RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM131A (Homo sapiens)

Ensembl gene IDs: ENSG00000175182

Ensembl transcript IDs: ENST00000310585.4, ENST00000340957.9, ENST00000383847.7, ENST00000418281.5, ENST00000418768.5, ENST00000433578.5, ENST00000450976.5, ENST00000453072.5, ENST00000487702.1, ENST00000497070.1, ENST00000639617.1

Found 724 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTCCCGCTCAGAGAGCTCTGCGTGAATGGGCAGCCCGGCTGGCTGTaGGGCGCCAGCACACTGCCCGCACATCCTAGGAGGGGTTGGGAA +
Preference number: 1 (lower is better)
Translates to: LPLRELCVNGQPGWL*GASTLPAHPRRGWE
Trigger: TTCCCAACCCCTCCTAGGATGTGCGGGCAGTGTGCTGGCGCCTCACAGCCAGCCGGGCTGCCCATTCACGCAGAGCTCTCTGAGCGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
3UTR TCA 90 bp CTCCCCCGGGAGGGCAGCCCTTCCGACAGCGACGACAAATGCCAATaGGCCCCTCGTGGGTGGCCTAGGATGGTGCTAGCCATGCCCGTC +
Preference number: 1 (lower is better)
Translates to: LPREGSPSDSDDKCQ*APRGWPRMVLAMPV
Trigger: GACGGGCATGGCTAGCACCATCCTAGGCCACCCACGAGGGGCTCATTGGCATTTGTCGTCGCTGTCGGAAGGGCTGCCCTCCCGGGGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639617.1
3UTR TCA 90 bp TCCAGCTCCGGAAGGCCATCGAGGGCTCTGTCACAGCACAGGGTGTaGAAGTCCGGCCGCCCCTCGCCAGCTTCCGAGACAGTGCCACCA +
Preference number: 1 (lower is better)
Translates to: SSSGRPSRALSQHRV*KSGRPSPASETVPP
Trigger: TGGTGGCACTGTCTCGGAAGCTGGCGAGGGGCGGCCGGACTTTCACACCCTGTGCTGTGACAGAGCCCTCGATGGCCTTCCGGAGCTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639617.1
3UTR CCA 90 bp CAGGACTGGGGTTGTGCGTCCCTCTCCGGTGTGATGAAAAGTGACTaGGGCTGCACAGCCACTCCTGAGGACCCGCCTGGAACAAGTCAC +
Preference number: 1 (lower is better)
Translates to: QDWGCASLSGVMKSD*GCTATPEDPPGTSH
Trigger: GTGACTTGTTCCAGGCGGGTCCTCAGGAGTGGCTGTGCAGCCCCAGTCACTTTTCATCACACCGGAGAGGGACGCACAACCCCAGTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639617.1
3UTR TCA 90 bp CCCGGCCACCCCTGTGGCCCTCTTGTGGCCCTCTCTAGAAGAACATaGAGTCCCAGCTCTGTGGCAACCAGAGCCATCCTTTCTTCCACC +
Preference number: 1 (lower is better)
Translates to: PGHPCGPLVALSRRT*SPSSVATRAILSST
Trigger: GGTGGAAGAAAGGATGGCTCTGGTTGCCACAGAGCTGGGACTTCATGTTCTTCTAGAGAGGGCCACAAGAGGGCCACAGGGGTGGCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
3UTR TCA 90 bp GAGGCTTATGTCCAGCTCACCTGGGGAGGAAGGCGGGGAGGAGTCTaGCATCTGGGTCCAGACATCTGTCCCTCTCACCTTTCCAGCTCC +
Preference number: 1 (lower is better)
Translates to: EAYVQLTWGGRRGGV*HLGPDICPSHLSSS
Trigger: GGAGCTGGAAAGGTGAGAGGGACAGATGTCTGGACCCAGATGTCAGACTCCTCCCCGCCTTCCTCCCCAGGTGAGCTGGACATAAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639617.1
3UTR GCA 90 bp GCTAGCCATGCCCGTCAGCCCAGAATGTGCATCTTTCATTCCTTCTaGCTTCGGAAGGCAGGAGGCAGCTACAGCTGGAGGCTGCACCCC +
Preference number: 1 (lower is better)
Translates to: ASHARQPRMCIFHSF*LRKAGGSYSWRLHP
Trigger: GGGGTGCAGCCTCCAGCTGTAGCTGCCTCCTGCCTTCCGAAGGCAGAAGGAATGAAAGATGCACATTCTGGGCTGACGGGCATGGCTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639617.1
3UTR TCA 90 bp CCCATAGGCTCCGGGAGGGCAGGAGCCAGCCCCTCCAGGTGGGGGTaGTTCTATCAAGCACTGCACATGGACTCGGAAGTGAGAAGAAAA +
Preference number: 1 (lower is better)
Translates to: PIGSGRAGASPSRWG*FYQALHMDSEVRRK
Trigger: TTTTCTTCTCACTTCCGAGTCCATGTGCAGTGCTTGATAGAATCACCCCCACCTGGAGGGGCTGGCTCCTGCCCTCCCGGAGCCTATGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
3UTR CCA 90 bp CCCCCTCCAGACCTGGGGTGCCAGCTTCTCCCAGTTCATCCTACCTaGAATCTGACCCACTACCCACCTGCAACAAGTCTTCCAGAGGCA +
Preference number: 1 (lower is better)
Translates to: PPPDLGCQLLPVHPT*NLTHYPPATSLPEA
Trigger: TGCCTCTGGAAGACTTGTTGCAGGTGGGTAGTGGGTCAGATTCCAGGTAGGATGAACTGGGAGAAGCTGGCACCCCAGGTCTGGAGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639617.1
3UTR CCA 90 bp GACTCCAAACCTGGCCAGCCAGGTAGGAGGGCAACTGAGAAGCAGTaGAACGAGAGGCATAGGATTCAGGGCCCAAGTGCCCTTAAGGTC +
Preference number: 1 (lower is better)
Translates to: DSKPGQPGRRATEKQ*NERHRIQGPSALKV
Trigger: GACCTTAAGGGCACTTGGGCCCTGAATCCTATGCCTCTCGTTCCACTGCTTCTCAGTTGCCCTCCTACCTGGCTGGCCAGGTTTGGAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639617.1
3UTR CCA 90 bp CGGTGTGGGCTCTCCCTTCTCGGTATATCTGCAACTAAACAGGACTaGGGTTGTGCGTCCCTCTCCGGTGTGATGAAAAGTGACTGGGGC +
Preference number: 1 (lower is better)
Translates to: RCGLSLLGISATKQD*GCASLSGVMKSDWG
Trigger: GCCCCAGTCACTTTTCATCACACCGGAGAGGGACGCACAACCCCAGTCCTGTTTAGTTGCAGATATACCGAGAAGGGAGAGCCCACACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639617.1
3UTR TCA 90 bp CAGACCTGGGGTGCCAGCTTCTCCCAGTTCATCCTACCTGGAATCTaGCCCACTACCCACCTGCAACAAGTCTTCCAGAGGCAGGAAGAT +
Preference number: 1 (lower is better)
Translates to: QTWGASFSQFILPGI*PTTHLQQVFQRQED
Trigger: ATCTTCCTGCCTCTGGAAGACTTGTTGCAGGTGGGTAGTGGGTCAGATTCCAGGTAGGATGAACTGGGAGAAGCTGGCACCCCAGGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639617.1
3UTR GCA 90 bp GCTGCTTGGACCCTAGAAAAGGCAGACTGTATGAGAGGCATAGCGTaGTTCAGGCCAAGACTGGAATGCCAGAGCAGGGGAGAGAGACTC +
Preference number: 1 (lower is better)
Translates to: AAWTLEKADCMRGIA*FRPRLECQSRGERL
Trigger: GAGTCTCTCTCCCCTGCTCTGGCATTCCAGTCTTGGCCTGAAGCACGCTATGCCTCTCATACAGTCTGCCTTTTCTAGGGTCCAAGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639617.1
3UTR CCA 90 bp GTGACCGTTGTCCTCCTGGACTGCAAGCTGCATCTCAACAGAACTTaGGATGCTGCTTGGACCCTAGAAAAGGCAGACTGTATGAGAGGC +
Preference number: 1 (lower is better)
Translates to: VTVVLLDCKLHLNRT*DAAWTLEKADCMRG
Trigger: GCCTCTCATACAGTCTGCCTTTTCTAGGGTCCAAGCAGCATCCCAAGTTCTGTTGAGATGCAGCTTGCAGTCCAGGAGGACAACGGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639617.1
3UTR GCA 90 bp TGTCCTCCTGGACTGCAAGCTGCATCTCAACAGAACTTGGGATGCTaGTTGGACCCTAGAAAAGGCAGACTGTATGAGAGGCATAGCGTG +
Preference number: 1 (lower is better)
Translates to: CPPGLQAASQQNLGC*LDPRKGRLYERHSV
Trigger: CACGCTATGCCTCTCATACAGTCTGCCTTTTCTAGGGTCCAAGCAGCATCCCAAGTTCTGTTGAGATGCAGCTTGCAGTCCAGGAGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639617.1
3UTR GCA 90 bp CGTTGTCCTCCTGGACTGCAAGCTGCATCTCAACAGAACTTGGGATaGTGCTTGGACCCTAGAAAAGGCAGACTGTATGAGAGGCATAGC +
Preference number: 1 (lower is better)
Translates to: RCPPGLQAASQQNLG*CLDPRKGRLYERHS
Trigger: GCTATGCCTCTCATACAGTCTGCCTTTTCTAGGGTCCAAGCAGCATCCCAAGTTCTGTTGAGATGCAGCTTGCAGTCCAGGAGGACAACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639617.1
3UTR GCA 90 bp CAAGAAAAACATGGGAAGATGGGGGTGACCGTTGTCCTCCTGGACTaGAAGCTGCATCTCAACAGAACTTGGGATGCTGCTTGGACCCTA +
Preference number: 1 (lower is better)
Translates to: QEKHGKMGVTVVLLD*KLHLNRTWDAAWTL
Trigger: TAGGGTCCAAGCAGCATCCCAAGTTCTGTTGAGATGCAGCTTGCAGTCCAGGAGGACAACGGTCACCCCCATCTTCCCATGTTTTTCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000639617.1
3UTR CCA 90 bp CTCCTGGACTGCAAGCTGCATCTCAACAGAACTTGGGATGCTGCTTaGACCCTAGAAAAGGCAGACTGTATGAGAGGCATAGCGTGCTTC +
Preference number: 1 (lower is better)
Translates to: LLDCKLHLNRTWDAA*TLEKADCMRGIACF
Trigger: GAAGCACGCTATGCCTCTCATACAGTCTGCCTTTTCTAGGGTCCAAGCAGCATCCCAAGTTCTGTTGAGATGCAGCTTGCAGTCCAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639617.1
3UTR TCA 90 bp TCACATTATCCGAGGAGGAAATGTGTGTGTGGCATTTTAAGAACATaGACATCACTGTCTGCCACAGCTGTAGCCATGCCCCAGAGGCCC +
Preference number: 1 (lower is better)
Translates to: SHYPRRKCVCGILRT*TSLSATAVAMPQRP
Trigger: GGGCCTCTGGGGCATGGCTACAGCTGTGGCAGACAGTGATGTTCATGTTCTTAAAATGCCACACACACATTTCCTCCTCGGATAATGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
3UTR GCA 90 bp CAATCGCTTTTCTCCCCACACTGCAGACTCACACTATCTTCTCACTaGTGGGAGTGGACCATGCTTATGTCACCAGTATTGGCAGACTCA +
Preference number: 1 (lower is better)
Translates to: QSLFSPHCRLTLSSH*WEWTMLMSPVLADS
Trigger: TGAGTCTGCCAATACTGGTGACATAAGCATGGTCCACTCCCAGCAGTGAGAAGATAGTGTGAGTCTGCAGTGTGGGGAGAAAAGCGATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639617.1
3UTR CCA 90 bp GCTGGGAGTGGACCATGCTTATGTCACCAGTATTGGCAGACTCATTaGAATCGTTACTCTAAAGGAGGTGAGGTGATGGTGGCCTCCAAA +
Preference number: 1 (lower is better)
Translates to: AGSGPCLCHQYWQTH*NRYSKGGEVMVASK
Trigger: TTTGGAGGCCACCATCACCTCACCTCCTTTAGAGTAACGATTCCAATGAGTCTGCCAATACTGGTGACATAAGCATGGTCCACTCCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639617.1
3UTR CCA 90 bp TTCTCCCCACACTGCAGACTCACACTATCTTCTCACTGCTGGGAGTaGACCATGCTTATGTCACCAGTATTGGCAGACTCATTGGAATCG +
Preference number: 1 (lower is better)
Translates to: FSPHCRLTLSSHCWE*TMLMSPVLADSLES
Trigger: CGATTCCAATGAGTCTGCCAATACTGGTGACATAAGCATGGTCCACTCCCAGCAGTGAGAAGATAGTGTGAGTCTGCAGTGTGGGGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639617.1
3UTR CCA 90 bp TATCTTCTCACTGCTGGGAGTGGACCATGCTTATGTCACCAGTATTaGCAGACTCATTGGAATCGTTACTCTAAAGGAGGTGAGGTGATG +
Preference number: 1 (lower is better)
Translates to: YLLTAGSGPCLCHQY*QTHWNRYSKGGEVM
Trigger: CATCACCTCACCTCCTTTAGAGTAACGATTCCAATGAGTCTGCCAATACTGGTGACATAAGCATGGTCCACTCCCAGCAGTGAGAAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639617.1
3UTR-3UTR GCA 90 bp CCTCCCGCTCAGAGAGCTCTGCGTGAATGGGCAGCCCGGCTGGCTGTGAGGCGCGCAGCAGCCGGGGGATaGATGCCACTGCCAGGCATG +
Preference number: 2 (lower is better)
Translates to: PPAQRALREWAARLAVRRAAAGG*MPLPGM
Trigger: CATGCCTGGCAGTGGCATGCATCCCCCGGCTGCTGC...GCGCCTCACAGCCAGCCGGGCTGCCCATTCACGCAGAGCTCTCTGAGCGGGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
3UTR CAA 90 bp AGCGCTCCCAGGAGCCCTCTAGGCTGTGGAGCTCTGCTGGGAGCCTaGAGCCCACACTTGGGCACAGAGGCTCTGCCCCTGGCAGCAGCC +
Preference number: 2 (lower is better)
Translates to: SAPRSPLGCGALLGA*SPHLGTEALPLAAA
Trigger: GGCTGCTGCCAGGGGCAGAGCCTCTGTGCCCAAGTGTGGGCTCAAGGCTCCCAGCAGAGCTCCACAGCCTAGAGGGCTCCTGGGAGCGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
3UTR-3UTR GCA 90 bp TCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGCTGGGGTGGGGCCCGAGGCGCCAGCACACTaGCCGCACATCCTAGGAGGG +
Preference number: 2 (lower is better)
Translates to: SARGLHYVGINTLAGVGPEAPAH*PHILGG
Trigger: CCCTCCTAGGATGTGCGGGCAGTGTGCTGGCGCCTC...GGGCCCCACCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
3UTR-3UTR GCA 90 bp TCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGCTGGGGTGGGGCCCCCGCTCAGAGAGCTCTaGGTGAATGGGCAGCCCGGC +
Preference number: 2 (lower is better)
Translates to: SARGLHYVGINTLAGVGPPLREL*VNGQPG
Trigger: GCCGGGCTGCCCATTCACGCAGAGCTCTCTGAGCGG...GGGCCCCACCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
3UTR-3UTR CCA 90 bp GTCATGGCCTCCCCCGGGAGGGCAGCCCTTCCGACAGCGACGACAAATGCCAATGGAGGCAGCTACAGCTaGAGGCTGCACCCCAGCCCC +
Preference number: 2 (lower is better)
Translates to: VMASPGRAALPTATTNANGGSYS*RLHPSP
Trigger: GGGGCTGGGGTGCAGCCTCCAGCTGTAGCTGCCTCC...ATTGGCATTTGTCGTCGCTGTCGGAAGGGCTGCCCTCCCGGGGGAGGCCATGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639617.1
3UTR-3UTR TCA 90 bp GCGCCAGCACACTGCCCGCACATCCTAGGAGGGGTTGGGAAAGGGCCCAGGCCCCCCTCCAGGTGGGGGTaGTTCTATCAAGCACTGCAC +
Preference number: 2 (lower is better)
Translates to: APAHCPHILGGVGKGPRPPSRWG*FYQALH
Trigger: GTGCAGTGCTTGATAGAATCACCCCCACCTGGAGGG...GGGCCTGGGCCCTTTCCCAACCCCTCCTAGGATGTGCGGGCAGTGTGCTGGCGC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
3UTR-3UTR GCA 90 bp CCCAGGAGCCCTCTAGGCTGTGGAGCTCTGCTGGGAGCCTTGAGCCCACACTTGGCAGCAGCCGGGGGATaGATGCCACTGCCAGGCATG +
Preference number: 2 (lower is better)
Translates to: PRSPLGCGALLGALSPHLAAAGG*MPLPGM
Trigger: CATGCCTGGCAGTGGCATGCATCCCCCGGCTGCTGC...CAAGTGTGGGCTCAAGGCTCCCAGCAGAGCTCCACAGCCTAGAGGGCTCCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
3UTR-3UTR TCA 90 bp CCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGGCAGCCCGGCTGGCTGTaGGGCGCCAGCACACTGCCC +
Preference number: 2 (lower is better)
Translates to: PVGSRSYLGPSYLPKPTRQPGWL*GASTLP
Trigger: GGGCAGTGTGCTGGCGCCTCACAGCCAGCCGGGCTG...CCTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
3UTR-3UTR GCA 90 bp GCTTGTGCCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTGGGCACAGAGGCTCTaGCCCTGGCAGCAGCCGGGG +
Preference number: 2 (lower is better)
Translates to: ACARWLSFLPWALLPAKAWAQRL*PWQQPG
Trigger: CCCCGGCTGCTGCCAGGGGCAGAGCCTCTGTGCCCA...GGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGGCACAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
3UTR-3UTR CCA 90 bp AGCCATCCTTTCTTCCACCTCCCGCTCAGAGAGCTCTGCGTGAATGGGCAGCCCCAGCACGAGCCCAGCTaGGCAGGGGCCCTTGAGGGA +
Preference number: 2 (lower is better)
Translates to: SHPFFHLPLRELCVNGQPQHEPS*AGALEG
Trigger: TCCCTCAAGGGCCCCTGCCCAGCTGGGCTCGTGCTG...GGGCTGCCCATTCACGCAGAGCTCTCTGAGCGGGAGGTGGAAGAAAGGATGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000639617.1
3UTR-3UTR CCA 90 bp CCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGCTGGGGTGGGGCCCTGTACATCCTAGGAGGGGTTaGGAAAGGGCCCAGGCCCCA +
Preference number: 2 (lower is better)
Translates to: PEASTTWALTPWLGWGPVHPRRG*ERAQAP
Trigger: TGGGGCCTGGGCCCTTTCCCAACCCCTCCTAGGATG...TACAGGGCCCCACCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
3UTR-3UTR TCA 90 bp TCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGCTGGGGTGGGGCCCCCCTCCAGGTGGGGGTaGTTCTATCAAGCACTGCAC +
Preference number: 2 (lower is better)
Translates to: SARGLHYVGINTLAGVGPPSRWG*FYQALH
Trigger: GTGCAGTGCTTGATAGAATCACCCCCACCTGGAGGG...GGGCCCCACCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
3UTR-3UTR TCA 90 bp AGCCATCCTTTCTTCCACCTCCCGCTCAGAGAGCTCTGCGTGAATGGGCAGCCCCTGGGCAGGGGCCCTTaGGGGACGGCTCAACCCATA +
Preference number: 2 (lower is better)
Translates to: SHPFFHLPLRELCVNGQPLGRGP*GTAQPI
Trigger: TATGGGTTGAGCCGTCCCTCAAGGGCCCCTGCCCAG...GGGCTGCCCATTCACGCAGAGCTCTCTGAGCGGGAGGTGGAAGAAAGGATGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
3UTR-3UTR TCA 90 bp ATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGCTGGGGCTCTGCTGGGAGCCTTaGGCCCACACTTGGGCACAG +
Preference number: 2 (lower is better)
Translates to: MQDLPEASTTWALTPWLGLCWEP*AHTWAQ
Trigger: CTGTGCCCAAGTGTGGGCTCAAGGCTCCCAGCAGAG...CCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
3UTR-3UTR GCA 90 bp GTGGCCCTCTTGTGGCCCTCTCTAGAAGAACATGAAGTCCCAGCTCTGTGGCAATGGGCACAGAGGCTCTaGCCCTGGCAGCAGCCGGGG +
Preference number: 2 (lower is better)
Translates to: VALLWPSLEEHEVPALWQWAQRL*PWQQPG
Trigger: CCCCGGCTGCTGCCAGGGGCAGAGCCTCTGTGCCCA...TTGCCACAGAGCTGGGACTTCATGTTCTTCTAGAGAGGGCCACAAGAGGGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
3UTR-3UTR GCA 90 bp AACACCCTGGCTGGGGTGGGGCCCTGTACTGTAGCCTTGGCCTTTCATTCAGACGAGGCGCCAGCACACTaGCCGCACATCCTAGGAGGG +
Preference number: 2 (lower is better)
Translates to: NTLAGVGPCTVALAFHSDEAPAH*PHILGG
Trigger: CCCTCCTAGGATGTGCGGGCAGTGTGCTGGCGCCTC...GTCTGAATGAAAGGCCAAGGCTACAGTACAGGGCCCCACCCCAGCCAGGGTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
3UTR-3UTR GCA 90 bp CTTGGAATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGGCAGCAGCCGGGGGATaGATGCCACTGCCAGGCATG +
Preference number: 2 (lower is better)
Translates to: LGMQDLPEASTTWALTPWAAAGG*MPLPGM
Trigger: CATGCCTGGCAGTGGCATGCATCCCCCGGCTGCTGC...CCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCATTCCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
3UTR-3UTR GCA 90 bp GCGCCAGCACACTGCCCGCACATCCTAGGAGGGGTTGGGAAAGGGCCCAGGCCCAGGGTGGAGGGTACATaGTTTCATCATTCCAAAGCC +
Preference number: 2 (lower is better)
Translates to: APAHCPHILGGVGKGPRPRVEGT*FHHSKA
Trigger: GGCTTTGGAATGATGAAAGCATGTACCCTCCACCCT...GGGCCTGGGCCCTTTCCCAACCCCTCCTAGGATGTGCGGGCAGTGTGCTGGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000639617.1
3UTR-3UTR CCA 90 bp GCAGCAGTGACACGGAGACCACTGAGGTGCATGCACTCTGGGGGCCCCACTCCCGAAGTCCCAGCTCTGTaGCAACCAGAGCCATCCTTT +
Preference number: 2 (lower is better)
Translates to: AAVTRRPLRCMHSGGPTPEVPAL*QPEPSF
Trigger: AAAGGATGGCTCTGGTTGCCACAGAGCTGGGACTTC...GGGAGTGGGGCCCCCAGAGTGCATGCACCTCAGTGGTCTCCGTGTCACTGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639617.1
3UTR-3UTR TCA 90 bp CGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGGCCCTCTGCTGGGAGCCTTaGGCCCACACTTGGGCACAG +
Preference number: 2 (lower is better)
Translates to: RWLSFLPWALLPAKAYKALCWEP*AHTWAQ
Trigger: CTGTGCCCAAGTGTGGGCTCAAGGCTCCCAGCAGAG...GGCCTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
3UTR-3UTR CCA 90 bp GGCTCAGGTGATCCTCACAACTCAGCGCCCCCAAGTAGCTGGGACTGCAGGCATACACCAACCTTGTCCTaGGCCCCTGTGGCCTGTCAT +
Preference number: 2 (lower is better)
Translates to: GSGDPHNSAPPSSWDCRHTPTLS*APVACH
Trigger: ATGACAGGCCACAGGGGCCCAGGACAAGGTTGGTGT...ATGCCTGCAGTCCCAGCTACTTGGGGGCGCTGAGTTGTGAGGATCACCTGAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639617.1
3UTR-3UTR TCA 90 bp TCATGGCCTCCCCCGGGAGGGCAGCCCTTCCGACAGCGACGACAAATGCCAATGCTCTCTAGAAGAACATaGAGTCCCAGCTCTGTGGCA +
Preference number: 2 (lower is better)
Translates to: SWPPPGGQPFRQRRQMPMLSRRT*SPSSVA
Trigger: TGCCACAGAGCTGGGACTTCATGTTCTTCTAGAGAG...CATTGGCATTTGTCGTCGCTGTCGGAAGGGCTGCCCTCCCGGGGGAGGCCATGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639617.1
3UTR-3UTR CCA 90 bp CTTGGAATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGGAGCCCTCTAGGCTGTaGAGCTCTGCTGGGAGCCTT +
Preference number: 2 (lower is better)
Translates to: LGMQDLPEASTTWALTPWEPSRL*SSAGSL
Trigger: AAGGCTCCCAGCAGAGCTCCACAGCCTAGAGGGCTC...CCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCATTCCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
3UTR-3UTR CCA 90 bp CCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGGGAGCCCTCTAGGCTGTaGAGCTCTGCTGGGAGCCTT +
Preference number: 2 (lower is better)
Translates to: PVGSRSYLGPSYLPKPTREPSRL*SSAGSL
Trigger: AAGGCTCCCAGCAGAGCTCCACAGCCTAGAGGGCTC...CCTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
3UTR-3UTR CCA 90 bp GGCCTCCACTACGTGGGCATTAACACCCTGGCTGGGGTGGGGCCCTGTACTGTAGGGCCAGGAAAAGGGTaGAGGGTACATGCTTTCATC +
Preference number: 2 (lower is better)
Translates to: GLHYVGINTLAGVGPCTVGPGKG*RVHAFI
Trigger: GATGAAAGCATGTACCCTCCACCCTTTTCCTGGCCC...TACAGTACAGGGCCCCACCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000639617.1
3UTR-3UTR CCA 90 bp CTTTCATTCCTTCTGCCTTCGGAAGGCAGGAGGCAGCTACAGCTGGAGGCTGCACCTGGCAGGATGGGTTaGGGTCACTTGACCCCTGCT +
Preference number: 2 (lower is better)
Translates to: LSFLLPSEGRRQLQLEAAPGRMG*GHLTPA
Trigger: AGCAGGGGTCAAGTGACCCCAACCCATCCTGCCAGG...TGCAGCCTCCAGCTGTAGCTGCCTCCTGCCTTCCGAAGGCAGAAGGAATGAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639617.1
3UTR-3UTR TCA 90 bp GGCCTCCACTACGTGGGCATTAACACCCTGGCTGGGGTGGGGCCCTGTACTGTACTCTCTAGAAGAACATaGAGTCCCAGCTCTGTGGCA +
Preference number: 2 (lower is better)
Translates to: GLHYVGINTLAGVGPCTVLSRRT*SPSSVA
Trigger: TGCCACAGAGCTGGGACTTCATGTTCTTCTAGAGAG...TACAGTACAGGGCCCCACCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
3UTR-3UTR CCA 90 bp AACATGAAGTCCCAGCTCTGTGGCAACCAGAGCCATCCTTTCTTCCACCTCCCGGAGCCCTCTAGGCTGTaGAGCTCTGCTGGGAGCCTT +
Preference number: 2 (lower is better)
Translates to: NMKSQLCGNQSHPFFHLPEPSRL*SSAGSL
Trigger: AAGGCTCCCAGCAGAGCTCCACAGCCTAGAGGGCTC...CGGGAGGTGGAAGAAAGGATGGCTCTGGTTGCCACAGAGCTGGGACTTCATGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
3UTR-3UTR CCA 90 bp AATGCTTGTGCCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAACATCCTAGGAGGGGTTaGGAAAGGGCCCAGGCCCCA +
Preference number: 2 (lower is better)
Translates to: NACARWLSFLPWALLPAKHPRRG*ERAQAP
Trigger: TGGGGCCTGGGCCCTTTCCCAACCCCTCCTAGGATG...TTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGGCACAAGCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
3UTR-3UTR CCA 90 bp AATGCTTGTGCCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAAGAGCTCTGCGTGAATaGGCAGCCCGGCTGGCTGTG +
Preference number: 2 (lower is better)
Translates to: NACARWLSFLPWALLPAKRALRE*AARLAV
Trigger: CACAGCCAGCCGGGCTGCCCATTCACGCAGAGCTCT...TTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGGCACAAGCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
3UTR CAA 90 bp GTGGGCATTAACACCCTGGCTGGGGTGGGGCCCTGTACTGTAGCCTaGGCCTTTCATTCAGACAGAAAGGCTCTACCTTCTTTCCTCCCC +
Preference number: 2 (lower is better)
Translates to: VGINTLAGVGPCTVA*AFHSDRKALPSFLP
Trigger: GGGGAGGAAAGAAGGTAGAGCCTTTCTGTCTGAATGAAAGGCCAAGGCTACAGTACAGGGCCCCACCCCAGCCAGGGTGTTAATGCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
3UTR-3UTR GCA 90 bp ATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGCTGGGGATGAACATCACTGTCTaGCACAGCTGTAGCCATGCC +
Preference number: 2 (lower is better)
Translates to: MQDLPEASTTWALTPWLGMNITV*HSCSHA
Trigger: GGCATGGCTACAGCTGTGGCAGACAGTGATGTTCAT...CCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
3UTR-3UTR GCA 90 bp CTTTCATTCCTTCTGCCTTCGGAAGGCAGGAGGCAGCTACAGCTGGAGGCTGCACACTGGCACAATTCCTaGCTCTCAGCAGGCATCAGC +
Preference number: 2 (lower is better)
Translates to: LSFLLPSEGRRQLQLEAAHWHNS*LSAGIS
Trigger: GCTGATGCCTGCTGAGAGGCAGGAATTGTGCCAGTG...TGCAGCCTCCAGCTGTAGCTGCCTCCTGCCTTCCGAAGGCAGAAGGAATGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639617.1
3UTR-3UTR GCA 90 bp TGCCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAACCTCCAGACCTGGGGTaGCAGCTTCTCCCAGTTCAT +
Preference number: 2 (lower is better)
Translates to: CPLALVLTLGPLTCQSLQPPDLG*QLLPVH
Trigger: ATGAACTGGGAGAAGCTGGCACCCCAGGTCTGGAGG...TTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639617.1
3UTR CAA 90 bp GCACAGCCACTCCTGAGGACCCGCCTGGAACAAGTCACTTCACTGTaGAGCCCCATGCTGCTTCTCCTAATGCTTAGTTCTCAGGACAGT +
Preference number: 2 (lower is better)
Translates to: AQPLLRTRLEQVTSL*SPMLLLLMLSSQDS
Trigger: ACTGTCCTGAGAACTAAGCATTAGGAGAAGCAGCATGGGGCTCAACAGTGAAGTGACTTGTTCCAGGCGGGTCCTCAGGAGTGGCTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639617.1
3UTR-3UTR TCA 90 bp CACAACCATAAAAACGTACAGTCCAGTGACCTTGGAATGCAGGATCTGCCAGAGCTCTGCTGGGAGCCTTaGGCCCACACTTGGGCACAG +
Preference number: 2 (lower is better)
Translates to: HNHKNVQSSDLGMQDLPELCWEP*AHTWAQ
Trigger: CTGTGCCCAAGTGTGGGCTCAAGGCTCCCAGCAGAG...CTCTGGCAGATCCTGCATTCCAAGGTCACTGGACTGTACGTTTTTATGGTTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
3UTR-3UTR GCA 90 bp CCTTGGAATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGATGAACATCACTGTCTaGCACAGCTGTAGCCATGCC +
Preference number: 2 (lower is better)
Translates to: PWNAGSARGLHYVGINTLMNITV*HSCSHA
Trigger: GGCATGGCTACAGCTGTGGCAGACAGTGATGTTCAT...CAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCATTCCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
3UTR CAA 90 bp GGTGACCGTTGTCCTCCTGGACTGCAAGCTGCATCTCAACAGAACTaGGGATGCTGCTTGGACCCTAGAAAAGGCAGACTGTATGAGAGG +
Preference number: 2 (lower is better)
Translates to: GDRCPPGLQAASQQN*GCCLDPRKGRLYER
Trigger: CCTCTCATACAGTCTGCCTTTTCTAGGGTCCAAGCAGCATCCCAAGTTCTGTTGAGATGCAGCTTGCAGTCCAGGAGGACAACGGTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639617.1
3UTR-3UTR TCA 90 bp AGCCATCCTTTCTTCCACCTCCCGCTCAGAGAGCTCTGCGTGAATGGGCAGCCCGGCATTTTAAGAACATaGACATCACTGTCTGCCACA +
Preference number: 2 (lower is better)
Translates to: SHPFFHLPLRELCVNGQPGILRT*TSLSAT
Trigger: TGTGGCAGACAGTGATGTTCATGTTCTTAAAATGCC...GGGCTGCCCATTCACGCAGAGCTCTCTGAGCGGGAGGTGGAAGAAAGGATGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
3UTR-3UTR TCA 90 bp TTAGGGGGCCAGGAAAAGGGTGGAGGGTACATGCTTTCATCATTCCAAAGCCTCGAGACGATGGAGAGGTaGATGAAGCACAGCACGAGC +
Preference number: 2 (lower is better)
Translates to: LGGQEKGGGYMLSSFQSLETMER*MKHSTS
Trigger: GCTCGTGCTGTGCTTCATTCACCTCTCCATCGTCTC...GAGGCTTTGGAATGATGAAAGCATGTACCCTCCACCCTTTTCCTGGCCCCCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000639617.1
3UTR-3UTR TCA 90 bp TGCCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAACTCTCTAGAAGAACATaGAGTCCCAGCTCTGTGGCA +
Preference number: 2 (lower is better)
Translates to: CPLALVLTLGPLTCQSLQLSRRT*SPSSVA
Trigger: TGCCACAGAGCTGGGACTTCATGTTCTTCTAGAGAG...TTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
3UTR-3UTR GCA 90 bp CTAATGAGCCACTTATATATAGAATGCTTGTGCCCGTTGGCTCTCGTTCTTACCCCGCTCAGAGAGCTCTaGGTGAATGGGCAGCCCGGC +
Preference number: 2 (lower is better)
Translates to: LMSHLYIECLCPLALVLTPLREL*VNGQPG
Trigger: GCCGGGCTGCCCATTCACGCAGAGCTCTCTGAGCGG...GGTAAGAACGAGAGCCAACGGGCACAAGCATTCTATATATAAGTGGCTCATTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
3UTR CAA 90 bp CCTCCTGGACTGCAAGCTGCATCTCAACAGAACTTGGGATGCTGCTaGGACCCTAGAAAAGGCAGACTGTATGAGAGGCATAGCGTGCTT +
Preference number: 2 (lower is better)
Translates to: PPGLQAASQQNLGCC*DPRKGRLYERHSVL
Trigger: AAGCACGCTATGCCTCTCATACAGTCTGCCTTTTCTAGGGTCCAAGCAGCATCCCAAGTTCTGTTGAGATGCAGCTTGCAGTCCAGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639617.1
3UTR-3UTR TCA 90 bp TGCCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAAAACGTACAGTCCAGTaGCCTTGGAATGCAGGATCT +
Preference number: 2 (lower is better)
Translates to: CPLALVLTLGPLTCQSLQKRTVQ*PWNAGS
Trigger: AGATCCTGCATTCCAAGGTCACTGGACTGTACGTTT...TTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
3UTR-3UTR GCA 90 bp CACACTGCAGACTCACACTATCTTCTCACTGCTGGGAGTGGACCATGCTTATGTGACCCACTACCCACCTaGAACAAGTCTTCCAGAGGC +
Preference number: 2 (lower is better)
Translates to: HTADSHYLLTAGSGPCLCDPLPT*NKSSRG
Trigger: GCCTCTGGAAGACTTGTTGCAGGTGGGTAGTGGGTC...ACATAAGCATGGTCCACTCCCAGCAGTGAGAAGATAGTGTGAGTCTGCAGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639617.1
3UTR-3UTR CCA 90 bp CAAAAATTCCAGGAACTGCTGAGTCAGGAGAGCGTTTTTCAAGACATCTGGCCCGCTTCAGGCCAAGACTaGAATGCCAGAGCAGGGGAG +
Preference number: 2 (lower is better)
Translates to: QKFQELLSQESVFQDIWPASGQD*NARAGE
Trigger: CTCCCCTGCTCTGGCATTCCAGTCTTGGCCTGAAGC...GGGCCAGATGTCTTGAAAAACGCTCTCCTGACTCAGCAGTTCCTGGAATTTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000639617.1
3UTR-3UTR TCA 90 bp CCTTGGAATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGGCATTTTAAGAACATaGACATCACTGTCTGCCACA +
Preference number: 2 (lower is better)
Translates to: PWNAGSARGLHYVGINTLGILRT*TSLSAT
Trigger: TGTGGCAGACAGTGATGTTCATGTTCTTAAAATGCC...CAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCATTCCAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
3UTR-3UTR TCA 90 bp CAAAAATTCCAGGAACTGCTGAGTCAGGAGAGCGTTTTTCAAGACATCTGGCCCGAGACGATGGAGAGGTaGATGAAGCACAGCACGAGC +
Preference number: 2 (lower is better)
Translates to: QKFQELLSQESVFQDIWPETMER*MKHSTS
Trigger: GCTCGTGCTGTGCTTCATTCACCTCTCCATCGTCTC...GGGCCAGATGTCTTGAAAAACGCTCTCCTGACTCAGCAGTTCCTGGAATTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000639617.1
3UTR-3UTR GCA 90 bp AACACCCTGGCTGGGGTGGGGCCCTGTACTGTAGCCTTGGCCTTTCATTCAGACCTCCAAACACTTTCATaGAAAACACACAACGGAGAA +
Preference number: 2 (lower is better)
Translates to: NTLAGVGPCTVALAFHSDLQTLS*KTHNGE
Trigger: TTCTCCGTTGTGTGTTTTGCATGAAAGTGTTTGGAG...GTCTGAATGAAAGGCCAAGGCTACAGTACAGGGCCCCACCCCAGCCAGGGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
3UTR-3UTR TCA 90 bp GTCCATCAAGTCCAATCGCTTTTCTCCCCACACTGCAGACTCACACTATCTTCTATCCTACCTGGAATCTaGCCCACTACCCACCTGCAA +
Preference number: 2 (lower is better)
Translates to: VHQVQSLFSPHCRLTLSSILPGI*PTTHLQ
Trigger: TTGCAGGTGGGTAGTGGGTCAGATTCCAGGTAGGAT...AGAAGATAGTGTGAGTCTGCAGTGTGGGGAGAAAAGCGATTGGACTTGATGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639617.1
3UTR-3UTR GCA 90 bp GCCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGCTCCAAACACTTTCATaGAAAACACACAACGGAGAA +
Preference number: 2 (lower is better)
Translates to: ARWLSFLPWALLPAKAYKLQTLS*KTHNGE
Trigger: TTCTCCGTTGTGTGTTTTGCATGAAAGTGTTTGGAG...CTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
3UTR-3UTR GCA 90 bp GGCCTCCAAAGCTGCTCCACTTCCAAAAAGTCATGGAGGCTTATGTCCAGCTCAAGGGTGGAGGGTACATaGTTTCATCATTCCAAAGCC +
Preference number: 2 (lower is better)
Translates to: GLQSCSTSKKSWRLMSSSRVEGT*FHHSKA
Trigger: GGCTTTGGAATGATGAAAGCATGTACCCTCCACCCT...TGAGCTGGACATAAGCCTCCATGACTTTTTGGAAGTGGAGCAGCTTTGGAGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639617.1
3UTR-3UTR GCA 90 bp CTTCCCACAACCATAAAAACGTACAGTCCAGTGACCTTGGAATGCAGGATCTGCATGAACATCACTGTCTaGCACAGCTGTAGCCATGCC +
Preference number: 2 (lower is better)
Translates to: LPTTIKTYSPVTLECRICMNITV*HSCSHA
Trigger: GGCATGGCTACAGCTGTGGCAGACAGTGATGTTCAT...GCAGATCCTGCATTCCAAGGTCACTGGACTGTACGTTTTTATGGTTGTGGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
3UTR-3UTR GCA 90 bp CTAATGAGCCACTTATATATAGAATGCTTGTGCCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTaGCAAAGCCTACAAGGCCCT +
Preference number: 2 (lower is better)
Translates to: LMSHLYIECLCPLALVLTLGPLT*QSLQGP
Trigger: AGGGCCTTGTAGGCTTTGGCAGGTAAGAGGGCCCAA...GGTAAGAACGAGAGCCAACGGGCACAAGCATTCTATATATAAGTGGCTCATTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
3UTR-3UTR GCA 90 bp TATCTTCTCACTGCTGGGAGTGGACCATGCTTATGTCACCAGTATTGGCAGACTATCTTTCATTCCTTCTaGCTTCGGAAGGCAGGAGGC +
Preference number: 2 (lower is better)
Translates to: YLLTAGSGPCLCHQYWQTIFHSF*LRKAGG
Trigger: GCCTCCTGCCTTCCGAAGGCAGAAGGAATGAAAGAT...AGTCTGCCAATACTGGTGACATAAGCATGGTCCACTCCCAGCAGTGAGAAGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639617.1
3UTR-3UTR GCA 90 bp CAAAAATTCCAGGAACTGCTGAGTCAGGAGAGCGTTTTTCAAGACATCTGGCCCGGTGGCCTCCAAAGCTaGTCCACTTCCAAAAAGTCA +
Preference number: 2 (lower is better)
Translates to: QKFQELLSQESVFQDIWPGGLQS*STSKKS
Trigger: TGACTTTTTGGAAGTGGAGCAGCTTTGGAGGCCACC...GGGCCAGATGTCTTGAAAAACGCTCTCCTGACTCAGCAGTTCCTGGAATTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000639617.1
3UTR CAA 90 bp AATAAACACCTAATGAGCCACTTATATATAGAATGCTTGTGCCCGTaGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTA +
Preference number: 2 (lower is better)
Translates to: NKHLMSHLYIECLCP*ALVLTLGPLTCQSL
Trigger: TAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGGCACAAGCATTCTATATATAAGTGGCTCATTAGGTGTTTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
3UTR-3UTR GCA 90 bp GTCCATCAAGTCCAATCGCTTTTCTCCCCACACTGCAGACTCACACTATCTTCTTATATAGAATGCTTGTaGCCGTTGGCTCTCGTTCTT +
Preference number: 2 (lower is better)
Translates to: VHQVQSLFSPHCRLTLSSYIECL*PLALVL
Trigger: AAGAACGAGAGCCAACGGGCACAAGCATTCTATATA...AGAAGATAGTGTGAGTCTGCAGTGTGGGGAGAAAAGCGATTGGACTTGATGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639617.1
3UTR-3UTR GCA 90 bp TCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGGCCCTTAATTCTAAAGCTCCAAACACTTTCATaGAAAACACACAACGGAGAA +
Preference number: 2 (lower is better)
Translates to: SYLGPSYLPKPTRPLILKLQTLS*KTHNGE
Trigger: TTCTCCGTTGTGTGTTTTGCATGAAAGTGTTTGGAG...CTTTAGAATTAAGGGCCTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
3UTR CAA 90 bp ACTCCCCCATCCTATTTCTCCGTCAGTGTAAGCAATATAAGGATTTaGAGTATCAAGTTCCTGAGGCCTGGACACAGAAACATTCTCATT +
Preference number: 2 (lower is better)
Translates to: TPPSYFSVSVSNIRI*SIKFLRPGHRNILI
Trigger: AATGAGAATGTTTCTGTGTCCAGGCCTCAGGAACTTGATACTCAAAATCCTTATATTGCTTACACTGACGGAGAAATAGGATGGGGGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639617.1
3UTR-3UTR CAA 90 bp CCAGCACACTGCCCGCACATCCTAGGAGGGGTTGGGAAAGGGCCCAGGCCCCATGCCTTGAGCCCACACTaGGGCACAGAGGCTCTGCCC +
Preference number: 3 (lower is better)
Translates to: PAHCPHILGGVGKGPRPHALSPH*GTEALP
Trigger: GGGCAGAGCCTCTGTGCCCAAGTGTGGGCTCAAGGC...ATGGGGCCTGGGCCCTTTCCCAACCCCTCCTAGGATGTGCGGGCAGTGTGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
3UTR TCA 72 bp AGAGAGCTCTGCGTGAATGGGCAGCCCGGCTGGCTGTaGGGCGCCAGCACACTGCCCGCACATCCTAGGAGG +
Preference number: 3 (lower is better)
Translates to: RELCVNGQPGWL*GASTLPAHPRR
Trigger: CCTCCTAGGATGTGCGGGCAGTGTGCTGGCGCCTCACAGCCAGCCGGGCTGCCCATTCACGCAGAGCTCTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
3UTR TCA 72 bp GGAAGGCCATCGAGGGCTCTGTCACAGCACAGGGTGTaGAAGTCCGGCCGCCCCTCGCCAGCTTCCGAGACA +
Preference number: 3 (lower is better)
Translates to: GRPSRALSQHRV*KSGRPSPASET
Trigger: TGTCTCGGAAGCTGGCGAGGGGCGGCCGGACTTTCACACCCTGTGCTGTGACAGAGCCCTCGATGGCCTTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639617.1
3UTR-3UTR CAA 90 bp CCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGCTGGGGTGGGGCCCTGTAGCTCTGCTGGGAGCCTaGAGCCCACACTTGGGCACA +
Preference number: 3 (lower is better)
Translates to: PEASTTWALTPWLGWGPVALLGA*SPHLGT
Trigger: TGTGCCCAAGTGTGGGCTCAAGGCTCCCAGCAGAGC...TACAGGGCCCCACCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
3UTR TCA 72 bp ATCCTTTCTTCCACCTCCCGCTCAGAGAGCTCTGCGTaGATGGGCAGCCCGGCTGGCTGTGAGGCGCCAGCA +
Preference number: 3 (lower is better)
Translates to: ILSSTSRSESSA*MGSPAGCEAPA
Trigger: TGCTGGCGCCTCACAGCCAGCCGGGCTGCCCATTCACGCAGAGCTCTCTGAGCGGGAGGTGGAAGAAAGGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
3UTR TCA 72 bp GAGGGCAGCCCTTCCGACAGCGACGACAAATGCCAATaGGCCCCTCGTGGGTGGCCTAGGATGGTGCTAGCC +
Preference number: 3 (lower is better)
Translates to: EGSPSDSDDKCQ*APRGWPRMVLA
