RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM126A (Homo sapiens)

Ensembl gene IDs: ENSG00000122591

Ensembl transcript IDs: ENST00000409763.1, ENST00000409923.5, ENST00000421730.1, ENST00000432176.7, ENST00000440481.6, ENST00000465661.2, ENST00000467005.6, ENST00000477349.5, ENST00000498833.1, ENST00000679789.1, ENST00000679826.1, ENST00000680721.1, ENST00000681079.1, ENST00000681237.1, ENST00000681402.1, ENST00000681468.1, ENST00000681766.1

Found 1294 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGAAAACCTATTGGCATCTGTCCCAGCCCCACAACCAACAGCAGATaGCGGGTTATGTGGGACTGTGACACCACTGACTTGTTCAAAGGA +
Preference number: 1 (lower is better)
Translates to: GKPIGICPSPTTNSR*RVMWDCDTTDLFKG
Trigger: TCCTTTGAACAAGTCAGTGGTGTCACAGTCCCACATAACCCGTCATCTGCTGTTGGTTGTGGGGCTGGGACAGATGCCAATAGGTTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR TCA 90 bp TTTGTATTGGGAGTCCCCAAGACCACGCCAGCACCCCAGGTTCAGTaGTTCAACAGAAGCACTCACAAGGCTCAGCATATAGTCATACTC +
Preference number: 1 (lower is better)
Translates to: FVLGVPKTTPAPQVQ*FNRSTHKAQHIVIL
Trigger: GAGTATGACTATATGCTGAGCCTTGTGAGTGCTTCTGTTGAATCACTGAACCTGGGGTGCTGGCGTGGTCTTGGGGACTCCCAATACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR CCA 90 bp AAAATTTCCATAGTGGTATACAAAGGACTCCAGGGTGCTTTCCTGTaGCTTCAGGAAGGGAAGGGAAGACATTTGCCCTGGGTAGTCTGG +
Preference number: 1 (lower is better)
Translates to: KISIVVYKGLQGAFL*LQEGKGRHLPWVVW
Trigger: CCAGACTACCCAGGGCAAATGTCTTCCCTTCCCTTCCTGAAGCCACAGGAAAGCACCCTGGAGTCCTTTGTATACCACTATGGAAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
3UTR TCA 90 bp CTGCATAAGCAGGAACAAGAGGAAAACACTAGCATGCTCTCTTGGTaGCTACAGCAAGGGACTATGAAGAAGGAAACCGCTGTGCAGTCA +
Preference number: 1 (lower is better)
Translates to: LHKQEQEENTSMLSW*LQQGTMKKETAVQS
Trigger: TGACTGCACAGCGGTTTCCTTCTTCATAGTCCCTTGCTGTAGTCACCAAGAGAGCATGCTAGTGTTTTCCTCTTGTTCCTGCTTATGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
3UTR TCA 90 bp TTGGGTCCCAGCCCAAAGCATGGGAATTTCCTAAGCCCTCTTTTATaGCTTGGCAGGCACTGGCATTCAGTTTTTGTCCTCCTAATATCC +
Preference number: 1 (lower is better)
Translates to: LGPSPKHGNFLSPLL*LGRHWHSVFVLLIS
Trigger: GGATATTAGGAGGACAAAAACTGAATGCCAGTGCCTGCCAAGTCATAAAAGAGGGCTTAGGAAATTCCCATGCTTTGGGCTGGGACCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR CCA 90 bp TCCCAGCCCAAAGCATGGGAATTTCCTAAGCCCTCTTTTATGACTTaGCAGGCACTGGCATTCAGTTTTTGTCCTCCTAATATCCTGGAG +
Preference number: 1 (lower is better)
Translates to: SQPKAWEFPKPSFMT*QALAFSFCPPNILE
Trigger: CTCCAGGATATTAGGAGGACAAAAACTGAATGCCAGTGCCTGCCAAGTCATAAAAGAGGGCTTAGGAAATTCCCATGCTTTGGGCTGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR TCA 90 bp GACCGTCTGTGGTTCTTTCCTATACTTGGCTTGTTACTACAATTGTaGCTACTGTTTGATAAACCCGACTGGCTGGTACTAGACGCAGCC +
Preference number: 1 (lower is better)
Translates to: DRLWFFPILGLLLQL*LLFDKPDWLVLDAA
Trigger: GGCTGCGTCTAGTACCAGCCAGTCGGGTTTATCAAACAGTAGTCACAATTGTAGTAACAAGCCAAGTATAGGAAAGAACCACAGACGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR TCA 90 bp AGGAAAACACTAGCATGCTCTCTTGGTGACTACAGCAAGGGACTATaGAGAAGGAAACCGCTGTGCAGTCACAGTGAAAAAGAGCCAAGA +
Preference number: 1 (lower is better)
Translates to: RKTLACSLGDYSKGL*RRKPLCSHSEKEPR
Trigger: TCTTGGCTCTTTTTCACTGTGACTGCACAGCGGTTTCCTTCTTCATAGTCCCTTGCTGTAGTCACCAAGAGAGCATGCTAGTGTTTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
3UTR TCA 90 bp AAGCCCTGCTCACCTGGGCAAACAGCTTGTTTCTCAAACAACAGTTaGCTTTTCAGGAATCTTCAAGAACCCTGCTTGCTGTGTCCACTA +
Preference number: 1 (lower is better)
Translates to: KPCSPGQTACFSNNS*LFRNLQEPCLLCPL
Trigger: TAGTGGACACAGCAAGCAGGGTTCTTGAAGATTCCTGAAAAGTCAACTGTTGTTTGAGAAACAAGCTGTTTGCCCAGGTGAGCAGGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR CCA 90 bp GCTGCGGTCTTAGCCAAACCATGGCTACTAGGCTTAGGTAGGGATTaGCTGGTTGTTAAAGTAAGTCTCTTCAAAGAGAGAAGCTCAAGA +
Preference number: 1 (lower is better)
Translates to: AAVLAKPWLLGLGRD*LVVKVSLFKERSSR
Trigger: TCTTGAGCTTCTCTCTTTGAAGAGACTTACTTTAACAACCAGCCAATCCCTACCTAAGCCTAGTAGCCATGGTTTGGCTAAGACCGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR TCA 90 bp GTCATACTCCTCAGCCCTATGACATGTAAAGCACAAAGCCAGGAATaGGGTCATTGTCTTATCACTTACCCCCAAAAGCTCTCAATGGCT +
Preference number: 1 (lower is better)
Translates to: VILLSPMTCKAQSQE*GHCLITYPQKLSMA
Trigger: AGCCATTGAGAGCTTTTGGGGGTAAGTGATAAGACAATGACCTCATTCCTGGCTTTGTGCTTTACATGTCATAGGGCTGAGGAGTATGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR CCA 90 bp CAATCTTATTACGTCTGTGTTTCCAACCACCTGGCCAGGTATAAATaGTGTAGATCTGTATCTTGGGATGGCTCACTTTCGGTGCAAAGC +
Preference number: 1 (lower is better)
Translates to: QSYYVCVSNHLARYK*CRSVSWDGSLSVQS
Trigger: GCTTTGCACCGAAAGTGAGCCATCCCAAGATACAGATCTACACCATTTATACCTGGCCAGGTGGTTGGAAACACAGACGTAATAAGATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR CCA 90 bp TGTCACTCATCCTCCAATCTTATTACGTCTGTGTTTCCAACCACCTaGCCAGGTATAAATGGTGTAGATCTGTATCTTGGGATGGCTCAC +
Preference number: 1 (lower is better)
Translates to: CHSSSNLITSVFPTT*PGINGVDLYLGMAH
Trigger: GTGAGCCATCCCAAGATACAGATCTACACCATTTATACCTGGCCAGGTGGTTGGAAACACAGACGTAATAAGATTGGAGGATGAGTGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR CCA 90 bp TTCCTAAGGTTGAAGACAATTCCTACAGGTGAAGCCCTGCTCACCTaGGCAAACAGCTTGTTTCTCAAACAACAGTTGACTTTTCAGGAA +
Preference number: 1 (lower is better)
Translates to: FLRLKTIPTGEALLT*ANSLFLKQQLTFQE
Trigger: TTCCTGAAAAGTCAACTGTTGTTTGAGAAACAAGCTGTTTGCCCAGGTGAGCAGGGCTTCACCTGTAGGAATTGTCTTCAACCTTAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR TCA 90 bp TGGTCCTCAGACCACACAGCTAGCAAAGGTCTAGAGAGGTCTAAATaGGGTTCCATTACAGTGATAGAACATGAAAATCTGATCTCTCAG +
Preference number: 1 (lower is better)
Translates to: WSSDHTASKGLERSK*GSITVIEHENLISQ
Trigger: CTGAGAGATCAGATTTTCATGTTCTATCACTGTAATGGAACCTCATTTAGACCTCTCTAGACCTTTGCTAGCTGTGTGGTCTGAGGACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
3UTR GCA 90 bp AAGCTGAAACACTGTAGGCTATGTCTAGCTAGTATCAGCATGCTGTaGAATACTGCTTGTATAACCAGTCTCAATTTTACCCCTTCAGGG +
Preference number: 1 (lower is better)
Translates to: KLKHCRLCLASISML*NTACITSLNFTPSG
Trigger: CCCTGAAGGGGTAAAATTGAGACTGGTTATACAAGCAGTATTGCACAGCATGCTGATACTAGCTAGACATAGCCTACAGTGTTTCAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR GCA 90 bp GCAATCCAAGAATTCAGCAAATACTCAAGAGGAAAACAAGGAAAGTaGCAGGCTCACTTCTCTGAACTTCCTGTCTTACTAGGATCTCTG +
Preference number: 1 (lower is better)
Translates to: AIQEFSKYSRGKQGK*QAHFSELPVLLGSL
Trigger: CAGAGATCCTAGTAAGACAGGAAGTTCAGAGAAGTGAGCCTGGCACTTTCCTTGTTTTCCTCTTGAGTATTTGCTGAATTCTTGGATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR CCA 90 bp TCAAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATaGCTACTAGGCTTAGGTAGGGATTGGCTGGTTGTTAAAGTAAGT +
Preference number: 1 (lower is better)
Translates to: SKDLLNTVAAVLAKP*LLGLGRDWLVVKVS
Trigger: ACTTACTTTAACAACCAGCCAATCCCTACCTAAGCCTAGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR CCA 90 bp TTTCATACACATCATTTTTGTGTTTCCACATGCCTGTTTTCAGATTaGCTTCCTGACCAGGAGCTAGAGAATTCCTGGAGTTGTGCCTCT +
Preference number: 1 (lower is better)
Translates to: FHTHHFCVSTCLFSD*LPDQELENSWSCAS
Trigger: AGAGGCACAACTCCAGGAATTCTCTAGCTCCTGGTCAGGAAGCCAATCTGAAAACAGGCATGTGGAAACACAAAAATGATGTGTATGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
3UTR TCA 90 bp AGGCTGGAATACCAAAGAGATTTACTGATATCCTCAAAGTCATCTTaGCCATCTGATTATTTAGCACCTCCTTCACCACAGGGCCTTTGT +
Preference number: 1 (lower is better)
Translates to: RLEYQRDLLISSKSS*PSDYLAPPSPQGLC
Trigger: ACAAAGGCCCTGTGGTGAAGGAGGTGCTAAATAATCAGATGGTCAAGATGACTTTGAGGATATCAGTAAATCTCTTTGGTATTCCAGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR CCA 90 bp AACACTAAGAAGTCACCAAAGATACATCAATTGTTGGAGCTCCAGTaGTACGATCAGTTAGCATGCCGTACTTATGACCTGTCAATTGCT +
Preference number: 1 (lower is better)
Translates to: NTKKSPKIHQLLELQ*YDQLACRTYDLSIA
Trigger: AGCAATTGACAGGTCATAAGTACGGCATGCTAACTGATCGTACCACTGGAGCTCCAACAATTGATGTATCTTTGGTGACTTCTTAGTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR CCA 90 bp TTCTGCATTTTTAACAAGATACCAGATAATGCCAATCCTACTTACTaGTCCTCAGACCACACAGCTAGCAAAGGTCTAGAGAGGTCTAAA +
Preference number: 1 (lower is better)
Translates to: FCIFNKIPDNANPTY*SSDHTASKGLERSK
Trigger: TTTAGACCTCTCTAGACCTTTGCTAGCTGTGTGGTCTGAGGACCAGTAAGTAGGATTGGCATTATCTGGTATCTTGTTAAAAATGCAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
3UTR CCA 90 bp TTCGGTGCAAAGCAGACTAGAAATACTGCTCATATTTATTCTCGCTaGAAAAAGTTCATTTCCTCACTGTCCTCCAGAACCATCTTTGAG +
Preference number: 1 (lower is better)
Translates to: FGAKQTRNTAHIYSR*KKFISSLSSRTIFE
Trigger: CTCAAAGATGGTTCTGGAGGACAGTGAGGAAATGAACTTTTTCCAGCGAGAATAAATATGAGCAGTATTTCTAGTCTGCTTTGCACCGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR CCA 90 bp ACACAAGATTCCAAGAATCCTTTGCCTGTGGAATCACACAGGCTGTaGTTAATTACTTCAGTACTGAATTGTGACAACAGGTGTGAAATG +
Preference number: 1 (lower is better)
Translates to: TQDSKNPLPVESHRL*LITSVLNCDNRCEM
Trigger: CATTTCACACCTGTTGTCACAATTCAGTACTGAAGTAATTAACCACAGCCTGTGTGATTCCACAGGCAAAGGATTCTTGGAATCTTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR TCA 90 bp TTGTTTCTCCAGTCCTGTGTGGTTTCCATAACTTGTTTGCTTCTCTaGTTCTTAACAGTAACTCTCTTCTTGGGCCTTTTACCCAGATTT +
Preference number: 1 (lower is better)
Translates to: LFLQSCVVSITCLLL*FLTVTLFLGLLPRF
Trigger: AAATCTGGGTAAAAGGCCCAAGAAGAGAGTTACTGTTAAGAATCAGAGAAGCAAACAAGTTATGGAAACCACACAGGACTGGAGAAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR TCA 90 bp TATAAAACAGTTATCTTGATATTAACAAAGTCGGGTTGTAGGAGGTaGGTCAGCTATGTGGACTACTGGAGTTACTGGAAGAGTGCATAT +
Preference number: 1 (lower is better)
Translates to: YKTVILILTKSGCRR*VSYVDYWSYWKSAY
Trigger: ATATGCACTCTTCCAGTAACTCCAGTAGTCCACATAGCTGACTCACCTCCTACAACCCGACTTTGTTAATATCAAGATAACTGTTTTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR TCA 90 bp AGAGGATTTGTTTATTACCAAGCACTTAGGGGATCATTTTTAATCTaGTTTCAGGAATTGGGATGGTTTGAATCCGTGCTGAATTCCCTG +
Preference number: 1 (lower is better)
Translates to: RGFVYYQALRGSFLI*FQELGWFESVLNSL
Trigger: CAGGGAATTCAGCACGGATTCAAACCATCCCAATTCCTGAAATCAGATTAAAAATGATCCCCTAAGTGCTTGGTAATAAACAAATCCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR CCA 90 bp CACAGATTCTTGAACAAATTTGACACAGTGACTGAAGAGAAACACTaGGCATGTAAGTTAAGGCAGCATTGTAACACAACAAAAGGAATG +
Preference number: 1 (lower is better)
Translates to: HRFLNKFDTVTEEKH*ACKLRQHCNTTKGM
Trigger: CATTCCTTTTGTTGTGTTACAATGCTGCCTTAACTTACATGCCCAGTGTTTCTCTTCAGTCACTGTGTCAAATTTGTTCAAGAATCTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000681237.1
ENST00000681402.1
3UTR GCA 90 bp AAGATACATCAATTGTTGGAGCTCCAGTGGTACGATCAGTTAGCATaGCGTACTTATGACCTGTCAATTGCTATATACATAATATTGACT +
Preference number: 1 (lower is better)
Translates to: KIHQLLELQWYDQLA*RTYDLSIAIYIILT
Trigger: AGTCAATATTATGTATATAGCAATTGACAGGTCATAAGTACGGCATGCTAACTGATCGTACCACTGGAGCTCCAACAATTGATGTATCTT
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR TCA 90 bp ATATTATACAGTGGTATCTTGAGAGCTATGTTGCAAGATTTACACTaGTTTCCAGGAAGTCTTCCAATGACGTATGCTCTGAATTATAGG +
Preference number: 1 (lower is better)
Translates to: ILYSGILRAMLQDLH*FPGSLPMTYALNYR
Trigger: CCTATAATTCAGAGCATACGTCATTGGAAGACTTCCTGGAAATCAGTGTAAATCTTGCAACATAGCTCTCAAGATACCACTGTATAATAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR TCA 90 bp GCCCCACAACCAACAGCAGATGACGGGTTATGTGGGACTGTGACACCACTGACTAGTTTTGCTTCCTCCTaGCCGTCTGTGGTTCTTTCC +
Preference number: 2 (lower is better)
Translates to: APQPTADDGLCGTVTPLTSFASS*PSVVLS
Trigger: GGAAAGAACCACAGACGGTCAGGAGGAAGCAAAACT...AGTCAGTGGTGTCACAGTCCCACATAACCCGTCATCTGCTGTTGGTTGTGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR TCA 90 bp GCCCCACAACCAACAGCAGATGACGGGTTATGTGGGACTGTGACACCACTGACTACAACCAACAGCAGATaGCGGGTTATGTGGGACTGT +
Preference number: 2 (lower is better)
Translates to: APQPTADDGLCGTVTPLTTTNSR*RVMWDC
Trigger: ACAGTCCCACATAACCCGTCATCTGCTGTTGGTTGT...AGTCAGTGGTGTCACAGTCCCACATAACCCGTCATCTGCTGTTGGTTGTGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR TCA 90 bp AACCGCTGTGCAGTCACAGTGAAAAAGAGCCAAGAACTGGACAGCTCCTTAGGTTCCTCAACGGTCAACTaGCTCAGCCTCAGCCGTGCT +
Preference number: 2 (lower is better)
Translates to: NRCAVTVKKSQELDSSLGSSTVN*LSLSRA
Trigger: AGCACGGCTGAGGCTGAGTCAGTTGACCGTTGAGGA...ACCTAAGGAGCTGTCCAGTTCTTGGCTCTTTTTCACTGTGACTGCACAGCGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CCA 90 bp TCCTGGGCTCGAGTGAACCTCCTGAGTAGTTGGGACTACTACTCACCACACATGGAGCTAGAGAATTCCTaGAGTTGTGCCTCTGCCCCA +
Preference number: 2 (lower is better)
Translates to: SWARVNLLSSWDYYSPHMELENS*SCASAP
Trigger: TGGGGCAGAGGCACAACTCCAGGAATTCTCTAGCTC...CATGTGTGGTGAGTAGTAGTCCCAACTACTCAGGAGGTTCACTCGAGCCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR-3UTR TCA 90 bp AGCAGGAACAAGAGGAAAACACTAGCATGCTCTCTTGGTGACTACAGCAAGGGATCCTCAACGGTCAACTaGCTCAGCCTCAGCCGTGCT +
Preference number: 2 (lower is better)
Translates to: SRNKRKTLACSLGDYSKGSSTVN*LSLSRA
Trigger: AGCACGGCTGAGGCTGAGTCAGTTGACCGTTGAGGA...TCCCTTGCTGTAGTCACCAAGAGAGCATGCTAGTGTTTTCCTCTTGTTCCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR GCA 90 bp GTCACAGTGAAAAAGAGCCAAGAACTGGACAGCTCCTTAGGTCTTCCTCAACGGACTCAGCCTCAGCCGTaGTTTCTCTCTCTCACTCTG +
Preference number: 2 (lower is better)
Translates to: VTVKKSQELDSSLGLPQRTQPQP*FLSLTL
Trigger: CAGAGTGAGAGAGAGAAAGCACGGCTGAGGCTGAGT...CCGTTGAGGAAGACCTAAGGAGCTGTCCAGTTCTTGGCTCTTTTTCACTGTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CCA 90 bp AACCGCTGTGCAGTCACAGTGAAAAAGAGCCAAGAACTGGACAGCTCCTTAGGTAAGCGGAAAACCTATTaGCATCTGTCCCAGCCCCAC +
Preference number: 2 (lower is better)
Translates to: NRCAVTVKKSQELDSSLGKRKTY*HLSQPH
Trigger: GTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTT...ACCTAAGGAGCTGTCCAGTTCTTGGCTCTTTTTCACTGTGACTGCACAGCGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000440481.6
ENST00000681237.1
ENST00000681402.1
3UTR CAA 90 bp CTGTCAGCATCTCCCTTTGAGGATGAGGTCCACTGTATACCACTTTaGACAAACCATGCTGGGATAGTGCACTCTCAGTCAGAGCCATGG +
Preference number: 2 (lower is better)
Translates to: LSASPFEDEVHCIPL*TNHAGIVHSQSEPW
Trigger: CCATGGCTCTGACTGAGAGTGCACTATCCCAGCATGGTTTGTCAAAAGTGGTATACAGTGGACCTCATCCTCAAAGGGAGATGCTGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CCA 90 bp GTCACAGTGAAAAAGAGCCAAGAACTGGACAGCTCCTTAGGTCTTCCTCAACGGCCTCCTGACCGTCTGTaGTTCTTTCCTATACTTGGC +
Preference number: 2 (lower is better)
Translates to: VTVKKSQELDSSLGLPQRPPDRL*FFPILG
Trigger: GCCAAGTATAGGAAAGAACCACAGACGGTCAGGAGG...CCGTTGAGGAAGACCTAAGGAGCTGTCCAGTTCTTGGCTCTTTTTCACTGTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000440481.6
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CCA 90 bp GCCCCACAACCAACAGCAGATGACGGGTTATGTGGGACTGTGACACCACTGACTGGCTTAGGTAGGGATTaGCTGGTTGTTAAAGTAAGT +
Preference number: 2 (lower is better)
Translates to: APQPTADDGLCGTVTPLTGLGRD*LVVKVS
Trigger: ACTTACTTTAACAACCAGCCAATCCCTACCTAAGCC...AGTCAGTGGTGTCACAGTCCCACATAACCCGTCATCTGCTGTTGGTTGTGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CCA 90 bp GGGCTCCTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAAGAAGCAAAGCGGAAAACCTATTaGCATCTGTCCCAGCCCCAC +
Preference number: 2 (lower is better)
Translates to: GLLSGIRMKDPGYFHKEAKRKTY*HLSQPH
Trigger: GTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTT...TGCTTCTTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAGGAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR TCA 90 bp ACAGCAGATGACGGGTTATGTGGGACTGTGACACCACTGACTTGTTCAAAGGATAGTTTTGCTTCCTCCTaGCCGTCTGTGGTTCTTTCC +
Preference number: 2 (lower is better)
Translates to: TADDGLCGTVTPLTCSKDSFASS*PSVVLS
Trigger: GGAAAGAACCACAGACGGTCAGGAGGAAGCAAAACT...ATCCTTTGAACAAGTCAGTGGTGTCACAGTCCCACATAACCCGTCATCTGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR TCA 90 bp CTTCTTGGAGACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAACTCACTTTGGGCTCTCTaGGTTTGTTTTCGAGCAAAG +
Preference number: 2 (lower is better)
Translates to: LLGDYKRKTYWHLSQPHNSLWAL*VCFRAK
Trigger: CTTTGCTCGAAAACAAACTCAGAGAGCCCAAAGTGA...GTTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTCTCCAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR TCA 90 bp AGCAGGAACAAGAGGAAAACACTAGCATGCTCTCTTGGTGACTACAGCAAGGGAAGCATGCTCTCTTGGTaGCTACAGCAAGGGACTATG +
Preference number: 2 (lower is better)
Translates to: SRNKRKTLACSLGDYSKGSMLSW*LQQGTM
Trigger: CATAGTCCCTTGCTGTAGTCACCAAGAGAGCATGCT...TCCCTTGCTGTAGTCACCAAGAGAGCATGCTAGTGTTTTCCTCTTGTTCCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR TCA 90 bp TCTTGGAGACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAACCATCATCCAGTGCTTTTTaGGCTAGATCCCATTCTCCA +
Preference number: 2 (lower is better)
Translates to: SWRLQAENLLASVPAPQPSSSAF*ARSHSP
Trigger: TGGAGAATGGGATCTAGCTCAAAAAGCACTGGATGA...TGGTTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTCTCCAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR GCA 90 bp TCTTCTTGGAGACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAACTTTTCCTCCAGTTTTaGTTCCTCCTGACCGTCTGT +
Preference number: 2 (lower is better)
Translates to: SSWRLQAENLLASVPAPQLFLQF*FLLTVC
Trigger: ACAGACGGTCAGGAGGAAGCAAAACTGGAGGAAAAG...TTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTCTCCAAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR GCA 90 bp ATTTCCATAGTGGTATACAAAGGACTCCAGGGTGCTTTCCTGTGGCTTCAGGAAACTCAGCCTCAGCCGTaGTTTCTCTCTCTCACTCTG +
Preference number: 2 (lower is better)
Translates to: ISIVVYKGLQGAFLWLQETQPQP*FLSLTL
Trigger: CAGAGTGAGAGAGAGAAAGCACGGCTGAGGCTGAGT...TTCCTGAAGCCACAGGAAAGCACCCTGGAGTCCTTTGTATACCACTATGGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR GCA 90 bp TCCTTAGGTCTTCCTCAACGGTCAACTGACTCAGCCTCAGCCGTGCTTTCTCTCGTTTCACTGCCCGATTaGCTTACAGTTCTTAACTAC +
Preference number: 2 (lower is better)
Translates to: SLGLPQRSTDSASAVLSLVSLPD*LTVLNY
Trigger: GTAGTTAAGAACTGTAAGGCAATCGGGCAGTGAAAC...GAGAGAAAGCACGGCTGAGGCTGAGTCAGTTGACCGTTGAGGAAGACCTAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CCA 90 bp ATTTCCATAGTGGTATACAAAGGACTCCAGGGTGCTTTCCTGTGGCTTCAGGAAGAGCTAGAGAATTCCTaGAGTTGTGCCTCTGCCCCA +
Preference number: 2 (lower is better)
Translates to: ISIVVYKGLQGAFLWLQEELENS*SCASAP
Trigger: TGGGGCAGAGGCACAACTCCAGGAATTCTCTAGCTC...TTCCTGAAGCCACAGGAAAGCACCCTGGAGTCCTTTGTATACCACTATGGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CCA 90 bp AACCGCTGTGCAGTCACAGTGAAAAAGAGCCAAGAACTGGACAGCTCCTTAGGTTGCCTGTTTTCAGATTaGCTTCCTGACCAGGAGCTA +
Preference number: 2 (lower is better)
Translates to: NRCAVTVKKSQELDSSLGCLFSD*LPDQEL
Trigger: TAGCTCCTGGTCAGGAAGCCAATCTGAAAACAGGCA...ACCTAAGGAGCTGTCCAGTTCTTGGCTCTTTTTCACTGTGACTGCACAGCGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR TCA 90 bp CCAGGAGCTAGAGAATTCCTGGAGTTGTGCCTCTGCCCCATTCTCTATAAAACATGTCAGGAATACGGATaGAAGACCCAGGGTACTTTC +
Preference number: 2 (lower is better)
Translates to: PGAREFLELCLCPILYKTCQEYG*KTQGTF
Trigger: GAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACA...TGTTTTATAGAGAATGGGGCAGAGGCACAACTCCAGGAATTCTCTAGCTCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
3UTR-3UTR TCA 90 bp GGGCTCCTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAAGAAGCATGTCAGGAATACGGATaGAAGACCCAGGGTACTTTC +
Preference number: 2 (lower is better)
Translates to: GLLSGIRMKDPGYFHKEACQEYG*KTQGTF
Trigger: GAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACA...TGCTTCTTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAGGAGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
3UTR-3UTR TCA 90 bp TCTGAGCTCTGCATAAGCAGGAACAAGAGGAAAACACTAGCATGCTCTCTTGGTTACAGCAAGGGACTATaGAGAAGGAAACCGCTGTGC +
Preference number: 2 (lower is better)
Translates to: SELCISRNKRKTLACSLGYSKGL*RRKPLC
Trigger: GCACAGCGGTTTCCTTCTTCATAGTCCCTTGCTGTA...ACCAAGAGAGCATGCTAGTGTTTTCCTCTTGTTCCTGCTTATGCAGAGCTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR TCA 90 bp TCTTGGAGACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAACCAGGTGTGATTTCAACTTaGATACACCTTGTACCTTCC +
Preference number: 2 (lower is better)
Translates to: SWRLQAENLLASVPAPQPGVIST*IHLVPS
Trigger: GGAAGGTACAAGGTGTATTCAAGTTGAAATCACACC...TGGTTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTCTCCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR GCA 90 bp TTCCTCCAGTTTTGCTTCCTCCTGACCGTCTGTGGTTCTTTCCTATACTTGGCTCTTTTCCTCCAGTTTTaGTTCCTCCTGACCGTCTGT +
Preference number: 2 (lower is better)
Translates to: FLQFCFLLTVCGSFLYLALFLQF*FLLTVC
Trigger: ACAGACGGTCAGGAGGAAGCAAAACTGGAGGAAAAG...AGCCAAGTATAGGAAAGAACCACAGACGGTCAGGAGGAAGCAAAACTGGAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR GCA 90 bp CTGTTTTCAGATTGGCTTCCTGACCAGGAGCTAGAGAATTCCTGGAGTTGTGCCACTAAATACAGTCGCTaGGGTCTTAGCCAAACCATG +
Preference number: 2 (lower is better)
Translates to: LFSDWLPDQELENSWSCATKYSR*GLSQTM
Trigger: CATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGT...GGCACAACTCCAGGAATTCTCTAGCTCCTGGTCAGGAAGCCAATCTGAAAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR GCA 90 bp AACCGCTGTGCAGTCACAGTGAAAAAGAGCCAAGAACTGGACAGCTCCTTAGGTAACAGTTCCCATACATaGAGACTCCCTTTGACTCTG +
Preference number: 2 (lower is better)
Translates to: NRCAVTVKKSQELDSSLGNSSHT*RLPLTL
Trigger: CAGAGTCAAAGGGAGTCTGCATGTATGGGAACTGTT...ACCTAAGGAGCTGTCCAGTTCTTGGCTCTTTTTCACTGTGACTGCACAGCGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR GCA 90 bp AACAGTTCCCATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCCTGGAGTTGTGCCTCTaGCCCATTCTCTATAAAACA +
Preference number: 2 (lower is better)
Translates to: NSSHTCRLPLTLKAKHTALELCL*PILYKT
Trigger: TGTTTTATAGAGAATGGGGCAGAGGCACAACTCCAG...GGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATGGGAACTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
3UTR-3UTR GCA 90 bp GTCACAGTGAAAAAGAGCCAAGAACTGGACAGCTCCTTAGGTCTTCCTCAACGGCTGGAGTTGTGCCTCTaGCCCATTCTCTATAAAACA +
Preference number: 2 (lower is better)
Translates to: VTVKKSQELDSSLGLPQRLELCL*PILYKT
Trigger: TGTTTTATAGAGAATGGGGCAGAGGCACAACTCCAG...CCGTTGAGGAAGACCTAAGGAGCTGTCCAGTTCTTGGCTCTTTTTCACTGTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR GCA 90 bp CTTGGAGACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAACCAAGACCCCTTATTGACATaGTGGTTACTGCATTTCTTG +
Preference number: 2 (lower is better)
Translates to: LGDYKRKTYWHLSQPHNQDPLLT*WLLHFL
Trigger: CAAGAAATGCAGTAACCAGCATGTCAATAAGGGGTC...TTGGTTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTCTCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CCA 90 bp TTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTAGGCTTAGGTTTTGATAAACCCGACTaGCTGGTACTAGACGCAGCC +
Preference number: 2 (lower is better)
Translates to: LLNTVAAVLAKPWLLGLGFDKPD*LVLDAA
Trigger: GGCTGCGTCTAGTACCAGCCAGTCGGGTTTATCAAA...ACCTAAGCCTAGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CCA 90 bp GGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTAGGCTTCCTCCTGACCGTCTGTaGTTCTTTCCTATACTTGGC +
Preference number: 2 (lower is better)
Translates to: GFTKYSRCGLSQTMATRLPPDRL*FFPILG
Trigger: GCCAAGTATAGGAAAGAACCACAGACGGTCAGGAGG...AAGCCTAGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CCA 90 bp TCTTGGAGACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAACCAGGCTTAGGTAGGGATTaGCTGGTTGTTAAAGTAAGT +
Preference number: 2 (lower is better)
Translates to: SWRLQAENLLASVPAPQPGLGRD*LVVKVS
Trigger: ACTTACTTTAACAACCAGCCAATCCCTACCTAAGCC...TGGTTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTCTCCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CCA 90 bp ACAGCAGATGACGGGTTATGTGGGACTGTGACACCACTGACTTGTTCAAAGGATGTCTTAGCCAAACCATaGCTACTAGGCTTAGGTAGG +
Preference number: 2 (lower is better)
Translates to: TADDGLCGTVTPLTCSKDVLAKP*LLGLGR
Trigger: CCTACCTAAGCCTAGTAGCCATGGTTTGGCTAAGAC...ATCCTTTGAACAAGTCAGTGGTGTCACAGTCCCACATAACCCGTCATCTGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CCA 90 bp ATAAAGTCAGGGGAGCCTTCAGAATTTAAGACATCAGGGCTCCTGTCAGGAATAAAGCGGAAAACCTATTaGCATCTGTCCCAGCCCCAC +
Preference number: 2 (lower is better)
Translates to: IKSGEPSEFKTSGLLSGIKRKTY*HLSQPH
Trigger: GTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTT...TATTCCTGACAGGAGCCCTGATGTCTTAAATTCTGAAGGCTCCCCTGACTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
3UTR CAA 90 bp GGGGTGAAGTCCAGAGGAAACCTGACACAAGATTCCAAGAATCCTTaGCCTGTGGAATCACACAGGCTGTGGTTAATTACTTCAGTACTG +
Preference number: 2 (lower is better)
Translates to: GVKSRGNLTQDSKNP*PVESHRLWLITSVL
Trigger: CAGTACTGAAGTAATTAACCACAGCCTGTGTGATTCCACAGGCAAAGGATTCTTGGAATCTTGTGTCAGGTTTCCTCTGGACTTCACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR-3UTR TCA 90 bp ATAAAGTCAGGGGAGCCTTCAGAATTTAAGACATCAGGGCTCCTGTCAGGAATAAGTTTTGCTTCCTCCTaGCCGTCTGTGGTTCTTTCC +
Preference number: 2 (lower is better)
Translates to: IKSGEPSEFKTSGLLSGISFASS*PSVVLS
Trigger: GGAAAGAACCACAGACGGTCAGGAGGAAGCAAAACT...TATTCCTGACAGGAGCCCTGATGTCTTAAATTCTGAAGGCTCCCCTGACTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR TCA 90 bp ACTGTGACACCACTGACTTGTTCAAAGGATTTACTAAATACAGTCGCTGCGGTCACAACCAACAGCAGATaGCGGGTTATGTGGGACTGT +
Preference number: 2 (lower is better)
Translates to: TVTPLTCSKDLLNTVAAVTTNSR*RVMWDC
Trigger: ACAGTCCCACATAACCCGTCATCTGCTGTTGGTTGT...GACCGCAGCGACTGTATTTAGTAAATCCTTTGAACAAGTCAGTGGTGTCACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR TCA 90 bp AAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTAGGACAACCAACAGCAGATaGCGGGTTATGTGGGACTGT +
Preference number: 2 (lower is better)
Translates to: KGFTKYSRCGLSQTMATRTTNSR*RVMWDC
Trigger: ACAGTCCCACATAACCCGTCATCTGCTGTTGGTTGT...CCTAGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR TCA 90 bp ATTTCCATAGTGGTATACAAAGGACTCCAGGGTGCTTTCCTGTGGCTTCAGGAATGTCAGGAATACGGATaGAAGACCCAGGGTACTTTC +
Preference number: 2 (lower is better)
Translates to: ISIVVYKGLQGAFLWLQECQEYG*KTQGTF
Trigger: GAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACA...TTCCTGAAGCCACAGGAAAGCACCCTGGAGTCCTTTGTATACCACTATGGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR TCA 90 bp ACAAGATACCAGATAATGCCAATCCTACTTACTGGTCCTCAGACCACACAGCTATACAGCAAGGGACTATaGAGAAGGAAACCGCTGTGC +
Preference number: 2 (lower is better)
Translates to: TRYQIMPILLTGPQTTQLYSKGL*RRKPLC
Trigger: GCACAGCGGTTTCCTTCTTCATAGTCCCTTGCTGTA...TAGCTGTGTGGTCTGAGGACCAGTAAGTAGGATTGGCATTATCTGGTATCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR TCA 90 bp TCCCATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAATGTCTTTTCCACCTATaGCCCCTTATTGACATGCTG +
Preference number: 2 (lower is better)
Translates to: SHTCRLPLTLKAKHTAIKCLFHL*PLIDML
Trigger: CAGCATGTCAATAAGGGGTCATAGGTGGAAAAGACA...TTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR TCA 90 bp TCCCATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAATTGCACCATGAATCCTaGAGAAACTGGTATCCTGCT +
Preference number: 2 (lower is better)
Translates to: SHTCRLPLTLKAKHTAIKLHHES*RNWYPA
Trigger: AGCAGGATACCAGTTTCTTCAGGATTCATGGTGCAA...TTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR GCA 90 bp TATCTGGTCACCCTCAGATGTTGTATCTTAGGATGGTCACTGCTGCTGGCCAGTTACGATCAGTTAGCATaGCGTACTTATGACCTGTCA +
Preference number: 2 (lower is better)
Translates to: YLVTLRCCILGWSLLLASYDQLA*RTYDLS
Trigger: TGACAGGTCATAAGTACGGCATGCTAACTGATCGTA...ACTGGCCAGCAGCAGTGACCATCCTAAGATACAACATCTGAGGGTGACCAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR-3UTR GCA 90 bp GTCACAGTGAAAAAGAGCCAAGAACTGGACAGCTCCTTAGGTCTTCCTCAACGGGACCCCTTATTGACATaGTGGTTACTGCATTTCTTG +
Preference number: 2 (lower is better)
Translates to: VTVKKSQELDSSLGLPQRDPLLT*WLLHFL
Trigger: CAAGAAATGCAGTAACCAGCATGTCAATAAGGGGTC...CCGTTGAGGAAGACCTAAGGAGCTGTCCAGTTCTTGGCTCTTTTTCACTGTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR GCA 90 bp ACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAAATAGGAGAGCCATGGACCCAATaGTGGAAGGTTCATGGTATA +
Preference number: 2 (lower is better)
Translates to: TCRLPLTLKAKHTAIKIGEPWTQ*WKVHGI
Trigger: TATACCATGAACCTTCCAGCATTGGGTCCATGGCTC...TCCTATTTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR GCA 90 bp GGGCTCCTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAAGAAGCATTCAAACCGATTCTGTaGTGTCAGCATCTCCCTTTG +
Preference number: 2 (lower is better)
Translates to: GLLSGIRMKDPGYFHKEAFKPIL*CQHLPL
Trigger: CAAAGGGAGATGCTGACAGCACAGAATCGGTTTGAA...TGCTTCTTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAGGAGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CCA 90 bp GAATTCCTGGAGTTGTGCCTCTGCCCCATTCTCTATAAAACAGTTCCCATACATTTTGATAAACCCGACTaGCTGGTACTAGACGCAGCC +
Preference number: 2 (lower is better)
Translates to: EFLELCLCPILYKTVPIHFDKPD*LVLDAA
Trigger: GGCTGCGTCTAGTACCAGCCAGTCGGGTTTATCAAA...ATGTATGGGAACTGTTTTATAGAGAATGGGGCAGAGGCACAACTCCAGGAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CCA 90 bp TTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTAGGCTTAGGGTCTTAGCCAAACCATaGCTACTAGGCTTAGGTAGG +
Preference number: 2 (lower is better)
Translates to: FTKYSRCGLSQTMATRLRVLAKP*LLGLGR
Trigger: CCTACCTAAGCCTAGTAGCCATGGTTTGGCTAAGAC...CCTAAGCCTAGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CCA 90 bp CTGACTTGTTCAAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCAAAGCGGAAAACCTATTaGCATCTGTCCCAGCCCCAC +
Preference number: 2 (lower is better)
Translates to: LTCSKDLLNTVAAVLAKPKRKTY*HLSQPH
Trigger: GTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTT...TGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTTGAACAAGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CCA 90 bp TCAGGGCTCCTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAAGAATGCCTGTTTTCAGATTaGCTTCCTGACCAGGAGCTA +
Preference number: 2 (lower is better)
Translates to: SGLLSGIRMKDPGYFHKECLFSD*LPDQEL
Trigger: TAGCTCCTGGTCAGGAAGCCAATCTGAAAACAGGCA...TTCTTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAGGAGCCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
3UTR-3UTR CCA 90 bp TATCTGGTCACCCTCAGATGTTGTATCTTAGGATGGTCACTGCTGCTGGCCAGTAGATCCTCTGAAATATaGGGTGCAAGACCCCAATTT +
Preference number: 2 (lower is better)
Translates to: YLVTLRCCILGWSLLLASRSSEI*GARPQF
Trigger: AAATTGGGGTCTTGCACCCCATATTTCAGAGGATCT...ACTGGCCAGCAGCAGTGACCATCCTAAGATACAACATCTGAGGGTGACCAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR-3UTR CCA 90 bp ACTAACTATCTGGTCACCCTCAGATGTTGTATCTTAGGATGGTCACTGCTGCTGGGTGAGTCAGCTATGTaGACTACTGGAGTTACTGGA +
Preference number: 2 (lower is better)
Translates to: TNYLVTLRCCILGWSLLLGESAM*TTGVTG
Trigger: TCCAGTAACTCCAGTAGTCCACATAGCTGACTCACC...CAGCAGCAGTGACCATCCTAAGATACAACATCTGAGGGTGACCAGATAGTTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR-3UTR TCA 90 bp AAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTAGGCTCACTTTGGGCTCTCTaGGTTTGTTTTCGAGCAAAG +
Preference number: 2 (lower is better)
Translates to: KDLLNTVAAVLAKPWLLGSLWAL*VCFRAK
Trigger: CTTTGCTCGAAAACAAACTCAGAGAGCCCAAAGTGA...GCCTAGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR TCA 90 bp ACAAGATACCAGATAATGCCAATCCTACTTACTGGTCCTCAGACCACACAGCTATGTCAGGAATACGGATaGAAGACCCAGGGTACTTTC +
Preference number: 2 (lower is better)
Translates to: TRYQIMPILLTGPQTTQLCQEYG*KTQGTF
Trigger: GAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACA...TAGCTGTGTGGTCTGAGGACCAGTAAGTAGGATTGGCATTATCTGGTATCTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR TCA 90 bp TCCCATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAAGGTGTGATTTCAACTTaGATACACCTTGTACCTTCC +
Preference number: 2 (lower is better)
Translates to: SHTCRLPLTLKAKHTAIKGVIST*IHLVPS
Trigger: GGAAGGTACAAGGTGTATTCAAGTTGAAATCACACC...TTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR TCA 90 bp TTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTAGGCTTAGGCCTATGACCCCTTATTaGCATGCTGGTTACTGCATT +
Preference number: 2 (lower is better)
Translates to: FTKYSRCGLSQTMATRLRPMTPY*HAGYCI
Trigger: AATGCAGTAACCAGCATGTCAATAAGGGGTCATAGG...CCTAAGCCTAGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR TCA 90 bp TCTGAGCTCTGCATAAGCAGGAACAAGAGGAAAACACTAGCATGCTCTCTTGGTCCTATGACCCCTTATTaGCATGCTGGTTACTGCATT +
Preference number: 2 (lower is better)
Translates to: SELCISRNKRKTLACSLGPMTPY*HAGYCI
Trigger: AATGCAGTAACCAGCATGTCAATAAGGGGTCATAGG...ACCAAGAGAGCATGCTAGTGTTTTCCTCTTGTTCCTGCTTATGCAGAGCTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR GCA 90 bp GAATTCCTGGAGTTGTGCCTCTGCCCCATTCTCTATAAAACAGTTCCCATACATCTTTTCCTCCAGTTTTaGTTCCTCCTGACCGTCTGT +
Preference number: 2 (lower is better)
Translates to: EFLELCLCPILYKTVPIHLFLQF*FLLTVC
Trigger: ACAGACGGTCAGGAGGAAGCAAAACTGGAGGAAAAG...ATGTATGGGAACTGTTTTATAGAGAATGGGGCAGAGGCACAACTCCAGGAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR GCA 90 bp ACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAAATAGGAACTAAATACAGTCGCTaGGGTCTTAGCCAAACCATG +
Preference number: 2 (lower is better)
Translates to: TCRLPLTLKAKHTAIKIGTKYSR*GLSQTM
Trigger: CATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGT...TCCTATTTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR GCA 90 bp GATCTCTCAGCTCTGTCAGCTAACATTTCCCCAAACTTATTCTACAATGTTTCCACTCAGCCTCAGCCGTaGTTTCTCTCTCTCACTCTG +
Preference number: 2 (lower is better)
Translates to: DLSALSANISPNLFYNVSTQPQP*FLSLTL
Trigger: CAGAGTGAGAGAGAGAAAGCACGGCTGAGGCTGAGT...GGAAACATTGTAGAATAAGTTTGGGGAAATGTTAGCTGACAGAGCTGAGAGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR GCA 90 bp ATTTCCATAGTGGTATACAAAGGACTCCAGGGTGCTTTCCTGTGGCTTCAGGAAAGGAAAACACTAGCATaGTCTCTTGGTGACTACAGC +
Preference number: 2 (lower is better)
Translates to: ISIVVYKGLQGAFLWLQERKTLA*SLGDYS
Trigger: GCTGTAGTCACCAAGAGAGCATGCTAGTGTTTTCCT...TTCCTGAAGCCACAGGAAAGCACCCTGGAGTCCTTTGTATACCACTATGGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR GCA 90 bp AGCAGGAACAAGAGGAAAACACTAGCATGCTCTCTTGGTGACTACAGCAAGGGAGTTTCACTGCCCGATTaGCTTACAGTTCTTAACTAC +
Preference number: 2 (lower is better)
Translates to: SRNKRKTLACSLGDYSKGVSLPD*LTVLNY
Trigger: GTAGTTAAGAACTGTAAGGCAATCGGGCAGTGAAAC...TCCCTTGCTGTAGTCACCAAGAGAGCATGCTAGTGTTTTCCTCTTGTTCCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CCA 90 bp TCCCATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAAGGCTTAGGTAGGGATTaGCTGGTTGTTAAAGTAAGT +
Preference number: 2 (lower is better)
Translates to: SHTCRLPLTLKAKHTAIKGLGRD*LVVKVS
Trigger: ACTTACTTTAACAACCAGCCAATCCCTACCTAAGCC...TTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CCA 90 bp ACTGTGACACCACTGACTTGTTCAAAGGATTTACTAAATACAGTCGCTGCGGTCGTCTTAGCCAAACCATaGCTACTAGGCTTAGGTAGG +
Preference number: 2 (lower is better)
Translates to: TVTPLTCSKDLLNTVAAVVLAKP*LLGLGR
Trigger: CCTACCTAAGCCTAGTAGCCATGGTTTGGCTAAGAC...GACCGCAGCGACTGTATTTAGTAAATCCTTTGAACAAGTCAGTGGTGTCACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR CAA 90 bp ATCTCTGCTCTCCCAAGTGCGATTGGTTTAAAGGCCCTGTTCTTTTaGTTTCTCCAGTCCTGTGTGGTTTCCATAACTTGTTTGCTTCTC +
Preference number: 2 (lower is better)
Translates to: ISALPSAIGLKALFF*FLQSCVVSITCLLL
Trigger: GAGAAGCAAACAAGTTATGGAAACCACACAGGACTGGAGAAACAAAAAGAACAGGGCCTTTAAACCAATCGCACTTGGGAGAGCAGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR-3UTR TCA 90 bp ACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAAATAGGATGTTTTCGAGCAAAGTaGTCTTTGCAAGATTCCCCT +
Preference number: 2 (lower is better)
Translates to: TCRLPLTLKAKHTAIKIGCFRAK*SLQDSP
Trigger: AGGGGAATCTTGCAAAGATCACTTTGCTCGAAAACA...TCCTATTTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR TCA 90 bp ATAAAGTCAGGGGAGCCTTCAGAATTTAAGACATCAGGGCTCCTGTCAGGAATATCACTTTGGGCTCTCTaGGTTTGTTTTCGAGCAAAG +
Preference number: 2 (lower is better)
Translates to: IKSGEPSEFKTSGLLSGISLWAL*VCFRAK
Trigger: CTTTGCTCGAAAACAAACTCAGAGAGCCCAAAGTGA...TATTCCTGACAGGAGCCCTGATGTCTTAAATTCTGAAGGCTCCCCTGACTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR TCA 90 bp GATCTCTCAGCTCTGTCAGCTAACATTTCCCCAAACTTATTCTACAATGTTTCCACAACCAACAGCAGATaGCGGGTTATGTGGGACTGT +
Preference number: 2 (lower is better)
Translates to: DLSALSANISPNLFYNVSTTNSR*RVMWDC
Trigger: ACAGTCCCACATAACCCGTCATCTGCTGTTGGTTGT...GGAAACATTGTAGAATAAGTTTGGGGAAATGTTAGCTGACAGAGCTGAGAGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440481.6
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR TCA 90 bp CCAGGAGCTAGAGAATTCCTGGAGTTGTGCCTCTGCCCCATTCTCTATAAAACACCTTACAACCTCACATaGGACATAACCAACTTGATT +
Preference number: 2 (lower is better)
Translates to: PGAREFLELCLCPILYKTPYNLT*DITNLI
Trigger: AATCAAGTTGGTTATGTCTCATGTGAGGTTGTAAGG...TGTTTTATAGAGAATGGGGCAGAGGCACAACTCCAGGAATTCTCTAGCTCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
3UTR-3UTR TCA 90 bp TTGCTTTTTCAAAACAAACTTCAGGCATCATTTAAATGCCGAGAATTCCAACTCTCCTCAACGGTCAACTaGCTCAGCCTCAGCCGTGCT +
Preference number: 2 (lower is better)
Translates to: LLFQNKLQASFKCREFQLSSTVN*LSLSRA
Trigger: AGCACGGCTGAGGCTGAGTCAGTTGACCGTTGAGGA...GAGTTGGAATTCTCGGCATTTAAATGATGCCTGAAGTTTGTTTTGAAAAAGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR TCA 90 bp TATCTGGTCACCCTCAGATGTTGTATCTTAGGATGGTCACTGCTGCTGGCCAGTCCCAATTTTCAAATTTaGAAGTTCAGTGGGGAGAAA +
Preference number: 2 (lower is better)
Translates to: YLVTLRCCILGWSLLLASPNFQI*KFSGEK
Trigger: TTTCTCCCCACTGAACTTTCAAATTTGAAAATTGGG...ACTGGCCAGCAGCAGTGACCATCCTAAGATACAACATCTGAGGGTGACCAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR-3UTR TCA 90 bp GGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTAGGCTTGGTTACTGCATTTCTTaGTATTCGAGAGGAAGTTGG +
Preference number: 2 (lower is better)
Translates to: GFTKYSRCGLSQTMATRLGYCIS*YSRGSW
Trigger: CCAACTTCCTCTCGAATATCAAGAAATGCAGTAACC...AAGCCTAGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR TCA 90 bp ATAAAGTCAGGGGAGCCTTCAGAATTTAAGACATCAGGGCTCCTGTCAGGAATACCTATGACCCCTTATTaGCATGCTGGTTACTGCATT +
Preference number: 2 (lower is better)
Translates to: IKSGEPSEFKTSGLLSGIPMTPY*HAGYCI
Trigger: AATGCAGTAACCAGCATGTCAATAAGGGGTCATAGG...TATTCCTGACAGGAGCCCTGATGTCTTAAATTCTGAAGGCTCCCCTGACTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR TCA 90 bp CTCTCTCTCACTCTGAATGATGACTTAAGTACATTTGCTTTACAGGGGAACCGCCCTATGACCCCTTATTaGCATGCTGGTTACTGCATT +
Preference number: 2 (lower is better)
Translates to: LSLTLNDDLSTFALQGNRPMTPY*HAGYCI
Trigger: AATGCAGTAACCAGCATGTCAATAAGGGGTCATAGG...GCGGTTCCCCTGTAAAGCAAATGTACTTAAGTCATCATTCAGAGTGAGAGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR TCA 90 bp GATGACGGGTTATGTGGGACTGTGACACCACTGACTTGTTCAAAGGATTTACTATGTCTTTTCCACCTATaGCCCCTTATTGACATGCTG +
Preference number: 2 (lower is better)
Translates to: DDGLCGTVTPLTCSKDLLCLFHL*PLIDML
Trigger: CAGCATGTCAATAAGGGGTCATAGGTGGAAAAGACA...TAGTAAATCCTTTGAACAAGTCAGTGGTGTCACAGTCCCACATAACCCGTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR TCA 90 bp CTCTCTCTCACTCTGAATGATGACTTAAGTACATTTGCTTTACAGGGGAACCGCTCATCCAGTGCTTTTTaGGCTAGATCCCATTCTCCA +
Preference number: 2 (lower is better)
Translates to: LSLTLNDDLSTFALQGNRSSSAF*ARSHSP
Trigger: TGGAGAATGGGATCTAGCTCAAAAAGCACTGGATGA...GCGGTTCCCCTGTAAAGCAAATGTACTTAAGTCATCATTCAGAGTGAGAGAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR GCA 90 bp ACAAGATACCAGATAATGCCAATCCTACTTACTGGTCCTCAGACCACACAGCTAAACAGTTCCCATACATaGAGACTCCCTTTGACTCTG +
Preference number: 2 (lower is better)
Translates to: TRYQIMPILLTGPQTTQLNSSHT*RLPLTL
Trigger: CAGAGTCAAAGGGAGTCTGCATGTATGGGAACTGTT...TAGCTGTGTGGTCTGAGGACCAGTAAGTAGGATTGGCATTATCTGGTATCTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR GCA 90 bp ATTTCCATAGTGGTATACAAAGGACTCCAGGGTGCTTTCCTGTGGCTTCAGGAACATATATCTGAGCTCTaGATAAGCAGGAACAAGAGG +
Preference number: 2 (lower is better)
Translates to: ISIVVYKGLQGAFLWLQEHISEL*ISRNKR
Trigger: CCTCTTGTTCCTGCTTATGCAGAGCTCAGATATATG...TTCCTGAAGCCACAGGAAAGCACCCTGGAGTCCTTTGTATACCACTATGGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR GCA 90 bp AGCAGGAACAAGAGGAAAACACTAGCATGCTCTCTTGGTGACTACAGCAAGGGAAATATCAAGTTTCACTaGCCGATTGCCTTACAGTTC +
Preference number: 2 (lower is better)
Translates to: SRNKRKTLACSLGDYSKGNIKFH*PIALQF
Trigger: GAACTGTAAGGCAATCGGGCAGTGAAACTTGATATT...TCCCTTGCTGTAGTCACCAAGAGAGCATGCTAGTGTTTTCCTCTTGTTCCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR GCA 90 bp TATCTGGTCACCCTCAGATGTTGTATCTTAGGATGGTCACTGCTGCTGGCCAGTTTGCTGGCTTGTTTTTaGTATTACAAGCAATACTGC +
Preference number: 2 (lower is better)
Translates to: YLVTLRCCILGWSLLLASLLACF*YYKQYC
Trigger: GCAGTATTGCTTGTAATAGCAAAAACAAGCCAGCAA...ACTGGCCAGCAGCAGTGACCATCCTAAGATACAACATCTGAGGGTGACCAGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR-3UTR GCA 90 bp ATTTCCATAGTGGTATACAAAGGACTCCAGGGTGCTTTCCTGTGGCTTCAGGAAGACCCCTTATTGACATaGTGGTTACTGCATTTCTTG +
Preference number: 2 (lower is better)
Translates to: ISIVVYKGLQGAFLWLQEDPLLT*WLLHFL
Trigger: CAAGAAATGCAGTAACCAGCATGTCAATAAGGGGTC...TTCCTGAAGCCACAGGAAAGCACCCTGGAGTCCTTTGTATACCACTATGGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR GCA 90 bp ACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAAATAGGAACTTTTGACAAACCATaGTGGGATAGTGCACTCTCA +
Preference number: 2 (lower is better)
Translates to: TCRLPLTLKAKHTAIKIGTFDKP*WDSALS
Trigger: TGAGAGTGCACTATCCCAGCATGGTTTGTCAAAAGT...TCCTATTTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CCA 90 bp ACTCGGTTTAAACTGGTAGCCAAAGCAGTTGCAGTTAAAACTATGTCCAGAGTATTTGATAAACCCGACTaGCTGGTACTAGACGCAGCC +
Preference number: 2 (lower is better)
Translates to: TRFKLVAKAVAVKTMSRVFDKPD*LVLDAA
Trigger: GGCTGCGTCTAGTACCAGCCAGTCGGGTTTATCAAA...TACTCTGGACATAGTTTTAACTGCAACTGCTTTGGCTACCAGTTTAAACCGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440481.6
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CCA 90 bp TGTTCAAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTAGTCTTAGCCAAACCATaGCTACTAGGCTTAGGTAGG +
Preference number: 2 (lower is better)
Translates to: CSKDLLNTVAAVLAKPWLVLAKP*LLGLGR
Trigger: CCTACCTAAGCCTAGTAGCCATGGTTTGGCTAAGAC...TAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTTGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CCA 90 bp AAATGTTTCAGAGATAACAACAGAAATGCCTCTAGCCATCCCCTGGAATCATATAAGCGGAAAACCTATTaGCATCTGTCCCAGCCCCAC +
Preference number: 2 (lower is better)
Translates to: KCFRDNNRNASSHPLESYKRKTY*HLSQPH
Trigger: GTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTT...ATATGATTCCAGGGGATGGCTAGAGGCATTTCTGTTGTTATCTCTGAAACATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CCA 90 bp GTCACAGTGAAAAAGAGCCAAGAACTGGACAGCTCCTTAGGTCTTCCTCAACGGATAAGCTTTTCTTCTTaGAGACTACAAGCGGAAAAC +
Preference number: 2 (lower is better)
Translates to: VTVKKSQELDSSLGLPQRISFSS*RLQAEN
Trigger: GTTTTCCGCTTGTAGTCTCCAAGAAGAAAAGCTTAT...CCGTTGAGGAAGACCTAAGGAGCTGTCCAGTTCTTGGCTCTTTTTCACTGTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000440481.6
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CCA 90 bp GCAAGATTTACACTGATTTCCAGGAAGTCTTCCAATGACGTATGCTCTGAATTAGAGCTAGAGAATTCCTaGAGTTGTGCCTCTGCCCCA +
Preference number: 2 (lower is better)
Translates to: ARFTLISRKSSNDVCSELELENS*SCASAP
Trigger: TGGGGCAGAGGCACAACTCCAGGAATTCTCTAGCTC...TAATTCAGAGCATACGTCATTGGAAGACTTCCTGGAAATCAGTGTAAATCTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
3UTR-3UTR CCA 90 bp CCAGATTTGGCAAATTCCATAATGGAAGAAGTAGCTGCAGAATGTCTGCTCACTTGCCTGTTTTCAGATTaGCTTCCTGACCAGGAGCTA +
Preference number: 2 (lower is better)
Translates to: PDLANSIMEEVAAECLLTCLFSD*LPDQEL
Trigger: TAGCTCCTGGTCAGGAAGCCAATCTGAAAACAGGCA...AGTGAGCAGACATTCTGCAGCTACTTCTTCCATTATGGAATTTGCCAAATCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR-3UTR CCA 90 bp CCAGATTTGGCAAATTCCATAATGGAAGAAGTAGCTGCAGAATGTCTGCTCACTAAGGGGAAAAGGACATaGGGTGAAGTCCAGAGGAAA +
Preference number: 2 (lower is better)
Translates to: PDLANSIMEEVAAECLLTKGKRT*GEVQRK
Trigger: TTTCCTCTGGACTTCACCCCATGTCCTTTTCCCCTT...AGTGAGCAGACATTCTGCAGCTACTTCTTCCATTATGGAATTTGCCAAATCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR-3UTR CCA 90 bp TTGGAGACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAACCAACTATTCGAGAGGAAGTTaGTGTGATTTCAACTTGAAT +
Preference number: 2 (lower is better)
Translates to: LETTSGKPIGICPSPTTNYSRGS*CDFNLN
Trigger: ATTCAAGTTGAAATCACACCAACTTCCTCTCGAATA...GTTGGTTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTCTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR CAA 90 bp CTCCAGTTTTGCTTCCTCCTGACCGTCTGTGGTTCTTTCCTATACTaGGCTTGTTACTACAATTGTGACTACTGTTTGATAAACCCGACT +
Preference number: 2 (lower is better)
Translates to: LQFCFLLTVCGSFLY*ACYYNCDYCLINPT
Trigger: AGTCGGGTTTATCAAACAGTAGTCACAATTGTAGTAACAAGCCAAGTATAGGAAAGAACCACAGACGGTCAGGAGGAAGCAAAACTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR TCA 90 bp GTGAGACCACTGGGAATTCTACATATTAGACGAGTAATTTGTTTGCACTCTGATAGTTTTGCTTCCTCCTaGCCGTCTGTGGTTCTTTCC +
Preference number: 2 (lower is better)
Translates to: VRPLGILHIRRVICLHSDSFASS*PSVVLS
Trigger: GGAAAGAACCACAGACGGTCAGGAGGAAGCAAAACT...ATCAGAGTGCAAACAAATTACTCGTCTAATATGTAGAATTCCCAGTGGTCTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440481.6
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR TCA 90 bp AAGAGAGAAGCTCAAGATTCTCACTTTGGGCTCTCTGAGTTTGTTTTCGAGCAATCACTTTGGGCTCTCTaGGTTTGTTTTCGAGCAAAG +
Preference number: 2 (lower is better)
Translates to: KREAQDSHFGLSEFVFEQSLWAL*VCFRAK
Trigger: CTTTGCTCGAAAACAAACTCAGAGAGCCCAAAGTGA...TTGCTCGAAAACAAACTCAGAGAGCCCAAAGTGAGAATCTTGAGCTTCTCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR TCA 90 bp TCTGAGCTCTGCATAAGCAGGAACAAGAGGAAAACACTAGCATGCTCTCTTGGTCGAGTTCATGCTTTTTaGAGAACTCGGTTTAAACTG +
Preference number: 2 (lower is better)
Translates to: SELCISRNKRKTLACSLGRVHAF*RTRFKL
Trigger: CAGTTTAAACCGAGTTCTTCAAAAAGCATGAACTCG...ACCAAGAGAGCATGCTAGTGTTTTCCTCTTGTTCCTGCTTATGCAGAGCTCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR TCA 90 bp AAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTAGGGGTGTGATTTCAACTTaGATACACCTTGTACCTTCC +
Preference number: 2 (lower is better)
Translates to: KGFTKYSRCGLSQTMATRGVIST*IHLVPS
Trigger: GGAAGGTACAAGGTGTATTCAAGTTGAAATCACACC...CCTAGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR TCA 90 bp ACAAGATACCAGATAATGCCAATCCTACTTACTGGTCCTCAGACCACACAGCTAGGTGTGATTTCAACTTaGATACACCTTGTACCTTCC +
Preference number: 2 (lower is better)
Translates to: TRYQIMPILLTGPQTTQLGVIST*IHLVPS
Trigger: GGAAGGTACAAGGTGTATTCAAGTTGAAATCACACC...TAGCTGTGTGGTCTGAGGACCAGTAAGTAGGATTGGCATTATCTGGTATCTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR GCA 90 bp GCAACCAGCAATGGCTCTGGATATAATTCTAGCTGGGCTCTGTATATAATATCACTTTTCCTCCAGTTTTaGTTCCTCCTGACCGTCTGT +
Preference number: 2 (lower is better)
Translates to: ATSNGSGYNSSWALYIISLFLQF*FLLTVC
Trigger: ACAGACGGTCAGGAGGAAGCAAAACTGGAGGAAAAG...TGATATTATATACAGAGCCCAGCTAGAATTATATCCAGAGCCATTGCTGGTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR GCA 90 bp CCACTGACTTGTTCAAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAAACTAAATACAGTCGCTaGGGTCTTAGCCAAACCATG +
Preference number: 2 (lower is better)
Translates to: PLTCSKDLLNTVAAVLAKTKYSR*GLSQTM
Trigger: CATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGT...TTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTTGAACAAGTCAGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR GCA 90 bp TCTGAGCTCTGCATAAGCAGGAACAAGAGGAAAACACTAGCATGCTCTCTTGGTAATATCAAGTTTCACTaGCCGATTGCCTTACAGTTC +
Preference number: 2 (lower is better)
Translates to: SELCISRNKRKTLACSLGNIKFH*PIALQF
Trigger: GAACTGTAAGGCAATCGGGCAGTGAAACTTGATATT...ACCAAGAGAGCATGCTAGTGTTTTCCTCTTGTTCCTGCTTATGCAGAGCTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR GCA 90 bp ACAGCAGATGACGGGTTATGTGGGACTGTGACACCACTGACTTGTTCAAAGGATATCCCTGTTAACATTTaGACCATGAATCCTGAAGAA +
Preference number: 2 (lower is better)
Translates to: TADDGLCGTVTPLTCSKDIPVNI*TMNPEE
Trigger: TTCTTCAGGATTCATGGTGCAAATGTTAACAGGGAT...ATCCTTTGAACAAGTCAGTGGTGTCACAGTCCCACATAACCCGTCATCTGCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CCA 90 bp AAATGTTTCAGAGATAACAACAGAAATGCCTCTAGCCATCCCCTGGAATCATATCCTCCTGACCGTCTGTaGTTCTTTCCTATACTTGGC +
Preference number: 2 (lower is better)
Translates to: KCFRDNNRNASSHPLESYPPDRL*FFPILG
Trigger: GCCAAGTATAGGAAAGAACCACAGACGGTCAGGAGG...ATATGATTCCAGGGGATGGCTAGAGGCATTTCTGTTGTTATCTCTGAAACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CCA 90 bp GGGCTCCTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAAGAAGCAATAAGCTTTTCTTCTTaGAGACTACAAGCGGAAAAC +
Preference number: 2 (lower is better)
Translates to: GLLSGIRMKDPGYFHKEAISFSS*RLQAEN
Trigger: GTTTTCCGCTTGTAGTCTCCAAGAAGAAAAGCTTAT...TGCTTCTTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAGGAGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CCA 90 bp TCGGTGCAAAGCAGACTAGAAATACTGCTCATATTTATTCTCGCTGGAAAAAGTTTGCCCTGGGTAGTCTaGGACAGTCCCTTGAAAAGT +
Preference number: 2 (lower is better)
Translates to: SVQSRLEILLIFILAGKSLPWVV*DSPLKS
Trigger: ACTTTTCAAGGGACTGTCCCAGACTACCCAGGGCAA...ACTTTTTCCAGCGAGAATAAATATGAGCAGTATTTCTAGTCTGCTTTGCACCGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR-3UTR CCA 90 bp TCAAAGAGAGAAGCTCAAGATTCTCACTTTGGGCTCTCTGAGTTTGTTTTCGAGTTTGACAAACCATGCTaGGATAGTGCACTCTCAGTC +
Preference number: 2 (lower is better)
Translates to: SKREAQDSHFGLSEFVFEFDKPC*DSALSV
Trigger: GACTGAGAGTGCACTATCCCAGCATGGTTTGTCAAA...CTCGAAAACAAACTCAGAGAGCCCAAAGTGAGAATCTTGAGCTTCTCTCTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CCA 90 bp ATAAAGTCAGGGGAGCCTTCAGAATTTAAGACATCAGGGCTCCTGTCAGGAATAACTGAAGAGAAACACTaGGCATGTAAGTTAAGGCAG +
Preference number: 2 (lower is better)
Translates to: IKSGEPSEFKTSGLLSGITEEKH*ACKLRQ
Trigger: CTGCCTTAACTTACATGCCCAGTGTTTCTCTTCAGT...TATTCCTGACAGGAGCCCTGATGTCTTAAATTCTGAAGGCTCCCCTGACTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR TCA 90 bp TCTTCAAAGAGAGAAGCTCAAGATTCTCACTTTGGGCTCTCTGAGTTTGTTTTCTCACTTTGGGCTCTCTaGGTTTGTTTTCGAGCAAAG +
Preference number: 2 (lower is better)
Translates to: SSKREAQDSHFGLSEFVFSLWAL*VCFRAK
Trigger: CTTTGCTCGAAAACAAACTCAGAGAGCCCAAAGTGA...GAAAACAAACTCAGAGAGCCCAAAGTGAGAATCTTGAGCTTCTCTCTTTGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR TCA 90 bp GGAATGAGGTCATTGTCTTATCACTTACCCCCAAAAGCTCTCAATGGCTCAACTCGAGTTCATGCTTTTTaGAGAACTCGGTTTAAACTG +
Preference number: 2 (lower is better)
Translates to: GMRSLSYHLPPKALNGSTRVHAF*RTRFKL
Trigger: CAGTTTAAACCGAGTTCTTCAAAAAGCATGAACTCG...AGTTGAGCCATTGAGAGCTTTTGGGGGTAAGTGATAAGACAATGACCTCATTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR-3UTR TCA 90 bp AAGAGAGAAGCTCAAGATTCTCACTTTGGGCTCTCTGAGTTTGTTTTCGAGCAAGAGAGGAAGTTGGTGTaGTTTCAACTTGAATACACC +
Preference number: 2 (lower is better)
Translates to: KREAQDSHFGLSEFVFEQERKLV*FQLEYT
Trigger: GGTGTATTCAAGTTGAAATCACACCAACTTCCTCTC...TTGCTCGAAAACAAACTCAGAGAGCCCAAAGTGAGAATCTTGAGCTTCTCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR TCA 90 bp ACCACTGACTTGTTCAAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAGGTTACTGCATTTCTTaGTATTCGAGAGGAAGTTGG +
Preference number: 2 (lower is better)
Translates to: TTDLFKGFTKYSRCGLSQGYCIS*YSRGSW
Trigger: CCAACTTCCTCTCGAATATCAAGAAATGCAGTAACC...TTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTTGAACAAGTCAGTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR TCA 90 bp GTGAGACCACTGGGAATTCTACATATTAGACGAGTAATTTGTTTGCACTCTGATGGGACCATGAGGCAATaGAGCCTTTATTGCATTAGC +
Preference number: 2 (lower is better)
Translates to: VRPLGILHIRRVICLHSDGTMRQ*SLYCIS
Trigger: GCTAATGCAATAAAGGCTTCATTGCCTCATGGTCCC...ATCAGAGTGCAAACAAATTACTCGTCTAATATGTAGAATTCCCAGTGGTCTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR GCA 90 bp ATCTCTCAGCTCTGTCAGCTAACATTTCCCCAAACTTATTCTACAATGTTTCCTCTTTTCCTCCAGTTTTaGTTCCTCCTGACCGTCTGT +
Preference number: 2 (lower is better)
Translates to: ISQLCQLTFPQTYSTMFPLFLQF*FLLTVC
Trigger: ACAGACGGTCAGGAGGAAGCAAAACTGGAGGAAAAG...AGGAAACATTGTAGAATAAGTTTGGGGAAATGTTAGCTGACAGAGCTGAGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000440481.6
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR GCA 90 bp ACTCGGTTTAAACTGGTAGCCAAAGCAGTTGCAGTTAAAACTATGTCCAGAGTAAACAGTTCCCATACATaGAGACTCCCTTTGACTCTG +
Preference number: 2 (lower is better)
Translates to: TRFKLVAKAVAVKTMSRVNSSHT*RLPLTL
Trigger: CAGAGTCAAAGGGAGTCTGCATGTATGGGAACTGTT...TACTCTGGACATAGTTTTAACTGCAACTGCTTTGGCTACCAGTTTAAACCGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR GCA 90 bp GCAAGATTTACACTGATTTCCAGGAAGTCTTCCAATGACGTATGCTCTGAATTAGAGCCATGGACCCAATaGTGGAAGGTTCATGGTATA +
Preference number: 2 (lower is better)
Translates to: ARFTLISRKSSNDVCSELEPWTQ*WKVHGI
Trigger: TATACCATGAACCTTCCAGCATTGGGTCCATGGCTC...TAATTCAGAGCATACGTCATTGGAAGACTTCCTGGAAATCAGTGTAAATCTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR GCA 90 bp ACCACTGACTTGTTCAAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACTTTTGACAAACCATaGTGGGATAGTGCACTCTCA +
Preference number: 2 (lower is better)
Translates to: TTDLFKGFTKYSRCGLSQTFDKP*WDSALS
Trigger: TGAGAGTGCACTATCCCAGCATGGTTTGTCAAAAGT...TTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTTGAACAAGTCAGTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR GCA 90 bp GATCTCTCAGCTCTGTCAGCTAACATTTCCCCAAACTTATTCTACAATGTTTCCTTCAAACCGATTCTGTaGTGTCAGCATCTCCCTTTG +
