RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM135A (Homo sapiens)

Ensembl gene IDs: ENSG00000082269

Ensembl transcript IDs: ENST00000194672.11, ENST00000361499.7, ENST00000370479.7, ENST00000393299.6, ENST00000418814.7, ENST00000425415.2, ENST00000457062.6, ENST00000505769.5, ENST00000505868.1, ENST00000507085.5, ENST00000508844.5, ENST00000514185.5, ENST00000515280.5, ENST00000515323.5

Found 472 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTTCCTCTAGATGGTTGTCTTTCTGTGTTCGTAGCTGTTTTCTTCTaGGAAGACGCTCATATAGGAGCTGCATGTTGGCCTTGGCCAGTT +
Preference number: 1 (lower is better)
Translates to: FPLDGCLSVFVAVFF*EDAHIGAACWPWPV
Trigger: AACTGGCCAAGGCCAACATGCAGCTCCTATATGAGCGTCTTCTCAGAAGAAAACAGCTACGAACACAGAAAGACAACCATCTAGAGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000194672.11
3UTR TCA 90 bp TCCATCTTCAGAACCATCCTCTTCTTCTACACTAAAATAAGGTACTaGGGATGCCAGCAGAGGAACTTCACTGTACATGAACCCAGGAAG +
Preference number: 1 (lower is better)
Translates to: SIFRTILFFYTKIRY*GCQQRNFTVHEPRK
Trigger: CTTCCTGGGTTCATGTACAGTGAAGTTCCTCTGCTGGCATCCTCAGTACCTTATTTTAGTGTAGAAGAAGAGGATGGTTCTGAAGATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000194672.11
3UTR TCA 90 bp TATTTCCGAATCAAGAACAGCTATATGTGCAGCTCTCCCAATGAGTaGATCAGCTGTATTGGGCAATGCATTGATGACATTATAGCGAAC +
Preference number: 1 (lower is better)
Translates to: YFRIKNSYMCSSPNE*ISCIGQCIDDIIAN
Trigger: GTTCGCTATAATGTCATCAATGCATTGCCCAATACAGCTGATTCACTCATTGGGAGAGCTGCACATATAGCTGTTCTTGATTCGGAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000194672.11
3UTR GCA 90 bp ACTTCCAGAAACTGTCCCCATAAAGCCATCAAAAGTGAGCAAAGTTaGGCAAGATTCATATTTATAAGTTCTGCCAGTTCATCAGGATTC +
Preference number: 1 (lower is better)
Translates to: TSRNCPHKAIKSEQS*ARFIFISSASSSGF
Trigger: GAATCCTGATGAACTGGCAGAACTTATAAATATGAATCTTGCGCAACTTTGCTCACTTTTGATGGCTTTATGGGGACAGTTTCTGGAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000194672.11
3UTR CCA 90 bp AAATTTACTTTTGGAAGAATATTTAACATTACAAGGAGACTCTCGTaGTGCAGACGGGAAGGACAAACAACCAGAAGTACAGACAGTAGG +
Preference number: 1 (lower is better)
Translates to: KFTFGRIFNITRRLS*CRREGQTTRSTDSR
Trigger: CCTACTGTCTGTACTTCTGGTTGTTTGTCCTTCCCGTCTGCACCACGAGAGTCTCCTTGTAATGTTAAATATTCTTCCAAAAGTAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000194672.11
3UTR CCA 90 bp AATGTAATTGCTGTCCCTGTAGAGTTATTAGATTTATCAGGACTCTaGAAGCCTTTACACATAGTATCCAAGTTAGGTTTGGAGCTGCAA +
Preference number: 1 (lower is better)
Translates to: NVIAVPVELLDLSGL*KPLHIVSKLGLELQ
Trigger: TTGCAGCTCCAAACCTAACTTGGATACTATGTGTAAAGGCTTCCAGAGTCCTGATAAATCTAATAACTCTACAGGGACAGCAATTACATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000194672.11
3UTR TCA 90 bp TTTACTATATCAGTACTGGCTGAAAAAGGATCACTTGTACCCAGATaGGTTTCACTTTCAACTGTAGGGATTTCTGAATACATCTGTGTG +
Preference number: 1 (lower is better)
Translates to: FTISVLAEKGSLVPR*VSLSTVGISEYICV
Trigger: CACACAGATGTATTCAGAAATCCCTACAGTTGAAAGTGAAACTCATCTGGGTACAAGTGATCCTTTTTCAGCCAGTACTGATATAGTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000194672.11
3UTR-3UTR TCA 90 bp ACAGCTATATGTGCAGCTCTCCCAATGAGTGAATCAGCTGTATTGGGCAATGCAAGCTGTGCAATCCCTTaGAGGCTAGCAGCAAAGTGG +
Preference number: 2 (lower is better)
Translates to: TAICAALPMSESAVLGNASCAIP*RLAAKW
Trigger: CCACTTTGCTGCTAGCCTTCAAGGGATTGCACAGCT...TGCATTGCCCAATACAGCTGATTCACTCATTGGGAGAGCTGCACATATAGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000194672.11
3UTR-3UTR TCA 90 bp GTTTCGTTCTTGTCTCTCAGGCTGCAGTGCAACAGCATGATCTTGGCTCACTGCCGGAGACCAGGTTCTTaGCCTAAGTCTGTAATTAAC +
Preference number: 2 (lower is better)
Translates to: VSFLSLRLQCNSMILAHCRRPGS*PKSVIN
Trigger: GTTAATTACAGACTTAGGTCAAGAACCTGGTCTCCG...GCAGTGAGCCAAGATCATGCTGTTGCACTGCAGCCTGAGAGACAAGAACGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505868.1
3UTR-3UTR GCA 90 bp ACTTACAAAAACCTCTGTCTGTCACAATTAGTGAGTGCAAACAGAACTTCTACCCGCTCATATAGGAGCTaGATGTTGGCCTTGGCCAGT +
Preference number: 2 (lower is better)
Translates to: TYKNLCLSQLVSANRTSTRSYRS*MLALAS
Trigger: ACTGGCCAAGGCCAACATGCAGCTCCTATATGAGCG...GGTAGAAGTTCTGTTTGCACTCACTAATTGTGACAGACAGAGGTTTTTGTAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000194672.11
3UTR CAA 90 bp TGCAAGGACCTTGCCCTTGCACAGTTTCAAAGACTAAATCAGTGTTaGGATGTGTCGCAAAAGAACTCGGTTCACTTTCAACACCTGAAT +
Preference number: 2 (lower is better)
Translates to: CKDLALAQFQRLNQC*DVSQKNSVHFQHLN
Trigger: ATTCAGGTGTTGAAAGTGAACCGAGTTCTTTTGCGACACATCCAAACACTGATTTAGTCTTTGAAACTGTGCAAGGGCAAGGTCCTTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000194672.11
3UTR-3UTR TCA 90 bp AAGTGCATTGCTGTAGCTAACAGCACATGTGTCAGAAATATCCGTACTGCTTTGACTAGAAATGGAACCTaGAATGACACAAGGAGTGCC +
Preference number: 2 (lower is better)
Translates to: KCIAVANSTCVRNIRTALTRNGT*NDTRSA
Trigger: GGCACTCCTTGTGTCATTTCAGGTTCCATTTCTAGT...CAAAGCAGTACGGATATTTCTGACACATGTGCTGTTAGCTACAGCAATGCACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000194672.11
3UTR-3UTR GCA 90 bp ATTGCTGTAGCTAACAGCACATGTGTCAGAAATATCCGTACTGCTTTGAGAACCATGAAGTTCCTGGTATaGAATGGCAGCTTCTCTTGG +
Preference number: 2 (lower is better)
Translates to: IAVANSTCVRNIRTALRTMKFLV*NGSFSW
Trigger: CCAAGAGAAGCTGCCATTGCATACCAGGAACTTCAT...GGTTCTCAAAGCAGTACGGATATTTCTGACACATGTGCTGTTAGCTACAGCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000194672.11
3UTR-3UTR GCA 90 bp ATTGCTGTAGCTAACAGCACATGTGTCAGAAATATCCGTACTGCTTTGAGAACCCTATTGCAAGGACCTTaGCCTTGCACAGTTTCAAAG +
Preference number: 2 (lower is better)
Translates to: IAVANSTCVRNIRTALRTLLQGP*PCTVSK
Trigger: CTTTGAAACTGTGCAAGGGCAAGGTCCTTGCAATAG...GGTTCTCAAAGCAGTACGGATATTTCTGACACATGTGCTGTTAGCTACAGCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000194672.11
3UTR CAA 90 bp TCCACAAGTATTTCCTCTTGTCGAAGCTCTGTCCAAGGTCCTAGTTaGACAGTTATATTCTCTCCACTGAAAGGATCTTTATTACTGGGC +
Preference number: 2 (lower is better)
Translates to: STSISSCRSSVQGPS*TVIFSPLKGSLLLG
Trigger: GCCCAGTAATAAAGATCCTTTCAGTGGAGAGAATATAACTGTCAAACTAGGACCTTGGACAGAGCTTCGACAAGAGGAAATACTTGTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000194672.11
3UTR-3UTR TCA 90 bp ATTGCTGTAGCTAACAGCACATGTGTCAGAAATATCCGTACTGCTTTGAGAACCGCCAGTTCTAGTTTCTaGCAAGAAGGAATCTCTTCT +
Preference number: 2 (lower is better)
Translates to: IAVANSTCVRNIRTALRTASSSF*QEGISS
Trigger: AGAAGAGATTCCTTCTTGTCAGAAACTAGAACTGGC...GGTTCTCAAAGCAGTACGGATATTTCTGACACATGTGCTGTTAGCTACAGCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000194672.11
3UTR-3UTR TCA 90 bp AAGTGCATTGCTGTAGCTAACAGCACATGTGTCAGAAATATCCGTACTGCTTTGTCCAAGGTCCTAGTTTaGCAGTTATATTCTCTCCAC +
Preference number: 2 (lower is better)
Translates to: KCIAVANSTCVRNIRTALSKVLV*QLYSLH
Trigger: GTGGAGAGAATATAACTGTCAAACTAGGACCTTGGA...CAAAGCAGTACGGATATTTCTGACACATGTGCTGTTAGCTACAGCAATGCACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000194672.11
3UTR-3UTR TCA 90 bp CCCCAGGCAATCCAAGTTCAATGTAAGTTTTTACTAATCGGAGATCTGCACTGTATTGTCCAAGTTCCCTaGAAATACAACACTCTGCTG +
Preference number: 2 (lower is better)
Translates to: PQAIQVQCKFLLIGDLHCIVQVP*KYNTLL
Trigger: CAGCAGAGTGTTGTATTTTCAGGGAACTTGGACAAT...ACAGTGCAGATCTCCGATTAGTAAAAACTTACATTGAACTTGGATTGCCTGGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000194672.11
3UTR-3UTR TCA 90 bp AAAGCGAGGTACAGCAGAACATATGACAAGGATGACTACAATTGTCAATCCCATAGTATGAACTACTTCTaGGGCAGCAAAATGGAGAGG +
Preference number: 2 (lower is better)
Translates to: KARYSRTYDKDDYNCQSHSMNYF*GSKMER
Trigger: CCTCTCCATTTTGCTGCCTCAGAAGTAGTTCATACT...ATGGGATTGACAATTGTAGTCATCCTTGTCATATGTTCTGCTGTACCTCGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505868.1
3UTR-3UTR GCA 90 bp TTCCTTCTGAGGGCTAAGTGCATTGCTGTAGCTAACAGCACATGTGTCAGAAATATAATCTTTCACTATTaGAAGGACCTTGCCCTTGCA +
Preference number: 2 (lower is better)
Translates to: FLLRAKCIAVANSTCVRNIIFHY*KDLALA
Trigger: TGCAAGGGCAAGGTCCTTGCAATAGTGAAAGATTAT...ATTTCTGACACATGTGCTGTTAGCTACAGCAATGCACTTAGCCCTCAGAAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000194672.11
3UTR-3UTR CCA 90 bp ACAGCTATATGTGCAGCTCTCCCAATGAGTGAATCAGCTGTATTGGGCAATGCAGATTTATCAGGACTCTaGAAGCCTTTACACATAGTA +
Preference number: 2 (lower is better)
Translates to: TAICAALPMSESAVLGNADLSGL*KPLHIV
Trigger: TACTATGTGTAAAGGCTTCCAGAGTCCTGATAAATC...TGCATTGCCCAATACAGCTGATTCACTCATTGGGAGAGCTGCACATATAGCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000194672.11
3UTR-3UTR TCA 90 bp TTCCTTCTGAGGGCTAAGTGCATTGCTGTAGCTAACAGCACATGTGTCAGAAATAACTGTAGGGATTTCTaGATACATCTGTGTGAGATT +
Preference number: 2 (lower is better)
Translates to: FLLRAKCIAVANSTCVRNNCRDF*IHLCEI
Trigger: AATCTCACACAGATGTATTCAGAAATCCCTACAGTT...ATTTCTGACACATGTGCTGTTAGCTACAGCAATGCACTTAGCCCTCAGAAGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000194672.11
3UTR-3UTR CCA 90 bp TCAGAAAATCTGCGTACCCTCAAAGTATGGTGCTCTTGTGCTAATAATATTCTTATAGGAGCTGCATGTTaGCCTTGGCCAGTTCTAGTT +
Preference number: 2 (lower is better)
Translates to: SENLRTLKVWCSCANNILIGAAC*PWPVLV
Trigger: AACTAGAACTGGCCAAGGCCAACATGCAGCTCCTAT...AAGAATATTATTAGCACAAGAGCACCATACTTTGAGGGTACGCAGATTTTCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000194672.11
3UTR-3UTR GCA 90 bp TTCCTTCTGAGGGCTAAGTGCATTGCTGTAGCTAACAGCACATGTGTCAGAAATACCCTCAAAGTATGGTaGTCTTGTGCTAATAATATT +
Preference number: 2 (lower is better)
Translates to: FLLRAKCIAVANSTCVRNTLKVW*SCANNI
Trigger: AATATTATTAGCACAAGAGCACCATACTTTGAGGGT...ATTTCTGACACATGTGCTGTTAGCTACAGCAATGCACTTAGCCCTCAGAAGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000194672.11
3UTR-3UTR TCA 90 bp CAGCACATGTGTCAGAAATATCCGTACTGCTTTGAGAACCAAAATAATTTTCCAAAATGGAACCTGAAATaGCACAAGGAGTGCCTAAAC +
Preference number: 2 (lower is better)
Translates to: QHMCQKYPYCFENQNNFPKWNLK*HKECLN
Trigger: GTTTAGGCACTCCTTGTGTCATTTCAGGTTCCATTT...TGGAAAATTATTTTGGTTCTCAAAGCAGTACGGATATTTCTGACACATGTGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000194672.11
3UTR-3UTR CCA 90 bp ATTGCTGTAGCTAACAGCACATGTGTCAGAAATATCCGTACTGCTTTGAGAACCCTAAGGACTCAAAGTTaGGTAGTAAATTATCCACAA +
Preference number: 2 (lower is better)
Translates to: IAVANSTCVRNIRTALRTLRTQS*VVNYPQ
Trigger: TTGTGGATAATTTACTACCCAACTTTGAGTCCTTAG...GGTTCTCAAAGCAGTACGGATATTTCTGACACATGTGCTGTTAGCTACAGCAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000194672.11
3UTR CAA 90 bp ATTGCTGTAGCTAACAGCACATGTGTCAGAAATATCCGTACTGCTTaGAGAACCAAAATAATTTTCCACAAGCCCTTGCTTTACTATATC +
Preference number: 2 (lower is better)
Translates to: IAVANSTCVRNIRTA*RTKIIFHKPLLYYI
Trigger: GATATAGTAAAGCAAGGGCTTGTGGAAAATTATTTTGGTTCTCAAAGCAGTACGGATATTTCTGACACATGTGCTGTTAGCTACAGCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000194672.11
3UTR-3UTR GCA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTATGCCTCAGAAAATCTaGGTACCCTCAAAGTATGGT +
Preference number: 2 (lower is better)
Translates to: SNIQKSLSAANMYRNISSMPQKI*VPSKYG
Trigger: ACCATACTTTGAGGGTACGCAGATTTTCTGAGGCAT...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000194672.11
3UTR-3UTR CCA 90 bp TCAGAAAATCTGCGTACCCTCAAAGTATGGTGCTCTTGTGCTAATAATATTCTTAGGCTAGCAGCAAAGTaGCACAAAGTGTATAATGAA +
Preference number: 2 (lower is better)
Translates to: SENLRTLKVWCSCANNILRLAAK*HKVYNE
Trigger: TTCATTATACACTTTGTGCCACTTTGCTGCTAGCCT...AAGAATATTATTAGCACAAGAGCACCATACTTTGAGGGTACGCAGATTTTCTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000194672.11
3UTR-3UTR CCA 90 bp TCAGAAAATCTGCGTACCCTCAAAGTATGGTGCTCTTGTGCTAATAATATTCTTTCCATTTCCTCTAGATaGTTGTCTTTCTGTGTTCGT +
Preference number: 2 (lower is better)
Translates to: SENLRTLKVWCSCANNILSISSR*LSFCVR
Trigger: ACGAACACAGAAAGACAACCATCTAGAGGAAATGGA...AAGAATATTATTAGCACAAGAGCACCATACTTTGAGGGTACGCAGATTTTCTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000194672.11
3UTR-3UTR CCA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGCGTACCCTCAAAGTATaGTGCTCTTGTGCTAATAAT +
Preference number: 2 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMRTLKV*CSCANN
Trigger: ATTATTAGCACAAGAGCACCATACTTTGAGGGTACG...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000194672.11
3UTR CAA 90 bp GTCTTTCTTCCATTAGTTCATCTCTGCTTGTATAGTGAGCATTTATaGTTCCATCCAAAGCTGAATAATCTGTTTCTTCATAGTACCCAT +
Preference number: 2 (lower is better)
Translates to: VFLPLVHLCLYSEHL*FHPKLNNLFLHSTH
Trigger: ATGGGTACTATGAAGAAACAGATTATTCAGCTTTGGATGGAACAATAAATGCTCACTATACAAGCAGAGATGAACTAATGGAAGAAAGAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000194672.11
3UTR-3UTR GCA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTCATATTTATAAGTTCTaGCAGTTCATCAGGATTCTC +
Preference number: 2 (lower is better)
Translates to: SNIQKSLSAANMYRNISSHIYKF*QFIRIL
Trigger: GAGAATCCTGATGAACTGGCAGAACTTATAAATATG...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000194672.11
3UTR-3UTR CAA 90 bp GGGCTAAGCCACTTAGTATCTCTGGGCTTTAGTTATAAAATGAGTAAACAGGACTCCTTGCTGCCACCTTaGCGTAAAAGCGAGGTACAG +
Preference number: 3 (lower is better)
Translates to: GLSHLVSLGFSYKMSKQDSLLPP*RKSEVQ
Trigger: CTGTACCTCGCTTTTACGCAAAGGTGGCAGCAAGGA...GTCCTGTTTACTCATTTTATAACTAAAGCCCAGAGATACTAAGTGGCTTAGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505868.1
3UTR TCA 72 bp GATGGTTGTCTTTCTGTGTTCGTAGCTGTTTTCTTCTaGGAAGACGCTCATATAGGAGCTGCATGTTGGCCT +
Preference number: 3 (lower is better)
Translates to: DGCLSVFVAVFF*EDAHIGAACWP
Trigger: AGGCCAACATGCAGCTCCTATATGAGCGTCTTCTCAGAAGAAAACAGCTACGAACACAGAAAGACAACCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000194672.11
3UTR-3UTR CAA 90 bp ACAGCTATATGTGCAGCTCTCCCAATGAGTGAATCAGCTGTATTGGGCAATGCAAATAATCTTTCACTATaGCAAGGACCTTGCCCTTGC +
Preference number: 3 (lower is better)
Translates to: TAICAALPMSESAVLGNANNLSL*QGPCPC
Trigger: GCAAGGGCAAGGTCCTTGCAATAGTGAAAGATTATT...TGCATTGCCCAATACAGCTGATTCACTCATTGGGAGAGCTGCACATATAGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000194672.11
3UTR-3UTR CAA 90 bp GGGCTAAGCCACTTAGTATCTCTGGGCTTTAGTTATAAAATGAGTAAACAGGACAAGAGGGGCAAATCCTaGCTGCCACCTTTGCGTAAA +
Preference number: 3 (lower is better)
Translates to: GLSHLVSLGFSYKMSKQDKRGKS*LPPLRK
Trigger: TTTACGCAAAGGTGGCAGCAAGGATTTGCCCCTCTT...GTCCTGTTTACTCATTTTATAACTAAAGCCCAGAGATACTAAGTGGCTTAGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505868.1
3UTR-3UTR CAA 90 bp AAGTGCATTGCTGTAGCTAACAGCACATGTGTCAGAAATATCCGTACTGCTTTGGGAATCACGGAATCTTaGTTTTGTGCTGGTGCATTT +
Preference number: 3 (lower is better)
Translates to: KCIAVANSTCVRNIRTALGITES*FCAGAF
Trigger: AAATGCACCAGCACAAAACAAAGATTCCGTGATTCC...CAAAGCAGTACGGATATTTCTGACACATGTGCTGTTAGCTACAGCAATGCACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000194672.11
3UTR-3UTR CAA 90 bp TCAGAAAATCTGCGTACCCTCAAAGTATGGTGCTCTTGTGCTAATAATATTCTTTATAGGAGCTGCATGTaGGCCTTGGCCAGTTCTAGT +
Preference number: 3 (lower is better)
Translates to: SENLRTLKVWCSCANNILYRSCM*ALASSS
Trigger: ACTAGAACTGGCCAAGGCCAACATGCAGCTCCTATA...AAGAATATTATTAGCACAAGAGCACCATACTTTGAGGGTACGCAGATTTTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000194672.11
3UTR-3UTR CAA 90 bp ACAGCTATATGTGCAGCTCTCCCAATGAGTGAATCAGCTGTATTGGGCAATGCAATTGCTACAGTTTCATaGTCCAAGTTCCCTGAAAAT +
Preference number: 3 (lower is better)
Translates to: TAICAALPMSESAVLGNAIATVS*SKFPEN
Trigger: ATTTTCAGGGAACTTGGACAATGAAACTGTAGCAAT...TGCATTGCCCAATACAGCTGATTCACTCATTGGGAGAGCTGCACATATAGCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000194672.11
3UTR TCA 72 bp ATCAAGAACAGCTATATGTGCAGCTCTCCCAATGAGTaGATCAGCTGTATTGGGCAATGCATTGATGACATT +
Preference number: 3 (lower is better)
Translates to: IKNSYMCSSPNE*ISCIGQCIDDI
Trigger: AATGTCATCAATGCATTGCCCAATACAGCTGATTCACTCATTGGGAGAGCTGCACATATAGCTGTTCTTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000194672.11
3UTR-3UTR CAA 90 bp ATTGCTGTAGCTAACAGCACATGTGTCAGAAATATCCGTACTGCTTTGAGAACCCTTCTGGATGCCAGATaGTGTTCCATTTGTGTAATT +
Preference number: 3 (lower is better)
Translates to: IAVANSTCVRNIRTALRTLLDAR*CSICVI
Trigger: AATTACACAAATGGAACACAATCTGGCATCCAGAAG...GGTTCTCAAAGCAGTACGGATATTTCTGACACATGTGCTGTTAGCTACAGCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000194672.11
3UTR-3UTR CAA 90 bp TATCAGTACTGGCTGAAAAAGGATCACTTGTACCCAGATGAGTTTCACTTTCAAGTCCAAGGTCCTAGTTaGACAGTTATATTCTCTCCA +
Preference number: 3 (lower is better)
Translates to: YQYWLKKDHLYPDEFHFQVQGPS*TVIFSP
Trigger: TGGAGAGAATATAACTGTCAAACTAGGACCTTGGAC...TTGAAAGTGAAACTCATCTGGGTACAAGTGATCCTTTTTCAGCCAGTACTGATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000194672.11
3UTR-3UTR CAA 90 bp ATTGCTGTAGCTAACAGCACATGTGTCAGAAATATCCGTACTGCTTTGAGAACCATTTTCCACAAGCCCTaGCTTTACTATATCAGTACT +
Preference number: 3 (lower is better)
Translates to: IAVANSTCVRNIRTALRTIFHKP*LYYIST
Trigger: AGTACTGATATAGTAAAGCAAGGGCTTGTGGAAAAT...GGTTCTCAAAGCAGTACGGATATTTCTGACACATGTGCTGTTAGCTACAGCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000194672.11
3UTR-3UTR CAA 90 bp GGGCTAAGCCACTTAGTATCTCTGGGCTTTAGTTATAAAATGAGTAAACAGGACGAAAGTATTACTTCATaGGTAAAGGCAGTTCACGTG +
Preference number: 3 (lower is better)
Translates to: GLSHLVSLGFSYKMSKQDESITS*VKAVHV
Trigger: CACGTGAACTGCCTTTACCAATGAAGTAATACTTTC...GTCCTGTTTACTCATTTTATAACTAAAGCCCAGAGATACTAAGTGGCTTAGCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505868.1
3UTR TCA 72 bp TCAGTACTGGCTGAAAAAGGATCACTTGTACCCAGATaGGTTTCACTTTCAACTGTAGGGATTTCTGAATAC +
Preference number: 3 (lower is better)
Translates to: SVLAEKGSLVPR*VSLSTVGISEY
Trigger: GTATTCAGAAATCCCTACAGTTGAAAGTGAAACTCATCTGGGTACAAGTGATCCTTTTTCAGCCAGTACTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000194672.11
3UTR GCA 72 bp GGAAATAATCTTTCACTATTGCAAGGACCTTGCCCTTaGACAGTTTCAAAGACTAAATCAGTGTTTGGATGT +
Preference number: 3 (lower is better)
Translates to: GNNLSLLQGPCP*TVSKTKSVFGC
Trigger: ACATCCAAACACTGATTTAGTCTTTGAAACTGTGCAAGGGCAAGGTCCTTGCAATAGTGAAAGATTATTTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000194672.11
3UTR-3UTR CAA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTCAGAAGGAAGTATTTTaGATAGCGGTGCACATCTGT +
Preference number: 3 (lower is better)
Translates to: SNIQKSLSAANMYRNISSQKEVF*IAVHIC
Trigger: ACAGATGTGCACCGCTATCAAAAATACTTCCTTCTG...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000194672.11
3UTR GCA 72 bp TACTTACAAAAACCTCTGTCTGTCACAATTAGTGAGTaGAAACAGAACTTCTACCCAACCTTAGTGCATTTT +
Preference number: 3 (lower is better)
Translates to: YLQKPLSVTISE*KQNFYPTLVHF
Trigger: AAAATGCACTAAGGTTGGGTAGAAGTTCTGTTTGCACTCACTAATTGTGACAGACAGAGGTTTTTGTAAGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000194672.11
ENST00000370479.7
ENST00000418814.7
3UTR-3UTR CAA 90 bp CAGCACATGTGTCAGAAATATCCGTACTGCTTTGAGAACCAAAATAATTTTCCATCTAAGGACTCAAAGTaGGGTAGTAAATTATCCACA +
Preference number: 3 (lower is better)
Translates to: QHMCQKYPYCFENQNNFPSKDSK*GSKLST
Trigger: TGTGGATAATTTACTACCCAACTTTGAGTCCTTAGA...TGGAAAATTATTTTGGTTCTCAAAGCAGTACGGATATTTCTGACACATGTGCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS-3UTR GCA 90 bp GTTTCGTTCTTGTCTCTCAGGCTGCAGTGCAACAGCATGATCTTGGCTCACTGCCCTTGCTGCCACCTTTaGGTAAAAGCGAGGTACAGC +
Preference number: 4 (lower is better)
Translates to: VSFLSLRLQCNSMILAHCPCCHL*VKARYS
Trigger: GCTGTACCTCGCTTTTACGCAAAGGTGGCAGCAAGG...GCAGTGAGCCAAGATCATGCTGTTGCACTGCAGCCTGAGAGACAAGAACGAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR TCA 90 bp TGCCACCTTTGCGTAAAAGCGAGGTACAGCAGAACATATGACAAGGATGACTACTGGCGAGGGTCTGAGTaGTCTCGACATGTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: CHLCVKARYSRTYDKDDYWRGSE*SRHVSC
Trigger: GCAGCTGACATGTCGAGATCACTCAGACCCTCGCCA...GTAGTCATCCTTGTCATATGTTCTGCTGTACCTCGCTTTTACGCAAAGGTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR GCA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTCGCGGCCAGCGAGCATaGGCAGTCGCCCCAGTCCCG +
Preference number: 4 (lower is better)
Translates to: SNIQKSLSAANMYRNISSRGQRA*AVAPVP
Trigger: CGGGACTGGGGCGACTGCGCATGCTCGCTGGCCGCG...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505769.5
CDS-3UTR GCA 90 bp GTTTCGTTCTTGTCTCTCAGGCTGCAGTGCAACAGCATGATCTTGGCTCACTGCCTATGGGGGCTAAAGTaGAGCTTCAATGTTCGGCTA +
Preference number: 4 (lower is better)
Translates to: VSFLSLRLQCNSMILAHCLWGLK*SFNVRL
Trigger: TAGCCGAACATTGAAGCTGCACTTTAGCCCCCATAG...GCAGTGAGCCAAGATCATGCTGTTGCACTGCAGCCTGAGAGACAAGAACGAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR GCA 90 bp TCAGTAAAGAGGGGCAAATCCTTGCTGCCACCTTTGCGTAAAAGCGAGGTACAGAGAGGGGCAAATCCTTaGTGCCACCTTTGCGTAAAA +
Preference number: 4 (lower is better)
Translates to: SVKRGKSLLPPLRKSEVQRGANP*CHLCVK
Trigger: TTTTACGCAAAGGTGGCAGCAAGGATTTGCCCCTCT...CTGTACCTCGCTTTTACGCAAAGGTGGCAGCAAGGATTTGCCCCTCTTTACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR TCA 90 bp TTCGTTCTTGTCTCTCAGGCTGCAGTGCAACAGCATGATCTTGGCTCACTGCAAAGAATTTTCATCAGGTaGCAGTTCATCATCGGAGGG +