Trigger: GGCTAGCACCATCCTAGGCCACCCACGAGGGGCTCATTGGCATTTGTCGTCGCTGTCGGAAGGGCTGCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639617.1
3UTR GCA 72 bp GCGTCCCTCTCCGGTGTGATGAAAAGTGACTGGGGCTaGACAGCCACTCCTGAGGACCCGCCTGGAACAAGT +
Preference number: 3 (lower is better)
Translates to: ASLSGVMKSDWG*TATPEDPPGTS
Trigger: ACTTGTTCCAGGCGGGTCCTCAGGAGTGGCTGTGCAGCCCCAGTCACTTTTCATCACACCGGAGAGGGACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639617.1
3UTR CCA 72 bp CTTGGAATGCAGGATCTGCCAGAGGCCTCCACTACGTaGGCATTAACACCCTGGCTGGGGTGGGGCCCTGTA +
Preference number: 3 (lower is better)
Translates to: LGMQDLPEASTT*ALTPWLGWGPV
Trigger: TACAGGGCCCCACCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCATTCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
3UTR-3UTR CAA 90 bp GCCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGGCTCTGCTGGGAGCCTaGAGCCCACACTTGGGCACA +
Preference number: 3 (lower is better)
Translates to: ARWLSFLPWALLPAKAYKALLGA*SPHLGT
Trigger: TGTGCCCAAGTGTGGGCTCAAGGCTCCCAGCAGAGC...CTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
3UTR-3UTR CAA 90 bp TGCCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAACCCTGGCAGGATGGGTaGGGGTCACTTGACCCCTGC +
Preference number: 3 (lower is better)
Translates to: CPLALVLTLGPLTCQSLQPWQDG*GSLDPC
Trigger: GCAGGGGTCAAGTGACCCCAACCCATCCTGCCAGGG...TTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639617.1
3UTR-3UTR CAA 90 bp CTCTTGTGGCCCTCTCTAGAAGAACATGAAGTCCCAGCTCTGTGGCAACCAGAGGCCTTGAGCCCACACTaGGGCACAGAGGCTCTGCCC +
Preference number: 3 (lower is better)
Translates to: LLWPSLEEHEVPALWQPEALSPH*GTEALP
Trigger: GGGCAGAGCCTCTGTGCCCAAGTGTGGGCTCAAGGC...CTCTGGTTGCCACAGAGCTGGGACTTCATGTTCTTCTAGAGAGGGCCACAAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
3UTR-3UTR CAA 90 bp GGCTCAGGTGATCCTCACAACTCAGCGCCCCCAAGTAGCTGGGACTGCAGGCATTTCACGTGTGAACAGTaGTTCTGTCCCACGTCCCCC +
Preference number: 3 (lower is better)
Translates to: GSGDPHNSAPPSSWDCRHFTCEQ*FCPTSP
Trigger: GGGGGACGTGGGACAGAACAACTGTTCACACGTGAA...ATGCCTGCAGTCCCAGCTACTTGGGGGCGCTGAGTTGTGAGGATCACCTGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639617.1
3UTR TCA 72 bp CCCTGTGGCCCTCTTGTGGCCCTCTCTAGAAGAACATaGAGTCCCAGCTCTGTGGCAACCAGAGCCATCCTT +
Preference number: 3 (lower is better)
Translates to: PCGPLVALSRRT*SPSSVATRAIL
Trigger: AAGGATGGCTCTGGTTGCCACAGAGCTGGGACTTCATGTTCTTCTAGAGAGGGCCACAAGAGGGCCACAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
3UTR-3UTR CAA 90 bp CTTCCCACAACCATAAAAACGTACAGTCCAGTGACCTTGGAATGCAGGATCTGCGCCTTGAGCCCACACTaGGGCACAGAGGCTCTGCCC +
Preference number: 3 (lower is better)
Translates to: LPTTIKTYSPVTLECRICALSPH*GTEALP
Trigger: GGGCAGAGCCTCTGTGCCCAAGTGTGGGCTCAAGGC...GCAGATCCTGCATTCCAAGGTCACTGGACTGTACGTTTTTATGGTTGTGGGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
3UTR TCA 72 bp GGTGCCAGCTTCTCCCAGTTCATCCTACCTGGAATCTaGCCCACTACCCACCTGCAACAAGTCTTCCAGAGG +
Preference number: 3 (lower is better)
Translates to: GASFSQFILPGI*PTTHLQQVFQR
Trigger: CCTCTGGAAGACTTGTTGCAGGTGGGTAGTGGGTCAGATTCCAGGTAGGATGAACTGGGAGAAGCTGGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639617.1
3UTR CCA 72 bp GACCTGGGGTGCCAGCTTCTCCCAGTTCATCCTACCTaGAATCTGACCCACTACCCACCTGCAACAAGTCTT +
Preference number: 3 (lower is better)
Translates to: DLGCQLLPVHPT*NLTHYPPATSL
Trigger: AAGACTTGTTGCAGGTGGGTAGTGGGTCAGATTCCAGGTAGGATGAACTGGGAGAAGCTGGCACCCCAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639617.1
3UTR GCA 72 bp ACCCTAGAAAAGGCAGACTGTATGAGAGGCATAGCGTaGTTCAGGCCAAGACTGGAATGCCAGAGCAGGGGA +
Preference number: 3 (lower is better)
Translates to: TLEKADCMRGIA*FRPRLECQSRG
Trigger: TCCCCTGCTCTGGCATTCCAGTCTTGGCCTGAAGCACGCTATGCCTCTCATACAGTCTGCCTTTTCTAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639617.1
3UTR GCA 72 bp GGACTGCAAGCTGCATCTCAACAGAACTTGGGATGCTaGTTGGACCCTAGAAAAGGCAGACTGTATGAGAGG +
Preference number: 3 (lower is better)
Translates to: GLQAASQQNLGC*LDPRKGRLYER
Trigger: CCTCTCATACAGTCTGCCTTTTCTAGGGTCCAAGCAGCATCCCAAGTTCTGTTGAGATGCAGCTTGCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639617.1
3UTR GCA 72 bp CCTGGACTGCAAGCTGCATCTCAACAGAACTTGGGATaGTGCTTGGACCCTAGAAAAGGCAGACTGTATGAG +
Preference number: 3 (lower is better)
Translates to: PGLQAASQQNLG*CLDPRKGRLYE
Trigger: CTCATACAGTCTGCCTTTTCTAGGGTCCAAGCAGCATCCCAAGTTCTGTTGAGATGCAGCTTGCAGTCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639617.1
3UTR CCA 72 bp CTCTCCCTTCTCGGTATATCTGCAACTAAACAGGACTaGGGTTGTGCGTCCCTCTCCGGTGTGATGAAAAGT +
Preference number: 3 (lower is better)
Translates to: LSLLGISATKQD*GCASLSGVMKS
Trigger: ACTTTTCATCACACCGGAGAGGGACGCACAACCCCAGTCCTGTTTAGTTGCAGATATACCGAGAAGGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639617.1
3UTR CCA 72 bp CACTGCAGACTCACACTATCTTCTCACTGCTGGGAGTaGACCATGCTTATGTCACCAGTATTGGCAGACTCA +
Preference number: 3 (lower is better)
Translates to: HCRLTLSSHCWE*TMLMSPVLADS
Trigger: TGAGTCTGCCAATACTGGTGACATAAGCATGGTCCACTCCCAGCAGTGAGAAGATAGTGTGAGTCTGCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639617.1
3UTR CCA 72 bp TGCAAGCTGCATCTCAACAGAACTTGGGATGCTGCTTaGACCCTAGAAAAGGCAGACTGTATGAGAGGCATA +
Preference number: 3 (lower is better)
Translates to: CKLHLNRTWDAA*TLEKADCMRGI
Trigger: TATGCCTCTCATACAGTCTGCCTTTTCTAGGGTCCAAGCAGCATCCCAAGTTCTGTTGAGATGCAGCTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639617.1
3UTR CCA 72 bp GGACCATGCTTATGTCACCAGTATTGGCAGACTCATTaGAATCGTTACTCTAAAGGAGGTGAGGTGATGGTG +
Preference number: 3 (lower is better)
Translates to: GPCLCHQYWQTH*NRYSKGGEVMV
Trigger: CACCATCACCTCACCTCCTTTAGAGTAACGATTCCAATGAGTCTGCCAATACTGGTGACATAAGCATGGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639617.1
3UTR CCA 72 bp ACTGCTGGGAGTGGACCATGCTTATGTCACCAGTATTaGCAGACTCATTGGAATCGTTACTCTAAAGGAGGT +
Preference number: 3 (lower is better)
Translates to: TAGSGPCLCHQY*QTHWNRYSKGG
Trigger: ACCTCCTTTAGAGTAACGATTCCAATGAGTCTGCCAATACTGGTGACATAAGCATGGTCCACTCCCAGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639617.1
3UTR GCA 72 bp AAACACCTAATGAGCCACTTATATATAGAATGCTTGTaGCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTT +
Preference number: 3 (lower is better)
Translates to: KHLMSHLYIECL*PLALVLTLGPL
Trigger: AAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGGCACAAGCATTCTATATATAAGTGGCTCATTAGGTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
3UTR CCA 72 bp ATTGAACTTCTTGCCCCTCTAAGTACTGTCATGCCATaGGTGGAGAAATTTAGGAAAGTTCTGGAAATCCCT +
Preference number: 3 (lower is better)
Translates to: IELLAPLSTVMP*VEKFRKVLEIP
Trigger: AGGGATTTCCAGAACTTTCCTAAATTTCTCCACCCATGGCATGACAGTACTTAGAGGGGCAAGAAGTTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR GCA 90 bp CCAGCACACTGCCCGCACATCCTAGGAGGGGTTGGGAAAGGGCCCAGGCCCCATCCAGGCACGCTAGCCTaGGCTCGGGGCGCGGGCCAT +
Preference number: 4 (lower is better)
Translates to: PAHCPHILGGVGKGPRPHPGTLA*ARGAGH
Trigger: ATGGCCCGCGCCCCGAGCGCAGGCTAGCGTGCCTGG...ATGGGGCCTGGGCCCTTTCCCAACCCCTCCTAGGATGTGCGGGCAGTGTGCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340957.9
ENST00000418281.5
CDS-3UTR CCA 90 bp GCGCCAGCACACTGCCCGCACATCCTAGGAGGGGTTGGGAAAGGGCCCAGGCCCCAGCACGAGCCCAGCTaGGCAGGGGCCCTTGAGGGA +
Preference number: 4 (lower is better)
Translates to: APAHCPHILGGVGKGPRPQHEPS*AGALEG
Trigger: TCCCTCAAGGGCCCCTGCCCAGCTGGGCTCGTGCTG...GGGCCTGGGCCCTTTCCCAACCCCTCCTAGGATGTGCGGGCAGTGTGCTGGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR TCA 90 bp CCCAGGAGCCCTCTAGGCTGTGGAGCTCTGCTGGGAGCCTTGAGCCCACACTTGCAGCCCGGCTGGCTGTaGGGCGCCAGCACACTGCCC +
Preference number: 4 (lower is better)
Translates to: PRSPLGCGALLGALSPHLQPGWL*GASTLP
Trigger: GGGCAGTGTGCTGGCGCCTCACAGCCAGCCGGGCTG...CAAGTGTGGGCTCAAGGCTCCCAGCAGAGCTCCACAGCCTAGAGGGCTCCTGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
CDS-3UTR GCA 90 bp GCGCCAGCACACTGCCCGCACATCCTAGGAGGGGTTGGGAAAGGGCCCAGGCCCGTGGCTGGCAGTCCTTaGAGGGGGCTGGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: APAHCPHILGGVGKGPRPVAGSP*RGLAPP
Trigger: AGGAGGAGCCAGCCCCCTGCAAGGACTGCCAGCCAC...GGGCCTGGGCCCTTTCCCAACCCCTCCTAGGATGTGCGGGCAGTGTGCTGGCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000639617.1
CDS-3UTR GCA 90 bp CCTCCCGCTCAGAGAGCTCTGCGTGAATGGGCAGCCCGGCTGGCTGTGAGGCGCCCGCTCAGAGAGCTCTaGGTGAATGGGCAGCCCGGC +
Preference number: 4 (lower is better)
Translates to: PPAQRALREWAARLAVRRPLREL*VNGQPG
Trigger: GCCGGGCTGCCCATTCACGCAGAGCTCTCTGAGCGG...GCGCCTCACAGCCAGCCGGGCTGCCCATTCACGCAGAGCTCTCTGAGCGGGAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp TGTGAGGCGCCAGCACACTGCCCGCACATCCTAGGAGGGGTTGGGAAAGGGCCCCCGGTGAACAGGTCCTaGAGGTGCGGCCCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: CEAPAHCPHILGGVGKGPPVNRS*RCGPRG
Trigger: GCCCCTGGGGCCGCACCTCCAGGACCTGTTCACCGG...GGGCCCTTTCCCAACCCCTCCTAGGATGTGCGGGCAGTGTGCTGGCGCCTCACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp TTCTTCCACCTCCCGCTCAGAGAGCTCTGCGTGAATGGGCAGCCCGGCTGGCTGTCATCGCCCAGCAGCTaGGAGGCCAGCCGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: FFHLPLRELCVNGQPGWLSSPSS*EASRAG
Trigger: CCCGGCCCGGCTGGCCTCCCAGCTGCTGGGCGATGA...CAGCCAGCCGGGCTGCCCATTCACGCAGAGCTCTCTGAGCGGGAGGTGGAAGAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
3UTR CAA 72 bp GGCTGTGGAGCTCTGCTGGGAGCCTTGAGCCCACACTaGGGCACAGAGGCTCTGCCCCTGGCAGCAGCCGGG +
Preference number: 4 (lower is better)
Translates to: GCGALLGALSPH*GTEALPLAAAG
Trigger: CCCGGCTGCTGCCAGGGGCAGAGCCTCTGTGCCCAAGTGTGGGCTCAAGGCTCCCAGCAGAGCTCCACAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
CDS-3UTR TCA 90 bp GCGCCAGCACACTGCCCGCACATCCTAGGAGGGGTTGGGAAAGGGCCCAGGCCCGGGCGAGTTGTAGAGTaGGTCCTGGGCCTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: APAHCPHILGGVGKGPRPGRVVE*VLGLQW
Trigger: CCACTGGAGGCCCAGGACTCACTCTACAACTCGCCC...GGGCCTGGGCCCTTTCCCAACCCCTCCTAGGATGTGCGGGCAGTGTGCTGGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR GCA 90 bp AGCACGAGCCCAGCTGGGCAGGGGCCCTTGAGGGACGGCTCAACCCATAGGCTCGAGGCGCCAGCACACTaGCCGCACATCCTAGGAGGG +
Preference number: 4 (lower is better)
Translates to: STSPAGQGPLRDGSTHRLEAPAH*PHILGG
Trigger: CCCTCCTAGGATGTGCGGGCAGTGTGCTGGCGCCTC...GAGCCTATGGGTTGAGCCGTCCCTCAAGGGCCCCTGCCCAGCTGGGCTCGTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
CDS-3UTR CCA 90 bp AGCACGAGCCCAGCTGGGCAGGGGCCCTTGAGGGACGGCTCAACCCATAGGCTCGGGCTCGCCGGGACTTaGGCAGCATCGCGACTGTGT +
Preference number: 4 (lower is better)
Translates to: STSPAGQGPLRDGSTHRLGLAGT*AASRLC
Trigger: ACACAGTCGCGATGCTGCCCAAGTCCCGGCGAGCCC...GAGCCTATGGGTTGAGCCGTCCCTCAAGGGCCCCTGCCCAGCTGGGCTCGTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
CDS-3UTR CCA 90 bp GGCCTCCACTACGTGGGCATTAACACCCTGGCTGGGGTGGGGCCCTGTACTGTATCATCGCCCAGCAGCTaGGAGGCCAGCCGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: GLHYVGINTLAGVGPCTVSSPSS*EASRAG
Trigger: CCCGGCCCGGCTGGCCTCCCAGCTGCTGGGCGATGA...TACAGTACAGGGCCCCACCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp TTCTTCCACCTCCCGCTCAGAGAGCTCTGCGTGAATGGGCAGCCCGGCTGGCTGGTCCTTGCAGGGGGCTaGCTCCTCCTCCGCGGGGGA +
Preference number: 4 (lower is better)
Translates to: FFHLPLRELCVNGQPGWLVLAGG*LLLRGG
Trigger: TCCCCCGCGGAGGAGGAGCCAGCCCCCTGCAAGGAC...CAGCCAGCCGGGCTGCCCATTCACGCAGAGCTCTCTGAGCGGGAGGTGGAAGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000639617.1
CDS-3UTR CCA 90 bp CCTCCCGCTCAGAGAGCTCTGCGTGAATGGGCAGCCCGGCTGGCTGTGAGGCGCCATCCTAGGAGGGGTTaGGAAAGGGCCCAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: PPAQRALREWAARLAVRRHPRRG*ERAQAP
Trigger: TGGGGCCTGGGCCCTTTCCCAACCCCTCCTAGGATG...GCGCCTCACAGCCAGCCGGGCTGCCCATTCACGCAGAGCTCTCTGAGCGGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp TCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGCTGGGGTGGGGCCCTCCCGGCCACCCCTGTaGCCCTCTTGTGGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: SARGLHYVGINTLAGVGPSRPPL*PSCGPL
Trigger: GAGAGGGCCACAAGAGGGCCACAGGGGTGGCCGGGA...GGGCCCCACCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp CCAGCACACTGCCCGCACATCCTAGGAGGGGTTGGGAAAGGGCCCAGGCCCCATGGAGGCAGCTACAGCTaGAGGCTGCACCCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: PAHCPHILGGVGKGPRPHGGSYS*RLHPSP
Trigger: GGGGCTGGGGTGCAGCCTCCAGCTGTAGCTGCCTCC...ATGGGGCCTGGGCCCTTTCCCAACCCCTCCTAGGATGTGCGGGCAGTGTGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR TCA 90 bp CCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGCTGGGGTGGGGCCCTGTAGTCCCCAGAAATGCCTaGCCCGCCGGGCTCCGAGAG +
Preference number: 4 (lower is better)
Translates to: PEASTTWALTPWLGWGPVVPRNA*PAGLRE
Trigger: CTCTCGGAGCCCGGCGGGTCAGGCATTTCTGGGGAC...TACAGGGCCCCACCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340957.9
ENST00000418281.5
CDS-3UTR TCA 90 bp CCTTTCTTCCACCTCCCGCTCAGAGAGCTCTGCGTGAATGGGCAGCCCGGCTGGGTCCCCAGAAATGCCTaGCCCGCCGGGCTCCGAGAG +
Preference number: 4 (lower is better)
Translates to: PFFHLPLRELCVNGQPGWVPRNA*PAGLRE
Trigger: CTCTCGGAGCCCGGCGGGTCAGGCATTTCTGGGGAC...CCAGCCGGGCTGCCCATTCACGCAGAGCTCTCTGAGCGGGAGGTGGAAGAAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340957.9
ENST00000418281.5
CDS-3UTR GCA 90 bp TGTGAGGCGCCAGCACACTGCCCGCACATCCTAGGAGGGGTTGGGAAAGGGCCCGTGGCTGGCAGTCCTTaGAGGGGGCTGGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: CEAPAHCPHILGGVGKGPVAGSP*RGLAPP
Trigger: AGGAGGAGCCAGCCCCCTGCAAGGACTGCCAGCCAC...GGGCCCTTTCCCAACCCCTCCTAGGATGTGCGGGCAGTGTGCTGGCGCCTCACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000639617.1
CDS-3UTR GCA 90 bp TCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGCTGGGGTGGGGCCCGCCAGGTCAGAGGCTTaGCGCTGCCGTTCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: SARGLHYVGINTLAGVGPARSEA*RCRSQL
Trigger: CAGCTGGGAACGGCAGCGGCAAGCCTCTGACCTGGC...GGGCCCCACCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
CDS-3UTR GCA 90 bp CCAGCACACTGCCCGCACATCCTAGGAGGGGTTGGGAAAGGGCCCAGGCCCCATGCAGCAGCCGGGGGATaGATGCCACTGCCAGGCATG +
Preference number: 4 (lower is better)
Translates to: PAHCPHILGGVGKGPRPHAAAGG*MPLPGM
Trigger: CATGCCTGGCAGTGGCATGCATCCCCCGGCTGCTGC...ATGGGGCCTGGGCCCTTTCCCAACCCCTCCTAGGATGTGCGGGCAGTGTGCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
CDS-3UTR GCA 90 bp TGTGAGGCGCCAGCACACTGCCCGCACATCCTAGGAGGGGTTGGGAAAGGGCCCCCGCTCAGAGAGCTCTaGGTGAATGGGCAGCCCGGC +
Preference number: 4 (lower is better)
Translates to: CEAPAHCPHILGGVGKGPPLREL*VNGQPG
Trigger: GCCGGGCTGCCCATTCACGCAGAGCTCTCTGAGCGG...GGGCCCTTTCCCAACCCCTCCTAGGATGTGCGGGCAGTGTGCTGGCGCCTCACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp CCTCCCGCTCAGAGAGCTCTGCGTGAATGGGCAGCCCGGCTGGCTGTGAGGCGCAGCGCAGCGATCTCCTaGATAGTTAGGGCTCGCCGG +
Preference number: 4 (lower is better)
Translates to: PPAQRALREWAARLAVRRSAAIS*IVRARR
Trigger: CCGGCGAGCCCTAACTATCCAGGAGATCGCTGCGCT...GCGCCTCACAGCCAGCCGGGCTGCCCATTCACGCAGAGCTCTCTGAGCGGGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000639617.1
CDS-3UTR CCA 90 bp AGCACGAGCCCAGCTGGGCAGGGGCCCTTGAGGGACGGCTCAACCCATAGGCTCCATGCAGGGAGGACCTaGCCAGCGCAGCGATCTCCT +
Preference number: 4 (lower is better)
Translates to: STSPAGQGPLRDGSTHRLHAGRT*PAQRSP
Trigger: AGGAGATCGCTGCGCTGGCCAGGTCCTCCCTGCATG...GAGCCTATGGGTTGAGCCGTCCCTCAAGGGCCCCTGCCCAGCTGGGCTCGTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
CDS-3UTR CCA 90 bp CCATCCTTTCTTCCACCTCCCGCTCAGAGAGCTCTGCGTGAATGGGCAGCCCGGCCGGTGAACAGGTCCTaGAGGTGCGGCCCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: PSFLPPPAQRALREWAARPVNRS*RCGPRG
Trigger: GCCCCTGGGGCCGCACCTCCAGGACCTGTTCACCGG...CCGGGCTGCCCATTCACGCAGAGCTCTCTGAGCGGGAGGTGGAAGAAAGGATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp GTGGGCATTAACACCCTGGCTGGGGTGGGGCCCTGTACTGTAGCCTTGGCCTTTTCATCGCCCAGCAGCTaGGAGGCCAGCCGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: VGINTLAGVGPCTVALAFSSPSS*EASRAG
Trigger: CCCGGCCCGGCTGGCCTCCCAGCTGCTGGGCGATGA...AAAGGCCAAGGCTACAGTACAGGGCCCCACCCCAGCCAGGGTGTTAATGCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp GCGCCAGCACACTGCCCGCACATCCTAGGAGGGGTTGGGAAAGGGCCCAGGCCCAGGCACTTTCCCGGCTaGGGGGCAGTTTGGCGAGAA +
Preference number: 4 (lower is better)
Translates to: APAHCPHILGGVGKGPRPRHFPG*GAVWRE
Trigger: TTCTCGCCAAACTGCCCCCCAGCCGGGAAAGTGCCT...GGGCCTGGGCCCTTTCCCAACCCCTCCTAGGATGTGCGGGCAGTGTGCTGGCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp CCATCCTTTCTTCCACCTCCCGCTCAGAGAGCTCTGCGTGAATGGGCAGCCCGGGTCCTTGCAGGGGGCTaGCTCCTCCTCCGCGGGGGA +
Preference number: 4 (lower is better)
Translates to: PSFLPPPAQRALREWAARVLAGG*LLLRGG
Trigger: TCCCCCGCGGAGGAGGAGCCAGCCCCCTGCAAGGAC...CCGGGCTGCCCATTCACGCAGAGCTCTCTGAGCGGGAGGTGGAAGAAAGGATGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000639617.1
CDS-3UTR CCA 90 bp CCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGCTGGGGTGGGGCCCTGTAAGCCGATACAGCCCATaGCCGGGCACCCAGGCACGC +
Preference number: 4 (lower is better)
Translates to: PEASTTWALTPWLGWGPVSRYSP*PGTQAR
Trigger: GCGTGCCTGGGTGCCCGGCCATGGGCTGTATCGGCT...TACAGGGCCCCACCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340957.9
ENST00000418281.5
CDS-3UTR TCA 90 bp GATCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGCTGGGGTGGGGCAGAACCGGTGGCCGGTaGACAGGTCCTGGAGGTGCG +
Preference number: 4 (lower is better)
Translates to: DLPEASTTWALTPWLGWGRTGGR*TGPGGA
Trigger: CGCACCTCCAGGACCTGTTCACCGGCCACCGGTTCT...GCCCCACCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR TCA 90 bp TGTGAGGCGCCAGCACACTGCCCGCACATCCTAGGAGGGGTTGGGAAAGGGCCCTGGGGACACGGTCTGTaGGCAGTCGCTCTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: CEAPAHCPHILGGVGKGPWGHGL*AVALRL
Trigger: GAGCCTGAGAGCGACTGCTCACAGACCGTGTCCCCA...GGGCCCTTTCCCAACCCCTCCTAGGATGTGCGGGCAGTGTGCTGGCGCCTCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR TCA 90 bp CCTTTCTTCCACCTCCCGCTCAGAGAGCTCTGCGTGAATGGGCAGCCCGGCTGGCTGGGCAGGGGCCCTTaGGGGACGGCTCAACCCATA +
Preference number: 4 (lower is better)
Translates to: PFFHLPLRELCVNGQPGWLGRGP*GTAQPI
Trigger: TATGGGTTGAGCCGTCCCTCAAGGGCCCCTGCCCAG...CCAGCCGGGCTGCCCATTCACGCAGAGCTCTCTGAGCGGGAGGTGGAAGAAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR TCA 90 bp TGTGAGGCGCCAGCACACTGCCCGCACATCCTAGGAGGGGTTGGGAAAGGGCCCAGCCGTCTCTATCCCTaGGCCTCGGCCAGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: CEAPAHCPHILGGVGKGPSRLYP*ASASCW
Trigger: CCAACAGCTGGCCGAGGCTCAGGGATAGAGACGGCT...GGGCCCTTTCCCAACCCCTCCTAGGATGTGCGGGCAGTGTGCTGGCGCCTCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340957.9
ENST00000418281.5
ENST00000639617.1
CDS-3UTR GCA 90 bp TGTGAGGCGCCAGCACACTGCCCGCACATCCTAGGAGGGGTTGGGAAAGGGCCCTCAGAGGCTTGCCGCTaGCGTTCCCAGCTGCCCGTT +
Preference number: 4 (lower is better)
Translates to: CEAPAHCPHILGGVGKGPSEACR*RSQLPV
Trigger: AACGGGCAGCTGGGAACGGCAGCGGCAAGCCTCTGA...GGGCCCTTTCCCAACCCCTCCTAGGATGTGCGGGCAGTGTGCTGGCGCCTCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000639617.1
CDS-3UTR GCA 90 bp TTCTTCCACCTCCCGCTCAGAGAGCTCTGCGTGAATGGGCAGCCCGGCTGGCTGGCAGCAGCCGGGGGATaGATGCCACTGCCAGGCATG +
Preference number: 4 (lower is better)
Translates to: FFHLPLRELCVNGQPGWLAAAGG*MPLPGM
Trigger: CATGCCTGGCAGTGGCATGCATCCCCCGGCTGCTGC...CAGCCAGCCGGGCTGCCCATTCACGCAGAGCTCTCTGAGCGGGAGGTGGAAGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
CDS-3UTR GCA 90 bp CCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGCTGGGGTGGGGCCCTGTAGAGGCGCCAGCACACTaGCCGCACATCCTAGGAGGG +
Preference number: 4 (lower is better)
Translates to: PEASTTWALTPWLGWGPVEAPAH*PHILGG
Trigger: CCCTCCTAGGATGTGCGGGCAGTGTGCTGGCGCCTC...TACAGGGCCCCACCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR GCA 90 bp CCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGCTGGGGTGGGGCCCTGTACCGCTCAGAGAGCTCTaGGTGAATGGGCAGCCCGGC +
Preference number: 4 (lower is better)
Translates to: PEASTTWALTPWLGWGPVPLREL*VNGQPG
Trigger: GCCGGGCTGCCCATTCACGCAGAGCTCTCTGAGCGG...TACAGGGCCCCACCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp CCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGCTGGGGTGGGGCCCTGTAGGGCTCGCCGGGACTTaGGCAGCATCGCGACTGTGT +
Preference number: 4 (lower is better)
Translates to: PEASTTWALTPWLGWGPVGLAGT*AASRLC
Trigger: ACACAGTCGCGATGCTGCCCAAGTCCCGGCGAGCCC...TACAGGGCCCCACCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000639617.1
CDS-3UTR CCA 90 bp CCAGCACACTGCCCGCACATCCTAGGAGGGGTTGGGAAAGGGCCCAGGCCCCATCATGCAGGGAGGACCTaGCCAGCGCAGCGATCTCCT +
Preference number: 4 (lower is better)
Translates to: PAHCPHILGGVGKGPRPHHAGRT*PAQRSP
Trigger: AGGAGATCGCTGCGCTGGCCAGGTCCTCCCTGCATG...ATGGGGCCTGGGCCCTTTCCCAACCCCTCCTAGGATGTGCGGGCAGTGTGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000639617.1
CDS-3UTR TCA 90 bp TTCTTCCACCTCCCGCTCAGAGAGCTCTGCGTGAATGGGCAGCCCGGCTGGCTGGGGCGAGTTGTAGAGTaGGTCCTGGGCCTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: FFHLPLRELCVNGQPGWLGRVVE*VLGLQW
Trigger: CCACTGGAGGCCCAGGACTCACTCTACAACTCGCCC...CAGCCAGCCGGGCTGCCCATTCACGCAGAGCTCTCTGAGCGGGAGGTGGAAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR TCA 90 bp CAGGGGCCCTTGAGGGACGGCTCAACCCATAGGCTCCGGGAGGGCAGGAGCCAGAAAGGCAGGACTCTGTaGGGGGCGAGTTGTAGAGTG +
Preference number: 4 (lower is better)
Translates to: QGPLRDGSTHRLREGRSQKGRTL*GASCRV
Trigger: CACTCTACAACTCGCCCCTCACAGAGTCCTGCCTTT...CTGGCTCCTGCCCTCCCGGAGCCTATGGGTTGAGCCGTCCCTCAAGGGCCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
CDS-3UTR TCA 90 bp TTCTTCCACCTCCCGCTCAGAGAGCTCTGCGTGAATGGGCAGCCCGGCTGGCTGCTCTGCTGGGAGCCTTaGGCCCACACTTGGGCACAG +
Preference number: 4 (lower is better)
Translates to: FFHLPLRELCVNGQPGWLLCWEP*AHTWAQ
Trigger: CTGTGCCCAAGTGTGGGCTCAAGGCTCCCAGCAGAG...CAGCCAGCCGGGCTGCCCATTCACGCAGAGCTCTCTGAGCGGGAGGTGGAAGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
CDS-3UTR TCA 90 bp CCTCCCGCTCAGAGAGCTCTGCGTGAATGGGCAGCCCGGCTGGCTGTGAGGCGCGAGACGATGGAGAGGTaGATGAAGCACAGCACGAGC +
Preference number: 4 (lower is better)
Translates to: PPAQRALREWAARLAVRRETMER*MKHSTS
Trigger: GCTCGTGCTGTGCTTCATTCACCTCTCCATCGTCTC...GCGCCTCACAGCCAGCCGGGCTGCCCATTCACGCAGAGCTCTCTGAGCGGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR TCA 90 bp CCTTGGAATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGCAGCCCGGCTGGCTGTaGGGCGCCAGCACACTGCCC +
Preference number: 4 (lower is better)
Translates to: PWNAGSARGLHYVGINTLQPGWL*GASTLP
Trigger: GGGCAGTGTGCTGGCGCCTCACAGCCAGCCGGGCTG...CAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCATTCCAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR TCA 90 bp CGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGGCCCAGCCCGGCTGGCTGTaGGGCGCCAGCACACTGCCC +
Preference number: 4 (lower is better)
Translates to: RWLSFLPWALLPAKAYKAQPGWL*GASTLP
Trigger: GGGCAGTGTGCTGGCGCCTCACAGCCAGCCGGGCTG...GGCCTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR TCA 90 bp CCTTTCTTCCACCTCCCGCTCAGAGAGCTCTGCGTGAATGGGCAGCCCGGCTGGAGCCGTCTCTATCCCTaGGCCTCGGCCAGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: PFFHLPLRELCVNGQPGWSRLYP*ASASCW
Trigger: CCAACAGCTGGCCGAGGCTCAGGGATAGAGACGGCT...CCAGCCGGGCTGCCCATTCACGCAGAGCTCTCTGAGCGGGAGGTGGAAGAAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340957.9
ENST00000418281.5
ENST00000639617.1
CDS-3UTR GCA 90 bp AGCACGAGCCCAGCTGGGCAGGGGCCCTTGAGGGACGGCTCAACCCATAGGCTCCCCCACGTCTGGCCCTaGTTCCTGACCTCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: STSPAGQGPLRDGSTHRLPHVWP*FLTSFL
Trigger: AAGGAAAGAGGTCAGGAAGCAGGGCCAGACGTGGGG...GAGCCTATGGGTTGAGCCGTCCCTCAAGGGCCCCTGCCCAGCTGGGCTCGTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310585.4
CDS-3UTR GCA 90 bp CCTTTCTTCCACCTCCCGCTCAGAGAGCTCTGCGTGAATGGGCAGCCCGGCTGGAGGGGCTGCATACCATaGAGGGAGGACCTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: PFFHLPLRELCVNGQPGWRGCIP*REDLAS
Trigger: GCTGGCCAGGTCCTCCCTGCATGGTATGCAGCCCCT...CCAGCCGGGCTGCCCATTCACGCAGAGCTCTCTGAGCGGGAGGTGGAAGAAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310585.4
CDS-3UTR GCA 90 bp CAGGGGCCCTTGAGGGACGGCTCAACCCATAGGCTCCGGGAGGGCAGGAGCCAGCTCAGCCACTCCTGCTaGAAAGCGAGCCTCTTGTTC +
Preference number: 4 (lower is better)
Translates to: QGPLRDGSTHRLREGRSQLSHSC*KASLLF
Trigger: GAACAAGAGGCTCGCTTTGCAGCAGGAGTGGCTGAG...CTGGCTCCTGCCCTCCCGGAGCCTATGGGTTGAGCCGTCCCTCAAGGGCCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
CDS-3UTR GCA 90 bp GATCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGCTGGGGTGGGGCGCTGCCGTTCCCAGCTaGCCGTTAGTGGTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: DLPEASTTWALTPWLGWGAAVPS*PLVVGR
Trigger: TCTGCCCACCACTAACGGGCAGCTGGGAACGGCAGC...GCCCCACCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000639617.1
CDS-3UTR GCA 90 bp CCAGCACACTGCCCGCACATCCTAGGAGGGGTTGGGAAAGGGCCCAGGCCCCATCAGGAAGATAGGCCCTaGCCTGGCAGGATGGGTTGG +
Preference number: 4 (lower is better)
Translates to: PAHCPHILGGVGKGPRPHQEDRP*PGRMGW
Trigger: CCAACCCATCCTGCCAGGGCAGGGCCTATCTTCCTG...ATGGGGCCTGGGCCCTTTCCCAACCCCTCCTAGGATGTGCGGGCAGTGTGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR CCA 90 bp AACACCCTGGCTGGGGTGGGGCCCTGTACTGTAGCCTTGGCCTTTCATTCAGACGGCTCCACGGAGCCCTaGCGCACAGGCCGGGAGAAC +
Preference number: 4 (lower is better)
Translates to: NTLAGVGPCTVALAFHSDGSTEP*RTGREN
Trigger: GTTCTCCCGGCCTGTGCGCCAGGGCTCCGTGGAGCC...GTCTGAATGAAAGGCCAAGGCTACAGTACAGGGCCCCACCCCAGCCAGGGTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp CCAGCACACTGCCCGCACATCCTAGGAGGGGTTGGGAAAGGGCCCAGGCCCCATAGGCACTTTCCCGGCTaGGGGGCAGTTTGGCGAGAA +
Preference number: 4 (lower is better)
Translates to: PAHCPHILGGVGKGPRPHRHFPG*GAVWRE
Trigger: TTCTCGCCAAACTGCCCCCCAGCCGGGAAAGTGCCT...ATGGGGCCTGGGCCCTTTCCCAACCCCTCCTAGGATGTGCGGGCAGTGTGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp GGCCTCCACTACGTGGGCATTAACACCCTGGCTGGGGTGGGGCCCTGTACTGTAGGTGGGCAGAGTGGCTaGCAGTCCTTGCAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: GLHYVGINTLAGVGPCTVGGQSG*QSLQGA
Trigger: AGCCCCCTGCAAGGACTGCCAGCCACTCTGCCCACC...TACAGTACAGGGCCCCACCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000639617.1
CDS-3UTR CCA 90 bp CAGGGGCCCTTGAGGGACGGCTCAACCCATAGGCTCCGGGAGGGCAGGAGCCAGCTGCCAGGCATGATGTaGGTCACTGTTCCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: QGPLRDGSTHRLREGRSQLPGMM*VTVPLA
Trigger: AGCCAGAGGAACAGTGACCCACATCATGCCTGGCAG...CTGGCTCCTGCCCTCCCGGAGCCTATGGGTTGAGCCGTCCCTCAAGGGCCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
CDS-3UTR CCA 90 bp CTCTCCGGTGTGATGAAAAGTGACTGGGGCTGCACAGCCACTCCTGAGGACCCGCAGCACGAGCCCAGCTaGGCAGGGGCCCTTGAGGGA +
Preference number: 4 (lower is better)
Translates to: LSGVMKSDWGCTATPEDPQHEPS*AGALEG
Trigger: TCCCTCAAGGGCCCCTGCCCAGCTGGGCTCGTGCTG...CGGGTCCTCAGGAGTGGCTGTGCAGCCCCAGTCACTTTTCATCACACCGGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR CCA 90 bp CCTTTCTTCCACCTCCCGCTCAGAGAGCTCTGCGTGAATGGGCAGCCCGGCTGGCATCCTAGGAGGGGTTaGGAAAGGGCCCAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: PFFHLPLRELCVNGQPGWHPRRG*ERAQAP
Trigger: TGGGGCCTGGGCCCTTTCCCAACCCCTCCTAGGATG...CCAGCCGGGCTGCCCATTCACGCAGAGCTCTCTGAGCGGGAGGTGGAAGAAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp GTGGGCATTAACACCCTGGCTGGGGTGGGGCCCTGTACTGTAGCCTTGGCCTTTAGCCGATACAGCCCATaGCCGGGCACCCAGGCACGC +
Preference number: 4 (lower is better)
Translates to: VGINTLAGVGPCTVALAFSRYSP*PGTQAR
Trigger: GCGTGCCTGGGTGCCCGGCCATGGGCTGTATCGGCT...AAAGGCCAAGGCTACAGTACAGGGCCCCACCCCAGCCAGGGTGTTAATGCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340957.9
ENST00000418281.5
CDS-3UTR TCA 90 bp CATCCTTTCTTCCACCTCCCGCTCAGAGAGCTCTGCGTGAATGGGCAGCCCGGCGGGCGAGTTGTAGAGTaGGTCCTGGGCCTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: HPFFHLPLRELCVNGQPGGRVVE*VLGLQW
Trigger: CCACTGGAGGCCCAGGACTCACTCTACAACTCGCCC...GCCGGGCTGCCCATTCACGCAGAGCTCTCTGAGCGGGAGGTGGAAGAAAGGATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR TCA 90 bp ACACCAACCTTGTCCTGGGCCCCTGTGGCCTGTCATTTAGAGCTGCCCCTCGTCCTGGGCAGGGGCCCTTaGGGGACGGCTCAACCCATA +
Preference number: 4 (lower is better)
Translates to: TPTLSWAPVACHLELPLVLGRGP*GTAQPI
Trigger: TATGGGTTGAGCCGTCCCTCAAGGGCCCCTGCCCAG...GACGAGGGGCAGCTCTAAATGACAGGCCACAGGGGCCCAGGACAAGGTTGGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR TCA 90 bp AGCACGAGCCCAGCTGGGCAGGGGCCCTTGAGGGACGGCTCAACCCATAGGCTCGAGACGATGGAGAGGTaGATGAAGCACAGCACGAGC +
Preference number: 4 (lower is better)
Translates to: STSPAGQGPLRDGSTHRLETMER*MKHSTS
Trigger: GCTCGTGCTGTGCTTCATTCACCTCTCCATCGTCTC...GAGCCTATGGGTTGAGCCGTCCCTCAAGGGCCCCTGCCCAGCTGGGCTCGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
CDS-3UTR TCA 90 bp TGCCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAACAGCCCGGCTGGCTGTaGGGCGCCAGCACACTGCCC +
Preference number: 4 (lower is better)
Translates to: CPLALVLTLGPLTCQSLQQPGWL*GASTLP
Trigger: GGGCAGTGTGCTGGCGCCTCACAGCCAGCCGGGCTG...TTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR TCA 90 bp AGCCATCCTTTCTTCCACCTCCCGCTCAGAGAGCTCTGCGTGAATGGGCAGCCCTCAGAGAGCTCTGCGTaGATGGGCAGCCCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: SHPFFHLPLRELCVNGQPSESSA*MGSPAG
Trigger: GCCAGCCGGGCTGCCCATTCACGCAGAGCTCTCTGA...GGGCTGCCCATTCACGCAGAGCTCTCTGAGCGGGAGGTGGAAGAAAGGATGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR GCA 90 bp CCAGCACACTGCCCGCACATCCTAGGAGGGGTTGGGAAAGGGCCCAGGCCCCATATCCACCGAAGACCATaGTCGGAGCTTGGCTTCCGC +
Preference number: 4 (lower is better)
Translates to: PAHCPHILGGVGKGPRPHIHRRP*SELGFR
Trigger: GCGGAAGCCAAGCTCCGAGCATGGTCTTCGGTGGAT...ATGGGGCCTGGGCCCTTTCCCAACCCCTCCTAGGATGTGCGGGCAGTGTGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR GCA 90 bp GGCCTCCACTACGTGGGCATTAACACCCTGGCTGGGGTGGGGCCCTGTACTGTAGCTGCCGTTCCCAGCTaGCCGTTAGTGGTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: GLHYVGINTLAGVGPCTVAAVPS*PLVVGR
Trigger: TCTGCCCACCACTAACGGGCAGCTGGGAACGGCAGC...TACAGTACAGGGCCCCACCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000639617.1
CDS-3UTR GCA 90 bp CTTGGAATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGTGGGCACAGAGGCTCTaGCCCTGGCAGCAGCCGGGG +
Preference number: 4 (lower is better)
Translates to: LGMQDLPEASTTWALTPWWAQRL*PWQQPG
Trigger: CCCCGGCTGCTGCCAGGGGCAGAGCCTCTGTGCCCA...CCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCATTCCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
CDS-3UTR GCA 90 bp CCTTGGAATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGTGGGCACAGAGGCTCTaGCCCTGGCAGCAGCCGGGG +
Preference number: 4 (lower is better)
Translates to: PWNAGSARGLHYVGINTLWAQRL*PWQQPG
Trigger: CCCCGGCTGCTGCCAGGGGCAGAGCCTCTGTGCCCA...CAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCATTCCAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
CDS-3UTR GCA 90 bp AGCACGAGCCCAGCTGGGCAGGGGCCCTTGAGGGACGGCTCAACCCATAGGCTCCACTGGCACAATTCCTaGCTCTCAGCAGGCATCAGC +
Preference number: 4 (lower is better)
Translates to: STSPAGQGPLRDGSTHRLHWHNS*LSAGIS
Trigger: GCTGATGCCTGCTGAGAGGCAGGAATTGTGCCAGTG...GAGCCTATGGGTTGAGCCGTCCCTCAAGGGCCCCTGCCCAGCTGGGCTCGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
CDS-3UTR CCA 90 bp GCGCCAGCACACTGCCCGCACATCCTAGGAGGGGTTGGGAAAGGGCCCAGGCCCGTTGGTCTCCCTCACTaGTCTTTGGCTCTTGGGGAA +
Preference number: 4 (lower is better)
Translates to: APAHCPHILGGVGKGPRPVGLPH*SLALGE
Trigger: TTCCCCAAGAGCCAAAGACCAGTGAGGGAGACCAAC...GGGCCTGGGCCCTTTCCCAACCCCTCCTAGGATGTGCGGGCAGTGTGCTGGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310585.4
CDS-3UTR CCA 90 bp AACACCCTGGCTGGGGTGGGGCCCTGTACTGTAGCCTTGGCCTTTCATTCAGACGGCCGGGAGAACCGGTaGCCGGTGAACAGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: NTLAGVGPCTVALAFHSDGRENR*PVNRSW
Trigger: CCAGGACCTGTTCACCGGCCACCGGTTCTCCCGGCC...GTCTGAATGAAAGGCCAAGGCTACAGTACAGGGCCCCACCCCAGCCAGGGTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp TTCCAGCTCCGGAAGGCCATCGAGGGCTCTGTCACAGCACAGGGTGTGAAAGTCGGCCGGGAGAACCGGTaGCCGGTGAACAGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: FQLRKAIEGSVTAQGVKVGRENR*PVNRSW
Trigger: CCAGGACCTGTTCACCGGCCACCGGTTCTCCCGGCC...GACTTTCACACCCTGTGCTGTGACAGAGCCCTCGATGGCCTTCCGGAGCTGGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR CCA 90 bp CCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGGGGCTCCACGGAGCCCTaGCGCACAGGCCGGGAGAAC +
Preference number: 4 (lower is better)
Translates to: PVGSRSYLGPSYLPKPTRGSTEP*RTGREN
Trigger: GTTCTCCCGGCCTGTGCGCCAGGGCTCCGTGGAGCC...CCTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp CTTGGAATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGGGCTCCACGGAGCCCTaGCGCACAGGCCGGGAGAAC +
