RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM126B (Homo sapiens)

Ensembl gene IDs: ENSG00000155744

Ensembl transcript IDs: ENST00000286181.7, ENST00000418596.7, ENST00000452799.5, ENST00000453765.5, ENST00000474118.5, ENST00000490725.5, ENST00000498780.5, ENST00000681958.1

Found 332 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCACCCTCTGTTGTGGCTGTTGCTGAGTTGGGCTCCGGCGAGCCATaGTCAGGGGTCCTGCGCACCAGCACCTCCCCCTCTTGCACACGT +
Preference number: 1 (lower is better)
Translates to: APSVVAVAELGSGEP*SGVLRTSTSPSCTR
Trigger: ACGTGTGCAAGAGGGGGAGGTGCTGGTGCGCAGGACCCCTGAGCATGGCTCGCCGGAGCCCAACTCAGCAACAGCCACAACAGAGGGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR GCA 90 bp GGCGAGCCATGCTCAGGGGTCCTGCGCACCAGCACCTCCCCCTCTTaGACACGTTTGATCCCTAGGTCAGTGGAGCCGTGTTGGATCGGG +
Preference number: 1 (lower is better)
Translates to: GEPCSGVLRTSTSPS*TRLIPRSVEPCWIG
Trigger: CCCGATCCAACACGGCTCCACTGACCTAGGGATCAAACGTGTGCAAGAGGGGGAGGTGCTGGTGCGCAGGACCCCTGAGCATGGCTCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR CCA 90 bp CTCCATTTACACCCTCAGCACCCTCTGTTGTGGCTGTTGCTGAGTTaGGCTCCGGCGAGCCATGCTCAGGGGTCCTGCGCACCAGCACCT +
Preference number: 1 (lower is better)
Translates to: LHLHPQHPLLWLLLS*APASHAQGSCAPAP
Trigger: AGGTGCTGGTGCGCAGGACCCCTGAGCATGGCTCGCCGGAGCCCAACTCAGCAACAGCCACAACAGAGGGTGCTGAGGGTGTAAATGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR CCA 90 bp TCCCCCTCTTGCACACGTTTGATCCCTAGGTCAGTGGAGCCGTGTTaGATCGGGGAGCCAGGAATACTCGAGTCAGCCTCGTTTGAGAAG +
Preference number: 1 (lower is better)
Translates to: SPSCTRLIPRSVEPC*IGEPGILESASFEK
Trigger: CTTCTCAAACGAGGCTGACTCGAGTATTCCTGGCTCCCCGATCCAACACGGCTCCACTGACCTAGGGATCAAACGTGTGCAAGAGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR TCA 90 bp GTCAAGGGGGCTCCTGGGCTGAGGAGCTCTTTACCTTCGCCAGCTTaGCCTAGCCGGTCTTCCTGCAGACTGACAGTTGAGTATCGATTA +
Preference number: 1 (lower is better)
Translates to: VKGAPGLRSSLPSPA*PSRSSCRLTVEYRL
Trigger: TAATCGATACTCAACTGTCAGTCTGCAGGAAGACCGGCTAGGTCAAGCTGGCGAAGGTAAAGAGCTCCTCAGCCCAGGAGCCCCCTTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR GCA 90 bp TACACCTGGGATATTAGCTGCATATTGAAACTTGGGGATCGAGACTaGTTGGTCAAGGGGGCTCCTGGGCTGAGGAGCTCTTTACCTTCG +
Preference number: 1 (lower is better)
Translates to: YTWDISCILKLGDRD*LVKGAPGLRSSLPS
Trigger: CGAAGGTAAAGAGCTCCTCAGCCCAGGAGCCCCCTTGACCAAGCAGTCTCGATCCCCAAGTTTCAATATGCAGCTAATATCCCAGGTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR TCA 90 bp CATACTGCTTGCGAACTACTGAATCTCGAGGGCTCTCACTGGATTTaGTGGCAGAGGCTGTTTCTTTATCCTTGGCTGAACGCCCAGTTG +
Preference number: 1 (lower is better)
Translates to: HTACELLNLEGSHWI*WQRLFLYPWLNAQL
Trigger: CAACTGGGCGTTCAGCCAAGGATAAAGAAACAGCCTCTGCCATCAAATCCAGTGAGAGCCCTCGAGATTCAGTAGTTCGCAAGCAGTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR CCA 90 bp TACCCTCAGTCTCACAGTGTTGAAATGGGACCGATCAGCCTACGATaGATTGCACATCACCCAAGGAGAAAGGAAGGCATGGAAAAGGCA +
Preference number: 1 (lower is better)
Translates to: YPQSHSVEMGPISLR*IAHHPRRKEGMEKA
Trigger: TGCCTTTTCCATGCCTTCCTTTCTCCTTGGGTGATGTGCAATCCATCGTAGGCTGATCGGTCCCATTTCAACACTGTGAGACTGAGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
3UTR TCA 90 bp ATTTACTTGAGGAAGCACTGGCTGTCCGGATTAGACTTAAGCTATTaGTTTTTGGCACCACCTGGCCAGCAGGCAGGCTCAGGTGTTTCT +
Preference number: 1 (lower is better)
Translates to: IYLRKHWLSGLDLSY*FLAPPGQQAGSGVS
Trigger: AGAAACACCTGAGCCTGCCTGCTGGCCAGGTGGTGCCAAAAATCAATAGCTTAAGTCTAATCCGGACAGCCAGTGCTTCCTCAAGTAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR TCA 90 bp GAGTTAACAACCCACTGCCTCCCCAAACCCATGGGAGACTGGGTTTaGTTCTGGCTCTGCTTTAGGTATATGATCTTGATCACACCACAA +
Preference number: 1 (lower is better)
Translates to: ELTTHCLPKPMGDWV*FWLCFRYMILITPQ
Trigger: TTGTGGTGTGATCAAGATCATATACCTAAAGCAGAGCCAGAATCAAACCCAGTCTCCCATGGGTTTGGGGAGGCAGTGGGTTGTTAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418596.7
3UTR TCA 90 bp TACACTAAGATCAGTTGGTTGCTGTACATACTGCTTGCGAACTACTaGATCTCGAGGGCTCTCACTGGATTTGATGGCAGAGGCTGTTTC +
Preference number: 1 (lower is better)
Translates to: YTKISWLLYILLANY*ISRALTGFDGRGCF
Trigger: GAAACAGCCTCTGCCATCAAATCCAGTGAGAGCCCTCGAGATTCAGTAGTTCGCAAGCAGTATGTACAGCAACCAACTGATCTTAGTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR GCA 90 bp AGCTCAACTGAATCTACACTAAGATCAGTTGGTTGCTGTACATACTaGTTGCGAACTACTGAATCTCGAGGGCTCTCACTGGATTTGATG +
Preference number: 1 (lower is better)
Translates to: SSTESTLRSVGCCTY*LRTTESRGLSLDLM
Trigger: CATCAAATCCAGTGAGAGCCCTCGAGATTCAGTAGTTCGCAAGCAGTATGTACAGCAACCAACTGATCTTAGTGTAGATTCAGTTGAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR GCA 90 bp TTCATTGGTGTCAGCTCAACTGAATCTACACTAAGATCAGTTGGTTaGTGTACATACTGCTTGCGAACTACTGAATCTCGAGGGCTCTCA +
Preference number: 1 (lower is better)
Translates to: FIGVSSTESTLRSVG*CTYCLRTTESRGLS
Trigger: TGAGAGCCCTCGAGATTCAGTAGTTCGCAAGCAGTATGTACAGCAACCAACTGATCTTAGTGTAGATTCAGTTGAGCTGACACCAATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR TCA 90 bp ACTCACACAAACCCTGGAACCCATCCGACAAAGAGATTGGTAAGATaGGGCAGGCATATATACAATAGCAGAATTATAACACAGCATGAG +
Preference number: 1 (lower is better)
Translates to: THTNPGTHPTKRLVR*GRHIYNSRIITQHE
Trigger: CTCATGCTGTGTTATAATTCTGCTATTGTATATATGCCTGCCTCATCTTACCAATCTCTTTGTCGGATGGGTTCCAGGGTTTGTGTGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR CCA 90 bp GAAATCCTCGGCACTGTTGGAGTGACTTCAACTTTAAGGACTTTCTaGCCTTCTTGTGTAGAATCAGGAGCATCAAATGGTAATGAGTTT +
Preference number: 1 (lower is better)
Translates to: EILGTVGVTSTLRTF*PSCVESGASNGNEF
Trigger: AAACTCATTACCATTTGATGCTCCTGATTCTACACAAGAAGGCCAGAAAGTCCTTAAAGTTGAAGTCACTCCAACAGTGCCGAGGATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR TCA 90 bp GCAACCATTTTATACTGCTTCACAAACACATTTACAAGGGATAGGTaGAGAGAAGATGTAGGAAAGAGGGATAAAGAAAACCTTATTGCT +
Preference number: 1 (lower is better)
Translates to: ATILYCFTNTFTRDR*REDVGKRDKENLIA
Trigger: AGCAATAAGGTTTTCTTTATCCCTCTTTCCTACATCTTCTCTTCACCTATCCCTTGTAAATGTGTTTGTGAAGCAGTATAAAATGGTTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
3UTR TCA 90 bp CTGATGAGTAGGATCCTTAATTTAAGGAGACCAGAAACTGTGCTATaGGGAATAATATTTAGATTTAGCTTTAACGGGTACTTTTGCTGG +
Preference number: 1 (lower is better)
Translates to: LMSRILNLRRPETVL*GIIFRFSFNGYFCW
Trigger: CCAGCAAAAGTACCCGTTAAAGCTAAATCTAAATATTATTCCTCATAGCACAGTTTCTGGTCTCCTTAAATTAAGGATCCTACTCATCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418596.7
3UTR CAA 90 bp CCTCCATTTACACCCTCAGCACCCTCTGTTGTGGCTGTTGCTGAGTaGGGCTCCGGCGAGCCATGCTCAGGGGTCCTGCGCACCAGCACC +
Preference number: 2 (lower is better)
Translates to: PPFTPSAPSVVAVAE*GSGEPCSGVLRTST
Trigger: GGTGCTGGTGCGCAGGACCCCTGAGCATGGCTCGCCGGAGCCCAACTCAGCAACAGCCACAACAGAGGGTGCTGAGGGTGTAAATGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR-3UTR CCA 90 bp ATCCCTAGGTCAGTGGAGCCGTGTTGGATCGGGGAGCCAGGAATACTCGAGTCACACTCACACAAACCCTaGAACCCATCCGACAAAGAG +
Preference number: 2 (lower is better)
Translates to: IPRSVEPCWIGEPGILESHSHKP*NPSDKE
Trigger: CTCTTTGTCGGATGGGTTCCAGGGTTTGTGTGAGTG...TGACTCGAGTATTCCTGGCTCCCCGATCCAACACGGCTCCACTGACCTAGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR-3UTR CCA 90 bp CACCCTCAGCACCCTCTGTTGTGGCTGTTGCTGAGTTGGGCTCCGGCGAGCCATTTTTTCATGTTGCCGTaGAAAGCCACTCACACAAAC +
Preference number: 2 (lower is better)
Translates to: HPQHPLLWLLLSWAPASHFFMLP*KATHTN
Trigger: GTTTGTGTGAGTGGCTTTCCACGGCAACATGAAAAA...ATGGCTCGCCGGAGCCCAACTCAGCAACAGCCACAACAGAGGGTGCTGAGGGTG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR-3UTR CCA 90 bp CACCCTCAGCACCCTCTGTTGTGGCTGTTGCTGAGTTGGGCTCCGGCGAGCCATAATCCTCGGCACTGTTaGAGTGACTTCAACTTTAAG +
Preference number: 2 (lower is better)
Translates to: HPQHPLLWLLLSWAPASHNPRHC*SDFNFK
Trigger: CTTAAAGTTGAAGTCACTCCAACAGTGCCGAGGATT...ATGGCTCGCCGGAGCCCAACTCAGCAACAGCCACAACAGAGGGTGCTGAGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR CAA 90 bp ACCTGGGATATTAGCTGCATATTGAAACTTGGGGATCGAGACTGCTaGGTCAAGGGGGCTCCTGGGCTGAGGAGCTCTTTACCTTCGCCA +
Preference number: 2 (lower is better)
Translates to: TWDISCILKLGDRDC*VKGAPGLRSSLPSP
Trigger: TGGCGAAGGTAAAGAGCTCCTCAGCCCAGGAGCCCCCTTGACCAAGCAGTCTCGATCCCCAAGTTTCAATATGCAGCTAATATCCCAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR-3UTR TCA 90 bp ATCCCTAGGTCAGTGGAGCCGTGTTGGATCGGGGAGCCAGGAATACTCGAGTCATCTCTTCTCCATCTATaGCGACGGATTGAAGCTGTT +
Preference number: 2 (lower is better)
Translates to: IPRSVEPCWIGEPGILESSLLHL*RRIEAV
Trigger: AACAGCTTCAATCCGTCGTCATAGATGGAGAAGAGA...TGACTCGAGTATTCCTGGCTCCCCGATCCAACACGGCTCCACTGACCTAGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR-3UTR CCA 90 bp TTGATCACACCACAACCTCTGAGCCTCTGTTTCTTGAGGATGAAGGTTGGGGTGCCGATCAGCCTACGATaGATTGCACATCACCCAAGG +
Preference number: 2 (lower is better)
Translates to: LITPQPLSLCFLRMKVGVPISLR*IAHHPR
Trigger: CCTTGGGTGATGTGCAATCCATCGTAGGCTGATCGG...CACCCCAACCTTCATCCTCAAGAAACAGAGGCTCAGAGGTTGTGGTGTGATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418596.7
3UTR CAA 90 bp GATTTACTTGAGGAAGCACTGGCTGTCCGGATTAGACTTAAGCTATaGATTTTTGGCACCACCTGGCCAGCAGGCAGGCTCAGGTGTTTC +
Preference number: 2 (lower is better)
Translates to: DLLEEALAVRIRLKL*IFGTTWPAGRLRCF
Trigger: GAAACACCTGAGCCTGCCTGCTGGCCAGGTGGTGCCAAAAATCAATAGCTTAAGTCTAATCCGGACAGCCAGTGCTTCCTCAAGTAAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR CAA 90 bp AGCCGGTCTTCCTGCAGACTGACAGTTGAGTATCGATTAGCATTGTaGGCTGCTAAATTAGTACCTCCCTCAGTGCCAACCCCAATGCTG +
Preference number: 2 (lower is better)
Translates to: SRSSCRLTVEYRLAL*AAKLVPPSVPTPML
Trigger: CAGCATTGGGGTTGGCACTGAGGGAGGTACTAATTTAGCAGCCAACAATGCTAATCGATACTCAACTGTCAGTCTGCAGGAAGACCGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR CAA 90 bp CCTAGCCGGTCTTCCTGCAGACTGACAGTTGAGTATCGATTAGCATaGTTGGCTGCTAAATTAGTACCTCCCTCAGTGCCAACCCCAATG +
Preference number: 2 (lower is better)
Translates to: PSRSSCRLTVEYRLA*LAAKLVPPSVPTPM
Trigger: CATTGGGGTTGGCACTGAGGGAGGTACTAATTTAGCAGCCAACAATGCTAATCGATACTCAACTGTCAGTCTGCAGGAAGACCGGCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR-3UTR TCA 90 bp CGTTTGATCCCTAGGTCAGTGGAGCCGTGTTGGATCGGGGAGCCAGGAATACTCGCTGGGCTCTATAAATaGTATCATCAAGAACTTCCT +
Preference number: 2 (lower is better)
Translates to: RLIPRSVEPCWIGEPGILAGLYK*YHQELP
Trigger: AGGAAGTTCTTGATGATATCATTTATAGAGCCCAGC...GAGTATTCCTGGCTCCCCGATCCAACACGGCTCCACTGACCTAGGGATCAAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR CAA 90 bp ACATACTGCTTGCGAACTACTGAATCTCGAGGGCTCTCACTGGATTaGATGGCAGAGGCTGTTTCTTTATCCTTGGCTGAACGCCCAGTT +
Preference number: 2 (lower is better)
Translates to: TYCLRTTESRGLSLD*MAEAVSLSLAERPV
Trigger: AACTGGGCGTTCAGCCAAGGATAAAGAAACAGCCTCTGCCATCAAATCCAGTGAGAGCCCTCGAGATTCAGTAGTTCGCAAGCAGTATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR-3UTR TCA 90 bp ATCCCTAGGTCAGTGGAGCCGTGTTGGATCGGGGAGCCAGGAATACTCGAGTCAAAGAGATTGGTAAGATaGGGCAGGCATATATACAAT +
Preference number: 2 (lower is better)
Translates to: IPRSVEPCWIGEPGILESKRLVR*GRHIYN
Trigger: ATTGTATATATGCCTGCCTCATCTTACCAATCTCTT...TGACTCGAGTATTCCTGGCTCCCCGATCCAACACGGCTCCACTGACCTAGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR-3UTR CCA 90 bp CGTTTGATCCCTAGGTCAGTGGAGCCGTGTTGGATCGGGGAGCCAGGAATACTCACTTTAAGGACTTTCTaGCCTTCTTGTGTAGAATCA +
Preference number: 2 (lower is better)
Translates to: RLIPRSVEPCWIGEPGILTLRTF*PSCVES
Trigger: TGATTCTACACAAGAAGGCCAGAAAGTCCTTAAAGT...GAGTATTCCTGGCTCCCCGATCCAACACGGCTCCACTGACCTAGGGATCAAACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR-3UTR TCA 90 bp TTGATCACACCACAACCTCTGAGCCTCTGTTTCTTGAGGATGAAGGTTGGGGTGATGCCCCTCAGATTCTaGTTTGTTAGTTGGCCAAAC +
Preference number: 2 (lower is better)
Translates to: LITPQPLSLCFLRMKVGVMPLRF*FVSWPN
Trigger: GTTTGGCCAACTAACAAATCAGAATCTGAGGGGCAT...CACCCCAACCTTCATCCTCAAGAAACAGAGGCTCAGAGGTTGTGGTGTGATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418596.7
3UTR-3UTR TCA 90 bp TTGATCACACCACAACCTCTGAGCCTCTGTTTCTTGAGGATGAAGGTTGGGGTGATCCCTCTCTTTACCTaGAGATGTACTGTTACACTT +
Preference number: 2 (lower is better)
Translates to: LITPQPLSLCFLRMKVGVIPLFT*RCTVTL
Trigger: AAGTGTAACAGTACATCTTCAGGTAAAGAGAGGGAT...CACCCCAACCTTCATCCTCAAGAAACAGAGGCTCAGAGGTTGTGGTGTGATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418596.7
3UTR CAA 90 bp TCAACTGAATCTACACTAAGATCAGTTGGTTGCTGTACATACTGCTaGCGAACTACTGAATCTCGAGGGCTCTCACTGGATTTGATGGCA +
Preference number: 2 (lower is better)
Translates to: STESTLRSVGCCTYC*RTTESRGLSLDLMA
Trigger: TGCCATCAAATCCAGTGAGAGCCCTCGAGATTCAGTAGTTCGCAAGCAGTATGTACAGCAACCAACTGATCTTAGTGTAGATTCAGTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR-3UTR TCA 90 bp CAAAGCACTGATAGCTCTGATGTATTCTGTGGAAGGATAACTTATAACAGTTTATTACCTTCGCCAGCTTaGCCTAGCCGGTCTTCCTGC +
Preference number: 2 (lower is better)
Translates to: QSTDSSDVFCGRITYNSLLPSPA*PSRSSC
Trigger: GCAGGAAGACCGGCTAGGTCAAGCTGGCGAAGGTAA...TAAACTGTTATAAGTTATCCTTCCACAGAATACATCAGAGCTATCAGTGCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR-3UTR TCA 90 bp CAATGCTGGTACTTGCTTGACTGCCATTTACATAGTCAAATGATTTACTTGAGGCTGATGAGATCATGCTaGCACAATGCCCCTTCTGTC +
Preference number: 2 (lower is better)
Translates to: QCWYLLDCHLHSQMIYLRLMRSC*HNAPSV
Trigger: GACAGAAGGGGCATTGTGTCAGCATGATCTCATCAG...CCTCAAGTAAATCATTTGACTATGTAAATGGCAGTCAAGCAAGTACCAGCATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR-3UTR TCA 90 bp CAATGCTGGTACTTGCTTGACTGCCATTTACATAGTCAAATGATTTACTTGAGGCGAGTCAGCCTCGTTTaGGAAGTCAAAGCCATCTTC +
Preference number: 2 (lower is better)
Translates to: QCWYLLDCHLHSQMIYLRRVSLV*EVKAIF
Trigger: GAAGATGGCTTTGACTTCTCAAACGAGGCTGACTCG...CCTCAAGTAAATCATTTGACTATGTAAATGGCAGTCAAGCAAGTACCAGCATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR-3UTR GCA 90 bp GCTTCTCCAGAAAATGATTGCACAGACTCAGAGAAGTCCAAAGTCATAGCAGAACAGTGTTTTTCATGTTaGCGTGGAAAGCCACTCACA +
Preference number: 2 (lower is better)
Translates to: ASPENDCTDSEKSKVIAEQCFSC*RGKPLT
Trigger: TGTGAGTGGCTTTCCACGGCAACATGAAAAACACTG...TTCTGCTATGACTTTGGACTTCTCTGAGTCTGTGCAATCATTTTCTGGAGAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR-3UTR GCA 90 bp CAAAGCACTGATAGCTCTGATGTATTCTGTGGAAGGATAACTTATAACAGTTTACAGTGCCAACCCCAATaGTGGTACTTGCTTGACTGC +
Preference number: 2 (lower is better)
Translates to: QSTDSSDVFCGRITYNSLQCQPQ*WYLLDC
Trigger: GCAGTCAAGCAAGTACCAGCATTGGGGTTGGCACTG...TAAACTGTTATAAGTTATCCTTCCACAGAATACATCAGAGCTATCAGTGCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR-3UTR CCA 90 bp CAAAGCACTGATAGCTCTGATGTATTCTGTGGAAGGATAACTTATAACAGTTTATGGTTTGGTCCCAATTaGCTGACTGCTGAGGGAAGC +
Preference number: 2 (lower is better)
Translates to: QSTDSSDVFCGRITYNSLWFGPN*LTAEGS
Trigger: GCTTCCCTCAGCAGTCAGCCAATTGGGACCAAACCA...TAAACTGTTATAAGTTATCCTTCCACAGAATACATCAGAGCTATCAGTGCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR-3UTR TCA 90 bp CAAAGCACTGATAGCTCTGATGTATTCTGTGGAAGGATAACTTATAACAGTTTAGGCTCTCACTGGATTTaGTGGCAGAGGCTGTTTCTT +
