCAATAATATGATGCCTTCTGTATACCACTGAGCTAAGCTAACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR CCA 90 bp AAACTTGTATTTACCAATAGTGTCACCTTTATCCCTCTTTACCTTAAGTCACCCTCTGCAGAAGTCAGATaGGACCCCATGATGGAAGTG +
Preference number: 4 (lower is better)
Translates to: KLVFTNSVTFIPLYLKSPSAEVR*DPMMEV
Trigger: CACTTCCATCATGGGGTCCCATCTGACTTCTGCAGA...GGGTGACTTAAGGTAAAGAGGGATAAAGGTGACACTATTGGTAAATACAAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp CTTTTACCTAATTCGGGATATGGAGAGGTTGTACAACTGAATGTGTTGAATGATTCTGCAGAAGTCAGATaGGACCCCATGATGGAAGTG +
Preference number: 4 (lower is better)
Translates to: LLPNSGYGEVVQLNVLNDSAEVR*DPMMEV
Trigger: CACTTCCATCATGGGGTCCCATCTGACTTCTGCAGA...ATCATTCAACACATTCAGTTGTACAACCTCTCCATATCCCGAATTAGGTAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR CCA 90 bp GCCAATGAAGCTAATTCGGGATATGGAGAGGTTGTACAACTGAATGTGTTGAATTCCAACGTGCTGGAATaGGTAGAAACAACTCCAAAG +
Preference number: 4 (lower is better)
Translates to: ANEANSGYGEVVQLNVLNSNVLE*VETTPK
Trigger: CTTTGGAGTTGTTTCTACCCATTCCAGCACGTTGGA...ATTCAACACATTCAGTTGTACAACCTCTCCATATCCCGAATTAGCTTCATTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CCA 90 bp ATTGAGAACCCTGGTCCTAGATGCGTTTCCACACTTCAGAAGGGATTTTTGCAGTACACATTTCAATCCTaGCTGAATGAAATGGCACAT +
Preference number: 4 (lower is better)
Translates to: IENPGPRCVSTLQKGFLQYTFQS*LNEMAH
Trigger: ATGTGCCATTTCATTCAGCCAGGATTGAAATGTGTA...CTGCAAAAATCCCTTCTGAAGTGTGGAAACGCATCTAGGACCAGGGTTCTCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp AAACTTGTATTTACCAATAGTGTCACCTTTATCCCTCTTTACCTTAAGTCACCCTTAAAGTGCAGTCCTTaGCTTCAACCAGAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: KLVFTNSVTFIPLYLKSPLKCSP*LQPEGP
Trigger: TGGGCCCTCTGGTTGAAGCCAAGGACTGCACTTTAA...GGGTGACTTAAGGTAAAGAGGGATAAAGGTGACACTATTGGTAAATACAAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
3UTR CAA 72 bp TTACCAATAACAGCTTATGTTGAGTCTTCAGTCTGGTaGTTCTCCTCCTATCTGATCTCACTTTTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: LPITAYVESSVW*FSSYLISLLSL
Trigger: CAGGGACAAAAGTGAGATCAGATAGGAGGAGAACAACCAGACTGAAGACTCAACATAAGCTGTTATTGGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR TCA 90 bp TTACCTAATTCGGGATATGGAGAGGTTGTACAACTGAATGTGTTGAATGATTTCCTTGCTGTGCATATCTaGAGGTTCAGCAAAACCTCC +
Preference number: 4 (lower is better)
Translates to: LPNSGYGEVVQLNVLNDFLAVHI*RFSKTS
Trigger: GGAGGTTTTGCTGAACCTTCAGATATGCACAGCAAG...GAAATCATTCAACACATTCAGTTGTACAACCTCTCCATATCCCGAATTAGGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR TCA 90 bp AAACTTGTATTTACCAATAGTGTCACCTTTATCCCTCTTTACCTTAAGTCACCCATCCATAATGCAAGGTaGACCGCTTTGGCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: KLVFTNSVTFIPLYLKSPIHNAR*TALALL
Trigger: CAGCAAAGCCAAAGCGGTTCACCTTGCATTATGGAT...GGGTGACTTAAGGTAAAGAGGGATAAAGGTGACACTATTGGTAAATACAAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR TCA 90 bp AAACTTGTATTTACCAATAGTGTCACCTTTATCCCTCTTTACCTTAAGTCACCCTTCAAAACCTGGGAATaGACGGAATGGGTCACAGTG +
Preference number: 4 (lower is better)
Translates to: KLVFTNSVTFIPLYLKSPFKTWE*TEWVTV
Trigger: CACTGTGACCCATTCCGTTCATTCCCAGGTTTTGAA...GGGTGACTTAAGGTAAAGAGGGATAAAGGTGACACTATTGGTAAATACAAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR TCA 90 bp AATTCGGGATATGGAGAGGTTGTACAACTGAATGTGTTGAATGATTTCATCCAATTCAAAACCTGGGAATaGACGGAATGGGTCACAGTG +
Preference number: 4 (lower is better)
Translates to: NSGYGEVVQLNVLNDFIQFKTWE*TEWVTV
Trigger: CACTGTGACCCATTCCGTTCATTCCCAGGTTTTGAA...TTGGATGAAATCATTCAACACATTCAGTTGTACAACCTCTCCATATCCCGAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276737.10
ENST00000467365.1
ENST00000482951.6
CDS-3UTR TCA 90 bp CTGTCTTACTTATCCCTACTGTCCAGGTTCATTCATCTCTTCCATACAACGAAAGCACAGAGATTAACCTaGGTTCTGAAATGCTTGTGT +
Preference number: 4 (lower is better)
Translates to: LSYLSLLSRFIHLFHTTKAQRLT*VLKCLC
Trigger: ACACAAGCATTTCAGAACTCAGGTTAATCTCTGTGC...TTTCGTTGTATGGAAGAGATGAATGAACCTGGACAGTAGGGATAAGTAAGACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR TCA 90 bp AGTCACTTACCAATAACAGCTTATGTTGAGTCTTCAGTCTGGTTGTTCTCCTCCTTAGAAAGGACTCACTaGGAAACCCTAAATCCATTG +
Preference number: 4 (lower is better)
Translates to: SHLPITAYVESSVWLFSSLERTH*ETLNPL
Trigger: CAATGGATTTAGGGTTTCTCAGTGAGTCCTTTCTAA...GGAGGAGAACAACCAGACTGAAGACTCAACATAAGCTGTTATTGGTAAGTGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR GCA 90 bp CTCCTCCTATCTGATCTCACTTTTGTCCCTGTCGTCTATTGGTTTTTATCAACGATCTTCAGGCACACCTaGTTTGTTTTGAAATTCACC +
Preference number: 4 (lower is better)
Translates to: LLLSDLTFVPVVYWFLSTIFRHT*FVLKFT
Trigger: GGTGAATTTCAAAACAAAGCAGGTGTGCCTGAAGAT...CGTTGATAAAAACCAATAGACGACAGGGACAAAAGTGAGATCAGATAGGAGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR GCA 90 bp AATTCGGGATATGGAGAGGTTGTACAACTGAATGTGTTGAATGATTTCATCCAACACCTACTACCACTTTaGTTAGCCCAGTCCTGTCTA +
Preference number: 4 (lower is better)
Translates to: NSGYGEVVQLNVLNDFIQHLLPL*LAQSCL
Trigger: TAGACAGGACTGGGCTAAGCAAAGTGGTAGTAGGTG...TTGGATGAAATCATTCAACACATTCAGTTGTACAACCTCTCCATATCCCGAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR GCA 90 bp AAACTTGTATTTACCAATAGTGTCACCTTTATCCCTCTTTACCTTAAGTCACCCAAACCTCCATCTTGCTaGTTGGTGTCCGCATCTTCA +
Preference number: 4 (lower is better)
Translates to: KLVFTNSVTFIPLYLKSPKPPSC*LVSASS
Trigger: TGAAGATGCGGACACCAAGCAGCAAGATGGAGGTTT...GGGTGACTTAAGGTAAAGAGGGATAAAGGTGACACTATTGGTAAATACAAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR GCA 90 bp TTACCTAATTCGGGATATGGAGAGGTTGTACAACTGAATGTGTTGAATGATTTCAAACCTCCATCTTGCTaGTTGGTGTCCGCATCTTCA +
Preference number: 4 (lower is better)
Translates to: LPNSGYGEVVQLNVLNDFKPPSC*LVSASS
Trigger: TGAAGATGCGGACACCAAGCAGCAAGATGGAGGTTT...GAAATCATTCAACACATTCAGTTGTACAACCTCTCCATATCCCGAATTAGGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR GCA 90 bp CTTTTACCTAATTCGGGATATGGAGAGGTTGTACAACTGAATGTGTTGAATGATCCTTGGCTCTTGCTGTaGATATCTGAAGGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: LLPNSGYGEVVQLNVLNDPWLLL*ISEGSA
Trigger: TGCTGAACCTTCAGATATGCACAGCAAGAGCCAAGG...ATCATTCAACACATTCAGTTGTACAACCTCTCCATATCCCGAATTAGGTAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR GCA 90 bp TTAGCTCAGTGGTATACAGAAGGCATCATATTATTGCTTTTATACAGCAAACACATGTATCCGGGGCCCTaGTGGTTGTCAGCATCTAAA +
Preference number: 4 (lower is better)
Translates to: LAQWYTEGIILLLLYSKHMYPGP*WLSASK
Trigger: TTTAGATGCTGACAACCAGCAGGGCCCCGGATACAT...GTGTTTGCTGTATAAAAGCAATAATATGATGCCTTCTGTATACCACTGAGCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR GCA 90 bp CTTTTACCTAATTCGGGATATGGAGAGGTTGTACAACTGAATGTGTTGAATGATCCTCAACCTCTGAGATaGCACTGTTGGAAAGAGCTT +
Preference number: 4 (lower is better)
Translates to: LLPNSGYGEVVQLNVLNDPQPLR*HCWKEL
Trigger: AAGCTCTTTCCAACAGTGGCATCTCAGAGGTTGAGG...ATCATTCAACACATTCAGTTGTACAACCTCTCCATATCCCGAATTAGGTAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR GCA 90 bp CTTCCCCCAGCATTAACTACCTGTGGTTTCCTTTTACCTAATTCGGGATATGGACACTCCTCTATTAAATaGTGTGTCATCCATAATGCA +
Preference number: 4 (lower is better)
Translates to: LPPALTTCGFLLPNSGYGHSSIK*CVIHNA
Trigger: TGCATTATGGATGACACAGCATTTAATAGAGGAGTG...TCCATATCCCGAATTAGGTAAAAGGAAACCACAGGTAGTTAATGCTGGGGGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR GCA 90 bp AATTCGGGATATGGAGAGGTTGTACAACTGAATGTGTTGAATGATTTCATCCAAGGAGACAGGTGGCAGTaGAAGACACAGATAAGTTCA +
Preference number: 4 (lower is better)
Translates to: NSGYGEVVQLNVLNDFIQGDRWQ*KTQISS
Trigger: TGAACTTATCTGTGTCTTGCACTGCCACCTGTCTCC...TTGGATGAAATCATTCAACACATTCAGTTGTACAACCTCTCCATATCCCGAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276737.10
ENST00000467365.1
ENST00000482951.6
CDS-3UTR GCA 90 bp ACAAAAATTACGCAGAGAATGAAGACATACAAGACCATTATCTTGGCAGGCATTTGTGGATCAGGGCTCTaGATAGAAGAATTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: TKITQRMKTYKTIILAGICGSGL*IEEFWG
Trigger: TCCCCAGAATTCTTCTATGCAGAGCCCTGATCCACA...AATGCCTGCCAAGATAATGGTCTTGTATGTCTTCATTCTCTGCGTAATTTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR GCA 90 bp TGGGCATCACATTTTCTTGAACAACTGACACATTTGAATCTATTGAGGATTCTAACATGTCTACACTCCTaGAAAGCTGCCCATCTGGAC +
Preference number: 4 (lower is better)
Translates to: WASHFLEQLTHLNLLRILTCLHS*KAAHLD
Trigger: GTCCAGATGGGCAGCTTTGCAGGAGTGTAGACATGT...TAGAATCCTCAATAGATTCAAATGTGTCAGTTGTTCAAGAAAATGTGATGCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR GCA 90 bp CTGTCTTACTTATCCCTACTGTCCAGGTTCATTCATCTCTTCCATACAACGAAAAAACACAATACCATGTaGTGCACGACTAGGGAACAA +
Preference number: 4 (lower is better)
Translates to: LSYLSLLSRFIHLFHTTKKHNTM*CTTREQ
Trigger: TTGTTCCCTAGTCGTGCAGCACATGGTATTGTGTTT...TTTCGTTGTATGGAAGAGATGAATGAACCTGGACAGTAGGGATAAGTAAGACAG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp ACACTCCTGCAAAGCTGCCCATCTGGACTCATTCCCATGGTCTGCTTTTATTTTTGTAGGACTTGTCACTaGAACATCAAAATTAGGATA +
Preference number: 4 (lower is better)
Translates to: TLLQSCPSGLIPMVCFYFCRTCH*NIKIRI
Trigger: TATCCTAATTTTGATGTTCCAGTGACAAGTCCTACA...AAAATAAAAGCAGACCATGGGAATGAGTCCAGATGGGCAGCTTTGCAGGAGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp GTCTGTAAAAGCAGGTCTCAGCTAAAGCTCTCCACCGATCGTAAGCATTACCAATGTAGGACTTGTCACTaGAACATCAAAATTAGGATA +
Preference number: 4 (lower is better)
Translates to: VCKSRSQLKLSTDRKHYQCRTCH*NIKIRI
Trigger: TATCCTAATTTTGATGTTCCAGTGACAAGTCCTACA...TTGGTAATGCTTACGATCGGTGGAGAGCTTTAGCTGAGACCTGCTTTTACAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395297.6
ENST00000482951.6
CDS-3UTR CCA 90 bp ACAAAAATTACGCAGAGAATGAAGACATACAAGACCATTATCTTGGCAGGCATTATCCACATCTGCCACTaGATATGTCCCAGCATCAGA +
Preference number: 4 (lower is better)
Translates to: TKITQRMKTYKTIILAGIIHICH*ICPSIR
Trigger: TCTGATGCTGGGACATATCCAGTGGCAGATGTGGAT...AATGCCTGCCAAGATAATGGTCTTGTATGTCTTCATTCTCTGCGTAATTTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp TGGGCATCACATTTTCTTGAACAACTGACACATTTGAATCTATTGAGGATTCTAGCTTCCCTTTCCCTTTaGGGATGTCTATGTATCCGG +
Preference number: 4 (lower is better)
Translates to: WASHFLEQLTHLNLLRILASLSL*GCLCIR
Trigger: CCGGATACATAGACATCCCCAAAGGGAAAGGGAAGC...TAGAATCCTCAATAGATTCAAATGTGTCAGTTGTTCAAGAAAATGTGATGCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp CAAGTTAGCTTAGCTCAGTGGTATACAGAAGGCATCATATTATTGCTTTTATACGCTTCCCTTTCCCTTTaGGGATGTCTATGTATCCGG +
Preference number: 4 (lower is better)
Translates to: QVSLAQWYTEGIILLLLYASLSL*GCLCIR
Trigger: CCGGATACATAGACATCCCCAAAGGGAAAGGGAAGC...GTATAAAAGCAATAATATGATGCCTTCTGTATACCACTGAGCTAAGCTAACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR CCA 90 bp AATTCGGGATATGGAGAGGTTGTACAACTGAATGTGTTGAATGATTTCATCCAATTTGGTTTCAACACCTaGAGTGTTCTCAGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: NSGYGEVVQLNVLNDFIQFGFNT*SVLSPA
Trigger: GGCAGGACTGAGAACACTCCAGGTGTTGAAACCAAA...TTGGATGAAATCATTCAACACATTCAGTTGTACAACCTCTCCATATCCCGAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276737.10
ENST00000467365.1
ENST00000482951.6
CDS-3UTR CCA 90 bp CTTTTACCTAATTCGGGATATGGAGAGGTTGTACAACTGAATGTGTTGAATGATTTTAGGCATGCCCTTTaGGGTTTCCTCAAGTGCTCT +
Preference number: 4 (lower is better)
Translates to: LLPNSGYGEVVQLNVLNDFRHAL*GFLKCS
Trigger: AGAGCACTTGAGGAAACCCCAAAGGGCATGCCTAAA...ATCATTCAACACATTCAGTTGTACAACCTCTCCATATCCCGAATTAGGTAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR CCA 90 bp TTAGCTCAGTGGTATACAGAAGGCATCATATTATTGCTTTTATACAGCAAACACGAAACAGGGTCTGTTTaGAAGAGAATCCAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: LAQWYTEGIILLLLYSKHETGSV*KRIQPW
Trigger: CCAGGGCTGGATTCTCTTCCAAACAGACCCTGTTTC...GTGTTTGCTGTATAAAAGCAATAATATGATGCCTTCTGTATACCACTGAGCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR CCA 90 bp CTCCTCCTATCTGATCTCACTTTTGTCCCTGTCGTCTATTGGTTTTTATCAACGTTCTTCCTCTTCCTCTaGTGGGAAATATGGTATATC +
Preference number: 4 (lower is better)
Translates to: LLLSDLTFVPVVYWFLSTFFLFL*WEIWYI
Trigger: GATATACCATATTTCCCACCAGAGGAAGAGGAAGAA...CGTTGATAAAAACCAATAGACGACAGGGACAAAAGTGAGATCAGATAGGAGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp GTCTGTAAAAGCAGGTCTCAGCTAAAGCTCTCCACCGATCGTAAGCATTACCAAGTTAAAAATGGCATCTaGTTATTGGAGAAGATGATG +
Preference number: 4 (lower is better)
Translates to: VCKSRSQLKLSTDRKHYQVKNGI*LLEKMM
Trigger: CATCATCTTCTCCAATAACCAGATGCCATTTTTAAC...TTGGTAATGCTTACGATCGGTGGAGAGCTTTAGCTGAGACCTGCTTTTACAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR TCA 90 bp ACAAAAATTACGCAGAGAATGAAGACATACAAGACCATTATCTTGGCAGGCATTACCATCTTCCCCTCTTaGTCTATTCCCTTTCCTAGA +
Preference number: 4 (lower is better)
Translates to: TKITQRMKTYKTIILAGITIFPS*SIPFPR
Trigger: TCTAGGAAAGGGAATAGATCAAGAGGGGAAGATGGT...AATGCCTGCCAAGATAATGGTCTTGTATGTCTTCATTCTCTGCGTAATTTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR TCA 90 bp AGTCACTTACCAATAACAGCTTATGTTGAGTCTTCAGTCTGGTTGTTCTCCTCCGGTTTTCAAGTGCTATaGCGCGTGGTATTTTTAAAT +
Preference number: 4 (lower is better)
Translates to: SHLPITAYVESSVWLFSSGFQVL*RVVFLN
Trigger: ATTTAAAAATACCACGCGTCATAGCACTTGAAAACC...GGAGGAGAACAACCAGACTGAAGACTCAACATAAGCTGTTATTGGTAAGTGACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR TCA 90 bp CTTATCCCTACTGTCCAGGTTCATTCATCTCTTCCATACAACGAAATGATTCTTTTGGAAAGAGCTTGCTaGCCCACATTCAAGTCTTTA +
Preference number: 4 (lower is better)
Translates to: LIPTVQVHSSLPYNEMILLERAC*PTFKSL
Trigger: TAAAGACTTGAATGTGGGTCAGCAAGCTCTTTCCAA...AAGAATCATTTCGTTGTATGGAAGAGATGAATGAACCTGGACAGTAGGGATAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR TCA 90 bp TTAGCTCAGTGGTATACAGAAGGCATCATATTATTGCTTTTATACAGCAAACACATCCATAATGCAAGGTaGACCGCTTTGGCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: LAQWYTEGIILLLLYSKHIHNAR*TALALL
Trigger: CAGCAAAGCCAAAGCGGTTCACCTTGCATTATGGAT...GTGTTTGCTGTATAAAAGCAATAATATGATGCCTTCTGTATACCACTGAGCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR TCA 90 bp CTGTCTTACTTATCCCTACTGTCCAGGTTCATTCATCTCTTCCATACAACGAAAGTTGAAGCTTCATTCTaGAATGGTGAGGTCTGTAAA +
Preference number: 4 (lower is better)
Translates to: LSYLSLLSRFIHLFHTTKVEASF*NGEVCK
Trigger: TTTACAGACCTCACCATTTCAGAATGAAGCTTCAAC...TTTCGTTGTATGGAAGAGATGAATGAACCTGGACAGTAGGGATAAGTAAGACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR TCA 90 bp TGGGCATCACATTTTCTTGAACAACTGACACATTTGAATCTATTGAGGATTCTATTCTTAGAGCTCCCCTaGGGTTTTAATCCAGCACTC +
Preference number: 4 (lower is better)