Preference number: 2 (lower is better)
Translates to: DLSALSANISPNLFYNVSFKPIL*CQHLPL
Trigger: CAAAGGGAGATGCTGACAGCACAGAATCGGTTTGAA...GGAAACATTGTAGAATAAGTTTGGGGAAATGTTAGCTGACAGAGCTGAGAGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR GCA 90 bp TTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTAGGCTTAGGATCCCTGTTAACATTTaGACCATGAATCCTGAAGAA +
Preference number: 2 (lower is better)
Translates to: FTKYSRCGLSQTMATRLRIPVNI*TMNPEE
Trigger: TTCTTCAGGATTCATGGTGCAAATGTTAACAGGGAT...CCTAAGCCTAGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CCA 90 bp ACAGCAGATGACGGGTTATGTGGGACTGTGACACCACTGACTTGTTCAAAGGATGTTCTTTCCTATACTTaGCTTGTTACTACAATTGTG +
Preference number: 2 (lower is better)
Translates to: TADDGLCGTVTPLTCSKDVLSYT*LVTTIV
Trigger: CACAATTGTAGTAACAAGCCAAGTATAGGAAAGAAC...ATCCTTTGAACAAGTCAGTGGTGTCACAGTCCCACATAACCCGTCATCTGCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CCA 90 bp TTCCTCCAGTTTTGCTTCCTCCTGACCGTCTGTGGTTCTTTCCTATACTTGGCTGTTCTTTCCTATACTTaGCTTGTTACTACAATTGTG +
Preference number: 2 (lower is better)
Translates to: FLQFCFLLTVCGSFLYLAVLSYT*LVTTIV
Trigger: CACAATTGTAGTAACAAGCCAAGTATAGGAAAGAAC...AGCCAAGTATAGGAAAGAACCACAGACGGTCAGGAGGAAGCAAAACTGGAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CCA 90 bp AAGAGAGAAGCTCAAGATTCTCACTTTGGGCTCTCTGAGTTTGTTTTCGAGCAAGGCTTAGGTAGGGATTaGCTGGTTGTTAAAGTAAGT +
Preference number: 2 (lower is better)
Translates to: KREAQDSHFGLSEFVFEQGLGRD*LVVKVS
Trigger: ACTTACTTTAACAACCAGCCAATCCCTACCTAAGCC...TTGCTCGAAAACAAACTCAGAGAGCCCAAAGTGAGAATCTTGAGCTTCTCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CCA 90 bp TTCAAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTGGCTTAGGTAGGGATTaGCTGGTTGTTAAAGTAAGT +
Preference number: 2 (lower is better)
Translates to: FKGFTKYSRCGLSQTMATGLGRD*LVVKVS
Trigger: ACTTACTTTAACAACCAGCCAATCCCTACCTAAGCC...AGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CCA 90 bp ATCTCTCAGCTCTGTCAGCTAACATTTCCCCAAACTTATTCTACAATGTTTCCTCCATGGACCCAATGCTaGAAGGTTCATGGTATACAG +
Preference number: 2 (lower is better)
Translates to: ISQLCQLTFPQTYSTMFPPWTQC*KVHGIQ
Trigger: CTGTATACCATGAACCTTCCAGCATTGGGTCCATGG...AGGAAACATTGTAGAATAAGTTTGGGGAAATGTTAGCTGACAGAGCTGAGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR TCA 90 bp AGGGTTCCTATTAAGTTAATACAATATCAAGTTTCACTGCCCGATTGCCTTACATGTCAGGAATACGGATaGAAGACCCAGGGTACTTTC +
Preference number: 2 (lower is better)
Translates to: RVPIKLIQYQVSLPDCLTCQEYG*KTQGTF
Trigger: GAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACA...TGTAAGGCAATCGGGCAGTGAAACTTGATATTGTATTAACTTAATAGGAACCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR TCA 90 bp CTCTCTCTCACTCTGAATGATGACTTAAGTACATTTGCTTTACAGGGGAACCGCCATTTTCCAGGGCTTTaGGCAAATTGTTCTAATCAT +
Preference number: 2 (lower is better)
Translates to: LSLTLNDDLSTFALQGNRHFPGL*ANCSNH
Trigger: ATGATTAGAACAATTTGCTCAAAGCCCTGGAAAATG...GCGGTTCCCCTGTAAAGCAAATGTACTTAAGTCATCATTCAGAGTGAGAGAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR TCA 90 bp CATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAAATATTAACATTTGCACCATaGATCCTGAAGAAACTGGTA +
Preference number: 2 (lower is better)
Translates to: HTCRLPLTLKAKHTAIKILTFAP*ILKKLV
Trigger: TACCAGTTTCTTCAGGATTCATGGTGCAAATGTTAA...TATTTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR GCA 90 bp GCAAGATTTACACTGATTTCCAGGAAGTCTTCCAATGACGTATGCTCTGAATTACTGGAGTTGTGCCTCTaGCCCATTCTCTATAAAACA +
Preference number: 2 (lower is better)
Translates to: ARFTLISRKSSNDVCSELLELCL*PILYKT
Trigger: TGTTTTATAGAGAATGGGGCAGAGGCACAACTCCAG...TAATTCAGAGCATACGTCATTGGAAGACTTCCTGGAAATCAGTGTAAATCTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
3UTR-3UTR GCA 90 bp AATGATGACTTAAGTACATTTGCTTTACAGGGGAACCGCAACCATAGCCAAAAGGTTTCACTGCCCGATTaGCTTACAGTTCTTAACTAC +
Preference number: 2 (lower is better)
Translates to: NDDLSTFALQGNRNHSQKVSLPD*LTVLNY
Trigger: GTAGTTAAGAACTGTAAGGCAATCGGGCAGTGAAAC...CTTTTGGCTATGGTTGCGGTTCCCCTGTAAAGCAAATGTACTTAAGTCATCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR GCA 90 bp TCGGTGCAAAGCAGACTAGAAATACTGCTCATATTTATTCTCGCTGGAAAAAGTAGGTGCCCGCCACTATaGCTGGCTAATTTTTGTATT +
Preference number: 2 (lower is better)
Translates to: SVQSRLEILLIFILAGKSRCPPL*LANFCI
Trigger: AATACAAAAATTAGCCAGGCATAGTGGCGGGCACCT...ACTTTTTCCAGCGAGAATAAATATGAGCAGTATTTCTAGTCTGCTTTGCACCGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR-3UTR CCA 90 bp TTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTAGGCTTAGGGTTCTTTCCTATACTTaGCTTGTTACTACAATTGTG +
Preference number: 2 (lower is better)
Translates to: FTKYSRCGLSQTMATRLRVLSYT*LVTTIV
Trigger: CACAATTGTAGTAACAAGCCAAGTATAGGAAAGAAC...CCTAAGCCTAGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CCA 90 bp AAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTAGGCCCTTATTGACATGCTaGTTACTGCATTTCTTGATA +
Preference number: 2 (lower is better)
Translates to: KGFTKYSRCGLSQTMATRPLLTC*LLHFLI
Trigger: TATCAAGAAATGCAGTAACCAGCATGTCAATAAGGG...CCTAGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CCA 90 bp CTCTCTCTCACTCTGAATGATGACTTAAGTACATTTGCTTTACAGGGGAACCGCCCCTTATTGACATGCTaGTTACTGCATTTCTTGATA +
Preference number: 2 (lower is better)
Translates to: LSLTLNDDLSTFALQGNRPLLTC*LLHFLI
Trigger: TATCAAGAAATGCAGTAACCAGCATGTCAATAAGGG...GCGGTTCCCCTGTAAAGCAAATGTACTTAAGTCATCATTCAGAGTGAGAGAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CCA 90 bp TTTCCAAAGTCCAGCAGTAGGGTAAATCAGCTTTACAGCCTATTATACCTTAATCCATGGACCCAATGCTaGAAGGTTCATGGTATACAG +
Preference number: 2 (lower is better)
Translates to: FPKSSSRVNQLYSLLYLNPWTQC*KVHGIQ
Trigger: CTGTATACCATGAACCTTCCAGCATTGGGTCCATGG...ATTAAGGTATAATAGGCTGTAAAGCTGATTTACCCTACTGCTGGACTTTGGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR TCA 90 bp ACTCGGTTTAAACTGGTAGCCAAAGCAGTTGCAGTTAAAACTATGTCCAGAGTACCTTACAACCTCACATaGGACATAACCAACTTGATT +
Preference number: 2 (lower is better)
Translates to: TRFKLVAKAVAVKTMSRVPYNLT*DITNLI
Trigger: AATCAAGTTGGTTATGTCTCATGTGAGGTTGTAAGG...TACTCTGGACATAGTTTTAACTGCAACTGCTTTGGCTACCAGTTTAAACCGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR TCA 90 bp TTAATTCTGTATTTCCATGTCTTTTCCACCTATGACCCCTTATTGACATGCTGGGAGAGGAAGTTGGTGTaGTTTCAACTTGAATACACC +
Preference number: 2 (lower is better)
Translates to: LILYFHVFSTYDPLLTCWERKLV*FQLEYT
Trigger: GGTGTATTCAAGTTGAAATCACACCAACTTCCTCTC...CCAGCATGTCAATAAGGGGTCATAGGTGGAAAAGACATGGAAATACAGAATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR TCA 90 bp AGGGTTCCTATTAAGTTAATACAATATCAAGTTTCACTGCCCGATTGCCTTACATGTCTTTTCCACCTATaGCCCCTTATTGACATGCTG +
Preference number: 2 (lower is better)
Translates to: RVPIKLIQYQVSLPDCLTCLFHL*PLIDML
Trigger: CAGCATGTCAATAAGGGGTCATAGGTGGAAAAGACA...TGTAAGGCAATCGGGCAGTGAAACTTGATATTGTATTAACTTAATAGGAACCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR TCA 90 bp GCAAGATTTACACTGATTTCCAGGAAGTCTTCCAATGACGTATGCTCTGAATTAACAAATTTGACACAGTaGCTGAAGAGAAACACTGGG +
Preference number: 2 (lower is better)
Translates to: ARFTLISRKSSNDVCSELTNLTQ*LKRNTG
Trigger: CCCAGTGTTTCTCTTCAGTCACTGTGTCAAATTTGT...TAATTCAGAGCATACGTCATTGGAAGACTTCCTGGAAATCAGTGTAAATCTTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR TCA 90 bp ATCTCTCAGCTCTGTCAGCTAACATTTCCCCAAACTTATTCTACAATGTTTCCTACAAATTTGACACAGTaGCTGAAGAGAAACACTGGG +
Preference number: 2 (lower is better)
Translates to: ISQLCQLTFPQTYSTMFPTNLTQ*LKRNTG
Trigger: CCCAGTGTTTCTCTTCAGTCACTGTGTCAAATTTGT...AGGAAACATTGTAGAATAAGTTTGGGGAAATGTTAGCTGACAGAGCTGAGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR TCA 90 bp CTGACTTGTTCAAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATTAACATTTGCACCATaGATCCTGAAGAAACTGGTA +
Preference number: 2 (lower is better)
Translates to: LTCSKDLLNTVAAVLAKPLTFAP*ILKKLV
Trigger: TACCAGTTTCTTCAGGATTCATGGTGCAAATGTTAA...TGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTTGAACAAGTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR GCA 90 bp GGAATGAGGTCATTGTCTTATCACTTACCCCCAAAAGCTCTCAATGGCTCAACTATGAAAACGAGTTCATaGTTTTTGAAGAACTCGGTT +
Preference number: 2 (lower is better)
Translates to: GMRSLSYHLPPKALNGSTMKTSS*FLKNSV
Trigger: AACCGAGTTCTTCAAAAAGCATGAACTCGTTTTCAT...AGTTGAGCCATTGAGAGCTTTTGGGGGTAAGTGATAAGACAATGACCTCATTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR-3UTR CCA 90 bp ATAAAGTCAGGGGAGCCTTCAGAATTTAAGACATCAGGGCTCCTGTCAGGAATAAATTCTGTATTTCCTTaGAGTGCAGTTATAAAGTGC +
Preference number: 2 (lower is better)
Translates to: IKSGEPSEFKTSGLLSGINSVFP*SAVIKC
Trigger: GCACTTTATAACTGCACTCCAAGGAAATACAGAATT...TATTCCTGACAGGAGCCCTGATGTCTTAAATTCTGAAGGCTCCCCTGACTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409923.5
ENST00000440481.6
3UTR-3UTR CCA 90 bp ATAAAGTCAGGGGAGCCTTCAGAATTTAAGACATCAGGGCTCCTGTCAGGAATAGTTCTTTCCTATACTTaGCTTGTTACTACAATTGTG +
Preference number: 2 (lower is better)
Translates to: IKSGEPSEFKTSGLLSGIVLSYT*LVTTIV
Trigger: CACAATTGTAGTAACAAGCCAAGTATAGGAAAGAAC...TATTCCTGACAGGAGCCCTGATGTCTTAAATTCTGAAGGCTCCCCTGACTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CCA 90 bp TTAACAGTAACTCTCTTCTTGGGCCTTTTACCCAGATTTGGCAAATTCCATAATCTGCCACTAACTATCTaGTCACCCTCAGATGTTGTA +
Preference number: 2 (lower is better)
Translates to: LTVTLFLGLLPRFGKFHNLPLTI*SPSDVV
Trigger: TACAACATCTGAGGGTGACCAGATAGTTAGTGGCAG...ATTATGGAATTTGCCAAATCTGGGTAAAAGGCCCAAGAAGAGAGTTACTGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR-3UTR CCA 90 bp AAGAGAGAAGCTCAAGATTCTCACTTTGGGCTCTCTGAGTTTGTTTTCGAGCAACCCTTATTGACATGCTaGTTACTGCATTTCTTGATA +
Preference number: 2 (lower is better)
Translates to: KREAQDSHFGLSEFVFEQPLLTC*LLHFLI
Trigger: TATCAAGAAATGCAGTAACCAGCATGTCAATAAGGG...TTGCTCGAAAACAAACTCAGAGAGCCCAAAGTGAGAATCTTGAGCTTCTCTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CCA 90 bp GAGAAACACTGGGCATGTAAGTTAAGGCAGCATTGTAACACAACAAAAGGAATGATGCTGGAAGGTTCATaGTATACAGATGGTTTGGAT +
Preference number: 2 (lower is better)
Translates to: EKHWACKLRQHCNTTKGMMLEGS*YTDGLD
Trigger: ATCCAAACCATCTGTATACCATGAACCTTCCAGCAT...CATTCCTTTTGTTGTGTTACAATGCTGCCTTAACTTACATGCCCAGTGTTTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CCA 90 bp GGGTTATGTGGGACTGTGACACCACTGACTTGTTCAAAGGATTTACTAAATACAATGCTGGAAGGTTCATaGTATACAGATGGTTTGGAT +
Preference number: 2 (lower is better)
Translates to: GLCGTVTPLTCSKDLLNTMLEGS*YTDGLD
Trigger: ATCCAAACCATCTGTATACCATGAACCTTCCAGCAT...TGTATTTAGTAAATCCTTTGAACAAGTCAGTGGTGTCACAGTCCCACATAACCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CCA 90 bp AATAAAATCCCTCGTCAACTTCAGATATCTCCATCAGTTCTTCTTGACCTGTTATTTGACAAACCATGCTaGGATAGTGCACTCTCAGTC +
Preference number: 2 (lower is better)
Translates to: NKIPRQLQISPSVLLDLLFDKPC*DSALSV
Trigger: GACTGAGAGTGCACTATCCCAGCATGGTTTGTCAAA...TAACAGGTCAAGAAGAACTGATGGAGATATCTGAAGTTGACGAGGGATTTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000681237.1
ENST00000681402.1
3UTR CAA 90 bp ATGTCCTATTGTACGAGTATTCATGGGTTTGCTTGCTTGTTTGGTTaGTCCTTCTTTCAAACATGTCCTGTCTCATCAAATTCAACTTGG +
Preference number: 2 (lower is better)
Translates to: MSYCTSIHGFACLFG*SFFQTCPVSSNSTW
Trigger: CCAAGTTGAATTTGATGAGACAGGACATGTTTGAAAGAAGGACAAACCAAACAAGCAAGCAAACCCATGAATACTCGTACAATAGGACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR CAA 90 bp CAATTTTACCCCTTCAGGGAACTGGGAAATGTATATTATGTCCTATaGTACGAGTATTCATGGGTTTGCTTGCTTGTTTGGTTTGTCCTT +
Preference number: 2 (lower is better)
Translates to: QFYPFRELGNVYYVL*YEYSWVCLLVWFVL
Trigger: AAGGACAAACCAAACAAGCAAGCAAACCCATGAATACTCGTACAATAGGACATAATATACATTTCCCAGTTCCCTGAAGGGGTAAAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR-3UTR TCA 90 bp AATGATGACTTAAGTACATTTGCTTTACAGGGGAACCGCAACCATAGCCAAAAGTATACAGTGGTATCTTaGGAGCTATGTTGCAAGATT +
Preference number: 2 (lower is better)
Translates to: NDDLSTFALQGNRNHSQKYTVVS*ELCCKI
Trigger: AATCTTGCAACATAGCTCTCAAGATACCACTGTATA...CTTTTGGCTATGGTTGCGGTTCCCCTGTAAAGCAAATGTACTTAAGTCATCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR TCA 90 bp TTTCCAAAGTCCAGCAGTAGGGTAAATCAGCTTTACAGCCTATTATACCTTAATGAGAGGAAGTTGGTGTaGTTTCAACTTGAATACACC +
Preference number: 2 (lower is better)
Translates to: FPKSSSRVNQLYSLLYLNERKLV*FQLEYT
Trigger: GGTGTATTCAAGTTGAAATCACACCAACTTCCTCTC...ATTAAGGTATAATAGGCTGTAAAGCTGATTTACCCTACTGCTGGACTTTGGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR TCA 90 bp AGGGTTCCTATTAAGTTAATACAATATCAAGTTTCACTGCCCGATTGCCTTACAGAGAGGAAGTTGGTGTaGTTTCAACTTGAATACACC +
Preference number: 2 (lower is better)
Translates to: RVPIKLIQYQVSLPDCLTERKLV*FQLEYT
Trigger: GGTGTATTCAAGTTGAAATCACACCAACTTCCTCTC...TGTAAGGCAATCGGGCAGTGAAACTTGATATTGTATTAACTTAATAGGAACCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CCA 90 bp AAGAGAGAAGCTCAAGATTCTCACTTTGGGCTCTCTGAGTTTGTTTTCGAGCAAAATTCTGTATTTCCTTaGAGTGCAGTTATAAAGTGC +
Preference number: 2 (lower is better)
Translates to: KREAQDSHFGLSEFVFEQNSVFP*SAVIKC
Trigger: GCACTTTATAACTGCACTCCAAGGAAATACAGAATT...TTGCTCGAAAACAAACTCAGAGAGCCCAAAGTGAGAATCTTGAGCTTCTCTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409923.5
ENST00000440481.6
3UTR-3UTR CCA 90 bp CCACTGACTTGTTCAAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAAGTTCTTTCCTATACTTaGCTTGTTACTACAATTGTG +
Preference number: 2 (lower is better)
Translates to: PLTCSKDLLNTVAAVLAKVLSYT*LVTTIV
Trigger: CACAATTGTAGTAACAAGCCAAGTATAGGAAAGAAC...TTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTTGAACAAGTCAGTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CCA 90 bp CACCTCCACAGAGGATTTGTTTATTACCAAGCACTTAGGGGATCATTTTTAATCACAAAATCACCACTCTaGTTCTCTACAAGTACCCTT +
Preference number: 2 (lower is better)
Translates to: HLHRGFVYYQALRGSFLITKSPL*FSTSTL
Trigger: AAGGGTACTTGTAGAGAACCAGAGTGGTGATTTTGT...GATTAAAAATGATCCCCTAAGTGCTTGGTAATAAACAAATCCTCTGTGGAGGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR-3UTR CCA 90 bp CCAGATTTGGCAAATTCCATAATGGAAGAAGTAGCTGCAGAATGTCTGCTCACTAGGTCATCTGATATTTaGGAAGTTCAACAAGGATTT +
Preference number: 2 (lower is better)
Translates to: PDLANSIMEEVAAECLLTRSSDI*EVQQGF
Trigger: AAATCCTTGTTGAACTTCCCAAATATCAGATGACCT...AGTGAGCAGACATTCTGCAGCTACTTCTTCCATTATGGAATTTGCCAAATCTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR-3UTR CCA 90 bp CCTGGAATAAAATCCCTCGTCAACTTCAGATATCTCCATCAGTTCTTCTTGACCTATTCGAGAGGAAGTTaGTGTGATTTCAACTTGAAT +
Preference number: 2 (lower is better)
Translates to: PGIKSLVNFRYLHQFFLTYSRGS*CDFNLN
Trigger: ATTCAAGTTGAAATCACACCAACTTCCTCTCGAATA...GGTCAAGAAGAACTGATGGAGATATCTGAAGTTGACGAGGGATTTTATTCCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CCA 90 bp TCAAAGAGAGAAGCTCAAGATTCTCACTTTGGGCTCTCTGAGTTTGTTTTCGAGTATTCGAGAGGAAGTTaGTGTGATTTCAACTTGAAT +
Preference number: 2 (lower is better)
Translates to: SKREAQDSHFGLSEFVFEYSRGS*CDFNLN
Trigger: ATTCAAGTTGAAATCACACCAACTTCCTCTCGAATA...CTCGAAAACAAACTCAGAGAGCCCAAAGTGAGAATCTTGAGCTTCTCTCTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR TCA 90 bp AAATGTTTCAGAGATAACAACAGAAATGCCTCTAGCCATCCCCTGGAATCATATCATTTTCCAGGGCTTTaGGCAAATTGTTCTAATCAT +
Preference number: 2 (lower is better)
Translates to: KCFRDNNRNASSHPLESYHFPGL*ANCSNH
Trigger: ATGATTAGAACAATTTGCTCAAAGCCCTGGAAAATG...ATATGATTCCAGGGGATGGCTAGAGGCATTTCTGTTGTTATCTCTGAAACATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
3UTR-3UTR CCA 90 bp AAATGTTTCAGAGATAACAACAGAAATGCCTCTAGCCATCCCCTGGAATCATATATAAGCTTTTCTTCTTaGAGACTACAAGCGGAAAAC +
Preference number: 2 (lower is better)
Translates to: KCFRDNNRNASSHPLESYISFSS*RLQAEN
Trigger: GTTTTCCGCTTGTAGTCTCCAAGAAGAAAAGCTTAT...ATATGATTCCAGGGGATGGCTAGAGGCATTTCTGTTGTTATCTCTGAAACATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CCA 90 bp TTGCTTTTTCAAAACAAACTTCAGGCATCATTTAAATGCCGAGAATTCCAACTCAGATCCTCTGAAATATaGGGTGCAAGACCCCAATTT +
Preference number: 2 (lower is better)
Translates to: LLFQNKLQASFKCREFQLRSSEI*GARPQF
Trigger: AAATTGGGGTCTTGCACCCCATATTTCAGAGGATCT...GAGTTGGAATTCTCGGCATTTAAATGATGCCTGAAGTTTGTTTTGAAAAAGCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CCA 90 bp TTAACAGTAACTCTCTTCTTGGGCCTTTTACCCAGATTTGGCAAATTCCATAATTTATCAGTTAGGGAATaGTGGGAACATTCCGGTAAT +
Preference number: 2 (lower is better)
Translates to: LTVTLFLGLLPRFGKFHNLSVRE*WEHSGN
Trigger: ATTACCGGAATGTTCCCACCATTCCCTAACTGATAA...ATTATGGAATTTGCCAAATCTGGGTAAAAGGCCCAAGAAGAGAGTTACTGTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR-3UTR TCA 90 bp TTTCCAAAGTCCAGCAGTAGGGTAAATCAGCTTTACAGCCTATTATACCTTAATCATTTTCCAGGGCTTTaGGCAAATTGTTCTAATCAT +
Preference number: 2 (lower is better)
Translates to: FPKSSSRVNQLYSLLYLNHFPGL*ANCSNH
Trigger: ATGATTAGAACAATTTGCTCAAAGCCCTGGAAAATG...ATTAAGGTATAATAGGCTGTAAAGCTGATTTACCCTACTGCTGGACTTTGGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
3UTR-3UTR CCA 90 bp AGGGTTCCTATTAAGTTAATACAATATCAAGTTTCACTGCCCGATTGCCTTACATATTCGAGAGGAAGTTaGTGTGATTTCAACTTGAAT +
Preference number: 2 (lower is better)
Translates to: RVPIKLIQYQVSLPDCLTYSRGS*CDFNLN
Trigger: ATTCAAGTTGAAATCACACCAACTTCCTCTCGAATA...TGTAAGGCAATCGGGCAGTGAAACTTGATATTGTATTAACTTAATAGGAACCCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000681237.1
ENST00000681402.1
3UTR TCA 72 bp ATTGGCATCTGTCCCAGCCCCACAACCAACAGCAGATaGCGGGTTATGTGGGACTGTGACACCACTGACTTG +
Preference number: 3 (lower is better)
Translates to: IGICPSPTTNSR*RVMWDCDTTDL
Trigger: CAAGTCAGTGGTGTCACAGTCCCACATAACCCGTCATCTGCTGTTGGTTGTGGGGCTGGGACAGATGCCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR TCA 72 bp GGAGTCCCCAAGACCACGCCAGCACCCCAGGTTCAGTaGTTCAACAGAAGCACTCACAAGGCTCAGCATATA +
Preference number: 3 (lower is better)
Translates to: GVPKTTPAPQVQ*FNRSTHKAQHI
Trigger: TATATGCTGAGCCTTGTGAGTGCTTCTGTTGAATCACTGAACCTGGGGTGCTGGCGTGGTCTTGGGGACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR-3UTR CAA 90 bp TCTTGGAGACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAACCACAAGCGGAAAACCTATaGGCATCTGTCCCAGCCCCA +
Preference number: 3 (lower is better)
Translates to: SWRLQAENLLASVPAPQPQAENL*ASVPAP
Trigger: TGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTG...TGGTTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTCTCCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CAA 90 bp TCTTCTTGGAGACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAACAAGCGGAAAACCTATaGGCATCTGTCCCAGCCCCA +
Preference number: 3 (lower is better)
Translates to: SSWRLQAENLLASVPAPQQAENL*ASVPAP
Trigger: TGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTG...TTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTCTCCAAGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CAA 90 bp AACAGTTCCCATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCAGAGAATTCCTGGAGTaGTGCCTCTGCCCCATTCTC +
Preference number: 3 (lower is better)
Translates to: NSSHTCRLPLTLKAKHTAREFLE*CLCPIL
Trigger: GAGAATGGGGCAGAGGCACAACTCCAGGAATTCTCT...GGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATGGGAACTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
3UTR-3UTR CAA 90 bp TCCTGGGCTCGAGTGAACCTCCTGAGTAGTTGGGACTACTACTCACCACACATGTGCAAGACCCCAATTTaGTGTGGAATCCTTCTCATG +
Preference number: 3 (lower is better)
Translates to: SWARVNLLSSWDYYSPHMCKTPI*CGILLM
Trigger: CATGAGAAGGATTCCACACAAAATTGGGGTCTTGCA...CATGTGTGGTGAGTAGTAGTCCCAACTACTCAGGAGGTTCACTCGAGCCCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR TCA 72 bp GGTGCATGGCCCATAGAGCTCATCTTCATCTTTGGATaGATACGAGTGGACCTGTCATACTCCTCAGCCCTA +
Preference number: 3 (lower is better)
Translates to: GAWPIELIFIFG*IRVDLSYSSAL
Trigger: TAGGGCTGAGGAGTATGACAGGTCCACTCGTATTCATCCAAAGATGAAGATGAGCTCTATGGGCCATGCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR CCA 72 bp CACTGGTGCATGGCCCATAGAGCTCATCTTCATCTTTaGATGAATACGAGTGGACCTGTCATACTCCTCAGC +
Preference number: 3 (lower is better)
Translates to: HWCMAHRAHLHL*MNTSGPVILLS
Trigger: GCTGAGGAGTATGACAGGTCCACTCGTATTCATCCAAAGATGAAGATGAGCTCTATGGGCCATGCACCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR CCA 72 bp AACCATGCTGGGATAGTGCACTCTCAGTCAGAGCCATaGACCCAATGCTGGAAGGTTCATGGTATACAGATG +
Preference number: 3 (lower is better)
Translates to: NHAGIVHSQSEP*TQCWKVHGIQM
Trigger: CATCTGTATACCATGAACCTTCCAGCATTGGGTCCATGGCTCTGACTGAGAGTGCACTATCCCAGCATGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CAA 90 bp TTGGAGACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAACCAACACCTATGACCCCTTATaGACATGCTGGTTACTGCAT +
Preference number: 3 (lower is better)
Translates to: LETTSGKPIGICPSPTTNTYDPL*TCWLLH
Trigger: ATGCAGTAACCAGCATGTCAATAAGGGGTCATAGGT...GTTGGTTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTCTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR CCA 72 bp TCAGATTGGCTTCCTGACCAGGAGCTAGAGAATTCCTaGAGTTGTGCCTCTGCCCCATTCTCTATAAAACAG +
Preference number: 3 (lower is better)
Translates to: SDWLPDQELENS*SCASAPFSIKQ
Trigger: CTGTTTTATAGAGAATGGGGCAGAGGCACAACTCCAGGAATTCTCTAGCTCCTGGTCAGGAAGCCAATCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
3UTR-3UTR CAA 90 bp TCTTCTTGGAGACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAATTGGGCTCTCTGAGTTaGTTTTCGAGCAAAGTGATC +
Preference number: 3 (lower is better)
Translates to: SSWRLQAENLLASVPAPQLGSLS*FSSKVI
Trigger: GATCACTTTGCTCGAAAACAAACTCAGAGAGCCCAA...TTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTCTCCAAGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CAA 90 bp AACCGCTGTGCAGTCACAGTGAAAAAGAGCCAAGAACTGGACAGCTCCTTAGGTTTGGGCTCTCTGAGTTaGTTTTCGAGCAAAGTGATC +
Preference number: 3 (lower is better)
Translates to: NRCAVTVKKSQELDSSLGLGSLS*FSSKVI
Trigger: GATCACTTTGCTCGAAAACAAACTCAGAGAGCCCAA...ACCTAAGGAGCTGTCCAGTTCTTGGCTCTTTTTCACTGTGACTGCACAGCGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000440481.6
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CAA 90 bp TTCAAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTCAAGCGGAAAACCTATaGGCATCTGTCCCAGCCCCA +
Preference number: 3 (lower is better)
Translates to: FKGFTKYSRCGLSQTMATQAENL*ASVPAP
Trigger: TGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTG...AGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CAA 90 bp ACAAGATACCAGATAATGCCAATCCTACTTACTGGTCCTCAGACCACACAGCTAAGAGAATTCCTGGAGTaGTGCCTCTGCCCCATTCTC +
Preference number: 3 (lower is better)
Translates to: TRYQIMPILLTGPQTTQLREFLE*CLCPIL
Trigger: GAGAATGGGGCAGAGGCACAACTCCAGGAATTCTCT...TAGCTGTGTGGTCTGAGGACCAGTAAGTAGGATTGGCATTATCTGGTATCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CAA 90 bp TCCTTAGGTCTTCCTCAACGGTCAACTGACTCAGCCTCAGCCGTGCTTTCTCTCACCTGTCAAAATTTATaGTCACTGACAATCTTAGGG +
Preference number: 3 (lower is better)
Translates to: SLGLPQRSTDSASAVLSLTCQNL*SLTILG
Trigger: CCCTAAGATTGTCAGTGACAATAAATTTTGACAGGT...GAGAGAAAGCACGGCTGAGGCTGAGTCAGTTGACCGTTGAGGAAGACCTAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CAA 90 bp ACAAGATACCAGATAATGCCAATCCTACTTACTGGTCCTCAGACCACACAGCTAACATGCAGACTCCCTTaGACTCTGAAGGCCAAACAC +
Preference number: 3 (lower is better)
Translates to: TRYQIMPILLTGPQTTQLTCRLP*TLKAKH
Trigger: GTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGT...TAGCTGTGTGGTCTGAGGACCAGTAAGTAGGATTGGCATTATCTGGTATCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CAA 90 bp TCCTGGGCTCGAGTGAACCTCCTGAGTAGTTGGGACTACTACTCACCACACATGTTATACAGTGGTATCTaGAGAGCTATGTTGCAAGAT +
Preference number: 3 (lower is better)
Translates to: SWARVNLLSSWDYYSPHMLYSGI*RAMLQD
Trigger: ATCTTGCAACATAGCTCTCAAGATACCACTGTATAA...CATGTGTGGTGAGTAGTAGTCCCAACTACTCAGGAGGTTCACTCGAGCCCAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR-3UTR CAA 90 bp TCCTTAGGTCTTCCTCAACGGTCAACTGACTCAGCCTCAGCCGTGCTTTCTCTCTTATACAGTGGTATCTaGAGAGCTATGTTGCAAGAT +
Preference number: 3 (lower is better)
Translates to: SLGLPQRSTDSASAVLSLLYSGI*RAMLQD
Trigger: ATCTTGCAACATAGCTCTCAAGATACCACTGTATAA...GAGAGAAAGCACGGCTGAGGCTGAGTCAGTTGACCGTTGAGGAAGACCTAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CAA 90 bp CTTCTTGGAGACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAACTGGTGTGATTTCAACTaGAATACACCTTGTACCTTC +
Preference number: 3 (lower is better)
Translates to: LLGDYKRKTYWHLSQPHNWCDFN*NTPCTF
Trigger: GAAGGTACAAGGTGTATTCAAGTTGAAATCACACCA...GTTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTCTCCAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CAA 90 bp CTTGGAGACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAACCAATGGTTACTGCATTTCTaGATATTCGAGAGGAAGTTG +
Preference number: 3 (lower is better)
Translates to: LGDYKRKTYWHLSQPHNQWLLHF*IFERKL
Trigger: CAACTTCCTCTCGAATATCAAGAAATGCAGTAACCA...TTGGTTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTCTCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CAA 90 bp TCCTTAGGTCTTCCTCAACGGTCAACTGACTCAGCCTCAGCCGTGCTTTCTCTCTTGGTATGTCCCTGTTaGTCAACTATTTCCAAATTG +
Preference number: 3 (lower is better)
Translates to: SLGLPQRSTDSASAVLSLLVCPC*STISKL
Trigger: CAATTTGGAAATAGTTGACAAACAGGGACATACCAA...GAGAGAAAGCACGGCTGAGGCTGAGTCAGTTGACCGTTGAGGAAGACCTAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681402.1
3UTR TCA 72 bp CAGGAACAAGAGGAAAACACTAGCATGCTCTCTTGGTaGCTACAGCAAGGGACTATGAAGAAGGAAACCGCT +
Preference number: 3 (lower is better)
Translates to: QEQEENTSMLSW*LQQGTMKKETA
Trigger: AGCGGTTTCCTTCTTCATAGTCCCTTGCTGTAGTCACCAAGAGAGCATGCTAGTGTTTTCCTCTTGTTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
3UTR TCA 72 bp AGCCCAAAGCATGGGAATTTCCTAAGCCCTCTTTTATaGCTTGGCAGGCACTGGCATTCAGTTTTTGTCCTC +
Preference number: 3 (lower is better)
Translates to: SPKHGNFLSPLL*LGRHWHSVFVL
Trigger: GAGGACAAAAACTGAATGCCAGTGCCTGCCAAGTCATAAAAGAGGGCTTAGGAAATTCCCATGCTTTGGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR TCA 72 bp AAGAGGAAAACAAGGAAAGTGCCAGGCTCACTTCTCTaGACTTCCTGTCTTACTAGGATCTCTGCTCTCCCA +
Preference number: 3 (lower is better)
Translates to: KRKTRKVPGSLL*TSCLTRISALP
Trigger: TGGGAGAGCAGAGATCCTAGTAAGACAGGAAGTTCAGAGAAGTGAGCCTGGCACTTTCCTTGTTTTCCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR CCA 72 bp TTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATaGCTACTAGGCTTAGGTAGGGATTGGCTGGTTGTT +
Preference number: 3 (lower is better)
Translates to: LLNTVAAVLAKP*LLGLGRDWLVV
Trigger: AACAACCAGCCAATCCCTACCTAAGCCTAGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR CCA 72 bp CAGGAAGGGAAGGGAAGACATTTGCCCTGGGTAGTCTaGGACAGTCCCTTGAAAAGTCTATTTTTGTTTCTC +
Preference number: 3 (lower is better)
Translates to: QEGKGRHLPWVV*DSPLKSLFLFL
Trigger: GAGAAACAAAAATAGACTTTTCAAGGGACTGTCCCAGACTACCCAGGGCAAATGTCTTCCCTTCCCTTCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
3UTR CCA 72 bp CACCTGGCCAGGTATAAATGGTGTAGATCTGTATCTTaGGATGGCTCACTTTCGGTGCAAAGCAGACTAGAA +
Preference number: 3 (lower is better)
Translates to: HLARYKWCRSVS*DGSLSVQSRLE
Trigger: TTCTAGTCTGCTTTGCACCGAAAGTGAGCCATCCCAAGATACAGATCTACACCATTTATACCTGGCCAGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR CCA 72 bp TACGTCTGTGTTTCCAACCACCTGGCCAGGTATAAATaGTGTAGATCTGTATCTTGGGATGGCTCACTTTCG +
Preference number: 3 (lower is better)
Translates to: YVCVSNHLARYK*CRSVSWDGSLS
Trigger: CGAAAGTGAGCCATCCCAAGATACAGATCTACACCATTTATACCTGGCCAGGTGGTTGGAAACACAGACGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR-3UTR CAA 90 bp TTGGAGACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAACCAACGGTTCTTTCCTATACTaGGCTTGTTACTACAATTGT +
Preference number: 3 (lower is better)
Translates to: LETTSGKPIGICPSPTTNGSFLY*ACYYNC
Trigger: ACAATTGTAGTAACAAGCCAAGTATAGGAAAGAACC...GTTGGTTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTCTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CAA 90 bp GGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTAGGCTTTTGGGCTCTCTGAGTTaGTTTTCGAGCAAAGTGATC +
Preference number: 3 (lower is better)
Translates to: GFTKYSRCGLSQTMATRLLGSLS*FSSKVI
Trigger: GATCACTTTGCTCGAAAACAAACTCAGAGAGCCCAA...AAGCCTAGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CAA 90 bp TCTTGGAGACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAACCATGTGACACCACTGACTaGTTCAAAGGATTTACTAAA +
Preference number: 3 (lower is better)
Translates to: SWRLQAENLLASVPAPQPCDTTD*FKGFTK
Trigger: TTTAGTAAATCCTTTGAACAAGTCAGTGGTGTCACA...TGGTTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTCTCCAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CAA 90 bp TCTTCTTGGAGACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAACTGATTGATGCTTCATaGGAAGTTCAGTTCTTTCTG +
Preference number: 3 (lower is better)
Translates to: SSWRLQAENLLASVPAPQLIDAS*EVQFFL
Trigger: CAGAAAGAACTGAACTTCCAATGAAGCATCAATCAG...TTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTCTCCAAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CAA 90 bp GATCTCTCAGCTCTGTCAGCTAACATTTCCCCAAACTTATTCTACAATGTTTCCAGAGAATTCCTGGAGTaGTGCCTCTGCCCCATTCTC +
Preference number: 3 (lower is better)
Translates to: DLSALSANISPNLFYNVSREFLE*CLCPIL
Trigger: GAGAATGGGGCAGAGGCACAACTCCAGGAATTCTCT...GGAAACATTGTAGAATAAGTTTGGGGAAATGTTAGCTGACAGAGCTGAGAGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
3UTR TCA 72 bp ATAAGGACAGCCTTGATGAAAGGAGGCCTGTATTGTTaGAGTTCCTGTGTAGCCCTATCCTTCCAGTATAGC +
Preference number: 3 (lower is better)
Translates to: IRTALMKGGLYC*SSCVALSFQYS
Trigger: GCTATACTGGAAGGATAGGGCTACACAGGAACTTCAACAATACAGGCCTCCTTTCATCAAGGCTGTCCTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR TCA 72 bp TCTGATTTCAGGAATTGGGATGGTTTGAATCCGTGCTaGATTCCCTGTGTATGGGGGAGAGTTGATGCACTT +
Preference number: 3 (lower is better)
Translates to: SDFRNWDGLNPC*IPCVWGRVDAL
Trigger: AAGTGCATCAACTCTCCCCCATACACAGGGAATTCAGCACGGATTCAAACCATCCCAATTCCTGAAATCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR CCA 72 bp TCAAATTCCTGGGCTCGAGTGAACCTCCTGAGTAGTTaGGACTACTACTCACCACACATGGCAATAAAGATT +
Preference number: 3 (lower is better)
Translates to: SNSWARVNLLSS*DYYSPHMAIKI
Trigger: AATCTTTATTGCCATGTGTGGTGAGTAGTAGTCCCAACTACTCAGGAGGTTCACTCGAGCCCAGGAATTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR CCA 72 bp TTGAAGACAATTCCTACAGGTGAAGCCCTGCTCACCTaGGCAAACAGCTTGTTTCTCAAACAACAGTTGACT +
Preference number: 3 (lower is better)
Translates to: LKTIPTGEALLT*ANSLFLKQQLT
Trigger: AGTCAACTGTTGTTTGAGAAACAAGCTGTTTGCCCAGGTGAGCAGGGCTTCACCTGTAGGAATTGTCTTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR-3UTR CAA 90 bp TTTGAGGATGAGGTCCACTGTATACCACTTTTGACAAACCATGCTGGGATAGTGAATTGTGACTACTGTTaGATAAACCCGACTGGCTGG +
Preference number: 3 (lower is better)
Translates to: FEDEVHCIPLLTNHAGIVNCDYC*INPTGW
Trigger: CCAGCCAGTCGGGTTTATCAAACAGTAGTCACAATT...CACTATCCCAGCATGGTTTGTCAAAAGTGGTATACAGTGGACCTCATCCTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CAA 90 bp CTCTCTCTCACTCTGAATGATGACTTAAGTACATTTGCTTTACAGGGGAACCGCAATTGTGACTACTGTTaGATAAACCCGACTGGCTGG +
Preference number: 3 (lower is better)
Translates to: LSLTLNDDLSTFALQGNRNCDYC*INPTGW
Trigger: CCAGCCAGTCGGGTTTATCAAACAGTAGTCACAATT...GCGGTTCCCCTGTAAAGCAAATGTACTTAAGTCATCATTCAGAGTGAGAGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440481.6
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CAA 90 bp AACCGCTGTGCAGTCACAGTGAAAAAGAGCCAAGAACTGGACAGCTCCTTAGGTTCATACACATCATTTTaGTGTTTCCACATGCCTGTT +
Preference number: 3 (lower is better)
Translates to: NRCAVTVKKSQELDSSLGSYTSF*CFHMPV
Trigger: AACAGGCATGTGGAAACACAAAAATGATGTGTATGA...ACCTAAGGAGCTGTCCAGTTCTTGGCTCTTTTTCACTGTGACTGCACAGCGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CAA 90 bp CCAGGAGCTAGAGAATTCCTGGAGTTGTGCCTCTGCCCCATTCTCTATAAAACATGGTGTGATTTCAACTaGAATACACCTTGTACCTTC +
Preference number: 3 (lower is better)
Translates to: PGAREFLELCLCPILYKTWCDFN*NTPCTF
Trigger: GAAGGTACAAGGTGTATTCAAGTTGAAATCACACCA...TGTTTTATAGAGAATGGGGCAGAGGCACAACTCCAGGAATTCTCTAGCTCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
3UTR GCA 72 bp ACTGACTTGTTCAAAGGATTTACTAAATACAGTCGCTaGGGTCTTAGCCAAACCATGGCTACTAGGCTTAGG +
Preference number: 3 (lower is better)
Translates to: TDLFKGFTKYSR*GLSQTMATRLR
Trigger: CCTAAGCCTAGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTTGAACAAGTCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR CCA 72 bp AAGTCACCAAAGATACATCAATTGTTGGAGCTCCAGTaGTACGATCAGTTAGCATGCCGTACTTATGACCTG +
Preference number: 3 (lower is better)
Translates to: KSPKIHQLLELQ*YDQLACRTYDL
Trigger: CAGGTCATAAGTACGGCATGCTAACTGATCGTACCACTGGAGCTCCAACAATTGATGTATCTTTGGTGACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR CCA 72 bp TCCTCCAATCTTATTACGTCTGTGTTTCCAACCACCTaGCCAGGTATAAATGGTGTAGATCTGTATCTTGGG +
Preference number: 3 (lower is better)
Translates to: SSNLITSVFPTT*PGINGVDLYLG
Trigger: CCCAAGATACAGATCTACACCATTTATACCTGGCCAGGTGGTTGGAAACACAGACGTAATAAGATTGGAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR-3UTR CAA 90 bp TCAAAGAGAGAAGCTCAAGATTCTCACTTTGGGCTCTCTGAGTTTGTTTTCGAGAATTGTGACTACTGTTaGATAAACCCGACTGGCTGG +
Preference number: 3 (lower is better)
Translates to: SKREAQDSHFGLSEFVFENCDYC*INPTGW
Trigger: CCAGCCAGTCGGGTTTATCAAACAGTAGTCACAATT...CTCGAAAACAAACTCAGAGAGCCCAAAGTGAGAATCTTGAGCTTCTCTCTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CAA 90 bp AAGAGAGAAGCTCAAGATTCTCACTTTGGGCTCTCTGAGTTTGTTTTCGAGCAATTGGGCTCTCTGAGTTaGTTTTCGAGCAAAGTGATC +
Preference number: 3 (lower is better)
Translates to: KREAQDSHFGLSEFVFEQLGSLS*FSSKVI
Trigger: GATCACTTTGCTCGAAAACAAACTCAGAGAGCCCAA...TTGCTCGAAAACAAACTCAGAGAGCCCAAAGTGAGAATCTTGAGCTTCTCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CAA 90 bp ATGTGGGACTGTGACACCACTGACTTGTTCAAAGGATTTACTAAATACAGTCGCTTGGGCTCTCTGAGTTaGTTTTCGAGCAAAGTGATC +
Preference number: 3 (lower is better)
Translates to: MWDCDTTDLFKGFTKYSRLGSLS*FSSKVI
Trigger: GATCACTTTGCTCGAAAACAAACTCAGAGAGCCCAA...GCGACTGTATTTAGTAAATCCTTTGAACAAGTCAGTGGTGTCACAGTCCCACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CAA 90 bp AAATGTTTCAGAGATAACAACAGAAATGCCTCTAGCCATCCCCTGGAATCATATACATGCAGACTCCCTTaGACTCTGAAGGCCAAACAC +
Preference number: 3 (lower is better)
Translates to: KCFRDNNRNASSHPLESYTCRLP*TLKAKH
Trigger: GTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGT...ATATGATTCCAGGGGATGGCTAGAGGCATTTCTGTTGTTATCTCTGAAACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
3UTR-3UTR CAA 90 bp AGGGTTCCTATTAAGTTAATACAATATCAAGTTTCACTGCCCGATTGCCTTACAAGAGAATTCCTGGAGTaGTGCCTCTGCCCCATTCTC +
Preference number: 3 (lower is better)
Translates to: RVPIKLIQYQVSLPDCLTREFLE*CLCPIL
Trigger: GAGAATGGGGCAGAGGCACAACTCCAGGAATTCTCT...TGTAAGGCAATCGGGCAGTGAAACTTGATATTGTATTAACTTAATAGGAACCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CAA 90 bp TCTGAGCTCTGCATAAGCAGGAACAAGAGGAAAACACTAGCATGCTCTCTTGGTCCTAAGCACCTCAACTaGCTTAAAATGCCAATCTTA +
Preference number: 3 (lower is better)
Translates to: SELCISRNKRKTLACSLGPKHLN*LKMPIL
Trigger: TAAGATTGGCATTTTAAGCAAGTTGAGGTGCTTAGG...ACCAAGAGAGCATGCTAGTGTTTTCCTCTTGTTCCTGCTTATGCAGAGCTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CAA 90 bp AAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTAGGCTGGTTACTGCATTTCTaGATATTCGAGAGGAAGTTG +
Preference number: 3 (lower is better)
Translates to: KDLLNTVAAVLAKPWLLGWLLHF*IFERKL
Trigger: CAACTTCCTCTCGAATATCAAGAAATGCAGTAACCA...GCCTAGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CAA 90 bp CCTGGAATAAAATCCCTCGTCAACTTCAGATATCTCCATCAGTTCTTCTTGACCACCTATGACCCCTTATaGACATGCTGGTTACTGCAT +
Preference number: 3 (lower is better)
Translates to: PGIKSLVNFRYLHQFFLTTYDPL*TCWLLH
Trigger: ATGCAGTAACCAGCATGTCAATAAGGGGTCATAGGT...GGTCAAGAAGAACTGATGGAGATATCTGAAGTTGACGAGGGATTTTATTCCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CAA 90 bp ACAGCAGATGACGGGTTATGTGGGACTGTGACACCACTGACTTGTTCAAAGGATTGGTATACAGATGGTTaGGATAAAGATGGAATCGTA +
Preference number: 3 (lower is better)
Translates to: TADDGLCGTVTPLTCSKDWYTDG*DKDGIV
Trigger: TACGATTCCATCTTTATCCAAACCATCTGTATACCA...ATCCTTTGAACAAGTCAGTGGTGTCACAGTCCCACATAACCCGTCATCTGCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CAA 90 bp GTGAGACCACTGGGAATTCTACATATTAGACGAGTAATTTGTTTGCACTCTGATTGTCAGCATCTCCCTTaGAGGATGAGGTCCACTGTA +
Preference number: 3 (lower is better)
Translates to: VRPLGILHIRRVICLHSDCQHLP*RMRSTV
Trigger: TACAGTGGACCTCATCCTCAAAGGGAGATGCTGACA...ATCAGAGTGCAAACAAATTACTCGTCTAATATGTAGAATTCCCAGTGGTCTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000681237.1
ENST00000681402.1
3UTR TCA 72 bp GTTATCTTGATATTAACAAAGTCGGGTTGTAGGAGGTaGGTCAGCTATGTGGACTACTGGAGTTACTGGAAG +
Preference number: 3 (lower is better)
Translates to: VILILTKSGCRR*VSYVDYWSYWK
Trigger: CTTCCAGTAACTCCAGTAGTCCACATAGCTGACTCACCTCCTACAACCCGACTTTGTTAATATCAAGATAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR TCA 72 bp AAAGTTCATTTCCTCACTGTCCTCCAGAACCATCTTTaGGTGAAGCTGAAACACTGTAGGCTATGTCTAGCT +
Preference number: 3 (lower is better)
Translates to: KVHFLTVLQNHL*VKLKHCRLCLA
Trigger: AGCTAGACATAGCCTACAGTGTTTCAGCTTCACTCAAAGATGGTTCTGGAGGACAGTGAGGAAATGAACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR TCA 72 bp ACCTTCCTTATTAGATTTCATGGGACCATGAGGCAATaGAGCCTTTATTGCATTAGCAACCAGCAATGGCTC +
Preference number: 3 (lower is better)
Translates to: TFLIRFHGTMRQ*SLYCISNQQWL
Trigger: GAGCCATTGCTGGTTGCTAATGCAATAAAGGCTTCATTGCCTCATGGTCCCATGAAATCTAATAAGGAAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000681237.1
ENST00000681402.1
3UTR CCA 72 bp TTAGCCAAACCATGGCTACTAGGCTTAGGTAGGGATTaGCTGGTTGTTAAAGTAAGTCTCTTCAAAGAGAGA +
Preference number: 3 (lower is better)
Translates to: LAKPWLLGLGRD*LVVKVSLFKER
Trigger: TCTCTCTTTGAAGAGACTTACTTTAACAACCAGCCAATCCCTACCTAAGCCTAGTAGCCATGGTTTGGCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR CCA 72 bp TTTAACAAGATACCAGATAATGCCAATCCTACTTACTaGTCCTCAGACCACACAGCTAGCAAAGGTCTAGAG +
Preference number: 3 (lower is better)
Translates to: FNKIPDNANPTY*SSDHTASKGLE
Trigger: CTCTAGACCTTTGCTAGCTGTGTGGTCTGAGGACCAGTAAGTAGGATTGGCATTATCTGGTATCTTGTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
3UTR CCA 72 bp ATGAAGCCACAATTTCTGTTCAGATCCTCTGAAATATaGGGTGCAAGACCCCAATTTTGTGTGGAATCCTTC +
Preference number: 3 (lower is better)
Translates to: MKPQFLFRSSEI*GARPQFCVESF
Trigger: GAAGGATTCCACACAAAATTGGGGTCTTGCACCCCATATTTCAGAGGATCTGAACAGAAATTGTGGCTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
3UTR CCA 72 bp AAAGCATGGGAATTTCCTAAGCCCTCTTTTATGACTTaGCAGGCACTGGCATTCAGTTTTTGTCCTCCTAAT +
Preference number: 3 (lower is better)
Translates to: KAWEFPKPSFMT*QALAFSFCPPN
Trigger: ATTAGGAGGACAAAAACTGAATGCCAGTGCCTGCCAAGTCATAAAAGAGGGCTTAGGAAATTCCCATGCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR CCA 72 bp TCCAAGAATCCTTTGCCTGTGGAATCACACAGGCTGTaGTTAATTACTTCAGTACTGAATTGTGACAACAGG +
Preference number: 3 (lower is better)
Translates to: SKNPLPVESHRL*LITSVLNCDNR
Trigger: CCTGTTGTCACAATTCAGTACTGAAGTAATTAACCACAGCCTGTGTGATTCCACAGGCAAAGGATTCTTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR-3UTR CAA 90 bp TCAGGGCTCCTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAAGAATGTGACACCACTGACTaGTTCAAAGGATTTACTAAA +
Preference number: 3 (lower is better)
Translates to: SGLLSGIRMKDPGYFHKECDTTD*FKGFTK
Trigger: TTTAGTAAATCCTTTGAACAAGTCAGTGGTGTCACA...TTCTTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAGGAGCCCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CAA 90 bp TCTGAGCTCTGCATAAGCAGGAACAAGAGGAAAACACTAGCATGCTCTCTTGGTTCATACACATCATTTTaGTGTTTCCACATGCCTGTT +
Preference number: 3 (lower is better)
Translates to: SELCISRNKRKTLACSLGSYTSF*CFHMPV
Trigger: AACAGGCATGTGGAAACACAAAAATGATGTGTATGA...ACCAAGAGAGCATGCTAGTGTTTTCCTCTTGTTCCTGCTTATGCAGAGCTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CAA 90 bp TCGGTGCAAAGCAGACTAGAAATACTGCTCATATTTATTCTCGCTGGAAAAAGTCCAGGAATGAGGTCATaGTCTTATCACTTACCCCCA +
Preference number: 3 (lower is better)
Translates to: SVQSRLEILLIFILAGKSPGMRS*SYHLPP
Trigger: TGGGGGTAAGTGATAAGACAATGACCTCATTCCTGG...ACTTTTTCCAGCGAGAATAAATATGAGCAGTATTTCTAGTCTGCTTTGCACCGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR-3UTR CAA 90 bp CAAGAATTCAGCAAATACTCAAGAGGAAAACAAGGAAAGTGCCAGGCTCACTTCTGCCCAAAGTTTGTATaGGAAGTTAGTGATAGAGGC +
Preference number: 3 (lower is better)
Translates to: QEFSKYSRGKQGKCQAHFCPKFV*EVSDRG
Trigger: GCCTCTATCACTAACTTCCAATACAAACTTTGGGCA...GAAGTGAGCCTGGCACTTTCCTTGTTTTCCTCTTGAGTATTTGCTGAATTCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR-3UTR CAA 90 bp CTGACTTGTTCAAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCACACTGTATACCACTTTaGACAAACCATGCTGGGATA +
Preference number: 3 (lower is better)
Translates to: LTCSKDLLNTVAAVLAKPHCIPL*TNHAGI
Trigger: TATCCCAGCATGGTTTGTCAAAAGTGGTATACAGTG...TGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTTGAACAAGTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CAA 90 bp ATTTCCATAGTGGTATACAAAGGACTCCAGGGTGCTTTCCTGTGGCTTCAGGAACACAAACACAGATTCTaGAACAAATTTGACACAGTG +
Preference number: 3 (lower is better)
Translates to: ISIVVYKGLQGAFLWLQEHKHRF*NKFDTV
Trigger: CACTGTGTCAAATTTGTTCAAGAATCTGTGTTTGTG...TTCCTGAAGCCACAGGAAAGCACCCTGGAGTCCTTTGTATACCACTATGGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CAA 90 bp TCTGAGCTCTGCATAAGCAGGAACAAGAGGAAAACACTAGCATGCTCTCTTGGTGTAAAACTCAATACTTaGGTATGTCCCTGTTTGTCA +
Preference number: 3 (lower is better)
Translates to: SELCISRNKRKTLACSLGVKLNT*VCPCLS
Trigger: TGACAAACAGGGACATACCAAAGTATTGAGTTTTAC...ACCAAGAGAGCATGCTAGTGTTTTCCTCTTGTTCCTGCTTATGCAGAGCTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681402.1
3UTR TCA 72 bp AGTGGTATCTTGAGAGCTATGTTGCAAGATTTACACTaGTTTCCAGGAAGTCTTCCAATGACGTATGCTCTG +
Preference number: 3 (lower is better)
Translates to: SGILRAMLQDLH*FPGSLPMTYAL
Trigger: CAGAGCATACGTCATTGGAAGACTTCCTGGAAATCAGTGTAAATCTTGCAACATAGCTCTCAAGATACCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
3UTR TCA 72 bp GACCACACAGCTAGCAAAGGTCTAGAGAGGTCTAAATaGGGTTCCATTACAGTGATAGAACATGAAAATCTG +
Preference number: 3 (lower is better)
Translates to: DHTASKGLERSK*GSITVIEHENL
Trigger: CAGATTTTCATGTTCTATCACTGTAATGGAACCTCATTTAGACCTCTCTAGACCTTTGCTAGCTGTGTGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
3UTR TCA 72 bp CTATCAACTTTGCTAATCCCAATCAGTTCCCTGCCTTaGCAGACATACCTTAAACCATTTGAGCATAGATCC +
Preference number: 3 (lower is better)
Translates to: LSTLLIPISSLP*QTYLKPFEHRS
Trigger: GGATCTATGCTCAAATGGTTTAAGGTATGTCTGTCAAGGCAGGGAACTGATTGGGATTAGCAAAGTTGATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR TCA 72 bp ATCATTTTTAATCTGATTTCAGGAATTGGGATGGTTTaGATCCGTGCTGAATTCCCTGTGTATGGGGGAGAG +
Preference number: 3 (lower is better)
Translates to: IIFNLISGIGMV*IRAEFPVYGGE
Trigger: CTCTCCCCCATACACAGGGAATTCAGCACGGATTCAAACCATCCCAATTCCTGAAATCAGATTAAAAATGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR GCA 72 bp CAATTGTTGGAGCTCCAGTGGTACGATCAGTTAGCATaGCGTACTTATGACCTGTCAATTGCTATATACATA +
Preference number: 3 (lower is better)
Translates to: QLLELQWYDQLA*RTYDLSIAIYI
Trigger: TATGTATATAGCAATTGACAGGTCATAAGTACGGCATGCTAACTGATCGTACCACTGGAGCTCCAACAATTG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR GCA 72 bp CACTGTAGGCTATGTCTAGCTAGTATCAGCATGCTGTaGAATACTGCTTGTATAACCAGTCTCAATTTTACC +
Preference number: 3 (lower is better)
Translates to: HCRLCLASISML*NTACITSLNFT
Trigger: GGTAAAATTGAGACTGGTTATACAAGCAGTATTGCACAGCATGCTGATACTAGCTAGACATAGCCTACAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR GCA 72 bp TTCCATGTCTTTTCCACCTATGACCCCTTATTGACATaGTGGTTACTGCATTTCTTGATATTCGAGAGGAAG +
Preference number: 3 (lower is better)
Translates to: FHVFSTYDPLLT*WLLHFLIFERK
Trigger: CTTCCTCTCGAATATCAAGAAATGCAGTAACCAGCATGTCAATAAGGGGTCATAGGTGGAAAAGACATGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR CCA 72 bp CATGTCTTTTCCACCTATGACCCCTTATTGACATGCTaGTTACTGCATTTCTTGATATTCGAGAGGAAGTTG +
Preference number: 3 (lower is better)
Translates to: HVFSTYDPLLTC*LLHFLIFERKL
Trigger: CAACTTCCTCTCGAATATCAAGAAATGCAGTAACCAGCATGTCAATAAGGGGTCATAGGTGGAAAAGACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CAA 90 bp GATGACGGGTTATGTGGGACTGTGACACCACTGACTTGTTCAAAGGATTTACTAGGTTCTTTCCTATACTaGGCTTGTTACTACAATTGT +
Preference number: 3 (lower is better)
Translates to: DDGLCGTVTPLTCSKDLLGSFLY*ACYYNC
Trigger: ACAATTGTAGTAACAAGCCAAGTATAGGAAAGAACC...TAGTAAATCCTTTGAACAAGTCAGTGGTGTCACAGTCCCACATAACCCGTCATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CAA 90 bp GGAATGAGGTCATTGTCTTATCACTTACCCCCAAAAGCTCTCAATGGCTCAACTACCTGTCAAAATTTATaGTCACTGACAATCTTAGGG +
Preference number: 3 (lower is better)
Translates to: GMRSLSYHLPPKALNGSTTCQNL*SLTILG
Trigger: CCCTAAGATTGTCAGTGACAATAAATTTTGACAGGT...AGTTGAGCCATTGAGAGCTTTTGGGGGTAAGTGATAAGACAATGACCTCATTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR-3UTR CAA 90 bp CATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAAATAACCTGTCAAAATTTATaGTCACTGACAATCTTAGGG +
Preference number: 3 (lower is better)
Translates to: HTCRLPLTLKAKHTAIKITCQNL*SLTILG
Trigger: CCCTAAGATTGTCAGTGACAATAAATTTTGACAGGT...TATTTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
3UTR-3UTR CAA 90 bp CCTGGAATAAAATCCCTCGTCAACTTCAGATATCTCCATCAGTTCTTCTTGACCTGGTGTGATTTCAACTaGAATACACCTTGTACCTTC +
Preference number: 3 (lower is better)
Translates to: PGIKSLVNFRYLHQFFLTWCDFN*NTPCTF
Trigger: GAAGGTACAAGGTGTATTCAAGTTGAAATCACACCA...GGTCAAGAAGAACTGATGGAGATATCTGAAGTTGACGAGGGATTTTATTCCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CAA 90 bp ATAAAACAGTTCCCATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACTGGTATACAGATGGTTaGGATAAAGATGGAATCGTA +
Preference number: 3 (lower is better)
Translates to: IKQFPYMQTPFDSEGQTHWYTDG*DKDGIV
Trigger: TACGATTCCATCTTTATCCAAACCATCTGTATACCA...GTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATGGGAACTGTTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CAA 90 bp TTTCCAAAGTCCAGCAGTAGGGTAAATCAGCTTTACAGCCTATTATACCTTAATTTGGGCTCTCTGAGTTaGTTTTCGAGCAAAGTGATC +
Preference number: 3 (lower is better)
Translates to: FPKSSSRVNQLYSLLYLNLGSLS*FSSKVI
Trigger: GATCACTTTGCTCGAAAACAAACTCAGAGAGCCCAA...ATTAAGGTATAATAGGCTGTAAAGCTGATTTACCCTACTGCTGGACTTTGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
3UTR CCA 72 bp AAGCAGACTAGAAATACTGCTCATATTTATTCTCGCTaGAAAAAGTTCATTTCCTCACTGTCCTCCAGAACC +
Preference number: 3 (lower is better)
Translates to: KQTRNTAHIYSR*KKFISSLSSRT
Trigger: GGTTCTGGAGGACAGTGAGGAAATGAACTTTTTCCAGCGAGAATAAATATGAGCAGTATTTCTAGTCTGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR-3UTR CAA 90 bp GATCTCTCAGCTCTGTCAGCTAACATTTCCCCAAACTTATTCTACAATGTTTCCTCATACACATCATTTTaGTGTTTCCACATGCCTGTT +
Preference number: 3 (lower is better)
Translates to: DLSALSANISPNLFYNVSSYTSF*CFHMPV
Trigger: AACAGGCATGTGGAAACACAAAAATGATGTGTATGA...GGAAACATTGTAGAATAAGTTTGGGGAAATGTTAGCTGACAGAGCTGAGAGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CAA 90 bp ATTCTGTATTTCCATGTCTTTTCCACCTATGACCCCTTATTGACATGCTGGTTATGGTGTGATTTCAACTaGAATACACCTTGTACCTTC +
Preference number: 3 (lower is better)
Translates to: ILYFHVFSTYDPLLTCWLWCDFN*NTPCTF
Trigger: GAAGGTACAAGGTGTATTCAAGTTGAAATCACACCA...TAACCAGCATGTCAATAAGGGGTCATAGGTGGAAAAGACATGGAAATACAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR TCA 72 bp TGGCAGCCTTCAAAGCATACAAATTTTTCATATATCTaGGCTCTGCATAAGCAGGAACAAGAGGAAAACACT +
Preference number: 3 (lower is better)
Translates to: WQPSKHTNFSYI*ALHKQEQEENT
Trigger: AGTGTTTTCCTCTTGTTCCTGCTTATGCAGAGCTCAGATATATGAAAAATTTGTATGCTTTGAAGGCTGCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
3UTR TCA 72 bp GCTCCAGTGGTACGATCAGTTAGCATGCCGTACTTATaGCCTGTCAATTGCTATATACATAATATTGACTTA +
Preference number: 3 (lower is better)
Translates to: APVVRSVSMPYL*PVNCYIHNIDL
Trigger: TAAGTCAATATTATGTATATAGCAATTGACAGGTCATAAGTACGGCATGCTAACTGATCGTACCACTGGAGC
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR TCA 72 bp TACCAAAGAGATTTACTGATATCCTCAAAGTCATCTTaGCCATCTGATTATTTAGCACCTCCTTCACCACAG +
Preference number: 3 (lower is better)
Translates to: YQRDLLISSKSS*PSDYLAPPSPQ
Trigger: CTGTGGTGAAGGAGGTGCTAAATAATCAGATGGTCAAGATGACTTTGAGGATATCAGTAAATCTCTTTGGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR-3UTR CAA 90 bp GCAAGATTTACACTGATTTCCAGGAAGTCTTCCAATGACGTATGCTCTGAATTATCATACACATCATTTTaGTGTTTCCACATGCCTGTT +
Preference number: 3 (lower is better)
Translates to: ARFTLISRKSSNDVCSELSYTSF*CFHMPV
Trigger: AACAGGCATGTGGAAACACAAAAATGATGTGTATGA...TAATTCAGAGCATACGTCATTGGAAGACTTCCTGGAAATCAGTGTAAATCTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
3UTR-3UTR CAA 90 bp TCGGTGCAAAGCAGACTAGAAATACTGCTCATATTTATTCTCGCTGGAAAAAGTAATCACTTGGGAACCTaGTTAAGAATGCAAATTCTG +
Preference number: 3 (lower is better)
Translates to: SVQSRLEILLIFILAGKSNHLGT*LRMQIL
Trigger: CAGAATTTGCATTCTTAACAAGGTTCCCAAGTGATT...ACTTTTTCCAGCGAGAATAAATATGAGCAGTATTTCTAGTCTGCTTTGCACCGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR-3UTR CAA 90 bp TTGCTTTTTCAAAACAAACTTCAGGCATCATTTAAATGCCGAGAATTCCAACTCCTGATTGATGCTTCATaGGAAGTTCAGTTCTTTCTG +
Preference number: 3 (lower is better)
Translates to: LLFQNKLQASFKCREFQLLIDAS*EVQFFL
Trigger: CAGAAAGAACTGAACTTCCAATGAAGCATCAATCAG...GAGTTGGAATTCTCGGCATTTAAATGATGCCTGAAGTTTGTTTTGAAAAAGCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000440481.6
ENST00000681237.1
ENST00000681402.1
3UTR-3UTR CAA 90 bp GTTAACGTAACTCCGCTCTCCAGAAAATCAATTAGTGCAAATCATTTGAAGCAATTATACAGTGGTATCTaGAGAGCTATGTTGCAAGAT +
Preference number: 3 (lower is better)
Translates to: VNVTPLSRKSISANHLKQLYSGI*RAMLQD
Trigger: ATCTTGCAACATAGCTCTCAAGATACCACTGTATAA...TTGCTTCAAATGATTTGCACTAATTGATTTTCTGGAGAGCGGAGTTACGTTAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
3UTR TCA 72 bp TCATTTAAATGCCGAGAATTCCAACTCTTCAAGTCTTaGGAGCTTGCCTTAAAAATTTCCATAGTGGTATAC +
Preference number: 3 (lower is better)
Translates to: SFKCREFQLFKS*ELALKISIVVY
Trigger: GTATACCACTATGGAAATTTTTAAGGCAAGCTCTCAAGACTTGAAGAGTTGGAATTCTCGGCATTTAAATGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
3UTR TCA 72 bp CTTGATATTCGAGAGGAAGTTGGTGTGATTTCAACTTaGATACACCTTGTACCTTCCTTATTAGATTTCATG +
Preference number: 3 (lower is better)
Translates to: LDIREEVGVIST*IHLVPSLLDFM
Trigger: CATGAAATCTAATAAGGAAGGTACAAGGTGTATTCAAGTTGAAATCACACCAACTTCCTCTCGAATATCAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR TCA 72 bp TTACTGCATTTCTTGATATTCGAGAGGAAGTTGGTGTaGTTTCAACTTGAATACACCTTGTACCTTCCTTAT +
Preference number: 3 (lower is better)
Translates to: LLHFLIFERKLV*FQLEYTLYLPY
Trigger: ATAAGGAAGGTACAAGGTGTATTCAAGTTGAAATCACACCAACTTCCTCTCGAATATCAAGAAATGCAGTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR TCA 72 bp ACTGCACACATTTATAATGCAAGTGGGATCATACACTaGATAATCAATGTAAATCATCACATACAGATCTGC +
Preference number: 3 (lower is better)
Translates to: TAHIYNASGIIH*IINVNHHIQIC
Trigger: GCAGATCTGTATGTGATGATTTACATTGATTATTCAGTGTATGATCCCACTTGCATTATAAATGTGTGCAGT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR TCA 90 bp GCCCCACAACCAACAGCAGATGACGGGTTATGTGGGACTGTGACACCACTGACTCAGAACGGGTCCCGGTaGGCCATCTTCCCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: APQPTADDGLCGTVTPLTQNGSR*AIFPLL
Trigger: GAGGAGGGGGAAGATGGCTCACCGGGACCCGTTCTG...AGTCAGTGGTGTCACAGTCCCACATAACCCGTCATCTGCTGTTGGTTGTGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp GCCCCACAACCAACAGCAGATGACGGGTTATGTGGGACTGTGACACCACTGACTTGCCGGAGCTCCACCTaGAGGACCTCGACTCGTGAG +
Preference number: 4 (lower is better)
Translates to: APQPTADDGLCGTVTPLTCRSST*RTSTRE
Trigger: CTCACGAGTCGAGGTCCTGCAGGTGGAGCTCCGGCA...AGTCAGTGGTGTCACAGTCCCACATAACCCGTCATCTGCTGTTGGTTGTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp GCCCCACAACCAACAGCAGATGACGGGTTATGTGGGACTGTGACACCACTGACTGACAGCGACGGAGGCTaGTCTGCTTCCTCCCGAGTA +
Preference number: 4 (lower is better)
Translates to: APQPTADDGLCGTVTPLTDSDGG*SASSRV
Trigger: TACTCGGGAGGAAGCAGAGCAGCCTCCGTCGCTGTC...AGTCAGTGGTGTCACAGTCCCACATAACCCGTCATCTGCTGTTGGTTGTGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp CTTCTTGGAGACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAACCAGGACCTCGACTCGTaGGGCTCTCAGCGACAGCGA +
Preference number: 4 (lower is better)
Translates to: LLGDYKRKTYWHLSQPHNQDLDS*GSQRQR
Trigger: TCGCTGTCGCTGAGAGCCTCACGAGTCGAGGTCCTG...GTTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTCTCCAAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp TTGGAGACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAACCAACTCCCCCTCCTCTCACTaGCTGACAACCCAGCCGGGA +
Preference number: 4 (lower is better)
Translates to: LETTSGKPIGICPSPTTNSPSSH*LTTQPG
Trigger: TCCCGGCTGGGTTGTCAGTCAGTGAGAGGAGGGGGA...GTTGGTTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTCTCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000440481.6
ENST00000681237.1
CDS-3UTR TCA 90 bp GCCCCACAACCAACAGCAGATGACGGGTTATGTGGGACTGTGACACCACTGACTTCCTCAACGGTCAACTaGCTCAGCCTCAGCCGTGCT +
Preference number: 4 (lower is better)
Translates to: APQPTADDGLCGTVTPLTSSTVN*LSLSRA