Preference number: 4 (lower is better)
Translates to: LGMQDLPEASTTWALTPWGSTEP*RTGREN
Trigger: GTTCTCCCGGCCTGTGCGCCAGGGCTCCGTGGAGCC...CCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCATTCCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp AACATGAAGTCCCAGCTCTGTGGCAACCAGAGCCATCCTTTCTTCCACCTCCCGTCATCGCCCAGCAGCTaGGAGGCCAGCCGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: NMKSQLCGNQSHPFFHLPSSPSS*EASRAG
Trigger: CCCGGCCCGGCTGGCCTCCCAGCTGCTGGGCGATGA...CGGGAGGTGGAAGAAAGGATGGCTCTGGTTGCCACAGAGCTGGGACTTCATGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp ATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGCTGGGGGGTGGGCAGAGTGGCTaGCAGTCCTTGCAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: MQDLPEASTTWALTPWLGGGQSG*QSLQGA
Trigger: AGCCCCCTGCAAGGACTGCCAGCCACTCTGCCCACC...CCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCAT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000639617.1
CDS-3UTR CCA 90 bp GATCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGCTGGGGTGGGGCGAGCCCTCTAGGCTGTaGAGCTCTGCTGGGAGCCTT +
Preference number: 4 (lower is better)
Translates to: DLPEASTTWALTPWLGWGEPSRL*SSAGSL
Trigger: AAGGCTCCCAGCAGAGCTCCACAGCCTAGAGGGCTC...GCCCCACCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
CDS-3UTR CCA 90 bp CCTCCCGCTCAGAGAGCTCTGCGTGAATGGGCAGCCCGGCTGGCTGTGAGGCGCCCTGTGGCCCTCTTGTaGCCCTCTCTAGAAGAACAT +
Preference number: 4 (lower is better)
Translates to: PPAQRALREWAARLAVRRPVALL*PSLEEH
Trigger: ATGTTCTTCTAGAGAGGGCCACAAGAGGGCCACAGG...GCGCCTCACAGCCAGCCGGGCTGCCCATTCACGCAGAGCTCTCTGAGCGGGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp GATCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGCTGGGGTGGGGCTGGGCATTAACACCCTaGCTGGGGTGGGGCCCTGTA +
Preference number: 4 (lower is better)
Translates to: DLPEASTTWALTPWLGWGWALTP*LGWGPV
Trigger: TACAGGGCCCCACCCCAGCCAGGGTGTTAATGCCCA...GCCCCACCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp TCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGCTGGGGTGGGGCCCGAGGCCTCCACTACGTaGGCATTAACACCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SARGLHYVGINTLAGVGPEASTT*ALTPWL
Trigger: CAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCCTC...GGGCCCCACCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp TGTGAGGCGCCAGCACACTGCCCGCACATCCTAGGAGGGGTTGGGAAAGGGCCCGAGGCCTCCACTACGTaGGCATTAACACCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: CEAPAHCPHILGGVGKGPEASTT*ALTPWL
Trigger: CAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCCTC...GGGCCCTTTCCCAACCCCTCCTAGGATGTGCGGGCAGTGTGCTGGCGCCTCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp GTCATGGCCTCCCCCGGGAGGGCAGCCCTTCCGACAGCGACGACAAATGCCAATATGGCTCTGAGGAGGTaGGAACACCAGGGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: VMASPGRAALPTATTNANMALRR*EHQGSA
Trigger: GGCTGAGCCCTGGTGTTCCCACCTCCTCAGAGCCAT...ATTGGCATTTGTCGTCGCTGTCGGAAGGGCTGCCCTCCCGGGGGAGGCCATGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR CCA 90 bp GCGCCAGCACACTGCCCGCACATCCTAGGAGGGGTTGGGAAAGGGCCCAGGCCCAGTCCCCTCCCCATTTaGAACCTGTGCCTAGTCACA +
Preference number: 4 (lower is better)
Translates to: APAHCPHILGGVGKGPRPSPLPI*NLCLVT
Trigger: TGTGACTAGGCACAGGTTCCAAATGGGGAGGGGACT...GGGCCTGGGCCCTTTCCCAACCCCTCCTAGGATGTGCGGGCAGTGTGCTGGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR TCA 90 bp CCATCCTTTCTTCCACCTCCCGCTCAGAGAGCTCTGCGTGAATGGGCAGCCCGGGGTGGGAGAAGGGGCTaGGATTCACCTGAGCAAGGG +
Preference number: 4 (lower is better)
Translates to: PSFLPPPAQRALREWAARGGRRG*DSPEQG
Trigger: CCCTTGCTCAGGTGAATCTCAGCCCCTTCTCCCACC...CCGGGCTGCCCATTCACGCAGAGCTCTCTGAGCGGGAGGTGGAAGAAAGGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310585.4
CDS-3UTR TCA 90 bp AACACCCTGGCTGGGGTGGGGCCCTGTACTGTAGCCTTGGCCTTTCATTCAGACAGAACCGGTGGCCGGTaGACAGGTCCTGGAGGTGCG +
Preference number: 4 (lower is better)
Translates to: NTLAGVGPCTVALAFHSDRTGGR*TGPGGA
Trigger: CGCACCTCCAGGACCTGTTCACCGGCCACCGGTTCT...GTCTGAATGAAAGGCCAAGGCTACAGTACAGGGCCCCACCCCAGCCAGGGTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR TCA 90 bp CCTTTCTTCCACCTCCCGCTCAGAGAGCTCTGCGTGAATGGGCAGCCCGGCTGGCCCTCCAGGTGGGGGTaGTTCTATCAAGCACTGCAC +
Preference number: 4 (lower is better)
Translates to: PFFHLPLRELCVNGQPGWPSRWG*FYQALH
Trigger: GTGCAGTGCTTGATAGAATCACCCCCACCTGGAGGG...CCAGCCGGGCTGCCCATTCACGCAGAGCTCTCTGAGCGGGAGGTGGAAGAAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
CDS-3UTR TCA 90 bp CCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGCTGGGGTGGGGCCCTGTACCCTCCAGGTGGGGGTaGTTCTATCAAGCACTGCAC +
Preference number: 4 (lower is better)
Translates to: PEASTTWALTPWLGWGPVPSRWG*FYQALH
Trigger: GTGCAGTGCTTGATAGAATCACCCCCACCTGGAGGG...TACAGGGCCCCACCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
CDS-3UTR TCA 90 bp GCTTGTGCCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCCTGGGCAGGGGCCCTTaGGGGACGGCTCAACCCATA +
Preference number: 4 (lower is better)
Translates to: ACARWLSFLPWALLPAKALGRGP*GTAQPI
Trigger: TATGGGTTGAGCCGTCCCTCAAGGGCCCCTGCCCAG...GGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGGCACAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR TCA 90 bp GCTTGTGCCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTCAGAGAGCTCTGCGTaGATGGGCAGCCCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: ACARWLSFLPWALLPAKASESSA*MGSPAG
Trigger: GCCAGCCGGGCTGCCCATTCACGCAGAGCTCTCTGA...GGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGGCACAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR TCA 90 bp AGCACGAGCCCAGCTGGGCAGGGGCCCTTGAGGGACGGCTCAACCCATAGGCTCAGAGACACTCCCTCATaGCTGTCACTCACTGGCACA +
Preference number: 4 (lower is better)
Translates to: STSPAGQGPLRDGSTHRLRDTPS*LSLTGT
Trigger: TGTGCCAGTGAGTGACAGTCATGAGGGAGTGTCTCT...GAGCCTATGGGTTGAGCCGTCCCTCAAGGGCCCCTGCCCAGCTGGGCTCGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
CDS-3UTR GCA 90 bp GCTTGTGCCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCGTGGCTGGCAGTCCTTaGAGGGGGCTGGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: ACARWLSFLPWALLPAKAVAGSP*RGLAPP
Trigger: AGGAGGAGCCAGCCCCCTGCAAGGACTGCCAGCCAC...GGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGGCACAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000639617.1
CDS-3UTR GCA 90 bp AAAACACACAACGGAGAAGCGAGCGCTCCCAGGAGCCCTCTAGGCTGTGGAGCTCCGCTCAGAGAGCTCTaGGTGAATGGGCAGCCCGGC +
Preference number: 4 (lower is better)
Translates to: KTHNGEASAPRSPLGCGAPLREL*VNGQPG
Trigger: GCCGGGCTGCCCATTCACGCAGAGCTCTCTGAGCGG...AGCTCCACAGCCTAGAGGGCTCCTGGGAGCGCTCGCTTCTCCGTTGTGTGTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
CDS-3UTR GCA 90 bp TGTGAGGCGCCAGCACACTGCCCGCACATCCTAGGAGGGGTTGGGAAAGGGCCCCACTGGCACAATTCCTaGCTCTCAGCAGGCATCAGC +
Preference number: 4 (lower is better)
Translates to: CEAPAHCPHILGGVGKGPHWHNS*LSAGIS
Trigger: GCTGATGCCTGCTGAGAGGCAGGAATTGTGCCAGTG...GGGCCCTTTCCCAACCCCTCCTAGGATGTGCGGGCAGTGTGCTGGCGCCTCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR GCA 90 bp TGTGAGGCGCCAGCACACTGCCCGCACATCCTAGGAGGGGTTGGGAAAGGGCCCCCAGTGACCTTGGAATaGAGGATCTGCCAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: CEAPAHCPHILGGVGKGPPVTLE*RICQRP
Trigger: AGGCCTCTGGCAGATCCTGCATTCCAAGGTCACTGG...GGGCCCTTTCCCAACCCCTCCTAGGATGTGCGGGCAGTGTGCTGGCGCCTCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR GCA 90 bp TCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGCTGGGGTGGGGCCCCCAGTGACCTTGGAATaGAGGATCTGCCAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: SARGLHYVGINTLAGVGPPVTLE*RICQRP
Trigger: AGGCCTCTGGCAGATCCTGCATTCCAAGGTCACTGG...GGGCCCCACCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp CCATCCTTTCTTCCACCTCCCGCTCAGAGAGCTCTGCGTGAATGGGCAGCCCGGAGCGCAGCGATCTCCTaGATAGTTAGGGCTCGCCGG +
Preference number: 4 (lower is better)
Translates to: PSFLPPPAQRALREWAARSAAIS*IVRARR
Trigger: CCGGCGAGCCCTAACTATCCAGGAGATCGCTGCGCT...CCGGGCTGCCCATTCACGCAGAGCTCTCTGAGCGGGAGGTGGAAGAAAGGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000639617.1
CDS-3UTR CCA 90 bp TCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGCTGGGGTGGGGCCCCATAGGAGTCATCAGTaGAGTCCTCGCCATCCACCG +
Preference number: 4 (lower is better)
Translates to: SARGLHYVGINTLAGVGPHRSHQ*SPRHPP
Trigger: CGGTGGATGGCGAGGACTCCACTGATGACTCCTATG...GGGCCCCACCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp GTGGCCCTCTTGTGGCCCTCTCTAGAAGAACATGAAGTCCCAGCTCTGTGGCAAGGCTCCACGGAGCCCTaGCGCACAGGCCGGGAGAAC +
Preference number: 4 (lower is better)
Translates to: VALLWPSLEEHEVPALWQGSTEP*RTGREN
Trigger: GTTCTCCCGGCCTGTGCGCCAGGGCTCCGTGGAGCC...TTGCCACAGAGCTGGGACTTCATGTTCTTCTAGAGAGGGCCACAAGAGGGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp CGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGGCCTCCCGGCCACCCCTGTaGCCCTCTTGTGGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: RWLSFLPWALLPAKAYKASRPPL*PSCGPL
Trigger: GAGAGGGCCACAAGAGGGCCACAGGGGTGGCCGGGA...GGCCTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp AGTCCAGTGACCTTGGAATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATTCCCGGCCACCCCTGTaGCCCTCTTGTGGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: SPVTLECRICQRPPLRGHSRPPL*PSCGPL
Trigger: GAGAGGGCCACAAGAGGGCCACAGGGGTGGCCGGGA...ATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCATTCCAAGGTCACTGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp CATCCTTTCTTCCACCTCCCGCTCAGAGAGCTCTGCGTGAATGGGCAGCCCGGCTGGGCATTAACACCCTaGCTGGGGTGGGGCCCTGTA +
Preference number: 4 (lower is better)
Translates to: HPFFHLPLRELCVNGQPGWALTP*LGWGPV
Trigger: TACAGGGCCCCACCCCAGCCAGGGTGTTAATGCCCA...GCCGGGCTGCCCATTCACGCAGAGCTCTCTGAGCGGGAGGTGGAAGAAAGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp GTCATGGCCTCCCCCGGGAGGGCAGCCCTTCCGACAGCGACGACAAATGCCAATACACCAACCTTGTCCTaGGCCCCTGTGGCCTGTCAT +
Preference number: 4 (lower is better)
Translates to: VMASPGRAALPTATTNANTPTLS*APVACH
Trigger: ATGACAGGCCACAGGGGCCCAGGACAAGGTTGGTGT...ATTGGCATTTGTCGTCGCTGTCGGAAGGGCTGCCCTCCCGGGGGAGGCCATGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR TCA 90 bp CCTTGGAATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGAGAACCGGTGGCCGGTaGACAGGTCCTGGAGGTGCG +
Preference number: 4 (lower is better)
Translates to: PWNAGSARGLHYVGINTLRTGGR*TGPGGA
Trigger: CGCACCTCCAGGACCTGTTCACCGGCCACCGGTTCT...CAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCATTCCAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR TCA 90 bp CGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGGCCCTGGGCAGGGGCCCTTaGGGGACGGCTCAACCCATA +
Preference number: 4 (lower is better)
Translates to: RWLSFLPWALLPAKAYKALGRGP*GTAQPI
Trigger: TATGGGTTGAGCCGTCCCTCAAGGGCCCCTGCCCAG...GGCCTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR TCA 90 bp GGCCTCCACTACGTGGGCATTAACACCCTGGCTGGGGTGGGGCCCTGTACTGTACGATGGAGAGGTGAATaGAGCACAGCACGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: GLHYVGINTLAGVGPCTVRWRGE*STARAQ
Trigger: CTGGGCTCGTGCTGTGCTTCATTCACCTCTCCATCG...TACAGTACAGGGCCCCACCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR TCA 90 bp CGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGGCCTCAGAGAGCTCTGCGTaGATGGGCAGCCCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: RWLSFLPWALLPAKAYKASESSA*MGSPAG
Trigger: GCCAGCCGGGCTGCCCATTCACGCAGAGCTCTCTGA...GGCCTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR TCA 90 bp AGTCCAGTGACCTTGGAATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATTCAGAGAGCTCTGCGTaGATGGGCAGCCCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: SPVTLECRICQRPPLRGHSESSA*MGSPAG
Trigger: GCCAGCCGGGCTGCCCATTCACGCAGAGCTCTCTGA...ATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCATTCCAAGGTCACTGGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR TCA 90 bp TGTGAGGCGCCAGCACACTGCCCGCACATCCTAGGAGGGGTTGGGAAAGGGCCCAGAGACACTCCCTCATaGCTGTCACTCACTGGCACA +
Preference number: 4 (lower is better)
Translates to: CEAPAHCPHILGGVGKGPRDTPS*LSLTGT
Trigger: TGTGCCAGTGAGTGACAGTCATGAGGGAGTGTCTCT...GGGCCCTTTCCCAACCCCTCCTAGGATGTGCGGGCAGTGTGCTGGCGCCTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR TCA 90 bp CCAGCACACTGCCCGCACATCCTAGGAGGGGTTGGGAAAGGGCCCAGGCCCCATAGAGACACTCCCTCATaGCTGTCACTCACTGGCACA +
Preference number: 4 (lower is better)
Translates to: PAHCPHILGGVGKGPRPHRDTPS*LSLTGT
Trigger: TGTGCCAGTGAGTGACAGTCATGAGGGAGTGTCTCT...ATGGGGCCTGGGCCCTTTCCCAACCCCTCCTAGGATGTGCGGGCAGTGTGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR TCA 90 bp GTGGGCATTAACACCCTGGCTGGGGTGGGGCCCTGTACTGTAGCCTTGGCCTTTACCTCTGGCAAGTCCTaGCTGTCCACCGAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: VGINTLAGVGPCTVALAFTSGKS*LSTEEG
Trigger: CCCTTCCTCGGTGGACAGTCAGGACTTGCCAGAGGT...AAAGGCCAAGGCTACAGTACAGGGCCCCACCCCAGCCAGGGTGTTAATGCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383847.7
ENST00000639617.1
CDS-3UTR TCA 90 bp CCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGGTCACAGCACAGGGTGTaGAAGTCCGGCCGCCCCTCG +
Preference number: 4 (lower is better)
Translates to: PVGSRSYLGPSYLPKPTRSQHRV*KSGRPS
Trigger: CGAGGGGCGGCCGGACTTTCACACCCTGTGCTGTGA...CCTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR TCA 90 bp TCATGGCCTCCCCCGGGAGGGCAGCCCTTCCGACAGCGACGACAAATGCCAATGCTAAAGGAGGTGAGGTaGTGGTGGCCTCCAAAGCTG +
Preference number: 4 (lower is better)
Translates to: SWPPPGGQPFRQRRQMPMLKEVR*WWPPKL
Trigger: CAGCTTTGGAGGCCACCATCACCTCACCTCCTTTAG...CATTGGCATTTGTCGTCGCTGTCGGAAGGGCTGCCCTCCCGGGGGAGGCCATGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR GCA 90 bp GGCCTCCACTACGTGGGCATTAACACCCTGGCTGGGGTGGGGCCCTGTACTGTATCCGCGATGGCAAACTaGTCAGCCACTCCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: GLHYVGINTLAGVGPCTVSAMAN*SATPAA
Trigger: TGCAGCAGGAGTGGCTGAGCAGTTTGCCATCGCGGA...TACAGTACAGGGCCCCACCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR GCA 90 bp AACACCCTGGCTGGGGTGGGGCCCTGTACTGTAGCCTTGGCCTTTCATTCAGACTCAGAGGCTTGCCGCTaGCGTTCCCAGCTGCCCGTT +
Preference number: 4 (lower is better)
Translates to: NTLAGVGPCTVALAFHSDSEACR*RSQLPV
Trigger: AACGGGCAGCTGGGAACGGCAGCGGCAAGCCTCTGA...GTCTGAATGAAAGGCCAAGGCTACAGTACAGGGCCCCACCCCAGCCAGGGTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000639617.1
CDS-3UTR GCA 90 bp CTCTTGTGGCCCTCTCTAGAAGAACATGAAGTCCCAGCTCTGTGGCAACCAGAGTGGGCACAGAGGCTCTaGCCCTGGCAGCAGCCGGGG +
Preference number: 4 (lower is better)
Translates to: LLWPSLEEHEVPALWQPEWAQRL*PWQQPG
Trigger: CCCCGGCTGCTGCCAGGGGCAGAGCCTCTGTGCCCA...CTCTGGTTGCCACAGAGCTGGGACTTCATGTTCTTCTAGAGAGGGCCACAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
CDS-3UTR GCA 90 bp CCTCCCGCTCAGAGAGCTCTGCGTGAATGGGCAGCCCGGCTGGCTGTGAGGCGCAGGGTGGAGGGTACATaGTTTCATCATTCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: PPAQRALREWAARLAVRRRVEGT*FHHSKA
Trigger: GGCTTTGGAATGATGAAAGCATGTACCCTCCACCCT...GCGCCTCACAGCCAGCCGGGCTGCCCATTCACGCAGAGCTCTCTGAGCGGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR GCA 90 bp CCTTGGAATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGAGGCGCCAGCACACTaGCCGCACATCCTAGGAGGG +
Preference number: 4 (lower is better)
Translates to: PWNAGSARGLHYVGINTLEAPAH*PHILGG
Trigger: CCCTCCTAGGATGTGCGGGCAGTGTGCTGGCGCCTC...CAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCATTCCAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR GCA 90 bp GATCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGCTGGGGTGGGGCCACTGGCACAATTCCTaGCTCTCAGCAGGCATCAGC +
Preference number: 4 (lower is better)
Translates to: DLPEASTTWALTPWLGWGHWHNS*LSAGIS
Trigger: GCTGATGCCTGCTGAGAGGCAGGAATTGTGCCAGTG...GCCCCACCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR GCA 90 bp TCATGGCCTCCCCCGGGAGGGCAGCCCTTCCGACAGCGACGACAAATGCCAATGTTGGGCCCTCTTACCTaGCAAAGCCTACAAGGCCCT +
Preference number: 4 (lower is better)
Translates to: SWPPPGGQPFRQRRQMPMLGPLT*QSLQGP
Trigger: AGGGCCTTGTAGGCTTTGGCAGGTAAGAGGGCCCAA...CATTGGCATTTGTCGTCGCTGTCGGAAGGGCTGCCCTCCCGGGGGAGGCCATGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR GCA 90 bp GATCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGCTGGGGTGGGGCCCAGGCCCTTCACGCTaGCACAGAAACATTTTGCCC +
Preference number: 4 (lower is better)
Translates to: DLPEASTTWALTPWLGWGPGPSR*HRNILP
Trigger: GGGCAAAATGTTTCTGTGGCAGCGTGAAGGGCCTGG...GCCCCACCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383847.7
ENST00000639617.1
CDS-3UTR GCA 90 bp CTTGGAATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGAAGGGCGGGAGGACCTaGTCCAGCCTCGGAGGGTTC +
Preference number: 4 (lower is better)
Translates to: LGMQDLPEASTTWALTPWKGGRT*SSLGGF
Trigger: GAACCCTCCGAGGCTGGAGCAGGTCCTCCCGCCCTT...CCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCATTCCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383847.7
ENST00000639617.1
CDS-3UTR GCA 90 bp CTTTCATTCCTTCTGCCTTCGGAAGGCAGGAGGCAGCTACAGCTGGAGGCTGCAAAGGGCGGGAGGACCTaGTCCAGCCTCGGAGGGTTC +
Preference number: 4 (lower is better)
Translates to: LSFLLPSEGRRQLQLEAAKGGRT*SSLGGF
Trigger: GAACCCTCCGAGGCTGGAGCAGGTCCTCCCGCCCTT...TGCAGCCTCCAGCTGTAGCTGCCTCCTGCCTTCCGAAGGCAGAAGGAATGAAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR GCA 90 bp CATCCTTTCTTCCACCTCCCGCTCAGAGAGCTCTGCGTGAATGGGCAGCCCGGCCCTCCAGACCTGGGGTaGCAGCTTCTCCCAGTTCAT +
Preference number: 4 (lower is better)
Translates to: HPFFHLPLRELCVNGQPGPPDLG*QLLPVH
Trigger: ATGAACTGGGAGAAGCTGGCACCCCAGGTCTGGAGG...GCCGGGCTGCCCATTCACGCAGAGCTCTCTGAGCGGGAGGTGGAAGAAAGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR CCA 90 bp GATCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGCTGGGGTGGGGCGCAGACTCGGCAAGATaGAAACCAAACCCCCACACC +
Preference number: 4 (lower is better)
Translates to: DLPEASTTWALTPWLGWGADSAR*KPNPHT
Trigger: GGTGTGGGGGTTTGGTTTCCATCTTGCCGAGTCTGC...GCCCCACCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310585.4
CDS-3UTR CCA 90 bp TCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGCTGGGGTGGGGCCCCCTTGCTCCTCCTCTTaGTCTTCCCATCCACATTCC +
Preference number: 4 (lower is better)
Translates to: SARGLHYVGINTLAGVGPPCSSS*SSHPHS
Trigger: GGAATGTGGATGGGAAGACCAAGAGGAGGAGCAAGG...GGGCCCCACCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310585.4
CDS-3UTR CCA 90 bp CCTTTCTTCCACCTCCCGCTCAGAGAGCTCTGCGTGAATGGGCAGCCCGGCTGGGTAGGCTTGGTCACGTaGTCCTTCACCACCTGGGAA +
Preference number: 4 (lower is better)
Translates to: PFFHLPLRELCVNGQPGWVGLVT*SFTTWE
Trigger: TTCCCAGGTGGTGAAGGACCACGTGACCAAGCCTAC...CCAGCCGGGCTGCCCATTCACGCAGAGCTCTCTGAGCGGGAGGTGGAAGAAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp TTCTTCCACCTCCCGCTCAGAGAGCTCTGCGTGAATGGGCAGCCCGGCTGGCTGGTAGGCTTGGTCACGTaGTCCTTCACCACCTGGGAA +
Preference number: 4 (lower is better)
Translates to: FFHLPLRELCVNGQPGWLVGLVT*SFTTWE
Trigger: TTCCCAGGTGGTGAAGGACCACGTGACCAAGCCTAC...CAGCCAGCCGGGCTGCCCATTCACGCAGAGCTCTCTGAGCGGGAGGTGGAAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp CCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGCTGGGGTGGGGCCCTGTAACCATGCTCGGAGCTTaGCTTCCGCGATGGCAAACT +
Preference number: 4 (lower is better)
Translates to: PEASTTWALTPWLGWGPVTMLGA*LPRWQT
Trigger: AGTTTGCCATCGCGGAAGCCAAGCTCCGAGCATGGT...TACAGGGCCCCACCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp TCATGGCCTCCCCCGGGAGGGCAGCCCTTCCGACAGCGACGACAAATGCCAATGCATAGGAGTCATCAGTaGAGTCCTCGCCATCCACCG +
Preference number: 4 (lower is better)
Translates to: SWPPPGGQPFRQRRQMPMHRSHQ*SPRHPP
Trigger: CGGTGGATGGCGAGGACTCCACTGATGACTCCTATG...CATTGGCATTTGTCGTCGCTGTCGGAAGGGCTGCCCTCCCGGGGGAGGCCATGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR CCA 90 bp CTCTTGTGGCCCTCTCTAGAAGAACATGAAGTCCCAGCTCTGTGGCAACCAGAGCCGGTGAACAGGTCCTaGAGGTGCGGCCCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: LLWPSLEEHEVPALWQPEPVNRS*RCGPRG
Trigger: GCCCCTGGGGCCGCACCTCCAGGACCTGTTCACCGG...CTCTGGTTGCCACAGAGCTGGGACTTCATGTTCTTCTAGAGAGGGCCACAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp TCCAGTGACCTTGGAATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATTAGGCCGGGAGAACCGGTaGCCGGTGAACAGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: SSDLGMQDLPEASTTWALGRENR*PVNRSW
Trigger: CCAGGACCTGTTCACCGGCCACCGGTTCTCCCGGCC...TAATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCATTCCAAGGTCACTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp TTCTTCCACCTCCCGCTCAGAGAGCTCTGCGTGAATGGGCAGCCCGGCTGGCTGCTGCCAGGCATGATGTaGGTCACTGTTCCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: FFHLPLRELCVNGQPGWLLPGMM*VTVPLA
Trigger: AGCCAGAGGAACAGTGACCCACATCATGCCTGGCAG...CAGCCAGCCGGGCTGCCCATTCACGCAGAGCTCTCTGAGCGGGAGGTGGAAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
CDS-3UTR CCA 90 bp ATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGCTGGGGGAGCCCTCTAGGCTGTaGAGCTCTGCTGGGAGCCTT +
Preference number: 4 (lower is better)
Translates to: MQDLPEASTTWALTPWLGEPSRL*SSAGSL
Trigger: AAGGCTCCCAGCAGAGCTCCACAGCCTAGAGGGCTC...CCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
CDS-3UTR CCA 90 bp AACATGAAGTCCCAGCTCTGTGGCAACCAGAGCCATCCTTTCTTCCACCTCCCGCAGCACGAGCCCAGCTaGGCAGGGGCCCTTGAGGGA +
Preference number: 4 (lower is better)
Translates to: NMKSQLCGNQSHPFFHLPQHEPS*AGALEG
Trigger: TCCCTCAAGGGCCCCTGCCCAGCTGGGCTCGTGCTG...CGGGAGGTGGAAGAAAGGATGGCTCTGGTTGCCACAGAGCTGGGACTTCATGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp GCTTGTGCCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCAGAGCTCTGCGTGAATaGGCAGCCCGGCTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: ACARWLSFLPWALLPAKARALRE*AARLAV
Trigger: CACAGCCAGCCGGGCTGCCCATTCACGCAGAGCTCT...GGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGGCACAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp TCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGCTGGGGTGGGGCCCGAAGTCCCAGCTCTGTaGCAACCAGAGCCATCCTTT +
Preference number: 4 (lower is better)
Translates to: SARGLHYVGINTLAGVGPEVPAL*QPEPSF
Trigger: AAAGGATGGCTCTGGTTGCCACAGAGCTGGGACTTC...GGGCCCCACCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp TCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGCTGGGGTGGGGCCCCCTGTGGCCCTCTTGTaGCCCTCTCTAGAAGAACAT +
Preference number: 4 (lower is better)
Translates to: SARGLHYVGINTLAGVGPPVALL*PSLEEH
Trigger: ATGTTCTTCTAGAGAGGGCCACAAGAGGGCCACAGG...GGGCCCCACCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp AGCCATCCTTTCTTCCACCTCCCGCTCAGAGAGCTCTGCGTGAATGGGCAGCCCTGGGCATTAACACCCTaGCTGGGGTGGGGCCCTGTA +
Preference number: 4 (lower is better)
Translates to: SHPFFHLPLRELCVNGQPWALTP*LGWGPV
Trigger: TACAGGGCCCCACCCCAGCCAGGGTGTTAATGCCCA...GGGCTGCCCATTCACGCAGAGCTCTCTGAGCGGGAGGTGGAAGAAAGGATGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp AGCACGAGCCCAGCTGGGCAGGGGCCCTTGAGGGACGGCTCAACCCATAGGCTCAATGCTTGTGCCCGTTaGCTCTCGTTCTTACCTTGG +
Preference number: 4 (lower is better)
Translates to: STSPAGQGPLRDGSTHRLNACAR*LSFLPW
Trigger: CCAAGGTAAGAACGAGAGCCAACGGGCACAAGCATT...GAGCCTATGGGTTGAGCCGTCCCTCAAGGGCCCCTGCCCAGCTGGGCTCGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
CDS-3UTR CCA 90 bp CCAGCACACTGCCCGCACATCCTAGGAGGGGTTGGGAAAGGGCCCAGGCCCCATTGGTCCTTCACCACCTaGGAAATACCATGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: PAHCPHILGGVGKGPRPHWSFTT*EIPCRE
Trigger: CTCCCTGCATGGTATTTCCCAGGTGGTGAAGGACCA...ATGGGGCCTGGGCCCTTTCCCAACCCCTCCTAGGATGTGCGGGCAGTGTGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340957.9
ENST00000383847.7
ENST00000639617.1
CDS-3UTR CCA 90 bp GCGCCAGCACACTGCCCGCACATCCTAGGAGGGGTTGGGAAAGGGCCCAGGCCCCATCTCAACAGAACTTaGGATGCTGCTTGGACCCTA +
Preference number: 4 (lower is better)
Translates to: APAHCPHILGGVGKGPRPHLNRT*DAAWTL
Trigger: TAGGGTCCAAGCAGCATCCCAAGTTCTGTTGAGATG...GGGCCTGGGCCCTTTCCCAACCCCTCCTAGGATGTGCGGGCAGTGTGCTGGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR TCA 90 bp TGCCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAAGAACCGGTGGCCGGTaGACAGGTCCTGGAGGTGCG +
Preference number: 4 (lower is better)
Translates to: CPLALVLTLGPLTCQSLQRTGGR*TGPGGA
Trigger: CGCACCTCCAGGACCTGTTCACCGGCCACCGGTTCT...TTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR TCA 90 bp GCCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGTGGGGACACGGTCTGTaGGCAGTCGCTCTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: ARWLSFLPWALLPAKAYKWGHGL*AVALRL
Trigger: GAGCCTGAGAGCGACTGCTCACAGACCGTGTCCCCA...CTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR TCA 90 bp CCATCCTTTCTTCCACCTCCCGCTCAGAGAGCTCTGCGTGAATGGGCAGCCCGGAAAGGCAGGACTCTGTaGGGGGCGAGTTGTAGAGTG +
Preference number: 4 (lower is better)
Translates to: PSFLPPPAQRALREWAARKGRTL*GASCRV
Trigger: CACTCTACAACTCGCCCCTCACAGAGTCCTGCCTTT...CCGGGCTGCCCATTCACGCAGAGCTCTCTGAGCGGGAGGTGGAAGAAAGGATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000639617.1
CDS-3UTR GCA 90 bp TCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGCTGGGGTGGGGCCCCCTAATGATTCCACCTaGAAAGTCCCTGCTCCTACC +
Preference number: 4 (lower is better)
Translates to: SARGLHYVGINTLAGVGPPNDST*KVPAPT
Trigger: GGTAGGAGCAGGGACTTTGCAGGTGGAATCATTAGG...GGGCCCCACCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310585.4
CDS-3UTR GCA 90 bp AGCCATCCTTTCTTCCACCTCCCGCTCAGAGAGCTCTGCGTGAATGGGCAGCCCCTGCTCAGCCACTCCTaGTGCAAAGCGAGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: SHPFFHLPLRELCVNGQPLLSHS*CKASLL
Trigger: CAAGAGGCTCGCTTTGCAGCAGGAGTGGCTGAGCAG...GGGCTGCCCATTCACGCAGAGCTCTCTGAGCGGGAGGTGGAAGAAAGGATGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR GCA 90 bp ATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGCTGGGGCTGCTCAGCCACTCCTaGTGCAAAGCGAGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: MQDLPEASTTWALTPWLGLLSHS*CKASLL
Trigger: CAAGAGGCTCGCTTTGCAGCAGGAGTGGCTGAGCAG...CCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR GCA 90 bp ATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGCTGGGGTCCGCGATGGCAAACTaGTCAGCCACTCCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: MQDLPEASTTWALTPWLGSAMAN*SATPAA
Trigger: TGCAGCAGGAGTGGCTGAGCAGTTTGCCATCGCGGA...CCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR GCA 90 bp TTCTTCCACCTCCCGCTCAGAGAGCTCTGCGTGAATGGGCAGCCCGGCTGGCTGTTGGAATGCAGGATCTaGCAGAGGCCTCCACTACGT +
Preference number: 4 (lower is better)
Translates to: FFHLPLRELCVNGQPGWLLECRI*QRPPLR
Trigger: ACGTAGTGGAGGCCTCTGGCAGATCCTGCATTCCAA...CAGCCAGCCGGGCTGCCCATTCACGCAGAGCTCTCTGAGCGGGAGGTGGAAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR GCA 90 bp CCATCCTTTCTTCCACCTCCCGCTCAGAGAGCTCTGCGTGAATGGGCAGCCCGGCCAGGCCCTTCACGCTaGCACAGAAACATTTTGCCC +
Preference number: 4 (lower is better)
Translates to: PSFLPPPAQRALREWAARPGPSR*HRNILP
Trigger: GGGCAAAATGTTTCTGTGGCAGCGTGAAGGGCCTGG...CCGGGCTGCCCATTCACGCAGAGCTCTCTGAGCGGGAGGTGGAAGAAAGGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383847.7
ENST00000639617.1
CDS-3UTR GCA 90 bp ATTAACACCCTGGCTGGGGTGGGGCCCTGTACTGTAGCCTTGGCCTTTCATTCACCCAGGTCAGAGGCTTaGCGCTGCCGTTCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: INTLAGVGPCTVALAFHSPRSEA*RCRSQL
Trigger: CAGCTGGGAACGGCAGCGGCAAGCCTCTGACCTGGG...TGAATGAAAGGCCAAGGCTACAGTACAGGGCCCCACCCCAGCCAGGGTGTTAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR GCA 90 bp CCGGAAGGCCATCGAGGGCTCTGTCACAGCACAGGGTGTGAAAGTCCGGCCGCCATGAGAGGCATAGCGTaGTTCAGGCCAAGACTGGAA +
Preference number: 4 (lower is better)
Translates to: PEGHRGLCHSTGCESPAAMRGIA*FRPRLE
Trigger: TTCCAGTCTTGGCCTGAAGCACGCTATGCCTCTCAT...GGCGGCCGGACTTTCACACCCTGTGCTGTGACAGAGCCCTCGATGGCCTTCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR CCA 90 bp TGCCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGGGCTCGCCGGGACTTaGGCAGCATCGCGACTGTGT +
Preference number: 4 (lower is better)
Translates to: CPLALVLTLGPLTCQSLQGLAGT*AASRLC
Trigger: ACACAGTCGCGATGCTGCCCAAGTCCCGGCGAGCCC...TTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000639617.1
CDS-3UTR CCA 90 bp CTTTCATTCCTTCTGCCTTCGGAAGGCAGGAGGCAGCTACAGCTGGAGGCTGCACATGCAGGGAGGACCTaGCCAGCGCAGCGATCTCCT +
Preference number: 4 (lower is better)
Translates to: LSFLLPSEGRRQLQLEAAHAGRT*PAQRSP
Trigger: AGGAGATCGCTGCGCTGGCCAGGTCCTCCCTGCATG...TGCAGCCTCCAGCTGTAGCTGCCTCCTGCCTTCCGAAGGCAGAAGGAATGAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR CCA 90 bp CCATCCTTTCTTCCACCTCCCGCTCAGAGAGCTCTGCGTGAATGGGCAGCCCGGCATAGGAGTCATCAGTaGAGTCCTCGCCATCCACCG +
Preference number: 4 (lower is better)
Translates to: PSFLPPPAQRALREWAARHRSHQ*SPRHPP
Trigger: CGGTGGATGGCGAGGACTCCACTGATGACTCCTATG...CCGGGCTGCCCATTCACGCAGAGCTCTCTGAGCGGGAGGTGGAAGAAAGGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp CTTGGAATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGCATCCTAGGAGGGGTTaGGAAAGGGCCCAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: LGMQDLPEASTTWALTPWHPRRG*ERAQAP
Trigger: TGGGGCCTGGGCCCTTTCCCAACCCCTCCTAGGATG...CCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCATTCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp AGTCCAGTGACCTTGGAATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATAGAGCTCTGCGTGAATaGGCAGCCCGGCTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: SPVTLECRICQRPPLRGHRALRE*AARLAV
Trigger: CACAGCCAGCCGGGCTGCCCATTCACGCAGAGCTCT...ATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCATTCCAAGGTCACTGGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp CGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGGCCAGAGCTCTGCGTGAATaGGCAGCCCGGCTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: RWLSFLPWALLPAKAYKARALRE*AARLAV
Trigger: CACAGCCAGCCGGGCTGCCCATTCACGCAGAGCTCT...GGCCTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp TTCTTCCACCTCCCGCTCAGAGAGCTCTGCGTGAATGGGCAGCCCGGCTGGCTGGAAGTCCCAGCTCTGTaGCAACCAGAGCCATCCTTT +
Preference number: 4 (lower is better)
Translates to: FFHLPLRELCVNGQPGWLEVPAL*QPEPSF
Trigger: AAAGGATGGCTCTGGTTGCCACAGAGCTGGGACTTC...CAGCCAGCCGGGCTGCCCATTCACGCAGAGCTCTCTGAGCGGGAGGTGGAAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp AGCACGAGCCCAGCTGGGCAGGGGCCCTTGAGGGACGGCTCAACCCATAGGCTCATGACTGTCACTCACTaGCACAATTCCTGCCTCTCA +
Preference number: 4 (lower is better)
Translates to: STSPAGQGPLRDGSTHRLMTVTH*HNSCLS
Trigger: TGAGAGGCAGGAATTGTGCCAGTGAGTGACAGTCAT...GAGCCTATGGGTTGAGCCGTCCCTCAAGGGCCCCTGCCCAGCTGGGCTCGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
CDS-3UTR CCA 90 bp GCTTGTGCCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTGGGCATTAACACCCTaGCTGGGGTGGGGCCCTGTA +
Preference number: 4 (lower is better)
Translates to: ACARWLSFLPWALLPAKAWALTP*LGWGPV
Trigger: TACAGGGCCCCACCCCAGCCAGGGTGTTAATGCCCA...GGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGGCACAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp CCGGAAGGCCATCGAGGGCTCTGTCACAGCACAGGGTGTGAAAGTCCGGCCGCCGTTCTATTCCTGTTTTaGCTCCGGATGCTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: PEGHRGLCHSTGCESPAAVLFLF*LRMLSQ
Trigger: CTGGCTCAGCATCCGGAGCCAAAACAGGAATAGAAC...GGCGGCCGGACTTTCACACCCTGTGCTGTGACAGAGCCCTCGATGGCCTTCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR CCA 90 bp GTGGCCCTCTTGTGGCCCTCTCTAGAAGAACATGAAGTCCCAGCTCTGTGGCAAAGCCCCCTCCAGACCTaGGGTGCCAGCTTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: VALLWPSLEEHEVPALWQSPLQT*GASFSQ
Trigger: CTGGGAGAAGCTGGCACCCCAGGTCTGGAGGGGGCT...TTGCCACAGAGCTGGGACTTCATGTTCTTCTAGAGAGGGCCACAAGAGGGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR CCA 90 bp CCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGCTGGGGTGGGGCCCTGTAGAGGAGTCTGACATCTaGGTCCAGACATCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: PEASTTWALTPWLGWGPVEESDI*VQTSVP
Trigger: AGGGACAGATGTCTGGACCCAGATGTCAGACTCCTC...TACAGGGCCCCACCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR CCA 90 bp CATCCTTTCTTCCACCTCCCGCTCAGAGAGCTCTGCGTGAATGGGCAGCCCGGCCCCTTAAGGTCGGTGTaGGCTCTCCCTTCTCGGTAT +
Preference number: 4 (lower is better)
Translates to: HPFFHLPLRELCVNGQPGPLRSV*ALPSRY
Trigger: ATACCGAGAAGGGAGAGCCCACACCGACCTTAAGGG...GCCGGGCTGCCCATTCACGCAGAGCTCTCTGAGCGGGAGGTGGAAGAAAGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR TCA 90 bp AGCCATCCTTTCTTCCACCTCCCGCTCAGAGAGCTCTGCGTGAATGGGCAGCCCGGGCTGAGATTCACCTaGGCAAGGGAAGAAAGGGGA +
Preference number: 4 (lower is better)
Translates to: SHPFFHLPLRELCVNGQPGLRFT*AREERG
Trigger: TCCCCTTTCTTCCCTTGCTCAGGTGAATCTCAGCCC...GGGCTGCCCATTCACGCAGAGCTCTCTGAGCGGGAGGTGGAAGAAAGGATGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310585.4