Translates to: WASHFLEQLTHLNLLRILFLELP*GFNPAL
Trigger: GAGTGCTGGATTAAAACCTCAGGGGAGCTCTAAGAA...TAGAATCCTCAATAGATTCAAATGTGTCAGTTGTTCAAGAAAATGTGATGCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR TCA 90 bp CTGTCTTACTTATCCCTACTGTCCAGGTTCATTCATCTCTTCCATACAACGAAATCAGTCTTTGAGACCTaGCTATTAAACATCCTGGTA +
Preference number: 4 (lower is better)
Translates to: LSYLSLLSRFIHLFHTTKSVFET*LLNILV
Trigger: TACCAGGATGTTTAATAGTCAGGTCTCAAAGACTGA...TTTCGTTGTATGGAAGAGATGAATGAACCTGGACAGTAGGGATAAGTAAGACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR GCA 90 bp TTACCTAATTCGGGATATGGAGAGGTTGTACAACTGAATGTGTTGAATGATTTCTGGGGTTTCCTCAAGTaGTCTATGAAGAGATCTGGT +
Preference number: 4 (lower is better)
Translates to: LPNSGYGEVVQLNVLNDFWGFLK*SMKRSG
Trigger: ACCAGATCTCTTCATAGAGCACTTGAGGAAACCCCA...GAAATCATTCAACACATTCAGTTGTACAACCTCTCCATATCCCGAATTAGGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR GCA 90 bp CTTTTACCTAATTCGGGATATGGAGAGGTTGTACAACTGAATGTGTTGAATGATCATGATGGAAGTGCCTaGCTTCAGCTCTTGGTTTTT +
Preference number: 4 (lower is better)
Translates to: LLPNSGYGEVVQLNVLNDHDGSA*LQLLVF
Trigger: AAAAACCAAGAGCTGAAGGCAGGCACTTCCATCATG...ATCATTCAACACATTCAGTTGTACAACCTCTCCATATCCCGAATTAGGTAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR GCA 90 bp TGGGCATCACATTTTCTTGAACAACTGACACATTTGAATCTATTGAGGATTCTAGGAGACAGGTGGCAGTaGAAGACACAGATAAGTTCA +
Preference number: 4 (lower is better)
Translates to: WASHFLEQLTHLNLLRILGDRWQ*KTQISS
Trigger: TGAACTTATCTGTGTCTTGCACTGCCACCTGTCTCC...TAGAATCCTCAATAGATTCAAATGTGTCAGTTGTTCAAGAAAATGTGATGCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR GCA 90 bp CTTATCCCTACTGTCCAGGTTCATTCATCTCTTCCATACAACGAAATGATTCTTGTTGTTGATCATTTCTaGATAAACTGGCCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: LIPTVQVHSSLPYNEMILVVDHF*INWPCV
Trigger: CACACAGGGCCAGTTTATGCAGAAATGATCAACAAC...AAGAATCATTTCGTTGTATGGAAGAGATGAATGAACCTGGACAGTAGGGATAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR GCA 90 bp GAAGCTAATTCGGGATATGGAGAGGTTGTACAACTGAATGTGTTGAATGATTTCGTTGTTGATCATTTCTaGATAAACTGGCCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: EANSGYGEVVQLNVLNDFVVDHF*INWPCV
Trigger: CACACAGGGCCAGTTTATGCAGAAATGATCAACAAC...GAAATCATTCAACACATTCAGTTGTACAACCTCTCCATATCCCGAATTAGCTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR GCA 90 bp AGATGTACTTTCTACACAATTATAATAGATGCTCAGAGGCCAGAGAGGGTTTACCATTGTGTGGAACTCTaGCTTTGCAAGACATTCAAC +
Preference number: 4 (lower is better)
Translates to: RCTFYTIIIDAQRPERVYHCVEL*LCKTFN
Trigger: GTTGAATGTCTTGCAAAGGCAGAGTTCCACACAATG...GTAAACCCTCTCTGGCCTCTGAGCATCTATTATAATTGTGTAGAAAGTACATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp AAACTTGTATTTACCAATAGTGTCACCTTTATCCCTCTTTACCTTAAGTCACCCCCACAGCATCATTTATaGGTACCTCTTCATTCCGGT +
Preference number: 4 (lower is better)
Translates to: KLVFTNSVTFIPLYLKSPPQHHL*VPLHSG
Trigger: ACCGGAATGAAGAGGTACCCATAAATGATGCTGTGG...GGGTGACTTAAGGTAAAGAGGGATAAAGGTGACACTATTGGTAAATACAAGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp TGGGCATCACATTTTCTTGAACAACTGACACATTTGAATCTATTGAGGATTCTACCAGGAGCCTCTTCCTaGACGAGTAAAACTGATCAA +
Preference number: 4 (lower is better)
Translates to: WASHFLEQLTHLNLLRILPGASS*TSKTDQ
Trigger: TTGATCAGTTTTACTCGTCCAGGAAGAGGCTCCTGG...TAGAATCCTCAATAGATTCAAATGTGTCAGTTGTTCAAGAAAATGTGATGCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp CTCCTCCTATCTGATCTCACTTTTGTCCCTGTCGTCTATTGGTTTTTATCAACGAGAATCCATTTGGGATaGTTTTATGGTAGACAAGAC +
Preference number: 4 (lower is better)
Translates to: LLLSDLTFVPVVYWFLSTRIHLG*FYGRQD
Trigger: GTCTTGTCTACCATAAAACCATCCCAAATGGATTCT...CGTTGATAAAAACCAATAGACGACAGGGACAAAAGTGAGATCAGATAGGAGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp AAACTTGTATTTACCAATAGTGTCACCTTTATCCCTCTTTACCTTAAGTCACCCCCATATGATTTTGTGTaGCCACATTCTCACCTGGCT +
Preference number: 4 (lower is better)
Translates to: KLVFTNSVTFIPLYLKSPPYDFV*PHSHLA
Trigger: AGCCAGGTGAGAATGTGGCCACACAAAATCATATGG...GGGTGACTTAAGGTAAAGAGGGATAAAGGTGACACTATTGGTAAATACAAGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp CTTTTACCTAATTCGGGATATGGAGAGGTTGTACAACTGAATGTGTTGAATGATTCCAACGTGCTGGAATaGGTAGAAACAACTCCAAAG +
Preference number: 4 (lower is better)
Translates to: LLPNSGYGEVVQLNVLNDSNVLE*VETTPK
Trigger: CTTTGGAGTTGTTTCTACCCATTCCAGCACGTTGGA...ATCATTCAACACATTCAGTTGTACAACCTCTCCATATCCCGAATTAGGTAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR CCA 90 bp AGATGTACTTTCTACACAATTATAATAGATGCTCAGAGGCCAGAGAGGGTTTACCATTTCTGCATAAACTaGCCCTGTGTGTCTGTCTTT +
Preference number: 4 (lower is better)
Translates to: RCTFYTIIIDAQRPERVYHFCIN*PCVSVF
Trigger: AAAGACAGACACACAGGGCCAGTTTATGCAGAAATG...GTAAACCCTCTCTGGCCTCTGAGCATCTATTATAATTGTGTAGAAAGTACATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp GCCAATGAAGCTAATTCGGGATATGGAGAGGTTGTACAACTGAATGTGTTGAATTTCTTCCTCTTCCTCTaGTGGGAAATATGGTATATC +
Preference number: 4 (lower is better)
Translates to: ANEANSGYGEVVQLNVLNFFLFL*WEIWYI
Trigger: GATATACCATATTTCCCACCAGAGGAAGAGGAAGAA...ATTCAACACATTCAGTTGTACAACCTCTCCATATCCCGAATTAGCTTCATTGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR CCA 90 bp AGATGTACTTTCTACACAATTATAATAGATGCTCAGAGGCCAGAGAGGGTTTACCCTAAATCCATTGTGTaGAACTCTGCCTTTGCAAGA +
Preference number: 4 (lower is better)
Translates to: RCTFYTIIIDAQRPERVYPKSIV*NSAFAR
Trigger: TCTTGCAAAGGCAGAGTTCCACACAATGGATTTAGG...GTAAACCCTCTCTGGCCTCTGAGCATCTATTATAATTGTGTAGAAAGTACATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR TCA 90 bp CTTTTACCTAATTCGGGATATGGAGAGGTTGTACAACTGAATGTGTTGAATGATTTGGAAAGAGCTTGCTaGCCCACATTCAAGTCTTTA +
Preference number: 4 (lower is better)
Translates to: LLPNSGYGEVVQLNVLNDLERAC*PTFKSL
Trigger: TAAAGACTTGAATGTGGGTCAGCAAGCTCTTTCCAA...ATCATTCAACACATTCAGTTGTACAACCTCTCCATATCCCGAATTAGGTAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR TCA 90 bp ACAAAAATTACGCAGAGAATGAAGACATACAAGACCATTATCTTGGCAGGCATTATTGGAAACACAACATaGAATGCACTCATCAGAGGG +
Preference number: 4 (lower is better)
Translates to: TKITQRMKTYKTIILAGIIGNTT*NALIRG
Trigger: CCCTCTGATGAGTGCATTTCATGTTGTGTTTCCAAT...AATGCCTGCCAAGATAATGGTCTTGTATGTCTTCATTCTCTGCGTAATTTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR GCA 90 bp ACAAAAATTACGCAGAGAATGAAGACATACAAGACCATTATCTTGGCAGGCATTCTGAAATGTCAGGACTaGAAGTTTTTGGTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: TKITQRMKTYKTIILAGILKCQD*KFLVLH
Trigger: ATGGAGCACCAAAAACTTGCAGTCCTGACATTTCAG...AATGCCTGCCAAGATAATGGTCTTGTATGTCTTCATTCTCTGCGTAATTTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR GCA 90 bp AGATGTACTTTCTACACAATTATAATAGATGCTCAGAGGCCAGAGAGGGTTTACGATTTCTTCAGTTTCTaGATGAGCCATAAGCCTGTA +
Preference number: 4 (lower is better)
Translates to: RCTFYTIIIDAQRPERVYDFFSF*MSHKPV
Trigger: TACAGGCTTATGGCTCATGCAGAAACTGAAGAAATC...GTAAACCCTCTCTGGCCTCTGAGCATCTATTATAATTGTGTAGAAAGTACATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR GCA 90 bp AAACTTGTATTTACCAATAGTGTCACCTTTATCCCTCTTTACCTTAAGTCACCCCACAATTATAATAGATaGTCAGAGGCCAGAGAGGGT +
Preference number: 4 (lower is better)
Translates to: KLVFTNSVTFIPLYLKSPHNYNR*SEAREG
Trigger: ACCCTCTCTGGCCTCTGAGCATCTATTATAATTGTG...GGGTGACTTAAGGTAAAGAGGGATAAAGGTGACACTATTGGTAAATACAAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp TTAGCTCAGTGGTATACAGAAGGCATCATATTATTGCTTTTATACAGCAAACACCCTGCCTTCAGCTCTTaGTTTTTCAAAACCTGGGAA +
Preference number: 4 (lower is better)
Translates to: LAQWYTEGIILLLLYSKHPAFSS*FFKTWE
Trigger: TTCCCAGGTTTTGAAAAACCAAGAGCTGAAGGCAGG...GTGTTTGCTGTATAAAAGCAATAATATGATGCCTTCTGTATACCACTGAGCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR CCA 90 bp TGGGCATCACATTTTCTTGAACAACTGACACATTTGAATCTATTGAGGATTCTATCCAACGTGCTGGAATaGGTAGAAACAACTCCAAAG +
Preference number: 4 (lower is better)
Translates to: WASHFLEQLTHLNLLRILSNVLE*VETTPK
Trigger: CTTTGGAGTTGTTTCTACCCATTCCAGCACGTTGGA...TAGAATCCTCAATAGATTCAAATGTGTCAGTTGTTCAAGAAAATGTGATGCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp CTGTCTTACTTATCCCTACTGTCCAGGTTCATTCATCTCTTCCATACAACGAAAGAGCTTAGATTTACTTaGTTTTGTTACCATGGCATC +
Preference number: 4 (lower is better)
Translates to: LSYLSLLSRFIHLFHTTKELRFT*FCYHGI
Trigger: GATGCCATGGTAACAAAACCAAGTAAATCTAAGCTC...TTTCGTTGTATGGAAGAGATGAATGAACCTGGACAGTAGGGATAAGTAAGACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR TCA 90 bp GAAGCTAATTCGGGATATGGAGAGGTTGTACAACTGAATGTGTTGAATGATTTCGGTTTTCAAGTGCTATaGCGCGTGGTATTTTTAAAT +
Preference number: 4 (lower is better)
Translates to: EANSGYGEVVQLNVLNDFGFQVL*RVVFLN
Trigger: ATTTAAAAATACCACGCGTCATAGCACTTGAAAACC...GAAATCATTCAACACATTCAGTTGTACAACCTCTCCATATCCCGAATTAGCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR TCA 90 bp ACAAAAATTACGCAGAGAATGAAGACATACAAGACCATTATCTTGGCAGGCATTACACAGACAACCAGGTaGATTCCATCTTCCAAATTT +
Preference number: 4 (lower is better)
Translates to: TKITQRMKTYKTIILAGITQTTR*IPSSKF
Trigger: AAATTTGGAAGATGGAATTCACCTGGTTGTCTGTGT...AATGCCTGCCAAGATAATGGTCTTGTATGTCTTCATTCTCTGCGTAATTTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR TCA 90 bp ACAAAAATTACGCAGAGAATGAAGACATACAAGACCATTATCTTGGCAGGCATTTTTTTATCAACGCAGTaGCCTTTCCTAGCCCTTTAT +
Preference number: 4 (lower is better)
Translates to: TKITQRMKTYKTIILAGIFLSTQ*PFLALY
Trigger: ATAAAGGGCTAGGAAAGGTCACTGCGTTGATAAAAA...AATGCCTGCCAAGATAATGGTCTTGTATGTCTTCATTCTCTGCGTAATTTTTGT
38% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR GCA 90 bp CTTATCCCTACTGTCCAGGTTCATTCATCTCTTCCATACAACGAAATGATTCTTCACTCCTCTATTAAATaGTGTGTCATCCATAATGCA +
Preference number: 4 (lower is better)
Translates to: LIPTVQVHSSLPYNEMILHSSIK*CVIHNA
Trigger: TGCATTATGGATGACACAGCATTTAATAGAGGAGTG...AAGAATCATTTCGTTGTATGGAAGAGATGAATGAACCTGGACAGTAGGGATAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR GCA 90 bp ACAAAAATTACGCAGAGAATGAAGACATACAAGACCATTATCTTGGCAGGCATTACAAATATGTTCCACTaGTGCACAGAGATTAACCTG +
Preference number: 4 (lower is better)
Translates to: TKITQRMKTYKTIILAGITNMFH*CTEINL
Trigger: CAGGTTAATCTCTGTGCAGCAGTGGAACATATTTGT...AATGCCTGCCAAGATAATGGTCTTGTATGTCTTCATTCTCTGCGTAATTTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp TGGGCATCACATTTTCTTGAACAACTGACACATTTGAATCTATTGAGGATTCTAAACATAGCATGTCTTTaGAAGTGTATCAGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: WASHFLEQLTHLNLLRILNIACL*KCISRS
Trigger: GCTCCTGCTGATACACTTCCAAAGACATGCTATGTT...TAGAATCCTCAATAGATTCAAATGTGTCAGTTGTTCAAGAAAATGTGATGCCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CCA 90 bp AATTCGGGATATGGAGAGGTTGTACAACTGAATGTGTTGAATGATTTCATCCAAGTTAGCTTAGCTCAGTaGTATACAGAAGGCATCATA +
Preference number: 4 (lower is better)
Translates to: NSGYGEVVQLNVLNDFIQVSLAQ*YTEGII
Trigger: TATGATGCCTTCTGTATACCACTGAGCTAAGCTAAC...TTGGATGAAATCATTCAACACATTCAGTTGTACAACCTCTCCATATCCCGAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR TCA 90 bp AAACTTGTATTTACCAATAGTGTCACCTTTATCCCTCTTTACCTTAAGTCACCCCTTGTATTTCAGACATaGTCTTTTTGGCTCATTACC +
Preference number: 4 (lower is better)
Translates to: KLVFTNSVTFIPLYLKSPLVFQT*SFWLIT
Trigger: GGTAATGAGCCAAAAAGATCATGTCTGAAATACAAG...GGGTGACTTAAGGTAAAGAGGGATAAAGGTGACACTATTGGTAAATACAAGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR TCA 90 bp TTCCTTTTACCTAATTCGGGATATGGAGAGGTTGTACAACTGAATGTGTTGAATGGTTTTCAAGTGCTATaGCGCGTGGTATTTTTAAAT +
Preference number: 4 (lower is better)
Translates to: FLLPNSGYGEVVQLNVLNGFQVL*RVVFLN
Trigger: ATTTAAAAATACCACGCGTCATAGCACTTGAAAACC...ATTCAACACATTCAGTTGTACAACCTCTCCATATCCCGAATTAGGTAAAAGGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR TCA 90 bp CAAGTTAGCTTAGCTCAGTGGTATACAGAAGGCATCATATTATTGCTTTTATACACACAGACAACCAGGTaGATTCCATCTTCCAAATTT +
Preference number: 4 (lower is better)
Translates to: QVSLAQWYTEGIILLLLYTQTTR*IPSSKF
Trigger: AAATTTGGAAGATGGAATTCACCTGGTTGTCTGTGT...GTATAAAAGCAATAATATGATGCCTTCTGTATACCACTGAGCTAAGCTAACTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR CCA 90 bp GAAGCTAATTCGGGATATGGAGAGGTTGTACAACTGAATGTGTTGAATGATTTCTGTAGGACTTGTCACTaGAACATCAAAATTAGGATA +
Preference number: 4 (lower is better)
Translates to: EANSGYGEVVQLNVLNDFCRTCH*NIKIRI
Trigger: TATCCTAATTTTGATGTTCCAGTGACAAGTCCTACA...GAAATCATTCAACACATTCAGTTGTACAACCTCTCCATATCCCGAATTAGCTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
3UTR CAA 72 bp ACAAATTCAAGCAAAGTTTGTTGTCATTTAGTCTATTaGCTCAGCTTTCTCGAATCTCCAAAACAAAAGCAC +
Preference number: 4 (lower is better)
Translates to: TNSSKVCCHLVY*LSFLESPKQKH
Trigger: GTGCTTTTGTTTTGGAGATTCGAGAAAGCTGAGCAAATAGACTAAATGACAACAAACTTTGCTTGAATTTGT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395297.6
ENST00000482951.6
3UTR CAA 72 bp AGTATGTCCCTAGAGTCATGTTTCTTTGTAACAAACTaGTATTTACCAATAGTGTCACCTTTATCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: SMSLESCFFVTN*YLPIVSPLSLF
Trigger: AAAGAGGGATAAAGGTGACACTATTGGTAAATACAAGTTTGTTACAAAGAAACATGACTCTAGGGACATACT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS CCA 90 bp GGCGGCGGCGGCGGGCGGACTGGGGAGTCCGCAGCACCTGCGAGCTaGTGTTGGGTCCCCGCGGCGAGGCTGCCTGGAGGAGGAGCGAGC +
Preference number: 5 (lower is better)
Translates to: GGGGGRTGESAAPAS*CWVPAARLPGGGAS
Trigger: GCTCGCTCCTCCTCCAGGCAGCCTCGCCGCGGGGACCCAACACCAGCTCGCAGGTGCTGCGGACTCCCCAGTCCGCCCGCCGCCGCCGCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS GCA 90 bp GGGAACGCAGCCGCCAGCGCCGCAAGAAAGCAAGGACCGACCGGCTaGGCCCGCGCCGCTGGGCTGGCGCCTCCCGGGCTGCGCTCACCT +
Preference number: 5 (lower is better)
Translates to: GNAAASAARKQGPTG*ARAAGLAPPGLRSP
Trigger: AGGTGAGCGCAGCCCGGGAGGCGCCAGCCCAGCGGCGCGGGCGCAGCCGGTCGGTCCTTGCTTTCTTGCGGCGCTGGCGGCTGCGTTCCC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS CCA 90 bp GTCTCTGGCCGCCAACAGTTGCGGCGGCGGCGGCGGCGGGCGGACTaGGGAGTCCGCAGCACCTGCGAGCTGGTGTTGGGTCCCCGCGGC +
Preference number: 5 (lower is better)
Translates to: VSGRQQLRRRRRRAD*GVRSTCELVLGPRG
Trigger: GCCGCGGGGACCCAACACCAGCTCGCAGGTGCTGCGGACTCCCCAGTCCGCCCGCCGCCGCCGCCGCCGCAACTGTTGGCGGCCAGAGAC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS CCA 90 bp GGCGGCGGGCGGACTGGGGAGTCCGCAGCACCTGCGAGCTGGTGTTaGGTCCCCGCGGCGAGGCTGCCTGGAGGAGGAGCGAGCGGATGC +
Preference number: 5 (lower is better)
Translates to: GGGRTGESAAPASWC*VPAARLPGGGASGC