Trigger: AGCACGGCTGAGGCTGAGTCAGTTGACCGTTGAGGA...AGTCAGTGGTGTCACAGTCCCACATAACCCGTCATCTGCTGTTGGTTGTGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440481.6
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp GACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAACCAACAGCAGGACAGCGACGGAGGCTaGTCTGCTTCCTCCCGAGTA +
Preference number: 4 (lower is better)
Translates to: DYKRKTYWHLSQPHNQQQDSDGG*SASSRV
Trigger: TACTCGGGAGGAAGCAGAGCAGCCTCCGTCGCTGTC...CTGCTGTTGGTTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp TTGGAGACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAACCAACTGCCGGAGCTCCACCTaGAGGACCTCGACTCGTGAG +
Preference number: 4 (lower is better)
Translates to: LETTSGKPIGICPSPTTNCRSST*RTSTRE
Trigger: CTCACGAGTCGAGGTCCTGCAGGTGGAGCTCCGGCA...GTTGGTTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTCTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp TCTTCTTGGAGACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAATTCAACCAGGGCGGCTaGCGGAGCTCCACCTGCAGG +
Preference number: 4 (lower is better)
Translates to: SSWRLQAENLLASVPAPQFNQGG*RSSTCR
Trigger: CCTGCAGGTGGAGCTCCGGCAGCCGCCCTGGTTGAA...TTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTCTCCAAGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp CTGTTTTCAGATTGGCTTCCTGACCAGGAGCTAGAGAATTCCTGGAGTTGTGCCTTCAACCAGGGCGGCTaGCGGAGCTCCACCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LFSDWLPDQELENSWSCAFNQGG*RSSTCR
Trigger: CCTGCAGGTGGAGCTCCGGCAGCCGCCCTGGTTGAA...GGCACAACTCCAGGAATTCTCTAGCTCCTGGTCAGGAAGCCAATCTGAAAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR TCA 90 bp CTGTTTTCAGATTGGCTTCCTGACCAGGAGCTAGAGAATTCCTGGAGTTGTGCCCAGGACCTCGACTCGTaGGGCTCTCAGCGACAGCGA +
Preference number: 4 (lower is better)
Translates to: LFSDWLPDQELENSWSCAQDLDS*GSQRQR
Trigger: TCGCTGTCGCTGAGAGCCTCACGAGTCGAGGTCCTG...GGCACAACTCCAGGAATTCTCTAGCTCCTGGTCAGGAAGCCAATCTGAAAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR TCA 90 bp TCTTCTTGGAGACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAATCCCCCTCCTCTCACTaGCTGACAACCCAGCCGGGA +
Preference number: 4 (lower is better)
Translates to: SSWRLQAENLLASVPAPQSPSSH*LTTQPG
Trigger: TCCCGGCTGGGTTGTCAGTCAGTGAGAGGAGGGGGA...TTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTCTCCAAGAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000440481.6
ENST00000681237.1
CDS-3UTR GCA 90 bp TCAGGGGAGCCTTCAGAATTTAAGACATCAGGGCTCCTGTCAGGAATACGGATGCGACGGAGGCTGCTCTaGTTCCTCCCGAGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: SGEPSEFKTSGLLSGIRMRRRLL*FLPSSS
Trigger: GCTGCTACTCGGGAGGAAGCAGAGCAGCCTCCGTCG...CATCCGTATTCCTGACAGGAGCCCTGATGTCTTAAATTCTGAAGGCTCCCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR GCA 90 bp CTGTTTTCAGATTGGCTTCCTGACCAGGAGCTAGAGAATTCCTGGAGTTGTGCCTGCCGGAGCTCCACCTaGAGGACCTCGACTCGTGAG +
Preference number: 4 (lower is better)
Translates to: LFSDWLPDQELENSWSCACRSST*RTSTRE
Trigger: CTCACGAGTCGAGGTCCTGCAGGTGGAGCTCCGGCA...GGCACAACTCCAGGAATTCTCTAGCTCCTGGTCAGGAAGCCAATCTGAAAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR GCA 90 bp GTCACAGTGAAAAAGAGCCAAGAACTGGACAGCTCCTTAGGTCTTCCTCAACGGTGCCGGAGCTCCACCTaGAGGACCTCGACTCGTGAG +
Preference number: 4 (lower is better)
Translates to: VTVKKSQELDSSLGLPQRCRSST*RTSTRE
Trigger: CTCACGAGTCGAGGTCCTGCAGGTGGAGCTCCGGCA...CCGTTGAGGAAGACCTAAGGAGCTGTCCAGTTCTTGGCTCTTTTTCACTGTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp TCAGGGGAGCCTTCAGAATTTAAGACATCAGGGCTCCTGTCAGGAATACGGATGTGCCGGAGCTCCACCTaGAGGACCTCGACTCGTGAG +
Preference number: 4 (lower is better)
Translates to: SGEPSEFKTSGLLSGIRMCRSST*RTSTRE
Trigger: CTCACGAGTCGAGGTCCTGCAGGTGGAGCTCCGGCA...CATCCGTATTCCTGACAGGAGCCCTGATGTCTTAAATTCTGAAGGCTCCCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR GCA 90 bp CCAGGAGCTAGAGAATTCCTGGAGTTGTGCCTCTGCCCCATTCTCTATAAAACATTCAACCAGGGCGGCTaGCGGAGCTCCACCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PGAREFLELCLCPILYKTFNQGG*RSSTCR
Trigger: CCTGCAGGTGGAGCTCCGGCAGCCGCCCTGGTTGAA...TGTTTTATAGAGAATGGGGCAGAGGCACAACTCCAGGAATTCTCTAGCTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR GCA 90 bp GGGCTCCTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAAGAAGCATTCAACCAGGGCGGCTaGCGGAGCTCCACCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GLLSGIRMKDPGYFHKEAFNQGG*RSSTCR
Trigger: CCTGCAGGTGGAGCTCCGGCAGCCGCCCTGGTTGAA...TGCTTCTTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAGGAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR GCA 90 bp CCAGGAGCTAGAGAATTCCTGGAGTTGTGCCTCTGCCCCATTCTCTATAAAACACGACGGAGGCTGCTCTaGTTCCTCCCGAGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: PGAREFLELCLCPILYKTRRRLL*FLPSSS
Trigger: GCTGCTACTCGGGAGGAAGCAGAGCAGCCTCCGTCG...TGTTTTATAGAGAATGGGGCAGAGGCACAACTCCAGGAATTCTCTAGCTCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR GCA 90 bp TCCCATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAATGCCGGAGCTCCACCTaGAGGACCTCGACTCGTGAG +
Preference number: 4 (lower is better)
Translates to: SHTCRLPLTLKAKHTAIKCRSST*RTSTRE
Trigger: CTCACGAGTCGAGGTCCTGCAGGTGGAGCTCCGGCA...TTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR TCA 90 bp ACATCAGGGCTCCTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAACAGGACCTCGACTCGTaGGGCTCTCAGCGACAGCGA +
Preference number: 4 (lower is better)
Translates to: TSGLLSGIRMKDPGYFHKQDLDS*GSQRQR
Trigger: TCGCTGTCGCTGAGAGCCTCACGAGTCGAGGTCCTG...TTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAGGAGCCCTGATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR TCA 90 bp TCCTTAGGTCTTCCTCAACGGTCAACTGACTCAGCCTCAGCCGTGCTTTCTCTCTCGGGTTGTAGGAGGTaGGTCAGCTATGTGGACTAC +
Preference number: 4 (lower is better)
Translates to: SLGLPQRSTDSASAVLSLSGCRR*VSYVDY
Trigger: GTAGTCCACATAGCTGACTCACCTCCTACAACCCGA...GAGAGAAAGCACGGCTGAGGCTGAGTCAGTTGACCGTTGAGGAAGACCTAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR GCA 90 bp TTCCTCCAGTTTTGCTTCCTCCTGACCGTCTGTGGTTCTTTCCTATACTTGGCTGACAGCGACGGAGGCTaGTCTGCTTCCTCCCGAGTA +
Preference number: 4 (lower is better)
Translates to: FLQFCFLLTVCGSFLYLADSDGG*SASSRV
Trigger: TACTCGGGAGGAAGCAGAGCAGCCTCCGTCGCTGTC...AGCCAAGTATAGGAAAGAACCACAGACGGTCAGGAGGAAGCAAAACTGGAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp CCAGGAGCTAGAGAATTCCTGGAGTTGTGCCTCTGCCCCATTCTCTATAAAACAGACAGCGACGGAGGCTaGTCTGCTTCCTCCCGAGTA +
Preference number: 4 (lower is better)
Translates to: PGAREFLELCLCPILYKTDSDGG*SASSRV
Trigger: TACTCGGGAGGAAGCAGAGCAGCCTCCGTCGCTGTC...TGTTTTATAGAGAATGGGGCAGAGGCACAACTCCAGGAATTCTCTAGCTCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR GCA 90 bp ACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAAATAGGATGCCGGAGCTCCACCTaGAGGACCTCGACTCGTGAG +
Preference number: 4 (lower is better)
Translates to: TCRLPLTLKAKHTAIKIGCRSST*RTSTRE
Trigger: CTCACGAGTCGAGGTCCTGCAGGTGGAGCTCCGGCA...TCCTATTTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CCA 90 bp TTGGAGACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAACCAACGGAAGACATTTGCCCTaGGTAGTCTGGGACAGTCCC +
Preference number: 4 (lower is better)
Translates to: LETTSGKPIGICPSPTTNGRHLP*VVWDSP
Trigger: GGGACTGTCCCAGACTACCCAGGGCAAATGTCTTCC...GTTGGTTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTCTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440481.6
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp AAGAGAGAAGCTCAAGATTCTCACTTTGGGCTCTCTGAGTTTGTTTTCGAGCAACAGAACGGGTCCCGGTaGGCCATCTTCCCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: KREAQDSHFGLSEFVFEQQNGSR*AIFPLL
Trigger: GAGGAGGGGGAAGATGGCTCACCGGGACCCGTTCTG...TTGCTCGAAAACAAACTCAGAGAGCCCAAAGTGAGAATCTTGAGCTTCTCTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp ATAAAGTCAGGGGAGCCTTCAGAATTTAAGACATCAGGGCTCCTGTCAGGAATACAGGACCTCGACTCGTaGGGCTCTCAGCGACAGCGA +
Preference number: 4 (lower is better)
Translates to: IKSGEPSEFKTSGLLSGIQDLDS*GSQRQR
Trigger: TCGCTGTCGCTGAGAGCCTCACGAGTCGAGGTCCTG...TATTCCTGACAGGAGCCCTGATGTCTTAAATTCTGAAGGCTCCCCTGACTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR TCA 90 bp TTGGAGACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAACCAACCACATTTCTGCTGGCTaGGACTGCAAGGTAGCACCA +
Preference number: 4 (lower is better)
Translates to: LETTSGKPIGICPSPTTNHISAG*DCKVAP
Trigger: TGGTGCTACCTTGCAGTCTCAGCCAGCAGAAATGTG...GTTGGTTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTCTCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681402.1
CDS-3UTR GCA 90 bp ATAAAGTCAGGGGAGCCTTCAGAATTTAAGACATCAGGGCTCCTGTCAGGAATACGACGGAGGCTGCTCTaGTTCCTCCCGAGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: IKSGEPSEFKTSGLLSGIRRRLL*FLPSSS
Trigger: GCTGCTACTCGGGAGGAAGCAGAGCAGCCTCCGTCG...TATTCCTGACAGGAGCCCTGATGTCTTAAATTCTGAAGGCTCCCCTGACTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR GCA 90 bp CATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAAATACGACGGAGGCTGCTCTaGTTCCTCCCGAGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: HTCRLPLTLKAKHTAIKIRRRLL*FLPSSS
Trigger: GCTGCTACTCGGGAGGAAGCAGAGCAGCCTCCGTCG...TATTTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR GCA 90 bp ACCACTGACTTGTTCAAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAATTCAACCAGGGCGGCTaGCGGAGCTCCACCTGCAGG +
Preference number: 4 (lower is better)
Translates to: TTDLFKGFTKYSRCGLSQFNQGG*RSSTCR
Trigger: CCTGCAGGTGGAGCTCCGGCAGCCGCCCTGGTTGAA...TTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTTGAACAAGTCAGTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp CCTGGAATAAAATCCCTCGTCAACTTCAGATATCTCCATCAGTTCTTCTTGACCTTCAACCAGGGCGGCTaGCGGAGCTCCACCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PGIKSLVNFRYLHQFFLTFNQGG*RSSTCR
Trigger: CCTGCAGGTGGAGCTCCGGCAGCCGCCCTGGTTGAA...GGTCAAGAAGAACTGATGGAGATATCTGAAGTTGACGAGGGATTTTATTCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp TCAGGGGAGCCTTCAGAATTTAAGACATCAGGGCTCCTGTCAGGAATACGGATGGGAAGACATTTGCCCTaGGTAGTCTGGGACAGTCCC +
Preference number: 4 (lower is better)
Translates to: SGEPSEFKTSGLLSGIRMGRHLP*VVWDSP
Trigger: GGGACTGTCCCAGACTACCCAGGGCAAATGTCTTCC...CATCCGTATTCCTGACAGGAGCCCTGATGTCTTAAATTCTGAAGGCTCCCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp GATCTCTCAGCTCTGTCAGCTAACATTTCCCCAAACTTATTCTACAATGTTTCCCAGAACGGGTCCCGGTaGGCCATCTTCCCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: DLSALSANISPNLFYNVSQNGSR*AIFPLL
Trigger: GAGGAGGGGGAAGATGGCTCACCGGGACCCGTTCTG...GGAAACATTGTAGAATAAGTTTGGGGAAATGTTAGCTGACAGAGCTGAGAGATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp ACCACTGACTTGTTCAAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAACAGGACCTCGACTCGTaGGGCTCTCAGCGACAGCGA +
Preference number: 4 (lower is better)
Translates to: TTDLFKGFTKYSRCGLSQQDLDS*GSQRQR
Trigger: TCGCTGTCGCTGAGAGCCTCACGAGTCGAGGTCCTG...TTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTTGAACAAGTCAGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp CTGACTTGTTCAAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCACAGGACCTCGACTCGTaGGGCTCTCAGCGACAGCGA +
Preference number: 4 (lower is better)
Translates to: LTCSKDLLNTVAAVLAKPQDLDS*GSQRQR
Trigger: TCGCTGTCGCTGAGAGCCTCACGAGTCGAGGTCCTG...TGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTTGAACAAGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp ATTTCCATAGTGGTATACAAAGGACTCCAGGGTGCTTTCCTGTGGCTTCAGGAATGGAGTACAGTGGCATaGTCTCGGCTCACTGCAGCC +
Preference number: 4 (lower is better)
Translates to: ISIVVYKGLQGAFLWLQEWSTVA*SRLTAA
Trigger: GGCTGCAGTGAGCCGAGATCATGCCACTGTACTCCA...TTCCTGAAGCCACAGGAAAGCACCCTGGAGTCCTTTGTATACCACTATGGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR TCA 90 bp TCAGGGGAGCCTTCAGAATTTAAGACATCAGGGCTCCTGTCAGGAATACGGATGACCTGTGTTCAAGGCTaGGTTTTGCCACTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SGEPSEFKTSGLLSGIRMTCVQG*VLPLSS
Trigger: GCTGCTGAGTGGCAAAACTCAGCCTTGAACACAGGT...CATCCGTATTCCTGACAGGAGCCCTGATGTCTTAAATTCTGAAGGCTCCCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR GCA 90 bp ATAAAGTCAGGGGAGCCTTCAGAATTTAAGACATCAGGGCTCCTGTCAGGAATAGACAGCGACGGAGGCTaGTCTGCTTCCTCCCGAGTA +
Preference number: 4 (lower is better)
Translates to: IKSGEPSEFKTSGLLSGIDSDGG*SASSRV
Trigger: TACTCGGGAGGAAGCAGAGCAGCCTCCGTCGCTGTC...TATTCCTGACAGGAGCCCTGATGTCTTAAATTCTGAAGGCTCCCCTGACTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR GCA 90 bp TTCAAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTTGCCGGAGCTCCACCTaGAGGACCTCGACTCGTGAG +
Preference number: 4 (lower is better)
Translates to: FKGFTKYSRCGLSQTMATCRSST*RTSTRE
Trigger: CTCACGAGTCGAGGTCCTGCAGGTGGAGCTCCGGCA...AGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp GCCCCACAACCAACAGCAGATGACGGGTTATGTGGGACTGTGACACCACTGACTACTGCTCCTCTCCACTaGGATAGAATTCAAAGAGCT +
Preference number: 4 (lower is better)
Translates to: APQPTADDGLCGTVTPLTTAPLH*DRIQRA
Trigger: AGCTCTTTGAATTCTATCGCAGTGGAGAGGAGCAGT...AGTCAGTGGTGTCACAGTCCCACATAACCCGTCATCTGCTGTTGGTTGTGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
CDS-3UTR GCA 90 bp GACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAACCAACAGCAGCTTTTCCTCCAGTTTTaGTTCCTCCTGACCGTCTGT +
Preference number: 4 (lower is better)
Translates to: DYKRKTYWHLSQPHNQQQLFLQF*FLLTVC
Trigger: ACAGACGGTCAGGAGGAAGCAAAACTGGAGGAAAAG...CTGCTGTTGGTTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp GACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAACCAACAGCAGCCATGGACCCAATGCTaGAAGGTTCATGGTATACAG +
Preference number: 4 (lower is better)
Translates to: DYKRKTYWHLSQPHNQQQPWTQC*KVHGIQ
Trigger: CTGTATACCATGAACCTTCCAGCATTGGGTCCATGG...CTGCTGTTGGTTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp CTTGGAGACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAACCAATTTGATAAACCCGACTaGCTGGTACTAGACGCAGCC +
Preference number: 4 (lower is better)
Translates to: LGDYKRKTYWHLSQPHNQFDKPD*LVLDAA
Trigger: GGCTGCGTCTAGTACCAGCCAGTCGGGTTTATCAAA...TTGGTTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTCTCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp TCTTGGAGACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAACCAGCCAATCCTACTTACTaGTCCTCAGACCACACAGCT +
Preference number: 4 (lower is better)
Translates to: SWRLQAENLLASVPAPQPANPTY*SSDHTA
Trigger: AGCTGTGTGGTCTGAGGACCAGTAAGTAGGATTGGC...TGGTTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTCTCCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440481.6
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp AGCAGGAACAAGAGGAAAACACTAGCATGCTCTCTTGGTGACTACAGCAAGGGACAGGGTGCTTTCCTGTaGCTTCAGGAAGGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: SRNKRKTLACSLGDYSKGQGAFL*LQEGKG
Trigger: TCCCTTCCCTTCCTGAAGCCACAGGAAAGCACCCTG...TCCCTTGCTGTAGTCACCAAGAGAGCATGCTAGTGTTTTCCTCTTGTTCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp ATTTCCATAGTGGTATACAAAGGACTCCAGGGTGCTTTCCTGTGGCTTCAGGAACAGGCTGGAGTGCAGTaGTGCTATCTCGGCTCACCT +
Preference number: 4 (lower is better)
Translates to: ISIVVYKGLQGAFLWLQEQAGVQ*CYLGSP
Trigger: AGGTGAGCCGAGATAGCACCACTGCACTCCAGCCTG...TTCCTGAAGCCACAGGAAAGCACCCTGGAGTCCTTTGTATACCACTATGGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR TCA 90 bp CACCTCCACAGAGGATTTGTTTATTACCAAGCACTTAGGGGATCATTTTTAATCCAGAACGGGTCCCGGTaGGCCATCTTCCCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: HLHRGFVYYQALRGSFLIQNGSR*AIFPLL
Trigger: GAGGAGGGGGAAGATGGCTCACCGGGACCCGTTCTG...GATTAAAAATGATCCCCTAAGTGCTTGGTAATAAACAAATCCTCTGTGGAGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR TCA 90 bp ATTCTGTATTTCCATGTCTTTTCCACCTATGACCCCTTATTGACATGCTGGTTACAGAACGGGTCCCGGTaGGCCATCTTCCCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: ILYFHVFSTYDPLLTCWLQNGSR*AIFPLL
Trigger: GAGGAGGGGGAAGATGGCTCACCGGGACCCGTTCTG...TAACCAGCATGTCAATAAGGGGTCATAGGTGGAAAAGACATGGAAATACAGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp AGCAGGAACAAGAGGAAAACACTAGCATGCTCTCTTGGTGACTACAGCAAGGGACACATTTCTGCTGGCTaGGACTGCAAGGTAGCACCA +
Preference number: 4 (lower is better)
Translates to: SRNKRKTLACSLGDYSKGHISAG*DCKVAP
Trigger: TGGTGCTACCTTGCAGTCTCAGCCAGCAGAAATGTG...TCCCTTGCTGTAGTCACCAAGAGAGCATGCTAGTGTTTTCCTCTTGTTCCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681402.1
CDS-3UTR TCA 90 bp GCCCCACAACCAACAGCAGATGACGGGTTATGTGGGACTGTGACACCACTGACTGAGAGGAAGTTGGTGTaGTTTCAACTTGAATACACC +
Preference number: 4 (lower is better)
Translates to: APQPTADDGLCGTVTPLTERKLV*FQLEYT
Trigger: GGTGTATTCAAGTTGAAATCACACCAACTTCCTCTC...AGTCAGTGGTGTCACAGTCCCACATAACCCGTCATCTGCTGTTGGTTGTGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp TCTTCTTGGAGACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAAAGTTTTGCTTCCTCCTaGCCGTCTGTGGTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: SSWRLQAENLLASVPAPQSFASS*PSVVLS
Trigger: GGAAAGAACCACAGACGGTCAGGAGGAAGCAAAACT...TTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTCTCCAAGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp AACAGTTCCCATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCACAACCAACAGCAGATaGCGGGTTATGTGGGACTGT +
Preference number: 4 (lower is better)
Translates to: NSSHTCRLPLTLKAKHTATTNSR*RVMWDC
Trigger: ACAGTCCCACATAACCCGTCATCTGCTGTTGGTTGT...GGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATGGGAACTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR TCA 90 bp ACTGTGACACCACTGACTTGTTCAAAGGATTTACTAAATACAGTCGCTGCGGTCTCCTCAACGGTCAACTaGCTCAGCCTCAGCCGTGCT +
Preference number: 4 (lower is better)
Translates to: TVTPLTCSKDLLNTVAAVSSTVN*LSLSRA
Trigger: AGCACGGCTGAGGCTGAGTCAGTTGACCGTTGAGGA...GACCGCAGCGACTGTATTTAGTAAATCCTTTGAACAAGTCAGTGGTGTCACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440481.6
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp TCAGGGGAGCCTTCAGAATTTAAGACATCAGGGCTCCTGTCAGGAATACGGATGGCTGTGCAGTCACAGTaGAAAAGAGCCAAGAACTGG +
Preference number: 4 (lower is better)
Translates to: SGEPSEFKTSGLLSGIRMAVQSQ*KRAKNW
Trigger: CCAGTTCTTGGCTCTTTTTCACTGTGACTGCACAGC...CATCCGTATTCCTGACAGGAGCCCTGATGTCTTAAATTCTGAAGGCTCCCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp AACCGCTGTGCAGTCACAGTGAAAAAGAGCCAAGAACTGGACAGCTCCTTAGGTTACAGCAAGGGACTATaGAGAAGGAAACCGCTGTGC +
Preference number: 4 (lower is better)
Translates to: NRCAVTVKKSQELDSSLGYSKGL*RRKPLC
Trigger: GCACAGCGGTTTCCTTCTTCATAGTCCCTTGCTGTA...ACCTAAGGAGCTGTCCAGTTCTTGGCTCTTTTTCACTGTGACTGCACAGCGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp GGGCTCCTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAAGAAGCAACTTCTGACTTTAGGTaGTCCACCCACCTCGGCTTC +
Preference number: 4 (lower is better)
Translates to: GLLSGIRMKDPGYFHKEATSDFR*STHLGF
Trigger: GAAGCCGAGGTGGGTGGATCACCTAAAGTCAGAAGT...TGCTTCTTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAGGAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR GCA 90 bp AAGAGAGAAGCTCAAGATTCTCACTTTGGGCTCTCTGAGTTTGTTTTCGAGCAAGACAGCGACGGAGGCTaGTCTGCTTCCTCCCGAGTA +
Preference number: 4 (lower is better)
Translates to: KREAQDSHFGLSEFVFEQDSDGG*SASSRV
Trigger: TACTCGGGAGGAAGCAGAGCAGCCTCCGTCGCTGTC...TTGCTCGAAAACAAACTCAGAGAGCCCAAAGTGAGAATCTTGAGCTTCTCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp AAATGTTTCAGAGATAACAACAGAAATGCCTCTAGCCATCCCCTGGAATCATATTTCAACCAGGGCGGCTaGCGGAGCTCCACCTGCAGG +
Preference number: 4 (lower is better)
Translates to: KCFRDNNRNASSHPLESYFNQGG*RSSTCR
Trigger: CCTGCAGGTGGAGCTCCGGCAGCCGCCCTGGTTGAA...ATATGATTCCAGGGGATGGCTAGAGGCATTTCTGTTGTTATCTCTGAAACATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR GCA 90 bp GCCCCACAACCAACAGCAGATGACGGGTTATGTGGGACTGTGACACCACTGACTGACCCCTTATTGACATaGTGGTTACTGCATTTCTTG +
Preference number: 4 (lower is better)
Translates to: APQPTADDGLCGTVTPLTDPLLT*WLLHFL
Trigger: CAAGAAATGCAGTAACCAGCATGTCAATAAGGGGTC...AGTCAGTGGTGTCACAGTCCCACATAACCCGTCATCTGCTGTTGGTTGTGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp CTTGGAGACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAACCAACTTTTCCTCCAGTTTTaGTTCCTCCTGACCGTCTGT +
Preference number: 4 (lower is better)
Translates to: LGDYKRKTYWHLSQPHNQLFLQF*FLLTVC
Trigger: ACAGACGGTCAGGAGGAAGCAAAACTGGAGGAAAAG...TTGGTTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTCTCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp TCCTGGGCTCGAGTGAACCTCCTGAGTAGTTGGGACTACTACTCACCACACATGCTGGAGTTGTGCCTCTaGCCCATTCTCTATAAAACA +
Preference number: 4 (lower is better)
Translates to: SWARVNLLSSWDYYSPHMLELCL*PILYKT
Trigger: TGTTTTATAGAGAATGGGGCAGAGGCACAACTCCAG...CATGTGTGGTGAGTAGTAGTCCCAACTACTCAGGAGGTTCACTCGAGCCCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR GCA 90 bp TCCTTAGGTCTTCCTCAACGGTCAACTGACTCAGCCTCAGCCGTGCTTTCTCTCCTGGAGTTGTGCCTCTaGCCCATTCTCTATAAAACA +
Preference number: 4 (lower is better)
Translates to: SLGLPQRSTDSASAVLSLLELCL*PILYKT
Trigger: TGTTTTATAGAGAATGGGGCAGAGGCACAACTCCAG...GAGAGAAAGCACGGCTGAGGCTGAGTCAGTTGACCGTTGAGGAAGACCTAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp AGCAGGAACAAGAGGAAAACACTAGCATGCTCTCTTGGTGACTACAGCAAGGGATTCAAGCGATTCTCCTaGCACAGCCTCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: SRNKRKTLACSLGDYSKGFKRFS*HSLLSS
Trigger: GCTACTCAGGAGGCTGTGGCAGGAGAATCGCTTGAA...TCCCTTGCTGTAGTCACCAAGAGAGCATGCTAGTGTTTTCCTCTTGTTCCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR GCA 90 bp TCAGGGGAGCCTTCAGAATTTAAGACATCAGGGCTCCTGTCAGGAATACGGATGCTCTGCTCTCCCAAGTaGGATTGGTTTAAAGGCCCT +
Preference number: 4 (lower is better)
Translates to: SGEPSEFKTSGLLSGIRMLCSPK*DWFKGP
Trigger: AGGGCCTTTAAACCAATCGCACTTGGGAGAGCAGAG...CATCCGTATTCCTGACAGGAGCCCTGATGTCTTAAATTCTGAAGGCTCCCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CCA 90 bp CTGTTTTCAGATTGGCTTCCTGACCAGGAGCTAGAGAATTCCTGGAGTTGTGCCTTTGATAAACCCGACTaGCTGGTACTAGACGCAGCC +
Preference number: 4 (lower is better)
Translates to: LFSDWLPDQELENSWSCAFDKPD*LVLDAA
Trigger: GGCTGCGTCTAGTACCAGCCAGTCGGGTTTATCAAA...GGCACAACTCCAGGAATTCTCTAGCTCCTGGTCAGGAAGCCAATCTGAAAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CCA 90 bp CTGTTTTCAGATTGGCTTCCTGACCAGGAGCTAGAGAATTCCTGGAGTTGTGCCCCTCCTGACCGTCTGTaGTTCTTTCCTATACTTGGC +
Preference number: 4 (lower is better)
Translates to: LFSDWLPDQELENSWSCAPPDRL*FFPILG
Trigger: GCCAAGTATAGGAAAGAACCACAGACGGTCAGGAGG...GGCACAACTCCAGGAATTCTCTAGCTCCTGGTCAGGAAGCCAATCTGAAAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CCA 90 bp CCAGGAGCTAGAGAATTCCTGGAGTTGTGCCTCTGCCCCATTCTCTATAAAACAAAGCGGAAAACCTATTaGCATCTGTCCCAGCCCCAC +
Preference number: 4 (lower is better)
Translates to: PGAREFLELCLCPILYKTKRKTY*HLSQPH
Trigger: GTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTT...TGTTTTATAGAGAATGGGGCAGAGGCACAACTCCAGGAATTCTCTAGCTCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CCA 90 bp TTCCTCCAGTTTTGCTTCCTCCTGACCGTCTGTGGTTCTTTCCTATACTTGGCTGAGCTAGAGAATTCCTaGAGTTGTGCCTCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: FLQFCFLLTVCGSFLYLAELENS*SCASAP
Trigger: TGGGGCAGAGGCACAACTCCAGGAATTCTCTAGCTC...AGCCAAGTATAGGAAAGAACCACAGACGGTCAGGAGGAAGCAAAACTGGAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp TCTTGGAGACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAACCATGCCTGTTTTCAGATTaGCTTCCTGACCAGGAGCTA +
Preference number: 4 (lower is better)
Translates to: SWRLQAENLLASVPAPQPCLFSD*LPDQEL
Trigger: TAGCTCCTGGTCAGGAAGCCAATCTGAAAACAGGCA...TGGTTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTCTCCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp AACAGTTCCCATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCTTGCCCTGGGTAGTCTaGGACAGTCCCTTGAAAAGT +
Preference number: 4 (lower is better)
Translates to: NSSHTCRLPLTLKAKHTALPWVV*DSPLKS
Trigger: ACTTTTCAAGGGACTGTCCCAGACTACCCAGGGCAA...GGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATGGGAACTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp CTGTTTTCAGATTGGCTTCCTGACCAGGAGCTAGAGAATTCCTGGAGTTGTGCCTTGCCCTGGGTAGTCTaGGACAGTCCCTTGAAAAGT +
Preference number: 4 (lower is better)
Translates to: LFSDWLPDQELENSWSCALPWVV*DSPLKS
Trigger: ACTTTTCAAGGGACTGTCCCAGACTACCCAGGGCAA...GGCACAACTCCAGGAATTCTCTAGCTCCTGGTCAGGAAGCCAATCTGAAAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp ACTAACTATCTGGTCACCCTCAGATGTTGTATCTTAGGATGGTCACTGCTGCTGGGAAGACATTTGCCCTaGGTAGTCTGGGACAGTCCC +
Preference number: 4 (lower is better)
Translates to: TNYLVTLRCCILGWSLLLGRHLP*VVWDSP
Trigger: GGGACTGTCCCAGACTACCCAGGGCAAATGTCTTCC...CAGCAGCAGTGACCATCCTAAGATACAACATCTGAGGGTGACCAGATAGTTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CCA 90 bp GGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTAGGCTTGGAAGACATTTGCCCTaGGTAGTCTGGGACAGTCCC +
Preference number: 4 (lower is better)
Translates to: GFTKYSRCGLSQTMATRLGRHLP*VVWDSP
Trigger: GGGACTGTCCCAGACTACCCAGGGCAAATGTCTTCC...AAGCCTAGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440481.6
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp ATTTCCATAGTGGTATACAAAGGACTCCAGGGTGCTTTCCTGTGGCTTCAGGAACAGGGTGCTTTCCTGTaGCTTCAGGAAGGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: ISIVVYKGLQGAFLWLQEQGAFL*LQEGKG
Trigger: TCCCTTCCCTTCCTGAAGCCACAGGAAAGCACCCTG...TTCCTGAAGCCACAGGAAAGCACCCTGGAGTCCTTTGTATACCACTATGGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp ACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAAATAGGACAGGGTGCTTTCCTGTaGCTTCAGGAAGGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: TCRLPLTLKAKHTAIKIGQGAFL*LQEGKG
Trigger: TCCCTTCCCTTCCTGAAGCCACAGGAAAGCACCCTG...TCCTATTTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp ACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAAATAGGACAGGCTGGAGTACAGTaGCATGATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: TCRLPLTLKAKHTAIKIGQAGVQ*HDLGSL
Trigger: CAGTGAGCCGAGATCATGCCACTGTACTCCAGCCTG...TCCTATTTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CCA 90 bp GTCACAGTGAAAAAGAGCCAAGAACTGGACAGCTCCTTAGGTCTTCCTCAACGGATTCCCACAGGGCTGTaGTCTAGTGAGGGAGACAAA +
Preference number: 4 (lower is better)
Translates to: VTVKKSQELDSSLGLPQRIPTGL*SSEGDK
Trigger: TTTGTCTCCCTCACTAGACCACAGCCCTGTGGGAAT...CCGTTGAGGAAGACCTAAGGAGCTGTCCAGTTCTTGGCTCTTTTTCACTGTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR CAA 72 bp GCAGAATGTCTGCTCACTTCTCTGGTTAAAATACTTTaGTATTGGGAGTCCCCAAGACCACGCCAGCACCCC +
Preference number: 4 (lower is better)
Translates to: AECLLTSLVKIL*YWESPRPRQHP
Trigger: GGGGTGCTGGCGTGGTCTTGGGGACTCCCAATACAAAAGTATTTTAACCAGAGAAGTGAGCAGACATTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR TCA 90 bp AAATGTTTCAGAGATAACAACAGAAATGCCTCTAGCCATCCCCTGGAATCATATCAGGACCTCGACTCGTaGGGCTCTCAGCGACAGCGA +
Preference number: 4 (lower is better)
Translates to: KCFRDNNRNASSHPLESYQDLDS*GSQRQR
Trigger: TCGCTGTCGCTGAGAGCCTCACGAGTCGAGGTCCTG...ATATGATTCCAGGGGATGGCTAGAGGCATTTCTGTTGTTATCTCTGAAACATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR TCA 90 bp GCAAGATTTACACTGATTTCCAGGAAGTCTTCCAATGACGTATGCTCTGAATTACAGGACCTCGACTCGTaGGGCTCTCAGCGACAGCGA +
Preference number: 4 (lower is better)
Translates to: ARFTLISRKSSNDVCSELQDLDS*GSQRQR
Trigger: TCGCTGTCGCTGAGAGCCTCACGAGTCGAGGTCCTG...TAATTCAGAGCATACGTCATTGGAAGACTTCCTGGAAATCAGTGTAAATCTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR TCA 90 bp AAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTAGGCCACATTTCTGCTGGCTaGGACTGCAAGGTAGCACCA +
Preference number: 4 (lower is better)
Translates to: KDLLNTVAAVLAKPWLLGHISAG*DCKVAP
Trigger: TGGTGCTACCTTGCAGTCTCAGCCAGCAGAAATGTG...GCCTAGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681402.1
CDS-3UTR TCA 90 bp AACAGTTCCCATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCGGGACCATGAGGCAATaGAGCCTTTATTGCATTAGC +
Preference number: 4 (lower is better)
Translates to: NSSHTCRLPLTLKAKHTAGTMRQ*SLYCIS
Trigger: GCTAATGCAATAAAGGCTTCATTGCCTCATGGTCCC...GGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATGGGAACTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR TCA 90 bp GACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAACCAACAGCAGGAGAGGAAGTTGGTGTaGTTTCAACTTGAATACACC +
Preference number: 4 (lower is better)
Translates to: DYKRKTYWHLSQPHNQQQERKLV*FQLEYT
Trigger: GGTGTATTCAAGTTGAAATCACACCAACTTCCTCTC...CTGCTGTTGGTTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp TCTTGGAGACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAACCACCTATGACCCCTTATTaGCATGCTGGTTACTGCATT +
Preference number: 4 (lower is better)
Translates to: SWRLQAENLLASVPAPQPPMTPY*HAGYCI
Trigger: AATGCAGTAACCAGCATGTCAATAAGGGGTCATAGG...TGGTTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTCTCCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp CTTGGAGACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAACCAACCTATGACCCCTTATTaGCATGCTGGTTACTGCATT +
Preference number: 4 (lower is better)
Translates to: LGDYKRKTYWHLSQPHNQPMTPY*HAGYCI
Trigger: AATGCAGTAACCAGCATGTCAATAAGGGGTCATAGG...TTGGTTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTCTCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp TTGGAGACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAACCAACCCTATGACCCCTTATTaGCATGCTGGTTACTGCATT +
Preference number: 4 (lower is better)
Translates to: LETTSGKPIGICPSPTTNPMTPY*HAGYCI
Trigger: AATGCAGTAACCAGCATGTCAATAAGGGGTCATAGG...GTTGGTTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTCTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp CTCCAGTTTTGCTTCCTCCTGACCGTCTGTGGTTCTTTCCTATACTTGGCTTGTCAGATTTTTGCCTCCTaGTCTCTGGCAAGCCTTTGC +
Preference number: 4 (lower is better)
Translates to: LQFCFLLTVCGSFLYLACQIFAS*SLASLC
Trigger: GCAAAGGCTTGCCAGAGATCAGGAGGCAAAAATCTG...ACAAGCCAAGTATAGGAAAGAACCACAGACGGTCAGGAGGAAGCAAAACTGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409923.5
ENST00000440481.6
CDS-3UTR TCA 90 bp GGGCTCCTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAAGAAGCAACAACCAACAGCAGATaGCGGGTTATGTGGGACTGT +
Preference number: 4 (lower is better)
Translates to: GLLSGIRMKDPGYFHKEATTNSR*RVMWDC
Trigger: ACAGTCCCACATAACCCGTCATCTGCTGTTGGTTGT...TGCTTCTTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAGGAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR TCA 90 bp TCTTCTTGGAGACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAATGTCAGGAATACGGATaGAAGACCCAGGGTACTTTC +
Preference number: 4 (lower is better)
Translates to: SSWRLQAENLLASVPAPQCQEYG*KTQGTF
Trigger: GAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACA...TTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTCTCCAAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp CTGTTTTCAGATTGGCTTCCTGACCAGGAGCTAGAGAATTCCTGGAGTTGTGCCTGTCAGGAATACGGATaGAAGACCCAGGGTACTTTC +
Preference number: 4 (lower is better)
Translates to: LFSDWLPDQELENSWSCACQEYG*KTQGTF
Trigger: GAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACA...GGCACAACTCCAGGAATTCTCTAGCTCCTGGTCAGGAAGCCAATCTGAAAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR TCA 90 bp CTCCAGTTTTGCTTCCTCCTGACCGTCTGTGGTTCTTTCCTATACTTGGCTTGTGCTGTGCAGTCACAGTaGAAAAGAGCCAAGAACTGG +
Preference number: 4 (lower is better)
Translates to: LQFCFLLTVCGSFLYLACAVQSQ*KRAKNW
Trigger: CCAGTTCTTGGCTCTTTTTCACTGTGACTGCACAGC...ACAAGCCAAGTATAGGAAAGAACCACAGACGGTCAGGAGGAAGCAAAACTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440481.6
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp TCAGGGGAGCCTTCAGAATTTAAGACATCAGGGCTCCTGTCAGGAATACGGATGTCTGTTCAGATCCTCTaGAATATGGGGTGCAAGACC +
Preference number: 4 (lower is better)
Translates to: SGEPSEFKTSGLLSGIRMSVQIL*NMGCKT
Trigger: GGTCTTGCACCCCATATTTCAGAGGATCTGAACAGA...CATCCGTATTCCTGACAGGAGCCCTGATGTCTTAAATTCTGAAGGCTCCCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp AACAGTTCCCATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCTCTGTTCAGATCCTCTaGAATATGGGGTGCAAGACC +
Preference number: 4 (lower is better)
Translates to: NSSHTCRLPLTLKAKHTASVQIL*NMGCKT
Trigger: GGTCTTGCACCCCATATTTCAGAGGATCTGAACAGA...GGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATGGGAACTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp TCTTCTTGGAGACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAATCTGTTCAGATCCTCTaGAATATGGGGTGCAAGACC +
Preference number: 4 (lower is better)
Translates to: SSWRLQAENLLASVPAPQSVQIL*NMGCKT
Trigger: GGTCTTGCACCCCATATTTCAGAGGATCTGAACAGA...TTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTCTCCAAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000440481.6
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp AGCAGGAACAAGAGGAAAACACTAGCATGCTCTCTTGGTGACTACAGCAAGGGACCAGGCTCACTTCTCTaGACTTCCTGTCTTACTAGG +
Preference number: 4 (lower is better)
Translates to: SRNKRKTLACSLGDYSKGPGSLL*TSCLTR
Trigger: CCTAGTAAGACAGGAAGTTCAGAGAAGTGAGCCTGG...TCCCTTGCTGTAGTCACCAAGAGAGCATGCTAGTGTTTTCCTCTTGTTCCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR GCA 90 bp GATCTCTCAGCTCTGTCAGCTAACATTTCCCCAAACTTATTCTACAATGTTTCCGACAGCGACGGAGGCTaGTCTGCTTCCTCCCGAGTA +
Preference number: 4 (lower is better)
Translates to: DLSALSANISPNLFYNVSDSDGG*SASSRV
Trigger: TACTCGGGAGGAAGCAGAGCAGCCTCCGTCGCTGTC...GGAAACATTGTAGAATAAGTTTGGGGAAATGTTAGCTGACAGAGCTGAGAGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp TCGGTGCAAAGCAGACTAGAAATACTGCTCATATTTATTCTCGCTGGAAAAAGTTGCCGGAGCTCCACCTaGAGGACCTCGACTCGTGAG +
Preference number: 4 (lower is better)
Translates to: SVQSRLEILLIFILAGKSCRSST*RTSTRE
Trigger: CTCACGAGTCGAGGTCCTGCAGGTGGAGCTCCGGCA...ACTTTTTCCAGCGAGAATAAATATGAGCAGTATTTCTAGTCTGCTTTGCACCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR GCA 90 bp AGGGTTCCTATTAAGTTAATACAATATCAAGTTTCACTGCCCGATTGCCTTACATTCAACCAGGGCGGCTaGCGGAGCTCCACCTGCAGG +
Preference number: 4 (lower is better)
Translates to: RVPIKLIQYQVSLPDCLTFNQGG*RSSTCR
Trigger: CCTGCAGGTGGAGCTCCGGCAGCCGCCCTGGTTGAA...TGTAAGGCAATCGGGCAGTGAAACTTGATATTGTATTAACTTAATAGGAACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432176.7
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp CTTGGAGACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAACCAAACTGCTCCTCTCCACTaGGATAGAATTCAAAGAGCT +
Preference number: 4 (lower is better)
Translates to: LGDYKRKTYWHLSQPHNQTAPLH*DRIQRA
Trigger: AGCTCTTTGAATTCTATCGCAGTGGAGAGGAGCAGT...TTGGTTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTCTCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
CDS-3UTR GCA 90 bp CTTCTTGGAGACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAACAACAGTTCCCATACATaGAGACTCCCTTTGACTCTG +
Preference number: 4 (lower is better)
Translates to: LLGDYKRKTYWHLSQPHNNSSHT*RLPLTL
Trigger: CAGAGTCAAAGGGAGTCTGCATGTATGGGAACTGTT...GTTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTCTCCAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp ACATCAGGGCTCCTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAAACTCAGCCTCAGCCGTaGTTTCTCTCTCTCACTCTG +
Preference number: 4 (lower is better)
Translates to: TSGLLSGIRMKDPGYFHKTQPQP*FLSLTL
Trigger: CAGAGTGAGAGAGAGAAAGCACGGCTGAGGCTGAGT...TTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAGGAGCCCTGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp TCAGGGCTCCTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAAGAAACTCAGCCTCAGCCGTaGTTTCTCTCTCTCACTCTG +
Preference number: 4 (lower is better)
Translates to: SGLLSGIRMKDPGYFHKETQPQP*FLSLTL
Trigger: CAGAGTGAGAGAGAGAAAGCACGGCTGAGGCTGAGT...TTCTTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAGGAGCCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp CCTTCAGAATTTAAGACATCAGGGCTCCTGTCAGGAATACGGATGAAAGACCCAACTCAGCCTCAGCCGTaGTTTCTCTCTCTCACTCTG +
Preference number: 4 (lower is better)
Translates to: PSEFKTSGLLSGIRMKDPTQPQP*FLSLTL
Trigger: CAGAGTGAGAGAGAGAAAGCACGGCTGAGGCTGAGT...TGGGTCTTTCATCCGTATTCCTGACAGGAGCCCTGATGTCTTAAATTCTGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp CATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAAATACTACAGGTGAAGCCCTaGTCACCTGGGCAAACAGCT +
Preference number: 4 (lower is better)
Translates to: HTCRLPLTLKAKHTAIKILQVKP*SPGQTA
Trigger: AGCTGTTTGCCCAGGTGAGCAGGGCTTCACCTGTAG...TATTTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR GCA 90 bp TATCTGGTCACCCTCAGATGTTGTATCTTAGGATGGTCACTGCTGCTGGCCAGTATAGGCATAAGCCACTaGGCCTGGCCTAGATTTTCA +
Preference number: 4 (lower is better)
Translates to: YLVTLRCCILGWSLLLASIGISH*AWPRFS
Trigger: TGAAAATCTAGGCCAGGCGCAGTGGCTTATGCCTAT...ACTGGCCAGCAGCAGTGACCATCCTAAGATACAACATCTGAGGGTGACCAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CCA 90 bp GACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAACCAACAGCAGACTGAAGAGAAACACTaGGCATGTAAGTTAAGGCAG +
Preference number: 4 (lower is better)
Translates to: DYKRKTYWHLSQPHNQQQTEEKH*ACKLRQ
Trigger: CTGCCTTAACTTACATGCCCAGTGTTTCTCTTCAGT...CTGCTGTTGGTTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp TTCCTCCAGTTTTGCTTCCTCCTGACCGTCTGTGGTTCTTTCCTATACTTGGCTTTGCCTCCTGATCTCTaGCAAGCCTTTGCTCTCAGT +
Preference number: 4 (lower is better)
Translates to: FLQFCFLLTVCGSFLYLALPPDL*QAFALS
Trigger: ACTGAGAGCAAAGGCTTGCCAGAGATCAGGAGGCAA...AGCCAAGTATAGGAAAGAACCACAGACGGTCAGGAGGAAGCAAAACTGGAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409923.5
ENST00000440481.6
CDS-3UTR CCA 90 bp TCCCATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAATTTGATAAACCCGACTaGCTGGTACTAGACGCAGCC +
Preference number: 4 (lower is better)
Translates to: SHTCRLPLTLKAKHTAIKFDKPD*LVLDAA
Trigger: GGCTGCGTCTAGTACCAGCCAGTCGGGTTTATCAAA...TTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CCA 90 bp GTCACAGTGAAAAAGAGCCAAGAACTGGACAGCTCCTTAGGTCTTCCTCAACGGGTCTTAGCCAAACCATaGCTACTAGGCTTAGGTAGG +
Preference number: 4 (lower is better)
Translates to: VTVKKSQELDSSLGLPQRVLAKP*LLGLGR
Trigger: CCTACCTAAGCCTAGTAGCCATGGTTTGGCTAAGAC...CCGTTGAGGAAGACCTAAGGAGCTGTCCAGTTCTTGGCTCTTTTTCACTGTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp CTTTTCCTCCAGTTTTGCTTCCTCCTGACCGTCTGTGGTTCTTTCCTATACTTGAAGCGGAAAACCTATTaGCATCTGTCCCAGCCCCAC +
Preference number: 4 (lower is better)
Translates to: LFLQFCFLLTVCGSFLYLKRKTY*HLSQPH
Trigger: GTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTT...CAAGTATAGGAAAGAACCACAGACGGTCAGGAGGAAGCAAAACTGGAGGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp GGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTAGGCTTGAGCTAGAGAATTCCTaGAGTTGTGCCTCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: GFTKYSRCGLSQTMATRLELENS*SCASAP
Trigger: TGGGGCAGAGGCACAACTCCAGGAATTCTCTAGCTC...AAGCCTAGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp ACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAAATAGGAGAGCTAGAGAATTCCTaGAGTTGTGCCTCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: TCRLPLTLKAKHTAIKIGELENS*SCASAP
Trigger: TGGGGCAGAGGCACAACTCCAGGAATTCTCTAGCTC...TCCTATTTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CCA 90 bp TCAGGGGAGCCTTCAGAATTTAAGACATCAGGGCTCCTGTCAGGAATACGGATGTGCCTGTTTTCAGATTaGCTTCCTGACCAGGAGCTA +
Preference number: 4 (lower is better)
Translates to: SGEPSEFKTSGLLSGIRMCLFSD*LPDQEL
Trigger: TAGCTCCTGGTCAGGAAGCCAATCTGAAAACAGGCA...CATCCGTATTCCTGACAGGAGCCCTGATGTCTTAAATTCTGAAGGCTCCCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CCA 90 bp TTGGAGACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAACCAACAATACTCCAGGCCGTTaGGTTTTCAAATGTGAGAGG +
Preference number: 4 (lower is better)
Translates to: LETTSGKPIGICPSPTTNNTPGR*VFKCER
Trigger: CCTCTCACATTTGAAAACCCAACGGCCTGGAGTATT...GTTGGTTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTCTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000440481.6
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp TCCCATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAATTGCCCTGGGTAGTCTaGGACAGTCCCTTGAAAAGT +
Preference number: 4 (lower is better)
Translates to: SHTCRLPLTLKAKHTAIKLPWVV*DSPLKS
Trigger: ACTTTTCAAGGGACTGTCCCAGACTACCCAGGGCAA...TTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp ATAAAGTCAGGGGAGCCTTCAGAATTTAAGACATCAGGGCTCCTGTCAGGAATAGGAAGACATTTGCCCTaGGTAGTCTGGGACAGTCCC +
Preference number: 4 (lower is better)
Translates to: IKSGEPSEFKTSGLLSGIGRHLP*VVWDSP
Trigger: GGGACTGTCCCAGACTACCCAGGGCAAATGTCTTCC...TATTCCTGACAGGAGCCCTGATGTCTTAAATTCTGAAGGCTCCCCTGACTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp AACCGCTGTGCAGTCACAGTGAAAAAGAGCCAAGAACTGGACAGCTCCTTAGGTAGAATCCTTTGCCTGTaGAATCACACAGGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: NRCAVTVKKSQELDSSLGRILCL*NHTGCG
Trigger: ACCACAGCCTGTGTGATTCCACAGGCAAAGGATTCT...ACCTAAGGAGCTGTCCAGTTCTTGGCTCTTTTTCACTGTGACTGCACAGCGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR TCA 90 bp ACAAGATACCAGATAATGCCAATCCTACTTACTGGTCCTCAGACCACACAGCTACACATTTCTGCTGGCTaGGACTGCAAGGTAGCACCA +
Preference number: 4 (lower is better)
Translates to: TRYQIMPILLTGPQTTQLHISAG*DCKVAP
Trigger: TGGTGCTACCTTGCAGTCTCAGCCAGCAGAAATGTG...TAGCTGTGTGGTCTGAGGACCAGTAAGTAGGATTGGCATTATCTGGTATCTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681402.1
CDS-3UTR TCA 90 bp ATAAAGTCAGGGGAGCCTTCAGAATTTAAGACATCAGGGCTCCTGTCAGGAATACACATTTCTGCTGGCTaGGACTGCAAGGTAGCACCA +
Preference number: 4 (lower is better)
Translates to: IKSGEPSEFKTSGLLSGIHISAG*DCKVAP
Trigger: TGGTGCTACCTTGCAGTCTCAGCCAGCAGAAATGTG...TATTCCTGACAGGAGCCCTGATGTCTTAAATTCTGAAGGCTCCCCTGACTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR TCA 90 bp TTGGAGACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAACCAACACAAATTTGACACAGTaGCTGAAGAGAAACACTGGG +
Preference number: 4 (lower is better)
Translates to: LETTSGKPIGICPSPTTNTNLTQ*LKRNTG
Trigger: CCCAGTGTTTCTCTTCAGTCACTGTGTCAAATTTGT...GTTGGTTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTCTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp CTGTTTTCAGATTGGCTTCCTGACCAGGAGCTAGAGAATTCCTGGAGTTGTGCCTTGCACCATGAATCCTaGAGAAACTGGTATCCTGCT +
Preference number: 4 (lower is better)
Translates to: LFSDWLPDQELENSWSCALHHES*RNWYPA
Trigger: AGCAGGATACCAGTTTCTTCAGGATTCATGGTGCAA...GGCACAACTCCAGGAATTCTCTAGCTCCTGGTCAGGAAGCCAATCTGAAAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR TCA 90 bp TATCTGGTCACCCTCAGATGTTGTATCTTAGGATGGTCACTGCTGCTGGCCAGTTCATCCAGTGCTTTTTaGGCTAGATCCCATTCTCCA +
Preference number: 4 (lower is better)
Translates to: YLVTLRCCILGWSLLLASSSSAF*ARSHSP
Trigger: TGGAGAATGGGATCTAGCTCAAAAAGCACTGGATGA...ACTGGCCAGCAGCAGTGACCATCCTAAGATACAACATCTGAGGGTGACCAGATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR TCA 90 bp AACCGCTGTGCAGTCACAGTGAAAAAGAGCCAAGAACTGGACAGCTCCTTAGGTTCATCCAGTGCTTTTTaGGCTAGATCCCATTCTCCA +
Preference number: 4 (lower is better)
Translates to: NRCAVTVKKSQELDSSLGSSSAF*ARSHSP
Trigger: TGGAGAATGGGATCTAGCTCAAAAAGCACTGGATGA...ACCTAAGGAGCTGTCCAGTTCTTGGCTCTTTTTCACTGTGACTGCACAGCGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp TCTTCTTGGAGACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAATCATCCAGTGCTTTTTaGGCTAGATCCCATTCTCCA +
Preference number: 4 (lower is better)
Translates to: SSWRLQAENLLASVPAPQSSSAF*ARSHSP
Trigger: TGGAGAATGGGATCTAGCTCAAAAAGCACTGGATGA...TTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTCTCCAAGAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp GGGCTCCTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAAGAAGCAGGGACCATGAGGCAATaGAGCCTTTATTGCATTAGC +
Preference number: 4 (lower is better)
Translates to: GLLSGIRMKDPGYFHKEAGTMRQ*SLYCIS
Trigger: GCTAATGCAATAAAGGCTTCATTGCCTCATGGTCCC...TGCTTCTTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAGGAGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR TCA 90 bp CTTCTTGGAGACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAACGGTGTGATTTCAACTTaGATACACCTTGTACCTTCC +
Preference number: 4 (lower is better)
Translates to: LLGDYKRKTYWHLSQPHNGVIST*IHLVPS
Trigger: GGAAGGTACAAGGTGTATTCAAGTTGAAATCACACC...GTTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTCTCCAAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp CTTTTCCTCCAGTTTTGCTTCCTCCTGACCGTCTGTGGTTCTTTCCTATACTTGAGTTTTGCTTCCTCCTaGCCGTCTGTGGTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: LFLQFCFLLTVCGSFLYLSFASS*PSVVLS
Trigger: GGAAAGAACCACAGACGGTCAGGAGGAAGCAAAACT...CAAGTATAGGAAAGAACCACAGACGGTCAGGAGGAAGCAAAACTGGAGGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp TCAGGGCTCCTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAAGAAAGTTTTGCTTCCTCCTaGCCGTCTGTGGTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: SGLLSGIRMKDPGYFHKESFASS*PSVVLS
Trigger: GGAAAGAACCACAGACGGTCAGGAGGAAGCAAAACT...TTCTTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAGGAGCCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR TCA 90 bp GTCACAGTGAAAAAGAGCCAAGAACTGGACAGCTCCTTAGGTCTTCCTCAACGGTCACTTTGGGCTCTCTaGGTTTGTTTTCGAGCAAAG +
Preference number: 4 (lower is better)
Translates to: VTVKKSQELDSSLGLPQRSLWAL*VCFRAK
Trigger: CTTTGCTCGAAAACAAACTCAGAGAGCCCAAAGTGA...CCGTTGAGGAAGACCTAAGGAGCTGTCCAGTTCTTGGCTCTTTTTCACTGTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp TCAGGGGAGCCTTCAGAATTTAAGACATCAGGGCTCCTGTCAGGAATACGGATGTCACTTTGGGCTCTCTaGGTTTGTTTTCGAGCAAAG +
Preference number: 4 (lower is better)
Translates to: SGEPSEFKTSGLLSGIRMSLWAL*VCFRAK
Trigger: CTTTGCTCGAAAACAAACTCAGAGAGCCCAAAGTGA...CATCCGTATTCCTGACAGGAGCCCTGATGTCTTAAATTCTGAAGGCTCCCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR TCA 90 bp TTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTAGGCTTAGGACAACCAACAGCAGATaGCGGGTTATGTGGGACTGT +
Preference number: 4 (lower is better)
Translates to: FTKYSRCGLSQTMATRLRTTNSR*RVMWDC
Trigger: ACAGTCCCACATAACCCGTCATCTGCTGTTGGTTGT...CCTAAGCCTAGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp TCAGGGCTCCTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAAGAAACAACCAACAGCAGATaGCGGGTTATGTGGGACTGT +
Preference number: 4 (lower is better)
Translates to: SGLLSGIRMKDPGYFHKETTNSR*RVMWDC
Trigger: ACAGTCCCACATAACCCGTCATCTGCTGTTGGTTGT...TTCTTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAGGAGCCCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR TCA 90 bp GCCCCACAACCAACAGCAGATGACGGGTTATGTGGGACTGTGACACCACTGACTCATTTTCCAGGGCTTTaGGCAAATTGTTCTAATCAT +
Preference number: 4 (lower is better)
Translates to: APQPTADDGLCGTVTPLTHFPGL*ANCSNH
Trigger: ATGATTAGAACAATTTGCTCAAAGCCCTGGAAAATG...AGTCAGTGGTGTCACAGTCCCACATAACCCGTCATCTGCTGTTGGTTGTGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp ATTTCCATAGTGGTATACAAAGGACTCCAGGGTGCTTTCCTGTGGCTTCAGGAATACAGCAAGGGACTATaGAGAAGGAAACCGCTGTGC +
Preference number: 4 (lower is better)
Translates to: ISIVVYKGLQGAFLWLQEYSKGL*RRKPLC
Trigger: GCACAGCGGTTTCCTTCTTCATAGTCCCTTGCTGTA...TTCCTGAAGCCACAGGAAAGCACCCTGGAGTCCTTTGTATACCACTATGGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp ACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAAATAGGAAGCATGCTCTCTTGGTaGCTACAGCAAGGGACTATG +
Preference number: 4 (lower is better)
Translates to: TCRLPLTLKAKHTAIKIGSMLSW*LQQGTM
Trigger: CATAGTCCCTTGCTGTAGTCACCAAGAGAGCATGCT...TCCTATTTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp TTTCCAAAGTCCAGCAGTAGGGTAAATCAGCTTTACAGCCTATTATACCTTAATCGACGGAGGCTGCTCTaGTTCCTCCCGAGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: FPKSSSRVNQLYSLLYLNRRRLL*FLPSSS
Trigger: GCTGCTACTCGGGAGGAAGCAGAGCAGCCTCCGTCG...ATTAAGGTATAATAGGCTGTAAAGCTGATTTACCCTACTGCTGGACTTTGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR GCA 90 bp GTGAGACCACTGGGAATTCTACATATTAGACGAGTAATTTGTTTGCACTCTGATGACAGCGACGGAGGCTaGTCTGCTTCCTCCCGAGTA +
Preference number: 4 (lower is better)
Translates to: VRPLGILHIRRVICLHSDDSDGG*SASSRV
Trigger: TACTCGGGAGGAAGCAGAGCAGCCTCCGTCGCTGTC...ATCAGAGTGCAAACAAATTACTCGTCTAATATGTAGAATTCCCAGTGGTCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp CCAGGAGCTAGAGAATTCCTGGAGTTGTGCCTCTGCCCCATTCTCTATAAAACATGCTATGCACATTTCTaGTGGCTGAGACTGCAAGGT +
Preference number: 4 (lower is better)
Translates to: PGAREFLELCLCPILYKTCYAHF*WLRLQG
Trigger: ACCTTGCAGTCTCAGCCAGCAGAAATGTGCATAGCA...TGTTTTATAGAGAATGGGGCAGAGGCACAACTCCAGGAATTCTCTAGCTCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR GCA 90 bp TTCCTCCAGTTTTGCTTCCTCCTGACCGTCTGTGGTTCTTTCCTATACTTGGCTTGCTATGCACATTTCTaGTGGCTGAGACTGCAAGGT +
Preference number: 4 (lower is better)
Translates to: FLQFCFLLTVCGSFLYLACYAHF*WLRLQG
Trigger: ACCTTGCAGTCTCAGCCAGCAGAAATGTGCATAGCA...AGCCAAGTATAGGAAAGAACCACAGACGGTCAGGAGGAAGCAAAACTGGAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681402.1
CDS-3UTR GCA 90 bp TCCCATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAAGAGCCATGGACCCAATaGTGGAAGGTTCATGGTATA +
Preference number: 4 (lower is better)
Translates to: SHTCRLPLTLKAKHTAIKEPWTQ*WKVHGI
Trigger: TATACCATGAACCTTCCAGCATTGGGTCCATGGCTC...TTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR GCA 90 bp TCAGGGGAGCCTTCAGAATTTAAGACATCAGGGCTCCTGTCAGGAATACGGATGTTCAAACCGATTCTGTaGTGTCAGCATCTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: SGEPSEFKTSGLLSGIRMFKPIL*CQHLPL
Trigger: CAAAGGGAGATGCTGACAGCACAGAATCGGTTTGAA...CATCCGTATTCCTGACAGGAGCCCTGATGTCTTAAATTCTGAAGGCTCCCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR GCA 90 bp TTGGAGACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAACCAACGACCCCTTATTGACATaGTGGTTACTGCATTTCTTG +
Preference number: 4 (lower is better)
Translates to: LETTSGKPIGICPSPTTNDPLLT*WLLHFL
Trigger: CAAGAAATGCAGTAACCAGCATGTCAATAAGGGGTC...GTTGGTTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTCTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp TCTTGGAGACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAACCAGACCCCTTATTGACATaGTGGTTACTGCATTTCTTG +
Preference number: 4 (lower is better)
Translates to: SWRLQAENLLASVPAPQPDPLLT*WLLHFL
Trigger: CAAGAAATGCAGTAACCAGCATGTCAATAAGGGGTC...TGGTTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTCTCCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp TCAGGGGAGCCTTCAGAATTTAAGACATCAGGGCTCCTGTCAGGAATACGGATGACTAAATACAGTCGCTaGGGTCTTAGCCAAACCATG +
Preference number: 4 (lower is better)
Translates to: SGEPSEFKTSGLLSGIRMTKYSR*GLSQTM
Trigger: CATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGT...CATCCGTATTCCTGACAGGAGCCCTGATGTCTTAAATTCTGAAGGCTCCCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR GCA 90 bp AACAGTTCCCATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCAACAGTTCCCATACATaGAGACTCCCTTTGACTCTG +
Preference number: 4 (lower is better)
Translates to: NSSHTCRLPLTLKAKHTANSSHT*RLPLTL
Trigger: CAGAGTCAAAGGGAGTCTGCATGTATGGGAACTGTT...GGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATGGGAACTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR GCA 90 bp ATTTCCATAGTGGTATACAAAGGACTCCAGGGTGCTTTCCTGTGGCTTCAGGAAATAATCCGCCACTGGTaGATGGCCCATAGAGCTCAT +
Preference number: 4 (lower is better)
Translates to: ISIVVYKGLQGAFLWLQEIIRHW*MAHRAH
Trigger: ATGAGCTCTATGGGCCATGCACCAGTGGCGGATTAT...TTCCTGAAGCCACAGGAAAGCACCCTGGAGTCCTTTGTATACCACTATGGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR GCA 90 bp GATGACGGGTTATGTGGGACTGTGACACCACTGACTTGTTCAAAGGATTTACTAACTCAGCCTCAGCCGTaGTTTCTCTCTCTCACTCTG +
Preference number: 4 (lower is better)
Translates to: DDGLCGTVTPLTCSKDLLTQPQP*FLSLTL
Trigger: CAGAGTGAGAGAGAGAAAGCACGGCTGAGGCTGAGT...TAGTAAATCCTTTGAACAAGTCAGTGGTGTCACAGTCCCACATAACCCGTCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440481.6
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp ACAAGATACCAGATAATGCCAATCCTACTTACTGGTCCTCAGACCACACAGCTACAAAGGACTCCAGGGTaGTTTCCTGTGGCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: TRYQIMPILLTGPQTTQLQRTPG*FPVASG
Trigger: TCCTGAAGCCACAGGAAAGCACCCTGGAGTCCTTTG...TAGCTGTGTGGTCTGAGGACCAGTAAGTAGGATTGGCATTATCTGGTATCTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp ACTGTGACACCACTGACTTGTTCAAAGGATTTACTAAATACAGTCGCTGCGGTCCAAAGGACTCCAGGGTaGTTTCCTGTGGCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: TVTPLTCSKDLLNTVAAVQRTPG*FPVASG
Trigger: TCCTGAAGCCACAGGAAAGCACCCTGGAGTCCTTTG...GACCGCAGCGACTGTATTTAGTAAATCCTTTGAACAAGTCAGTGGTGTCACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440481.6
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp TCCCATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAACCATGGACCCAATGCTaGAAGGTTCATGGTATACAG +
Preference number: 4 (lower is better)
Translates to: SHTCRLPLTLKAKHTAIKPWTQC*KVHGIQ
Trigger: CTGTATACCATGAACCTTCCAGCATTGGGTCCATGG...TTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CCA 90 bp CTGTTTTCAGATTGGCTTCCTGACCAGGAGCTAGAGAATTCCTGGAGTTGTGCCTTTGACAAACCATGCTaGGATAGTGCACTCTCAGTC +
Preference number: 4 (lower is better)
Translates to: LFSDWLPDQELENSWSCAFDKPC*DSALSV
Trigger: GACTGAGAGTGCACTATCCCAGCATGGTTTGTCAAA...GGCACAACTCCAGGAATTCTCTAGCTCCTGGTCAGGAAGCCAATCTGAAAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CCA 90 bp TCTTCTTGGAGACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAATTTGACAAACCATGCTaGGATAGTGCACTCTCAGTC +