CDS-3UTR TCA 90 bp AGTCCAGTGACCTTGGAATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATTTCCAGGGCAGCAGGTaGGTCACTCGGCTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: SPVTLECRICQRPPLRGHFQGSR*VTRLAP
Trigger: TGGAGCAAGCCGAGTGACTCACCTGCTGCCCTGGAA...ATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCATTCCAAGGTCACTGGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR TCA 90 bp ATTAACACCCTGGCTGGGGTGGGGCCCTGTACTGTAGCCTTGGCCTTTCATTCAGGGCGAGTTGTAGAGTaGGTCCTGGGCCTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: INTLAGVGPCTVALAFHSGRVVE*VLGLQW
Trigger: CCACTGGAGGCCCAGGACTCACTCTACAACTCGCCC...TGAATGAAAGGCCAAGGCTACAGTACAGGGCCCCACCCCAGCCAGGGTGTTAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR TCA 90 bp AGCCATCCTTTCTTCCACCTCCCGCTCAGAGAGCTCTGCGTGAATGGGCAGCCCAAAGGCAGGACTCTGTaGGGGGCGAGTTGTAGAGTG +
Preference number: 4 (lower is better)
Translates to: SHPFFHLPLRELCVNGQPKGRTL*GASCRV
Trigger: CACTCTACAACTCGCCCCTCACAGAGTCCTGCCTTT...GGGCTGCCCATTCACGCAGAGCTCTCTGAGCGGGAGGTGGAAGAAAGGATGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000639617.1
CDS-3UTR TCA 90 bp AACATGAAGTCCCAGCTCTGTGGCAACCAGAGCCATCCTTTCTTCCACCTCCCGCTCTGCTGGGAGCCTTaGGCCCACACTTGGGCACAG +
Preference number: 4 (lower is better)
Translates to: NMKSQLCGNQSHPFFHLPLCWEP*AHTWAQ
Trigger: CTGTGCCCAAGTGTGGGCTCAAGGCTCCCAGCAGAG...CGGGAGGTGGAAGAAAGGATGGCTCTGGTTGCCACAGAGCTGGGACTTCATGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
CDS-3UTR TCA 90 bp CACAACCATAAAAACGTACAGTCCAGTGACCTTGGAATGCAGGATCTGCCAGAGCAGCCCGGCTGGCTGTaGGGCGCCAGCACACTGCCC +
Preference number: 4 (lower is better)
Translates to: HNHKNVQSSDLGMQDLPEQPGWL*GASTLP
Trigger: GGGCAGTGTGCTGGCGCCTCACAGCCAGCCGGGCTG...CTCTGGCAGATCCTGCATTCCAAGGTCACTGGACTGTACGTTTTTATGGTTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR TCA 90 bp GTGGCCCTCTTGTGGCCCTCTCTAGAAGAACATGAAGTCCCAGCTCTGTGGCAAGGAGCCAGCCCTCTGTaGGGGGCGAGTTGTAGAGTG +
Preference number: 4 (lower is better)
Translates to: VALLWPSLEEHEVPALWQGASPL*GASCRV
Trigger: CACTCTACAACTCGCCCCTCACAGAGGGCTGGCTCC...TTGCCACAGAGCTGGGACTTCATGTTCTTCTAGAGAGGGCCACAAGAGGGCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418281.5
CDS-3UTR TCA 90 bp GTGGCCCTCTTGTGGCCCTCTCTAGAAGAACATGAAGTCCCAGCTCTGTGGCAACCTGCCTCATGGCTCTaGGGAGGTGGGAACACCAGG +
Preference number: 4 (lower is better)
Translates to: VALLWPSLEEHEVPALWQPASWL*GGGNTR
Trigger: CCTGGTGTTCCCACCTCCTCAGAGCCATGAGGCAGG...TTGCCACAGAGCTGGGACTTCATGTTCTTCTAGAGAGGGCCACAAGAGGGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR TCA 90 bp GCCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGTTTGGCTCCGGATGCTaGGCCAGTCCCCTCCCCATT +
Preference number: 4 (lower is better)
Translates to: ARWLSFLPWALLPAKAYKFGSGC*ASPLPI
Trigger: AATGGGGAGGGGACTGGCTCAGCATCCGGAGCCAAA...CTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR TCA 90 bp CTTTCATTCCTTCTGCCTTCGGAAGGCAGGAGGCAGCTACAGCTGGAGGCTGCAGACGACAAATGCCAATaGGCCCCTCGTGGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: LSFLLPSEGRRQLQLEAADDKCQ*APRGWP
Trigger: AGGCCACCCACGAGGGGCTCATTGGCATTTGTCGTC...TGCAGCCTCCAGCTGTAGCTGCCTCCTGCCTTCCGAAGGCAGAAGGAATGAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR TCA 90 bp ATTAACACCCTGGCTGGGGTGGGGCCCTGTACTGTAGCCTTGGCCTTTCATTCACTGCACAGCCACTCCTaGGGACCCGCCTGGAACAAG +
Preference number: 4 (lower is better)
Translates to: INTLAGVGPCTVALAFHSLHSHS*GPAWNK
Trigger: CTTGTTCCAGGCGGGTCCTCAGGAGTGGCTGTGCAG...TGAATGAAAGGCCAAGGCTACAGTACAGGGCCCCACCCCAGCCAGGGTGTTAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR GCA 90 bp TGTGAGGCGCCAGCACACTGCCCGCACATCCTAGGAGGGGTTGGGAAAGGGCCCCCTCCTCCAATCCCATaGTATTTTCTCAGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: CEAPAHCPHILGGVGKGPPPPIP*YFLRPK
Trigger: CTTTGGCCTGAGAAAATAGCATGGGATTGGAGGAGG...GGGCCCTTTCCCAACCCCTCCTAGGATGTGCGGGCAGTGTGCTGGCGCCTCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310585.4
CDS-3UTR GCA 90 bp CATCCTTTCTTCCACCTCCCGCTCAGAGAGCTCTGCGTGAATGGGCAGCCCGGCCTGACCTCTTTCCTTTaGATCACCCACCACTGTCCC +
Preference number: 4 (lower is better)
Translates to: HPFFHLPLRELCVNGQPGLTSFL*ITHHCP
Trigger: GGGACAGTGGTGGGTGATGCAAAGGAAAGAGGTCAG...GCCGGGCTGCCCATTCACGCAGAGCTCTCTGAGCGGGAGGTGGAAGAAAGGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310585.4
CDS-3UTR GCA 90 bp AACACCCTGGCTGGGGTGGGGCCCTGTACTGTAGCCTTGGCCTTTCATTCAGACATCCACCGAAGACCATaGTCGGAGCTTGGCTTCCGC +
Preference number: 4 (lower is better)
Translates to: NTLAGVGPCTVALAFHSDIHRRP*SELGFR
Trigger: GCGGAAGCCAAGCTCCGAGCATGGTCTTCGGTGGAT...GTCTGAATGAAAGGCCAAGGCTACAGTACAGGGCCCCACCCCAGCCAGGGTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR GCA 90 bp GTGGCCCTCTTGTGGCCCTCTCTAGAAGAACATGAAGTCCCAGCTCTGTGGCAAGCTGCCGTTCCCAGCTaGCCGTTAGTGGTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: VALLWPSLEEHEVPALWQAAVPS*PLVVGR
Trigger: TCTGCCCACCACTAACGGGCAGCTGGGAACGGCAGC...TTGCCACAGAGCTGGGACTTCATGTTCTTCTAGAGAGGGCCACAAGAGGGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000639617.1
CDS-3UTR GCA 90 bp TTCTTCCACCTCCCGCTCAGAGAGCTCTGCGTGAATGGGCAGCCCGGCTGGCTGCAGAACTTGGGATGCTaGTTGGACCCTAGAAAAGGC +
Preference number: 4 (lower is better)
Translates to: FFHLPLRELCVNGQPGWLQNLGC*LDPRKG
Trigger: GCCTTTTCTAGGGTCCAAGCAGCATCCCAAGTTCTG...CAGCCAGCCGGGCTGCCCATTCACGCAGAGCTCTCTGAGCGGGAGGTGGAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR CCA 90 bp AACATGAAGTCCCAGCTCTGTGGCAACCAGAGCCATCCTTTCTTCCACCTCCCGCATGCAGGGAGGACCTaGCCAGCGCAGCGATCTCCT +
Preference number: 4 (lower is better)
Translates to: NMKSQLCGNQSHPFFHLPHAGRT*PAQRSP
Trigger: AGGAGATCGCTGCGCTGGCCAGGTCCTCCCTGCATG...CGGGAGGTGGAAGAAAGGATGGCTCTGGTTGCCACAGAGCTGGGACTTCATGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000639617.1
CDS-3UTR CCA 90 bp AAAACACACAACGGAGAAGCGAGCGCTCCCAGGAGCCCTCTAGGCTGTGGAGCTGCTTGGCTTCCGCGATaGCAAACTGCTCAGCCACTC +
Preference number: 4 (lower is better)
Translates to: KTHNGEASAPRSPLGCGAAWLPR*QTAQPL
Trigger: GAGTGGCTGAGCAGTTTGCCATCGCGGAAGCCAAGC...AGCTCCACAGCCTAGAGGGCTCCTGGGAGCGCTCGCTTCTCCGTTGTGTGTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
CDS-3UTR CCA 90 bp ATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGCTGGGGACCATGCTCGGAGCTTaGCTTCCGCGATGGCAAACT +
Preference number: 4 (lower is better)
Translates to: MQDLPEASTTWALTPWLGTMLGA*LPRWQT
Trigger: AGTTTGCCATCGCGGAAGCCAAGCTCCGAGCATGGT...CCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp ATAAAAACGTACAGTCCAGTGACCTTGGAATGCAGGATCTGCCAGAGGCCTCCACCGGTGAACAGGTCCTaGAGGTGCGGCCCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: IKTYSPVTLECRICQRPPPVNRS*RCGPRG
Trigger: GCCCCTGGGGCCGCACCTCCAGGACCTGTTCACCGG...TGGAGGCCTCTGGCAGATCCTGCATTCCAAGGTCACTGGACTGTACGTTTTTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp TTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGGCCCTTAATTCTAAAGCCGGCTCCACGGAGCCCTaGCGCACAGGCCGGGAGAAC +
Preference number: 4 (lower is better)
Translates to: LPWALLPAKAYKALNSKAGSTEP*RTGREN
Trigger: GTTCTCCCGGCCTGTGCGCCAGGGCTCCGTGGAGCC...GGCTTTAGAATTAAGGGCCTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp TTAGGGGGCCAGGAAAAGGGTGGAGGGTACATGCTTTCATCATTCCAAAGCCTCCAGCACGAGCCCAGCTaGGCAGGGGCCCTTGAGGGA +
Preference number: 4 (lower is better)
Translates to: LGGQEKGGGYMLSSFQSLQHEPS*AGALEG
Trigger: TCCCTCAAGGGCCCCTGCCCAGCTGGGCTCGTGCTG...GAGGCTTTGGAATGATGAAAGCATGTACCCTCCACCCTTTTCCTGGCCCCCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000639617.1
CDS-3UTR CCA 90 bp ATTAACACCCTGGCTGGGGTGGGGCCCTGTACTGTAGCCTTGGCCTTTCATTCAAGAGCTCTGCGTGAATaGGCAGCCCGGCTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: INTLAGVGPCTVALAFHSRALRE*AARLAV
Trigger: CACAGCCAGCCGGGCTGCCCATTCACGCAGAGCTCT...TGAATGAAAGGCCAAGGCTACAGTACAGGGCCCCACCCCAGCCAGGGTGTTAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp CCAGCACACTGCCCGCACATCCTAGGAGGGGTTGGGAAAGGGCCCAGGCCCCATATGACTGTCACTCACTaGCACAATTCCTGCCTCTCA +
Preference number: 4 (lower is better)
Translates to: PAHCPHILGGVGKGPRPHMTVTH*HNSCLS
Trigger: TGAGAGGCAGGAATTGTGCCAGTGAGTGACAGTCAT...ATGGGGCCTGGGCCCTTTCCCAACCCCTCCTAGGATGTGCGGGCAGTGTGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp AGTCCAGTGACCTTGGAATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATTGGGCATTAACACCCTaGCTGGGGTGGGGCCCTGTA +
Preference number: 4 (lower is better)
Translates to: SPVTLECRICQRPPLRGHWALTP*LGWGPV
Trigger: TACAGGGCCCCACCCCAGCCAGGGTGTTAATGCCCA...ATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCATTCCAAGGTCACTGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp GATCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGCTGGGGTGGGGCCTCTCGTTCTTACCTTaGGCCCTCTTACCTGCCAAA +
Preference number: 4 (lower is better)
Translates to: DLPEASTTWALTPWLGWGLSFLP*ALLPAK
Trigger: TTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAG...GCCCCACCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp CCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGCTGGGGTGGGGCCCTGTAAATGCTTGTGCCCGTTaGCTCTCGTTCTTACCTTGG +
Preference number: 4 (lower is better)
Translates to: PEASTTWALTPWLGWGPVNACAR*LSFLPW
Trigger: CCAAGGTAAGAACGAGAGCCAACGGGCACAAGCATT...TACAGGGCCCCACCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp GGCCTCCACTACGTGGGCATTAACACCCTGGCTGGGGTGGGGCCCTGTACTGTATGGTCCTTCACCACCTaGGAAATACCATGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: GLHYVGINTLAGVGPCTVWSFTT*EIPCRE
Trigger: CTCCCTGCATGGTATTTCCCAGGTGGTGAAGGACCA...TACAGTACAGGGCCCCACCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340957.9
ENST00000383847.7
ENST00000639617.1
CDS-3UTR CCA 90 bp CCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGCTGGGGTGGGGCCCTGTAGGAAATACCTTTAGCTaGAGCAGCCGTCTCTATCCC +
Preference number: 4 (lower is better)
Translates to: PEASTTWALTPWLGWGPVGNTFS*SSRLYP
Trigger: GGGATAGAGACGGCTGCTCCAGCTAAAGGTATTTCC...TACAGGGCCCCACCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418281.5
CDS-3UTR CCA 90 bp TTCTCACTGCTGGGAGTGGACCATGCTTATGTCACCAGTATTGGCAGACTCATTGCCCCACTCCCGTCATaGCCTCCCCCGGGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: FSLLGVDHAYVTSIGRLIAPLPS*PPPGGQ
Trigger: CTGCCCTCCCGGGGGAGGCCATGACGGGAGTGGGGC...AATGAGTCTGCCAATACTGGTGACATAAGCATGGTCCACTCCCAGCAGTGAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR CCA 90 bp GCAGCAGTGACACGGAGACCACTGAGGTGCATGCACTCTGGGGGCCCCACTCCCGCAACTGAGAAGCAGTaGAACGAGAGGCATAGGATT +
Preference number: 4 (lower is better)
Translates to: AAVTRRPLRCMHSGGPTPATEKQ*NERHRI
Trigger: AATCCTATGCCTCTCGTTCCACTGCTTCTCAGTTGC...GGGAGTGGGGCCCCCAGAGTGCATGCACCTCAGTGGTCTCCGTGTCACTGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR CCA 90 bp ATTAACACCCTGGCTGGGGTGGGGCCCTGTACTGTAGCCTTGGCCTTTCATTCAGCGCCCCCAAGTAGCTaGGACTGCAGGCATGCACCA +
Preference number: 4 (lower is better)
Translates to: INTLAGVGPCTVALAFHSAPPSS*DCRHAP
Trigger: TGGTGCATGCCTGCAGTCCCAGCTACTTGGGGGCGC...TGAATGAAAGGCCAAGGCTACAGTACAGGGCCCCACCCCAGCCAGGGTGTTAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR TCA 90 bp TGCCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAATTCCAGGGCAGCAGGTaGGTCACTCGGCTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: CPLALVLTLGPLTCQSLQFQGSR*VTRLAP
Trigger: TGGAGCAAGCCGAGTGACTCACCTGCTGCCCTGGAA...TTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR TCA 90 bp CTCTTGTGGCCCTCTCTAGAAGAACATGAAGTCCCAGCTCTGTGGCAACCAGAGGGGCGAGTTGTAGAGTaGGTCCTGGGCCTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: LLWPSLEEHEVPALWQPEGRVVE*VLGLQW
Trigger: CCACTGGAGGCCCAGGACTCACTCTACAACTCGCCC...CTCTGGTTGCCACAGAGCTGGGACTTCATGTTCTTCTAGAGAGGGCCACAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR TCA 90 bp CCTTGGAATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGTGCCACTGCCAGGCATaGTGTGGGTCACTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: PWNAGSARGLHYVGINTLCHCQA*CGSLFL
Trigger: GAGGAACAGTGACCCACATCATGCCTGGCAGTGGCA...CAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCATTCCAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
CDS-3UTR TCA 90 bp TTAGGGGGCCAGGAAAAGGGTGGAGGGTACATGCTTTCATCATTCCAAAGCCTCCTGGGCAGGGGCCCTTaGGGGACGGCTCAACCCATA +
Preference number: 4 (lower is better)
Translates to: LGGQEKGGGYMLSSFQSLLGRGP*GTAQPI
Trigger: TATGGGTTGAGCCGTCCCTCAAGGGCCCCTGCCCAG...GAGGCTTTGGAATGATGAAAGCATGTACCCTCCACCCTTTTCCTGGCCCCCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000639617.1
CDS-3UTR TCA 90 bp CGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGGCCCGATGGAGAGGTGAATaGAGCACAGCACGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: RWLSFLPWALLPAKAYKARWRGE*STARAQ
Trigger: CTGGGCTCGTGCTGTGCTTCATTCACCTCTCCATCG...GGCCTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR TCA 90 bp ATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGCTGGGGAGAGACACTCCCTCATaGCTGTCACTCACTGGCACA +
Preference number: 4 (lower is better)
Translates to: MQDLPEASTTWALTPWLGRDTPS*LSLTGT
Trigger: TGTGCCAGTGAGTGACAGTCATGAGGGAGTGTCTCT...CCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR TCA 90 bp TCCAGTGACCTTGGAATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATTAACCTCTGGCAAGTCCTaGCTGTCCACCGAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: SSDLGMQDLPEASTTWALTSGKS*LSTEEG
Trigger: CCCTTCCTCGGTGGACAGTCAGGACTTGCCAGAGGT...TAATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCATTCCAAGGTCACTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383847.7
ENST00000639617.1
CDS-3UTR TCA 90 bp CCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGGATGGGAAGATGGGGGTaGCCGTTGTCCTCCTGGACT +
Preference number: 4 (lower is better)
Translates to: PVGSRSYLGPSYLPKPTRMGRWG*PLSSWT
Trigger: AGTCCAGGAGGACAACGGTCACCCCCATCTTCCCAT...CCTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR TCA 90 bp TCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGCTGGGGTGGGGCCCCTGGCTGACAATTTCTaGACCCCTGGTGATTATATG +
Preference number: 4 (lower is better)
Translates to: SARGLHYVGINTLAGVGPLADNF*TPGDYM
Trigger: CATATAATCACCAGGGGTTCAGAAATTGTCAGCCAG...GGGCCCCACCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR GCA 90 bp CTCTTGTGGCCCTCTCTAGAAGAACATGAAGTCCCAGCTCTGTGGCAACCAGAGGCCCTCAATGCCTCCTaGCCAGGTCGGCAGAAGTGG +
Preference number: 4 (lower is better)
Translates to: LLWPSLEEHEVPALWQPEALNAS*PGRQKW
Trigger: CCACTTCTGCCGACCTGGGCAGGAGGCATTGAGGGC...CTCTGGTTGCCACAGAGCTGGGACTTCATGTTCTTCTAGAGAGGGCCACAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310585.4
CDS-3UTR GCA 90 bp GCTTGTGCCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCGTGAGTCACTCGGCTTaGTCCAGCCCTTCCACTCAA +
Preference number: 4 (lower is better)
Translates to: ACARWLSFLPWALLPAKAVSHSA*SSPSTQ
Trigger: TTGAGTGGAAGGGCTGGAGCAAGCCGAGTGACTCAC...GGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGGCACAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR GCA 90 bp CCTTGGAATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGTCCGCGATGGCAAACTaGTCAGCCACTCCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: PWNAGSARGLHYVGINTLSAMAN*SATPAA
Trigger: TGCAGCAGGAGTGGCTGAGCAGTTTGCCATCGCGGA...CAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCATTCCAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR GCA 90 bp CTCTTGTGGCCCTCTCTAGAAGAACATGAAGTCCCAGCTCTGTGGCAACCAGAGTCAGAGGCTTGCCGCTaGCGTTCCCAGCTGCCCGTT +
Preference number: 4 (lower is better)
Translates to: LLWPSLEEHEVPALWQPESEACR*RSQLPV
Trigger: AACGGGCAGCTGGGAACGGCAGCGGCAAGCCTCTGA...CTCTGGTTGCCACAGAGCTGGGACTTCATGTTCTTCTAGAGAGGGCCACAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000639617.1
CDS-3UTR GCA 90 bp CAGGGGCCCTTGAGGGACGGCTCAACCCATAGGCTCCGGGAGGGCAGGAGCCAGCTCCAAACACTTTCATaGAAAACACACAACGGAGAA +
Preference number: 4 (lower is better)
Translates to: QGPLRDGSTHRLREGRSQLQTLS*KTHNGE
Trigger: TTCTCCGTTGTGTGTTTTGCATGAAAGTGTTTGGAG...CTGGCTCCTGCCCTCCCGGAGCCTATGGGTTGAGCCGTCCCTCAAGGGCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
CDS-3UTR GCA 90 bp GATCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGCTGGGGTGGGGCAGGGTGGAGGGTACATaGTTTCATCATTCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: DLPEASTTWALTPWLGWGRVEGT*FHHSKA
Trigger: GGCTTTGGAATGATGAAAGCATGTACCCTCCACCCT...GCCCCACCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR GCA 90 bp GGCCTCCAAAGCTGCTCCACTTCCAAAAAGTCATGGAGGCTTATGTCCAGCTCAGAGGCGCCAGCACACTaGCCGCACATCCTAGGAGGG +
Preference number: 4 (lower is better)
Translates to: GLQSCSTSKKSWRLMSSSEAPAH*PHILGG
Trigger: CCCTCCTAGGATGTGCGGGCAGTGTGCTGGCGCCTC...TGAGCTGGACATAAGCCTCCATGACTTTTTGGAAGTGGAGCAGCTTTGGAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR GCA 90 bp CCTTGGAATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGACCTGGGAAATACCATaGAGGGAGGACCTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: PWNAGSARGLHYVGINTLTWEIP*REDLAS
Trigger: GCTGGCCAGGTCCTCCCTGCATGGTATTTCCCAGGT...CAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCATTCCAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340957.9
ENST00000383847.7
ENST00000639617.1
CDS-3UTR GCA 90 bp TTCTTCCACCTCCCGCTCAGAGAGCTCTGCGTGAATGGGCAGCCCGGCTGGCTGACACTATCTTCTCACTaGTGGGAGTGGACCATGCTT +
Preference number: 4 (lower is better)
Translates to: FFHLPLRELCVNGQPGWLTLSSH*WEWTML
Trigger: AAGCATGGTCCACTCCCAGCAGTGAGAAGATAGTGT...CAGCCAGCCGGGCTGCCCATTCACGCAGAGCTCTCTGAGCGGGAGGTGGAAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR GCA 90 bp TTCCAGCTCCGGAAGGCCATCGAGGGCTCTGTCACAGCACAGGGTGTGAAAGTCAAAAGTGACTGGGGCTaGACAGCCACTCCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: FQLRKAIEGSVTAQGVKVKSDWG*TATPED
Trigger: GTCCTCAGGAGTGGCTGTGCAGCCCCAGTCACTTTT...GACTTTCACACCCTGTGCTGTGACAGAGCCCTCGATGGCCTTCCGGAGCTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR GCA 90 bp GGCCTCCACTACGTGGGCATTAACACCCTGGCTGGGGTGGGGCCCTGTACTGTAGTTGTCCTCCTGGACTaGAAGCTGCATCTCAACAGA +
Preference number: 4 (lower is better)
Translates to: GLHYVGINTLAGVGPCTVVVLLD*KLHLNR
Trigger: TCTGTTGAGATGCAGCTTGCAGTCCAGGAGGACAAC...TACAGTACAGGGCCCCACCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR CCA 90 bp TTCCAGCTCCGGAAGGCCATCGAGGGCTCTGTCACAGCACAGGGTGTGAAAGTCGTAGGCTTGGTCACGTaGTCCTTCACCACCTGGGAA +
Preference number: 4 (lower is better)
Translates to: FQLRKAIEGSVTAQGVKVVGLVT*SFTTWE
Trigger: TTCCCAGGTGGTGAAGGACCACGTGACCAAGCCTAC...GACTTTCACACCCTGTGCTGTGACAGAGCCCTCGATGGCCTTCCGGAGCTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR CCA 90 bp TATATAGAATGCTTGTGCCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCGGCCGGGAGAACCGGTaGCCGGTGAACAGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: YIECLCPLALVLTLGPLTGRENR*PVNRSW
Trigger: CCAGGACCTGTTCACCGGCCACCGGTTCTCCCGGCC...GGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGGCACAAGCATTCTATATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp ATTAACACCCTGGCTGGGGTGGGGCCCTGTACTGTAGCCTTGGCCTTTCATTCAAGGCACTTTCCCGGCTaGGGGGCAGTTTGGCGAGAA +
Preference number: 4 (lower is better)
Translates to: INTLAGVGPCTVALAFHSRHFPG*GAVWRE
Trigger: TTCTCGCCAAACTGCCCCCCAGCCGGGAAAGTGCCT...TGAATGAAAGGCCAAGGCTACAGTACAGGGCCCCACCCCAGCCAGGGTGTTAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp TCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGGCCCTTAATTCTAAAGGTCCTTGCAGGGGGCTaGCTCCTCCTCCGCGGGGGA +
Preference number: 4 (lower is better)
Translates to: SYLGPSYLPKPTRPLILKVLAGG*LLLRGG
Trigger: TCCCCCGCGGAGGAGGAGCCAGCCCCCTGCAAGGAC...CTTTAGAATTAAGGGCCTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000639617.1
CDS-3UTR CCA 90 bp CAGGAAAAGGGTGGAGGGTACATGCTTTCATCATTCCAAAGCCTCCCAGAGAAGCAGCACGAGCCCAGCTaGGCAGGGGCCCTTGAGGGA +
Preference number: 4 (lower is better)
Translates to: QEKGGGYMLSSFQSLPEKQHEPS*AGALEG
Trigger: TCCCTCAAGGGCCCCTGCCCAGCTGGGCTCGTGCTG...CTTCTCTGGGAGGCTTTGGAATGATGAAAGCATGTACCCTCCACCCTTTTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000639617.1
CDS-3UTR CCA 90 bp ATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGCTGGGGGGGCCAGGAAAAGGGTaGAGGGTACATGCTTTCATC +
Preference number: 4 (lower is better)
Translates to: MQDLPEASTTWALTPWLGGPGKG*RVHAFI
Trigger: GATGAAAGCATGTACCCTCCACCCTTTTCCTGGCCC...CCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCAT
58% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp ATTAGGGGGCCAGGAAAAGGGTGGAGGGTACATGCTTTCATCATTCCAAAGCCTTCCCGGCCACCCCTGTaGCCCTCTTGTGGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: IRGPGKGWRVHAFIIPKPSRPPL*PSCGPL
Trigger: GAGAGGGCCACAAGAGGGCCACAGGGGTGGCCGGGA...AGGCTTTGGAATGATGAAAGCATGTACCCTCCACCCTTTTCCTGGCCCCCTAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000639617.1
CDS-3UTR CCA 90 bp CGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGGCCGAGGCCTCCACTACGTaGGCATTAACACCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: RWLSFLPWALLPAKAYKAEASTT*ALTPWL
Trigger: CAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCCTC...GGCCTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp GTGGCCCTCTTGTGGCCCTCTCTAGAAGAACATGAAGTCCCAGCTCTGTGGCAAGCCTCGGCCAGCTGTTaGTCCCCAGAAATGCCTGAC +
Preference number: 4 (lower is better)
Translates to: VALLWPSLEEHEVPALWQASASC*SPEMPD
Trigger: GTCAGGCATTTCTGGGGACCAACAGCTGGCCGAGGC...TTGCCACAGAGCTGGGACTTCATGTTCTTCTAGAGAGGGCCACAAGAGGGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340957.9
ENST00000418281.5
CDS-3UTR CCA 90 bp TGTGAGGCGCCAGCACACTGCCCGCACATCCTAGGAGGGGTTGGGAAAGGGCCCCAAGTTCCTGAGGCCTaGACACAGAAACATTCTCAT +
Preference number: 4 (lower is better)
Translates to: CEAPAHCPHILGGVGKGPQVPEA*TQKHSH
Trigger: ATGAGAATGTTTCTGTGTCCAGGCCTCAGGAACTTG...GGGCCCTTTCCCAACCCCTCCTAGGATGTGCGGGCAGTGTGCTGGCGCCTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR CCA 90 bp CGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGGCCGCTTCAGGCCAAGACTaGAATGCCAGAGCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: RWLSFLPWALLPAKAYKAASGQD*NARAGE
Trigger: CTCCCCTGCTCTGGCATTCCAGTCTTGGCCTGAAGC...GGCCTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR CCA 90 bp CCTTGGAATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGCATTCTACCCGCCTTaGCCTCCCAGAGTGCTAGGA +
Preference number: 4 (lower is better)
Translates to: PWNAGSARGLHYVGINTLAFYPP*PPRVLG
Trigger: TCCTAGCACTCTGGGAGGCCAAGGCGGGTAGAATGC...CAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCATTCCAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR TCA 90 bp CCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGGAGGCAGGGCAGGAAATaGAGAACCACGAGTGAGACC +
Preference number: 4 (lower is better)
Translates to: PVGSRSYLGPSYLPKPTRRQGRK*RTTSET
Trigger: GGTCTCACTCGTGGTTCTTCATTTCCTGCCCTGCCT...CCTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310585.4
CDS-3UTR TCA 90 bp AACATGAAGTCCCAGCTCTGTGGCAACCAGAGCCATCCTTTCTTCCACCTCCCGCCCTCCAGGTGGGGGTaGTTCTATCAAGCACTGCAC +
Preference number: 4 (lower is better)
Translates to: NMKSQLCGNQSHPFFHLPPSRWG*FYQALH
Trigger: GTGCAGTGCTTGATAGAATCACCCCCACCTGGAGGG...CGGGAGGTGGAAGAAAGGATGGCTCTGGTTGCCACAGAGCTGGGACTTCATGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
CDS-3UTR TCA 90 bp TCCAGTGACCTTGGAATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATTACGATGGAGAGGTGAATaGAGCACAGCACGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: SSDLGMQDLPEASTTWALRWRGE*STARAQ
Trigger: CTGGGCTCGTGCTGTGCTTCATTCACCTCTCCATCG...TAATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCATTCCAAGGTCACTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR TCA 90 bp GTGGCCCTCTTGTGGCCCTCTCTAGAAGAACATGAAGTCCCAGCTCTGTGGCAACGATGGAGAGGTGAATaGAGCACAGCACGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: VALLWPSLEEHEVPALWQRWRGE*STARAQ
Trigger: CTGGGCTCGTGCTGTGCTTCATTCACCTCTCCATCG...TTGCCACAGAGCTGGGACTTCATGTTCTTCTAGAGAGGGCCACAAGAGGGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR TCA 90 bp GCCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGGAGACGATGGAGAGGTaGATGAAGCACAGCACGAGC +
Preference number: 4 (lower is better)
Translates to: ARWLSFLPWALLPAKAYKETMER*MKHSTS
Trigger: GCTCGTGCTGTGCTTCATTCACCTCTCCATCGTCTC...CTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR TCA 90 bp GGCCTCCACTACGTGGGCATTAACACCCTGGCTGGGGTGGGGCCCTGTACTGTAAAACGTACAGTCCAGTaGCCTTGGAATGCAGGATCT +
Preference number: 4 (lower is better)
Translates to: GLHYVGINTLAGVGPCTVKRTVQ*PWNAGS
Trigger: AGATCCTGCATTCCAAGGTCACTGGACTGTACGTTT...TACAGTACAGGGCCCCACCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR TCA 90 bp CATCCTTTCTTCCACCTCCCGCTCAGAGAGCTCTGCGTGAATGGGCAGCCCGGCAATTCCAGGAACTGCTaGGTCAGGAGAGCGTTTTTC +
Preference number: 4 (lower is better)
Translates to: HPFFHLPLRELCVNGQPGNSRNC*VRRAFF
Trigger: GAAAAACGCTCTCCTGACTCAGCAGTTCCTGGAATT...GCCGGGCTGCCCATTCACGCAGAGCTCTCTGAGCGGGAGGTGGAAGAAAGGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR GCA 90 bp TTCTTCCACCTCCCGCTCAGAGAGCTCTGCGTGAATGGGCAGCCCGGCTGGCTGATTCTCCCCTGGCTTTaGTTGCCCATATCTGTTGAT +
Preference number: 4 (lower is better)
Translates to: FFHLPLRELCVNGQPGWLILPWL*LPISVD
Trigger: ATCAACAGATATGGGCAAGCAAAGCCAGGGGAGAAT...CAGCCAGCCGGGCTGCCCATTCACGCAGAGCTCTCTGAGCGGGAGGTGGAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310585.4
CDS-3UTR GCA 90 bp CTTGGAATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGGTGAGTCACTCGGCTTaGTCCAGCCCTTCCACTCAA +
Preference number: 4 (lower is better)
Translates to: LGMQDLPEASTTWALTPWVSHSA*SSPSTQ
Trigger: TTGAGTGGAAGGGCTGGAGCAAGCCGAGTGACTCAC...CCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCATTCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR GCA 90 bp CGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGGCCCTCAGCCACTCCTGCTaGAAAGCGAGCCTCTTGTTC +
Preference number: 4 (lower is better)
Translates to: RWLSFLPWALLPAKAYKALSHSC*KASLLF
Trigger: GAACAAGAGGCTCGCTTTGCAGCAGGAGTGGCTGAG...GGCCTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR GCA 90 bp AGTCCAGTGACCTTGGAATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATCTCAGCCACTCCTGCTaGAAAGCGAGCCTCTTGTTC +
Preference number: 4 (lower is better)
Translates to: SPVTLECRICQRPPLRGHLSHSC*KASLLF
Trigger: GAACAAGAGGCTCGCTTTGCAGCAGGAGTGGCTGAG...ATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCATTCCAAGGTCACTGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR GCA 90 bp TGCCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAATCCGCGATGGCAAACTaGTCAGCCACTCCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: CPLALVLTLGPLTCQSLQSAMAN*SATPAA
Trigger: TGCAGCAGGAGTGGCTGAGCAGTTTGCCATCGCGGA...TTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR GCA 90 bp TTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGGCCCTTAATTCTAAAGCCGTGGCTGGCAGTCCTTaGAGGGGGCTGGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LPWALLPAKAYKALNSKAVAGSP*RGLAPP
Trigger: AGGAGGAGCCAGCCCCCTGCAAGGACTGCCAGCCAC...GGCTTTAGAATTAAGGGCCTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000639617.1
CDS-3UTR GCA 90 bp CAGGAAAAGGGTGGAGGGTACATGCTTTCATCATTCCAAAGCCTCCCAGAGAAGGCCAGGTCAGAGGCTTaGCGCTGCCGTTCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: QEKGGGYMLSSFQSLPEKARSEA*RCRSQL
Trigger: CAGCTGGGAACGGCAGCGGCAAGCCTCTGACCTGGC...CTTCTCTGGGAGGCTTTGGAATGATGAAAGCATGTACCCTCCACCCTTTTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
CDS-3UTR GCA 90 bp TTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGGCCCTTAATTCTAAAGCCGCAGCAGCCGGGGGATaGATGCCACTGCCAGGCATG +
Preference number: 4 (lower is better)
Translates to: LPWALLPAKAYKALNSKAAAAGG*MPLPGM
Trigger: CATGCCTGGCAGTGGCATGCATCCCCCGGCTGCTGC...GGCTTTAGAATTAAGGGCCTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
CDS-3UTR GCA 90 bp TTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGGCCCTTAATTCTAAAGCCGAGGCGCCAGCACACTaGCCGCACATCCTAGGAGGG +
Preference number: 4 (lower is better)
Translates to: LPWALLPAKAYKALNSKAEAPAH*PHILGG
Trigger: CCCTCCTAGGATGTGCGGGCAGTGTGCTGGCGCCTC...GGCTTTAGAATTAAGGGCCTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR GCA 90 bp GCCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGTTGGGCCCTCTTACCTaGCAAAGCCTACAAGGCCCT +
Preference number: 4 (lower is better)
Translates to: ARWLSFLPWALLPAKAYKLGPLT*QSLQGP
Trigger: AGGGCCTTGTAGGCTTTGGCAGGTAAGAGGGCCCAA...CTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR GCA 90 bp CTTGGAATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGTTGGGCCCTCTTACCTaGCAAAGCCTACAAGGCCCT +
Preference number: 4 (lower is better)
Translates to: LGMQDLPEASTTWALTPWLGPLT*QSLQGP
Trigger: AGGGCCTTGTAGGCTTTGGCAGGTAAGAGGGCCCAA...CCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCATTCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR GCA 90 bp TGTGAGGCGCCAGCACACTGCCCGCACATCCTAGGAGGGGTTGGGAAAGGGCCCTATATAGAATGCTTGTaGCCGTTGGCTCTCGTTCTT +
Preference number: 4 (lower is better)
Translates to: CEAPAHCPHILGGVGKGPYIECL*PLALVL
Trigger: AAGAACGAGAGCCAACGGGCACAAGCATTCTATATA...GGGCCCTTTCCCAACCCCTCCTAGGATGTGCGGGCAGTGTGCTGGCGCCTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR GCA 90 bp ATGAGCCACTTATATATAGAATGCTTGTGCCCGTTGGCTCTCGTTCTTACCTTGCCAGGCACGCTAGCCTaGGCTCGGGGCGCGGGCCAT +
Preference number: 4 (lower is better)
Translates to: MSHLYIECLCPLALVLTLPGTLA*ARGAGH
Trigger: ATGGCCCGCGCCCCGAGCGCAGGCTAGCGTGCCTGG...CAAGGTAAGAACGAGAGCCAACGGGCACAAGCATTCTATATATAAGTGGCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340957.9
ENST00000418281.5
CDS-3UTR GCA 90 bp TGCATCTTTCATTCCTTCTGCCTTCGGAAGGCAGGAGGCAGCTACAGCTGGAGGACCTGGGAAATACCATaGAGGGAGGACCTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: CIFHSFCLRKAGGSYSWRTWEIP*REDLAS
Trigger: GCTGGCCAGGTCCTCCCTGCATGGTATTTCCCAGGT...CCTCCAGCTGTAGCTGCCTCCTGCCTTCCGAAGGCAGAAGGAATGAAAGATGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR GCA 90 bp CACACTGCAGACTCACACTATCTTCTCACTGCTGGGAGTGGACCATGCTTATGTCGGAGACCACTGAGGTaGATGCACTCTGGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: HTADSHYLLTAGSGPCLCRRPLR*MHSGGP
Trigger: GGGGCCCCCAGAGTGCATGCACCTCAGTGGTCTCCG...ACATAAGCATGGTCCACTCCCAGCAGTGAGAAGATAGTGTGAGTCTGCAGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR CCA 90 bp TCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGCTGGGGTGGGGCCCTTTCCTGTTTCTTGTTaGTCTCCCTCACTGGTCTTT +
Preference number: 4 (lower is better)
Translates to: SARGLHYVGINTLAGVGPFPVSC*SPSLVF
Trigger: AAAGACCAGTGAGGGAGACCAACAAGAAACAGGAAA...GGGCCCCACCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310585.4
CDS-3UTR CCA 90 bp AGTCCAGTGACCTTGGAATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATCCTCCCAGAAAGCAATaGAGATTCAGACAGGCCCCG +
Preference number: 4 (lower is better)
Translates to: SPVTLECRICQRPPLRGHPPRKQ*RFRQAP
Trigger: CGGGGCCTGTCTGAATCTCCATTGCTTTCTGGGAGG...ATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCATTCCAAGGTCACTGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310585.4
CDS-3UTR CCA 90 bp GCTTGTGCCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCAAGTGGCCAGAAACATaGGAGGGGCTGCATACCATG +
Preference number: 4 (lower is better)
Translates to: ACARWLSFLPWALLPAKAKWPET*EGLHTM
Trigger: CATGGTATGCAGCCCCTCCCATGTTTCTGGCCACTT...GGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGGCACAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310585.4
CDS-3UTR CCA 90 bp AGTCCAGTGACCTTGGAATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATGTAGGCTTGGTCACGTaGTCCTTCACCACCTGGGAA +
Preference number: 4 (lower is better)
Translates to: SPVTLECRICQRPPLRGHVGLVT*SFTTWE
Trigger: TTCCCAGGTGGTGAAGGACCACGTGACCAAGCCTAC...ATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCATTCCAAGGTCACTGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp AACATGAAGTCCCAGCTCTGTGGCAACCAGAGCCATCCTTTCTTCCACCTCCCGGCTTGGCTTCCGCGATaGCAAACTGCTCAGCCACTC +
Preference number: 4 (lower is better)
Translates to: NMKSQLCGNQSHPFFHLPAWLPR*QTAQPL
Trigger: GAGTGGCTGAGCAGTTTGCCATCGCGGAAGCCAAGC...CGGGAGGTGGAAGAAAGGATGGCTCTGGTTGCCACAGAGCTGGGACTTCATGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp CTTTCATTCCTTCTGCCTTCGGAAGGCAGGAGGCAGCTACAGCTGGAGGCTGCAACCATGCTCGGAGCTTaGCTTCCGCGATGGCAAACT +
Preference number: 4 (lower is better)
Translates to: LSFLLPSEGRRQLQLEAATMLGA*LPRWQT
Trigger: AGTTTGCCATCGCGGAAGCCAAGCTCCGAGCATGGT...TGCAGCCTCCAGCTGTAGCTGCCTCCTGCCTTCCGAAGGCAGAAGGAATGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR CCA 90 bp TCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGGCCCTTAATTCTAAAGGGCCGGGAGAACCGGTaGCCGGTGAACAGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: SYLGPSYLPKPTRPLILKGRENR*PVNRSW