Trigger: GCATCCGCTCGCTCCTCCTCCAGGCAGCCTCGCCGCGGGGACCCAACACCAGCTCGCAGGTGCTGCGGACTCCCCAGTCCGCCCGCCGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS GCA 90 bp TGTTGGGTCCCCGCGGCGAGGCTGCCTGGAGGAGGAGCGAGCGGATaGTGCCCTCGCCCGCCGCCGCCGGTGCTGATGCGGTTGCTATGG +
Preference number: 5 (lower is better)
Translates to: CWVPAARLPGGGASG*CPRPPPPVLMRLLW
Trigger: CCATAGCAACCGCATCAGCACCGGCGGCGGCGGGCGAGGGCAGCATCCGCTCGCTCCTCCTCCAGGCAGCCTCGCCGCGGGGACCCAACA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS GCA 90 bp TGGGTCCCTCTCTCTCCTCTTTCGCCGTCTCTGGCCGCCAACAGTTaGGGCGGCGGCGGCGGCGGGCGGACTGGGGAGTCCGCAGCACCT +
Preference number: 5 (lower is better)
Translates to: WVPLSPLSPSLAANS*GGGGGGRTGESAAP
Trigger: AGGTGCTGCGGACTCCCCAGTCCGCCCGCCGCCGCCGCCGCCGCAACTGTTGGCGGCCAGAGACGGCGAAAGAGGAGAGAGAGGGACCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000395297.6
CDS GCA 90 bp TGGGTCCCCGCGGCGAGGCTGCCTGGAGGAGGAGCGAGCGGATGCTaGCCTCGCCCGCCGCCGCCGGTGCTGATGCGGTTGCTATGGTTA +
Preference number: 5 (lower is better)
Translates to: WVPAARLPGGGASGC*PRPPPPVLMRLLWL
Trigger: TAACCATAGCAACCGCATCAGCACCGGCGGCGGCGGGCGAGGGCAGCATCCGCTCGCTCCTCCTCCAGGCAGCCTCGCCGCGGGGACCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS GCA 90 bp GCCGCCGGTGCTGATGCGGTTGCTATGGTTATGGAACCCCGCAACTaGCCCCCTCTCCGTGCAACAGCTGCCCGGCCGCGGCCTCCGGGC +
Preference number: 5 (lower is better)
Translates to: AAGADAVAMVMEPRN*PPLRATAARPRPPG
Trigger: GCCCGGAGGCCGCGGCCGGGCAGCTGTTGCACGGAGAGGGGGGCAGTTGCGGGGTTCCATAACCATAGCAACCGCATCAGCACCGGCGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CAA 90 bp GCGGCTCGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACACGTTGCCTCCATCTTGCTGCTaGGTGTCCGCATCTTCAGCA +
Preference number: 5 (lower is better)
Translates to: AARPIRVLAVLGRAWNTLPPSCC*VSASSA
Trigger: TGCTGAAGATGCGGACACCAAGCAGCAAGATGGAGG...CAACGTGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCGAGCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CAA 90 bp CGGCTCGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACACGTTGTTCTGAGGAAGTCGGCTaGCAGTACCCAGCTCCAAAG +
Preference number: 5 (lower is better)
Translates to: RLGRSGCWQCWAGRGTRCSEEVG*QYPAPK
Trigger: CTTTGGAGCTGGGTACTGCAAGCCGACTTCCTCAGA...ACAACGTGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCGAGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CAA 90 bp AGCGGCTCGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACACGTTCCGGGGCCCTGCTGGTaGTCAGCATCTAAAACTATC +
Preference number: 5 (lower is better)
Translates to: SGSADQGVGSVGQGVEHVPGPCW*SASKTI
Trigger: GATAGTTTTAGATGCTGACAACCAGCAGGGCCCCGG...AACGTGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCGAGCCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CAA 90 bp GGAGGGCATGTCTTCGAACAAACGGGTGCAAGACTTCCCGATCACTGGGCAACTCGGCCGATCAGGGTGTaGGCAGTGTTGGGCAGGGCG +
Preference number: 5 (lower is better)
Translates to: GGHVFEQTGARLPDHWATRPIRV*AVLGRA
Trigger: CGCCCTGCCCAACACTGCCAACACCCTGATCGGCCG...AGTTGCCCAGTGATCGGGAAGTCTTGCACCCGTTTGTTCGAAGACATGCCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR CAA 90 bp AGCGGCTCGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACACGTTAGCAAAACCTCCATCTaGCTGCTTGGTGTCCGCATC +
Preference number: 5 (lower is better)
Translates to: SGSADQGVGSVGQGVEHVSKTSI*LLGVRI
Trigger: GATGCGGACACCAAGCAGCAAGATGGAGGTTTTGCT...AACGTGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCGAGCCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CAA 90 bp TGTGAGCGGCTCGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACAATTAAAGTGCAGTCCTaGGCTTCAACCAGAGGGCCC +
Preference number: 5 (lower is better)
Translates to: CERLGRSGCWQCWAGRGTIKVQS*ASTRGP
Trigger: GGGCCCTCTGGTTGAAGCCAAGGACTGCACTTTAAT...TGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCGAGCCGCTCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CAA 90 bp CGGCTCGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACACGTTGTAGGGCGTGGAACACGTaGTGTCGGATTAAAGTGCAG +
Preference number: 5 (lower is better)
Translates to: RLGRSGCWQCWAGRGTRCRAWNT*CRIKVQ
Trigger: CTGCACTTTAATCCGACACAACGTGTTCCACGCCCT...ACAACGTGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCGAGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CAA 90 bp GTTGAGGTAATACCGGAACCGGGGCCGTGTGAGGACCGATCGGATGATGATGTTAGGGTGTTGGCAGTGTaGGGCAGGGCGTGGAACACG +
Preference number: 5 (lower is better)
Translates to: VEVIPEPGPCEDRSDDDVRVLAV*GRAWNT
Trigger: CGTGTTCCACGCCCTGCCCAACACTGCCAACACCCT...AACATCATCATCCGATCGGTCCTCACACGGCCCCGGTTCCGGTATTACCTCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CAA 90 bp GCGGCTCGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACACGTTGCATGTCCATATGATTTaGTGTGGCCACATTCTCACC +
Preference number: 5 (lower is better)
Translates to: AARPIRVLAVLGRAWNTLHVHMI*CGHILT
Trigger: GGTGAGAATGTGGCCACACAAAATCATATGGACATG...CAACGTGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCGAGCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CAA 90 bp AGCGGCTCGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACACGTTTGCCGCTTGGCAAACTaGTGTTACTTTCTGTGTGTC +
Preference number: 5 (lower is better)
Translates to: SGSADQGVGSVGQGVEHVCRLAN*CYFLCV
Trigger: GACACACAGAAAGTAACACAAGTTTGCCAAGCGGCA...AACGTGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCGAGCCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CAA 90 bp AAGCGTGGAGGAGCAACAGGCACAGGTCTCGGTGCCACTTGTGTGCGTGCTGCAAGCAAAACCTCCATCTaGCTGCTTGGTGTCCGCATC +
Preference number: 5 (lower is better)
Translates to: KRGGATGTGLGATCVRAASKTSI*LLGVRI
Trigger: GATGCGGACACCAAGCAGCAAGATGGAGGTTTTGCT...TGCAGCACGCACACAAGTGGCACCGAGACCTGTGCCTGTTGCTCCTCCACGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR CAA 90 bp TGTGAGCGGCTCGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACAACTGTTGGAAAGAGCTaGCTGACCCACATTCAAGTC +
Preference number: 5 (lower is better)
Translates to: CERLGRSGCWQCWAGRGTTVGKS*LTHIQV
Trigger: GACTTGAATGTGGGTCAGCAAGCTCTTTCCAACAGT...TGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCGAGCCGCTCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CAA 90 bp TGTGAGCGGCTCGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACAGATCGGATGATGATGTaGCCAAGAGAATGGCCAATG +
Preference number: 5 (lower is better)
Translates to: CERLGRSGCWQCWAGRGTDRMMM*PREWPM
Trigger: CATTGGCCATTCTCTTGGCAACATCATCATCCGATC...TGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCGAGCCGCTCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CAA 90 bp AGCGGCTCGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACACGTTGATCGGATGATGATGTaGCCAAGAGAATGGCCAATG +
Preference number: 5 (lower is better)
Translates to: SGSADQGVGSVGQGVEHVDRMMM*PREWPM
Trigger: CATTGGCCATTCTCTTGGCAACATCATCATCCGATC...AACGTGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCGAGCCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CAA 90 bp TTGTGTCGGATTAAAGTGCAGTCCTTGGCTTCAACCAGAGGGCCCAGGAGGTTGAGGTCTCGGTGCCACTaGTGTGCGTGCTGCATGCAG +
Preference number: 5 (lower is better)
Translates to: LCRIKVQSLASTRGPRRLRSRCH*CACCMQ
Trigger: CTGCATGCAGCACGCACACAAGTGGCACCGAGACCT...CAACCTCCTGGGCCCTCTGGTTGAAGCCAAGGACTGCACTTTAATCCGACACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CAA 90 bp TGTGAGCGGCTCGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACACATGTCCATATGATTTaGTGTGGCCACATTCTCACC +
Preference number: 5 (lower is better)
Translates to: CERLGRSGCWQCWAGRGTHVHMI*CGHILT
Trigger: GGTGAGAATGTGGCCACACAAAATCATATGGACATG...TGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCGAGCCGCTCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CAA 90 bp GTGAGCGGCTCGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACACCTGGAGGGGTTCTTATaGCTAGATTTTACGTCAATG +
Preference number: 5 (lower is better)
Translates to: VSGSADQGVGSVGQGVEHLEGFL*LDFTSM
Trigger: CATTGACGTAAAATCTAGCAATAAGAACCCCTCCAG...GTGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCGAGCCGCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CAA 90 bp CGGCTCGGCCGATCAGGGTGTTGGCAGTGTTGGGCAGGGCGTGGAACACGTTGTCCTGTGTGTCTGTCTTaGAGGGCAGTTTTACACATT +
Preference number: 5 (lower is better)
Translates to: RLGRSGCWQCWAGRGTRCPVCLS*RAVLHI
Trigger: AATGTGTAAAACTGCCCTCAAAGACAGACACACAGG...ACAACGTGTTCCACGCCCTGCCCAACACTGCCAACACCCTGATCGGCCGAGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CAA 90 bp AGGACCGATCGGATGATGATGTTGCCAAGAGAATGGCCAATGAAGCTAATTCGGCGGCCGATCAGGGTGTaGGCAGTGTTGGGCAGGGCG +
Preference number: 5 (lower is better)
Translates to: RTDRMMMLPREWPMKLIRRPIRV*AVLGRA
Trigger: CGCCCTGCCCAACACTGCCAACACCCTGATCGGCCG...CCGAATTAGCTTCATTGGCCATTCTCTTGGCAACATCATCATCCGATCGGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS TCA 90 bp CTCTGTCTGCCCAGCGATGGAGGCACTCAGTCTGTGGGGGATCCTTaGAGACACCTTCAAGGTCACTCGGATCTGGTAATACCCTCTCTG +
Preference number: 5 (lower is better)
Translates to: LCLPSDGGTQSVGDP*RHLQGHSDLVIPSL
Trigger: CAGAGAGGGTATTACCAGATCCGAGTGACCTTGAAGGTGTCTTCAAGGATCCCCCACAGACTGAGTGCCTCCATCGCTGGGCAGACAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000160713.8
ENST00000276737.10
ENST00000395297.6
ENST00000520380.1
CDS-3UTR CAA 90 bp CTGCTTCCCTTTCCCTTTGGGGATGTCTATGTATCCGGGGCCCTGCTGGTTGTCCCACCTACTACCACTTaGCTTAGCCCAGTCCTGTCT +
Preference number: 5 (lower is better)
Translates to: LLPFPFGDVYVSGALLVVPPTTT*LSPVLS
Trigger: AGACAGGACTGGGCTAAGCAAAGTGGTAGTAGGTGG...GACAACCAGCAGGGCCCCGGATACATAGACATCCCCAAAGGGAAAGGGAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR CAA 90 bp TGCTGTTGTTGTACAGGGTTCCCAGGTGAGGCCCAGAGAGTGACAGGAACGTGTTGGCACATAACGGTCTaGGGGAGAAGCAACCAGCAC +
Preference number: 5 (lower is better)
Translates to: CCCCTGFPGEAQRVTGTCWHITV*GRSNQH
Trigger: GTGCTGGTTGCTTCTCCCCAAGACCGTTATGTGCCA...ACACGTTCCTGTCACTCTCTGGGCCTCACCTGGGAACCCTGTACAACAACAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CAA 90 bp ATTGAGAACCCTGGTCCTAGATGCGTTTCCACACTTCAGAAGGGATTTTTGCAGCGGCCGATCAGGGTGTaGGCAGTGTTGGGCAGGGCG +
Preference number: 5 (lower is better)
Translates to: IENPGPRCVSTLQKGFLQRPIRV*AVLGRA
Trigger: CGCCCTGCCCAACACTGCCAACACCCTGATCGGCCG...CTGCAAAAATCCCTTCTGAAGTGTGGAAACGCATCTAGGACCAGGGTTCTCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CAA 90 bp AAGCGTGGAGGAGCAACAGGCACAGGTCTCGGTGCCACTTGTGTGCGTGCTGCACGTCCCCCAATGCTGTaGAAGCTTCATTCTGAAATG +
Preference number: 5 (lower is better)
Translates to: KRGGATGTGLGATCVRAARPPML*KLHSEM
Trigger: CATTTCAGAATGAAGCTTCAACAGCATTGGGGGACG...TGCAGCACGCACACAAGTGGCACCGAGACCTGTGCCTGTTGCTCCTCCACGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS GCA 90 bp GCAGTCATGGTTCCTGGGATGCCAACACTAATCCTGGCTTACCTGTaGAAGAATGGACCCACTGGAGAACTGGAGTGCAGGTGCGAGGAT +
Preference number: 5 (lower is better)
Translates to: AVMVPGMPTLILAYL*KNGPTGELECRCED
Trigger: ATCCTCGCACCTGCACTCCAGTTCTCCAGTGGGTCCATTCTTGCACAGGTAAGCCAGGATTAGTGTTGGCATCCCAGGAACCATGACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520283.1
CDS-3UTR CAA 90 bp CGGATTAAAGTGCAGTCCTTGGCTTCAACCAGAGGGCCCAGGAGGTTGTTGATCTCTGAGGAAGTCGGCTaGCAGTACCCAGCTCCAAAG +
Preference number: 5 (lower is better)
Translates to: RIKVQSLASTRGPRRLLISEEVG*QYPAPK
Trigger: CTTTGGAGCTGGGTACTGCAAGCCGACTTCCTCAGA...GATCAACAACCTCCTGGGCCCTCTGGTTGAAGCCAAGGACTGCACTTTAATCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CAA 90 bp CGTGTGAGGACCGATCGGATGATGATGTTGCCAAGAGAATGGCCAATGAAGCTAAGGTCTCGGTGCCACTaGTGTGCGTGCTGCATGCAG +
Preference number: 5 (lower is better)
Translates to: RVRTDRMMMLPREWPMKLRSRCH*CACCMQ
Trigger: CTGCATGCAGCACGCACACAAGTGGCACCGAGACCT...TAGCTTCATTGGCCATTCTCTTGGCAACATCATCATCCGATCGGTCCTCACACG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CAA 90 bp ATACCGGAACCGGGGCCGTGTGAGGACCGATCGGATGATGATGTTGCCAAGAGACCCAGCATCAGATGTTaGGCCAGTCCAACATTCATC +
Preference number: 5 (lower is better)
Translates to: IPEPGPCEDRSDDDVAKRPSIRC*ASPTFI
Trigger: GATGAATGTTGGACTGGCCAAACATCTGATGCTGGG...TCTCTTGGCAACATCATCATCCGATCGGTCCTCACACGGCCCCGGTTCCGGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CAA 90 bp AAAGTGCAGTCCTTGGCTTCAACCAGAGGGCCCAGGAGGTTGTTGATCATTTCTACCAGGCGACGGAGCTaGGCTCACTCTCAATGCCTG +
Preference number: 5 (lower is better)
Translates to: KVQSLASTRGPRRLLIISTRRRS*AHSQCL
Trigger: CAGGCATTGAGAGTGAGCCAAGCTCCGTCGCCTGGT...AGAAATGATCAACAACCTCCTGGGCCCTCTGGTTGAAGCCAAGGACTGCACTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CAA 90 bp TCCTCATCCAACGTGCTGGAATGGGTAGAAACAACTCCAAAGGATCCCAAAGGCACCAGGCGACGGAGCTaGGCTCACTCTCAATGCCTG +
Preference number: 5 (lower is better)
Translates to: SSSNVLEWVETTPKDPKGTRRRS*AHSQCL
Trigger: CAGGCATTGAGAGTGAGCCAAGCTCCGTCGCCTGGT...GCCTTTGGGATCCTTTGGAGTTGTTTCTACCCATTCCAGCACGTTGGATGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR CAA 90 bp GTTGAGGTAATACCGGAACCGGGGCCGTGTGAGGACCGATCGGATGATGATGTTTTCAGGCACCTGATGTaGAGAGAGACCCTCAACCTC +
Preference number: 5 (lower is better)
Translates to: VEVIPEPGPCEDRSDDDVFRHLM*RETLNL
Trigger: GAGGTTGAGGGTCTCTCTCAACATCAGGTGCCTGAA...AACATCATCATCCGATCGGTCCTCACACGGCCCCGGTTCCGGTATTACCTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CAA 90 bp CGTGTGAGGACCGATCGGATGATGATGTTGCCAAGAGAATGGCCAATGAAGCTACTGGCAGGGGTCTCCTaGGGCACAGATGAGAAAGGG +
Preference number: 5 (lower is better)
Translates to: RVRTDRMMMLPREWPMKLLAGVS*GTDEKG
Trigger: CCCTTTCTCATCTGTGCCCAAGGAGACCCCTGCCAG...TAGCTTCATTGGCCATTCTCTTGGCAACATCATCATCCGATCGGTCCTCACACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CAA 90 bp CACTCTGCAGGCAGCGGGGGCATGCTAGTGAGGTACTCCGAGTTCCGGATATCCCAGGACTGCAAGTTTTaGGTGCTCCATGTAAAAGAA +
Preference number: 5 (lower is better)
Translates to: HSAGSGGMLVRYSEFRISQDCKF*VLHVKE
Trigger: TTCTTTTACATGGAGCACCAAAAACTTGCAGTCCTG...GGATATCCGGAACTCGGAGTACCTCACTAGCATGCCCCCGCTGCCTGCAGAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR CAA 90 bp TGGCTGAATGAAATGGCACATAACGGTCTTGGGGAGAAGCAACCAGCACGACGTCCTCCATCTTGCTGCTaGGTGTCCGCATCTTCAGCA +
Preference number: 5 (lower is better)
Translates to: WLNEMAHNGLGEKQPARRPPSCC*VSASSA
Trigger: TGCTGAAGATGCGGACACCAAGCAGCAAGATGGAGG...ACGTCGTGCTGGTTGCTTCTCCCCAAGACCGTTATGTGCCATTTCATTCAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CAA 90 bp CGGATTAAAGTGCAGTCCTTGGCTTCAACCAGAGGGCCCAGGAGGTTGTTGATCGGAAACAGGGTCTGTTaGGAAGAGAATCCAGCCCTG +