Preference number: 4 (lower is better)
Translates to: FVLVSQAAVQQHDLGSLQRIFIR*QFIIGG
Trigger: CCCTCCGATGATGAACTGTCACCTGATGAAAATTCT...TTGCAGTGAGCCAAGATCATGCTGTTGCACTGCAGCCTGAGAGACAAGAACGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR GCA 90 bp GTTTCGTTCTTGTCTCTCAGGCTGCAGTGCAACAGCATGATCTTGGCTCACTGCATGCCTCAGAAAATCTaGGTACCCTCAAAGTATGGT +
Preference number: 4 (lower is better)
Translates to: VSFLSLRLQCNSMILAHCMPQKI*VPSKYG
Trigger: ACCATACTTTGAGGGTACGCAGATTTTCTGAGGCAT...GCAGTGAGCCAAGATCATGCTGTTGCACTGCAGCCTGAGAGACAAGAACGAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR GCA 90 bp GTTTCGTTCTTGTCTCTCAGGCTGCAGTGCAACAGCATGATCTTGGCTCACTGCTCTCGACATGTCAGCTaGAAAAGCGAACCTGATTTT +
Preference number: 4 (lower is better)
Translates to: VSFLSLRLQCNSMILAHCSRHVS*KSEPDF
Trigger: AAAATCAGGTTCGCTTTTGCAGCTGACATGTCGAGA...GCAGTGAGCCAAGATCATGCTGTTGCACTGCAGCCTGAGAGACAAGAACGAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR GCA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGCCAGCCGGCTATACCTaGGATCAACAGGTCCCCGGC +
Preference number: 4 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMPAGYT*DQQVPG
Trigger: GCCGGGGACCTGTTGATCGCAGGTATAGCCGGCTGG...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505769.5
CDS-3UTR CCA 90 bp TTCGTTCTTGTCTCTCAGGCTGCAGTGCAACAGCATGATCTTGGCTCACTGCAATCTGACTTTCAACTCTaGGCTAGAAAGTCCTGCTAC +
Preference number: 4 (lower is better)
Translates to: FVLVSQAAVQQHDLGSLQSDFQL*ARKSCY
Trigger: GTAGCAGGACTTTCTAGCCCAGAGTTGAAAGTCAGA...TTGCAGTGAGCCAAGATCATGCTGTTGCACTGCAGCCTGAGAGACAAGAACGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR TCA 90 bp TCAGTAAAGAGGGGCAAATCCTTGCTGCCACCTTTGCGTAAAAGCGAGGTACAGATTGTCCAAGTTCCCTaGAAATACAACACTCTGCTG +
Preference number: 4 (lower is better)
Translates to: SVKRGKSLLPPLRKSEVQIVQVP*KYNTLL
Trigger: CAGCAGAGTGTTGTATTTTCAGGGAACTTGGACAAT...CTGTACCTCGCTTTTACGCAAAGGTGGCAGCAAGGATTTGCCCCTCTTTACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR TCA 90 bp TATCAGTACTGGCTGAAAAAGGATCACTTGTACCCAGATGAGTTTCACTTTCAATGGCGAGGGTCTGAGTaGTCTCGACATGTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: YQYWLKKDHLYPDEFHFQWRGSE*SRHVSC
Trigger: GCAGCTGACATGTCGAGATCACTCAGACCCTCGCCA...TTGAAAGTGAAACTCATCTGGGTACAAGTGATCCTTTTTCAGCCAGTACTGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS-3UTR GCA 90 bp GTTTCGTTCTTGTCTCTCAGGCTGCAGTGCAACAGCATGATCTTGGCTCACTGCGTCATACCTGTTGCATaGAACAAACTAGCTTCTACT +
Preference number: 4 (lower is better)
Translates to: VSFLSLRLQCNSMILAHCVIPVA*NKLAST
Trigger: AGTAGAAGCTAGTTTGTTGCATGCAACAGGTATGAC...GCAGTGAGCCAAGATCATGCTGTTGCACTGCAGCCTGAGAGACAAGAACGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR GCA 90 bp TGCCACCTTTGCGTAAAAGCGAGGTACAGCAGAACATATGACAAGGATGACTACCTTCTGAGGGCTAAGTaGATTGCTGTAGCTAACAGC +
Preference number: 4 (lower is better)
Translates to: CHLCVKARYSRTYDKDDYLLRAK*IAVANS
Trigger: GCTGTTAGCTACAGCAATGCACTTAGCCCTCAGAAG...GTAGTCATCCTTGTCATATGTTCTGCTGTACCTCGCTTTTACGCAAAGGTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR GCA 90 bp GTTTCGTTCTTGTCTCTCAGGCTGCAGTGCAACAGCATGATCTTGGCTCACTGCCTTCAGTTCTTCTTTTaGCTGAAGGAAGGCTTGTAT +
Preference number: 4 (lower is better)
Translates to: VSFLSLRLQCNSMILAHCLQFFF*LKEGLY
Trigger: ATACAAGCCTTCCTTCAGGCAAAAGAAGAACTGAAG...GCAGTGAGCCAAGATCATGCTGTTGCACTGCAGCCTGAGAGACAAGAACGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR GCA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGAGCTCGTTGTCCAGCTaGAAGAAGACGGCCCGACCC +
Preference number: 4 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMSSLSS*KKTARP
Trigger: GGGTCGGGCCGTCTTCTTGCAGCTGGACAACGAGCT...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361499.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR CCA 90 bp CCCCAGGCAATCCAAGTTCAATGTAAGTTTTTACTAATCGGAGATCTGCACTGTACAAGGAGACTCTCGTaGTGCAGACGGGAAGGACAA +
Preference number: 4 (lower is better)
Translates to: PQAIQVQCKFLLIGDLHCTRRLS*CRREGQ
Trigger: TTGTCCTTCCCGTCTGCACCACGAGAGTCTCCTTGT...ACAGTGCAGATCTCCGATTAGTAAAAACTTACATTGAACTTGGATTGCCTGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS-3UTR CCA 90 bp TTCGTTCTTGTCTCTCAGGCTGCAGTGCAACAGCATGATCTTGGCTCACTGCAAGTAAGAAGTACTGCTTaGCTGCTTTGTAATGGCATC +
Preference number: 4 (lower is better)
Translates to: FVLVSQAAVQQHDLGSLQVRSTA*LLCNGI
Trigger: GATGCCATTACAAAGCAGCCAAGCAGTACTTCTTAC...TTGCAGTGAGCCAAGATCATGCTGTTGCACTGCAGCCTGAGAGACAAGAACGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR TCA 90 bp GGGCTAAGCCACTTAGTATCTCTGGGCTTTAGTTATAAAATGAGTAAACAGGACAGCTGTGCAATCCCTTaGAGGCTAGCAGCAAAGTGG +
Preference number: 4 (lower is better)
Translates to: GLSHLVSLGFSYKMSKQDSCAIP*RLAAKW
Trigger: CCACTTTGCTGCTAGCCTTCAAGGGATTGCACAGCT...GTCCTGTTTACTCATTTTATAACTAAAGCCCAGAGATACTAAGTGGCTTAGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR TCA 90 bp TGCCACCTTTGCGTAAAAGCGAGGTACAGCAGAACATATGACAAGGATGACTACACTAGAAATGGAACCTaGAATGACACAAGGAGTGCC +
Preference number: 4 (lower is better)
Translates to: CHLCVKARYSRTYDKDDYTRNGT*NDTRSA
Trigger: GGCACTCCTTGTGTCATTTCAGGTTCCATTTCTAGT...GTAGTCATCCTTGTCATATGTTCTGCTGTACCTCGCTTTTACGCAAAGGTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR TCA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGTGGCGAGGGTCTGAGTaGTCTCGACATGTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMWRGSE*SRHVSC
Trigger: GCAGCTGACATGTCGAGATCACTCAGACCCTCGCCA...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR TCA 90 bp GTTTCGTTCTTGTCTCTCAGGCTGCAGTGCAACAGCATGATCTTGGCTCACTGCCATTTTACTGGACTCTaGTCTCTGAAGATTCTGAAT +
Preference number: 4 (lower is better)
Translates to: VSFLSLRLQCNSMILAHCHFTGL*SLKILN
Trigger: ATTCAGAATCTTCAGAGATCAGAGTCCAGTAAAATG...GCAGTGAGCCAAGATCATGCTGTTGCACTGCAGCCTGAGAGACAAGAACGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR TCA 90 bp TGCCACCTTTGCGTAAAAGCGAGGTACAGCAGAACATATGACAAGGATGACTACAGTATGAACTACTTCTaGGGCAGCAAAATGGAGAGG +
Preference number: 4 (lower is better)
Translates to: CHLCVKARYSRTYDKDDYSMNYF*GSKMER
Trigger: CCTCTCCATTTTGCTGCCTCAGAAGTAGTTCATACT...GTAGTCATCCTTGTCATATGTTCTGCTGTACCTCGCTTTTACGCAAAGGTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR GCA 90 bp TGCCACCTTTGCGTAAAAGCGAGGTACAGCAGAACATATGACAAGGATGACTACCTATTGCAAGGACCTTaGCCTTGCACAGTTTCAAAG +
Preference number: 4 (lower is better)
Translates to: CHLCVKARYSRTYDKDDYLLQGP*PCTVSK
Trigger: CTTTGAAACTGTGCAAGGGCAAGGTCCTTGCAATAG...GTAGTCATCCTTGTCATATGTTCTGCTGTACCTCGCTTTTACGCAAAGGTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR GCA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAGCTCGTTGTCCAGCTaGAAGAAGACGGCCCGACCC +
Preference number: 4 (lower is better)
Translates to: SNIQKSLSAANMYRNISSSSLSS*KKTARP
Trigger: GGGTCGGGCCGTCTTCTTGCAGCTGGACAACGAGCT...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361499.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR GCA 90 bp TCAGTAAAGAGGGGCAAATCCTTGCTGCCACCTTTGCGTAAAAGCGAGGTACAGCGGCTACTTATTAGTTaGAAGGCATTCAGATCATCT +
Preference number: 4 (lower is better)
Translates to: SVKRGKSLLPPLRKSEVQRLLIS*KAFRSS
Trigger: AGATGATCTGAATGCCTTGCAACTAATAAGTAGCCG...CTGTACCTCGCTTTTACGCAAAGGTGGCAGCAAGGATTTGCCCCTCTTTACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR GCA 90 bp TGCCACCTTTGCGTAAAAGCGAGGTACAGCAGAACATATGACAAGGATGACTACTGGGCTAGAAAGTCCTaGTACAGAGCTTTCTTCAGT +
Preference number: 4 (lower is better)
Translates to: CHLCVKARYSRTYDKDDYWARKS*YRAFFS
Trigger: ACTGAAGAAAGCTCTGTAGCAGGACTTTCTAGCCCA...GTAGTCATCCTTGTCATATGTTCTGCTGTACCTCGCTTTTACGCAAAGGTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR GCA 90 bp AAAGCGAGGTACAGCAGAACATATGACAAGGATGACTACAATTGTCAATCCCATGGGGCAAATCCTTGCTaGCACCTTTGCGTAAAAGCG +
Preference number: 4 (lower is better)
Translates to: KARYSRTYDKDDYNCQSHGANPC*HLCVKA
Trigger: CGCTTTTACGCAAAGGTGGCAGCAAGGATTTGCCCC...ATGGGATTGACAATTGTAGTCATCCTTGTCATATGTTCTGCTGTACCTCGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR CCA 90 bp GGGCTAAGCCACTTAGTATCTCTGGGCTTTAGTTATAAAATGAGTAAACAGGACACAAGGAGACTCTCGTaGTGCAGACGGGAAGGACAA +
Preference number: 4 (lower is better)
Translates to: GLSHLVSLGFSYKMSKQDTRRLS*CRREGQ
Trigger: TTGTCCTTCCCGTCTGCACCACGAGAGTCTCCTTGT...GTCCTGTTTACTCATTTTATAACTAAAGCCCAGAGATACTAAGTGGCTTAGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR CCA 90 bp TTCGTTCTTGTCTCTCAGGCTGCAGTGCAACAGCATGATCTTGGCTCACTGCAATCTCTCTGTATTAGTTaGCAAACAGCTAGCTTCCTT +
Preference number: 4 (lower is better)
Translates to: FVLVSQAAVQQHDLGSLQSLCIS*QTASFL
Trigger: AAGGAAGCTAGCTGTTTGCCAACTAATACAGAGAGA...TTGCAGTGAGCCAAGATCATGCTGTTGCACTGCAGCCTGAGAGACAAGAACGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR CCA 90 bp TCAGTAAAGAGGGGCAAATCCTTGCTGCCACCTTTGCGTAAAAGCGAGGTACAGACTCAAGTTTCCTTCTaGCTCCAAATGGCTATACTT +
Preference number: 4 (lower is better)
Translates to: SVKRGKSLLPPLRKSEVQTQVSF*LQMAIL
Trigger: AAGTATAGCCATTTGGAGCCAGAAGGAAACTTGAGT...CTGTACCTCGCTTTTACGCAAAGGTGGCAGCAAGGATTTGCCCCTCTTTACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR TCA 90 bp TTCGTTCTTGTCTCTCAGGCTGCAGTGCAACAGCATGATCTTGGCTCACTGCAAAATAATCTCCATCTGTaGAGTGTAGATCCAAGGATA +
Preference number: 4 (lower is better)
Translates to: FVLVSQAAVQQHDLGSLQNNLHL*SVDPRI
Trigger: TATCCTTGGATCTACACTTCACAGATGGAGATTATT...TTGCAGTGAGCCAAGATCATGCTGTTGCACTGCAGCCTGAGAGACAAGAACGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR TCA 90 bp ACTTACAAAAACCTCTGTCTGTCACAATTAGTGAGTGCAAACAGAACTTCTACCAGCTGTGCAATCCCTTaGAGGCTAGCAGCAAAGTGG +
Preference number: 4 (lower is better)
Translates to: TYKNLCLSQLVSANRTSTSCAIP*RLAAKW
Trigger: CCACTTTGCTGCTAGCCTTCAAGGGATTGCACAGCT...GGTAGAAGTTCTGTTTGCACTCACTAATTGTGACAGACAGAGGTTTTTGTAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000194672.11
ENST00000370479.7
ENST00000418814.7
CDS-3UTR TCA 90 bp ACAGCTATATGTGCAGCTCTCCCAATGAGTGAATCAGCTGTATTGGGCAATGCAGCCAGTTCTAGTTTCTaGCAAGAAGGAATCTCTTCT +
Preference number: 4 (lower is better)
Translates to: TAICAALPMSESAVLGNAASSSF*QEGISS
Trigger: AGAAGAGATTCCTTCTTGTCAGAAACTAGAACTGGC...TGCATTGCCCAATACAGCTGATTCACTCATTGGGAGAGCTGCACATATAGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS-3UTR TCA 90 bp TCAGTAAAGAGGGGCAAATCCTTGCTGCCACCTTTGCGTAAAAGCGAGGTACAGAACTGTAGGGATTTCTaGATACATCTGTGTGAGATT +
Preference number: 4 (lower is better)
Translates to: SVKRGKSLLPPLRKSEVQNCRDF*IHLCEI
Trigger: AATCTCACACAGATGTATTCAGAAATCCCTACAGTT...CTGTACCTCGCTTTTACGCAAAGGTGGCAGCAAGGATTTGCCCCTCTTTACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR TCA 90 bp TCTGGATGCCAGATTGTGTTCCATTTGTGTAATTTCACTATCGTCCTGGGAGATTCAGAAGTTTCCTTCTaGGGGCTAAGTGCATTGCTG +
Preference number: 4 (lower is better)
Translates to: SGCQIVFHLCNFTIVLGDSEVSF*GLSALL
Trigger: CAGCAATGCACTTAGCCCTCAGAAGGAAACTTCTGA...ATCTCCCAGGACGATAGTGAAATTACACAAATGGAACACAATCTGGCATCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS-3UTR TCA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTTGGCGAGGGTCTGAGTaGTCTCGACATGTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SNIQKSLSAANMYRNISSWRGSE*SRHVSC
Trigger: GCAGCTGACATGTCGAGATCACTCAGACCCTCGCCA...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR TCA 90 bp ACTTACAAAAACCTCTGTCTGTCACAATTAGTGAGTGCAAACAGAACTTCTACCAGTTTGGCGAGGGTCTaGGTGATCTCGACATGTCAG +
Preference number: 4 (lower is better)
Translates to: TYKNLCLSQLVSANRTSTSLARV*VISTCQ
Trigger: CTGACATGTCGAGATCACTCAGACCCTCGCCAAACT...GGTAGAAGTTCTGTTTGCACTCACTAATTGTGACAGACAGAGGTTTTTGTAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000194672.11
ENST00000370479.7
ENST00000418814.7
CDS-3UTR GCA 90 bp GCAAAGTTGCGCAAGATTCATATTTATAAGTTCTGCCAGTTCATCAGGATTCTCCGCTCATATAGGAGCTaGATGTTGGCCTTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: AKLRKIHIYKFCQFIRILRSYRS*MLALAS
Trigger: ACTGGCCAAGGCCAACATGCAGCTCCTATATGAGCG...GAGAATCCTGATGAACTGGCAGAACTTATAAATATGAATCTTGCGCAACTTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS-3UTR GCA 90 bp GGGCTAAGCCACTTAGTATCTCTGGGCTTTAGTTATAAAATGAGTAAACAGGACTTCAAGCTATTCTCGTaGCTCAGCCTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: GLSHLVSLGFSYKMSKQDFKLFS*LSLPSS
Trigger: GCTACTTGGGAGGCTGAGGCACGAGAATAGCTTGAA...GTCCTGTTTACTCATTTTATAACTAAAGCCCAGAGATACTAAGTGGCTTAGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR CCA 90 bp GTTTCGTTCTTGTCTCTCAGGCTGCAGTGCAACAGCATGATCTTGGCTCACTGCTACTTTTCACATCACTaGAAGTCTCTTCATCTGAAA +
Preference number: 4 (lower is better)
Translates to: VSFLSLRLQCNSMILAHCYFSHH*KSLHLK
Trigger: TTTCAGATGAAGAGACTTCCAGTGATGTGAAAAGTA...GCAGTGAGCCAAGATCATGCTGTTGCACTGCAGCCTGAGAGACAAGAACGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505868.1
3UTR CAA 72 bp CTTTATCATTTACTATCAGTAAAGAGGGGCAAATCCTaGCTGCCACCTTTGCGTAAAAGCGAGGTACAGCAG +
Preference number: 4 (lower is better)
Translates to: LYHLLSVKRGKS*LPPLRKSEVQQ
Trigger: CTGCTGTACCTCGCTTTTACGCAAAGGTGGCAGCAAGGATTTGCCCCTCTTTACTGATAGTAAATGATAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR TCA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGAGCTGTGCAATCCCTTaGAGGCTAGCAGCAAAGTGG +
Preference number: 4 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMSCAIP*RLAAKW
Trigger: CCACTTTGCTGCTAGCCTTCAAGGGATTGCACAGCT...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR TCA 90 bp TGCCACCTTTGCGTAAAAGCGAGGTACAGCAGAACATATGACAAGGATGACTACGAACTTCACTGTACATaGACCCAGGAAGTTTTAGTA +
Preference number: 4 (lower is better)
Translates to: CHLCVKARYSRTYDKDDYELHCT*TQEVLV
Trigger: TACTAAAACTTCCTGGGTTCATGTACAGTGAAGTTC...GTAGTCATCCTTGTCATATGTTCTGCTGTACCTCGCTTTTACGCAAAGGTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR TCA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGAGTTTGGCGAGGGTCTaGGTGATCTCGACATGTCAG +
Preference number: 4 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMSLARV*VISTCQ
Trigger: CTGACATGTCGAGATCACTCAGACCCTCGCCAAACT...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR TCA 90 bp ACAGCAGAACATATGACAAGGATGACTACAATTGTCAATCCCATTAATTCAGAGAGTTTGGCGAGGGTCTaGGTGATCTCGACATGTCAG +
Preference number: 4 (lower is better)
Translates to: TAEHMTRMTTIVNPINSESLARV*VISTCQ
Trigger: CTGACATGTCGAGATCACTCAGACCCTCGCCAAACT...CTCTGAATTAATGGGATTGACAATTGTAGTCATCCTTGTCATATGTTCTGCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR TCA 90 bp ACTTACAAAAACCTCTGTCTGTCACAATTAGTGAGTGCAAACAGAACTTCTACCGTGCAGCTCTCCCAATaGGTGAATCAGCTGTATTGG +
Preference number: 4 (lower is better)
Translates to: TYKNLCLSQLVSANRTSTVQLSQ*VNQLYW
Trigger: CCAATACAGCTGATTCACTCATTGGGAGAGCTGCAC...GGTAGAAGTTCTGTTTGCACTCACTAATTGTGACAGACAGAGGTTTTTGTAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000194672.11
ENST00000370479.7
ENST00000418814.7
CDS-3UTR GCA 90 bp TCAGTAAAGAGGGGCAAATCCTTGCTGCCACCTTTGCGTAAAAGCGAGGTACAGCATATTTATAAGTTCTaGCAGTTCATCAGGATTCTC +
Preference number: 4 (lower is better)
Translates to: SVKRGKSLLPPLRKSEVQHIYKF*QFIRIL
Trigger: GAGAATCCTGATGAACTGGCAGAACTTATAAATATG...CTGTACCTCGCTTTTACGCAAAGGTGGCAGCAAGGATTTGCCCCTCTTTACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR CCA 90 bp ACAGCTATATGTGCAGCTCTCCCAATGAGTGAATCAGCTGTATTGGGCAATGCAAGGCTAGCAGCAAAGTaGCACAAAGTGTATAATGAA +
Preference number: 4 (lower is better)
Translates to: TAICAALPMSESAVLGNARLAAK*HKVYNE
Trigger: TTCATTATACACTTTGTGCCACTTTGCTGCTAGCCT...TGCATTGCCCAATACAGCTGATTCACTCATTGGGAGAGCTGCACATATAGCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS-3UTR CCA 90 bp AAAGCGAGGTACAGCAGAACATATGACAAGGATGACTACAATTGTCAATCCCATCGTCTGATGACCTTCTaGATGCCAGATTGTGTTCCA +
Preference number: 4 (lower is better)
Translates to: KARYSRTYDKDDYNCQSHRLMTF*MPDCVP
Trigger: TGGAACACAATCTGGCATCCAGAAGGTCATCAGACG...ATGGGATTGACAATTGTAGTCATCCTTGTCATATGTTCTGCTGTACCTCGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR CCA 90 bp TTCGTTCTTGTCTCTCAGGCTGCAGTGCAACAGCATGATCTTGGCTCACTGCAATTGCTATCATTTAGATaGCATTCAGGTACAACAGAT +
Preference number: 4 (lower is better)
Translates to: FVLVSQAAVQQHDLGSLQLLSFR*HSGTTD
Trigger: ATCTGTTGTACCTGAATGCCATCTAAATGATAGCAA...TTGCAGTGAGCCAAGATCATGCTGTTGCACTGCAGCCTGAGAGACAAGAACGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR CCA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGACAAGGAGACTCTCGTaGTGCAGACGGGAAGGACAA +
Preference number: 4 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMTRRLS*CRREGQ
Trigger: TTGTCCTTCCCGTCTGCACCACGAGAGTCTCCTTGT...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR CCA 90 bp TTCGTTCTTGTCTCTCAGGCTGCAGTGCAACAGCATGATCTTGGCTCACTGCAATCTCATGTAGGTCTTTaGGTCAAAATTATATCCACA +
Preference number: 4 (lower is better)
Translates to: FVLVSQAAVQQHDLGSLQSHVGL*VKIIST
Trigger: TGTGGATATAATTTTGACCCAAAGACCTACATGAGA...TTGCAGTGAGCCAAGATCATGCTGTTGCACTGCAGCCTGAGAGACAAGAACGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR CCA 90 bp TCAGTAAAGAGGGGCAAATCCTTGCTGCCACCTTTGCGTAAAAGCGAGGTACAGAGGATCAAACTGGTCTaGTTGAACATTTTCAATATC +
Preference number: 4 (lower is better)
Translates to: SVKRGKSLLPPLRKSEVQRIKLV*LNIFNI
Trigger: GATATTGAAAATGTTCAACCAGACCAGTTTGATCCT...CTGTACCTCGCTTTTACGCAAAGGTGGCAGCAAGGATTTGCCCCTCTTTACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000505868.1
3UTR CAA 72 bp CTCTGGAAGCCTTTACACATAGTATCCAAGTTAGGTTaGGAGCTGCAACTACTTTTCACATCACTGGAAGTC +
Preference number: 4 (lower is better)
Translates to: LWKPLHIVSKLG*ELQLLFTSLEV
Trigger: GACTTCCAGTGATGTGAAAAGTAGTTGCAGCTCCAAACCTAACTTGGATACTATGTGTAAAGGCTTCCAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000194672.11
3UTR CAA 72 bp GATGACATTATAGCGAACCAAATTACAGTCCTTGCTTaGCAGAACGGGTCGAAGCAAGTTGTGGATCATTTC +
Preference number: 4 (lower is better)
Translates to: DDIIANQITVLA*QNGSKQVVDHF
Trigger: GAAATGATCCACAACTTGCTTCGACCCGTTCTGCAAAGCAAGGACTGTAATTTGGTTCGCTATAATGTCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS-3UTR TCA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAGCTGTGCAATCCCTTaGAGGCTAGCAGCAAAGTGG +
Preference number: 4 (lower is better)
Translates to: SNIQKSLSAANMYRNISSSCAIP*RLAAKW
Trigger: CCACTTTGCTGCTAGCCTTCAAGGGATTGCACAGCT...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR TCA 90 bp ATTGCTGTAGCTAACAGCACATGTGTCAGAAATATCCGTACTGCTTTGAGAACCTCCAAGGTCCTAGTTTaGCAGTTATATTCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: IAVANSTCVRNIRTALRTSKVLV*QLYSLH
Trigger: GTGGAGAGAATATAACTGTCAAACTAGGACCTTGGA...GGTTCTCAAAGCAGTACGGATATTTCTGACACATGTGCTGTTAGCTACAGCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS-3UTR TCA 90 bp ACTTACAAAAACCTCTGTCTGTCACAATTAGTGAGTGCAAACAGAACTTCTACCTCAGAAGTTTCCTTCTaGGGGCTAAGTGCATTGCTG +
Preference number: 4 (lower is better)
Translates to: TYKNLCLSQLVSANRTSTSEVSF*GLSALL
Trigger: CAGCAATGCACTTAGCCCTCAGAAGGAAACTTCTGA...GGTAGAAGTTCTGTTTGCACTCACTAATTGTGACAGACAGAGGTTTTTGTAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000194672.11
ENST00000370479.7
ENST00000418814.7
CDS-3UTR TCA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAGTTTGGCGAGGGTCTaGGTGATCTCGACATGTCAG +
Preference number: 4 (lower is better)
Translates to: SNIQKSLSAANMYRNISSSLARV*VISTCQ
Trigger: CTGACATGTCGAGATCACTCAGACCCTCGCCAAACT...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR TCA 90 bp ACAGCTATATGTGCAGCTCTCCCAATGAGTGAATCAGCTGTATTGGGCAATGCACTAGCACAACATTTTTaGAATAATGAAGCCCTGCTT +
Preference number: 4 (lower is better)
Translates to: TAICAALPMSESAVLGNALAQHF*NNEALL
Trigger: AAGCAGGGCTTCATTATTTCAAAAATGTTGTGCTAG...TGCATTGCCCAATACAGCTGATTCACTCATTGGGAGAGCTGCACATATAGCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS-3UTR TCA 90 bp ACTTACAAAAACCTCTGTCTGTCACAATTAGTGAGTGCAAACAGAACTTCTACCAGCTCTCCCAATGAGTaGATCAGCTGTATTGGGCAA +
Preference number: 4 (lower is better)
Translates to: TYKNLCLSQLVSANRTSTSSPNE*ISCIGQ
Trigger: TTGCCCAATACAGCTGATTCACTCATTGGGAGAGCT...GGTAGAAGTTCTGTTTGCACTCACTAATTGTGACAGACAGAGGTTTTTGTAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000194672.11
ENST00000370479.7
ENST00000418814.7
CDS-3UTR TCA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGGTGCAGCTCTCCCAATaGGTGAATCAGCTGTATTGG +
Preference number: 4 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMVQLSQ*VNQLYW
Trigger: CCAATACAGCTGATTCACTCATTGGGAGAGCTGCAC...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR GCA 90 bp CCCCAGGCAATCCAAGTTCAATGTAAGTTTTTACTAATCGGAGATCTGCACTGTATGCCTCAGAAAATCTaGGTACCCTCAAAGTATGGT +
Preference number: 4 (lower is better)
Translates to: PQAIQVQCKFLLIGDLHCMPQKI*VPSKYG