Trigger: CCAGGACCTGTTCACCGGCCACCGGTTCTCCCGGCC...CTTTAGAATTAAGGGCCTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp ATGAGCCACTTATATATAGAATGCTTGTGCCCGTTGGCTCTCGTTCTTACCTTGTCATCGCCCAGCAGCTaGGAGGCCAGCCGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: MSHLYIECLCPLALVLTLSSPSS*EASRAG
Trigger: CCCGGCCCGGCTGGCCTCCCAGCTGCTGGGCGATGA...CAAGGTAAGAACGAGAGCCAACGGGCACAAGCATTCTATATATAAGTGGCTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp CACACTGCAGACTCACACTATCTTCTCACTGCTGGGAGTGGACCATGCTTATGTGGTGGGCAGAGTGGCTaGCAGTCCTTGCAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: HTADSHYLLTAGSGPCLCGGQSG*QSLQGA
Trigger: AGCCCCCTGCAAGGACTGCCAGCCACTCTGCCCACC...ACATAAGCATGGTCCACTCCCAGCAGTGAGAAGATAGTGTGAGTCTGCAGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR CCA 90 bp CCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGGCTGCCAGGCATGATGTaGGTCACTGTTCCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: PVGSRSYLGPSYLPKPTRLPGMM*VTVPLA
Trigger: AGCCAGAGGAACAGTGACCCACATCATGCCTGGCAG...CCTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
CDS-3UTR CCA 90 bp TCCAGTGACCTTGGAATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATTAGAGGCCTCCACTACGTaGGCATTAACACCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SSDLGMQDLPEASTTWALEASTT*ALTPWL
Trigger: CAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCCTC...TAATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCATTCCAAGGTCACTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp TGCATCTTTCATTCCTTCTGCCTTCGGAAGGCAGGAGGCAGCTACAGCTGGAGGGCCTCGGCCAGCTGTTaGTCCCCAGAAATGCTACCA +
Preference number: 4 (lower is better)
Translates to: CIFHSFCLRKAGGSYSWRASASC*SPEMLP
Trigger: TGGTAGCATTTCTGGGGACCAACAGCTGGCCGAGGC...CCTCCAGCTGTAGCTGCCTCCTGCCTTCCGAAGGCAGAAGGAATGAAAGATGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR CCA 90 bp CTCTCCGGTGTGATGAAAAGTGACTGGGGCTGCACAGCCACTCCTGAGGACCCGACTTGGGATGCTGCTTaGACCCTAGAAAAGGCAGAC +
Preference number: 4 (lower is better)
Translates to: LSGVMKSDWGCTATPEDPTWDAA*TLEKAD
Trigger: GTCTGCCTTTTCTAGGGTCCAAGCAGCATCCCAAGT...CGGGTCCTCAGGAGTGGCTGTGCAGCCCCAGTCACTTTTCATCACACCGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR CCA 90 bp TGTGAGGCGCCAGCACACTGCCCGCACATCCTAGGAGGGGTTGGGAAAGGGCCCAAGCATAAGGAGAACTaGCTGACAATTTCTGAACCC +
Preference number: 4 (lower is better)
Translates to: CEAPAHCPHILGGVGKGPKHKEN*LTISEP
Trigger: GGGTTCAGAAATTGTCAGCCAGTTCTCCTTATGCTT...GGGCCCTTTCCCAACCCCTCCTAGGATGTGCGGGCAGTGTGCTGGCGCCTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR TCA 90 bp ATAAAAACGTACAGTCCAGTGACCTTGGAATGCAGGATCTGCCAGAGGCCTCCATTCCACTCAATGAGGTaGGCCACTCGGCCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: IKTYSPVTLECRICQRPPFHSMR*ATRPWA
Trigger: GGCCCAGGGCCGAGTGGCTCACCTCATTGAGTGGAA...TGGAGGCCTCTGGCAGATCCTGCATTCCAAGGTCACTGGACTGTACGTTTTTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR TCA 90 bp CAGGAAAAGGGTGGAGGGTACATGCTTTCATCATTCCAAAGCCTCCCAGAGAAGTGGGGACACGGTCTGTaGGCAGTCGCTCTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: QEKGGGYMLSSFQSLPEKWGHGL*AVALRL
Trigger: GAGCCTGAGAGCGACTGCTCACAGACCGTGTCCCCA...CTTCTCTGGGAGGCTTTGGAATGATGAAAGCATGTACCCTCCACCCTTTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000639617.1
CDS-3UTR TCA 90 bp TATATAGAATGCTTGTGCCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGGGGACACGGTCTGTaGGCAGTCGCTCTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: YIECLCPLALVLTLGPLTWGHGL*AVALRL
Trigger: GAGCCTGAGAGCGACTGCTCACAGACCGTGTCCCCA...GGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGGCACAAGCATTCTATATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR TCA 90 bp ATAAAAACGTACAGTCCAGTGACCTTGGAATGCAGGATCTGCCAGAGGCCTCCACTCTGCTGGGAGCCTTaGGCCCACACTTGGGCACAG +
Preference number: 4 (lower is better)
Translates to: IKTYSPVTLECRICQRPPLCWEP*AHTWAQ
Trigger: CTGTGCCCAAGTGTGGGCTCAAGGCTCCCAGCAGAG...TGGAGGCCTCTGGCAGATCCTGCATTCCAAGGTCACTGGACTGTACGTTTTTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
CDS-3UTR TCA 90 bp TTCTTCCACCTCCCGCTCAGAGAGCTCTGCGTGAATGGGCAGCCCGGCTGGCTGGGCATTTTAAGAACATaGACATCACTGTCTGCCACA +
Preference number: 4 (lower is better)
Translates to: FFHLPLRELCVNGQPGWLGILRT*TSLSAT
Trigger: TGTGGCAGACAGTGATGTTCATGTTCTTAAAATGCC...CAGCCAGCCGGGCTGCCCATTCACGCAGAGCTCTCTGAGCGGGAGGTGGAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
CDS-3UTR TCA 90 bp CTTGGAATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGAGAGACACTCCCTCATaGCTGTCACTCACTGGCACA +
Preference number: 4 (lower is better)
Translates to: LGMQDLPEASTTWALTPWRDTPS*LSLTGT
Trigger: TGTGCCAGTGAGTGACAGTCATGAGGGAGTGTCTCT...CCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCATTCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR TCA 90 bp AGCCATCCTTTCTTCCACCTCCCGCTCAGAGAGCTCTGCGTGAATGGGCAGCCCAAACGTACAGTCCAGTaGCCTTGGAATGCAGGATCT +
Preference number: 4 (lower is better)
Translates to: SHPFFHLPLRELCVNGQPKRTVQ*PWNAGS
Trigger: AGATCCTGCATTCCAAGGTCACTGGACTGTACGTTT...GGGCTGCCCATTCACGCAGAGCTCTCTGAGCGGGAGGTGGAAGAAAGGATGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR TCA 90 bp CACACTGCAGACTCACACTATCTTCTCACTGCTGGGAGTGGACCATGCTTATGTAGCCGTCTCTATCCCTaGGCCTCGGCCAGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: HTADSHYLLTAGSGPCLCSRLYP*ASASCW
Trigger: CCAACAGCTGGCCGAGGCTCAGGGATAGAGACGGCT...ACATAAGCATGGTCCACTCCCAGCAGTGAGAAGATAGTGTGAGTCTGCAGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR TCA 90 bp GCCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGACTCTGCGACTTGTCTaGCAAGTCCATCGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: ARWLSFLPWALLPAKAYKTLRLV*QVHRPP
Trigger: TGGAGGACGATGGACTTGTCAGACAAGTCGCAGAGT...CTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383847.7
ENST00000639617.1
CDS-3UTR TCA 90 bp GGCCTCCAAAGCTGCTCCACTTCCAAAAAGTCATGGAGGCTTATGTCCAGCTCATCTCGAGGCCAGTCCTaGGGTCAGCCAAACTCACCC +
Preference number: 4 (lower is better)
Translates to: GLQSCSTSKKSWRLMSSSSRGQS*GQPNSP
Trigger: GGGTGAGTTTGGCTGACCTCAGGACTGGCCTCGAGA...TGAGCTGGACATAAGCCTCCATGACTTTTTGGAAGTGGAGCAGCTTTGGAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR GCA 90 bp CCTTGGAATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGCACCTGCAAAGTCCCTaGTCCTACCCTGTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: PWNAGSARGLHYVGINTLHLQSP*SYPVLS
Trigger: AGAAAGGACAGGGTAGGAGCAGGGACTTTGCAGGTG...CAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCATTCCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310585.4
CDS-3UTR GCA 90 bp ATAAAAACGTACAGTCCAGTGACCTTGGAATGCAGGATCTGCCAGAGGCCTCCAGCTGCCGTTCCCAGCTaGCCGTTAGTGGTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: IKTYSPVTLECRICQRPPAAVPS*PLVVGR
Trigger: TCTGCCCACCACTAACGGGCAGCTGGGAACGGCAGC...TGGAGGCCTCTGGCAGATCCTGCATTCCAAGGTCACTGGACTGTACGTTTTTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000639617.1
CDS-3UTR GCA 90 bp TATATAGAATGCTTGTGCCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTCAGAGGCTTGCCGCTaGCGTTCCCAGCTGCCCGTT +
Preference number: 4 (lower is better)
Translates to: YIECLCPLALVLTLGPLTSEACR*RSQLPV
Trigger: AACGGGCAGCTGGGAACGGCAGCGGCAAGCCTCTGA...GGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGGCACAAGCATTCTATATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000639617.1
CDS-3UTR GCA 90 bp GCTTGTGCCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCATGAACATCACTGTCTaGCACAGCTGTAGCCATGCC +
Preference number: 4 (lower is better)
Translates to: ACARWLSFLPWALLPAKAMNITV*HSCSHA
Trigger: GGCATGGCTACAGCTGTGGCAGACAGTGATGTTCAT...GGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGGCACAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
CDS-3UTR GCA 90 bp CACCACTATGTCTGGCTTTTTGTGGAGACAGGGTTTCGCATATTGCAGGCTAGTCCGCTCAGAGAGCTCTaGGTGAATGGGCAGCCCGGC +
Preference number: 4 (lower is better)
Translates to: HHYVWLFVETGFRILQASPLREL*VNGQPG
Trigger: GCCGGGCTGCCCATTCACGCAGAGCTCTCTGAGCGG...ACTAGCCTGCAATATGCGAAACCCTGTCTCCACAAAAAGCCAGACATAGTGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR GCA 90 bp TCCAGTGACCTTGGAATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATTATTGGGCCCTCTTACCTaGCAAAGCCTACAAGGCCCT +
Preference number: 4 (lower is better)
Translates to: SSDLGMQDLPEASTTWALLGPLT*QSLQGP
Trigger: AGGGCCTTGTAGGCTTTGGCAGGTAAGAGGGCCCAA...TAATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCATTCCAAGGTCACTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR GCA 90 bp CCTTTCTTCCACCTCCCGCTCAGAGAGCTCTGCGTGAATGGGCAGCCCGGCTGGTATATAGAATGCTTGTaGCCGTTGGCTCTCGTTCTT +
Preference number: 4 (lower is better)
Translates to: PFFHLPLRELCVNGQPGWYIECL*PLALVL
Trigger: AAGAACGAGAGCCAACGGGCACAAGCATTCTATATA...CCAGCCGGGCTGCCCATTCACGCAGAGCTCTCTGAGCGGGAGGTGGAAGAAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp ATAAAAACGTACAGTCCAGTGACCTTGGAATGCAGGATCTGCCAGAGGCCTCCACCAGGTCGGCAGAAGTaGTGTTCCCCCAGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: IKTYSPVTLECRICQRPPPGRQK*CSPSLL
Trigger: GAGGAGGCTGGGGGAACACCACTTCTGCCGACCTGG...TGGAGGCCTCTGGCAGATCCTGCATTCCAAGGTCACTGGACTGTACGTTTTTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000310585.4
CDS-3UTR CCA 90 bp CGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGGCCATCCATGTGAACCTTTaGGTGGGAGAAGGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: RWLSFLPWALLPAKAYKAIHVNL*VGEGAE
Trigger: CTCAGCCCCTTCTCCCACCCAAAGGTTCACATGGAT...GGCCTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310585.4
CDS-3UTR CCA 90 bp TGCCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGTAGGCTTGGTCACGTaGTCCTTCACCACCTGGGAA +
Preference number: 4 (lower is better)
Translates to: CPLALVLTLGPLTCQSLQVGLVT*SFTTWE
Trigger: TTCCCAGGTGGTGAAGGACCACGTGACCAAGCCTAC...TTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp CTCTTGTGGCCCTCTCTAGAAGAACATGAAGTCCCAGCTCTGTGGCAACCAGAGGCTTGGCTTCCGCGATaGCAAACTGCTCAGCCACTC +
Preference number: 4 (lower is better)
Translates to: LLWPSLEEHEVPALWQPEAWLPR*QTAQPL
Trigger: GAGTGGCTGAGCAGTTTGCCATCGCGGAAGCCAAGC...CTCTGGTTGCCACAGAGCTGGGACTTCATGTTCTTCTAGAGAGGGCCACAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp GTGGCCCTCTTGTGGCCCTCTCTAGAAGAACATGAAGTCCCAGCTCTGTGGCAAACCATGCTCGGAGCTTaGCTTCCGCGATGGCAAACT +
Preference number: 4 (lower is better)
Translates to: VALLWPSLEEHEVPALWQTMLGA*LPRWQT
Trigger: AGTTTGCCATCGCGGAAGCCAAGCTCCGAGCATGGT...TTGCCACAGAGCTGGGACTTCATGTTCTTCTAGAGAGGGCCACAAGAGGGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp TCCAGTGACCTTGGAATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATTAACCATGCTCGGAGCTTaGCTTCCGCGATGGCAAACT +
Preference number: 4 (lower is better)
Translates to: SSDLGMQDLPEASTTWALTMLGA*LPRWQT
Trigger: AGTTTGCCATCGCGGAAGCCAAGCTCCGAGCATGGT...TAATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCATTCCAAGGTCACTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp CACAACCATAAAAACGTACAGTCCAGTGACCTTGGAATGCAGGATCTGCCAGAGGGTGGGCAGAGTGGCTaGCAGTCCTTGCAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: HNHKNVQSSDLGMQDLPEGGQSG*QSLQGA
Trigger: AGCCCCCTGCAAGGACTGCCAGCCACTCTGCCCACC...CTCTGGCAGATCCTGCATTCCAAGGTCACTGGACTGTACGTTTTTATGGTTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000639617.1
CDS-3UTR CCA 90 bp ATTAGGGGGCCAGGAAAAGGGTGGAGGGTACATGCTTTCATCATTCCAAAGCCTCATCCTAGGAGGGGTTaGGAAAGGGCCCAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: IRGPGKGWRVHAFIIPKPHPRRG*ERAQAP
Trigger: TGGGGCCTGGGCCCTTTCCCAACCCCTCCTAGGATG...AGGCTTTGGAATGATGAAAGCATGTACCCTCCACCCTTTTCCTGGCCCCCTAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000639617.1
CDS-3UTR CCA 90 bp CAGGAAAAGGGTGGAGGGTACATGCTTTCATCATTCCAAAGCCTCCCAGAGAAGCATCCTAGGAGGGGTTaGGAAAGGGCCCAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: QEKGGGYMLSSFQSLPEKHPRRG*ERAQAP
Trigger: TGGGGCCTGGGCCCTTTCCCAACCCCTCCTAGGATG...CTTCTCTGGGAGGCTTTGGAATGATGAAAGCATGTACCCTCCACCCTTTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000639617.1
CDS-3UTR CCA 90 bp CCTTGGAATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGAAGTCCCAGCTCTGTaGCAACCAGAGCCATCCTTT +
Preference number: 4 (lower is better)
Translates to: PWNAGSARGLHYVGINTLEVPAL*QPEPSF
Trigger: AAAGGATGGCTCTGGTTGCCACAGAGCTGGGACTTC...CAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCATTCCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp CCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGGGAAGTCCCAGCTCTGTaGCAACCAGAGCCATCCTTT +
Preference number: 4 (lower is better)
Translates to: PVGSRSYLGPSYLPKPTREVPAL*QPEPSF
Trigger: AAAGGATGGCTCTGGTTGCCACAGAGCTGGGACTTC...CCTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp GCCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGCCTGTGGCCCTCTTGTaGCCCTCTCTAGAAGAACAT +
Preference number: 4 (lower is better)
Translates to: ARWLSFLPWALLPAKAYKPVALL*PSLEEH
Trigger: ATGTTCTTCTAGAGAGGGCCACAAGAGGGCCACAGG...CTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp AAAACACACAACGGAGAAGCGAGCGCTCCCAGGAGCCCTCTAGGCTGTGGAGCTCTCTCGTTCTTACCTTaGGCCCTCTTACCTGCCAAA +
Preference number: 4 (lower is better)
Translates to: KTHNGEASAPRSPLGCGALSFLP*ALLPAK
Trigger: TTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAG...AGCTCCACAGCCTAGAGGGCTCCTGGGAGCGCTCGCTTCTCCGTTGTGTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
CDS-3UTR CCA 90 bp TTAGGGGGCCAGGAAAAGGGTGGAGGGTACATGCTTTCATCATTCCAAAGCCTCGCCTCGGCCAGCTGTTaGTCCCCAGAAATGCCTGAC +
Preference number: 4 (lower is better)
Translates to: LGGQEKGGGYMLSSFQSLASASC*SPEMPD
Trigger: GTCAGGCATTTCTGGGGACCAACAGCTGGCCGAGGC...GAGGCTTTGGAATGATGAAAGCATGTACCCTCCACCCTTTTCCTGGCCCCCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000340957.9
CDS-3UTR CCA 90 bp AACACCCTGGCTGGGGTGGGGCCCTGTACTGTAGCCTTGGCCTTTCATTCAGACTCCAACATTCACCTCTaGCAAGTCCTGACTGTCCAC +
Preference number: 4 (lower is better)
Translates to: NTLAGVGPCTVALAFHSDSNIHL*QVLTVH
Trigger: GTGGACAGTCAGGACTTGCCAGAGGTGAATGTTGGA...GTCTGAATGAAAGGCCAAGGCTACAGTACAGGGCCCCACCCCAGCCAGGGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383847.7
ENST00000639617.1
CDS-3UTR CCA 90 bp TTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGGCCCTTAATTCTAAAGCCGAGGTGCATGCACTCTaGGGGCCCCACTCCCGTCAT +
Preference number: 4 (lower is better)
Translates to: LPWALLPAKAYKALNSKAEVHAL*GPHSRH
Trigger: ATGACGGGAGTGGGGCCCCCAGAGTGCATGCACCTC...GGCTTTAGAATTAAGGGCCTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639617.1
3UTR CAA 72 bp AACACCCTGGCTGGGGTGGGGCCCTGTACTGTAGCCTaGGCCTTTCATTCAGACAGAAAGGCTCTACCTTCT +
Preference number: 4 (lower is better)
Translates to: NTLAGVGPCTVA*AFHSDRKALPS
Trigger: AGAAGGTAGAGCCTTTCTGTCTGAATGAAAGGCCAAGGCTACAGTACAGGGCCCCACCCCAGCCAGGGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR TCA 90 bp TTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGGCCCTTAATTCTAAAGCCTTCCAGGGCAGCAGGTaGGTCACTCGGCTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: LPWALLPAKAYKALNSKAFQGSR*VTRLAP
Trigger: TGGAGCAAGCCGAGTGACTCACCTGCTGCCCTGGAA...GGCTTTAGAATTAAGGGCCTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR TCA 90 bp TATATAGAATGCTTGTGCCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTTCCAGGGCAGCAGGTaGGTCACTCGGCTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: YIECLCPLALVLTLGPLTFQGSR*VTRLAP
Trigger: TGGAGCAAGCCGAGTGACTCACCTGCTGCCCTGGAA...GGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGGCACAAGCATTCTATATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR TCA 90 bp TCCAGTGACCTTGGAATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATTACTTGTTCGCCCTCGCTaGGGTCTGAATAGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: SSDLGMQDLPEASTTWALLVRPR*GLNRRK
Trigger: TTTCCTCCTATTCAGACCTCAGCGAGGGCGAACAAG...TAATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCATTCCAAGGTCACTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR TCA 90 bp TCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGGCCCTTAATTCTAAAGTGGGGACACGGTCTGTaGGCAGTCGCTCTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: SYLGPSYLPKPTRPLILKWGHGL*AVALRL
Trigger: GAGCCTGAGAGCGACTGCTCACAGACCGTGTCCCCA...CTTTAGAATTAAGGGCCTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR TCA 90 bp AACATGAAGTCCCAGCTCTGTGGCAACCAGAGCCATCCTTTCTTCCACCTCCCGAAGTCACTTCACTGTTaGGCCCCATGCTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: NMKSQLCGNQSHPFFHLPKSLHC*APCCFS
Trigger: GGAGAAGCAGCATGGGGCTCAACAGTGAAGTGACTT...CGGGAGGTGGAAGAAAGGATGGCTCTGGTTGCCACAGAGCTGGGACTTCATGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR GCA 90 bp CTCTTGTGGCCCTCTCTAGAAGAACATGAAGTCCCAGCTCTGTGGCAACCAGAGAAACATGGGAGGGGCTaGATACCATGCAGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: LLWPSLEEHEVPALWQPEKHGRG*IPCRED
Trigger: GTCCTCCCTGCATGGTATGCAGCCCCTCCCATGTTT...CTCTGGTTGCCACAGAGCTGGGACTTCATGTTCTTCTAGAGAGGGCCACAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310585.4
CDS-3UTR GCA 90 bp TTAGGGGGCCAGGAAAAGGGTGGAGGGTACATGCTTTCATCATTCCAAAGCCTCATCCACCGAAGACCATaGTCGGAGCTTGGCTTCCGC +
Preference number: 4 (lower is better)
Translates to: LGGQEKGGGYMLSSFQSLIHRRP*SELGFR
Trigger: GCGGAAGCCAAGCTCCGAGCATGGTCTTCGGTGGAT...GAGGCTTTGGAATGATGAAAGCATGTACCCTCCACCCTTTTCCTGGCCCCCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000639617.1
CDS-3UTR GCA 90 bp CCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGGATGAACATCACTGTCTaGCACAGCTGTAGCCATGCC +
Preference number: 4 (lower is better)
Translates to: PVGSRSYLGPSYLPKPTRMNITV*HSCSHA
Trigger: GGCATGGCTACAGCTGTGGCAGACAGTGATGTTCAT...CCTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
CDS-3UTR GCA 90 bp CGGTGTGGGCTCTCCCTTCTCGGTATATCTGCAACTAAACAGGACTGGGGTTGTCACTGGCACAATTCCTaGCTCTCAGCAGGCATCAGC +
Preference number: 4 (lower is better)
Translates to: RCGLSLLGISATKQDWGCHWHNS*LSAGIS
Trigger: GCTGATGCCTGCTGAGAGGCAGGAATTGTGCCAGTG...ACAACCCCAGTCCTGTTTAGTTGCAGATATACCGAGAAGGGAGAGCCCACACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR GCA 90 bp TGCCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAATTGGAATGCAGGATCTaGCAGAGGCCTCCACTACGT +
Preference number: 4 (lower is better)
Translates to: CPLALVLTLGPLTCQSLQLECRI*QRPPLR
Trigger: ACGTAGTGGAGGCCTCTGGCAGATCCTGCATTCCAA...TTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR GCA 90 bp CATCCTTTCTTCCACCTCCCGCTCAGAGAGCTCTGCGTGAATGGGCAGCCCGGCCACTTATATATAGAATaGTTGTGCCCGTTGGCTCTC +
Preference number: 4 (lower is better)
Translates to: HPFFHLPLRELCVNGQPGHLYIE*LCPLAL
Trigger: GAGAGCCAACGGGCACAAGCATTCTATATATAAGTG...GCCGGGCTGCCCATTCACGCAGAGCTCTCTGAGCGGGAGGTGGAAGAAAGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR GCA 90 bp AATGCTTGTGCCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGGTCCGAGGACACTCTaGGACTTGTCTGACAAGTCC +
Preference number: 4 (lower is better)
Translates to: NACARWLSFLPWALLPAKGPRTL*DLSDKS
Trigger: GGACTTGTCAGACAAGTCGCAGAGTGTCCTCGGACC...TTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGGCACAAGCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383847.7
ENST00000639617.1
CDS-3UTR GCA 90 bp CTCTTGTGGCCCTCTCTAGAAGAACATGAAGTCCCAGCTCTGTGGCAACCAGAGGGTCCGAGGACACTCTaGGACTTGTCTGACAAGTCC +
Preference number: 4 (lower is better)
Translates to: LLWPSLEEHEVPALWQPEGPRTL*DLSDKS
Trigger: GGACTTGTCAGACAAGTCGCAGAGTGTCCTCGGACC...CTCTGGTTGCCACAGAGCTGGGACTTCATGTTCTTCTAGAGAGGGCCACAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383847.7
ENST00000639617.1
CDS-3UTR CCA 90 bp ATTAGGGGGCCAGGAAAAGGGTGGAGGGTACATGCTTTCATCATTCCAAAGCCTCCTTCTCCCCACGTCTaGCCCTGCTTCCTGACCTCT +
Preference number: 4 (lower is better)
Translates to: IRGPGKGWRVHAFIIPKPPSPHV*PCFLTS
Trigger: AGAGGTCAGGAAGCAGGGCCAGACGTGGGGAGAAGG...AGGCTTTGGAATGATGAAAGCATGTACCCTCCACCCTTTTCCTGGCCCCCTAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310585.4
CDS-3UTR CCA 90 bp ATAAAAACGTACAGTCCAGTGACCTTGGAATGCAGGATCTGCCAGAGGCCTCCAAGGCACTTTCCCGGCTaGGGGGCAGTTTGGCGAGAA +
Preference number: 4 (lower is better)
Translates to: IKTYSPVTLECRICQRPPRHFPG*GAVWRE
Trigger: TTCTCGCCAAACTGCCCCCCAGCCGGGAAAGTGCCT...TGGAGGCCTCTGGCAGATCCTGCATTCCAAGGTCACTGGACTGTACGTTTTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp ATTAACACCCTGGCTGGGGTGGGGCCCTGTACTGTAGCCTTGGCCTTTCATTCAGGGCCAGGAAAAGGGTaGAGGGTACATGCTTTCATC +
Preference number: 4 (lower is better)
Translates to: INTLAGVGPCTVALAFHSGPGKG*RVHAFI
Trigger: GATGAAAGCATGTACCCTCCACCCTTTTCCTGGCCC...TGAATGAAAGGCCAAGGCTACAGTACAGGGCCCCACCCCAGCCAGGGTGTTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp GTGGCCCTCTTGTGGCCCTCTCTAGAAGAACATGAAGTCCCAGCTCTGTGGCAACCTGTGGCCCTCTTGTaGCCCTCTCTAGAAGAACAT +
Preference number: 4 (lower is better)
Translates to: VALLWPSLEEHEVPALWQPVALL*PSLEEH
Trigger: ATGTTCTTCTAGAGAGGGCCACAAGAGGGCCACAGG...TTGCCACAGAGCTGGGACTTCATGTTCTTCTAGAGAGGGCCACAAGAGGGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp ATGAGCCACTTATATATAGAATGCTTGTGCCCGTTGGCTCTCGTTCTTACCTTGTCCCGGCCACCCCTGTaGCCCTCTTGTGGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: MSHLYIECLCPLALVLTLSRPPL*PSCGPL
Trigger: GAGAGGGCCACAAGAGGGCCACAGGGGTGGCCGGGA...CAAGGTAAGAACGAGAGCCAACGGGCACAAGCATTCTATATATAAGTGGCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp CCTTGGAATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGCTCTCGTTCTTACCTTaGGCCCTCTTACCTGCCAAA +
Preference number: 4 (lower is better)
Translates to: PWNAGSARGLHYVGINTLLSFLP*ALLPAK
Trigger: TTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAG...CAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCATTCCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp GCCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGCTCTCGTTCTTACCTTaGGCCCTCTTACCTGCCAAA +
Preference number: 4 (lower is better)
Translates to: ARWLSFLPWALLPAKAYKLSFLP*ALLPAK
Trigger: TTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAG...CTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp CCTTGGAATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGACATTCACCTTTAGCTaGAGCAGCCGTCTCTATCCC +
Preference number: 4 (lower is better)
Translates to: PWNAGSARGLHYVGINTLTFTFS*SSRLYP
Trigger: GGGATAGAGACGGCTGCTCCAGCTAAAGGTGAATGT...CAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCATTCCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340957.9
CDS-3UTR CCA 90 bp TGCATCTTTCATTCCTTCTGCCTTCGGAAGGCAGGAGGCAGCTACAGCTGGAGGCAACTGACCTTTAGCTaGAGCAGCCGTCTCTATCCC +
Preference number: 4 (lower is better)
Translates to: CIFHSFCLRKAGGSYSWRQLTFS*SSRLYP
Trigger: GGGATAGAGACGGCTGCTCCAGCTAAAGGTCAGTTG...CCTCCAGCTGTAGCTGCCTCCTGCCTTCCGAAGGCAGAAGGAATGAAAGATGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR CCA 90 bp CGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGGCCCCAGTTCATCCTACCTaGAATCTGACCCACTACCCA +
Preference number: 4 (lower is better)
Translates to: RWLSFLPWALLPAKAYKAPVHPT*NLTHYP
Trigger: TGGGTAGTGGGTCAGATTCCAGGTAGGATGAACTGG...GGCCTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR CCA 90 bp GTCATGGCCTCCCCCGGGAGGGCAGCCCTTCCGACAGCGACGACAAATGCCAATTTATGTCACCAGTATTaGCAGACTCATTGGAATCGT +
Preference number: 4 (lower is better)
Translates to: VMASPGRAALPTATTNANLCHQY*QTHWNR
Trigger: ACGATTCCAATGAGTCTGCCAATACTGGTGACATAA...ATTGGCATTTGTCGTCGCTGTCGGAAGGGCTGCCCTCCCGGGGGAGGCCATGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639617.1
3UTR CAA 72 bp ATAGAATGCTTGTGCCCGTTGGCTCTCGTTCTTACCTaGGGCCCTCTTACCTGCCAAAGCCTACAAGGCCCT +
Preference number: 4 (lower is better)
Translates to: IECLCPLALVLT*GPLTCQSLQGP
Trigger: AGGGCCTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGGCACAAGCATTCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR TCA 90 bp AATGCTTGTGCCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAATCTGGCCCTGCTTCCTaGCCTCTTTCCTTTGCATCA +
Preference number: 4 (lower is better)
Translates to: NACARWLSFLPWALLPAKSGPAS*PLSFAS
Trigger: TGATGCAAAGGAAAGAGGTCAGGAAGCAGGGCCAGA...TTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGGCACAAGCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310585.4
CDS-3UTR TCA 90 bp CACCACTATGTCTGGCTTTTTGTGGAGACAGGGTTTCGCATATTGCAGGCTAGTTTCCAGGGCAGCAGGTaGGTCACTCGGCTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: HHYVWLFVETGFRILQASFQGSR*VTRLAP
Trigger: TGGAGCAAGCCGAGTGACTCACCTGCTGCCCTGGAA...ACTAGCCTGCAATATGCGAAACCCTGTCTCCACAAAAAGCCAGACATAGTGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR TCA 90 bp CTCTTGTGGCCCTCTCTAGAAGAACATGAAGTCCCAGCTCTGTGGCAACCAGAGCTTGTTCGCCCTCGCTaGGGTCTGAATAGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: LLWPSLEEHEVPALWQPELVRPR*GLNRRK
Trigger: TTTCCTCCTATTCAGACCTCAGCGAGGGCGAACAAG...CTCTGGTTGCCACAGAGCTGGGACTTCATGTTCTTCTAGAGAGGGCCACAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR TCA 90 bp GTGGGCATTAACACCCTGGCTGGGGTGGGGCCCTGTACTGTAGCCTTGGCCTTTGGCATTTTAAGAACATaGACATCACTGTCTGCCACA +
Preference number: 4 (lower is better)
Translates to: VGINTLAGVGPCTVALAFGILRT*TSLSAT
Trigger: TGTGGCAGACAGTGATGTTCATGTTCTTAAAATGCC...AAAGGCCAAGGCTACAGTACAGGGCCCCACCCCAGCCAGGGTGTTAATGCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
CDS-3UTR TCA 90 bp CAGGAAAAGGGTGGAGGGTACATGCTTTCATCATTCCAAAGCCTCCCAGAGAAGCGATGGAGAGGTGAATaGAGCACAGCACGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: QEKGGGYMLSSFQSLPEKRWRGE*STARAQ
Trigger: CTGGGCTCGTGCTGTGCTTCATTCACCTCTCCATCG...CTTCTCTGGGAGGCTTTGGAATGATGAAAGCATGTACCCTCCACCCTTTTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000639617.1
CDS-3UTR TCA 90 bp CATCCTTTCTTCCACCTCCCGCTCAGAGAGCTCTGCGTGAATGGGCAGCCCGGCAAGAGAAGATCCGACTaGAAAAACAGACCAAAAACC +
Preference number: 4 (lower is better)
Translates to: HPFFHLPLRELCVNGQPGKRRSD*KNRPKT
Trigger: GGTTTTTGGTCTGTTTTTTCAGTCGGATCTTCTCTT...GCCGGGCTGCCCATTCACGCAGAGCTCTCTGAGCGGGAGGTGGAAGAAAGGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR TCA 90 bp GCCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGAAACGTACAGTCCAGTaGCCTTGGAATGCAGGATCT +
Preference number: 4 (lower is better)
Translates to: ARWLSFLPWALLPAKAYKKRTVQ*PWNAGS
Trigger: AGATCCTGCATTCCAAGGTCACTGGACTGTACGTTT...CTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR TCA 90 bp CTTGGAATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGAAACGTACAGTCCAGTaGCCTTGGAATGCAGGATCT +
Preference number: 4 (lower is better)
Translates to: LGMQDLPEASTTWALTPWKRTVQ*PWNAGS
Trigger: AGATCCTGCATTCCAAGGTCACTGGACTGTACGTTT...CCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCATTCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR TCA 90 bp CTTGGAATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGAATGTACATCACAACTaGCCTTTAGCTGGAGCAGCC +
Preference number: 4 (lower is better)
Translates to: LGMQDLPEASTTWALTPWNVHHN*PLAGAA
Trigger: GGCTGCTCCAGCTAAAGGTCAGTTGTGATGTACATT...CCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCATTCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR TCA 90 bp CTCTTGTGGCCCTCTCTAGAAGAACATGAAGTCCCAGCTCTGTGGCAACCAGAGATCCTACCTGGAATCTaGCCCACTACCCACCTGCAA +
Preference number: 4 (lower is better)
Translates to: LLWPSLEEHEVPALWQPEILPGI*PTTHLQ
Trigger: TTGCAGGTGGGTAGTGGGTCAGATTCCAGGTAGGAT...CTCTGGTTGCCACAGAGCTGGGACTTCATGTTCTTCTAGAGAGGGCCACAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR TCA 90 bp CACAACCATAAAAACGTACAGTCCAGTGACCTTGGAATGCAGGATCTGCCAGAGAGGCGGGGAGGAGTCTaGCATCTGGGTCCAGACATC +
Preference number: 4 (lower is better)
Translates to: HNHKNVQSSDLGMQDLPERRGGV*HLGPDI
Trigger: GATGTCTGGACCCAGATGTCAGACTCCTCCCCGCCT...CTCTGGCAGATCCTGCATTCCAAGGTCACTGGACTGTACGTTTTTATGGTTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR GCA 90 bp ATAAAAACGTACAGTCCAGTGACCTTGGAATGCAGGATCTGCCAGAGGCCTCCACTGCTCAGCCACTCCTaGTGCAAAGCGAGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: IKTYSPVTLECRICQRPPLLSHS*CKASLL
Trigger: CAAGAGGCTCGCTTTGCAGCAGGAGTGGCTGAGCAG...TGGAGGCCTCTGGCAGATCCTGCATTCCAAGGTCACTGGACTGTACGTTTTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR GCA 90 bp TTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGGCCCTTAATTCTAAAGCCCTGCTCAGCCACTCCTaGTGCAAAGCGAGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: LPWALLPAKAYKALNSKALLSHS*CKASLL
Trigger: CAAGAGGCTCGCTTTGCAGCAGGAGTGGCTGAGCAG...GGCTTTAGAATTAAGGGCCTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR GCA 90 bp ATAAAAACGTACAGTCCAGTGACCTTGGAATGCAGGATCTGCCAGAGGCCTCCATCCGCGATGGCAAACTaGTCAGCCACTCCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: IKTYSPVTLECRICQRPPSAMAN*SATPAA
Trigger: TGCAGCAGGAGTGGCTGAGCAGTTTGCCATCGCGGA...TGGAGGCCTCTGGCAGATCCTGCATTCCAAGGTCACTGGACTGTACGTTTTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR GCA 90 bp TTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGGCCCTTAATTCTAAAGCCATCCACCGAAGACCATaGTCGGAGCTTGGCTTCCGC +
Preference number: 4 (lower is better)
Translates to: LPWALLPAKAYKALNSKAIHRRP*SELGFR
Trigger: GCGGAAGCCAAGCTCCGAGCATGGTCTTCGGTGGAT...GGCTTTAGAATTAAGGGCCTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR GCA 90 bp TGCCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAATGAACATCACTGTCTaGCACAGCTGTAGCCATGCC +
Preference number: 4 (lower is better)
Translates to: CPLALVLTLGPLTCQSLQMNITV*HSCSHA
Trigger: GGCATGGCTACAGCTGTGGCAGACAGTGATGTTCAT...TTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
CDS-3UTR GCA 90 bp AGTCCAGTGACCTTGGAATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATAGGGTGGAGGGTACATaGTTTCATCATTCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: SPVTLECRICQRPPLRGHRVEGT*FHHSKA
Trigger: GGCTTTGGAATGATGAAAGCATGTACCCTCCACCCT...ATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCATTCCAAGGTCACTGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR GCA 90 bp GCCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGAGGGTGGAGGGTACATaGTTTCATCATTCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: ARWLSFLPWALLPAKAYKRVEGT*FHHSKA
Trigger: GGCTTTGGAATGATGAAAGCATGTACCCTCCACCCT...CTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR GCA 90 bp TTAGGGGGCCAGGAAAAGGGTGGAGGGTACATGCTTTCATCATTCCAAAGCCTCTTGGGCCCTCTTACCTaGCAAAGCCTACAAGGCCCT +
Preference number: 4 (lower is better)
Translates to: LGGQEKGGGYMLSSFQSLLGPLT*QSLQGP
Trigger: AGGGCCTTGTAGGCTTTGGCAGGTAAGAGGGCCCAA...GAGGCTTTGGAATGATGAAAGCATGTACCCTCCACCCTTTTCCTGGCCCCCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000639617.1
CDS-3UTR GCA 90 bp GTGGGCATTAACACCCTGGCTGGGGTGGGGCCCTGTACTGTAGCCTTGGCCTTTTATATAGAATGCTTGTaGCCGTTGGCTCTCGTTCTT +
Preference number: 4 (lower is better)
Translates to: VGINTLAGVGPCTVALAFYIECL*PLALVL
Trigger: AAGAACGAGAGCCAACGGGCACAAGCATTCTATATA...AAAGGCCAAGGCTACAGTACAGGGCCCCACCCCAGCCAGGGTGTTAATGCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp AACACCCTGGCTGGGGTGGGGCCCTGTACTGTAGCCTTGGCCTTTCATTCAGACCTCATTCTTCCAGTTTaGGCTGAAATACCACCTCGT +
Preference number: 4 (lower is better)
Translates to: NTLAGVGPCTVALAFHSDLILPV*AEIPPR
Trigger: ACGAGGTGGTATTTCAGCCCAAACTGGAAGAATGAG...GTCTGAATGAAAGGCCAAGGCTACAGTACAGGGCCCCACCCCAGCCAGGGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310585.4
CDS-3UTR CCA 90 bp CTAATGAGCCACTTATATATAGAATGCTTGTGCCCGTTGGCTCTCGTTCTTACCGGGCTCGCCGGGACTTaGGCAGCATCGCGACTGTGT +
Preference number: 4 (lower is better)
Translates to: LMSHLYIECLCPLALVLTGLAGT*AASRLC
Trigger: ACACAGTCGCGATGCTGCCCAAGTCCCGGCGAGCCC...GGTAAGAACGAGAGCCAACGGGCACAAGCATTCTATATATAAGTGGCTCATTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000639617.1
CDS-3UTR CCA 90 bp CTTCCCACAACCATAAAAACGTACAGTCCAGTGACCTTGGAATGCAGGATCTGCAGCGCAGCGATCTCCTaGATAGTTAGGGCTCGCCGG +
Preference number: 4 (lower is better)
Translates to: LPTTIKTYSPVTLECRICSAAIS*IVRARR
Trigger: CCGGCGAGCCCTAACTATCCAGGAGATCGCTGCGCT...GCAGATCCTGCATTCCAAGGTCACTGGACTGTACGTTTTTATGGTTGTGGGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000639617.1
CDS-3UTR CCA 90 bp CACAACCATAAAAACGTACAGTCCAGTGACCTTGGAATGCAGGATCTGCCAGAGAGCGCAGCGATCTCCTaGATAGTTAGGGCTCGCCGG +
Preference number: 4 (lower is better)
Translates to: HNHKNVQSSDLGMQDLPESAAIS*IVRARR
Trigger: CCGGCGAGCCCTAACTATCCAGGAGATCGCTGCGCT...CTCTGGCAGATCCTGCATTCCAAGGTCACTGGACTGTACGTTTTTATGGTTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000639617.1