Preference number: 4 (lower is better)
Translates to: SSWRLQAENLLASVPAPQFDKPC*DSALSV
Trigger: GACTGAGAGTGCACTATCCCAGCATGGTTTGTCAAA...TTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTCTCCAAGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp CTTGGAGACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAACCAAACTGAAGAGAAACACTaGGCATGTAAGTTAAGGCAG +
Preference number: 4 (lower is better)
Translates to: LGDYKRKTYWHLSQPHNQTEEKH*ACKLRQ
Trigger: CTGCCTTAACTTACATGCCCAGTGTTTCTCTTCAGT...TTGGTTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTCTCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp TTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTAGGCTTAGGTTTGATAAACCCGACTaGCTGGTACTAGACGCAGCC +
Preference number: 4 (lower is better)
Translates to: FTKYSRCGLSQTMATRLRFDKPD*LVLDAA
Trigger: GGCTGCGTCTAGTACCAGCCAGTCGGGTTTATCAAA...CCTAAGCCTAGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp ACATCAGGGCTCCTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAACCTCCTGACCGTCTGTaGTTCTTTCCTATACTTGGC +
Preference number: 4 (lower is better)
Translates to: TSGLLSGIRMKDPGYFHKPPDRL*FFPILG
Trigger: GCCAAGTATAGGAAAGAACCACAGACGGTCAGGAGG...TTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAGGAGCCCTGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CCA 90 bp CATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAAATAAAGCGGAAAACCTATTaGCATCTGTCCCAGCCCCAC +
Preference number: 4 (lower is better)
Translates to: HTCRLPLTLKAKHTAIKIKRKTY*HLSQPH
Trigger: GTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTT...TATTTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CCA 90 bp CTCTCTCTCACTCTGAATGATGACTTAAGTACATTTGCTTTACAGGGGAACCGCAAGCGGAAAACCTATTaGCATCTGTCCCAGCCCCAC +
Preference number: 4 (lower is better)
Translates to: LSLTLNDDLSTFALQGNRKRKTY*HLSQPH
Trigger: GTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTT...GCGGTTCCCCTGTAAAGCAAATGTACTTAAGTCATCATTCAGAGTGAGAGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp CATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAAATAGAGCTAGAGAATTCCTaGAGTTGTGCCTCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: HTCRLPLTLKAKHTAIKIELENS*SCASAP
Trigger: TGGGGCAGAGGCACAACTCCAGGAATTCTCTAGCTC...TATTTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CCA 90 bp ATAAAACAGTTCCCATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACGAGCTAGAGAATTCCTaGAGTTGTGCCTCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: IKQFPYMQTPFDSEGQTHELENS*SCASAP
Trigger: TGGGGCAGAGGCACAACTCCAGGAATTCTCTAGCTC...GTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATGGGAACTGTTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CCA 90 bp CCAGGAGCTAGAGAATTCCTGGAGTTGTGCCTCTGCCCCATTCTCTATAAAACATGCCTGTTTTCAGATTaGCTTCCTGACCAGGAGCTA +
Preference number: 4 (lower is better)
Translates to: PGAREFLELCLCPILYKTCLFSD*LPDQEL
Trigger: TAGCTCCTGGTCAGGAAGCCAATCTGAAAACAGGCA...TGTTTTATAGAGAATGGGGCAGAGGCACAACTCCAGGAATTCTCTAGCTCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CCA 90 bp ACTAACTATCTGGTCACCCTCAGATGTTGTATCTTAGGATGGTCACTGCTGCTGGCCAATCCTACTTACTaGTCCTCAGACCACACAGCT +
Preference number: 4 (lower is better)
Translates to: TNYLVTLRCCILGWSLLLANPTY*SSDHTA
Trigger: AGCTGTGTGGTCTGAGGACCAGTAAGTAGGATTGGC...CAGCAGCAGTGACCATCCTAAGATACAACATCTGAGGGTGACCAGATAGTTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CCA 90 bp ACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAAATAGGAGCCAATCCTACTTACTaGTCCTCAGACCACACAGCT +
Preference number: 4 (lower is better)
Translates to: TCRLPLTLKAKHTAIKIGANPTY*SSDHTA
Trigger: AGCTGTGTGGTCTGAGGACCAGTAAGTAGGATTGGC...TCCTATTTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp CTTTTCCTCCAGTTTTGCTTCCTCCTGACCGTCTGTGGTTCTTTCCTATACTTGTTGCCCTGGGTAGTCTaGGACAGTCCCTTGAAAAGT +
Preference number: 4 (lower is better)
Translates to: LFLQFCFLLTVCGSFLYLLPWVV*DSPLKS
Trigger: ACTTTTCAAGGGACTGTCCCAGACTACCCAGGGCAA...CAAGTATAGGAAAGAACCACAGACGGTCAGGAGGAAGCAAAACTGGAGGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000440481.6
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp GTCTCTTCAAAGAGAGAAGCTCAAGATTCTCACTTTGGGCTCTCTGAGTTTGTTCAGGGTGCTTTCCTGTaGCTTCAGGAAGGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: VSSKREAQDSHFGLSEFVQGAFL*LQEGKG
Trigger: TCCCTTCCCTTCCTGAAGCCACAGGAAAGCACCCTG...AACAAACTCAGAGAGCCCAAAGTGAGAATCTTGAGCTTCTCTCTTTGAAGAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440481.6
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp AAATGTTTCAGAGATAACAACAGAAATGCCTCTAGCCATCCCCTGGAATCATATGATGGTCACTGCTGCTaGCCAGTTCGGCTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: KCFRDNNRNASSHPLESYDGHCC*PVRLLA
Trigger: TGCCAGGAGCCGAACTGGCCAGCAGCAGTGACCATC...ATATGATTCCAGGGGATGGCTAGAGGCATTTCTGTTGTTATCTCTGAAACATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR TCA 90 bp CTTCTTGGAGACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAACCACAACCCCTTTCTCTaGAGTAAACATTTTTCCACA +
Preference number: 4 (lower is better)
Translates to: LLGDYKRKTYWHLSQPHNHNPFL*SKHFST
Trigger: TGTGGAAAAATGTTTACTTCAGAGAAAGGGGTTGTG...GTTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTCTCCAAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp GTCACAGTGAAAAAGAGCCAAGAACTGGACAGCTCCTTAGGTCTTCCTCAACGGACAAATTTGACACAGTaGCTGAAGAGAAACACTGGG +
Preference number: 4 (lower is better)
Translates to: VTVKKSQELDSSLGLPQRTNLTQ*LKRNTG
Trigger: CCCAGTGTTTCTCTTCAGTCACTGTGTCAAATTTGT...CCGTTGAGGAAGACCTAAGGAGCTGTCCAGTTCTTGGCTCTTTTTCACTGTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp AACAGTTCCCATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCACAAATTTGACACAGTaGCTGAAGAGAAACACTGGG +
Preference number: 4 (lower is better)
Translates to: NSSHTCRLPLTLKAKHTATNLTQ*LKRNTG
Trigger: CCCAGTGTTTCTCTTCAGTCACTGTGTCAAATTTGT...GGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATGGGAACTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR TCA 90 bp AGCAGGAACAAGAGGAAAACACTAGCATGCTCTCTTGGTGACTACAGCAAGGGATTGCACCATGAATCCTaGAGAAACTGGTATCCTGCT +
Preference number: 4 (lower is better)
Translates to: SRNKRKTLACSLGDYSKGLHHES*RNWYPA
Trigger: AGCAGGATACCAGTTTCTTCAGGATTCATGGTGCAA...TCCCTTGCTGTAGTCACCAAGAGAGCATGCTAGTGTTTTCCTCTTGTTCCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp TCCTTAGGTCTTCCTCAACGGTCAACTGACTCAGCCTCAGCCGTGCTTTCTCTCTTAACATTTGCACCATaGATCCTGAAGAAACTGGTA +
Preference number: 4 (lower is better)
Translates to: SLGLPQRSTDSASAVLSLLTFAP*ILKKLV
Trigger: TACCAGTTTCTTCAGGATTCATGGTGCAAATGTTAA...GAGAGAAAGCACGGCTGAGGCTGAGTCAGTTGACCGTTGAGGAAGACCTAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp TTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTAGGCTTAGGTGGGACCATGAGGCAATaGAGCCTTTATTGCATTAGC +
Preference number: 4 (lower is better)
Translates to: LLNTVAAVLAKPWLLGLGGTMRQ*SLYCIS
Trigger: GCTAATGCAATAAAGGCTTCATTGCCTCATGGTCCC...ACCTAAGCCTAGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp ACTAACTATCTGGTCACCCTCAGATGTTGTATCTTAGGATGGTCACTGCTGCTGGGGACCATGAGGCAATaGAGCCTTTATTGCATTAGC +
Preference number: 4 (lower is better)
Translates to: TNYLVTLRCCILGWSLLLGTMRQ*SLYCIS
Trigger: GCTAATGCAATAAAGGCTTCATTGCCTCATGGTCCC...CAGCAGCAGTGACCATCCTAAGATACAACATCTGAGGGTGACCAGATAGTTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR TCA 90 bp CTGTTTTCAGATTGGCTTCCTGACCAGGAGCTAGAGAATTCCTGGAGTTGTGCCGGTTACTGCATTTCTTaGTATTCGAGAGGAAGTTGG +
Preference number: 4 (lower is better)
Translates to: LFSDWLPDQELENSWSCAGYCIS*YSRGSW
Trigger: CCAACTTCCTCTCGAATATCAAGAAATGCAGTAACC...GGCACAACTCCAGGAATTCTCTAGCTCCTGGTCAGGAAGCCAATCTGAAAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR TCA 90 bp GTCACAGTGAAAAAGAGCCAAGAACTGGACAGCTCCTTAGGTCTTCCTCAACGGGGTTACTGCATTTCTTaGTATTCGAGAGGAAGTTGG +
Preference number: 4 (lower is better)
Translates to: VTVKKSQELDSSLGLPQRGYCIS*YSRGSW
Trigger: CCAACTTCCTCTCGAATATCAAGAAATGCAGTAACC...CCGTTGAGGAAGACCTAAGGAGCTGTCCAGTTCTTGGCTCTTTTTCACTGTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp CCAGGAGCTAGAGAATTCCTGGAGTTGTGCCTCTGCCCCATTCTCTATAAAACACCTATGACCCCTTATTaGCATGCTGGTTACTGCATT +
Preference number: 4 (lower is better)
Translates to: PGAREFLELCLCPILYKTPMTPY*HAGYCI
Trigger: AATGCAGTAACCAGCATGTCAATAAGGGGTCATAGG...TGTTTTATAGAGAATGGGGCAGAGGCACAACTCCAGGAATTCTCTAGCTCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR TCA 90 bp AGCAGGAACAAGAGGAAAACACTAGCATGCTCTCTTGGTGACTACAGCAAGGGATGTCTTTTCCACCTATaGCCCCTTATTGACATGCTG +
Preference number: 4 (lower is better)
Translates to: SRNKRKTLACSLGDYSKGCLFHL*PLIDML
Trigger: CAGCATGTCAATAAGGGGTCATAGGTGGAAAAGACA...TCCCTTGCTGTAGTCACCAAGAGAGCATGCTAGTGTTTTCCTCTTGTTCCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp ATAAAGTCAGGGGAGCCTTCAGAATTTAAGACATCAGGGCTCCTGTCAGGAATACAGATTTTTGCCTCCTaGTCTCTGGCAAGCCTTTGC +
Preference number: 4 (lower is better)
Translates to: IKSGEPSEFKTSGLLSGIQIFAS*SLASLC
Trigger: GCAAAGGCTTGCCAGAGATCAGGAGGCAAAAATCTG...TATTCCTGACAGGAGCCCTGATGTCTTAAATTCTGAAGGCTCCCCTGACTTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409923.5
ENST00000440481.6
CDS-3UTR TCA 90 bp AACAGTTCCCATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCTGTTTTCGAGCAAAGTaGTCTTTGCAAGATTCCCCT +
Preference number: 4 (lower is better)
Translates to: NSSHTCRLPLTLKAKHTACFRAK*SLQDSP
Trigger: AGGGGAATCTTGCAAAGATCACTTTGCTCGAAAACA...GGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATGGGAACTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR TCA 90 bp ACAGCAGATGACGGGTTATGTGGGACTGTGACACCACTGACTTGTTCAAAGGATTCACTTTGGGCTCTCTaGGTTTGTTTTCGAGCAAAG +
Preference number: 4 (lower is better)
Translates to: TADDGLCGTVTPLTCSKDSLWAL*VCFRAK
Trigger: CTTTGCTCGAAAACAAACTCAGAGAGCCCAAAGTGA...ATCCTTTGAACAAGTCAGTGGTGTCACAGTCCCACATAACCCGTCATCTGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp ATAAAACAGTTCCCATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACACAACCAACAGCAGATaGCGGGTTATGTGGGACTGT +
Preference number: 4 (lower is better)
Translates to: IKQFPYMQTPFDSEGQTHTTNSR*RVMWDC
Trigger: ACAGTCCCACATAACCCGTCATCTGCTGTTGGTTGT...GTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATGGGAACTGTTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR TCA 90 bp TTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTAGGCTTAGGTGTCAGGAATACGGATaGAAGACCCAGGGTACTTTC +
Preference number: 4 (lower is better)
Translates to: FTKYSRCGLSQTMATRLRCQEYG*KTQGTF
Trigger: GAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACA...CCTAAGCCTAGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp GACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAACCAACAGCAGCATTTTCCAGGGCTTTaGGCAAATTGTTCTAATCAT +
Preference number: 4 (lower is better)
Translates to: DYKRKTYWHLSQPHNQQQHFPGL*ANCSNH
Trigger: ATGATTAGAACAATTTGCTCAAAGCCCTGGAAAATG...CTGCTGTTGGTTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp TTGCTTTTTCAAAACAAACTTCAGGCATCATTTAAATGCCGAGAATTCCAACTCTCCCCCTCCTCTCACTaGCTGACAACCCAGCCGGGA +
Preference number: 4 (lower is better)
Translates to: LLFQNKLQASFKCREFQLSPSSH*LTTQPG
Trigger: TCCCGGCTGGGTTGTCAGTCAGTGAGAGGAGGGGGA...GAGTTGGAATTCTCGGCATTTAAATGATGCCTGAAGTTTGTTTTGAAAAAGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000681237.1
CDS-3UTR TCA 90 bp AAATGTTTCAGAGATAACAACAGAAATGCCTCTAGCCATCCCCTGGAATCATATTCCTCAACGGTCAACTaGCTCAGCCTCAGCCGTGCT +
Preference number: 4 (lower is better)
Translates to: KCFRDNNRNASSHPLESYSSTVN*LSLSRA
Trigger: AGCACGGCTGAGGCTGAGTCAGTTGACCGTTGAGGA...ATATGATTCCAGGGGATGGCTAGAGGCATTTCTGTTGTTATCTCTGAAACATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp GCAAGATTTACACTGATTTCCAGGAAGTCTTCCAATGACGTATGCTCTGAATTATCCTCAACGGTCAACTaGCTCAGCCTCAGCCGTGCT +
Preference number: 4 (lower is better)
Translates to: ARFTLISRKSSNDVCSELSSTVN*LSLSRA
Trigger: AGCACGGCTGAGGCTGAGTCAGTTGACCGTTGAGGA...TAATTCAGAGCATACGTCATTGGAAGACTTCCTGGAAATCAGTGTAAATCTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp GACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAACCAACAGCAGCAACTCTTCAAGTCTTaGGAGCTTGCCTTAAAAATT +
Preference number: 4 (lower is better)
Translates to: DYKRKTYWHLSQPHNQQQQLFKS*ELALKI
Trigger: AATTTTTAAGGCAAGCTCTCAAGACTTGAAGAGTTG...CTGCTGTTGGTTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000440481.6
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp CCAGGAGCTAGAGAATTCCTGGAGTTGTGCCTCTGCCCCATTCTCTATAAAACAAGGAAGAAAAAGTGGTaGTGCTCTTCCAGAGGGTTT +
Preference number: 4 (lower is better)
Translates to: PGAREFLELCLCPILYKTRKKKW*CSSRGF
Trigger: AAACCCTCTGGAAGAGCATCACCACTTTTTCTTCCT...TGTTTTATAGAGAATGGGGCAGAGGCACAACTCCAGGAATTCTCTAGCTCCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR GCA 90 bp ACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAAATAGGATGCTATGCACATTTCTaGTGGCTGAGACTGCAAGGT +
Preference number: 4 (lower is better)
Translates to: TCRLPLTLKAKHTAIKIGCYAHF*WLRLQG
Trigger: ACCTTGCAGTCTCAGCCAGCAGAAATGTGCATAGCA...TCCTATTTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR GCA 90 bp TCAGGGCTCCTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAAGAATGCTATGCACATTTCTaGTGGCTGAGACTGCAAGGT +
Preference number: 4 (lower is better)
Translates to: SGLLSGIRMKDPGYFHKECYAHF*WLRLQG
Trigger: ACCTTGCAGTCTCAGCCAGCAGAAATGTGCATAGCA...TTCTTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAGGAGCCCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR GCA 90 bp ACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAAATAGGAATGCATCCACTGCTATaGACATTTCTGCTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: TCRLPLTLKAKHTAIKIGMHPLL*TFLLAE
Trigger: CTCAGCCAGCAGAAATGTGCATAGCAGTGGATGCAT...TCCTATTTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR GCA 90 bp TTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTAGGCTTAGGTATGCATCCACTGCTATaGACATTTCTGCTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: LLNTVAAVLAKPWLLGLGMHPLL*TFLLAE
Trigger: CTCAGCCAGCAGAAATGTGCATAGCAGTGGATGCAT...ACCTAAGCCTAGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681402.1
CDS-3UTR GCA 90 bp ATTTCCATAGTGGTATACAAAGGACTCCAGGGTGCTTTCCTGTGGCTTCAGGAAATGCATCCACTGCTATaGACATTTCTGCTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: ISIVVYKGLQGAFLWLQEMHPLL*TFLLAE
Trigger: CTCAGCCAGCAGAAATGTGCATAGCAGTGGATGCAT...TTCCTGAAGCCACAGGAAAGCACCCTGGAGTCCTTTGTATACCACTATGGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681402.1
CDS-3UTR GCA 90 bp TTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTAGGCTTAGGATGCATCCACTGCTATaGACATTTCTGCTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: FTKYSRCGLSQTMATRLRMHPLL*TFLLAE
Trigger: CTCAGCCAGCAGAAATGTGCATAGCAGTGGATGCAT...CCTAAGCCTAGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681402.1
CDS-3UTR GCA 90 bp CCTTCAGAATTTAAGACATCAGGGCTCCTGTCAGGAATACGGATGAAAGACCCAATGCATCCACTGCTATaGACATTTCTGCTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: PSEFKTSGLLSGIRMKDPMHPLL*TFLLAE
Trigger: CTCAGCCAGCAGAAATGTGCATAGCAGTGGATGCAT...TGGGTCTTTCATCCGTATTCCTGACAGGAGCCCTGATGTCTTAAATTCTGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR GCA 90 bp TCCCATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAACTTCAATGCATCCACTaGTATGCACATTTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SHTCRLPLTLKAKHTAIKLQCIH*YAHFCW
Trigger: CCAGCAGAAATGTGCATAGCAGTGGATGCATTGAAG...TTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR GCA 90 bp TCAGGGCTCCTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAAGAAGAGCCATGGACCCAATaGTGGAAGGTTCATGGTATA +
Preference number: 4 (lower is better)
Translates to: SGLLSGIRMKDPGYFHKEEPWTQ*WKVHGI
Trigger: TATACCATGAACCTTCCAGCATTGGGTCCATGGCTC...TTCTTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAGGAGCCCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR GCA 90 bp TTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTAGGCTTAGGTGAGCCATGGACCCAATaGTGGAAGGTTCATGGTATA +
Preference number: 4 (lower is better)
Translates to: LLNTVAAVLAKPWLLGLGEPWTQ*WKVHGI
Trigger: TATACCATGAACCTTCCAGCATTGGGTCCATGGCTC...ACCTAAGCCTAGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp GGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTAGGCTTGAGCCATGGACCCAATaGTGGAAGGTTCATGGTATA +
Preference number: 4 (lower is better)
Translates to: GFTKYSRCGLSQTMATRLEPWTQ*WKVHGI
Trigger: TATACCATGAACCTTCCAGCATTGGGTCCATGGCTC...AAGCCTAGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp AACAGTTCCCATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCGACCCCTTATTGACATaGTGGTTACTGCATTTCTTG +
Preference number: 4 (lower is better)
Translates to: NSSHTCRLPLTLKAKHTADPLLT*WLLHFL
Trigger: CAAGAAATGCAGTAACCAGCATGTCAATAAGGGGTC...GGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATGGGAACTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR GCA 90 bp CCTTCAGAATTTAAGACATCAGGGCTCCTGTCAGGAATACGGATGAAAGACCCACTTTTCCTCCAGTTTTaGTTCCTCCTGACCGTCTGT +
Preference number: 4 (lower is better)
Translates to: PSEFKTSGLLSGIRMKDPLFLQF*FLLTVC
Trigger: ACAGACGGTCAGGAGGAAGCAAAACTGGAGGAAAAG...TGGGTCTTTCATCCGTATTCCTGACAGGAGCCCTGATGTCTTAAATTCTGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR GCA 90 bp ACATCAGGGCTCCTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAACTTTTCCTCCAGTTTTaGTTCCTCCTGACCGTCTGT +
Preference number: 4 (lower is better)
Translates to: TSGLLSGIRMKDPGYFHKLFLQF*FLLTVC
Trigger: ACAGACGGTCAGGAGGAAGCAAAACTGGAGGAAAAG...TTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAGGAGCCCTGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR GCA 90 bp CCAGGAGCTAGAGAATTCCTGGAGTTGTGCCTCTGCCCCATTCTCTATAAAACAACTAAATACAGTCGCTaGGGTCTTAGCCAAACCATG +
Preference number: 4 (lower is better)
Translates to: PGAREFLELCLCPILYKTTKYSR*GLSQTM
Trigger: CATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGT...TGTTTTATAGAGAATGGGGCAGAGGCACAACTCCAGGAATTCTCTAGCTCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR GCA 90 bp CCAGGAGCTAGAGAATTCCTGGAGTTGTGCCTCTGCCCCATTCTCTATAAAACAAACAGTTCCCATACATaGAGACTCCCTTTGACTCTG +
Preference number: 4 (lower is better)
Translates to: PGAREFLELCLCPILYKTNSSHT*RLPLTL
Trigger: CAGAGTCAAAGGGAGTCTGCATGTATGGGAACTGTT...TGTTTTATAGAGAATGGGGCAGAGGCACAACTCCAGGAATTCTCTAGCTCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR GCA 90 bp ACCACTGACTTGTTCAAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAACAAAGGACTCCAGGGTaGTTTCCTGTGGCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: TTDLFKGFTKYSRCGLSQQRTPG*FPVASG
Trigger: TCCTGAAGCCACAGGAAAGCACCCTGGAGTCCTTTG...TTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTTGAACAAGTCAGTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440481.6
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp TCTTGGAGACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAACCACAGGCATCATTTAAATaGCGAGAATTCCAACTCTTC +
Preference number: 4 (lower is better)
Translates to: SWRLQAENLLASVPAPQPQASFK*REFQLF
Trigger: GAAGAGTTGGAATTCTCGGCATTTAAATGATGCCTG...TGGTTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTCTCCAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440481.6
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp TCCCATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAAAGGTGCCCGCCACTATaGCTGGCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: SHTCRLPLTLKAKHTAIKRCPPL*LANFCI
Trigger: AATACAAAAATTAGCCAGGCATAGTGGCGGGCACCT...TTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR GCA 90 bp TCCCATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAATCCCAATCAGTTCCCTaGCTTGACAGACATACCTTA +
Preference number: 4 (lower is better)
Translates to: SHTCRLPLTLKAKHTAIKSQSVP*LDRHTL
Trigger: TAAGGTATGTCTGTCAAGGCAGGGAACTGATTGGGA...TTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR GCA 90 bp GGGCTCCTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAAGAAGCACACACACAAGCATGGTaGTTAGGGAAGGCAAACTTA +
Preference number: 4 (lower is better)
Translates to: GLLSGIRMKDPGYFHKEAHTQAW*LGKANL
Trigger: TAAGTTTGCCTTCCCTAAGCACCATGCTTGTGTGTG...TGCTTCTTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAGGAGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CCA 90 bp ACTGTGACACCACTGACTTGTTCAAAGGATTTACTAAATACAGTCGCTGCGGTCTTGCCTCCTGATCTCTaGCAAGCCTTTGCTCTCAGT +
Preference number: 4 (lower is better)
Translates to: TVTPLTCSKDLLNTVAAVLPPDL*QAFALS
Trigger: ACTGAGAGCAAAGGCTTGCCAGAGATCAGGAGGCAA...GACCGCAGCGACTGTATTTAGTAAATCCTTTGAACAAGTCAGTGGTGTCACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409923.5
ENST00000440481.6
CDS-3UTR CCA 90 bp ACTGTGACACCACTGACTTGTTCAAAGGATTTACTAAATACAGTCGCTGCGGTCTTTGATAAACCCGACTaGCTGGTACTAGACGCAGCC +
Preference number: 4 (lower is better)
Translates to: TVTPLTCSKDLLNTVAAVFDKPD*LVLDAA
Trigger: GGCTGCGTCTAGTACCAGCCAGTCGGGTTTATCAAA...GACCGCAGCGACTGTATTTAGTAAATCCTTTGAACAAGTCAGTGGTGTCACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp GGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTAGGCTTGTCTTAGCCAAACCATaGCTACTAGGCTTAGGTAGG +
Preference number: 4 (lower is better)
Translates to: GFTKYSRCGLSQTMATRLVLAKP*LLGLGR
Trigger: CCTACCTAAGCCTAGTAGCCATGGTTTGGCTAAGAC...AAGCCTAGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp ACATCAGGGCTCCTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAAGTCTTAGCCAAACCATaGCTACTAGGCTTAGGTAGG +
Preference number: 4 (lower is better)
Translates to: TSGLLSGIRMKDPGYFHKVLAKP*LLGLGR
Trigger: CCTACCTAAGCCTAGTAGCCATGGTTTGGCTAAGAC...TTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAGGAGCCCTGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CCA 90 bp CTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAAGAAGCAAAGTTGAAGCGGAAAACCTATTaGCATCTGTCCCAGCCCCAC +
Preference number: 4 (lower is better)
Translates to: LSGIRMKDPGYFHKEAKLKRKTY*HLSQPH
Trigger: GTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTT...CAACTTTGCTTCTTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CCA 90 bp TTCAAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTAAGCGGAAAACCTATTaGCATCTGTCCCAGCCCCAC +
Preference number: 4 (lower is better)
Translates to: FKGFTKYSRCGLSQTMATKRKTY*HLSQPH
Trigger: GTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTT...AGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp TCCTTAGGTCTTCCTCAACGGTCAACTGACTCAGCCTCAGCCGTGCTTTCTCTCATAAGCTTTTCTTCTTaGAGACTACAAGCGGAAAAC +
Preference number: 4 (lower is better)
Translates to: SLGLPQRSTDSASAVLSLISFSS*RLQAEN
Trigger: GTTTTCCGCTTGTAGTCTCCAAGAAGAAAAGCTTAT...GAGAGAAAGCACGGCTGAGGCTGAGTCAGTTGACCGTTGAGGAAGACCTAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp CTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAAGAAGCAAAGTTGGAGCTAGAGAATTCCTaGAGTTGTGCCTCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: LSGIRMKDPGYFHKEAKLELENS*SCASAP
Trigger: TGGGGCAGAGGCACAACTCCAGGAATTCTCTAGCTC...CAACTTTGCTTCTTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CCA 90 bp GATGACGGGTTATGTGGGACTGTGACACCACTGACTTGTTCAAAGGATTTACTAGCCAATCCTACTTACTaGTCCTCAGACCACACAGCT +
Preference number: 4 (lower is better)
Translates to: DDGLCGTVTPLTCSKDLLANPTY*SSDHTA
Trigger: AGCTGTGTGGTCTGAGGACCAGTAAGTAGGATTGGC...TAGTAAATCCTTTGAACAAGTCAGTGGTGTCACAGTCCCACATAACCCGTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440481.6
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp TCCCATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAAAATACTCCAGGCCGTTaGGTTTTCAAATGTGAGAGG +
Preference number: 4 (lower is better)
Translates to: SHTCRLPLTLKAKHTAIKNTPGR*VFKCER
Trigger: CCTCTCACATTTGAAAACCCAACGGCCTGGAGTATT...TTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp ATAAAGTCAGGGGAGCCTTCAGAATTTAAGACATCAGGGCTCCTGTCAGGAATATCCCAGCCCAAAGCATaGGAATTTCCTAAGCCCTCT +
Preference number: 4 (lower is better)
Translates to: IKSGEPSEFKTSGLLSGISQPKA*EFPKPS
Trigger: AGAGGGCTTAGGAAATTCCCATGCTTTGGGCTGGGA...TATTCCTGACAGGAGCCCTGATGTCTTAAATTCTGAAGGCTCCCCTGACTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CCA 90 bp ATTTCCATAGTGGTATACAAAGGACTCCAGGGTGCTTTCCTGTGGCTTCAGGAAAAGGGGAAAAGGACATaGGGTGAAGTCCAGAGGAAA +
Preference number: 4 (lower is better)
Translates to: ISIVVYKGLQGAFLWLQEKGKRT*GEVQRK
Trigger: TTTCCTCTGGACTTCACCCCATGTCCTTTTCCCCTT...TTCCTGAAGCCACAGGAAAGCACCCTGGAGTCCTTTGTATACCACTATGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR CAA 72 bp TCTCCCTTTGAGGATGAGGTCCACTGTATACCACTTTaGACAAACCATGCTGGGATAGTGCACTCTCAGTCA +
Preference number: 4 (lower is better)
Translates to: SPFEDEVHCIPL*TNHAGIVHSQS
Trigger: TGACTGAGAGTGCACTATCCCAGCATGGTTTGTCAAAAGTGGTATACAGTGGACCTCATCCTCAAAGGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp GTCACAGTGAAAAAGAGCCAAGAACTGGACAGCTCCTTAGGTCTTCCTCAACGGCACAACCCCTTTCTCTaGAGTAAACATTTTTCCACA +
Preference number: 4 (lower is better)
Translates to: VTVKKSQELDSSLGLPQRHNPFL*SKHFST
Trigger: TGTGGAAAAATGTTTACTTCAGAGAAAGGGGTTGTG...CCGTTGAGGAAGACCTAAGGAGCTGTCCAGTTCTTGGCTCTTTTTCACTGTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000432176.7
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp CTGTTTTCAGATTGGCTTCCTGACCAGGAGCTAGAGAATTCCTGGAGTTGTGCCCACAACCCCTTTCTCTaGAGTAAACATTTTTCCACA +
Preference number: 4 (lower is better)
Translates to: LFSDWLPDQELENSWSCAHNPFL*SKHFST
Trigger: TGTGGAAAAATGTTTACTTCAGAGAAAGGGGTTGTG...GGCACAACTCCAGGAATTCTCTAGCTCCTGGTCAGGAAGCCAATCTGAAAACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR TCA 90 bp GATCTCTCAGCTCTGTCAGCTAACATTTCCCCAAACTTATTCTACAATGTTTCCCACATTTCTGCTGGCTaGGACTGCAAGGTAGCACCA +
Preference number: 4 (lower is better)
Translates to: DLSALSANISPNLFYNVSHISAG*DCKVAP
Trigger: TGGTGCTACCTTGCAGTCTCAGCCAGCAGAAATGTG...GGAAACATTGTAGAATAAGTTTGGGGAAATGTTAGCTGACAGAGCTGAGAGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681402.1
CDS-3UTR TCA 90 bp GTCTTTTCCACCTATGACCCCTTATTGACATGCTGGTTACTGCATTTCTTGATACACATTTCTGCTGGCTaGGACTGCAAGGTAGCACCA +
Preference number: 4 (lower is better)
Translates to: VFSTYDPLLTCWLLHFLIHISAG*DCKVAP
Trigger: TGGTGCTACCTTGCAGTCTCAGCCAGCAGAAATGTG...TATCAAGAAATGCAGTAACCAGCATGTCAATAAGGGGTCATAGGTGGAAAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679789.1
ENST00000681079.1
ENST00000681402.1
CDS-3UTR TCA 90 bp AATGATGACTTAAGTACATTTGCTTTACAGGGGAACCGCAACCATAGCCAAAAGCACATTTCTGCTGGCTaGGACTGCAAGGTAGCACCA +
Preference number: 4 (lower is better)
Translates to: NDDLSTFALQGNRNHSQKHISAG*DCKVAP
Trigger: TGGTGCTACCTTGCAGTCTCAGCCAGCAGAAATGTG...CTTTTGGCTATGGTTGCGGTTCCCCTGTAAAGCAAATGTACTTAAGTCATCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681402.1
CDS-3UTR TCA 90 bp TTCCTCCAGTTTTGCTTCCTCCTGACCGTCTGTGGTTCTTTCCTATACTTGGCTACAAATTTGACACAGTaGCTGAAGAGAAACACTGGG +
Preference number: 4 (lower is better)
Translates to: FLQFCFLLTVCGSFLYLATNLTQ*LKRNTG
Trigger: CCCAGTGTTTCTCTTCAGTCACTGTGTCAAATTTGT...AGCCAAGTATAGGAAAGAACCACAGACGGTCAGGAGGAAGCAAAACTGGAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp TCAGGGCTCCTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAAGAATTGCACCATGAATCCTaGAGAAACTGGTATCCTGCT +
Preference number: 4 (lower is better)
Translates to: SGLLSGIRMKDPGYFHKELHHES*RNWYPA
Trigger: AGCAGGATACCAGTTTCTTCAGGATTCATGGTGCAA...TTCTTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAGGAGCCCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR TCA 90 bp GAATTCCTGGAGTTGTGCCTCTGCCCCATTCTCTATAAAACAGTTCCCATACATGGGACCATGAGGCAATaGAGCCTTTATTGCATTAGC +
Preference number: 4 (lower is better)
Translates to: EFLELCLCPILYKTVPIHGTMRQ*SLYCIS
Trigger: GCTAATGCAATAAAGGCTTCATTGCCTCATGGTCCC...ATGTATGGGAACTGTTTTATAGAGAATGGGGCAGAGGCACAACTCCAGGAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR TCA 90 bp ATAAAGTCAGGGGAGCCTTCAGAATTTAAGACATCAGGGCTCCTGTCAGGAATAGGGACCATGAGGCAATaGAGCCTTTATTGCATTAGC +
Preference number: 4 (lower is better)
Translates to: IKSGEPSEFKTSGLLSGIGTMRQ*SLYCIS
Trigger: GCTAATGCAATAAAGGCTTCATTGCCTCATGGTCCC...TATTCCTGACAGGAGCCCTGATGTCTTAAATTCTGAAGGCTCCCCTGACTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR TCA 90 bp GGGCTCCTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAAGAAGCAGAGAGGAAGTTGGTGTaGTTTCAACTTGAATACACC +
Preference number: 4 (lower is better)
Translates to: GLLSGIRMKDPGYFHKEAERKLV*FQLEYT
Trigger: GGTGTATTCAAGTTGAAATCACACCAACTTCCTCTC...TGCTTCTTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAGGAGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR TCA 90 bp GGGCTCCTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAAGAAGCAGGTTACTGCATTTCTTaGTATTCGAGAGGAAGTTGG +
Preference number: 4 (lower is better)
Translates to: GLLSGIRMKDPGYFHKEAGYCIS*YSRGSW
Trigger: CCAACTTCCTCTCGAATATCAAGAAATGCAGTAACC...TGCTTCTTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAGGAGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR TCA 90 bp AAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTAGGCCCTATGACCCCTTATTaGCATGCTGGTTACTGCATT +
Preference number: 4 (lower is better)
Translates to: KDLLNTVAAVLAKPWLLGPMTPY*HAGYCI
Trigger: AATGCAGTAACCAGCATGTCAATAAGGGGTCATAGG...GCCTAGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp TTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTAGGCTTAGGTCCTATGACCCCTTATTaGCATGCTGGTTACTGCATT +
Preference number: 4 (lower is better)
Translates to: LLNTVAAVLAKPWLLGLGPMTPY*HAGYCI
Trigger: AATGCAGTAACCAGCATGTCAATAAGGGGTCATAGG...ACCTAAGCCTAGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp CCTTCAGAATTTAAGACATCAGGGCTCCTGTCAGGAATACGGATGAAAGACCCATGTCTTTTCCACCTATaGCCCCTTATTGACATGCTG +
Preference number: 4 (lower is better)
Translates to: PSEFKTSGLLSGIRMKDPCLFHL*PLIDML
Trigger: CAGCATGTCAATAAGGGGTCATAGGTGGAAAAGACA...TGGGTCTTTCATCCGTATTCCTGACAGGAGCCCTGATGTCTTAAATTCTGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR TCA 90 bp ACCACTGACTTGTTCAAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAAGTTTTGCTTCCTCCTaGCCGTCTGTGGTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: TTDLFKGFTKYSRCGLSQSFASS*PSVVLS
Trigger: GGAAAGAACCACAGACGGTCAGGAGGAAGCAAAACT...TTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTTGAACAAGTCAGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp GGGCTCCTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAAGAAGCATGTTTTCGAGCAAAGTaGTCTTTGCAAGATTCCCCT +
Preference number: 4 (lower is better)
Translates to: GLLSGIRMKDPGYFHKEACFRAK*SLQDSP
Trigger: AGGGGAATCTTGCAAAGATCACTTTGCTCGAAAACA...TGCTTCTTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAGGAGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR TCA 90 bp ATTTCCATAGTGGTATACAAAGGACTCCAGGGTGCTTTCCTGTGGCTTCAGGAATCACTTTGGGCTCTCTaGGTTTGTTTTCGAGCAAAG +
Preference number: 4 (lower is better)
Translates to: ISIVVYKGLQGAFLWLQESLWAL*VCFRAK
Trigger: CTTTGCTCGAAAACAAACTCAGAGAGCCCAAAGTGA...TTCCTGAAGCCACAGGAAAGCACCCTGGAGTCCTTTGTATACCACTATGGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp GGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTAGGCTTTCACTTTGGGCTCTCTaGGTTTGTTTTCGAGCAAAG +
Preference number: 4 (lower is better)
Translates to: GFTKYSRCGLSQTMATRLSLWAL*VCFRAK
Trigger: CTTTGCTCGAAAACAAACTCAGAGAGCCCAAAGTGA...AAGCCTAGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp ACATCAGGGCTCCTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAATCACTTTGGGCTCTCTaGGTTTGTTTTCGAGCAAAG +
Preference number: 4 (lower is better)
Translates to: TSGLLSGIRMKDPGYFHKSLWAL*VCFRAK
Trigger: CTTTGCTCGAAAACAAACTCAGAGAGCCCAAAGTGA...TTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAGGAGCCCTGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR TCA 90 bp ACCACTGACTTGTTCAAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACAACCAACAGCAGATaGCGGGTTATGTGGGACTGT +
Preference number: 4 (lower is better)
Translates to: TTDLFKGFTKYSRCGLSQTTNSR*RVMWDC
Trigger: ACAGTCCCACATAACCCGTCATCTGCTGTTGGTTGT...TTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTTGAACAAGTCAGTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp CTCTCTCTCACTCTGAATGATGACTTAAGTACATTTGCTTTACAGGGGAACCGCTGTCAGGAATACGGATaGAAGACCCAGGGTACTTTC +
Preference number: 4 (lower is better)
Translates to: LSLTLNDDLSTFALQGNRCQEYG*KTQGTF
Trigger: GAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACA...GCGGTTCCCCTGTAAAGCAAATGTACTTAAGTCATCATTCAGAGTGAGAGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp AACAGTTCCCATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCCCTTACAACCTCACATaGGACATAACCAACTTGATT +
Preference number: 4 (lower is better)
Translates to: NSSHTCRLPLTLKAKHTAPYNLT*DITNLI
Trigger: AATCAAGTTGGTTATGTCTCATGTGAGGTTGTAAGG...GGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATGGGAACTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR TCA 90 bp CTGTTTTCAGATTGGCTTCCTGACCAGGAGCTAGAGAATTCCTGGAGTTGTGCCCCTTACAACCTCACATaGGACATAACCAACTTGATT +
Preference number: 4 (lower is better)
Translates to: LFSDWLPDQELENSWSCAPYNLT*DITNLI
Trigger: AATCAAGTTGGTTATGTCTCATGTGAGGTTGTAAGG...GGCACAACTCCAGGAATTCTCTAGCTCCTGGTCAGGAAGCCAATCTGAAAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR TCA 90 bp AACAGTTCCCATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCTTGCAAGATTTACACTaGTTTCCAGGAAGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: NSSHTCRLPLTLKAKHTALQDLH*FPGSLP
Trigger: TGGAAGACTTCCTGGAAATCAGTGTAAATCTTGCAA...GGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATGGGAACTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR TCA 90 bp CTTGGAGACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAACCAATATACAGTGGTATCTTaGGAGCTATGTTGCAAGATT +
Preference number: 4 (lower is better)
Translates to: LGDYKRKTYWHLSQPHNQYTVVS*ELCCKI
Trigger: AATCTTGCAACATAGCTCTCAAGATACCACTGTATA...TTGGTTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTCTCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp CTTCTTGGAGACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAACTATACAGTGGTATCTTaGGAGCTATGTTGCAAGATT +
Preference number: 4 (lower is better)
Translates to: LLGDYKRKTYWHLSQPHNYTVVS*ELCCKI
Trigger: AATCTTGCAACATAGCTCTCAAGATACCACTGTATA...GTTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTCTCCAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp TCCCATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAAATCTTCATCTTTGGATaGATACGAGTGGACCTGTCA +
Preference number: 4 (lower is better)
Translates to: SHTCRLPLTLKAKHTAIKIFIFG*IRVDLS
Trigger: TGACAGGTCCACTCGTATTCATCCAAAGATGAAGAT...TTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR TCA 90 bp TTAACAGTAACTCTCTTCTTGGGCCTTTTACCCAGATTTGGCAAATTCCATAATTCCTCAACGGTCAACTaGCTCAGCCTCAGCCGTGCT +
Preference number: 4 (lower is better)
Translates to: LTVTLFLGLLPRFGKFHNSSTVN*LSLSRA
Trigger: AGCACGGCTGAGGCTGAGTCAGTTGACCGTTGAGGA...ATTATGGAATTTGCCAAATCTGGGTAAAAGGCCCAAGAAGAGAGTTACTGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR TCA 90 bp CAAGAATTCAGCAAATACTCAAGAGGAAAACAAGGAAAGTGCCAGGCTCACTTCGCTGTGCAGTCACAGTaGAAAAGAGCCAAGAACTGG +
Preference number: 4 (lower is better)
Translates to: QEFSKYSRGKQGKCQAHFAVQSQ*KRAKNW
Trigger: CCAGTTCTTGGCTCTTTTTCACTGTGACTGCACAGC...GAAGTGAGCCTGGCACTTTCCTTGTTTTCCTCTTGAGTATTTGCTGAATTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR TCA 90 bp CTGACTTGTTCAAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCAAGCATGCTCTCTTGGTaGCTACAGCAAGGGACTATG +
Preference number: 4 (lower is better)
Translates to: LTCSKDLLNTVAAVLAKPSMLSW*LQQGTM
Trigger: CATAGTCCCTTGCTGTAGTCACCAAGAGAGCATGCT...TGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTTGAACAAGTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440481.6
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp TCTTCTTGGAGACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAACTAGAGAGGTCTAAATaGGGTTCCATTACAGTGATA +
Preference number: 4 (lower is better)
Translates to: SSWRLQAENLLASVPAPQLERSK*GSITVI
Trigger: TATCACTGTAATGGAACCTCATTTAGACCTCTCTAG...TTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTCTCCAAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440481.6
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp AACAGTTCCCATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCTCTGGGACAGTCCCTTaGAAAGTCTATTTTTGTTTC +
Preference number: 4 (lower is better)
Translates to: NSSHTCRLPLTLKAKHTASGTVP*KVYFCF
Trigger: GAAACAAAAATAGACTTTTCAAGGGACTGTCCCAGA...GGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATGGGAACTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp TCTTCTTGGAGACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAATCTGGGACAGTCCCTTaGAAAGTCTATTTTTGTTTC +
Preference number: 4 (lower is better)
Translates to: SSWRLQAENLLASVPAPQSGTVP*KVYFCF
Trigger: GAAACAAAAATAGACTTTTCAAGGGACTGTCCCAGA...TTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTCTCCAAGAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000440481.6
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp ACAAGATACCAGATAATGCCAATCCTACTTACTGGTCCTCAGACCACACAGCTATACTCCTCAGCCCTATaGCATGTAAAGCACAAAGCC +
Preference number: 4 (lower is better)
Translates to: TRYQIMPILLTGPQTTQLYSSAL*HVKHKA
Trigger: GGCTTTGTGCTTTACATGTCATAGGGCTGAGGAGTA...TAGCTGTGTGGTCTGAGGACCAGTAAGTAGGATTGGCATTATCTGGTATCTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR TCA 90 bp ACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAAATAGGAAGTCCTCTACCCTATTaGGAGCTTCAGTTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: TCRLPLTLKAKHTAIKIGSPLPY*ELQFPL
Trigger: AAGAGGAAACTGAAGCTCTCAATAGGGTAGAGGACT...TCCTATTTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR TCA 90 bp TCCCATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAAGTCATCTTGACCATCTaGTTATTTAGCACCTCCTTC +
Preference number: 4 (lower is better)
Translates to: SHTCRLPLTLKAKHTAIKVILTI*LFSTSF
Trigger: GAAGGAGGTGCTAAATAATCAGATGGTCAAGATGAC...TTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR TCA 90 bp GGAATGAGGTCATTGTCTTATCACTTACCCCCAAAAGCTCTCAATGGCTCAACTGGAATTGGGATGGTTTaGATCCGTGCTGAATTCCCT +
Preference number: 4 (lower is better)
Translates to: GMRSLSYHLPPKALNGSTGIGMV*IRAEFP
Trigger: AGGGAATTCAGCACGGATTCAAACCATCCCAATTCC...AGTTGAGCCATTGAGAGCTTTTGGGGGTAAGTGATAAGACAATGACCTCATTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR GCA 90 bp ACTTTCATAAAGAAGCAAAGTTGTATTTCCAGGTTCACTAGGTTATGGGAGAAAGACAGCGACGGAGGCTaGTCTGCTTCCTCCCGAGTA +
Preference number: 4 (lower is better)
Translates to: TFIKKQSCISRFTRLWEKDSDGG*SASSRV
Trigger: TACTCGGGAGGAAGCAGAGCAGCCTCCGTCGCTGTC...TTTCTCCCATAACCTAGTGAACCTGGAAATACAACTTTGCTTCTTTATGAAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR GCA 90 bp TCTGAGCTCTGCATAAGCAGGAACAAGAGGAAAACACTAGCATGCTCTCTTGGTACTGCTCCTCTCCACTaGGATAGAATTCAAAGAGCT +
Preference number: 4 (lower is better)
Translates to: SELCISRNKRKTLACSLGTAPLH*DRIQRA
Trigger: AGCTCTTTGAATTCTATCGCAGTGGAGAGGAGCAGT...ACCAAGAGAGCATGCTAGTGTTTTCCTCTTGTTCCTGCTTATGCAGAGCTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
CDS-3UTR GCA 90 bp GATGACGGGTTATGTGGGACTGTGACACCACTGACTTGTTCAAAGGATTTACTATGCTATGCACATTTCTaGTGGCTGAGACTGCAAGGT +
Preference number: 4 (lower is better)
Translates to: DDGLCGTVTPLTCSKDLLCYAHF*WLRLQG
Trigger: ACCTTGCAGTCTCAGCCAGCAGAAATGTGCATAGCA...TAGTAAATCCTTTGAACAAGTCAGTGGTGTCACAGTCCCACATAACCCGTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681402.1
CDS-3UTR GCA 90 bp ACAAGATACCAGATAATGCCAATCCTACTTACTGGTCCTCAGACCACACAGCTAATGCATCCACTGCTATaGACATTTCTGCTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: TRYQIMPILLTGPQTTQLMHPLL*TFLLAE
Trigger: CTCAGCCAGCAGAAATGTGCATAGCAGTGGATGCAT...TAGCTGTGTGGTCTGAGGACCAGTAAGTAGGATTGGCATTATCTGGTATCTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681402.1
CDS-3UTR GCA 90 bp CTTTTCCTCCAGTTTTGCTTCCTCCTGACCGTCTGTGGTTCTTTCCTATACTTGCTTCAATGCATCCACTaGTATGCACATTTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LFLQFCFLLTVCGSFLYLLQCIH*YAHFCW
Trigger: CCAGCAGAAATGTGCATAGCAGTGGATGCATTGAAG...CAAGTATAGGAAAGAACCACAGACGGTCAGGAGGAAGCAAAACTGGAGGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681402.1
CDS-3UTR GCA 90 bp AGCAGGAACAAGAGGAAAACACTAGCATGCTCTCTTGGTGACTACAGCAAGGGAGAAGAAGAGCTTCAATaGATCCACTGCTATGCACAT +
Preference number: 4 (lower is better)
Translates to: SRNKRKTLACSLGDYSKGEEELQ*IHCYAH
Trigger: ATGTGCATAGCAGTGGATGCATTGAAGCTCTTCTTC...TCCCTTGCTGTAGTCACCAAGAGAGCATGCTAGTGTTTTCCTCTTGTTCCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681402.1
CDS-3UTR GCA 90 bp TCCCATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAAGAAGAAGAGCTTCAATaGATCCACTGCTATGCACAT +
Preference number: 4 (lower is better)
Translates to: SHTCRLPLTLKAKHTAIKEEELQ*IHCYAH
Trigger: ATGTGCATAGCAGTGGATGCATTGAAGCTCTTCTTC...TTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR GCA 90 bp AGCAGGAACAAGAGGAAAACACTAGCATGCTCTCTTGGTGACTACAGCAAGGGAACTTTTGACAAACCATaGTGGGATAGTGCACTCTCA +
Preference number: 4 (lower is better)
Translates to: SRNKRKTLACSLGDYSKGTFDKP*WDSALS
Trigger: TGAGAGTGCACTATCCCAGCATGGTTTGTCAAAAGT...TCCCTTGCTGTAGTCACCAAGAGAGCATGCTAGTGTTTTCCTCTTGTTCCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp GGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTAGGCTTTTCAAACCGATTCTGTaGTGTCAGCATCTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: GFTKYSRCGLSQTMATRLFKPIL*CQHLPL
Trigger: CAAAGGGAGATGCTGACAGCACAGAATCGGTTTGAA...AAGCCTAGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp ATAAAGTCAGGGGAGCCTTCAGAATTTAAGACATCAGGGCTCCTGTCAGGAATACTTTTCCTCCAGTTTTaGTTCCTCCTGACCGTCTGT +
Preference number: 4 (lower is better)
Translates to: IKSGEPSEFKTSGLLSGILFLQF*FLLTVC
Trigger: ACAGACGGTCAGGAGGAAGCAAAACTGGAGGAAAAG...TATTCCTGACAGGAGCCCTGATGTCTTAAATTCTGAAGGCTCCCCTGACTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR GCA 90 bp ACAAGATACCAGATAATGCCAATCCTACTTACTGGTCCTCAGACCACACAGCTACTTTTCCTCCAGTTTTaGTTCCTCCTGACCGTCTGT +
Preference number: 4 (lower is better)
Translates to: TRYQIMPILLTGPQTTQLLFLQF*FLLTVC
Trigger: ACAGACGGTCAGGAGGAAGCAAAACTGGAGGAAAAG...TAGCTGTGTGGTCTGAGGACCAGTAAGTAGGATTGGCATTATCTGGTATCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp CATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAAATACTTTTCCTCCAGTTTTaGTTCCTCCTGACCGTCTGT +
Preference number: 4 (lower is better)
Translates to: HTCRLPLTLKAKHTAIKILFLQF*FLLTVC
Trigger: ACAGACGGTCAGGAGGAAGCAAAACTGGAGGAAAAG...TATTTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR GCA 90 bp GGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTAGGCTTACTAAATACAGTCGCTaGGGTCTTAGCCAAACCATG +
Preference number: 4 (lower is better)
Translates to: GFTKYSRCGLSQTMATRLTKYSR*GLSQTM
Trigger: CATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGT...AAGCCTAGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp TTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTAGGCTTAGGCTGGAGTTGTGCCTCTaGCCCATTCTCTATAAAACA +
Preference number: 4 (lower is better)
Translates to: FTKYSRCGLSQTMATRLRLELCL*PILYKT
Trigger: TGTTTTATAGAGAATGGGGCAGAGGCACAACTCCAG...CCTAAGCCTAGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp TCTTCTTGGAGACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAAAATATCAAGTTTCACTaGCCGATTGCCTTACAGTTC +
Preference number: 4 (lower is better)
Translates to: SSWRLQAENLLASVPAPQNIKFH*PIALQF
Trigger: GAACTGTAAGGCAATCGGGCAGTGAAACTTGATATT...TTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTCTCCAAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000440481.6
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp GATCTCTCAGCTCTGTCAGCTAACATTTCCCCAAACTTATTCTACAATGTTTCCCAAAGGACTCCAGGGTaGTTTCCTGTGGCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: DLSALSANISPNLFYNVSQRTPG*FPVASG
Trigger: TCCTGAAGCCACAGGAAAGCACCCTGGAGTCCTTTG...GGAAACATTGTAGAATAAGTTTGGGGAAATGTTAGCTGACAGAGCTGAGAGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp ATTTCCATAGTGGTATACAAAGGACTCCAGGGTGCTTTCCTGTGGCTTCAGGAAGGAAAACAAGGAAAGTaGCAGGCTCACTTCTCTGAA +
Preference number: 4 (lower is better)
Translates to: ISIVVYKGLQGAFLWLQEGKQGK*QAHFSE
Trigger: TTCAGAGAAGTGAGCCTGGCACTTTCCTTGTTTTCC...TTCCTGAAGCCACAGGAAAGCACCCTGGAGTCCTTTGTATACCACTATGGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CCA 90 bp ATAAAGTCAGGGGAGCCTTCAGAATTTAAGACATCAGGGCTCCTGTCAGGAATACCATGGACCCAATGCTaGAAGGTTCATGGTATACAG +
Preference number: 4 (lower is better)
Translates to: IKSGEPSEFKTSGLLSGIPWTQC*KVHGIQ
Trigger: CTGTATACCATGAACCTTCCAGCATTGGGTCCATGG...TATTCCTGACAGGAGCCCTGATGTCTTAAATTCTGAAGGCTCCCCTGACTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CCA 90 bp TTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTAGGCTTAGGTTTTGACAAACCATGCTaGGATAGTGCACTCTCAGTC +
Preference number: 4 (lower is better)
Translates to: LLNTVAAVLAKPWLLGLGFDKPC*DSALSV
Trigger: GACTGAGAGTGCACTATCCCAGCATGGTTTGTCAAA...ACCTAAGCCTAGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp CTCCAGTTTTGCTTCCTCCTGACCGTCTGTGGTTCTTTCCTATACTTGGCTTGTACTGAAGAGAAACACTaGGCATGTAAGTTAAGGCAG +
Preference number: 4 (lower is better)
Translates to: LQFCFLLTVCGSFLYLACTEEKH*ACKLRQ
Trigger: CTGCCTTAACTTACATGCCCAGTGTTTCTCTTCAGT...ACAAGCCAAGTATAGGAAAGAACCACAGACGGTCAGGAGGAAGCAAAACTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp GGGCTCCTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAAGAAGCAACTGAAGAGAAACACTaGGCATGTAAGTTAAGGCAG +
Preference number: 4 (lower is better)
Translates to: GLLSGIRMKDPGYFHKEATEEKH*ACKLRQ
Trigger: CTGCCTTAACTTACATGCCCAGTGTTTCTCTTCAGT...TGCTTCTTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAGGAGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CCA 90 bp TTGGAGACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAACCAACCCCTTATTGACATGCTaGTTACTGCATTTCTTGATA +
Preference number: 4 (lower is better)
Translates to: LETTSGKPIGICPSPTTNPLLTC*LLHFLI
Trigger: TATCAAGAAATGCAGTAACCAGCATGTCAATAAGGG...GTTGGTTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTCTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp CTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAAGAAGCAAAGTTGTTTGATAAACCCGACTaGCTGGTACTAGACGCAGCC +
Preference number: 4 (lower is better)
Translates to: LSGIRMKDPGYFHKEAKLFDKPD*LVLDAA
Trigger: GGCTGCGTCTAGTACCAGCCAGTCGGGTTTATCAAA...CAACTTTGCTTCTTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CCA 90 bp ATGTGGGACTGTGACACCACTGACTTGTTCAAAGGATTTACTAAATACAGTCGCTTTGATAAACCCGACTaGCTGGTACTAGACGCAGCC +
Preference number: 4 (lower is better)
Translates to: MWDCDTTDLFKGFTKYSRFDKPD*LVLDAA
Trigger: GGCTGCGTCTAGTACCAGCCAGTCGGGTTTATCAAA...GCGACTGTATTTAGTAAATCCTTTGAACAAGTCAGTGGTGTCACAGTCCCACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp GTCTCTTCAAAGAGAGAAGCTCAAGATTCTCACTTTGGGCTCTCTGAGTTTGTTCCTCCTGACCGTCTGTaGTTCTTTCCTATACTTGGC +
Preference number: 4 (lower is better)
Translates to: VSSKREAQDSHFGLSEFVPPDRL*FFPILG
Trigger: GCCAAGTATAGGAAAGAACCACAGACGGTCAGGAGG...AACAAACTCAGAGAGCCCAAAGTGAGAATCTTGAGCTTCTCTCTTTGAAGAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp ACAGCAGATGACGGGTTATGTGGGACTGTGACACCACTGACTTGTTCAAAGGATGGCTTAGGTAGGGATTaGCTGGTTGTTAAAGTAAGT +
Preference number: 4 (lower is better)
Translates to: TADDGLCGTVTPLTCSKDGLGRD*LVVKVS
Trigger: ACTTACTTTAACAACCAGCCAATCCCTACCTAAGCC...ATCCTTTGAACAAGTCAGTGGTGTCACAGTCCCACATAACCCGTCATCTGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp GAGAAACACTGGGCATGTAAGTTAAGGCAGCATTGTAACACAACAAAAGGAATGGAGCTAGAGAATTCCTaGAGTTGTGCCTCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: EKHWACKLRQHCNTTKGMELENS*SCASAP
Trigger: TGGGGCAGAGGCACAACTCCAGGAATTCTCTAGCTC...CATTCCTTTTGTTGTGTTACAATGCTGCCTTAACTTACATGCCCAGTGTTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp CTCTCTCTCACTCTGAATGATGACTTAAGTACATTTGCTTTACAGGGGAACCGCTGCCTGTTTTCAGATTaGCTTCCTGACCAGGAGCTA +
Preference number: 4 (lower is better)
Translates to: LSLTLNDDLSTFALQGNRCLFSD*LPDQEL
Trigger: TAGCTCCTGGTCAGGAAGCCAATCTGAAAACAGGCA...GCGGTTCCCCTGTAAAGCAAATGTACTTAAGTCATCATTCAGAGTGAGAGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp ACTGTGACACCACTGACTTGTTCAAAGGATTTACTAAATACAGTCGCTGCGGTCTGCCTGTTTTCAGATTaGCTTCCTGACCAGGAGCTA +
Preference number: 4 (lower is better)
Translates to: TVTPLTCSKDLLNTVAAVCLFSD*LPDQEL
Trigger: TAGCTCCTGGTCAGGAAGCCAATCTGAAAACAGGCA...GACCGCAGCGACTGTATTTAGTAAATCCTTTGAACAAGTCAGTGGTGTCACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp ACATCAGGGCTCCTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAATTGGATGAATACGAGTaGACCTGTCATACTCCTCAG +
Preference number: 4 (lower is better)
Translates to: TSGLLSGIRMKDPGYFHKLDEYE*TCHTPQ
Trigger: CTGAGGAGTATGACAGGTCCACTCGTATTCATCCAA...TTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAGGAGCCCTGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CCA 90 bp TCGGTGCAAAGCAGACTAGAAATACTGCTCATATTTATTCTCGCTGGAAAAAGTTCCGCCACTGGTGCATaGCCCATAGAGCTCATCTTC +
Preference number: 4 (lower is better)
Translates to: SVQSRLEILLIFILAGKSSATGA*PIELIF
Trigger: GAAGATGAGCTCTATGGGCCATGCACCAGTGGCGGA...ACTTTTTCCAGCGAGAATAAATATGAGCAGTATTTCTAGTCTGCTTTGCACCGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CCA 90 bp GTCTCTTCAAAGAGAGAAGCTCAAGATTCTCACTTTGGGCTCTCTGAGTTTGTTGCCAATCCTACTTACTaGTCCTCAGACCACACAGCT +
Preference number: 4 (lower is better)
Translates to: VSSKREAQDSHFGLSEFVANPTY*SSDHTA
Trigger: AGCTGTGTGGTCTGAGGACCAGTAAGTAGGATTGGC...AACAAACTCAGAGAGCCCAAAGTGAGAATCTTGAGCTTCTCTCTTTGAAGAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440481.6
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp TCTGAGCTCTGCATAAGCAGGAACAAGAGGAAAACACTAGCATGCTCTCTTGGTAATACTCCAGGCCGTTaGGTTTTCAAATGTGAGAGG +
Preference number: 4 (lower is better)
Translates to: SELCISRNKRKTLACSLGNTPGR*VFKCER
Trigger: CCTCTCACATTTGAAAACCCAACGGCCTGGAGTATT...ACCAAGAGAGCATGCTAGTGTTTTCCTCTTGTTCCTGCTTATGCAGAGCTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp ACCACTGACTTGTTCAAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAATTGCCCTGGGTAGTCTaGGACAGTCCCTTGAAAAGT +
Preference number: 4 (lower is better)
Translates to: TTDLFKGFTKYSRCGLSQLPWVV*DSPLKS
Trigger: ACTTTTCAAGGGACTGTCCCAGACTACCCAGGGCAA...TTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTTGAACAAGTCAGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440481.6
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp CTCTCTCTCACTCTGAATGATGACTTAAGTACATTTGCTTTACAGGGGAACCGCCCCTCTTTTATGACTTaGCAGGCACTGGCATTCAGT +
Preference number: 4 (lower is better)
Translates to: LSLTLNDDLSTFALQGNRPSFMT*QALAFS
Trigger: ACTGAATGCCAGTGCCTGCCAAGTCATAAAAGAGGG...GCGGTTCCCCTGTAAAGCAAATGTACTTAAGTCATCATTCAGAGTGAGAGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CCA 90 bp AACAGTTCCCATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCTTTCAGGAATTGGGATaGTTTGAATCCGTGCTGAAT +
Preference number: 4 (lower is better)
Translates to: NSSHTCRLPLTLKAKHTAFQELG*FESVLN
Trigger: ATTCAGCACGGATTCAAACCATCCCAATTCCTGAAA...GGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATGGGAACTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CCA 90 bp GGGCTCCTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAAGAAGCATCTGATTTCAGGAATTaGGATGGTTTGAATCCGTGC +
Preference number: 4 (lower is better)
Translates to: GLLSGIRMKDPGYFHKEASDFRN*DGLNPC
Trigger: GCACGGATTCAAACCATCCCAATTCCTGAAATCAGA...TGCTTCTTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAGGAGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CCA 90 bp ATTTCCATAGTGGTATACAAAGGACTCCAGGGTGCTTTCCTGTGGCTTCAGGAATCTCCCAAGTGCGATTaGTTTAAAGGCCCTGTTCTT +
Preference number: 4 (lower is better)
Translates to: ISIVVYKGLQGAFLWLQESPKCD*FKGPVL
Trigger: AAGAACAGGGCCTTTAAACCAATCGCACTTGGGAGA...TTCCTGAAGCCACAGGAAAGCACCCTGGAGTCCTTTGTATACCACTATGGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR TCA 90 bp GATGACGGGTTATGTGGGACTGTGACACCACTGACTTGTTCAAAGGATTTACTATTGCACCATGAATCCTaGAGAAACTGGTATCCTGCT +
Preference number: 4 (lower is better)
Translates to: DDGLCGTVTPLTCSKDLLLHHES*RNWYPA
Trigger: AGCAGGATACCAGTTTCTTCAGGATTCATGGTGCAA...TAGTAAATCCTTTGAACAAGTCAGTGGTGTCACAGTCCCACATAACCCGTCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp GAATTCCTGGAGTTGTGCCTCTGCCCCATTCTCTATAAAACAGTTCCCATACATTTGCACCATGAATCCTaGAGAAACTGGTATCCTGCT +
Preference number: 4 (lower is better)
Translates to: EFLELCLCPILYKTVPIHLHHES*RNWYPA
Trigger: AGCAGGATACCAGTTTCTTCAGGATTCATGGTGCAA...ATGTATGGGAACTGTTTTATAGAGAATGGGGCAGAGGCACAACTCCAGGAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR TCA 90 bp AACCGCTGTGCAGTCACAGTGAAAAAGAGCCAAGAACTGGACAGCTCCTTAGGTTTAACATTTGCACCATaGATCCTGAAGAAACTGGTA +
Preference number: 4 (lower is better)
Translates to: NRCAVTVKKSQELDSSLGLTFAP*ILKKLV