Trigger: ACCATACTTTGAGGGTACGCAGATTTTCTGAGGCAT...ACAGTGCAGATCTCCGATTAGTAAAAACTTACATTGAACTTGGATTGCCTGGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS-3UTR GCA 90 bp GGGCTAAGCCACTTAGTATCTCTGGGCTTTAGTTATAAAATGAGTAAACAGGACATGAAGTTCCTGGTATaGAATGGCAGCTTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: GLSHLVSLGFSYKMSKQDMKFLV*NGSFSW
Trigger: CCAAGAGAAGCTGCCATTGCATACCAGGAACTTCAT...GTCCTGTTTACTCATTTTATAACTAAAGCCCAGAGATACTAAGTGGCTTAGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR GCA 90 bp TGCCACCTTTGCGTAAAAGCGAGGTACAGCAGAACATATGACAAGGATGACTACACAACACTCTGCTGTTaGAAAGTGATACTTGACTTT +
Preference number: 4 (lower is better)
Translates to: CHLCVKARYSRTYDKDDYTTLCC*KVILDF
Trigger: AAAGTCAAGTATCACTTTGCAACAGCAGAGTGTTGT...GTAGTCATCCTTGTCATATGTTCTGCTGTACCTCGCTTTTACGCAAAGGTGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR GCA 90 bp TGCCACCTTTGCGTAAAAGCGAGGTACAGCAGAACATATGACAAGGATGACTACTTTTCCACAAGCCCTTaGTTTACTATATCAGTACTG +
Preference number: 4 (lower is better)
Translates to: CHLCVKARYSRTYDKDDYFSTSP*FTISVL
Trigger: CAGTACTGATATAGTAAAGCAAGGGCTTGTGGAAAA...GTAGTCATCCTTGTCATATGTTCTGCTGTACCTCGCTTTTACGCAAAGGTGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR GCA 90 bp GCAAAGTTGCGCAAGATTCATATTTATAAGTTCTGCCAGTTCATCAGGATTCTCCTTCTGAGGGCTAAGTaGATTGCTGTAGCTAACAGC +
Preference number: 4 (lower is better)
Translates to: AKLRKIHIYKFCQFIRILLLRAK*IAVANS
Trigger: GCTGTTAGCTACAGCAATGCACTTAGCCCTCAGAAG...GAGAATCCTGATGAACTGGCAGAACTTATAAATATGAATCTTGCGCAACTTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS-3UTR GCA 90 bp ACTTACAAAAACCTCTGTCTGTCACAATTAGTGAGTGCAAACAGAACTTCTACCCTTCTGAGGGCTAAGTaGATTGCTGTAGCTAACAGC +
Preference number: 4 (lower is better)
Translates to: TYKNLCLSQLVSANRTSTLLRAK*IAVANS
Trigger: GCTGTTAGCTACAGCAATGCACTTAGCCCTCAGAAG...GGTAGAAGTTCTGTTTGCACTCACTAATTGTGACAGACAGAGGTTTTTGTAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000194672.11
ENST00000370479.7
ENST00000418814.7
CDS-3UTR GCA 90 bp TTGTCAATCCCATTAATTCAGAGGAAATCAAAGTATGAACTACTTCTGAGGCAGTCTCTCAGGCTGCAGTaGAACAGCATGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: LSIPLIQRKSKYELLLRQSLRLQ*NSMILA
Trigger: AGCCAAGATCATGCTGTTGCACTGCAGCCTGAGAGA...CTGCCTCAGAAGTAGTTCATACTTTGATTTCCTCTGAATTAATGGGATTGACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR CCA 90 bp TTCCTTCTGAGGGCTAAGTGCATTGCTGTAGCTAACAGCACATGTGTCAGAAATTCCATTTCCTCTAGATaGTTGTCTTTCTGTGTTCGT +
Preference number: 4 (lower is better)
Translates to: FLLRAKCIAVANSTCVRNSISSR*LSFCVR
Trigger: ACGAACACAGAAAGACAACCATCTAGAGGAAATGGA...ATTTCTGACACATGTGCTGTTAGCTACAGCAATGCACTTAGCCCTCAGAAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS-3UTR CCA 90 bp TGCCACCTTTGCGTAAAAGCGAGGTACAGCAGAACATATGACAAGGATGACTACATTTCACTATCGTCCTaGGAGATATCAAGTTTACCT +
Preference number: 4 (lower is better)
Translates to: CHLCVKARYSRTYDKDDYISLSS*EISSLP
Trigger: AGGTAAACTTGATATCTCCCAGGACGATAGTGAAAT...GTAGTCATCCTTGTCATATGTTCTGCTGTACCTCGCTTTTACGCAAAGGTGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR CCA 90 bp TGCCACCTTTGCGTAAAAGCGAGGTACAGCAGAACATATGACAAGGATGACTACGATTTATCAGGACTCTaGAAGCCTTTACACATAGTA +
Preference number: 4 (lower is better)
Translates to: CHLCVKARYSRTYDKDDYDLSGL*KPLHIV
Trigger: TACTATGTGTAAAGGCTTCCAGAGTCCTGATAAATC...GTAGTCATCCTTGTCATATGTTCTGCTGTACCTCGCTTTTACGCAAAGGTGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR CCA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTACAAGGAGACTCTCGTaGTGCAGACGGGAAGGACAA +
Preference number: 4 (lower is better)
Translates to: SNIQKSLSAANMYRNISSTRRLS*CRREGQ
Trigger: TTGTCCTTCCCGTCTGCACCACGAGAGTCTCCTTGT...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR CCA 90 bp AAGTGCATTGCTGTAGCTAACAGCACATGTGTCAGAAATATCCGTACTGCTTTGGTAAGAAGTACTGCTTaGCTGCTTTGTAATGGCATC +
Preference number: 4 (lower is better)
Translates to: KCIAVANSTCVRNIRTALVRSTA*LLCNGI
Trigger: GATGCCATTACAAAGCAGCCAAGCAGTACTTCTTAC...CAAAGCAGTACGGATATTTCTGACACATGTGCTGTTAGCTACAGCAATGCACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000194672.11
3UTR CAA 72 bp CTTGCCCTTGCACAGTTTCAAAGACTAAATCAGTGTTaGGATGTGTCGCAAAAGAACTCGGTTCACTTTCAA +
Preference number: 4 (lower is better)
Translates to: LALAQFQRLNQC*DVSQKNSVHFQ
Trigger: TTGAAAGTGAACCGAGTTCTTTTGCGACACATCCAAACACTGATTTAGTCTTTGAAACTGTGCAAGGGCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS-3UTR TCA 90 bp ACTTACAAAAACCTCTGTCTGTCACAATTAGTGAGTGCAAACAGAACTTCTACCAGAATTTTCATCAGGTaGCAGTTCATCATCGGAGGG +
Preference number: 4 (lower is better)
Translates to: TYKNLCLSQLVSANRTSTRIFIR*QFIIGG
Trigger: CCCTCCGATGATGAACTGTCACCTGATGAAAATTCT...GGTAGAAGTTCTGTTTGCACTCACTAATTGTGACAGACAGAGGTTTTTGTAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000194672.11
ENST00000370479.7
ENST00000418814.7
CDS-3UTR TCA 90 bp ACTTACAAAAACCTCTGTCTGTCACAATTAGTGAGTGCAAACAGAACTTCTACCACTAGAAATGGAACCTaGAATGACACAAGGAGTGCC +
Preference number: 4 (lower is better)
Translates to: TYKNLCLSQLVSANRTSTTRNGT*NDTRSA
Trigger: GGCACTCCTTGTGTCATTTCAGGTTCCATTTCTAGT...GGTAGAAGTTCTGTTTGCACTCACTAATTGTGACAGACAGAGGTTTTTGTAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000194672.11
ENST00000370479.7
ENST00000418814.7
CDS-3UTR TCA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGTCAGAAGTTTCCTTCTaGGGGCTAAGTGCATTGCTG +
Preference number: 4 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMSEVSF*GLSALL
Trigger: CAGCAATGCACTTAGCCCTCAGAAGGAAACTTCTGA...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR TCA 90 bp ACAGCAGAACATATGACAAGGATGACTACAATTGTCAATCCCATTAATTCAGAGTCAGAAGTTTCCTTCTaGGGGCTAAGTGCATTGCTG +
Preference number: 4 (lower is better)
Translates to: TAEHMTRMTTIVNPINSESEVSF*GLSALL
Trigger: CAGCAATGCACTTAGCCCTCAGAAGGAAACTTCTGA...CTCTGAATTAATGGGATTGACAATTGTAGTCATCCTTGTCATATGTTCTGCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR TCA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGAGCTCTCCCAATGAGTaGATCAGCTGTATTGGGCAA +
Preference number: 4 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMSSPNE*ISCIGQ
Trigger: TTGCCCAATACAGCTGATTCACTCATTGGGAGAGCT...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR TCA 90 bp ATTGCTGTAGCTAACAGCACATGTGTCAGAAATATCCGTACTGCTTTGAGAACCACTATTGGAAATATTTaGGGGCAGCAACCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: IAVANSTCVRNIRTALRTTIGNI*GQQPER
Trigger: TCTTTCTGGTTGCTGCCCTCAAATATTTCCAATAGT...GGTTCTCAAAGCAGTACGGATATTTCTGACACATGTGCTGTTAGCTACAGCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS-3UTR TCA 90 bp GGGCTAAGCCACTTAGTATCTCTGGGCTTTAGTTATAAAATGAGTAAACAGGACGCAACCAATGATGCATaGACTGTAACAGACACAACA +
Preference number: 4 (lower is better)
Translates to: GLSHLVSLGFSYKMSKQDATNDA*TVTDTT
Trigger: TGTTGTGTCTGTTACAGTTCATGCATCATTGGTTGC...GTCCTGTTTACTCATTTTATAACTAAAGCCCAGAGATACTAAGTGGCTTAGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR GCA 90 bp ACTTACAAAAACCTCTGTCTGTCACAATTAGTGAGTGCAAACAGAACTTCTACCCTATTGCAAGGACCTTaGCCTTGCACAGTTTCAAAG +
Preference number: 4 (lower is better)
Translates to: TYKNLCLSQLVSANRTSTLLQGP*PCTVSK
Trigger: CTTTGAAACTGTGCAAGGGCAAGGTCCTTGCAATAG...GGTAGAAGTTCTGTTTGCACTCACTAATTGTGACAGACAGAGGTTTTTGTAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000194672.11
ENST00000370479.7
ENST00000418814.7
CDS-3UTR GCA 90 bp ATTGCTGTAGCTAACAGCACATGTGTCAGAAATATCCGTACTGCTTTGAGAACCATAATCTTTCACTATTaGAAGGACCTTGCCCTTGCA +
Preference number: 4 (lower is better)
Translates to: IAVANSTCVRNIRTALRTIIFHY*KDLALA
Trigger: TGCAAGGGCAAGGTCCTTGCAATAGTGAAAGATTAT...GGTTCTCAAAGCAGTACGGATATTTCTGACACATGTGCTGTTAGCTACAGCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS-3UTR GCA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGCTTCTGAGGGCTAAGTaGATTGCTGTAGCTAACAGC +
Preference number: 4 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMLLRAK*IAVANS
Trigger: GCTGTTAGCTACAGCAATGCACTTAGCCCTCAGAAG...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR GCA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGCTATGGGGGCTAAAGTaGAGCTTCAATGTTCGGCTA +
Preference number: 4 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMLWGLK*SFNVRL
Trigger: TAGCCGAACATTGAAGCTGCACTTTAGCCCCCATAG...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR CCA 90 bp CCCCAGGCAATCCAAGTTCAATGTAAGTTTTTACTAATCGGAGATCTGCACTGTCTAGCTTCTACTCTGTaGGGAATTCTTGATGGAATT +
Preference number: 4 (lower is better)
Translates to: PQAIQVQCKFLLIGDLHCLASTL*GILDGI
Trigger: AATTCCATCAAGAATTCCCCACAGAGTAGAAGCTAG...ACAGTGCAGATCTCCGATTAGTAAAAACTTACATTGAACTTGGATTGCCTGGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS-3UTR CCA 90 bp ATTGCTGTAGCTAACAGCACATGTGTCAGAAATATCCGTACTGCTTTGAGAACCAAGCTTATTAGTGGCTaGTGTAGTGCAACCAATGAT +
Preference number: 4 (lower is better)
Translates to: IAVANSTCVRNIRTALRTKLISG*CSATND
Trigger: ATCATTGGTTGCACTACACCAGCCACTAATAAGCTT...GGTTCTCAAAGCAGTACGGATATTTCTGACACATGTGCTGTTAGCTACAGCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS-3UTR CCA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGATAGGAGCTGCATGTTaGCCTTGGCCAGTTCTAGTT +
Preference number: 4 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMIGAAC*PWPVLV
Trigger: AACTAGAACTGGCCAAGGCCAACATGCAGCTCCTAT...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000194672.11
ENST00000457062.6
CDS-3UTR CCA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGCGTCTGATGACCTTCTaGATGCCAGATTGTGTTCCA +
Preference number: 4 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMRLMTF*MPDCVP
Trigger: TGGAACACAATCTGGCATCCAGAAGGTCATCAGACG...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR CCA 90 bp TGCCACCTTTGCGTAAAAGCGAGGTACAGCAGAACATATGACAAGGATGACTACCTAAGGACTCAAAGTTaGGTAGTAAATTATCCACAA +
Preference number: 4 (lower is better)
Translates to: CHLCVKARYSRTYDKDDYLRTQS*VVNYPQ
Trigger: TTGTGGATAATTTACTACCCAACTTTGAGTCCTTAG...GTAGTCATCCTTGTCATATGTTCTGCTGTACCTCGCTTTTACGCAAAGGTGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR CCA 90 bp TTCCTTCTGAGGGCTAAGTGCATTGCTGTAGCTAACAGCACATGTGTCAGAAATGATTTATCAGGACTCTaGAAGCCTTTACACATAGTA +
Preference number: 4 (lower is better)
Translates to: FLLRAKCIAVANSTCVRNDLSGL*KPLHIV
Trigger: TACTATGTGTAAAGGCTTCCAGAGTCCTGATAAATC...ATTTCTGACACATGTGCTGTTAGCTACAGCAATGCACTTAGCCCTCAGAAGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS-3UTR CCA 90 bp ACTTACAAAAACCTCTGTCTGTCACAATTAGTGAGTGCAAACAGAACTTCTACCTCTGACTTTCAACTCTaGGCTAGAAAGTCCTGCTAC +
Preference number: 4 (lower is better)
Translates to: TYKNLCLSQLVSANRTSTSDFQL*ARKSCY
Trigger: GTAGCAGGACTTTCTAGCCCAGAGTTGAAAGTCAGA...GGTAGAAGTTCTGTTTGCACTCACTAATTGTGACAGACAGAGGTTTTTGTAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370479.7
ENST00000418814.7
CDS-3UTR TCA 90 bp TCTGGATGCCAGATTGTGTTCCATTTGTGTAATTTCACTATCGTCCTGGGAGATAATAATCTCCATCTGTaGAGTGTAGATCCAAGGATA +
Preference number: 4 (lower is better)
Translates to: SGCQIVFHLCNFTIVLGDNNLHL*SVDPRI
Trigger: TATCCTTGGATCTACACTTCACAGATGGAGATTATT...ATCTCCCAGGACGATAGTGAAATTACACAAATGGAACACAATCTGGCATCCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS-3UTR TCA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGAGAATTTTCATCAGGTaGCAGTTCATCATCGGAGGG +
Preference number: 4 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMRIFIR*QFIIGG
Trigger: CCCTCCGATGATGAACTGTCACCTGATGAAAATTCT...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
CDS-3UTR TCA 90 bp TATCAGTACTGGCTGAAAAAGGATCACTTGTACCCAGATGAGTTTCACTTTCAAATTGTCCAAGTTCCCTaGAAATACAACACTCTGCTG +
Preference number: 4 (lower is better)
Translates to: YQYWLKKDHLYPDEFHFQIVQVP*KYNTLL
Trigger: CAGCAGAGTGTTGTATTTTCAGGGAACTTGGACAAT...TTGAAAGTGAAACTCATCTGGGTACAAGTGATCCTTTTTCAGCCAGTACTGATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS-3UTR TCA 90 bp ACTTACAAAAACCTCTGTCTGTCACAATTAGTGAGTGCAAACAGAACTTCTACCATTGTCCAAGTTCCCTaGAAATACAACACTCTGCTG +
Preference number: 4 (lower is better)
Translates to: TYKNLCLSQLVSANRTSTIVQVP*KYNTLL
Trigger: CAGCAGAGTGTTGTATTTTCAGGGAACTTGGACAAT...GGTAGAAGTTCTGTTTGCACTCACTAATTGTGACAGACAGAGGTTTTTGTAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000194672.11
ENST00000370479.7
ENST00000418814.7
CDS-3UTR TCA 90 bp CTCAAAGTATGGTGCTCTTGTGCTAATAATATTCTTAGTTCTTCGTGTAGCGTTACTAGAAATGGAACCTaGAATGACACAAGGAGTGCC +
Preference number: 4 (lower is better)
Translates to: LKVWCSCANNILSSSCSVTRNGT*NDTRSA
Trigger: GGCACTCCTTGTGTCATTTCAGGTTCCATTTCTAGT...AACGCTACACGAAGAACTAAGAATATTATTAGCACAAGAGCACCATACTTTGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS-3UTR TCA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGACTAGAAATGGAACCTaGAATGACACAAGGAGTGCC +
Preference number: 4 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMTRNGT*NDTRSA
Trigger: GGCACTCCTTGTGTCATTTCAGGTTCCATTTCTAGT...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR TCA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTTCAGAAGTTTCCTTCTaGGGGCTAAGTGCATTGCTG +
Preference number: 4 (lower is better)
Translates to: SNIQKSLSAANMYRNISSSEVSF*GLSALL
Trigger: CAGCAATGCACTTAGCCCTCAGAAGGAAACTTCTGA...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR TCA 90 bp AAAGCGAGGTACAGCAGAACATATGACAAGGATGACTACAATTGTCAATCCCATAGGAAATCGAAGAAGTaGAGTTGTAAGAAGTACTGC +
Preference number: 4 (lower is better)
Translates to: KARYSRTYDKDDYNCQSHRKSKK*SCKKYC
Trigger: GCAGTACTTCTTACAACTTCACTTCTTCGATTTCCT...ATGGGATTGACAATTGTAGTCATCCTTGTCATATGTTCTGCTGTACCTCGCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR TCA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAGCTCTCCCAATGAGTaGATCAGCTGTATTGGGCAA +
Preference number: 4 (lower is better)
Translates to: SNIQKSLSAANMYRNISSSSPNE*ISCIGQ
Trigger: TTGCCCAATACAGCTGATTCACTCATTGGGAGAGCT...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR TCA 90 bp ACTTACAAAAACCTCTGTCTGTCACAATTAGTGAGTGCAAACAGAACTTCTACCGTTTGTGGACTGCTTTaGGATTCCAGAACCAAATAC +
Preference number: 4 (lower is better)
Translates to: TYKNLCLSQLVSANRTSTVCGLL*DSRTKY
Trigger: GTATTTGGTTCTGGAATCTCAAAGCAGTCCACAAAC...GGTAGAAGTTCTGTTTGCACTCACTAATTGTGACAGACAGAGGTTTTTGTAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418814.7
CDS-3UTR TCA 90 bp ACTTACAAAAACCTCTGTCTGTCACAATTAGTGAGTGCAAACAGAACTTCTACCGCAACCAATGATGCATaGACTGTAACAGACACAACA +
Preference number: 4 (lower is better)
Translates to: TYKNLCLSQLVSANRTSTATNDA*TVTDTT
Trigger: TGTTGTGTCTGTTACAGTTCATGCATCATTGGTTGC...GGTAGAAGTTCTGTTTGCACTCACTAATTGTGACAGACAGAGGTTTTTGTAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370479.7
ENST00000418814.7
CDS-3UTR TCA 90 bp TTGTCAATCCCATTAATTCAGAGGAAATCAAAGTATGAACTACTTCTGAGGCAGCGGAGACCAGGTTCTTaGCCTAAGTCTGTAATTAAC +
Preference number: 4 (lower is better)
Translates to: LSIPLIQRKSKYELLLRQRRPGS*PKSVIN
Trigger: GTTAATTACAGACTTAGGTCAAGAACCTGGTCTCCG...CTGCCTCAGAAGTAGTTCATACTTTGATTTCCTCTGAATTAATGGGATTGACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR GCA 90 bp CAGCACATGTGTCAGAAATATCCGTACTGCTTTGAGAACCAAAATAATTTTCCAATGAAGTTCCTGGTATaGAATGGCAGCTTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: QHMCQKYPYCFENQNNFPMKFLV*NGSFSW
Trigger: CCAAGAGAAGCTGCCATTGCATACCAGGAACTTCAT...TGGAAAATTATTTTGGTTCTCAAAGCAGTACGGATATTTCTGACACATGTGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS-3UTR GCA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGATGAAGTTCCTGGTATaGAATGGCAGCTTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMMKFLV*NGSFSW
Trigger: CCAAGAGAAGCTGCCATTGCATACCAGGAACTTCAT...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR GCA 90 bp GGGCTAAGCCACTTAGTATCTCTGGGCTTTAGTTATAAAATGAGTAAACAGGACATAATCTTTCACTATTaGAAGGACCTTGCCCTTGCA +
Preference number: 4 (lower is better)
Translates to: GLSHLVSLGFSYKMSKQDIIFHY*KDLALA
Trigger: TGCAAGGGCAAGGTCCTTGCAATAGTGAAAGATTAT...GTCCTGTTTACTCATTTTATAACTAAAGCCCAGAGATACTAAGTGGCTTAGCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR GCA 90 bp ATTGCTGTAGCTAACAGCACATGTGTCAGAAATATCCGTACTGCTTTGAGAACCTTTTCCACAAGCCCTTaGTTTACTATATCAGTACTG +
Preference number: 4 (lower is better)
Translates to: IAVANSTCVRNIRTALRTFSTSP*FTISVL
Trigger: CAGTACTGATATAGTAAAGCAAGGGCTTGTGGAAAA...GGTTCTCAAAGCAGTACGGATATTTCTGACACATGTGCTGTTAGCTACAGCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS-3UTR GCA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTCTTCTGAGGGCTAAGTaGATTGCTGTAGCTAACAGC +
Preference number: 4 (lower is better)
Translates to: SNIQKSLSAANMYRNISSLLRAK*IAVANS
Trigger: GCTGTTAGCTACAGCAATGCACTTAGCCCTCAGAAG...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR GCA 90 bp GGGCTAAGCCACTTAGTATCTCTGGGCTTTAGTTATAAAATGAGTAAACAGGACGAAGTACTGCTTGGCTaGTTTGTAATGGCATCAAAT +
Preference number: 4 (lower is better)
Translates to: GLSHLVSLGFSYKMSKQDEVLLG*FVMASN
Trigger: ATTTGATGCCATTACAAAGCAGCCAAGCAGTACTTC...GTCCTGTTTACTCATTTTATAACTAAAGCCCAGAGATACTAAGTGGCTTAGCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR GCA 90 bp CTCAAAGTATGGTGCTCTTGTGCTAATAATATTCTTAGTTCTTCGTGTAGCGTTCCAAATTACAGTCCTTaGTTTGCAGAACGGGTCGAA +
Preference number: 4 (lower is better)
Translates to: LKVWCSCANNILSSSCSVPNYSP*FAERVE
Trigger: TTCGACCCGTTCTGCAAAGCAAGGACTGTAATTTGG...AACGCTACACGAAGAACTAAGAATATTATTAGCACAAGAGCACCATACTTTGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS-3UTR GCA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGCCAAATTACAGTCCTTaGTTTGCAGAACGGGTCGAA +
Preference number: 4 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMPNYSP*FAERVE
Trigger: TTCGACCCGTTCTGCAAAGCAAGGACTGTAATTTGG...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR GCA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTCTATGGGGGCTAAAGTaGAGCTTCAATGTTCGGCTA +
Preference number: 4 (lower is better)
Translates to: SNIQKSLSAANMYRNISSLWGLK*SFNVRL
Trigger: TAGCCGAACATTGAAGCTGCACTTTAGCCCCCATAG...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR GCA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGTGGGCTAGAAAGTCCTaGTACAGAGCTTTCTTCAGT +
Preference number: 4 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMWARKS*YRAFFS
Trigger: ACTGAAGAAAGCTCTGTAGCAGGACTTTCTAGCCCA...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370479.7
ENST00000418814.7
CDS-3UTR CCA 90 bp AAAGCGAGGTACAGCAGAACATATGACAAGGATGACTACAATTGTCAATCCCATCTAGCTTCTACTCTGTaGGGAATTCTTGATGGAATT +
Preference number: 4 (lower is better)
Translates to: KARYSRTYDKDDYNCQSHLASTL*GILDGI
Trigger: AATTCCATCAAGAATTCCCCACAGAGTAGAAGCTAG...ATGGGATTGACAATTGTAGTCATCCTTGTCATATGTTCTGCTGTACCTCGCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR CCA 90 bp GGGCTAAGCCACTTAGTATCTCTGGGCTTTAGTTATAAAATGAGTAAACAGGACAGGCTAGCAGCAAAGTaGCACAAAGTGTATAATGAA +
Preference number: 4 (lower is better)
Translates to: GLSHLVSLGFSYKMSKQDRLAAK*HKVYNE
Trigger: TTCATTATACACTTTGTGCCACTTTGCTGCTAGCCT...GTCCTGTTTACTCATTTTATAACTAAAGCCCAGAGATACTAAGTGGCTTAGCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR CCA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTATAGGAGCTGCATGTTaGCCTTGGCCAGTTCTAGTT +
Preference number: 4 (lower is better)
Translates to: SNIQKSLSAANMYRNISSIGAAC*PWPVLV
Trigger: AACTAGAACTGGCCAAGGCCAACATGCAGCTCCTAT...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000194672.11
ENST00000457062.6
CDS-3UTR CCA 90 bp ATTGCTGTAGCTAACAGCACATGTGTCAGAAATATCCGTACTGCTTTGAGAACCATTTCACTATCGTCCTaGGAGATATCAAGTTTACCT +
Preference number: 4 (lower is better)
Translates to: IAVANSTCVRNIRTALRTISLSS*EISSLP
Trigger: AGGTAAACTTGATATCTCCCAGGACGATAGTGAAAT...GGTTCTCAAAGCAGTACGGATATTTCTGACACATGTGCTGTTAGCTACAGCAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS-3UTR CCA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTCGTCTGATGACCTTCTaGATGCCAGATTGTGTTCCA +
Preference number: 4 (lower is better)
Translates to: SNIQKSLSAANMYRNISSRLMTF*MPDCVP
Trigger: TGGAACACAATCTGGCATCCAGAAGGTCATCAGACG...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR CCA 90 bp ACTTACAAAAACCTCTGTCTGTCACAATTAGTGAGTGCAAACAGAACTTCTACCGTAAGAAGTACTGCTTaGCTGCTTTGTAATGGCATC +
Preference number: 4 (lower is better)
Translates to: TYKNLCLSQLVSANRTSTVRSTA*LLCNGI
Trigger: GATGCCATTACAAAGCAGCCAAGCAGTACTTCTTAC...GGTAGAAGTTCTGTTTGCACTCACTAATTGTGACAGACAGAGGTTTTTGTAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000194672.11
ENST00000370479.7
ENST00000418814.7
CDS-3UTR CCA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGTCTGACTTTCAACTCTaGGCTAGAAAGTCCTGCTAC +
Preference number: 4 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMSDFQL*ARKSCY
Trigger: GTAGCAGGACTTTCTAGCCCAGAGTTGAAAGTCAGA...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370479.7
ENST00000418814.7