Preference number: 2 (lower is better)
Translates to: QSTDSSDVFCGRITYNSLGSHWI*WQRLFL
Trigger: AAGAAACAGCCTCTGCCATCAAATCCAGTGAGAGCC...TAAACTGTTATAAGTTATCCTTCCACAGAATACATCAGAGCTATCAGTGCTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR-3UTR TCA 90 bp ATTGTCTACTTATCAACTTTTAGCTTTACCCTGGACTTTGGCAATGTTGTAGATTCAGTCTCACAGTGTTaGAATGGGACCGATCAGCCT +
Preference number: 2 (lower is better)
Translates to: IVYLSTFSFTLDFGNVVDSVSQC*NGTDQP
Trigger: AGGCTGATCGGTCCCATTTCAACACTGTGAGACTGA...ATCTACAACATTGCCAAAGTCCAGGGTAAAGCTAAAAGTTGATAAGTAGACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
3UTR-3UTR GCA 90 bp CAATGCTGGTACTTGCTTGACTGCCATTTACATAGTCAAATGATTTACTTGAGGATCATGCTGACACAATaGCCCTTCTGTCAAAGCCAT +
Preference number: 2 (lower is better)
Translates to: QCWYLLDCHLHSQMIYLRIMLTQ*PFCQSH
Trigger: ATGGCTTTGACAGAAGGGGCATTGTGTCAGCATGAT...CCTCAAGTAAATCATTTGACTATGTAAATGGCAGTCAAGCAAGTACCAGCATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR-3UTR CCA 90 bp CAATGCTGGTACTTGCTTGACTGCCATTTACATAGTCAAATGATTTACTTGAGGCTGTTTCTTTATCCTTaGCTGAACGCCCAGTTGCTA +
Preference number: 2 (lower is better)
Translates to: QCWYLLDCHLHSQMIYLRLFLYP*LNAQLL
Trigger: TAGCAACTGGGCGTTCAGCCAAGGATAAAGAAACAG...CCTCAAGTAAATCATTTGACTATGTAAATGGCAGTCAAGCAAGTACCAGCATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR-3UTR CCA 90 bp ATTGTCTACTTATCAACTTTTAGCTTTACCCTGGACTTTGGCAATGTTGTAGATTGCCAACCCCAATGCTaGTACTTGCTTGACTGCCAT +
Preference number: 2 (lower is better)
Translates to: IVYLSTFSFTLDFGNVVDCQPQC*YLLDCH
Trigger: ATGGCAGTCAAGCAAGTACCAGCATTGGGGTTGGCA...ATCTACAACATTGCCAAAGTCCAGGGTAAAGCTAAAAGTTGATAAGTAGACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR-3UTR GCA 90 bp CAATGCTGGTACTTGCTTGACTGCCATTTACATAGTCAAATGATTTACTTGAGGACAGAAGTGCTTCAATaGAACCATTACTCTGTCTGT +
Preference number: 2 (lower is better)
Translates to: QCWYLLDCHLHSQMIYLRTEVLQ*NHYSVC
Trigger: ACAGACAGAGTAATGGTTGCATTGAAGCACTTCTGT...CCTCAAGTAAATCATTTGACTATGTAAATGGCAGTCAAGCAAGTACCAGCATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR-3UTR GCA 90 bp CAAAGCACTGATAGCTCTGATGTATTCTGTGGAAGGATAACTTATAACAGTTTATTCAAACCGGTTCTGTaGAGTGAATGTTTCCCTCTG +
Preference number: 2 (lower is better)
Translates to: QSTDSSDVFCGRITYNSLFKPVL*SECFPL
Trigger: CAGAGGGAAACATTCACTGCACAGAACCGGTTTGAA...TAAACTGTTATAAGTTATCCTTCCACAGAATACATCAGAGCTATCAGTGCTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR-3UTR CCA 90 bp CAATGCTGGTACTTGCTTGACTGCCATTTACATAGTCAAATGATTTACTTGAGGAGTTTTTCATGGCATTaGCAACCAATAGTGGTTGAG +
Preference number: 2 (lower is better)
Translates to: QCWYLLDCHLHSQMIYLRSFSWH*QPIVVE
Trigger: CTCAACCACTATTGGTTGCCAATGCCATGAAAAACT...CCTCAAGTAAATCATTTGACTATGTAAATGGCAGTCAAGCAAGTACCAGCATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR-3UTR CCA 90 bp ATTGTCTACTTATCAACTTTTAGCTTTACCCTGGACTTTGGCAATGTTGTAGATCTGCATATTGAAACTTaGGGATCGAGACTGCTTGGT +
Preference number: 2 (lower is better)
Translates to: IVYLSTFSFTLDFGNVVDLHIET*GSRLLG
Trigger: ACCAAGCAGTCTCGATCCCCAAGTTTCAATATGCAG...ATCTACAACATTGCCAAAGTCCAGGGTAAAGCTAAAAGTTGATAAGTAGACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR-3UTR CCA 90 bp CAATGCTGGTACTTGCTTGACTGCCATTTACATAGTCAAATGATTTACTTGAGGGTAATGAGTTTTTCATaGCATTGGCAACCAATAGTG +
Preference number: 2 (lower is better)
Translates to: QCWYLLDCHLHSQMIYLRVMSFS*HWQPIV
Trigger: CACTATTGGTTGCCAATGCCATGAAAAACTCATTAC...CCTCAAGTAAATCATTTGACTATGTAAATGGCAGTCAAGCAAGTACCAGCATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR-3UTR TCA 90 bp ATTGTCTACTTATCAACTTTTAGCTTTACCCTGGACTTTGGCAATGTTGTAGATTTTACAAGGGATAGGTaGAGAGAAGATGTAGGAAAG +
Preference number: 2 (lower is better)
Translates to: IVYLSTFSFTLDFGNVVDFTRDR*REDVGK
Trigger: CTTTCCTACATCTTCTCTTCACCTATCCCTTGTAAA...ATCTACAACATTGCCAAAGTCCAGGGTAAAGCTAAAAGTTGATAAGTAGACAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
3UTR-3UTR GCA 90 bp CAAAGCACTGATAGCTCTGATGTATTCTGTGGAAGGATAACTTATAACAGTTTATGGTACTTGCTTGACTaGCATTTACATAGTCAAATG +
Preference number: 2 (lower is better)
Translates to: QSTDSSDVFCGRITYNSLWYLLD*HLHSQM
Trigger: CATTTGACTATGTAAATGGCAGTCAAGCAAGTACCA...TAAACTGTTATAAGTTATCCTTCCACAGAATACATCAGAGCTATCAGTGCTTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR-3UTR CCA 90 bp ATTGTCTACTTATCAACTTTTAGCTTTACCCTGGACTTTGGCAATGTTGTAGATTACACTAAGATCAGTTaGTTGCTGTACATACTGCTT +
Preference number: 2 (lower is better)
Translates to: IVYLSTFSFTLDFGNVVDYTKIS*LLYILL
Trigger: AAGCAGTATGTACAGCAACCAACTGATCTTAGTGTA...ATCTACAACATTGCCAAAGTCCAGGGTAAAGCTAAAAGTTGATAAGTAGACAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR-3UTR GCA 90 bp ATTGTCTACTTATCAACTTTTAGCTTTACCCTGGACTTTGGCAATGTTGTAGATGATGAAGTGTCTTCTTaGACAATGAAATGTTCAGTT +
Preference number: 2 (lower is better)
Translates to: IVYLSTFSFTLDFGNVVDDEVSS*TMKCSV
Trigger: AACTGAACATTTCATTGTGCAAGAAGACACTTCATC...ATCTACAACATTGCCAAAGTCCAGGGTAAAGCTAAAAGTTGATAAGTAGACAAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
3UTR-3UTR CCA 90 bp ATTGTCTACTTATCAACTTTTAGCTTTACCCTGGACTTTGGCAATGTTGTAGATATTGTTGAAGGTTCATaGTATATTGAAGGCTTGGAT +
Preference number: 2 (lower is better)
Translates to: IVYLSTFSFTLDFGNVVDIVEGS*YIEGLD
Trigger: ATCCAAGCCTTCAATATACCATGAACCTTCAACAAT...ATCTACAACATTGCCAAAGTCCAGGGTAAAGCTAAAAGTTGATAAGTAGACAAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR GCA 72 bp GTTGTGGCTGTTGCTGAGTTGGGCTCCGGCGAGCCATaGTCAGGGGTCCTGCGCACCAGCACCTCCCCCTCT +
Preference number: 3 (lower is better)
Translates to: VVAVAELGSGEP*SGVLRTSTSPS
Trigger: AGAGGGGGAGGTGCTGGTGCGCAGGACCCCTGAGCATGGCTCGCCGGAGCCCAACTCAGCAACAGCCACAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR CCA 72 bp CACCCTCAGCACCCTCTGTTGTGGCTGTTGCTGAGTTaGGCTCCGGCGAGCCATGCTCAGGGGTCCTGCGCA +
Preference number: 3 (lower is better)
Translates to: HPQHPLLWLLLS*APASHAQGSCA
Trigger: TGCGCAGGACCCCTGAGCATGGCTCGCCGGAGCCCAACTCAGCAACAGCCACAACAGAGGGTGCTGAGGGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR TCA 72 bp TCCTGCGCACCAGCACCTCCCCCTCTTGCACACGTTTaGTCCCTAGGTCAGTGGAGCCGTGTTGGATCGGGG +
Preference number: 3 (lower is better)
Translates to: SCAPAPPPLAHV*SLGQWSRVGSG
Trigger: CCCCGATCCAACACGGCTCCACTGACCTAGGGATCAAACGTGTGCAAGAGGGGGAGGTGCTGGTGCGCAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR GCA 72 bp TGCTCAGGGGTCCTGCGCACCAGCACCTCCCCCTCTTaGACACGTTTGATCCCTAGGTCAGTGGAGCCGTGT +
Preference number: 3 (lower is better)
Translates to: CSGVLRTSTSPS*TRLIPRSVEPC
Trigger: ACACGGCTCCACTGACCTAGGGATCAAACGTGTGCAAGAGGGGGAGGTGCTGGTGCGCAGGACCCCTGAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR TCA 72 bp ATTTACACCCTCAGCACCCTCTGTTGTGGCTGTTGCTaGGTTGGGCTCCGGCGAGCCATGCTCAGGGGTCCT +
Preference number: 3 (lower is better)
Translates to: IYTLSTLCCGCC*VGLRRAMLRGP
Trigger: AGGACCCCTGAGCATGGCTCGCCGGAGCCCAACTCAGCAACAGCCACAACAGAGGGTGCTGAGGGTGTAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR CCA 72 bp ACTTGGGGATCGAGACTGCTTGGTCAAGGGGGCTCCTaGGCTGAGGAGCTCTTTACCTTCGCCAGCTTGACC +
Preference number: 3 (lower is better)
Translates to: TWGSRLLGQGGS*AEELFTFASLT
Trigger: GGTCAAGCTGGCGAAGGTAAAGAGCTCCTCAGCCCAGGAGCCCCCTTGACCAAGCAGTCTCGATCCCCAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR TCA 72 bp GCTCCTGGGCTGAGGAGCTCTTTACCTTCGCCAGCTTaGCCTAGCCGGTCTTCCTGCAGACTGACAGTTGAG +
Preference number: 3 (lower is better)
Translates to: APGLRSSLPSPA*PSRSSCRLTVE
Trigger: CTCAACTGTCAGTCTGCAGGAAGACCGGCTAGGTCAAGCTGGCGAAGGTAAAGAGCTCCTCAGCCCAGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR CCA 72 bp TGCACACGTTTGATCCCTAGGTCAGTGGAGCCGTGTTaGATCGGGGAGCCAGGAATACTCGAGTCAGCCTCG +
Preference number: 3 (lower is better)
Translates to: CTRLIPRSVEPC*IGEPGILESAS
Trigger: CGAGGCTGACTCGAGTATTCCTGGCTCCCCGATCCAACACGGCTCCACTGACCTAGGGATCAAACGTGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR-3UTR CAA 90 bp CGTTTGATCCCTAGGTCAGTGGAGCCGTGTTGGATCGGGGAGCCAGGAATACTCCCAGTGTTTTTCATGTaGCCGTGGAAAGCCACTCAC +
Preference number: 3 (lower is better)
Translates to: RLIPRSVEPCWIGEPGILPVFFM*PWKATH
Trigger: GTGAGTGGCTTTCCACGGCAACATGAAAAACACTGG...GAGTATTCCTGGCTCCCCGATCCAACACGGCTCCACTGACCTAGGGATCAAACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR TCA 72 bp AGGAAGCACTGGCTGTCCGGATTAGACTTAAGCTATTaGTTTTTGGCACCACCTGGCCAGCAGGCAGGCTCA +
Preference number: 3 (lower is better)
Translates to: RKHWLSGLDLSY*FLAPPGQQAGS
Trigger: TGAGCCTGCCTGCTGGCCAGGTGGTGCCAAAAATCAATAGCTTAAGTCTAATCCGGACAGCCAGTGCTTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR TCA 72 bp GATCGGGGAGCCAGGAATACTCGAGTCAGCCTCGTTTaGGAAGTCAAAGCCATCTTCTCTTCTCCATCTATG +
Preference number: 3 (lower is better)
Translates to: DRGARNTRVSLV*EVKAIFSSPSM
Trigger: CATAGATGGAGAAGAGAAGATGGCTTTGACTTCTCAAACGAGGCTGACTCGAGTATTCCTGGCTCCCCGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR TCA 72 bp ACCCACTGCCTCCCCAAACCCATGGGAGACTGGGTTTaGTTCTGGCTCTGCTTTAGGTATATGATCTTGATC +
Preference number: 3 (lower is better)
Translates to: THCLPKPMGDWV*FWLCFRYMILI
Trigger: GATCAAGATCATATACCTAAAGCAGAGCCAGAATCAAACCCAGTCTCCCATGGGTTTGGGGAGGCAGTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418596.7
3UTR CCA 72 bp TCTCACAGTGTTGAAATGGGACCGATCAGCCTACGATaGATTGCACATCACCCAAGGAGAAAGGAAGGCATG +
Preference number: 3 (lower is better)
Translates to: SHSVEMGPISLR*IAHHPRRKEGM
Trigger: CATGCCTTCCTTTCTCCTTGGGTGATGTGCAATCCATCGTAGGCTGATCGGTCCCATTTCAACACTGTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
3UTR-3UTR CAA 90 bp CAATGCTGGTACTTGCTTGACTGCCATTTACATAGTCAAATGATTTACTTGAGGCCTCTGTTGTGGCTGTaGCTGAGTTGGGCTCCGGCG +
Preference number: 3 (lower is better)
Translates to: QCWYLLDCHLHSQMIYLRPLLWL*LSWAPA
Trigger: CGCCGGAGCCCAACTCAGCAACAGCCACAACAGAGG...CCTCAAGTAAATCATTTGACTATGTAAATGGCAGTCAAGCAAGTACCAGCATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR TCA 72 bp TGCGAACTACTGAATCTCGAGGGCTCTCACTGGATTTaGTGGCAGAGGCTGTTTCTTTATCCTTGGCTGAAC +
Preference number: 3 (lower is better)
Translates to: CELLNLEGSHWI*WQRLFLYPWLN
Trigger: GTTCAGCCAAGGATAAAGAAACAGCCTCTGCCATCAAATCCAGTGAGAGCCCTCGAGATTCAGTAGTTCGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR TCA 72 bp ATCAGTTGGTTGCTGTACATACTGCTTGCGAACTACTaGATCTCGAGGGCTCTCACTGGATTTGATGGCAGA +
Preference number: 3 (lower is better)
Translates to: ISWLLYILLANY*ISRALTGFDGR
Trigger: TCTGCCATCAAATCCAGTGAGAGCCCTCGAGATTCAGTAGTTCGCAAGCAGTATGTACAGCAACCAACTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR TCA 72 bp GATGTCAAAACTACACCTGGGATATTAGCTGCATATTaGAACTTGGGGATCGAGACTGCTTGGTCAAGGGGG +
Preference number: 3 (lower is better)
Translates to: DVKTTPGILAAY*NLGIETAWSRG
Trigger: CCCCCTTGACCAAGCAGTCTCGATCCCCAAGTTTCAATATGCAGCTAATATCCCAGGTGTAGTTTTGACATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR TCA 72 bp GCAGTCTACCACCTTTCCCCATGCTTCTCCAGAAAATaGTTGCACAGACTCAGAGAAGTCCAAAGTCATAGC +
Preference number: 3 (lower is better)
Translates to: AVYHLSPCFSRK*LHRLREVQSHS
Trigger: GCTATGACTTTGGACTTCTCTGAGTCTGTGCAATCATTTTCTGGAGAAGCATGGGGAAAGGTGGTAGACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
3UTR GCA 72 bp GAGGGAGGATGTCAAAACTACACCTGGGATATTAGCTaGATATTGAAACTTGGGGATCGAGACTGCTTGGTC +
Preference number: 3 (lower is better)
Translates to: EGGCQNYTWDIS*ILKLGDRDCLV
Trigger: GACCAAGCAGTCTCGATCCCCAAGTTTCAATATGCAGCTAATATCCCAGGTGTAGTTTTGACATCCTCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR-3UTR CAA 90 bp CAAAGCACTGATAGCTCTGATGTATTCTGTGGAAGGATAACTTATAACAGTTTAGTCAGTGGAGCCGTGTaGGATCGGGGAGCCAGGAAT +
Preference number: 3 (lower is better)
Translates to: QSTDSSDVFCGRITYNSLVSGAV*DRGARN
Trigger: ATTCCTGGCTCCCCGATCCAACACGGCTCCACTGAC...TAAACTGTTATAAGTTATCCTTCCACAGAATACATCAGAGCTATCAGTGCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR TCA 72 bp AAAGCCATCTTCTCTTCTCCATCTATGACGACGGATTaGAGCTGTTGTAATTGCAGTCCGAGAAATCCTCGG +
Preference number: 3 (lower is better)
Translates to: KAIFSSPSMTTD*SCCNCSPRNPR
Trigger: CCGAGGATTTCTCGGACTGCAATTACAACAGCTTCAATCCGTCGTCATAGATGGAGAAGAGAAGATGGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR GCA 72 bp GAATCTACACTAAGATCAGTTGGTTGCTGTACATACTaGTTGCGAACTACTGAATCTCGAGGGCTCTCACTG +
Preference number: 3 (lower is better)
Translates to: ESTLRSVGCCTY*LRTTESRGLSL
Trigger: CAGTGAGAGCCCTCGAGATTCAGTAGTTCGCAAGCAGTATGTACAGCAACCAACTGATCTTAGTGTAGATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR GCA 72 bp AATGTTGTACTTGTGTGGTCAGGTTCAGAAGAAATATaGCTACACAGGCAAGGAGGTTGGGTGGTGATGACT +
Preference number: 3 (lower is better)
Translates to: NVVLVWSGSEEI*LHRQGGWVVMT
Trigger: AGTCATCACCACCCAACCTCCTTGCCTGTGTAGGCATATTTCTTCTGAACCTGACCACACAAGTACAACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418596.7
3UTR CCA 72 bp TGTTGTAATTGCAGTCCGAGAAATCCTCGGCACTGTTaGAGTGACTTCAACTTTAAGGACTTTCTGGCCTTC +
Preference number: 3 (lower is better)
Translates to: CCNCSPRNPRHC*SDFNFKDFLAF
Trigger: GAAGGCCAGAAAGTCCTTAAAGTTGAAGTCACTCCAACAGTGCCGAGGATTTCTCGGACTGCAATTACAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR-3UTR CAA 90 bp TCAGCCTACGATGGATTGCACATCACCCAAGGAGAAAGGAAGGCATGGAAAAGGAAAGACAGAACTTTATaGTTCCCATCTTTATCAGCG +
Preference number: 3 (lower is better)
Translates to: SAYDGLHITQGERKAWKRKDRTL*FPSLSA
Trigger: CGCTGATAAAGATGGGAACAATAAAGTTCTGTCTTT...CCTTTTCCATGCCTTCCTTTCTCCTTGGGTGATGTGCAATCCATCGTAGGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR TCA 72 bp TTTGAGAAGTCAAAGCCATCTTCTCTTCTCCATCTATaGCGACGGATTGAAGCTGTTGTAATTGCAGTCCGA +
Preference number: 3 (lower is better)
Translates to: FEKSKPSSLLHL*RRIEAVVIAVR
Trigger: TCGGACTGCAATTACAACAGCTTCAATCCGTCGTCATAGATGGAGAAGAGAAGATGGCTTTGACTTCTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR TCA 72 bp CAGGCTCAGGTGTTTCTTCATTGGTGTCAGCTCAACTaGATCTACACTAAGATCAGTTGGTTGCTGTACATA +
Preference number: 3 (lower is better)
Translates to: QAQVFLHWCQLN*IYTKISWLLYI
Trigger: TATGTACAGCAACCAACTGATCTTAGTGTAGATTCAGTTGAGCTGACACCAATGAAGAAACACCTGAGCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR CCA 72 bp GATCATGCTGACACAATGCCCCTTCTGTCAAAGCCATaGATCCAATTGTTGAAGGTTCATGGTATATTGAAG +
Preference number: 3 (lower is better)
Translates to: DHADTMPLLSKP*IQLLKVHGILK
Trigger: CTTCAATATACCATGAACCTTCAACAATTGGATCCATGGCTTTGACAGAAGGGGCATTGTGTCAGCATGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR-3UTR CAA 90 bp CCTCTGAGGATGAAGATCACTATAAACAACTCTGATGAGATCATGCTGACACAATGGTATATTGAAGGCTaGGATAAGGAGGGGATAGTG +
Preference number: 3 (lower is better)
Translates to: PLRMKITINNSDEIMLTQWYIEG*DKEGIV
Trigger: CACTATCCCCTCCTTATCCAAGCCTTCAATATACCA...TTGTGTCAGCATGATCTCATCAGAGTTGTTTATAGTGATCTTCATCCTCAGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR-3UTR CAA 90 bp AGGATGAAGATCACTATAAACAACTCTGATGAGATCATGCTGACACAATGCCCCAAGCCATGGATCCAATaGTTGAAGGTTCATGGTATA +