Trigger: TACCAGTTTCTTCAGGATTCATGGTGCAAATGTTAA...ACCTAAGGAGCTGTCCAGTTCTTGGCTCTTTTTCACTGTGACTGCACAGCGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp GAATTCCTGGAGTTGTGCCTCTGCCCCATTCTCTATAAAACAGTTCCCATACATTCATCCAGTGCTTTTTaGGCTAGATCCCATTCTCCA +
Preference number: 4 (lower is better)
Translates to: EFLELCLCPILYKTVPIHSSSAF*ARSHSP
Trigger: TGGAGAATGGGATCTAGCTCAAAAAGCACTGGATGA...ATGTATGGGAACTGTTTTATAGAGAATGGGGCAGAGGCACAACTCCAGGAATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp CCTGGAATAAAATCCCTCGTCAACTTCAGATATCTCCATCAGTTCTTCTTGACCGGGACCATGAGGCAATaGAGCCTTTATTGCATTAGC +
Preference number: 4 (lower is better)
Translates to: PGIKSLVNFRYLHQFFLTGTMRQ*SLYCIS
Trigger: GCTAATGCAATAAAGGCTTCATTGCCTCATGGTCCC...GGTCAAGAAGAACTGATGGAGATATCTGAAGTTGACGAGGGATTTTATTCCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp TTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTAGGCTTAGGGGTGTGATTTCAACTTaGATACACCTTGTACCTTCC +
Preference number: 4 (lower is better)
Translates to: FTKYSRCGLSQTMATRLRGVIST*IHLVPS
Trigger: GGAAGGTACAAGGTGTATTCAAGTTGAAATCACACC...CCTAAGCCTAGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp CCTTCAGAATTTAAGACATCAGGGCTCCTGTCAGGAATACGGATGAAAGACCCAGGTGTGATTTCAACTTaGATACACCTTGTACCTTCC +
Preference number: 4 (lower is better)
Translates to: PSEFKTSGLLSGIRMKDPGVIST*IHLVPS
Trigger: GGAAGGTACAAGGTGTATTCAAGTTGAAATCACACC...TGGGTCTTTCATCCGTATTCCTGACAGGAGCCCTGATGTCTTAAATTCTGAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR TCA 90 bp ACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAAATAGGAGGTGTGATTTCAACTTaGATACACCTTGTACCTTCC +
Preference number: 4 (lower is better)
Translates to: TCRLPLTLKAKHTAIKIGGVIST*IHLVPS
Trigger: GGAAGGTACAAGGTGTATTCAAGTTGAAATCACACC...TCCTATTTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR TCA 90 bp AAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTAGGCGAGAGGAAGTTGGTGTaGTTTCAACTTGAATACACC +
Preference number: 4 (lower is better)
Translates to: KDLLNTVAAVLAKPWLLGERKLV*FQLEYT
Trigger: GGTGTATTCAAGTTGAAATCACACCAACTTCCTCTC...GCCTAGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp TTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTAGGCTTAGGTGGTTACTGCATTTCTTaGTATTCGAGAGGAAGTTGG +
Preference number: 4 (lower is better)
Translates to: LLNTVAAVLAKPWLLGLGGYCIS*YSRGSW
Trigger: CCAACTTCCTCTCGAATATCAAGAAATGCAGTAACC...ACCTAAGCCTAGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp TCTGAGCTCTGCATAAGCAGGAACAAGAGGAAAACACTAGCATGCTCTCTTGGTGGTTACTGCATTTCTTaGTATTCGAGAGGAAGTTGG +
Preference number: 4 (lower is better)
Translates to: SELCISRNKRKTLACSLGGYCIS*YSRGSW
Trigger: CCAACTTCCTCTCGAATATCAAGAAATGCAGTAACC...ACCAAGAGAGCATGCTAGTGTTTTCCTCTTGTTCCTGCTTATGCAGAGCTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp GTCTTTTCCACCTATGACCCCTTATTGACATGCTGGTTACTGCATTTCTTGATAAGTTTTGCTTCCTCCTaGCCGTCTGTGGTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: VFSTYDPLLTCWLLHFLISFASS*PSVVLS
Trigger: GGAAAGAACCACAGACGGTCAGGAGGAAGCAAAACT...TATCAAGAAATGCAGTAACCAGCATGTCAATAAGGGGTCATAGGTGGAAAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp TCTTCAAAGAGAGAAGCTCAAGATTCTCACTTTGGGCTCTCTGAGTTTGTTTTCAGTTTTGCTTCCTCCTaGCCGTCTGTGGTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: SSKREAQDSHFGLSEFVFSFASS*PSVVLS
Trigger: GGAAAGAACCACAGACGGTCAGGAGGAAGCAAAACT...GAAAACAAACTCAGAGAGCCCAAAGTGAGAATCTTGAGCTTCTCTCTTTGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp TCAGGGCTCCTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAAGAATGTTTTCGAGCAAAGTaGTCTTTGCAAGATTCCCCT +
Preference number: 4 (lower is better)
Translates to: SGLLSGIRMKDPGYFHKECFRAK*SLQDSP
Trigger: AGGGGAATCTTGCAAAGATCACTTTGCTCGAAAACA...TTCTTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAGGAGCCCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR TCA 90 bp TTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTAGGCTTAGGTTGTTTTCGAGCAAAGTaGTCTTTGCAAGATTCCCCT +
Preference number: 4 (lower is better)
Translates to: LLNTVAAVLAKPWLLGLGCFRAK*SLQDSP
Trigger: AGGGGAATCTTGCAAAGATCACTTTGCTCGAAAACA...ACCTAAGCCTAGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp CTTTTCCTCCAGTTTTGCTTCCTCCTGACCGTCTGTGGTTCTTTCCTATACTTGTGTTTTCGAGCAAAGTaGTCTTTGCAAGATTCCCCT +
Preference number: 4 (lower is better)
Translates to: LFLQFCFLLTVCGSFLYLCFRAK*SLQDSP
Trigger: AGGGGAATCTTGCAAAGATCACTTTGCTCGAAAACA...CAAGTATAGGAAAGAACCACAGACGGTCAGGAGGAAGCAAAACTGGAGGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp TCTTCAAAGAGAGAAGCTCAAGATTCTCACTTTGGGCTCTCTGAGTTTGTTTTCACAACCAACAGCAGATaGCGGGTTATGTGGGACTGT +
Preference number: 4 (lower is better)
Translates to: SSKREAQDSHFGLSEFVFTTNSR*RVMWDC
Trigger: ACAGTCCCACATAACCCGTCATCTGCTGTTGGTTGT...GAAAACAAACTCAGAGAGCCCAAAGTGAGAATCTTGAGCTTCTCTCTTTGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp ATGTGGGACTGTGACACCACTGACTTGTTCAAAGGATTTACTAAATACAGTCGCTGTCAGGAATACGGATaGAAGACCCAGGGTACTTTC +
Preference number: 4 (lower is better)
Translates to: MWDCDTTDLFKGFTKYSRCQEYG*KTQGTF
Trigger: GAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACA...GCGACTGTATTTAGTAAATCCTTTGAACAAGTCAGTGGTGTCACAGTCCCACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp TCCCATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAACCTTACAACCTCACATaGGACATAACCAACTTGATT +
Preference number: 4 (lower is better)
Translates to: SHTCRLPLTLKAKHTAIKPYNLT*DITNLI
Trigger: AATCAAGTTGGTTATGTCTCATGTGAGGTTGTAAGG...TTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR TCA 90 bp TCCCATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAATTGCAAGATTTACACTaGTTTCCAGGAAGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: SHTCRLPLTLKAKHTAIKLQDLH*FPGSLP
Trigger: TGGAAGACTTCCTGGAAATCAGTGTAAATCTTGCAA...TTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR TCA 90 bp CTCCAGTTTTGCTTCCTCCTGACCGTCTGTGGTTCTTTCCTATACTTGGCTTGTTTGCAAGATTTACACTaGTTTCCAGGAAGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: LQFCFLLTVCGSFLYLACLQDLH*FPGSLP
Trigger: TGGAAGACTTCCTGGAAATCAGTGTAAATCTTGCAA...ACAAGCCAAGTATAGGAAAGAACCACAGACGGTCAGGAGGAAGCAAAACTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp GATCTCTCAGCTCTGTCAGCTAACATTTCCCCAAACTTATTCTACAATGTTTCCTACAGCAAGGGACTATaGAGAAGGAAACCGCTGTGC +
Preference number: 4 (lower is better)
Translates to: DLSALSANISPNLFYNVSYSKGL*RRKPLC
Trigger: GCACAGCGGTTTCCTTCTTCATAGTCCCTTGCTGTA...GGAAACATTGTAGAATAAGTTTGGGGAAATGTTAGCTGACAGAGCTGAGAGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp AATGATGACTTAAGTACATTTGCTTTACAGGGGAACCGCAACCATAGCCAAAAGTACAGCAAGGGACTATaGAGAAGGAAACCGCTGTGC +
Preference number: 4 (lower is better)
Translates to: NDDLSTFALQGNRNHSQKYSKGL*RRKPLC
Trigger: GCACAGCGGTTTCCTTCTTCATAGTCCCTTGCTGTA...CTTTTGGCTATGGTTGCGGTTCCCCTGTAAAGCAAATGTACTTAAGTCATCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp GCAACCAGCAATGGCTCTGGATATAATTCTAGCTGGGCTCTGTATATAATATCAAGCATGCTCTCTTGGTaGCTACAGCAAGGGACTATG +
Preference number: 4 (lower is better)
Translates to: ATSNGSGYNSSWALYIISSMLSW*LQQGTM
Trigger: CATAGTCCCTTGCTGTAGTCACCAAGAGAGCATGCT...TGATATTATATACAGAGCCCAGCTAGAATTATATCCAGAGCCATTGCTGGTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp CTGTTTTCAGATTGGCTTCCTGACCAGGAGCTAGAGAATTCCTGGAGTTGTGCCTACAGTGATAGAACATaGAAATCTGATCTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: LFSDWLPDQELENSWSCAYSDRT*KSDLSA
Trigger: AGCTGAGAGATCAGATTTTCATGTTCTATCACTGTA...GGCACAACTCCAGGAATTCTCTAGCTCCTGGTCAGGAAGCCAATCTGAAAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp TCTTCTTGGAGACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAATACAGTGATAGAACATaGAAATCTGATCTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: SSWRLQAENLLASVPAPQYSDRT*KSDLSA
Trigger: AGCTGAGAGATCAGATTTTCATGTTCTATCACTGTA...TTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTCTCCAAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440481.6
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp AGCAGGAACAAGAGGAAAACACTAGCATGCTCTCTTGGTGACTACAGCAAGGGACTAGAGAGGTCTAAATaGGGTTCCATTACAGTGATA +
Preference number: 4 (lower is better)
Translates to: SRNKRKTLACSLGDYSKGLERSK*GSITVI
Trigger: TATCACTGTAATGGAACCTCATTTAGACCTCTCTAG...TCCCTTGCTGTAGTCACCAAGAGAGCATGCTAGTGTTTTCCTCTTGTTCCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp AACCGCTGTGCAGTCACAGTGAAAAAGAGCCAAGAACTGGACAGCTCCTTAGGTCCCAATTTTCAAATTTaGAAGTTCAGTGGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: NRCAVTVKKSQELDSSLGPNFQI*KFSGEK
Trigger: TTTCTCCCCACTGAACTTTCAAATTTGAAAATTGGG...ACCTAAGGAGCTGTCCAGTTCTTGGCTCTTTTTCACTGTGACTGCACAGCGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp TATCTGGTCACCCTCAGATGTTGTATCTTAGGATGGTCACTGCTGCTGGCCAGTGTAAGACAGATGGGGTaGGTGAATTTTAAATACATC +
Preference number: 4 (lower is better)
Translates to: YLVTLRCCILGWSLLLASVRQMG*VNFKYI
Trigger: GATGTATTTAAAATTCACTCACCCCATCTGTCTTAC...ACTGGCCAGCAGCAGTGACCATCCTAAGATACAACATCTGAGGGTGACCAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR TCA 90 bp ACAAGATACCAGATAATGCCAATCCTACTTACTGGTCCTCAGACCACACAGCTAAGTCCAGAGGAAACCTaGCACAAGATTCCAAGAATC +
Preference number: 4 (lower is better)
Translates to: TRYQIMPILLTGPQTTQLSPEET*HKIPRI
Trigger: GATTCTTGGAATCTTGTGTCAGGTTTCCTCTGGACT...TAGCTGTGTGGTCTGAGGACCAGTAAGTAGGATTGGCATTATCTGGTATCTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR GCA 90 bp CTCTCTCTCACTCTGAATGATGACTTAAGTACATTTGCTTTACAGGGGAACCGCACTGCTCCTCTCCACTaGGATAGAATTCAAAGAGCT +
Preference number: 4 (lower is better)
Translates to: LSLTLNDDLSTFALQGNRTAPLH*DRIQRA
Trigger: AGCTCTTTGAATTCTATCGCAGTGGAGAGGAGCAGT...GCGGTTCCCCTGTAAAGCAAATGTACTTAAGTCATCATTCAGAGTGAGAGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
CDS-3UTR GCA 90 bp CTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAAGAAGCAAAGTTGTGCTATGCACATTTCTaGTGGCTGAGACTGCAAGGT +
Preference number: 4 (lower is better)
Translates to: LSGIRMKDPGYFHKEAKLCYAHF*WLRLQG
Trigger: ACCTTGCAGTCTCAGCCAGCAGAAATGTGCATAGCA...CAACTTTGCTTCTTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR GCA 90 bp GGAATGAGGTCATTGTCTTATCACTTACCCCCAAAAGCTCTCAATGGCTCAACTCTTCAATGCATCCACTaGTATGCACATTTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GMRSLSYHLPPKALNGSTLQCIH*YAHFCW
Trigger: CCAGCAGAAATGTGCATAGCAGTGGATGCATTGAAG...AGTTGAGCCATTGAGAGCTTTTGGGGGTAAGTGATAAGACAATGACCTCATTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR GCA 90 bp CATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAAATACTTCAATGCATCCACTaGTATGCACATTTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: HTCRLPLTLKAKHTAIKILQCIH*YAHFCW
Trigger: CCAGCAGAAATGTGCATAGCAGTGGATGCATTGAAG...TATTTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR GCA 90 bp GATGACGGGTTATGTGGGACTGTGACACCACTGACTTGTTCAAAGGATTTACTACTTCAATGCATCCACTaGTATGCACATTTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: DDGLCGTVTPLTCSKDLLLQCIH*YAHFCW
Trigger: CCAGCAGAAATGTGCATAGCAGTGGATGCATTGAAG...TAGTAAATCCTTTGAACAAGTCAGTGGTGTCACAGTCCCACATAACCCGTCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681402.1
CDS-3UTR GCA 90 bp TGTTCAAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTAGAGCCATGGACCCAATaGTGGAAGGTTCATGGTATA +
Preference number: 4 (lower is better)
Translates to: CSKDLLNTVAAVLAKPWLEPWTQ*WKVHGI
Trigger: TATACCATGAACCTTCCAGCATTGGGTCCATGGCTC...TAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTTGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp TCAGGGCTCCTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAAGAAACTTTTGACAAACCATaGTGGGATAGTGCACTCTCA +
Preference number: 4 (lower is better)
Translates to: SGLLSGIRMKDPGYFHKETFDKP*WDSALS
Trigger: TGAGAGTGCACTATCCCAGCATGGTTTGTCAAAAGT...TTCTTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAGGAGCCCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR GCA 90 bp GAATTCCTGGAGTTGTGCCTCTGCCCCATTCTCTATAAAACAGTTCCCATACATTTCAAACCGATTCTGTaGTGTCAGCATCTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: EFLELCLCPILYKTVPIHFKPIL*CQHLPL
Trigger: CAAAGGGAGATGCTGACAGCACAGAATCGGTTTGAA...ATGTATGGGAACTGTTTTATAGAGAATGGGGCAGAGGCACAACTCCAGGAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR GCA 90 bp TCAGGGGAGCCTTCAGAATTTAAGACATCAGGGCTCCTGTCAGGAATACGGATGATCCCTGTTAACATTTaGACCATGAATCCTGAAGAA +
Preference number: 4 (lower is better)
Translates to: SGEPSEFKTSGLLSGIRMIPVNI*TMNPEE
Trigger: TTCTTCAGGATTCATGGTGCAAATGTTAACAGGGAT...CATCCGTATTCCTGACAGGAGCCCTGATGTCTTAAATTCTGAAGGCTCCCCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR GCA 90 bp AACCGCTGTGCAGTCACAGTGAAAAAGAGCCAAGAACTGGACAGCTCCTTAGGTATCCCTGTTAACATTTaGACCATGAATCCTGAAGAA +
Preference number: 4 (lower is better)
Translates to: NRCAVTVKKSQELDSSLGIPVNI*TMNPEE
Trigger: TTCTTCAGGATTCATGGTGCAAATGTTAACAGGGAT...ACCTAAGGAGCTGTCCAGTTCTTGGCTCTTTTTCACTGTGACTGCACAGCGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp TCCCATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAATTTCTTACAGATTTTTaGCTCCTGATCTCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: SHTCRLPLTLKAKHTAIKFLTDF*LLISGK
Trigger: CTTGCCAGAGATCAGGAGGCAAAAATCTGTAAGAAA...TTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409923.5
ENST00000440481.6
CDS-3UTR GCA 90 bp CCAGGAGCTAGAGAATTCCTGGAGTTGTGCCTCTGCCCCATTCTCTATAAAACAAGTGCAGTTATAAAGTaGTCTGCTAAAACTGCACTC +
Preference number: 4 (lower is better)
Translates to: PGAREFLELCLCPILYKTSAVIK*SAKTAL
Trigger: GAGTGCAGTTTTAGCAGAGCACTTTATAACTGCACT...TGTTTTATAGAGAATGGGGCAGAGGCACAACTCCAGGAATTCTCTAGCTCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409923.5
ENST00000440481.6
CDS-3UTR GCA 90 bp ACTGTGACACCACTGACTTGTTCAAAGGATTTACTAAATACAGTCGCTGCGGTCACTAAATACAGTCGCTaGGGTCTTAGCCAAACCATG +
Preference number: 4 (lower is better)
Translates to: TVTPLTCSKDLLNTVAAVTKYSR*GLSQTM
Trigger: CATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGT...GACCGCAGCGACTGTATTTAGTAAATCCTTTGAACAAGTCAGTGGTGTCACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp GAATTCCTGGAGTTGTGCCTCTGCCCCATTCTCTATAAAACAGTTCCCATACATAACAGTTCCCATACATaGAGACTCCCTTTGACTCTG +
Preference number: 4 (lower is better)
Translates to: EFLELCLCPILYKTVPIHNSSHT*RLPLTL
Trigger: CAGAGTCAAAGGGAGTCTGCATGTATGGGAACTGTT...ATGTATGGGAACTGTTTTATAGAGAATGGGGCAGAGGCACAACTCCAGGAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR GCA 90 bp ATAAAGTCAGGGGAGCCTTCAGAATTTAAGACATCAGGGCTCCTGTCAGGAATACTGGAGTTGTGCCTCTaGCCCATTCTCTATAAAACA +
Preference number: 4 (lower is better)
Translates to: IKSGEPSEFKTSGLLSGILELCL*PILYKT
Trigger: TGTTTTATAGAGAATGGGGCAGAGGCACAACTCCAG...TATTCCTGACAGGAGCCCTGATGTCTTAAATTCTGAAGGCTCCCCTGACTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR GCA 90 bp AAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTAGGCTGGAGTTGTGCCTCTaGCCCATTCTCTATAAAACA +
Preference number: 4 (lower is better)
Translates to: KGFTKYSRCGLSQTMATRLELCL*PILYKT
Trigger: TGTTTTATAGAGAATGGGGCAGAGGCACAACTCCAG...CCTAGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp ATTCTGTATTTCCATGTCTTTTCCACCTATGACCCCTTATTGACATGCTGGTTACAAAGGACTCCAGGGTaGTTTCCTGTGGCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: ILYFHVFSTYDPLLTCWLQRTPG*FPVASG
Trigger: TCCTGAAGCCACAGGAAAGCACCCTGGAGTCCTTTG...TAACCAGCATGTCAATAAGGGGTCATAGGTGGAAAAGACATGGAAATACAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp CTGTTTTCAGATTGGCTTCCTGACCAGGAGCTAGAGAATTCCTGGAGTTGTGCCTATTTGCTGAGCAGTTaGTTCACAATTGAAAAGAGC +
Preference number: 4 (lower is better)
Translates to: LFSDWLPDQELENSWSCAYLLSS*FTIEKS
Trigger: GCTCTTTTCAATTGTGAAGCAACTGCTCAGCAAATA...GGCACAACTCCAGGAATTCTCTAGCTCCTGGTCAGGAAGCCAATCTGAAAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp AGCAGGAACAAGAGGAAAACACTAGCATGCTCTCTTGGTGACTACAGCAAGGGAAAGATCTCGTTATATTaGCCAGGCTGGTCTCAAATT +
Preference number: 4 (lower is better)
Translates to: SRNKRKTLACSLGDYSKGKISLY*PGWSQI
Trigger: AATTTGAGACCAGCCTGGGCAATATAACGAGATCTT...TCCCTTGCTGTAGTCACCAAGAGAGCATGCTAGTGTTTTCCTCTTGTTCCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CCA 90 bp ACAGCAGATGACGGGTTATGTGGGACTGTGACACCACTGACTTGTTCAAAGGATATGCTGGAAGGTTCATaGTATACAGATGGTTTGGAT +
Preference number: 4 (lower is better)
Translates to: TADDGLCGTVTPLTCSKDMLEGS*YTDGLD
Trigger: ATCCAAACCATCTGTATACCATGAACCTTCCAGCAT...ATCCTTTGAACAAGTCAGTGGTGTCACAGTCCCACATAACCCGTCATCTGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp GGGCTCCTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAAGAAGCAATGCTGGAAGGTTCATaGTATACAGATGGTTTGGAT +
Preference number: 4 (lower is better)
Translates to: GLLSGIRMKDPGYFHKEAMLEGS*YTDGLD
Trigger: ATCCAAACCATCTGTATACCATGAACCTTCCAGCAT...TGCTTCTTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAGGAGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CCA 90 bp CCACTGACTTGTTCAAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGACCCAATGCTaGAAGGTTCATGGTATACAG +
Preference number: 4 (lower is better)
Translates to: PLTCSKDLLNTVAAVLAKPWTQC*KVHGIQ
Trigger: CTGTATACCATGAACCTTCCAGCATTGGGTCCATGG...TTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTTGAACAAGTCAGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp ATAAAACAGTTCCCATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACTTTGACAAACCATGCTaGGATAGTGCACTCTCAGTC +
Preference number: 4 (lower is better)
Translates to: IKQFPYMQTPFDSEGQTHFDKPC*DSALSV
Trigger: GACTGAGAGTGCACTATCCCAGCATGGTTTGTCAAA...GTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATGGGAACTGTTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CCA 90 bp CATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAAATATTTGACAAACCATGCTaGGATAGTGCACTCTCAGTC +
Preference number: 4 (lower is better)
Translates to: HTCRLPLTLKAKHTAIKIFDKPC*DSALSV
Trigger: GACTGAGAGTGCACTATCCCAGCATGGTTTGTCAAA...TATTTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CCA 90 bp CTTCTTGGAGACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAACTATTCGAGAGGAAGTTaGTGTGATTTCAACTTGAAT +
Preference number: 4 (lower is better)
Translates to: LLGDYKRKTYWHLSQPHNYSRGS*CDFNLN
Trigger: ATTCAAGTTGAAATCACACCAACTTCCTCTCGAATA...GTTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTCTCCAAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp CTGTTTTCAGATTGGCTTCCTGACCAGGAGCTAGAGAATTCCTGGAGTTGTGCCCCCTTATTGACATGCTaGTTACTGCATTTCTTGATA +
Preference number: 4 (lower is better)
Translates to: LFSDWLPDQELENSWSCAPLLTC*LLHFLI
Trigger: TATCAAGAAATGCAGTAACCAGCATGTCAATAAGGG...GGCACAACTCCAGGAATTCTCTAGCTCCTGGTCAGGAAGCCAATCTGAAAACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CCA 90 bp GCAACCAGCAATGGCTCTGGATATAATTCTAGCTGGGCTCTGTATATAATATCACCTCCTGACCGTCTGTaGTTCTTTCCTATACTTGGC +
Preference number: 4 (lower is better)
Translates to: ATSNGSGYNSSWALYIISPPDRL*FFPILG
Trigger: GCCAAGTATAGGAAAGAACCACAGACGGTCAGGAGG...TGATATTATATACAGAGCCCAGCTAGAATTATATCCAGAGCCATTGCTGGTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp ACCACTGACTTGTTCAAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAGTCTTAGCCAAACCATaGCTACTAGGCTTAGGTAGG +
Preference number: 4 (lower is better)
Translates to: TTDLFKGFTKYSRCGLSQVLAKP*LLGLGR
Trigger: CCTACCTAAGCCTAGTAGCCATGGTTTGGCTAAGAC...TTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTTGAACAAGTCAGTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp TTAATTCTGTATTTCCATGTCTTTTCCACCTATGACCCCTTATTGACATGCTGGGAGCTAGAGAATTCCTaGAGTTGTGCCTCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: LILYFHVFSTYDPLLTCWELENS*SCASAP
Trigger: TGGGGCAGAGGCACAACTCCAGGAATTCTCTAGCTC...CCAGCATGTCAATAAGGGGTCATAGGTGGAAAAGACATGGAAATACAGAATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp TCTGAGCTCTGCATAAGCAGGAACAAGAGGAAAACACTAGCATGCTCTCTTGGTAGATCCTCTGAAATATaGGGTGCAAGACCCCAATTT +
Preference number: 4 (lower is better)
Translates to: SELCISRNKRKTLACSLGRSSEI*GARPQF
Trigger: AAATTGGGGTCTTGCACCCCATATTTCAGAGGATCT...ACCAAGAGAGCATGCTAGTGTTTTCCTCTTGTTCCTGCTTATGCAGAGCTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp TTTCCAAAGTCCAGCAGTAGGGTAAATCAGCTTTACAGCCTATTATACCTTAATCAGGGTGCTTTCCTGTaGCTTCAGGAAGGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: FPKSSSRVNQLYSLLYLNQGAFL*LQEGKG
Trigger: TCCCTTCCCTTCCTGAAGCCACAGGAAAGCACCCTG...ATTAAGGTATAATAGGCTGTAAAGCTGATTTACCCTACTGCTGGACTTTGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp TCCCATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAAACAAAATCACCACTCTaGTTCTCTACAAGTACCCTT +
Preference number: 4 (lower is better)
Translates to: SHTCRLPLTLKAKHTAIKTKSPL*FSTSTL
Trigger: AAGGGTACTTGTAGAGAACCAGAGTGGTGATTTTGT...TTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CCA 90 bp CTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAAGAAGCAAAGTTGGGTGAGTCAGCTATGTaGACTACTGGAGTTACTGGA +
Preference number: 4 (lower is better)
Translates to: LSGIRMKDPGYFHKEAKLGESAM*TTGVTG
Trigger: TCCAGTAACTCCAGTAGTCCACATAGCTGACTCACC...CAACTTTGCTTCTTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CCA 90 bp ACTAACTATCTGGTCACCCTCAGATGTTGTATCTTAGGATGGTCACTGCTGCTGACCCCTTCAGGGAACTaGGAAATGTATATTATGTCC +
Preference number: 4 (lower is better)
Translates to: TNYLVTLRCCILGWSLLLTPSGN*EMYIMS
Trigger: GGACATAATATACATTTCCCAGTTCCCTGAAGGGGT...CAGCAGCAGTGACCATCCTAAGATACAACATCTGAGGGTGACCAGATAGTTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CCA 90 bp ACATCAGGGCTCCTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAAATAAGCCACTGCGCCTaGCCTAGATTTTCATGTTTT +
Preference number: 4 (lower is better)
Translates to: TSGLLSGIRMKDPGYFHKISHCA*PRFSCF
Trigger: AAAACATGAAAATCTAGGCCAGGCGCAGTGGCTTAT...TTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAGGAGCCCTGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR CAA 72 bp GAGAAGCTCAAGATTCTCACTTTGGGCTCTCTGAGTTaGTTTTCGAGCAAAGTGATCTTTGCAAGATTCCCC +
Preference number: 4 (lower is better)
Translates to: EKLKILTLGSLS*FSSKVIFARFP
Trigger: GGGGAATCTTGCAAAGATCACTTTGCTCGAAAACAAACTCAGAGAGCCCAAAGTGAGAATCTTGAGCTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
3UTR CAA 72 bp CTCCCAAGTGCGATTGGTTTAAAGGCCCTGTTCTTTTaGTTTCTCCAGTCCTGTGTGGTTTCCATAACTTGT +
Preference number: 4 (lower is better)
Translates to: LPSAIGLKALFF*FLQSCVVSITC
Trigger: ACAAGTTATGGAAACCACACAGGACTGGAGAAACAAAAAGAACAGGGCCTTTAAACCAATCGCACTTGGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR TCA 90 bp TCAGGGCTCCTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAAGAACACAACCCCTTTCTCTaGAGTAAACATTTTTCCACA +
Preference number: 4 (lower is better)
Translates to: SGLLSGIRMKDPGYFHKEHNPFL*SKHFST
Trigger: TGTGGAAAAATGTTTACTTCAGAGAAAGGGGTTGTG...TTCTTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAGGAGCCCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR TCA 90 bp ACATCAGGGCTCCTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAACACAACCCCTTTCTCTaGAGTAAACATTTTTCCACA +
Preference number: 4 (lower is better)
Translates to: TSGLLSGIRMKDPGYFHKHNPFL*SKHFST
Trigger: TGTGGAAAAATGTTTACTTCAGAGAAAGGGGTTGTG...TTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAGGAGCCCTGATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR TCA 90 bp TCAAAGAGAGAAGCTCAAGATTCTCACTTTGGGCTCTCTGAGTTTGTTTTCGAGTTGCACCATGAATCCTaGAGAAACTGGTATCCTGCT +
Preference number: 4 (lower is better)
Translates to: SKREAQDSHFGLSEFVFELHHES*RNWYPA
Trigger: AGCAGGATACCAGTTTCTTCAGGATTCATGGTGCAA...CTCGAAAACAAACTCAGAGAGCCCAAAGTGAGAATCTTGAGCTTCTCTCTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp TCAAAGAGAGAAGCTCAAGATTCTCACTTTGGGCTCTCTGAGTTTGTTTTCGAGTCATCCAGTGCTTTTTaGGCTAGATCCCATTCTCCA +
Preference number: 4 (lower is better)
Translates to: SKREAQDSHFGLSEFVFESSSAF*ARSHSP
Trigger: TGGAGAATGGGATCTAGCTCAAAAAGCACTGGATGA...CTCGAAAACAAACTCAGAGAGCCCAAAGTGAGAATCTTGAGCTTCTCTCTTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp GTCTTTTCCACCTATGACCCCTTATTGACATGCTGGTTACTGCATTTCTTGATAGGGACCATGAGGCAATaGAGCCTTTATTGCATTAGC +
Preference number: 4 (lower is better)
Translates to: VFSTYDPLLTCWLLHFLIGTMRQ*SLYCIS
Trigger: GCTAATGCAATAAAGGCTTCATTGCCTCATGGTCCC...TATCAAGAAATGCAGTAACCAGCATGTCAATAAGGGGTCATAGGTGGAAAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp CATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAAATAGGTGTGATTTCAACTTaGATACACCTTGTACCTTCC +
Preference number: 4 (lower is better)
Translates to: HTCRLPLTLKAKHTAIKIGVIST*IHLVPS
Trigger: GGAAGGTACAAGGTGTATTCAAGTTGAAATCACACC...TATTTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR TCA 90 bp ATAAAACAGTTCCCATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACGGTTACTGCATTTCTTaGTATTCGAGAGGAAGTTGG +
Preference number: 4 (lower is better)
Translates to: IKQFPYMQTPFDSEGQTHGYCIS*YSRGSW
Trigger: CCAACTTCCTCTCGAATATCAAGAAATGCAGTAACC...GTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATGGGAACTGTTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR TCA 90 bp CTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAAGAAGCAAAGTTGTGTCTTTTCCACCTATaGCCCCTTATTGACATGCTG +
Preference number: 4 (lower is better)
Translates to: LSGIRMKDPGYFHKEAKLCLFHL*PLIDML
Trigger: CAGCATGTCAATAAGGGGTCATAGGTGGAAAAGACA...CAACTTTGCTTCTTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR TCA 90 bp CTGTATTTCCATGTCTTTTCCACCTATGACCCCTTATTGACATGCTGGTTACTGTGTCTTTTCCACCTATaGCCCCTTATTGACATGCTG +
Preference number: 4 (lower is better)
Translates to: LYFHVFSTYDPLLTCWLLCLFHL*PLIDML
Trigger: CAGCATGTCAATAAGGGGTCATAGGTGGAAAAGACA...CAGTAACCAGCATGTCAATAAGGGGTCATAGGTGGAAAAGACATGGAAATACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp ACCACTGACTTGTTCAAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACACCCTGTATATGCTaGGCATCAATCTCTCCTAGT +
Preference number: 4 (lower is better)
Translates to: TTDLFKGFTKYSRCGLSQTPCIC*ASISPS
Trigger: ACTAGGAGAGATTGATGCTCAGCATATACAGGGTGT...TTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTTGAACAAGTCAGTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409923.5
ENST00000440481.6
CDS-3UTR TCA 90 bp AAATGTTTCAGAGATAACAACAGAAATGCCTCTAGCCATCCCCTGGAATCATATAGTTTTGCTTCCTCCTaGCCGTCTGTGGTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: KCFRDNNRNASSHPLESYSFASS*PSVVLS
Trigger: GGAAAGAACCACAGACGGTCAGGAGGAAGCAAAACT...ATATGATTCCAGGGGATGGCTAGAGGCATTTCTGTTGTTATCTCTGAAACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR TCA 90 bp ACAAGATACCAGATAATGCCAATCCTACTTACTGGTCCTCAGACCACACAGCTATGTTTTCGAGCAAAGTaGTCTTTGCAAGATTCCCCT +
Preference number: 4 (lower is better)
Translates to: TRYQIMPILLTGPQTTQLCFRAK*SLQDSP
Trigger: AGGGGAATCTTGCAAAGATCACTTTGCTCGAAAACA...TAGCTGTGTGGTCTGAGGACCAGTAAGTAGGATTGGCATTATCTGGTATCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp CTCTCTCTCACTCTGAATGATGACTTAAGTACATTTGCTTTACAGGGGAACCGCTGTTTTCGAGCAAAGTaGTCTTTGCAAGATTCCCCT +
Preference number: 4 (lower is better)
Translates to: LSLTLNDDLSTFALQGNRCFRAK*SLQDSP
Trigger: AGGGGAATCTTGCAAAGATCACTTTGCTCGAAAACA...GCGGTTCCCCTGTAAAGCAAATGTACTTAAGTCATCATTCAGAGTGAGAGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp CCAGATTTGGCAAATTCCATAATGGAAGAAGTAGCTGCAGAATGTCTGCTCACTTCACTTTGGGCTCTCTaGGTTTGTTTTCGAGCAAAG +
Preference number: 4 (lower is better)
Translates to: PDLANSIMEEVAAECLLTSLWAL*VCFRAK
Trigger: CTTTGCTCGAAAACAAACTCAGAGAGCCCAAAGTGA...AGTGAGCAGACATTCTGCAGCTACTTCTTCCATTATGGAATTTGCCAAATCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR TCA 90 bp ATGTGGGACTGTGACACCACTGACTTGTTCAAAGGATTTACTAAATACAGTCGCTCACTTTGGGCTCTCTaGGTTTGTTTTCGAGCAAAG +
Preference number: 4 (lower is better)
Translates to: MWDCDTTDLFKGFTKYSRSLWAL*VCFRAK
Trigger: CTTTGCTCGAAAACAAACTCAGAGAGCCCAAAGTGA...GCGACTGTATTTAGTAAATCCTTTGAACAAGTCAGTGGTGTCACAGTCCCACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp TTAATTCTGTATTTCCATGTCTTTTCCACCTATGACCCCTTATTGACATGCTGGACAACCAACAGCAGATaGCGGGTTATGTGGGACTGT +
Preference number: 4 (lower is better)
Translates to: LILYFHVFSTYDPLLTCWTTNSR*RVMWDC
Trigger: ACAGTCCCACATAACCCGTCATCTGCTGTTGGTTGT...CCAGCATGTCAATAAGGGGTCATAGGTGGAAAAGACATGGAAATACAGAATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp GTGAGACCACTGGGAATTCTACATATTAGACGAGTAATTTGTTTGCACTCTGATACAACCAACAGCAGATaGCGGGTTATGTGGGACTGT +
Preference number: 4 (lower is better)
Translates to: VRPLGILHIRRVICLHSDTTNSR*RVMWDC
Trigger: ACAGTCCCACATAACCCGTCATCTGCTGTTGGTTGT...ATCAGAGTGCAAACAAATTACTCGTCTAATATGTAGAATTCCCAGTGGTCTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp TCTTCAAAGAGAGAAGCTCAAGATTCTCACTTTGGGCTCTCTGAGTTTGTTTTCTGTCAGGAATACGGATaGAAGACCCAGGGTACTTTC +
Preference number: 4 (lower is better)
Translates to: SSKREAQDSHFGLSEFVFCQEYG*KTQGTF
Trigger: GAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACA...GAAAACAAACTCAGAGAGCCCAAAGTGAGAATCTTGAGCTTCTCTCTTTGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp GGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTAGGCTTCCTTACAACCTCACATaGGACATAACCAACTTGATT +
Preference number: 4 (lower is better)
Translates to: GFTKYSRCGLSQTMATRLPYNLT*DITNLI
Trigger: AATCAAGTTGGTTATGTCTCATGTGAGGTTGTAAGG...AAGCCTAGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp CCTTCAGAATTTAAGACATCAGGGCTCCTGTCAGGAATACGGATGAAAGACCCATTGCAAGATTTACACTaGTTTCCAGGAAGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: PSEFKTSGLLSGIRMKDPLQDLH*FPGSLP
Trigger: TGGAAGACTTCCTGGAAATCAGTGTAAATCTTGCAA...TGGGTCTTTCATCCGTATTCCTGACAGGAGCCCTGATGTCTTAAATTCTGAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR TCA 90 bp ATCTCTCAGCTCTGTCAGCTAACATTTCCCCAAACTTATTCTACAATGTTTCCTGCTGTGCAGTCACAGTaGAAAAGAGCCAAGAACTGG +
Preference number: 4 (lower is better)
Translates to: ISQLCQLTFPQTYSTMFPAVQSQ*KRAKNW
Trigger: CCAGTTCTTGGCTCTTTTTCACTGTGACTGCACAGC...AGGAAACATTGTAGAATAAGTTTGGGGAAATGTTAGCTGACAGAGCTGAGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp AAATGTTTCAGAGATAACAACAGAAATGCCTCTAGCCATCCCCTGGAATCATATGCTGTGCAGTCACAGTaGAAAAGAGCCAAGAACTGG +
Preference number: 4 (lower is better)
Translates to: KCFRDNNRNASSHPLESYAVQSQ*KRAKNW
Trigger: CCAGTTCTTGGCTCTTTTTCACTGTGACTGCACAGC...ATATGATTCCAGGGGATGGCTAGAGGCATTTCTGTTGTTATCTCTGAAACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp TTAATTCTGTATTTCCATGTCTTTTCCACCTATGACCCCTTATTGACATGCTGGAGCATGCTCTCTTGGTaGCTACAGCAAGGGACTATG +
Preference number: 4 (lower is better)
Translates to: LILYFHVFSTYDPLLTCWSMLSW*LQQGTM
Trigger: CATAGTCCCTTGCTGTAGTCACCAAGAGAGCATGCT...CCAGCATGTCAATAAGGGGTCATAGGTGGAAAAGACATGGAAATACAGAATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp ATTTCCATAGTGGTATACAAAGGACTCCAGGGTGCTTTCCTGTGGCTTCAGGAACGAGTTCATGCTTTTTaGAGAACTCGGTTTAAACTG +
Preference number: 4 (lower is better)
Translates to: ISIVVYKGLQGAFLWLQERVHAF*RTRFKL
Trigger: CAGTTTAAACCGAGTTCTTCAAAAAGCATGAACTCG...TTCCTGAAGCCACAGGAAAGCACCCTGGAGTCCTTTGTATACCACTATGGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp CCAGGAGCTAGAGAATTCCTGGAGTTGTGCCTCTGCCCCATTCTCTATAAAACATACAGTGATAGAACATaGAAATCTGATCTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: PGAREFLELCLCPILYKTYSDRT*KSDLSA
Trigger: AGCTGAGAGATCAGATTTTCATGTTCTATCACTGTA...TGTTTTATAGAGAATGGGGCAGAGGCACAACTCCAGGAATTCTCTAGCTCCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp CTTTTCCTCCAGTTTTGCTTCCTCCTGACCGTCTGTGGTTCTTTCCTATACTTGCTAGAGAGGTCTAAATaGGGTTCCATTACAGTGATA +
Preference number: 4 (lower is better)
Translates to: LFLQFCFLLTVCGSFLYLLERSK*GSITVI
Trigger: TATCACTGTAATGGAACCTCATTTAGACCTCTCTAG...CAAGTATAGGAAAGAACCACAGACGGTCAGGAGGAAGCAAAACTGGAGGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440481.6
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp AGCAGGAACAAGAGGAAAACACTAGCATGCTCTCTTGGTGACTACAGCAAGGGACCCAATTTTCAAATTTaGAAGTTCAGTGGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: SRNKRKTLACSLGDYSKGPNFQI*KFSGEK
Trigger: TTTCTCCCCACTGAACTTTCAAATTTGAAAATTGGG...TCCCTTGCTGTAGTCACCAAGAGAGCATGCTAGTGTTTTCCTCTTGTTCCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp CTCCAGTTTTGCTTCCTCCTGACCGTCTGTGGTTCTTTCCTATACTTGGCTTGTATCTTTATAAGAAAGTaGCCTACAAAAGCTACCCCA +
Preference number: 4 (lower is better)
Translates to: LQFCFLLTVCGSFLYLACIFIRK*PTKATP
Trigger: TGGGGTAGCTTTTGTAGGTCACTTTCTTATAAAGAT...ACAAGCCAAGTATAGGAAAGAACCACAGACGGTCAGGAGGAAGCAAAACTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000440481.6
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp TCTGAGCTCTGCATAAGCAGGAACAAGAGGAAAACACTAGCATGCTCTCTTGGTTCTGGGACAGTCCCTTaGAAAGTCTATTTTTGTTTC +
Preference number: 4 (lower is better)
Translates to: SELCISRNKRKTLACSLGSGTVP*KVYFCF
Trigger: GAAACAAAAATAGACTTTTCAAGGGACTGTCCCAGA...ACCAAGAGAGCATGCTAGTGTTTTCCTCTTGTTCCTGCTTATGCAGAGCTCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp CCAGGAGCTAGAGAATTCCTGGAGTTGTGCCTCTGCCCCATTCTCTATAAAACACAACTCTTCAAGTCTTaGGAGCTTGCCTTAAAAATT +
Preference number: 4 (lower is better)
Translates to: PGAREFLELCLCPILYKTQLFKS*ELALKI
Trigger: AATTTTTAAGGCAAGCTCTCAAGACTTGAAGAGTTG...TGTTTTATAGAGAATGGGGCAGAGGCACAACTCCAGGAATTCTCTAGCTCCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp CCAGGAGCTAGAGAATTCCTGGAGTTGTGCCTCTGCCCCATTCTCTATAAAACATATCCAATTCATTGCTaGCAGCTACTAGACCATATT +
Preference number: 4 (lower is better)
Translates to: PGAREFLELCLCPILYKTYPIHC*QLLDHI
Trigger: AATATGGTCTAGTAGCTGTCAGCAATGAATTGGATA...TGTTTTATAGAGAATGGGGCAGAGGCACAACTCCAGGAATTCTCTAGCTCCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR TCA 90 bp CTCTCTCTCACTCTGAATGATGACTTAAGTACATTTGCTTTACAGGGGAACCGCCTTACTTTCTGGTTCTaGCACACAACCAAATCAAGG +
Preference number: 4 (lower is better)
Translates to: LSLTLNDDLSTFALQGNRLTFWF*HTTKSR
Trigger: CCTTGATTTGGTTGTGTGTCAGAACCAGAAAGTAAG...GCGGTTCCCCTGTAAAGCAAATGTACTTAAGTCATCATTCAGAGTGAGAGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR GCA 90 bp TTCAAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTACTGCTCCTCTCCACTaGGATAGAATTCAAAGAGCT +
Preference number: 4 (lower is better)
Translates to: FKGFTKYSRCGLSQTMATTAPLH*DRIQRA
Trigger: AGCTCTTTGAATTCTATCGCAGTGGAGAGGAGCAGT...AGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
CDS-3UTR GCA 90 bp CTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAAGAAGCAAAGTTGACTGCTCCTCTCCACTaGGATAGAATTCAAAGAGCT +
Preference number: 4 (lower is better)
Translates to: LSGIRMKDPGYFHKEAKLTAPLH*DRIQRA
Trigger: AGCTCTTTGAATTCTATCGCAGTGGAGAGGAGCAGT...CAACTTTGCTTCTTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681766.1
CDS-3UTR GCA 90 bp GGGTTATGTGGGACTGTGACACCACTGACTTGTTCAAAGGATTTACTAAATACAATGCATCCACTGCTATaGACATTTCTGCTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: GLCGTVTPLTCSKDLLNTMHPLL*TFLLAE
Trigger: CTCAGCCAGCAGAAATGTGCATAGCAGTGGATGCAT...TGTATTTAGTAAATCCTTTGAACAAGTCAGTGGTGTCACAGTCCCACATAACCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681402.1
CDS-3UTR GCA 90 bp GAATTCCTGGAGTTGTGCCTCTGCCCCATTCTCTATAAAACAGTTCCCATACATGAAGAAGAGCTTCAATaGATCCACTGCTATGCACAT +
Preference number: 4 (lower is better)
Translates to: EFLELCLCPILYKTVPIHEEELQ*IHCYAH
Trigger: ATGTGCATAGCAGTGGATGCATTGAAGCTCTTCTTC...ATGTATGGGAACTGTTTTATAGAGAATGGGGCAGAGGCACAACTCCAGGAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR GCA 90 bp GGGTTATGTGGGACTGTGACACCACTGACTTGTTCAAAGGATTTACTAAATACAGAGCCATGGACCCAATaGTGGAAGGTTCATGGTATA +
Preference number: 4 (lower is better)
Translates to: GLCGTVTPLTCSKDLLNTEPWTQ*WKVHGI
Trigger: TATACCATGAACCTTCCAGCATTGGGTCCATGGCTC...TGTATTTAGTAAATCCTTTGAACAAGTCAGTGGTGTCACAGTCCCACATAACCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp ATAAAGTCAGGGGAGCCTTCAGAATTTAAGACATCAGGGCTCCTGTCAGGAATAACTTTTGACAAACCATaGTGGGATAGTGCACTCTCA +
Preference number: 4 (lower is better)
Translates to: IKSGEPSEFKTSGLLSGITFDKP*WDSALS
Trigger: TGAGAGTGCACTATCCCAGCATGGTTTGTCAAAAGT...TATTCCTGACAGGAGCCCTGATGTCTTAAATTCTGAAGGCTCCCCTGACTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR GCA 90 bp ACTGTGACACCACTGACTTGTTCAAAGGATTTACTAAATACAGTCGCTGCGGTCACTTTTGACAAACCATaGTGGGATAGTGCACTCTCA +
Preference number: 4 (lower is better)
Translates to: TVTPLTCSKDLLNTVAAVTFDKP*WDSALS
Trigger: TGAGAGTGCACTATCCCAGCATGGTTTGTCAAAAGT...GACCGCAGCGACTGTATTTAGTAAATCCTTTGAACAAGTCAGTGGTGTCACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp CTGACTTGTTCAAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATTCAAACCGATTCTGTaGTGTCAGCATCTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: LTCSKDLLNTVAAVLAKPFKPIL*CQHLPL
Trigger: CAAAGGGAGATGCTGACAGCACAGAATCGGTTTGAA...TGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTTGAACAAGTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp CCACTGACTTGTTCAAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAATTCAAACCGATTCTGTaGTGTCAGCATCTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: PLTCSKDLLNTVAAVLAKFKPIL*CQHLPL
Trigger: CAAAGGGAGATGCTGACAGCACAGAATCGGTTTGAA...TTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTTGAACAAGTCAGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp GATGACGGGTTATGTGGGACTGTGACACCACTGACTTGTTCAAAGGATTTACTAGACCCCTTATTGACATaGTGGTTACTGCATTTCTTG +
Preference number: 4 (lower is better)
Translates to: DDGLCGTVTPLTCSKDLLDPLLT*WLLHFL
Trigger: CAAGAAATGCAGTAACCAGCATGTCAATAAGGGGTC...TAGTAAATCCTTTGAACAAGTCAGTGGTGTCACAGTCCCACATAACCCGTCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp AAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTAGGGACCCCTTATTGACATaGTGGTTACTGCATTTCTTG +
Preference number: 4 (lower is better)
Translates to: KGFTKYSRCGLSQTMATRDPLLT*WLLHFL
Trigger: CAAGAAATGCAGTAACCAGCATGTCAATAAGGGGTC...CCTAGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp ACAGCAGATGACGGGTTATGTGGGACTGTGACACCACTGACTTGTTCAAAGGATTTATTGTTGTCAGGTTaGTCATGTCTTTTCCACCTA +
Preference number: 4 (lower is better)
Translates to: TADDGLCGTVTPLTCSKDLLLSG*SCLFHL
Trigger: TAGGTGGAAAAGACATGAGCAACCTGACAACAATAA...ATCCTTTGAACAAGTCAGTGGTGTCACAGTCCCACATAACCCGTCATCTGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409923.5
ENST00000440481.6
CDS-3UTR GCA 90 bp GGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTAGGCTTTTTCTTACAGATTTTTaGCTCCTGATCTCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: GFTKYSRCGLSQTMATRLFLTDF*LLISGK
Trigger: CTTGCCAGAGATCAGGAGGCAAAAATCTGTAAGAAA...AAGCCTAGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409923.5
ENST00000440481.6
CDS-3UTR GCA 90 bp ACCACTGACTTGTTCAAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACTAAATACAGTCGCTaGGGTCTTAGCCAAACCATG +
Preference number: 4 (lower is better)
Translates to: TTDLFKGFTKYSRCGLSQTKYSR*GLSQTM
Trigger: CATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGT...TTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTTGAACAAGTCAGTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp GTCTCTTCAAAGAGAGAAGCTCAAGATTCTCACTTTGGGCTCTCTGAGTTTGTTACTAAATACAGTCGCTaGGGTCTTAGCCAAACCATG +
Preference number: 4 (lower is better)
Translates to: VSSKREAQDSHFGLSEFVTKYSR*GLSQTM
Trigger: CATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGT...AACAAACTCAGAGAGCCCAAAGTGAGAATCTTGAGCTTCTCTCTTTGAAGAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp CCTGGAATAAAATCCCTCGTCAACTTCAGATATCTCCATCAGTTCTTCTTGACCAACAGTTCCCATACATaGAGACTCCCTTTGACTCTG +
Preference number: 4 (lower is better)
Translates to: PGIKSLVNFRYLHQFFLTNSSHT*RLPLTL
Trigger: CAGAGTCAAAGGGAGTCTGCATGTATGGGAACTGTT...GGTCAAGAAGAACTGATGGAGATATCTGAAGTTGACGAGGGATTTTATTCCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp ATGTGGGACTGTGACACCACTGACTTGTTCAAAGGATTTACTAAATACAGTCGCAACAGTTCCCATACATaGAGACTCCCTTTGACTCTG +
Preference number: 4 (lower is better)
Translates to: MWDCDTTDLFKGFTKYSRNSSHT*RLPLTL
Trigger: CAGAGTCAAAGGGAGTCTGCATGTATGGGAACTGTT...GCGACTGTATTTAGTAAATCCTTTGAACAAGTCAGTGGTGTCACAGTCCCACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp TGTTCAAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTGGAGTTGTGCCTCTaGCCCATTCTCTATAAAACA +
Preference number: 4 (lower is better)
Translates to: CSKDLLNTVAAVLAKPWLLELCL*PILYKT
Trigger: TGTTTTATAGAGAATGGGGCAGAGGCACAACTCCAG...TAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTTGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp CCAGATTTGGCAAATTCCATAATGGAAGAAGTAGCTGCAGAATGTCTGCTCACTAGGAAAACACTAGCATaGTCTCTTGGTGACTACAGC +
Preference number: 4 (lower is better)
Translates to: PDLANSIMEEVAAECLLTRKTLA*SLGDYS
Trigger: GCTGTAGTCACCAAGAGAGCATGCTAGTGTTTTCCT...AGTGAGCAGACATTCTGCAGCTACTTCTTCCATTATGGAATTTGCCAAATCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR GCA 90 bp TGTTCAAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTAAGGAAAACACTAGCATaGTCTCTTGGTGACTACAGC +
Preference number: 4 (lower is better)
Translates to: CSKDLLNTVAAVLAKPWLRKTLA*SLGDYS
Trigger: GCTGTAGTCACCAAGAGAGCATGCTAGTGTTTTCCT...TAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTTGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440481.6
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp GAATTCCTGGAGTTGTGCCTCTGCCCCATTCTCTATAAAACAGTTCCCATACATCATATATCTGAGCTCTaGATAAGCAGGAACAAGAGG +
Preference number: 4 (lower is better)
Translates to: EFLELCLCPILYKTVPIHHISEL*ISRNKR
Trigger: CCTCTTGTTCCTGCTTATGCAGAGCTCAGATATATG...ATGTATGGGAACTGTTTTATAGAGAATGGGGCAGAGGCACAACTCCAGGAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp ATAAAGTCAGGGGAGCCTTCAGAATTTAAGACATCAGGGCTCCTGTCAGGAATACATATATCTGAGCTCTaGATAAGCAGGAACAAGAGG +
Preference number: 4 (lower is better)
Translates to: IKSGEPSEFKTSGLLSGIHISEL*ISRNKR
Trigger: CCTCTTGTTCCTGCTTATGCAGAGCTCAGATATATG...TATTCCTGACAGGAGCCCTGATGTCTTAAATTCTGAAGGCTCCCCTGACTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp ATAAAACAGTTCCCATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACTGTCCAGAGTATAAATaGTTTGGCAGCCTTCAAAGC +
Preference number: 4 (lower is better)
Translates to: IKQFPYMQTPFDSEGQTHCPEYK*FGSLQS
Trigger: GCTTTGAAGGCTGCCAAAGCATTTATACTCTGGACA...GTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATGGGAACTGTTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp GATGACGGGTTATGTGGGACTGTGACACCACTGACTTGTTCAAAGGATTTACTAGTTTCACTGCCCGATTaGCTTACAGTTCTTAACTAC +
Preference number: 4 (lower is better)
Translates to: DDGLCGTVTPLTCSKDLLVSLPD*LTVLNY
Trigger: GTAGTTAAGAACTGTAAGGCAATCGGGCAGTGAAAC...TAGTAAATCCTTTGAACAAGTCAGTGGTGTCACAGTCCCACATAACCCGTCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440481.6
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp ACTAACTATCTGGTCACCCTCAGATGTTGTATCTTAGGATGGTCACTGCTGCTGAATATCAAGTTTCACTaGCCGATTGCCTTACAGTTC +
Preference number: 4 (lower is better)
Translates to: TNYLVTLRCCILGWSLLLNIKFH*PIALQF
Trigger: GAACTGTAAGGCAATCGGGCAGTGAAACTTGATATT...CAGCAGCAGTGACCATCCTAAGATACAACATCTGAGGGTGACCAGATAGTTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR GCA 90 bp ATTCTGTGCTGTCAGCATCTCCCTTTGAGGATGAGGTCCACTGTATACCACTTTAATATCAAGTTTCACTaGCCGATTGCCTTACAGTTC +
Preference number: 4 (lower is better)
Translates to: ILCCQHLPLRMRSTVYHFNIKFH*PIALQF
Trigger: GAACTGTAAGGCAATCGGGCAGTGAAACTTGATATT...AAAGTGGTATACAGTGGACCTCATCCTCAAAGGGAGATGCTGACAGCACAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp ACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAAATAGGACAGGCATCATTTAAATaGCGAGAATTCCAACTCTTC +
Preference number: 4 (lower is better)
Translates to: TCRLPLTLKAKHTAIKIGQASFK*REFQLF
Trigger: GAAGAGTTGGAATTCTCGGCATTTAAATGATGCCTG...TCCTATTTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp CATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAAATATACGATCAGTTAGCATaGCGTACTTATGACCTGTCA +
Preference number: 4 (lower is better)
Translates to: HTCRLPLTLKAKHTAIKIYDQLA*RTYDLS
Trigger: TGACAGGTCATAAGTACGGCATGCTAACTGATCGTA...TATTTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR GCA 90 bp CATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAAATAATGTTAACTCTTTTCTaGACACCTTCTCTCTGGCGT +
Preference number: 4 (lower is better)
Translates to: HTCRLPLTLKAKHTAIKIMLTLF*TPSLWR
Trigger: ACGCCAGAGAGAAGGTGTGCAGAAAAGAGTTAACAT...TATTTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CCA 90 bp AATGATGACTTAAGTACATTTGCTTTACAGGGGAACCGCAACCATAGCCAAAAGCCATGGACCCAATGCTaGAAGGTTCATGGTATACAG +
Preference number: 4 (lower is better)
Translates to: NDDLSTFALQGNRNHSQKPWTQC*KVHGIQ
Trigger: CTGTATACCATGAACCTTCCAGCATTGGGTCCATGG...CTTTTGGCTATGGTTGCGGTTCCCCTGTAAAGCAAATGTACTTAAGTCATCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp ACTCGGTTTAAACTGGTAGCCAAAGCAGTTGCAGTTAAAACTATGTCCAGAGTACCATGGACCCAATGCTaGAAGGTTCATGGTATACAG +
Preference number: 4 (lower is better)
Translates to: TRFKLVAKAVAVKTMSRVPWTQC*KVHGIQ
Trigger: CTGTATACCATGAACCTTCCAGCATTGGGTCCATGG...TACTCTGGACATAGTTTTAACTGCAACTGCTTTGGCTACCAGTTTAAACCGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp GTGAGACCACTGGGAATTCTACATATTAGACGAGTAATTTGTTTGCACTCTGATTTTGATAAACCCGACTaGCTGGTACTAGACGCAGCC +
Preference number: 4 (lower is better)
Translates to: VRPLGILHIRRVICLHSDFDKPD*LVLDAA
Trigger: GGCTGCGTCTAGTACCAGCCAGTCGGGTTTATCAAA...ATCAGAGTGCAAACAAATTACTCGTCTAATATGTAGAATTCCCAGTGGTCTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp GTGAGACCACTGGGAATTCTACATATTAGACGAGTAATTTGTTTGCACTCTGATCCTCCTGACCGTCTGTaGTTCTTTCCTATACTTGGC +
Preference number: 4 (lower is better)
Translates to: VRPLGILHIRRVICLHSDPPDRL*FFPILG
Trigger: GCCAAGTATAGGAAAGAACCACAGACGGTCAGGAGG...ATCAGAGTGCAAACAAATTACTCGTCTAATATGTAGAATTCCCAGTGGTCTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp ATAAAGTCAGGGGAGCCTTCAGAATTTAAGACATCAGGGCTCCTGTCAGGAATAGGCTTAGGTAGGGATTaGCTGGTTGTTAAAGTAAGT +
Preference number: 4 (lower is better)
Translates to: IKSGEPSEFKTSGLLSGIGLGRD*LVVKVS
Trigger: ACTTACTTTAACAACCAGCCAATCCCTACCTAAGCC...TATTCCTGACAGGAGCCCTGATGTCTTAAATTCTGAAGGCTCCCCTGACTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CCA 90 bp GAATTCCTGGAGTTGTGCCTCTGCCCCATTCTCTATAAAACAGTTCCCATACATGGCTTAGGTAGGGATTaGCTGGTTGTTAAAGTAAGT +
Preference number: 4 (lower is better)
Translates to: EFLELCLCPILYKTVPIHGLGRD*LVVKVS
Trigger: ACTTACTTTAACAACCAGCCAATCCCTACCTAAGCC...ATGTATGGGAACTGTTTTATAGAGAATGGGGCAGAGGCACAACTCCAGGAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CCA 90 bp ACTGTGACACCACTGACTTGTTCAAAGGATTTACTAAATACAGTCGCTGCGGTCGGCTTAGGTAGGGATTaGCTGGTTGTTAAAGTAAGT +
Preference number: 4 (lower is better)
Translates to: TVTPLTCSKDLLNTVAAVGLGRD*LVVKVS
Trigger: ACTTACTTTAACAACCAGCCAATCCCTACCTAAGCC...GACCGCAGCGACTGTATTTAGTAAATCCTTTGAACAAGTCAGTGGTGTCACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp ACTCGGTTTAAACTGGTAGCCAAAGCAGTTGCAGTTAAAACTATGTCCAGAGTAGTCTTAGCCAAACCATaGCTACTAGGCTTAGGTAGG +
Preference number: 4 (lower is better)
Translates to: TRFKLVAKAVAVKTMSRVVLAKP*LLGLGR
Trigger: CCTACCTAAGCCTAGTAGCCATGGTTTGGCTAAGAC...TACTCTGGACATAGTTTTAACTGCAACTGCTTTGGCTACCAGTTTAAACCGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp TCCCATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAAATAAGCTTTTCTTCTTaGAGACTACAAGCGGAAAAC +
Preference number: 4 (lower is better)
Translates to: SHTCRLPLTLKAKHTAIKISFSS*RLQAEN
Trigger: GTTTTCCGCTTGTAGTCTCCAAGAAGAAAAGCTTAT...TTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CCA 90 bp GCAACCAGCAATGGCTCTGGATATAATTCTAGCTGGGCTCTGTATATAATATCATGCCTGTTTTCAGATTaGCTTCCTGACCAGGAGCTA +
Preference number: 4 (lower is better)
Translates to: ATSNGSGYNSSWALYIISCLFSD*LPDQEL
Trigger: TAGCTCCTGGTCAGGAAGCCAATCTGAAAACAGGCA...TGATATTATATACAGAGCCCAGCTAGAATTATATCCAGAGCCATTGCTGGTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp ACAAGATACCAGATAATGCCAATCCTACTTACTGGTCCTCAGACCACACAGCTAAGATCCTCTGAAATATaGGGTGCAAGACCCCAATTT +
Preference number: 4 (lower is better)
Translates to: TRYQIMPILLTGPQTTQLRSSEI*GARPQF
Trigger: AAATTGGGGTCTTGCACCCCATATTTCAGAGGATCT...TAGCTGTGTGGTCTGAGGACCAGTAAGTAGGATTGGCATTATCTGGTATCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp CATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAAATAAGATCCTCTGAAATATaGGGTGCAAGACCCCAATTT +
Preference number: 4 (lower is better)
Translates to: HTCRLPLTLKAKHTAIKIRSSEI*GARPQF
Trigger: AAATTGGGGTCTTGCACCCCATATTTCAGAGGATCT...TATTTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp ATAAAGTCAGGGGAGCCTTCAGAATTTAAGACATCAGGGCTCCTGTCAGGAATAAGATCCTCTGAAATATaGGGTGCAAGACCCCAATTT +
Preference number: 4 (lower is better)
Translates to: IKSGEPSEFKTSGLLSGIRSSEI*GARPQF
Trigger: AAATTGGGGTCTTGCACCCCATATTTCAGAGGATCT...TATTCCTGACAGGAGCCCTGATGTCTTAAATTCTGAAGGCTCCCCTGACTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp TTAACAGTAACTCTCTTCTTGGGCCTTTTACCCAGATTTGGCAAATTCCATAATGAAGCCCTGCTCACCTaGGCAAACAGCTTGTTTCTC +
Preference number: 4 (lower is better)
Translates to: LTVTLFLGLLPRFGKFHNEALLT*ANSLFL
Trigger: GAGAAACAAGCTGTTTGCCCAGGTGAGCAGGGCTTC...ATTATGGAATTTGCCAAATCTGGGTAAAAGGCCCAAGAAGAGAGTTACTGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CCA 90 bp GATCTCTCAGCTCTGTCAGCTAACATTTCCCCAAACTTATTCTACAATGTTTCCTTGTTGGAGCTCCAGTaGTACGATCAGTTAGCATGC +
Preference number: 4 (lower is better)
Translates to: DLSALSANISPNLFYNVSLLELQ*YDQLAC
Trigger: GCATGCTAACTGATCGTACCACTGGAGCTCCAACAA...GGAAACATTGTAGAATAAGTTTGGGGAAATGTTAGCTGACAGAGCTGAGAGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR TCA 90 bp ACTCGGTTTAAACTGGTAGCCAAAGCAGTTGCAGTTAAAACTATGTCCAGAGTATTGCACCATGAATCCTaGAGAAACTGGTATCCTGCT +
Preference number: 4 (lower is better)
Translates to: TRFKLVAKAVAVKTMSRVLHHES*RNWYPA
Trigger: AGCAGGATACCAGTTTCTTCAGGATTCATGGTGCAA...TACTCTGGACATAGTTTTAACTGCAACTGCTTTGGCTACCAGTTTAAACCGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp GGGTTATGTGGGACTGTGACACCACTGACTTGTTCAAAGGATTTACTAAATACATTGCACCATGAATCCTaGAGAAACTGGTATCCTGCT +
Preference number: 4 (lower is better)
Translates to: GLCGTVTPLTCSKDLLNTLHHES*RNWYPA
Trigger: AGCAGGATACCAGTTTCTTCAGGATTCATGGTGCAA...TGTATTTAGTAAATCCTTTGAACAAGTCAGTGGTGTCACAGTCCCACATAACCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp TCTGAGCTCTGCATAAGCAGGAACAAGAGGAAAACACTAGCATGCTCTCTTGGTTTAACATTTGCACCATaGATCCTGAAGAAACTGGTA +
Preference number: 4 (lower is better)
Translates to: SELCISRNKRKTLACSLGLTFAP*ILKKLV
Trigger: TACCAGTTTCTTCAGGATTCATGGTGCAAATGTTAA...ACCAAGAGAGCATGCTAGTGTTTTCCTCTTGTTCCTGCTTATGCAGAGCTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp CTGTATTTCCATGTCTTTTCCACCTATGACCCCTTATTGACATGCTGGTTACTGGGTGTGATTTCAACTTaGATACACCTTGTACCTTCC +
Preference number: 4 (lower is better)
Translates to: LYFHVFSTYDPLLTCWLLGVIST*IHLVPS
Trigger: GGAAGGTACAAGGTGTATTCAAGTTGAAATCACACC...CAGTAACCAGCATGTCAATAAGGGGTCATAGGTGGAAAAGACATGGAAATACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp CCTGGAATAAAATCCCTCGTCAACTTCAGATATCTCCATCAGTTCTTCTTGACCGAGAGGAAGTTGGTGTaGTTTCAACTTGAATACACC +
Preference number: 4 (lower is better)
Translates to: PGIKSLVNFRYLHQFFLTERKLV*FQLEYT
Trigger: GGTGTATTCAAGTTGAAATCACACCAACTTCCTCTC...GGTCAAGAAGAACTGATGGAGATATCTGAAGTTGACGAGGGATTTTATTCCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp TCAAAGAGAGAAGCTCAAGATTCTCACTTTGGGCTCTCTGAGTTTGTTTTCGAGGGTTACTGCATTTCTTaGTATTCGAGAGGAAGTTGG +
Preference number: 4 (lower is better)
Translates to: SKREAQDSHFGLSEFVFEGYCIS*YSRGSW
Trigger: CCAACTTCCTCTCGAATATCAAGAAATGCAGTAACC...CTCGAAAACAAACTCAGAGAGCCCAAAGTGAGAATCTTGAGCTTCTCTCTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp GATCTCTCAGCTCTGTCAGCTAACATTTCCCCAAACTTATTCTACAATGTTTCCTGTCTTTTCCACCTATaGCCCCTTATTGACATGCTG +
Preference number: 4 (lower is better)
Translates to: DLSALSANISPNLFYNVSCLFHL*PLIDML
Trigger: CAGCATGTCAATAAGGGGTCATAGGTGGAAAAGACA...GGAAACATTGTAGAATAAGTTTGGGGAAATGTTAGCTGACAGAGCTGAGAGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp TTTCCAAAGTCCAGCAGTAGGGTAAATCAGCTTTACAGCCTATTATACCTTAATAGTTTTGCTTCCTCCTaGCCGTCTGTGGTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: FPKSSSRVNQLYSLLYLNSFASS*PSVVLS
Trigger: GGAAAGAACCACAGACGGTCAGGAGGAAGCAAAACT...ATTAAGGTATAATAGGCTGTAAAGCTGATTTACCCTACTGCTGGACTTTGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR TCA 90 bp GCAAGATTTACACTGATTTCCAGGAAGTCTTCCAATGACGTATGCTCTGAATTATGTCAGGAATACGGATaGAAGACCCAGGGTACTTTC +
Preference number: 4 (lower is better)
Translates to: ARFTLISRKSSNDVCSELCQEYG*KTQGTF
Trigger: GAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACA...TAATTCAGAGCATACGTCATTGGAAGACTTCCTGGAAATCAGTGTAAATCTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR TCA 90 bp CTTTTCCTCCAGTTTTGCTTCCTCCTGACCGTCTGTGGTTCTTTCCTATACTTGTATACAGTGGTATCTTaGGAGCTATGTTGCAAGATT +
Preference number: 4 (lower is better)
Translates to: LFLQFCFLLTVCGSFLYLYTVVS*ELCCKI
Trigger: AATCTTGCAACATAGCTCTCAAGATACCACTGTATA...CAAGTATAGGAAAGAACCACAGACGGTCAGGAGGAAGCAAAACTGGAGGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp ATTCTGTGCTGTCAGCATCTCCCTTTGAGGATGAGGTCCACTGTATACCACTTTTACAGTGATAGAACATaGAAATCTGATCTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: ILCCQHLPLRMRSTVYHFYSDRT*KSDLSA