CDS-3UTR TCA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGTCCAAGGTCCTAGTTTaGCAGTTATATTCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMSKVLV*QLYSLH
Trigger: GTGGAGAGAATATAACTGTCAAACTAGGACCTTGGA...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR TCA 90 bp ACAGCAGAACATATGACAAGGATGACTACAATTGTCAATCCCATTAATTCAGAGTCCAAGGTCCTAGTTTaGCAGTTATATTCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: TAEHMTRMTTIVNPINSESKVLV*QLYSLH
Trigger: GTGGAGAGAATATAACTGTCAAACTAGGACCTTGGA...CTCTGAATTAATGGGATTGACAATTGTAGTCATCCTTGTCATATGTTCTGCTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR TCA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAGAATTTTCATCAGGTaGCAGTTCATCATCGGAGGG +
Preference number: 4 (lower is better)
Translates to: SNIQKSLSAANMYRNISSRIFIR*QFIIGG
Trigger: CCCTCCGATGATGAACTGTCACCTGATGAAAATTCT...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
CDS-3UTR TCA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGATTGTCCAAGTTCCCTaGAAATACAACACTCTGCTG +
Preference number: 4 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMIVQVP*KYNTLL
Trigger: CAGCAGAGTGTTGTATTTTCAGGGAACTTGGACAAT...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
CDS-3UTR TCA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGAAATGGAACCTGAAATaGCACAAGGAGTGCCTAAAC +
Preference number: 4 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMKWNLK*HKECLN
Trigger: GTTTAGGCACTCCTTGTGTCATTTCAGGTTCCATTT...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR TCA 90 bp TTGTCAATCCCATTAATTCAGAGGAAATCAAAGTATGAACTACTTCTGAGGCAGAAATGGAACCTGAAATaGCACAAGGAGTGCCTAAAC +
Preference number: 4 (lower is better)
Translates to: LSIPLIQRKSKYELLLRQKWNLK*HKECLN
Trigger: GTTTAGGCACTCCTTGTGTCATTTCAGGTTCCATTT...CTGCCTCAGAAGTAGTTCATACTTTGATTTCCTCTGAATTAATGGGATTGACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR TCA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTACTAGAAATGGAACCTaGAATGACACAAGGAGTGCC +
Preference number: 4 (lower is better)
Translates to: SNIQKSLSAANMYRNISSTRNGT*NDTRSA
Trigger: GGCACTCCTTGTGTCATTTCAGGTTCCATTTCTAGT...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR TCA 90 bp ACTTACAAAAACCTCTGTCTGTCACAATTAGTGAGTGCAAACAGAACTTCTACCTCACTTGTACCCAGATaGGTTTCACTTTCAACTGTA +
Preference number: 4 (lower is better)
Translates to: TYKNLCLSQLVSANRTSTSLVPR*VSLSTV
Trigger: TACAGTTGAAAGTGAAACTCATCTGGGTACAAGTGA...GGTAGAAGTTCTGTTTGCACTCACTAATTGTGACAGACAGAGGTTTTTGTAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000194672.11
ENST00000370479.7
ENST00000418814.7
CDS-3UTR TCA 90 bp GCAAAGTTGCGCAAGATTCATATTTATAAGTTCTGCCAGTTCATCAGGATTCTCTATATCAGTACTGGCTaGAAAAGGATCACTTGTACC +
Preference number: 4 (lower is better)
Translates to: AKLRKIHIYKFCQFIRILYISTG*KRITCT
Trigger: GGTACAAGTGATCCTTTTTCAGCCAGTACTGATATA...GAGAATCCTGATGAACTGGCAGAACTTATAAATATGAATCTTGCGCAACTTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS-3UTR TCA 90 bp ACTTACAAAAACCTCTGTCTGTCACAATTAGTGAGTGCAAACAGAACTTCTACCTATATCAGTACTGGCTaGAAAAGGATCACTTGTACC +
Preference number: 4 (lower is better)
Translates to: TYKNLCLSQLVSANRTSTYISTG*KRITCT
Trigger: GGTACAAGTGATCCTTTTTCAGCCAGTACTGATATA...GGTAGAAGTTCTGTTTGCACTCACTAATTGTGACAGACAGAGGTTTTTGTAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000194672.11
ENST00000370479.7
ENST00000418814.7
CDS-3UTR TCA 90 bp TATCAGTACTGGCTGAAAAAGGATCACTTGTACCCAGATGAGTTTCACTTTCAAGAACTTCACTGTACATaGACCCAGGAAGTTTTAGTA +
Preference number: 4 (lower is better)
Translates to: YQYWLKKDHLYPDEFHFQELHCT*TQEVLV
Trigger: TACTAAAACTTCCTGGGTTCATGTACAGTGAAGTTC...TTGAAAGTGAAACTCATCTGGGTACAAGTGATCCTTTTTCAGCCAGTACTGATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS-3UTR TCA 90 bp ACTTACAAAAACCTCTGTCTGTCACAATTAGTGAGTGCAAACAGAACTTCTACCGAACTTCACTGTACATaGACCCAGGAAGTTTTAGTA +
Preference number: 4 (lower is better)
Translates to: TYKNLCLSQLVSANRTSTELHCT*TQEVLV
Trigger: TACTAAAACTTCCTGGGTTCATGTACAGTGAAGTTC...GGTAGAAGTTCTGTTTGCACTCACTAATTGTGACAGACAGAGGTTTTTGTAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000194672.11
ENST00000370479.7
ENST00000418814.7
CDS-3UTR TCA 90 bp GGGCTAAGCCACTTAGTATCTCTGGGCTTTAGTTATAAAATGAGTAAACAGGACCTAGCACAACATTTTTaGAATAATGAAGCCCTGCTT +
Preference number: 4 (lower is better)
Translates to: GLSHLVSLGFSYKMSKQDLAQHF*NNEALL
Trigger: AAGCAGGGCTTCATTATTTCAAAAATGTTGTGCTAG...GTCCTGTTTACTCATTTTATAACTAAAGCCCAGAGATACTAAGTGGCTTAGCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR TCA 90 bp ACTTACAAAAACCTCTGTCTGTCACAATTAGTGAGTGCAAACAGAACTTCTACCACTATTGGAAATATTTaGGGGCAGCAACCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: TYKNLCLSQLVSANRTSTTIGNI*GQQPER
Trigger: TCTTTCTGGTTGCTGCCCTCAAATATTTCCAATAGT...GGTAGAAGTTCTGTTTGCACTCACTAATTGTGACAGACAGAGGTTTTTGTAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000194672.11
ENST00000370479.7
ENST00000418814.7
CDS-3UTR GCA 90 bp GCAAAGTTGCGCAAGATTCATATTTATAAGTTCTGCCAGTTCATCAGGATTCTCGTCATACCTGTTGCATaGAACAAACTAGCTTCTACT +
Preference number: 4 (lower is better)
Translates to: AKLRKIHIYKFCQFIRILVIPVA*NKLAST
Trigger: AGTAGAAGCTAGTTTGTTGCATGCAACAGGTATGAC...GAGAATCCTGATGAACTGGCAGAACTTATAAATATGAATCTTGCGCAACTTTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS-3UTR GCA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGATGCCTCAGAAAATCTaGGTACCCTCAAAGTATGGT +
Preference number: 4 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMMPQKI*VPSKYG
Trigger: ACCATACTTTGAGGGTACGCAGATTTTCTGAGGCAT...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR GCA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTATGAAGTTCCTGGTATaGAATGGCAGCTTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: SNIQKSLSAANMYRNISSMKFLV*NGSFSW
Trigger: CCAAGAGAAGCTGCCATTGCATACCAGGAACTTCAT...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR GCA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTCTATTGCAAGGACCTTaGCCTTGCACAGTTTCAAAG +
Preference number: 4 (lower is better)
Translates to: SNIQKSLSAANMYRNISSLLQGP*PCTVSK
Trigger: CTTTGAAACTGTGCAAGGGCAAGGTCCTTGCAATAG...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
CDS-3UTR GCA 90 bp CCCCAGGCAATCCAAGTTCAATGTAAGTTTTTACTAATCGGAGATCTGCACTGTCCATTAGTTCATCTCTaGTTGTATAGTGAGCATTTA +
Preference number: 4 (lower is better)
Translates to: PQAIQVQCKFLLIGDLHCPLVHL*LYSEHL
Trigger: TAAATGCTCACTATACAAGCAGAGATGAACTAATGG...ACAGTGCAGATCTCCGATTAGTAAAAACTTACATTGAACTTGGATTGCCTGGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS-3UTR GCA 90 bp ACTTACAAAAACCTCTGTCTGTCACAATTAGTGAGTGCAAACAGAACTTCTACCCTTCAGTTCTTCTTTTaGCTGAAGGAAGGCTTGTAT +
Preference number: 4 (lower is better)
Translates to: TYKNLCLSQLVSANRTSTLQFFF*LKEGLY
Trigger: ATACAAGCCTTCCTTCAGGCAAAAGAAGAACTGAAG...GGTAGAAGTTCTGTTTGCACTCACTAATTGTGACAGACAGAGGTTTTTGTAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000194672.11
ENST00000370479.7
ENST00000418814.7
CDS-3UTR GCA 90 bp CAGCACATGTGTCAGAAATATCCGTACTGCTTTGAGAACCAAAATAATTTTCCATCTCGACATGTCAGCTaGAAAAGCGAACCTGATTTT +
Preference number: 4 (lower is better)
Translates to: QHMCQKYPYCFENQNNFPSRHVS*KSEPDF
Trigger: AAAATCAGGTTCGCTTTTGCAGCTGACATGTCGAGA...TGGAAAATTATTTTGGTTCTCAAAGCAGTACGGATATTTCTGACACATGTGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS-3UTR GCA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGTCTCGACATGTCAGCTaGAAAAGCGAACCTGATTTT +
Preference number: 4 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMSRHVS*KSEPDF
Trigger: AAAATCAGGTTCGCTTTTGCAGCTGACATGTCGAGA...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR GCA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTCCAAATTACAGTCCTTaGTTTGCAGAACGGGTCGAA +
Preference number: 4 (lower is better)
Translates to: SNIQKSLSAANMYRNISSPNYSP*FAERVE
Trigger: TTCGACCCGTTCTGCAAAGCAAGGACTGTAATTTGG...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR GCA 90 bp ACTTACAAAAACCTCTGTCTGTCACAATTAGTGAGTGCAAACAGAACTTCTACCAGCTGTATTGGGCAATaGATTGATGACATTATAGCG +
Preference number: 4 (lower is better)
Translates to: TYKNLCLSQLVSANRTSTSCIGQ*IDDIIA
Trigger: CGCTATAATGTCATCAATGCATTGCCCAATACAGCT...GGTAGAAGTTCTGTTTGCACTCACTAATTGTGACAGACAGAGGTTTTTGTAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000194672.11
ENST00000370479.7
ENST00000418814.7
CDS-3UTR GCA 90 bp TCTGGATGCCAGATTGTGTTCCATTTGTGTAATTTCACTATCGTCCTGGGAGATTCAAAAATCTTTATCTaGTGCCAACATGTACAGGAA +
Preference number: 4 (lower is better)
Translates to: SGCQIVFHLCNFTIVLGDSKIFI*CQHVQE
Trigger: TTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGA...ATCTCCCAGGACGATAGTGAAATTACACAAATGGAACACAATCTGGCATCCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS-3UTR GCA 90 bp ACTTACAAAAACCTCTGTCTGTCACAATTAGTGAGTGCAAACAGAACTTCTACCCGGCTACTTATTAGTTaGAAGGCATTCAGATCATCT +
Preference number: 4 (lower is better)
Translates to: TYKNLCLSQLVSANRTSTRLLIS*KAFRSS
Trigger: AGATGATCTGAATGCCTTGCAACTAATAAGTAGCCG...GGTAGAAGTTCTGTTTGCACTCACTAATTGTGACAGACAGAGGTTTTTGTAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370479.7
ENST00000418814.7
CDS-3UTR GCA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTTGGGCTAGAAAGTCCTaGTACAGAGCTTTCTTCAGT +
Preference number: 4 (lower is better)
Translates to: SNIQKSLSAANMYRNISSWARKS*YRAFFS
Trigger: ACTGAAGAAAGCTCTGTAGCAGGACTTTCTAGCCCA...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370479.7
ENST00000418814.7
CDS-3UTR GCA 90 bp AAAGCGAGGTACAGCAGAACATATGACAAGGATGACTACAATTGTCAATCCCATCACAAAGATTTAGGTTaGCAGAGTTCAAAGGATCAA +
Preference number: 4 (lower is better)
Translates to: KARYSRTYDKDDYNCQSHHKDLG*QSSKDQ
Trigger: TTGATCCTTTGAACTCTGGCAACCTAAATCTTTGTG...ATGGGATTGACAATTGTAGTCATCCTTGTCATATGTTCTGCTGTACCTCGCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR CCA 90 bp ACTTACAAAAACCTCTGTCTGTCACAATTAGTGAGTGCAAACAGAACTTCTACCAGGCTAGCAGCAAAGTaGCACAAAGTGTATAATGAA +
Preference number: 4 (lower is better)
Translates to: TYKNLCLSQLVSANRTSTRLAAK*HKVYNE
Trigger: TTCATTATACACTTTGTGCCACTTTGCTGCTAGCCT...GGTAGAAGTTCTGTTTGCACTCACTAATTGTGACAGACAGAGGTTTTTGTAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000194672.11
ENST00000370479.7
ENST00000418814.7
CDS-3UTR CCA 90 bp ACTTACAAAAACCTCTGTCTGTCACAATTAGTGAGTGCAAACAGAACTTCTACCCGTACCCTCAAAGTATaGTGCTCTTGTGCTAATAAT +
Preference number: 4 (lower is better)
Translates to: TYKNLCLSQLVSANRTSTRTLKV*CSCANN
Trigger: ATTATTAGCACAAGAGCACCATACTTTGAGGGTACG...GGTAGAAGTTCTGTTTGCACTCACTAATTGTGACAGACAGAGGTTTTTGTAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000194672.11
ENST00000370479.7
ENST00000418814.7
CDS-3UTR CCA 90 bp AAGTGCATTGCTGTAGCTAACAGCACATGTGTCAGAAATATCCGTACTGCTTTGCTAAGGACTCAAAGTTaGGTAGTAAATTATCCACAA +
Preference number: 4 (lower is better)
Translates to: KCIAVANSTCVRNIRTALLRTQS*VVNYPQ
Trigger: TTGTGGATAATTTACTACCCAACTTTGAGTCCTTAG...CAAAGCAGTACGGATATTTCTGACACATGTGCTGTTAGCTACAGCAATGCACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS-3UTR CCA 90 bp TCTGGATGCCAGATTGTGTTCCATTTGTGTAATTTCACTATCGTCCTGGGAGATTTGCTATCATTTAGATaGCATTCAGGTACAACAGAT +
Preference number: 4 (lower is better)
Translates to: SGCQIVFHLCNFTIVLGDLLSFR*HSGTTD
Trigger: ATCTGTTGTACCTGAATGCCATCTAAATGATAGCAA...ATCTCCCAGGACGATAGTGAAATTACACAAATGGAACACAATCTGGCATCCAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS-3UTR CCA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGGTAAGAAGTACTGCTTaGCTGCTTTGTAATGGCATC +
Preference number: 4 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMVRSTA*LLCNGI
Trigger: GATGCCATTACAAAGCAGCCAAGCAGTACTTCTTAC...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR CCA 90 bp ACTTACAAAAACCTCTGTCTGTCACAATTAGTGAGTGCAAACAGAACTTCTACCTCTCTCTGTATTAGTTaGCAAACAGCTAGCTTCCTT +
Preference number: 4 (lower is better)
Translates to: TYKNLCLSQLVSANRTSTSLCIS*QTASFL
Trigger: AAGGAAGCTAGCTGTTTGCCAACTAATACAGAGAGA...GGTAGAAGTTCTGTTTGCACTCACTAATTGTGACAGACAGAGGTTTTTGTAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370479.7
ENST00000418814.7
CDS-3UTR TCA 90 bp CTCAAAGTATGGTGCTCTTGTGCTAATAATATTCTTAGTTCTTCGTGTAGCGTTGCAACCAATGATGCATaGAGAATAATCTCCATCTGT +
Preference number: 4 (lower is better)
Translates to: LKVWCSCANNILSSSCSVATNDA*RIISIC
Trigger: ACAGATGGAGATTATTCTTCATGCATCATTGGTTGC...AACGCTACACGAAGAACTAAGAATATTATTAGCACAAGAGCACCATACTTTGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS-3UTR TCA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTGCCAGTTCTAGTTTCTaGCAAGAAGGAATCTCTTCT +
Preference number: 4 (lower is better)
Translates to: SNIQKSLSAANMYRNISSASSSF*QEGISS
Trigger: AGAAGAGATTCCTTCTTGTCAGAAACTAGAACTGGC...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000194672.11
ENST00000457062.6
CDS-3UTR TCA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTTCCAAGGTCCTAGTTTaGCAGTTATATTCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: SNIQKSLSAANMYRNISSSKVLV*QLYSLH
Trigger: GTGGAGAGAATATAACTGTCAAACTAGGACCTTGGA...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR TCA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTATTGTCCAAGTTCCCTaGAAATACAACACTCTGCTG +
Preference number: 4 (lower is better)
Translates to: SNIQKSLSAANMYRNISSIVQVP*KYNTLL
Trigger: CAGCAGAGTGTTGTATTTTCAGGGAACTTGGACAAT...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
CDS-3UTR TCA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAAATGGAACCTGAAATaGCACAAGGAGTGCCTAAAC +
Preference number: 4 (lower is better)
Translates to: SNIQKSLSAANMYRNISSKWNLK*HKECLN
Trigger: GTTTAGGCACTCCTTGTGTCATTTCAGGTTCCATTT...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR TCA 90 bp ACTTACAAAAACCTCTGTCTGTCACAATTAGTGAGTGCAAACAGAACTTCTACCAACTGTAGGGATTTCTaGATACATCTGTGTGAGATT +
Preference number: 4 (lower is better)
Translates to: TYKNLCLSQLVSANRTSTNCRDF*IHLCEI
Trigger: AATCTCACACAGATGTATTCAGAAATCCCTACAGTT...GGTAGAAGTTCTGTTTGCACTCACTAATTGTGACAGACAGAGGTTTTTGTAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000194672.11
ENST00000370479.7
ENST00000418814.7
CDS-3UTR TCA 90 bp CAGCACATGTGTCAGAAATATCCGTACTGCTTTGAGAACCAAAATAATTTTCCATCACTTGTACCCAGATaGGTTTCACTTTCAACTGTA +
Preference number: 4 (lower is better)
Translates to: QHMCQKYPYCFENQNNFPSLVPR*VSLSTV
Trigger: TACAGTTGAAAGTGAAACTCATCTGGGTACAAGTGA...TGGAAAATTATTTTGGTTCTCAAAGCAGTACGGATATTTCTGACACATGTGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS-3UTR TCA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGTCACTTGTACCCAGATaGGTTTCACTTTCAACTGTA +
Preference number: 4 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMSLVPR*VSLSTV
Trigger: TACAGTTGAAAGTGAAACTCATCTGGGTACAAGTGA...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR TCA 90 bp TTGTCAATCCCATTAATTCAGAGGAAATCAAAGTATGAACTACTTCTGAGGCAGTCACTTGTACCCAGATaGGTTTCACTTTCAACTGTA +
Preference number: 4 (lower is better)
Translates to: LSIPLIQRKSKYELLLRQSLVPR*VSLSTV
Trigger: TACAGTTGAAAGTGAAACTCATCTGGGTACAAGTGA...CTGCCTCAGAAGTAGTTCATACTTTGATTTCCTCTGAATTAATGGGATTGACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR TCA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGTATATCAGTACTGGCTaGAAAAGGATCACTTGTACC +
Preference number: 4 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMYISTG*KRITCT
Trigger: GGTACAAGTGATCCTTTTTCAGCCAGTACTGATATA...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR TCA 90 bp TTGTCAATCCCATTAATTCAGAGGAAATCAAAGTATGAACTACTTCTGAGGCAGTATATCAGTACTGGCTaGAAAAGGATCACTTGTACC +
Preference number: 4 (lower is better)
Translates to: LSIPLIQRKSKYELLLRQYISTG*KRITCT
Trigger: GGTACAAGTGATCCTTTTTCAGCCAGTACTGATATA...CTGCCTCAGAAGTAGTTCATACTTTGATTTCCTCTGAATTAATGGGATTGACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR TCA 90 bp TCAGAAAATCTGCGTACCCTCAAAGTATGGTGCTCTTGTGCTAATAATATTCTTAGGAAATCGAAGAAGTaGAGTTGTAAGAAGTACTGC +
Preference number: 4 (lower is better)
Translates to: SENLRTLKVWCSCANNILRKSKK*SCKKYC
Trigger: GCAGTACTTCTTACAACTTCACTTCTTCGATTTCCT...AAGAATATTATTAGCACAAGAGCACCATACTTTGAGGGTACGCAGATTTTCTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS-3UTR TCA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGAGGAAATCGAAGAAGTaGAGTTGTAAGAAGTACTGC +
Preference number: 4 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMRKSKK*SCKKYC
Trigger: GCAGTACTTCTTACAACTTCACTTCTTCGATTTCCT...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR TCA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTGTTTGTGGACTGCTTTaGGATTCCAGAACCAAATAC +
Preference number: 4 (lower is better)
Translates to: SNIQKSLSAANMYRNISSVCGLL*DSRTKY
Trigger: GTATTTGGTTCTGGAATCTCAAAGCAGTCCACAAAC...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361499.7
ENST00000418814.7
ENST00000505769.5
CDS-3UTR TCA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTGCAACCAATGATGCATaGACTGTAACAGACACAACA +
Preference number: 4 (lower is better)
Translates to: SNIQKSLSAANMYRNISSATNDA*TVTDTT
Trigger: TGTTGTGTCTGTTACAGTTCATGCATCATTGGTTGC...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR TCA 90 bp ACTTACAAAAACCTCTGTCTGTCACAATTAGTGAGTGCAAACAGAACTTCTACCCATTTTACTGGACTCTaGTCTCTGAAGATTCTGAAT +
Preference number: 4 (lower is better)
Translates to: TYKNLCLSQLVSANRTSTHFTGL*SLKILN
Trigger: ATTCAGAATCTTCAGAGATCAGAGTCCAGTAAAATG...GGTAGAAGTTCTGTTTGCACTCACTAATTGTGACAGACAGAGGTTTTTGTAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370479.7
ENST00000418814.7
CDS-3UTR TCA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTTCTGATAACAGCACCTaGCACAGACAACATAAGGAA +
Preference number: 4 (lower is better)
Translates to: SNIQKSLSAANMYRNISSSDNST*HRQHKE
Trigger: TTCCTTATGTTGTCTGTGTCAGGTGCTGTTATCAGA...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505769.5
CDS-3UTR GCA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGGTCATACCTGTTGCATaGAACAAACTAGCTTCTACT +
Preference number: 4 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMVIPVA*NKLAST
Trigger: AGTAGAAGCTAGTTTGTTGCATGCAACAGGTATGAC...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000505769.5
CDS-3UTR GCA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGATAATCTTTCACTATTaGAAGGACCTTGCCCTTGCA +
Preference number: 4 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMIIFHY*KDLALA
Trigger: TGCAAGGGCAAGGTCCTTGCAATAGTGAAAGATTAT...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
CDS-3UTR GCA 90 bp GGGCTAAGCCACTTAGTATCTCTGGGCTTTAGTTATAAAATGAGTAAACAGGACCCATTAGTTCATCTCTaGTTGTATAGTGAGCATTTA +
Preference number: 4 (lower is better)
Translates to: GLSHLVSLGFSYKMSKQDPLVHL*LYSEHL
Trigger: TAAATGCTCACTATACAAGCAGAGATGAACTAATGG...GTCCTGTTTACTCATTTTATAACTAAAGCCCAGAGATACTAAGTGGCTTAGCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR GCA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGGAAGTACTGCTTGGCTaGTTTGTAATGGCATCAAAT +
Preference number: 4 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMEVLLG*FVMASN
Trigger: ATTTGATGCCATTACAAAGCAGCCAAGCAGTACTTC...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR GCA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGCTTCAGTTCTTCTTTTaGCTGAAGGAAGGCTTGTAT +
Preference number: 4 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMLQFFF*LKEGLY
Trigger: ATACAAGCCTTCCTTCAGGCAAAAGAAGAACTGAAG...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR GCA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTTCTCGACATGTCAGCTaGAAAAGCGAACCTGATTTT +
Preference number: 4 (lower is better)
Translates to: SNIQKSLSAANMYRNISSSRHVS*KSEPDF
Trigger: AAAATCAGGTTCGCTTTTGCAGCTGACATGTCGAGA...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR GCA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGAGCTGTATTGGGCAATaGATTGATGACATTATAGCG +
Preference number: 4 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMSCIGQ*IDDIIA
Trigger: CGCTATAATGTCATCAATGCATTGCCCAATACAGCT...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR GCA 90 bp ACTTACAAAAACCTCTGTCTGTCACAATTAGTGAGTGCAAACAGAACTTCTACCAATTTGTTTGTGGACTaGTTTGAGATTCCAGAACCA +
Preference number: 4 (lower is better)
Translates to: TYKNLCLSQLVSANRTSTNLFVD*FEIPEP
Trigger: TGGTTCTGGAATCTCAAAGCAGTCCACAAACAAATT...GGTAGAAGTTCTGTTTGCACTCACTAATTGTGACAGACAGAGGTTTTTGTAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418814.7
CDS-3UTR GCA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGCGGCTACTTATTAGTTaGAAGGCATTCAGATCATCT +
Preference number: 4 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMRLLIS*KAFRSS
Trigger: AGATGATCTGAATGCCTTGCAACTAATAAGTAGCCG...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR CCA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGCTAGCTTCTACTCTGTaGGGAATTCTTGATGGAATT +