Preference number: 3 (lower is better)
Translates to: RMKITINNSDEIMLTQCPKPWIQ*LKVHGI
Trigger: TATACCATGAACCTTCAACAATTGGATCCATGGCTT...GGGGCATTGTGTCAGCATGATCTCATCAGAGTTGTTTATAGTGATCTTCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR-3UTR CAA 90 bp CAAAGCACTGATAGCTCTGATGTATTCTGTGGAAGGATAACTTATAACAGTTTATGGCTGAACGCCCAGTaGCTACTTTCCTTAAGCTTC +
Preference number: 3 (lower is better)
Translates to: QSTDSSDVFCGRITYNSLWLNAQ*LLSLSF
Trigger: GAAGCTTAAGGAAAGTAGCAACTGGGCGTTCAGCCA...TAAACTGTTATAAGTTATCCTTCCACAGAATACATCAGAGCTATCAGTGCTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR-3UTR CAA 90 bp ATTGTCTACTTATCAACTTTTAGCTTTACCCTGGACTTTGGCAATGTTGTAGATTCAGCCTACGATGGATaGCACATCACCCAAGGAGAA +
Preference number: 3 (lower is better)
Translates to: IVYLSTFSFTLDFGNVVDSAYDG*HITQGE
Trigger: TTCTCCTTGGGTGATGTGCAATCCATCGTAGGCTGA...ATCTACAACATTGCCAAAGTCCAGGGTAAAGCTAAAAGTTGATAAGTAGACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
3UTR TCA 72 bp AACCCTGGAACCCATCCGACAAAGAGATTGGTAAGATaGGGCAGGCATATATACAATAGCAGAATTATAACA +
Preference number: 3 (lower is better)
Translates to: NPGTHPTKRLVR*GRHIYNSRIIT
Trigger: TGTTATAATTCTGCTATTGTATATATGCCTGCCTCATCTTACCAATCTCTTTGTCGGATGGGTTCCAGGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR TCA 72 bp AGTCTTTTTACCTCCCAAATAATTTATGCCATAAAGTaGCTGACCTCCAGCCATAGCCAAGATCTCACTTTC +
Preference number: 3 (lower is better)
Translates to: SLFTSQIIYAIK*LTSSHSQDLTF
Trigger: GAAAGTGAGATCTTGGCTATGGCTGGAGGTCAGTCACTTTATGGCATAAATTATTTGGGAGGTAAAAAGACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
3UTR-3UTR CAA 90 bp CAAAGCACTGATAGCTCTGATGTATTCTGTGGAAGGATAACTTATAACAGTTTAACTAAGATCAGTTGGTaGCTGTACATACTGCTTGCG +
Preference number: 3 (lower is better)
Translates to: QSTDSSDVFCGRITYNSLTKISW*LYILLA
Trigger: CGCAAGCAGTATGTACAGCAACCAACTGATCTTAGT...TAAACTGTTATAAGTTATCCTTCCACAGAATACATCAGAGCTATCAGTGCTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR GCA 72 bp CCAGAAGCAAAACATATACCTTACATTTCTGTACTATaGTGCCAGTTATTTCACATCATTCCCAGCTTTCTG +
Preference number: 3 (lower is better)
Translates to: PEAKHIPYISVL*CQLFHIIPSFL
Trigger: CAGAAAGCTGGGAATGATGTGAAATAACTGGCAGCATAGTACAGAAATGTAAGGTATATGTTTTGCTTCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418596.7
3UTR-3UTR CAA 90 bp CAAAGCACTGATAGCTCTGATGTATTCTGTGGAAGGATAACTTATAACAGTTTACCATGGATCCAATTGTaGAAGGTTCATGGTATATTG +
Preference number: 3 (lower is better)
Translates to: QSTDSSDVFCGRITYNSLPWIQL*KVHGIL
Trigger: CAATATACCATGAACCTTCAACAATTGGATCCATGG...TAAACTGTTATAAGTTATCCTTCCACAGAATACATCAGAGCTATCAGTGCTTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR TCA 72 bp TTACAAATGAACATGCAGAGATTTAAACGAGACAACTaGTTGTCAACAACTGAAGTACTCAAAAATGGACTC +
Preference number: 3 (lower is better)
Translates to: LQMNMQRFKRDN*LSTTEVLKNGL
Trigger: GAGTCCATTTTTGAGTACTTCAGTTGTTGACAATCAGTTGTCTCGTTTAAATCTCTGCATGTTCATTTGTAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418596.7
3UTR CCA 72 bp CACACTTTAAATGACATCATGGTCACTGTTCCATTATaGAATCATAAGCTTCACACTATAGAACCTTTTTCA +
Preference number: 3 (lower is better)
Translates to: HTLNDIMVTVPL*NHKLHTIEPFS
Trigger: TGAAAAAGGTTCTATAGTGTGAAGCTTATGATTCCATAATGGAACAGTGACCATGATGTCATTTAAAGTGTG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418596.7
3UTR CAA 72 bp ACACCCTCAGCACCCTCTGTTGTGGCTGTTGCTGAGTaGGGCTCCGGCGAGCCATGCTCAGGGGTCCTGCGC +
Preference number: 4 (lower is better)
Translates to: TPSAPSVVAVAE*GSGEPCSGVLR
Trigger: GCGCAGGACCCCTGAGCATGGCTCGCCGGAGCCCAACTCAGCAACAGCCACAACAGAGGGTGCTGAGGGTGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR CAA 72 bp GTCCTGCGCACCAGCACCTCCCCCTCTTGCACACGTTaGATCCCTAGGTCAGTGGAGCCGTGTTGGATCGGG +
Preference number: 4 (lower is better)
Translates to: VLRTSTSPSCTR*IPRSVEPCWIG
Trigger: CCCGATCCAACACGGCTCCACTGACCTAGGGATCAAACGTGTGCAAGAGGGGGAGGTGCTGGTGCGCAGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR GCA 90 bp CGTTTGATCCCTAGGTCAGTGGAGCCGTGTTGGATCGGGGAGCCAGGAATACTCCATGCTCAGGGGTCCTaGGCACCAGCACCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: RLIPRSVEPCWIGEPGILHAQGS*APAPPP
Trigger: AGGGGGAGGTGCTGGTGCGCAGGACCCCTGAGCATG...GAGTATTCCTGGCTCCCCGATCCAACACGGCTCCACTGACCTAGGGATCAAACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR GCA 90 bp CGTTTGATCCCTAGGTCAGTGGAGCCGTGTTGGATCGGGGAGCCAGGAATACTCCCAATTCTGTCACCCTaGTGTCTCCGGCTTCCTACC +
Preference number: 4 (lower is better)
Translates to: RLIPRSVEPCWIGEPGILPILSP*CLRLPT
Trigger: GGTAGGAAGCCGGAGACAGCAGGGTGACAGAATTGG...GAGTATTCCTGGCTCCCCGATCCAACACGGCTCCACTGACCTAGGGATCAAACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR TCA 90 bp CACCCTCAGCACCCTCTGTTGTGGCTGTTGCTGAGTTGGGCTCCGGCGAGCCATTTGCTGCATAACTGGTaGTCTGAGTGTCAGGTAATG +
Preference number: 4 (lower is better)
Translates to: HPQHPLLWLLLSWAPASHLLHNW*SECQVM
Trigger: CATTACCTGACACTCAGATCACCAGTTATGCAGCAA...ATGGCTCGCCGGAGCCCAACTCAGCAACAGCCACAACAGAGGGTGCTGAGGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR CCA 90 bp ATCCCTAGGTCAGTGGAGCCGTGTTGGATCGGGGAGCCAGGAATACTCGAGTCATGGTTTGGTCCCAATTaGCTGACTGCTGAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: IPRSVEPCWIGEPGILESWFGPN*LTAEGS
Trigger: GCTTCCCTCAGCAGTCAGCCAATTGGGACCAAACCA...TGACTCGAGTATTCCTGGCTCCCCGATCCAACACGGCTCCACTGACCTAGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR TCA 90 bp CACCCTCAGCACCCTCTGTTGTGGCTGTTGCTGAGTTGGGCTCCGGCGAGCCATTGGTGTCAGCTCAACTaGATCTACACTAAGATCAGT +
Preference number: 4 (lower is better)
Translates to: HPQHPLLWLLLSWAPASHWCQLN*IYTKIS
Trigger: ACTGATCTTAGTGTAGATTCAGTTGAGCTGACACCA...ATGGCTCGCCGGAGCCCAACTCAGCAACAGCCACAACAGAGGGTGCTGAGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR GCA 90 bp CACCCTCAGCACCCTCTGTTGTGGCTGTTGCTGAGTTGGGCTCCGGCGAGCCATGGTTGCTGTACATACTaGTTGCGAACTACTGAATCT +
Preference number: 4 (lower is better)
Translates to: HPQHPLLWLLLSWAPASHGCCTY*LRTTES
Trigger: AGATTCAGTAGTTCGCAAGCAGTATGTACAGCAACC...ATGGCTCGCCGGAGCCCAACTCAGCAACAGCCACAACAGAGGGTGCTGAGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR GCA 90 bp CACCCTCAGCACCCTCTGTTGTGGCTGTTGCTGAGTTGGGCTCCGGCGAGCCATCCCAATGCTGGTACTTaGTTGACTGCCATTTACATA +
Preference number: 4 (lower is better)
Translates to: HPQHPLLWLLLSWAPASHPNAGT*LTAIYI
Trigger: TATGTAAATGGCAGTCAAGCAAGTACCAGCATTGGG...ATGGCTCGCCGGAGCCCAACTCAGCAACAGCCACAACAGAGGGTGCTGAGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR CCA 90 bp CGTTTGATCCCTAGGTCAGTGGAGCCGTGTTGGATCGGGGAGCCAGGAATACTCCACTCACACAAACCCTaGAACCCATCCGACAAAGAG +
Preference number: 4 (lower is better)
Translates to: RLIPRSVEPCWIGEPGILHSHKP*NPSDKE
Trigger: CTCTTTGTCGGATGGGTTCCAGGGTTTGTGTGAGTG...GAGTATTCCTGGCTCCCCGATCCAACACGGCTCCACTGACCTAGGGATCAAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR CCA 90 bp ATCCCTAGGTCAGTGGAGCCGTGTTGGATCGGGGAGCCAGGAATACTCGAGTCATGCCAACCCCAATGCTaGTACTTGCTTGACTGCCAT +
Preference number: 4 (lower is better)
Translates to: IPRSVEPCWIGEPGILESCQPQC*YLLDCH
Trigger: ATGGCAGTCAAGCAAGTACCAGCATTGGGGTTGGCA...TGACTCGAGTATTCCTGGCTCCCCGATCCAACACGGCTCCACTGACCTAGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR CCA 90 bp ATCCCTAGGTCAGTGGAGCCGTGTTGGATCGGGGAGCCAGGAATACTCGAGTCAACAGTAGTGCATTCTTaGCTCACTGCAACCTCCACC +
Preference number: 4 (lower is better)
Translates to: IPRSVEPCWIGEPGILESTVVHS*LTATST
Trigger: GGTGGAGGTTGCAGTGAGCCAAGAATGCACTACTGT...TGACTCGAGTATTCCTGGCTCCCCGATCCAACACGGCTCCACTGACCTAGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR CAA 72 bp GAGGAAGCACTGGCTGTCCGGATTAGACTTAAGCTATaGATTTTTGGCACCACCTGGCCAGCAGGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: EEALAVRIRLKL*IFGTTWPAGRL
Trigger: GAGCCTGCCTGCTGGCCAGGTGGTGCCAAAAATCAATAGCTTAAGTCTAATCCGGACAGCCAGTGCTTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR TCA 90 bp TTGATCACACCACAACCTCTGAGCCTCTGTTTCTTGAGGATGAAGGTTGGGGTGTTGGTCCCAATTGGCTaGCTGCTGAGGGAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: LITPQPLSLCFLRMKVGVLVPIG*LLREAP
Trigger: AGGGGCTTCCCTCAGCAGTCAGCCAATTGGGACCAA...CACCCCAACCTTCATCCTCAAGAAACAGAGGCTCAGAGGTTGTGGTGTGATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418596.7
CDS-3UTR TCA 90 bp TCAGCCTACGATGGATTGCACATCACCCAAGGAGAAAGGAAGGCATGGAAAAGGCCTCTTGCACACGTTTaGTCCCTAGGTCAGTGGAGC +
Preference number: 4 (lower is better)
Translates to: SAYDGLHITQGERKAWKRPLAHV*SLGQWS
Trigger: GCTCCACTGACCTAGGGATCAAACGTGTGCAAGAGG...CCTTTTCCATGCCTTCCTTTCTCCTTGGGTGATGTGCAATCCATCGTAGGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR GCA 90 bp TTGATCACACCACAACCTCTGAGCCTCTGTTTCTTGAGGATGAAGGTTGGGGTGCCAATTCTGTCACCCTaGTGTCTCCGGCTTCCTACC +
Preference number: 4 (lower is better)
Translates to: LITPQPLSLCFLRMKVGVPILSP*CLRLPT
Trigger: GGTAGGAAGCCGGAGACAGCAGGGTGACAGAATTGG...CACCCCAACCTTCATCCTCAAGAAACAGAGGCTCAGAGGTTGTGGTGTGATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418596.7
CDS-3UTR CCA 90 bp ATCCCTAGGTCAGTGGAGCCGTGTTGGATCGGGGAGCCAGGAATACTCGAGTCACAGCAGAGGCACTCTTaGAGGCTGTATCTCATTATT +
Preference number: 4 (lower is better)
Translates to: IPRSVEPCWIGEPGILESQQRHS*RLYLII
Trigger: AATAATGAGATACAGCCTCCAAGAGTGCCTCTGCTG...TGACTCGAGTATTCCTGGCTCCCCGATCCAACACGGCTCCACTGACCTAGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR CCA 90 bp TTGATCACACCACAACCTCTGAGCCTCTGTTTCTTGAGGATGAAGGTTGGGGTGGTGGTGGTGCATGCCTaGAGTTCCAGCTACTCCAGA +
Preference number: 4 (lower is better)
Translates to: LITPQPLSLCFLRMKVGVVVVHA*SSSYSR
Trigger: TCTGGAGTAGCTGGAACTCCAGGCATGCACCACCAC...CACCCCAACCTTCATCCTCAAGAAACAGAGGCTCAGAGGTTGTGGTGTGATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418596.7
CDS-3UTR CCA 90 bp TCAGCCTACGATGGATTGCACATCACCCAAGGAGAAAGGAAGGCATGGAAAAGGCTTGAGGATGAAGGTTaGGGTGAGGGAGTGGGAGAC +
Preference number: 4 (lower is better)
Translates to: SAYDGLHITQGERKAWKRLEDEG*GEGVGD
Trigger: GTCTCCCACTCCCTCACCCCAACCTTCATCCTCAAG...CCTTTTCCATGCCTTCCTTTCTCCTTGGGTGATGTGCAATCCATCGTAGGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418596.7
CDS-3UTR TCA 90 bp TCAGCCTACGATGGATTGCACATCACCCAAGGAGAAAGGAAGGCATGGAAAAGGCAATTGGCTGACTGCTaGGGGAAGCCCCTGATGAAA +
Preference number: 4 (lower is better)
Translates to: SAYDGLHITQGERKAWKRQLADC*GKPLMK
Trigger: TTTCATCAGGGGCTTCCCTCAGCAGTCAGCCAATTG...CCTTTTCCATGCCTTCCTTTCTCCTTGGGTGATGTGCAATCCATCGTAGGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR TCA 90 bp TCAGCCTACGATGGATTGCACATCACCCAAGGAGAAAGGAAGGCATGGAAAAGGCTGCTTGCGAACTACTaGATCTCGAGGGCTCTCACT +
Preference number: 4 (lower is better)
Translates to: SAYDGLHITQGERKAWKRLLANY*ISRALT
Trigger: AGTGAGAGCCCTCGAGATTCAGTAGTTCGCAAGCAG...CCTTTTCCATGCCTTCCTTTCTCCTTGGGTGATGTGCAATCCATCGTAGGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR TCA 90 bp CGTTTGATCCCTAGGTCAGTGGAGCCGTGTTGGATCGGGGAGCCAGGAATACTCTTAGACTTAAGCTATTaGTTTTTGGCACCACCTGGC +
Preference number: 4 (lower is better)
Translates to: RLIPRSVEPCWIGEPGILLDLSY*FLAPPG
Trigger: GCCAGGTGGTGCCAAAAATCAATAGCTTAAGTCTAA...GAGTATTCCTGGCTCCCCGATCCAACACGGCTCCACTGACCTAGGGATCAAACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR GCA 90 bp TCAGCCTACGATGGATTGCACATCACCCAAGGAGAAAGGAAGGCATGGAAAAGGCAGTGCCAACCCCAATaGTGGTACTTGCTTGACTGC +
Preference number: 4 (lower is better)
Translates to: SAYDGLHITQGERKAWKRQCQPQ*WYLLDC
Trigger: GCAGTCAAGCAAGTACCAGCATTGGGGTTGGCACTG...CCTTTTCCATGCCTTCCTTTCTCCTTGGGTGATGTGCAATCCATCGTAGGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR GCA 90 bp TCAGCCTACGATGGATTGCACATCACCCAAGGAGAAAGGAAGGCATGGAAAAGGCACAATCAAGAGTCCTaGCCTCCAATGGAGGTGGTC +
Preference number: 4 (lower is better)
Translates to: SAYDGLHITQGERKAWKRHNQES*PPMEVV
Trigger: GACCACCTCCATTGGAGGGCAGGACTCTTGATTGTG...CCTTTTCCATGCCTTCCTTTCTCCTTGGGTGATGTGCAATCCATCGTAGGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR CCA 90 bp GCTTCTCCAGAAAATGATTGCACAGACTCAGAGAAGTCCAAAGTCATAGCAGAAGGGATCGAGACTGCTTaGTCAAGGGGGCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: ASPENDCTDSEKSKVIAEGIETA*SRGLLG
Trigger: GCCCAGGAGCCCCCTTGACCAAGCAGTCTCGATCCC...TTCTGCTATGACTTTGGACTTCTCTGAGTCTGTGCAATCATTTTCTGGAGAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
3UTR CAA 72 bp ATTAGCTGCATATTGAAACTTGGGGATCGAGACTGCTaGGTCAAGGGGGCTCCTGGGCTGAGGAGCTCTTTA +
Preference number: 4 (lower is better)
Translates to: ISCILKLGDRDC*VKGAPGLRSSL
Trigger: TAAAGAGCTCCTCAGCCCAGGAGCCCCCTTGACCAAGCAGTCTCGATCCCCAAGTTTCAATATGCAGCTAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR TCA 90 bp CCTCTGAGGATGAAGATCACTATAAACAACTCTGATGAGATCATGCTGACACAATGTTGTGGCTGTTGCTaGGTTGGGCTCCGGCGAGCC +
Preference number: 4 (lower is better)
Translates to: PLRMKITINNSDEIMLTQCCGCC*VGLRRA
Trigger: GGCTCGCCGGAGCCCAACTCAGCAACAGCCACAACA...TTGTGTCAGCATGATCTCATCAGAGTTGTTTATAGTGATCTTCATCCTCAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR TCA 90 bp TCAGCCTACGATGGATTGCACATCACCCAAGGAGAAAGGAAGGCATGGAAAAGGGGCTCTCACTGGATTTaGTGGCAGAGGCTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: SAYDGLHITQGERKAWKRGSHWI*WQRLFL
Trigger: AAGAAACAGCCTCTGCCATCAAATCCAGTGAGAGCC...CCTTTTCCATGCCTTCCTTTCTCCTTGGGTGATGTGCAATCCATCGTAGGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR TCA 90 bp CGTTTGATCCCTAGGTCAGTGGAGCCGTGTTGGATCGGGGAGCCAGGAATACTCTTTCACAATGTGGGATaGAGTGTCTTCTTGCACAAT +
Preference number: 4 (lower is better)
Translates to: RLIPRSVEPCWIGEPGILFHNVG*SVFLHN
Trigger: ATTGTGCAAGAAGACACTTCATCCCACATTGTGAAA...GAGTATTCCTGGCTCCCCGATCCAACACGGCTCCACTGACCTAGGGATCAAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR TCA 90 bp TTGATCACACCACAACCTCTGAGCCTCTGTTTCTTGAGGATGAAGGTTGGGGTGTCAGTCTCACAGTGTTaGAATGGGACCGATCAGCCT +
Preference number: 4 (lower is better)
Translates to: LITPQPLSLCFLRMKVGVSVSQC*NGTDQP
Trigger: AGGCTGATCGGTCCCATTTCAACACTGTGAGACTGA...CACCCCAACCTTCATCCTCAAGAAACAGAGGCTCAGAGGTTGTGGTGTGATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418596.7
CDS-3UTR GCA 90 bp ATCCCTAGGTCAGTGGAGCCGTGTTGGATCGGGGAGCCAGGAATACTCGAGTCAAATTCTGGCAAGAACTaGAGTGTGAACCTCTTAAGT +
Preference number: 4 (lower is better)
Translates to: IPRSVEPCWIGEPGILESNSGKN*SVNLLS
Trigger: ACTTAAGAGGTTCACACTGCAGTTCTTGCCAGAATT...TGACTCGAGTATTCCTGGCTCCCCGATCCAACACGGCTCCACTGACCTAGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR GCA 90 bp ATTGTCTACTTATCAACTTTTAGCTTTACCCTGGACTTTGGCAATGTTGTAGATGGCTCCGGCGAGCCATaGTCAGGGGTCCTGCGCACC +
Preference number: 4 (lower is better)
Translates to: IVYLSTFSFTLDFGNVVDGSGEP*SGVLRT
Trigger: GGTGCGCAGGACCCCTGAGCATGGCTCGCCGGAGCC...ATCTACAACATTGCCAAAGTCCAGGGTAAAGCTAAAAGTTGATAAGTAGACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR CCA 90 bp AGGATGAAGATCACTATAAACAACTCTGATGAGATCATGCTGACACAATGCCCCTGGCTGTTGCTGAGTTaGGCTCCGGCGAGCCATGCT +
Preference number: 4 (lower is better)
