RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM133B (Homo sapiens)

Ensembl gene IDs: ENSG00000234545

Ensembl transcript IDs: ENST00000427372.5, ENST00000481407.5

Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp TATTGGGTTCATATAGGCCTGGGGCGGCCGATACCAAGGGGCGGGTaGGTCGGATGCGTCCAAGGGCCTAAGTCTTCGGAGTTACATGGC +
Preference number: 5 (lower is better)
Translates to: YWVHIGLGRPIPRGG*VGCVQGPKSSELHG
Trigger: GCCATGTAACTCCGAAGACTTAGGCCCTTGGACGCATCCGACTCACCCGCCCCTTGGTATCGGCCGCCCCAGGCCTATATGAACCCAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427372.5
CDS TCA 72 bp CATATAGGCCTGGGGCGGCCGATACCAAGGGGCGGGTaGGTCGGATGCGTCCAAGGGCCTAAGTCTTCGGAG +
Preference number: 6 (lower is better)
Translates to: HIGLGRPIPRGG*VGCVQGPKSSE
Trigger: CTCCGAAGACTTAGGCCCTTGGACGCATCCGACTCACCCGCCCCTTGGTATCGGCCGCCCCAGGCCTATATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427372.5
CDS CAA 72 bp AAATCACTCTTCACAATCAAAGAACCTCTAAGTTCCTaGACTCATCTGGAGTTTAAGCTACCTTTAGCATAC +
Preference number: 6 (lower is better)
Translates to: KSLFTIKEPLSS*THLEFKLPLAY
Trigger: GTATGCTAAAGGTAGCTTAAACTCCAGATGAGTCAAGGAACTTAGAGGTTCTTTGATTGTGAAGAGTGATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481407.5
CDS CAA 90 bp GATAGAACAAAATCACTCTTCACAATCAAAGAACCTCTAAGTTCCTaGACTCATCTGGAGTTTAAGCTACCTTTAGCATACAGGTTAAAC +
Preference number: 6 (lower is better)
Translates to: DRTKSLFTIKEPLSS*THLEFKLPLAYRLN
Trigger: GTTTAACCTGTATGCTAAAGGTAGCTTAAACTCCAGATGAGTCAAGGAACTTAGAGGTTCTTTGATTGTGAAGAGTGATTTTGTTCTATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481407.5