Preference number: 4 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMLASTL*GILDGI
Trigger: AATTCCATCAAGAATTCCCCACAGAGTAGAAGCTAG...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000505769.5
CDS-3UTR CCA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGAGGCTAGCAGCAAAGTaGCACAAAGTGTATAATGAA +
Preference number: 4 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMRLAAK*HKVYNE
Trigger: TTCATTATACACTTTGTGCCACTTTGCTGCTAGCCT...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR CCA 90 bp TTGTCAATCCCATTAATTCAGAGGAAATCAAAGTATGAACTACTTCTGAGGCAGCGTACCCTCAAAGTATaGTGCTCTTGTGCTAATAAT +
Preference number: 4 (lower is better)
Translates to: LSIPLIQRKSKYELLLRQRTLKV*CSCANN
Trigger: ATTATTAGCACAAGAGCACCATACTTTGAGGGTACG...CTGCCTCAGAAGTAGTTCATACTTTGATTTCCTCTGAATTAATGGGATTGACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR CCA 90 bp ACTTACAAAAACCTCTGTCTGTCACAATTAGTGAGTGCAAACAGAACTTCTACCATTTCACTATCGTCCTaGGAGATATCAAGTTTACCT +
Preference number: 4 (lower is better)
Translates to: TYKNLCLSQLVSANRTSTISLSS*EISSLP
Trigger: AGGTAAACTTGATATCTCCCAGGACGATAGTGAAAT...GGTAGAAGTTCTGTTTGCACTCACTAATTGTGACAGACAGAGGTTTTTGTAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000194672.11
ENST00000370479.7
ENST00000418814.7
CDS-3UTR CCA 90 bp ACTTACAAAAACCTCTGTCTGTCACAATTAGTGAGTGCAAACAGAACTTCTACCGATTTATCAGGACTCTaGAAGCCTTTACACATAGTA +
Preference number: 4 (lower is better)
Translates to: TYKNLCLSQLVSANRTSTDLSGL*KPLHIV
Trigger: TACTATGTGTAAAGGCTTCCAGAGTCCTGATAAATC...GGTAGAAGTTCTGTTTGCACTCACTAATTGTGACAGACAGAGGTTTTTGTAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000194672.11
ENST00000370479.7
ENST00000418814.7
CDS-3UTR CCA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTGTAAGAAGTACTGCTTaGCTGCTTTGTAATGGCATC +
Preference number: 4 (lower is better)
Translates to: SNIQKSLSAANMYRNISSVRSTA*LLCNGI
Trigger: GATGCCATTACAAAGCAGCCAAGCAGTACTTCTTAC...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR CCA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGGGAAGAATTTGTTTGTaGACTGCTTTGAGATTCCAG +
Preference number: 4 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMGRICL*TALRFQ
Trigger: CTGGAATCTCAAAGCAGTCCACAAACAAATTCTTCC...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361499.7
ENST00000418814.7
ENST00000505769.5
CDS-3UTR TCA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGAATAATCTCCATCTGTaGAGTGTAGATCCAAGGATA +
Preference number: 4 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMNNLHL*SVDPRI
Trigger: TATCCTTGGATCTACACTTCACAGATGGAGATTATT...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR TCA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGCCACTTACTACAACATaGTATTCTTTTGTAGAAGGG +
Preference number: 4 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMPLTTT*YSFVEG
Trigger: CCCTTCTACAAAAGAATATCATGTTGTAGTAAGTGG...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
CDS-3UTR TCA 90 bp TTGTCAATCCCATTAATTCAGAGGAAATCAAAGTATGAACTACTTCTGAGGCAGCCACTTACTACAACATaGTATTCTTTTGTAGAAGGG +
Preference number: 4 (lower is better)
Translates to: LSIPLIQRKSKYELLLRQPLTTT*YSFVEG
Trigger: CCCTTCTACAAAAGAATATCATGTTGTAGTAAGTGG...CTGCCTCAGAAGTAGTTCATACTTTGATTTCCTCTGAATTAATGGGATTGACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR TCA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGAACTGTAGGGATTTCTaGATACATCTGTGTGAGATT +
Preference number: 4 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMNCRDF*IHLCEI
Trigger: AATCTCACACAGATGTATTCAGAAATCCCTACAGTT...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR TCA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTTCACTTGTACCCAGATaGGTTTCACTTTCAACTGTA +
Preference number: 4 (lower is better)
Translates to: SNIQKSLSAANMYRNISSSLVPR*VSLSTV
Trigger: TACAGTTGAAAGTGAAACTCATCTGGGTACAAGTGA...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR TCA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAGGAAATCGAAGAAGTaGAGTTGTAAGAAGTACTGC +
Preference number: 4 (lower is better)
Translates to: SNIQKSLSAANMYRNISSRKSKK*SCKKYC
Trigger: GCAGTACTTCTTACAACTTCACTTCTTCGATTTCCT...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR TCA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTGAACTTCACTGTACATaGACCCAGGAAGTTTTAGTA +
Preference number: 4 (lower is better)
Translates to: SNIQKSLSAANMYRNISSELHCT*TQEVLV
Trigger: TACTAAAACTTCCTGGGTTCATGTACAGTGAAGTTC...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR TCA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGCTAGCACAACATTTTTaGAATAATGAAGCCCTGCTT +
Preference number: 4 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMLAQHF*NNEALL
Trigger: AAGCAGGGCTTCATTATTTCAAAAATGTTGTGCTAG...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR TCA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTACTATTGGAAATATTTaGGGGCAGCAACCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: SNIQKSLSAANMYRNISSTIGNI*GQQPER
Trigger: TCTTTCTGGTTGCTGCCCTCAAATATTTCCAATAGT...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR TCA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGCATTTTACTGGACTCTaGTCTCTGAAGATTCTGAAT +
Preference number: 4 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMHFTGL*SLKILN
Trigger: ATTCAGAATCTTCAGAGATCAGAGTCCAGTAAAATG...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370479.7
ENST00000418814.7
CDS-3UTR GCA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTGTCATACCTGTTGCATaGAACAAACTAGCTTCTACT +
Preference number: 4 (lower is better)
Translates to: SNIQKSLSAANMYRNISSVIPVA*NKLAST
Trigger: AGTAGAAGCTAGTTTGTTGCATGCAACAGGTATGAC...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000505769.5
CDS-3UTR GCA 90 bp ACTTACAAAAACCTCTGTCTGTCACAATTAGTGAGTGCAAACAGAACTTCTACCCATATTTATAAGTTCTaGCAGTTCATCAGGATTCTC +
Preference number: 4 (lower is better)
Translates to: TYKNLCLSQLVSANRTSTHIYKF*QFIRIL
Trigger: GAGAATCCTGATGAACTGGCAGAACTTATAAATATG...GGTAGAAGTTCTGTTTGCACTCACTAATTGTGACAGACAGAGGTTTTTGTAAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000194672.11
ENST00000370479.7
ENST00000418814.7
CDS-3UTR GCA 90 bp GCAAAGTTGCGCAAGATTCATATTTATAAGTTCTGCCAGTTCATCAGGATTCTCACCCTCAAAGTATGGTaGTCTTGTGCTAATAATATT +
Preference number: 4 (lower is better)
Translates to: AKLRKIHIYKFCQFIRILTLKVW*SCANNI
Trigger: AATATTATTAGCACAAGAGCACCATACTTTGAGGGT...GAGAATCCTGATGAACTGGCAGAACTTATAAATATGAATCTTGCGCAACTTTGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS-3UTR GCA 90 bp ACTTACAAAAACCTCTGTCTGTCACAATTAGTGAGTGCAAACAGAACTTCTACCACCCTCAAAGTATGGTaGTCTTGTGCTAATAATATT +
Preference number: 4 (lower is better)
Translates to: TYKNLCLSQLVSANRTSTTLKVW*SCANNI
Trigger: AATATTATTAGCACAAGAGCACCATACTTTGAGGGT...GGTAGAAGTTCTGTTTGCACTCACTAATTGTGACAGACAGAGGTTTTTGTAAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000194672.11
ENST00000370479.7
ENST00000418814.7
CDS-3UTR GCA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTATAATCTTTCACTATTaGAAGGACCTTGCCCTTGCA +
Preference number: 4 (lower is better)
Translates to: SNIQKSLSAANMYRNISSIIFHY*KDLALA
Trigger: TGCAAGGGCAAGGTCCTTGCAATAGTGAAAGATTAT...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
CDS-3UTR GCA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGACAACACTCTGCTGTTaGAAAGTGATACTTGACTTT +
Preference number: 4 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMTTLCC*KVILDF
Trigger: AAAGTCAAGTATCACTTTGCAACAGCAGAGTGTTGT...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
CDS-3UTR GCA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGTTTTCCACAAGCCCTTaGTTTACTATATCAGTACTG +
Preference number: 4 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMFSTSP*FTISVL
Trigger: CAGTACTGATATAGTAAAGCAAGGGCTTGTGGAAAA...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR GCA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTGAAGTACTGCTTGGCTaGTTTGTAATGGCATCAAAT +
Preference number: 4 (lower is better)
Translates to: SNIQKSLSAANMYRNISSEVLLG*FVMASN
Trigger: ATTTGATGCCATTACAAAGCAGCCAAGCAGTACTTC...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR GCA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTCTTCAGTTCTTCTTTTaGCTGAAGGAAGGCTTGTAT +
Preference number: 4 (lower is better)
Translates to: SNIQKSLSAANMYRNISSLQFFF*LKEGLY
Trigger: ATACAAGCCTTCCTTCAGGCAAAAGAAGAACTGAAG...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR GCA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAGCTGTATTGGGCAATaGATTGATGACATTATAGCG +
Preference number: 4 (lower is better)
Translates to: SNIQKSLSAANMYRNISSSCIGQ*IDDIIA
Trigger: CGCTATAATGTCATCAATGCATTGCCCAATACAGCT...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR GCA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTCGGCTACTTATTAGTTaGAAGGCATTCAGATCATCT +
Preference number: 4 (lower is better)
Translates to: SNIQKSLSAANMYRNISSRLLIS*KAFRSS
Trigger: AGATGATCTGAATGCCTTGCAACTAATAAGTAGCCG...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR GCA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGCACAAAGATTTAGGTTaGCAGAGTTCAAAGGATCAA +
Preference number: 4 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMHKDLG*QSSKDQ
Trigger: TTGATCCTTTGAACTCTGGCAACCTAAATCTTTGTG...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370479.7
ENST00000418814.7
CDS-3UTR CCA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTCTAGCTTCTACTCTGTaGGGAATTCTTGATGGAATT +
Preference number: 4 (lower is better)
Translates to: SNIQKSLSAANMYRNISSLASTL*GILDGI
Trigger: AATTCCATCAAGAATTCCCCACAGAGTAGAAGCTAG...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000505769.5
CDS-3UTR CCA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAGGCTAGCAGCAAAGTaGCACAAAGTGTATAATGAA +
Preference number: 4 (lower is better)
Translates to: SNIQKSLSAANMYRNISSRLAAK*HKVYNE
Trigger: TTCATTATACACTTTGTGCCACTTTGCTGCTAGCCT...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR CCA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTTCCATTTCCTCTAGATaGTTGTCTTTCTGTGTTCGT +
Preference number: 4 (lower is better)
Translates to: SNIQKSLSAANMYRNISSSISSR*LSFCVR
Trigger: ACGAACACAGAAAGACAACCATCTAGAGGAAATGGA...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000194672.11
ENST00000457062.6
CDS-3UTR CCA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTCGTACCCTCAAAGTATaGTGCTCTTGTGCTAATAAT +
Preference number: 4 (lower is better)
Translates to: SNIQKSLSAANMYRNISSRTLKV*CSCANN
Trigger: ATTATTAGCACAAGAGCACCATACTTTGAGGGTACG...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR CCA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGATTTCACTATCGTCCTaGGAGATATCAAGTTTACCT +
Preference number: 4 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMISLSS*EISSLP
Trigger: AGGTAAACTTGATATCTCCCAGGACGATAGTGAAAT...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR CCA 90 bp ACTTACAAAAACCTCTGTCTGTCACAATTAGTGAGTGCAAACAGAACTTCTACCCTAAGGACTCAAAGTTaGGTAGTAAATTATCCACAA +
Preference number: 4 (lower is better)
Translates to: TYKNLCLSQLVSANRTSTLRTQS*VVNYPQ
Trigger: TTGTGGATAATTTACTACCCAACTTTGAGTCCTTAG...GGTAGAAGTTCTGTTTGCACTCACTAATTGTGACAGACAGAGGTTTTTGTAAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000194672.11
ENST00000370479.7
ENST00000418814.7
CDS-3UTR CCA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGGATTTATCAGGACTCTaGAAGCCTTTACACATAGTA +
Preference number: 4 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMDLSGL*KPLHIV
Trigger: TACTATGTGTAAAGGCTTCCAGAGTCCTGATAAATC...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR CCA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTTCTCTCTGTATTAGTTaGCAAACAGCTAGCTTCCTT +
Preference number: 4 (lower is better)
Translates to: SNIQKSLSAANMYRNISSSLCIS*QTASFL
Trigger: AAGGAAGCTAGCTGTTTGCCAACTAATACAGAGAGA...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370479.7
ENST00000418814.7
CDS-3UTR TCA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAATCTCCATCTGTaGAGTGTAGATCCAAGGATA +
Preference number: 4 (lower is better)
Translates to: SNIQKSLSAANMYRNISSNNLHL*SVDPRI
Trigger: TATCCTTGGATCTACACTTCACAGATGGAGATTATT...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR TCA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTCCACTTACTACAACATaGTATTCTTTTGTAGAAGGG +
Preference number: 4 (lower is better)
Translates to: SNIQKSLSAANMYRNISSPLTTT*YSFVEG
Trigger: CCCTTCTACAAAAGAATATCATGTTGTAGTAAGTGG...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
CDS-3UTR TCA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAACTGTAGGGATTTCTaGATACATCTGTGTGAGATT +
Preference number: 4 (lower is better)
Translates to: SNIQKSLSAANMYRNISSNCRDF*IHLCEI
Trigger: AATCTCACACAGATGTATTCAGAAATCCCTACAGTT...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR TCA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTCTAGCACAACATTTTTaGAATAATGAAGCCCTGCTT +
Preference number: 4 (lower is better)
Translates to: SNIQKSLSAANMYRNISSLAQHF*NNEALL
Trigger: AAGCAGGGCTTCATTATTTCAAAAATGTTGTGCTAG...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR GCA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGCATATTTATAAGTTCTaGCAGTTCATCAGGATTCTC +
Preference number: 4 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMHIYKF*QFIRIL
Trigger: GAGAATCCTGATGAACTGGCAGAACTTATAAATATG...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR GCA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGACCCTCAAAGTATGGTaGTCTTGTGCTAATAATATT +
Preference number: 4 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMTLKVW*SCANNI
Trigger: AATATTATTAGCACAAGAGCACCATACTTTGAGGGT...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR GCA 90 bp TTGTCAATCCCATTAATTCAGAGGAAATCAAAGTATGAACTACTTCTGAGGCAGACCCTCAAAGTATGGTaGTCTTGTGCTAATAATATT +
Preference number: 4 (lower is better)
Translates to: LSIPLIQRKSKYELLLRQTLKVW*SCANNI
Trigger: AATATTATTAGCACAAGAGCACCATACTTTGAGGGT...CTGCCTCAGAAGTAGTTCATACTTTGATTTCCTCTGAATTAATGGGATTGACAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR GCA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTACAACACTCTGCTGTTaGAAAGTGATACTTGACTTT +
Preference number: 4 (lower is better)
Translates to: SNIQKSLSAANMYRNISSTTLCC*KVILDF
Trigger: AAAGTCAAGTATCACTTTGCAACAGCAGAGTGTTGT...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
CDS-3UTR GCA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTTTTTCCACAAGCCCTTaGTTTACTATATCAGTACTG +
Preference number: 4 (lower is better)
Translates to: SNIQKSLSAANMYRNISSFSTSP*FTISVL
Trigger: CAGTACTGATATAGTAAAGCAAGGGCTTGTGGAAAA...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR GCA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGTCAAAAATCTTTATCTaGTGCCAACATGTACAGGAA +
Preference number: 4 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMSKIFI*CQHVQE
Trigger: TTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGA...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR GCA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATTTGTTTGTGGACTaGTTTGAGATTCCAGAACCA +
Preference number: 4 (lower is better)
Translates to: SNIQKSLSAANMYRNISSNLFVD*FEIPEP
Trigger: TGGTTCTGGAATCTCAAAGCAGTCCACAAACAAATT...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361499.7
ENST00000418814.7
ENST00000505769.5
CDS-3UTR GCA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTCACAAAGATTTAGGTTaGCAGAGTTCAAAGGATCAA +
Preference number: 4 (lower is better)
Translates to: SNIQKSLSAANMYRNISSHKDLG*QSSKDQ
Trigger: TTGATCCTTTGAACTCTGGCAACCTAAATCTTTGTG...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370479.7
ENST00000418814.7
CDS-3UTR CCA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTATTTCACTATCGTCCTaGGAGATATCAAGTTTACCT +
Preference number: 4 (lower is better)
Translates to: SNIQKSLSAANMYRNISSISLSS*EISSLP
Trigger: AGGTAAACTTGATATCTCCCAGGACGATAGTGAAAT...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR CCA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGCTAAGGACTCAAAGTTaGGTAGTAAATTATCCACAA +
Preference number: 4 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMLRTQS*VVNYPQ
Trigger: TTGTGGATAATTTACTACCCAACTTTGAGTCCTTAG...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR CCA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGTTGCTATCATTTAGATaGCATTCAGGTACAACAGAT +
Preference number: 4 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMLLSFR*HSGTTD
Trigger: ATCTGTTGTACCTGAATGCCATCTAAATGATAGCAA...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
CDS-3UTR CCA 90 bp CTCAAAGTATGGTGCTCTTGTGCTAATAATATTCTTAGTTCTTCGTGTAGCGTTTACTTTTCACATCACTaGAAGTCTCTTCATCTGAAA +
Preference number: 4 (lower is better)
Translates to: LKVWCSCANNILSSSCSVYFSHH*KSLHLK
Trigger: TTTCAGATGAAGAGACTTCCAGTGATGTGAAAAGTA...AACGCTACACGAAGAACTAAGAATATTATTAGCACAAGAGCACCATACTTTGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS-3UTR CCA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGTACTTTTCACATCACTaGAAGTCTCTTCATCTGAAA +
Preference number: 4 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMYFSHH*KSLHLK
Trigger: TTTCAGATGAAGAGACTTCCAGTGATGTGAAAAGTA...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
CDS-3UTR CCA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTGATTTATCAGGACTCTaGAAGCCTTTACACATAGTA +
Preference number: 4 (lower is better)
Translates to: SNIQKSLSAANMYRNISSDLSGL*KPLHIV
Trigger: TACTATGTGTAAAGGCTTCCAGAGTCCTGATAAATC...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR CCA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGAGGATCAAACTGGTCTaGTTGAACATTTTCAATATC +
Preference number: 4 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMRIKLV*LNIFNI
Trigger: GATATTGAAAATGTTCAACCAGACCAGTTTGATCCT...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370479.7
ENST00000418814.7
3UTR CAA 72 bp AACCTTGGCCTTGTAAGCACTGAACGAATTATTAAATaGCCCAACGAATGTCCAATAAAGCTTATTTTTGAG +
Preference number: 4 (lower is better)
Translates to: NLGLVSTERIIK*PNECPIKLIFE
Trigger: CTCAAAAATAAGCTTTATTGGACATTCGTTGGGCAATTTAATAATTCGTTCAGTGCTTACAAGGCCAAGGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000194672.11
3UTR CAA 72 bp TTTGGCAAATCAGTCGTTCCTAGATTTAATACAGTTTaGCTATCATTTAGATGGCATTCAGGTACAACAGAT +
Preference number: 4 (lower is better)
Translates to: FGKSVVPRFNTV*LSFRWHSGTTD
Trigger: ATCTGTTGTACCTGAATGCCATCTAAATGATAGCAAAACTGTATTAAATCTAGGAACGACTGATTTGCCAAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000194672.11
3UTR CAA 72 bp CCATTAGTTCATCTCTGCTTGTATAGTGAGCATTTATaGTTCCATCCAAAGCTGAATAATCTGTTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: PLVHLCLYSEHL*FHPKLNNLFLH
Trigger: ATGAAGAAACAGATTATTCAGCTTTGGATGGAACAATAAATGCTCACTATACAAGCAGAGATGAACTAATGG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS-3UTR GCA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTACCCTCAAAGTATGGTaGTCTTGTGCTAATAATATT +
Preference number: 4 (lower is better)
Translates to: SNIQKSLSAANMYRNISSTLKVW*SCANNI
Trigger: AATATTATTAGCACAAGAGCACCATACTTTGAGGGT...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR GCA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTCCATTAGTTCATCTCTaGTTGTATAGTGAGCATTTA +
Preference number: 4 (lower is better)
Translates to: SNIQKSLSAANMYRNISSPLVHL*LYSEHL
Trigger: TAAATGCTCACTATACAAGCAGAGATGAACTAATGG...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR GCA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTTCAAAAATCTTTATCTaGTGCCAACATGTACAGGAA +
Preference number: 4 (lower is better)
Translates to: SNIQKSLSAANMYRNISSSKIFI*CQHVQE
Trigger: TTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGA...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR CCA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTTTGCTATCATTTAGATaGCATTCAGGTACAACAGAT +
Preference number: 4 (lower is better)
Translates to: SNIQKSLSAANMYRNISSLLSFR*HSGTTD
Trigger: ATCTGTTGTACCTGAATGCCATCTAAATGATAGCAA...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
CDS-3UTR CCA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTTCTCATGTAGGTCTTTaGGTCAAAATTATATCCACA +
Preference number: 4 (lower is better)
Translates to: SNIQKSLSAANMYRNISSSHVGL*VKIIST
Trigger: TGTGGATATAATTTTGACCCAAAGACCTACATGAGA...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370479.7
ENST00000418814.7
CDS-3UTR CCA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAGGATCAAACTGGTCTaGTTGAACATTTTCAATATC +
Preference number: 4 (lower is better)
Translates to: SNIQKSLSAANMYRNISSRIKLV*LNIFNI