Preference number: 5 (lower is better)
Translates to: RIKVQSLASTRGPRRLLIGNRVC*EENPAL
Trigger: CAGGGCTGGATTCTCTTCCAAACAGACCCTGTTTCC...GATCAACAACCTCCTGGGCCCTCTGGTTGAAGCCAAGGACTGCACTTTAATCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS TCA 90 bp GGGCTCTTCCCCCTTCACTCGATACCTCTCCTTCCTGCCGCCTTGTaGAGAAGGTGCCTTGTTTCTCCTTCCCCTTATGTCATGATTGTA +
Preference number: 5 (lower is better)
Translates to: GLFPLHSIPLLPAAL*RRCLVSPSPYVMIV
Trigger: TACAATCATGACATAAGGGGAAGGAGAAACAAGGCACCTTCTTCACAAGGCGGCAGGAAGGAGAGGTATCGAGTGAAGGGGGAAGAGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520283.1
CDS-3UTR CAA 90 bp TCCTCATCCAACGTGCTGGAATGGGTAGAAACAACTCCAAAGGATCCCAAAGGCAGCCAGGCCAGATCCTaGCTTATCTGCTCAGCGATC +
Preference number: 5 (lower is better)
Translates to: SSSNVLEWVETTPKDPKGSQARS*LICSAI
Trigger: GATCGCTGAGCAGATAAGCAAGGATCTGGCCTGGCT...GCCTTTGGGATCCTTTGGAGTTGTTTCTACCCATTCCAGCACGTTGGATGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR CAA 90 bp ACACTCCTGCAAAGCTGCCCATCTGGACTCATTCCCATGGTCTGCTTTTATTTTACCAGGCGACGGAGCTaGGCTCACTCTCAATGCCTG +
Preference number: 5 (lower is better)
Translates to: TLLQSCPSGLIPMVCFYFTRRRS*AHSQCL
Trigger: CAGGCATTGAGAGTGAGCCAAGCTCCGTCGCCTGGT...AAAATAAAAGCAGACCATGGGAATGAGTCCAGATGGGCAGCTTTGCAGGAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CAA 90 bp TTGTGTCGGATTAAAGTGCAGTCCTTGGCTTCAACCAGAGGGCCCAGGAGGTTGAGGAAGACAGTGTCCTaGAGCATCAAACTGCTTCCC +
Preference number: 5 (lower is better)
Translates to: LCRIKVQSLASTRGPRRLRKTVS*SIKLLP
Trigger: GGGAAGCAGTTTGATGCTCAAGGACACTGTCTTCCT...CAACCTCCTGGGCCCTCTGGTTGAAGCCAAGGACTGCACTTTAATCCGACACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CAA 90 bp CGTGTGAGGACCGATCGGATGATGATGTTGCCAAGAGAATGGCCAATGAAGCTACTAACCAGGGTGCTGTaGTTGTACAGGGTTCCCAGG +
Preference number: 5 (lower is better)
Translates to: RVRTDRMMMLPREWPMKLLTRVL*LYRVPR
Trigger: CCTGGGAACCCTGTACAACAACAGCACCCTGGTTAG...TAGCTTCATTGGCCATTCTCTTGGCAACATCATCATCCGATCGGTCCTCACACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CAA 90 bp ACATTTCAATCCTGGCTGAATGAAATGGCACATAACGGTCTTGGGGAGAAGCAAAGGGTGTTGGCAGTGTaGGGCAGGGCGTGGAACACG +
Preference number: 5 (lower is better)
Translates to: TFQSWLNEMAHNGLGEKQRVLAV*GRAWNT
Trigger: CGTGTTCCACGCCCTGCCCAACACTGCCAACACCCT...TTGCTTCTCCCCAAGACCGTTATGTGCCATTTCATTCAGCCAGGATTGAAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CAA 90 bp AAGCGTGGAGGAGCAACAGGCACAGGTCTCGGTGCCACTTGTGTGCGTGCTGCATTCCTAGAAAACATCTaGAATGACACTCCAGGTAAC +
Preference number: 5 (lower is better)
Translates to: KRGGATGTGLGATCVRAAFLENI*NDTPGN
Trigger: GTTACCTGGAGTGTCATTCAAGATGTTTTCTAGGAA...TGCAGCACGCACACAAGTGGCACCGAGACCTGTGCCTGTTGCTCCTCCACGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR CAA 90 bp CGTGTGAGGACCGATCGGATGATGATGTTGCCAAGAGAATGGCCAATGAAGCTAGTCTGTGGGGGATCCTaGAAGACACCTTCAAGGTCA +
Preference number: 5 (lower is better)
Translates to: RVRTDRMMMLPREWPMKLVCGGS*KTPSRS
Trigger: TGACCTTGAAGGTGTCTTCAAGGATCCCCCACAGAC...TAGCTTCATTGGCCATTCTCTTGGCAACATCATCATCCGATCGGTCCTCACACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CAA 90 bp ACCTTTACCAAGCCAGGAGCCTCTTCCTGGACGAGTAAAACTGATCAATGGCTGAATGATAGACTGTTCTaGTCCGGTGTCTGGGCCACC +
Preference number: 5 (lower is better)
Translates to: TFTKPGASSWTSKTDQWLNDRLF*SGVWAT
Trigger: GGTGGCCCAGACACCGGACAAGAACAGTCTATCATT...CAGCCATTGATCAGTTTTACTCGTCCAGGAAGAGGCTCCTGGCTTGGTAAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR CAA 90 bp TCAGCATTATCCCTGAAGGTCAGCTGCAGTAGAGACCCGGATTTCTTCAGTTTCAGCCAGGCCAGATCCTaGCTTATCTGCTCAGCGATC +
Preference number: 5 (lower is better)
Translates to: SALSLKVSCSRDPDFFSFSQARS*LICSAI
Trigger: GATCGCTGAGCAGATAAGCAAGGATCTGGCCTGGCT...GAAACTGAAGAAATCCGGGTCTCTACTGCAGCTGACCTTCAGGGATAATGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CAA 90 bp TGGCTGAATGAAATGGCACATAACGGTCTTGGGGAGAAGCAACCAGCACGACGTGAGATAAGTGGTCACTaGGGAGTGCAGAGTGACTGT +
Preference number: 5 (lower is better)
Translates to: WLNEMAHNGLGEKQPARREISGH*GVQSDC
Trigger: ACAGTCACTCTGCACTCCCAAGTGACCACTTATCTC...ACGTCGTGCTGGTTGCTTCTCCCCAAGACCGTTATGTGCCATTTCATTCAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CAA 90 bp AAAGTGCAGTCCTTGGCTTCAACCAGAGGGCCCAGGAGGTTGTTGATCATTTCTGGGGAACCTTGGCTCTaGCTGTGCATATCTGAAGGT +
Preference number: 5 (lower is better)
Translates to: KVQSLASTRGPRRLLIISGEPWL*LCISEG
Trigger: ACCTTCAGATATGCACAGCAAGAGCCAAGGTTCCCC...AGAAATGATCAACAACCTCCTGGGCCCTCTGGTTGAAGCCAAGGACTGCACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CAA 90 bp GCATTATCCCTGAAGGTCAGCTGCAGTAGAGACCCGGATTTCTTCAGTTTCTGCGGGGAACCTTGGCTCTaGCTGTGCATATCTGAAGGT +
Preference number: 5 (lower is better)
Translates to: ALSLKVSCSRDPDFFSFCGEPWL*LCISEG
Trigger: ACCTTCAGATATGCACAGCAAGAGCCAAGGTTCCCC...GCAGAAACTGAAGAAATCCGGGTCTCTACTGCAGCTGACCTTCAGGGATAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CAA 90 bp CCGTGTGAGGACCGATCGGATGATGATGTTGCCAAGAGAATGGCCAATGAAGCTTGCTTCCCTTTCCCTTaGGGGATGTCTATGTATCCG +
Preference number: 5 (lower is better)
Translates to: PCEDRSDDDVAKRMANEACFPFP*GMSMYP
Trigger: CGGATACATAGACATCCCCAAAGGGAAAGGGAAGCA...AGCTTCATTGGCCATTCTCTTGGCAACATCATCATCCGATCGGTCCTCACACGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CAA 90 bp GACCCGGATTTCTTCAGTTTCTGCATGAGCCATAAGCCTGTACTAACCAGGGTGCCTGTTGAGTTCCTGTaGATGGCATCAGCAGCTGAC +
Preference number: 5 (lower is better)
Translates to: DPDFFSFCMSHKPVLTRVPVEFL*MASAAD
Trigger: GTCAGCTGCTGATGCCATCAACAGGAACTCAACAGG...CACCCTGGTTAGTACAGGCTTATGGCTCATGCAGAAACTGAAGAAATCCGGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CAA 90 bp TCAGTGCCCCCTTCTGCTAGGTTAGTCTCACTCAGTGTTCCCTACTACAGACAACCTGTTGAGTTCCTGTaGATGGCATCAGCAGCTGAC +
Preference number: 5 (lower is better)
Translates to: SVPPSARLVSLSVPYYRQPVEFL*MASAAD
Trigger: GTCAGCTGCTGATGCCATCAACAGGAACTCAACAGG...TTGTCTGTAGTAGGGAACACTGAGTGAGACTAACCTAGCAGAAGGGGGCACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CAA 90 bp GCATTATCCCTGAAGGTCAGCTGCAGTAGAGACCCGGATTTCTTCAGTTTCTGCCCTGTTGAGTTCCTGTaGATGGCATCAGCAGCTGAC +
Preference number: 5 (lower is better)
Translates to: ALSLKVSCSRDPDFFSFCPVEFL*MASAAD
Trigger: GTCAGCTGCTGATGCCATCAACAGGAACTCAACAGG...GCAGAAACTGAAGAAATCCGGGTCTCTACTGCAGCTGACCTTCAGGGATAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CAA 90 bp TCGGATGATGATGTTGCCAAGAGAATGGCCAATGAAGCTAATTCGGGATATGGACTGGCAGGGGTCTCCTaGGGCACAGATGAGAAAGGG +
Preference number: 5 (lower is better)
Translates to: SDDDVAKRMANEANSGYGLAGVS*GTDEKG
Trigger: CCCTTTCTCATCTGTGCCCAAGGAGACCCCTGCCAG...TCCATATCCCGAATTAGCTTCATTGGCCATTCTCTTGGCAACATCATCATCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CAA 90 bp CTTCAGCTCTTGGTTTTTCAAAACCTGGGAATGAACGGAATGGGTCACAGTGGGTGGCACATAACGGTCTaGGGGAGAAGCAACCAGCAC +
Preference number: 5 (lower is better)
Translates to: LQLLVFQNLGMNGMGHSGWHITV*GRSNQH
Trigger: GTGCTGGTTGCTTCTCCCCAAGACCGTTATGTGCCA...CCCACTGTGACCCATTCCGTTCATTCCCAGGTTTTGAAAAACCAAGAGCTGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR CAA 90 bp TGTACTAACCAGGGTGCTGTTGTTGTACAGGGTTCCCAGGTGAGGCCCAGAGAGCCTGTGTGTCTGTCTTaGAGGGCAGTTTTACACATT +
Preference number: 5 (lower is better)
Translates to: CTNQGAVVVQGSQVRPREPVCLS*RAVLHI
Trigger: AATGTGTAAAACTGCCCTCAAAGACAGACACACAGG...CTCTCTGGGCCTCACCTGGGAACCCTGTACAACAACAGCACCCTGGTTAGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CAA 90 bp AAAGTGCAGTCCTTGGCTTCAACCAGAGGGCCCAGGAGGTTGTTGATCATTTCTAGGGCGTGGAACACGTaGTGTCGGATTAAAGTGCAG +
Preference number: 5 (lower is better)
Translates to: KVQSLASTRGPRRLLIISRAWNT*CRIKVQ
Trigger: CTGCACTTTAATCCGACACAACGTGTTCCACGCCCT...AGAAATGATCAACAACCTCCTGGGCCCTCTGGTTGAAGCCAAGGACTGCACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CAA 90 bp ACAAAAATTACGCAGAGAATGAAGACATACAAGACCATTATCTTGGCAGGCATTACCTGCGAGCTGGTGTaGGGTCCCCGCGGCGAGGCT +
Preference number: 5 (lower is better)
Translates to: TKITQRMKTYKTIILAGITCELV*GPRGEA
Trigger: AGCCTCGCCGCGGGGACCCAACACCAGCTCGCAGGT...AATGCCTGCCAAGATAATGGTCTTGTATGTCTTCATTCTCTGCGTAATTTTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS TCA 90 bp TCACCTTCTCTAGGGATACCTTCACAAACCATACCCTACACTGGGTaGAGAGCTCCTTCCTTTGGCTCCCAAATCACCACAGATCCCTCT +
Preference number: 5 (lower is better)
Translates to: SPSLGIPSQTIPYTG*RAPSFGSQITTDPS
Trigger: AGAGGGATCTGTGGTGATTTGGGAGCCAAAGGAAGGAGCTCTTCACCCAGTGTAGGGTATGGTTTGTGAAGGTATCCCTAGAGAAGGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520283.1
CDS GCA 90 bp GCTTACCTGTGCAAGAATGGACCCACTGGAGAACTGGAGTGCAGGTaGGAGGATCATAGGGAAGATAGTGTGATGAACAAGGCTAAGAAC +
Preference number: 5 (lower is better)
Translates to: AYLCKNGPTGELECR*EDHREDSVMNKAKN
Trigger: GTTCTTAGCCTTGTTCATCACACTATCTTCCCTATGATCCTCGCACCTGCACTCCAGTTCTCCAGTGGGTCCATTCTTGCACAGGTAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520283.1
CDS CCA 90 bp AGAGTCACCTTCTCTAGGGATACCTTCACAAACCATACCCTACACTaGGTGAAGAGCTCCTTCCTTTGGCTCCCAAATCACCACAGATCC +
Preference number: 5 (lower is better)
Translates to: RVTFSRDTFTNHTLH*VKSSFLWLPNHHRS
Trigger: GGATCTGTGGTGATTTGGGAGCCAAAGGAAGGAGCTCTTCACCCAGTGTAGGGTATGGTTTGTGAAGGTATCCCTAGAGAAGGTGACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520283.1
CDS-3UTR CAA 90 bp ATTGAGAACCCTGGTCCTAGATGCGTTTCCACACTTCAGAAGGGATTTTTGCAGAGCCAGGCCAGATCCTaGCTTATCTGCTCAGCGATC +
Preference number: 5 (lower is better)
Translates to: IENPGPRCVSTLQKGFLQSQARS*LICSAI
Trigger: GATCGCTGAGCAGATAAGCAAGGATCTGGCCTGGCT...CTGCAAAAATCCCTTCTGAAGTGTGGAAACGCATCTAGGACCAGGGTTCTCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CAA 90 bp AAAGTGCAGTCCTTGGCTTCAACCAGAGGGCCCAGGAGGTTGTTGATCATTTCTCCCAGCATCAGATGTTaGGCCAGTCCAACATTCATC +
Preference number: 5 (lower is better)
Translates to: KVQSLASTRGPRRLLIISPSIRC*ASPTFI
Trigger: GATGAATGTTGGACTGGCCAAACATCTGATGCTGGG...AGAAATGATCAACAACCTCCTGGGCCCTCTGGTTGAAGCCAAGGACTGCACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CAA 90 bp TGGCTGAATGAAATGGCACATAACGGTCTTGGGGAGAAGCAACCAGCACGACGTATGGATGAAGATCTCTaGATGACCCCGGATAGCACT +
Preference number: 5 (lower is better)
Translates to: WLNEMAHNGLGEKQPARRMDEDL*MTPDST
Trigger: AGTGCTATCCGGGGTCATCAAGAGATCTTCATCCAT...ACGTCGTGCTGGTTGCTTCTCCCCAAGACCGTTATGTGCCATTTCATTCAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CAA 90 bp CTTCATTCCGGTATAAGATCTGAAAGACCCGGCTGTGCACGGTGCTGTCATGGAAAGCCTGGATGCCGCTaGGCAAACTTGTGTTACTTT +
Preference number: 5 (lower is better)
Translates to: LHSGIRSERPGCARCCHGKPGCR*ANLCYF
Trigger: AAAGTAACACAAGTTTGCCAAGCGGCATCCAGGCTT...TCCATGACAGCACCGTGCACAGCCGGGTCTTTCAGATCTTATACCGGAATGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR CAA 90 bp AAAGTGCAGTCCTTGGCTTCAACCAGAGGGCCCAGGAGGTTGTTGATCATTTCTAGAGTCACCACAAAGTaGAGAGCAAGATCCTGGGGA +
Preference number: 5 (lower is better)
Translates to: KVQSLASTRGPRRLLIISRVTTK*RARSWG
Trigger: TCCCCAGGATCTTGCTCTCAACTTTGTGGTGACTCT...AGAAATGATCAACAACCTCCTGGGCCCTCTGGTTGAAGCCAAGGACTGCACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CAA 90 bp AAACATCCTCTCACTGACTTCCTCATCCAACGTGCTGGAATGGGTAGAAACAACCCGGGGCCCTGCTGGTaGTCAGCATCTAAAACTATC +
Preference number: 5 (lower is better)
Translates to: KHPLTDFLIQRAGMGRNNPGPCW*SASKTI
Trigger: GATAGTTTTAGATGCTGACAACCAGCAGGGCCCCGG...GTTGTTTCTACCCATTCCAGCACGTTGGATGAGGAAGTCAGTGAGAGGATGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR CAA 90 bp GCATTATCCCTGAAGGTCAGCTGCAGTAGAGACCCGGATTTCTTCAGTTTCTGCAGGAAGACAGTGTCCTaGAGCATCAAACTGCTTCCC +
Preference number: 5 (lower is better)
Translates to: ALSLKVSCSRDPDFFSFCRKTVS*SIKLLP
Trigger: GGGAAGCAGTTTGATGCTCAAGGACACTGTCTTCCT...GCAGAAACTGAAGAAATCCGGGTCTCTACTGCAGCTGACCTTCAGGGATAATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CAA 90 bp TTATCCCTGAAGGTCAGCTGCAGTAGAGACCCGGATTTCTTCAGTTTCTGCATGTTCAGGCACCTGATGTaGAGAGAGACCCTCAACCTC +
Preference number: 5 (lower is better)
Translates to: LSLKVSCSRDPDFFSFCMFRHLM*RETLNL
Trigger: GAGGTTGAGGGTCTCTCTCAACATCAGGTGCCTGAA...CATGCAGAAACTGAAGAAATCCGGGTCTCTACTGCAGCTGACCTTCAGGGATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CAA 90 bp CGTGTGAGGACCGATCGGATGATGATGTTGCCAAGAGAATGGCCAATGAAGCTAGCCTGCCTTCAGCTCTaGGTTTTTCAAAACCTGGGA +
Preference number: 5 (lower is better)
Translates to: RVRTDRMMMLPREWPMKLACLQL*VFQNLG
Trigger: TCCCAGGTTTTGAAAAACCAAGAGCTGAAGGCAGGC...TAGCTTCATTGGCCATTCTCTTGGCAACATCATCATCCGATCGGTCCTCACACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS TCA 90 bp GAAGGTGCCGGGTGGCTATTGAAGAGCCATGTCTCAAGTACTCCATaGGAGTTCCTGGAACTCTCCTTCCTTAGCAAAAATAATGTGGGG +
Preference number: 5 (lower is better)
Translates to: EGAGWLLKSHVSSTP*EFLELSFLSKNNVG
Trigger: CCCCACATTATTTTTGCTAAGGAAGGAGAGTTCCAGGAACTCTCATGGAGTACTTGAGACATGGCTCTTCAATAGCCACCCGGCACCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520283.1
CDS CCA 90 bp CCAAAGACAGGCCAGGATGATCAGACATCACCTGAGGATGATGCCTaGCACAGTAGTCCCAACCAGATACTGGACCAGCCATTTAATAAT +
Preference number: 5 (lower is better)
Translates to: PKTGQDDQTSPEDDA*HSSPNQILDQPFNN
Trigger: ATTATTAAATGGCTGGTCCAGTATCTGGTTGGGACTACTGTGCCAGGCATCATCCTCAGGTGATGTCTGATCATCCTGGCCTGTCTTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520283.1
CDS-3UTR CAA 90 bp GTCTGTAAAAGCAGGTCTCAGCTAAAGCTCTCCACCGATCGTAAGCATTACCAAAATGATAGACTGTTCTaGTCCGGTGTCTGGGCCACC +
Preference number: 5 (lower is better)
Translates to: VCKSRSQLKLSTDRKHYQNDRLF*SGVWAT
Trigger: GGTGGCCCAGACACCGGACAAGAACAGTCTATCATT...TTGGTAATGCTTACGATCGGTGGAGAGCTTTAGCTGAGACCTGCTTTTACAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395297.6
ENST00000482951.6
CDS-3UTR CAA 90 bp CTGTCTTACTTATCCCTACTGTCCAGGTTCATTCATCTCTTCCATACAACGAAAAGGTCTCGGTGCCACTaGTGTGCGTGCTGCATGCAG +
Preference number: 5 (lower is better)
Translates to: LSYLSLLSRFIHLFHTTKRSRCH*CACCMQ
Trigger: CTGCATGCAGCACGCACACAAGTGGCACCGAGACCT...TTTCGTTGTATGGAAGAGATGAATGAACCTGGACAGTAGGGATAAGTAAGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CAA 90 bp GTGAGGACCGATCGGATGATGATGTTGCCAAGAGAATGGCCAATGAAGCTAATTCCACCTACTACCACTTaGCTTAGCCCAGTCCTGTCT +
Preference number: 5 (lower is better)
Translates to: VRTDRMMMLPREWPMKLIPPTTT*LSPVLS