Translates to: RMKITINNSDEIMLTQCPWLLLS*APASHA
Trigger: AGCATGGCTCGCCGGAGCCCAACTCAGCAACAGCCA...GGGGCATTGTGTCAGCATGATCTCATCAGAGTTGTTTATAGTGATCTTCATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR CCA 90 bp TTGATCACACCACAACCTCTGAGCCTCTGTTTCTTGAGGATGAAGGTTGGGGTGAAGAGGAGGATGGTTTaGTCCCAATTGGCTGACTGC +
Preference number: 4 (lower is better)
Translates to: LITPQPLSLCFLRMKVGVKRRMV*SQLADC
Trigger: GCAGTCAGCCAATTGGGACCAAACCATCCTCCTCTT...CACCCCAACCTTCATCCTCAAGAAACAGAGGCTCAGAGGTTGTGGTGTGATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418596.7
CDS-3UTR TCA 90 bp GCTTCTCCAGAAAATGATTGCACAGACTCAGAGAAGTCCAAAGTCATAGCAGAATTACCTTCGCCAGCTTaGCCTAGCCGGTCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: ASPENDCTDSEKSKVIAELPSPA*PSRSSC
Trigger: GCAGGAAGACCGGCTAGGTCAAGCTGGCGAAGGTAA...TTCTGCTATGACTTTGGACTTCTCTGAGTCTGTGCAATCATTTTCTGGAGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR TCA 90 bp CGTTTGATCCCTAGGTCAGTGGAGCCGTGTTGGATCGGGGAGCCAGGAATACTCAAAAATGTGTCACATTaGAGTATCAGTGTTTCAGCC +
Preference number: 4 (lower is better)
Translates to: RLIPRSVEPCWIGEPGILKNVSH*SISVSA
Trigger: GGCTGAAACACTGATACTTCAATGTGACACATTTTT...GAGTATTCCTGGCTCCCCGATCCAACACGGCTCCACTGACCTAGGGATCAAACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR CCA 90 bp CGTTTGATCCCTAGGTCAGTGGAGCCGTGTTGGATCGGGGAGCCAGGAATACTCGTAATGAGTTTTTCATaGCATTGGCAACCAATAGTG +
Preference number: 4 (lower is better)
Translates to: RLIPRSVEPCWIGEPGILVMSFS*HWQPIV
Trigger: CACTATTGGTTGCCAATGCCATGAAAAACTCATTAC...GAGTATTCCTGGCTCCCCGATCCAACACGGCTCCACTGACCTAGGGATCAAACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR CCA 90 bp CGTTTGATCCCTAGGTCAGTGGAGCCGTGTTGGATCGGGGAGCCAGGAATACTCTACACTAAGATCAGTTaGTTGCTGTACATACTGCTT +
Preference number: 4 (lower is better)
Translates to: RLIPRSVEPCWIGEPGILYTKIS*LLYILL
Trigger: AAGCAGTATGTACAGCAACCAACTGATCTTAGTGTA...GAGTATTCCTGGCTCCCCGATCCAACACGGCTCCACTGACCTAGGGATCAAACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR CCA 90 bp CCTCTGAGGATGAAGATCACTATAAACAACTCTGATGAGATCATGCTGACACAAGGTCAAGGGGGCTCCTaGGCTGAGGAGCTCTTTACC +
Preference number: 4 (lower is better)
Translates to: PLRMKITINNSDEIMLTQGQGGS*AEELFT
Trigger: GGTAAAGAGCTCCTCAGCCCAGGAGCCCCCTTGACC...TTGTGTCAGCATGATCTCATCAGAGTTGTTTATAGTGATCTTCATCCTCAGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR CCA 90 bp ATCCCTAGGTCAGTGGAGCCGTGTTGGATCGGGGAGCCAGGAATACTCGAGTCATGTCAAAACTACACCTaGGATATTAGCTGCATATTG +
Preference number: 4 (lower is better)
Translates to: IPRSVEPCWIGEPGILESCQNYT*DISCIL
Trigger: CAATATGCAGCTAATATCCCAGGTGTAGTTTTGACA...TGACTCGAGTATTCCTGGCTCCCCGATCCAACACGGCTCCACTGACCTAGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR CCA 90 bp TTGATCACACCACAACCTCTGAGCCTCTGTTTCTTGAGGATGAAGGTTGGGGTGCCTTATATGTCCTTGTaGGGAAGAGGGAAGACACGT +
Preference number: 4 (lower is better)
Translates to: LITPQPLSLCFLRMKVGVPYMSL*GRGKTR
Trigger: ACGTGTCTTCCCTCTTCCCCACAAGGACATATAAGG...CACCCCAACCTTCATCCTCAAGAAACAGAGGCTCAGAGGTTGTGGTGTGATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418596.7
CDS-3UTR CCA 90 bp ATCCCTAGGTCAGTGGAGCCGTGTTGGATCGGGGAGCCAGGAATACTCGAGTCACATTTTCACATGAGCTaGAAAAATGTTACAGACCAC +
Preference number: 4 (lower is better)
Translates to: IPRSVEPCWIGEPGILESHFHMS*KNVTDH
Trigger: GTGGTCTGTAACATTTTTCCAGCTCATGTGAAAATG...TGACTCGAGTATTCCTGGCTCCCCGATCCAACACGGCTCCACTGACCTAGGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR TCA 90 bp TCAGCCTACGATGGATTGCACATCACCCAAGGAGAAAGGAAGGCATGGAAAAGGTCTCTTCTCCATCTATaGCGACGGATTGAAGCTGTT +
Preference number: 4 (lower is better)
Translates to: SAYDGLHITQGERKAWKRSLLHL*RRIEAV
Trigger: AACAGCTTCAATCCGTCGTCATAGATGGAGAAGAGA...CCTTTTCCATGCCTTCCTTTCTCCTTGGGTGATGTGCAATCCATCGTAGGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR TCA 90 bp TTGATCACACCACAACCTCTGAGCCTCTGTTTCTTGAGGATGAAGGTTGGGGTGTCTCTTCTCCATCTATaGCGACGGATTGAAGCTGTT +
Preference number: 4 (lower is better)
Translates to: LITPQPLSLCFLRMKVGVSLLHL*RRIEAV
Trigger: AACAGCTTCAATCCGTCGTCATAGATGGAGAAGAGA...CACCCCAACCTTCATCCTCAAGAAACAGAGGCTCAGAGGTTGTGGTGTGATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418596.7
CDS-3UTR TCA 90 bp TCAGCCTACGATGGATTGCACATCACCCAAGGAGAAAGGAAGGCATGGAAAAGGATTTATGCCATAAAGTaGCTGACCTCCAGCCATAGC +
Preference number: 4 (lower is better)
Translates to: SAYDGLHITQGERKAWKRIYAIK*LTSSHS
Trigger: GCTATGGCTGGAGGTCAGTCACTTTATGGCATAAAT...CCTTTTCCATGCCTTCCTTTCTCCTTGGGTGATGTGCAATCCATCGTAGGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR GCA 90 bp TTGATCACACCACAACCTCTGAGCCTCTGTTTCTTGAGGATGAAGGTTGGGGTGATCATGCTGACACAATaGCCCTTCTGTCAAAGCCAT +
Preference number: 4 (lower is better)
Translates to: LITPQPLSLCFLRMKVGVIMLTQ*PFCQSH
Trigger: ATGGCTTTGACAGAAGGGGCATTGTGTCAGCATGAT...CACCCCAACCTTCATCCTCAAGAAACAGAGGCTCAGAGGTTGTGGTGTGATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418596.7
CDS-3UTR GCA 90 bp TTGATCACACCACAACCTCTGAGCCTCTGTTTCTTGAGGATGAAGGTTGGGGTGACCCCTGTGAGAAGTTaGACCATAAATTCAGGATCC +
Preference number: 4 (lower is better)
Translates to: LITPQPLSLCFLRMKVGVTPVRS*TINSGS
Trigger: GGATCCTGAATTTATGGTGCAACTTCTCACAGGGGT...CACCCCAACCTTCATCCTCAAGAAACAGAGGCTCAGAGGTTGTGGTGTGATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418596.7
CDS-3UTR GCA 90 bp GCTTCTCCAGAAAATGATTGCACAGACTCAGAGAAGTCCAAAGTCATAGCAGAAAGCACCTCCCCCTCTTaGACACGTTTGATCCCTAGG +
Preference number: 4 (lower is better)
Translates to: ASPENDCTDSEKSKVIAESTSPS*TRLIPR
Trigger: CCTAGGGATCAAACGTGTGCAAGAGGGGGAGGTGCT...TTCTGCTATGACTTTGGACTTCTCTGAGTCTGTGCAATCATTTTCTGGAGAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR CCA 90 bp GCTTCTCCAGAAAATGATTGCACAGACTCAGAGAAGTCCAAAGTCATAGCAGAATTCTGGGAGGCCAGGTaGGTGGATCTCTTAAGCCCA +
Preference number: 4 (lower is better)
Translates to: ASPENDCTDSEKSKVIAEFWEAR*VDLLSP
Trigger: TGGGCTTAAGAGATCCACCCACCTGGCCTCCCAGAA...TTCTGCTATGACTTTGGACTTCTCTGAGTCTGTGCAATCATTTTCTGGAGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418596.7
CDS-3UTR TCA 90 bp GCTTCTCCAGAAAATGATTGCACAGACTCAGAGAAGTCCAAAGTCATAGCAGAACTGCTTGCGAACTACTaGATCTCGAGGGCTCTCACT +
Preference number: 4 (lower is better)
Translates to: ASPENDCTDSEKSKVIAELLANY*ISRALT
Trigger: AGTGAGAGCCCTCGAGATTCAGTAGTTCGCAAGCAG...TTCTGCTATGACTTTGGACTTCTCTGAGTCTGTGCAATCATTTTCTGGAGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR TCA 90 bp TTGATCACACCACAACCTCTGAGCCTCTGTTTCTTGAGGATGAAGGTTGGGGTGTTAGACTTAAGCTATTaGTTTTTGGCACCACCTGGC +
Preference number: 4 (lower is better)
Translates to: LITPQPLSLCFLRMKVGVLDLSY*FLAPPG
Trigger: GCCAGGTGGTGCCAAAAATCAATAGCTTAAGTCTAA...CACCCCAACCTTCATCCTCAAGAAACAGAGGCTCAGAGGTTGTGGTGTGATCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418596.7
CDS-3UTR TCA 90 bp TCAGCCTACGATGGATTGCACATCACCCAAGGAGAAAGGAAGGCATGGAAAAGGCCAAACCTGTATCAGTaGTTGTTAGAAAGCCAATCC +
Preference number: 4 (lower is better)
Translates to: SAYDGLHITQGERKAWKRPNLYQ*LLESQS
Trigger: GGATTGGCTTTCTAACAATCACTGATACAGGTTTGG...CCTTTTCCATGCCTTCCTTTCTCCTTGGGTGATGTGCAATCCATCGTAGGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418596.7
CDS-3UTR TCA 90 bp TTGATCACACCACAACCTCTGAGCCTCTGTTTCTTGAGGATGAAGGTTGGGGTGTCACTAGTCCTAGGTTaGAAGGACATCACTCAATAC +
Preference number: 4 (lower is better)
Translates to: LITPQPLSLCFLRMKVGVSLVLG*KDITQY
Trigger: GTATTGAGTGATGTCCTTTCAACCTAGGACTAGTGA...CACCCCAACCTTCATCCTCAAGAAACAGAGGCTCAGAGGTTGTGGTGTGATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418596.7
CDS-3UTR GCA 90 bp TCAGCCTACGATGGATTGCACATCACCCAAGGAGAAAGGAAGGCATGGAAAAGGGGTTGCTGTACATACTaGTTGCGAACTACTGAATCT +
Preference number: 4 (lower is better)
Translates to: SAYDGLHITQGERKAWKRGCCTY*LRTTES
Trigger: AGATTCAGTAGTTCGCAAGCAGTATGTACAGCAACC...CCTTTTCCATGCCTTCCTTTCTCCTTGGGTGATGTGCAATCCATCGTAGGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR GCA 90 bp GCTTCTCCAGAAAATGATTGCACAGACTCAGAGAAGTCCAAAGTCATAGCAGAAGAGTTAACAACCCACTaGCTCCCCAAACCCATGGGA +
Preference number: 4 (lower is better)
Translates to: ASPENDCTDSEKSKVIAEELTTH*LPKPMG
Trigger: TCCCATGGGTTTGGGGAGGCAGTGGGTTGTTAACTC...TTCTGCTATGACTTTGGACTTCTCTGAGTCTGTGCAATCATTTTCTGGAGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418596.7
CDS-3UTR CCA 90 bp TCAGCCTACGATGGATTGCACATCACCCAAGGAGAAAGGAAGGCATGGAAAAGGTTTTTCATGTTGCCGTaGAAAGCCACTCACACAAAC +
Preference number: 4 (lower is better)
Translates to: SAYDGLHITQGERKAWKRFFMLP*KATHTN
Trigger: GTTTGTGTGAGTGGCTTTCCACGGCAACATGAAAAA...CCTTTTCCATGCCTTCCTTTCTCCTTGGGTGATGTGCAATCCATCGTAGGCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR CCA 90 bp GATCCAATTGTTGAAGGTTCATGGTATATTGAAGGCTTGGATAAGGAGGGGATATCAGTGGAGCCGTGTTaGATCGGGGAGCCAGGAATA +
Preference number: 4 (lower is better)
Translates to: DPIVEGSWYIEGLDKEGISVEPC*IGEPGI
Trigger: TATTCCTGGCTCCCCGATCCAACACGGCTCCACTGA...TATCCCCTCCTTATCCAAGCCTTCAATATACCATGAACCTTCAACAATTGGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR CCA 90 bp GCTTCTCCAGAAAATGATTGCACAGACTCAGAGAAGTCCAAAGTCATAGCAGAATGGTTTGGTCCCAATTaGCTGACTGCTGAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: ASPENDCTDSEKSKVIAEWFGPN*LTAEGS
Trigger: GCTTCCCTCAGCAGTCAGCCAATTGGGACCAAACCA...TTCTGCTATGACTTTGGACTTCTCTGAGTCTGTGCAATCATTTTCTGGAGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR CCA 90 bp ATTGTCTACTTATCAACTTTTAGCTTTACCCTGGACTTTGGCAATGTTGTAGATGGGATCGAGACTGCTTaGTCAAGGGGGCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: IVYLSTFSFTLDFGNVVDGIETA*SRGLLG
Trigger: GCCCAGGAGCCCCCTTGACCAAGCAGTCTCGATCCC...ATCTACAACATTGCCAAAGTCCAGGGTAAAGCTAAAAGTTGATAAGTAGACAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR CCA 90 bp TCAGCCTACGATGGATTGCACATCACCCAAGGAGAAAGGAAGGCATGGAAAAGGATCCAAGGTCAGAAATaGACAGATATTCCTTGCCAG +
Preference number: 4 (lower is better)
Translates to: SAYDGLHITQGERKAWKRIQGQK*TDIPCQ
Trigger: CTGGCAAGGAATATCTGTCCATTTCTGACCTTGGAT...CCTTTTCCATGCCTTCCTTTCTCCTTGGGTGATGTGCAATCCATCGTAGGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418596.7
CDS-3UTR CCA 90 bp GCTTCTCCAGAAAATGATTGCACAGACTCAGAGAAGTCCAAAGTCATAGCAGAACACAGGCAAGGAGGTTaGGTGGTGATGACTCCTCTA +
Preference number: 4 (lower is better)
Translates to: ASPENDCTDSEKSKVIAEHRQGG*VVMTPL
Trigger: TAGAGGAGTCATCACCACCCAACCTCCTTGCCTGTG...TTCTGCTATGACTTTGGACTTCTCTGAGTCTGTGCAATCATTTTCTGGAGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418596.7
3UTR CAA 72 bp TTGCGAACTACTGAATCTCGAGGGCTCTCACTGGATTaGATGGCAGAGGCTGTTTCTTTATCCTTGGCTGAA +
Preference number: 4 (lower is better)
Translates to: LRTTESRGLSLD*MAEAVSLSLAE
Trigger: TTCAGCCAAGGATAAAGAAACAGCCTCTGCCATCAAATCCAGTGAGAGCCCTCGAGATTCAGTAGTTCGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR CAA 72 bp TCCTGCAGACTGACAGTTGAGTATCGATTAGCATTGTaGGCTGCTAAATTAGTACCTCCCTCAGTGCCAACC +
Preference number: 4 (lower is better)
Translates to: SCRLTVEYRLAL*AAKLVPPSVPT
Trigger: GGTTGGCACTGAGGGAGGTACTAATTTAGCAGCCAACAATGCTAATCGATACTCAACTGTCAGTCTGCAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR CAA 72 bp GGATGTCAAAACTACACCTGGGATATTAGCTGCATATaGAAACTTGGGGATCGAGACTGCTTGGTCAAGGGG +
Preference number: 4 (lower is better)
Translates to: GCQNYTWDISCI*KLGDRDCLVKG
Trigger: CCCCTTGACCAAGCAGTCTCGATCCCCAAGTTTCAATATGCAGCTAATATCCCAGGTGTAGTTTTGACATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR TCA 90 bp AGGATGAAGATCACTATAAACAACTCTGATGAGATCATGCTGACACAATGCCCCCTGATGAGATCATGCTaGCACAATGCCCCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: RMKITINNSDEIMLTQCPLMRSC*HNAPSV
Trigger: GACAGAAGGGGCATTGTGTCAGCATGATCTCATCAG...GGGGCATTGTGTCAGCATGATCTCATCAGAGTTGTTTATAGTGATCTTCATCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR TCA 90 bp TTGATCACACCACAACCTCTGAGCCTCTGTTTCTTGAGGATGAAGGTTGGGGTGGCTGGGCTCTATAAATaGTATCATCAAGAACTTCCT +
Preference number: 4 (lower is better)
Translates to: LITPQPLSLCFLRMKVGVAGLYK*YHQELP
Trigger: AGGAAGTTCTTGATGATATCATTTATAGAGCCCAGC...CACCCCAACCTTCATCCTCAAGAAACAGAGGCTCAGAGGTTGTGGTGTGATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418596.7
CDS-3UTR TCA 90 bp TCAGCCTACGATGGATTGCACATCACCCAAGGAGAAAGGAAGGCATGGAAAAGGATCCCTCTCTTTACCTaGAGATGTACTGTTACACTT +
Preference number: 4 (lower is better)
Translates to: SAYDGLHITQGERKAWKRIPLFT*RCTVTL
Trigger: AAGTGTAACAGTACATCTTCAGGTAAAGAGAGGGAT...CCTTTTCCATGCCTTCCTTTCTCCTTGGGTGATGTGCAATCCATCGTAGGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR GCA 90 bp GCTTCTCCAGAAAATGATTGCACAGACTCAGAGAAGTCCAAAGTCATAGCAGAACCTAGCCGGTCTTCCTaGAGACTGACAGTTGAGTAT +
Preference number: 4 (lower is better)
Translates to: ASPENDCTDSEKSKVIAEPSRSS*RLTVEY
Trigger: ATACTCAACTGTCAGTCTGCAGGAAGACCGGCTAGG...TTCTGCTATGACTTTGGACTTCTCTGAGTCTGTGCAATCATTTTCTGGAGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR GCA 90 bp CCTCTGAGGATGAAGATCACTATAAACAACTCTGATGAGATCATGCTGACACAACACAATCAAGAGTCCTaGCCTCCAATGGAGGTGGTC +
Preference number: 4 (lower is better)
Translates to: PLRMKITINNSDEIMLTQHNQES*PPMEVV
Trigger: GACCACCTCCATTGGAGGGCAGGACTCTTGATTGTG...TTGTGTCAGCATGATCTCATCAGAGTTGTTTATAGTGATCTTCATCCTCAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR GCA 90 bp GCAGTCCGAGAAATCCTCGGCACTGTTGGAGTGACTTCAACTTTAAGGACTTTCCTGGGAAATAGAACATaGCCCTCAGATTCTGATTTG +
Preference number: 4 (lower is better)
Translates to: AVREILGTVGVTSTLRTFLGNRT*PSDSDL
Trigger: CAAATCAGAATCTGAGGGGCATGTTCTATTTCCCAG...GAAAGTCCTTAAAGTTGAAGTCACTCCAACAGTGCCGAGGATTTCTCGGACTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR CCA 90 bp GCTTCTCCAGAAAATGATTGCACAGACTCAGAGAAGTCCAAAGTCATAGCAGAACACTCACACAAACCCTaGAACCCATCCGACAAAGAG +
Preference number: 4 (lower is better)
Translates to: ASPENDCTDSEKSKVIAEHSHKP*NPSDKE
Trigger: CTCTTTGTCGGATGGGTTCCAGGGTTTGTGTGAGTG...TTCTGCTATGACTTTGGACTTCTCTGAGTCTGTGCAATCATTTTCTGGAGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR CCA 90 bp GCTTCTCCAGAAAATGATTGCACAGACTCAGAGAAGTCCAAAGTCATAGCAGAAAAGAGGAGGATGGTTTaGTCCCAATTGGCTGACTGC +
Preference number: 4 (lower is better)
Translates to: ASPENDCTDSEKSKVIAEKRRMV*SQLADC
Trigger: GCAGTCAGCCAATTGGGACCAAACCATCCTCCTCTT...TTCTGCTATGACTTTGGACTTCTCTGAGTCTGTGCAATCATTTTCTGGAGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR CCA 90 bp CAAAGCACTGATAGCTCTGATGTATTCTGTGGAAGGATAACTTATAACAGTTTAGGTCAAGGGGGCTCCTaGGCTGAGGAGCTCTTTACC +
Preference number: 4 (lower is better)
Translates to: QSTDSSDVFCGRITYNSLGQGGS*AEELFT
Trigger: GGTAAAGAGCTCCTCAGCCCAGGAGCCCCCTTGACC...TAAACTGTTATAAGTTATCCTTCCACAGAATACATCAGAGCTATCAGTGCTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR CCA 90 bp TTGATCACACCACAACCTCTGAGCCTCTGTTTCTTGAGGATGAAGGTTGGGGTGTTCTTTTATCCAACTTaGCATACATGGCACCAACCT +
Preference number: 4 (lower is better)
Translates to: LITPQPLSLCFLRMKVGVFFYPT*HTWHQP