Trigger: AGCTGAGAGATCAGATTTTCATGTTCTATCACTGTA...AAAGTGGTATACAGTGGACCTCATCCTCAAAGGGAGATGCTGACAGCACAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp CATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAAATACTAGAGAGGTCTAAATaGGGTTCCATTACAGTGATA +
Preference number: 4 (lower is better)
Translates to: HTCRLPLTLKAKHTAIKILERSK*GSITVI
Trigger: TATCACTGTAATGGAACCTCATTTAGACCTCTCTAG...TATTTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp TCTGAGCTCTGCATAAGCAGGAACAAGAGGAAAACACTAGCATGCTCTCTTGGTAGACCTAGAGTGGCATaGAATTCTGCATTTTTAACA +
Preference number: 4 (lower is better)
Translates to: SELCISRNKRKTLACSLGRPRVA*NSAFLT
Trigger: TGTTAAAAATGCAGAATTTCATGCCACTCTAGGTCT...ACCAAGAGAGCATGCTAGTGTTTTCCTCTTGTTCCTGCTTATGCAGAGCTCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp CTTTTCCTCCAGTTTTGCTTCCTCCTGACCGTCTGTGGTTCTTTCCTATACTTGAGACCTAGAGTGGCATaGAATTCTGCATTTTTAACA +
Preference number: 4 (lower is better)
Translates to: LFLQFCFLLTVCGSFLYLRPRVA*NSAFLT
Trigger: TGTTAAAAATGCAGAATTTCATGCCACTCTAGGTCT...CAAGTATAGGAAAGAACCACAGACGGTCAGGAGGAAGCAAAACTGGAGGAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000440481.6
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp GGAATGAGGTCATTGTCTTATCACTTACCCCCAAAAGCTCTCAATGGCTCAACTTCAGAACCATTTCACTaGGCAAGTCTTCAGAGATTT +
Preference number: 4 (lower is better)
Translates to: GMRSLSYHLPPKALNGSTSEPFH*ASLQRF
Trigger: AAATCTCTGAAGACTTGCTCAGTGAAATGGTTCTGA...AGTTGAGCCATTGAGAGCTTTTGGGGGTAAGTGATAAGACAATGACCTCATTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR TCA 90 bp CTCTCTCTCACTCTGAATGATGACTTAAGTACATTTGCTTTACAGGGGAACCGCTCAGAACCATTTCACTaGGCAAGTCTTCAGAGATTT +
Preference number: 4 (lower is better)
Translates to: LSLTLNDDLSTFALQGNRSEPFH*ASLQRF
Trigger: AAATCTCTGAAGACTTGCTCAGTGAAATGGTTCTGA...GCGGTTCCCCTGTAAAGCAAATGTACTTAAGTCATCATTCAGAGTGAGAGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp GAATTCCTGGAGTTGTGCCTCTGCCCCATTCTCTATAAAACAGTTCCCATACATTCAGAACCATTTCACTaGGCAAGTCTTCAGAGATTT +
Preference number: 4 (lower is better)
Translates to: EFLELCLCPILYKTVPIHSEPFH*ASLQRF
Trigger: AAATCTCTGAAGACTTGCTCAGTGAAATGGTTCTGA...ATGTATGGGAACTGTTTTATAGAGAATGGGGCAGAGGCACAACTCCAGGAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp ATCTCTCAGCTCTGTCAGCTAACATTTCCCCAAACTTATTCTACAATGTTTCCTTCTGTTCAGATCCTCTaGAATATGGGGTGCAAGACC +
Preference number: 4 (lower is better)
Translates to: ISQLCQLTFPQTYSTMFPSVQIL*NMGCKT
Trigger: GGTCTTGCACCCCATATTTCAGAGGATCTGAACAGA...AGGAAACATTGTAGAATAAGTTTGGGGAAATGTTAGCTGACAGAGCTGAGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp ACAAGATACCAGATAATGCCAATCCTACTTACTGGTCCTCAGACCACACAGCTATCTGGGACAGTCCCTTaGAAAGTCTATTTTTGTTTC +
Preference number: 4 (lower is better)
Translates to: TRYQIMPILLTGPQTTQLSGTVP*KVYFCF
Trigger: GAAACAAAAATAGACTTTTCAAGGGACTGTCCCAGA...TAGCTGTGTGGTCTGAGGACCAGTAAGTAGGATTGGCATTATCTGGTATCTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp TTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTAGGCTTAGGTATGAGTAATATTTGCTaGGCAGTTGCTTCACAATTG +
Preference number: 4 (lower is better)
Translates to: LLNTVAAVLAKPWLLGLGMSNIC*AVASQL
Trigger: CAATTGTGAAGCAACTGCTCAGCAAATATTACTCAT...ACCTAAGCCTAGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440481.6
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp GCAAGATTTACACTGATTTCCAGGAAGTCTTCCAATGACGTATGCTCTGAATTATGCTATGCACATTTCTaGTGGCTGAGACTGCAAGGT +
Preference number: 4 (lower is better)
Translates to: ARFTLISRKSSNDVCSELCYAHF*WLRLQG
Trigger: ACCTTGCAGTCTCAGCCAGCAGAAATGTGCATAGCA...TAATTCAGAGCATACGTCATTGGAAGACTTCCTGGAAATCAGTGTAAATCTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR GCA 90 bp CCTGGAATAAAATCCCTCGTCAACTTCAGATATCTCCATCAGTTCTTCTTGACCGAAGAAGAGCTTCAATaGATCCACTGCTATGCACAT +
Preference number: 4 (lower is better)
Translates to: PGIKSLVNFRYLHQFFLTEEELQ*IHCYAH
Trigger: ATGTGCATAGCAGTGGATGCATTGAAGCTCTTCTTC...GGTCAAGAAGAACTGATGGAGATATCTGAAGTTGACGAGGGATTTTATTCCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681402.1
CDS-3UTR GCA 90 bp TTCAAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTGAAGAAGAGCTTCAATaGATCCACTGCTATGCACAT +
Preference number: 4 (lower is better)
Translates to: FKGFTKYSRCGLSQTMATEEELQ*IHCYAH
Trigger: ATGTGCATAGCAGTGGATGCATTGAAGCTCTTCTTC...AGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681402.1
CDS-3UTR GCA 90 bp AAATGTTTCAGAGATAACAACAGAAATGCCTCTAGCCATCCCCTGGAATCATATGAGCCATGGACCCAATaGTGGAAGGTTCATGGTATA +
Preference number: 4 (lower is better)
Translates to: KCFRDNNRNASSHPLESYEPWTQ*WKVHGI
Trigger: TATACCATGAACCTTCCAGCATTGGGTCCATGGCTC...ATATGATTCCAGGGGATGGCTAGAGGCATTTCTGTTGTTATCTCTGAAACATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR GCA 90 bp CCACTGACTTGTTCAAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAAACTTTTGACAAACCATaGTGGGATAGTGCACTCTCA +
Preference number: 4 (lower is better)
Translates to: PLTCSKDLLNTVAAVLAKTFDKP*WDSALS
Trigger: TGAGAGTGCACTATCCCAGCATGGTTTGTCAAAAGT...TTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTTGAACAAGTCAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp CTGACTTGTTCAAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCAACTTTTGACAAACCATaGTGGGATAGTGCACTCTCA +
Preference number: 4 (lower is better)
Translates to: LTCSKDLLNTVAAVLAKPTFDKP*WDSALS
Trigger: TGAGAGTGCACTATCCCAGCATGGTTTGTCAAAAGT...TGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTTGAACAAGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp GGGTTATGTGGGACTGTGACACCACTGACTTGTTCAAAGGATTTACTAAATACATTCAAACCGATTCTGTaGTGTCAGCATCTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: GLCGTVTPLTCSKDLLNTFKPIL*CQHLPL
Trigger: CAAAGGGAGATGCTGACAGCACAGAATCGGTTTGAA...TGTATTTAGTAAATCCTTTGAACAAGTCAGTGGTGTCACAGTCCCACATAACCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp ACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAAATAGGAATCCCTGTTAACATTTaGACCATGAATCCTGAAGAA +
Preference number: 4 (lower is better)
Translates to: TCRLPLTLKAKHTAIKIGIPVNI*TMNPEE
Trigger: TTCTTCAGGATTCATGGTGCAAATGTTAACAGGGAT...TCCTATTTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR GCA 90 bp CTTTTCCTCCAGTTTTGCTTCCTCCTGACCGTCTGTGGTTCTTTCCTATACTTGTTATTGTTGTCAGGTTaGTCATGTCTTTTCCACCTA +
Preference number: 4 (lower is better)
Translates to: LFLQFCFLLTVCGSFLYLLLLSG*SCLFHL
Trigger: TAGGTGGAAAAGACATGAGCAACCTGACAACAATAA...CAAGTATAGGAAAGAACCACAGACGGTCAGGAGGAAGCAAAACTGGAGGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409923.5
ENST00000440481.6
CDS-3UTR GCA 90 bp TCAAAGAGAGAAGCTCAAGATTCTCACTTTGGGCTCTCTGAGTTTGTTTTCGAGGCTAAAACTGCACTCTaGCAGGTGAGTTTATTCCAT +
Preference number: 4 (lower is better)
Translates to: SKREAQDSHFGLSEFVFEAKTAL*QVSLFH
Trigger: ATGGAATAAACTCACCTGGCAGAGTGCAGTTTTAGC...CTCGAAAACAAACTCAGAGAGCCCAAAGTGAGAATCTTGAGCTTCTCTCTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409923.5
ENST00000440481.6
CDS-3UTR GCA 90 bp GTCTTTTCCACCTATGACCCCTTATTGACATGCTGGTTACTGCATTTCTTGATAACTAAATACAGTCGCTaGGGTCTTAGCCAAACCATG +
Preference number: 4 (lower is better)
Translates to: VFSTYDPLLTCWLLHFLITKYSR*GLSQTM
Trigger: CATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGT...TATCAAGAAATGCAGTAACCAGCATGTCAATAAGGGGTCATAGGTGGAAAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp ACTTTCATAAAGAAGCAAAGTTGTATTTCCAGGTTCACTAGGTTATGGGAGAAAACTCAGCCTCAGCCGTaGTTTCTCTCTCTCACTCTG +
Preference number: 4 (lower is better)
Translates to: TFIKKQSCISRFTRLWEKTQPQP*FLSLTL
Trigger: CAGAGTGAGAGAGAGAAAGCACGGCTGAGGCTGAGT...TTTCTCCCATAACCTAGTGAACCTGGAAATACAACTTTGCTTCTTTATGAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp ACTCGGTTTAAACTGGTAGCCAAAGCAGTTGCAGTTAAAACTATGTCCAGAGTAAGGAAAACACTAGCATaGTCTCTTGGTGACTACAGC +
Preference number: 4 (lower is better)
Translates to: TRFKLVAKAVAVKTMSRVRKTLA*SLGDYS
Trigger: GCTGTAGTCACCAAGAGAGCATGCTAGTGTTTTCCT...TACTCTGGACATAGTTTTAACTGCAACTGCTTTGGCTACCAGTTTAAACCGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp GCAACCAGCAATGGCTCTGGATATAATTCTAGCTGGGCTCTGTATATAATATCAAGGAAAACACTAGCATaGTCTCTTGGTGACTACAGC +
Preference number: 4 (lower is better)
Translates to: ATSNGSGYNSSWALYIISRKTLA*SLGDYS
Trigger: GCTGTAGTCACCAAGAGAGCATGCTAGTGTTTTCCT...TGATATTATATACAGAGCCCAGCTAGAATTATATCCAGAGCCATTGCTGGTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp CTGACTTGTTCAAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCACATATATCTGAGCTCTaGATAAGCAGGAACAAGAGG +
Preference number: 4 (lower is better)
Translates to: LTCSKDLLNTVAAVLAKPHISEL*ISRNKR
Trigger: CCTCTTGTTCCTGCTTATGCAGAGCTCAGATATATG...TGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTTGAACAAGTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440481.6
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp CTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAAGAAGCAAAGTTGTGTCCAGAGTATAAATaGTTTGGCAGCCTTCAAAGC +
Preference number: 4 (lower is better)
Translates to: LSGIRMKDPGYFHKEAKLCPEYK*FGSLQS
Trigger: GCTTTGAAGGCTGCCAAAGCATTTATACTCTGGACA...CAACTTTGCTTCTTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp TTCAAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTGTTTCACTGCCCGATTaGCTTACAGTTCTTAACTAC +
Preference number: 4 (lower is better)
Translates to: FKGFTKYSRCGLSQTMATVSLPD*LTVLNY
Trigger: GTAGTTAAGAACTGTAAGGCAATCGGGCAGTGAAAC...AGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440481.6
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp CATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAAATACAGGCATCATTTAAATaGCGAGAATTCCAACTCTTC +
Preference number: 4 (lower is better)
Translates to: HTCRLPLTLKAKHTAIKIQASFK*REFQLF
Trigger: GAAGAGTTGGAATTCTCGGCATTTAAATGATGCCTG...TATTTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp ACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAAATAGGATATTTGCTGAGCAGTTaGTTCACAATTGAAAAGAGC +
Preference number: 4 (lower is better)
Translates to: TCRLPLTLKAKHTAIKIGYLLSS*FTIEKS
Trigger: GCTCTTTTCAATTGTGAAGCAACTGCTCAGCAAATA...TCCTATTTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp CATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAAATAATTCATGGGTTTGCTTaGTTGTTTGGTTTGTCCTTC +
Preference number: 4 (lower is better)
Translates to: HTCRLPLTLKAKHTAIKIIHGFA*LFGLSF
Trigger: GAAGGACAAACCAAACAAGCAAGCAAACCCATGAAT...TATTTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR GCA 90 bp CATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAAATAAGTATCAGCATGCTGTaGAATACTGCTTGTATAACC +
Preference number: 4 (lower is better)
Translates to: HTCRLPLTLKAKHTAIKISISML*NTACIT
Trigger: GGTTATACAAGCAGTATTGCACAGCATGCTGATACT...TATTTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR GCA 90 bp ACTAACTATCTGGTCACCCTCAGATGTTGTATCTTAGGATGGTCACTGCTGCTGTCGTTAGAGTCTTACTaGCCAAAGTTTGTATTGGAA +
Preference number: 4 (lower is better)
Translates to: TNYLVTLRCCILGWSLLLSLESY*PKFVLE
Trigger: TTCCAATACAAACTTTGGGCAGTAAGACTCTAACGA...CAGCAGCAGTGACCATCCTAAGATACAACATCTGAGGGTGACCAGATAGTTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CCA 90 bp ATAAAGTCAGGGGAGCCTTCAGAATTTAAGACATCAGGGCTCCTGTCAGGAATAATGCTGGAAGGTTCATaGTATACAGATGGTTTGGAT +
Preference number: 4 (lower is better)
Translates to: IKSGEPSEFKTSGLLSGIMLEGS*YTDGLD
Trigger: ATCCAAACCATCTGTATACCATGAACCTTCCAGCAT...TATTCCTGACAGGAGCCCTGATGTCTTAAATTCTGAAGGCTCCCCTGACTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CCA 90 bp ATTCTGTATTTCCATGTCTTTTCCACCTATGACCCCTTATTGACATGCTGGTTACCATGGACCCAATGCTaGAAGGTTCATGGTATACAG +
Preference number: 4 (lower is better)
Translates to: ILYFHVFSTYDPLLTCWLPWTQC*KVHGIQ
Trigger: CTGTATACCATGAACCTTCCAGCATTGGGTCCATGG...TAACCAGCATGTCAATAAGGGGTCATAGGTGGAAAAGACATGGAAATACAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp TTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTAGGCTTAGGTCCCTTATTGACATGCTaGTTACTGCATTTCTTGATA +
Preference number: 4 (lower is better)
Translates to: LLNTVAAVLAKPWLLGLGPLLTC*LLHFLI
Trigger: TATCAAGAAATGCAGTAACCAGCATGTCAATAAGGG...ACCTAAGCCTAGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp GGGCTCCTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAAGAAGCAGTTCTTTCCTATACTTaGCTTGTTACTACAATTGTG +
Preference number: 4 (lower is better)
Translates to: GLLSGIRMKDPGYFHKEAVLSYT*LVTTIV
Trigger: CACAATTGTAGTAACAAGCCAAGTATAGGAAAGAAC...TGCTTCTTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAGGAGCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CCA 90 bp TTTCCAAAGTCCAGCAGTAGGGTAAATCAGCTTTACAGCCTATTATACCTTAATCCTCCTGACCGTCTGTaGTTCTTTCCTATACTTGGC +
Preference number: 4 (lower is better)
Translates to: FPKSSSRVNQLYSLLYLNPPDRL*FFPILG
Trigger: GCCAAGTATAGGAAAGAACCACAGACGGTCAGGAGG...ATTAAGGTATAATAGGCTGTAAAGCTGATTTACCCTACTGCTGGACTTTGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CCA 90 bp TTAACAGTAACTCTCTTCTTGGGCCTTTTACCCAGATTTGGCAAATTCCATAATCCTCCTGACCGTCTGTaGTTCTTTCCTATACTTGGC +
Preference number: 4 (lower is better)
Translates to: LTVTLFLGLLPRFGKFHNPPDRL*FFPILG
Trigger: GCCAAGTATAGGAAAGAACCACAGACGGTCAGGAGG...ATTATGGAATTTGCCAAATCTGGGTAAAAGGCCCAAGAAGAGAGTTACTGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CCA 90 bp AATAAAATCCCTCGTCAACTTCAGATATCTCCATCAGTTCTTCTTGACCTGTTACCTCCTGACCGTCTGTaGTTCTTTCCTATACTTGGC +
Preference number: 4 (lower is better)
Translates to: NKIPRQLQISPSVLLDLLPPDRL*FFPILG
Trigger: GCCAAGTATAGGAAAGAACCACAGACGGTCAGGAGG...TAACAGGTCAAGAAGAACTGATGGAGATATCTGAAGTTGACGAGGGATTTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp CTGACTTGTTCAAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCAGGCTTAGGTAGGGATTaGCTGGTTGTTAAAGTAAGT +
Preference number: 4 (lower is better)
Translates to: LTCSKDLLNTVAAVLAKPGLGRD*LVVKVS
Trigger: ACTTACTTTAACAACCAGCCAATCCCTACCTAAGCC...TGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTTGAACAAGTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp ATCTCTCAGCTCTGTCAGCTAACATTTCCCCAAACTTATTCTACAATGTTTCCTGTCTTAGCCAAACCATaGCTACTAGGCTTAGGTAGG +
Preference number: 4 (lower is better)
Translates to: ISQLCQLTFPQTYSTMFPVLAKP*LLGLGR
Trigger: CCTACCTAAGCCTAGTAGCCATGGTTTGGCTAAGAC...AGGAAACATTGTAGAATAAGTTTGGGGAAATGTTAGCTGACAGAGCTGAGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp TTAACAGTAACTCTCTTCTTGGGCCTTTTACCCAGATTTGGCAAATTCCATAATCAAATAATCCGCCACTaGTGCATGGCCCATAGAGCT +
Preference number: 4 (lower is better)
Translates to: LTVTLFLGLLPRFGKFHNQIIRH*CMAHRA
Trigger: AGCTCTATGGGCCATGCACCAGTGGCGGATTATTTG...ATTATGGAATTTGCCAAATCTGGGTAAAAGGCCCAAGAAGAGAGTTACTGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CCA 90 bp ATTTCCATAGTGGTATACAAAGGACTCCAGGGTGCTTTCCTGTGGCTTCAGGAAGACCCCAATTTTGTGTaGAATCCTTCTCATGATAAA +
Preference number: 4 (lower is better)
Translates to: ISIVVYKGLQGAFLWLQEDPNFV*NPSHDK
Trigger: TTTATCATGAGAAGGATTCCACACAAAATTGGGGTC...TTCCTGAAGCCACAGGAAAGCACCCTGGAGTCCTTTGTATACCACTATGGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp GGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTAGGCTTGACCCCAATTTTGTGTaGAATCCTTCTCATGATAAA +
Preference number: 4 (lower is better)
Translates to: GFTKYSRCGLSQTMATRLDPNFV*NPSHDK
Trigger: TTTATCATGAGAAGGATTCCACACAAAATTGGGGTC...AAGCCTAGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440481.6
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp TGTTCAAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTAAGATCCTCTGAAATATaGGGTGCAAGACCCCAATTT +
Preference number: 4 (lower is better)
Translates to: CSKDLLNTVAAVLAKPWLRSSEI*GARPQF
Trigger: AAATTGGGGTCTTGCACCCCATATTTCAGAGGATCT...TAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTTGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440481.6
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp GCAACCAGCAATGGCTCTGGATATAATTCTAGCTGGGCTCTGTATATAATATCAAATACTCCAGGCCGTTaGGTTTTCAAATGTGAGAGG +
Preference number: 4 (lower is better)
Translates to: ATSNGSGYNSSWALYIISNTPGR*VFKCER
Trigger: CCTCTCACATTTGAAAACCCAACGGCCTGGAGTATT...TGATATTATATACAGAGCCCAGCTAGAATTATATCCAGAGCCATTGCTGGTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp ACTCGGTTTAAACTGGTAGCCAAAGCAGTTGCAGTTAAAACTATGTCCAGAGTAAGCTATGTGGACTACTaGAGTTACTGGAAGAGTGCA +
Preference number: 4 (lower is better)
Translates to: TRFKLVAKAVAVKTMSRVSYVDY*SYWKSA
Trigger: TGCACTCTTCCAGTAACTCCAGTAGTCCACATAGCT...TACTCTGGACATAGTTTTAACTGCAACTGCTTTGGCTACCAGTTTAAACCGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CCA 90 bp CAAGAATTCAGCAAATACTCAAGAGGAAAACAAGGAAAGTGCCAGGCTCACTTCAGATACATCAATTGTTaGAGCTCCAGTGGTACGATC +
Preference number: 4 (lower is better)
Translates to: QEFSKYSRGKQGKCQAHFRYINC*SSSGTI
Trigger: GATCGTACCACTGGAGCTCCAACAATTGATGTATCT...GAAGTGAGCCTGGCACTTTCCTTGTTTTCCTCTTGAGTATTTGCTGAATTCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CCA 90 bp CATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAAATATTATCAGTTAGGGAATaGTGGGAACATTCCGGTAAT +
Preference number: 4 (lower is better)
Translates to: HTCRLPLTLKAKHTAIKILSVRE*WEHSGN
Trigger: ATTACCGGAATGTTCCCACCATTCCCTAACTGATAA...TATTTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CCA 90 bp GAATTCCTGGAGTTGTGCCTCTGCCCCATTCTCTATAAAACAGTTCCCATACATGAATCACACAGGCTGTaGTTAATTACTTCAGTACTG +
Preference number: 4 (lower is better)
Translates to: EFLELCLCPILYKTVPIHESHRL*LITSVL
Trigger: CAGTACTGAAGTAATTAACCACAGCCTGTGTGATTC...ATGTATGGGAACTGTTTTATAGAGAATGGGGCAGAGGCACAACTCCAGGAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR CAA 72 bp AAGTCTCTTCAAAGAGAGAAGCTCAAGATTCTCACTTaGGGCTCTCTGAGTTTGTTTTCGAGCAAAGTGATC +
Preference number: 4 (lower is better)
Translates to: KSLQREKLKILT*GSLSLFSSKVI
Trigger: GATCACTTTGCTCGAAAACAAACTCAGAGAGCCCAAAGTGAGAATCTTGAGCTTCTCTCTTTGAAGAGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp AAGAGAGAAGCTCAAGATTCTCACTTTGGGCTCTCTGAGTTTGTTTTCGAGCAACACAACCCCTTTCTCTaGAGTAAACATTTTTCCACA +
Preference number: 4 (lower is better)
Translates to: KREAQDSHFGLSEFVFEQHNPFL*SKHFST
Trigger: TGTGGAAAAATGTTTACTTCAGAGAAAGGGGTTGTG...TTGCTCGAAAACAAACTCAGAGAGCCCAAAGTGAGAATCTTGAGCTTCTCTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp GTCTCTTCAAAGAGAGAAGCTCAAGATTCTCACTTTGGGCTCTCTGAGTTTGTTCACAACCCCTTTCTCTaGAGTAAACATTTTTCCACA +
Preference number: 4 (lower is better)
Translates to: VSSKREAQDSHFGLSEFVHNPFL*SKHFST
Trigger: TGTGGAAAAATGTTTACTTCAGAGAAAGGGGTTGTG...AACAAACTCAGAGAGCCCAAAGTGAGAATCTTGAGCTTCTCTCTTTGAAGAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp AAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTAGGTTAACATTTGCACCATaGATCCTGAAGAAACTGGTA +
Preference number: 4 (lower is better)
Translates to: KGFTKYSRCGLSQTMATRLTFAP*ILKKLV
Trigger: TACCAGTTTCTTCAGGATTCATGGTGCAAATGTTAA...CCTAGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp GAATTCCTGGAGTTGTGCCTCTGCCCCATTCTCTATAAAACAGTTCCCATACATTTAACATTTGCACCATaGATCCTGAAGAAACTGGTA +
Preference number: 4 (lower is better)
Translates to: EFLELCLCPILYKTVPIHLTFAP*ILKKLV
Trigger: TACCAGTTTCTTCAGGATTCATGGTGCAAATGTTAA...ATGTATGGGAACTGTTTTATAGAGAATGGGGCAGAGGCACAACTCCAGGAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR TCA 90 bp TCTTCAAAGAGAGAAGCTCAAGATTCTCACTTTGGGCTCTCTGAGTTTGTTTTCGAGAGGAAGTTGGTGTaGTTTCAACTTGAATACACC +
Preference number: 4 (lower is better)
Translates to: SSKREAQDSHFGLSEFVFERKLV*FQLEYT
Trigger: GGTGTATTCAAGTTGAAATCACACCAACTTCCTCTC...GAAAACAAACTCAGAGAGCCCAAAGTGAGAATCTTGAGCTTCTCTCTTTGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp AAATGTTTCAGAGATAACAACAGAAATGCCTCTAGCCATCCCCTGGAATCATATCCTATGACCCCTTATTaGCATGCTGGTTACTGCATT +
Preference number: 4 (lower is better)
Translates to: KCFRDNNRNASSHPLESYPMTPY*HAGYCI
Trigger: AATGCAGTAACCAGCATGTCAATAAGGGGTCATAGG...ATATGATTCCAGGGGATGGCTAGAGGCATTTCTGTTGTTATCTCTGAAACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR TCA 90 bp ATTCTGTATTTCCATGTCTTTTCCACCTATGACCCCTTATTGACATGCTGGTTATGTCTTTTCCACCTATaGCCCCTTATTGACATGCTG +
Preference number: 4 (lower is better)
Translates to: ILYFHVFSTYDPLLTCWLCLFHL*PLIDML
Trigger: CAGCATGTCAATAAGGGGTCATAGGTGGAAAAGACA...TAACCAGCATGTCAATAAGGGGTCATAGGTGGAAAAGACATGGAAATACAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp ATCTCTCAGCTCTGTCAGCTAACATTTCCCCAAACTTATTCTACAATGTTTCCTTGTCTTTTCCACCTATaGCCCCTTATTGACATGCTG +
Preference number: 4 (lower is better)
Translates to: ISQLCQLTFPQTYSTMFPCLFHL*PLIDML
Trigger: CAGCATGTCAATAAGGGGTCATAGGTGGAAAAGACA...AGGAAACATTGTAGAATAAGTTTGGGGAAATGTTAGCTGACAGAGCTGAGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp GCAAGATTTACACTGATTTCCAGGAAGTCTTCCAATGACGTATGCTCTGAATTAACACCCTGTATATGCTaGGCATCAATCTCTCCTAGT +
Preference number: 4 (lower is better)
Translates to: ARFTLISRKSSNDVCSELTPCIC*ASISPS
Trigger: ACTAGGAGAGATTGATGCTCAGCATATACAGGGTGT...TAATTCAGAGCATACGTCATTGGAAGACTTCCTGGAAATCAGTGTAAATCTTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409923.5
ENST00000440481.6
CDS-3UTR TCA 90 bp ACTTTCATAAAGAAGCAAAGTTGTATTTCCAGGTTCACTAGGTTATGGGAGAAAAGTTTTGCTTCCTCCTaGCCGTCTGTGGTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: TFIKKQSCISRFTRLWEKSFASS*PSVVLS
Trigger: GGAAAGAACCACAGACGGTCAGGAGGAAGCAAAACT...TTTCTCCCATAACCTAGTGAACCTGGAAATACAACTTTGCTTCTTTATGAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR TCA 90 bp GTGAGACCACTGGGAATTCTACATATTAGACGAGTAATTTGTTTGCACTCTGATTCACTTTGGGCTCTCTaGGTTTGTTTTCGAGCAAAG +
Preference number: 4 (lower is better)
Translates to: VRPLGILHIRRVICLHSDSLWAL*VCFRAK
Trigger: CTTTGCTCGAAAACAAACTCAGAGAGCCCAAAGTGA...ATCAGAGTGCAAACAAATTACTCGTCTAATATGTAGAATTCCCAGTGGTCTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp AATAAAATCCCTCGTCAACTTCAGATATCTCCATCAGTTCTTCTTGACCTGTTATGTCAGGAATACGGATaGAAGACCCAGGGTACTTTC +
Preference number: 4 (lower is better)
Translates to: NKIPRQLQISPSVLLDLLCQEYG*KTQGTF
Trigger: GAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACA...TAACAGGTCAAGAAGAACTGATGGAGATATCTGAAGTTGACGAGGGATTTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp ATGTGGGACTGTGACACCACTGACTTGTTCAAAGGATTTACTAAATACAGTCGCCCTTACAACCTCACATaGGACATAACCAACTTGATT +
Preference number: 4 (lower is better)
Translates to: MWDCDTTDLFKGFTKYSRPYNLT*DITNLI
Trigger: AATCAAGTTGGTTATGTCTCATGTGAGGTTGTAAGG...GCGACTGTATTTAGTAAATCCTTTGAACAAGTCAGTGGTGTCACAGTCCCACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp CTGTATTTCCATGTCTTTTCCACCTATGACCCCTTATTGACATGCTGGTTACTGCCTTACAACCTCACATaGGACATAACCAACTTGATT +
Preference number: 4 (lower is better)
Translates to: LYFHVFSTYDPLLTCWLLPYNLT*DITNLI
Trigger: AATCAAGTTGGTTATGTCTCATGTGAGGTTGTAAGG...CAGTAACCAGCATGTCAATAAGGGGTCATAGGTGGAAAAGACATGGAAATACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp GATGACGGGTTATGTGGGACTGTGACACCACTGACTTGTTCAAAGGATTTACTATATACAGTGGTATCTTaGGAGCTATGTTGCAAGATT +
Preference number: 4 (lower is better)
Translates to: DDGLCGTVTPLTCSKDLLYTVVS*ELCCKI
Trigger: AATCTTGCAACATAGCTCTCAAGATACCACTGTATA...TAGTAAATCCTTTGAACAAGTCAGTGGTGTCACAGTCCCACATAACCCGTCATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp GTTAACGTAACTCCGCTCTCCAGAAAATCAATTAGTGCAAATCATTTGAAGCAACCTGTGCTTCTGATATaGCAAATAATCCGCCACTGG +
Preference number: 4 (lower is better)
Translates to: VNVTPLSRKSISANHLKQPVLLI*QIIRHW
Trigger: CCAGTGGCGGATTATTTGTCATATCAGAAGCACAGG...TTGCTTCAAATGATTTGCACTAATTGATTTTCTGGAGAGCGGAGTTACGTTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR TCA 90 bp CTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAAGAAGCAAAGTTGCGAGTTCATGCTTTTTaGAGAACTCGGTTTAAACTG +
Preference number: 4 (lower is better)
Translates to: LSGIRMKDPGYFHKEAKLRVHAF*RTRFKL
Trigger: CAGTTTAAACCGAGTTCTTCAAAAAGCATGAACTCG...CAACTTTGCTTCTTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp AAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTAGGAGACCTAGAGTGGCATaGAATTCTGCATTTTTAACA +
Preference number: 4 (lower is better)
Translates to: KGFTKYSRCGLSQTMATRRPRVA*NSAFLT
Trigger: TGTTAAAAATGCAGAATTTCATGCCACTCTAGGTCT...CCTAGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000440481.6
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp GTCTCTTCAAAGAGAGAAGCTCAAGATTCTCACTTTGGGCTCTCTGAGTTTGTTTCAGAACCATTTCACTaGGCAAGTCTTCAGAGATTT +
Preference number: 4 (lower is better)
Translates to: VSSKREAQDSHFGLSEFVSEPFH*ASLQRF
Trigger: AAATCTCTGAAGACTTGCTCAGTGAAATGGTTCTGA...AACAAACTCAGAGAGCCCAAAGTGAGAATCTTGAGCTTCTCTCTTTGAAGAGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440481.6
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp CATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAAATACCCAATTTTCAAATTTaGAAGTTCAGTGGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: HTCRLPLTLKAKHTAIKIPNFQI*KFSGEK
Trigger: TTTCTCCCCACTGAACTTTCAAATTTGAAAATTGGG...TATTTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp AGGGTTCCTATTAAGTTAATACAATATCAAGTTTCACTGCCCGATTGCCTTACATCTGTTCAGATCCTCTaGAATATGGGGTGCAAGACC +
Preference number: 4 (lower is better)
Translates to: RVPIKLIQYQVSLPDCLTSVQIL*NMGCKT
Trigger: GGTCTTGCACCCCATATTTCAGAGGATCTGAACAGA...TGTAAGGCAATCGGGCAGTGAAACTTGATATTGTATTAACTTAATAGGAACCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp ATAAAGTCAGGGGAGCCTTCAGAATTTAAGACATCAGGGCTCCTGTCAGGAATACTGAAGACTTATCCTTaGTTCTTTTCCAAAGCTAAC +
Preference number: 4 (lower is better)
Translates to: IKSGEPSEFKTSGLLSGILKTYP*FFSKAN
Trigger: GTTAGCTTTGGAAAAGAATCAAGGATAAGTCTTCAG...TATTCCTGACAGGAGCCCTGATGTCTTAAATTCTGAAGGCTCCCCTGACTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR TCA 90 bp GTGAGACCACTGGGAATTCTACATATTAGACGAGTAATTTGTTTGCACTCTGATCTCCTATGCTGCCACTaGTTTCCTGGATTCGATTTA +
Preference number: 4 (lower is better)
Translates to: VRPLGILHIRRVICLHSDLLCCH*FPGFDL
Trigger: TAAATCGAATCCAGGAAATCAGTGGCAGCATAGGAG...ATCAGAGTGCAAACAAATTACTCGTCTAATATGTAGAATTCCCAGTGGTCTCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR TCA 90 bp ACTTTCATAAAGAAGCAAAGTTGTATTTCCAGGTTCACTAGGTTATGGGAGAAAGGAGGCCTGTATTGTTaGAGTTCCTGTGTAGCCCTA +
Preference number: 4 (lower is better)
Translates to: TFIKKQSCISRFTRLWEKGGLYC*SSCVAL
Trigger: TAGGGCTACACAGGAACTTCAACAATACAGGCCTCC...TTTCTCCCATAACCTAGTGAACCTGGAAATACAACTTTGCTTCTTTATGAAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR GCA 90 bp TGGTGTGATTTCAACTTGAATACACCTTGTACCTTCCTTATTAGATTTCATGGGTGCTATGCACATTTCTaGTGGCTGAGACTGCAAGGT +
Preference number: 4 (lower is better)
Translates to: WCDFNLNTPCTFLIRFHGCYAHF*WLRLQG
Trigger: ACCTTGCAGTCTCAGCCAGCAGAAATGTGCATAGCA...CCCATGAAATCTAATAAGGAAGGTACAAGGTGTATTCAAGTTGAAATCACACCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679789.1
ENST00000681079.1
ENST00000681402.1
CDS-3UTR GCA 90 bp AAATGTTTCAGAGATAACAACAGAAATGCCTCTAGCCATCCCCTGGAATCATATCTTCAATGCATCCACTaGTATGCACATTTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: KCFRDNNRNASSHPLESYLQCIH*YAHFCW
Trigger: CCAGCAGAAATGTGCATAGCAGTGGATGCATTGAAG...ATATGATTCCAGGGGATGGCTAGAGGCATTTCTGTTGTTATCTCTGAAACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR GCA 90 bp TTAATTCTGTATTTCCATGTCTTTTCCACCTATGACCCCTTATTGACATGCTGGCTTCAATGCATCCACTaGTATGCACATTTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LILYFHVFSTYDPLLTCWLQCIH*YAHFCW
Trigger: CCAGCAGAAATGTGCATAGCAGTGGATGCATTGAAG...CCAGCATGTCAATAAGGGGTCATAGGTGGAAAAGACATGGAAATACAGAATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679789.1
ENST00000681079.1
ENST00000681402.1
CDS-3UTR GCA 90 bp GGGTTATGTGGGACTGTGACACCACTGACTTGTTCAAAGGATTTACTAAATACAGAAGAAGAGCTTCAATaGATCCACTGCTATGCACAT +
Preference number: 4 (lower is better)
Translates to: GLCGTVTPLTCSKDLLNTEEELQ*IHCYAH
Trigger: ATGTGCATAGCAGTGGATGCATTGAAGCTCTTCTTC...TGTATTTAGTAAATCCTTTGAACAAGTCAGTGGTGTCACAGTCCCACATAACCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681402.1
CDS-3UTR GCA 90 bp AAATGTTTCAGAGATAACAACAGAAATGCCTCTAGCCATCCCCTGGAATCATATTTCAAACCGATTCTGTaGTGTCAGCATCTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: KCFRDNNRNASSHPLESYFKPIL*CQHLPL
Trigger: CAAAGGGAGATGCTGACAGCACAGAATCGGTTTGAA...ATATGATTCCAGGGGATGGCTAGAGGCATTTCTGTTGTTATCTCTGAAACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR GCA 90 bp ATTCTGTATTTCCATGTCTTTTCCACCTATGACCCCTTATTGACATGCTGGTTATTCAAACCGATTCTGTaGTGTCAGCATCTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: ILYFHVFSTYDPLLTCWLFKPIL*CQHLPL
Trigger: CAAAGGGAGATGCTGACAGCACAGAATCGGTTTGAA...TAACCAGCATGTCAATAAGGGGTCATAGGTGGAAAAGACATGGAAATACAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp GAATTCCTGGAGTTGTGCCTCTGCCCCATTCTCTATAAAACAGTTCCCATACATATCCCTGTTAACATTTaGACCATGAATCCTGAAGAA +
Preference number: 4 (lower is better)
Translates to: EFLELCLCPILYKTVPIHIPVNI*TMNPEE
Trigger: TTCTTCAGGATTCATGGTGCAAATGTTAACAGGGAT...ATGTATGGGAACTGTTTTATAGAGAATGGGGCAGAGGCACAACTCCAGGAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR GCA 90 bp ACTCGGTTTAAACTGGTAGCCAAAGCAGTTGCAGTTAAAACTATGTCCAGAGTAGCTAAAACTGCACTCTaGCAGGTGAGTTTATTCCAT +
Preference number: 4 (lower is better)
Translates to: TRFKLVAKAVAVKTMSRVAKTAL*QVSLFH
Trigger: ATGGAATAAACTCACCTGGCAGAGTGCAGTTTTAGC...TACTCTGGACATAGTTTTAACTGCAACTGCTTTGGCTACCAGTTTAAACCGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440481.6
CDS-3UTR GCA 90 bp ATGTGGGACTGTGACACCACTGACTTGTTCAAAGGATTTACTAAATACAGTCGCAGTGCAGTTATAAAGTaGTCTGCTAAAACTGCACTC +
Preference number: 4 (lower is better)
Translates to: MWDCDTTDLFKGFTKYSRSAVIK*SAKTAL
Trigger: GAGTGCAGTTTTAGCAGAGCACTTTATAACTGCACT...GCGACTGTATTTAGTAAATCCTTTGAACAAGTCAGTGGTGTCACAGTCCCACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409923.5
ENST00000440481.6
CDS-3UTR GCA 90 bp CTGACTTGTTCAAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGTATTTCCTTGGAGTaGAGTTATAAAGTGCTCTGC +
Preference number: 4 (lower is better)
Translates to: LTCSKDLLNTVAAVLAKPCISLE*SYKVLC
Trigger: GCAGAGCACTTTATAACTGCACTCCAAGGAAATACA...TGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTTGAACAAGTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409923.5
ENST00000440481.6
CDS-3UTR GCA 90 bp AGGGTTCCTATTAAGTTAATACAATATCAAGTTTCACTGCCCGATTGCCTTACACTTTTCCTCCAGTTTTaGTTCCTCCTGACCGTCTGT +
Preference number: 4 (lower is better)
Translates to: RVPIKLIQYQVSLPDCLTLFLQF*FLLTVC
Trigger: ACAGACGGTCAGGAGGAAGCAAAACTGGAGGAAAAG...TGTAAGGCAATCGGGCAGTGAAACTTGATATTGTATTAACTTAATAGGAACCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp GCAAGATTTACACTGATTTCCAGGAAGTCTTCCAATGACGTATGCTCTGAATTAACTAAATACAGTCGCTaGGGTCTTAGCCAAACCATG +
Preference number: 4 (lower is better)
Translates to: ARFTLISRKSSNDVCSELTKYSR*GLSQTM
Trigger: CATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGT...TAATTCAGAGCATACGTCATTGGAAGACTTCCTGGAAATCAGTGTAAATCTTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR GCA 90 bp GCAACCAGCAATGGCTCTGGATATAATTCTAGCTGGGCTCTGTATATAATATCACATATATCTGAGCTCTaGATAAGCAGGAACAAGAGG +
Preference number: 4 (lower is better)
Translates to: ATSNGSGYNSSWALYIISHISEL*ISRNKR
Trigger: CCTCTTGTTCCTGCTTATGCAGAGCTCAGATATATG...TGATATTATATACAGAGCCCAGCTAGAATTATATCCAGAGCCATTGCTGGTTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp ACTCGGTTTAAACTGGTAGCCAAAGCAGTTGCAGTTAAAACTATGTCCAGAGTATGTCCAGAGTATAAATaGTTTGGCAGCCTTCAAAGC +
Preference number: 4 (lower is better)
Translates to: TRFKLVAKAVAVKTMSRVCPEYK*FGSLQS
Trigger: GCTTTGAAGGCTGCCAAAGCATTTATACTCTGGACA...TACTCTGGACATAGTTTTAACTGCAACTGCTTTGGCTACCAGTTTAAACCGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp TCTGAGCTCTGCATAAGCAGGAACAAGAGGAAAACACTAGCATGCTCTCTTGGTATGAAAACGAGTTCATaGTTTTTGAAGAACTCGGTT +
Preference number: 4 (lower is better)
Translates to: SELCISRNKRKTLACSLGMKTSS*FLKNSV
Trigger: AACCGAGTTCTTCAAAAAGCATGAACTCGTTTTCAT...ACCAAGAGAGCATGCTAGTGTTTTCCTCTTGTTCCTGCTTATGCAGAGCTCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp ACATCAGGGCTCCTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAAATGAAAACGAGTTCATaGTTTTTGAAGAACTCGGTT +
Preference number: 4 (lower is better)
Translates to: TSGLLSGIRMKDPGYFHKMKTSS*FLKNSV
Trigger: AACCGAGTTCTTCAAAAAGCATGAACTCGTTTTCAT...TTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAGGAGCCCTGATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp ATAAAACAGTTCCCATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACTATTTGCTGAGCAGTTaGTTCACAATTGAAAAGAGC +
Preference number: 4 (lower is better)
Translates to: IKQFPYMQTPFDSEGQTHYLLSS*FTIEKS
Trigger: GCTCTTTTCAATTGTGAAGCAACTGCTCAGCAAATA...GTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATGGGAACTGTTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp TCAGGGCTCCTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAAGAATATTACAAGCAATACTaGAATGAATACCTTGCATGC +
Preference number: 4 (lower is better)
Translates to: SGLLSGIRMKDPGYFHKEYYKQY*NEYLAC
Trigger: GCATGCAAGGTATTCATTGCAGTATTGCTTGTAATA...TTCTTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAGGAGCCCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR GCA 90 bp CTCTCTCTCACTCTGAATGATGACTTAAGTACATTTGCTTTACAGGGGAACCGCAAATACAGGTTTCCATaGTTCACTCACAGTGATTCT +
Preference number: 4 (lower is better)
Translates to: LSLTLNDDLSTFALQGNRKYRFP*FTHSDS
Trigger: AGAATCACTGTGAGTGAAGCATGGAAACCTGTATTT...GCGGTTCCCCTGTAAAGCAAATGTACTTAAGTCATCATTCAGAGTGAGAGAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CCA 90 bp GGGTTATGTGGGACTGTGACACCACTGACTTGTTCAAAGGATTTACTAAATACAACTGAAGAGAAACACTaGGCATGTAAGTTAAGGCAG +
Preference number: 4 (lower is better)
Translates to: GLCGTVTPLTCSKDLLNTTEEKH*ACKLRQ
Trigger: CTGCCTTAACTTACATGCCCAGTGTTTCTCTTCAGT...TGTATTTAGTAAATCCTTTGAACAAGTCAGTGGTGTCACAGTCCCACATAACCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp AAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTAGGCTATTCGAGAGGAAGTTaGTGTGATTTCAACTTGAAT +
Preference number: 4 (lower is better)
Translates to: KDLLNTVAAVLAKPWLLGYSRGS*CDFNLN
Trigger: ATTCAAGTTGAAATCACACCAACTTCCTCTCGAATA...GCCTAGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp CATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAAATACCCTTATTGACATGCTaGTTACTGCATTTCTTGATA +
Preference number: 4 (lower is better)
Translates to: HTCRLPLTLKAKHTAIKIPLLTC*LLHFLI
Trigger: TATCAAGAAATGCAGTAACCAGCATGTCAATAAGGG...TATTTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CCA 90 bp GAATTCCTGGAGTTGTGCCTCTGCCCCATTCTCTATAAAACAGTTCCCATACATCCCTTATTGACATGCTaGTTACTGCATTTCTTGATA +
Preference number: 4 (lower is better)
Translates to: EFLELCLCPILYKTVPIHPLLTC*LLHFLI
Trigger: TATCAAGAAATGCAGTAACCAGCATGTCAATAAGGG...ATGTATGGGAACTGTTTTATAGAGAATGGGGCAGAGGCACAACTCCAGGAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CCA 90 bp ACATCAGGGCTCCTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAAAATTCTGTATTTCCTTaGAGTGCAGTTATAAAGTGC +
Preference number: 4 (lower is better)
Translates to: TSGLLSGIRMKDPGYFHKNSVFP*SAVIKC
Trigger: GCACTTTATAACTGCACTCCAAGGAAATACAGAATT...TTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAGGAGCCCTGATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409923.5
ENST00000440481.6
CDS-3UTR CCA 90 bp ATTTCCATAGTGGTATACAAAGGACTCCAGGGTGCTTTCCTGTGGCTTCAGGAAGTTCTTTCCTATACTTaGCTTGTTACTACAATTGTG +
Preference number: 4 (lower is better)
Translates to: ISIVVYKGLQGAFLWLQEVLSYT*LVTTIV
Trigger: CACAATTGTAGTAACAAGCCAAGTATAGGAAAGAAC...TTCCTGAAGCCACAGGAAAGCACCCTGGAGTCCTTTGTATACCACTATGGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp ACATCAGGGCTCCTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAAGTTCTTTCCTATACTTaGCTTGTTACTACAATTGTG +
Preference number: 4 (lower is better)
Translates to: TSGLLSGIRMKDPGYFHKVLSYT*LVTTIV
Trigger: CACAATTGTAGTAACAAGCCAAGTATAGGAAAGAAC...TTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAGGAGCCCTGATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CCA 90 bp TCTTCAAAGAGAGAAGCTCAAGATTCTCACTTTGGGCTCTCTGAGTTTGTTTTCGGCTTAGGTAGGGATTaGCTGGTTGTTAAAGTAAGT +
Preference number: 4 (lower is better)
Translates to: SSKREAQDSHFGLSEFVFGLGRD*LVVKVS
Trigger: ACTTACTTTAACAACCAGCCAATCCCTACCTAAGCC...GAAAACAAACTCAGAGAGCCCAAAGTGAGAATCTTGAGCTTCTCTCTTTGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp CATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAAATAATAAGCTTTTCTTCTTaGAGACTACAAGCGGAAAAC +
Preference number: 4 (lower is better)
Translates to: HTCRLPLTLKAKHTAIKIISFSS*RLQAEN
Trigger: GTTTTCCGCTTGTAGTCTCCAAGAAGAAAAGCTTAT...TATTTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CCA 90 bp AGGGTTCCTATTAAGTTAATACAATATCAAGTTTCACTGCCCGATTGCCTTACATGCCTGTTTTCAGATTaGCTTCCTGACCAGGAGCTA +
Preference number: 4 (lower is better)
Translates to: RVPIKLIQYQVSLPDCLTCLFSD*LPDQEL
Trigger: TAGCTCCTGGTCAGGAAGCCAATCTGAAAACAGGCA...TGTAAGGCAATCGGGCAGTGAAACTTGATATTGTATTAACTTAATAGGAACCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp AATAAAATCCCTCGTCAACTTCAGATATCTCCATCAGTTCTTCTTGACCTGTTATGCCTGTTTTCAGATTaGCTTCCTGACCAGGAGCTA +
Preference number: 4 (lower is better)
Translates to: NKIPRQLQISPSVLLDLLCLFSD*LPDQEL
Trigger: TAGCTCCTGGTCAGGAAGCCAATCTGAAAACAGGCA...TAACAGGTCAAGAAGAACTGATGGAGATATCTGAAGTTGACGAGGGATTTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp GCAAGATTTACACTGATTTCCAGGAAGTCTTCCAATGACGTATGCTCTGAATTAAATACTCCAGGCCGTTaGGTTTTCAAATGTGAGAGG +
Preference number: 4 (lower is better)
Translates to: ARFTLISRKSSNDVCSELNTPGR*VFKCER
Trigger: CCTCTCACATTTGAAAACCCAACGGCCTGGAGTATT...TAATTCAGAGCATACGTCATTGGAAGACTTCCTGGAAATCAGTGTAAATCTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp GAATTCCTGGAGTTGTGCCTCTGCCCCATTCTCTATAAAACAGTTCCCATACATGACTACTGGAGTTACTaGAAGAGTGCATATTGTATA +
Preference number: 4 (lower is better)
Translates to: EFLELCLCPILYKTVPIHDYWSY*KSAYCI
Trigger: TATACAATATGCACTCTTCCAGTAACTCCAGTAGTC...ATGTATGGGAACTGTTTTATAGAGAATGGGGCAGAGGCACAACTCCAGGAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CCA 90 bp CAAGAATTCAGCAAATACTCAAGAGGAAAACAAGGAAAGTGCCAGGCTCACTTCTTGTACGAGTATTCATaGGTTTGCTTGCTTGTTTGG +
Preference number: 4 (lower is better)
Translates to: QEFSKYSRGKQGKCQAHFLYEYS*VCLLVW
Trigger: CCAAACAAGCAAGCAAACCCATGAATACTCGTACAA...GAAGTGAGCCTGGCACTTTCCTTGTTTTCCTCTTGAGTATTTGCTGAATTCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CCA 90 bp AATGATGACTTAAGTACATTTGCTTTACAGGGGAACCGCAACCATAGCCAAAAGCTGGCCAGGTATAAATaGTGTAGATCTGTATCTTGG +
Preference number: 4 (lower is better)
Translates to: NDDLSTFALQGNRNHSQKLARYK*CRSVSW
Trigger: CCAAGATACAGATCTACACCATTTATACCTGGCCAG...CTTTTGGCTATGGTTGCGGTTCCCCTGTAAAGCAAATGTACTTAAGTCATCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CCA 90 bp TCAGGGCTCCTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAAGAATGTTTGAACAAAGGCTaGAATACCAAAGAGATTTAC +
Preference number: 4 (lower is better)
Translates to: SGLLSGIRMKDPGYFHKECLNKG*NTKEIY
Trigger: GTAAATCTCTTTGGTATTCCAGCCTTTGTTCAAACA...TTCTTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAGGAGCCCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CCA 90 bp CACCTCCACAGAGGATTTGTTTATTACCAAGCACTTAGGGGATCATTTTTAATCCTGCCACTAACTATCTaGTCACCCTCAGATGTTGTA +
Preference number: 4 (lower is better)
Translates to: HLHRGFVYYQALRGSFLILPLTI*SPSDVV
Trigger: TACAACATCTGAGGGTGACCAGATAGTTAGTGGCAG...GATTAAAAATGATCCCCTAAGTGCTTGGTAATAAACAAATCCTCTGTGGAGGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CCA 90 bp TTAACAGTAACTCTCTTCTTGGGCCTTTTACCCAGATTTGGCAAATTCCATAATGTCCTCCTAATATCCTaGAGCAGTAAGAAGCACTGC +
Preference number: 4 (lower is better)
Translates to: LTVTLFLGLLPRFGKFHNVLLIS*SSKKHC
Trigger: GCAGTGCTTCTTACTGCTCCAGGATATTAGGAGGAC...ATTATGGAATTTGCCAAATCTGGGTAAAAGGCCCAAGAAGAGAGTTACTGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CCA 90 bp TCTGAGCTCTGCATAAGCAGGAACAAGAGGAAAACACTAGCATGCTCTCTTGGTCTGAAAGTTCTTCAATaGCTTCAAACAGAGGTTTTA +
Preference number: 4 (lower is better)
Translates to: SELCISRNKRKTLACSLGLKVLQ*LQTEVL
Trigger: TAAAACCTCTGTTTGAAGCCATTGAAGAACTTTCAG...ACCAAGAGAGCATGCTAGTGTTTTCCTCTTGTTCCTGCTTATGCAGAGCTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CCA 90 bp CCTTCAGAATTTAAGACATCAGGGCTCCTGTCAGGAATACGGATGAAAGACCCACAAATGTGGACTATTTaGAAACCTTTCACAATTCTC +
Preference number: 4 (lower is better)
Translates to: PSEFKTSGLLSGIRMKDPQMWTI*KPFTIL
Trigger: GAGAATTGTGAAAGGTTTCCAAATAGTCCACATTTG...TGGGTCTTTCATCCGTATTCCTGACAGGAGCCCTGATGTCTTAAATTCTGAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679826.1
CDS-3UTR TCA 90 bp GTGAGACCACTGGGAATTCTACATATTAGACGAGTAATTTGTTTGCACTCTGATACAAATTTGACACAGTaGCTGAAGAGAAACACTGGG +
Preference number: 4 (lower is better)
Translates to: VRPLGILHIRRVICLHSDTNLTQ*LKRNTG
Trigger: CCCAGTGTTTCTCTTCAGTCACTGTGTCAAATTTGT...ATCAGAGTGCAAACAAATTACTCGTCTAATATGTAGAATTCCCAGTGGTCTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp ATCTCTCAGCTCTGTCAGCTAACATTTCCCCAAACTTATTCTACAATGTTTCCTGGTGTGATTTCAACTTaGATACACCTTGTACCTTCC +
Preference number: 4 (lower is better)
Translates to: ISQLCQLTFPQTYSTMFPGVIST*IHLVPS
Trigger: GGAAGGTACAAGGTGTATTCAAGTTGAAATCACACC...AGGAAACATTGTAGAATAAGTTTGGGGAAATGTTAGCTGACAGAGCTGAGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp GCAAGATTTACACTGATTTCCAGGAAGTCTTCCAATGACGTATGCTCTGAATTAGAGAGGAAGTTGGTGTaGTTTCAACTTGAATACACC +
Preference number: 4 (lower is better)
Translates to: ARFTLISRKSSNDVCSELERKLV*FQLEYT
Trigger: GGTGTATTCAAGTTGAAATCACACCAACTTCCTCTC...TAATTCAGAGCATACGTCATTGGAAGACTTCCTGGAAATCAGTGTAAATCTTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR TCA 90 bp TCGGTGCAAAGCAGACTAGAAATACTGCTCATATTTATTCTCGCTGGAAAAAGTGGTTACTGCATTTCTTaGTATTCGAGAGGAAGTTGG +
Preference number: 4 (lower is better)
Translates to: SVQSRLEILLIFILAGKSGYCIS*YSRGSW
Trigger: CCAACTTCCTCTCGAATATCAAGAAATGCAGTAACC...ACTTTTTCCAGCGAGAATAAATATGAGCAGTATTTCTAGTCTGCTTTGCACCGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR TCA 90 bp GTTAACGTAACTCCGCTCTCCAGAAAATCAATTAGTGCAAATCATTTGAAGCAATGTCTTTTCCACCTATaGCCCCTTATTGACATGCTG +
Preference number: 4 (lower is better)
Translates to: VNVTPLSRKSISANHLKQCLFHL*PLIDML
Trigger: CAGCATGTCAATAAGGGGTCATAGGTGGAAAAGACA...TTGCTTCAAATGATTTGCACTAATTGATTTTCTGGAGAGCGGAGTTACGTTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp GCAAGATTTACACTGATTTCCAGGAAGTCTTCCAATGACGTATGCTCTGAATTATGTTTTCGAGCAAAGTaGTCTTTGCAAGATTCCCCT +
Preference number: 4 (lower is better)
Translates to: ARFTLISRKSSNDVCSELCFRAK*SLQDSP
Trigger: AGGGGAATCTTGCAAAGATCACTTTGCTCGAAAACA...TAATTCAGAGCATACGTCATTGGAAGACTTCCTGGAAATCAGTGTAAATCTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR TCA 90 bp ACCACTGACTTGTTCAAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAACATTTTCCAGGGCTTTaGGCAAATTGTTCTAATCAT +
Preference number: 4 (lower is better)
Translates to: TTDLFKGFTKYSRCGLSQHFPGL*ANCSNH
Trigger: ATGATTAGAACAATTTGCTCAAAGCCCTGGAAAATG...TTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTTGAACAAGTCAGTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp GTCTCTTCAAAGAGAGAAGCTCAAGATTCTCACTTTGGGCTCTCTGAGTTTGTTCATTTTCCAGGGCTTTaGGCAAATTGTTCTAATCAT +
Preference number: 4 (lower is better)
Translates to: VSSKREAQDSHFGLSEFVHFPGL*ANCSNH
Trigger: ATGATTAGAACAATTTGCTCAAAGCCCTGGAAAATG...AACAAACTCAGAGAGCCCAAAGTGAGAATCTTGAGCTTCTCTCTTTGAAGAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp TCAAAGAGAGAAGCTCAAGATTCTCACTTTGGGCTCTCTGAGTTTGTTTTCGAGCATTTTCCAGGGCTTTaGGCAAATTGTTCTAATCAT +
Preference number: 4 (lower is better)
Translates to: SKREAQDSHFGLSEFVFEHFPGL*ANCSNH
Trigger: ATGATTAGAACAATTTGCTCAAAGCCCTGGAAAATG...CTCGAAAACAAACTCAGAGAGCCCAAAGTGAGAATCTTGAGCTTCTCTCTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp CTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAAGAAGCAAAGTTGTATACAGTGGTATCTTaGGAGCTATGTTGCAAGATT +
Preference number: 4 (lower is better)
Translates to: LSGIRMKDPGYFHKEAKLYTVVS*ELCCKI
Trigger: AATCTTGCAACATAGCTCTCAAGATACCACTGTATA...CAACTTTGCTTCTTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp GATCTCTCAGCTCTGTCAGCTAACATTTCCCCAAACTTATTCTACAATGTTTCCCGAGTTCATGCTTTTTaGAGAACTCGGTTTAAACTG +
Preference number: 4 (lower is better)
Translates to: DLSALSANISPNLFYNVSRVHAF*RTRFKL
Trigger: CAGTTTAAACCGAGTTCTTCAAAAAGCATGAACTCG...GGAAACATTGTAGAATAAGTTTGGGGAAATGTTAGCTGACAGAGCTGAGAGATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp ACTCGGTTTAAACTGGTAGCCAAAGCAGTTGCAGTTAAAACTATGTCCAGAGTACGAGTTCATGCTTTTTaGAGAACTCGGTTTAAACTG +
Preference number: 4 (lower is better)
Translates to: TRFKLVAKAVAVKTMSRVRVHAF*RTRFKL
Trigger: CAGTTTAAACCGAGTTCTTCAAAAAGCATGAACTCG...TACTCTGGACATAGTTTTAACTGCAACTGCTTTGGCTACCAGTTTAAACCGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp CTGACTTGTTCAAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCAAGACCTAGAGTGGCATaGAATTCTGCATTTTTAACA +
Preference number: 4 (lower is better)
Translates to: LTCSKDLLNTVAAVLAKPRPRVA*NSAFLT
Trigger: TGTTAAAAATGCAGAATTTCATGCCACTCTAGGTCT...TGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTTGAACAAGTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000440481.6
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp CTGACTTGTTCAAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCACCCAATTTTCAAATTTaGAAGTTCAGTGGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: LTCSKDLLNTVAAVLAKPPNFQI*KFSGEK
Trigger: TTTCTCCCCACTGAACTTTCAAATTTGAAAATTGGG...TGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTTGAACAAGTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440481.6
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp CTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAAGAAGCAAAGTTGATGAGTAATATTTGCTaGGCAGTTGCTTCACAATTG +
Preference number: 4 (lower is better)
Translates to: LSGIRMKDPGYFHKEAKLMSNIC*AVASQL
Trigger: CAATTGTGAAGCAACTGCTCAGCAAATATTACTCAT...CAACTTTGCTTCTTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp ATGTGGGACTGTGACACCACTGACTTGTTCAAAGGATTTACTAAATACAGTCGCATGAGTAATATTTGCTaGGCAGTTGCTTCACAATTG +
Preference number: 4 (lower is better)
Translates to: MWDCDTTDLFKGFTKYSRMSNIC*AVASQL
Trigger: CAATTGTGAAGCAACTGCTCAGCAAATATTACTCAT...GCGACTGTATTTAGTAAATCCTTTGAACAAGTCAGTGGTGTCACAGTCCCACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440481.6
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp CCTGGAATAAAATCCCTCGTCAACTTCAGATATCTCCATCAGTTCTTCTTGACCATGAGTAATATTTGCTaGGCAGTTGCTTCACAATTG +
Preference number: 4 (lower is better)
Translates to: PGIKSLVNFRYLHQFFLTMSNIC*AVASQL
Trigger: CAATTGTGAAGCAACTGCTCAGCAAATATTACTCAT...GGTCAAGAAGAACTGATGGAGATATCTGAAGTTGACGAGGGATTTTATTCCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440481.6
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp CACCTCCACAGAGGATTTGTTTATTACCAAGCACTTAGGGGATCATTTTTAATCAGAGTCCTGTTTAGCTaGAAGTTCTTCAATGGCTTC +
Preference number: 4 (lower is better)
Translates to: HLHRGFVYYQALRGSFLIRVLFS*KFFNGF
Trigger: GAAGCCATTGAAGAACTTTCAGCTAAACAGGACTCT...GATTAAAAATGATCCCCTAAGTGCTTGGTAATAAACAAATCCTCTGTGGAGGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR GCA 90 bp GTTAACGTAACTCCGCTCTCCAGAAAATCAATTAGTGCAAATCATTTGAAGCAAACTGCTCCTCTCCACTaGGATAGAATTCAAAGAGCT +
Preference number: 4 (lower is better)
Translates to: VNVTPLSRKSISANHLKQTAPLH*DRIQRA
Trigger: AGCTCTTTGAATTCTATCGCAGTGGAGAGGAGCAGT...TTGCTTCAAATGATTTGCACTAATTGATTTTCTGGAGAGCGGAGTTACGTTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
CDS-3UTR GCA 90 bp TTGCTTTTTCAAAACAAACTTCAGGCATCATTTAAATGCCGAGAATTCCAACTCATGCATCCACTGCTATaGACATTTCTGCTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: LLFQNKLQASFKCREFQLMHPLL*TFLLAE
Trigger: CTCAGCCAGCAGAAATGTGCATAGCAGTGGATGCAT...GAGTTGGAATTCTCGGCATTTAAATGATGCCTGAAGTTTGTTTTGAAAAAGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681402.1
CDS-3UTR GCA 90 bp TTTCCAAAGTCCAGCAGTAGGGTAAATCAGCTTTACAGCCTATTATACCTTAATCTTCAATGCATCCACTaGTATGCACATTTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: FPKSSSRVNQLYSLLYLNLQCIH*YAHFCW
Trigger: CCAGCAGAAATGTGCATAGCAGTGGATGCATTGAAG...ATTAAGGTATAATAGGCTGTAAAGCTGATTTACCCTACTGCTGGACTTTGGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR GCA 90 bp AAATGTTTCAGAGATAACAACAGAAATGCCTCTAGCCATCCCCTGGAATCATATGAAGAAGAGCTTCAATaGATCCACTGCTATGCACAT +
Preference number: 4 (lower is better)
Translates to: KCFRDNNRNASSHPLESYEEELQ*IHCYAH
Trigger: ATGTGCATAGCAGTGGATGCATTGAAGCTCTTCTTC...ATATGATTCCAGGGGATGGCTAGAGGCATTTCTGTTGTTATCTCTGAAACATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR GCA 90 bp ACTTTCATAAAGAAGCAAAGTTGTATTTCCAGGTTCACTAGGTTATGGGAGAAAGAGCCATGGACCCAATaGTGGAAGGTTCATGGTATA +
Preference number: 4 (lower is better)
Translates to: TFIKKQSCISRFTRLWEKEPWTQ*WKVHGI
Trigger: TATACCATGAACCTTCCAGCATTGGGTCCATGGCTC...TTTCTCCCATAACCTAGTGAACCTGGAAATACAACTTTGCTTCTTTATGAAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR GCA 90 bp AATAAAATCCCTCGTCAACTTCAGATATCTCCATCAGTTCTTCTTGACCTGTTATTCAAACCGATTCTGTaGTGTCAGCATCTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: NKIPRQLQISPSVLLDLLFKPIL*CQHLPL
Trigger: CAAAGGGAGATGCTGACAGCACAGAATCGGTTTGAA...TAACAGGTCAAGAAGAACTGATGGAGATATCTGAAGTTGACGAGGGATTTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp CACCTCCACAGAGGATTTGTTTATTACCAAGCACTTAGGGGATCATTTTTAATCGACCCCTTATTGACATaGTGGTTACTGCATTTCTTG +
Preference number: 4 (lower is better)
Translates to: HLHRGFVYYQALRGSFLIDPLLT*WLLHFL
Trigger: CAAGAAATGCAGTAACCAGCATGTCAATAAGGGGTC...GATTAAAAATGATCCCCTAAGTGCTTGGTAATAAACAAATCCTCTGTGGAGGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR GCA 90 bp GCAAGATTTACACTGATTTCCAGGAAGTCTTCCAATGACGTATGCTCTGAATTAGACCCCTTATTGACATaGTGGTTACTGCATTTCTTG +
Preference number: 4 (lower is better)
Translates to: ARFTLISRKSSNDVCSELDPLLT*WLLHFL
Trigger: CAAGAAATGCAGTAACCAGCATGTCAATAAGGGGTC...TAATTCAGAGCATACGTCATTGGAAGACTTCCTGGAAATCAGTGTAAATCTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR GCA 90 bp ACTTTCATAAAGAAGCAAAGTTGTATTTCCAGGTTCACTAGGTTATGGGAGAAACTTTTCCTCCAGTTTTaGTTCCTCCTGACCGTCTGT +
Preference number: 4 (lower is better)
Translates to: TFIKKQSCISRFTRLWEKLFLQF*FLLTVC
Trigger: ACAGACGGTCAGGAGGAAGCAAAACTGGAGGAAAAG...TTTCTCCCATAACCTAGTGAACCTGGAAATACAACTTTGCTTCTTTATGAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR GCA 90 bp AGGGTTCCTATTAAGTTAATACAATATCAAGTTTCACTGCCCGATTGCCTTACAAACAGTTCCCATACATaGAGACTCCCTTTGACTCTG +
Preference number: 4 (lower is better)
Translates to: RVPIKLIQYQVSLPDCLTNSSHT*RLPLTL
Trigger: CAGAGTCAAAGGGAGTCTGCATGTATGGGAACTGTT...TGTAAGGCAATCGGGCAGTGAAACTTGATATTGTATTAACTTAATAGGAACCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp AGGGTTCCTATTAAGTTAATACAATATCAAGTTTCACTGCCCGATTGCCTTACACTGGAGTTGTGCCTCTaGCCCATTCTCTATAAAACA +
Preference number: 4 (lower is better)
Translates to: RVPIKLIQYQVSLPDCLTLELCL*PILYKT
Trigger: TGTTTTATAGAGAATGGGGCAGAGGCACAACTCCAG...TGTAAGGCAATCGGGCAGTGAAACTTGATATTGTATTAACTTAATAGGAACCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp GTTAACGTAACTCCGCTCTCCAGAAAATCAATTAGTGCAAATCATTTGAAGCAAAGGAAAACACTAGCATaGTCTCTTGGTGACTACAGC +
Preference number: 4 (lower is better)
Translates to: VNVTPLSRKSISANHLKQRKTLA*SLGDYS
Trigger: GCTGTAGTCACCAAGAGAGCATGCTAGTGTTTTCCT...TTGCTTCAAATGATTTGCACTAATTGATTTTCTGGAGAGCGGAGTTACGTTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp ATCTCTCAGCTCTGTCAGCTAACATTTCCCCAAACTTATTCTACAATGTTTCCTCATATATCTGAGCTCTaGATAAGCAGGAACAAGAGG +
Preference number: 4 (lower is better)
Translates to: ISQLCQLTFPQTYSTMFPHISEL*ISRNKR
Trigger: CCTCTTGTTCCTGCTTATGCAGAGCTCAGATATATG...AGGAAACATTGTAGAATAAGTTTGGGGAAATGTTAGCTGACAGAGCTGAGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp TTTGAGGATGAGGTCCACTGTATACCACTTTTGACAAACCATGCTGGGATAGTGATGAAAACGAGTTCATaGTTTTTGAAGAACTCGGTT +
Preference number: 4 (lower is better)
Translates to: FEDEVHCIPLLTNHAGIVMKTSS*FLKNSV
Trigger: AACCGAGTTCTTCAAAAAGCATGAACTCGTTTTCAT...CACTATCCCAGCATGGTTTGTCAAAAGTGGTATACAGTGGACCTCATCCTCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp TCTTCAAAGAGAGAAGCTCAAGATTCTCACTTTGGGCTCTCTGAGTTTGTTTTCCAGGCATCATTTAAATaGCGAGAATTCCAACTCTTC +
Preference number: 4 (lower is better)
Translates to: SSKREAQDSHFGLSEFVFQASFK*REFQLF
Trigger: GAAGAGTTGGAATTCTCGGCATTTAAATGATGCCTG...GAAAACAAACTCAGAGAGCCCAAAGTGAGAATCTTGAGCTTCTCTCTTTGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440481.6
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp CTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAAGAAGCAAAGTTGTATTTGCTGAGCAGTTaGTTCACAATTGAAAAGAGC +
Preference number: 4 (lower is better)
Translates to: LSGIRMKDPGYFHKEAKLYLLSS*FTIEKS
Trigger: GCTCTTTTCAATTGTGAAGCAACTGCTCAGCAAATA...CAACTTTGCTTCTTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp ATCTCTCAGCTCTGTCAGCTAACATTTCCCCAAACTTATTCTACAATGTTTCCTCAGGAAGCTTATTATTaGACACACAAGCATGGTGCT +
Preference number: 4 (lower is better)
Translates to: ISQLCQLTFPQTYSTMFPQEAYY*THKHGA
Trigger: AGCACCATGCTTGTGTGTGCAATAATAAGCTTCCTG...AGGAAACATTGTAGAATAAGTTTGGGGAAATGTTAGCTGACAGAGCTGAGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR GCA 90 bp GAATTCCTGGAGTTGTGCCTCTGCCCCATTCTCTATAAAACAGTTCCCATACATAATTTTACCCAAAGCTaGTTGTTGTTCTCAATGAGT +