CDS-3UTR CCA 90 bp AGTCCAGTGACCTTGGAATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATATGACTGTCACTCACTaGCACAATTCCTGCCTCTCA +
Preference number: 4 (lower is better)
Translates to: SPVTLECRICQRPPLRGHMTVTH*HNSCLS
Trigger: TGAGAGGCAGGAATTGTGCCAGTGAGTGACAGTCAT...ATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCATTCCAAGGTCACTGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp CCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGGATGACTGTCACTCACTaGCACAATTCCTGCCTCTCA +
Preference number: 4 (lower is better)
Translates to: PVGSRSYLGPSYLPKPTRMTVTH*HNSCLS
Trigger: TGAGAGGCAGGAATTGTGCCAGTGAGTGACAGTCAT...CCTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp TTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGGCCCTTAATTCTAAAGCCGAGGCCTCCACTACGTaGGCATTAACACCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LPWALLPAKAYKALNSKAEASTT*ALTPWL
Trigger: CAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCCTC...GGCTTTAGAATTAAGGGCCTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp ATTAACACCCTGGCTGGGGTGGGGCCCTGTACTGTAGCCTTGGCCTTTCATTCAAATGCTTGTGCCCGTTaGCTCTCGTTCTTACCTTGG +
Preference number: 4 (lower is better)
Translates to: INTLAGVGPCTVALAFHSNACAR*LSFLPW
Trigger: CCAAGGTAAGAACGAGAGCCAACGGGCACAAGCATT...TGAATGAAAGGCCAAGGCTACAGTACAGGGCCCCACCCCAGCCAGGGTGTTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp TGCATCTTTCATTCCTTCTGCCTTCGGAAGGCAGGAGGCAGCTACAGCTGGAGGTCCAACATTCACCTCTaGCAAGTCCTGACTGTCCAC +
Preference number: 4 (lower is better)
Translates to: CIFHSFCLRKAGGSYSWRSNIHL*QVLTVH
Trigger: GTGGACAGTCAGGACTTGCCAGAGGTGAATGTTGGA...CCTCCAGCTGTAGCTGCCTCCTGCCTTCCGAAGGCAGAAGGAATGAAAGATGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR TCA 90 bp CACAACCATAAAAACGTACAGTCCAGTGACCTTGGAATGCAGGATCTGCCAGAGTGCCACTGCCAGGCATaGTGTGGGTCACTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: HNHKNVQSSDLGMQDLPECHCQA*CGSLFL
Trigger: GAGGAACAGTGACCCACATCATGCCTGGCAGTGGCA...CTCTGGCAGATCCTGCATTCCAAGGTCACTGGACTGTACGTTTTTATGGTTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
CDS-3UTR TCA 90 bp CTTCCCACAACCATAAAAACGTACAGTCCAGTGACCTTGGAATGCAGGATCTGCTGCCACTGCCAGGCATaGTGTGGGTCACTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: LPTTIKTYSPVTLECRICCHCQA*CGSLFL
Trigger: GAGGAACAGTGACCCACATCATGCCTGGCAGTGGCA...GCAGATCCTGCATTCCAAGGTCACTGGACTGTACGTTTTTATGGTTGTGGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
CDS-3UTR TCA 90 bp ATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGCTGGGGAAGAGAAGATCCGACTaGAAAAACAGACCAAAAACC +
Preference number: 4 (lower is better)
Translates to: MQDLPEASTTWALTPWLGKRRSD*KNRPKT
Trigger: GGTTTTTGGTCTGTTTTTTCAGTCGGATCTTCTCTT...CCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR TCA 90 bp GTGGCCCTCTTGTGGCCCTCTCTAGAAGAACATGAAGTCCCAGCTCTGTGGCAAAAACGTACAGTCCAGTaGCCTTGGAATGCAGGATCT +
Preference number: 4 (lower is better)
Translates to: VALLWPSLEEHEVPALWQKRTVQ*PWNAGS
Trigger: AGATCCTGCATTCCAAGGTCACTGGACTGTACGTTT...TTGCCACAGAGCTGGGACTTCATGTTCTTCTAGAGAGGGCCACAAGAGGGCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR TCA 90 bp TATCTTCTCACTGCTGGGAGTGGACCATGCTTATGTCACCAGTATTGGCAGACTCGGTGTGATGAAAAGTaGCTGGGGCTGCACAGCCAC +
Preference number: 4 (lower is better)
Translates to: YLLTAGSGPCLCHQYWQTRCDEK*LGLHSH
Trigger: GTGGCTGTGCAGCCCCAGTCACTTTTCATCACACCG...AGTCTGCCAATACTGGTGACATAAGCATGGTCCACTCCCAGCAGTGAGAAGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR GCA 90 bp GTGGCCCTCTTGTGGCCCTCTCTAGAAGAACATGAAGTCCCAGCTCTGTGGCAACCTTTCTACTGCTACTaGCATTGCCCTTTCTCAAGC +
Preference number: 4 (lower is better)
Translates to: VALLWPSLEEHEVPALWQPFYCY*HCPFSS
Trigger: GCTTGAGAAAGGGCAATGGCAGTAGCAGTAGAAAGG...TTGCCACAGAGCTGGGACTTCATGTTCTTCTAGAGAGGGCCACAAGAGGGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310585.4
CDS-3UTR GCA 90 bp CCTTGGAATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGTCCCCTGGCTTTGCTTaGCCATATCTGTTGATAAGA +
Preference number: 4 (lower is better)
Translates to: PWNAGSARGLHYVGINTLSPGFA*PYLLIR
Trigger: TCTTATCAACAGATATGGGCAAGCAAAGCCAGGGGA...CAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCATTCCAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310585.4
CDS-3UTR GCA 90 bp ATTAGGGGGCCAGGAAAAGGGTGGAGGGTACATGCTTTCATCATTCCAAAGCCTGTGAGTCACTCGGCTTaGTCCAGCCCTTCCACTCAA +
Preference number: 4 (lower is better)
Translates to: IRGPGKGWRVHAFIIPKPVSHSA*SSPSTQ
Trigger: TTGAGTGGAAGGGCTGGAGCAAGCCGAGTGACTCAC...AGGCTTTGGAATGATGAAAGCATGTACCCTCCACCCTTTTCCTGGCCCCCTAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000639617.1
CDS-3UTR GCA 90 bp TTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGGCCCTTAATTCTAAAGCCCTCAGCCACTCCTGCTaGAAAGCGAGCCTCTTGTTC +
Preference number: 4 (lower is better)
Translates to: LPWALLPAKAYKALNSKALSHSC*KASLLF
Trigger: GAACAAGAGGCTCGCTTTGCAGCAGGAGTGGCTGAG...GGCTTTAGAATTAAGGGCCTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR GCA 90 bp ATTAACACCCTGGCTGGGGTGGGGCCCTGTACTGTAGCCTTGGCCTTTCATTCAAGGGTGGAGGGTACATaGTTTCATCATTCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: INTLAGVGPCTVALAFHSRVEGT*FHHSKA
Trigger: GGCTTTGGAATGATGAAAGCATGTACCCTCCACCCT...TGAATGAAAGGCCAAGGCTACAGTACAGGGCCCCACCCCAGCCAGGGTGTTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR GCA 90 bp ATAAAAACGTACAGTCCAGTGACCTTGGAATGCAGGATCTGCCAGAGGCCTCCACCAGTGACCTTGGAATaGAGGATCTGCCAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: IKTYSPVTLECRICQRPPPVTLE*RICQRP
Trigger: AGGCCTCTGGCAGATCCTGCATTCCAAGGTCACTGG...TGGAGGCCTCTGGCAGATCCTGCATTCCAAGGTCACTGGACTGTACGTTTTTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR GCA 90 bp TATATAGAATGCTTGTGCCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCCCAGTGACCTTGGAATaGAGGATCTGCCAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: YIECLCPLALVLTLGPLTPVTLE*RICQRP
Trigger: AGGCCTCTGGCAGATCCTGCATTCCAAGGTCACTGG...GGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGGCACAAGCATTCTATATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR GCA 90 bp CACAACCATAAAAACGTACAGTCCAGTGACCTTGGAATGCAGGATCTGCCAGAGACCTGGGAAATACCATaGAGGGAGGACCTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: HNHKNVQSSDLGMQDLPETWEIP*REDLAS
Trigger: GCTGGCCAGGTCCTCCCTGCATGGTATTTCCCAGGT...CTCTGGCAGATCCTGCATTCCAAGGTCACTGGACTGTACGTTTTTATGGTTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340957.9
ENST00000383847.7
ENST00000639617.1
CDS-3UTR GCA 90 bp CAGGAAAAGGGTGGAGGGTACATGCTTTCATCATTCCAAAGCCTCCCAGAGAAGGACCCACTACCCACCTaGAACAAGTCTTCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: QEKGGGYMLSSFQSLPEKDPLPT*NKSSRG
Trigger: GCCTCTGGAAGACTTGTTGCAGGTGGGTAGTGGGTC...CTTCTCTGGGAGGCTTTGGAATGATGAAAGCATGTACCCTCCACCCTTTTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR GCA 90 bp CAAAAATTCCAGGAACTGCTGAGTCAGGAGAGCGTTTTTCAAGACATCTGGCCCACAGGACTGGGGTTGTaGGTCCCTCTCCGGTGTGAT +
Preference number: 4 (lower is better)
Translates to: QKFQELLSQESVFQDIWPTGLGL*VPLRCD
Trigger: ATCACACCGGAGAGGGACGCACAACCCCAGTCCTGT...GGGCCAGATGTCTTGAAAAACGCTCTCCTGACTCAGCAGTTCCTGGAATTTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR CCA 90 bp TGCCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAACCATCAATTCTCCCCTaGCTTTGCTTGCCCATATCT +
Preference number: 4 (lower is better)
Translates to: CPLALVLTLGPLTCQSLQPSILP*LCLPIS
Trigger: AGATATGGGCAAGCAAAGCCAGGGGAGAATTGATGG...TTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310585.4
CDS-3UTR CCA 90 bp CACCACTATGTCTGGCTTTTTGTGGAGACAGGGTTTCGCATATTGCAGGCTAGTGCTTGGCTTCCGCGATaGCAAACTGCTCAGCCACTC +
Preference number: 4 (lower is better)
Translates to: HHYVWLFVETGFRILQASAWLPR*QTAQPL
Trigger: GAGTGGCTGAGCAGTTTGCCATCGCGGAAGCCAAGC...ACTAGCCTGCAATATGCGAAACCCTGTCTCCACAAAAAGCCAGACATAGTGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR CCA 90 bp TTAGGGGGCCAGGAAAAGGGTGGAGGGTACATGCTTTCATCATTCCAAAGCCTCGAAGTCCCAGCTCTGTaGCAACCAGAGCCATCCTTT +
Preference number: 4 (lower is better)
Translates to: LGGQEKGGGYMLSSFQSLEVPAL*QPEPSF
Trigger: AAAGGATGGCTCTGGTTGCCACAGAGCTGGGACTTC...GAGGCTTTGGAATGATGAAAGCATGTACCCTCCACCCTTTTCCTGGCCCCCTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000639617.1
CDS-3UTR CCA 90 bp CACACTGCAGACTCACACTATCTTCTCACTGCTGGGAGTGGACCATGCTTATGTGCAACTAAACAGGACTaGGGTTGTGCGTCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: HTADSHYLLTAGSGPCLCATKQD*GCASLS
Trigger: GGAGAGGGACGCACAACCCCAGTCCTGTTTAGTTGC...ACATAAGCATGGTCCACTCCCAGCAGTGAGAAGATAGTGTGAGTCTGCAGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR CCA 90 bp GTGGCCCTCTTGTGGCCCTCTCTAGAAGAACATGAAGTCCCAGCTCTGTGGCAAATGCACCACTATGTCTaGCTTTTTGTGGAGACAGGG +
Preference number: 4 (lower is better)
Translates to: VALLWPSLEEHEVPALWQMHHYV*LFVETG
Trigger: CCCTGTCTCCACAAAAAGCCAGACATAGTGGTGCAT...TTGCCACAGAGCTGGGACTTCATGTTCTTCTAGAGAGGGCCACAAGAGGGCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR TCA 90 bp CACAACCATAAAAACGTACAGTCCAGTGACCTTGGAATGCAGGATCTGCCAGAGAAAGGCAGGACTCTGTaGGGGGCGAGTTGTAGAGTG +
Preference number: 4 (lower is better)
Translates to: HNHKNVQSSDLGMQDLPEKGRTL*GASCRV
Trigger: CACTCTACAACTCGCCCCTCACAGAGTCCTGCCTTT...CTCTGGCAGATCCTGCATTCCAAGGTCACTGGACTGTACGTTTTTATGGTTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000639617.1
CDS-3UTR TCA 90 bp TCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGGCCCTTAATTCTAAAGGAGACGATGGAGAGGTaGATGAAGCACAGCACGAGC +
Preference number: 4 (lower is better)
Translates to: SYLGPSYLPKPTRPLILKETMER*MKHSTS
Trigger: GCTCGTGCTGTGCTTCATTCACCTCTCCATCGTCTC...CTTTAGAATTAAGGGCCTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR TCA 90 bp TTAGGGGGCCAGGAAAAGGGTGGAGGGTACATGCTTTCATCATTCCAAAGCCTCCTCTCTAGAAGAACATaGAGTCCCAGCTCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: LGGQEKGGGYMLSSFQSLLSRRT*SPSSVA
Trigger: TGCCACAGAGCTGGGACTTCATGTTCTTCTAGAGAG...GAGGCTTTGGAATGATGAAAGCATGTACCCTCCACCCTTTTCCTGGCCCCCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000639617.1
CDS-3UTR GCA 90 bp CTTCCCACAACCATAAAAACGTACAGTCCAGTGACCTTGGAATGCAGGATCTGCGTGAGTCACTCGGCTTaGTCCAGCCCTTCCACTCAA +
Preference number: 4 (lower is better)
Translates to: LPTTIKTYSPVTLECRICVSHSA*SSPSTQ
Trigger: TTGAGTGGAAGGGCTGGAGCAAGCCGAGTGACTCAC...GCAGATCCTGCATTCCAAGGTCACTGGACTGTACGTTTTTATGGTTGTGGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR GCA 90 bp CTTCCCACAACCATAAAAACGTACAGTCCAGTGACCTTGGAATGCAGGATCTGCCTCAGCCACTCCTGCTaGAAAGCGAGCCTCTTGTTC +
Preference number: 4 (lower is better)
Translates to: LPTTIKTYSPVTLECRICLSHSC*KASLLF
Trigger: GAACAAGAGGCTCGCTTTGCAGCAGGAGTGGCTGAG...GCAGATCCTGCATTCCAAGGTCACTGGACTGTACGTTTTTATGGTTGTGGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR GCA 90 bp TCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGGCCCTTAATTCTAAAGCACTGGCACAATTCCTaGCTCTCAGCAGGCATCAGC +
Preference number: 4 (lower is better)
Translates to: SYLGPSYLPKPTRPLILKHWHNS*LSAGIS
Trigger: GCTGATGCCTGCTGAGAGGCAGGAATTGTGCCAGTG...CTTTAGAATTAAGGGCCTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR GCA 90 bp CAGGAAAAGGGTGGAGGGTACATGCTTTCATCATTCCAAAGCCTCCCAGAGAAGTTGGAATGCAGGATCTaGCAGAGGCCTCCACTACGT +
Preference number: 4 (lower is better)
Translates to: QEKGGGYMLSSFQSLPEKLECRI*QRPPLR
Trigger: ACGTAGTGGAGGCCTCTGGCAGATCCTGCATTCCAA...CTTCTCTGGGAGGCTTTGGAATGATGAAAGCATGTACCCTCCACCCTTTTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000639617.1
CDS-3UTR GCA 90 bp CCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGGCACTTATATATAGAATaGTTGTGCCCGTTGGCTCTC +
Preference number: 4 (lower is better)
Translates to: PVGSRSYLGPSYLPKPTRHLYIE*LCPLAL
Trigger: GAGAGCCAACGGGCACAAGCATTCTATATATAAGTG...CCTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR GCA 90 bp AATGCTTGTGCCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAACCATTCCCTAGACAGTaGCAACAGGCAATGTACATC +
Preference number: 4 (lower is better)
Translates to: NACARWLSFLPWALLPAKPFPRQ*QQAMYI
Trigger: GATGTACATTGCCTGTTGGCACTGTCTAGGGAATGG...TTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGGCACAAGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR CCA 90 bp TTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGGCCCTTAATTCTAAAGCCGCTCCCCATCTCTTCTaGACTATTCTGATGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LPWALLPAKAYKALNSKAAPHLF*TILMAG
Trigger: GCCAGCCATCAGAATAGTCCAGAAGAGATGGGGAGC...GGCTTTAGAATTAAGGGCCTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310585.4
CDS-3UTR CCA 90 bp AACACCCTGGCTGGGGTGGGGCCCTGTACTGTAGCCTTGGCCTTTCATTCAGACCTCCAACATTCACCTTaGGTAACACCATTAGAAAGT +
Preference number: 4 (lower is better)
Translates to: NTLAGVGPCTVALAFHSDLQHSP*VTPLES
Trigger: ACTTTCTAATGGTGTTACCCAAGGTGAATGTTGGAG...GTCTGAATGAAAGGCCAAGGCTACAGTACAGGGCCCCACCCCAGCCAGGGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310585.4
CDS-3UTR CCA 90 bp TTAGGGGGCCAGGAAAAGGGTGGAGGGTACATGCTTTCATCATTCCAAAGCCTCTGGTCCTTCACCACCTaGGAAATACCTGGAGATAGG +
Preference number: 4 (lower is better)
Translates to: LGGQEKGGGYMLSSFQSLWSFTT*EIPGDR
Trigger: CCTATCTCCAGGTATTTCCCAGGTGGTGAAGGACCA...GAGGCTTTGGAATGATGAAAGCATGTACCCTCCACCCTTTTCCTGGCCCCCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310585.4
CDS-3UTR CCA 90 bp CTTCCCACAACCATAAAAACGTACAGTCCAGTGACCTTGGAATGCAGGATCTGCCATAGGAGTCATCAGTaGAGTCCTCGCCATCCACCG +
Preference number: 4 (lower is better)
Translates to: LPTTIKTYSPVTLECRICHRSHQ*SPRHPP
Trigger: CGGTGGATGGCGAGGACTCCACTGATGACTCCTATG...GCAGATCCTGCATTCCAAGGTCACTGGACTGTACGTTTTTATGGTTGTGGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp CACAACCATAAAAACGTACAGTCCAGTGACCTTGGAATGCAGGATCTGCCAGAGCATAGGAGTCATCAGTaGAGTCCTCGCCATCCACCG +
Preference number: 4 (lower is better)
Translates to: HNHKNVQSSDLGMQDLPEHRSHQ*SPRHPP
Trigger: CGGTGGATGGCGAGGACTCCACTGATGACTCCTATG...CTCTGGCAGATCCTGCATTCCAAGGTCACTGGACTGTACGTTTTTATGGTTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp CTAATGAGCCACTTATATATAGAATGCTTGTGCCCGTTGGCTCTCGTTCTTACCAGGCACTTTCCCGGCTaGGGGGCAGTTTGGCGAGAA +
Preference number: 4 (lower is better)
Translates to: LMSHLYIECLCPLALVLTRHFPG*GAVWRE
Trigger: TTCTCGCCAAACTGCCCCCCAGCCGGGAAAGTGCCT...GGTAAGAACGAGAGCCAACGGGCACAAGCATTCTATATATAAGTGGCTCATTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp TTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGGCCCTTAATTCTAAAGCCGGGCCAGGAAAAGGGTaGAGGGTACATGCTTTCATC +
Preference number: 4 (lower is better)
Translates to: LPWALLPAKAYKALNSKAGPGKG*RVHAFI
Trigger: GATGAAAGCATGTACCCTCCACCCTTTTCCTGGCCC...GGCTTTAGAATTAAGGGCCTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp CTCTTGTGGCCCTCTCTAGAAGAACATGAAGTCCCAGCTCTGTGGCAACCAGAGATGACTGTCACTCACTaGCACAATTCCTGCCTCTCA +
Preference number: 4 (lower is better)
Translates to: LLWPSLEEHEVPALWQPEMTVTH*HNSCLS
Trigger: TGAGAGGCAGGAATTGTGCCAGTGAGTGACAGTCAT...CTCTGGTTGCCACAGAGCTGGGACTTCATGTTCTTCTAGAGAGGGCCACAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp ATGAGCCACTTATATATAGAATGCTTGTGCCCGTTGGCTCTCGTTCTTACCTTGTCCCTGGCCCCCAACTaGTACCTAACCAGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: MSHLYIECLCPLALVLTLSLAPN*YLTRAL
Trigger: GAGAGCCCTGGTTAGGTACCAGTTGGGGGCCAGGGA...CAAGGTAAGAACGAGAGCCAACGGGCACAAGCATTCTATATATAAGTGGCTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR CCA 90 bp CTAATGAGCCACTTATATATAGAATGCTTGTGCCCGTTGGCTCTCGTTCTTACCCCTGGCAGGATGGGTTaGGGTCACTTGACCCCTGCT +
Preference number: 4 (lower is better)
Translates to: LMSHLYIECLCPLALVLTPGRMG*GHLTPA
Trigger: AGCAGGGGTCAAGTGACCCCAACCCATCCTGCCAGG...GGTAAGAACGAGAGCCAACGGGCACAAGCATTCTATATATAAGTGGCTCATTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR CCA 90 bp CGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGGCCCTGTCATGCCATGGGTaGAGAAATTTAGGAAAGTTC +
Preference number: 4 (lower is better)
Translates to: RWLSFLPWALLPAKAYKALSCHG*RNLGKF
Trigger: GAACTTTCCTAAATTTCTCCACCCATGGCATGACAG...GGCCTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR CCA 90 bp AGTCCAGTGACCTTGGAATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATATGTCTGGCTTTTTGTaGAGACAGGGTTTCGCATAT +
Preference number: 4 (lower is better)
Translates to: SPVTLECRICQRPPLRGHMSGFL*RQGFAY
Trigger: ATATGCGAAACCCTGTCTCCACAAAAAGCCAGACAT...ATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCATTCCAAGGTCACTGGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639617.1
3UTR CAA 72 bp GAGCCTGGCCAATCACTAGATTTCACGTGTGAACAGTaGTTCTGTCCCACGTCCCCCTTTCTAACATGGGAC +
Preference number: 4 (lower is better)
Translates to: EPGQSLDFTCEQ*FCPTSPFLTWD
Trigger: GTCCCATGTTAGAAAGGGGGACGTGGGACAGAACAACTGTTCACACGTGAAATCTAGTGATTGGCCAGGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR TCA 90 bp CTTCCCACAACCATAAAAACGTACAGTCCAGTGACCTTGGAATGCAGGATCTGCCTTGTTCGCCCTCGCTaGGGTCTGAATAGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: LPTTIKTYSPVTLECRICLVRPR*GLNRRK
Trigger: TTTCCTCCTATTCAGACCTCAGCGAGGGCGAACAAG...GCAGATCCTGCATTCCAAGGTCACTGGACTGTACGTTTTTATGGTTGTGGGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR TCA 90 bp CTTCCCACAACCATAAAAACGTACAGTCCAGTGACCTTGGAATGCAGGATCTGCACTCTGCGACTTGTCTaGCAAGTCCATCGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LPTTIKTYSPVTLECRICTLRLV*QVHRPP
Trigger: TGGAGGACGATGGACTTGTCAGACAAGTCGCAGAGT...GCAGATCCTGCATTCCAAGGTCACTGGACTGTACGTTTTTATGGTTGTGGGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000383847.7
ENST00000639617.1
CDS-3UTR TCA 90 bp TTCTCACTGCTGGGAGTGGACCATGCTTATGTCACCAGTATTGGCAGACTCATTGCATGCTGGCTGTGTTaGTGCAGAGAACCAAAAGCC +
Preference number: 4 (lower is better)
Translates to: FSLLGVDHAYVTSIGRLIACWLC*CREPKA
Trigger: GGCTTTTGGTTCTCTGCATCAACACAGCCAGCATGC...AATGAGTCTGCCAATACTGGTGACATAAGCATGGTCCACTCCCAGCAGTGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR GCA 90 bp TCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGGCCCTTAATTCTAAAGACCTTCCCCCTAACATaGCCATACCCAGCAAAGGCA +
Preference number: 4 (lower is better)
Translates to: SYLGPSYLPKPTRPLILKTFPLT*PYPAKA
Trigger: TGCCTTTGCTGGGTATGGGCATGTTAGGGGGAAGGT...CTTTAGAATTAAGGGCCTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310585.4
CDS-3UTR GCA 90 bp CTAATGAGCCACTTATATATAGAATGCTTGTGCCCGTTGGCTCTCGTTCTTACCATCCACCGAAGACCATaGTCGGAGCTTGGCTTCCGC +
Preference number: 4 (lower is better)
Translates to: LMSHLYIECLCPLALVLTIHRRP*SELGFR
Trigger: GCGGAAGCCAAGCTCCGAGCATGGTCTTCGGTGGAT...GGTAAGAACGAGAGCCAACGGGCACAAGCATTCTATATATAAGTGGCTCATTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR GCA 90 bp CTTCCCACAACCATAAAAACGTACAGTCCAGTGACCTTGGAATGCAGGATCTGCTTGGAATGCAGGATCTaGCAGAGGCCTCCACTACGT +
Preference number: 4 (lower is better)
Translates to: LPTTIKTYSPVTLECRICLECRI*QRPPLR
Trigger: ACGTAGTGGAGGCCTCTGGCAGATCCTGCATTCCAA...GCAGATCCTGCATTCCAAGGTCACTGGACTGTACGTTTTTATGGTTGTGGGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR GCA 90 bp ATTAACACCCTGGCTGGGGTGGGGCCCTGTACTGTAGCCTTGGCCTTTCATTCACACTTATATATAGAATaGTTGTGCCCGTTGGCTCTC +
Preference number: 4 (lower is better)
Translates to: INTLAGVGPCTVALAFHSHLYIE*LCPLAL
Trigger: GAGAGCCAACGGGCACAAGCATTCTATATATAAGTG...TGAATGAAAGGCCAAGGCTACAGTACAGGGCCCCACCCCAGCCAGGGTGTTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR GCA 90 bp TCCAGTGACCTTGGAATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATTACACTTATATATAGAATaGTTGTGCCCGTTGGCTCTC +
Preference number: 4 (lower is better)
Translates to: SSDLGMQDLPEASTTWALHLYIE*LCPLAL
Trigger: GAGAGCCAACGGGCACAAGCATTCTATATATAAGTG...TAATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCATTCCAAGGTCACTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR GCA 90 bp TTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGGCCCTTAATTCTAAAGCCATCTTTCATTCCTTCTaGCTTCGGAAGGCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: LPWALLPAKAYKALNSKAIFHSF*LRKAGG
Trigger: GCCTCCTGCCTTCCGAAGGCAGAAGGAATGAAAGAT...GGCTTTAGAATTAAGGGCCTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR CCA 90 bp TATATAGAATGCTTGTGCCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTCCCTCACTGGTCTTTaGCTCTTGGGGAATTCAGTC +
Preference number: 4 (lower is better)
Translates to: YIECLCPLALVLTLGPLTSLTGL*LLGNSV
Trigger: GACTGAATTCCCCAAGAGCCAAAGACCAGTGAGGGA...GGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGGCACAAGCATTCTATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310585.4
CDS-3UTR CCA 90 bp AACATGAAGTCCCAGCTCTGTGGCAACCAGAGCCATCCTTTCTTCCACCTCCCGGACTATTCTGATGGCTaGCTAGCTCTTTCTCATTCT +
Preference number: 4 (lower is better)
Translates to: NMKSQLCGNQSHPFFHLPDYSDG*LALSHS
Trigger: AGAATGAGAAAGAGCTAGCCAGCCATCAGAATAGTC...CGGGAGGTGGAAGAAAGGATGGCTCTGGTTGCCACAGAGCTGGGACTTCATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310585.4
CDS-3UTR CCA 90 bp ATTAGGGGGCCAGGAAAAGGGTGGAGGGTACATGCTTTCATCATTCCAAAGCCTCTGTCCCATCTAGCCTaGCTCCAAACCTCAGCATTA +
Preference number: 4 (lower is better)
Translates to: IRGPGKGWRVHAFIIPKPLSHLA*LQTSAL
Trigger: TAATGCTGAGGTTTGGAGCCAGGCTAGATGGGACAG...AGGCTTTGGAATGATGAAAGCATGTACCCTCCACCCTTTTCCTGGCCCCCTAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310585.4
CDS-3UTR CCA 90 bp ATGAGCCACTTATATATAGAATGCTTGTGCCCGTTGGCTCTCGTTCTTACCTTGGCTTGGCTTCCGCGATaGCAAACTGCTCAGCCACTC +
Preference number: 4 (lower is better)
Translates to: MSHLYIECLCPLALVLTLAWLPR*QTAQPL
Trigger: GAGTGGCTGAGCAGTTTGCCATCGCGGAAGCCAAGC...CAAGGTAAGAACGAGAGCCAACGGGCACAAGCATTCTATATATAAGTGGCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp CACAACCATAAAAACGTACAGTCCAGTGACCTTGGAATGCAGGATCTGCCAGAGGGGCCAGGAAAAGGGTaGAGGGTACATGCTTTCATC +
Preference number: 4 (lower is better)
Translates to: HNHKNVQSSDLGMQDLPEGPGKG*RVHAFI
Trigger: GATGAAAGCATGTACCCTCCACCCTTTTCCTGGCCC...CTCTGGCAGATCCTGCATTCCAAGGTCACTGGACTGTACGTTTTTATGGTTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp CACAACCATAAAAACGTACAGTCCAGTGACCTTGGAATGCAGGATCTGCCAGAGCCTGTGGCCCTCTTGTaGCCCTCTCTAGAAGAACAT +
Preference number: 4 (lower is better)
Translates to: HNHKNVQSSDLGMQDLPEPVALL*PSLEEH
Trigger: ATGTTCTTCTAGAGAGGGCCACAAGAGGGCCACAGG...CTCTGGCAGATCCTGCATTCCAAGGTCACTGGACTGTACGTTTTTATGGTTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp CTTCCCACAACCATAAAAACGTACAGTCCAGTGACCTTGGAATGCAGGATCTGCTGGTCCTTCACCACCTaGGAAATACCATGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: LPTTIKTYSPVTLECRICWSFTT*EIPCRE
Trigger: CTCCCTGCATGGTATTTCCCAGGTGGTGAAGGACCA...GCAGATCCTGCATTCCAAGGTCACTGGACTGTACGTTTTTATGGTTGTGGGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340957.9
ENST00000383847.7
ENST00000639617.1
CDS-3UTR CCA 90 bp ATGAGCCACTTATATATAGAATGCTTGTGCCCGTTGGCTCTCGTTCTTACCTTGCCTTCCCTCCCAATCTaGGGCACCCCTCCTATTCCA +
Preference number: 4 (lower is better)
Translates to: MSHLYIECLCPLALVLTLPSLPI*GTPPIP
Trigger: TGGAATAGGAGGGGTGCCCCAGATTGGGAGGGAAGG...CAAGGTAAGAACGAGAGCCAACGGGCACAAGCATTCTATATATAAGTGGCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR CCA 90 bp AGTCCAGTGACCTTGGAATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATAGTACTGTCATGCCATaGGTGGAGAAATTTAGGAAA +
Preference number: 4 (lower is better)
Translates to: SPVTLECRICQRPPLRGHSTVMP*VEKFRK
Trigger: TTTCCTAAATTTCTCCACCCATGGCATGACAGTACT...ATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCATTCCAAGGTCACTGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639617.1
3UTR CAA 72 bp CTGCAAGCTGCATCTCAACAGAACTTGGGATGCTGCTaGGACCCTAGAAAAGGCAGACTGTATGAGAGGCAT +
Preference number: 4 (lower is better)
Translates to: LQAASQQNLGCC*DPRKGRLYERH
Trigger: ATGCCTCTCATACAGTCTGCCTTTTCTAGGGTCCAAGCAGCATCCCAAGTTCTGTTGAGATGCAGCTTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR TCA 90 bp CTAATGAGCCACTTATATATAGAATGCTTGTGCCCGTTGGCTCTCGTTCTTACCGAGACGATGGAGAGGTaGATGAAGCACAGCACGAGC +
Preference number: 4 (lower is better)
Translates to: LMSHLYIECLCPLALVLTETMER*MKHSTS
Trigger: GCTCGTGCTGTGCTTCATTCACCTCTCCATCGTCTC...GGTAAGAACGAGAGCCAACGGGCACAAGCATTCTATATATAAGTGGCTCATTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR TCA 90 bp CACAACCATAAAAACGTACAGTCCAGTGACCTTGGAATGCAGGATCTGCCAGAGCTCTCTAGAAGAACATaGAGTCCCAGCTCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: HNHKNVQSSDLGMQDLPELSRRT*SPSSVA
Trigger: TGCCACAGAGCTGGGACTTCATGTTCTTCTAGAGAG...CTCTGGCAGATCCTGCATTCCAAGGTCACTGGACTGTACGTTTTTATGGTTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR GCA 90 bp GTGGCCCTCTTGTGGCCCTCTCTAGAAGAACATGAAGTCCCAGCTCTGTGGCAACTCCAAACACTTTCATaGAAAACACACAACGGAGAA +
Preference number: 4 (lower is better)
Translates to: VALLWPSLEEHEVPALWQLQTLS*KTHNGE
Trigger: TTCTCCGTTGTGTGTTTTGCATGAAAGTGTTTGGAG...TTGCCACAGAGCTGGGACTTCATGTTCTTCTAGAGAGGGCCACAAGAGGGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
CDS-3UTR GCA 90 bp TTCTCACTGCTGGGAGTGGACCATGCTTATGTCACCAGTATTGGCAGACTCATTGGTGGCCTCCAAAGCTaGTCCACTTCCAAAAAGTCA +
Preference number: 4 (lower is better)
Translates to: FSLLGVDHAYVTSIGRLIGGLQS*STSKKS
Trigger: TGACTTTTTGGAAGTGGAGCAGCTTTGGAGGCCACC...AATGAGTCTGCCAATACTGGTGACATAAGCATGGTCCACTCCCAGCAGTGAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR CCA 90 bp TTAGGGGGCCAGGAAAAGGGTGGAGGGTACATGCTTTCATCATTCCAAAGCCTCAACGTACCCCATTTGTaGCCCTTAGTCATAGTGAGT +
Preference number: 4 (lower is better)
Translates to: LGGQEKGGGYMLSSFQSLNVPHL*PLVIVS
Trigger: ACTCACTATGACTAAGGGCCACAAATGGGGTACGTT...GAGGCTTTGGAATGATGAAAGCATGTACCCTCCACCCTTTTCCTGGCCCCCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310585.4
CDS-3UTR CCA 90 bp TCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGGCCCTTAATTCTAAAGAATGCTTGTGCCCGTTaGCTCTCGTTCTTACCTTGG +
Preference number: 4 (lower is better)
Translates to: SYLGPSYLPKPTRPLILKNACAR*LSFLPW
Trigger: CCAAGGTAAGAACGAGAGCCAACGGGCACAAGCATT...CTTTAGAATTAAGGGCCTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp GGCCCAAGTGCCCTTAAGGTCGGTGTGGGCTCTCCCTTCTCGGTATATCTGCAATATTGGCAGACTCATTaGAATCGTTACTCTAAAGGA +
Preference number: 4 (lower is better)
Translates to: GPSALKVGVGSPFSVYLQYWQTH*NRYSKG
Trigger: TCCTTTAGAGTAACGATTCCAATGAGTCTGCCAATA...TTGCAGATATACCGAGAAGGGAGAGCCCACACCGACCTTAAGGGCACTTGGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639617.1
3UTR CAA 72 bp CTAATGAGCCACTTATATATAGAATGCTTGTGCCCGTaGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGC +
Preference number: 4 (lower is better)
Translates to: LMSHLYIECLCP*ALVLTLGPLTC
Trigger: GCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGGCACAAGCATTCTATATATAAGTGGCTCATTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR TCA 90 bp CGGTGTGGGCTCTCCCTTCTCGGTATATCTGCAACTAAACAGGACTGGGGTTGTAACTGGAACCTCCAATaGCCAGATGTATATAGAGAT +
Preference number: 4 (lower is better)
Translates to: RCGLSLLGISATKQDWGCNWNLQ*PDVYRD
Trigger: ATCTCTATATACATCTGGTCATTGGAGGTTCCAGTT...ACAACCCCAGTCCTGTTTAGTTGCAGATATACCGAGAAGGGAGAGCCCACACCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR TCA 90 bp CACACTGCAGACTCACACTATCTTCTCACTGCTGGGAGTGGACCATGCTTATGTACTAGATTTCACGTGTaGACAGTTGTTCTGTCCCAC +
Preference number: 4 (lower is better)
Translates to: HTADSHYLLTAGSGPCLCTRFHV*TVVLSH
Trigger: GTGGGACAGAACAACTGTTCACACGTGAAATCTAGT...ACATAAGCATGGTCCACTCCCAGCAGTGAGAAGATAGTGTGAGTCTGCAGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR GCA 90 bp TCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGGCCCTTAATTCTAAAGTACTGCTACTGCCATTaGCCTTTCTCAAGCCCTCAA +
Preference number: 4 (lower is better)
Translates to: SYLGPSYLPKPTRPLILKYCYCH*PFSSPQ
Trigger: TTGAGGGCTTGAGAAAGGGCAATGGCAGTAGCAGTA...CTTTAGAATTAAGGGCCTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310585.4
CDS-3UTR GCA 90 bp TTAGGGGGCCAGGAAAAGGGTGGAGGGTACATGCTTTCATCATTCCAAAGCCTCTATATAGAATGCTTGTaGCCGTTGGCTCTCGTTCTT +
Preference number: 4 (lower is better)
Translates to: LGGQEKGGGYMLSSFQSLYIECL*PLALVL
Trigger: AAGAACGAGAGCCAACGGGCACAAGCATTCTATATA...GAGGCTTTGGAATGATGAAAGCATGTACCCTCCACCCTTTTCCTGGCCCCCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000639617.1
CDS-3UTR CCA 90 bp CTTCCCACAACCATAAAAACGTACAGTCCAGTGACCTTGGAATGCAGGATCTGCTGGTCCTTCACCACCTaGGAAATACCTTTAGCTGGA +
Preference number: 4 (lower is better)
Translates to: LPTTIKTYSPVTLECRICWSFTT*EIPLAG
Trigger: TCCAGCTAAAGGTATTTCCCAGGTGGTGAAGGACCA...GCAGATCCTGCATTCCAAGGTCACTGGACTGTACGTTTTTATGGTTGTGGGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418281.5
CDS-3UTR TCA 90 bp TTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGGCCCTTAATTCTAAAGCCGGCATTTTAAGAACATaGACATCACTGTCTGCCACA +
Preference number: 4 (lower is better)
Translates to: LPWALLPAKAYKALNSKAGILRT*TSLSAT
Trigger: TGTGGCAGACAGTGATGTTCATGTTCTTAAAATGCC...GGCTTTAGAATTAAGGGCCTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
CDS-3UTR TCA 90 bp CTAATGAGCCACTTATATATAGAATGCTTGTGCCCGTTGGCTCTCGTTCTTACCCTCTCTAGAAGAACATaGAGTCCCAGCTCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: LMSHLYIECLCPLALVLTLSRRT*SPSSVA
Trigger: TGCCACAGAGCTGGGACTTCATGTTCTTCTAGAGAG...GGTAAGAACGAGAGCCAACGGGCACAAGCATTCTATATATAAGTGGCTCATTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR GCA 90 bp CTAATGAGCCACTTATATATAGAATGCTTGTGCCCGTTGGCTCTCGTTCTTACCCCCTGTCCTTTCTACTaGTACTGCCATTGCCCTTTC +
Preference number: 4 (lower is better)
Translates to: LMSHLYIECLCPLALVLTPCPFY*YCHCPF
Trigger: GAAAGGGCAATGGCAGTAGCAGTAGAAAGGACAGGG...GGTAAGAACGAGAGCCAACGGGCACAAGCATTCTATATATAAGTGGCTCATTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310585.4
CDS-3UTR GCA 90 bp CAGGAAAAGGGTGGAGGGTACATGCTTTCATCATTCCAAAGCCTCCCAGAGAAGTATATAGAATGCTTGTaGCCGTTGGCTCTCGTTCTT +
Preference number: 4 (lower is better)
Translates to: QEKGGGYMLSSFQSLPEKYIECL*PLALVL
Trigger: AAGAACGAGAGCCAACGGGCACAAGCATTCTATATA...CTTCTCTGGGAGGCTTTGGAATGATGAAAGCATGTACCCTCCACCCTTTTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000639617.1
CDS-3UTR GCA 90 bp ATTAGGGGGCCAGGAAAAGGGTGGAGGGTACATGCTTTCATCATTCCAAAGCCTCACTTATATATAGAATaGTTGTGCCCGTTGGCTCTC +
Preference number: 4 (lower is better)
Translates to: IRGPGKGWRVHAFIIPKPHLYIE*LCPLAL
Trigger: GAGAGCCAACGGGCACAAGCATTCTATATATAAGTG...AGGCTTTGGAATGATGAAAGCATGTACCCTCCACCCTTTTCCTGGCCCCCTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000639617.1
CDS-3UTR GCA 90 bp CACAACCATAAAAACGTACAGTCCAGTGACCTTGGAATGCAGGATCTGCCAGAGCAACAGAACTTGGGATaGTGCTTGGACCCTAGAAAA +
Preference number: 4 (lower is better)
Translates to: HNHKNVQSSDLGMQDLPEQQNLG*CLDPRK
Trigger: TTTTCTAGGGTCCAAGCAGCATCCCAAGTTCTGTTG...CTCTGGCAGATCCTGCATTCCAAGGTCACTGGACTGTACGTTTTTATGGTTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR CCA 90 bp CTAATGAGCCACTTATATATAGAATGCTTGTGCCCGTTGGCTCTCGTTCTTACCCTCTCGTTCTTACCTTaGGCCCTCTTACCTGCCAAA +
Preference number: 4 (lower is better)
Translates to: LMSHLYIECLCPLALVLTLSFLP*ALLPAK
Trigger: TTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAG...GGTAAGAACGAGAGCCAACGGGCACAAGCATTCTATATATAAGTGGCTCATTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp ATGAGCCACTTATATATAGAATGCTTGTGCCCGTTGGCTCTCGTTCTTACCTTGAATGCTTGTGCCCGTTaGCTCTCGTTCTTACCTTGG +
Preference number: 4 (lower is better)
Translates to: MSHLYIECLCPLALVLTLNACAR*LSFLPW
Trigger: CCAAGGTAAGAACGAGAGCCAACGGGCACAAGCATT...CAAGGTAAGAACGAGAGCCAACGGGCACAAGCATTCTATATATAAGTGGCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CCA 90 bp TATCTTCTCACTGCTGGGAGTGGACCATGCTTATGTCACCAGTATTGGCAGACTGGGGTGGAACTAAGATaGGTTTATAACTGGAACCTC +
Preference number: 4 (lower is better)
Translates to: YLLTAGSGPCLCHQYWQTGVELR*VYNWNL
Trigger: GAGGTTCCAGTTATAAACCCATCTTAGTTCCACCCC...AGTCTGCCAATACTGGTGACATAAGCATGGTCCACTCCCAGCAGTGAGAAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR CCA 90 bp AATCGCTTTTCTCCCCACACTGCAGACTCACACTATCTTCTCACTGCTGGGAGTACTTCCAAAAAGTCATaGAGGCTTATGTCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: NRFSPHTADSHYLLTAGSTSKKS*RLMSSS
Trigger: TGAGCTGGACATAAGCCTCCATGACTTTTTGGAAGT...ACTCCCAGCAGTGAGAAGATAGTGTGAGTCTGCAGTGTGGGGAGAAAAGCGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR CCA 90 bp CTAATGAGCCACTTATATATAGAATGCTTGTGCCCGTTGGCTCTCGTTCTTACCTCTCACTGCTGGGAGTaGACCATGCTTATGTCACCA +
Preference number: 4 (lower is better)
Translates to: LMSHLYIECLCPLALVLTSHCWE*TMLMSP
Trigger: TGGTGACATAAGCATGGTCCACTCCCAGCAGTGAGA...GGTAAGAACGAGAGCCAACGGGCACAAGCATTCTATATATAAGTGGCTCATTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR CCA 90 bp GACCGTTGTCCTCCTGGACTGCAAGCTGCATCTCAACAGAACTTGGGATGCTGCAATTTAGGAAAGTTCTaGAAATCCCTCCCTAAAGAA +