Trigger: AGGTTGGTGCCATGTATGCCAAGTTGGATAAAAGAA...CACCCCAACCTTCATCCTCAAGAAACAGAGGCTCAGAGGTTGTGGTGTGATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418596.7
3UTR CAA 72 bp TCACTGGATTTGATGGCAGAGGCTGTTTCTTTATCCTaGGCTGAACGCCCAGTTGCTACTTTCCTTAAGCTT +
Preference number: 4 (lower is better)
Translates to: SLDLMAEAVSLS*AERPVATFLKL
Trigger: AAGCTTAAGGAAAGTAGCAACTGGGCGTTCAGCCAAGGATAAAGAAACAGCCTCTGCCATCAAATCCAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR CAA 72 bp TCTACACTAAGATCAGTTGGTTGCTGTACATACTGCTaGCGAACTACTGAATCTCGAGGGCTCTCACTGGAT +
Preference number: 4 (lower is better)
Translates to: STLRSVGCCTYC*RTTESRGLSLD
Trigger: ATCCAGTGAGAGCCCTCGAGATTCAGTAGTTCGCAAGCAGTATGTACAGCAACCAACTGATCTTAGTGTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286181.7
3UTR CAA 72 bp TCTTCCTGCAGACTGACAGTTGAGTATCGATTAGCATaGTTGGCTGCTAAATTAGTACCTCCCTCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: SSCRLTVEYRLA*LAAKLVPPSVP
Trigger: TGGCACTGAGGGAGGTACTAATTTAGCAGCCAACAATGCTAATCGATACTCAACTGTCAGTCTGCAGGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR TCA 90 bp TTGATCACACCACAACCTCTGAGCCTCTGTTTCTTGAGGATGAAGGTTGGGGTGAAGAGATTGGTAAGATaGGGCAGGCATATATACAAT +
Preference number: 4 (lower is better)
Translates to: LITPQPLSLCFLRMKVGVKRLVR*GRHIYN
Trigger: ATTGTATATATGCCTGCCTCATCTTACCAATCTCTT...CACCCCAACCTTCATCCTCAAGAAACAGAGGCTCAGAGGTTGTGGTGTGATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418596.7
CDS-3UTR TCA 90 bp GATCCAATTGTTGAAGGTTCATGGTATATTGAAGGCTTGGATAAGGAGGGGATACGAGTCAGCCTCGTTTaGGAAGTCAAAGCCATCTTC +
Preference number: 4 (lower is better)
Translates to: DPIVEGSWYIEGLDKEGIRVSLV*EVKAIF
Trigger: GAAGATGGCTTTGACTTCTCAAACGAGGCTGACTCG...TATCCCCTCCTTATCCAAGCCTTCAATATACCATGAACCTTCAACAATTGGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR TCA 90 bp CAAAGCACTGATAGCTCTGATGTATTCTGTGGAAGGATAACTTATAACAGTTTATTGGTCCCAATTGGCTaGCTGCTGAGGGAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: QSTDSSDVFCGRITYNSLLVPIG*LLREAP
Trigger: AGGGGCTTCCCTCAGCAGTCAGCCAATTGGGACCAA...TAAACTGTTATAAGTTATCCTTCCACAGAATACATCAGAGCTATCAGTGCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR TCA 90 bp ATTGTCTACTTATCAACTTTTAGCTTTACCCTGGACTTTGGCAATGTTGTAGATTTACCTTCGCCAGCTTaGCCTAGCCGGTCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: IVYLSTFSFTLDFGNVVDLPSPA*PSRSSC
Trigger: GCAGGAAGACCGGCTAGGTCAAGCTGGCGAAGGTAA...ATCTACAACATTGCCAAAGTCCAGGGTAAAGCTAAAAGTTGATAAGTAGACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR TCA 90 bp TTGATCACACCACAACCTCTGAGCCTCTGTTTCTTGAGGATGAAGGTTGGGGTGAAAAATGTGTCACATTaGAGTATCAGTGTTTCAGCC +
Preference number: 4 (lower is better)
Translates to: LITPQPLSLCFLRMKVGVKNVSH*SISVSA
Trigger: GGCTGAAACACTGATACTTCAATGTGACACATTTTT...CACCCCAACCTTCATCCTCAAGAAACAGAGGCTCAGAGGTTGTGGTGTGATCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418596.7
CDS-3UTR TCA 90 bp ATTGTCTACTTATCAACTTTTAGCTTTACCCTGGACTTTGGCAATGTTGTAGATAGGTTGAGGCTGCAGTaGGCCGTGATAGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: IVYLSTFSFTLDFGNVVDRLRLQ*AVIVPL
Trigger: CAGTGGCACTATCACGGCTCACTGCAGCCTCAACCT...ATCTACAACATTGCCAAAGTCCAGGGTAAAGCTAAAAGTTGATAAGTAGACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418596.7
CDS-3UTR TCA 90 bp TTGATCACACCACAACCTCTGAGCCTCTGTTTCTTGAGGATGAAGGTTGGGGTGATAACTAGAAAACACTaGTCAAAGCCATTTCACAGG +
Preference number: 4 (lower is better)
Translates to: LITPQPLSLCFLRMKVGVITRKH*SKPFHR
Trigger: CCTGTGAAATGGCTTTGATCAGTGTTTTCTAGTTAT...CACCCCAACCTTCATCCTCAAGAAACAGAGGCTCAGAGGTTGTGGTGTGATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418596.7
CDS-3UTR TCA 90 bp TTGATCACACCACAACCTCTGAGCCTCTGTTTCTTGAGGATGAAGGTTGGGGTGCTACTAGATGGAATCTaGGAATACAGACTGGAAATA +
Preference number: 4 (lower is better)
Translates to: LITPQPLSLCFLRMKVGVLLDGI*EYRLEI
Trigger: TATTTCCAGTCTGTATTCTCAGATTCCATCTAGTAG...CACCCCAACCTTCATCCTCAAGAAACAGAGGCTCAGAGGTTGTGGTGTGATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418596.7
CDS-3UTR GCA 90 bp GCTTCTCCAGAAAATGATTGCACAGACTCAGAGAAGTCCAAAGTCATAGCAGAACAGCCTACGATGGATTaGACATCACCCAAGGAGAAA +
Preference number: 4 (lower is better)
Translates to: ASPENDCTDSEKSKVIAEQPTMD*TSPKEK
Trigger: TTTCTCCTTGGGTGATGTGCAATCCATCGTAGGCTG...TTCTGCTATGACTTTGGACTTCTCTGAGTCTGTGCAATCATTTTCTGGAGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR CCA 90 bp GCAGTCCGAGAAATCCTCGGCACTGTTGGAGTGACTTCAACTTTAAGGACTTTCAGTTTTTCATGGCATTaGCAACCAATAGTGGTTGAG +
Preference number: 4 (lower is better)
Translates to: AVREILGTVGVTSTLRTFSFSWH*QPIVVE
Trigger: CTCAACCACTATTGGTTGCCAATGCCATGAAAAACT...GAAAGTCCTTAAAGTTGAAGTCACTCCAACAGTGCCGAGGATTTCTCGGACTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR CCA 90 bp TCAGCCTACGATGGATTGCACATCACCCAAGGAGAAAGGAAGGCATGGAAAAGGACTTTAAGGACTTTCTaGCCTTCTTGTGTAGAATCA +
Preference number: 4 (lower is better)
Translates to: SAYDGLHITQGERKAWKRTLRTF*PSCVES
Trigger: TGATTCTACACAAGAAGGCCAGAAAGTCCTTAAAGT...CCTTTTCCATGCCTTCCTTTCTCCTTGGGTGATGTGCAATCCATCGTAGGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR CCA 90 bp AGGATGAAGATCACTATAAACAACTCTGATGAGATCATGCTGACACAATGCCCCCTCACAGTGTTGAAATaGGACCGATCAGCCTACGAT +
Preference number: 4 (lower is better)
Translates to: RMKITINNSDEIMLTQCPLTVLK*DRSAYD
Trigger: ATCGTAGGCTGATCGGTCCCATTTCAACACTGTGAG...GGGGCATTGTGTCAGCATGATCTCATCAGAGTTGTTTATAGTGATCTTCATCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR CCA 90 bp TTGATCACACCACAACCTCTGAGCCTCTGTTTCTTGAGGATGAAGGTTGGGGTGCATTTTCACATGAGCTaGAAAAATGTTACAGACCAC +
Preference number: 4 (lower is better)
Translates to: LITPQPLSLCFLRMKVGVHFHMS*KNVTDH
Trigger: GTGGTCTGTAACATTTTTCCAGCTCATGTGAAAATG...CACCCCAACCTTCATCCTCAAGAAACAGAGGCTCAGAGGTTGTGGTGTGATCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000418596.7
CDS-3UTR CCA 90 bp CAAAGCACTGATAGCTCTGATGTATTCTGTGGAAGGATAACTTATAACAGTTTACTCCAGAGGCTGAGGTaGGAAGATCACCTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: QSTDSSDVFCGRITYNSLLQRLR*EDHLSP
Trigger: TGGGCTCAGGTGATCTTCCCACCTCAGCCTCTGGAG...TAAACTGTTATAAGTTATCCTTCCACAGAATACATCAGAGCTATCAGTGCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418596.7
CDS-3UTR TCA 90 bp GCAGTCCGAGAAATCCTCGGCACTGTTGGAGTGACTTCAACTTTAAGGACTTTCAAGAGATTGGTAAGATaGGGCAGGCATATATACAAT +
Preference number: 4 (lower is better)
Translates to: AVREILGTVGVTSTLRTFKRLVR*GRHIYN
Trigger: ATTGTATATATGCCTGCCTCATCTTACCAATCTCTT...GAAAGTCCTTAAAGTTGAAGTCACTCCAACAGTGCCGAGGATTTCTCGGACTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR TCA 90 bp GCTTCTCCAGAAAATGATTGCACAGACTCAGAGAAGTCCAAAGTCATAGCAGAAATGCCCCTCAGATTCTaGTTTGTTAGTTGGCCAAAC +
Preference number: 4 (lower is better)
Translates to: ASPENDCTDSEKSKVIAEMPLRF*FVSWPN
Trigger: GTTTGGCCAACTAACAAATCAGAATCTGAGGGGCAT...TTCTGCTATGACTTTGGACTTCTCTGAGTCTGTGCAATCATTTTCTGGAGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR GCA 90 bp GCTTCTCCAGAAAATGATTGCACAGACTCAGAGAAGTCCAAAGTCATAGCAGAATTCAAACCGGTTCTGTaGAGTGAATGTTTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: ASPENDCTDSEKSKVIAEFKPVL*SECFPL
Trigger: CAGAGGGAAACATTCACTGCACAGAACCGGTTTGAA...TTCTGCTATGACTTTGGACTTCTCTGAGTCTGTGCAATCATTTTCTGGAGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR GCA 90 bp GCAGTCCGAGAAATCCTCGGCACTGTTGGAGTGACTTCAACTTTAAGGACTTTCTGGTACTTGCTTGACTaGCATTTACATAGTCAAATG +
Preference number: 4 (lower is better)
Translates to: AVREILGTVGVTSTLRTFWYLLD*HLHSQM
Trigger: CATTTGACTATGTAAATGGCAGTCAAGCAAGTACCA...GAAAGTCCTTAAAGTTGAAGTCACTCCAACAGTGCCGAGGATTTCTCGGACTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR GCA 90 bp TTGATCACACCACAACCTCTGAGCCTCTGTTTCTTGAGGATGAAGGTTGGGGTGGATGAAGTGTCTTCTTaGACAATGAAATGTTCAGTT +
Preference number: 4 (lower is better)
Translates to: LITPQPLSLCFLRMKVGVDEVSS*TMKCSV
Trigger: AACTGAACATTTCATTGTGCAAGAAGACACTTCATC...CACCCCAACCTTCATCCTCAAGAAACAGAGGCTCAGAGGTTGTGGTGTGATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418596.7
CDS-3UTR GCA 90 bp GATCCAATTGTTGAAGGTTCATGGTATATTGAAGGCTTGGATAAGGAGGGGATACAGCCTACGATGGATTaGACATCACCCAAGGAGAAA +
Preference number: 4 (lower is better)
Translates to: DPIVEGSWYIEGLDKEGIQPTMD*TSPKEK
Trigger: TTTCTCCTTGGGTGATGTGCAATCCATCGTAGGCTG...TATCCCCTCCTTATCCAAGCCTTCAATATACCATGAACCTTCAACAATTGGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR GCA 90 bp TCAGCCTACGATGGATTGCACATCACCCAAGGAGAAAGGAAGGCATGGAAAAGGATTTTAATGAAAAAGTaGAGCAGTCTACCACCTTTC +
Preference number: 4 (lower is better)
Translates to: SAYDGLHITQGERKAWKRILMKK*SSLPPF
Trigger: GAAAGGTGGTAGACTGCTGCACTTTTTCATTAAAAT...CCTTTTCCATGCCTTCCTTTCTCCTTGGGTGATGTGCAATCCATCGTAGGCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR CCA 90 bp GCTTCTCCAGAAAATGATTGCACAGACTCAGAGAAGTCCAAAGTCATAGCAGAACTGTTTCTTTATCCTTaGCTGAACGCCCAGTTGCTA +
Preference number: 4 (lower is better)
Translates to: ASPENDCTDSEKSKVIAELFLYP*LNAQLL
Trigger: TAGCAACTGGGCGTTCAGCCAAGGATAAAGAAACAG...TTCTGCTATGACTTTGGACTTCTCTGAGTCTGTGCAATCATTTTCTGGAGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR CCA 90 bp GCTTCTCCAGAAAATGATTGCACAGACTCAGAGAAGTCCAAAGTCATAGCAGAACTGCATATTGAAACTTaGGGATCGAGACTGCTTGGT +
Preference number: 4 (lower is better)
Translates to: ASPENDCTDSEKSKVIAELHIET*GSRLLG
Trigger: ACCAAGCAGTCTCGATCCCCAAGTTTCAATATGCAG...TTCTGCTATGACTTTGGACTTCTCTGAGTCTGTGCAATCATTTTCTGGAGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR CCA 90 bp CCTCTGAGGATGAAGATCACTATAAACAACTCTGATGAGATCATGCTGACACAACACTGTTGCCTAGGCTaGAGTACAGTAGTGCATTCT +
Preference number: 4 (lower is better)
Translates to: PLRMKITINNSDEIMLTQHCCLG*STVVHS
Trigger: AGAATGCACTACTGTACTCCAGCCTAGGCAACAGTG...TTGTGTCAGCATGATCTCATCAGAGTTGTTTATAGTGATCTTCATCCTCAGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR CCA 90 bp TCAGCCTACGATGGATTGCACATCACCCAAGGAGAAAGGAAGGCATGGAAAAGGAATGTTGTACTTGTGTaGTCAGGTTCAGAAGAAATA +
Preference number: 4 (lower is better)
Translates to: SAYDGLHITQGERKAWKRNVVLV*SGSEEI
Trigger: TATTTCTTCTGAACCTGACCACACAAGTACAACATT...CCTTTTCCATGCCTTCCTTTCTCCTTGGGTGATGTGCAATCCATCGTAGGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418596.7
CDS-3UTR TCA 90 bp CCTCTGAGGATGAAGATCACTATAAACAACTCTGATGAGATCATGCTGACACAATTCTTTATCCTTGGCTaGACGCCCAGTTGCTACTTT +
Preference number: 4 (lower is better)
Translates to: PLRMKITINNSDEIMLTQFFILG*TPSCYF
Trigger: AAAGTAGCAACTGGGCGTTCAGCCAAGGATAAAGAA...TTGTGTCAGCATGATCTCATCAGAGTTGTTTATAGTGATCTTCATCCTCAGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR TCA 90 bp GCTTCTCCAGAAAATGATTGCACAGACTCAGAGAAGTCCAAAGTCATAGCAGAATGGTGTCAGCTCAACTaGATCTACACTAAGATCAGT +
Preference number: 4 (lower is better)
Translates to: ASPENDCTDSEKSKVIAEWCQLN*IYTKIS
Trigger: ACTGATCTTAGTGTAGATTCAGTTGAGCTGACACCA...TTCTGCTATGACTTTGGACTTCTCTGAGTCTGTGCAATCATTTTCTGGAGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR TCA 90 bp GCTTCTCCAGAAAATGATTGCACAGACTCAGAGAAGTCCAAAGTCATAGCAGAATGCTTCTCCAGAAAATaGTTGCACAGACTCAGAGAA +
Preference number: 4 (lower is better)
Translates to: ASPENDCTDSEKSKVIAECFSRK*LHRLRE
Trigger: TTCTCTGAGTCTGTGCAATCATTTTCTGGAGAAGCA...TTCTGCTATGACTTTGGACTTCTCTGAGTCTGTGCAATCATTTTCTGGAGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR TCA 90 bp CCTCTGAGGATGAAGATCACTATAAACAACTCTGATGAGATCATGCTGACACAAATTTATGCCATAAAGTaGCTGACCTCCAGCCATAGC +
Preference number: 4 (lower is better)
Translates to: PLRMKITINNSDEIMLTQIYAIK*LTSSHS
Trigger: GCTATGGCTGGAGGTCAGTCACTTTATGGCATAAAT...TTGTGTCAGCATGATCTCATCAGAGTTGTTTATAGTGATCTTCATCCTCAGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR GCA 90 bp CCTCTGAGGATGAAGATCACTATAAACAACTCTGATGAGATCATGCTGACACAAATCATGCTGACACAATaGCCCTTCTGTCAAAGCCAT +
Preference number: 4 (lower is better)
Translates to: PLRMKITINNSDEIMLTQIMLTQ*PFCQSH
Trigger: ATGGCTTTGACAGAAGGGGCATTGTGTCAGCATGAT...TTGTGTCAGCATGATCTCATCAGAGTTGTTTATAGTGATCTTCATCCTCAGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR GCA 90 bp GATCCAATTGTTGAAGGTTCATGGTATATTGAAGGCTTGGATAAGGAGGGGATATTCAAACCGGTTCTGTaGAGTGAATGTTTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: DPIVEGSWYIEGLDKEGIFKPVL*SECFPL
Trigger: CAGAGGGAAACATTCACTGCACAGAACCGGTTTGAA...TATCCCCTCCTTATCCAAGCCTTCAATATACCATGAACCTTCAACAATTGGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR GCA 90 bp GATCCAATTGTTGAAGGTTCATGGTATATTGAAGGCTTGGATAAGGAGGGGATAACCCCTGTGAGAAGTTaGACCATAAATTCAGGATCC +
Preference number: 4 (lower is better)
Translates to: DPIVEGSWYIEGLDKEGITPVRS*TINSGS
Trigger: GGATCCTGAATTTATGGTGCAACTTCTCACAGGGGT...TATCCCCTCCTTATCCAAGCCTTCAATATACCATGAACCTTCAACAATTGGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR GCA 90 bp AGGATGAAGATCACTATAAACAACTCTGATGAGATCATGCTGACACAATGCCCCCTAAGATCAGTTGGTTaGTGTACATACTGCTTGCGA +
Preference number: 4 (lower is better)
Translates to: RMKITINNSDEIMLTQCPLRSVG*CTYCLR
Trigger: TCGCAAGCAGTATGTACAGCAACCAACTGATCTTAG...GGGGCATTGTGTCAGCATGATCTCATCAGAGTTGTTTATAGTGATCTTCATCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR GCA 90 bp GCTTCTCCAGAAAATGATTGCACAGACTCAGAGAAGTCCAAAGTCATAGCAGAACTAAGATCAGTTGGTTaGTGTACATACTGCTTGCGA +
Preference number: 4 (lower is better)
Translates to: ASPENDCTDSEKSKVIAELRSVG*CTYCLR
Trigger: TCGCAAGCAGTATGTACAGCAACCAACTGATCTTAG...TTCTGCTATGACTTTGGACTTCTCTGAGTCTGTGCAATCATTTTCTGGAGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR GCA 90 bp ATTGTCTACTTATCAACTTTTAGCTTTACCCTGGACTTTGGCAATGTTGTAGATCAGTGCCAACCCCAATaGTGGTACTTGCTTGACTGC +
Preference number: 4 (lower is better)
Translates to: IVYLSTFSFTLDFGNVVDQCQPQ*WYLLDC
Trigger: GCAGTCAAGCAAGTACCAGCATTGGGGTTGGCACTG...ATCTACAACATTGCCAAAGTCCAGGGTAAAGCTAAAAGTTGATAAGTAGACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR GCA 90 bp GCTTCTCCAGAAAATGATTGCACAGACTCAGAGAAGTCCAAAGTCATAGCAGAACTGGGAAATAGAACATaGCCCTCAGATTCTGATTTG +
Preference number: 4 (lower is better)
Translates to: ASPENDCTDSEKSKVIAELGNRT*PSDSDL
Trigger: CAAATCAGAATCTGAGGGGCATGTTCTATTTCCCAG...TTCTGCTATGACTTTGGACTTCTCTGAGTCTGTGCAATCATTTTCTGGAGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR CCA 90 bp AGGATGAAGATCACTATAAACAACTCTGATGAGATCATGCTGACACAATGCCCCAACCCACATCAATTCTaGCAAGAACTGCAGTGTGAA +
Preference number: 4 (lower is better)
Translates to: RMKITINNSDEIMLTQCPNPHQF*QELQCE
Trigger: TTCACACTGCAGTTCTTGCCAGAATTGATGTGGGTT...GGGGCATTGTGTCAGCATGATCTCATCAGAGTTGTTTATAGTGATCTTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR CCA 90 bp GCTTCTCCAGAAAATGATTGCACAGACTCAGAGAAGTCCAAAGTCATAGCAGAATTTTTCATGTTGCCGTaGAAAGCCACTCACACAAAC +
Preference number: 4 (lower is better)
Translates to: ASPENDCTDSEKSKVIAEFFMLP*KATHTN
Trigger: GTTTGTGTGAGTGGCTTTCCACGGCAACATGAAAAA...TTCTGCTATGACTTTGGACTTCTCTGAGTCTGTGCAATCATTTTCTGGAGAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR CCA 90 bp GCTTCTCCAGAAAATGATTGCACAGACTCAGAGAAGTCCAAAGTCATAGCAGAAAATCCTCGGCACTGTTaGAGTGACTTCAACTTTAAG +