Trigger: GATATTGAAAATGTTCAACCAGACCAGTTTGATCCT...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370479.7
ENST00000418814.7
CDS GCA 90 bp TTCGTCACCGCGGCTCGGCTACTGGCCCAGCGCGGCCAGCGAGCATaGGCAGTCGCCCCAGTCCCGAGGGAGCCCGGGCCAGCCGGCTAT +
Preference number: 5 (lower is better)
Translates to: FVTAARLLAQRGQRA*AVAPVPREPGPAGY
Trigger: ATAGCCGGCTGGCCCGGGCTCCCTCGGGACTGGGGCGACTGCGCATGCTCGCTGGCCGCGCTGGGCCAGTAGCCGAGCCGCGGTGACGAA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505769.5
ENST00000515323.5
CDS GCA 90 bp CGGCCTCTTCCCCCGCCTGTCGAACGGAGGAGCTCGTTGTCCAGCTaGAAGAAGACGGCCCGACCCGGGTCAGCACCATCCCGCCCCGGG +
Preference number: 5 (lower is better)
Translates to: RPLPPPVERRSSLSS*KKTARPGSAPSRPG
Trigger: CCCGGGGCGGGATGGTGCTGACCCGGGTCGGGCCGTCTTCTTGCAGCTGGACAACGAGCTCCTCCGTTCGACAGGCGGGGGAAGAGGCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000361499.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
ENST00000507085.5
ENST00000508844.5
ENST00000515280.5
ENST00000515323.5
CDS GCA 90 bp AGCCCGGTCCCTGCGCTAGTCGATTTGTGCAGTAGGAAAGGAGGCTaGAGGGGATCTGCGCCGGGGCAGGACAGATGCCTTTCGGGACCC +
Preference number: 5 (lower is better)
Translates to: SPVPALVDLCSRKGG*RGSAPGQDRCLSGP
Trigger: GGGTCCCGAAAGGCATCTGTCCTGCCCCGGCGCAGATCCCCTGCAGCCTCCTTTCCTACTGCACAAATCGACTAGCGCAGGGACCGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514185.5
CDS GCA 90 bp GTCCTGCCAACATCCATGGCACCGTGGCAGACTAACTTGTCAGCTTaGAAGTGGGGTAAAATCTCAGACCCTTCCCAATTCTTGAAGCAG +
Preference number: 5 (lower is better)
Translates to: VLPTSMAPWQTNLSA*KWGKISDPSQFLKQ
Trigger: CTGCTTCAAGAATTGGGAAGGGTCTGAGATTTTACCCCACTTGCAAGCTGACAAGTTAGTCTGCCACGGTGCCATGGATGTTGGCAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000508844.5
ENST00000514185.5
ENST00000515280.5
CDS-3UTR CAA 90 bp GTTTCGTTCTTGTCTCTCAGGCTGCAGTGCAACAGCATGATCTTGGCTCACTGCACTATTGCAAGGACCTaGCCCTTGCACAGTTTCAAA +
Preference number: 5 (lower is better)
Translates to: VSFLSLRLQCNSMILAHCTIART*PLHSFK
Trigger: TTTGAAACTGTGCAAGGGCAAGGTCCTTGCAATAGT...GCAGTGAGCCAAGATCATGCTGTTGCACTGCAGCCTGAGAGACAAGAACGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR CAA 90 bp TTCGTTCTTGTCTCTCAGGCTGCAGTGCAACAGCATGATCTTGGCTCACTGCAACAAAGATGGGGTTGTTaGATGATCATGGCAATCGTC +
Preference number: 5 (lower is better)
Translates to: FVLVSQAAVQQHDLGSLQQRWGC*MIMAIV
Trigger: GACGATTGCCATGATCATCAAACAACCCCATCTTTG...TTGCAGTGAGCCAAGATCATGCTGTTGCACTGCAGCCTGAGAGACAAGAACGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR CAA 90 bp TTCCTTCTGAGGGCTAAGTGCATTGCTGTAGCTAACAGCACATGTGTCAGAAATTATAGGAGCTGCATGTaGGCCTTGGCCAGTTCTAGT +
Preference number: 5 (lower is better)
Translates to: FLLRAKCIAVANSTCVRNYRSCM*ALASSS
Trigger: ACTAGAACTGGCCAAGGCCAACATGCAGCTCCTATA...ATTTCTGACACATGTGCTGTTAGCTACAGCAATGCACTTAGCCCTCAGAAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS-3UTR CAA 90 bp TTCGTTCTTGTCTCTCAGGCTGCAGTGCAACAGCATGATCTTGGCTCACTGCAACAGAAGGAAGTATTTTaGATAGCGGTGCACATCTGT +
Preference number: 5 (lower is better)
Translates to: FVLVSQAAVQQHDLGSLQQKEVF*IAVHIC
Trigger: ACAGATGTGCACCGCTATCAAAAATACTTCCTTCTG...TTGCAGTGAGCCAAGATCATGCTGTTGCACTGCAGCCTGAGAGACAAGAACGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR CAA 90 bp TGCCACCTTTGCGTAAAAGCGAGGTACAGCAGAACATATGACAAGGATGACTACCACAAGTATTTCCTCTaGTCGAAGCTCTGTCCAAGG +
Preference number: 5 (lower is better)
Translates to: CHLCVKARYSRTYDKDDYHKYFL*SKLCPR
Trigger: CCTTGGACAGAGCTTCGACAAGAGGAAATACTTGTG...GTAGTCATCCTTGTCATATGTTCTGCTGTACCTCGCTTTTACGCAAAGGTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR CAA 90 bp TTCGTTCTTGTCTCTCAGGCTGCAGTGCAACAGCATGATCTTGGCTCACTGCAAGTATCCAAGTTAGGTTaGGAGCTGCAACTACTTTTC +
Preference number: 5 (lower is better)
Translates to: FVLVSQAAVQQHDLGSLQVSKLG*ELQLLF
Trigger: GAAAAGTAGTTGCAGCTCCAAACCTAACTTGGATAC...TTGCAGTGAGCCAAGATCATGCTGTTGCACTGCAGCCTGAGAGACAAGAACGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR CAA 90 bp TTCGTTCTTGTCTCTCAGGCTGCAGTGCAACAGCATGATCTTGGCTCACTGCAACTGAAAAAGGATCACTaGTACCCAGATGAGTTTCAC +
Preference number: 5 (lower is better)
Translates to: FVLVSQAAVQQHDLGSLQLKKDH*YPDEFH
Trigger: GTGAAACTCATCTGGGTACAAGTGATCCTTTTTCAG...TTGCAGTGAGCCAAGATCATGCTGTTGCACTGCAGCCTGAGAGACAAGAACGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR CAA 90 bp TCAGTAAAGAGGGGCAAATCCTTGCTGCCACCTTTGCGTAAAAGCGAGGTACAGATTTTGAACCATTTGTaGATCCTGCTCTTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: SVKRGKSLLPPLRKSEVQILNHL*ILLFLL
Trigger: GAGGAGGAAGAGCAGGATCAACAAATGGTTCAAAAT...CTGTACCTCGCTTTTACGCAAAGGTGGCAGCAAGGATTTGCCCCTCTTTACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR CAA 90 bp ACTTACAAAAACCTCTGTCTGTCACAATTAGTGAGTGCAAACAGAACTTCTACCGAACGGAGGAGCTCGTaGTCCAGCTGCAAGAAGACG +
Preference number: 5 (lower is better)
Translates to: TYKNLCLSQLVSANRTSTERRSS*SSCKKT
Trigger: CGTCTTCTTGCAGCTGGACAACGAGCTCCTCCGTTC...GGTAGAAGTTCTGTTTGCACTCACTAATTGTGACAGACAGAGGTTTTTGTAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418814.7
CDS-3UTR CAA 90 bp GTTTCGTTCTTGTCTCTCAGGCTGCAGTGCAACAGCATGATCTTGGCTCACTGCGAAAGTATTACTTCATaGGTAAAGGCAGTTCACGTG +
Preference number: 5 (lower is better)
Translates to: VSFLSLRLQCNSMILAHCESITS*VKAVHV
Trigger: CACGTGAACTGCCTTTACCAATGAAGTAATACTTTC...GCAGTGAGCCAAGATCATGCTGTTGCACTGCAGCCTGAGAGACAAGAACGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS GCA 90 bp GGAGGCACCAGCAGGTCTGACTTTCAACTCTGGGCTAGAAAGTCCTaGTACAGAGCTTTCTTCAGTCTCATATTTATCCATTTTACTGGA +
Preference number: 5 (lower is better)
Translates to: GGTSRSDFQLWARKS*YRAFFSLIFIHFTG
Trigger: TCCAGTAAAATGGATAAATATGAGACTGAAGAAAGCTCTGTAGCAGGACTTTCTAGCCCAGAGTTGAAAGTCAGACCTGCTGGTGCCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370479.7
ENST00000393299.6
ENST00000418814.7
ENST00000505868.1
ENST00000515323.5
CDS-3UTR CAA 90 bp TCAGTAAAGAGGGGCAAATCCTTGCTGCCACCTTTGCGTAAAAGCGAGGTACAGCTTCTGGATGCCAGATaGTGTTCCATTTGTGTAATT +
Preference number: 5 (lower is better)
Translates to: SVKRGKSLLPPLRKSEVQLLDAR*CSICVI
Trigger: AATTACACAAATGGAACACAATCTGGCATCCAGAAG...CTGTACCTCGCTTTTACGCAAAGGTGGCAGCAAGGATTTGCCCCTCTTTACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR CAA 90 bp TTCGTTCTTGTCTCTCAGGCTGCAGTGCAACAGCATGATCTTGGCTCACTGCAAAGACTAAATCAGTGTTaGGATGTGTCGCAAAAGAAC +
Preference number: 5 (lower is better)
Translates to: FVLVSQAAVQQHDLGSLQRLNQC*DVSQKN
Trigger: GTTCTTTTGCGACACATCCAAACACTGATTTAGTCT...TTGCAGTGAGCCAAGATCATGCTGTTGCACTGCAGCCTGAGAGACAAGAACGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR CAA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGGAACGGAGGAGCTCGTaGTCCAGCTGCAAGAAGACG +
Preference number: 5 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMERRSS*SSCKKT
Trigger: CGTCTTCTTGCAGCTGGACAACGAGCTCCTCCGTTC...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361499.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR CAA 90 bp AAAGCGAGGTACAGCAGAACATATGACAAGGATGACTACAATTGTCAATCCCATTCCTTGCTGCCACCTTaGCGTAAAAGCGAGGTACAG +
Preference number: 5 (lower is better)
Translates to: KARYSRTYDKDDYNCQSHSLLPP*RKSEVQ
Trigger: CTGTACCTCGCTTTTACGCAAAGGTGGCAGCAAGGA...ATGGGATTGACAATTGTAGTCATCCTTGTCATATGTTCTGCTGTACCTCGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR CAA 90 bp GGGCTAAGCCACTTAGTATCTCTGGGCTTTAGTTATAAAATGAGTAAACAGGACGACAGAGTTTCGTTCTaGTCTCTCAGGCTGCAGTGC +
Preference number: 5 (lower is better)
Translates to: GLSHLVSLGFSYKMSKQDDRVSF*SLRLQC
Trigger: GCACTGCAGCCTGAGAGACAAGAACGAAACTCTGTC...GTCCTGTTTACTCATTTTATAACTAAAGCCCAGAGATACTAAGTGGCTTAGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR CAA 90 bp CCCCAGGCAATCCAAGTTCAATGTAAGTTTTTACTAATCGGAGATCTGCACTGTCACAAGTATTTCCTCTaGTCGAAGCTCTGTCCAAGG +
Preference number: 5 (lower is better)
Translates to: PQAIQVQCKFLLIGDLHCHKYFL*SKLCPR
Trigger: CCTTGGACAGAGCTTCGACAAGAGGAAATACTTGTG...ACAGTGCAGATCTCCGATTAGTAAAAACTTACATTGAACTTGGATTGCCTGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS-3UTR CAA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTGAACGGAGGAGCTCGTaGTCCAGCTGCAAGAAGACG +
Preference number: 5 (lower is better)
Translates to: SNIQKSLSAANMYRNISSERRSS*SSCKKT
Trigger: CGTCTTCTTGCAGCTGGACAACGAGCTCCTCCGTTC...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361499.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR CAA 90 bp GGGCTAAGCCACTTAGTATCTCTGGGCTTTAGTTATAAAATGAGTAAACAGGACTGCAACAGCATGATCTaGGCTCACTGCAACCTTTCC +
Preference number: 5 (lower is better)
Translates to: GLSHLVSLGFSYKMSKQDCNSMI*AHCNLS
Trigger: GGAAAGGTTGCAGTGAGCCAAGATCATGCTGTTGCA...GTCCTGTTTACTCATTTTATAACTAAAGCCCAGAGATACTAAGTGGCTTAGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS TCA 90 bp TCATTTTTAATTTATACCCAGAAGACTATTCTGATAACAGCACCTTaGTCCATGACTCTCATGTCCTGCCAACATCCATGGCACCGTGGC +
Preference number: 5 (lower is better)
Translates to: SFLIYTQKTILITAP*SMTLMSCQHPWHRG
Trigger: GCCACGGTGCCATGGATGTTGGCAGGACATGAGAGTCATGGATCAAGGTGCTGTTATCAGAATAGTCTTCTGGGTATAAATTAAAAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515280.5
CDS-3UTR CAA 90 bp AAGTGCATTGCTGTAGCTAACAGCACATGTGTCAGAAATATCCGTACTGCTTTGCAAAGATGGGGTTGTTaGATGATCATGGCAATCGTC +
Preference number: 5 (lower is better)
Translates to: KCIAVANSTCVRNIRTALQRWGC*MIMAIV
Trigger: GACGATTGCCATGATCATCAAACAACCCCATCTTTG...CAAAGCAGTACGGATATTTCTGACACATGTGCTGTTAGCTACAGCAATGCACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS-3UTR CAA 90 bp TCTGGATGCCAGATTGTGTTCCATTTGTGTAATTTCACTATCGTCCTGGGAGATCCCATTTTGAACCATTaGTTGATCCTGCTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: SGCQIVFHLCNFTIVLGDPILNH*LILLFL
Trigger: GAGGAAGAGCAGGATCAACAAATGGTTCAAAATGGG...ATCTCCCAGGACGATAGTGAAATTACACAAATGGAACACAATCTGGCATCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS-3UTR CAA 90 bp ACAGCTATATGTGCAGCTCTCCCAATGAGTGAATCAGCTGTATTGGGCAATGCATACTATTGGAAATATTaGAGGGCAGCAACCAGAAAG +
Preference number: 5 (lower is better)
Translates to: TAICAALPMSESAVLGNAYYWKY*RAATRK
Trigger: CTTTCTGGTTGCTGCCCTCAAATATTTCCAATAGTA...TGCATTGCCCAATACAGCTGATTCACTCATTGGGAGAGCTGCACATATAGCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS CCA 90 bp GTCCTGCTACAGAGCTTTCTTCAGTCTCATATTTATCCATTTTACTaGACTCTGATCTCTGAAGATTCTGAATTCCCATCCAGGGTGCAT +
Preference number: 5 (lower is better)
Translates to: VLLQSFLQSHIYPFY*TLISEDSEFPSRVH
Trigger: ATGCACCCTGGATGGGAATTCAGAATCTTCAGAGATCAGAGTCCAGTAAAATGGATAAATATGAGACTGAAGAAAGCTCTGTAGCAGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370479.7
ENST00000393299.6
ENST00000418814.7
ENST00000505868.1
ENST00000515323.5
CDS-3UTR CAA 90 bp CCCCAGGCAATCCAAGTTCAATGTAAGTTTTTACTAATCGGAGATCTGCACTGTCAGAAGGAAGTATTTTaGATAGCGGTGCACATCTGT +
Preference number: 5 (lower is better)
Translates to: PQAIQVQCKFLLIGDLHCQKEVF*IAVHIC
Trigger: ACAGATGTGCACCGCTATCAAAAATACTTCCTTCTG...ACAGTGCAGATCTCCGATTAGTAAAAACTTACATTGAACTTGGATTGCCTGGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS-3UTR CAA 90 bp ACTTACAAAAACCTCTGTCTGTCACAATTAGTGAGTGCAAACAGAACTTCTACCCACAAGTATTTCCTCTaGTCGAAGCTCTGTCCAAGG +
Preference number: 5 (lower is better)
Translates to: TYKNLCLSQLVSANRTSTHKYFL*SKLCPR
Trigger: CCTTGGACAGAGCTTCGACAAGAGGAAATACTTGTG...GGTAGAAGTTCTGTTTGCACTCACTAATTGTGACAGACAGAGGTTTTTGTAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000194672.11
ENST00000370479.7
ENST00000418814.7
CDS-3UTR CAA 90 bp ATTGCTGTAGCTAACAGCACATGTGTCAGAAATATCCGTACTGCTTTGAGAACCAATAATCTTTCACTATaGCAAGGACCTTGCCCTTGC +
Preference number: 5 (lower is better)
Translates to: IAVANSTCVRNIRTALRTNNLSL*QGPCPC
Trigger: GCAAGGGCAAGGTCCTTGCAATAGTGAAAGATTATT...GGTTCTCAAAGCAGTACGGATATTTCTGACACATGTGCTGTTAGCTACAGCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS-3UTR CAA 90 bp TCTGGATGCCAGATTGTGTTCCATTTGTGTAATTTCACTATCGTCCTGGGAGATGTATCCAAGTTAGGTTaGGAGCTGCAACTACTTTTC +
Preference number: 5 (lower is better)
Translates to: SGCQIVFHLCNFTIVLGDVSKLG*ELQLLF
Trigger: GAAAAGTAGTTGCAGCTCCAAACCTAACTTGGATAC...ATCTCCCAGGACGATAGTGAAATTACACAAATGGAACACAATCTGGCATCCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS-3UTR CAA 90 bp ATTGCTGTAGCTAACAGCACATGTGTCAGAAATATCCGTACTGCTTTGAGAACCCTGAAAAAGGATCACTaGTACCCAGATGAGTTTCAC +
Preference number: 5 (lower is better)
Translates to: IAVANSTCVRNIRTALRTLKKDH*YPDEFH
Trigger: GTGAAACTCATCTGGGTACAAGTGATCCTTTTTCAG...GGTTCTCAAAGCAGTACGGATATTTCTGACACATGTGCTGTTAGCTACAGCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS-3UTR CAA 90 bp AAGTGCATTGCTGTAGCTAACAGCACATGTGTCAGAAATATCCGTACTGCTTTGATTTTGAACCATTTGTaGATCCTGCTCTTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: KCIAVANSTCVRNIRTALILNHL*ILLFLL
Trigger: GAGGAGGAAGAGCAGGATCAACAAATGGTTCAAAAT...CAAAGCAGTACGGATATTTCTGACACATGTGCTGTTAGCTACAGCAATGCACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS-3UTR CAA 90 bp TATCAGTACTGGCTGAAAAAGGATCACTTGTACCCAGATGAGTTTCACTTTCAAACCAAATTACAGTCCTaGCTTTGCAGAACGGGTCGA +
Preference number: 5 (lower is better)
Translates to: YQYWLKKDHLYPDEFHFQTKLQS*LCRTGR
Trigger: TCGACCCGTTCTGCAAAGCAAGGACTGTAATTTGGT...TTGAAAGTGAAACTCATCTGGGTACAAGTGATCCTTTTTCAGCCAGTACTGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS-3UTR CAA 90 bp TTGTCAATCCCATTAATTCAGAGGAAATCAAAGTATGAACTACTTCTGAGGCAGAAGAGGGGCAAATCCTaGCTGCCACCTTTGCGTAAA +
Preference number: 5 (lower is better)
Translates to: LSIPLIQRKSKYELLLRQKRGKS*LPPLRK
Trigger: TTTACGCAAAGGTGGCAGCAAGGATTTGCCCCTCTT...CTGCCTCAGAAGTAGTTCATACTTTGATTTCCTCTGAATTAATGGGATTGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS CCA 90 bp TCCATCAGTTTGGCAAAGTTTAAAAAGCTTGCCAGTATCAAGAGTTaGAGAGTGTGTGGAGTAACAAACTGTGCTGGTGGGAGTAAAAAT +
Preference number: 5 (lower is better)
Translates to: SISLAKFKKLASIKS*RVCGVTNCAGGSKN
Trigger: ATTTTTACTCCCACCAGCACAGTTTGTTACTCCACACACTCTCCAACTCTTGATACTGGCAAGCTTTTTAAACTTTGCCAAACTGATGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000425415.2
CDS-3UTR CAA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTTATAGGAGCTGCATGTaGGCCTTGGCCAGTTCTAGT +
Preference number: 5 (lower is better)
Translates to: SNIQKSLSAANMYRNISSYRSCM*ALASSS
Trigger: ACTAGAACTGGCCAAGGCCAACATGCAGCTCCTATA...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000194672.11
ENST00000457062.6
CDS-3UTR CAA 90 bp AAGTGCATTGCTGTAGCTAACAGCACATGTGTCAGAAATATCCGTACTGCTTTGCTTCTGGATGCCAGATaGTGTTCCATTTGTGTAATT +
Preference number: 5 (lower is better)
Translates to: KCIAVANSTCVRNIRTALLLDAR*CSICVI
Trigger: AATTACACAAATGGAACACAATCTGGCATCCAGAAG...CAAAGCAGTACGGATATTTCTGACACATGTGCTGTTAGCTACAGCAATGCACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS-3UTR CAA 90 bp ACTTACAAAAACCTCTGTCTGTCACAATTAGTGAGTGCAAACAGAACTTCTACCCAAAGATGGGGTTGTTaGATGATCATGGCAATCGTC +
Preference number: 5 (lower is better)
Translates to: TYKNLCLSQLVSANRTSTQRWGC*MIMAIV
Trigger: GACGATTGCCATGATCATCAAACAACCCCATCTTTG...GGTAGAAGTTCTGTTTGCACTCACTAATTGTGACAGACAGAGGTTTTTGTAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000194672.11
ENST00000370479.7
ENST00000418814.7
CDS-3UTR CAA 90 bp GCAAAGTTGCGCAAGATTCATATTTATAAGTTCTGCCAGTTCATCAGGATTCTCCTCCCAAAGATGGGGTaGTTTGATGATCATGGCAAT +
Preference number: 5 (lower is better)
Translates to: AKLRKIHIYKFCQFIRILLPKMG*FDDHGN
Trigger: ATTGCCATGATCATCAAACAACCCCATCTTTGGGAG...GAGAATCCTGATGAACTGGCAGAACTTATAAATATGAATCTTGCGCAACTTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS-3UTR CAA 90 bp AAAGCGAGGTACAGCAGAACATATGACAAGGATGACTACAATTGTCAATCCCATGTCCAAGGTCCTAGTTaGACAGTTATATTCTCTCCA +
Preference number: 5 (lower is better)
Translates to: KARYSRTYDKDDYNCQSHVQGPS*TVIFSP
Trigger: TGGAGAGAATATAACTGTCAAACTAGGACCTTGGAC...ATGGGATTGACAATTGTAGTCATCCTTGTCATATGTTCTGCTGTACCTCGCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR CAA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGCACAAGTATTTCCTCTaGTCGAAGCTCTGTCCAAGG +
Preference number: 5 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMHKYFL*SKLCPR
Trigger: CCTTGGACAGAGCTTCGACAAGAGGAAATACTTGTG...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR CAA 90 bp TTCCTTCTGAGGGCTAAGTGCATTGCTGTAGCTAACAGCACATGTGTCAGAAATTCTAAGGACTCAAAGTaGGGTAGTAAATTATCCACA +
Preference number: 5 (lower is better)
Translates to: FLLRAKCIAVANSTCVRNSKDSK*GSKLST
Trigger: TGTGGATAATTTACTACCCAACTTTGAGTCCTTAGA...ATTTCTGACACATGTGCTGTTAGCTACAGCAATGCACTTAGCCCTCAGAAGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS-3UTR CAA 90 bp CCCCAGGCAATCCAAGTTCAATGTAAGTTTTTACTAATCGGAGATCTGCACTGTAGACTAAATCAGTGTTaGGATGTGTCGCAAAAGAAC +
Preference number: 5 (lower is better)
Translates to: PQAIQVQCKFLLIGDLHCRLNQC*DVSQKN
Trigger: GTTCTTTTGCGACACATCCAAACACTGATTTAGTCT...ACAGTGCAGATCTCCGATTAGTAAAAACTTACATTGAACTTGGATTGCCTGGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS-3UTR CAA 90 bp GCAAAGTTGCGCAAGATTCATATTTATAAGTTCTGCCAGTTCATCAGGATTCTCACTATTGCAAGGACCTaGCCCTTGCACAGTTTCAAA +
Preference number: 5 (lower is better)
Translates to: AKLRKIHIYKFCQFIRILTIART*PLHSFK
Trigger: TTTGAAACTGTGCAAGGGCAAGGTCCTTGCAATAGT...GAGAATCCTGATGAACTGGCAGAACTTATAAATATGAATCTTGCGCAACTTTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS-3UTR CAA 90 bp CAGCACATGTGTCAGAAATATCCGTACTGCTTTGAGAACCAAAATAATTTTCCAATTACAGTCCTTGCTTaGCAGAACGGGTCGAAGCAA +
Preference number: 5 (lower is better)
Translates to: QHMCQKYPYCFENQNNFPITVLA*QNGSKQ
Trigger: TTGCTTCGACCCGTTCTGCAAAGCAAGGACTGTAAT...TGGAAAATTATTTTGGTTCTCAAAGCAGTACGGATATTTCTGACACATGTGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS-3UTR CAA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGATTACAGTCCTTGCTTaGCAGAACGGGTCGAAGCAA +
Preference number: 5 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMITVLA*QNGSKQ
Trigger: TTGCTTCGACCCGTTCTGCAAAGCAAGGACTGTAAT...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR CAA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGACCAAATTACAGTCCTaGCTTTGCAGAACGGGTCGA +
Preference number: 5 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMTKLQS*LCRTGR
Trigger: TCGACCCGTTCTGCAAAGCAAGGACTGTAATTTGGT...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR CAA 90 bp ACTTACAAAAACCTCTGTCTGTCACAATTAGTGAGTGCAAACAGAACTTCTACCGGAATCACGGAATCTTaGTTTTGTGCTGGTGCATTT +
Preference number: 5 (lower is better)
Translates to: TYKNLCLSQLVSANRTSTGITES*FCAGAF
Trigger: AAATGCACCAGCACAAAACAAAGATTCCGTGATTCC...GGTAGAAGTTCTGTTTGCACTCACTAATTGTGACAGACAGAGGTTTTTGTAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000194672.11
ENST00000370479.7
ENST00000418814.7
CDS-3UTR CAA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGCAAAGATGGGGTTGTTaGATGATCATGGCAATCGTC +
Preference number: 5 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMQRWGC*MIMAIV
Trigger: GACGATTGCCATGATCATCAAACAACCCCATCTTTG...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR CAA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGCTCCCAAAGATGGGGTaGTTTGATGATCATGGCAAT +
Preference number: 5 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMLPKMG*FDDHGN
Trigger: ATTGCCATGATCATCAAACAACCCCATCTTTGGGAG...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR CAA 90 bp TTGTCAATCCCATTAATTCAGAGGAAATCAAAGTATGAACTACTTCTGAGGCAGCTCCCAAAGATGGGGTaGTTTGATGATCATGGCAAT +
Preference number: 5 (lower is better)
Translates to: LSIPLIQRKSKYELLLRQLPKMG*FDDHGN
Trigger: ATTGCCATGATCATCAAACAACCCCATCTTTGGGAG...CTGCCTCAGAAGTAGTTCATACTTTGATTTCCTCTGAATTAATGGGATTGACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR CAA 90 bp ACTTACAAAAACCTCTGTCTGTCACAATTAGTGAGTGCAAACAGAACTTCTACCGTCCAAGGTCCTAGTTaGACAGTTATATTCTCTCCA +
Preference number: 5 (lower is better)
Translates to: TYKNLCLSQLVSANRTSTVQGPS*TVIFSP
Trigger: TGGAGAGAATATAACTGTCAAACTAGGACCTTGGAC...GGTAGAAGTTCTGTTTGCACTCACTAATTGTGACAGACAGAGGTTTTTGTAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000194672.11
ENST00000370479.7
ENST00000418814.7
CDS-3UTR CAA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTCACAAGTATTTCCTCTaGTCGAAGCTCTGTCCAAGG +
Preference number: 5 (lower is better)
Translates to: SNIQKSLSAANMYRNISSHKYFL*SKLCPR
Trigger: CCTTGGACAGAGCTTCGACAAGAGGAAATACTTGTG...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR CAA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGACTATTGCAAGGACCTaGCCCTTGCACAGTTTCAAA +
Preference number: 5 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMTIART*PLHSFK
Trigger: TTTGAAACTGTGCAAGGGCAAGGTCCTTGCAATAGT...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
CDS-3UTR CAA 90 bp ACTTACAAAAACCTCTGTCTGTCACAATTAGTGAGTGCAAACAGAACTTCTACCAATAATCTTTCACTATaGCAAGGACCTTGCCCTTGC +
Preference number: 5 (lower is better)