Preference number: 4 (lower is better)
Translates to: EFLELCLCPILYKTVPIHNFTQS*LLFSMS
Trigger: ACTCATTGAGAACAACAAGCAGCTTTGGGTAAAATT...ATGTATGGGAACTGTTTTATAGAGAATGGGGCAGAGGCACAACTCCAGGAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR GCA 90 bp ATAAAGTCAGGGGAGCCTTCAGAATTTAAGACATCAGGGCTCCTGTCAGGAATAAGGTTTTACTGCAACTaGTTACATAAAGACGAGATT +
Preference number: 4 (lower is better)
Translates to: IKSGEPSEFKTSGLLSGIRFYCN*LHKDEI
Trigger: AATCTCGTCTTTATGTAAGCAGTTGCAGTAAAACCT...TATTCCTGACAGGAGCCCTGATGTCTTAAATTCTGAAGGCTCCCCTGACTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679826.1
CDS-3UTR CCA 90 bp GTCTTTTCCACCTATGACCCCTTATTGACATGCTGGTTACTGCATTTCTTGATAATGCTGGAAGGTTCATaGTATACAGATGGTTTGGAT +
Preference number: 4 (lower is better)
Translates to: VFSTYDPLLTCWLLHFLIMLEGS*YTDGLD
Trigger: ATCCAAACCATCTGTATACCATGAACCTTCCAGCAT...TATCAAGAAATGCAGTAACCAGCATGTCAATAAGGGGTCATAGGTGGAAAAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp TTGCTTTTTCAAAACAAACTTCAGGCATCATTTAAATGCCGAGAATTCCAACTCCCATGGACCCAATGCTaGAAGGTTCATGGTATACAG +
Preference number: 4 (lower is better)
Translates to: LLFQNKLQASFKCREFQLPWTQC*KVHGIQ
Trigger: CTGTATACCATGAACCTTCCAGCATTGGGTCCATGG...GAGTTGGAATTCTCGGCATTTAAATGATGCCTGAAGTTTGTTTTGAAAAAGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp AGGGTTCCTATTAAGTTAATACAATATCAAGTTTCACTGCCCGATTGCCTTACATTTGACAAACCATGCTaGGATAGTGCACTCTCAGTC +
Preference number: 4 (lower is better)
Translates to: RVPIKLIQYQVSLPDCLTFDKPC*DSALSV
Trigger: GACTGAGAGTGCACTATCCCAGCATGGTTTGTCAAA...TGTAAGGCAATCGGGCAGTGAAACTTGATATTGTATTAACTTAATAGGAACCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp AAATGTTTCAGAGATAACAACAGAAATGCCTCTAGCCATCCCCTGGAATCATATACTGAAGAGAAACACTaGGCATGTAAGTTAAGGCAG +
Preference number: 4 (lower is better)
Translates to: KCFRDNNRNASSHPLESYTEEKH*ACKLRQ
Trigger: CTGCCTTAACTTACATGCCCAGTGTTTCTCTTCAGT...ATATGATTCCAGGGGATGGCTAGAGGCATTTCTGTTGTTATCTCTGAAACATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CCA 90 bp ATAAAACAGTTCCCATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACTATTCGAGAGGAAGTTaGTGTGATTTCAACTTGAAT +
Preference number: 4 (lower is better)
Translates to: IKQFPYMQTPFDSEGQTHYSRGS*CDFNLN
Trigger: ATTCAAGTTGAAATCACACCAACTTCCTCTCGAATA...GTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATGGGAACTGTTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CCA 90 bp ATAAAGTCAGGGGAGCCTTCAGAATTTAAGACATCAGGGCTCCTGTCAGGAATATATTCGAGAGGAAGTTaGTGTGATTTCAACTTGAAT +
Preference number: 4 (lower is better)
Translates to: IKSGEPSEFKTSGLLSGIYSRGS*CDFNLN
Trigger: ATTCAAGTTGAAATCACACCAACTTCCTCTCGAATA...TATTCCTGACAGGAGCCCTGATGTCTTAAATTCTGAAGGCTCCCCTGACTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CCA 90 bp CCACTGACTTGTTCAAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCCTTATTGACATGCTaGTTACTGCATTTCTTGATA +
Preference number: 4 (lower is better)
Translates to: PLTCSKDLLNTVAAVLAKPLLTC*LLHFLI
Trigger: TATCAAGAAATGCAGTAACCAGCATGTCAATAAGGG...TTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTTGAACAAGTCAGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp CTGTATTTCCATGTCTTTTCCACCTATGACCCCTTATTGACATGCTGGTTACTGCCCTTATTGACATGCTaGTTACTGCATTTCTTGATA +
Preference number: 4 (lower is better)
Translates to: LYFHVFSTYDPLLTCWLLPLLTC*LLHFLI
Trigger: TATCAAGAAATGCAGTAACCAGCATGTCAATAAGGG...CAGTAACCAGCATGTCAATAAGGGGTCATAGGTGGAAAAGACATGGAAATACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp GAATTCCTGGAGTTGTGCCTCTGCCCCATTCTCTATAAAACAGTTCCCATACATAATTCTGTATTTCCTTaGAGTGCAGTTATAAAGTGC +
Preference number: 4 (lower is better)
Translates to: EFLELCLCPILYKTVPIHNSVFP*SAVIKC
Trigger: GCACTTTATAACTGCACTCCAAGGAAATACAGAATT...ATGTATGGGAACTGTTTTATAGAGAATGGGGCAGAGGCACAACTCCAGGAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409923.5
ENST00000440481.6
CDS-3UTR CCA 90 bp ATAAAACAGTTCCCATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACGTTCTTTCCTATACTTaGCTTGTTACTACAATTGTG +
Preference number: 4 (lower is better)
Translates to: IKQFPYMQTPFDSEGQTHVLSYT*LVTTIV
Trigger: CACAATTGTAGTAACAAGCCAAGTATAGGAAAGAAC...GTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATGGGAACTGTTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CCA 90 bp TTGCTTTTTCAAAACAAACTTCAGGCATCATTTAAATGCCGAGAATTCCAACTCGTCTTAGCCAAACCATaGCTACTAGGCTTAGGTAGG +
Preference number: 4 (lower is better)
Translates to: LLFQNKLQASFKCREFQLVLAKP*LLGLGR
Trigger: CCTACCTAAGCCTAGTAGCCATGGTTTGGCTAAGAC...GAGTTGGAATTCTCGGCATTTAAATGATGCCTGAAGTTTGTTTTGAAAAAGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp TTCAAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTATAAGCTTTTCTTCTTaGAGACTACAAGCGGAAAAC +
Preference number: 4 (lower is better)
Translates to: FKGFTKYSRCGLSQTMATISFSS*RLQAEN
Trigger: GTTTTCCGCTTGTAGTCTCCAAGAAGAAAAGCTTAT...AGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp CTGTATTTCCATGTCTTTTCCACCTATGACCCCTTATTGACATGCTGGTTACTGATAAGCTTTTCTTCTTaGAGACTACAAGCGGAAAAC +
Preference number: 4 (lower is better)
Translates to: LYFHVFSTYDPLLTCWLLISFSS*RLQAEN
Trigger: GTTTTCCGCTTGTAGTCTCCAAGAAGAAAAGCTTAT...CAGTAACCAGCATGTCAATAAGGGGTCATAGGTGGAAAAGACATGGAAATACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp AAATGTTTCAGAGATAACAACAGAAATGCCTCTAGCCATCCCCTGGAATCATATGCTCATCTTCATCTTTaGATGAATACGAGTGGACCT +
Preference number: 4 (lower is better)
Translates to: KCFRDNNRNASSHPLESYAHLHL*MNTSGP
Trigger: AGGTCCACTCGTATTCATCCAAAGATGAAGATGAGC...ATATGATTCCAGGGGATGGCTAGAGGCATTTCTGTTGTTATCTCTGAAACATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CCA 90 bp TCAAAGAGAGAAGCTCAAGATTCTCACTTTGGGCTCTCTGAGTTTGTTTTCGAGGACCCCAATTTTGTGTaGAATCCTTCTCATGATAAA +
Preference number: 4 (lower is better)
Translates to: SKREAQDSHFGLSEFVFEDPNFV*NPSHDK
Trigger: TTTATCATGAGAAGGATTCCACACAAAATTGGGGTC...CTCGAAAACAAACTCAGAGAGCCCAAAGTGAGAATCTTGAGCTTCTCTCTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000440481.6
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp AAATGTTTCAGAGATAACAACAGAAATGCCTCTAGCCATCCCCTGGAATCATATCCCAAAAGCTCTCAATaGCTCAACTTACCTAAGTCT +
Preference number: 4 (lower is better)
Translates to: KCFRDNNRNASSHPLESYPKSSQ*LNLPKS
Trigger: AGACTTAGGTAAGTTGAGCCATTGAGAGCTTTTGGG...ATATGATTCCAGGGGATGGCTAGAGGCATTTCTGTTGTTATCTCTGAAACATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CCA 90 bp GCAAGATTTACACTGATTTCCAGGAAGTCTTCCAATGACGTATGCTCTGAATTAACAACCAAATCAAGGTaGCACTTTCTCTTACCACAG +
Preference number: 4 (lower is better)
Translates to: ARFTLISRKSSNDVCSELTTKSR*HFLLPQ
Trigger: CTGTGGTAAGAGAAAGTGCCACCTTGATTTGGTTGT...TAATTCAGAGCATACGTCATTGGAAGACTTCCTGGAAATCAGTGTAAATCTTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CCA 90 bp AATGATGACTTAAGTACATTTGCTTTACAGGGGAACCGCAACCATAGCCAAAAGGCCCAAAGTTTGTATTaGAAGTTAGTGATAGAGGCA +
Preference number: 4 (lower is better)
Translates to: NDDLSTFALQGNRNHSQKAQSLY*KLVIEA
Trigger: TGCCTCTATCACTAACTTCCAATACAAACTTTGGGC...CTTTTGGCTATGGTTGCGGTTCCCCTGTAAAGCAAATGTACTTAAGTCATCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CCA 90 bp GATCTCTCAGCTCTGTCAGCTAACATTTCCCCAAACTTATTCTACAATGTTTCCTCTCCACTCACTTTGTaGCTCCTGGATAACTTTATA +
Preference number: 4 (lower is better)
Translates to: DLSALSANISPNLFYNVSSPLTL*LLDNFI
Trigger: TATAAAGTTATCCAGGAGCCACAAAGTGAGTGGAGA...GGAAACATTGTAGAATAAGTTTGGGGAAATGTTAGCTGACAGAGCTGAGAGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681402.1
CDS-3UTR TCA 90 bp ATTCTGTATTTCCATGTCTTTTCCACCTATGACCCCTTATTGACATGCTGGTTACACAACCCCTTTCTCTaGAGTAAACATTTTTCCACA +
Preference number: 4 (lower is better)
Translates to: ILYFHVFSTYDPLLTCWLHNPFL*SKHFST
Trigger: TGTGGAAAAATGTTTACTTCAGAGAAAGGGGTTGTG...TAACCAGCATGTCAATAAGGGGTCATAGGTGGAAAAGACATGGAAATACAGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp TTTCCAAAGTCCAGCAGTAGGGTAAATCAGCTTTACAGCCTATTATACCTTAATACAAATTTGACACAGTaGCTGAAGAGAAACACTGGG +
Preference number: 4 (lower is better)
Translates to: FPKSSSRVNQLYSLLYLNTNLTQ*LKRNTG
Trigger: CCCAGTGTTTCTCTTCAGTCACTGTGTCAAATTTGT...ATTAAGGTATAATAGGCTGTAAAGCTGATTTACCCTACTGCTGGACTTTGGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR TCA 90 bp TGGTGTGATTTCAACTTGAATACACCTTGTACCTTCCTTATTAGATTTCATGGGACAAATTTGACACAGTaGCTGAAGAGAAACACTGGG +
Preference number: 4 (lower is better)
Translates to: WCDFNLNTPCTFLIRFHGTNLTQ*LKRNTG
Trigger: CCCAGTGTTTCTCTTCAGTCACTGTGTCAAATTTGT...CCCATGAAATCTAATAAGGAAGGTACAAGGTGTATTCAAGTTGAAATCACACCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp TCTTCAAAGAGAGAAGCTCAAGATTCTCACTTTGGGCTCTCTGAGTTTGTTTTCTTAACATTTGCACCATaGATCCTGAAGAAACTGGTA +
Preference number: 4 (lower is better)
Translates to: SSKREAQDSHFGLSEFVFLTFAP*ILKKLV
Trigger: TACCAGTTTCTTCAGGATTCATGGTGCAAATGTTAA...GAAAACAAACTCAGAGAGCCCAAAGTGAGAATCTTGAGCTTCTCTCTTTGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp GATTTCAACTTGAATACACCTTGTACCTTCCTTATTAGATTTCATGGGACCATGGGTGTGATTTCAACTTaGATACACCTTGTACCTTCC +
Preference number: 4 (lower is better)
Translates to: DFNLNTPCTFLIRFHGTMGVIST*IHLVPS
Trigger: GGAAGGTACAAGGTGTATTCAAGTTGAAATCACACC...CATGGTCCCATGAAATCTAATAAGGAAGGTACAAGGTGTATTCAAGTTGAAATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp GCAAGATTTACACTGATTTCCAGGAAGTCTTCCAATGACGTATGCTCTGAATTACCTTACAACCTCACATaGGACATAACCAACTTGATT +
Preference number: 4 (lower is better)
Translates to: ARFTLISRKSSNDVCSELPYNLT*DITNLI
Trigger: AATCAAGTTGGTTATGTCTCATGTGAGGTTGTAAGG...TAATTCAGAGCATACGTCATTGGAAGACTTCCTGGAAATCAGTGTAAATCTTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR TCA 90 bp AAATGTTTCAGAGATAACAACAGAAATGCCTCTAGCCATCCCCTGGAATCATATTTGCAAGATTTACACTaGTTTCCAGGAAGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: KCFRDNNRNASSHPLESYLQDLH*FPGSLP
Trigger: TGGAAGACTTCCTGGAAATCAGTGTAAATCTTGCAA...ATATGATTCCAGGGGATGGCTAGAGGCATTTCTGTTGTTATCTCTGAAACATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR TCA 90 bp ATTGACATGCTGGTTACTGCATTTCTTGATATTCGAGAGGAAGTTGGTGTGATTTTGCAAGATTTACACTaGTTTCCAGGAAGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: IDMLVTAFLDIREEVGVILQDLH*FPGSLP
Trigger: TGGAAGACTTCCTGGAAATCAGTGTAAATCTTGCAA...AATCACACCAACTTCCTCTCGAATATCAAGAAATGCAGTAACCAGCATGTCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp GAGAAACACTGGGCATGTAAGTTAAGGCAGCATTGTAACACAACAAAAGGAATGTATACAGTGGTATCTTaGGAGCTATGTTGCAAGATT +
Preference number: 4 (lower is better)
Translates to: EKHWACKLRQHCNTTKGMYTVVS*ELCCKI
Trigger: AATCTTGCAACATAGCTCTCAAGATACCACTGTATA...CATTCCTTTTGTTGTGTTACAATGCTGCCTTAACTTACATGCCCAGTGTTTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp AAATGTTTCAGAGATAACAACAGAAATGCCTCTAGCCATCCCCTGGAATCATATCGAGTTCATGCTTTTTaGAGAACTCGGTTTAAACTG +
Preference number: 4 (lower is better)
Translates to: KCFRDNNRNASSHPLESYRVHAF*RTRFKL
Trigger: CAGTTTAAACCGAGTTCTTCAAAAAGCATGAACTCG...ATATGATTCCAGGGGATGGCTAGAGGCATTTCTGTTGTTATCTCTGAAACATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp GTGAGACCACTGGGAATTCTACATATTAGACGAGTAATTTGTTTGCACTCTGATTCAGAACCATTTCACTaGGCAAGTCTTCAGAGATTT +
Preference number: 4 (lower is better)
Translates to: VRPLGILHIRRVICLHSDSEPFH*ASLQRF
Trigger: AAATCTCTGAAGACTTGCTCAGTGAAATGGTTCTGA...ATCAGAGTGCAAACAAATTACTCGTCTAATATGTAGAATTCCCAGTGGTCTCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp GATCTCTCAGCTCTGTCAGCTAACATTTCCCCAAACTTATTCTACAATGTTTCCATCTTTATAAGAAAGTaGCCTACAAAAGCTACCCCA +
Preference number: 4 (lower is better)
Translates to: DLSALSANISPNLFYNVSIFIRK*PTKATP
Trigger: TGGGGTAGCTTTTGTAGGTCACTTTCTTATAAAGAT...GGAAACATTGTAGAATAAGTTTGGGGAAATGTTAGCTGACAGAGCTGAGAGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp GATCTCTCAGCTCTGTCAGCTAACATTTCCCCAAACTTATTCTACAATGTTTCCCAACTCTTCAAGTCTTaGGAGCTTGCCTTAAAAATT +
Preference number: 4 (lower is better)
Translates to: DLSALSANISPNLFYNVSQLFKS*ELALKI
Trigger: AATTTTTAAGGCAAGCTCTCAAGACTTGAAGAGTTG...GGAAACATTGTAGAATAAGTTTGGGGAAATGTTAGCTGACAGAGCTGAGAGATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp AATGATGACTTAAGTACATTTGCTTTACAGGGGAACCGCAACCATAGCCAAAAGCAACTCTTCAAGTCTTaGGAGCTTGCCTTAAAAATT +
Preference number: 4 (lower is better)
Translates to: NDDLSTFALQGNRNHSQKQLFKS*ELALKI
Trigger: AATTTTTAAGGCAAGCTCTCAAGACTTGAAGAGTTG...CTTTTGGCTATGGTTGCGGTTCCCCTGTAAAGCAAATGTACTTAAGTCATCATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp AATGATGACTTAAGTACATTTGCTTTACAGGGGAACCGCAACCATAGCCAAAAGGTTAGAAGGACAAAGTaGTGTTACCTAAATTTGCCT +
Preference number: 4 (lower is better)
Translates to: NDDLSTFALQGNRNHSQKVRRTK*CYLNLP
Trigger: AGGCAAATTTAGGTAACATCACTTTGTCCTTCTAAC...CTTTTGGCTATGGTTGCGGTTCCCCTGTAAAGCAAATGTACTTAAGTCATCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR TCA 90 bp GTGAGACCACTGGGAATTCTACATATTAGACGAGTAATTTGTTTGCACTCTGATTCCTACGTTGTTTTCTaGTTAGTCCAGATACCATTC +
Preference number: 4 (lower is better)
Translates to: VRPLGILHIRRVICLHSDSYVVF*LVQIPF
Trigger: GAATGGTATCTGGACTAATCAGAAAACAACGTAGGA...ATCAGAGTGCAAACAAATTACTCGTCTAATATGTAGAATTCCCAGTGGTCTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR TCA 90 bp GTGAGACCACTGGGAATTCTACATATTAGACGAGTAATTTGTTTGCACTCTGATCTAATACTTAAACTCTaGCAACCATTCCTCCACAAC +
Preference number: 4 (lower is better)
Translates to: VRPLGILHIRRVICLHSDLILKL*QPFLHN
Trigger: GTTGTGGAGGAATGGTTGTCAGAGTTTAAGTATTAG...ATCAGAGTGCAAACAAATTACTCGTCTAATATGTAGAATTCCCAGTGGTCTCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679826.1
CDS-3UTR GCA 90 bp TTTCCAAAGTCCAGCAGTAGGGTAAATCAGCTTTACAGCCTATTATACCTTAATGAAGAAGAGCTTCAATaGATCCACTGCTATGCACAT +
Preference number: 4 (lower is better)
Translates to: FPKSSSRVNQLYSLLYLNEEELQ*IHCYAH
Trigger: ATGTGCATAGCAGTGGATGCATTGAAGCTCTTCTTC...ATTAAGGTATAATAGGCTGTAAAGCTGATTTACCCTACTGCTGGACTTTGGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR GCA 90 bp GATTTCAACTTGAATACACCTTGTACCTTCCTTATTAGATTTCATGGGACCATGACTTTTGACAAACCATaGTGGGATAGTGCACTCTCA +
Preference number: 4 (lower is better)
Translates to: DFNLNTPCTFLIRFHGTMTFDKP*WDSALS
Trigger: TGAGAGTGCACTATCCCAGCATGGTTTGTCAAAAGT...CATGGTCCCATGAAATCTAATAAGGAAGGTACAAGGTGTATTCAAGTTGAAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp GTTAACGTAACTCCGCTCTCCAGAAAATCAATTAGTGCAAATCATTTGAAGCAAACTTTTGACAAACCATaGTGGGATAGTGCACTCTCA +
Preference number: 4 (lower is better)
Translates to: VNVTPLSRKSISANHLKQTFDKP*WDSALS
Trigger: TGAGAGTGCACTATCCCAGCATGGTTTGTCAAAAGT...TTGCTTCAAATGATTTGCACTAATTGATTTTCTGGAGAGCGGAGTTACGTTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp TTTCCAAAGTCCAGCAGTAGGGTAAATCAGCTTTACAGCCTATTATACCTTAATGACCCCTTATTGACATaGTGGTTACTGCATTTCTTG +
Preference number: 4 (lower is better)
Translates to: FPKSSSRVNQLYSLLYLNDPLLT*WLLHFL
Trigger: CAAGAAATGCAGTAACCAGCATGTCAATAAGGGGTC...ATTAAGGTATAATAGGCTGTAAAGCTGATTTACCCTACTGCTGGACTTTGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR GCA 90 bp ACTTTCATAAAGAAGCAAAGTTGTATTTCCAGGTTCACTAGGTTATGGGAGAAACTGGAGTTGTGCCTCTaGCCCATTCTCTATAAAACA +
Preference number: 4 (lower is better)
Translates to: TFIKKQSCISRFTRLWEKLELCL*PILYKT
Trigger: TGTTTTATAGAGAATGGGGCAGAGGCACAACTCCAG...TTTCTCCCATAACCTAGTGAACCTGGAAATACAACTTTGCTTCTTTATGAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR GCA 90 bp TTTCCAAAGTCCAGCAGTAGGGTAAATCAGCTTTACAGCCTATTATACCTTAATTGTCCAGAGTATAAATaGTTTGGCAGCCTTCAAAGC +
Preference number: 4 (lower is better)
Translates to: FPKSSSRVNQLYSLLYLNCPEYK*FGSLQS
Trigger: GCTTTGAAGGCTGCCAAAGCATTTATACTCTGGACA...ATTAAGGTATAATAGGCTGTAAAGCTGATTTACCCTACTGCTGGACTTTGGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp AGGGTTCCTATTAAGTTAATACAATATCAAGTTTCACTGCCCGATTGCCTTACATGTCCAGAGTATAAATaGTTTGGCAGCCTTCAAAGC +
Preference number: 4 (lower is better)
Translates to: RVPIKLIQYQVSLPDCLTCPEYK*FGSLQS
Trigger: GCTTTGAAGGCTGCCAAAGCATTTATACTCTGGACA...TGTAAGGCAATCGGGCAGTGAAACTTGATATTGTATTAACTTAATAGGAACCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp TTAACAGTAACTCTCTTCTTGGGCCTTTTACCCAGATTTGGCAAATTCCATAATGTTTCACTGCCCGATTaGCTTACAGTTCTTAACTAC +
Preference number: 4 (lower is better)
Translates to: LTVTLFLGLLPRFGKFHNVSLPD*LTVLNY
Trigger: GTAGTTAAGAACTGTAAGGCAATCGGGCAGTGAAAC...ATTATGGAATTTGCCAAATCTGGGTAAAAGGCCCAAGAAGAGAGTTACTGTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR GCA 90 bp ATCTCTCAGCTCTGTCAGCTAACATTTCCCCAAACTTATTCTACAATGTTTCCTAATATCAAGTTTCACTaGCCGATTGCCTTACAGTTC +
Preference number: 4 (lower is better)
Translates to: ISQLCQLTFPQTYSTMFPNIKFH*PIALQF
Trigger: GAACTGTAAGGCAATCGGGCAGTGAAACTTGATATT...AGGAAACATTGTAGAATAAGTTTGGGGAAATGTTAGCTGACAGAGCTGAGAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp ATCTCTCAGCTCTGTCAGCTAACATTTCCCCAAACTTATTCTACAATGTTTCCTCAGGCATCATTTAAATaGCGAGAATTCCAACTCTTC +
Preference number: 4 (lower is better)
Translates to: ISQLCQLTFPQTYSTMFPQASFK*REFQLF
Trigger: GAAGAGTTGGAATTCTCGGCATTTAAATGATGCCTG...AGGAAACATTGTAGAATAAGTTTGGGGAAATGTTAGCTGACAGAGCTGAGAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp ATCTCTCAGCTCTGTCAGCTAACATTTCCCCAAACTTATTCTACAATGTTTCCTAATCTTCAAGAACCCTaGTTGCTGTGTCCACTAATT +
Preference number: 4 (lower is better)
Translates to: ISQLCQLTFPQTYSTMFPNLQEP*LLCPLI
Trigger: AATTAGTGGACACAGCAAGCAGGGTTCTTGAAGATT...AGGAAACATTGTAGAATAAGTTTGGGGAAATGTTAGCTGACAGAGCTGAGAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CCA 90 bp TTGCTTTTTCAAAACAAACTTCAGGCATCATTTAAATGCCGAGAATTCCAACTCTTTGACAAACCATGCTaGGATAGTGCACTCTCAGTC +
Preference number: 4 (lower is better)
Translates to: LLFQNKLQASFKCREFQLFDKPC*DSALSV
Trigger: GACTGAGAGTGCACTATCCCAGCATGGTTTGTCAAA...GAGTTGGAATTCTCGGCATTTAAATGATGCCTGAAGTTTGTTTTGAAAAAGCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp TTAACAGTAACTCTCTTCTTGGGCCTTTTACCCAGATTTGGCAAATTCCATAATACTGAAGAGAAACACTaGGCATGTAAGTTAAGGCAG +
Preference number: 4 (lower is better)
Translates to: LTVTLFLGLLPRFGKFHNTEEKH*ACKLRQ
Trigger: CTGCCTTAACTTACATGCCCAGTGTTTCTCTTCAGT...ATTATGGAATTTGCCAAATCTGGGTAAAAGGCCCAAGAAGAGAGTTACTGTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CCA 90 bp GATTTCAACTTGAATACACCTTGTACCTTCCTTATTAGATTTCATGGGACCATGACTGAAGAGAAACACTaGGCATGTAAGTTAAGGCAG +
Preference number: 4 (lower is better)
Translates to: DFNLNTPCTFLIRFHGTMTEEKH*ACKLRQ
Trigger: CTGCCTTAACTTACATGCCCAGTGTTTCTCTTCAGT...CATGGTCCCATGAAATCTAATAAGGAAGGTACAAGGTGTATTCAAGTTGAAATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp TTTCCAAAGTCCAGCAGTAGGGTAAATCAGCTTTACAGCCTATTATACCTTAATACTGAAGAGAAACACTaGGCATGTAAGTTAAGGCAG +
Preference number: 4 (lower is better)
Translates to: FPKSSSRVNQLYSLLYLNTEEKH*ACKLRQ
Trigger: CTGCCTTAACTTACATGCCCAGTGTTTCTCTTCAGT...ATTAAGGTATAATAGGCTGTAAAGCTGATTTACCCTACTGCTGGACTTTGGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CCA 90 bp GTCTCTTCAAAGAGAGAAGCTCAAGATTCTCACTTTGGGCTCTCTGAGTTTGTTGTTCTTTCCTATACTTaGCTTGTTACTACAATTGTG +
Preference number: 4 (lower is better)
Translates to: VSSKREAQDSHFGLSEFVVLSYT*LVTTIV
Trigger: CACAATTGTAGTAACAAGCCAAGTATAGGAAAGAAC...AACAAACTCAGAGAGCCCAAAGTGAGAATCTTGAGCTTCTCTCTTTGAAGAGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp CTGTATTTCCATGTCTTTTCCACCTATGACCCCTTATTGACATGCTGGTTACTGGTTCTTTCCTATACTTaGCTTGTTACTACAATTGTG +
Preference number: 4 (lower is better)
Translates to: LYFHVFSTYDPLLTCWLLVLSYT*LVTTIV
Trigger: CACAATTGTAGTAACAAGCCAAGTATAGGAAAGAAC...CAGTAACCAGCATGTCAATAAGGGGTCATAGGTGGAAAAGACATGGAAATACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp GTTAACGTAACTCCGCTCTCCAGAAAATCAATTAGTGCAAATCATTTGAAGCAAGGCTTAGGTAGGGATTaGCTGGTTGTTAAAGTAAGT +
Preference number: 4 (lower is better)
Translates to: VNVTPLSRKSISANHLKQGLGRD*LVVKVS
Trigger: ACTTACTTTAACAACCAGCCAATCCCTACCTAAGCC...TTGCTTCAAATGATTTGCACTAATTGATTTTCTGGAGAGCGGAGTTACGTTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp TCTTCAAAGAGAGAAGCTCAAGATTCTCACTTTGGGCTCTCTGAGTTTGTTTTCATAAGCTTTTCTTCTTaGAGACTACAAGCGGAAAAC +
Preference number: 4 (lower is better)
Translates to: SSKREAQDSHFGLSEFVFISFSS*RLQAEN
Trigger: GTTTTCCGCTTGTAGTCTCCAAGAAGAAAAGCTTAT...GAAAACAAACTCAGAGAGCCCAAAGTGAGAATCTTGAGCTTCTCTCTTTGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp GATCTCTCAGCTCTGTCAGCTAACATTTCCCCAAACTTATTCTACAATGTTTCCATAAGCTTTTCTTCTTaGAGACTACAAGCGGAAAAC +
Preference number: 4 (lower is better)
Translates to: DLSALSANISPNLFYNVSISFSS*RLQAEN
Trigger: GTTTTCCGCTTGTAGTCTCCAAGAAGAAAAGCTTAT...GGAAACATTGTAGAATAAGTTTGGGGAAATGTTAGCTGACAGAGCTGAGAGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp AGGGTTCCTATTAAGTTAATACAATATCAAGTTTCACTGCCCGATTGCCTTACAGCTTGCTCATTTAGTTaGTGTGTAGTGCTGTATGGT +
Preference number: 4 (lower is better)
Translates to: RVPIKLIQYQVSLPDCLTACSFS*CVVLYG
Trigger: ACCATACAGCACTACACACCAACTAAATGAGCAAGC...TGTAAGGCAATCGGGCAGTGAAACTTGATATTGTATTAACTTAATAGGAACCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CCA 90 bp CTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAAGAAGCAAAGTTGAGGTCATCTGATATTTaGGAAGTTCAACAAGGATTT +
Preference number: 4 (lower is better)
Translates to: LSGIRMKDPGYFHKEAKLRSSDI*EVQQGF
Trigger: AAATCCTTGTTGAACTTCCCAAATATCAGATGACCT...CAACTTTGCTTCTTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
3UTR CAA 72 bp GACCCAATGCTGGAAGGTTCATGGTATACAGATGGTTaGGATAAAGATGGAATCGTAAAACTCAATACTTTG +
Preference number: 4 (lower is better)
Translates to: DPMLEGSWYTDG*DKDGIVKLNTL
Trigger: CAAAGTATTGAGTTTTACGATTCCATCTTTATCCAAACCATCTGTATACCATGAACCTTCCAGCATTGGGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp TTAATTCTGTATTTCCATGTCTTTTCCACCTATGACCCCTTATTGACATGCTGGTTAACATTTGCACCATaGATCCTGAAGAAACTGGTA +
Preference number: 4 (lower is better)
Translates to: LILYFHVFSTYDPLLTCWLTFAP*ILKKLV
Trigger: TACCAGTTTCTTCAGGATTCATGGTGCAAATGTTAA...CCAGCATGTCAATAAGGGGTCATAGGTGGAAAAGACATGGAAATACAGAATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp ACTTTCATAAAGAAGCAAAGTTGTATTTCCAGGTTCACTAGGTTATGGGAGAAAGAGAGGAAGTTGGTGTaGTTTCAACTTGAATACACC +
Preference number: 4 (lower is better)
Translates to: TFIKKQSCISRFTRLWEKERKLV*FQLEYT
Trigger: GGTGTATTCAAGTTGAAATCACACCAACTTCCTCTC...TTTCTCCCATAACCTAGTGAACCTGGAAATACAACTTTGCTTCTTTATGAAAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR TCA 90 bp TGGTGTGATTTCAACTTGAATACACCTTGTACCTTCCTTATTAGATTTCATGGGCCTTACAACCTCACATaGGACATAACCAACTTGATT +
Preference number: 4 (lower is better)
Translates to: WCDFNLNTPCTFLIRFHGPYNLT*DITNLI
Trigger: AATCAAGTTGGTTATGTCTCATGTGAGGTTGTAAGG...CCCATGAAATCTAATAAGGAAGGTACAAGGTGTATTCAAGTTGAAATCACACCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp AAATGTTTCAGAGATAACAACAGAAATGCCTCTAGCCATCCCCTGGAATCATATAGACCTAGAGTGGCATaGAATTCTGCATTTTTAACA +
Preference number: 4 (lower is better)
Translates to: KCFRDNNRNASSHPLESYRPRVA*NSAFLT
Trigger: TGTTAAAAATGCAGAATTTCATGCCACTCTAGGTCT...ATATGATTCCAGGGGATGGCTAGAGGCATTTCTGTTGTTATCTCTGAAACATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp GTGAGACCACTGGGAATTCTACATATTAGACGAGTAATTTGTTTGCACTCTGATCCCAATTTTCAAATTTaGAAGTTCAGTGGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: VRPLGILHIRRVICLHSDPNFQI*KFSGEK
Trigger: TTTCTCCCCACTGAACTTTCAAATTTGAAAATTGGG...ATCAGAGTGCAAACAAATTACTCGTCTAATATGTAGAATTCCCAGTGGTCTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp AAATGTTTCAGAGATAACAACAGAAATGCCTCTAGCCATCCCCTGGAATCATATATCTTTATAAGAAAGTaGCCTACAAAAGCTACCCCA +
Preference number: 4 (lower is better)
Translates to: KCFRDNNRNASSHPLESYIFIRK*PTKATP
Trigger: TGGGGTAGCTTTTGTAGGTCACTTTCTTATAAAGAT...ATATGATTCCAGGGGATGGCTAGAGGCATTTCTGTTGTTATCTCTGAAACATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp TGGTGTGATTTCAACTTGAATACACCTTGTACCTTCCTTATTAGATTTCATGGGTCTGGGACAGTCCCTTaGAAAGTCTATTTTTGTTTC +
Preference number: 4 (lower is better)
Translates to: WCDFNLNTPCTFLIRFHGSGTVP*KVYFCF
Trigger: GAAACAAAAATAGACTTTTCAAGGGACTGTCCCAGA...CCCATGAAATCTAATAAGGAAGGTACAAGGTGTATTCAAGTTGAAATCACACCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp GCAAGATTTACACTGATTTCCAGGAAGTCTTCCAATGACGTATGCTCTGAATTACAACTCTTCAAGTCTTaGGAGCTTGCCTTAAAAATT +
Preference number: 4 (lower is better)
Translates to: ARFTLISRKSSNDVCSELQLFKS*ELALKI
Trigger: AATTTTTAAGGCAAGCTCTCAAGACTTGAAGAGTTG...TAATTCAGAGCATACGTCATTGGAAGACTTCCTGGAAATCAGTGTAAATCTTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp GCAAGATTTACACTGATTTCCAGGAAGTCTTCCAATGACGTATGCTCTGAATTAATGAGTAATATTTGCTaGGCAGTTGCTTCACAATTG +
Preference number: 4 (lower is better)
Translates to: ARFTLISRKSSNDVCSELMSNIC*AVASQL
Trigger: CAATTGTGAAGCAACTGCTCAGCAAATATTACTCAT...TAATTCAGAGCATACGTCATTGGAAGACTTCCTGGAAATCAGTGTAAATCTTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp ATGCTGGTTACTGCATTTCTTGATATTCGAGAGGAAGTTGGTGTGATTTCAACTATCCCTGTTAACATTTaGACCATGAATCCTGAAGAA +
Preference number: 4 (lower is better)
Translates to: MLVTAFLDIREEVGVISTIPVNI*TMNPEE
Trigger: TTCTTCAGGATTCATGGTGCAAATGTTAACAGGGAT...AGTTGAAATCACACCAACTTCCTCTCGAATATCAAGAAATGCAGTAACCAGCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp GCAAGATTTACACTGATTTCCAGGAAGTCTTCCAATGACGTATGCTCTGAATTAATCCCTGTTAACATTTaGACCATGAATCCTGAAGAA +
Preference number: 4 (lower is better)
Translates to: ARFTLISRKSSNDVCSELIPVNI*TMNPEE
Trigger: TTCTTCAGGATTCATGGTGCAAATGTTAACAGGGAT...TAATTCAGAGCATACGTCATTGGAAGACTTCCTGGAAATCAGTGTAAATCTTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR GCA 90 bp GCAAGATTTACACTGATTTCCAGGAAGTCTTCCAATGACGTATGCTCTGAATTATATTTGCTGAGCAGTTaGTTCACAATTGAAAAGAGC +
Preference number: 4 (lower is better)
Translates to: ARFTLISRKSSNDVCSELYLLSS*FTIEKS
Trigger: GCTCTTTTCAATTGTGAAGCAACTGCTCAGCAAATA...TAATTCAGAGCATACGTCATTGGAAGACTTCCTGGAAATCAGTGTAAATCTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp GTTAACGTAACTCCGCTCTCCAGAAAATCAATTAGTGCAAATCATTTGAAGCAAATGCTGGAAGGTTCATaGTATACAGATGGTTTGGAT +
Preference number: 4 (lower is better)
Translates to: VNVTPLSRKSISANHLKQMLEGS*YTDGLD
Trigger: ATCCAAACCATCTGTATACCATGAACCTTCCAGCAT...TTGCTTCAAATGATTTGCACTAATTGATTTTCTGGAGAGCGGAGTTACGTTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp GATCTCTCAGCTCTGTCAGCTAACATTTCCCCAAACTTATTCTACAATGTTTCCTATTCGAGAGGAAGTTaGTGTGATTTCAACTTGAAT +
Preference number: 4 (lower is better)
Translates to: DLSALSANISPNLFYNVSYSRGS*CDFNLN
Trigger: ATTCAAGTTGAAATCACACCAACTTCCTCTCGAATA...GGAAACATTGTAGAATAAGTTTGGGGAAATGTTAGCTGACAGAGCTGAGAGATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp GCAACCAGCAATGGCTCTGGATATAATTCTAGCTGGGCTCTGTATATAATATCATATTCGAGAGGAAGTTaGTGTGATTTCAACTTGAAT +
Preference number: 4 (lower is better)
Translates to: ATSNGSGYNSSWALYIISYSRGS*CDFNLN
Trigger: ATTCAAGTTGAAATCACACCAACTTCCTCTCGAATA...TGATATTATATACAGAGCCCAGCTAGAATTATATCCAGAGCCATTGCTGGTTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp AAATGTTTCAGAGATAACAACAGAAATGCCTCTAGCCATCCCCTGGAATCATATCCCTTATTGACATGCTaGTTACTGCATTTCTTGATA +
Preference number: 4 (lower is better)
Translates to: KCFRDNNRNASSHPLESYPLLTC*LLHFLI
Trigger: TATCAAGAAATGCAGTAACCAGCATGTCAATAAGGG...ATATGATTCCAGGGGATGGCTAGAGGCATTTCTGTTGTTATCTCTGAAACATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CCA 90 bp ATCTCTCAGCTCTGTCAGCTAACATTTCCCCAAACTTATTCTACAATGTTTCCTATAAGCTTTTCTTCTTaGAGACTACAAGCGGAAAAC +
Preference number: 4 (lower is better)
Translates to: ISQLCQLTFPQTYSTMFPISFSS*RLQAEN
Trigger: GTTTTCCGCTTGTAGTCTCCAAGAAGAAAAGCTTAT...AGGAAACATTGTAGAATAAGTTTGGGGAAATGTTAGCTGACAGAGCTGAGAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp GTGAGACCACTGGGAATTCTACATATTAGACGAGTAATTTGTTTGCACTCTGATATAAGCTTTTCTTCTTaGAGACTACAAGCGGAAAAC +
Preference number: 4 (lower is better)
Translates to: VRPLGILHIRRVICLHSDISFSS*RLQAEN
Trigger: GTTTTCCGCTTGTAGTCTCCAAGAAGAAAAGCTTAT...ATCAGAGTGCAAACAAATTACTCGTCTAATATGTAGAATTCCCAGTGGTCTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp ACTTTCATAAAGAAGCAAAGTTGTATTTCCAGGTTCACTAGGTTATGGGAGAAATTGCAAGATTTACACTaGTTTCCAGGAAGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: TFIKKQSCISRFTRLWEKLQDLH*FPGSLP
Trigger: TGGAAGACTTCCTGGAAATCAGTGTAAATCTTGCAA...TTTCTCCCATAACCTAGTGAACCTGGAAATACAACTTTGCTTCTTTATGAAAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR TCA 90 bp TTGCTTTTTCAAAACAAACTTCAGGCATCATTTAAATGCCGAGAATTCCAACTCCTAGAGAGGTCTAAATaGGGTTCCATTACAGTGATA +
Preference number: 4 (lower is better)
Translates to: LLFQNKLQASFKCREFQLLERSK*GSITVI
Trigger: TATCACTGTAATGGAACCTCATTTAGACCTCTCTAG...GAGTTGGAATTCTCGGCATTTAAATGATGCCTGAAGTTTGTTTTGAAAAAGCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp TTTCCAAAGTCCAGCAGTAGGGTAAATCAGCTTTACAGCCTATTATACCTTAATATCTTTATAAGAAAGTaGCCTACAAAAGCTACCCCA +
Preference number: 4 (lower is better)
Translates to: FPKSSSRVNQLYSLLYLNIFIRK*PTKATP
Trigger: TGGGGTAGCTTTTGTAGGTCACTTTCTTATAAAGAT...ATTAAGGTATAATAGGCTGTAAAGCTGATTTACCCTACTGCTGGACTTTGGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp ACTTTCATAAAGAAGCAAAGTTGTATTTCCAGGTTCACTAGGTTATGGGAGAAAAGCATGCCGTACTTATaGCCTGTCAATTGCTATATA +
Preference number: 4 (lower is better)
Translates to: TFIKKQSCISRFTRLWEKSMPYL*PVNCYI
Trigger: TATATAGCAATTGACAGGTCATAAGTACGGCATGCT...TTTCTCCCATAACCTAGTGAACCTGGAAATACAACTTTGCTTCTTTATGAAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR TCA 90 bp TTTCCAAAGTCCAGCAGTAGGGTAAATCAGCTTTACAGCCTATTATACCTTAATTCCTCAAAGTCATCTTaGCCATCTGATTATTTAGCA +
Preference number: 4 (lower is better)
Translates to: FPKSSSRVNQLYSLLYLNSSKSS*PSDYLA
Trigger: TGCTAAATAATCAGATGGTCAAGATGACTTTGAGGA...ATTAAGGTATAATAGGCTGTAAAGCTGATTTACCCTACTGCTGGACTTTGGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR GCA 90 bp TTTCCAAAGTCCAGCAGTAGGGTAAATCAGCTTTACAGCCTATTATACCTTAATATCCCTGTTAACATTTaGACCATGAATCCTGAAGAA +
Preference number: 4 (lower is better)
Translates to: FPKSSSRVNQLYSLLYLNIPVNI*TMNPEE
Trigger: TTCTTCAGGATTCATGGTGCAAATGTTAACAGGGAT...ATTAAGGTATAATAGGCTGTAAAGCTGATTTACCCTACTGCTGGACTTTGGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR GCA 90 bp TGGTGTGATTTCAACTTGAATACACCTTGTACCTTCCTTATTAGATTTCATGGGATCCCTGTTAACATTTaGACCATGAATCCTGAAGAA +
Preference number: 4 (lower is better)
Translates to: WCDFNLNTPCTFLIRFHGIPVNI*TMNPEE
Trigger: TTCTTCAGGATTCATGGTGCAAATGTTAACAGGGAT...CCCATGAAATCTAATAAGGAAGGTACAAGGTGTATTCAAGTTGAAATCACACCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp GCAAGATTTACACTGATTTCCAGGAAGTCTTCCAATGACGTATGCTCTGAATTAATGAAAACGAGTTCATaGTTTTTGAAGAACTCGGTT +
Preference number: 4 (lower is better)
Translates to: ARFTLISRKSSNDVCSELMKTSS*FLKNSV
Trigger: AACCGAGTTCTTCAAAAAGCATGAACTCGTTTTCAT...TAATTCAGAGCATACGTCATTGGAAGACTTCCTGGAAATCAGTGTAAATCTTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp TTGCTTTTTCAAAACAAACTTCAGGCATCATTTAAATGCCGAGAATTCCAACTCAATATCAAGTTTCACTaGCCGATTGCCTTACAGTTC +
Preference number: 4 (lower is better)
Translates to: LLFQNKLQASFKCREFQLNIKFH*PIALQF
Trigger: GAACTGTAAGGCAATCGGGCAGTGAAACTTGATATT...GAGTTGGAATTCTCGGCATTTAAATGATGCCTGAAGTTTGTTTTGAAAAAGCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp ACTTTCATAAAGAAGCAAAGTTGTATTTCCAGGTTCACTAGGTTATGGGAGAAAGAGTATTCATGGGTTTaGTTGCTTGTTTGGTTTGTC +
Preference number: 4 (lower is better)
Translates to: TFIKKQSCISRFTRLWEKEYSWV*LLVWFV
Trigger: GACAAACCAAACAAGCAAGCAAACCCATGAATACTC...TTTCTCCCATAACCTAGTGAACCTGGAAATACAACTTTGCTTCTTTATGAAAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CCA 90 bp ATTGACATGCTGGTTACTGCATTTCTTGATATTCGAGAGGAAGTTGGTGTGATTTATTCGAGAGGAAGTTaGTGTGATTTCAACTTGAAT +
Preference number: 4 (lower is better)
Translates to: IDMLVTAFLDIREEVGVIYSRGS*CDFNLN
Trigger: ATTCAAGTTGAAATCACACCAACTTCCTCTCGAATA...AATCACACCAACTTCCTCTCGAATATCAAGAAATGCAGTAACCAGCATGTCAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp TCGGTGCAAAGCAGACTAGAAATACTGCTCATATTTATTCTCGCTGGAAAAAGTGTTCTTTCCTATACTTaGCTTGTTACTACAATTGTG +
Preference number: 4 (lower is better)
Translates to: SVQSRLEILLIFILAGKSVLSYT*LVTTIV
Trigger: CACAATTGTAGTAACAAGCCAAGTATAGGAAAGAAC...ACTTTTTCCAGCGAGAATAAATATGAGCAGTATTTCTAGTCTGCTTTGCACCGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CCA 90 bp ATTCTGTATTTCCATGTCTTTTCCACCTATGACCCCTTATTGACATGCTGGTTAGTTCTTTCCTATACTTaGCTTGTTACTACAATTGTG +
Preference number: 4 (lower is better)
Translates to: ILYFHVFSTYDPLLTCWLVLSYT*LVTTIV
Trigger: CACAATTGTAGTAACAAGCCAAGTATAGGAAAGAAC...TAACCAGCATGTCAATAAGGGGTCATAGGTGGAAAAGACATGGAAATACAGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp GTTAACGTAACTCCGCTCTCCAGAAAATCAATTAGTGCAAATCATTTGAAGCAAGACCCCAATTTTGTGTaGAATCCTTCTCATGATAAA +
Preference number: 4 (lower is better)
Translates to: VNVTPLSRKSISANHLKQDPNFV*NPSHDK
Trigger: TTTATCATGAGAAGGATTCCACACAAAATTGGGGTC...TTGCTTCAAATGATTTGCACTAATTGATTTTCTGGAGAGCGGAGTTACGTTAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp TTGCTTTTTCAAAACAAACTTCAGGCATCATTTAAATGCCGAGAATTCCAACTCTTAACATTTGCACCATaGATCCTGAAGAAACTGGTA +
Preference number: 4 (lower is better)
Translates to: LLFQNKLQASFKCREFQLLTFAP*ILKKLV
Trigger: TACCAGTTTCTTCAGGATTCATGGTGCAAATGTTAA...GAGTTGGAATTCTCGGCATTTAAATGATGCCTGAAGTTTGTTTTGAAAAAGCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp ACTTTCATAAAGAAGCAAAGTTGTATTTCCAGGTTCACTAGGTTATGGGAGAAATATACAGTGGTATCTTaGGAGCTATGTTGCAAGATT +
Preference number: 4 (lower is better)
Translates to: TFIKKQSCISRFTRLWEKYTVVS*ELCCKI
Trigger: AATCTTGCAACATAGCTCTCAAGATACCACTGTATA...TTTCTCCCATAACCTAGTGAACCTGGAAATACAACTTTGCTTCTTTATGAAAGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp ACTTTCATAAAGAAGCAAAGTTGTATTTCCAGGTTCACTAGGTTATGGGAGAAATACAGTGATAGAACATaGAAATCTGATCTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: TFIKKQSCISRFTRLWEKYSDRT*KSDLSA
Trigger: AGCTGAGAGATCAGATTTTCATGTTCTATCACTGTA...TTTCTCCCATAACCTAGTGAACCTGGAAATACAACTTTGCTTCTTTATGAAAGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR TCA 90 bp TTGCTTTTTCAAAACAAACTTCAGGCATCATTTAAATGCCGAGAATTCCAACTCATCTTTATAAGAAAGTaGCCTACAAAAGCTACCCCA +
Preference number: 4 (lower is better)
Translates to: LLFQNKLQASFKCREFQLIFIRK*PTKATP
Trigger: TGGGGTAGCTTTTGTAGGTCACTTTCTTATAAAGAT...GAGTTGGAATTCTCGGCATTTAAATGATGCCTGAAGTTTGTTTTGAAAAAGCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp AGGGTTCCTATTAAGTTAATACAATATCAAGTTTCACTGCCCGATTGCCTTACAATGAAAACGAGTTCATaGTTTTTGAAGAACTCGGTT +
Preference number: 4 (lower is better)
Translates to: RVPIKLIQYQVSLPDCLTMKTSS*FLKNSV
Trigger: AACCGAGTTCTTCAAAAAGCATGAACTCGTTTTCAT...TGTAAGGCAATCGGGCAGTGAAACTTGATATTGTATTAACTTAATAGGAACCCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR GCA 90 bp GTTAACGTAACTCCGCTCTCCAGAAAATCAATTAGTGCAAATCATTTGAAGCAAGAGTTACTGGAAGAGTaGATATTGTATAGGACAAAA +
Preference number: 4 (lower is better)
Translates to: VNVTPLSRKSISANHLKQELLEE*ILYRTK
Trigger: TTTTGTCCTATACAATATGCACTCTTCCAGTAACTC...TTGCTTCAAATGATTTGCACTAATTGATTTTCTGGAGAGCGGAGTTACGTTAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR GCA 90 bp TTGCTTTTTCAAAACAAACTTCAGGCATCATTTAAATGCCGAGAATTCCAACTCTTGCTGGCTTGTTTTTaGTATTACAAGCAATACTGC +
Preference number: 4 (lower is better)
Translates to: LLFQNKLQASFKCREFQLLLACF*YYKQYC
Trigger: GCAGTATTGCTTGTAATAGCAAAAACAAGCCAGCAA...GAGTTGGAATTCTCGGCATTTAAATGATGCCTGAAGTTTGTTTTGAAAAAGCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CCA 90 bp GTTAACGTAACTCCGCTCTCCAGAAAATCAATTAGTGCAAATCATTTGAAGCAATATTCGAGAGGAAGTTaGTGTGATTTCAACTTGAAT +
Preference number: 4 (lower is better)
Translates to: VNVTPLSRKSISANHLKQYSRGS*CDFNLN
Trigger: ATTCAAGTTGAAATCACACCAACTTCCTCTCGAATA...TTGCTTCAAATGATTTGCACTAATTGATTTTCTGGAGAGCGGAGTTACGTTAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CCA 90 bp ACTTTCATAAAGAAGCAAAGTTGTATTTCCAGGTTCACTAGGTTATGGGAGAAACCCTTATTGACATGCTaGTTACTGCATTTCTTGATA +
Preference number: 4 (lower is better)
Translates to: TFIKKQSCISRFTRLWEKPLLTC*LLHFLI
Trigger: TATCAAGAAATGCAGTAACCAGCATGTCAATAAGGG...TTTCTCCCATAACCTAGTGAACCTGGAAATACAACTTTGCTTCTTTATGAAAGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CCA 90 bp TTTCCAAAGTCCAGCAGTAGGGTAAATCAGCTTTACAGCCTATTATACCTTAATGTTCTTTCCTATACTTaGCTTGTTACTACAATTGTG +
Preference number: 4 (lower is better)
Translates to: FPKSSSRVNQLYSLLYLNVLSYT*LVTTIV
Trigger: CACAATTGTAGTAACAAGCCAAGTATAGGAAAGAAC...ATTAAGGTATAATAGGCTGTAAAGCTGATTTACCCTACTGCTGGACTTTGGAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CCA 90 bp ACTTTCATAAAGAAGCAAAGTTGTATTTCCAGGTTCACTAGGTTATGGGAGAAAGACCCCAATTTTGTGTaGAATCCTTCTCATGATAAA +
Preference number: 4 (lower is better)
Translates to: TFIKKQSCISRFTRLWEKDPNFV*NPSHDK
Trigger: TTTATCATGAGAAGGATTCCACACAAAATTGGGGTC...TTTCTCCCATAACCTAGTGAACCTGGAAATACAACTTTGCTTCTTTATGAAAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
3UTR CAA 72 bp TTCTTTTCCAAAGCTAACATCAACCTAACTCATTTATaGTCTCATAAATGTCTAGATACCTACCACGCACAA +
Preference number: 4 (lower is better)
Translates to: FFSKANINLTHL*SHKCLDTYHAQ
Trigger: TTGTGCGTGGTAGGTATCTAGACATTTATGAGACAATAAATGAGTTAGGTTGATGTTAGCTTTGGAAAAGAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR GCA 90 bp TTGCTTTTTCAAAACAAACTTCAGGCATCATTTAAATGCCGAGAATTCCAACTCCATCACATACAGATCTaGATTCTTTTTAATGGCTAC +
Preference number: 4 (lower is better)
Translates to: LLFQNKLQASFKCREFQLHHIQI*ILFNGY
Trigger: GTAGCCATTAAAAAGAATGCAGATCTGTATGTGATG...GAGTTGGAATTCTCGGCATTTAAATGATGCCTGAAGTTTGTTTTGAAAAAGCAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS GCA 90 bp TGCAGGACCTCGACTCGTGAGGCTCTCAGCGACAGCGACGGAGGCTaGTCTGCTTCCTCCCGAGTAGCAGCACCACCTGCTCCCCTTCTT +
Preference number: 5 (lower is better)
Translates to: CRTSTREALSDSDGG*SASSRVAAPPAPLL
Trigger: AAGAAGGGGAGCAGGTGGTGCTGCTACTCGGGAGGAAGCAGAGCAGCCTCCGTCGCTGTCGCTGAGAGCCTCACGAGTCGAGGTCCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000409763.1
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000465661.2
ENST00000467005.6
ENST00000477349.5
ENST00000679789.1
ENST00000679826.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
ENST00000681468.1
ENST00000681766.1
CDS GCA 90 bp AGGGCTCAGCAGCACCTGAGTCCTGCAGGCTGGCAAGGCTCCTCTTaGTATTCCACCACCCCATCTCGGGGCAGCCACAGGGCAGACACA +
Preference number: 5 (lower is better)
Translates to: RAQQHLSPAGWQGSS*YSTTPSRGSHRADT
Trigger: TGTGTCTGCCCTGTGGCTGCCCCGAGATGGGGTGGTGGAATAGCAAGAGGAGCCTTGCCAGCCTGCAGGACTCAGGTGCTGCTGAGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421730.1
CDS-3UTR CAA 90 bp TTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTAGGCTTAGGCCCAGGAGGCGGAGGTaGCGGAGAGCCGAGATCGTG +
Preference number: 5 (lower is better)
Translates to: FTKYSRCGLSQTMATRLRPRRRR*RRAEIV
Trigger: CACGATCTCGGCTCTCCGCAACCTCCGCCTCCTGGG...CCTAAGCCTAGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681079.1
CDS-3UTR CAA 90 bp GACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAACCAACAGCAGCAAGCGGAAAACCTATaGGCATCTGTCCCAGCCCCA +
Preference number: 5 (lower is better)
Translates to: DYKRKTYWHLSQPHNQQQQAENL*ASVPAP
Trigger: TGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTG...CTGCTGTTGGTTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp TCCTTAGGTCTTCCTCAACGGTCAACTGACTCAGCCTCAGCCGTGCTTTCTCTCCAAGCGGAAAACCTATaGGCATCTGTCCCAGCCCCA +
Preference number: 5 (lower is better)
Translates to: SLGLPQRSTDSASAVLSLQAENL*ASVPAP
Trigger: TGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTG...GAGAGAAAGCACGGCTGAGGCTGAGTCAGTTGACCGTTGAGGAAGACCTAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS TCA 90 bp CCCAGCTTCTGCACCACACACAGGTGTTGCTACCATGGAGCACTTTaGGCGGAAAGTGCTGGAGGTGCAAATGTTTCCTGTGGGTTGTCA +
Preference number: 5 (lower is better)
Translates to: PSFCTTHRCCYHGAL*AESAGGANVSCGLS
Trigger: TGACAACCCACAGGAAACATTTGCACCTCCAGCACTTTCCGCTCAAAGTGCTCCATGGTAGCAACACCTGTGTGTGGTGCAGAAGCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421730.1
CDS-3UTR CAA 90 bp TCCTGGGCTCGAGTGAACCTCCTGAGTAGTTGGGACTACTACTCACCACACATGAGAGAATTCCTGGAGTaGTGCCTCTGCCCCATTCTC +
Preference number: 5 (lower is better)
Translates to: SWARVNLLSSWDYYSPHMREFLE*CLCPIL
Trigger: GAGAATGGGGCAGAGGCACAACTCCAGGAATTCTCT...CATGTGTGGTGAGTAGTAGTCCCAACTACTCAGGAGGTTCACTCGAGCCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CAA 90 bp TTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTAGGCTTAGGTGCCGAGATCGTGCCATaGCACTCCAGCCTGGGCAAC +
Preference number: 5 (lower is better)
Translates to: LLNTVAAVLAKPWLLGLGAEIVP*HSSLGN
Trigger: GTTGCCCAGGCTGGAGTGCAATGGCACGATCTCGGC...ACCTAAGCCTAGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681079.1
CDS GCA 90 bp CACCACACACAGGTGTTGCTACCATGGAGCACTTTGAGCGGAAAGTaGTGGAGGTGCAAATGTTTCCTGTGGGTTGTCAAAAGAGAGGCC +
Preference number: 5 (lower is better)
Translates to: HHTQVLLPWSTLSGK*WRCKCFLWVVKREA
Trigger: GGCCTCTCTTTTGACAACCCACAGGAAACATTTGCACCTCCAGCACTTTCCGCTCAAAGTGCTCCATGGTAGCAACACCTGTGTGTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421730.1
CDS CCA 90 bp ACACATCACATATCGCAGGGCCTTTCCACCTACAGTTCCCTCTCCTaGAAGGCTCTTGCCCCTGATTCCACCCCAACTCCTAATTCGTTT +
Preference number: 5 (lower is better)
Translates to: THHISQGLSTYSSLS*KALAPDSTPTPNSF
Trigger: AAACGAATTAGGAGTTGGGGTGGAATCAGGGGCAAGAGCCTTCCAGGAGAGGGAACTGTAGGTGGAAAGGCCCTGCGATATGTGATGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467005.6
ENST00000681468.1
CDS-3UTR CAA 90 bp CTTGGAGACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAACCAAAGAGAATTCCTGGAGTaGTGCCTCTGCCCCATTCTC +
Preference number: 5 (lower is better)
Translates to: LGDYKRKTYWHLSQPHNQREFLE*CLCPIL
Trigger: GAGAATGGGGCAGAGGCACAACTCCAGGAATTCTCT...TTGGTTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTCTCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
CDS TCA 90 bp TCCGCCACTGGTGCATGGCCCATAGAGCTCATCTTCATCTTTGGATaGATACGAGTGGACCTGTCATACTCCTCAGCCCTAAGTCTTCCT +
Preference number: 5 (lower is better)
Translates to: SATGAWPIELIFIFG*IRVDLSYSSALSLP
Trigger: AGGAAGACTTAGGGCTGAGGAGTATGACAGGTCCACTCGTATTCATCCAAAGATGAAGATGAGCTCTATGGGCCATGCACCAGTGGCGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421730.1
CDS CCA 90 bp CACACACAGGTGTTGCTACCATGGAGCACTTTGAGCGGAAAGTGCTaGAGGTGCAAATGTTTCCTGTGGGTTGTCAAAAGAGAGGCCAGT +
Preference number: 5 (lower is better)
Translates to: HTQVLLPWSTLSGKC*RCKCFLWVVKREAS
Trigger: ACTGGCCTCTCTTTTGACAACCCACAGGAAACATTTGCACCTCCAGCACTTTCCGCTCAAAGTGCTCCATGGTAGCAACACCTGTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421730.1
CDS CCA 90 bp TACGGAAAAGTTGGAGAACACTACTATTCAGGAACCAGCAGCTACTaGTACCGGACCTCTCCACTCTCTGGACTCCCGACTCCTAGAACT +
Preference number: 5 (lower is better)
Translates to: YGKVGEHYYSGTSSY*YRTSPLSGLPTPRT
Trigger: AGTTCTAGGAGTCGGGAGTCCAGAGAGTGGAGAGGTCCGGTACCAGTAGCTGCTGGTTCCTGAATAGTAGTGTTCTCCAACTTTTCCGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467005.6
ENST00000681468.1
CDS-3UTR CAA 90 bp CTTGGAGACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAACCAATGTCAGCATCTCCCTTaGAGGATGAGGTCCACTGTA +
Preference number: 5 (lower is better)
Translates to: LGDYKRKTYWHLSQPHNQCQHLP*RMRSTV
Trigger: TACAGTGGACCTCATCCTCAAAGGGAGATGCTGACA...TTGGTTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTCTCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp GCCCCACAACCAACAGCAGATGACGGGTTATGTGGGACTGTGACACCACTGACTACCTATGACCCCTTATaGACATGCTGGTTACTGCAT +
Preference number: 5 (lower is better)
Translates to: APQPTADDGLCGTVTPLTTYDPL*TCWLLH
Trigger: ATGCAGTAACCAGCATGTCAATAAGGGGTCATAGGT...AGTCAGTGGTGTCACAGTCCCACATAACCCGTCATCTGCTGTTGGTTGTGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp TCCCATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAACAAGCGGAAAACCTATaGGCATCTGTCCCAGCCCCA +
Preference number: 5 (lower is better)
Translates to: SHTCRLPLTLKAKHTAIKQAENL*ASVPAP
Trigger: TGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTG...TTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CAA 90 bp CTGTTTTCAGATTGGCTTCCTGACCAGGAGCTAGAGAATTCCTGGAGTTGTGCCAGAGAATTCCTGGAGTaGTGCCTCTGCCCCATTCTC +
Preference number: 5 (lower is better)
Translates to: LFSDWLPDQELENSWSCAREFLE*CLCPIL
Trigger: GAGAATGGGGCAGAGGCACAACTCCAGGAATTCTCT...GGCACAACTCCAGGAATTCTCTAGCTCCTGGTCAGGAAGCCAATCTGAAAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CAA 90 bp TCCTGGGCTCGAGTGAACCTCCTGAGTAGTTGGGACTACTACTCACCACACATGAAGGCCCTGTTCTTTTaGTTTCTCCAGTCCTGTGTG +
Preference number: 5 (lower is better)
Translates to: SWARVNLLSSWDYYSPHMKALFF*FLQSCV
Trigger: CACACAGGACTGGAGAAACAAAAAGAACAGGGCCTT...CATGTGTGGTGAGTAGTAGTCCCAACTACTCAGGAGGTTCACTCGAGCCCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CAA 90 bp GTCACAGTGAAAAAGAGCCAAGAACTGGACAGCTCCTTAGGTCTTCCTCAACGGTGTCAGCATCTCCCTTaGAGGATGAGGTCCACTGTA +
Preference number: 5 (lower is better)
Translates to: VTVKKSQELDSSLGLPQRCQHLP*RMRSTV
Trigger: TACAGTGGACCTCATCCTCAAAGGGAGATGCTGACA...CCGTTGAGGAAGACCTAAGGAGCTGTCCAGTTCTTGGCTCTTTTTCACTGTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp AACAGTTCCCATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCTGTCAGCATCTCCCTTaGAGGATGAGGTCCACTGTA +
Preference number: 5 (lower is better)
Translates to: NSSHTCRLPLTLKAKHTACQHLP*RMRSTV
Trigger: TACAGTGGACCTCATCCTCAAAGGGAGATGCTGACA...GGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATGGGAACTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CAA 90 bp CTTGGAGACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAACCAAATCTCTGGCAAGCCTTaGCTCTCAGTTCTAGGATCT +
Preference number: 5 (lower is better)
Translates to: LGDYKRKTYWHLSQPHNQISGKP*LSVLGS
Trigger: AGATCCTAGAACTGAGAGCAAAGGCTTGCCAGAGAT...TTGGTTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTCTCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409923.5
ENST00000440481.6
CDS-3UTR CAA 90 bp GTCACAGTGAAAAAGAGCCAAGAACTGGACAGCTCCTTAGGTCTTCCTCAACGGACATGCAGACTCCCTTaGACTCTGAAGGCCAAACAC +
Preference number: 5 (lower is better)
Translates to: VTVKKSQELDSSLGLPQRTCRLP*TLKAKH
Trigger: GTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGT...CCGTTGAGGAAGACCTAAGGAGCTGTCCAGTTCTTGGCTCTTTTTCACTGTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp AACCGCTGTGCAGTCACAGTGAAAAAGAGCCAAGAACTGGACAGCTCCTTAGGTACATGCAGACTCCCTTaGACTCTGAAGGCCAAACAC +
Preference number: 5 (lower is better)
Translates to: NRCAVTVKKSQELDSSLGTCRLP*TLKAKH
Trigger: GTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGT...ACCTAAGGAGCTGTCCAGTTCTTGGCTCTTTTTCACTGTGACTGCACAGCGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp GGGCTCCTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAAGAAGCAAGAGAATTCCTGGAGTaGTGCCTCTGCCCCATTCTC +
Preference number: 5 (lower is better)
Translates to: GLLSGIRMKDPGYFHKEAREFLE*CLCPIL
Trigger: GAGAATGGGGCAGAGGCACAACTCCAGGAATTCTCT...TGCTTCTTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAGGAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CAA 90 bp TCCTTAGGTCTTCCTCAACGGTCAACTGACTCAGCCTCAGCCGTGCTTTCTCTCACCTGGGCAAACAGCTaGTTTCTCAAACAACAGTTG +
Preference number: 5 (lower is better)
Translates to: SLGLPQRSTDSASAVLSLTWANS*FLKQQL
Trigger: CAACTGTTGTTTGAGAAACAAGCTGTTTGCCCAGGT...GAGAGAAAGCACGGCTGAGGCTGAGTCAGTTGACCGTTGAGGAAGACCTAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CAA 90 bp TCCTGGGCTCGAGTGAACCTCCTGAGTAGTTGGGACTACTACTCACCACACATGCAGTGTCAATACAGCTaGGATAAGACTGTAGCCCAT +
Preference number: 5 (lower is better)
Translates to: SWARVNLLSSWDYYSPHMQCQYS*DKTVAH
Trigger: ATGGGCTACAGTCTTATCCAAGCTGTATTGACACTG...CATGTGTGGTGAGTAGTAGTCCCAACTACTCAGGAGGTTCACTCGAGCCCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS TCA 90 bp TCAGTTCTAGGATCTGTGGCTGTTTCCTGCACACCCTGTATATGCTaGGCATCAATCTCTCCTAGTGTTCTGCCTTTTTCCCCATTCCCG +
Preference number: 5 (lower is better)
Translates to: SVLGSVAVSCTPCIC*ASISPSVLPFSPFP
Trigger: CGGGAATGGGGAAAAAGGCAGAACACTAGGAGAGATTGATGCTCAGCATATACAGGGTGTGCAGGAAACAGCCACAGATCCTAGAACTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000498833.1
CDS-3UTR CAA 90 bp GCCCCACAACCAACAGCAGATGACGGGTTATGTGGGACTGTGACACCACTGACTTGGTTACTGCATTTCTaGATATTCGAGAGGAAGTTG +
Preference number: 5 (lower is better)
Translates to: APQPTADDGLCGTVTPLTWLLHF*IFERKL
Trigger: CAACTTCCTCTCGAATATCAAGAAATGCAGTAACCA...AGTCAGTGGTGTCACAGTCCCACATAACCCGTCATCTGCTGTTGGTTGTGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp CTTCTTGGAGACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAACAATTGTGACTACTGTTaGATAAACCCGACTGGCTGG +
Preference number: 5 (lower is better)
Translates to: LLGDYKRKTYWHLSQPHNNCDYC*INPTGW
Trigger: CCAGCCAGTCGGGTTTATCAAACAGTAGTCACAATT...GTTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTCTCCAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp AGCAGGAACAAGAGGAAAACACTAGCATGCTCTCTTGGTGACTACAGCAAGGGAACATGCAGACTCCCTTaGACTCTGAAGGCCAAACAC +
Preference number: 5 (lower is better)
Translates to: SRNKRKTLACSLGDYSKGTCRLP*TLKAKH
Trigger: GTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGT...TCCCTTGCTGTAGTCACCAAGAGAGCATGCTAGTGTTTTCCTCTTGTTCCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp ACAGCAGATGACGGGTTATGTGGGACTGTGACACCACTGACTTGTTCAAAGGATACATGCAGACTCCCTTaGACTCTGAAGGCCAAACAC +
Preference number: 5 (lower is better)
Translates to: TADDGLCGTVTPLTCSKDTCRLP*TLKAKH
Trigger: GTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGT...ATCCTTTGAACAAGTCAGTGGTGTCACAGTCCCACATAACCCGTCATCTGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp ACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAAATAGGAAGAGAATTCCTGGAGTaGTGCCTCTGCCCCATTCTC +
Preference number: 5 (lower is better)
Translates to: TCRLPLTLKAKHTAIKIGREFLE*CLCPIL
Trigger: GAGAATGGGGCAGAGGCACAACTCCAGGAATTCTCT...TCCTATTTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CAA 90 bp TCCTTAGGTCTTCCTCAACGGTCAACTGACTCAGCCTCAGCCGTGCTTTCTCTCCAGAGTATAAATGCTTaGGCAGCCTTCAAAGCATAC +
Preference number: 5 (lower is better)
Translates to: SLGLPQRSTDSASAVLSLQSINA*AAFKAY
Trigger: GTATGCTTTGAAGGCTGCCAAAGCATTTATACTCTG...GAGAGAAAGCACGGCTGAGGCTGAGTCAGTTGACCGTTGAGGAAGACCTAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp GACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAACCAACAGCAGCAGAGTATAAATGCTTaGGCAGCCTTCAAAGCATAC +
Preference number: 5 (lower is better)
Translates to: DYKRKTYWHLSQPHNQQQQSINA*AAFKAY
Trigger: GTATGCTTTGAAGGCTGCCAAAGCATTTATACTCTG...CTGCTGTTGGTTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440481.6
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp TCCTTAGGTCTTCCTCAACGGTCAACTGACTCAGCCTCAGCCGTGCTTTCTCTCTCTTTAGACCACACTTaGAGAAACAATGCTCTCCTC +
Preference number: 5 (lower is better)
Translates to: SLGLPQRSTDSASAVLSLSLDHT*RNNALL
Trigger: GAGGAGAGCATTGTTTCTCAAAGTGTGGTCTAAAGA...GAGAGAAAGCACGGCTGAGGCTGAGTCAGTTGACCGTTGAGGAAGACCTAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CAA 90 bp TCCTGGGCTCGAGTGAACCTCCTGAGTAGTTGGGACTACTACTCACCACACATGAGCAAGAATTCAGTGTaGAAGTTAGGCCTTTCCTAC +
Preference number: 5 (lower is better)
Translates to: SWARVNLLSSWDYYSPHMSKNSV*KLGLSY
Trigger: GTAGGAAAGGCCTAACTTCAACACTGAATTCTTGCT...CATGTGTGGTGAGTAGTAGTCCCAACTACTCAGGAGGTTCACTCGAGCCCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS TCA 90 bp GAGGACACATCCCAGCTTCACCTAAATTTGCCTGTGCTTCTGATATaGCAAATAATCCGCCACTGGTGCATGGCCCATAGAGCTCATCTT +
Preference number: 5 (lower is better)
Translates to: EDTSQLHLNLPVLLI*QIIRHWCMAHRAHL
Trigger: AAGATGAGCTCTATGGGCCATGCACCAGTGGCGGATTATTTGTCATATCAGAAGCACAGGCAAATTTAGGTGAAGCTGGGATGTGTCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421730.1
CDS GCA 90 bp CCCCTAGAAGAAGAGCTTCAATGCATCCACTGCTATGCACATTTCTaGTGGCTGAGACTGCAAGGTAGCACCAAATTAGTTCTGGGAGAA +
Preference number: 5 (lower is better)
Translates to: PLEEELQCIHCYAHF*WLRLQGSTKLVLGE
Trigger: TTCTCCCAGAACTAATTTGGTGCTACCTTGCAGTCTCAGCCAGCAGAAATGTGCATAGCAGTGGATGCATTGAAGCTCTTCTTCTAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000409763.1
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000465661.2
ENST00000477349.5
ENST00000679789.1
ENST00000679826.1
ENST00000681079.1
ENST00000681402.1
ENST00000681766.1
CDS GCA 90 bp CTGGGAAAGGCACTAGCCGGGCTAAACTATTTGCCATTCTTTAAATaGCTTGCATTTTCTGAGCCTCCGTATACTATCCCCACTGCATGG +
Preference number: 5 (lower is better)
Translates to: LGKALAGLNYLPFFK*LAFSEPPYTIPTAW
Trigger: CCATGCAGTGGGGATAGTATACGGAGGCTCAGAAAATGCAAGGCATTTAAAGAATGGCAAATAGTTTAGCCCGGCTAGTGCCTTTCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467005.6
CDS-3UTR CAA 90 bp TCTGAGCTCTGCATAAGCAGGAACAAGAGGAAAACACTAGCATGCTCTCTTGGTTGTCAGCATCTCCCTTaGAGGATGAGGTCCACTGTA +
Preference number: 5 (lower is better)
Translates to: SELCISRNKRKTLACSLGCQHLP*RMRSTV
Trigger: TACAGTGGACCTCATCCTCAAAGGGAGATGCTGACA...ACCAAGAGAGCATGCTAGTGTTTTCCTCTTGTTCCTGCTTATGCAGAGCTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp CTTTTCCTCCAGTTTTGCTTCCTCCTGACCGTCTGTGGTTCTTTCCTATACTTGTGTCAGCATCTCCCTTaGAGGATGAGGTCCACTGTA +
Preference number: 5 (lower is better)
Translates to: LFLQFCFLLTVCGSFLYLCQHLP*RMRSTV