Preference number: 4 (lower is better)
Translates to: ASPENDCTDSEKSKVIAENPRHC*SDFNFK
Trigger: CTTAAAGTTGAAGTCACTCCAACAGTGCCGAGGATT...TTCTGCTATGACTTTGGACTTCTCTGAGTCTGTGCAATCATTTTCTGGAGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR CCA 90 bp CAAAGCACTGATAGCTCTGATGTATTCTGTGGAAGGATAACTTATAACAGTTTACCGATCAGCCTACGATaGATTGCACATCACCCAAGG +
Preference number: 4 (lower is better)
Translates to: QSTDSSDVFCGRITYNSLPISLR*IAHHPR
Trigger: CCTTGGGTGATGTGCAATCCATCGTAGGCTGATCGG...TAAACTGTTATAAGTTATCCTTCCACAGAATACATCAGAGCTATCAGTGCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
3UTR CAA 72 bp TTGCTTGACTGCCATTTACATAGTCAAATGATTTACTaGAGGAAGCACTGGCTGTCCGGATTAGACTTAAGC +
Preference number: 4 (lower is better)
Translates to: LLDCHLHSQMIY*RKHWLSGLDLS
Trigger: GCTTAAGTCTAATCCGGACAGCCAGTGCTTCCTCAAGTAAATCATTTGACTATGTAAATGGCAGTCAAGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR TCA 90 bp CAATGCTGGTACTTGCTTGACTGCCATTTACATAGTCAAATGATTTACTTGAGGCTTAAGTCGAACCTCTaGGCTACGATAGAGCTCAAA +
Preference number: 4 (lower is better)
Translates to: QCWYLLDCHLHSQMIYLRLKSNL*ATIELK
Trigger: TTTGAGCTCTATCGTAGCTCAGAGGTTCGACTTAAG...CCTCAAGTAAATCATTTGACTATGTAAATGGCAGTCAAGCAAGTACCAGCATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR TCA 90 bp ATTGTCTACTTATCAACTTTTAGCTTTACCCTGGACTTTGGCAATGTTGTAGATCTGATGAGATCATGCTaGCACAATGCCCCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: IVYLSTFSFTLDFGNVVDLMRSC*HNAPSV
Trigger: GACAGAAGGGGCATTGTGTCAGCATGATCTCATCAG...ATCTACAACATTGCCAAAGTCCAGGGTAAAGCTAAAAGTTGATAAGTAGACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR TCA 90 bp GCTTCTCCAGAAAATGATTGCACAGACTCAGAGAAGTCCAAAGTCATAGCAGAAATATTAGCTGCATATTaGAACTTGGGGATCGAGACT +
Preference number: 4 (lower is better)
Translates to: ASPENDCTDSEKSKVIAEILAAY*NLGIET
Trigger: AGTCTCGATCCCCAAGTTTCAATATGCAGCTAATAT...TTCTGCTATGACTTTGGACTTCTCTGAGTCTGTGCAATCATTTTCTGGAGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR TCA 90 bp GCTTCTCCAGAAAATGATTGCACAGACTCAGAGAAGTCCAAAGTCATAGCAGAATTTCACAATGTGGGATaGAGTGTCTTCTTGCACAAT +
Preference number: 4 (lower is better)
Translates to: ASPENDCTDSEKSKVIAEFHNVG*SVFLHN
Trigger: ATTGTGCAAGAAGACACTTCATCCCACATTGTGAAA...TTCTGCTATGACTTTGGACTTCTCTGAGTCTGTGCAATCATTTTCTGGAGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR TCA 90 bp GCTTCTCCAGAAAATGATTGCACAGACTCAGAGAAGTCCAAAGTCATAGCAGAATTTACAAGGGATAGGTaGAGAGAAGATGTAGGAAAG +
Preference number: 4 (lower is better)
Translates to: ASPENDCTDSEKSKVIAEFTRDR*REDVGK
Trigger: CTTTCCTACATCTTCTCTTCACCTATCCCTTGTAAA...TTCTGCTATGACTTTGGACTTCTCTGAGTCTGTGCAATCATTTTCTGGAGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR GCA 90 bp GCTTCTCCAGAAAATGATTGCACAGACTCAGAGAAGTCCAAAGTCATAGCAGAAACAGAAGTGCTTCAATaGAACCATTACTCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: ASPENDCTDSEKSKVIAETEVLQ*NHYSVC
Trigger: ACAGACAGAGTAATGGTTGCATTGAAGCACTTCTGT...TTCTGCTATGACTTTGGACTTCTCTGAGTCTGTGCAATCATTTTCTGGAGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR GCA 90 bp ATTGTCTACTTATCAACTTTTAGCTTTACCCTGGACTTTGGCAATGTTGTAGATCCTAGCCGGTCTTCCTaGAGACTGACAGTTGAGTAT +
Preference number: 4 (lower is better)
Translates to: IVYLSTFSFTLDFGNVVDPSRSS*RLTVEY
Trigger: ATACTCAACTGTCAGTCTGCAGGAAGACCGGCTAGG...ATCTACAACATTGCCAAAGTCCAGGGTAAAGCTAAAAGTTGATAAGTAGACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR GCA 90 bp AGGATGAAGATCACTATAAACAACTCTGATGAGATCATGCTGACACAATGCCCCACCTGGGATATTAGCTaGATATTGAAACTTGGGGAT +
Preference number: 4 (lower is better)
Translates to: RMKITINNSDEIMLTQCPTWDIS*ILKLGD
Trigger: ATCCCCAAGTTTCAATATGCAGCTAATATCCCAGGT...GGGGCATTGTGTCAGCATGATCTCATCAGAGTTGTTTATAGTGATCTTCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR CCA 90 bp CCTCTGAGGATGAAGATCACTATAAACAACTCTGATGAGATCATGCTGACACAAAATCCTCGGCACTGTTaGAGTGACTTCAACTTTAAG +
Preference number: 4 (lower is better)
Translates to: PLRMKITINNSDEIMLTQNPRHC*SDFNFK
Trigger: CTTAAAGTTGAAGTCACTCCAACAGTGCCGAGGATT...TTGTGTCAGCATGATCTCATCAGAGTTGTTTATAGTGATCTTCATCCTCAGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR CCA 90 bp CAAAGCACTGATAGCTCTGATGTATTCTGTGGAAGGATAACTTATAACAGTTTATGCCAACCCCAATGCTaGTACTTGCTTGACTGCCAT +
Preference number: 4 (lower is better)
Translates to: QSTDSSDVFCGRITYNSLCQPQC*YLLDCH
Trigger: ATGGCAGTCAAGCAAGTACCAGCATTGGGGTTGGCA...TAAACTGTTATAAGTTATCCTTCCACAGAATACATCAGAGCTATCAGTGCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR CCA 90 bp CAAAGCACTGATAGCTCTGATGTATTCTGTGGAAGGATAACTTATAACAGTTTAACAGTAGTGCATTCTTaGCTCACTGCAACCTCCACC +
Preference number: 4 (lower is better)
Translates to: QSTDSSDVFCGRITYNSLTVVHS*LTATST
Trigger: GGTGGAGGTTGCAGTGAGCCAAGAATGCACTACTGT...TAAACTGTTATAAGTTATCCTTCCACAGAATACATCAGAGCTATCAGTGCTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR CCA 90 bp GCTTCTCCAGAAAATGATTGCACAGACTCAGAGAAGTCCAAAGTCATAGCAGAACTGGTGACTGAAAGCTaGCTGACTCAAAAATTACTT +
Preference number: 4 (lower is better)
Translates to: ASPENDCTDSEKSKVIAELVTES*LTQKLL
Trigger: AAGTAATTTTTGAGTCAGCCAGCTTTCAGTCACCAG...TTCTGCTATGACTTTGGACTTCTCTGAGTCTGTGCAATCATTTTCTGGAGAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418596.7
CDS-3UTR TCA 90 bp GCTTCTCCAGAAAATGATTGCACAGACTCAGAGAAGTCCAAAGTCATAGCAGAATGTCAGGTAATGCCTTaGATTCTGATAACCATTCTT +
Preference number: 4 (lower is better)
Translates to: ASPENDCTDSEKSKVIAECQVMP*ILITIL
Trigger: AAGAATGGTTATCAGAATTCAAGGCATTACCTGACA...TTCTGCTATGACTTTGGACTTCTCTGAGTCTGTGCAATCATTTTCTGGAGAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR TCA 90 bp CAATGCTGGTACTTGCTTGACTGCCATTTACATAGTCAAATGATTTACTTGAGGTCTATGACGACGGATTaGAGCTGTTGTAATTGCAGT +
Preference number: 4 (lower is better)
Translates to: QCWYLLDCHLHSQMIYLRSMTTD*SCCNCS
Trigger: ACTGCAATTACAACAGCTTCAATCCGTCGTCATAGA...CCTCAAGTAAATCATTTGACTATGTAAATGGCAGTCAAGCAAGTACCAGCATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR TCA 90 bp CAATGCTGGTACTTGCTTGACTGCCATTTACATAGTCAAATGATTTACTTGAGGCTGCAGACTGACAGTTaGGTATCGATTAGCATTGTT +
Preference number: 4 (lower is better)
Translates to: QCWYLLDCHLHSQMIYLRLQTDS*VSISIV
Trigger: AACAATGCTAATCGATACTCAACTGTCAGTCTGCAG...CCTCAAGTAAATCATTTGACTATGTAAATGGCAGTCAAGCAAGTACCAGCATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR CCA 90 bp GCTTCTCCAGAAAATGATTGCACAGACTCAGAGAAGTCCAAAGTCATAGCAGAAGTAATGAGTTTTTCATaGCATTGGCAACCAATAGTG +
Preference number: 4 (lower is better)
Translates to: ASPENDCTDSEKSKVIAEVMSFS*HWQPIV
Trigger: CACTATTGGTTGCCAATGCCATGAAAAACTCATTAC...TTCTGCTATGACTTTGGACTTCTCTGAGTCTGTGCAATCATTTTCTGGAGAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR CCA 90 bp GCTTCTCCAGAAAATGATTGCACAGACTCAGAGAAGTCCAAAGTCATAGCAGAATGTCAAAACTACACCTaGGATATTAGCTGCATATTG +
Preference number: 4 (lower is better)
Translates to: ASPENDCTDSEKSKVIAECQNYT*DISCIL
Trigger: CAATATGCAGCTAATATCCCAGGTGTAGTTTTGACA...TTCTGCTATGACTTTGGACTTCTCTGAGTCTGTGCAATCATTTTCTGGAGAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR CCA 90 bp CAAAGCACTGATAGCTCTGATGTATTCTGTGGAAGGATAACTTATAACAGTTTACTCACAGTGTTGAAATaGGACCGATCAGCCTACGAT +
Preference number: 4 (lower is better)
Translates to: QSTDSSDVFCGRITYNSLLTVLK*DRSAYD
Trigger: ATCGTAGGCTGATCGGTCCCATTTCAACACTGTGAG...TAAACTGTTATAAGTTATCCTTCCACAGAATACATCAGAGCTATCAGTGCTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR CCA 90 bp CAATGCTGGTACTTGCTTGACTGCCATTTACATAGTCAAATGATTTACTTGAGGGCCCTCCAATGGAGGTaGTCACAACTTGATTTAAAT +
Preference number: 4 (lower is better)
Translates to: QCWYLLDCHLHSQMIYLRALQWR*SQLDLN
Trigger: ATTTAAATCAAGTTGTGACCACCTCCATTGGAGGGC...CCTCAAGTAAATCATTTGACTATGTAAATGGCAGTCAAGCAAGTACCAGCATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR CCA 90 bp CAAAGCACTGATAGCTCTGATGTATTCTGTGGAAGGATAACTTATAACAGTTTACCTTATATGTCCTTGTaGGGAAGAGGGAAGACACGT +
Preference number: 4 (lower is better)
Translates to: QSTDSSDVFCGRITYNSLPYMSL*GRGKTR
Trigger: ACGTGTCTTCCCTCTTCCCCACAAGGACATATAAGG...TAAACTGTTATAAGTTATCCTTCCACAGAATACATCAGAGCTATCAGTGCTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR CCA 90 bp CAAAGCACTGATAGCTCTGATGTATTCTGTGGAAGGATAACTTATAACAGTTTACACTGTTGCCTAGGCTaGAGTACAGTAGTGCATTCT +
Preference number: 4 (lower is better)
Translates to: QSTDSSDVFCGRITYNSLHCCLG*STVVHS
Trigger: AGAATGCACTACTGTACTCCAGCCTAGGCAACAGTG...TAAACTGTTATAAGTTATCCTTCCACAGAATACATCAGAGCTATCAGTGCTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR CCA 90 bp GCTTCTCCAGAAAATGATTGCACAGACTCAGAGAAGTCCAAAGTCATAGCAGAAGTCACTGTTCCATTATaGAATCATAAGCTTCACACT +
Preference number: 4 (lower is better)
Translates to: ASPENDCTDSEKSKVIAEVTVPL*NHKLHT
Trigger: AGTGTGAAGCTTATGATTCCATAATGGAACAGTGAC...TTCTGCTATGACTTTGGACTTCTCTGAGTCTGTGCAATCATTTTCTGGAGAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418596.7
CDS-3UTR TCA 90 bp GATCCAATTGTTGAAGGTTCATGGTATATTGAAGGCTTGGATAAGGAGGGGATATGTCAGGTAATGCCTTaGATTCTGATAACCATTCTT +
Preference number: 4 (lower is better)
Translates to: DPIVEGSWYIEGLDKEGICQVMP*ILITIL
Trigger: AAGAATGGTTATCAGAATTCAAGGCATTACCTGACA...TATCCCCTCCTTATCCAAGCCTTCAATATACCATGAACCTTCAACAATTGGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR TCA 90 bp CAAAGCACTGATAGCTCTGATGTATTCTGTGGAAGGATAACTTATAACAGTTTATTGCTGCATAACTGGTaGTCTGAGTGTCAGGTAATG +
Preference number: 4 (lower is better)
Translates to: QSTDSSDVFCGRITYNSLLLHNW*SECQVM
Trigger: CATTACCTGACACTCAGATCACCAGTTATGCAGCAA...TAAACTGTTATAAGTTATCCTTCCACAGAATACATCAGAGCTATCAGTGCTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR TCA 90 bp CAAAGCACTGATAGCTCTGATGTATTCTGTGGAAGGATAACTTATAACAGTTTATTCTTTATCCTTGGCTaGACGCCCAGTTGCTACTTT +
Preference number: 4 (lower is better)
Translates to: QSTDSSDVFCGRITYNSLFFILG*TPSCYF
Trigger: AAAGTAGCAACTGGGCGTTCAGCCAAGGATAAAGAA...TAAACTGTTATAAGTTATCCTTCCACAGAATACATCAGAGCTATCAGTGCTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR GCA 90 bp ATTGTCTACTTATCAACTTTTAGCTTTACCCTGGACTTTGGCAATGTTGTAGATCAGTGTTTTTCATGTTaGCGTGGAAAGCCACTCACA +
Preference number: 4 (lower is better)
Translates to: IVYLSTFSFTLDFGNVVDQCFSC*RGKPLT
Trigger: TGTGAGTGGCTTTCCACGGCAACATGAAAAACACTG...ATCTACAACATTGCCAAAGTCCAGGGTAAAGCTAAAAGTTGATAAGTAGACAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR GCA 90 bp AGGATGAAGATCACTATAAACAACTCTGATGAGATCATGCTGACACAATGCCCCGATGAAGTGTCTTCTTaGACAATGAAATGTTCAGTT +
Preference number: 4 (lower is better)
Translates to: RMKITINNSDEIMLTQCPDEVSS*TMKCSV
Trigger: AACTGAACATTTCATTGTGCAAGAAGACACTTCATC...GGGGCATTGTGTCAGCATGATCTCATCAGAGTTGTTTATAGTGATCTTCATCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR GCA 90 bp AGGATGAAGATCACTATAAACAACTCTGATGAGATCATGCTGACACAATGCCCCGTGGTATTTCTTTTGTaGTCTAACCAAAATCATGCT +
Preference number: 4 (lower is better)
Translates to: RMKITINNSDEIMLTQCPVVFLL*SNQNHA
Trigger: AGCATGATTTTGGTTAGAGCACAAAAGAAATACCAC...GGGGCATTGTGTCAGCATGATCTCATCAGAGTTGTTTATAGTGATCTTCATCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR GCA 90 bp GCTTCTCCAGAAAATGATTGCACAGACTCAGAGAAGTCCAAAGTCATAGCAGAAGTGGTATTTCTTTTGTaGTCTAACCAAAATCATGCT +
Preference number: 4 (lower is better)
Translates to: ASPENDCTDSEKSKVIAEVVFLL*SNQNHA
Trigger: AGCATGATTTTGGTTAGAGCACAAAAGAAATACCAC...TTCTGCTATGACTTTGGACTTCTCTGAGTCTGTGCAATCATTTTCTGGAGAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR GCA 90 bp CAAAGCACTGATAGCTCTGATGTATTCTGTGGAAGGATAACTTATAACAGTTTAGGTTCAGAAGAAATATaGCTACACAGGCAAGGAGGT +
Preference number: 4 (lower is better)
Translates to: QSTDSSDVFCGRITYNSLGSEEI*LHRQGG
Trigger: ACCTCCTTGCCTGTGTAGGCATATTTCTTCTGAACC...TAAACTGTTATAAGTTATCCTTCCACAGAATACATCAGAGCTATCAGTGCTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418596.7
CDS-3UTR CCA 90 bp AGGATGAAGATCACTATAAACAACTCTGATGAGATCATGCTGACACAATGCCCCATTGTTGAAGGTTCATaGTATATTGAAGGCTTGGAT +
Preference number: 4 (lower is better)
Translates to: RMKITINNSDEIMLTQCPIVEGS*YIEGLD
Trigger: ATCCAAGCCTTCAATATACCATGAACCTTCAACAAT...GGGGCATTGTGTCAGCATGATCTCATCAGAGTTGTTTATAGTGATCTTCATCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR CCA 90 bp GCTTCTCCAGAAAATGATTGCACAGACTCAGAGAAGTCCAAAGTCATAGCAGAAATTGTTGAAGGTTCATaGTATATTGAAGGCTTGGAT +
Preference number: 4 (lower is better)
Translates to: ASPENDCTDSEKSKVIAEIVEGS*YIEGLD
Trigger: ATCCAAGCCTTCAATATACCATGAACCTTCAACAAT...TTCTGCTATGACTTTGGACTTCTCTGAGTCTGTGCAATCATTTTCTGGAGAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR CCA 90 bp CAAAGCACTGATAGCTCTGATGTATTCTGTGGAAGGATAACTTATAACAGTTTACTGTTTCTTTATCCTTaGCTGAACGCCCAGTTGCTA +
Preference number: 4 (lower is better)
Translates to: QSTDSSDVFCGRITYNSLLFLYP*LNAQLL
Trigger: TAGCAACTGGGCGTTCAGCCAAGGATAAAGAAACAG...TAAACTGTTATAAGTTATCCTTCCACAGAATACATCAGAGCTATCAGTGCTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR TCA 90 bp ATTGTCTACTTATCAACTTTTAGCTTTACCCTGGACTTTGGCAATGTTGTAGATTCTATGACGACGGATTaGAGCTGTTGTAATTGCAGT +
Preference number: 4 (lower is better)
Translates to: IVYLSTFSFTLDFGNVVDSMTTD*SCCNCS
Trigger: ACTGCAATTACAACAGCTTCAATCCGTCGTCATAGA...ATCTACAACATTGCCAAAGTCCAGGGTAAAGCTAAAAGTTGATAAGTAGACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR TCA 90 bp ATTGTCTACTTATCAACTTTTAGCTTTACCCTGGACTTTGGCAATGTTGTAGATCTGCAGACTGACAGTTaGGTATCGATTAGCATTGTT +
Preference number: 4 (lower is better)
Translates to: IVYLSTFSFTLDFGNVVDLQTDS*VSISIV
Trigger: AACAATGCTAATCGATACTCAACTGTCAGTCTGCAG...ATCTACAACATTGCCAAAGTCCAGGGTAAAGCTAAAAGTTGATAAGTAGACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR TCA 90 bp ATTGTCTACTTATCAACTTTTAGCTTTACCCTGGACTTTGGCAATGTTGTAGATTGCTTCTCCAGAAAATaGTTGCACAGACTCAGAGAA +
Preference number: 4 (lower is better)
Translates to: IVYLSTFSFTLDFGNVVDCFSRK*LHRLRE
Trigger: TTCTCTGAGTCTGTGCAATCATTTTCTGGAGAAGCA...ATCTACAACATTGCCAAAGTCCAGGGTAAAGCTAAAAGTTGATAAGTAGACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR GCA 90 bp CAAAGCACTGATAGCTCTGATGTATTCTGTGGAAGGATAACTTATAACAGTTTACCCAATGCTGGTACTTaGTTGACTGCCATTTACATA +
Preference number: 4 (lower is better)
Translates to: QSTDSSDVFCGRITYNSLPNAGT*LTAIYI
Trigger: TATGTAAATGGCAGTCAAGCAAGTACCAGCATTGGG...TAAACTGTTATAAGTTATCCTTCCACAGAATACATCAGAGCTATCAGTGCTTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR CCA 90 bp CAAAGCACTGATAGCTCTGATGTATTCTGTGGAAGGATAACTTATAACAGTTTAAACCCACATCAATTCTaGCAAGAACTGCAGTGTGAA +
Preference number: 4 (lower is better)
Translates to: QSTDSSDVFCGRITYNSLNPHQF*QELQCE
Trigger: TTCACACTGCAGTTCTTGCCAGAATTGATGTGGGTT...TAAACTGTTATAAGTTATCCTTCCACAGAATACATCAGAGCTATCAGTGCTTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR CCA 90 bp CAAAGCACTGATAGCTCTGATGTATTCTGTGGAAGGATAACTTATAACAGTTTAGCCCTCCAATGGAGGTaGTCACAACTTGATTTAAAT +
Preference number: 4 (lower is better)