Trigger: AGACAGGACTGGGCTAAGCAAAGTGGTAGTAGGTGG...AATTAGCTTCATTGGCCATTCTCTTGGCAACATCATCATCCGATCGGTCCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CAA 90 bp TGTACTAACCAGGGTGCTGTTGTTGTACAGGGTTCCCAGGTGAGGCCCAGAGAGTCATGGAGAGTTGTTTaGTCTGAAGAGATGGCATTT +
Preference number: 5 (lower is better)
Translates to: CTNQGAVVVQGSQVRPRESWRVV*SEEMAF
Trigger: AAATGCCATCTCTTCAGACAAAACAACTCTCCATGA...CTCTCTGGGCCTCACCTGGGAACCCTGTACAACAACAGCACCCTGGTTAGTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CAA 90 bp GCATTATCCCTGAAGGTCAGCTGCAGTAGAGACCCGGATTTCTTCAGTTTCTGCTGCCGCTTGGCAAACTaGTGTTACTTTCTGTGTGTC +
Preference number: 5 (lower is better)
Translates to: ALSLKVSCSRDPDFFSFCCRLAN*CYFLCV
Trigger: GACACACAGAAAGTAACACAAGTTTGCCAAGCGGCA...GCAGAAACTGAAGAAATCCGGGTCTCTACTGCAGCTGACCTTCAGGGATAATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CAA 90 bp GCATTATCCCTGAAGGTCAGCTGCAGTAGAGACCCGGATTTCTTCAGTTTCTGCGGAGCAGATACAGACTaGGTTAACTTAGTGAGTGCC +
Preference number: 5 (lower is better)
Translates to: ALSLKVSCSRDPDFFSFCGADTD*VNLVSA
Trigger: GGCACTCACTAAGTTAACCAAGTCTGTATCTGCTCC...GCAGAAACTGAAGAAATCCGGGTCTCTACTGCAGCTGACCTTCAGGGATAATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CAA 90 bp CTTCCCCCAGCATTAACTACCTGTGGTTTCCTTTTACCTAATTCGGGATATGGACCTCCATCTTGCTGCTaGGTGTCCGCATCTTCAGCA +
Preference number: 5 (lower is better)
Translates to: LPPALTTCGFLLPNSGYGPPSCC*VSASSA
Trigger: TGCTGAAGATGCGGACACCAAGCAGCAAGATGGAGG...TCCATATCCCGAATTAGGTAAAAGGAAACCACAGGTAGTTAATGCTGGGGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR CAA 90 bp CCCCCAGCATTAACTACCTGTGGTTTCCTTTTACCTAATTCGGGATATGGAGAGGGGGAACCTTGGCTCTaGCTGTGCATATCTGAAGGT +
Preference number: 5 (lower is better)
Translates to: PPALTTCGFLLPNSGYGEGEPWL*LCISEG
Trigger: ACCTTCAGATATGCACAGCAAGAGCCAAGGTTCCCC...CTCTCCATATCCCGAATTAGGTAAAAGGAAACCACAGGTAGTTAATGCTGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR CAA 90 bp TCAGCATTATCCCTGAAGGTCAGCTGCAGTAGAGACCCGGATTTCTTCAGTTTCAGAGTCACCACAAAGTaGAGAGCAAGATCCTGGGGA +
Preference number: 5 (lower is better)
Translates to: SALSLKVSCSRDPDFFSFRVTTK*RARSWG
Trigger: TCCCCAGGATCTTGCTCTCAACTTTGTGGTGACTCT...GAAACTGAAGAAATCCGGGTCTCTACTGCAGCTGACCTTCAGGGATAATGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CAA 90 bp CCCCCAGCATTAACTACCTGTGGTTTCCTTTTACCTAATTCGGGATATGGAGAGTTCAGGCACCTGATGTaGAGAGAGACCCTCAACCTC +
Preference number: 5 (lower is better)
Translates to: PPALTTCGFLLPNSGYGEFRHLM*RETLNL
Trigger: GAGGTTGAGGGTCTCTCTCAACATCAGGTGCCTGAA...CTCTCCATATCCCGAATTAGGTAAAAGGAAACCACAGGTAGTTAATGCTGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR CAA 90 bp ATTGAGAACCCTGGTCCTAGATGCGTTTCCACACTTCAGAAGGGATTTTTGCAGGGAAACAGGGTCTGTTaGGAAGAGAATCCAGCCCTG +
Preference number: 5 (lower is better)
Translates to: IENPGPRCVSTLQKGFLQGNRVC*EENPAL
Trigger: CAGGGCTGGATTCTCTTCCAAACAGACCCTGTTTCC...CTGCAAAAATCCCTTCTGAAGTGTGGAAACGCATCTAGGACCAGGGTTCTCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CAA 90 bp TCAGTGCCCCCTTCTGCTAGGTTAGTCTCACTCAGTGTTCCCTACTACAGACAACGTCCCCCAATGCTGTaGAAGCTTCATTCTGAAATG +
Preference number: 5 (lower is better)
Translates to: SVPPSARLVSLSVPYYRQRPPML*KLHSEM
Trigger: CATTTCAGAATGAAGCTTCAACAGCATTGGGGGACG...TTGTCTGTAGTAGGGAACACTGAGTGAGACTAACCTAGCAGAAGGGGGCACTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CAA 90 bp TCAGTGCCCCCTTCTGCTAGGTTAGTCTCACTCAGTGTTCCCTACTACAGACAAGAGTCTTCAGTCTGGTaGTTCTCCTCCTATCTGATC +
Preference number: 5 (lower is better)
Translates to: SVPPSARLVSLSVPYYRQESSVW*FSSYLI
Trigger: GATCAGATAGGAGGAGAACAACCAGACTGAAGACTC...TTGTCTGTAGTAGGGAACACTGAGTGAGACTAACCTAGCAGAAGGGGGCACTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CAA 90 bp ACATTTCAATCCTGGCTGAATGAAATGGCACATAACGGTCTTGGGGAGAAGCAAAATGATAGACTGTTCTaGTCCGGTGTCTGGGCCACC +
Preference number: 5 (lower is better)
Translates to: TFQSWLNEMAHNGLGEKQNDRLF*SGVWAT
Trigger: GGTGGCCCAGACACCGGACAAGAACAGTCTATCATT...TTGCTTCTCCCCAAGACCGTTATGTGCCATTTCATTCAGCCAGGATTGAAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CAA 90 bp CTCCTCCTATCTGATCTCACTTTTGTCCCTGTCGTCTATTGGTTTTTATCAACGTCTGAGGAAGTCGGCTaGCAGTACCCAGCTCCAAAG +
Preference number: 5 (lower is better)
Translates to: LLLSDLTFVPVVYWFLSTSEEVG*QYPAPK
Trigger: CTTTGGAGCTGGGTACTGCAAGCCGACTTCCTCAGA...CGTTGATAAAAACCAATAGACGACAGGGACAAAAGTGAGATCAGATAGGAGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CAA 90 bp ACACTCCTGCAAAGCTGCCCATCTGGACTCATTCCCATGGTCTGCTTTTATTTTGAGATAAGTGGTCACTaGGGAGTGCAGAGTGACTGT +
Preference number: 5 (lower is better)
Translates to: TLLQSCPSGLIPMVCFYFEISGH*GVQSDC
Trigger: ACAGTCACTCTGCACTCCCAAGTGACCACTTATCTC...AAAATAAAAGCAGACCATGGGAATGAGTCCAGATGGGCAGCTTTGCAGGAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CAA 90 bp GTCTGTAAAAGCAGGTCTCAGCTAAAGCTCTCCACCGATCGTAAGCATTACCAAGAGATAAGTGGTCACTaGGGAGTGCAGAGTGACTGT +
Preference number: 5 (lower is better)
Translates to: VCKSRSQLKLSTDRKHYQEISGH*GVQSDC
Trigger: ACAGTCACTCTGCACTCCCAAGTGACCACTTATCTC...TTGGTAATGCTTACGATCGGTGGAGAGCTTTAGCTGAGACCTGCTTTTACAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395297.6
ENST00000482951.6
CDS-3UTR CAA 90 bp TGGAGGCACTCAGTCTGTGGGGGATCCTTGAAGACACCTTCAAGGTCACTCGGATTCATCAGAATCCATTaGGGATGGTTTTATGGTAGA +
Preference number: 5 (lower is better)
Translates to: WRHSVCGGSLKTPSRSLGFIRIH*GWFYGR
Trigger: TCTACCATAAAACCATCCCAAATGGATTCTGATGAA...TCCGAGTGACCTTGAAGGTGTCTTCAAGGATCCCCCACAGACTGAGTGCCTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR CAA 90 bp TTATCCCTGAAGGTCAGCTGCAGTAGAGACCCGGATTTCTTCAGTTTCTGCATGATGGATGAAGATCTCTaGATGACCCCGGATAGCACT +
Preference number: 5 (lower is better)
Translates to: LSLKVSCSRDPDFFSFCMMDEDL*MTPDST
Trigger: AGTGCTATCCGGGGTCATCAAGAGATCTTCATCCAT...CATGCAGAAACTGAAGAAATCCGGGTCTCTACTGCAGCTGACCTTCAGGGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CAA 90 bp CCCCCTTCTGCTAGGTTAGTCTCACTCAGTGTTCCCTACTACAGACAAAGATGTATGGATGAAGATCTCTaGATGACCCCGGATAGCACT +
Preference number: 5 (lower is better)
Translates to: PPSARLVSLSVPYYRQRCMDEDL*MTPDST
Trigger: AGTGCTATCCGGGGTCATCAAGAGATCTTCATCCAT...ACATCTTTGTCTGTAGTAGGGAACACTGAGTGAGACTAACCTAGCAGAAGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CAA 90 bp CCCCCTTCTGCTAGGTTAGTCTCACTCAGTGTTCCCTACTACAGACAAAGATGTGGAGCAGATACAGACTaGGTTAACTTAGTGAGTGCC +
Preference number: 5 (lower is better)
Translates to: PPSARLVSLSVPYYRQRCGADTD*VNLVSA
Trigger: GGCACTCACTAAGTTAACCAAGTCTGTATCTGCTCC...ACATCTTTGTCTGTAGTAGGGAACACTGAGTGAGACTAACCTAGCAGAAGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CAA 90 bp AGTCACTTACCAATAACAGCTTATGTTGAGTCTTCAGTCTGGTTGTTCTCCTCCCCTCCATCTTGCTGCTaGGTGTCCGCATCTTCAGCA +
Preference number: 5 (lower is better)
Translates to: SHLPITAYVESSVWLFSSPPSCC*VSASSA
Trigger: TGCTGAAGATGCGGACACCAAGCAGCAAGATGGAGG...GGAGGAGAACAACCAGACTGAAGACTCAACATAAGCTGTTATTGGTAAGTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CAA 90 bp CTCCTCCTATCTGATCTCACTTTTGTCCCTGTCGTCTATTGGTTTTTATCAACGCCGGGGCCCTGCTGGTaGTCAGCATCTAAAACTATC +
Preference number: 5 (lower is better)
Translates to: LLLSDLTFVPVVYWFLSTPGPCW*SASKTI
Trigger: GATAGTTTTAGATGCTGACAACCAGCAGGGCCCCGG...CGTTGATAAAAACCAATAGACGACAGGGACAAAAGTGAGATCAGATAGGAGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CAA 90 bp ACACTCCTGCAAAGCTGCCCATCTGGACTCATTCCCATGGTCTGCTTTTATTTTTGCTTCCCTTTCCCTTaGGGGATGTCTATGTATCCG +
Preference number: 5 (lower is better)
Translates to: TLLQSCPSGLIPMVCFYFCFPFP*GMSMYP
Trigger: CGGATACATAGACATCCCCAAAGGGAAAGGGAAGCA...AAAATAAAAGCAGACCATGGGAATGAGTCCAGATGGGCAGCTTTGCAGGAGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CAA 90 bp ATTGAGAACCCTGGTCCTAGATGCGTTTCCACACTTCAGAAGGGATTTTTGCAGAGGAAGACAGTGTCCTaGAGCATCAAACTGCTTCCC +
Preference number: 5 (lower is better)
Translates to: IENPGPRCVSTLQKGFLQRKTVS*SIKLLP
Trigger: GGGAAGCAGTTTGATGCTCAAGGACACTGTCTTCCT...CTGCAAAAATCCCTTCTGAAGTGTGGAAACGCATCTAGGACCAGGGTTCTCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CAA 90 bp GATGATGTTGCCAAGAGAATGGCCAATGAAGCTAATTCGGGATATGGAGAGGTTGGAAACAGGGTCTGTTaGGAAGAGAATCCAGCCCTG +
Preference number: 5 (lower is better)
Translates to: DDVAKRMANEANSGYGEVGNRVC*EENPAL
Trigger: CAGGGCTGGATTCTCTTCCAAACAGACCCTGTTTCC...AACCTCTCCATATCCCGAATTAGCTTCATTGGCCATTCTCTTGGCAACATCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CAA 90 bp TCGGATGATGATGTTGCCAAGAGAATGGCCAATGAAGCTAATTCGGGATATGGAATTAAAGTGCAGTCCTaGGCTTCAACCAGAGGGCCC +
Preference number: 5 (lower is better)
Translates to: SDDDVAKRMANEANSGYGIKVQS*ASTRGP
Trigger: GGGCCCTCTGGTTGAAGCCAAGGACTGCACTTTAAT...TCCATATCCCGAATTAGCTTCATTGGCCATTCTCTTGGCAACATCATCATCCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CAA 90 bp AAACTTGTATTTACCAATAGTGTCACCTTTATCCCTCTTTACCTTAAGTCACCCAGGGTGTTGGCAGTGTaGGGCAGGGCGTGGAACACG +
Preference number: 5 (lower is better)
Translates to: KLVFTNSVTFIPLYLKSPRVLAV*GRAWNT
Trigger: CGTGTTCCACGCCCTGCCCAACACTGCCAACACCCT...GGGTGACTTAAGGTAAAGAGGGATAAAGGTGACACTATTGGTAAATACAAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS TCA 90 bp GACCTCCTCCAACGGTGTTACTTCATCTCCTCTCACTGCCATTACTaGACTCCCATTTCAAGTCAGCAGCTTCTCTTAATGACAGGAATG +
Preference number: 5 (lower is better)
Translates to: DLLQRCYFISSHCHY*TPISSQQLLLMTGM
Trigger: CATTCCTGTCATTAAGAGAAGCTGCTGACTTGAAATGGGAGTTCAGTAATGGCAGTGAGAGGAGATGAAGTAACACCGTTGGAGGAGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520283.1
ENST00000520954.1
CDS TCA 90 bp ATAAAGTCCAAATGCTGTGGCTTGTTTTTAAGGCACCCTGTGCTCTaGCCTCCTCCAACGGTGTTACTTCATCTCCTCTCACTGCCATTA +
Preference number: 5 (lower is better)
Translates to: IKSKCCGLFLRHPVL*PPPTVLLHLLSLPL
Trigger: TAATGGCAGTGAGAGGAGATGAAGTAACACCGTTGGAGGAGGTCAGAGCACAGGGTGCCTTAAAAACAAGCCACAGCATTTGGACTTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000520283.1
ENST00000520954.1
CDS GCA 90 bp CGAGAAGGAGCTCCTATAATTTCACACCTCTTATCTAAGAGAAGGTaGCGGGTGGCTATTGAAGAGCCATGTCTCAAGTACTCCATGAGA +
Preference number: 5 (lower is better)
Translates to: REGAPIISHLLSKRR*RVAIEEPCLKYSMR
Trigger: TCTCATGGAGTACTTGAGACATGGCTCTTCAATAGCCACCCGGCACCTTCTCTTAGATAAGAGGTGTGAAATTATAGGAGCTCCTTCTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520283.1
CDS-3UTR CAA 90 bp ATTGAGAACCCTGGTCCTAGATGCGTTTCCACACTTCAGAAGGGATTTTTGCAGTGCCGCTTGGCAAACTaGTGTTACTTTCTGTGTGTC +
Preference number: 5 (lower is better)
Translates to: IENPGPRCVSTLQKGFLQCRLAN*CYFLCV
Trigger: GACACACAGAAAGTAACACAAGTTTGCCAAGCGGCA...CTGCAAAAATCCCTTCTGAAGTGTGGAAACGCATCTAGGACCAGGGTTCTCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CAA 90 bp TGCAGTAGAGACCCGGATTTCTTCAGTTTCTGCATGAGCCATAAGCCTGTACTAGGAGCAGATACAGACTaGGTTAACTTAGTGAGTGCC +
Preference number: 5 (lower is better)
Translates to: CSRDPDFFSFCMSHKPVLGADTD*VNLVSA
Trigger: GGCACTCACTAAGTTAACCAAGTCTGTATCTGCTCC...TAGTACAGGCTTATGGCTCATGCAGAAACTGAAGAAATCCGGGTCTCTACTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CAA 90 bp AGTCACTTACCAATAACAGCTTATGTTGAGTCTTCAGTCTGGTTGTTCTCCTCCAGCAAAACCTCCATCTaGCTGCTTGGTGTCCGCATC +
Preference number: 5 (lower is better)
Translates to: SHLPITAYVESSVWLFSSSKTSI*LLGVRI
Trigger: GATGCGGACACCAAGCAGCAAGATGGAGGTTTTGCT...GGAGGAGAACAACCAGACTGAAGACTCAACATAAGCTGTTATTGGTAAGTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CAA 90 bp AAACATCCTCTCACTGACTTCCTCATCCAACGTGCTGGAATGGGTAGAAACAACACTGTTGGAAAGAGCTaGCTGACCCACATTCAAGTC +
Preference number: 5 (lower is better)
Translates to: KHPLTDFLIQRAGMGRNNTVGKS*LTHIQV
Trigger: GACTTGAATGTGGGTCAGCAAGCTCTTTCCAACAGT...GTTGTTTCTACCCATTCCAGCACGTTGGATGAGGAAGTCAGTGAGAGGATGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR CAA 90 bp CTTCCCCCAGCATTAACTACCTGTGGTTTCCTTTTACCTAATTCGGGATATGGAGCCTGCCTTCAGCTCTaGGTTTTTCAAAACCTGGGA +
Preference number: 5 (lower is better)
Translates to: LPPALTTCGFLLPNSGYGACLQL*VFQNLG
Trigger: TCCCAGGTTTTGAAAAACCAAGAGCTGAAGGCAGGC...TCCATATCCCGAATTAGGTAAAAGGAAACCACAGGTAGTTAATGCTGGGGGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR CAA 90 bp ACAAAAATTACGCAGAGAATGAAGACATACAAGACCATTATCTTGGCAGGCATTCTGGCAGGGGTCTCCTaGGGCACAGATGAGAAAGGG +
Preference number: 5 (lower is better)
Translates to: TKITQRMKTYKTIILAGILAGVS*GTDEKG
Trigger: CCCTTTCTCATCTGTGCCCAAGGAGACCCCTGCCAG...AATGCCTGCCAAGATAATGGTCTTGTATGTCTTCATTCTCTGCGTAATTTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CAA 90 bp GTCTGTAAAAGCAGGTCTCAGCTAAAGCTCTCCACCGATCGTAAGCATTACCAAGATCGGATGATGATGTaGCCAAGAGAATGGCCAATG +
Preference number: 5 (lower is better)
Translates to: VCKSRSQLKLSTDRKHYQDRMMM*PREWPM
Trigger: CATTGGCCATTCTCTTGGCAACATCATCATCCGATC...TTGGTAATGCTTACGATCGGTGGAGAGCTTTAGCTGAGACCTGCTTTTACAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395297.6
ENST00000482951.6
CDS-3UTR CAA 90 bp CTGTCTTACTTATCCCTACTGTCCAGGTTCATTCATCTCTTCCATACAACGAAATGGCACATAACGGTCTaGGGGAGAAGCAACCAGCAC +
Preference number: 5 (lower is better)
Translates to: LSYLSLLSRFIHLFHTTKWHITV*GRSNQH
Trigger: GTGCTGGTTGCTTCTCCCCAAGACCGTTATGTGCCA...TTTCGTTGTATGGAAGAGATGAATGAACCTGGACAGTAGGGATAAGTAAGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CAA 90 bp AGTCACTTACCAATAACAGCTTATGTTGAGTCTTCAGTCTGGTTGTTCTCCTCCATTAAAGTGCAGTCCTaGGCTTCAACCAGAGGGCCC +
Preference number: 5 (lower is better)
Translates to: SHLPITAYVESSVWLFSSIKVQS*ASTRGP
Trigger: GGGCCCTCTGGTTGAAGCCAAGGACTGCACTTTAAT...GGAGGAGAACAACCAGACTGAAGACTCAACATAAGCTGTTATTGGTAAGTGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CAA 90 bp AGATGTACTTTCTACACAATTATAATAGATGCTCAGAGGCCAGAGAGGGTTTACCCGGTGCTGATGCGGTaGCTATGGTTATGGAACCCC +
Preference number: 5 (lower is better)
Translates to: RCTFYTIIIDAQRPERVYPVLMR*LWLWNP
Trigger: GGGGTTCCATAACCATAGCAACCGCATCAGCACCGG...GTAAACCCTCTCTGGCCTCTGAGCATCTATTATAATTGTGTAGAAAGTACATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CAA 90 bp GTCTGTAAAAGCAGGTCTCAGCTAAAGCTCTCCACCGATCGTAAGCATTACCAATGTGGAACTCTGCCTTaGCAAGACATTCAACTCTCC +
Preference number: 5 (lower is better)
Translates to: VCKSRSQLKLSTDRKHYQCGTLP*QDIQLS
Trigger: GGAGAGTTGAATGTCTTGCAAAGGCAGAGTTCCACA...TTGGTAATGCTTACGATCGGTGGAGAGCTTTAGCTGAGACCTGCTTTTACAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CAA 90 bp CTGTCTTACTTATCCCTACTGTCCAGGTTCATTCATCTCTTCCATACAACGAAAGACAGGGCCCATCATTaGGCCAGAAAGGAGAAGCTG +
Preference number: 5 (lower is better)