Preference number: 4 (lower is better)
Translates to: DRCPPGLQAASQQNLGCCNLGKF*KSLPKE
Trigger: TTCTTTAGGGAGGGATTTCCAGAACTTTCCTAAATT...GCAGCATCCCAAGTTCTGTTGAGATGCAGCTTGCAGTCCAGGAGGACAACGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR GCA 90 bp CTAATGAGCCACTTATATATAGAATGCTTGTGCCCGTTGGCTCTCGTTCTTACCCGTCAGCCCAGAATGTaGATCTTTCATTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: LMSHLYIECLCPLALVLTRQPRM*IFHSFC
Trigger: GCAGAAGGAATGAAAGATGCACATTCTGGGCTGACG...GGTAAGAACGAGAGCCAACGGGCACAAGCATTCTATATATAAGTGGCTCATTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR TCA 90 bp CTTCCCACAACCATAAAAACGTACAGTCCAGTGACCTTGGAATGCAGGATCTGCAAGAGAAGATCCGACTaGAAAAACAGACCAAAAACC +
Preference number: 4 (lower is better)
Translates to: LPTTIKTYSPVTLECRICKRRSD*KNRPKT
Trigger: GGTTTTTGGTCTGTTTTTTCAGTCGGATCTTCTCTT...GCAGATCCTGCATTCCAAGGTCACTGGACTGTACGTTTTTATGGTTGTGGGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR TCA 90 bp CACAACCATAAAAACGTACAGTCCAGTGACCTTGGAATGCAGGATCTGCCAGAGAAGAGAAGATCCGACTaGAAAAACAGACCAAAAACC +
Preference number: 4 (lower is better)
Translates to: HNHKNVQSSDLGMQDLPEKRRSD*KNRPKT
Trigger: GGTTTTTGGTCTGTTTTTTCAGTCGGATCTTCTCTT...CTCTGGCAGATCCTGCATTCCAAGGTCACTGGACTGTACGTTTTTATGGTTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR TCA 90 bp ATGAGCCACTTATATATAGAATGCTTGTGCCCGTTGGCTCTCGTTCTTACCTTGAAGAGAAGATCCGACTaGAAAAACAGACCAAAAACC +
Preference number: 4 (lower is better)
Translates to: MSHLYIECLCPLALVLTLKRRSD*KNRPKT
Trigger: GGTTTTTGGTCTGTTTTTTCAGTCGGATCTTCTCTT...CAAGGTAAGAACGAGAGCCAACGGGCACAAGCATTCTATATATAAGTGGCTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
3UTR CAA 72 bp TCCTATTTCTCCGTCAGTGTAAGCAATATAAGGATTTaGAGTATCAAGTTCCTGAGGCCTGGACACAGAAAC +
Preference number: 4 (lower is better)
Translates to: SYFSVSVSNIRI*SIKFLRPGHRN
Trigger: GTTTCTGTGTCCAGGCCTCAGGAACTTGATACTCAAAATCCTTATATTGCTTACACTGACGGAGAAATAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS TCA 90 bp GCTCCACGGAGCCCTGGCGCACAGGCCGGGAGAACCGGTGGCCGGTaGACAGGTCCTGGAGGTGCGGCCCCAGGGGCAGCTGCCCAGCCA +
Preference number: 5 (lower is better)
Translates to: APRSPGAQAGRTGGR*TGPGGAAPGAAAQP
Trigger: TGGCTGGGCAGCTGCCCCTGGGGCCGCACCTCCAGGACCTGTTCACCGGCCACCGGTTCTCCCGGCCTGTGCGCCAGGGCTCCGTGGAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000418768.5
ENST00000450976.5
ENST00000453072.5
ENST00000639617.1
CDS GCA 90 bp CGAGAGCCGATACAGCCCATGGCCGGGCACCCAGGCACGCTAGCCTaGGCTCGGGGCGCGGGCCATCGCCTTGCAGAGGGTAGGGTCGCG +
Preference number: 5 (lower is better)
Translates to: REPIQPMAGHPGTLA*ARGAGHRLAEGRVA
Trigger: CGCGACCCTACCCTCTGCAAGGCGATGGCCCGCGCCCCGAGCGCAGGCTAGCGTGCCTGGGTGCCCGGCCATGGGCTGTATCGGCTCTCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340957.9
ENST00000418281.5
ENST00000433578.5
ENST00000450976.5
CDS TCA 90 bp CATCACCACGCAACAGGGTCTCCCGGGATACGGCCCGGGATGCGCTaGCGTCAGCGCGGAAGGCGCGAGCTCTCCGCCTGCTGGCACAGC +
Preference number: 5 (lower is better)
Translates to: HHHATGSPGIRPGMR*RQRGRRELSACWHS
Trigger: GCTGTGCCAGCAGGCGGAGAGCTCGCGCCTTCCGCGCTGACGTCAGCGCATCCCGGGCCGTATCCCGGGAGACCCTGTTGCGTGGTGATG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497070.1
CDS GCA 90 bp CAACCCATCACCACGCAACAGGGTCTCCCGGGATACGGCCCGGGATaGGCTGACGTCAGCGCGGAAGGCGCGAGCTCTCCGCCTGCTGGC +
Preference number: 5 (lower is better)
Translates to: QPITTQQGLPGYGPG*ADVSAEGASSPPAG
Trigger: GCCAGCAGGCGGAGAGCTCGCGCCTTCCGCGCTGACGTCAGCGCATCCCGGGCCGTATCCCGGGAGACCCTGTTGCGTGGTGATGGGTTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497070.1
CDS CCA 90 bp GGGGACACGGTCTGTGAGCAGTCGCTCTCAGGCTCCACGGAGCCCTaGCGCACAGGCCGGGAGAACCGGTGGCCGGTGAACAGGTCCTGG +
Preference number: 5 (lower is better)
Translates to: GDTVCEQSLSGSTEP*RTGRENRWPVNRSW
Trigger: CCAGGACCTGTTCACCGGCCACCGGTTCTCCCGGCCTGTGCGCCAGGGCTCCGTGGAGCCTGAGAGCGACTGCTCACAGACCGTGTCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000418768.5
ENST00000450976.5
ENST00000453072.5
ENST00000639617.1
CDS CCA 90 bp CCTGGGCCTCCAGTGGGCCCAGGCTGCGGAAGGCACTTTCCCGGCTaGGGGGCAGTTTGGCGAGAAGCAGCTCATCGCCCAGCAGCTGGG +
Preference number: 5 (lower is better)
Translates to: PGPPVGPGCGRHFPG*GAVWREAAHRPAAG
Trigger: CCCAGCTGCTGGGCGATGAGCTGCTTCTCGCCAAACTGCCCCCCAGCCGGGAAAGTGCCTTCCGCAGCCTGGGCCCACTGGAGGCCCAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000418768.5
ENST00000450976.5
ENST00000453072.5
ENST00000639617.1
CDS CCA 90 bp TGCCGCTGCCGTTCCCAGCTGCCCGTTAGTGGTGGGCAGAGTGGCTaGCAGTCCTTGCAGGGGGCTGGCTCCTCCTCCGCGGGGGAAAGG +
Preference number: 5 (lower is better)
Translates to: CRCRSQLPVSGGQSG*QSLQGAGSSSAGER
Trigger: CCTTTCCCCCGCGGAGGAGGAGCCAGCCCCCTGCAAGGACTGCCAGCCACTCTGCCCACCACTAACGGGCAGCTGGGAACGGCAGCGGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000450976.5
ENST00000453072.5
ENST00000639617.1
CDS-3UTR CAA 90 bp CCTCCCGCTCAGAGAGCTCTGCGTGAATGGGCAGCCCGGCTGGCTGTGAGGCGCGGCCAGGTCAGAGGCTaGCCGCTGCCGTTCCCAGCT +
Preference number: 5 (lower is better)
Translates to: PPAQRALREWAARLAVRRGQVRG*PLPFPA
Trigger: AGCTGGGAACGGCAGCGGCAAGCCTCTGACCTGGCC...GCGCCTCACAGCCAGCCGGGCTGCCCATTCACGCAGAGCTCTCTGAGCGGGAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
CDS TCA 90 bp CTTGACCTGAGGCCCACCCTCGATCCCTCCCCTTGGGTACCTGGCTaGCAGGGCCCCCAGGGTGGCGCCAGTAGCCTCCAGCCAGGCCTA +
Preference number: 5 (lower is better)
Translates to: LDLRPTLDPSPWVPG*QGPQGGASSLQPGL
Trigger: TAGGCCTGGCTGGAGGCTACTGGCGCCACCCTGGGGGCCCTGTCAGCCAGGTACCCAAGGGGAGGGATCGAGGGTGGGCCTCAGGTCAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497070.1
CDS GCA 90 bp CAGGAGCCAGCCCCAGGTCAGAGGCTTGCCGCTGCCGTTCCCAGCTaGCCGTTAGTGGTGGGCAGAGTGGCTGGCAGTCCTTGCAGGGGG +
Preference number: 5 (lower is better)
Translates to: QEPAPGQRLAAAVPS*PLVVGRVAGSPCRG
Trigger: CCCCCTGCAAGGACTGCCAGCCACTCTGCCCACCACTAACGGGCAGCTGGGAACGGCAGCGGCAAGCCTCTGACCTGGGGCTGGCTCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS TCA 90 bp CCGGGAGGGCAGGAGCCAGCCCTCTGTGAGGGGCGAGTTGTAGAGTaGGTCCTGGGCCTCCAGTGGGCCCAGGCTGCGGAAGGCACTTTC +
Preference number: 5 (lower is better)
Translates to: PGGQEPALCEGRVVE*VLGLQWAQAAEGTF
Trigger: GAAAGTGCCTTCCGCAGCCTGGGCCCACTGGAGGCCCAGGACTCACTCTACAACTCGCCCCTCACAGAGGGCTGGCTCCTGCCCTCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418281.5
CDS GCA 90 bp GTTCCCAGCTGCCCGTTAGTGGTGGGCAGAGTGGCTGGCAGTCCTTaGAGGGGGCTGGCTCCTCCTCCGCGGGGGAAAGGCAGGACTCTG +
Preference number: 5 (lower is better)
Translates to: VPSCPLVVGRVAGSP*RGLAPPPRGKGRTL
Trigger: CAGAGTCCTGCCTTTCCCCCGCGGAGGAGGAGCCAGCCCCCTGCAAGGACTGCCAGCCACTCTGCCCACCACTAACGGGCAGCTGGGAAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000450976.5
ENST00000453072.5
ENST00000639617.1
CDS GCA 90 bp CCCCAGAAGAGGCCAGGTCAGAGGCTTGCCGCTGCCGTTCCCAGCTaGCCGTTAGTGGTGGGCAGAGTGGCTGGCAGTCCTTGCAGGGGG +
Preference number: 5 (lower is better)
Translates to: PQKRPGQRLAAAVPS*PLVVGRVAGSPCRG
Trigger: CCCCCTGCAAGGACTGCCAGCCACTCTGCCCACCACTAACGGGCAGCTGGGAACGGCAGCGGCAAGCCTCTGACCTGGCCTCTTCTGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000450976.5
ENST00000453072.5
CDS GCA 90 bp CAGCCAGGCCTAGGCGGGGGAGCACCTGCTGGGTGTTTCTTAGCTTaGTCTCCCTCCCTCGCTTCGCTCCCCTCAGCCGCCGCCATCCGT +
Preference number: 5 (lower is better)
Translates to: QPGLGGGAPAGCFLA*SPSLASLPSAAAIR
Trigger: ACGGATGGCGGCGGCTGAGGGGAGCGAAGCGAGGGAGGGAGAGCAAGCTAAGAAACACCCAGCAGGTGCTCCCCCGCCTAGGCCTGGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453072.5
ENST00000497070.1
CDS-3UTR CAA 90 bp CCAGCACACTGCCCGCACATCCTAGGAGGGGTTGGGAAAGGGCCCAGGCCCCATAGGGCTCGCCGGGACTaGGGCAGCATCGCGACTGTG +
Preference number: 5 (lower is better)
Translates to: PAHCPHILGGVGKGPRPHRARRD*GSIATV
Trigger: CACAGTCGCGATGCTGCCCAAGTCCCGGCGAGCCCT...ATGGGGCCTGGGCCCTTTCCCAACCCCTCCTAGGATGTGCGGGCAGTGTGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000639617.1
CDS TCA 90 bp CAGGCTGCACAGACTAGAGCACAGGGTGTCTGGGGACACGGTCTGTaGGCAGTCGCTCTCAGGCTCCACGGAGCCCTGGCGCACAGGCCG +
Preference number: 5 (lower is better)
Translates to: QAAQTRAQGVWGHGL*AVALRLHGALAHRP
Trigger: CGGCCTGTGCGCCAGGGCTCCGTGGAGCCTGAGAGCGACTGCTCACAGACCGTGTCCCCAGACACCCTGTGCTCTAGTCTGTGCAGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000418768.5
ENST00000450976.5
ENST00000453072.5
ENST00000639617.1
CDS-3UTR CAA 90 bp AGCACGAGCCCAGCTGGGCAGGGGCCCTTGAGGGACGGCTCAACCCATAGGCTCGCTCTGCTGGGAGCCTaGAGCCCACACTTGGGCACA +
Preference number: 5 (lower is better)
Translates to: STSPAGQGPLRDGSTHRLALLGA*SPHLGT
Trigger: TGTGCCCAAGTGTGGGCTCAAGGCTCCCAGCAGAGC...GAGCCTATGGGTTGAGCCGTCCCTCAAGGGCCCCTGCCCAGCTGGGCTCGTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
CDS TCA 90 bp CTCCGCGGGGGAAAGGCAGGACTCTGTGAGGGGCGAGTTGTAGAGTaGGTCCTGGGCCTCCAGTGGGCCCAGGCTGCGGAAGGCACTTTC +
Preference number: 5 (lower is better)
Translates to: LRGGKAGLCEGRVVE*VLGLQWAQAAEGTF
Trigger: GAAAGTGCCTTCCGCAGCCTGGGCCCACTGGAGGCCCAGGACTCACTCTACAACTCGCCCCTCACAGAGTCCTGCCTTTCCCCCGCGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000450976.5
ENST00000453072.5
ENST00000639617.1
CDS-3UTR CAA 90 bp CCAGCACACTGCCCGCACATCCTAGGAGGGGTTGGGAAAGGGCCCAGGCCCCATGCCATGGCGGTAGGCTaGGTCACGTGGTCCTTCACC +
Preference number: 5 (lower is better)
Translates to: PAHCPHILGGVGKGPRPHAMAVG*VTWSFT
Trigger: GGTGAAGGACCACGTGACCAAGCCTACCGCCATGGC...ATGGGGCCTGGGCCCTTTCCCAACCCCTCCTAGGATGTGCGGGCAGTGTGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CAA 90 bp AGCACGAGCCCAGCTGGGCAGGGGCCCTTGAGGGACGGCTCAACCCATAGGCTCTGCAAAGCGAGCCTCTaGTTCGCCCTCGCTGAGGTC +
Preference number: 5 (lower is better)
Translates to: STSPAGQGPLRDGSTHRLCKASL*FALAEV
Trigger: GACCTCAGCGAGGGCGAACAAGAGGCTCGCTTTGCA...GAGCCTATGGGTTGAGCCGTCCCTCAAGGGCCCCTGCCCAGCTGGGCTCGTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
CDS-3UTR CAA 90 bp GATCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGCTGGGGTGGGGCGCCTTGAGCCCACACTaGGGCACAGAGGCTCTGCCC +
Preference number: 5 (lower is better)
Translates to: DLPEASTTWALTPWLGWGALSPH*GTEALP
Trigger: GGGCAGAGCCTCTGTGCCCAAGTGTGGGCTCAAGGC...GCCCCACCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
CDS-3UTR CAA 90 bp TGTGAGGCGCCAGCACACTGCCCGCACATCCTAGGAGGGGTTGGGAAAGGGCCCGCTCTGCTGGGAGCCTaGAGCCCACACTTGGGCACA +
Preference number: 5 (lower is better)
Translates to: CEAPAHCPHILGGVGKGPALLGA*SPHLGT
Trigger: TGTGCCCAAGTGTGGGCTCAAGGCTCCCAGCAGAGC...GGGCCCTTTCCCAACCCCTCCTAGGATGTGCGGGCAGTGTGCTGGCGCCTCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
CDS-3UTR CAA 90 bp GGCCTCCACTACGTGGGCATTAACACCCTGGCTGGGGTGGGGCCCTGTACTGTACCCCAGGTCAGAGGCTaGCCGCTGCCGTTCCCAGCT +
Preference number: 5 (lower is better)
Translates to: GLHYVGINTLAGVGPCTVPQVRG*PLPFPA
Trigger: AGCTGGGAACGGCAGCGGCAAGCCTCTGACCTGGGG...TACAGTACAGGGCCCCACCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS GCA 90 bp TCTAAGGACACCACCCCAGAAGAGGCCAGGTCAGAGGCTTGCCGCTaGCGTTCCCAGCTGCCCGTTAGTGGTGGGCAGAGTGGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: SKDTTPEEARSEACR*RSQLPVSGGQSGWQ
Trigger: CTGCCAGCCACTCTGCCCACCACTAACGGGCAGCTGGGAACGGCAGCGGCAAGCCTCTGACCTGGCCTCTTCTGGGGTGGTGTCCTTAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000450976.5
ENST00000453072.5
CDS GCA 90 bp CCACACTTGGGCACAGAGGCTCTGCCCCTGGCAGCAGCCGGGGGATaGATGCCACTGCCAGGCATGATGTGGGTCACTGTTCCTCTGGCT +
Preference number: 5 (lower is better)
Translates to: PHLGTEALPLAAAGG*MPLPGMMWVTVPLA
Trigger: AGCCAGAGGAACAGTGACCCACATCATGCCTGGCAGTGGCATGCATCCCCCGGCTGCTGCCAGGGGCAGAGCCTCTGTGCCCAAGTGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
CDS CCA 90 bp GGCTGCATACCATGCAGGGAGGACCTGGCCAGCGCAGCGATCTCCTaGATAGTTAGGGCTCGCCGGGACTTGGGCAGCATCGCGACTGTG +
Preference number: 5 (lower is better)
Translates to: GCIPCREDLASAAIS*IVRARRDLGSIATV
Trigger: CACAGTCGCGATGCTGCCCAAGTCCCGGCGAGCCCTAACTATCCAGGAGATCGCTGCGCTGGCCAGGTCCTCCCTGCATGGTATGCAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310585.4
CDS-3UTR CAA 90 bp CCCAGGAGCCCTCTAGGCTGTGGAGCTCTGCTGGGAGCCTTGAGCCCACACTTGGCCATGGCGGTAGGCTaGGTCACGTGGTCCTTCACC +
Preference number: 5 (lower is better)
Translates to: PRSPLGCGALLGALSPHLAMAVG*VTWSFT
Trigger: GGTGAAGGACCACGTGACCAAGCCTACCGCCATGGC...CAAGTGTGGGCTCAAGGCTCCCAGCAGAGCTCCACAGCCTAGAGGGCTCCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
CDS-3UTR CAA 90 bp TGTGAGGCGCCAGCACACTGCCCGCACATCCTAGGAGGGGTTGGGAAAGGGCCCGACCATGCTCGGAGCTaGGCTTCCGCGATGGCAAAC +
Preference number: 5 (lower is better)
Translates to: CEAPAHCPHILGGVGKGPDHARS*ASAMAN
Trigger: GTTTGCCATCGCGGAAGCCAAGCTCCGAGCATGGTC...GGGCCCTTTCCCAACCCCTCCTAGGATGTGCGGGCAGTGTGCTGGCGCCTCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CAA 90 bp CCTTTCTTCCACCTCCCGCTCAGAGAGCTCTGCGTGAATGGGCAGCCCGGCTGGGCTCTGCTGGGAGCCTaGAGCCCACACTTGGGCACA +
Preference number: 5 (lower is better)
Translates to: PFFHLPLRELCVNGQPGWALLGA*SPHLGT
Trigger: TGTGCCCAAGTGTGGGCTCAAGGCTCCCAGCAGAGC...CCAGCCGGGCTGCCCATTCACGCAGAGCTCTCTGAGCGGGAGGTGGAAGAAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
CDS TCA 90 bp TCTATCACGTTCCCGTCCCTCACAAGGGCAGCCAACACTGCCCCTTaGCCTGAGGCCCACCCTCGATCCCTCCCCTTGGGTACCTGGCTG +
Preference number: 5 (lower is better)
Translates to: SITFPSLTRAANTAP*PEAHPRSLPLGTWL
Trigger: CAGCCAGGTACCCAAGGGGAGGGATCGAGGGTGGGCCTCAGGTCAAGGGGCAGTGTTGGCTGCCCTTGTGAGGGACGGGAACGTGATAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497070.1
CDS GCA 90 bp TCCTCATCTAAGGACACCACCCCAGAAGAGGCCAGGTCAGAGGCTTaGCGCTGCCGTTCCCAGCTGCCCGTTAGTGGTGGGCAGAGTGGC +
Preference number: 5 (lower is better)
Translates to: SSSKDTTPEEARSEA*RCRSQLPVSGGQSG
Trigger: GCCACTCTGCCCACCACTAACGGGCAGCTGGGAACGGCAGCGGCAAGCCTCTGACCTGGCCTCTTCTGGGGTGGTGTCCTTAGATGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000450976.5
ENST00000453072.5
CDS-3UTR CAA 90 bp CCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGCTGGGGTGGGGCCCTGTATGCAAAGCGAGCCTCTaGTTCGCCCTCGCTGAGGTC +
Preference number: 5 (lower is better)
Translates to: PEASTTWALTPWLGWGPVCKASL*FALAEV
Trigger: GACCTCAGCGAGGGCGAACAAGAGGCTCGCTTTGCA...TACAGGGCCCCACCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CAA 90 bp GATCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGCTGGGGTGGGGCGACCATGCTCGGAGCTaGGCTTCCGCGATGGCAAAC +
Preference number: 5 (lower is better)
Translates to: DLPEASTTWALTPWLGWGDHARS*ASAMAN
Trigger: GTTTGCCATCGCGGAAGCCAAGCTCCGAGCATGGTC...GCCCCACCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CAA 90 bp TTCTTCCACCTCCCGCTCAGAGAGCTCTGCGTGAATGGGCAGCCCGGCTGGCTGGACCATGCTCGGAGCTaGGCTTCCGCGATGGCAAAC +
Preference number: 5 (lower is better)
Translates to: FFHLPLRELCVNGQPGWLDHARS*ASAMAN
Trigger: GTTTGCCATCGCGGAAGCCAAGCTCCGAGCATGGTC...CAGCCAGCCGGGCTGCCCATTCACGCAGAGCTCTCTGAGCGGGAGGTGGAAGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CAA 90 bp AACACCCTGGCTGGGGTGGGGCCCTGTACTGTAGCCTTGGCCTTTCATTCAGACGGCCAGGTCAGAGGCTaGCCGCTGCCGTTCCCAGCT +
Preference number: 5 (lower is better)
Translates to: NTLAGVGPCTVALAFHSDGQVRG*PLPFPA
Trigger: AGCTGGGAACGGCAGCGGCAAGCCTCTGACCTGGCC...GTCTGAATGAAAGGCCAAGGCTACAGTACAGGGCCCCACCCCAGCCAGGGTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
CDS GCA 90 bp CCTCTGGCAAGTCCTGACTGTCCACCGAGGAAGGGCGGGAGGACCTaGTCCAGCCTCGGAGGGTTCGAGCAGATCCCAAAGAGGATAGAG +
Preference number: 5 (lower is better)
Translates to: PLASPDCPPRKGGRT*SSLGGFEQIPKRIE
Trigger: CTCTATCCTCTTTGGGATCTGCTCGAACCCTCCGAGGCTGGAGCAGGTCCTCCCGCCCTTCCTCGGTGGACAGTCAGGACTTGCCAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383847.7
ENST00000450976.5
ENST00000497070.1
ENST00000639617.1
CDS CCA 90 bp TGGGAAATACCATGCAGGGAGGACCTGGCCAGCGCAGCGATCTCCTaGATAGTTAGGGCTCGCCGGGACTTGGGCAGCATCGCGACTGTG +
Preference number: 5 (lower is better)
Translates to: WEIPCREDLASAAIS*IVRARRDLGSIATV
Trigger: CACAGTCGCGATGCTGCCCAAGTCCCGGCGAGCCCTAACTATCCAGGAGATCGCTGCGCTGGCCAGGTCCTCCCTGCATGGTATTTCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340957.9
ENST00000383847.7
ENST00000418768.5
ENST00000433578.5
ENST00000450976.5
ENST00000453072.5
ENST00000639617.1
CDS-3UTR CAA 90 bp GGCCTCCACTACGTGGGCATTAACACCCTGGCTGGGGTGGGGCCCTGTACTGTAGACCATGCTCGGAGCTaGGCTTCCGCGATGGCAAAC +
Preference number: 5 (lower is better)
Translates to: GLHYVGINTLAGVGPCTVDHARS*ASAMAN
Trigger: GTTTGCCATCGCGGAAGCCAAGCTCCGAGCATGGTC...TACAGTACAGGGCCCCACCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CAA 90 bp CCTCCCGCTCAGAGAGCTCTGCGTGAATGGGCAGCCCGGCTGGCTGTGAGGCGCCCCTGTACTGTAGCCTaGGCCTTTCATTCAGACAGA +
Preference number: 5 (lower is better)
Translates to: PPAQRALREWAARLAVRRPCTVA*AFHSDR
Trigger: TCTGTCTGAATGAAAGGCCAAGGCTACAGTACAGGG...GCGCCTCACAGCCAGCCGGGCTGCCCATTCACGCAGAGCTCTCTGAGCGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CAA 90 bp TCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGCTGGGGTGGGGCCCGCTCTCGTTCTTACCTaGGGCCCTCTTACCTGCCAA +
Preference number: 5 (lower is better)
Translates to: SARGLHYVGINTLAGVGPALVLT*GPLTCQ
Trigger: TTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGC...GGGCCCCACCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CAA 90 bp AATGCTTGTGCCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCGCGGGCCATCGCCTaGCAGAGGGTAGGGTCGCGG +
Preference number: 5 (lower is better)
Translates to: NACARWLSFLPWALLPAKARAIA*QRVGSR
Trigger: CCGCGACCCTACCCTCTGCAAGGCGATGGCCCGCGC...TTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGGCACAAGCATT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340957.9
ENST00000418281.5
CDS CCA 90 bp CCCCTGGCAGCAGCCGGGGGATGCATGCCACTGCCAGGCATGATGTaGGTCACTGTTCCTCTGGCTCTGCCTCATCCTCATCTAAGGACA +
Preference number: 5 (lower is better)
Translates to: PLAAAGGCMPLPGMM*VTVPLALPHPHLRT
Trigger: TGTCCTTAGATGAGGATGAGGCAGAGCCAGAGGAACAGTGACCCACATCATGCCTGGCAGTGGCATGCATCCCCCGGCTGCTGCCAGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000450976.5
CDS-3UTR CAA 90 bp ATTAACACCCTGGCTGGGGTGGGGCCCTGTACTGTAGCCTTGGCCTTTCATTCAAGGGCTCGCCGGGACTaGGGCAGCATCGCGACTGTG +
Preference number: 5 (lower is better)
Translates to: INTLAGVGPCTVALAFHSRARRD*GSIATV
Trigger: CACAGTCGCGATGCTGCCCAAGTCCCGGCGAGCCCT...TGAATGAAAGGCCAAGGCTACAGTACAGGGCCCCACCCCAGCCAGGGTGTTAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000639617.1
CDS-3UTR CAA 90 bp ATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGCTGGGGTGCAAAGCGAGCCTCTaGTTCGCCCTCGCTGAGGTC +
Preference number: 5 (lower is better)
Translates to: MQDLPEASTTWALTPWLGCKASL*FALAEV
Trigger: GACCTCAGCGAGGGCGAACAAGAGGCTCGCTTTGCA...CCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CAA 90 bp CTTGGAATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGGCCTTGAGCCCACACTaGGGCACAGAGGCTCTGCCC +
Preference number: 5 (lower is better)
Translates to: LGMQDLPEASTTWALTPWALSPH*GTEALP
Trigger: GGGCAGAGCCTCTGTGCCCAAGTGTGGGCTCAAGGC...CCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCATTCCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
CDS CCA 90 bp CCCTGGGCCATGGCGGTAGGCTTGGTCACGTGGTCCTTCACCACCTaGGAAATACCTGGAGATAGGGGAGGGTGGAGAAGCCTGGTAAAG +
Preference number: 5 (lower is better)
Translates to: PWAMAVGLVTWSFTT*EIPGDRGGWRSLVK
Trigger: CTTTACCAGGCTTCTCCACCCTCCCCTATCTCCAGGTATTTCCCAGGTGGTGAAGGACCACGTGACCAAGCCTACCGCCATGGCCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310585.4
CDS-3UTR CAA 90 bp GCGCCAGCACACTGCCCGCACATCCTAGGAGGGGTTGGGAAAGGGCCCAGGCCCGGAATTCAGTCTGTTTaGGTCACTGTAGTGCCCAAT +
Preference number: 5 (lower is better)
Translates to: APAHCPHILGGVGKGPRPGIQSV*VTVVPN
Trigger: ATTGGGCACTACAGTGACCAAAACAGACTGAATTCC...GGGCCTGGGCCCTTTCCCAACCCCTCCTAGGATGTGCGGGCAGTGTGCTGGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310585.4
CDS-3UTR CAA 90 bp CTTGGAATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGGCCATGGCGGTAGGCTaGGTCACGTGGTCCTTCACC +
Preference number: 5 (lower is better)
Translates to: LGMQDLPEASTTWALTPWAMAVG*VTWSFT
Trigger: GGTGAAGGACCACGTGACCAAGCCTACCGCCATGGC...CCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCATTCCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CAA 90 bp GCTTGTGCCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCGACCATGCTCGGAGCTaGGCTTCCGCGATGGCAAAC +
Preference number: 5 (lower is better)
Translates to: ACARWLSFLPWALLPAKADHARS*ASAMAN
Trigger: GTTTGCCATCGCGGAAGCCAAGCTCCGAGCATGGTC...GGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGGCACAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CAA 90 bp TCCAGTGACCTTGGAATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATTAGCCTTGAGCCCACACTaGGGCACAGAGGCTCTGCCC +
Preference number: 5 (lower is better)
Translates to: SSDLGMQDLPEASTTWALALSPH*GTEALP
Trigger: GGGCAGAGCCTCTGTGCCCAAGTGTGGGCTCAAGGC...TAATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCATTCCAAGGTCACTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
CDS TCA 90 bp GCTCAGCCACTCCTGCTGCAAAGCGAGCCTCTTGTTCGCCCTCGCTaGGGTCTGAATAGGAGGAAAAGGCTGATTCCAGGGCAGCAGGTG +
Preference number: 5 (lower is better)
Translates to: AQPLLLQSEPLVRPR*GLNRRKRLIPGQQV
Trigger: CACCTGCTGCCCTGGAATCAGCCTTTTCCTCCTATTCAGACCTCAGCGAGGGCGAACAAGAGGCTCGCTTTGCAGCAGGAGTGGCTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000418768.5
ENST00000433578.5
ENST00000450976.5
ENST00000453072.5
ENST00000487702.1
ENST00000639617.1
CDS CCA 90 bp GCCCTTTCTCAAGCCCTCAATGCCTCCTGCCCAGGTCGGCAGAAGTaGTGTTCCCCCAGCCTCCTCCAATCCCATGCTATTTTCTCAGGC +
Preference number: 5 (lower is better)
Translates to: ALSQALNASCPGRQK*CSPSLLQSHAIFSG
Trigger: GCCTGAGAAAATAGCATGGGATTGGAGGAGGCTGGGGGAACACCACTTCTGCCGACCTGGGCAGGAGGCATTGAGGGCTTGAGAAAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310585.4
ENST00000497070.1
CDS CCA 90 bp CCTCCTCTTGGTCTTCCCATCCACATTCCGGCAGACTCGGCAAGATaGAAACCAAACCCCCACACCTTCTCCCCACGTCTGGCCCTGCTT +
Preference number: 5 (lower is better)
Translates to: PPLGLPIHIPADSAR*KPNPHTFSPRLALL
Trigger: AAGCAGGGCCAGACGTGGGGAGAAGGTGTGGGGGTTTGGTTTCCATCTTGCCGAGTCTGCCGGAATGTGGATGGGAAGACCAAGAGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310585.4
ENST00000497070.1
CDS-3UTR CAA 90 bp AGCACGAGCCCAGCTGGGCAGGGGCCCTTGAGGGACGGCTCAACCCATAGGCTCACTGGTCTTTGGCTCTaGGGGAATTCAGTCTGTTTT +
Preference number: 5 (lower is better)
Translates to: STSPAGQGPLRDGSTHRLTGLWL*GNSVCF
Trigger: AAAACAGACTGAATTCCCCAAGAGCCAAAGACCAGT...GAGCCTATGGGTTGAGCCGTCCCTCAAGGGCCCCTGCCCAGCTGGGCTCGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310585.4
CDS-3UTR CAA 90 bp GTGGCCCTCTTGTGGCCCTCTCTAGAAGAACATGAAGTCCCAGCTCTGTGGCAAGCCATGGCGGTAGGCTaGGTCACGTGGTCCTTCACC +
Preference number: 5 (lower is better)
Translates to: VALLWPSLEEHEVPALWQAMAVG*VTWSFT
Trigger: GGTGAAGGACCACGTGACCAAGCCTACCGCCATGGC...TTGCCACAGAGCTGGGACTTCATGTTCTTCTAGAGAGGGCCACAAGAGGGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CAA 90 bp CCTTGGAATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGTGCAAAGCGAGCCTCTaGTTCGCCCTCGCTGAGGTC +
Preference number: 5 (lower is better)
Translates to: PWNAGSARGLHYVGINTLCKASL*FALAEV
Trigger: GACCTCAGCGAGGGCGAACAAGAGGCTCGCTTTGCA...CAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCATTCCAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CAA 90 bp TTCTTCCACCTCCCGCTCAGAGAGCTCTGCGTGAATGGGCAGCCCGGCTGGCTGCCCTGTACTGTAGCCTaGGCCTTTCATTCAGACAGA +
Preference number: 5 (lower is better)
Translates to: FFHLPLRELCVNGQPGWLPCTVA*AFHSDR
Trigger: TCTGTCTGAATGAAAGGCCAAGGCTACAGTACAGGG...CAGCCAGCCGGGCTGCCCATTCACGCAGAGCTCTCTGAGCGGGAGGTGGAAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CAA 90 bp AGCCATCCTTTCTTCCACCTCCCGCTCAGAGAGCTCTGCGTGAATGGGCAGCCCGCTCTCGTTCTTACCTaGGGCCCTCTTACCTGCCAA +
Preference number: 5 (lower is better)
Translates to: SHPFFHLPLRELCVNGQPALVLT*GPLTCQ
Trigger: TTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGC...GGGCTGCCCATTCACGCAGAGCTCTCTGAGCGGGAGGTGGAAGAAAGGATGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CAA 90 bp CCTTGGAATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGTATTCCACACCAACCTaGTCCTGGGCCCCTGTGGCC +
Preference number: 5 (lower is better)
Translates to: PWNAGSARGLHYVGINTLYSTPT*SWAPVA
Trigger: GGCCACAGGGGCCCAGGACAAGGTTGGTGTGGAATA...CAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCATTCCAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR CAA 90 bp ACACCAACCTTGTCCTGGGCCCCTGTGGCCTGTCATTTAGAGCTGCCCCTCGTCTTCACGTGTGAACAGTaGTTCTGTCCCACGTCCCCC +
Preference number: 5 (lower is better)
Translates to: TPTLSWAPVACHLELPLVFTCEQ*FCPTSP
Trigger: GGGGGACGTGGGACAGAACAACTGTTCACACGTGAA...GACGAGGGGCAGCTCTAAATGACAGGCCACAGGGGCCCAGGACAAGGTTGGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR CAA 90 bp TGTGAGGCGCCAGCACACTGCCCGCACATCCTAGGAGGGGTTGGGAAAGGGCCCACTATGTCTGGCTTTTaGTGGAGACAGGGTTTCGCA +
Preference number: 5 (lower is better)
Translates to: CEAPAHCPHILGGVGKGPTMSGF*WRQGFA
Trigger: TGCGAAACCCTGTCTCCACAAAAAGCCAGACATAGT...GGGCCCTTTCCCAACCCCTCCTAGGATGTGCGGGCAGTGTGCTGGCGCCTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS TCA 90 bp ACGCTACTGTCCAGTGAGGTTAGTGCAGGCATCATACCCAGGCCCTaGAGGATCCCACTCTGTGACACCCTTGCCTCCTTCCAAGCCTCC +
Preference number: 5 (lower is better)
Translates to: TLLSSEVSAGIIPRP*RIPLCDTLASFQAS
Trigger: GGAGGCTTGGAAGGAGGCAAGGGTGTCACAGAGTGGGATCCTTCAGGGCCTGGGTATGATGCCTGCACTAACCTCACTGGACAGTAGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497070.1
CDS GCA 90 bp TGTCCTTTCTACTGCTACTGCCATTGCCCTTTCTCAAGCCCTCAATaGCTCCTGCCCAGGTCGGCAGAAGTGGTGTTCCCCCAGCCTCCT +
Preference number: 5 (lower is better)
Translates to: CPFYCYCHCPFSSPQ*LLPRSAEVVFPQPP
Trigger: AGGAGGCTGGGGGAACACCACTTCTGCCGACCTGGGCAGGAGGCATTGAGGGCTTGAGAAAGGGCAATGGCAGTAGCAGTAGAAAGGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310585.4
ENST00000497070.1
CDS GCA 90 bp CCACCTGCAAAGTCCCTGCTCCTACCCTGTCCTTTCTACTGCTACTaGCATTGCCCTTTCTCAAGCCCTCAATGCCTCCTGCCCAGGTCG +
Preference number: 5 (lower is better)
Translates to: PPAKSLLLPCPFYCY*HCPFSSPQCLLPRS
Trigger: CGACCTGGGCAGGAGGCATTGAGGGCTTGAGAAAGGGCAATGGCAGTAGCAGTAGAAAGGACAGGGTAGGAGCAGGGACTTTGCAGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310585.4
ENST00000497070.1
CDS-3UTR CAA 90 bp TGCCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAATGCAAAGCGAGCCTCTaGTTCGCCCTCGCTGAGGTC +
Preference number: 5 (lower is better)
Translates to: CPLALVLTLGPLTCQSLQCKASL*FALAEV
Trigger: GACCTCAGCGAGGGCGAACAAGAGGCTCGCTTTGCA...TTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CAA 90 bp GGCCTCCACTACGTGGGCATTAACACCCTGGCTGGGGTGGGGCCCTGTACTGTACCCTGTACTGTAGCCTaGGCCTTTCATTCAGACAGA +
Preference number: 5 (lower is better)
Translates to: GLHYVGINTLAGVGPCTVPCTVA*AFHSDR
Trigger: TCTGTCTGAATGAAAGGCCAAGGCTACAGTACAGGG...TACAGTACAGGGCCCCACCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CAA 90 bp ACACCAACCTTGTCCTGGGCCCCTGTGGCCTGTCATTTAGAGCTGCCCCTCGTCTACAGTCCAGTGACCTaGGAATGCAGGATCTGCCAG +
Preference number: 5 (lower is better)
Translates to: TPTLSWAPVACHLELPLVYSPVT*ECRICQ
Trigger: CTGGCAGATCCTGCATTCCAAGGTCACTGGACTGTA...GACGAGGGGCAGCTCTAAATGACAGGCCACAGGGGCCCAGGACAAGGTTGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR CAA 90 bp AACACCCTGGCTGGGGTGGGGCCCTGTACTGTAGCCTTGGCCTTTCATTCAGACGCTCTCGTTCTTACCTaGGGCCCTCTTACCTGCCAA +
Preference number: 5 (lower is better)
Translates to: NTLAGVGPCTVALAFHSDALVLT*GPLTCQ
Trigger: TTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGC...GTCTGAATGAAAGGCCAAGGCTACAGTACAGGGCCCCACCCCAGCCAGGGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CAA 90 bp ATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGCTGGGGGAATGCTTGTGCCCGTaGGCTCTCGTTCTTACCTTG +
Preference number: 5 (lower is better)
Translates to: MQDLPEASTTWALTPWLGECLCP*ALVLTL
Trigger: CAAGGTAAGAACGAGAGCCAACGGGCACAAGCATTC...CCCCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CAA 90 bp ACACCAACCTTGTCCTGGGCCCCTGTGGCCTGTCATTTAGAGCTGCCCCTCGTCGAATGCTTGTGCCCGTaGGCTCTCGTTCTTACCTTG +
Preference number: 5 (lower is better)
Translates to: TPTLSWAPVACHLELPLVECLCP*ALVLTL
Trigger: CAAGGTAAGAACGAGAGCCAACGGGCACAAGCATTC...GACGAGGGGCAGCTCTAAATGACAGGCCACAGGGGCCCAGGACAAGGTTGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR CAA 90 bp GTGGGCATTAACACCCTGGCTGGGGTGGGGCCCTGTACTGTAGCCTTGGCCTTTAGGACACTCTGCGACTaGTCTGACAAGTCCATCGTC +
Preference number: 5 (lower is better)
Translates to: VGINTLAGVGPCTVALAFRTLCD*SDKSIV
Trigger: GACGATGGACTTGTCAGACAAGTCGCAGAGTGTCCT...AAAGGCCAAGGCTACAGTACAGGGCCCCACCCCAGCCAGGGTGTTAATGCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383847.7
ENST00000639617.1
CDS-3UTR CAA 90 bp GCCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGCAGTCCCCTCCCCATTaGGAACCTGTGCCTAGTCAC +
Preference number: 5 (lower is better)
Translates to: ARWLSFLPWALLPAKAYKQSPPH*EPVPSH
Trigger: GTGACTAGGCACAGGTTCCAAATGGGGAGGGGACTG...CTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR CAA 90 bp ATTAACACCCTGGCTGGGGTGGGGCCCTGTACTGTAGCCTTGGCCTTTCATTCAAGCATTCTACCCGCCTaGGCCTCCCAGAGTGCTAGG +
Preference number: 5 (lower is better)
Translates to: INTLAGVGPCTVALAFHSSILPA*ASQSAR
Trigger: CCTAGCACTCTGGGAGGCCAAGGCGGGTAGAATGCT...TGAATGAAAGGCCAAGGCTACAGTACAGGGCCCCACCCCAGCCAGGGTGTTAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS CCA 90 bp GAGTGTTCTGGATGTGGCTCTGAAAGAATGCCAAGGTCTATCAGGTaGGTCCACCACAGCCCTAGCCCAGGATGTCCCTCACCTGTGTCC +
Preference number: 5 (lower is better)
Translates to: ECSGCGSERMPRSIR*VHHSPSPGCPSPVS
Trigger: GGACACAGGTGAGGGACATCCTGGGCTAGGGCTGTGGTGGACCCACCTGATAGACCTTGGCATTCTTTCAGAGCCACATCCAGAACACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487702.1
CDS-3UTR CAA 90 bp TTCTCACTGCTGGGAGTGGACCATGCTTATGTCACCAGTATTGGCAGACTCATTAGGGCTCGCCGGGACTaGGGCAGCATCGCGACTGTG +
Preference number: 5 (lower is better)
Translates to: FSLLGVDHAYVTSIGRLIRARRD*GSIATV
Trigger: CACAGTCGCGATGCTGCCCAAGTCCCGGCGAGCCCT...AATGAGTCTGCCAATACTGGTGACATAAGCATGGTCCACTCCCAGCAGTGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR CAA 90 bp CACAACCATAAAAACGTACAGTCCAGTGACCTTGGAATGCAGGATCTGCCAGAGGGCCAGGTCAGAGGCTaGCCGCTGCCGTTCCCAGCT +
Preference number: 5 (lower is better)
Translates to: HNHKNVQSSDLGMQDLPEGQVRG*PLPFPA
Trigger: AGCTGGGAACGGCAGCGGCAAGCCTCTGACCTGGCC...CTCTGGCAGATCCTGCATTCCAAGGTCACTGGACTGTACGTTTTTATGGTTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
CDS-3UTR CAA 90 bp AACACCCTGGCTGGGGTGGGGCCCTGTACTGTAGCCTTGGCCTTTCATTCAGACTACAGTCCAGTGACCTaGGAATGCAGGATCTGCCAG +
Preference number: 5 (lower is better)
Translates to: NTLAGVGPCTVALAFHSDYSPVT*ECRICQ
Trigger: CTGGCAGATCCTGCATTCCAAGGTCACTGGACTGTA...GTCTGAATGAAAGGCCAAGGCTACAGTACAGGGCCCCACCCCAGCCAGGGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CAA 90 bp CGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGGCCGCTCTCGTTCTTACCTaGGGCCCTCTTACCTGCCAA +
Preference number: 5 (lower is better)
Translates to: RWLSFLPWALLPAKAYKAALVLT*GPLTCQ
Trigger: TTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGC...GGCCTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CAA 90 bp AAAACACACAACGGAGAAGCGAGCGCTCCCAGGAGCCCTCTAGGCTGTGGAGCTGAATGCTTGTGCCCGTaGGCTCTCGTTCTTACCTTG +
Preference number: 5 (lower is better)
Translates to: KTHNGEASAPRSPLGCGAECLCP*ALVLTL
Trigger: CAAGGTAAGAACGAGAGCCAACGGGCACAAGCATTC...AGCTCCACAGCCTAGAGGGCTCCTGGGAGCGCTCGCTTCTCCGTTGTGTGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
CDS-3UTR CAA 90 bp TGTGAGGCGCCAGCACACTGCCCGCACATCCTAGGAGGGGTTGGGAAAGGGCCCTTATATATAGAATGCTaGTGCCCGTTGGCTCTCGTT +
Preference number: 5 (lower is better)
Translates to: CEAPAHCPHILGGVGKGPLYIEC*CPLALV
Trigger: AACGAGAGCCAACGGGCACAAGCATTCTATATATAA...GGGCCCTTTCCCAACCCCTCCTAGGATGTGCGGGCAGTGTGCTGGCGCCTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS GCA 90 bp CCCCTTGCAAAGGCTGAGAGTGTTCTGGATGTGGCTCTGAAAGAATaGCAAGGTCTATCAGGTGGGTCCACCACAGCCCTAGCCCAGGAT +
Preference number: 5 (lower is better)
Translates to: PLAKAESVLDVALKE*QGLSGGSTTALAQD
Trigger: ATCCTGGGCTAGGGCTGTGGTGGACCCACCTGATAGACCTTGGCATTCTTTCAGAGCCACATCCAGAACACTCTCAGCCTTTGCAAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487702.1
CDS CCA 90 bp CTGTGTCCATTCCCCCAGCAAAGTCCTCATCATAGGAGTCATCAGTaGAGTCCTCGCCATCCACCGAAGACCATGCTCGGAGCTTGGCTT +
Preference number: 5 (lower is better)
Translates to: LCPFPQQSPHHRSHQ*SPRHPPKTMLGAWL
Trigger: AAGCCAAGCTCCGAGCATGGTCTTCGGTGGATGGCGAGGACTCCACTGATGACTCCTATGATGAGGACTTTGCTGGGGGAATGGACACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000418768.5
ENST00000433578.5