Translates to: QSTDSSDVFCGRITYNSLALQWR*SQLDLN
Trigger: ATTTAAATCAAGTTGTGACCACCTCCATTGGAGGGC...TAAACTGTTATAAGTTATCCTTCCACAGAATACATCAGAGCTATCAGTGCTTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR TCA 90 bp CAAAGCACTGATAGCTCTGATGTATTCTGTGGAAGGATAACTTATAACAGTTTAGCTGGGCTCTATAAATaGTATCATCAAGAACTTCCT +
Preference number: 4 (lower is better)
Translates to: QSTDSSDVFCGRITYNSLAGLYK*YHQELP
Trigger: AGGAAGTTCTTGATGATATCATTTATAGAGCCCAGC...TAAACTGTTATAAGTTATCCTTCCACAGAATACATCAGAGCTATCAGTGCTTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR TCA 90 bp ATTGTCTACTTATCAACTTTTAGCTTTACCCTGGACTTTGGCAATGTTGTAGATATATTAGCTGCATATTaGAACTTGGGGATCGAGACT +
Preference number: 4 (lower is better)
Translates to: IVYLSTFSFTLDFGNVVDILAAY*NLGIET
Trigger: AGTCTCGATCCCCAAGTTTCAATATGCAGCTAATAT...ATCTACAACATTGCCAAAGTCCAGGGTAAAGCTAAAAGTTGATAAGTAGACAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR TCA 90 bp CAAAGCACTGATAGCTCTGATGTATTCTGTGGAAGGATAACTTATAACAGTTTATTTACAAGGGATAGGTaGAGAGAAGATGTAGGAAAG +
Preference number: 4 (lower is better)
Translates to: QSTDSSDVFCGRITYNSLFTRDR*REDVGK
Trigger: CTTTCCTACATCTTCTCTTCACCTATCCCTTGTAAA...TAAACTGTTATAAGTTATCCTTCCACAGAATACATCAGAGCTATCAGTGCTTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR TCA 90 bp ATTGTCTACTTATCAACTTTTAGCTTTACCCTGGACTTTGGCAATGTTGTAGATATCCCTCTCTTTACCTaGAGATGTACTGTTACACTT +
Preference number: 4 (lower is better)
Translates to: IVYLSTFSFTLDFGNVVDIPLFT*RCTVTL
Trigger: AAGTGTAACAGTACATCTTCAGGTAAAGAGAGGGAT...ATCTACAACATTGCCAAAGTCCAGGGTAAAGCTAAAAGTTGATAAGTAGACAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR TCA 90 bp ATTGTCTACTTATCAACTTTTAGCTTTACCCTGGACTTTGGCAATGTTGTAGATGAAATGTTTCTTCACTaGGGTCAATTCACATCACCT +
Preference number: 4 (lower is better)
Translates to: IVYLSTFSFTLDFGNVVDEMFLH*GQFTSP
Trigger: AGGTGATGTGAATTGACCTCAGTGAAGAAACATTTC...ATCTACAACATTGCCAAAGTCCAGGGTAAAGCTAAAAGTTGATAAGTAGACAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418596.7
CDS-3UTR TCA 90 bp CAAAGCACTGATAGCTCTGATGTATTCTGTGGAAGGATAACTTATAACAGTTTAACAGACTGGAAATACTaGGCTTATATAGCTGAGACT +
Preference number: 4 (lower is better)
Translates to: QSTDSSDVFCGRITYNSLTDWKY*AYIAET
Trigger: AGTCTCAGCTATATAAGCTCAGTATTTCCAGTCTGT...TAAACTGTTATAAGTTATCCTTCCACAGAATACATCAGAGCTATCAGTGCTTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418596.7
CDS-3UTR GCA 90 bp ATTGTCTACTTATCAACTTTTAGCTTTACCCTGGACTTTGGCAATGTTGTAGATAATTCTGGCAAGAACTaGAGTGTGAACCTCTTAAGT +
Preference number: 4 (lower is better)
Translates to: IVYLSTFSFTLDFGNVVDNSGKN*SVNLLS
Trigger: ACTTAAGAGGTTCACACTGCAGTTCTTGCCAGAATT...ATCTACAACATTGCCAAAGTCCAGGGTAAAGCTAAAAGTTGATAAGTAGACAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR GCA 90 bp CAAAGCACTGATAGCTCTGATGTATTCTGTGGAAGGATAACTTATAACAGTTTAACCTGGGATATTAGCTaGATATTGAAACTTGGGGAT +
Preference number: 4 (lower is better)
Translates to: QSTDSSDVFCGRITYNSLTWDIS*ILKLGD
Trigger: ATCCCCAAGTTTCAATATGCAGCTAATATCCCAGGT...TAAACTGTTATAAGTTATCCTTCCACAGAATACATCAGAGCTATCAGTGCTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR GCA 90 bp CAATGCTGGTACTTGCTTGACTGCCATTTACATAGTCAAATGATTTACTTGAGGATTTTAATGAAAAAGTaGAGCAGTCTACCACCTTTC +
Preference number: 4 (lower is better)
Translates to: QCWYLLDCHLHSQMIYLRILMKK*SSLPPF
Trigger: GAAAGGTGGTAGACTGCTGCACTTTTTCATTAAAAT...CCTCAAGTAAATCATTTGACTATGTAAATGGCAGTCAAGCAAGTACCAGCATTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR CCA 90 bp ATTGTCTACTTATCAACTTTTAGCTTTACCCTGGACTTTGGCAATGTTGTAGATAGTTTTTCATGGCATTaGCAACCAATAGTGGTTGAG +
Preference number: 4 (lower is better)
Translates to: IVYLSTFSFTLDFGNVVDSFSWH*QPIVVE
Trigger: CTCAACCACTATTGGTTGCCAATGCCATGAAAAACT...ATCTACAACATTGCCAAAGTCCAGGGTAAAGCTAAAAGTTGATAAGTAGACAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR CCA 90 bp ATTGTCTACTTATCAACTTTTAGCTTTACCCTGGACTTTGGCAATGTTGTAGATCCAACTTGGCATACATaGCACCAACCTAATTGTTTT +
Preference number: 4 (lower is better)
Translates to: IVYLSTFSFTLDFGNVVDPTWHT*HQPNCF
Trigger: AAAACAATTAGGTTGGTGCCATGTATGCCAAGTTGG...ATCTACAACATTGCCAAAGTCCAGGGTAAAGCTAAAAGTTGATAAGTAGACAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418596.7
CDS-3UTR TCA 90 bp CAAAGCACTGATAGCTCTGATGTATTCTGTGGAAGGATAACTTATAACAGTTTACTGATTGTCAACAACTaGAGTACTCAAAAATGGACT +
Preference number: 4 (lower is better)
Translates to: QSTDSSDVFCGRITYNSLLIVNN*STQKWT
Trigger: AGTCCATTTTTGAGTACTTCAGTTGTTGACAATCAG...TAAACTGTTATAAGTTATCCTTCCACAGAATACATCAGAGCTATCAGTGCTTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418596.7
CDS-3UTR TCA 90 bp CAAAGCACTGATAGCTCTGATGTATTCTGTGGAAGGATAACTTATAACAGTTTATTCTGTAATTGGGGATaGGTTGTCCAATTAAGTTCA +
Preference number: 4 (lower is better)
Translates to: QSTDSSDVFCGRITYNSLFCNWG*VVQLSS
Trigger: TGAACTTAATTGGACAACTCATCCCCAATTACAGAA...TAAACTGTTATAAGTTATCCTTCCACAGAATACATCAGAGCTATCAGTGCTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418596.7
CDS-3UTR GCA 90 bp ATTGTCTACTTATCAACTTTTAGCTTTACCCTGGACTTTGGCAATGTTGTAGATTGGTACTTGCTTGACTaGCATTTACATAGTCAAATG +
Preference number: 4 (lower is better)
Translates to: IVYLSTFSFTLDFGNVVDWYLLD*HLHSQM
Trigger: CATTTGACTATGTAAATGGCAGTCAAGCAAGTACCA...ATCTACAACATTGCCAAAGTCCAGGGTAAAGCTAAAAGTTGATAAGTAGACAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS TCA 90 bp GCCCAGGCGGGAGGATCCCTTGAGCCAAGAAGGCTGAGGGCACAGTaGGCTATGATTGAGCCACTGTACTCCAGCCTAGGCGACAGAGAG +
Preference number: 5 (lower is better)
Translates to: AQAGGSLEPRRLRAQ*AMIEPLYSSLGDRE
Trigger: CTCTCTGTCGCCTAGGCTGGAGTACAGTGGCTCAATCATAGCTCACTGTGCCCTCAGCCTTCTTGGCTCAAGGGATCCTCCCGCCTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490725.5
ENST00000498780.5
CDS-3UTR CAA 90 bp CACCCTCAGCACCCTCTGTTGTGGCTGTTGCTGAGTTGGGCTCCGGCGAGCCATCTCAGTCTCACAGTGTaGAAATGGGACCGATCAGCC +
Preference number: 5 (lower is better)
Translates to: HPQHPLLWLLLSWAPASHLSLTV*KWDRSA
Trigger: GGCTGATCGGTCCCATTTCAACACTGTGAGACTGAG...ATGGCTCGCCGGAGCCCAACTCAGCAACAGCCACAACAGAGGGTGCTGAGGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR CAA 90 bp CACCCTCAGCACCCTCTGTTGTGGCTGTTGCTGAGTTGGGCTCCGGCGAGCCATGACTTTCTGGCCTTCTaGTGTAGAATCAGGAGCATC +
Preference number: 5 (lower is better)
Translates to: HPQHPLLWLLLSWAPASHDFLAF*CRIRSI
Trigger: GATGCTCCTGATTCTACACAAGAAGGCCAGAAAGTC...ATGGCTCGCCGGAGCCCAACTCAGCAACAGCCACAACAGAGGGTGCTGAGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR CAA 90 bp ATCCCTAGGTCAGTGGAGCCGTGTTGGATCGGGGAGCCAGGAATACTCGAGTCACCCTCTTGCACACGTTaGATCCCTAGGTCAGTGGAG +
Preference number: 5 (lower is better)
Translates to: IPRSVEPCWIGEPGILESPSCTR*IPRSVE
Trigger: CTCCACTGACCTAGGGATCAAACGTGTGCAAGAGGG...TGACTCGAGTATTCCTGGCTCCCCGATCCAACACGGCTCCACTGACCTAGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR CAA 90 bp TCAGCCTACGATGGATTGCACATCACCCAAGGAGAAAGGAAGGCATGGAAAAGGGTGGCTGTTGCTGAGTaGGGCTCCGGCGAGCCATGC +
Preference number: 5 (lower is better)
Translates to: SAYDGLHITQGERKAWKRVAVAE*GSGEPC
Trigger: GCATGGCTCGCCGGAGCCCAACTCAGCAACAGCCAC...CCTTTTCCATGCCTTCCTTTCTCCTTGGGTGATGTGCAATCCATCGTAGGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR CAA 90 bp ATCCCTAGGTCAGTGGAGCCGTGTTGGATCGGGGAGCCAGGAATACTCGAGTCAACTAAGATCAGTTGGTaGCTGTACATACTGCTTGCG +
Preference number: 5 (lower is better)
Translates to: IPRSVEPCWIGEPGILESTKISW*LYILLA
Trigger: CGCAAGCAGTATGTACAGCAACCAACTGATCTTAGT...TGACTCGAGTATTCCTGGCTCCCCGATCCAACACGGCTCCACTGACCTAGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR CAA 90 bp GCTTCTCCAGAAAATGATTGCACAGACTCAGAGAAGTCCAAAGTCATAGCAGAAGGGGATCGAGACTGCTaGGTCAAGGGGGCTCCTGGG +
Preference number: 5 (lower is better)
Translates to: ASPENDCTDSEKSKVIAEGDRDC*VKGAPG
Trigger: CCCAGGAGCCCCCTTGACCAAGCAGTCTCGATCCCC...TTCTGCTATGACTTTGGACTTCTCTGAGTCTGTGCAATCATTTTCTGGAGAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS TCA 90 bp CAATTCTGGCAAGAACTGCAGTGTGAACCTCTTAAGTCGAACCTCTaGGCTACGATAGAGCTCAAACAGCTGATGGCAGACAGGCTCCAG +
Preference number: 5 (lower is better)
Translates to: QFWQELQCEPLKSNL*ATIELKQLMADRLQ
Trigger: CTGGAGCCTGTCTGCCATCAGCTGTTTGAGCTCTATCGTAGCTCAGAGGTTCGACTTAAGAGGTTCACACTGCAGTTCTTGCCAGAATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286181.7
ENST00000418596.7
ENST00000452799.5
ENST00000453765.5
ENST00000498780.5
ENST00000681958.1
CDS-3UTR CAA 90 bp GATCCAATTGTTGAAGGTTCATGGTATATTGAAGGCTTGGATAAGGAGGGGATACCTCTGTTGTGGCTGTaGCTGAGTTGGGCTCCGGCG +
Preference number: 5 (lower is better)
Translates to: DPIVEGSWYIEGLDKEGIPLLWL*LSWAPA
Trigger: CGCCGGAGCCCAACTCAGCAACAGCCACAACAGAGG...TATCCCCTCCTTATCCAAGCCTTCAATATACCATGAACCTTCAACAATTGGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR CAA 90 bp TCAGCCTACGATGGATTGCACATCACCCAAGGAGAAAGGAAGGCATGGAAAAGGGCTGTTTCTTTATCCTaGGCTGAACGCCCAGTTGCT +
Preference number: 5 (lower is better)
Translates to: SAYDGLHITQGERKAWKRAVSLS*AERPVA
Trigger: AGCAACTGGGCGTTCAGCCAAGGATAAAGAAACAGC...CCTTTTCCATGCCTTCCTTTCTCCTTGGGTGATGTGCAATCCATCGTAGGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR CAA 90 bp GCAGTCCGAGAAATCCTCGGCACTGTTGGAGTGACTTCAACTTTAAGGACTTTCGGGCTCTCACTGGATTaGATGGCAGAGGCTGTTTCT +
Preference number: 5 (lower is better)
Translates to: AVREILGTVGVTSTLRTFGLSLD*MAEAVS
Trigger: AGAAACAGCCTCTGCCATCAAATCCAGTGAGAGCCC...GAAAGTCCTTAAAGTTGAAGTCACTCCAACAGTGCCGAGGATTTCTCGGACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR CAA 90 bp TTGATCACACCACAACCTCTGAGCCTCTGTTTCTTGAGGATGAAGGTTGGGGTGTCAGCCTACGATGGATaGCACATCACCCAAGGAGAA +
Preference number: 5 (lower is better)
Translates to: LITPQPLSLCFLRMKVGVSAYDG*HITQGE
Trigger: TTCTCCTTGGGTGATGTGCAATCCATCGTAGGCTGA...CACCCCAACCTTCATCCTCAAGAAACAGAGGCTCAGAGGTTGTGGTGTGATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418596.7
CDS TCA 90 bp ATTTACACCCTCAGCACCTTCTCTTCTCCATCTATGACGACGGATTaGAGCTGTTGTAATTGCAGTCCGAGAAATCCTCGGCACTGTTGG +
Preference number: 5 (lower is better)
Translates to: IYTLSTFSSPSMTTD*SCCNCSPRNPRHCW
Trigger: CCAACAGTGCCGAGGATTTCTCGGACTGCAATTACAACAGCTTCAATCCGTCGTCATAGATGGAGAAGAGAAGGTGCTGAGGGTGTAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418596.7
CDS-3UTR CAA 90 bp CCTCTGAGGATGAAGATCACTATAAACAACTCTGATGAGATCATGCTGACACAACCTCAGCACCCTCTGTaGTGGCTGTTGCTGAGTTGG +
Preference number: 5 (lower is better)
Translates to: PLRMKITINNSDEIMLTQPQHPL*WLLLSW
Trigger: CCAACTCAGCAACAGCCACAACAGAGGGTGCTGAGG...TTGTGTCAGCATGATCTCATCAGAGTTGTTTATAGTGATCTTCATCCTCAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR CAA 90 bp TCAGCCTACGATGGATTGCACATCACCCAAGGAGAAAGGAAGGCATGGAAAAGGAGTCAAATGATTTACTaGAGGAAGCACTGGCTGTCC +
Preference number: 5 (lower is better)
Translates to: SAYDGLHITQGERKAWKRSQMIY*RKHWLS
Trigger: GGACAGCCAGTGCTTCCTCAAGTAAATCATTTGACT...CCTTTTCCATGCCTTCCTTTCTCCTTGGGTGATGTGCAATCCATCGTAGGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR CAA 90 bp ATTGTCTACTTATCAACTTTTAGCTTTACCCTGGACTTTGGCAATGTTGTAGATGGGGATCGAGACTGCTaGGTCAAGGGGGCTCCTGGG +
Preference number: 5 (lower is better)
Translates to: IVYLSTFSFTLDFGNVVDGDRDC*VKGAPG
Trigger: CCCAGGAGCCCCCTTGACCAAGCAGTCTCGATCCCC...ATCTACAACATTGCCAAAGTCCAGGGTAAAGCTAAAAGTTGATAAGTAGACAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR CAA 90 bp GCTTCTCCAGAAAATGATTGCACAGACTCAGAGAAGTCCAAAGTCATAGCAGAAGGGCTCTCACTGGATTaGATGGCAGAGGCTGTTTCT +
Preference number: 5 (lower is better)
Translates to: ASPENDCTDSEKSKVIAEGLSLD*MAEAVS
Trigger: AGAAACAGCCTCTGCCATCAAATCCAGTGAGAGCCC...TTCTGCTATGACTTTGGACTTCTCTGAGTCTGTGCAATCATTTTCTGGAGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR CAA 90 bp TCAGCCTACGATGGATTGCACATCACCCAAGGAGAAAGGAAGGCATGGAAAAGGGATATTAGCTGCATATaGAAACTTGGGGATCGAGAC +
Preference number: 5 (lower is better)
Translates to: SAYDGLHITQGERKAWKRDISCI*KLGDRD
Trigger: GTCTCGATCCCCAAGTTTCAATATGCAGCTAATATC...CCTTTTCCATGCCTTCCTTTCTCCTTGGGTGATGTGCAATCCATCGTAGGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR CAA 90 bp GCTTCTCCAGAAAATGATTGCACAGACTCAGAGAAGTCCAAAGTCATAGCAGAACTCAGTCTCACAGTGTaGAAATGGGACCGATCAGCC +
Preference number: 5 (lower is better)
Translates to: ASPENDCTDSEKSKVIAELSLTV*KWDRSA
Trigger: GGCTGATCGGTCCCATTTCAACACTGTGAGACTGAG...TTCTGCTATGACTTTGGACTTCTCTGAGTCTGTGCAATCATTTTCTGGAGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR CAA 90 bp TCAGCCTACGATGGATTGCACATCACCCAAGGAGAAAGGAAGGCATGGAAAAGGATTCTTTTATCCAACTaGGCATACATGGCACCAACC +
Preference number: 5 (lower is better)
Translates to: SAYDGLHITQGERKAWKRILLSN*AYMAPT
Trigger: GGTTGGTGCCATGTATGCCAAGTTGGATAAAAGAAT...CCTTTTCCATGCCTTCCTTTCTCCTTGGGTGATGTGCAATCCATCGTAGGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418596.7
CDS-3UTR CAA 90 bp TTGATCACACCACAACCTCTGAGCCTCTGTTTCTTGAGGATGAAGGTTGGGGTGGTCACTAGTCCTAGGTaGAAAGGACATCACTCAATA +
Preference number: 5 (lower is better)
Translates to: LITPQPLSLCFLRMKVGVVTSPR*KGHHSI
Trigger: TATTGAGTGATGTCCTTTCAACCTAGGACTAGTGAC...CACCCCAACCTTCATCCTCAAGAAACAGAGGCTCAGAGGTTGTGGTGTGATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418596.7
CDS-3UTR CAA 90 bp TTGATCACACCACAACCTCTGAGCCTCTGTTTCTTGAGGATGAAGGTTGGGGTGCCATGGATCCAATTGTaGAAGGTTCATGGTATATTG +
Preference number: 5 (lower is better)
Translates to: LITPQPLSLCFLRMKVGVPWIQL*KVHGIL
Trigger: CAATATACCATGAACCTTCAACAATTGGATCCATGG...CACCCCAACCTTCATCCTCAAGAAACAGAGGCTCAGAGGTTGTGGTGTGATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418596.7
CDS-3UTR CAA 90 bp TCAGCCTACGATGGATTGCACATCACCCAAGGAGAAAGGAAGGCATGGAAAAGGAAGCCATGGATCCAATaGTTGAAGGTTCATGGTATA +
Preference number: 5 (lower is better)
Translates to: SAYDGLHITQGERKAWKRKPWIQ*LKVHGI
Trigger: TATACCATGAACCTTCAACAATTGGATCCATGGCTT...CCTTTTCCATGCCTTCCTTTCTCCTTGGGTGATGTGCAATCCATCGTAGGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR CAA 90 bp ATTGTCTACTTATCAACTTTTAGCTTTACCCTGGACTTTGGCAATGTTGTAGATGTCAGTGGAGCCGTGTaGGATCGGGGAGCCAGGAAT +
Preference number: 5 (lower is better)
Translates to: IVYLSTFSFTLDFGNVVDVSGAV*DRGARN
Trigger: ATTCCTGGCTCCCCGATCCAACACGGCTCCACTGAC...ATCTACAACATTGCCAAAGTCCAGGGTAAAGCTAAAAGTTGATAAGTAGACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR CAA 90 bp GCTTCTCCAGAAAATGATTGCACAGACTCAGAGAAGTCCAAAGTCATAGCAGAATGGCTGAACGCCCAGTaGCTACTTTCCTTAAGCTTC +
Preference number: 5 (lower is better)
Translates to: ASPENDCTDSEKSKVIAEWLNAQ*LLSLSF
Trigger: GAAGCTTAAGGAAAGTAGCAACTGGGCGTTCAGCCA...TTCTGCTATGACTTTGGACTTCTCTGAGTCTGTGCAATCATTTTCTGGAGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR CAA 90 bp TTGATCACACCACAACCTCTGAGCCTCTGTTTCTTGAGGATGAAGGTTGGGGTGCAGTGTTTCAGCCAATaGTCTGTCCCTGATATATTT +
Preference number: 5 (lower is better)
Translates to: LITPQPLSLCFLRMKVGVQCFSQ*SVPDIF
Trigger: AAATATATCAGGGACAGACAATTGGCTGAAACACTG...CACCCCAACCTTCATCCTCAAGAAACAGAGGCTCAGAGGTTGTGGTGTGATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418596.7