Translates to: LSYLSLLSRFIHLFHTTKDRAHH*ARKEKL
Trigger: CAGCTTCTCCTTTCTGGCCAAATGATGGGCCCTGTC...TTTCGTTGTATGGAAGAGATGAATGAACCTGGACAGTAGGGATAAGTAAGACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS CCA 90 bp AGTCTCATCAGTGAGAACTTGACAAGCTCACCAGGTTCCCACCACTaGGCTGCAGGAACTATAATGTTTTCTTTTGTGTTGACTCATCTC +
Preference number: 5 (lower is better)
Translates to: SLISENLTSSPGSHH*AAGTIMFSFVLTHL
Trigger: GAGATGAGTCAACACAAAAGAAAACATTATAGTTCCTGCAGCCCAGTGGTGGGAACCTGGTGAGCTTGTCAAGTTCTCACTGATGAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520283.1
CDS CCA 90 bp TGGGATGATCTTCTTGACCTAAAATTGCCATGGCAACCTTGTGGGTaGGGTGGAAGAGGTCACTATACAAACAGGTTATCAGTGACAGAT +
Preference number: 5 (lower is better)
Translates to: WDDLLDLKLPWQPCG*GGRGHYTNRLSVTD
Trigger: ATCTGTCACTGATAACCTGTTTGTATAGTGACCTCTTCCACCCCACCCACAAGGTTGCCATGGCAATTTTAGGTCAAGAAGATCATCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520283.1
CDS CCA 90 bp TTTCCTGTCTTTCAATGGGATGATCTTCTTGACCTAAAATTGCCATaGCAACCTTGTGGGTGGGGTGGAAGAGGTCACTATACAAACAGG +
Preference number: 5 (lower is better)
Translates to: FPVFQWDDLLDLKLP*QPCGWGGRGHYTNR
Trigger: CCTGTTTGTATAGTGACCTCTTCCACCCCACCCACAAGGTTGCCATGGCAATTTTAGGTCAAGAAGATCATCCCATTGAAAGACAGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520283.1
CDS-3UTR CAA 90 bp TCAGCATTATCCCTGAAGGTCAGCTGCAGTAGAGACCCGGATTTCTTCAGTTTCCAGGACTGCAAGTTTTaGGTGCTCCATGTAAAAGAA +
Preference number: 5 (lower is better)
Translates to: SALSLKVSCSRDPDFFSFQDCKF*VLHVKE
Trigger: TTCTTTTACATGGAGCACCAAAAACTTGCAGTCCTG...GAAACTGAAGAAATCCGGGTCTCTACTGCAGCTGACCTTCAGGGATAATGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CAA 90 bp TCAGCATTATCCCTGAAGGTCAGCTGCAGTAGAGACCCGGATTTCTTCAGTTTCCTGGAGGGGTTCTTATaGCTAGATTTTACGTCAATG +
Preference number: 5 (lower is better)
Translates to: SALSLKVSCSRDPDFFSFLEGFL*LDFTSM
Trigger: CATTGACGTAAAATCTAGCAATAAGAACCCCTCCAG...GAAACTGAAGAAATCCGGGTCTCTACTGCAGCTGACCTTCAGGGATAATGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CAA 90 bp GATGATGTTGCCAAGAGAATGGCCAATGAAGCTAATTCGGGATATGGAGAGGTTAAGCCTGGATGCCGCTaGGCAAACTTGTGTTACTTT +
Preference number: 5 (lower is better)
Translates to: DDVAKRMANEANSGYGEVKPGCR*ANLCYF
Trigger: AAAGTAACACAAGTTTGCCAAGCGGCATCCAGGCTT...AACCTCTCCATATCCCGAATTAGCTTCATTGGCCATTCTCTTGGCAACATCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CAA 90 bp CAAGTTAGCTTAGCTCAGTGGTATACAGAAGGCATCATATTATTGCTTTTATACCTGGCAGGGGTCTCCTaGGGCACAGATGAGAAAGGG +
Preference number: 5 (lower is better)
Translates to: QVSLAQWYTEGIILLLLYLAGVS*GTDEKG
Trigger: CCCTTTCTCATCTGTGCCCAAGGAGACCCCTGCCAG...GTATAAAAGCAATAATATGATGCCTTCTGTATACCACTGAGCTAAGCTAACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR CAA 90 bp GTCTGTAAAAGCAGGTCTCAGCTAAAGCTCTCCACCGATCGTAAGCATTACCAACAGATCCACCTTGAGTaGAAAATCTACTTCACTCAG +
Preference number: 5 (lower is better)
Translates to: VCKSRSQLKLSTDRKHYQQIHLE*KIYFTQ
Trigger: CTGAGTGAAGTAGATTTTCAACTCAAGGTGGATCTG...TTGGTAATGCTTACGATCGGTGGAGAGCTTTAGCTGAGACCTGCTTTTACAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395297.6
ENST00000482951.6
CDS-3UTR CAA 90 bp AAAGTGCAGTCCTTGGCTTCAACCAGAGGGCCCAGGAGGTTGTTGATCATTTCTTTCATCAGAATCCATTaGGGATGGTTTTATGGTAGA +
Preference number: 5 (lower is better)
Translates to: KVQSLASTRGPRRLLIISFIRIH*GWFYGR
Trigger: TCTACCATAAAACCATCCCAAATGGATTCTGATGAA...AGAAATGATCAACAACCTCCTGGGCCCTCTGGTTGAAGCCAAGGACTGCACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CAA 90 bp CTTATCCCTACTGTCCAGGTTCATTCATCTCTTCCATACAACGAAATGATTCTTCCACCTACTACCACTTaGCTTAGCCCAGTCCTGTCT +
Preference number: 5 (lower is better)
Translates to: LIPTVQVHSSLPYNEMILPPTTT*LSPVLS
Trigger: AGACAGGACTGGGCTAAGCAAAGTGGTAGTAGGTGG...AAGAATCATTTCGTTGTATGGAAGAGATGAATGAACCTGGACAGTAGGGATAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CAA 90 bp AGTCACTTACCAATAACAGCTTATGTTGAGTCTTCAGTCTGGTTGTTCTCCTCCAAGCCTGGATGCCGCTaGGCAAACTTGTGTTACTTT +
Preference number: 5 (lower is better)
Translates to: SHLPITAYVESSVWLFSSKPGCR*ANLCYF
Trigger: AAAGTAACACAAGTTTGCCAAGCGGCATCCAGGCTT...GGAGGAGAACAACCAGACTGAAGACTCAACATAAGCTGTTATTGGTAAGTGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CAA 90 bp CTGTCTTACTTATCCCTACTGTCCAGGTTCATTCATCTCTTCCATACAACGAAAAGAGTCACCACAAAGTaGAGAGCAAGATCCTGGGGA +
Preference number: 5 (lower is better)
Translates to: LSYLSLLSRFIHLFHTTKRVTTK*RARSWG
Trigger: TCCCCAGGATCTTGCTCTCAACTTTGTGGTGACTCT...TTTCGTTGTATGGAAGAGATGAATGAACCTGGACAGTAGGGATAAGTAAGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CAA 90 bp AATTCGGGATATGGAGAGGTTGTACAACTGAATGTGTTGAATGATTTCATCCAACCGGGGCCCTGCTGGTaGTCAGCATCTAAAACTATC +
Preference number: 5 (lower is better)
Translates to: NSGYGEVVQLNVLNDFIQPGPCW*SASKTI
Trigger: GATAGTTTTAGATGCTGACAACCAGCAGGGCCCCGG...TTGGATGAAATCATTCAACACATTCAGTTGTACAACCTCTCCATATCCCGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276737.10
ENST00000467365.1
ENST00000482951.6
CDS-3UTR CAA 90 bp AATTCGGGATATGGAGAGGTTGTACAACTGAATGTGTTGAATGATTTCATCCAACTAACCAGGGTGCTGTaGTTGTACAGGGTTCCCAGG +
Preference number: 5 (lower is better)
Translates to: NSGYGEVVQLNVLNDFIQLTRVL*LYRVPR
Trigger: CCTGGGAACCCTGTACAACAACAGCACCCTGGTTAG...TTGGATGAAATCATTCAACACATTCAGTTGTACAACCTCTCCATATCCCGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CAA 90 bp GTGCAAGACACAGATAAGTTCACAACCTCCACAGCCTTCAGGCTGTCCAGAGTATGTCATTTAGTCTATTaGCTCAGCTTTCTCGAATCT +
Preference number: 5 (lower is better)
Translates to: VQDTDKFTTSTAFRLSRVCHLVY*LSFLES
Trigger: AGATTCGAGAAAGCTGAGCAAATAGACTAAATGACA...TACTCTGGACAGCCTGAAGGCTGTGGAGGTTGTGAACTTATCTGTGTCTTGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR CAA 90 bp CCCCCTTCTGCTAGGTTAGTCTCACTCAGTGTTCCCTACTACAGACAAAGATGTTTCCTAGAAAACATCTaGAATGACACTCCAGGTAAC +
Preference number: 5 (lower is better)
Translates to: PPSARLVSLSVPYYRQRCFLENI*NDTPGN
Trigger: GTTACCTGGAGTGTCATTCAAGATGTTTTCTAGGAA...ACATCTTTGTCTGTAGTAGGGAACACTGAGTGAGACTAACCTAGCAGAAGGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CAA 90 bp ACACTCCTGCAAAGCTGCCCATCTGGACTCATTCCCATGGTCTGCTTTTATTTTACATTCCTTGCTCCCTaGTTTAGAAAACATGAGGAG +
Preference number: 5 (lower is better)
Translates to: TLLQSCPSGLIPMVCFYFTFLAP*FRKHEE
Trigger: CTCCTCATGTTTTCTAAACAAGGGAGCAAGGAATGT...AAAATAAAAGCAGACCATGGGAATGAGTCCAGATGGGCAGCTTTGCAGGAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CAA 90 bp CCCCCTTCTGCTAGGTTAGTCTCACTCAGTGTTCCCTACTACAGACAAAGATGTAAGAAGACATTTCTATaGAAAGATAGCCAGCACCCT +
Preference number: 5 (lower is better)
Translates to: PPSARLVSLSVPYYRQRCKKTFL*KDSQHP
Trigger: AGGGTGCTGGCTATCTTTCAATAGAAATGTCTTCTT...ACATCTTTGTCTGTAGTAGGGAACACTGAGTGAGACTAACCTAGCAGAAGGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS TCA 90 bp GGTAATACAATGAGCCTTGGAGGTAAGTCTATCATGAGGATTTACTaGTATCACCTGCACGTGAAATGCCAAATTCAGACTGCATCCCTC +
Preference number: 5 (lower is better)
Translates to: GNTMSLGGKSIMRIY*YHLHVKCQIQTASL
Trigger: GAGGGATGCAGTCTGAATTTGGCATTTCACGTGCAGGTGATATCAGTAAATCCTCATGATAGACTTACCTCCAAGGCTCATTGTATTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS TCA 90 bp CAAACATCCTTCTCATTCCTTACTCAGCAAGGGCTCATTAGCATTTaGCTCAGGCTCTGTCAATCAGTCGTCTTCAATCTCTTCTTTGTC +
Preference number: 5 (lower is better)
Translates to: QTSFSFLTQQGLISI*LRLCQSVVFNLFFV
Trigger: GACAAAGAAGAGATTGAAGACGACTGATTGACAGAGCCTGAGTCAAATGCTAATGAGCCCTTGCTGAGTAAGGAATGAGAAGGATGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523049.1
CDS-3UTR CAA 90 bp ACTGGATATGTCCCAGCATCAGATGTTTGGCCAGTCCAACATTCATCTTCAGGCAAACTCAACCGTTCCTaGTATTTCAGACATGATCTT +
Preference number: 5 (lower is better)
Translates to: TGYVPASDVWPVQHSSSGKLNRS*YFRHDL
Trigger: AAGATCATGTCTGAAATACAAGGAACGGTTGAGTTT...GCCTGAAGATGAATGTTGGACTGGCCAAACATCTGATGCTGGGACATATCCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482951.6
CDS-3UTR CAA 90 bp ATGATGATGTTGCCAAGAGAATGGCCAATGAAGCTAATTCGGGATATGGAGAGGCAGATCCACCTTGAGTaGAAAATCTACTTCACTCAG +
Preference number: 5 (lower is better)
Translates to: MMMLPREWPMKLIRDMERQIHLE*KIYFTQ
Trigger: CTGAGTGAAGTAGATTTTCAACTCAAGGTGGATCTG...CCTCTCCATATCCCGAATTAGCTTCATTGGCCATTCTCTTGGCAACATCATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CAA 90 bp AGATGTACTTTCTACACAATTATAATAGATGCTCAGAGGCCAGAGAGGGTTTACCCCAGCATCAGATGTTaGGCCAGTCCAACATTCATC +
Preference number: 5 (lower is better)
Translates to: RCTFYTIIIDAQRPERVYPSIRC*ASPTFI
Trigger: GATGAATGTTGGACTGGCCAAACATCTGATGCTGGG...GTAAACCCTCTCTGGCCTCTGAGCATCTATTATAATTGTGTAGAAAGTACATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CAA 90 bp GTGAGGACCGATCGGATGATGATGTTGCCAAGAGAATGGCCAATGAAGCTAATTTCATGGAGAGTTGTTTaGTCTGAAGAGATGGCATTT +
Preference number: 5 (lower is better)
Translates to: VRTDRMMMLPREWPMKLISWRVV*SEEMAF
Trigger: AAATGCCATCTCTTCAGACAAAACAACTCTCCATGA...AATTAGCTTCATTGGCCATTCTCTTGGCAACATCATCATCCGATCGGTCCTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CAA 90 bp ACAAAAATTACGCAGAGAATGAAGACATACAAGACCATTATCTTGGCAGGCATTGGGGAACCTTGGCTCTaGCTGTGCATATCTGAAGGT +
Preference number: 5 (lower is better)
Translates to: TKITQRMKTYKTIILAGIGEPWL*LCISEG
Trigger: ACCTTCAGATATGCACAGCAAGAGCCAAGGTTCCCC...AATGCCTGCCAAGATAATGGTCTTGTATGTCTTCATTCTCTGCGTAATTTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CAA 90 bp ACAAAAATTACGCAGAGAATGAAGACATACAAGACCATTATCTTGGCAGGCATTTTCAGGCACCTGATGTaGAGAGAGACCCTCAACCTC +
Preference number: 5 (lower is better)
Translates to: TKITQRMKTYKTIILAGIFRHLM*RETLNL
Trigger: GAGGTTGAGGGTCTCTCTCAACATCAGGTGCCTGAA...AATGCCTGCCAAGATAATGGTCTTGTATGTCTTCATTCTCTGCGTAATTTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CAA 90 bp TTCCTTTTACCTAATTCGGGATATGGAGAGGTTGTACAACTGAATGTGTTGAATCCTGTTGAGTTCCTGTaGATGGCATCAGCAGCTGAC +
Preference number: 5 (lower is better)
Translates to: FLLPNSGYGEVVQLNVLNPVEFL*MASAAD
Trigger: GTCAGCTGCTGATGCCATCAACAGGAACTCAACAGG...ATTCAACACATTCAGTTGTACAACCTCTCCATATCCCGAATTAGGTAAAAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR CAA 90 bp GAAGCTAATTCGGGATATGGAGAGGTTGTACAACTGAATGTGTTGAATGATTTCGCCTGCCTTCAGCTCTaGGTTTTTCAAAACCTGGGA +
Preference number: 5 (lower is better)
Translates to: EANSGYGEVVQLNVLNDFACLQL*VFQNLG
Trigger: TCCCAGGTTTTGAAAAACCAAGAGCTGAAGGCAGGC...GAAATCATTCAACACATTCAGTTGTACAACCTCTCCATATCCCGAATTAGCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS-3UTR CAA 90 bp TGGGCATCACATTTTCTTGAACAACTGACACATTTGAATCTATTGAGGATTCTACTAACCAGGGTGCTGTaGTTGTACAGGGTTCCCAGG +
Preference number: 5 (lower is better)
Translates to: WASHFLEQLTHLNLLRILLTRVL*LYRVPR
Trigger: CCTGGGAACCCTGTACAACAACAGCACCCTGGTTAG...TAGAATCCTCAATAGATTCAAATGTGTCAGTTGTTCAAGAAAATGTGATGCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CAA 90 bp CTCCTCCTATCTGATCTCACTTTTGTCCCTGTCGTCTATTGGTTTTTATCAACGCCTGTGTGTCTGTCTTaGAGGGCAGTTTTACACATT +
Preference number: 5 (lower is better)
Translates to: LLLSDLTFVPVVYWFLSTPVCLS*RAVLHI
Trigger: AATGTGTAAAACTGCCCTCAAAGACAGACACACAGG...CGTTGATAAAAACCAATAGACGACAGGGACAAAAGTGAGATCAGATAGGAGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CAA 90 bp CCCCCTTCTGCTAGGTTAGTCTCACTCAGTGTTCCCTACTACAGACAAAGATGTTGTCATTTAGTCTATTaGCTCAGCTTTCTCGAATCT +
Preference number: 5 (lower is better)
Translates to: PPSARLVSLSVPYYRQRCCHLVY*LSFLES
Trigger: AGATTCGAGAAAGCTGAGCAAATAGACTAAATGACA...ACATCTTTGTCTGTAGTAGGGAACACTGAGTGAGACTAACCTAGCAGAAGGGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS GCA 90 bp GAATATGCAGAAGTGAAACTGTGTGAGTTCCTGAGCCTTCTACTTTaGTATTTTGGAGTGTTCCTGCCACTATGTAACAAAGCCTACACT +
Preference number: 5 (lower is better)
Translates to: EYAEVKLCEFLSLLL*YFGVFLPLCNKAYT
Trigger: AGTGTAGGCTTTGTTACATAGTGGCAGGAACACTCCAAAATAGCAAAGTAGAAGGCTCAGGAACTCACACAGTTTCACTTCTGCATATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520283.1
CDS-3UTR CAA 90 bp GTCTGTAAAAGCAGGTCTCAGCTAAAGCTCTCCACCGATCGTAAGCATTACCAAAAACTCAACCGTTCCTaGTATTTCAGACATGATCTT +
Preference number: 5 (lower is better)
Translates to: VCKSRSQLKLSTDRKHYQKLNRS*YFRHDL
Trigger: AAGATCATGTCTGAAATACAAGGAACGGTTGAGTTT...TTGGTAATGCTTACGATCGGTGGAGAGCTTTAGCTGAGACCTGCTTTTACAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395297.6
ENST00000482951.6
CDS-3UTR CAA 90 bp TGGGCATCACATTTTCTTGAACAACTGACACATTTGAATCTATTGAGGATTCTAGTCTGTGGGGGATCCTaGAAGACACCTTCAAGGTCA +
Preference number: 5 (lower is better)
Translates to: WASHFLEQLTHLNLLRILVCGGS*KTPSRS
Trigger: TGACCTTGAAGGTGTCTTCAAGGATCCCCCACAGAC...TAGAATCCTCAATAGATTCAAATGTGTCAGTTGTTCAAGAAAATGTGATGCCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CAA 90 bp CAAGTTAGCTTAGCTCAGTGGTATACAGAAGGCATCATATTATTGCTTTTATACAGCAAAACCTCCATCTaGCTGCTTGGTGTCCGCATC +
Preference number: 5 (lower is better)
Translates to: QVSLAQWYTEGIILLLLYSKTSI*LLGVRI
Trigger: GATGCGGACACCAAGCAGCAAGATGGAGGTTTTGCT...GTATAAAAGCAATAATATGATGCCTTCTGTATACCACTGAGCTAAGCTAACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR CAA 90 bp AATTCGGGATATGGAGAGGTTGTACAACTGAATGTGTTGAATGATTTCATCCAATGCTTCCCTTTCCCTTaGGGGATGTCTATGTATCCG +
Preference number: 5 (lower is better)
Translates to: NSGYGEVVQLNVLNDFIQCFPFP*GMSMYP
Trigger: CGGATACATAGACATCCCCAAAGGGAAAGGGAAGCA...TTGGATGAAATCATTCAACACATTCAGTTGTACAACCTCTCCATATCCCGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276737.10
ENST00000467365.1
ENST00000482951.6
CDS-3UTR CAA 90 bp TTACCTAATTCGGGATATGGAGAGGTTGTACAACTGAATGTGTTGAATGATTTCTGCTTCCCTTTCCCTTaGGGGATGTCTATGTATCCG +
Preference number: 5 (lower is better)
Translates to: LPNSGYGEVVQLNVLNDFCFPFP*GMSMYP
Trigger: CGGATACATAGACATCCCCAAAGGGAAAGGGAAGCA...GAAATCATTCAACACATTCAGTTGTACAACCTCTCCATATCCCGAATTAGGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR CAA 90 bp AGATGTACTTTCTACACAATTATAATAGATGCTCAGAGGCCAGAGAGGGTTTACACTGTTGGAAAGAGCTaGCTGACCCACATTCAAGTC +
Preference number: 5 (lower is better)
Translates to: RCTFYTIIIDAQRPERVYTVGKS*LTHIQV
Trigger: GACTTGAATGTGGGTCAGCAAGCTCTTTCCAACAGT...GTAAACCCTCTCTGGCCTCTGAGCATCTATTATAATTGTGTAGAAAGTACATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CAA 90 bp CAAGTTAGCTTAGCTCAGTGGTATACAGAAGGCATCATATTATTGCTTTTATACGGAAACAGGGTCTGTTaGGAAGAGAATCCAGCCCTG +
Preference number: 5 (lower is better)
Translates to: QVSLAQWYTEGIILLLLYGNRVC*EENPAL