Translates to: TYKNLCLSQLVSANRTSTNNLSL*QGPCPC
Trigger: GCAAGGGCAAGGTCCTTGCAATAGTGAAAGATTATT...GGTAGAAGTTCTGTTTGCACTCACTAATTGTGACAGACAGAGGTTTTTGTAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000194672.11
ENST00000370479.7
ENST00000418814.7
CDS-3UTR CAA 90 bp ATTGCTGTAGCTAACAGCACATGTGTCAGAAATATCCGTACTGCTTTGAGAACCATTGCTACAGTTTCATaGTCCAAGTTCCCTGAAAAT +
Preference number: 5 (lower is better)
Translates to: IAVANSTCVRNIRTALRTIATVS*SKFPEN
Trigger: ATTTTCAGGGAACTTGGACAATGAAACTGTAGCAAT...GGTTCTCAAAGCAGTACGGATATTTCTGACACATGTGCTGTTAGCTACAGCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS-3UTR CAA 90 bp ACTTACAAAAACCTCTGTCTGTCACAATTAGTGAGTGCAAACAGAACTTCTACCGTATCCAAGTTAGGTTaGGAGCTGCAACTACTTTTC +
Preference number: 5 (lower is better)
Translates to: TYKNLCLSQLVSANRTSTVSKLG*ELQLLF
Trigger: GAAAAGTAGTTGCAGCTCCAAACCTAACTTGGATAC...GGTAGAAGTTCTGTTTGCACTCACTAATTGTGACAGACAGAGGTTTTTGTAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000194672.11
ENST00000370479.7
ENST00000418814.7
CDS-3UTR CAA 90 bp ACTTACAAAAACCTCTGTCTGTCACAATTAGTGAGTGCAAACAGAACTTCTACCCTGAAAAAGGATCACTaGTACCCAGATGAGTTTCAC +
Preference number: 5 (lower is better)
Translates to: TYKNLCLSQLVSANRTSTLKKDH*YPDEFH
Trigger: GTGAAACTCATCTGGGTACAAGTGATCCTTTTTCAG...GGTAGAAGTTCTGTTTGCACTCACTAATTGTGACAGACAGAGGTTTTTGTAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000194672.11
ENST00000370479.7
ENST00000418814.7
CDS-3UTR CAA 90 bp ACTTACAAAAACCTCTGTCTGTCACAATTAGTGAGTGCAAACAGAACTTCTACCATTTTGAACCATTTGTaGATCCTGCTCTTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: TYKNLCLSQLVSANRTSTILNHL*ILLFLL
Trigger: GAGGAGGAAGAGCAGGATCAACAAATGGTTCAAAAT...GGTAGAAGTTCTGTTTGCACTCACTAATTGTGACAGACAGAGGTTTTTGTAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000194672.11
ENST00000370479.7
ENST00000418814.7
CDS-3UTR CAA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGCCCATTTTGAACCATTaGTTGATCCTGCTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMPILNH*LILLFL
Trigger: GAGGAAGAGCAGGATCAACAAATGGTTCAAAATGGG...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR CAA 90 bp ACAGCAGAACATATGACAAGGATGACTACAATTGTCAATCCCATTAATTCAGAGCCCATTTTGAACCATTaGTTGATCCTGCTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: TAEHMTRMTTIVNPINSEPILNH*LILLFL
Trigger: GAGGAAGAGCAGGATCAACAAATGGTTCAAAATGGG...CTCTGAATTAATGGGATTGACAATTGTAGTCATCCTTGTCATATGTTCTGCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR CAA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTATTACAGTCCTTGCTTaGCAGAACGGGTCGAAGCAA +
Preference number: 5 (lower is better)
Translates to: SNIQKSLSAANMYRNISSITVLA*QNGSKQ
Trigger: TTGCTTCGACCCGTTCTGCAAAGCAAGGACTGTAAT...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR CAA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTACCAAATTACAGTCCTaGCTTTGCAGAACGGGTCGA +
Preference number: 5 (lower is better)
Translates to: SNIQKSLSAANMYRNISSTKLQS*LCRTGR
Trigger: TCGACCCGTTCTGCAAAGCAAGGACTGTAATTTGGT...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR CAA 90 bp AAAGCGAGGTACAGCAGAACATATGACAAGGATGACTACAATTGTCAATCCCATAATTATATCCACATATaGTGGGATCCAGACCTTCCT +
Preference number: 5 (lower is better)
Translates to: KARYSRTYDKDDYNCQSHNYIHI*WDPDLP
Trigger: AGGAAGGTCTGGATCCCACAATATGTGGATATAATT...ATGGGATTGACAATTGTAGTCATCCTTGTCATATGTTCTGCTGTACCTCGCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR CAA 90 bp GGGCTAAGCCACTTAGTATCTCTGGGCTTTAGTTATAAAATGAGTAAACAGGACGTCTCATGTAGGTCTTaGGGTCAAAATTATATCCAC +
Preference number: 5 (lower is better)
Translates to: GLSHLVSLGFSYKMSKQDVSCRS*GQNYIH
Trigger: GTGGATATAATTTTGACCCAAAGACCTACATGAGAC...GTCCTGTTTACTCATTTTATAACTAAAGCCCAGAGATACTAAGTGGCTTAGCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS CCA 90 bp CTGGATGCCAGATTGTGTTCCATTTGTGTAATTTCACTATCGTCCTaGGAGATATCAAGTTTACCTGAAATGGACAAATTTGCACAAAGA +
Preference number: 5 (lower is better)
Translates to: LDARLCSICVISLSS*EISSLPEMDKFAQR
Trigger: TCTTTGTGCAAATTTGTCCATTTCAGGTAAACTTGATATCTCCCAGGACGATAGTGAAATTACACAAATGGAACACAATCTGGCATCCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370479.7
ENST00000418814.7
ENST00000505868.1
CDS-3UTR CAA 90 bp TCAGAAAATCTGCGTACCCTCAAAGTATGGTGCTCTTGTGCTAATAATATTCTTTTCTATTTAACCAAGTaGTCTTCACAGGGCGAGGAA +
Preference number: 5 (lower is better)
Translates to: SENLRTLKVWCSCANNILFYLTK*SSQGEE
Trigger: TTCCTCGCCCTGTGAAGACAACTTGGTTAAATAGAA...AAGAATATTATTAGCACAAGAGCACCATACTTTGAGGGTACGCAGATTTTCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS-3UTR CAA 90 bp CTCAAAGTATGGTGCTCTTGTGCTAATAATATTCTTAGTTCTTCGTGTAGCGTTGGAATCACGGAATCTTaGTTTTGTGCTGGTGCATTT +
Preference number: 5 (lower is better)
Translates to: LKVWCSCANNILSSSCSVGITES*FCAGAF
Trigger: AAATGCACCAGCACAAAACAAAGATTCCGTGATTCC...AACGCTACACGAAGAACTAAGAATATTATTAGCACAAGAGCACCATACTTTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS-3UTR CAA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGGGAATCACGGAATCTTaGTTTTGTGCTGGTGCATTT +
Preference number: 5 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMGITES*FCAGAF
Trigger: AAATGCACCAGCACAAAACAAAGATTCCGTGATTCC...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR CAA 90 bp ACAGCAGAACATATGACAAGGATGACTACAATTGTCAATCCCATTAATTCAGAGGGAATCACGGAATCTTaGTTTTGTGCTGGTGCATTT +
Preference number: 5 (lower is better)
Translates to: TAEHMTRMTTIVNPINSEGITES*FCAGAF
Trigger: AAATGCACCAGCACAAAACAAAGATTCCGTGATTCC...CTCTGAATTAATGGGATTGACAATTGTAGTCATCCTTGTCATATGTTCTGCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR CAA 90 bp ACTTACAAAAACCTCTGTCTGTCACAATTAGTGAGTGCAAACAGAACTTCTACCCTTCTGGATGCCAGATaGTGTTCCATTTGTGTAATT +
Preference number: 5 (lower is better)
Translates to: TYKNLCLSQLVSANRTSTLLDAR*CSICVI
Trigger: AATTACACAAATGGAACACAATCTGGCATCCAGAAG...GGTAGAAGTTCTGTTTGCACTCACTAATTGTGACAGACAGAGGTTTTTGTAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000194672.11
ENST00000370479.7
ENST00000418814.7
CDS-3UTR CAA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTCAAAGATGGGGTTGTTaGATGATCATGGCAATCGTC +
Preference number: 5 (lower is better)
Translates to: SNIQKSLSAANMYRNISSQRWGC*MIMAIV
Trigger: GACGATTGCCATGATCATCAAACAACCCCATCTTTG...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR CAA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTCTCCCAAAGATGGGGTaGTTTGATGATCATGGCAAT +
Preference number: 5 (lower is better)
Translates to: SNIQKSLSAANMYRNISSLPKMG*FDDHGN
Trigger: ATTGCCATGATCATCAAACAACCCCATCTTTGGGAG...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR CAA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGGTCCAAGGTCCTAGTTaGACAGTTATATTCTCTCCA +
Preference number: 5 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMVQGPS*TVIFSP
Trigger: TGGAGAGAATATAACTGTCAAACTAGGACCTTGGAC...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR CAA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTACTATTGCAAGGACCTaGCCCTTGCACAGTTTCAAA +
Preference number: 5 (lower is better)
Translates to: SNIQKSLSAANMYRNISSTIART*PLHSFK
Trigger: TTTGAAACTGTGCAAGGGCAAGGTCCTTGCAATAGT...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
CDS-3UTR CAA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGAATAATCTTTCACTATaGCAAGGACCTTGCCCTTGC +
Preference number: 5 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMNNLSL*QGPCPC
Trigger: GCAAGGGCAAGGTCCTTGCAATAGTGAAAGATTATT...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
CDS-3UTR CAA 90 bp ACAGCAGAACATATGACAAGGATGACTACAATTGTCAATCCCATTAATTCAGAGAATAATCTTTCACTATaGCAAGGACCTTGCCCTTGC +
Preference number: 5 (lower is better)
Translates to: TAEHMTRMTTIVNPINSENNLSL*QGPCPC
Trigger: GCAAGGGCAAGGTCCTTGCAATAGTGAAAGATTATT...CTCTGAATTAATGGGATTGACAATTGTAGTCATCCTTGTCATATGTTCTGCTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR CAA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGGTATCCAAGTTAGGTTaGGAGCTGCAACTACTTTTC +
Preference number: 5 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMVSKLG*ELQLLF
Trigger: GAAAAGTAGTTGCAGCTCCAAACCTAACTTGGATAC...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR CAA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGCTGAAAAAGGATCACTaGTACCCAGATGAGTTTCAC +
Preference number: 5 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMLKKDH*YPDEFH
Trigger: GTGAAACTCATCTGGGTACAAGTGATCCTTTTTCAG...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR CAA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGATTTTGAACCATTTGTaGATCCTGCTCTTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMILNHL*ILLFLL
Trigger: GAGGAGGAAGAGCAGGATCAACAAATGGTTCAAAAT...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR CAA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTCCCATTTTGAACCATTaGTTGATCCTGCTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: SNIQKSLSAANMYRNISSPILNH*LILLFL
Trigger: GAGGAAGAGCAGGATCAACAAATGGTTCAAAATGGG...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR CAA 90 bp ACTTACAAAAACCTCTGTCTGTCACAATTAGTGAGTGCAAACAGAACTTCTACCCTTGTATTTGAGGTTTaGGTGAACTTTCATACCAGG +
Preference number: 5 (lower is better)
Translates to: TYKNLCLSQLVSANRTSTLVFEV*VNFHTR
Trigger: CCTGGTATGAAAGTTCACCAAAACCTCAAATACAAG...GGTAGAAGTTCTGTTTGCACTCACTAATTGTGACAGACAGAGGTTTTTGTAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000194672.11
ENST00000370479.7
ENST00000418814.7
CDS-3UTR CAA 90 bp CAGCACATGTGTCAGAAATATCCGTACTGCTTTGAGAACCAAAATAATTTTCCAAGTGAATCAGCTGTATaGGGCAATGCATTGATGACA +
Preference number: 5 (lower is better)
Translates to: QHMCQKYPYCFENQNNFPSESAV*GNALMT
Trigger: TGTCATCAATGCATTGCCCAATACAGCTGATTCACT...TGGAAAATTATTTTGGTTCTCAAAGCAGTACGGATATTTCTGACACATGTGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS-3UTR CAA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGAGTGAATCAGCTGTATaGGGCAATGCATTGATGACA +
Preference number: 5 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMSESAV*GNALMT
Trigger: TGTCATCAATGCATTGCCCAATACAGCTGATTCACT...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR CAA 90 bp ACTTACAAAAACCTCTGTCTGTCACAATTAGTGAGTGCAAACAGAACTTCTACCTACTATTGGAAATATTaGAGGGCAGCAACCAGAAAG +
Preference number: 5 (lower is better)
Translates to: TYKNLCLSQLVSANRTSTYYWKY*RAATRK
Trigger: CTTTCTGGTTGCTGCCCTCAAATATTTCCAATAGTA...GGTAGAAGTTCTGTTTGCACTCACTAATTGTGACAGACAGAGGTTTTTGTAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000194672.11
ENST00000370479.7
ENST00000418814.7
CDS-3UTR CAA 90 bp ACTTACAAAAACCTCTGTCTGTCACAATTAGTGAGTGCAAACAGAACTTCTACCAATTATATCCACATATaGTGGGATCCAGACCTTCCT +
Preference number: 5 (lower is better)
Translates to: TYKNLCLSQLVSANRTSTNYIHI*WDPDLP
Trigger: AGGAAGGTCTGGATCCCACAATATGTGGATATAATT...GGTAGAAGTTCTGTTTGCACTCACTAATTGTGACAGACAGAGGTTTTTGTAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370479.7
ENST00000418814.7
CDS-3UTR CAA 90 bp TTGTCAATCCCATTAATTCAGAGGAAATCAAAGTATGAACTACTTCTGAGGCAGGCACAAAGATTTAGGTaGCCAGAGTTCAAAGGATCA +
Preference number: 5 (lower is better)
Translates to: LSIPLIQRKSKYELLLRQAQRFR*PEFKGS
Trigger: TGATCCTTTGAACTCTGGCAACCTAAATCTTTGTGC...CTGCCTCAGAAGTAGTTCATACTTTGATTTCCTCTGAATTAATGGGATTGACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS TCA 90 bp CAAAGATTTAGGTTGCCAGAGTTCAAAGGATCAAACTGGTCTGGTTaGACATTTTCAATATCTGGAGACTTTTGTTCAGTTCTCTCTGTA +
Preference number: 5 (lower is better)
Translates to: QRFRLPEFKGSNWSG*TFSISGDFCSVLSV
Trigger: TACAGAGAGAACTGAACAAAAGTCTCCAGATATTGAAAATGTTCAACCAGACCAGTTTGATCCTTTGAACTCTGGCAACCTAAATCTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370479.7
ENST00000418814.7
ENST00000505868.1
CDS-3UTR CAA 90 bp GCAAAGTTGCGCAAGATTCATATTTATAAGTTCTGCCAGTTCATCAGGATTCTCCAGAGAATTCTACCATaGCTTGAACTTCAGTCATTT +
Preference number: 5 (lower is better)
Translates to: AKLRKIHIYKFCQFIRILQRILP*LELQSF
Trigger: AAATGACTGAAGTTCAAGCAATGGTAGAATTCTCTG...GAGAATCCTGATGAACTGGCAGAACTTATAAATATGAATCTTGCGCAACTTTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS-3UTR CAA 90 bp ACTTACAAAAACCTCTGTCTGTCACAATTAGTGAGTGCAAACAGAACTTCTACCCAGAGAATTCTACCATaGCTTGAACTTCAGTCATTT +
Preference number: 5 (lower is better)
Translates to: TYKNLCLSQLVSANRTSTQRILP*LELQSF
Trigger: AAATGACTGAAGTTCAAGCAATGGTAGAATTCTCTG...GGTAGAAGTTCTGTTTGCACTCACTAATTGTGACAGACAGAGGTTTTTGTAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000194672.11
ENST00000370479.7
ENST00000418814.7
CDS-3UTR CAA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTGGAATCACGGAATCTTaGTTTTGTGCTGGTGCATTT +
Preference number: 5 (lower is better)
Translates to: SNIQKSLSAANMYRNISSGITES*FCAGAF
Trigger: AAATGCACCAGCACAAAACAAAGATTCCGTGATTCC...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR CAA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGCTTCTGGATGCCAGATaGTGTTCCATTTGTGTAATT +
Preference number: 5 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMLLDAR*CSICVI
Trigger: AATTACACAAATGGAACACAATCTGGCATCCAGAAG...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR CAA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTGTCCAAGGTCCTAGTTaGACAGTTATATTCTCTCCA +
Preference number: 5 (lower is better)
Translates to: SNIQKSLSAANMYRNISSVQGPS*TVIFSP
Trigger: TGGAGAGAATATAACTGTCAAACTAGGACCTTGGAC...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR CAA 90 bp ACTTACAAAAACCTCTGTCTGTCACAATTAGTGAGTGCAAACAGAACTTCTACCTCTAAGGACTCAAAGTaGGGTAGTAAATTATCCACA +
Preference number: 5 (lower is better)
Translates to: TYKNLCLSQLVSANRTSTSKDSK*GSKLST
Trigger: TGTGGATAATTTACTACCCAACTTTGAGTCCTTAGA...GGTAGAAGTTCTGTTTGCACTCACTAATTGTGACAGACAGAGGTTTTTGTAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000194672.11
ENST00000370479.7
ENST00000418814.7
CDS-3UTR CAA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGAGACTAAATCAGTGTTaGGATGTGTCGCAAAAGAAC +
Preference number: 5 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMRLNQC*DVSQKN
Trigger: GTTCTTTTGCGACACATCCAAACACTGATTTAGTCT...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
CDS-3UTR CAA 90 bp ACTTACAAAAACCTCTGTCTGTCACAATTAGTGAGTGCAAACAGAACTTCTACCATTGCTACAGTTTCATaGTCCAAGTTCCCTGAAAAT +
Preference number: 5 (lower is better)
Translates to: TYKNLCLSQLVSANRTSTIATVS*SKFPEN
Trigger: ATTTTCAGGGAACTTGGACAATGAAACTGTAGCAAT...GGTAGAAGTTCTGTTTGCACTCACTAATTGTGACAGACAGAGGTTTTTGTAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000194672.11
ENST00000370479.7
ENST00000418814.7
CDS-3UTR CAA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTGTATCCAAGTTAGGTTaGGAGCTGCAACTACTTTTC +
Preference number: 5 (lower is better)
Translates to: SNIQKSLSAANMYRNISSVSKLG*ELQLLF
Trigger: GAAAAGTAGTTGCAGCTCCAAACCTAACTTGGATAC...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR CAA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTCTGAAAAAGGATCACTaGTACCCAGATGAGTTTCAC +
Preference number: 5 (lower is better)
Translates to: SNIQKSLSAANMYRNISSLKKDH*YPDEFH
Trigger: GTGAAACTCATCTGGGTACAAGTGATCCTTTTTCAG...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR CAA 90 bp ACTTACAAAAACCTCTGTCTGTCACAATTAGTGAGTGCAAACAGAACTTCTACCATTTTCCACAAGCCCTaGCTTTACTATATCAGTACT +
Preference number: 5 (lower is better)
Translates to: TYKNLCLSQLVSANRTSTIFHKP*LYYIST
Trigger: AGTACTGATATAGTAAAGCAAGGGCTTGTGGAAAAT...GGTAGAAGTTCTGTTTGCACTCACTAATTGTGACAGACAGAGGTTTTTGTAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000194672.11
ENST00000370479.7
ENST00000418814.7
CDS-3UTR CAA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTATTTTGAACCATTTGTaGATCCTGCTCTTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: SNIQKSLSAANMYRNISSILNHL*ILLFLL
Trigger: GAGGAGGAAGAGCAGGATCAACAAATGGTTCAAAAT...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR CAA 90 bp TCAGAAAATCTGCGTACCCTCAAAGTATGGTGCTCTTGTGCTAATAATATTCTTCTTGTATTTGAGGTTTaGGTGAACTTTCATACCAGG +
Preference number: 5 (lower is better)
Translates to: SENLRTLKVWCSCANNILLVFEV*VNFHTR
Trigger: CCTGGTATGAAAGTTCACCAAAACCTCAAATACAAG...AAGAATATTATTAGCACAAGAGCACCATACTTTGAGGGTACGCAGATTTTCTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS-3UTR CAA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGCTTGTATTTGAGGTTTaGGTGAACTTTCATACCAGG +
Preference number: 5 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMLVFEV*VNFHTR
Trigger: CCTGGTATGAAAGTTCACCAAAACCTCAAATACAAG...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR CAA 90 bp TTGTCAATCCCATTAATTCAGAGGAAATCAAAGTATGAACTACTTCTGAGGCAGCTTGTATTTGAGGTTTaGGTGAACTTTCATACCAGG +
Preference number: 5 (lower is better)
Translates to: LSIPLIQRKSKYELLLRQLVFEV*VNFHTR
Trigger: CCTGGTATGAAAGTTCACCAAAACCTCAAATACAAG...CTGCCTCAGAAGTAGTTCATACTTTGATTTCCTCTGAATTAATGGGATTGACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR CAA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAGTGAATCAGCTGTATaGGGCAATGCATTGATGACA +
Preference number: 5 (lower is better)
Translates to: SNIQKSLSAANMYRNISSSESAV*GNALMT
Trigger: TGTCATCAATGCATTGCCCAATACAGCTGATTCACT...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR CAA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGTACTATTGGAAATATTaGAGGGCAGCAACCAGAAAG +
Preference number: 5 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMYYWKY*RAATRK
Trigger: CTTTCTGGTTGCTGCCCTCAAATATTTCCAATAGTA...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR CAA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAAATACATAATCCAGTaGATCTTCAACCCTCTCGCC +
Preference number: 5 (lower is better)
Translates to: SNIQKSLSAANMYRNISSKYIIQ*IFNPLA
Trigger: GGCGAGAGGGTTGAAGATCAACTGGATTATGTATTT...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361499.7
ENST00000418814.7
ENST00000505769.5
CDS-3UTR CAA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGTGTTTGTGGACTGCTTaGAGATTCCAGAACCAAATA +
Preference number: 5 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMCLWTA*RFQNQI
Trigger: TATTTGGTTCTGGAATCTCAAAGCAGTCCACAAACA...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361499.7
ENST00000418814.7
ENST00000505769.5
CDS-3UTR CAA 90 bp ACTTACAAAAACCTCTGTCTGTCACAATTAGTGAGTGCAAACAGAACTTCTACCAACATAAGGAAGAATTaGTTTGTGGACTGCTTTGAG +
Preference number: 5 (lower is better)
Translates to: TYKNLCLSQLVSANRTSTNIRKN*FVDCFE
Trigger: CTCAAAGCAGTCCACAAACAAATTCTTCCTTATGTT...GGTAGAAGTTCTGTTTGCACTCACTAATTGTGACAGACAGAGGTTTTTGTAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418814.7
CDS-3UTR CAA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGAATTATATCCACATATaGTGGGATCCAGACCTTCCT +
Preference number: 5 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMNYIHI*WDPDLP
Trigger: AGGAAGGTCTGGATCCCACAATATGTGGATATAATT...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370479.7
ENST00000418814.7
CDS-3UTR CAA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGGTCTCATGTAGGTCTTaGGGTCAAAATTATATCCAC +
Preference number: 5 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMVSCRS*GQNYIH
Trigger: GTGGATATAATTTTGACCCAAAGACCTACATGAGAC...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370479.7
ENST00000418814.7
CDS-3UTR CAA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTGCACAAAGATTTAGGTaGCCAGAGTTCAAAGGATCA +
Preference number: 5 (lower is better)
Translates to: SNIQKSLSAANMYRNISSAQRFR*PEFKGS
Trigger: TGATCCTTTGAACTCTGGCAACCTAAATCTTTGTGC...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370479.7
ENST00000418814.7
CDS-3UTR CAA 90 bp ACTTACAAAAACCTCTGTCTGTCACAATTAGTGAGTGCAAACAGAACTTCTACCCTGAAATGGACAAATTaGCACAAAGATTTAGGTTGC +
Preference number: 5 (lower is better)
Translates to: TYKNLCLSQLVSANRTSTLKWTN*HKDLGC
Trigger: GCAACCTAAATCTTTGTGCAAATTTGTCCATTTCAG...GGTAGAAGTTCTGTTTGCACTCACTAATTGTGACAGACAGAGGTTTTTGTAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370479.7
ENST00000418814.7
CDS-3UTR CAA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGCAGAGAATTCTACCATaGCTTGAACTTCAGTCATTT +
Preference number: 5 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMQRILP*LELQSF
Trigger: AAATGACTGAAGTTCAAGCAATGGTAGAATTCTCTG...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR CAA 90 bp CTCAAAGTATGGTGCTCTTGTGCTAATAATATTCTTAGTTCTTCGTGTAGCGTTCAGATTGTGTTCCATTaGTGTAATTTCACTATCGTC +
Preference number: 5 (lower is better)
Translates to: LKVWCSCANNILSSSCSVQIVFH*CNFTIV
Trigger: GACGATAGTGAAATTACACAAATGGAACACAATCTG...AACGCTACACGAAGAACTAAGAATATTATTAGCACAAGAGCACCATACTTTGAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS-3UTR CAA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGCAGATTGTGTTCCATTaGTGTAATTTCACTATCGTC +