CDS-3UTR CAA 90 bp CCTCTGAGGATGAAGATCACTATAAACAACTCTGATGAGATCATGCTGACACAATGGCTGAACGCCCAGTaGCTACTTTCCTTAAGCTTC +
Preference number: 5 (lower is better)
Translates to: PLRMKITINNSDEIMLTQWLNAQ*LLSLSF
Trigger: GAAGCTTAAGGAAAGTAGCAACTGGGCGTTCAGCCA...TTGTGTCAGCATGATCTCATCAGAGTTGTTTATAGTGATCTTCATCCTCAGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR CAA 90 bp TCAGCCTACGATGGATTGCACATCACCCAAGGAGAAAGGAAGGCATGGAAAAGGTATCGATTAGCATTGTaGGCTGCTAAATTAGTACCT +
Preference number: 5 (lower is better)
Translates to: SAYDGLHITQGERKAWKRYRLAL*AAKLVP
Trigger: AGGTACTAATTTAGCAGCCAACAATGCTAATCGATA...CCTTTTCCATGCCTTCCTTTCTCCTTGGGTGATGTGCAATCCATCGTAGGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR CAA 90 bp CAATGCTGGTACTTGCTTGACTGCCATTTACATAGTCAAATGATTTACTTGAGGCCAGTGTTTTTCATGTaGCCGTGGAAAGCCACTCAC +
Preference number: 5 (lower is better)
Translates to: QCWYLLDCHLHSQMIYLRPVFFM*PWKATH
Trigger: GTGAGTGGCTTTCCACGGCAACATGAAAAACACTGG...CCTCAAGTAAATCATTTGACTATGTAAATGGCAGTCAAGCAAGTACCAGCATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR CAA 90 bp AGGATGAAGATCACTATAAACAACTCTGATGAGATCATGCTGACACAATGCCCCAACCCCTGTGAGAAGTaGCACCATAAATTCAGGATC +
Preference number: 5 (lower is better)
Translates to: RMKITINNSDEIMLTQCPNPCEK*HHKFRI
Trigger: GATCCTGAATTTATGGTGCAACTTCTCACAGGGGTT...GGGGCATTGTGTCAGCATGATCTCATCAGAGTTGTTTATAGTGATCTTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR CAA 90 bp GCTTCTCCAGAAAATGATTGCACAGACTCAGAGAAGTCCAAAGTCATAGCAGAAAACCCCTGTGAGAAGTaGCACCATAAATTCAGGATC +
Preference number: 5 (lower is better)
Translates to: ASPENDCTDSEKSKVIAENPCEK*HHKFRI
Trigger: GATCCTGAATTTATGGTGCAACTTCTCACAGGGGTT...TTCTGCTATGACTTTGGACTTCTCTGAGTCTGTGCAATCATTTTCTGGAGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR CAA 90 bp GCTTCTCCAGAAAATGATTGCACAGACTCAGAGAAGTCCAAAGTCATAGCAGAATGCTGTACATACTGCTaGCGAACTACTGAATCTCGA +
Preference number: 5 (lower is better)
Translates to: ASPENDCTDSEKSKVIAECCTYC*RTTESR
Trigger: TCGAGATTCAGTAGTTCGCAAGCAGTATGTACAGCA...TTCTGCTATGACTTTGGACTTCTCTGAGTCTGTGCAATCATTTTCTGGAGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR CAA 90 bp AGGATGAAGATCACTATAAACAACTCTGATGAGATCATGCTGACACAATGCCCCAGTCAAATGATTTACTaGAGGAAGCACTGGCTGTCC +
Preference number: 5 (lower is better)
Translates to: RMKITINNSDEIMLTQCPSQMIY*RKHWLS
Trigger: GGACAGCCAGTGCTTCCTCAAGTAAATCATTTGACT...GGGGCATTGTGTCAGCATGATCTCATCAGAGTTGTTTATAGTGATCTTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR CAA 90 bp GCAGTCCGAGAAATCCTCGGCACTGTTGGAGTGACTTCAACTTTAAGGACTTTCGAGTATCGATTAGCATaGTTGGCTGCTAAATTAGTA +
Preference number: 5 (lower is better)
Translates to: AVREILGTVGVTSTLRTFEYRLA*LAAKLV
Trigger: TACTAATTTAGCAGCCAACAATGCTAATCGATACTC...GAAAGTCCTTAAAGTTGAAGTCACTCCAACAGTGCCGAGGATTTCTCGGACTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS TCA 90 bp TCACTCTTCTCACCTGGAACCCATCCGACAAAGAGATTGGTAAGATaGGGCAGGCATATATACAATAGCAGAATTATAACACAGCATGAG +
Preference number: 5 (lower is better)
Translates to: SLFSPGTHPTKRLVR*GRHIYNSRIITQHE
Trigger: CTCATGCTGTGTTATAATTCTGCTATTGTATATATGCCTGCCTCATCTTACCAATCTCTTTGTCGGATGGGTTCCAGGTGAGAAGAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490725.5
ENST00000498780.5
CDS TCA 90 bp AACAGCCTCATGAGGATAAGGACTCCTACAGGAATGCAAGCTCCATaGGTTTTGTTTACTGCTGTAATACCAGAAGTTAGAACAGTGCTT +
Preference number: 5 (lower is better)
Translates to: NSLMRIRTPTGMQAP*VLFTAVIPEVRTVL
Trigger: AAGCACTGTTCTAACTTCTGGTATTACAGCAGTAAACAAAACTCATGGAGCTTGCATTCCTGTAGGAGTCCTTATCCTCATGAGGCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490725.5
ENST00000498780.5
CDS-3UTR CAA 90 bp CAATGCTGGTACTTGCTTGACTGCCATTTACATAGTCAAATGATTTACTTGAGGACAGCAGAGGCACTCTaGGAGGCTGTATCTCATTAT +
Preference number: 5 (lower is better)
Translates to: QCWYLLDCHLHSQMIYLRTAEAL*EAVSHY
Trigger: ATAATGAGATACAGCCTCCAAGAGTGCCTCTGCTGT...CCTCAAGTAAATCATTTGACTATGTAAATGGCAGTCAAGCAAGTACCAGCATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR CAA 90 bp GATCCAATTGTTGAAGGTTCATGGTATATTGAAGGCTTGGATAAGGAGGGGATATGGTATATTGAAGGCTaGGATAAGGAGGGGATAGTG +
Preference number: 5 (lower is better)
Translates to: DPIVEGSWYIEGLDKEGIWYIEG*DKEGIV
Trigger: CACTATCCCCTCCTTATCCAAGCCTTCAATATACCA...TATCCCCTCCTTATCCAAGCCTTCAATATACCATGAACCTTCAACAATTGGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR CAA 90 bp GCTTCTCCAGAAAATGATTGCACAGACTCAGAGAAGTCCAAAGTCATAGCAGAATCAGGTGTTTCTTCATaGGTGTCAGCTCAACTGAAT +
Preference number: 5 (lower is better)
Translates to: ASPENDCTDSEKSKVIAESGVSS*VSAQLN
Trigger: ATTCAGTTGAGCTGACACCAATGAAGAAACACCTGA...TTCTGCTATGACTTTGGACTTCTCTGAGTCTGTGCAATCATTTTCTGGAGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR CAA 90 bp GCTTCTCCAGAAAATGATTGCACAGACTCAGAGAAGTCCAAAGTCATAGCAGAAAATGCTGGTACTTGCTaGACTGCCATTTACATAGTC +
Preference number: 5 (lower is better)
Translates to: ASPENDCTDSEKSKVIAENAGTC*TAIYIV
Trigger: GACTATGTAAATGGCAGTCAAGCAAGTACCAGCATT...TTCTGCTATGACTTTGGACTTCTCTGAGTCTGTGCAATCATTTTCTGGAGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR CAA 90 bp ATTGTCTACTTATCAACTTTTAGCTTTACCCTGGACTTTGGCAATGTTGTAGATCTGAGCCTCTGTTTCTaGAGGATGAAGGTTGGGGTG +
Preference number: 5 (lower is better)
Translates to: IVYLSTFSFTLDFGNVVDLSLCF*RMKVGV
Trigger: CACCCCAACCTTCATCCTCAAGAAACAGAGGCTCAG...ATCTACAACATTGCCAAAGTCCAGGGTAAAGCTAAAAGTTGATAAGTAGACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418596.7
CDS-3UTR CAA 90 bp AGGATGAAGATCACTATAAACAACTCTGATGAGATCATGCTGACACAATGCCCCGTGTCAGGTAATGCCTaGAATTCTGATAACCATTCT +
Preference number: 5 (lower is better)
Translates to: RMKITINNSDEIMLTQCPVSGNA*NSDNHS
Trigger: AGAATGGTTATCAGAATTCAAGGCATTACCTGACAC...GGGGCATTGTGTCAGCATGATCTCATCAGAGTTGTTTATAGTGATCTTCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR CAA 90 bp ATTGTCTACTTATCAACTTTTAGCTTTACCCTGGACTTTGGCAATGTTGTAGATCCAGTGTTTTTCATGTaGCCGTGGAAAGCCACTCAC +
Preference number: 5 (lower is better)
Translates to: IVYLSTFSFTLDFGNVVDPVFFM*PWKATH
Trigger: GTGAGTGGCTTTCCACGGCAACATGAAAAACACTGG...ATCTACAACATTGCCAAAGTCCAGGGTAAAGCTAAAAGTTGATAAGTAGACAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR CAA 90 bp AGGATGAAGATCACTATAAACAACTCTGATGAGATCATGCTGACACAATGCCCCCAGTGTTTCAGCCAATaGTCTGTCCCTGATATATTT +
Preference number: 5 (lower is better)
Translates to: RMKITINNSDEIMLTQCPQCFSQ*SVPDIF
Trigger: AAATATATCAGGGACAGACAATTGGCTGAAACACTG...GGGGCATTGTGTCAGCATGATCTCATCAGAGTTGTTTATAGTGATCTTCATCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR CAA 90 bp ATTGTCTACTTATCAACTTTTAGCTTTACCCTGGACTTTGGCAATGTTGTAGATTACAGTAGTGCATTCTaGGCTCACTGCAACCTCCAC +
Preference number: 5 (lower is better)
Translates to: IVYLSTFSFTLDFGNVVDYSSAF*AHCNLH
Trigger: GTGGAGGTTGCAGTGAGCCAAGAATGCACTACTGTA...ATCTACAACATTGCCAAAGTCCAGGGTAAAGCTAAAAGTTGATAAGTAGACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR CAA 90 bp ATTGTCTACTTATCAACTTTTAGCTTTACCCTGGACTTTGGCAATGTTGTAGATGACTTTCTGGCCTTCTaGTGTAGAATCAGGAGCATC +
Preference number: 5 (lower is better)
Translates to: IVYLSTFSFTLDFGNVVDDFLAF*CRIRSI
Trigger: GATGCTCCTGATTCTACACAAGAAGGCCAGAAAGTC...ATCTACAACATTGCCAAAGTCCAGGGTAAAGCTAAAAGTTGATAAGTAGACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR CAA 90 bp CAAAGCACTGATAGCTCTGATGTATTCTGTGGAAGGATAACTTATAACAGTTTATCGAGTCAGCCTCGTTaGAGAAGTCAAAGCCATCTT +
Preference number: 5 (lower is better)
Translates to: QSTDSSDVFCGRITYNSLSSQPR*RSQSHL
Trigger: AAGATGGCTTTGACTTCTCAAACGAGGCTGACTCGA...TAAACTGTTATAAGTTATCCTTCCACAGAATACATCAGAGCTATCAGTGCTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR CAA 90 bp CAATGCTGGTACTTGCTTGACTGCCATTTACATAGTCAAATGATTTACTTGAGGAAGCCATGGATCCAATaGTTGAAGGTTCATGGTATA +
Preference number: 5 (lower is better)
Translates to: QCWYLLDCHLHSQMIYLRKPWIQ*LKVHGI
Trigger: TATACCATGAACCTTCAACAATTGGATCCATGGCTT...CCTCAAGTAAATCATTTGACTATGTAAATGGCAGTCAAGCAAGTACCAGCATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR CAA 90 bp CAAAGCACTGATAGCTCTGATGTATTCTGTGGAAGGATAACTTATAACAGTTTATGCTGTACATACTGCTaGCGAACTACTGAATCTCGA +
Preference number: 5 (lower is better)
Translates to: QSTDSSDVFCGRITYNSLCCTYC*RTTESR
Trigger: TCGAGATTCAGTAGTTCGCAAGCAGTATGTACAGCA...TAAACTGTTATAAGTTATCCTTCCACAGAATACATCAGAGCTATCAGTGCTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR CAA 90 bp ATTGTCTACTTATCAACTTTTAGCTTTACCCTGGACTTTGGCAATGTTGTAGATACTAAGATCAGTTGGTaGCTGTACATACTGCTTGCG +
Preference number: 5 (lower is better)
Translates to: IVYLSTFSFTLDFGNVVDTKISW*LYILLA
Trigger: CGCAAGCAGTATGTACAGCAACCAACTGATCTTAGT...ATCTACAACATTGCCAAAGTCCAGGGTAAAGCTAAAAGTTGATAAGTAGACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR CAA 90 bp GATCCAATTGTTGAAGGTTCATGGTATATTGAAGGCTTGGATAAGGAGGGGATATATCGATTAGCATTGTaGGCTGCTAAATTAGTACCT +
Preference number: 5 (lower is better)
Translates to: DPIVEGSWYIEGLDKEGIYRLAL*AAKLVP
Trigger: AGGTACTAATTTAGCAGCCAACAATGCTAATCGATA...TATCCCCTCCTTATCCAAGCCTTCAATATACCATGAACCTTCAACAATTGGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286181.7
CDS-3UTR CAA 90 bp ATTGTCTACTTATCAACTTTTAGCTTTACCCTGGACTTTGGCAATGTTGTAGATTCAGGTGTTTCTTCATaGGTGTCAGCTCAACTGAAT +
Preference number: 5 (lower is better)
Translates to: IVYLSTFSFTLDFGNVVDSGVSS*VSAQLN
Trigger: ATTCAGTTGAGCTGACACCAATGAAGAAACACCTGA...ATCTACAACATTGCCAAAGTCCAGGGTAAAGCTAAAAGTTGATAAGTAGACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR CAA 90 bp CAAAGCACTGATAGCTCTGATGTATTCTGTGGAAGGATAACTTATAACAGTTTAAATGCTGGTACTTGCTaGACTGCCATTTACATAGTC +
Preference number: 5 (lower is better)
Translates to: QSTDSSDVFCGRITYNSLNAGTC*TAIYIV
Trigger: GACTATGTAAATGGCAGTCAAGCAAGTACCAGCATT...TAAACTGTTATAAGTTATCCTTCCACAGAATACATCAGAGCTATCAGTGCTTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR CAA 90 bp ATTGTCTACTTATCAACTTTTAGCTTTACCCTGGACTTTGGCAATGTTGTAGATGATATTAGCTGCATATaGAAACTTGGGGATCGAGAC +
Preference number: 5 (lower is better)
Translates to: IVYLSTFSFTLDFGNVVDDISCI*KLGDRD
Trigger: GTCTCGATCCCCAAGTTTCAATATGCAGCTAATATC...ATCTACAACATTGCCAAAGTCCAGGGTAAAGCTAAAAGTTGATAAGTAGACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR CAA 90 bp ATTGTCTACTTATCAACTTTTAGCTTTACCCTGGACTTTGGCAATGTTGTAGATATCAATATGACCATCTaGGCAGGGAAAACTGTACCA +
Preference number: 5 (lower is better)
Translates to: IVYLSTFSFTLDFGNVVDINMTI*AGKTVP
Trigger: TGGTACAGTTTTCCCTGCCAAGATGGTCATATTGAT...ATCTACAACATTGCCAAAGTCCAGGGTAAAGCTAAAAGTTGATAAGTAGACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418596.7
CDS-3UTR CAA 90 bp CAAAGCACTGATAGCTCTGATGTATTCTGTGGAAGGATAACTTATAACAGTTTAGTGTCAGGTAATGCCTaGAATTCTGATAACCATTCT +
Preference number: 5 (lower is better)
Translates to: QSTDSSDVFCGRITYNSLVSGNA*NSDNHS
Trigger: AGAATGGTTATCAGAATTCAAGGCATTACCTGACAC...TAAACTGTTATAAGTTATCCTTCCACAGAATACATCAGAGCTATCAGTGCTTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR CAA 90 bp ATTGTCTACTTATCAACTTTTAGCTTTACCCTGGACTTTGGCAATGTTGTAGATCCATGGATCCAATTGTaGAAGGTTCATGGTATATTG +
Preference number: 5 (lower is better)
Translates to: IVYLSTFSFTLDFGNVVDPWIQL*KVHGIL
Trigger: CAATATACCATGAACCTTCAACAATTGGATCCATGG...ATCTACAACATTGCCAAAGTCCAGGGTAAAGCTAAAAGTTGATAAGTAGACAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR CAA 90 bp ATTGTCTACTTATCAACTTTTAGCTTTACCCTGGACTTTGGCAATGTTGTAGATAAAGACAGAACTTTATaGTTCCCATCTTTATCAGCG +
Preference number: 5 (lower is better)
Translates to: IVYLSTFSFTLDFGNVVDKDRTL*FPSLSA
Trigger: CGCTGATAAAGATGGGAACAATAAAGTTCTGTCTTT...ATCTACAACATTGCCAAAGTCCAGGGTAAAGCTAAAAGTTGATAAGTAGACAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS-3UTR CAA 90 bp ATTGTCTACTTATCAACTTTTAGCTTTACCCTGGACTTTGGCAATGTTGTAGATGAGTATCGATTAGCATaGTTGGCTGCTAAATTAGTA +
Preference number: 5 (lower is better)
Translates to: IVYLSTFSFTLDFGNVVDEYRLA*LAAKLV
Trigger: TACTAATTTAGCAGCCAACAATGCTAATCGATACTC...ATCTACAACATTGCCAAAGTCCAGGGTAAAGCTAAAAGTTGATAAGTAGACAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286181.7
ENST00000418596.7
CDS CCA 72 bp TGCAGTAAGCAGAGACTGCAGCATTGCACTCCAGCCTaGGAGAGCGAAACTCCATCTGGTTTACGAGAGGTT +
Preference number: 6 (lower is better)
Translates to: CSKQRLQHCTPA*ESETPSGLREV
Trigger: AACCTCTCGTAAACCAGATGGAGTTTCGCTCTCCCAGGCTGGAGTGCAATGCTGCAGTCTCTGCTTACTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453765.5
CDS TCA 72 bp CAAGAACTGCAGTGTGAACCTCTTAAGTCGAACCTCTaGGCTACGATAGAGCTCAAACAGCTGATGGCAGAC +
Preference number: 6 (lower is better)
Translates to: QELQCEPLKSNL*ATIELKQLMAD
Trigger: GTCTGCCATCAGCTGTTTGAGCTCTATCGTAGCTCAGAGGTTCGACTTAAGAGGTTCACACTGCAGTTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286181.7
ENST00000418596.7
ENST00000452799.5
ENST00000453765.5
ENST00000498780.5
ENST00000681958.1
CDS TCA 72 bp CTCAGCACCTTCTCTTCTCCATCTATGACGACGGATTaGAGCTGTTGTAATTGCAGTCCGAGAAATCCTCGG +
Preference number: 6 (lower is better)
Translates to: LSTFSSPSMTTD*SCCNCSPRNPR
Trigger: CCGAGGATTTCTCGGACTGCAATTACAACAGCTTCAATCCGTCGTCATAGATGGAGAAGAGAAGGTGCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418596.7
CDS TCA 72 bp CCATTTACACCCTCAGCACCTTCTCTTCTCCATCTATaGCGACGGATTGAAGCTGTTGTAATTGCAGTCCGA +
Preference number: 6 (lower is better)
Translates to: PFTPSAPSLLHL*RRIEAVVIAVR
Trigger: TCGGACTGCAATTACAACAGCTTCAATCCGTCGTCATAGATGGAGAAGAGAAGGTGCTGAGGGTGTAAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418596.7
CDS CAA 90 bp AGGAGGTGGCACAGGAATTCGGCAGAGTTCAAGTGGGGAATTCATTaGTTAAGAGTTAAATATTTTCCAATTCGGCTACCGCCTTTCCAG +
Preference number: 6 (lower is better)
Translates to: RRWHRNSAEFKWGIH*LRVKYFPIRLPPFQ
Trigger: CTGGAAAGGCGGTAGCCGAATTGGAAAATATTTAACTCTTAACAAATGAATTCCCCACTTGAACTCTGCCGAATTCCTGTGCCACCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474118.5
CDS CAA 90 bp CATGCTGACACAATGCCCCTTCTGTCAAAGCCATGGATCCAATTGTaGAAGGCTACAAAAATAAGGTACAGTATGAGACAATGTCTCTAC +
Preference number: 6 (lower is better)
Translates to: HADTMPLLSKPWIQL*KATKIRYSMRQCLY
Trigger: GTAGAGACATTGTCTCATACTGTACCTTATTTTTGTAGCCTTCAACAATTGGATCCATGGCTTTGACAGAAGGGGCATTGTGTCAGCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490725.5
CDS CAA 72 bp ATCCACCCCCTACATACAAATGAGACACACACATCATaGGTACTATTGCTAATCACTTTCTCCAACACAGAG +
Preference number: 6 (lower is better)
Translates to: IHPLHTNETHTS*VLLLITFSNTE
Trigger: CTCTGTGTTGGAGAAAGTGATTAGCAATAGTACCAATGATGTGTGTGTCTCATTTGTATGTAGGGGGTGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000490725.5
ENST00000498780.5
CDS TCA 72 bp TCACCTGGAACCCATCCGACAAAGAGATTGGTAAGATaGGGCAGGCATATATACAATAGCAGAATTATAACA +
Preference number: 6 (lower is better)
Translates to: SPGTHPTKRLVR*GRHIYNSRIIT
Trigger: TGTTATAATTCTGCTATTGTATATATGCCTGCCTCATCTTACCAATCTCTTTGTCGGATGGGTTCCAGGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490725.5
ENST00000498780.5