Trigger: CAGGGCTGGATTCTCTTCCAAACAGACCCTGTTTCC...GTATAAAAGCAATAATATGATGCCTTCTGTATACCACTGAGCTAAGCTAACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR CAA 90 bp TGGGCATCACATTTTCTTGAACAACTGACACATTTGAATCTATTGAGGATTCTAAGGGCGTGGAACACGTaGTGTCGGATTAAAGTGCAG +
Preference number: 5 (lower is better)
Translates to: WASHFLEQLTHLNLLRILRAWNT*CRIKVQ
Trigger: CTGCACTTTAATCCGACACAACGTGTTCCACGCCCT...TAGAATCCTCAATAGATTCAAATGTGTCAGTTGTTCAAGAAAATGTGATGCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS GCA 90 bp TTTACTATAGTATCTTCTCATATTCTGAGAGGTTGGAGATTTCCTTaGCTTTGTCCCTTGGACCTTGGAGTGCTGCAGATCAATACTGAT +
Preference number: 5 (lower is better)
Translates to: FTIVSSHILRGWRFP*LCPLDLGVLQINTD
Trigger: ATCAGTATTGATCTGCAGCACTCCAAGGTCCAAGGGACAAAGGCAAGGAAATCTCCAACCTCTCAGAATATGAGAAGATACTATAGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520283.1
ENST00000520954.1
CDS-3UTR CAA 90 bp CTGTCTTACTTATCCCTACTGTCCAGGTTCATTCATCTCTTCCATACAACGAAACAGATCCACCTTGAGTaGAAAATCTACTTCACTCAG +
Preference number: 5 (lower is better)
Translates to: LSYLSLLSRFIHLFHTTKQIHLE*KIYFTQ
Trigger: CTGAGTGAAGTAGATTTTCAACTCAAGGTGGATCTG...TTTCGTTGTATGGAAGAGATGAATGAACCTGGACAGTAGGGATAAGTAAGACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CAA 90 bp CTGTCTTACTTATCCCTACTGTCCAGGTTCATTCATCTCTTCCATACAACGAAACAGGACTGCAAGTTTTaGGTGCTCCATGTAAAAGAA +
Preference number: 5 (lower is better)
Translates to: LSYLSLLSRFIHLFHTTKQDCKF*VLHVKE
Trigger: TTCTTTTACATGGAGCACCAAAAACTTGCAGTCCTG...TTTCGTTGTATGGAAGAGATGAATGAACCTGGACAGTAGGGATAAGTAAGACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CAA 90 bp CTCCTCCTATCTGATCTCACTTTTGTCCCTGTCGTCTATTGGTTTTTATCAACGTCATGGAGAGTTGTTTaGTCTGAAGAGATGGCATTT +
Preference number: 5 (lower is better)
Translates to: LLLSDLTFVPVVYWFLSTSWRVV*SEEMAF
Trigger: AAATGCCATCTCTTCAGACAAAACAACTCTCCATGA...CGTTGATAAAAACCAATAGACGACAGGGACAAAAGTGAGATCAGATAGGAGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CAA 90 bp TTACCTAATTCGGGATATGGAGAGGTTGTACAACTGAATGTGTTGAATGATTTCTGCCGCTTGGCAAACTaGTGTTACTTTCTGTGTGTC +
Preference number: 5 (lower is better)
Translates to: LPNSGYGEVVQLNVLNDFCRLAN*CYFLCV
Trigger: GACACACAGAAAGTAACACAAGTTTGCCAAGCGGCA...GAAATCATTCAACACATTCAGTTGTACAACCTCTCCATATCCCGAATTAGGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR CAA 90 bp TTACCTAATTCGGGATATGGAGAGGTTGTACAACTGAATGTGTTGAATGATTTCGGAGCAGATACAGACTaGGTTAACTTAGTGAGTGCC +
Preference number: 5 (lower is better)
Translates to: LPNSGYGEVVQLNVLNDFGADTD*VNLVSA
Trigger: GGCACTCACTAAGTTAACCAAGTCTGTATCTGCTCC...GAAATCATTCAACACATTCAGTTGTACAACCTCTCCATATCCCGAATTAGGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR CAA 90 bp CAAGTTAGCTTAGCTCAGTGGTATACAGAAGGCATCATATTATTGCTTTTATACAGAGTCACCACAAAGTaGAGAGCAAGATCCTGGGGA +
Preference number: 5 (lower is better)
Translates to: QVSLAQWYTEGIILLLLYRVTTK*RARSWG
Trigger: TCCCCAGGATCTTGCTCTCAACTTTGTGGTGACTCT...GTATAAAAGCAATAATATGATGCCTTCTGTATACCACTGAGCTAAGCTAACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR CAA 90 bp TTAGCTCAGTGGTATACAGAAGGCATCATATTATTGCTTTTATACAGCAAACACAGGAAGACAGTGTCCTaGAGCATCAAACTGCTTCCC +
Preference number: 5 (lower is better)
Translates to: LAQWYTEGIILLLLYSKHRKTVS*SIKLLP
Trigger: GGGAAGCAGTTTGATGCTCAAGGACACTGTCTTCCT...GTGTTTGCTGTATAAAAGCAATAATATGATGCCTTCTGTATACCACTGAGCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR CAA 90 bp TGGGCATCACATTTTCTTGAACAACTGACACATTTGAATCTATTGAGGATTCTAGCCTGCCTTCAGCTCTaGGTTTTTCAAAACCTGGGA +
Preference number: 5 (lower is better)
Translates to: WASHFLEQLTHLNLLRILACLQL*VFQNLG
Trigger: TCCCAGGTTTTGAAAAACCAAGAGCTGAAGGCAGGC...TAGAATCCTCAATAGATTCAAATGTGTCAGTTGTTCAAGAAAATGTGATGCCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS TCA 90 bp TCCACCAGGAGCTGTACAAGGCAAAGTTTCTGGTGTGTATATACCTaGAAATCTTTGAGGAGGCTCCAGTACAAAGATAATATTCTTCTA +
Preference number: 5 (lower is better)
Translates to: STRSCTRQSFWCVYT*KSLRRLQYKDNILL
Trigger: TAGAAGAATATTATCTTTGTACTGGAGCCTCCTCAAAGATTTTCAGGTATATACACACCAGAAACTTTGCCTTGTACAGCTCCTGGTGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520283.1
CDS-3UTR CAA 90 bp ACAAAAATTACGCAGAGAATGAAGACATACAAGACCATTATCTTGGCAGGCATTCATGTCCATATGATTTaGTGTGGCCACATTCTCACC +
Preference number: 5 (lower is better)
Translates to: TKITQRMKTYKTIILAGIHVHMI*CGHILT
Trigger: GGTGAGAATGTGGCCACACAAAATCATATGGACATG...AATGCCTGCCAAGATAATGGTCTTGTATGTCTTCATTCTCTGCGTAATTTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CAA 90 bp AGATGTACTTTCTACACAATTATAATAGATGCTCAGAGGCCAGAGAGGGTTTACCTGGAGGGGTTCTTATaGCTAGATTTTACGTCAATG +
Preference number: 5 (lower is better)
Translates to: RCTFYTIIIDAQRPERVYLEGFL*LDFTSM
Trigger: CATTGACGTAAAATCTAGCAATAAGAACCCCTCCAG...GTAAACCCTCTCTGGCCTCTGAGCATCTATTATAATTGTGTAGAAAGTACATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CAA 90 bp CAAGTTAGCTTAGCTCAGTGGTATACAGAAGGCATCATATTATTGCTTTTATACAAGCCTGGATGCCGCTaGGCAAACTTGTGTTACTTT +
Preference number: 5 (lower is better)
Translates to: QVSLAQWYTEGIILLLLYKPGCR*ANLCYF
Trigger: AAAGTAACACAAGTTTGCCAAGCGGCATCCAGGCTT...GTATAAAAGCAATAATATGATGCCTTCTGTATACCACTGAGCTAAGCTAACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR CAA 90 bp TTAGCTCAGTGGTATACAGAAGGCATCATATTATTGCTTTTATACAGCAAACACACTGTTGGAAAGAGCTaGCTGACCCACATTCAAGTC +
Preference number: 5 (lower is better)
Translates to: LAQWYTEGIILLLLYSKHTVGKS*LTHIQV
Trigger: GACTTGAATGTGGGTCAGCAAGCTCTTTCCAACAGT...GTGTTTGCTGTATAAAAGCAATAATATGATGCCTTCTGTATACCACTGAGCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467365.1
CDS-3UTR CAA 90 bp ACAAAAATTACGCAGAGAATGAAGACATACAAGACCATTATCTTGGCAGGCATTTGTCCCTGTCGTCTATaGGTTTTTATCAACGCAGTG +
Preference number: 5 (lower is better)
Translates to: TKITQRMKTYKTIILAGICPCRL*VFINAV
Trigger: CACTGCGTTGATAAAAACCAATAGACGACAGGGACA...AATGCCTGCCAAGATAATGGTCTTGTATGTCTTCATTCTCTGCGTAATTTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CAA 90 bp AAACTTGTATTTACCAATAGTGTCACCTTTATCCCTCTTTACCTTAAGTCACCCGCAGCTGGACGTTTATaGCCATTAGTTCTCACTATG +
Preference number: 5 (lower is better)
Translates to: KLVFTNSVTFIPLYLKSPAAGRL*PLVLTM
Trigger: CATAGTGAGAACTAATGGCAATAAACGTCCAGCTGC...GGGTGACTTAAGGTAAAGAGGGATAAAGGTGACACTATTGGTAAATACAAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS TCA 90 bp AAAGAGTGGGACAATGACACTTTGAATGGGGGTGTTTTATTGGATTaGGACCAAACTGGAAATCTTTATCCATCAGCATCACTATTGTGT +
Preference number: 5 (lower is better)
Translates to: KEWDNDTLNGGVLLD*DQTGNLYPSASLLC
Trigger: ACACAATAGTGATGCTGATGGATAAAGATTTCCAGTTTGGTCTCAATCCAATAAAACACCCCCATTCAAAGTGTCATTGTCCCACTCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520283.1
CDS GCA 90 bp CCAGTTAGTACATACATTCCACGAGAGAAAGAATTTCTGTTTGTTTaGAGATTTCACTCACTACCTGAAACAATGCCTGCAAGTATGTTC +
Preference number: 5 (lower is better)
Translates to: PVSTYIPREKEFLFV*RFHSLPETMPASMF
Trigger: GAACATACTTGCAGGCATTGTTTCAGGTAGTGAGTGAAATCTGCAAACAAACAGAAATTCTTTCTCTCGTGGAATGTATGTACTAACTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520283.1
CDS-3UTR CAA 90 bp TGGGCATCACATTTTCTTGAACAACTGACACATTTGAATCTATTGAGGATTCTAGAAACCCTAAATCCATaGTGTGGAACTCTGCCTTTG +
Preference number: 5 (lower is better)
Translates to: WASHFLEQLTHLNLLRILETLNP*CGTLPL
Trigger: CAAAGGCAGAGTTCCACACAATGGATTTAGGGTTTC...TAGAATCCTCAATAGATTCAAATGTGTCAGTTGTTCAAGAAAATGTGATGCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CAA 90 bp AGATGTACTTTCTACACAATTATAATAGATGCTCAGAGGCCAGAGAGGGTTTACTTCATCAGAATCCATTaGGGATGGTTTTATGGTAGA +
Preference number: 5 (lower is better)
Translates to: RCTFYTIIIDAQRPERVYFIRIH*GWFYGR
Trigger: TCTACCATAAAACCATCCCAAATGGATTCTGATGAA...GTAAACCCTCTCTGGCCTCTGAGCATCTATTATAATTGTGTAGAAAGTACATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CAA 90 bp TGGGCATCACATTTTCTTGAACAACTGACACATTTGAATCTATTGAGGATTCTATATCTGATCTCACTTTaGTCCCTGTCGTCTATTGGT +
Preference number: 5 (lower is better)
Translates to: WASHFLEQLTHLNLLRILYLISL*SLSSIG
Trigger: ACCAATAGACGACAGGGACAAAAGTGAGATCAGATA...TAGAATCCTCAATAGATTCAAATGTGTCAGTTGTTCAAGAAAATGTGATGCCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS-3UTR CAA 90 bp AGATGTACTTTCTACACAATTATAATAGATGCTCAGAGGCCAGAGAGGGTTTACTTTCAAAACTCCCCTTaGAGTCACTTACCAATAACA +
Preference number: 5 (lower is better)
Translates to: RCTFYTIIIDAQRPERVYFQNSP*SHLPIT
Trigger: TGTTATTGGTAAGTGACTCAAAGGGGAGTTTTGAAA...GTAAACCCTCTCTGGCCTCTGAGCATCTATTATAATTGTGTAGAAAGTACATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS CCA 90 bp TTGGTGGTGTTGATGTTCTGGATTTTGGTCATTCTGATAGGTGTGTaGTGGTATCTCATTGCTGTTTTCATTTACATTTATCTGATAAAC +
Preference number: 5 (lower is better)
Translates to: LVVLMFWILVILIGV*WYLIAVFIYIYLIN
Trigger: GTTTATCAGATAAATGTAAATGAAAACAGCAATGAGATACCACCACACACCTATCAGAATGACCAAAATCCAGAACATCAACACCACCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523049.1
CDS-3UTR CAA 90 bp AATTCGGGATATGGAGAGGTTGTACAACTGAATGTGTTGAATGATTTCATCCAAAAACTCAACCGTTCCTaGTATTTCAGACATGATCTT +
Preference number: 5 (lower is better)
Translates to: NSGYGEVVQLNVLNDFIQKLNRS*YFRHDL
Trigger: AAGATCATGTCTGAAATACAAGGAACGGTTGAGTTT...TTGGATGAAATCATTCAACACATTCAGTTGTACAACCTCTCCATATCCCGAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000482951.6
CDS GCA 72 bp CCCGCGGCGAGGCTGCCTGGAGGAGGAGCGAGCGGATaGTGCCCTCGCCCGCCGCCGCCGGTGCTGATGCGG +
Preference number: 6 (lower is better)
Translates to: PAARLPGGGASG*CPRPPPPVLMR
Trigger: CCGCATCAGCACCGGCGGCGGCGGGCGAGGGCAGCATCCGCTCGCTCCTCCTCCAGGCAGCCTCGCCGCGGG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS CAA 90 bp CGGCGGCGGGCGGACTGGGGAGTCCGCAGCACCTGCGAGCTGGTGTaGGGTCCCCGCGGCGAGGCTGCCTGGAGGAGGAGCGAGCGGATG +
Preference number: 6 (lower is better)
Translates to: RRRADWGVRSTCELV*GPRGEAAWRRSERM
Trigger: CATCCGCTCGCTCCTCCTCCAGGCAGCCTCGCCGCGGGGACCCAACACCAGCTCGCAGGTGCTGCGGACTCCCCAGTCCGCCCGCCGCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS CCA 72 bp TGCGAGCTGGTGTTGGGTCCCCGCGGCGAGGCTGCCTaGAGGAGGAGCGAGCGGATGCTGCCCTCGCCCGCC +
Preference number: 6 (lower is better)
Translates to: CELVLGPRGEAA*RRSERMLPSPA
Trigger: GGCGGGCGAGGGCAGCATCCGCTCGCTCCTCCTCCAGGCAGCCTCGCCGCGGGGACCCAACACCAGCTCGCA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS CCA 72 bp CGGACTGGGGAGTCCGCAGCACCTGCGAGCTGGTGTTaGGTCCCCGCGGCGAGGCTGCCTGGAGGAGGAGCG +
Preference number: 6 (lower is better)
Translates to: RTGESAAPASWC*VPAARLPGGGA
Trigger: CGCTCCTCCTCCAGGCAGCCTCGCCGCGGGGACCCAACACCAGCTCGCAGGTGCTGCGGACTCCCCAGTCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS CAA 72 bp GCGGACTGGGGAGTCCGCAGCACCTGCGAGCTGGTGTaGGGTCCCCGCGGCGAGGCTGCCTGGAGGAGGAGC +
Preference number: 6 (lower is better)
Translates to: ADWGVRSTCELV*GPRGEAAWRRS
Trigger: GCTCCTCCTCCAGGCAGCCTCGCCGCGGGGACCCAACACCAGCTCGCAGGTGCTGCGGACTCCCCAGTCCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS CAA 90 bp CTGGGTCCCTCTCTCTCCTCTTTCGCCGTCTCTGGCCGCCAACAGTaGCGGCGGCGGCGGCGGCGGGCGGACTGGGGAGTCCGCAGCACC +
Preference number: 6 (lower is better)
Translates to: LGPSLSSFAVSGRQQ*RRRRRRADWGVRST
Trigger: GGTGCTGCGGACTCCCCAGTCCGCCCGCCGCCGCCGCCGCCGCAACTGTTGGCGGCCAGAGACGGCGAAAGAGGAGAGAGAGGGACCCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000395297.6
CDS CAA 72 bp TCTCTCTCCTCTTTCGCCGTCTCTGGCCGCCAACAGTaGCGGCGGCGGCGGCGGCGGGCGGACTGGGGAGTC +
Preference number: 6 (lower is better)
Translates to: SLSSFAVSGRQQ*RRRRRRADWGV
Trigger: GACTCCCCAGTCCGCCCGCCGCCGCCGCCGCCGCAACTGTTGGCGGCCAGAGACGGCGAAAGAGGAGAGAGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276737.10
ENST00000395297.6
CDS TCA 72 bp CGAGCGGATGCTGCCCTCGCCCGCCGCCGCCGGTGCTaGTGCGGTTGCTATGGTTATGGAACCCCGCAACTG +
Preference number: 6 (lower is better)
Translates to: RADAALARRRRC*CGCYGYGTPQL
Trigger: CAGTTGCGGGGTTCCATAACCATAGCAACCGCATCAGCACCGGCGGCGGCGGGCGAGGGCAGCATCCGCTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS GCA 72 bp GCTGATGCGGTTGCTATGGTTATGGAACCCCGCAACTaGCCCCCTCTCCGTGCAACAGCTGCCCGGCCGCGG +
Preference number: 6 (lower is better)
Translates to: ADAVAMVMEPRN*PPLRATAARPR
Trigger: CCGCGGCCGGGCAGCTGTTGCACGGAGAGGGGGGCAGTTGCGGGGTTCCATAACCATAGCAACCGCATCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395297.6
CDS CCA 72 bp ACCTCTGTCTGCCCAGCGATGGAGGCACTCAGTCTGTaGGGGATCCTTGAAGACACCTTCAAGGTCACTCGG +
Preference number: 6 (lower is better)
Translates to: TSVCPAMEALSL*GILEDTFKVTR
Trigger: CCGAGTGACCTTGAAGGTGTCTTCAAGGATCCCCCACAGACTGAGTGCCTCCATCGCTGGGCAGACAGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520380.1
CDS GCA 72 bp GGGGCTCTTCCCCCTTCACTCGATACCTCTCCTTCCTaGCGCCTTGTGAAGAAGGTGCCTTGTTTCTCCTTC +
Preference number: 6 (lower is better)
Translates to: GALPPSLDTSPS*RLVKKVPCFSF
Trigger: GAAGGAGAAACAAGGCACCTTCTTCACAAGGCGGCAGGAAGGAGAGGTATCGAGTGAAGGGGGAAGAGCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520283.1
CDS CAA 72 bp GCCTCAGTGGAGGAAGTGCTCACTCTAGCAAGTGCCTaGGATGACCGAGTGGCTGCTCCACGTGGCTACAAT +
Preference number: 6 (lower is better)
Translates to: ASVEEVLTLASA*DDRVAAPRGYN
Trigger: ATTGTAGCCACGTGGAGCAGCCACTCGGTCATCCAAGGCACTTGCTAGAGTGAGCACTTCCTCCACTGAGGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520283.1
CDS CAA 90 bp CCTCTGTCTGCCCAGCGATGGAGGCACTCAGTCTGTGGGGGATCCTaGAAGACACCTTCAAGGTCACTCGGATCTGGTAATACCCTCTCT +
Preference number: 6 (lower is better)
Translates to: PLSAQRWRHSVCGGS*KTPSRSLGSGNTLS
Trigger: AGAGAGGGTATTACCAGATCCGAGTGACCTTGAAGGTGTCTTCAAGGATCCCCCACAGACTGAGTGCCTCCATCGCTGGGCAGACAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520380.1
CDS CCA 72 bp GGCCAGGATGATCAGACATCACCTGAGGATGATGCCTaGCACAGTAGTCCCAACCAGATACTGGACCAGCCA +
Preference number: 6 (lower is better)
Translates to: GQDDQTSPEDDA*HSSPNQILDQP
Trigger: TGGCTGGTCCAGTATCTGGTTGGGACTACTGTGCCAGGCATCATCCTCAGGTGATGTCTGATCATCCTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520283.1
CDS CAA 90 bp TCTCTGTCTGCCCAGCGATGGAGGCACTCAGTCTGTGGGGGATCCTaGAAGACACCTTCAAGGTCACTCGGATCTGGTAATACCCTCTCT +
Preference number: 6 (lower is better)
Translates to: SLSAQRWRHSVCGGS*KTPSRSLGSGNTLS
Trigger: AGAGAGGGTATTACCAGATCCGAGTGACCTTGAAGGTGTCTTCAAGGATCCCCCACAGACTGAGTGCCTCCATCGCTGGGCAGACAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000160713.8
ENST00000276737.10
ENST00000395297.6