Preference number: 5 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMQIVFH*CNFTIV
Trigger: GACGATAGTGAAATTACACAAATGGAACACAATCTG...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR CAA 90 bp TTGTCAATCCCATTAATTCAGAGGAAATCAAAGTATGAACTACTTCTGAGGCAGCAGATTGTGTTCCATTaGTGTAATTTCACTATCGTC +
Preference number: 5 (lower is better)
Translates to: LSIPLIQRKSKYELLLRQQIVFH*CNFTIV
Trigger: GACGATAGTGAAATTACACAAATGGAACACAATCTG...CTGCCTCAGAAGTAGTTCATACTTTGATTTCCTCTGAATTAATGGGATTGACAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR CAA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTCTTCTGGATGCCAGATaGTGTTCCATTTGTGTAATT +
Preference number: 5 (lower is better)
Translates to: SNIQKSLSAANMYRNISSLLDAR*CSICVI
Trigger: AATTACACAAATGGAACACAATCTGGCATCCAGAAG...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR CAA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGTCTAAGGACTCAAAGTaGGGTAGTAAATTATCCACA +
Preference number: 5 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMSKDSK*GSKLST
Trigger: TGTGGATAATTTACTACCCAACTTTGAGTCCTTAGA...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR CAA 90 bp TTGTCAATCCCATTAATTCAGAGGAAATCAAAGTATGAACTACTTCTGAGGCAGTCTAAGGACTCAAAGTaGGGTAGTAAATTATCCACA +
Preference number: 5 (lower is better)
Translates to: LSIPLIQRKSKYELLLRQSKDSK*GSKLST
Trigger: TGTGGATAATTTACTACCCAACTTTGAGTCCTTAGA...CTGCCTCAGAAGTAGTTCATACTTTGATTTCCTCTGAATTAATGGGATTGACAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR CAA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAGACTAAATCAGTGTTaGGATGTGTCGCAAAAGAAC +
Preference number: 5 (lower is better)
Translates to: SNIQKSLSAANMYRNISSRLNQC*DVSQKN
Trigger: GTTCTTTTGCGACACATCCAAACACTGATTTAGTCT...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
CDS-3UTR CAA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGATTGCTACAGTTTCATaGTCCAAGTTCCCTGAAAAT +
Preference number: 5 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMIATVS*SKFPEN
Trigger: ATTTTCAGGGAACTTGGACAATGAAACTGTAGCAAT...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
CDS-3UTR CAA 90 bp TTGTCAATCCCATTAATTCAGAGGAAATCAAAGTATGAACTACTTCTGAGGCAGATTGCTACAGTTTCATaGTCCAAGTTCCCTGAAAAT +
Preference number: 5 (lower is better)
Translates to: LSIPLIQRKSKYELLLRQIATVS*SKFPEN
Trigger: ATTTTCAGGGAACTTGGACAATGAAACTGTAGCAAT...CTGCCTCAGAAGTAGTTCATACTTTGATTTCCTCTGAATTAATGGGATTGACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR CAA 90 bp TCAGAAAATCTGCGTACCCTCAAAGTATGGTGCTCTTGTGCTAATAATATTCTTATTTTCCACAAGCCCTaGCTTTACTATATCAGTACT +
Preference number: 5 (lower is better)
Translates to: SENLRTLKVWCSCANNILIFHKP*LYYIST
Trigger: AGTACTGATATAGTAAAGCAAGGGCTTGTGGAAAAT...AAGAATATTATTAGCACAAGAGCACCATACTTTGAGGGTACGCAGATTTTCTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000194672.11
CDS-3UTR CAA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGATTTTCCACAAGCCCTaGCTTTACTATATCAGTACT +
Preference number: 5 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMIFHKP*LYYIST
Trigger: AGTACTGATATAGTAAAGCAAGGGCTTGTGGAAAAT...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR CAA 90 bp ACAGCAGAACATATGACAAGGATGACTACAATTGTCAATCCCATTAATTCAGAGATTTTCCACAAGCCCTaGCTTTACTATATCAGTACT +
Preference number: 5 (lower is better)
Translates to: TAEHMTRMTTIVNPINSEIFHKP*LYYIST
Trigger: AGTACTGATATAGTAAAGCAAGGGCTTGTGGAAAAT...CTCTGAATTAATGGGATTGACAATTGTAGTCATCCTTGTCATATGTTCTGCTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR CAA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTCTTGTATTTGAGGTTTaGGTGAACTTTCATACCAGG +
Preference number: 5 (lower is better)
Translates to: SNIQKSLSAANMYRNISSLVFEV*VNFHTR
Trigger: CCTGGTATGAAAGTTCACCAAAACCTCAAATACAAG...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR CAA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTTACTATTGGAAATATTaGAGGGCAGCAACCAGAAAG +
Preference number: 5 (lower is better)
Translates to: SNIQKSLSAANMYRNISSYYWKY*RAATRK
Trigger: CTTTCTGGTTGCTGCCCTCAAATATTTCCAATAGTA...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR CAA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTTGTTTGTGGACTGCTTaGAGATTCCAGAACCAAATA +
Preference number: 5 (lower is better)
Translates to: SNIQKSLSAANMYRNISSCLWTA*RFQNQI
Trigger: TATTTGGTTCTGGAATCTCAAAGCAGTCCACAAACA...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361499.7
ENST00000418814.7
ENST00000505769.5
CDS-3UTR CAA 90 bp CTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTAATAAAAGTCAGTATGAACATAAGGAAGAATTaGTTTGTGGACTGCTTTGAG +
Preference number: 5 (lower is better)
Translates to: LYLLPTCTGTFPVIKVSMNIRKN*FVDCFE
Trigger: CTCAAAGCAGTCCACAAACAAATTCTTCCTTATGTT...CATACTGACTTTTATTACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361499.7
ENST00000418814.7
ENST00000505769.5
CDS-3UTR CAA 90 bp TTGTCAATCCCATTAATTCAGAGGAAATCAAAGTATGAACTACTTCTGAGGCAGCTGAAATGGACAAATTaGCACAAAGATTTAGGTTGC +
Preference number: 5 (lower is better)
Translates to: LSIPLIQRKSKYELLLRQLKWTN*HKDLGC
Trigger: GCAACCTAAATCTTTGTGCAAATTTGTCCATTTCAG...CTGCCTCAGAAGTAGTTCATACTTTGATTTCCTCTGAATTAATGGGATTGACAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR CAA 90 bp ACAGCAGAACATATGACAAGGATGACTACAATTGTCAATCCCATTAATTCAGAGCCATTACCTGACTGTTaGTCCTTTAAAGCTGTTTTA +
Preference number: 5 (lower is better)
Translates to: TAEHMTRMTTIVNPINSEPLPDC*SFKAVL
Trigger: TAAAACAGCTTTAAAGGACAAACAGTCAGGTAATGG...CTCTGAATTAATGGGATTGACAATTGTAGTCATCCTTGTCATATGTTCTGCTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505868.1
CDS-3UTR CAA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTCAGAGAATTCTACCATaGCTTGAACTTCAGTCATTT +
Preference number: 5 (lower is better)
Translates to: SNIQKSLSAANMYRNISSQRILP*LELQSF
Trigger: AAATGACTGAAGTTCAAGCAATGGTAGAATTCTCTG...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR CAA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTCAGATTGTGTTCCATTaGTGTAATTTCACTATCGTC +
Preference number: 5 (lower is better)
Translates to: SNIQKSLSAANMYRNISSQIVFH*CNFTIV
Trigger: GACGATAGTGAAATTACACAAATGGAACACAATCTG...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR CAA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTTCTAAGGACTCAAAGTaGGGTAGTAAATTATCCACA +
Preference number: 5 (lower is better)
Translates to: SNIQKSLSAANMYRNISSSKDSK*GSKLST
Trigger: TGTGGATAATTTACTACCCAACTTTGAGTCCTTAGA...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR CAA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTATTGCTACAGTTTCATaGTCCAAGTTCCCTGAAAAT +
Preference number: 5 (lower is better)
Translates to: SNIQKSLSAANMYRNISSIATVS*SKFPEN
Trigger: ATTTTCAGGGAACTTGGACAATGAAACTGTAGCAAT...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
CDS-3UTR CAA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTATTTTCCACAAGCCCTaGCTTTACTATATCAGTACT +
Preference number: 5 (lower is better)
Translates to: SNIQKSLSAANMYRNISSIFHKP*LYYIST
Trigger: AGTACTGATATAGTAAAGCAAGGGCTTGTGGAAAAT...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
CDS-3UTR CAA 90 bp TCAAACATTCAAAAATCTTTATCTGCTGCCAACATGTACAGGAACATTTCCAGTCTGAAATGGACAAATTaGCACAAAGATTTAGGTTGC +
Preference number: 5 (lower is better)
Translates to: SNIQKSLSAANMYRNISSLKWTN*HKDLGC
Trigger: GCAACCTAAATCTTTGTGCAAATTTGTCCATTTCAG...ACTGGAAATGTTCCTGTACATGTTGGCAGCAGATAAAGATTTTTGAATGTTTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370479.7
ENST00000418814.7
CDS GCA 72 bp GCGGCTCGGCTACTGGCCCAGCGCGGCCAGCGAGCATaGGCAGTCGCCCCAGTCCCGAGGGAGCCCGGGCCA +
Preference number: 6 (lower is better)
Translates to: AARLLAQRGQRA*AVAPVPREPGP
Trigger: TGGCCCGGGCTCCCTCGGGACTGGGGCGACTGCGCATGCTCGCTGGCCGCGCTGGGCCAGTAGCCGAGCCGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505769.5
ENST00000515323.5
CDS CAA 90 bp CGCCCGGCTCGGCCTCTTCCCCCGCCTGTCGAACGGAGGAGCTCGTaGTCCAGCTGCAAGAAGACGGCCCGACCCGGGTCAGCACCATCC +
Preference number: 6 (lower is better)
Translates to: RPARPLPPPVERRSS*SSCKKTARPGSAPS
Trigger: GGATGGTGCTGACCCGGGTCGGGCCGTCTTCTTGCAGCTGGACAACGAGCTCCTCCGTTCGACAGGCGGGGGAAGAGGCCGAGCCGGGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000361499.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
ENST00000507085.5
ENST00000508844.5
ENST00000515280.5
ENST00000515323.5
CDS GCA 72 bp CCCCCGCCTGTCGAACGGAGGAGCTCGTTGTCCAGCTaGAAGAAGACGGCCCGACCCGGGTCAGCACCATCC +
Preference number: 6 (lower is better)
Translates to: PPPVERRSSLSS*KKTARPGSAPS
Trigger: GGATGGTGCTGACCCGGGTCGGGCCGTCTTCTTGCAGCTGGACAACGAGCTCCTCCGTTCGACAGGCGGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000361499.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
ENST00000507085.5
ENST00000508844.5
ENST00000515280.5
ENST00000515323.5
CDS CAA 72 bp CGGCCTCTTCCCCCGCCTGTCGAACGGAGGAGCTCGTaGTCCAGCTGCAAGAAGACGGCCCGACCCGGGTCA +
Preference number: 6 (lower is better)
Translates to: RPLPPPVERRSS*SSCKKTARPGS
Trigger: TGACCCGGGTCGGGCCGTCTTCTTGCAGCTGGACAACGAGCTCCTCCGTTCGACAGGCGGGGGAAGAGGCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000361499.7
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
ENST00000507085.5
ENST00000508844.5
ENST00000515280.5
ENST00000515323.5
CDS CAA 90 bp TCCGTGCAGTCCCGGGTAGAGAGCCCGGTCCCTGCGCTAGTCGATTaGTGCAGTAGGAAAGGAGGCTGCAGGGGATCTGCGCCGGGGCAG +
Preference number: 6 (lower is better)
Translates to: SVQSRVESPVPALVD*CSRKGGCRGSAPGQ
Trigger: CTGCCCCGGCGCAGATCCCCTGCAGCCTCCTTTCCTACTGCACAAATCGACTAGCGCAGGGACCGGGCTCTCTACCCGGGACTGCACGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514185.5
CDS GCA 72 bp CCTGCGCTAGTCGATTTGTGCAGTAGGAAAGGAGGCTaGAGGGGATCTGCGCCGGGGCAGGACAGATGCCTT +
Preference number: 6 (lower is better)
Translates to: PALVDLCSRKGG*RGSAPGQDRCL
Trigger: AAGGCATCTGTCCTGCCCCGGCGCAGATCCCCTGCAGCCTCCTTTCCTACTGCACAAATCGACTAGCGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514185.5
CDS CAA 90 bp GACTCTCATGTCCTGCCAACATCCATGGCACCGTGGCAGACTAACTaGTCAGCTTGCAAGTGGGGTAAAATCTCAGACCCTTCCCAATTC +
Preference number: 6 (lower is better)
Translates to: DSHVLPTSMAPWQTN*SACKWGKISDPSQF
Trigger: GAATTGGGAAGGGTCTGAGATTTTACCCCACTTGCAAGCTGACAAGTTAGTCTGCCACGGTGCCATGGATGTTGGCAGGACATGAGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000508844.5
ENST00000514185.5
ENST00000515280.5
CDS CCA 72 bp CATGACTCTCATGTCCTGCCAACATCCATGGCACCGTaGCAGACTAACTTGTCAGCTTGCAAGTGGGGTAAA +
Preference number: 6 (lower is better)
Translates to: HDSHVLPTSMAP*QTNLSACKWGK
Trigger: TTTACCCCACTTGCAAGCTGACAAGTTAGTCTGCCACGGTGCCATGGATGTTGGCAGGACATGAGAGTCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000508844.5
ENST00000514185.5
ENST00000515280.5
CDS TCA 72 bp CTTGCTAGTGCTATGAGCATAAACAATCCTCGACCTTaGTCCATGACTCTCATGTCCTGCCAACATCCATGG +
Preference number: 6 (lower is better)
Translates to: LASAMSINNPRP*SMTLMSCQHPW
Trigger: CCATGGATGTTGGCAGGACATGAGAGTCATGGATCAAGGTCGAGGATTGTTTATGCTCATAGCACTAGCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508844.5
ENST00000514185.5
CDS CCA 72 bp CCTTCCCAATTCTTGAAGCAGTTCTTCATAGAAATTTaGCAAATACTCGAATCTGGGTGTGATGGCACGGGC +
Preference number: 6 (lower is better)
Translates to: PSQFLKQFFIEI*QILESGCDGTG
Trigger: GCCCGTGCCATCACACCCAGATTCGAGTATTTGCCAAATTTCTATGAAGAACTGCTTCAAGAATTGGGAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508844.5
CDS CAA 90 bp TCACGGAATCTTTGTTTTGTGCTGGTGCATTTCTATTTAACCAAGTaGTCTTCACAGGGCGAGGAAAGCTTATTAGTGGCTGGTGTAGTG +
Preference number: 6 (lower is better)
Translates to: SRNLCFVLVHFYLTK*SSQGEESLLVAGVV
Trigger: CACTACACCAGCCACTAATAAGCTTTCCTCGCCCTGTGAAGACAACTTGGTTAAATAGAAATGCACCAGCACAAAACAAAGATTCCGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000393299.6
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
ENST00000505868.1
ENST00000515323.5
CDS CAA 90 bp GTCATTTTTAATTTATACCCAGAAGACTATTCTGATAACAGCACCTaGATCCATGACTCTCATGTCCTGCCAACATCCATGGCACCGTGG +
Preference number: 6 (lower is better)
Translates to: VIFNLYPEDYSDNST*IHDSHVLPTSMAPW
Trigger: CCACGGTGCCATGGATGTTGGCAGGACATGAGAGTCATGGATCAAGGTGCTGTTATCAGAATAGTCTTCTGGGTATAAATTAAAAATGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515280.5
CDS CAA 72 bp ACCGTTCCCCCTGACACAGACAACATAAGGAAGAATTaGTTTGTGGACTGCTTTGAGATTCCAGAACCAAAT +
Preference number: 6 (lower is better)
Translates to: TVPPDTDNIRKN*FVDCFEIPEPN
Trigger: ATTTGGTTCTGGAATCTCAAAGCAGTCCACAAACAAATTCTTCCTTATGTTGTCTGTGTCAGGGGGAACGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361499.7
ENST00000418814.7
CDS CAA 72 bp GCACTCCAGCCTGACACAGACAACATAAGGAAGAATTaGTTTGTGGACTGCTTTGAGATTCCAGAACCAAAT +
Preference number: 6 (lower is better)
Translates to: ALQPDTDNIRKN*FVDCFEIPEPN
Trigger: ATTTGGTTCTGGAATCTCAAAGCAGTCCACAAACAAATTCTTCCTTATGTTGTCTGTGTCAGGCTGGAGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507085.5
ENST00000508844.5
CDS CAA 90 bp TTGTCAGCTTGCAAGTGGGGTAAAATCTCAGACCCTTCCCAATTCTaGAAGCAGTTCTTCATAGAAATTTGGCAAATACTCGAATCTGGG +
Preference number: 6 (lower is better)
Translates to: LSACKWGKISDPSQF*KQFFIEIWQILESG
Trigger: CCCAGATTCGAGTATTTGCCAAATTTCTATGAAGAACTGCTTCAAGAATTGGGAAGGGTCTGAGATTTTACCCCACTTGCAAGCTGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508844.5
CDS CAA 72 bp CTTTGTTTTGTGCTGGTGCATTTCTATTTAACCAAGTaGTCTTCACAGGGCGAGGAAAGCTTATTAGTGGCT +
Preference number: 6 (lower is better)
Translates to: LCFVLVHFYLTK*SSQGEESLLVA
Trigger: AGCCACTAATAAGCTTTCCTCGCCCTGTGAAGACAACTTGGTTAAATAGAAATGCACCAGCACAAAACAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000194672.11
ENST00000361499.7
ENST00000370479.7
ENST00000393299.6
ENST00000418814.7
ENST00000457062.6
ENST00000505769.5
ENST00000505868.1
ENST00000515323.5
CDS CAA 90 bp TTGTCTGTCTCATGTAGGTCTTTGGGTCAAAATTATATCCACATATaGTGGGATCCAGACCTTCCTTCTGACTATGTGAAGGATTGCCTT +
Preference number: 6 (lower is better)
Translates to: LSVSCRSLGQNYIHI*WDPDLPSDYVKDCL
Trigger: AAGGCAATCCTTCACATAGTCAGAAGGAAGGTCTGGATCCCACAATATGTGGATATAATTTTGACCCAAAGACCTACATGAGACAGACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370479.7
ENST00000418814.7
ENST00000505868.1
CDS CAA 90 bp TTGTCAGCTTGCAAGTGGGGTAAAATCTCAGACCCTTCCCAATTCTaGAAGCAGTTCTTCATAGAAATTTGGCAAATACTCGAATCTGAC +
Preference number: 6 (lower is better)
Translates to: LSACKWGKISDPSQF*KQFFIEIWQILESD
Trigger: GTCAGATTCGAGTATTTGCCAAATTTCTATGAAGAACTGCTTCAAGAATTGGGAAGGGTCTGAGATTTTACCCCACTTGCAAGCTGACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514185.5
ENST00000515280.5
CDS CAA 90 bp CACTATCGTCCTGGGAGATATCAAGTTTACCTGAAATGGACAAATTaGCACAAAGATTTAGGTTGCCAGAGTTCAAAGGATCAAACTGGT +
Preference number: 6 (lower is better)
Translates to: HYRPGRYQVYLKWTN*HKDLGCQSSKDQTG
Trigger: ACCAGTTTGATCCTTTGAACTCTGGCAACCTAAATCTTTGTGCAAATTTGTCCATTTCAGGTAAACTTGATATCTCCCAGGACGATAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370479.7
ENST00000418814.7
ENST00000505868.1
CDS TCA 72 bp TTCTTCAGTCTCATATTTATCCATTTTACTGGACTCTaGTCTCTGAAGATTCTGAATTCCCATCCAGGGTGC +
Preference number: 6 (lower is better)
Translates to: FFSLIFIHFTGL*SLKILNSHPGC
Trigger: GCACCCTGGATGGGAATTCAGAATCTTCAGAGATCAGAGTCCAGTAAAATGGATAAATATGAGACTGAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370479.7
ENST00000393299.6
ENST00000418814.7
ENST00000505868.1
ENST00000515323.5
CDS CCA 72 bp AGCTTCCTTTTGACTTGTCTGTCTCATGTAGGTCTTTaGGTCAAAATTATATCCACATATTGTGGGATCCAG +
Preference number: 6 (lower is better)
Translates to: SFLLTCLSHVGL*VKIISTYCGIQ
Trigger: CTGGATCCCACAATATGTGGATATAATTTTGACCCAAAGACCTACATGAGACAGACAAGTCAAAAGGAAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370479.7
ENST00000418814.7
ENST00000505868.1
CDS CAA 90 bp TTGTTCAGTTCTCTCTGTATTAGTTGGCAAACAGCTAGCTTCCTTTaGACTTGTCTGTCTCATGTAGGTCTTTGGGTCAAAATTATATCC +
Preference number: 6 (lower is better)
Translates to: LFSSLCISWQTASFL*TCLSHVGLWVKIIS
Trigger: GGATATAATTTTGACCCAAAGACCTACATGAGACAGACAAGTCAAAAGGAAGCTAGCTGTTTGCCAACTAATACAGAGAGAACTGAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370479.7
ENST00000418814.7
ENST00000505868.1
CDS GCA 72 bp GAGCAAACCTACATAACCAATAATCACACAAAGCAGTaGTCAACTGCATGGGTAATCAGAGAAATGCAAATT +
Preference number: 6 (lower is better)
Translates to: EQTYITNNHTKQ*STAWVIREMQI
Trigger: AATTTGCATTTCTCTGATTACCCATGCAGTTGAGCACTGCTTTGTGTGATTATTGGTTATGTAGGTTTGCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425415.2
CDS CCA 72 bp CAGAGCTTTCTTCAGTCTCATATTTATCCATTTTACTaGACTCTGATCTCTGAAGATTCTGAATTCCCATCC +
Preference number: 6 (lower is better)
Translates to: QSFLQSHIYPFY*TLISEDSEFPS
Trigger: GGATGGGAATTCAGAATCTTCAGAGATCAGAGTCCAGTAAAATGGATAAATATGAGACTGAAGAAAGCTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370479.7
ENST00000393299.6
ENST00000418814.7
ENST00000505868.1
ENST00000515323.5
CDS CCA 72 bp CCTTCCCAATTCTTGAAGCAGTTCTTCATAGAAATTTaGCAAATACTCGAATCTGACACAGACAACATAAGG +
Preference number: 6 (lower is better)
Translates to: PSQFLKQFFIEI*QILESDTDNIR
Trigger: CCTTATGTTGTCTGTGTCAGATTCGAGTATTTGCCAAATTTCTATGAAGAACTGCTTCAAGAATTGGGAAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514185.5
ENST00000515280.5
CDS CAA 72 bp CCTGGGAGATATCAAGTTTACCTGAAATGGACAAATTaGCACAAAGATTTAGGTTGCCAGAGTTCAAAGGAT +
Preference number: 6 (lower is better)
Translates to: PGRYQVYLKWTN*HKDLGCQSSKD
Trigger: ATCCTTTGAACTCTGGCAACCTAAATCTTTGTGCAAATTTGTCCATTTCAGGTAAACTTGATATCTCCCAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370479.7
ENST00000418814.7
ENST00000505868.1
CDS CAA 72 bp ATAACAGCACCTGACACAGACAACATAAGGAAGAATTaGTTTGTGGACTGCTTTGAGATTCCAGAACCAAAT +
Preference number: 6 (lower is better)
Translates to: ITAPDTDNIRKN*FVDCFEIPEPN
Trigger: ATTTGGTTCTGGAATCTCAAAGCAGTCCACAAACAAATTCTTCCTTATGTTGTCTGTGTCAGGTGCTGTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505769.5
CDS CAA 90 bp ACATCACTGGAAGTCTCTTCATCATTAGATTCTAAGGACTCAAAGTaGGGTAGTAAATTATCCACAAGTATTTCCTCTTGTCGAAGCTCT +
Preference number: 6 (lower is better)
Translates to: TSLEVSSSLDSKDSK*GSKLSTSISSCRSS
Trigger: AGAGCTTCGACAAGAGGAAATACTTGTGGATAATTTACTACCCAACTTTGAGTCCTTAGAATCTAATGATGAAGAGACTTCCAGTGATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505769.5
CDS CAA 72 bp GAGAGAACATCTGTAGCATTGAGAGTGTTCTACTTCTaGATCTGGATAATAACTGAAAGGGTGTATGCTTTA +
Preference number: 6 (lower is better)
Translates to: ERTSVALRVFYF*IWIITERVYAL
Trigger: TAAAGCATACACCCTTTCAGTTATTATCCAGATCAAGAAGTAGAACACTCTCAATGCTACAGATGTTCTCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425415.2
CDS CAA 90 bp ATGCAAATTAAAGCCACAATAATATACCATTTCGCATCCATCAGTTaGGCAAAGTTTAAAAAGCTTGCCAGTATCAAGAGTTGGAGAGTG +
Preference number: 6 (lower is better)
Translates to: MQIKATIIYHFASIS*AKFKKLASIKSWRV
Trigger: CACTCTCCAACTCTTGATACTGGCAAGCTTTTTAAACTTTGCCAAACTGATGGATGCGAAATGGTATATTATTGTGGCTTTAATTTGCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425415.2
CDS TCA 72 bp AGACAACATAAGGAAGAATTTGTTTGTGGACTGCTTTaGGATTCCAGAACCAAATACATAATCCAGTTGATC +
Preference number: 6 (lower is better)
Translates to: RQHKEEFVCGLL*DSRTKYIIQLI
Trigger: GATCAACTGGATTATGTATTTGGTTCTGGAATCTCAAAGCAGTCCACAAACAAATTCTTCCTTATGTTGTCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000361499.7
ENST00000418814.7
ENST00000505769.5
ENST00000507085.5
ENST00000508844.5
ENST00000514185.5
ENST00000515280.5
CDS CAA 72 bp ATGCCAGGACATATACATAAGAATGTTCATAGCAGCTaGGTTTGTAATAGCCACAAGTTAGAAGTAATCCAA +
Preference number: 6 (lower is better)
Translates to: MPGHIHKNVHSS*VCNSHKLEVIQ
Trigger: TTGGATTACTTCTAACTTGTGGCTATTACAAACCAAGCTGCTATGAACATTCTTATGTATATGTCCTGGCAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425415.2
CDS CAA 72 bp AAAGCCACAATAATATACCATTTCGCATCCATCAGTTaGGCAAAGTTTAAAAAGCTTGCCAGTATCAAGAGT +
Preference number: 6 (lower is better)
Translates to: KATIIYHFASIS*AKFKKLASIKS
Trigger: ACTCTTGATACTGGCAAGCTTTTTAAACTTTGCCAAACTGATGGATGCGAAATGGTATATTATTGTGGCTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425415.2
CDS TCA 72 bp CTCCTGGCCAACTTTTTAAAGTCTTCTGTAAGTTTCTaGTTATACTTTAGAAGCTTTACAGTTTTGCCTTTC +
Preference number: 6 (lower is better)
Translates to: LLANFLKSSVSF*LYFRSFTVLPF
Trigger: GAAAGGCAAAACTGTAAAGCTTCTAAAGTATAATCAGAAACTTACAGAAGACTTTAAAAAGTTGGCCAGGAG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425415.2
CDS CCA 72 bp AGATTGTGTTCCATTTGTGTAATTTCACTATCGTCCTaGGAGATATCAAGTTTACCTGAAATGGACAAATTT +
Preference number: 6 (lower is better)
Translates to: RLCSICVISLSS*EISSLPEMDKF
Trigger: AAATTTGTCCATTTCAGGTAAACTTGATATCTCCCAGGACGATAGTGAAATTACACAAATGGAACACAATCT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370479.7
ENST00000418814.7
ENST00000505868.1