ENST00000450976.5
ENST00000453072.5
ENST00000487702.1
ENST00000639617.1
CDS-3UTR CAA 90 bp CCCAGGAGCCCTCTAGGCTGTGGAGCTCTGCTGGGAGCCTTGAGCCCACACTTGGCTTGCCCATATCTGTaGATAAGACCTAATGATTCC +
Preference number: 5 (lower is better)
Translates to: PRSPLGCGALLGALSPHLACPYL*IRPNDS
Trigger: GGAATCATTAGGTCTTATCAACAGATATGGGCAAGC...CAAGTGTGGGCTCAAGGCTCCCAGCAGAGCTCCACAGCCTAGAGGGCTCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310585.4
CDS-3UTR CAA 90 bp TATATAGAATGCTTGTGCCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCGCCATGGCGGTAGGCTaGGTCACGTGGTCCTTCACC +
Preference number: 5 (lower is better)
Translates to: YIECLCPLALVLTLGPLTAMAVG*VTWSFT
Trigger: GGTGAAGGACCACGTGACCAAGCCTACCGCCATGGC...GGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGGCACAAGCATTCTATATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CAA 90 bp CCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGGTACAGTCCAGTGACCTaGGAATGCAGGATCTGCCAG +
Preference number: 5 (lower is better)
Translates to: PVGSRSYLGPSYLPKPTRYSPVT*ECRICQ
Trigger: CTGGCAGATCCTGCATTCCAAGGTCACTGGACTGTA...CCTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CAA 90 bp GCCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGTACAGTCCAGTGACCTaGGAATGCAGGATCTGCCAG +
Preference number: 5 (lower is better)
Translates to: ARWLSFLPWALLPAKAYKYSPVT*ECRICQ
Trigger: CTGGCAGATCCTGCATTCCAAGGTCACTGGACTGTA...CTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CAA 90 bp CTTTCATTCCTTCTGCCTTCGGAAGGCAGGAGGCAGCTACAGCTGGAGGCTGCAGGCATGCTGGCTGTGTaGATGCAGAGAACCAAAAGC +
Preference number: 5 (lower is better)
Translates to: LSFLLPSEGRRQLQLEAAGMLAV*MQRTKS
Trigger: GCTTTTGGTTCTCTGCATCAACACAGCCAGCATGCC...TGCAGCCTCCAGCTGTAGCTGCCTCCTGCCTTCCGAAGGCAGAAGGAATGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR CAA 90 bp GGCCTCCAAAGCTGCTCCACTTCCAAAAAGTCATGGAGGCTTATGTCCAGCTCAAGCCTCGGCCAGCTGTaGGTCCCCAGAAATGCTACC +
Preference number: 5 (lower is better)
Translates to: GLQSCSTSKKSWRLMSSSSLGQL*VPRNAT
Trigger: GGTAGCATTTCTGGGGACCAACAGCTGGCCGAGGCT...TGAGCTGGACATAAGCCTCCATGACTTTTTGGAAGTGGAGCAGCTTTGGAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS GCA 90 bp ATGATTCCACCTGCAAAGTCCCTGCTCCTACCCTGTCCTTTCTACTaGTACTGCCATTGCCCTTTCTCAAGCCCTCAATGCCTCCTGCCC +
Preference number: 5 (lower is better)
Translates to: MIPPAKSLLLPCPFY*YCHCPFSSPQCLLP
Trigger: GGGCAGGAGGCATTGAGGGCTTGAGAAAGGGCAATGGCAGTAGCAGTAGAAAGGACAGGGTAGGAGCAGGGACTTTGCAGGTGGAATCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310585.4
ENST00000497070.1
CDS GCA 90 bp AACAAAAACCCTTCTCCACCAATCCCTGTCAGCAAGCAGCCCGCCTaGCTCCAGGAAAAGGAACTCAGCTTTCCTCTGGGCCAAGAATGC +
Preference number: 5 (lower is better)
Translates to: NKNPSPPIPVSKQPA*LQEKELSFPLGQEC
Trigger: GCATTCTTGGCCCAGAGGAAAGCTGAGTTCCTTTTCCTGGAGGCAGGCGGGCTGCTTGCTGACAGGGATTGGTGGAGAAGGGTTTTTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497070.1
CDS-3UTR CAA 90 bp CGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGGCCCTCCCCTGGCTTTGCTaGCCCATATCTGTTGATAAG +
Preference number: 5 (lower is better)
Translates to: RWLSFLPWALLPAKAYKALPWLC*PISVDK
Trigger: CTTATCAACAGATATGGGCAAGCAAAGCCAGGGGAG...GGCCTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310585.4
CDS-3UTR CAA 90 bp CCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGGCCCTGTACTGTAGCCTaGGCCTTTCATTCAGACAGA +
Preference number: 5 (lower is better)
Translates to: PVGSRSYLGPSYLPKPTRPCTVA*AFHSDR
Trigger: TCTGTCTGAATGAAAGGCCAAGGCTACAGTACAGGG...CCTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CAA 90 bp ATTAACACCCTGGCTGGGGTGGGGCCCTGTACTGTAGCCTTGGCCTTTCATTCATACAGTCCAGTGACCTaGGAATGCAGGATCTGCCAG +
Preference number: 5 (lower is better)
Translates to: INTLAGVGPCTVALAFHSYSPVT*ECRICQ
Trigger: CTGGCAGATCCTGCATTCCAAGGTCACTGGACTGTA...TGAATGAAAGGCCAAGGCTACAGTACAGGGCCCCACCCCAGCCAGGGTGTTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CAA 90 bp TGCCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGAATGCTTGTGCCCGTaGGCTCTCGTTCTTACCTTG +
Preference number: 5 (lower is better)
Translates to: CPLALVLTLGPLTCQSLQECLCP*ALVLTL
Trigger: CAAGGTAAGAACGAGAGCCAACGGGCACAAGCATTC...TTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CAA 90 bp ATTAACACCCTGGCTGGGGTGGGGCCCTGTACTGTAGCCTTGGCCTTTCATTCAAGGACACTCTGCGACTaGTCTGACAAGTCCATCGTC +
Preference number: 5 (lower is better)
Translates to: INTLAGVGPCTVALAFHSRTLCD*SDKSIV
Trigger: GACGATGGACTTGTCAGACAAGTCGCAGAGTGTCCT...TGAATGAAAGGCCAAGGCTACAGTACAGGGCCCCACCCCAGCCAGGGTGTTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383847.7
ENST00000639617.1
CDS-3UTR CAA 90 bp CCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAAGGAACTTGGGATGCTGCTaGGACCCTAGAAAAGGCAGA +
Preference number: 5 (lower is better)
Translates to: PVGSRSYLGPSYLPKPTRNLGCC*DPRKGR
Trigger: TCTGCCTTTTCTAGGGTCCAAGCAGCATCCCAAGTT...CCTTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS CCA 90 bp CCTGACCTCTTTCCTTTGCATCACCCACCACTGTCCCATCTAGCCTaGCTCCAAACCTCAGCATTACCATCAATTCTCCCCTGGCTTTGC +
Preference number: 5 (lower is better)
Translates to: PDLFPLHHPPLSHLA*LQTSALPSILPWLC
Trigger: GCAAAGCCAGGGGAGAATTGATGGTAATGCTGAGGTTTGGAGCCAGGCTAGATGGGACAGTGGTGGGTGATGCAAAGGAAAGAGGTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310585.4
ENST00000497070.1
CDS-3UTR CAA 90 bp CTCTTGTGGCCCTCTCTAGAAGAACATGAAGTCCCAGCTCTGTGGCAACCAGAGGGCATGCTGGCTGTGTaGATGCAGAGAACCAAAAGC +
Preference number: 5 (lower is better)
Translates to: LLWPSLEEHEVPALWQPEGMLAV*MQRTKS
Trigger: GCTTTTGGTTCTCTGCATCAACACAGCCAGCATGCC...CTCTGGTTGCCACAGAGCTGGGACTTCATGTTCTTCTAGAGAGGGCCACAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383847.7
ENST00000639617.1
CDS-3UTR CAA 90 bp CTAATGAGCCACTTATATATAGAATGCTTGTGCCCGTTGGCTCTCGTTCTTACCCCCTGGCAGGATGGGTaGGGGTCACTTGACCCCTGC +
Preference number: 5 (lower is better)
Translates to: LMSHLYIECLCPLALVLTPWQDG*GSLDPC
Trigger: GCAGGGGTCAAGTGACCCCAACCCATCCTGCCAGGG...GGTAAGAACGAGAGCCAACGGGCACAAGCATTCTATATATAAGTGGCTCATTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR CAA 90 bp ATAAAAACGTACAGTCCAGTGACCTTGGAATGCAGGATCTGCCAGAGGCCTCCAGCTCTCGTTCTTACCTaGGGCCCTCTTACCTGCCAA +
Preference number: 5 (lower is better)
Translates to: IKTYSPVTLECRICQRPPALVLT*GPLTCQ
Trigger: TTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGC...TGGAGGCCTCTGGCAGATCCTGCATTCCAAGGTCACTGGACTGTACGTTTTTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CAA 90 bp AACACCCTGGCTGGGGTGGGGCCCTGTACTGTAGCCTTGGCCTTTCATTCAGACTTATATATAGAATGCTaGTGCCCGTTGGCTCTCGTT +
Preference number: 5 (lower is better)
Translates to: NTLAGVGPCTVALAFHSDLYIEC*CPLALV
Trigger: AACGAGAGCCAACGGGCACAAGCATTCTATATATAA...GTCTGAATGAAAGGCCAAGGCTACAGTACAGGGCCCCACCCCAGCCAGGGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CAA 90 bp CAGGAAAAGGGTGGAGGGTACATGCTTTCATCATTCCAAAGCCTCCCAGAGAAGCTCCCTCACTGGTCTTaGGCTCTTGGGGAATTCAGT +
Preference number: 5 (lower is better)
Translates to: QEKGGGYMLSSFQSLPEKLPHWS*ALGEFS
Trigger: ACTGAATTCCCCAAGAGCCAAAGACCAGTGAGGGAG...CTTCTCTGGGAGGCTTTGGAATGATGAAAGCATGTACCCTCCACCCTTTTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310585.4
CDS-3UTR CAA 90 bp CTTCCCACAACCATAAAAACGTACAGTCCAGTGACCTTGGAATGCAGGATCTGCCCCTTGCTCCTCCTCTaGGTCTTCCCATCCACATTC +
Preference number: 5 (lower is better)
Translates to: LPTTIKTYSPVTLECRICPLLLL*VFPSTF
Trigger: GAATGTGGATGGGAAGACCAAGAGGAGGAGCAAGGG...GCAGATCCTGCATTCCAAGGTCACTGGACTGTACGTTTTTATGGTTGTGGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310585.4
CDS-3UTR CAA 90 bp TATATAGAATGCTTGTGCCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCGAATGCTTGTGCCCGTaGGCTCTCGTTCTTACCTTG +
Preference number: 5 (lower is better)
Translates to: YIECLCPLALVLTLGPLTECLCP*ALVLTL
Trigger: CAAGGTAAGAACGAGAGCCAACGGGCACAAGCATTC...GGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGGCACAAGCATTCTATATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CAA 90 bp CTTGGAATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATTAACACCCTGGTTATATATAGAATGCTaGTGCCCGTTGGCTCTCGTT +
Preference number: 5 (lower is better)
Translates to: LGMQDLPEASTTWALTPWLYIEC*CPLALV
Trigger: AACGAGAGCCAACGGGCACAAGCATTCTATATATAA...CCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCATTCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CAA 90 bp GTGGCCCTCTTGTGGCCCTCTCTAGAAGAACATGAAGTCCCAGCTCTGTGGCAACTTATGTCACCAGTATaGGCAGACTCATTGGAATCG +
Preference number: 5 (lower is better)
Translates to: VALLWPSLEEHEVPALWQLMSPV*ADSLES
Trigger: CGATTCCAATGAGTCTGCCAATACTGGTGACATAAG...TTGCCACAGAGCTGGGACTTCATGTTCTTCTAGAGAGGGCCACAAGAGGGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR CAA 90 bp TCCAGTGACCTTGGAATGCAGGATCTGCCAGAGGCCTCCACTACGTGGGCATTATCTCCAACATTCACCTaGGGTAACACCATTAGAAAG +
Preference number: 5 (lower is better)
Translates to: SSDLGMQDLPEASTTWALSPTFT*GNTIRK
Trigger: CTTTCTAATGGTGTTACCCAAGGTGAATGTTGGAGA...TAATGCCCACGTAGTGGAGGCCTCTGGCAGATCCTGCATTCCAAGGTCACTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310585.4
CDS-3UTR CAA 90 bp TGCCCGTTGGCTCTCGTTCTTACCTTGGGCCCTCTTACCTGCCAAAGCCTACAATTATATATAGAATGCTaGTGCCCGTTGGCTCTCGTT +
Preference number: 5 (lower is better)
Translates to: CPLALVLTLGPLTCQSLQLYIEC*CPLALV
Trigger: AACGAGAGCCAACGGGCACAAGCATTCTATATATAA...TTGTAGGCTTTGGCAGGTAAGAGGGCCCAAGGTAAGAACGAGAGCCAACGGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS-3UTR CAA 90 bp ATAAAAACGTACAGTCCAGTGACCTTGGAATGCAGGATCTGCCAGAGGCCTCCAAGTTCTATTCCTGTTTaGGCTCCGGATGCTGAGCCA +
Preference number: 5 (lower is better)
Translates to: IKTYSPVTLECRICQRPPSSIPV*APDAEP
Trigger: TGGCTCAGCATCCGGAGCCAAAACAGGAATAGAACT...TGGAGGCCTCTGGCAGATCCTGCATTCCAAGGTCACTGGACTGTACGTTTTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR CAA 90 bp CTTCCCACAACCATAAAAACGTACAGTCCAGTGACCTTGGAATGCAGGATCTGCGCATCTCAACAGAACTaGGGATGCTGCTTGGACCCT +
Preference number: 5 (lower is better)
Translates to: LPTTIKTYSPVTLECRICASQQN*GCCLDP
Trigger: AGGGTCCAAGCAGCATCCCAAGTTCTGTTGAGATGC...GCAGATCCTGCATTCCAAGGTCACTGGACTGTACGTTTTTATGGTTGTGGGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS-3UTR CAA 90 bp TTAGGGGGCCAGGAAAAGGGTGGAGGGTACATGCTTTCATCATTCCAAAGCCTCATTTCCTGTTTCTTGTaGGTCTCCCTCACTGGTCTT +
Preference number: 5 (lower is better)
Translates to: LGGQEKGGGYMLSSFQSLISCFL*VSLTGL
Trigger: AAGACCAGTGAGGGAGACCAACAAGAAACAGGAAAT...GAGGCTTTGGAATGATGAAAGCATGTACCCTCCACCCTTTTCCTGGCCCCCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310585.4
CDS-3UTR CAA 90 bp CACAACCATAAAAACGTACAGTCCAGTGACCTTGGAATGCAGGATCTGCCAGAGCCCTGTACTGTAGCCTaGGCCTTTCATTCAGACAGA +
Preference number: 5 (lower is better)
Translates to: HNHKNVQSSDLGMQDLPEPCTVA*AFHSDR
Trigger: TCTGTCTGAATGAAAGGCCAAGGCTACAGTACAGGG...CTCTGGCAGATCCTGCATTCCAAGGTCACTGGACTGTACGTTTTTATGGTTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS TCA 90 bp AAAAGGAACTCAGCTTTCCTCTGGGCCAAGAATGCCATCCTTACGTaGAAAAATGCTTGCCATCACTTAAGGCCCATCTCAAGTGTCACC +
Preference number: 5 (lower is better)
Translates to: KRNSAFLWAKNAILT*KNACHHLRPISSVT
Trigger: GGTGACACTTGAGATGGGCCTTAAGTGATGGCAAGCATTTTTTCACGTAAGGATGGCATTCTTGGCCCAGAGGAAAGCTGAGTTCCTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497070.1
CDS GCA 90 bp GGCTCCAAACCTCAGCATTACCATCAATTCTCCCCTGGCTTTGCTTaGCCATATCTGTTGATAAGACCTAATGATTCCACCTGCAAAGTC +
Preference number: 5 (lower is better)
Translates to: GSKPQHYHQFSPGFA*PYLLIRPNDSTCKV
Trigger: GACTTTGCAGGTGGAATCATTAGGTCTTATCAACAGATATGGGCAAGCAAAGCCAGGGGAGAATTGATGGTAATGCTGAGGTTTGGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310585.4
ENST00000497070.1
CDS GCA 90 bp CCCCATTTGTGGCCCTTAGTCATAGTGAGTAATAATGGTCTCTTTTaGATTTCCTGTTTCTTGTTGGTCTCCCTCACTGGTCTTTGGCTC +
Preference number: 5 (lower is better)
Translates to: PHLWPLVIVSNNGLF*ISCFLLVSLTGLWL
Trigger: GAGCCAAAGACCAGTGAGGGAGACCAACAAGAAACAGGAAATGCAAAAGAGACCATTATTACTCACTATGACTAAGGGCCACAAATGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310585.4
ENST00000497070.1
CDS-3UTR CAA 90 bp CTAATGAGCCACTTATATATAGAATGCTTGTGCCCGTTGGCTCTCGTTCTTACCTTATATATAGAATGCTaGTGCCCGTTGGCTCTCGTT +
Preference number: 5 (lower is better)
Translates to: LMSHLYIECLCPLALVLTLYIEC*CPLALV
Trigger: AACGAGAGCCAACGGGCACAAGCATTCTATATATAA...GGTAAGAACGAGAGCCAACGGGCACAAGCATTCTATATATAAGTGGCTCATTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000639617.1
CDS TCA 72 bp GCAACAGGGTCTCCCGGGATACGGCCCGGGATGCGCTaGCGTCAGCGCGGAAGGCGCGAGCTCTCCGCCTGC +
Preference number: 6 (lower is better)
Translates to: ATGSPGIRPGMR*RQRGRRELSAC
Trigger: GCAGGCGGAGAGCTCGCGCCTTCCGCGCTGACGTCAGCGCATCCCGGGCCGTATCCCGGGAGACCCTGTTGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497070.1
CDS GCA 72 bp ATACAGCCCATGGCCGGGCACCCAGGCACGCTAGCCTaGGCTCGGGGCGCGGGCCATCGCCTTGCAGAGGGT +
Preference number: 6 (lower is better)
Translates to: IQPMAGHPGTLA*ARGAGHRLAEG
Trigger: ACCCTCTGCAAGGCGATGGCCCGCGCCCCGAGCGCAGGCTAGCGTGCCTGGGTGCCCGGCCATGGGCTGTAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340957.9
ENST00000418281.5
ENST00000433578.5
ENST00000450976.5
CDS GCA 72 bp ACCACGCAACAGGGTCTCCCGGGATACGGCCCGGGATaGGCTGACGTCAGCGCGGAAGGCGCGAGCTCTCCG +
Preference number: 6 (lower is better)
Translates to: TTQQGLPGYGPG*ADVSAEGASSP
Trigger: CGGAGAGCTCGCGCCTTCCGCGCTGACGTCAGCGCATCCCGGGCCGTATCCCGGGAGACCCTGTTGCGTGGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497070.1
CDS CAA 90 bp CCAGCCAGGCCTAGGCGGGGGAGCACCTGCTGGGTGTTTCTTAGCTaGCTCTCCCTCCCTCGCTTCGCTCCCCTCAGCCGCCGCCATCCG +
Preference number: 6 (lower is better)
Translates to: PARPRRGSTCWVFLS*LSLPRFAPLSRRHP
Trigger: CGGATGGCGGCGGCTGAGGGGAGCGAAGCGAGGGAGGGAGAGCAAGCTAAGAAACACCCAGCAGGTGCTCCCCCGCCTAGGCCTGGCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453072.5
ENST00000497070.1
CDS GCA 72 bp TGCCCGTTAGTGGTGGGCAGAGTGGCTGGCAGTCCTTaGAGGGGGCTGGCTCCTCCTCCGCGGGGGAAAGGC +
Preference number: 6 (lower is better)
Translates to: CPLVVGRVAGSP*RGLAPPPRGKG
Trigger: GCCTTTCCCCCGCGGAGGAGGAGCCAGCCCCCTGCAAGGACTGCCAGCCACTCTGCCCACCACTAACGGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000450976.5
ENST00000453072.5
ENST00000639617.1
CDS CCA 72 bp GTCTGTGAGCAGTCGCTCTCAGGCTCCACGGAGCCCTaGCGCACAGGCCGGGAGAACCGGTGGCCGGTGAAC +
Preference number: 6 (lower is better)
Translates to: VCEQSLSGSTEP*RTGRENRWPVN
Trigger: GTTCACCGGCCACCGGTTCTCCCGGCCTGTGCGCCAGGGCTCCGTGGAGCCTGAGAGCGACTGCTCACAGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000418768.5
ENST00000450976.5
ENST00000453072.5
ENST00000639617.1
CDS CCA 72 bp CGTTCCCAGCTGCCCGTTAGTGGTGGGCAGAGTGGCTaGCAGTCCTTGCAGGGGGCTGGCTCCTCCTCCGCG +
Preference number: 6 (lower is better)
Translates to: RSQLPVSGGQSG*QSLQGAGSSSA
Trigger: CGCGGAGGAGGAGCCAGCCCCCTGCAAGGACTGCCAGCCACTCTGCCCACCACTAACGGGCAGCTGGGAACG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000450976.5
ENST00000453072.5
ENST00000639617.1
CDS GCA 72 bp GCCCCAGGTCAGAGGCTTGCCGCTGCCGTTCCCAGCTaGCCGTTAGTGGTGGGCAGAGTGGCTGGCAGTCCT +
Preference number: 6 (lower is better)
Translates to: APGQRLAAAVPS*PLVVGRVAGSP
Trigger: AGGACTGCCAGCCACTCTGCCCACCACTAACGGGCAGCTGGGAACGGCAGCGGCAAGCCTCTGACCTGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS CCA 72 bp CCAGTGGGCCCAGGCTGCGGAAGGCACTTTCCCGGCTaGGGGGCAGTTTGGCGAGAAGCAGCTCATCGCCCA +
Preference number: 6 (lower is better)
Translates to: PVGPGCGRHFPG*GAVWREAAHRP
Trigger: TGGGCGATGAGCTGCTTCTCGCCAAACTGCCCCCCAGCCGGGAAAGTGCCTTCCGCAGCCTGGGCCCACTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000418768.5
ENST00000450976.5
ENST00000453072.5
ENST00000639617.1
CDS CCA 72 bp TGGTGGGCAGAGTGGCTGGCAGTCCTTGCAGGGGGCTaGCTCCTCCTCCGCGGGGGAAAGGCAGGACTCTGT +
Preference number: 6 (lower is better)
Translates to: WWAEWLAVLAGG*LLLRGGKAGLC
Trigger: ACAGAGTCCTGCCTTTCCCCCGCGGAGGAGGAGCCAGCCCCCTGCAAGGACTGCCAGCCACTCTGCCCACCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000450976.5
ENST00000453072.5
ENST00000639617.1
CDS TCA 72 bp CAGGAGCCAGCCCTCTGTGAGGGGCGAGTTGTAGAGTaGGTCCTGGGCCTCCAGTGGGCCCAGGCTGCGGAA +
Preference number: 6 (lower is better)
Translates to: QEPALCEGRVVE*VLGLQWAQAAE
Trigger: TTCCGCAGCCTGGGCCCACTGGAGGCCCAGGACTCACTCTACAACTCGCCCCTCACAGAGGGCTGGCTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418281.5
CDS GCA 72 bp AGGCCAGGTCAGAGGCTTGCCGCTGCCGTTCCCAGCTaGCCGTTAGTGGTGGGCAGAGTGGCTGGCAGTCCT +
Preference number: 6 (lower is better)
Translates to: RPGQRLAAAVPS*PLVVGRVAGSP
Trigger: AGGACTGCCAGCCACTCTGCCCACCACTAACGGGCAGCTGGGAACGGCAGCGGCAAGCCTCTGACCTGGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000450976.5
ENST00000453072.5
CDS GCA 72 bp CTAGGCGGGGGAGCACCTGCTGGGTGTTTCTTAGCTTaGTCTCCCTCCCTCGCTTCGCTCCCCTCAGCCGCC +
Preference number: 6 (lower is better)
Translates to: LGGGAPAGCFLA*SPSLASLPSAA
Trigger: GGCGGCTGAGGGGAGCGAAGCGAGGGAGGGAGAGCAAGCTAAGAAACACCCAGCAGGTGCTCCCCCGCCTAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453072.5
ENST00000497070.1
CDS CAA 72 bp CCTAGGCGGGGGAGCACCTGCTGGGTGTTTCTTAGCTaGCTCTCCCTCCCTCGCTTCGCTCCCCTCAGCCGC +
Preference number: 6 (lower is better)
Translates to: PRRGSTCWVFLS*LSLPRFAPLSR
Trigger: GCGGCTGAGGGGAGCGAAGCGAGGGAGGGAGAGCAAGCTAAGAAACACCCAGCAGGTGCTCCCCCGCCTAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453072.5
ENST00000497070.1
CDS TCA 72 bp CAGACTAGAGCACAGGGTGTCTGGGGACACGGTCTGTaGGCAGTCGCTCTCAGGCTCCACGGAGCCCTGGCG +
Preference number: 6 (lower is better)
Translates to: QTRAQGVWGHGL*AVALRLHGALA
Trigger: CGCCAGGGCTCCGTGGAGCCTGAGAGCGACTGCTCACAGACCGTGTCCCCAGACACCCTGTGCTCTAGTCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000418768.5
ENST00000450976.5
ENST00000453072.5
ENST00000639617.1
CDS TCA 72 bp CTGGCTCCTCCTCCGCGGGGGAAAGGCAGGACTCTGTaGGGGGCGAGTTGTAGAGTGAGTCCTGGGCCTCCA +
Preference number: 6 (lower is better)
Translates to: LAPPPRGKGRTL*GASCRVSPGPP
Trigger: TGGAGGCCCAGGACTCACTCTACAACTCGCCCCTCACAGAGTCCTGCCTTTCCCCCGCGGAGGAGGAGCCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000450976.5
ENST00000453072.5
ENST00000639617.1
CDS TCA 72 bp TTCCCGTCCCTCACAAGGGCAGCCAACACTGCCCCTTaGCCTGAGGCCCACCCTCGATCCCTCCCCTTGGGT +
Preference number: 6 (lower is better)
Translates to: FPSLTRAANTAP*PEAHPRSLPLG
Trigger: ACCCAAGGGGAGGGATCGAGGGTGGGCCTCAGGTCAAGGGGCAGTGTTGGCTGCCCTTGTGAGGGACGGGAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497070.1
CDS GCA 72 bp ACCACCCCAGAAGAGGCCAGGTCAGAGGCTTGCCGCTaGCGTTCCCAGCTGCCCGTTAGTGGTGGGCAGAGT +
Preference number: 6 (lower is better)
Translates to: TTPEEARSEACR*RSQLPVSGGQS
Trigger: ACTCTGCCCACCACTAACGGGCAGCTGGGAACGGCAGCGGCAAGCCTCTGACCTGGCCTCTTCTGGGGTGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000450976.5
ENST00000453072.5
CDS GCA 72 bp GGCACAGAGGCTCTGCCCCTGGCAGCAGCCGGGGGATaGATGCCACTGCCAGGCATGATGTGGGTCACTGTT +
Preference number: 6 (lower is better)
Translates to: GTEALPLAAAGG*MPLPGMMWVTV
Trigger: AACAGTGACCCACATCATGCCTGGCAGTGGCATGCATCCCCCGGCTGCTGCCAGGGGCAGAGCCTCTGTGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
CDS CCA 72 bp CCATGCAGGGAGGACCTGGCCAGCGCAGCGATCTCCTaGATAGTTAGGGCTCGCCGGGACTTGGGCAGCATC +
Preference number: 6 (lower is better)
Translates to: PCREDLASAAIS*IVRARRDLGSI
Trigger: GATGCTGCCCAAGTCCCGGCGAGCCCTAACTATCCAGGAGATCGCTGCGCTGGCCAGGTCCTCCCTGCATGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418768.5
ENST00000433578.5
ENST00000450976.5
ENST00000453072.5
ENST00000639617.1
CDS TCA 72 bp GGAAAGGCAGGACTCTGTGAGGGGCGAGTTGTAGAGTaGGTCCTGGGCCTCCAGTGGGCCCAGGCTGCGGAA +
Preference number: 6 (lower is better)
Translates to: GKAGLCEGRVVE*VLGLQWAQAAE
Trigger: TTCCGCAGCCTGGGCCCACTGGAGGCCCAGGACTCACTCTACAACTCGCCCCTCACAGAGTCCTGCCTTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418768.5
ENST00000450976.5
ENST00000453072.5
ENST00000639617.1
CDS TCA 72 bp GCCCAAGCGGGGTCCGAGGACACTCTGCGACTTGTCTaGCAAGTCCATCGTCCTCCAGGCCCTTCACGCTGC +
Preference number: 6 (lower is better)
Translates to: AQAGSEDTLRLV*QVHRPPGPSRC
Trigger: GCAGCGTGAAGGGCCTGGAGGACGATGGACTTGTCAGACAAGTCGCAGAGTGTCCTCGGACCCCGCTTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383847.7
ENST00000497070.1
ENST00000639617.1
CDS GCA 72 bp AGTCCTGACTGTCCACCGAGGAAGGGCGGGAGGACCTaGTCCAGCCTCGGAGGGTTCGAGCAGATCCCAAAG +
Preference number: 6 (lower is better)
Translates to: SPDCPPRKGGRT*SSLGGFEQIPK
Trigger: CTTTGGGATCTGCTCGAACCCTCCGAGGCTGGAGCAGGTCCTCCCGCCCTTCCTCGGTGGACAGTCAGGACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383847.7
ENST00000450976.5
ENST00000497070.1
ENST00000639617.1
CDS CAA 90 bp CTGGCCAGCGCAGCGATCTCCTGGATAGTTAGGGCTCGCCGGGACTaGGGCAGCATCGCGACTGTGTCTCCAACATTCACCCTGACCCGC +
Preference number: 6 (lower is better)
Translates to: LASAAISWIVRARRD*GSIATVSPTFTLTR
Trigger: GCGGGTCAGGGTGAATGTTGGAGACACAGTCGCGATGCTGCCCAAGTCCCGGCGAGCCCTAACTATCCAGGAGATCGCTGCGCTGGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433578.5
CDS CCA 72 bp ACTCGGCCCTGGGCCATGGCGGTAGGCTTGGTCACGTaGTCCTTCACCACCTGGGAAATACCATGCAGGGAG +
Preference number: 6 (lower is better)
Translates to: TRPWAMAVGLVT*SFTTWEIPCRE
Trigger: CTCCCTGCATGGTATTTCCCAGGTGGTGAAGGACCACGTGACCAAGCCTACCGCCATGGCCCAGGGCCGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340957.9
ENST00000383847.7
ENST00000418768.5
ENST00000433578.5
ENST00000450976.5
ENST00000453072.5
ENST00000639617.1
CDS CAA 90 bp CTGGCCAGCGCAGCGATCTCCTGGATAGTTAGGGCTCGCCGGGACTaGGGCAGCATCGCGACTGTGTCTCCAACATTCACCTCTGGCAAG +
Preference number: 6 (lower is better)
Translates to: LASAAISWIVRARRD*GSIATVSPTFTSGK
Trigger: CTTGCCAGAGGTGAATGTTGGAGACACAGTCGCGATGCTGCCCAAGTCCCGGCGAGCCCTAACTATCCAGGAGATCGCTGCGCTGGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383847.7
ENST00000450976.5
ENST00000639617.1
CDS CAA 90 bp CTGGCCAGCGCAGCGATCTCCTGGATAGTTAGGGCTCGCCGGGACTaGGGCAGCATCGCGACTGTGTCTCCAACATTCACCTGGCTGACA +
Preference number: 6 (lower is better)
Translates to: LASAAISWIVRARRD*GSIATVSPTFTWLT
Trigger: TGTCAGCCAGGTGAATGTTGGAGACACAGTCGCGATGCTGCCCAAGTCCCGGCGAGCCCTAACTATCCAGGAGATCGCTGCGCTGGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453072.5
CDS CCA 72 bp ACTCGGCCCTGGGCCATGGCGGTAGGCTTGGTCACGTaGTCCTTCACCACCTGGGAAATACCTGGAGATAGG +
Preference number: 6 (lower is better)
Translates to: TRPWAMAVGLVT*SFTTWEIPGDR
Trigger: CCTATCTCCAGGTATTTCCCAGGTGGTGAAGGACCACGTGACCAAGCCTACCGCCATGGCCCAGGGCCGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310585.4
CDS CAA 90 bp CTGGCCAGCGCAGCGATCTCCTGGATAGTTAGGGCTCGCCGGGACTaGGGCAGCATCGCGACTGTGTCTCCAACATTCACCTTGGGTAAC +
Preference number: 6 (lower is better)
Translates to: LASAAISWIVRARRD*GSIATVSPTFTLGN
Trigger: GTTACCCAAGGTGAATGTTGGAGACACAGTCGCGATGCTGCCCAAGTCCCGGCGAGCCCTAACTATCCAGGAGATCGCTGCGCTGGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310585.4
CDS CAA 90 bp CTGGCCAGCGCAGCGATCTCCTGGATAGTTAGGGCTCGCCGGGACTaGGGCAGCATCGCGACTGTGTCTCCAACATTCACCTTTAGCTGG +
Preference number: 6 (lower is better)
Translates to: LASAAISWIVRARRD*GSIATVSPTFTFSW
Trigger: CCAGCTAAAGGTGAATGTTGGAGACACAGTCGCGATGCTGCCCAAGTCCCGGCGAGCCCTAACTATCCAGGAGATCGCTGCGCTGGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340957.9
ENST00000418768.5
CDS GCA 72 bp GACCATGCTCGGAGCTTGGCTTCCGCGATGGCAAACTaGTCAGCCACTCCTGCTGCAAAGCGAGCCTCTTGT +
Preference number: 6 (lower is better)
Translates to: DHARSLASAMAN*SATPAAKRASC
Trigger: ACAAGAGGCTCGCTTTGCAGCAGGAGTGGCTGAGCAGTTTGCCATCGCGGAAGCCAAGCTCCGAGCATGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000418768.5
ENST00000433578.5
ENST00000450976.5
ENST00000453072.5
ENST00000487702.1
ENST00000639617.1
CDS GCA 72 bp CCTTCTCCACCAATCCCTGTCAGCAAGCAGCCCGCCTaGCTCCAGGAAAAGGAACTCAGCTTTCCTCTGGGC +
Preference number: 6 (lower is better)
Translates to: PSPPIPVSKQPA*LQEKELSFPLG
Trigger: GCCCAGAGGAAAGCTGAGTTCCTTTTCCTGGAGGCAGGCGGGCTGCTTGCTGACAGGGATTGGTGGAGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497070.1
CDS CCA 72 bp CAAGCCCTCAATGCCTCCTGCCCAGGTCGGCAGAAGTaGTGTTCCCCCAGCCTCCTCCAATCCCATGCTATT +
Preference number: 6 (lower is better)
Translates to: QALNASCPGRQK*CSPSLLQSHAI
Trigger: AATAGCATGGGATTGGAGGAGGCTGGGGGAACACCACTTCTGCCGACCTGGGCAGGAGGCATTGAGGGCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310585.4
ENST00000497070.1
CDS CCA 72 bp ACTCGGCCCTGGGCCATGGCGGTAGGCTTGGTCACGTaGTCCTTCACCACCTGGGAAATACCTTTAGCTGGA +
Preference number: 6 (lower is better)
Translates to: TRPWAMAVGLVT*SFTTWEIPLAG
Trigger: TCCAGCTAAAGGTATTTCCCAGGTGGTGAAGGACCACGTGACCAAGCCTACCGCCATGGCCCAGGGCCGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418281.5
CDS CCA 72 bp AAAACAGGAGGTTACAGGCCATCCCTGGCCCCCAACTaGTACCTAACCAGGGCTCTCGAGGCCAGTCCTGAG +
Preference number: 6 (lower is better)
Translates to: KTGGYRPSLAPN*YLTRALEASPE
Trigger: CTCAGGACTGGCCTCGAGAGCCCTGGTTAGGTACCAGTTGGGGGCCAGGGATGGCCTGTAACCTCCTGTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS CAA 72 bp GCAGCGATCTCCTGGATAGTTAGGGCTCGCCGGGACTaGGGCAGCATCGCGACTGTGTCTCCAACATTCACC +
Preference number: 6 (lower is better)
Translates to: AAISWIVRARRD*GSIATVSPTFT
Trigger: GGTGAATGTTGGAGACACAGTCGCGATGCTGCCCAAGTCCCGGCGAGCCCTAACTATCCAGGAGATCGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418768.5
ENST00000433578.5
ENST00000450976.5
ENST00000453072.5
ENST00000639617.1
CDS CAA 90 bp AAGCCCAGAACCGCTCCAGGCTCAGCTCCCAGTTCTATTCCTGTTTaGGCTCCGGATGCTGAGCCAGTCCCCTCCCCATTTGGAACCTGT +
Preference number: 6 (lower is better)
Translates to: KPRTAPGSAPSSIPV*APDAEPVPSPFGTC
Trigger: ACAGGTTCCAAATGGGGAGGGGACTGGCTCAGCATCCGGAGCCAAAACAGGAATAGAACTGGGAGCTGAGCCTGGAGCGGTTCTGGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS GCA 72 bp TACTGCTACTGCCATTGCCCTTTCTCAAGCCCTCAATaGCTCCTGCCCAGGTCGGCAGAAGTGGTGTTCCCC +
Preference number: 6 (lower is better)
Translates to: YCYCHCPFSSPQ*LLPRSAEVVFP
Trigger: GGGGAACACCACTTCTGCCGACCTGGGCAGGAGGCATTGAGGGCTTGAGAAAGGGCAATGGCAGTAGCAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310585.4
ENST00000497070.1
CDS CCA 72 bp GGTCTTCCCATCCACATTCCGGCAGACTCGGCAAGATaGAAACCAAACCCCCACACCTTCTCCCCACGTCTG +
Preference number: 6 (lower is better)
Translates to: GLPIHIPADSAR*KPNPHTFSPRL
Trigger: CAGACGTGGGGAGAAGGTGTGGGGGTTTGGTTTCCATCTTGCCGAGTCTGCCGGAATGTGGATGGGAAGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310585.4
ENST00000497070.1
CDS CAA 72 bp ACCGCTCCAGGCTCAGCTCCCAGTTCTATTCCTGTTTaGGCTCCGGATGCTGAGCCAGTCCCCTCCCCATTT +
Preference number: 6 (lower is better)
Translates to: TAPGSAPSSIPV*APDAEPVPSPF
Trigger: AAATGGGGAGGGGACTGGCTCAGCATCCGGAGCCAAAACAGGAATAGAACTGGGAGCTGAGCCTGGAGCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639617.1
CDS TCA 72 bp CTCCTGCTGCAAAGCGAGCCTCTTGTTCGCCCTCGCTaGGGTCTGAATAGGAGGAAAAGGCTGATTCCAGGG +
Preference number: 6 (lower is better)
Translates to: LLLQSEPLVRPR*GLNRRKRLIPG
Trigger: CCCTGGAATCAGCCTTTTCCTCCTATTCAGACCTCAGCGAGGGCGAACAAGAGGCTCGCTTTGCAGCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000418768.5
ENST00000433578.5
ENST00000450976.5
ENST00000453072.5
ENST00000487702.1
ENST00000639617.1
CDS CCA 72 bp GGATGTGGCTCTGAAAGAATGCCAAGGTCTATCAGGTaGGTCCACCACAGCCCTAGCCCAGGATGTCCCTCA +
Preference number: 6 (lower is better)
Translates to: GCGSERMPRSIR*VHHSPSPGCPS
Trigger: TGAGGGACATCCTGGGCTAGGGCTGTGGTGGACCCACCTGATAGACCTTGGCATTCTTTCAGAGCCACATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487702.1
CDS CAA 90 bp TTTCCCTCACTTAATGAAGTTGGAGGCACACATCCCTCCCCGGCATaGCCCAGCTCTCTTCTATCACGTTCCCGTCCCTCACAAGGGCAG +
Preference number: 6 (lower is better)
Translates to: FPSLNEVGGTHPSPA*PSSLLSRSRPSQGQ
Trigger: CTGCCCTTGTGAGGGACGGGAACGTGATAGAAGAGAGCTGGGCAATGCCGGGGAGGGATGTGTGCCTCCAACTTCATTAAGTGAGGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497070.1
CDS CCA 72 bp TTCCCCCAGCAAAGTCCTCATCATAGGAGTCATCAGTaGAGTCCTCGCCATCCACCGAAGACCATGCTCGGA +
Preference number: 6 (lower is better)
Translates to: FPQQSPHHRSHQ*SPRHPPKTMLG
Trigger: TCCGAGCATGGTCTTCGGTGGATGGCGAGGACTCCACTGATGACTCCTATGATGAGGACTTTGCTGGGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000310585.4
ENST00000340957.9
ENST00000383847.7
ENST00000418281.5
ENST00000418768.5
ENST00000433578.5
ENST00000450976.5
ENST00000453072.5
ENST00000487702.1
ENST00000639617.1
CDS CAA 72 bp CTTAATGAAGTTGGAGGCACACATCCCTCCCCGGCATaGCCCAGCTCTCTTCTATCACGTTCCCGTCCCTCA +
Preference number: 6 (lower is better)
Translates to: LNEVGGTHPSPA*PSSLLSRSRPS
Trigger: TGAGGGACGGGAACGTGATAGAAGAGAGCTGGGCAATGCCGGGGAGGGATGTGTGCCTCCAACTTCATTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497070.1
CDS TCA 72 bp GGCTGGCTAGCTCTTTCTCATTCTTCCAGTTTGGGCTaGAATACCACCTCGTCAGAGGAGCTTTCCTGGCCC +
Preference number: 6 (lower is better)
Translates to: GWLALSHSSSLG*NTTSSEELSWP
Trigger: GGGCCAGGAAAGCTCCTCTGACGAGGTGGTATTTCAGCCCAAACTGGAAGAATGAGAAAGAGCTAGCCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310585.4
ENST00000497070.1
CDS CAA 90 bp CAAGTCCATCGTCCTCCAGGCCCTTCACGCTGCCACAGAAACATTTaGCCCAGCACAGAAATCATAGGCATGCTGGCTGTGTTGATGCAG +
Preference number: 6 (lower is better)
Translates to: QVHRPPGPSRCHRNI*PSTEIIGMLAVLMQ
Trigger: CTGCATCAACACAGCCAGCATGCCTATGATTTCTGTGCTGGGCAAAATGTTTCTGTGGCAGCGTGAAGGGCCTGGAGGACGATGGACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383847.7
ENST00000497070.1
ENST00000639617.1
CDS TCA 72 bp CCCTTGCAAAGGCTGAGAGTGTTCTGGATGTGGCTCTaGAAGAATGCCAAGGTCTATCAGGTGGGTCCACCA +
Preference number: 6 (lower is better)
Translates to: PLQRLRVFWMWL*KNAKVYQVGPP
Trigger: TGGTGGACCCACCTGATAGACCTTGGCATTCTTTCAGAGCCACATCCAGAACACTCTCAGCCTTTGCAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487702.1
CDS GCA 72 bp AAGGCTGAGAGTGTTCTGGATGTGGCTCTGAAAGAATaGCAAGGTCTATCAGGTGGGTCCACCACAGCCCTA +
Preference number: 6 (lower is better)
Translates to: KAESVLDVALKE*QGLSGGSTTAL
Trigger: TAGGGCTGTGGTGGACCCACCTGATAGACCTTGGCATTCTTTCAGAGCCACATCCAGAACACTCTCAGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487702.1
CDS GCA 72 bp CAGCACCTGTGGGAAAGGAACGAATCCATTTCTGTCTaGTCATTTCCCACCCATGAGTGTGGACAGCCTTCC +
Preference number: 6 (lower is better)
Translates to: QHLWERNESISV*SFPTHECGQPS
Trigger: GGAAGGCTGTCCACACTCATGGGTGGGAAATGAGCAGACAGAAATGGATTCGTTCCTTTCCCACAGGTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487702.1
CDS CAA 90 bp CAGCATTACCATCAATTCTCCCCTGGCTTTGCTTGCCCATATCTGTaGATAAGACCTAATGATTCCACCTGCAAAGTCCCTGCTCCTACC +
Preference number: 6 (lower is better)
Translates to: QHYHQFSPGFACPYL*IRPNDSTCKVPAPT
Trigger: GGTAGGAGCAGGGACTTTGCAGGTGGAATCATTAGGTCTTATCAACAGATATGGGCAAGCAAAGCCAGGGGAGAATTGATGGTAATGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310585.4
ENST00000497070.1
CDS CAA 90 bp ACAGTTTTCCTGGAGTGCAGCTGGTCACAACACATCTCTAAAATCTaGTCTAGCCTACGCTACTGTCCAGTGAGGTTAGTGCAGGCATCA +
Preference number: 6 (lower is better)
Translates to: TVFLECSWSQHISKI*SSLRYCPVRLVQAS
Trigger: TGATGCCTGCACTAACCTCACTGGACAGTAGCGTAGGCTAGACAAGATTTTAGAGATGTGTTGTGACCAGCTGCACTCCAGGAAAACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497070.1
CDS TCA 72 bp TCAGCTTTCCTCTGGGCCAAGAATGCCATCCTTACGTaGAAAAATGCTTGCCATCACTTAAGGCCCATCTCA +
Preference number: 6 (lower is better)
Translates to: SAFLWAKNAILT*KNACHHLRPIS
Trigger: TGAGATGGGCCTTAAGTGATGGCAAGCATTTTTTCACGTAAGGATGGCATTCTTGGCCCAGAGGAAAGCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497070.1
CDS GCA 72 bp CCTCAGCATTACCATCAATTCTCCCCTGGCTTTGCTTaGCCATATCTGTTGATAAGACCTAATGATTCCACC +
Preference number: 6 (lower is better)
Translates to: PQHYHQFSPGFA*PYLLIRPNDST
Trigger: GGTGGAATCATTAGGTCTTATCAACAGATATGGGCAAGCAAAGCCAGGGGAGAATTGATGGTAATGCTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310585.4
ENST00000497070.1
CDS CAA 72 bp CATCAATTCTCCCCTGGCTTTGCTTGCCCATATCTGTaGATAAGACCTAATGATTCCACCTGCAAAGTCCCT +
Preference number: 6 (lower is better)
Translates to: HQFSPGFACPYL*IRPNDSTCKVP
Trigger: AGGGACTTTGCAGGTGGAATCATTAGGTCTTATCAACAGATATGGGCAAGCAAAGCCAGGGGAGAATTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310585.4
ENST00000497070.1
CDS CAA 90 bp TTAGTCATAGTGAGTAATAATGGTCTCTTTTGCATTTCCTGTTTCTaGTTGGTCTCCCTCACTGGTCTTTGGCTCTTGGGGAATTCAGTC +
Preference number: 6 (lower is better)
Translates to: LVIVSNNGLFCISCF*LVSLTGLWLLGNSV
Trigger: GACTGAATTCCCCAAGAGCCAAAGACCAGTGAGGGAGACCAACAAGAAACAGGAAATGCAAAAGAGACCATTATTACTCACTATGACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310585.4
ENST00000497070.1