CDS CAA 90 bp GACCCTCCAGCCTCAGTGGAGGAAGTGCTCACTCTAGCAAGTGCCTaGGATGACCGAGTGGCTGCTCCACGTGGCTACAATGTTAATGAT +
Preference number: 6 (lower is better)
Translates to: DPPASVEEVLTLASA*DDRVAAPRGYNVND
Trigger: ATCATTAACATTGTAGCCACGTGGAGCAGCCACTCGGTCATCCAAGGCACTTGCTAGAGTGAGCACTTCCTCCACTGAGGCTGGAGGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520283.1
CDS TCA 72 bp ATCAGGGTGTTCTTGCCAGTCTCATCAGTGAGAACTTaGCAAGCTCACCAGGTTCCCACCACTGGGCTGCAG +
Preference number: 6 (lower is better)
Translates to: IRVFLPVSSVRT*QAHQVPTTGLQ
Trigger: CTGCAGCCCAGTGGTGGGAACCTGGTGAGCTTGTCAAGTTCTCACTGATGAGACTGGCAAGAACACCCTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520283.1
CDS TCA 72 bp CCCCTTCACTCGATACCTCTCCTTCCTGCCGCCTTGTaGAGAAGGTGCCTTGTTTCTCCTTCCCCTTATGTC +
Preference number: 6 (lower is better)
Translates to: PLHSIPLLPAAL*RRCLVSPSPYV
Trigger: GACATAAGGGGAAGGAGAAACAAGGCACCTTCTTCACAAGGCGGCAGGAAGGAGAGGTATCGAGTGAAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520283.1
CDS GCA 72 bp GTTCCTGGGATGCCAACACTAATCCTGGCTTACCTGTaGAAGAATGGACCCACTGGAGAACTGGAGTGCAGG +
Preference number: 6 (lower is better)
Translates to: VPGMPTLILAYL*KNGPTGELECR
Trigger: CCTGCACTCCAGTTCTCCAGTGGGTCCATTCTTGCACAGGTAAGCCAGGATTAGTGTTGGCATCCCAGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520283.1
CDS CCA 72 bp GATGCCAACACTAATCCTGGCTTACCTGTGCAAGAATaGACCCACTGGAGAACTGGAGTGCAGGTGCGAGGA +
Preference number: 6 (lower is better)
Translates to: DANTNPGLPVQE*THWRTGVQVRG
Trigger: TCCTCGCACCTGCACTCCAGTTCTCCAGTGGGTCCATTCTTGCACAGGTAAGCCAGGATTAGTGTTGGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520283.1
CDS CAA 90 bp TCTCTGTCTGCCCAGCGATGGAGGCACTCAGTCTGTGGGGGATCCTaGAAGACACCTTCAAGGTCACTCGGATCTGGTAATACCTGCATA +
Preference number: 6 (lower is better)
Translates to: SLSAQRWRHSVCGGS*KTPSRSLGSGNTCI
Trigger: TATGCAGGTATTACCAGATCCGAGTGACCTTGAAGGTGTCTTCAAGGATCCCCCACAGACTGAGTGCCTCCATCGCTGGGCAGACAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517849.1
CDS CCA 72 bp TGGCTTACCTGTGCAAGAATGGACCCACTGGAGAACTaGAGTGCAGGTGCGAGGATCATAGGGAAGATAGTG +
Preference number: 6 (lower is better)
Translates to: WLTCARMDPLEN*SAGARIIGKIV
Trigger: CACTATCTTCCCTATGATCCTCGCACCTGCACTCCAGTTCTCCAGTGGGTCCATTCTTGCACAGGTAAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520283.1
CDS CCA 72 bp CCCACCTGTCATGGAAGGAACCTGGTGGGAGGTAATTaGATCATGGGGGCAGTTACTCTCATGCTGTTCTTG +
Preference number: 6 (lower is better)
Translates to: PTCHGRNLVGGN*IMGAVTLMLFL
Trigger: CAAGAACAGCATGAGAGTAACTGCCCCCATGATCCAATTACCTCCCACCAGGTTCCTTCCATGACAGGTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520283.1
CDS CAA 72 bp TATCAGGGTGTTCTTGCCAGTCTCATCAGTGAGAACTaGACAAGCTCACCAGGTTCCCACCACTGGGCTGCA +
Preference number: 6 (lower is better)
Translates to: YQGVLASLISEN*TSSPGSHHWAA
Trigger: TGCAGCCCAGTGGTGGGAACCTGGTGAGCTTGTCAAGTTCTCACTGATGAGACTGGCAAGAACACCCTGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520283.1
CDS CAA 90 bp ACTAAGAGCTATCAGGGTGTTCTTGCCAGTCTCATCAGTGAGAACTaGACAAGCTCACCAGGTTCCCACCACTGGGCTGCAGGAACTATA +
Preference number: 6 (lower is better)
Translates to: TKSYQGVLASLISEN*TSSPGSHHWAAGTI
Trigger: TATAGTTCCTGCAGCCCAGTGGTGGGAACCTGGTGAGCTTGTCAAGTTCTCACTGATGAGACTGGCAAGAACACCCTGATAGCTCTTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520283.1
CDS CAA 90 bp AGGACATTTCCTAGGGGGAGGGAACATGTCATGTTGGGTTTCCCTTaGACTGGAGTAGTCAAGGGATACTCCAGTCTCTGTGAATGGGGA +
Preference number: 6 (lower is better)
Translates to: RTFPRGREHVMLGFP*TGVVKGYSSLCEWG
Trigger: TCCCCATTCACAGAGACTGGAGTATCCCTTGACTACTCCAGTCAAAGGGAAACCCAACATGACATGTTCCCTCCCCCTAGGAAATGTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520283.1
CDS TCA 72 bp ACAAGCCAAGCTGTGTACTTCATGTTGAACAGGAAATaGGCTGGGCTGGTATGTAGAAGGGCTGAGCACCCA +
Preference number: 6 (lower is better)
Translates to: TSQAVYFMLNRK*AGLVCRRAEHP
Trigger: TGGGTGCTCAGCCCTTCTACATACCAGCCCAGCTCATTTCCTGTTCAACATGAAGTACACAGCTTGGCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395295.2
CDS TCA 72 bp CTAGGGATACCTTCACAAACCATACCCTACACTGGGTaGAGAGCTCCTTCCTTTGGCTCCCAAATCACCACA +
Preference number: 6 (lower is better)
Translates to: LGIPSQTIPYTG*RAPSFGSQITT
Trigger: TGTGGTGATTTGGGAGCCAAAGGAAGGAGCTCTTCACCCAGTGTAGGGTATGGTTTGTGAAGGTATCCCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520283.1
CDS GCA 72 bp TGCAAGAATGGACCCACTGGAGAACTGGAGTGCAGGTaGGAGGATCATAGGGAAGATAGTGTGATGAACAAG +
Preference number: 6 (lower is better)
Translates to: CKNGPTGELECR*EDHREDSVMNK
Trigger: CTTGTTCATCACACTATCTTCCCTATGATCCTCGCACCTGCACTCCAGTTCTCCAGTGGGTCCATTCTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520283.1
CDS CCA 72 bp TTCTCTAGGGATACCTTCACAAACCATACCCTACACTaGGTGAAGAGCTCCTTCCTTTGGCTCCCAAATCAC +
Preference number: 6 (lower is better)
Translates to: FSRDTFTNHTLH*VKSSFLWLPNH
Trigger: GTGATTTGGGAGCCAAAGGAAGGAGCTCTTCACCCAGTGTAGGGTATGGTTTGTGAAGGTATCCCTAGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520283.1
CDS CAA 72 bp CCTGTCTTTCAATGGGATGATCTTCTTGACCTAAAATaGCCATGGCAACCTTGTGGGTGGGGTGGAAGAGGT +
Preference number: 6 (lower is better)
Translates to: PVFQWDDLLDLK*PWQPCGWGGRG
Trigger: ACCTCTTCCACCCCACCCACAAGGTTGCCATGGCAATTTTAGGTCAAGAAGATCATCCCATTGAAAGACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520283.1
CDS TCA 72 bp GATCGACAGTCTGTTCTAGCCCTGGCACTGACCAGCTaGGGATGTTTGGTTCAGAGTCTCAATTACAATCAA +
Preference number: 6 (lower is better)
Translates to: DRQSVLALALTS*GCLVQSLNYNQ
Trigger: TTGATTGTAATTGAGACTCTGAACCAAACATCCTCAGCTGGTCAGTGCCAGGGCTAGAACAGACTGTCGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517849.1
CDS GCA 72 bp GTATCTTCTCATATTCTGAGAGGTTGGAGATTTCCTTaGCTTTGTCCCTTGGACCTTGGAGTGCTGCAGATC +
Preference number: 6 (lower is better)
Translates to: VSSHILRGWRFP*LCPLDLGVLQI
Trigger: GATCTGCAGCACTCCAAGGTCCAAGGGACAAAGGCAAGGAAATCTCCAACCTCTCAGAATATGAGAAGATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520283.1
ENST00000520954.1
CDS CAA 72 bp AGCTTCCTGGCCATATTAAGGTCATCGCCCCAGCTTTaGGCTATGCTCTTGCAAATAAATGTCTCAGGAACC +
Preference number: 6 (lower is better)
Translates to: SFLAILRSSPQL*AMLLQINVSGT
Trigger: GGTTCCTGAGACATTTATTTGCAAGAGCATAGCCAAAAGCTGGGGCGATGACCTTAATATGGCCAGGAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520283.1
CDS TCA 72 bp GAAAGCCAAATTTGCACACCCAACAAGTCTCTTCTGTaGGCTTTAGGGCATCAGTTGGAAAGAGTGGGACAA +
Preference number: 6 (lower is better)
Translates to: ESQICTPNKSLL*ALGHQLERVGQ
Trigger: TTGTCCCACTCTTTCCAACTGATGCCCTAAAGCTCACAGAAGAGACTTGTTGGGTGTGCAAATTTGGCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520283.1
CDS TCA 72 bp GGGCAGTTACTCTCATGCTGTTCTTGTGGTAATGAGTaGGTTCTCATGGGATCTGATGGTTTTATAAGGGGC +
Preference number: 6 (lower is better)
Translates to: GQLLSCCSCGNE*VLMGSDGFIRG
Trigger: GCCCCTTATAAAACCATCAGATCCCATGAGAACTCACTCATTACCACAAGAACAGCATGAGAGTAACTGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520283.1
CDS GCA 72 bp GAACTTGACAAGCTCACCAGGTTCCCACCACTGGGCTaGAGGAACTATAATGTTTTCTTTTGTGTTGACTCA +
Preference number: 6 (lower is better)
Translates to: ELDKLTRFPPLG*RNYNVFFCVDS
Trigger: TGAGTCAACACAAAAGAAAACATTATAGTTCCTGCAGCCCAGTGGTGGGAACCTGGTGAGCTTGTCAAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520283.1
CDS GCA 72 bp GCTCCTATAATTTCACACCTCTTATCTAAGAGAAGGTaGCGGGTGGCTATTGAAGAGCCATGTCTCAAGTAC +
Preference number: 6 (lower is better)
Translates to: APIISHLLSKRR*RVAIEEPCLKY
Trigger: GTACTTGAGACATGGCTCTTCAATAGCCACCCGGCACCTTCTCTTAGATAAGAGGTGTGAAATTATAGGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520283.1
CDS CCA 72 bp AGTGAGAACTTGACAAGCTCACCAGGTTCCCACCACTaGGCTGCAGGAACTATAATGTTTTCTTTTGTGTTG +
Preference number: 6 (lower is better)
Translates to: SENLTSSPGSHH*AAGTIMFSFVL
Trigger: CAACACAAAAGAAAACATTATAGTTCCTGCAGCCCAGTGGTGGGAACCTGGTGAGCTTGTCAAGTTCTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520283.1
CDS CCA 72 bp CTTCTTGACCTAAAATTGCCATGGCAACCTTGTGGGTaGGGTGGAAGAGGTCACTATACAAACAGGTTATCA +
Preference number: 6 (lower is better)
Translates to: LLDLKLPWQPCG*GGRGHYTNRLS
Trigger: TGATAACCTGTTTGTATAGTGACCTCTTCCACCCCACCCACAAGGTTGCCATGGCAATTTTAGGTCAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520283.1
CDS CCA 72 bp TTTCAATGGGATGATCTTCTTGACCTAAAATTGCCATaGCAACCTTGTGGGTGGGGTGGAAGAGGTCACTAT +
Preference number: 6 (lower is better)
Translates to: FQWDDLLDLKLP*QPCGWGGRGHY
Trigger: ATAGTGACCTCTTCCACCCCACCCACAAGGTTGCCATGGCAATTTTAGGTCAAGAAGATCATCCCATTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520283.1
CDS CAA 72 bp TCAGGCTCTGTCAATCAGTCGTCTTCAATCTCTTCTTaGTCACCTACCAATTCTCTTCCTTCAAGCTCAGCC +
Preference number: 6 (lower is better)
Translates to: SGSVNQSSSISS*SPTNSLPSSSA
Trigger: GGCTGAGCTTGAAGGAAGAGAATTGGTAGGTGACAAAGAAGAGATTGAAGACGACTGATTGACAGAGCCTGA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523049.1
CDS CAA 72 bp ATATTAAGGTCATCGCCCCAGCTTTTGGCTATGCTCTaGCAAATAAATGTCTCAGGAACCCTTAAGCCACCC +
Preference number: 6 (lower is better)
Translates to: ILRSSPQLLAML*QINVSGTLKPP
Trigger: GGGTGGCTTAAGGGTTCCTGAGACATTTATTTGCAAGAGCATAGCCAAAAGCTGGGGCGATGACCTTAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520283.1
CDS CAA 90 bp TTAGCATTTCCTGTCTTTCAATGGGATGATCTTCTTGACCTAAAATaGCCATGGCAACCTTGTGGGTGGGGTGGAAGAGGTCACTATACA +
Preference number: 6 (lower is better)
Translates to: LAFPVFQWDDLLDLK*PWQPCGWGGRGHYT
Trigger: TGTATAGTGACCTCTTCCACCCCACCCACAAGGTTGCCATGGCAATTTTAGGTCAAGAAGATCATCCCATTGAAAGACAGGAAATGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520283.1
CDS TCA 72 bp TTCTCATTCCTTACTCAGCAAGGGCTCATTAGCATTTaGCTCAGGCTCTGTCAATCAGTCGTCTTCAATCTC +
Preference number: 6 (lower is better)
Translates to: FSFLTQQGLISI*LRLCQSVVFNL
Trigger: GAGATTGAAGACGACTGATTGACAGAGCCTGAGTCAAATGCTAATGAGCCCTTGCTGAGTAAGGAATGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523049.1
CDS GCA 72 bp CATGATCTTTTTGGCTCATTACCAATAAGATGCGGTTaGGAAGGGAGTGGGGACAGAACCTCCTTATGTATT +
Preference number: 6 (lower is better)
Translates to: HDLFGSLPIRCG*EGSGDRTSLCI
Trigger: AATACATAAGGAGGTTCTGTCCCCACTCCCTTCGCAACCGCATCTTATTGGTAATGAGCCAAAAAGATCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000160713.8
CDS CCA 72 bp GAGGGCTTGGGTCCTCTTGGCTTGTACTGTAAAACCTaGGCCTCTATTTTACTAGGTGCTTTACAAATATCA +
Preference number: 6 (lower is better)
Translates to: EGLGPLGLYCKT*ASILLGALQIS
Trigger: TGATATTTGTAAAGCACCTAGTAAAATAGAGGCCCAGGTTTTACAGTACAAGCCAAGAGGACCCAAGCCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517849.1
CDS CAA 72 bp AGCAGAAAAGGCAGACCTGAAATTTGGAACCAGTTATaGGCTACAGGGCTTTGTAAACTTTGGCCAAGCACT +
Preference number: 6 (lower is better)
Translates to: SRKGRPEIWNQL*ATGLCKLWPST
Trigger: AGTGCTTGGCCAAAGTTTACAAAGCCCTGTAGCCAATAACTGGTTCCAAATTTCAGGTCTGCCTTTTCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520283.1
CDS TCA 72 bp TGTCCAATGTTGAAATGTGAGCAGAAAAGGCAGACCTaGAATTTGGAACCAGTTATTGGCTACAGGGCTTTG +
Preference number: 6 (lower is better)
Translates to: CPMLKCEQKRQT*NLEPVIGYRAL
Trigger: CAAAGCCCTGTAGCCAATAACTGGTTCCAAATTTCAGGTCTGCCTTTTCTGCTCACATTTCAACATTGGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520283.1
CDS CAA 72 bp TTGATTCAAATTCGATCATATGAGTGGACCTCTTCTTaGTCACCTACCAATTCTCTTCCTTCAAGCTCAGCC +
Preference number: 6 (lower is better)
Translates to: LIQIRSYEWTSS*SPTNSLPSSSA
Trigger: GGCTGAGCTTGAAGGAAGAGAATTGGTAGGTGACAAAGAAGAGGTCCACTCATATGATCGAATTTGAATCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520283.1
CDS CAA 90 bp TCTACCGAAAACTCAACCGTTCCTTGTATTTCAGACATGATCTTTTaGGCTCATTACCTCTTCTTTGTCACCTACCAATTCTCTTCCTTC +
Preference number: 6 (lower is better)
Translates to: STENSTVPCISDMIF*AHYLFFVTYQFSSF
Trigger: GAAGGAAGAGAATTGGTAGGTGACAAAGAAGAGGTAATGAGCCAAAAAGATCATGTCTGAAATACAAGGAACGGTTGAGTTTTCGGTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482951.6
ENST00000517849.1
CDS TCA 72 bp GTAGTCAAGGGATACTCCAGTCTCTGTGAATGGGGATaGAGCATTAACATTAACAGAAAGGGAAAGAACTTT +
Preference number: 6 (lower is better)
Translates to: VVKGYSSLCEWG*SININRKGKNF
Trigger: AAAGTTCTTTCCCTTTCTGTTAATGTTAATGCTTCATCCCCATTCACAGAGACTGGAGTATCCCTTGACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520283.1
CDS CAA 90 bp GGGAAGATAAGGCTGAAAATCAGAACTAAAACTTTCTTATGCAGGTaGCAGAATTATGAGGAAAGCCAAATTTGCACACCCAACAAGTCT +
Preference number: 6 (lower is better)
Translates to: GKIRLKIRTKTFLCR*QNYEESQICTPNKS
Trigger: AGACTTGTTGGGTGTGCAAATTTGGCTTTCCTCATAATTCTGCAACCTGCATAAGAAAGTTTTAGTTCTGATTTTCAGCCTTATCTTCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520283.1
CDS TCA 72 bp GACAATGACACTTTGAATGGGGGTGTTTTATTGGATTaGGACCAAACTGGAAATCTTTATCCATCAGCATCA +
Preference number: 6 (lower is better)
Translates to: DNDTLNGGVLLD*DQTGNLYPSAS
Trigger: TGATGCTGATGGATAAAGATTTCCAGTTTGGTCTCAATCCAATAAAACACCCCCATTCAAAGTGTCATTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520283.1
CDS CAA 90 bp CACCTGTTCTCAGAACATCTCTATTTGATTAGTCAAAGAACTTATTaGTGCTTCAATTCGCTCACCTGTAAAAACACCCGAGAGTACAAA +
Preference number: 6 (lower is better)
Translates to: HLFSEHLYLISQRTY*CFNSLTCKNTREYK
Trigger: TTTGTACTCTCGGGTGTTTTTACAGGTGAGCGAATTGAAGCACAAATAAGTTCTTTGACTAATCAAATAGAGATGTTCTGAGAACAGGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520283.1
CDS TCA 72 bp AGAATTTCTGTTTGTTTGCAGATTTCACTCACTACCTaGAACAATGCCTGCAAGTATGTTCTCTTCTTTTGT +
Preference number: 6 (lower is better)
Translates to: RISVCLQISLTT*NNACKYVLFFC
Trigger: ACAAAAGAAGAGAACATACTTGCAGGCATTGTTTCAGGTAGTGAGTGAAATCTGCAAACAAACAGAAATTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520283.1
CDS CAA 72 bp TCAGAACATCTCTATTTGATTAGTCAAAGAACTTATTaGTGCTTCAATTCGCTCACCTGTAAAAACACCCGA +
Preference number: 6 (lower is better)
Translates to: SEHLYLISQRTY*CFNSLTCKNTR
Trigger: TCGGGTGTTTTTACAGGTGAGCGAATTGAAGCACAAATAAGTTCTTTGACTAATCAAATAGAGATGTTCTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520283.1
CDS CCA 72 bp CTCTATTTTACTAGGTGCTTTACAAATATCACCTCATaGACATTTAATAGATTCCTCTCTGAAAGAGATCCA +
Preference number: 6 (lower is better)
Translates to: LYFTRCFTNITS*TFNRFLSERDP
Trigger: TGGATCTCTTTCAGAGAGGAATCTATTAAATGTCCATGAGGTGATATTTGTAAAGCACCTAGTAAAATAGAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517849.1