Trigger: TACAGTGGACCTCATCCTCAAAGGGAGATGCTGACA...CAAGTATAGGAAAGAACCACAGACGGTCAGGAGGAAGCAAAACTGGAGGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp ATTCTGTGCTGTCAGCATCTCCCTTTGAGGATGAGGTCCACTGTATACCACTTTTGTCAGCATCTCCCTTaGAGGATGAGGTCCACTGTA +
Preference number: 5 (lower is better)
Translates to: ILCCQHLPLRMRSTVYHFCQHLP*RMRSTV
Trigger: TACAGTGGACCTCATCCTCAAAGGGAGATGCTGACA...AAAGTGGTATACAGTGGACCTCATCCTCAAAGGGAGATGCTGACAGCACAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp ACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAAATAGGATGTCAGCATCTCCCTTaGAGGATGAGGTCCACTGTA +
Preference number: 5 (lower is better)
Translates to: TCRLPLTLKAKHTAIKIGCQHLP*RMRSTV
Trigger: TACAGTGGACCTCATCCTCAAAGGGAGATGCTGACA...TCCTATTTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CAA 90 bp GCCCCACAACCAACAGCAGATGACGGGTTATGTGGGACTGTGACACCACTGACTCACAAACACAGATTCTaGAACAAATTTGACACAGTG +
Preference number: 5 (lower is better)
Translates to: APQPTADDGLCGTVTPLTHKHRF*NKFDTV
Trigger: CACTGTGTCAAATTTGTTCAAGAATCTGTGTTTGTG...AGTCAGTGGTGTCACAGTCCCACATAACCCGTCATCTGCTGTTGGTTGTGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp GACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAACCAACAGCAGTGGTTACTGCATTTCTaGATATTCGAGAGGAAGTTG +
Preference number: 5 (lower is better)
Translates to: DYKRKTYWHLSQPHNQQQWLLHF*IFERKL
Trigger: CAACTTCCTCTCGAATATCAAGAAATGCAGTAACCA...CTGCTGTTGGTTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp CTGTTTTCAGATTGGCTTCCTGACCAGGAGCTAGAGAATTCCTGGAGTTGTGCCACCTATGACCCCTTATaGACATGCTGGTTACTGCAT +
Preference number: 5 (lower is better)
Translates to: LFSDWLPDQELENSWSCATYDPL*TCWLLH
Trigger: ATGCAGTAACCAGCATGTCAATAAGGGGTCATAGGT...GGCACAACTCCAGGAATTCTCTAGCTCCTGGTCAGGAAGCCAATCTGAAAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CAA 90 bp TTCCTCCAGTTTTGCTTCCTCCTGACCGTCTGTGGTTCTTTCCTATACTTGGCTATCTCTGGCAAGCCTTaGCTCTCAGTTCTAGGATCT +
Preference number: 5 (lower is better)
Translates to: FLQFCFLLTVCGSFLYLAISGKP*LSVLGS
Trigger: AGATCCTAGAACTGAGAGCAAAGGCTTGCCAGAGAT...AGCCAAGTATAGGAAAGAACCACAGACGGTCAGGAGGAAGCAAAACTGGAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409923.5
ENST00000440481.6
CDS-3UTR CAA 90 bp GACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAACCAACAGCAGTTTTCTTACAGATTTTaGCCTCCTGATCTCTGGCAA +
Preference number: 5 (lower is better)
Translates to: DYKRKTYWHLSQPHNQQQFSYRF*PPDLWQ
Trigger: TTGCCAGAGATCAGGAGGCAAAAATCTGTAAGAAAA...CTGCTGTTGGTTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000409923.5
ENST00000440481.6
CDS-3UTR CAA 90 bp GTCACAGTGAAAAAGAGCCAAGAACTGGACAGCTCCTTAGGTCTTCCTCAACGGTTGGGCTCTCTGAGTTaGTTTTCGAGCAAAGTGATC +
Preference number: 5 (lower is better)
Translates to: VTVKKSQELDSSLGLPQRLGSLS*FSSKVI
Trigger: GATCACTTTGCTCGAAAACAAACTCAGAGAGCCCAA...CCGTTGAGGAAGACCTAAGGAGCTGTCCAGTTCTTGGCTCTTTTTCACTGTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp TCAGGGGAGCCTTCAGAATTTAAGACATCAGGGCTCCTGTCAGGAATACGGATGTTGGGCTCTCTGAGTTaGTTTTCGAGCAAAGTGATC +
Preference number: 5 (lower is better)
Translates to: SGEPSEFKTSGLLSGIRMLGSLS*FSSKVI
Trigger: GATCACTTTGCTCGAAAACAAACTCAGAGAGCCCAA...CATCCGTATTCCTGACAGGAGCCCTGATGTCTTAAATTCTGAAGGCTCCCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CAA 90 bp GCCCCACAACCAACAGCAGATGACGGGTTATGTGGGACTGTGACACCACTGACTTGTGACACCACTGACTaGTTCAAAGGATTTACTAAA +
Preference number: 5 (lower is better)
Translates to: APQPTADDGLCGTVTPLTCDTTD*FKGFTK
Trigger: TTTAGTAAATCCTTTGAACAAGTCAGTGGTGTCACA...AGTCAGTGGTGTCACAGTCCCACATAACCCGTCATCTGCTGTTGGTTGTGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp AAGAGAGAAGCTCAAGATTCTCACTTTGGGCTCTCTGAGTTTGTTTTCGAGCAACAAGCGGAAAACCTATaGGCATCTGTCCCAGCCCCA +
Preference number: 5 (lower is better)
Translates to: KREAQDSHFGLSEFVFEQQAENL*ASVPAP
Trigger: TGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTG...TTGCTCGAAAACAAACTCAGAGAGCCCAAAGTGAGAATCTTGAGCTTCTCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp ATGTGGGACTGTGACACCACTGACTTGTTCAAAGGATTTACTAAATACAGTCGCCAAGCGGAAAACCTATaGGCATCTGTCCCAGCCCCA +
Preference number: 5 (lower is better)
Translates to: MWDCDTTDLFKGFTKYSRQAENL*ASVPAP
Trigger: TGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTG...GCGACTGTATTTAGTAAATCCTTTGAACAAGTCAGTGGTGTCACAGTCCCACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp GCCCCACAACCAACAGCAGATGACGGGTTATGTGGGACTGTGACACCACTGACTACCTGTCAAAATTTATaGTCACTGACAATCTTAGGG +
Preference number: 5 (lower is better)
Translates to: APQPTADDGLCGTVTPLTTCQNL*SLTILG
Trigger: CCCTAAGATTGTCAGTGACAATAAATTTTGACAGGT...AGTCAGTGGTGTCACAGTCCCACATAACCCGTCATCTGCTGTTGGTTGTGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp CATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAAATAAGAGAATTCCTGGAGTaGTGCCTCTGCCCCATTCTC +
Preference number: 5 (lower is better)
Translates to: HTCRLPLTLKAKHTAIKIREFLE*CLCPIL
Trigger: GAGAATGGGGCAGAGGCACAACTCCAGGAATTCTCT...TATTTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CAA 90 bp ATAAAACAGTTCCCATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACGCCCTCTTTTATGACTaGGCAGGCACTGGCATTCAG +
Preference number: 5 (lower is better)
Translates to: IKQFPYMQTPFDSEGQTHALFYD*AGTGIQ
Trigger: CTGAATGCCAGTGCCTGCCAAGTCATAAAAGAGGGC...GTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATGGGAACTGTTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CAA 90 bp ACATCAGGGCTCCTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAATATGGTGGAGCTTTTTaGGGTCCCAGCCCAAAGCAT +
Preference number: 5 (lower is better)
Translates to: TSGLLSGIRMKDPGYFHKYGGAF*GPSPKH
Trigger: ATGCTTTGGGCTGGGACCCAAAAAAGCTCCACCATA...TTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAGGAGCCCTGATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CAA 90 bp TCAGGGCTCCTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAAGAAAACAGGTGTGAAATGTaGTCTGCCAGGGATGCTCGT +
Preference number: 5 (lower is better)
Translates to: SGLLSGIRMKDPGYFHKENRCEM*SARDAR
Trigger: ACGAGCATCCCTGGCAGACAACATTTCACACCTGTT...TTCTTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAGGAGCCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CAA 90 bp TCCTTAGGTCTTCCTCAACGGTCAACTGACTCAGCCTCAGCCGTGCTTTCTCTCTGGTATACAGATGGTTaGGATAAAGATGGAATCGTA +
Preference number: 5 (lower is better)
Translates to: SLGLPQRSTDSASAVLSLWYTDG*DKDGIV
Trigger: TACGATTCCATCTTTATCCAAACCATCTGTATACCA...GAGAGAAAGCACGGCTGAGGCTGAGTCAGTTGACCGTTGAGGAAGACCTAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp TCCTGGGCTCGAGTGAACCTCCTGAGTAGTTGGGACTACTACTCACCACACATGCACAAACACAGATTCTaGAACAAATTTGACACAGTG +
Preference number: 5 (lower is better)
Translates to: SWARVNLLSSWDYYSPHMHKHRF*NKFDTV
Trigger: CACTGTGTCAAATTTGTTCAAGAATCTGTGTTTGTG...CATGTGTGGTGAGTAGTAGTCCCAACTACTCAGGAGGTTCACTCGAGCCCAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CAA 90 bp TCTTGGAGACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAACCATGGTTACTGCATTTCTaGATATTCGAGAGGAAGTTG +
Preference number: 5 (lower is better)
Translates to: SWRLQAENLLASVPAPQPWLLHF*IFERKL
Trigger: CAACTTCCTCTCGAATATCAAGAAATGCAGTAACCA...TGGTTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTCTCCAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp ACAGCAGATGACGGGTTATGTGGGACTGTGACACCACTGACTTGTTCAAAGGATACCTATGACCCCTTATaGACATGCTGGTTACTGCAT +
Preference number: 5 (lower is better)
Translates to: TADDGLCGTVTPLTCSKDTYDPL*TCWLLH
Trigger: ATGCAGTAACCAGCATGTCAATAAGGGGTCATAGGT...ATCCTTTGAACAAGTCAGTGGTGTCACAGTCCCACATAACCCGTCATCTGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp GGGCTCCTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAAGAAGCAAATTGTGACTACTGTTaGATAAACCCGACTGGCTGG +
Preference number: 5 (lower is better)
Translates to: GLLSGIRMKDPGYFHKEANCDYC*INPTGW
Trigger: CCAGCCAGTCGGGTTTATCAAACAGTAGTCACAATT...TGCTTCTTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAGGAGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CAA 90 bp GACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAACCAACAGCAGGGTTCTTTCCTATACTaGGCTTGTTACTACAATTGT +
Preference number: 5 (lower is better)
Translates to: DYKRKTYWHLSQPHNQQQGSFLY*ACYYNC
Trigger: ACAATTGTAGTAACAAGCCAAGTATAGGAAAGAACC...CTGCTGTTGGTTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp CCAGGAGCTAGAGAATTCCTGGAGTTGTGCCTCTGCCCCATTCTCTATAAAACATTGGGCTCTCTGAGTTaGTTTTCGAGCAAAGTGATC +
Preference number: 5 (lower is better)
Translates to: PGAREFLELCLCPILYKTLGSLS*FSSKVI
Trigger: GATCACTTTGCTCGAAAACAAACTCAGAGAGCCCAA...TGTTTTATAGAGAATGGGGCAGAGGCACAACTCCAGGAATTCTCTAGCTCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CAA 90 bp TCCCATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAATTGGGCTCTCTGAGTTaGTTTTCGAGCAAAGTGATC +
Preference number: 5 (lower is better)
Translates to: SHTCRLPLTLKAKHTAIKLGSLS*FSSKVI
Trigger: GATCACTTTGCTCGAAAACAAACTCAGAGAGCCCAA...TTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CAA 90 bp GACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAACCAACAGCAGTCATACACATCATTTTaGTGTTTCCACATGCCTGTT +
Preference number: 5 (lower is better)
Translates to: DYKRKTYWHLSQPHNQQQSYTSF*CFHMPV
Trigger: AACAGGCATGTGGAAACACAAAAATGATGTGTATGA...CTGCTGTTGGTTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp TCCCATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAATGCAAGACCCCAATTTaGTGTGGAATCCTTCTCATG +
Preference number: 5 (lower is better)
Translates to: SHTCRLPLTLKAKHTAIKCKTPI*CGILLM
Trigger: CATGAGAAGGATTCCACACAAAATTGGGGTCTTGCA...TTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp AACCGCTGTGCAGTCACAGTGAAAAAGAGCCAAGAACTGGACAGCTCCTTAGGTTTGCCCATAAACTGTTaGAACAAAGGCTGGAATACC +
Preference number: 5 (lower is better)
Translates to: NRCAVTVKKSQELDSSLGLPINC*NKGWNT
Trigger: GGTATTCCAGCCTTTGTTCAAACAGTTTATGGGCAA...ACCTAAGGAGCTGTCCAGTTCTTGGCTCTTTTTCACTGTGACTGCACAGCGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CAA 90 bp ACATCAGGGCTCCTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAAGATTCCAAGAATCCTTaGCCTGTGGAATCACACAGG +
Preference number: 5 (lower is better)
Translates to: TSGLLSGIRMKDPGYFHKDSKNP*PVESHR
Trigger: CCTGTGTGATTCCACAGGCAAAGGATTCTTGGAATC...TTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAGGAGCCCTGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CAA 90 bp TTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTAGGCTTAGGTTCCTCTCCACTCACTTaGTGGCTCCTGGATAACTTT +
Preference number: 5 (lower is better)
Translates to: LLNTVAAVLAKPWLLGLGSSPLT*WLLDNF
Trigger: AAAGTTATCCAGGAGCCACAAAGTGAGTGGAGAGGA...ACCTAAGCCTAGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681402.1
CDS CCA 90 bp TCCATCCTCCATCATTTTTCTTACAGATTTTTGCCTCCTGATCTCTaGCAAGCCTTTGCTCTCAGTTCTAGGATCTGTGGCTGTTTCCTG +
Preference number: 5 (lower is better)
Translates to: SILHHFSYRFLPPDL*QAFALSSRICGCFL
Trigger: CAGGAAACAGCCACAGATCCTAGAACTGAGAGCAAAGGCTTGCCAGAGATCAGGAGGCAAAAATCTGTAAGAAAAATGATGGAGGATGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409923.5
ENST00000440481.6
CDS-3UTR CAA 90 bp CCTTCAGAATTTAAGACATCAGGGCTCCTGTCAGGAATACGGATGAAAGACCCAAAATTGCAGCGTAAATaGAAGCAACTGCTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: PSEFKTSGLLSGIRMKDPKLQRK*KQLLLS
Trigger: GGAGAGGAGCAGTTGCTTCAATTTACGCTGCAATTT...TGGGTCTTTCATCCGTATTCCTGACAGGAGCCCTGATGTCTTAAATTCTGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CAA 90 bp ACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAAATAGGAAAATTGCAGCGTAAATaGAAGCAACTGCTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: TCRLPLTLKAKHTAIKIGKLQRK*KQLLLS
Trigger: GGAGAGGAGCAGTTGCTTCAATTTACGCTGCAATTT...TCCTATTTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CAA 90 bp CTCCAGTTTTGCTTCCTCCTGACCGTCTGTGGTTCTTTCCTATACTTGGCTTGTCACTGTATACCACTTTaGACAAACCATGCTGGGATA +
Preference number: 5 (lower is better)
Translates to: LQFCFLLTVCGSFLYLACHCIPL*TNHAGI
Trigger: TATCCCAGCATGGTTTGTCAAAAGTGGTATACAGTG...ACAAGCCAAGTATAGGAAAGAACCACAGACGGTCAGGAGGAAGCAAAACTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp GGGCTCCTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAAGAAGCACACTGTATACCACTTTaGACAAACCATGCTGGGATA +
Preference number: 5 (lower is better)
Translates to: GLLSGIRMKDPGYFHKEAHCIPL*TNHAGI
Trigger: TATCCCAGCATGGTTTGTCAAAAGTGGTATACAGTG...TGCTTCTTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAGGAGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CAA 90 bp CCTGGAATAAAATCCCTCGTCAACTTCAGATATCTCCATCAGTTCTTCTTGACCTGTCAGCATCTCCCTTaGAGGATGAGGTCCACTGTA +
Preference number: 5 (lower is better)
Translates to: PGIKSLVNFRYLHQFFLTCQHLP*RMRSTV
Trigger: TACAGTGGACCTCATCCTCAAAGGGAGATGCTGACA...GGTCAAGAAGAACTGATGGAGATATCTGAAGTTGACGAGGGATTTTATTCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp CTTGGAGACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAACCAACACAAACACAGATTCTaGAACAAATTTGACACAGTG +
Preference number: 5 (lower is better)
Translates to: LGDYKRKTYWHLSQPHNQHKHRF*NKFDTV
Trigger: CACTGTGTCAAATTTGTTCAAGAATCTGTGTTTGTG...TTGGTTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTCTCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp AACAGTTCCCATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCTGGTGTGATTTCAACTaGAATACACCTTGTACCTTC +
Preference number: 5 (lower is better)
Translates to: NSSHTCRLPLTLKAKHTAWCDFN*NTPCTF
Trigger: GAAGGTACAAGGTGTATTCAAGTTGAAATCACACCA...GGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATGGGAACTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CAA 90 bp GGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTAGGCTTAATTGTGACTACTGTTaGATAAACCCGACTGGCTGG +
Preference number: 5 (lower is better)
Translates to: GFTKYSRCGLSQTMATRLNCDYC*INPTGW
Trigger: CCAGCCAGTCGGGTTTATCAAACAGTAGTCACAATT...AAGCCTAGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp TCAGGGCTCCTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAAGAAAATTGTGACTACTGTTaGATAAACCCGACTGGCTGG +
Preference number: 5 (lower is better)
Translates to: SGLLSGIRMKDPGYFHKENCDYC*INPTGW
Trigger: CCAGCCAGTCGGGTTTATCAAACAGTAGTCACAATT...TTCTTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAGGAGCCCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CAA 90 bp AAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTAGGCAATTGTGACTACTGTTaGATAAACCCGACTGGCTGG +
Preference number: 5 (lower is better)
Translates to: KDLLNTVAAVLAKPWLLGNCDYC*INPTGW
Trigger: CCAGCCAGTCGGGTTTATCAAACAGTAGTCACAATT...GCCTAGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp CTTCTTGGAGACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAACGGTTCTTTCCTATACTaGGCTTGTTACTACAATTGT +
Preference number: 5 (lower is better)
Translates to: LLGDYKRKTYWHLSQPHNGSFLY*ACYYNC
Trigger: ACAATTGTAGTAACAAGCCAAGTATAGGAAAGAACC...GTTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTCTCCAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp CCTTCAGAATTTAAGACATCAGGGCTCCTGTCAGGAATACGGATGAAAGACCCATTGGGCTCTCTGAGTTaGTTTTCGAGCAAAGTGATC +
Preference number: 5 (lower is better)
Translates to: PSEFKTSGLLSGIRMKDPLGSLS*FSSKVI
Trigger: GATCACTTTGCTCGAAAACAAACTCAGAGAGCCCAA...TGGGTCTTTCATCCGTATTCCTGACAGGAGCCCTGATGTCTTAAATTCTGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CAA 90 bp GTGAGACCACTGGGAATTCTACATATTAGACGAGTAATTTGTTTGCACTCTGATCAAGCGGAAAACCTATaGGCATCTGTCCCAGCCCCA +
Preference number: 5 (lower is better)
Translates to: VRPLGILHIRRVICLHSDQAENL*ASVPAP
Trigger: TGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTG...ATCAGAGTGCAAACAAATTACTCGTCTAATATGTAGAATTCCCAGTGGTCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp TCAGGGGAGCCTTCAGAATTTAAGACATCAGGGCTCCTGTCAGGAATACGGATGCTGATTGATGCTTCATaGGAAGTTCAGTTCTTTCTG +
Preference number: 5 (lower is better)
Translates to: SGEPSEFKTSGLLSGIRMLIDAS*EVQFFL
Trigger: CAGAAAGAACTGAACTTCCAATGAAGCATCAATCAG...CATCCGTATTCCTGACAGGAGCCCTGATGTCTTAAATTCTGAAGGCTCCCCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CAA 90 bp AAGAGAGAAGCTCAAGATTCTCACTTTGGGCTCTCTGAGTTTGTTTTCGAGCAAACATGCAGACTCCCTTaGACTCTGAAGGCCAAACAC +
Preference number: 5 (lower is better)
Translates to: KREAQDSHFGLSEFVFEQTCRLP*TLKAKH
Trigger: GTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGT...TTGCTCGAAAACAAACTCAGAGAGCCCAAAGTGAGAATCTTGAGCTTCTCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp AGCAGGAACAAGAGGAAAACACTAGCATGCTCTCTTGGTGACTACAGCAAGGGACAGAGTATAAATGCTTaGGCAGCCTTCAAAGCATAC +
Preference number: 5 (lower is better)
Translates to: SRNKRKTLACSLGDYSKGQSINA*AAFKAY
Trigger: GTATGCTTTGAAGGCTGCCAAAGCATTTATACTCTG...TCCCTTGCTGTAGTCACCAAGAGAGCATGCTAGTGTTTTCCTCTTGTTCCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp TCAGGGGAGCCTTCAGAATTTAAGACATCAGGGCTCCTGTCAGGAATACGGATGTATTCATGGGTTTGCTaGCTTGTTTGGTTTGTCCTT +
Preference number: 5 (lower is better)
Translates to: SGEPSEFKTSGLLSGIRMYSWVC*LVWFVL
Trigger: AAGGACAAACCAAACAAGCAAGCAAACCCATGAATA...CATCCGTATTCCTGACAGGAGCCCTGATGTCTTAAATTCTGAAGGCTCCCCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS CCA 90 bp CTAGAAGAAGAGCTTCAATGCATCCACTGCTATGCACATTTCTGCTaGCTGAGACTGCAAGGTAGCACCAAATTAGTTCTGGGAGAAATT +
Preference number: 5 (lower is better)
Translates to: LEEELQCIHCYAHFC*LRLQGSTKLVLGEI
Trigger: AATTTCTCCCAGAACTAATTTGGTGCTACCTTGCAGTCTCAGCCAGCAGAAATGTGCATAGCAGTGGATGCATTGAAGCTCTTCTTCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000409763.1
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000465661.2
ENST00000477349.5
ENST00000679789.1
ENST00000679826.1
ENST00000681079.1
ENST00000681402.1
ENST00000681766.1
CDS CCA 90 bp CTTGACCTGTTAATTCTGTATTTCAGATTTTTGCCTCCTGATCTCTaGCAAGCCTTTGCTCTCAGTTCTAGGATCTGTGGCTGTTTCCTG +
Preference number: 5 (lower is better)
Translates to: LDLLILYFRFLPPDL*QAFALSSRICGCFL
Trigger: CAGGAAACAGCCACAGATCCTAGAACTGAGAGCAAAGGCTTGCCAGAGATCAGGAGGCAAAAATCTGAAATACAGAATTAACAGGTCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498833.1
CDS-3UTR CAA 90 bp TCAGGGGAGCCTTCAGAATTTAAGACATCAGGGCTCCTGTCAGGAATACGGATGTTGGTATGTCCCTGTTaGTCAACTATTTCCAAATTG +
Preference number: 5 (lower is better)
Translates to: SGEPSEFKTSGLLSGIRMLVCPC*STISKL
Trigger: CAATTTGGAAATAGTTGACAAACAGGGACATACCAA...CATCCGTATTCCTGACAGGAGCCCTGATGTCTTAAATTCTGAAGGCTCCCCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CAA 90 bp TCAGGGGAGCCTTCAGAATTTAAGACATCAGGGCTCCTGTCAGGAATACGGATGGTAAAACTCAATACTTaGGTATGTCCCTGTTTGTCA +
Preference number: 5 (lower is better)
Translates to: SGEPSEFKTSGLLSGIRMVKLNT*VCPCLS
Trigger: TGACAAACAGGGACATACCAAAGTATTGAGTTTTAC...CATCCGTATTCCTGACAGGAGCCCTGATGTCTTAAATTCTGAAGGCTCCCCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CAA 90 bp TCTTCTTGGAGACTACAAGCGGAAAACCTATTGGCATCTGTCCCAGCCCCACAATGGTATACAGATGGTTaGGATAAAGATGGAATCGTA +
Preference number: 5 (lower is better)
Translates to: SSWRLQAENLLASVPAPQWYTDG*DKDGIV
Trigger: TACGATTCCATCTTTATCCAAACCATCTGTATACCA...TTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTCTCCAAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp TCAGGGGAGCCTTCAGAATTTAAGACATCAGGGCTCCTGTCAGGAATACGGATGTGGTATACAGATGGTTaGGATAAAGATGGAATCGTA +
Preference number: 5 (lower is better)
Translates to: SGEPSEFKTSGLLSGIRMWYTDG*DKDGIV
Trigger: TACGATTCCATCTTTATCCAAACCATCTGTATACCA...CATCCGTATTCCTGACAGGAGCCCTGATGTCTTAAATTCTGAAGGCTCCCCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CAA 90 bp TCTGAGCTCTGCATAAGCAGGAACAAGAGGAAAACACTAGCATGCTCTCTTGGTCACTGTATACCACTTTaGACAAACCATGCTGGGATA +
Preference number: 5 (lower is better)
Translates to: SELCISRNKRKTLACSLGHCIPL*TNHAGI
Trigger: TATCCCAGCATGGTTTGTCAAAAGTGGTATACAGTG...ACCAAGAGAGCATGCTAGTGTTTTCCTCTTGTTCCTGCTTATGCAGAGCTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp GGGCTCCTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAAGAAGCATGGTGTGATTTCAACTaGAATACACCTTGTACCTTC +
Preference number: 5 (lower is better)
Translates to: GLLSGIRMKDPGYFHKEAWCDFN*NTPCTF
Trigger: GAAGGTACAAGGTGTATTCAAGTTGAAATCACACCA...TGCTTCTTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAGGAGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CAA 90 bp AGCAGGAACAAGAGGAAAACACTAGCATGCTCTCTTGGTGACTACAGCAAGGGATGGTTACTGCATTTCTaGATATTCGAGAGGAAGTTG +
Preference number: 5 (lower is better)
Translates to: SRNKRKTLACSLGDYSKGWLLHF*IFERKL
Trigger: CAACTTCCTCTCGAATATCAAGAAATGCAGTAACCA...TCCCTTGCTGTAGTCACCAAGAGAGCATGCTAGTGTTTTCCTCTTGTTCCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp TTCCTCCAGTTTTGCTTCCTCCTGACCGTCTGTGGTTCTTTCCTATACTTGGCTTGGTTACTGCATTTCTaGATATTCGAGAGGAAGTTG +
Preference number: 5 (lower is better)
Translates to: FLQFCFLLTVCGSFLYLAWLLHF*IFERKL
Trigger: CAACTTCCTCTCGAATATCAAGAAATGCAGTAACCA...AGCCAAGTATAGGAAAGAACCACAGACGGTCAGGAGGAAGCAAAACTGGAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp CATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAAATAACCTATGACCCCTTATaGACATGCTGGTTACTGCAT +
Preference number: 5 (lower is better)
Translates to: HTCRLPLTLKAKHTAIKITYDPL*TCWLLH
Trigger: ATGCAGTAACCAGCATGTCAATAAGGGGTCATAGGT...TATTTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CAA 90 bp GAATTCCTGGAGTTGTGCCTCTGCCCCATTCTCTATAAAACAGTTCCCATACATACCTATGACCCCTTATaGACATGCTGGTTACTGCAT +
Preference number: 5 (lower is better)
Translates to: EFLELCLCPILYKTVPIHTYDPL*TCWLLH
Trigger: ATGCAGTAACCAGCATGTCAATAAGGGGTCATAGGT...ATGTATGGGAACTGTTTTATAGAGAATGGGGCAGAGGCACAACTCCAGGAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CAA 90 bp CATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAAATATTGGGCTCTCTGAGTTaGTTTTCGAGCAAAGTGATC +
Preference number: 5 (lower is better)
Translates to: HTCRLPLTLKAKHTAIKILGSLS*FSSKVI
Trigger: GATCACTTTGCTCGAAAACAAACTCAGAGAGCCCAA...TATTTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CAA 90 bp TCAGGGGAGCCTTCAGAATTTAAGACATCAGGGCTCCTGTCAGGAATACGGATGTGTGACACCACTGACTaGTTCAAAGGATTTACTAAA +
Preference number: 5 (lower is better)
Translates to: SGEPSEFKTSGLLSGIRMCDTTD*FKGFTK
Trigger: TTTAGTAAATCCTTTGAACAAGTCAGTGGTGTCACA...CATCCGTATTCCTGACAGGAGCCCTGATGTCTTAAATTCTGAAGGCTCCCCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CAA 90 bp AATAAAATCCCTCGTCAACTTCAGATATCTCCATCAGTTCTTCTTGACCTGTTACAAGCGGAAAACCTATaGGCATCTGTCCCAGCCCCA +
Preference number: 5 (lower is better)
Translates to: NKIPRQLQISPSVLLDLLQAENL*ASVPAP
Trigger: TGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTG...TAACAGGTCAAGAAGAACTGATGGAGATATCTGAAGTTGACGAGGGATTTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp TCCCATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAACTGATTGATGCTTCATaGGAAGTTCAGTTCTTTCTG +
Preference number: 5 (lower is better)
Translates to: SHTCRLPLTLKAKHTAIKLIDAS*EVQFFL
Trigger: CAGAAAGAACTGAACTTCCAATGAAGCATCAATCAG...TTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CAA 90 bp GTCACAGTGAAAAAGAGCCAAGAACTGGACAGCTCCTTAGGTCTTCCTCAACGGACCTGTCAAAATTTATaGTCACTGACAATCTTAGGG +
Preference number: 5 (lower is better)
Translates to: VTVKKSQELDSSLGLPQRTCQNL*SLTILG
Trigger: CCCTAAGATTGTCAGTGACAATAAATTTTGACAGGT...CCGTTGAGGAAGACCTAAGGAGCTGTCCAGTTCTTGGCTCTTTTTCACTGTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp TCAGGGGAGCCTTCAGAATTTAAGACATCAGGGCTCCTGTCAGGAATACGGATGACCTGTCAAAATTTATaGTCACTGACAATCTTAGGG +
Preference number: 5 (lower is better)
Translates to: SGEPSEFKTSGLLSGIRMTCQNL*SLTILG
Trigger: CCCTAAGATTGTCAGTGACAATAAATTTTGACAGGT...CATCCGTATTCCTGACAGGAGCCCTGATGTCTTAAATTCTGAAGGCTCCCCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CAA 90 bp AACAGTTCCCATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCACCTGTCAAAATTTATaGTCACTGACAATCTTAGGG +
Preference number: 5 (lower is better)
Translates to: NSSHTCRLPLTLKAKHTATCQNL*SLTILG
Trigger: CCCTAAGATTGTCAGTGACAATAAATTTTGACAGGT...GGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATGGGAACTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CAA 90 bp GTCACAGTGAAAAAGAGCCAAGAACTGGACAGCTCCTTAGGTCTTCCTCAACGGTCATACACATCATTTTaGTGTTTCCACATGCCTGTT +
Preference number: 5 (lower is better)
Translates to: VTVKKSQELDSSLGLPQRSYTSF*CFHMPV
Trigger: AACAGGCATGTGGAAACACAAAAATGATGTGTATGA...CCGTTGAGGAAGACCTAAGGAGCTGTCCAGTTCTTGGCTCTTTTTCACTGTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp TATCTGGTCACCCTCAGATGTTGTATCTTAGGATGGTCACTGCTGCTGGCCAGTTTATACAGTGGTATCTaGAGAGCTATGTTGCAAGAT +
Preference number: 5 (lower is better)
Translates to: YLVTLRCCILGWSLLLASLYSGI*RAMLQD
Trigger: ATCTTGCAACATAGCTCTCAAGATACCACTGTATAA...ACTGGCCAGCAGCAGTGACCATCCTAAGATACAACATCTGAGGGTGACCAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CAA 90 bp CTGTTTTCAGATTGGCTTCCTGACCAGGAGCTAGAGAATTCCTGGAGTTGTGCCTTATACAGTGGTATCTaGAGAGCTATGTTGCAAGAT +
Preference number: 5 (lower is better)
Translates to: LFSDWLPDQELENSWSCALYSGI*RAMLQD
Trigger: ATCTTGCAACATAGCTCTCAAGATACCACTGTATAA...GGCACAACTCCAGGAATTCTCTAGCTCCTGGTCAGGAAGCCAATCTGAAAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp AGCAGGAACAAGAGGAAAACACTAGCATGCTCTCTTGGTGACTACAGCAAGGGACCTAAGCACCTCAACTaGCTTAAAATGCCAATCTTA +
Preference number: 5 (lower is better)
Translates to: SRNKRKTLACSLGDYSKGPKHLN*LKMPIL
Trigger: TAAGATTGGCATTTTAAGCAAGTTGAGGTGCTTAGG...TCCCTTGCTGTAGTCACCAAGAGAGCATGCTAGTGTTTTCCTCTTGTTCCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp CCAGGAGCTAGAGAATTCCTGGAGTTGTGCCTCTGCCCCATTCTCTATAAAACAGTCTGGGACAGTCCCTaGAAAAGTCTATTTTTGTTT +
Preference number: 5 (lower is better)
Translates to: PGAREFLELCLCPILYKTVWDSP*KSLFLF
Trigger: AAACAAAAATAGACTTTTCAAGGGACTGTCCCAGAC...TGTTTTATAGAGAATGGGGCAGAGGCACAACTCCAGGAATTCTCTAGCTCCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp CTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAAGAAGCAAAGTTGGTGTATGGGGGAGAGTaGATGCACTTCCAATTCACT +
Preference number: 5 (lower is better)
Translates to: LSGIRMKDPGYFHKEAKLVYGGE*MHFQFT
Trigger: AGTGAATTGGAAGTGCATCAACTCTCCCCCATACAC...CAACTTTGCTTCTTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CAA 90 bp GTCACAGTGAAAAAGAGCCAAGAACTGGACAGCTCCTTAGGTCTTCCTCAACGGTGTGGTTTCCATAACTaGTTTGCTTCTCTGATTCTT +
Preference number: 5 (lower is better)
Translates to: VTVKKSQELDSSLGLPQRCGFHN*FASLIL
Trigger: AAGAATCAGAGAAGCAAACAAGTTATGGAAACCACA...CCGTTGAGGAAGACCTAAGGAGCTGTCCAGTTCTTGGCTCTTTTTCACTGTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS GCA 90 bp CCCACTGCATGGAATATTCTTTTACCTTGCCACCTGGAAAACTTGTaGTTATCCGTAGACTGGATTAAGGATTGCCTTGAAACCATGTGT +
Preference number: 5 (lower is better)
Translates to: PTAWNILLPCHLENL*LSVDWIKDCLETMC
Trigger: ACACATGGTTTCAAGGCAATCCTTAATCCAGTCTACGGATAAGCACAAGTTTTCCAGGTGGCAAGGTAAAAGAATATTCCATGCAGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467005.6
CDS-3UTR CAA 90 bp CTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAAGAAGCAAAGTTGAAATTGCAGCGTAAATaGAAGCAACTGCTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: LSGIRMKDPGYFHKEAKLKLQRK*KQLLLS
Trigger: GGAGAGGAGCAGTTGCTTCAATTTACGCTGCAATTT...CAACTTTGCTTCTTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CAA 90 bp ATGTGGGACTGTGACACCACTGACTTGTTCAAAGGATTTACTAAATACAGTCGCAAATTGCAGCGTAAATaGAAGCAACTGCTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: MWDCDTTDLFKGFTKYSRKLQRK*KQLLLS
Trigger: GGAGAGGAGCAGTTGCTTCAATTTACGCTGCAATTT...GCGACTGTATTTAGTAAATCCTTTGAACAAGTCAGTGGTGTCACAGTCCCACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681402.1
CDS-3UTR CAA 90 bp TCCCATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAATTGGTATGTCCCTGTTaGTCAACTATTTCCAAATTG +
Preference number: 5 (lower is better)
Translates to: SHTCRLPLTLKAKHTAIKLVCPC*STISKL
Trigger: CAATTTGGAAATAGTTGACAAACAGGGACATACCAA...TTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CAA 90 bp ACAGCAGATGACGGGTTATGTGGGACTGTGACACCACTGACTTGTTCAAAGGATTTGGTATGTCCCTGTTaGTCAACTATTTCCAAATTG +
Preference number: 5 (lower is better)
Translates to: TADDGLCGTVTPLTCSKDLVCPC*STISKL
Trigger: CAATTTGGAAATAGTTGACAAACAGGGACATACCAA...ATCCTTTGAACAAGTCAGTGGTGTCACAGTCCCACATAACCCGTCATCTGCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681402.1
CDS-3UTR CAA 90 bp GAATTCCTGGAGTTGTGCCTCTGCCCCATTCTCTATAAAACAGTTCCCATACATCACTGTATACCACTTTaGACAAACCATGCTGGGATA +
Preference number: 5 (lower is better)
Translates to: EFLELCLCPILYKTVPIHHCIPL*TNHAGI
Trigger: TATCCCAGCATGGTTTGTCAAAAGTGGTATACAGTG...ATGTATGGGAACTGTTTTATAGAGAATGGGGCAGAGGCACAACTCCAGGAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CAA 90 bp CCTTCAGAATTTAAGACATCAGGGCTCCTGTCAGGAATACGGATGAAAGACCCATGGTGTGATTTCAACTaGAATACACCTTGTACCTTC +
Preference number: 5 (lower is better)
Translates to: PSEFKTSGLLSGIRMKDPWCDFN*NTPCTF
Trigger: GAAGGTACAAGGTGTATTCAAGTTGAAATCACACCA...TGGGTCTTTCATCCGTATTCCTGACAGGAGCCCTGATGTCTTAAATTCTGAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CAA 90 bp ACATCAGGGCTCCTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAATGGTTACTGCATTTCTaGATATTCGAGAGGAAGTTG +
Preference number: 5 (lower is better)
Translates to: TSGLLSGIRMKDPGYFHKWLLHF*IFERKL
Trigger: CAACTTCCTCTCGAATATCAAGAAATGCAGTAACCA...TTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAGGAGCCCTGATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CAA 90 bp CTTTTCCTCCAGTTTTGCTTCCTCCTGACCGTCTGTGGTTCTTTCCTATACTTGTCAGTAGCATCATTATaGTTGTCAGGTTGCTCATGT +
Preference number: 5 (lower is better)
Translates to: LFLQFCFLLTVCGSFLYLSVASL*LSGCSC
Trigger: ACATGAGCAACCTGACAACAATAATGATGCTACTGA...CAAGTATAGGAAAGAACCACAGACGGTCAGGAGGAAGCAAAACTGGAGGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409923.5
ENST00000440481.6
CDS-3UTR CAA 90 bp TCAGGGCTCCTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAAGAATCAGTAGCATCATTATaGTTGTCAGGTTGCTCATGT +
Preference number: 5 (lower is better)
Translates to: SGLLSGIRMKDPGYFHKESVASL*LSGCSC
Trigger: ACATGAGCAACCTGACAACAATAATGATGCTACTGA...TTCTTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAGGAGCCCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409923.5
ENST00000440481.6
CDS-3UTR CAA 90 bp CTCCAGTTTTGCTTCCTCCTGACCGTCTGTGGTTCTTTCCTATACTTGGCTTGTTGTGACACCACTGACTaGTTCAAAGGATTTACTAAA +
Preference number: 5 (lower is better)
Translates to: LQFCFLLTVCGSFLYLACCDTTD*FKGFTK
Trigger: TTTAGTAAATCCTTTGAACAAGTCAGTGGTGTCACA...ACAAGCCAAGTATAGGAAAGAACCACAGACGGTCAGGAGGAAGCAAAACTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp ACTTTCATAAAGAAGCAAAGTTGTATTTCCAGGTTCACTAGGTTATGGGAGAAACAAGCGGAAAACCTATaGGCATCTGTCCCAGCCCCA +
Preference number: 5 (lower is better)
Translates to: TFIKKQSCISRFTRLWEKQAENL*ASVPAP
Trigger: TGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTG...TTTCTCCCATAACCTAGTGAACCTGGAAATACAACTTTGCTTCTTTATGAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CAA 90 bp TCTGAGCTCTGCATAAGCAGGAACAAGAGGAAAACACTAGCATGCTCTCTTGGTCTGATTGATGCTTCATaGGAAGTTCAGTTCTTTCTG +
Preference number: 5 (lower is better)
Translates to: SELCISRNKRKTLACSLGLIDAS*EVQFFL
Trigger: CAGAAAGAACTGAACTTCCAATGAAGCATCAATCAG...ACCAAGAGAGCATGCTAGTGTTTTCCTCTTGTTCCTGCTTATGCAGAGCTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp ACATCAGGGCTCCTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAACTGATTGATGCTTCATaGGAAGTTCAGTTCTTTCTG +
Preference number: 5 (lower is better)
Translates to: TSGLLSGIRMKDPGYFHKLIDAS*EVQFFL
Trigger: CAGAAAGAACTGAACTTCCAATGAAGCATCAATCAG...TTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAGGAGCCCTGATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CAA 90 bp ATCTCTCAGCTCTGTCAGCTAACATTTCCCCAAACTTATTCTACAATGTTTCCTACATGCAGACTCCCTTaGACTCTGAAGGCCAAACAC +
Preference number: 5 (lower is better)
Translates to: ISQLCQLTFPQTYSTMFPTCRLP*TLKAKH
Trigger: GTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGT...AGGAAACATTGTAGAATAAGTTTGGGGAAATGTTAGCTGACAGAGCTGAGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp GCAAGATTTACACTGATTTCCAGGAAGTCTTCCAATGACGTATGCTCTGAATTAACATGCAGACTCCCTTaGACTCTGAAGGCCAAACAC +
Preference number: 5 (lower is better)
Translates to: ARFTLISRKSSNDVCSELTCRLP*TLKAKH
Trigger: GTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGT...TAATTCAGAGCATACGTCATTGGAAGACTTCCTGGAAATCAGTGTAAATCTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CAA 90 bp ACAGCAGATGACGGGTTATGTGGGACTGTGACACCACTGACTTGTTCAAAGGATTTATACAGTGGTATCTaGAGAGCTATGTTGCAAGAT +
Preference number: 5 (lower is better)
Translates to: TADDGLCGTVTPLTCSKDLYSGI*RAMLQD
Trigger: ATCTTGCAACATAGCTCTCAAGATACCACTGTATAA...ATCCTTTGAACAAGTCAGTGGTGTCACAGTCCCACATAACCCGTCATCTGCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp GAATTCCTGGAGTTGTGCCTCTGCCCCATTCTCTATAAAACAGTTCCCATACATCAGAGTATAAATGCTTaGGCAGCCTTCAAAGCATAC +
Preference number: 5 (lower is better)
Translates to: EFLELCLCPILYKTVPIHQSINA*AAFKAY
Trigger: GTATGCTTTGAAGGCTGCCAAAGCATTTATACTCTG...ATGTATGGGAACTGTTTTATAGAGAATGGGGCAGAGGCACAACTCCAGGAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp CTTTTCCTCCAGTTTTGCTTCCTCCTGACCGTCTGTGGTTCTTTCCTATACTTGCCTAAGCACCTCAACTaGCTTAAAATGCCAATCTTA +
Preference number: 5 (lower is better)
Translates to: LFLQFCFLLTVCGSFLYLPKHLN*LKMPIL
Trigger: TAAGATTGGCATTTTAAGCAAGTTGAGGTGCTTAGG...CAAGTATAGGAAAGAACCACAGACGGTCAGGAGGAAGCAAAACTGGAGGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000440481.6
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp CCAGGAGCTAGAGAATTCCTGGAGTTGTGCCTCTGCCCCATTCTCTATAAAACAAATCACTTGGGAACCTaGTTAAGAATGCAAATTCTG +
Preference number: 5 (lower is better)
Translates to: PGAREFLELCLCPILYKTNHLGT*LRMQIL
Trigger: CAGAATTTGCATTCTTAACAAGGTTCCCAAGTGATT...TGTTTTATAGAGAATGGGGCAGAGGCACAACTCCAGGAATTCTCTAGCTCCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp CCACTGACTTGTTCAAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAATGCAAGACCCCAATTTaGTGTGGAATCCTTCTCATG +
Preference number: 5 (lower is better)
Translates to: PLTCSKDLLNTVAAVLAKCKTPI*CGILLM
Trigger: CATGAGAAGGATTCCACACAAAATTGGGGTCTTGCA...TTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTTGAACAAGTCAGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440481.6
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp CTGTATTTCCATGTCTTTTCCACCTATGACCCCTTATTGACATGCTGGTTACTGTGCAAGACCCCAATTTaGTGTGGAATCCTTCTCATG +
Preference number: 5 (lower is better)
Translates to: LYFHVFSTYDPLLTCWLLCKTPI*CGILLM
Trigger: CATGAGAAGGATTCCACACAAAATTGGGGTCTTGCA...CAGTAACCAGCATGTCAATAAGGGGTCATAGGTGGAAAAGACATGGAAATACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp ACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAAATAGGAGTCTGGGACAGTCCCTaGAAAAGTCTATTTTTGTTT +
Preference number: 5 (lower is better)
Translates to: TCRLPLTLKAKHTAIKIGVWDSP*KSLFLF
Trigger: AAACAAAAATAGACTTTTCAAGGGACTGTCCCAGAC...TCCTATTTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp GAATTCCTGGAGTTGTGCCTCTGCCCCATTCTCTATAAAACAGTTCCCATACATCAGATATCCAATTCATaGCTGACAGCTACTAGACCA +
Preference number: 5 (lower is better)
Translates to: EFLELCLCPILYKTVPIHQISNS*LTATRP
Trigger: TGGTCTAGTAGCTGTCAGCAATGAATTGGATATCTG...ATGTATGGGAACTGTTTTATAGAGAATGGGGCAGAGGCACAACTCCAGGAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CAA 90 bp CATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAAATAAAGATACATCAATTGTaGGAGCTCCAGTGGTACGAT +
Preference number: 5 (lower is better)
Translates to: HTCRLPLTLKAKHTAIKIKIHQL*ELQWYD
Trigger: ATCGTACCACTGGAGCTCCAACAATTGATGTATCTT...TATTTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CAA 90 bp ACAAGATACCAGATAATGCCAATCCTACTTACTGGTCCTCAGACCACACAGCTACGAGTATTCATGGGTTaGCTTGCTTGTTTGGTTTGT +
Preference number: 5 (lower is better)
Translates to: TRYQIMPILLTGPQTTQLRVFMG*LACLVC
Trigger: ACAAACCAAACAAGCAAGCAAACCCATGAATACTCG...TAGCTGTGTGGTCTGAGGACCAGTAAGTAGGATTGGCATTATCTGGTATCTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CAA 90 bp ATAAAGTCAGGGGAGCCTTCAGAATTTAAGACATCAGGGCTCCTGTCAGGAATATGCCCAAAGTTTGTATaGGAAGTTAGTGATAGAGGC +
Preference number: 5 (lower is better)
Translates to: IKSGEPSEFKTSGLLSGICPKFV*EVSDRG
Trigger: GCCTCTATCACTAACTTCCAATACAAACTTTGGGCA...TATTCCTGACAGGAGCCCTGATGTCTTAAATTCTGAAGGCTCCCCTGACTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CAA 90 bp TCCCATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAAGCAAATGTGGACTATTaGGAAACCTTTCACAATTCT +
Preference number: 5 (lower is better)
Translates to: SHTCRLPLTLKAKHTAIKANVDY*ETFHNS
Trigger: AGAATTGTGAAAGGTTTCCAAATAGTCCACATTTGC...TTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679826.1
CDS-3UTR CAA 90 bp AAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTAGGCTTGGTATGTCCCTGTTaGTCAACTATTTCCAAATTG +
Preference number: 5 (lower is better)
Translates to: KDLLNTVAAVLAKPWLLGLVCPC*STISKL
Trigger: CAATTTGGAAATAGTTGACAAACAGGGACATACCAA...GCCTAGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681402.1
CDS-3UTR CAA 90 bp GGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTAGGCTTTTGGTATGTCCCTGTTaGTCAACTATTTCCAAATTG +
Preference number: 5 (lower is better)
Translates to: GFTKYSRCGLSQTMATRLLVCPC*STISKL
Trigger: CAATTTGGAAATAGTTGACAAACAGGGACATACCAA...AAGCCTAGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681402.1
CDS-3UTR CAA 90 bp AAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTAGGCGTAAAACTCAATACTTaGGTATGTCCCTGTTTGTCA +
Preference number: 5 (lower is better)
Translates to: KDLLNTVAAVLAKPWLLGVKLNT*VCPCLS
Trigger: TGACAAACAGGGACATACCAAAGTATTGAGTTTTAC...GCCTAGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp CCTTCAGAATTTAAGACATCAGGGCTCCTGTCAGGAATACGGATGAAAGACCCATGGTATACAGATGGTTaGGATAAAGATGGAATCGTA +
Preference number: 5 (lower is better)
Translates to: PSEFKTSGLLSGIRMKDPWYTDG*DKDGIV
Trigger: TACGATTCCATCTTTATCCAAACCATCTGTATACCA...TGGGTCTTTCATCCGTATTCCTGACAGGAGCCCTGATGTCTTAAATTCTGAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CAA 90 bp CCACTGACTTGTTCAAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACACTGTATACCACTTTaGACAAACCATGCTGGGATA +
Preference number: 5 (lower is better)
Translates to: PLTCSKDLLNTVAAVLAKHCIPL*TNHAGI
Trigger: TATCCCAGCATGGTTTGTCAAAAGTGGTATACAGTG...TTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTTGAACAAGTCAGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp CTGTATTTCCATGTCTTTTCCACCTATGACCCCTTATTGACATGCTGGTTACTGCACTGTATACCACTTTaGACAAACCATGCTGGGATA +
Preference number: 5 (lower is better)
Translates to: LYFHVFSTYDPLLTCWLLHCIPL*TNHAGI
Trigger: TATCCCAGCATGGTTTGTCAAAAGTGGTATACAGTG...CAGTAACCAGCATGTCAATAAGGGGTCATAGGTGGAAAAGACATGGAAATACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp TTTCCAAAGTCCAGCAGTAGGGTAAATCAGCTTTACAGCCTATTATACCTTAATTGTCAGCATCTCCCTTaGAGGATGAGGTCCACTGTA +
Preference number: 5 (lower is better)
Translates to: FPKSSSRVNQLYSLLYLNCQHLP*RMRSTV
Trigger: TACAGTGGACCTCATCCTCAAAGGGAGATGCTGACA...ATTAAGGTATAATAGGCTGTAAAGCTGATTTACCCTACTGCTGGACTTTGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CAA 90 bp CTCTCTCTCACTCTGAATGATGACTTAAGTACATTTGCTTTACAGGGGAACCGCTGGTGTGATTTCAACTaGAATACACCTTGTACCTTC +
Preference number: 5 (lower is better)
Translates to: LSLTLNDDLSTFALQGNRWCDFN*NTPCTF
Trigger: GAAGGTACAAGGTGTATTCAAGTTGAAATCACACCA...GCGGTTCCCCTGTAAAGCAAATGTACTTAAGTCATCATTCAGAGTGAGAGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp ATAAAACAGTTCCCATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACATTATTGTTGTCAGGTaGCTCATGTCTTTTCCACCT +
Preference number: 5 (lower is better)
Translates to: IKQFPYMQTPFDSEGQTHIIVVR*LMSFPP
Trigger: AGGTGGAAAAGACATGAGCAACCTGACAACAATAAT...GTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATGGGAACTGTTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409923.5
ENST00000440481.6
CDS-3UTR CAA 90 bp ACTGTGACACCACTGACTTGTTCAAAGGATTTACTAAATACAGTCGCTGCGGTCGTAGCATCATTATTGTaGTCAGGTTGCTCATGTCTT +
Preference number: 5 (lower is better)
Translates to: TVTPLTCSKDLLNTVAAVVASLL*SGCSCL
Trigger: AAGACATGAGCAACCTGACAACAATAATGATGCTAC...GACCGCAGCGACTGTATTTAGTAAATCCTTTGAACAAGTCAGTGGTGTCACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409923.5
ENST00000440481.6
CDS-3UTR CAA 90 bp ACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAAATAGGATGTGACACCACTGACTaGTTCAAAGGATTTACTAAA +
Preference number: 5 (lower is better)
Translates to: TCRLPLTLKAKHTAIKIGCDTTD*FKGFTK
Trigger: TTTAGTAAATCCTTTGAACAAGTCAGTGGTGTCACA...TCCTATTTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CAA 90 bp ACATCAGGGCTCCTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAATGTGACACCACTGACTaGTTCAAAGGATTTACTAAA +
Preference number: 5 (lower is better)
Translates to: TSGLLSGIRMKDPGYFHKCDTTD*FKGFTK
Trigger: TTTAGTAAATCCTTTGAACAAGTCAGTGGTGTCACA...TTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAGGAGCCCTGATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CAA 90 bp GGAATGAGGTCATTGTCTTATCACTTACCCCCAAAAGCTCTCAATGGCTCAACTCTGATTGATGCTTCATaGGAAGTTCAGTTCTTTCTG +
Preference number: 5 (lower is better)
Translates to: GMRSLSYHLPPKALNGSTLIDAS*EVQFFL
Trigger: CAGAAAGAACTGAACTTCCAATGAAGCATCAATCAG...AGTTGAGCCATTGAGAGCTTTTGGGGGTAAGTGATAAGACAATGACCTCATTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CAA 90 bp TTTGAGGATGAGGTCCACTGTATACCACTTTTGACAAACCATGCTGGGATAGTGCTGATTGATGCTTCATaGGAAGTTCAGTTCTTTCTG +
Preference number: 5 (lower is better)
Translates to: FEDEVHCIPLLTNHAGIVLIDAS*EVQFFL
Trigger: CAGAAAGAACTGAACTTCCAATGAAGCATCAATCAG...CACTATCCCAGCATGGTTTGTCAAAAGTGGTATACAGTGGACCTCATCCTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp CTCTCTCTCACTCTGAATGATGACTTAAGTACATTTGCTTTACAGGGGAACCGCCCTAAGCACCTCAACTaGCTTAAAATGCCAATCTTA +
Preference number: 5 (lower is better)
Translates to: LSLTLNDDLSTFALQGNRPKHLN*LKMPIL
Trigger: TAAGATTGGCATTTTAAGCAAGTTGAGGTGCTTAGG...GCGGTTCCCCTGTAAAGCAAATGTACTTAAGTCATCATTCAGAGTGAGAGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp TTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTAGGCTTAGGAATCACTTGGGAACCTaGTTAAGAATGCAAATTCTG +
Preference number: 5 (lower is better)
Translates to: FTKYSRCGLSQTMATRLRNHLGT*LRMQIL
Trigger: CAGAATTTGCATTCTTAACAAGGTTCCCAAGTGATT...CCTAAGCCTAGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440481.6
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp AAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTAGGCAATCACTTGGGAACCTaGTTAAGAATGCAAATTCTG +
Preference number: 5 (lower is better)
Translates to: KDLLNTVAAVLAKPWLLGNHLGT*LRMQIL
Trigger: CAGAATTTGCATTCTTAACAAGGTTCCCAAGTGATT...GCCTAGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440481.6
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp CTCTCTCTCACTCTGAATGATGACTTAAGTACATTTGCTTTACAGGGGAACCGCGTCTGGGACAGTCCCTaGAAAAGTCTATTTTTGTTT +
Preference number: 5 (lower is better)
Translates to: LSLTLNDDLSTFALQGNRVWDSP*KSLFLF
Trigger: AAACAAAAATAGACTTTTCAAGGGACTGTCCCAGAC...GCGGTTCCCCTGTAAAGCAAATGTACTTAAGTCATCATTCAGAGTGAGAGAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp ACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAAATAGGAATCTCTTCAAGAAGTTaGCCCTTTCTAACTACAATC +
Preference number: 5 (lower is better)
Translates to: TCRLPLTLKAKHTAIKIGISSRS*PFLTTI
Trigger: GATTGTAGTTAGAAAGGGCAAACTTCTTGAAGAGAT...TCCTATTTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CAA 90 bp ACTCGGTTTAAACTGGTAGCCAAAGCAGTTGCAGTTAAAACTATGTCCAGAGTACCAAAGATACATCAATaGTTGGAGCTCCAGTGGTAC +
Preference number: 5 (lower is better)
Translates to: TRFKLVAKAVAVKTMSRVPKIHQ*LELQWY
Trigger: GTACCACTGGAGCTCCAACAATTGATGTATCTTTGG...TACTCTGGACATAGTTTTAACTGCAACTGCTTTGGCTACCAGTTTAAACCGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CAA 90 bp GCAAGATTTACACTGATTTCCAGGAAGTCTTCCAATGACGTATGCTCTGAATTACCTCCAGAACCATCTTaGAGTGAAGCTGAAACACTG +
Preference number: 5 (lower is better)
Translates to: ARFTLISRKSSNDVCSELPPEPS*SEAETL
Trigger: CAGTGTTTCAGCTTCACTCAAAGATGGTTCTGGAGG...TAATTCAGAGCATACGTCATTGGAAGACTTCCTGGAAATCAGTGTAAATCTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CAA 90 bp ACAAGATACCAGATAATGCCAATCCTACTTACTGGTCCTCAGACCACACAGCTATTTAGCTCCCAATTTTaGTCACTCATCCTCCAATCT +
Preference number: 5 (lower is better)
Translates to: TRYQIMPILLTGPQTTQLFSSQF*SLILQS
Trigger: AGATTGGAGGATGAGTGACAAAAATTGGGAGCTAAA...TAGCTGTGTGGTCTGAGGACCAGTAAGTAGGATTGGCATTATCTGGTATCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CAA 90 bp ATAAAACAGTTCCCATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACGCCTTTTACCCAGATTaGGCAAATTCCATAATGGAA +
Preference number: 5 (lower is better)
Translates to: IKQFPYMQTPFDSEGQTHAFYPD*ANSIME
Trigger: TTCCATTATGGAATTTGCCAAATCTGGGTAAAAGGC...GTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATGGGAACTGTTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CAA 90 bp ACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAAATAGGAATTGCATTAGCAACCTaGAACAAATTTGACACAGTG +
Preference number: 5 (lower is better)
Translates to: TCRLPLTLKAKHTAIKIGIALAT*NKFDTV
Trigger: CACTGTGTCAAATTTGTTCAAGGTTGCTAATGCAAT...TCCTATTTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679789.1
CDS-3UTR CAA 90 bp ATCTCTCAGCTCTGTCAGCTAACATTTCCCCAAACTTATTCTACAATGTTTCCTAAATTGCAGCGTAAATaGAAGCAACTGCTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: ISQLCQLTFPQTYSTMFPKLQRK*KQLLLS
Trigger: GGAGAGGAGCAGTTGCTTCAATTTACGCTGCAATTT...AGGAAACATTGTAGAATAAGTTTGGGGAAATGTTAGCTGACAGAGCTGAGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681402.1
CDS-3UTR CAA 90 bp CATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAAATATTGGTATGTCCCTGTTaGTCAACTATTTCCAAATTG +
Preference number: 5 (lower is better)
Translates to: HTCRLPLTLKAKHTAIKILVCPC*STISKL
Trigger: CAATTTGGAAATAGTTGACAAACAGGGACATACCAA...TATTTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CAA 90 bp ATAAAGTCAGGGGAGCCTTCAGAATTTAAGACATCAGGGCTCCTGTCAGGAATATGGTATACAGATGGTTaGGATAAAGATGGAATCGTA +
Preference number: 5 (lower is better)
Translates to: IKSGEPSEFKTSGLLSGIWYTDG*DKDGIV
Trigger: TACGATTCCATCTTTATCCAAACCATCTGTATACCA...TATTCCTGACAGGAGCCCTGATGTCTTAAATTCTGAAGGCTCCCCTGACTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CAA 90 bp ACTGTGACACCACTGACTTGTTCAAAGGATTTACTAAATACAGTCGCTGCGGTCCACAAACACAGATTCTaGAACAAATTTGACACAGTG +
Preference number: 5 (lower is better)
Translates to: TVTPLTCSKDLLNTVAAVHKHRF*NKFDTV
Trigger: CACTGTGTCAAATTTGTTCAAGAATCTGTGTTTGTG...GACCGCAGCGACTGTATTTAGTAAATCCTTTGAACAAGTCAGTGGTGTCACAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp CTGACTTGTTCAAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGTGTGATTTCAACTaGAATACACCTTGTACCTTC +
Preference number: 5 (lower is better)
Translates to: LTCSKDLLNTVAAVLAKPWCDFN*NTPCTF
Trigger: GAAGGTACAAGGTGTATTCAAGTTGAAATCACACCA...TGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTTGAACAAGTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp ATGTGGGACTGTGACACCACTGACTTGTTCAAAGGATTTACTAAATACAGTCGCTGGTGTGATTTCAACTaGAATACACCTTGTACCTTC +
Preference number: 5 (lower is better)
Translates to: MWDCDTTDLFKGFTKYSRWCDFN*NTPCTF
Trigger: GAAGGTACAAGGTGTATTCAAGTTGAAATCACACCA...GCGACTGTATTTAGTAAATCCTTTGAACAAGTCAGTGGTGTCACAGTCCCACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp CCACTGACTTGTTCAAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAATGGTGTGATTTCAACTaGAATACACCTTGTACCTTC +
Preference number: 5 (lower is better)
Translates to: PLTCSKDLLNTVAAVLAKWCDFN*NTPCTF
Trigger: GAAGGTACAAGGTGTATTCAAGTTGAAATCACACCA...TTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTTGAACAAGTCAGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp CTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAAGAAGCAAAGTTGTGGTTACTGCATTTCTaGATATTCGAGAGGAAGTTG +
Preference number: 5 (lower is better)
Translates to: LSGIRMKDPGYFHKEAKLWLLHF*IFERKL
Trigger: CAACTTCCTCTCGAATATCAAGAAATGCAGTAACCA...CAACTTTGCTTCTTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CAA 90 bp TTCAAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTTGGTTACTGCATTTCTaGATATTCGAGAGGAAGTTG +
Preference number: 5 (lower is better)
Translates to: FKGFTKYSRCGLSQTMATWLLHF*IFERKL
Trigger: CAACTTCCTCTCGAATATCAAGAAATGCAGTAACCA...AGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp AAATGTTTCAGAGATAACAACAGAAATGCCTCTAGCCATCCCCTGGAATCATATACCTATGACCCCTTATaGACATGCTGGTTACTGCAT +
Preference number: 5 (lower is better)
Translates to: KCFRDNNRNASSHPLESYTYDPL*TCWLLH
Trigger: ATGCAGTAACCAGCATGTCAATAAGGGGTCATAGGT...ATATGATTCCAGGGGATGGCTAGAGGCATTTCTGTTGTTATCTCTGAAACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CAA 90 bp GTGAGACCACTGGGAATTCTACATATTAGACGAGTAATTTGTTTGCACTCTGATACCTATGACCCCTTATaGACATGCTGGTTACTGCAT +
Preference number: 5 (lower is better)
Translates to: VRPLGILHIRRVICLHSDTYDPL*TCWLLH
Trigger: ATGCAGTAACCAGCATGTCAATAAGGGGTCATAGGT...ATCAGAGTGCAAACAAATTACTCGTCTAATATGTAGAATTCCCAGTGGTCTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp ATTGACATGCTGGTTACTGCATTTCTTGATATTCGAGAGGAAGTTGGTGTGATTACCTATGACCCCTTATaGACATGCTGGTTACTGCAT +
Preference number: 5 (lower is better)
Translates to: IDMLVTAFLDIREEVGVITYDPL*TCWLLH
Trigger: ATGCAGTAACCAGCATGTCAATAAGGGGTCATAGGT...AATCACACCAACTTCCTCTCGAATATCAAGAAATGCAGTAACCAGCATGTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp TTCAAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTGTAGCATCATTATTGTaGTCAGGTTGCTCATGTCTT +
Preference number: 5 (lower is better)
Translates to: FKGFTKYSRCGLSQTMATVASLL*SGCSCL
Trigger: AAGACATGAGCAACCTGACAACAATAATGATGCTAC...AGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409923.5
ENST00000440481.6
CDS-3UTR CAA 90 bp CTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAAGAAGCAAAGTTGTTTTCTTACAGATTTTaGCCTCCTGATCTCTGGCAA +
Preference number: 5 (lower is better)
Translates to: LSGIRMKDPGYFHKEAKLFSYRF*PPDLWQ
Trigger: TTGCCAGAGATCAGGAGGCAAAAATCTGTAAGAAAA...CAACTTTGCTTCTTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409923.5
ENST00000440481.6
CDS-3UTR CAA 90 bp ATCTCTCAGCTCTGTCAGCTAACATTTCCCCAAACTTATTCTACAATGTTTCCTAATTGTGACTACTGTTaGATAAACCCGACTGGCTGG +
Preference number: 5 (lower is better)
Translates to: ISQLCQLTFPQTYSTMFPNCDYC*INPTGW
Trigger: CCAGCCAGTCGGGTTTATCAAACAGTAGTCACAATT...AGGAAACATTGTAGAATAAGTTTGGGGAAATGTTAGCTGACAGAGCTGAGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp ATGCTGGTTACTGCATTTCTTGATATTCGAGAGGAAGTTGGTGTGATTTCAACTAATTGTGACTACTGTTaGATAAACCCGACTGGCTGG +
Preference number: 5 (lower is better)
Translates to: MLVTAFLDIREEVGVISTNCDYC*INPTGW
Trigger: CCAGCCAGTCGGGTTTATCAAACAGTAGTCACAATT...AGTTGAAATCACACCAACTTCCTCTCGAATATCAAGAAATGCAGTAACCAGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp AAATGTTTCAGAGATAACAACAGAAATGCCTCTAGCCATCCCCTGGAATCATATAATTGTGACTACTGTTaGATAAACCCGACTGGCTGG +
Preference number: 5 (lower is better)
Translates to: KCFRDNNRNASSHPLESYNCDYC*INPTGW
Trigger: CCAGCCAGTCGGGTTTATCAAACAGTAGTCACAATT...ATATGATTCCAGGGGATGGCTAGAGGCATTTCTGTTGTTATCTCTGAAACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CAA 90 bp AAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTAGGGGTTCTTTCCTATACTaGGCTTGTTACTACAATTGT +
Preference number: 5 (lower is better)
Translates to: KGFTKYSRCGLSQTMATRGSFLY*ACYYNC
Trigger: ACAATTGTAGTAACAAGCCAAGTATAGGAAAGAACC...CCTAGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp ATAAAACAGTTCCCATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACGGTTCTTTCCTATACTaGGCTTGTTACTACAATTGT +
Preference number: 5 (lower is better)
Translates to: IKQFPYMQTPFDSEGQTHGSFLY*ACYYNC
Trigger: ACAATTGTAGTAACAAGCCAAGTATAGGAAAGAACC...GTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATGGGAACTGTTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CAA 90 bp ATTGACATGCTGGTTACTGCATTTCTTGATATTCGAGAGGAAGTTGGTGTGATTTTGGGCTCTCTGAGTTaGTTTTCGAGCAAAGTGATC +
Preference number: 5 (lower is better)
Translates to: IDMLVTAFLDIREEVGVILGSLS*FSSKVI
Trigger: GATCACTTTGCTCGAAAACAAACTCAGAGAGCCCAA...AATCACACCAACTTCCTCTCGAATATCAAGAAATGCAGTAACCAGCATGTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp GAATTCCTGGAGTTGTGCCTCTGCCCCATTCTCTATAAAACAGTTCCCATACATTGTGACACCACTGACTaGTTCAAAGGATTTACTAAA +
Preference number: 5 (lower is better)
Translates to: EFLELCLCPILYKTVPIHCDTTD*FKGFTK
Trigger: TTTAGTAAATCCTTTGAACAAGTCAGTGGTGTCACA...ATGTATGGGAACTGTTTTATAGAGAATGGGGCAGAGGCACAACTCCAGGAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CAA 90 bp TGTTCAAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTGATTGATGCTTCATaGGAAGTTCAGTTCTTTCTG +
Preference number: 5 (lower is better)
Translates to: CSKDLLNTVAAVLAKPWLLIDAS*EVQFFL
Trigger: CAGAAAGAACTGAACTTCCAATGAAGCATCAATCAG...TAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTTGAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp CTCTCTCTCACTCTGAATGATGACTTAAGTACATTTGCTTTACAGGGGAACCGCACCTGTCAAAATTTATaGTCACTGACAATCTTAGGG +
Preference number: 5 (lower is better)
Translates to: LSLTLNDDLSTFALQGNRTCQNL*SLTILG
Trigger: CCCTAAGATTGTCAGTGACAATAAATTTTGACAGGT...GCGGTTCCCCTGTAAAGCAAATGTACTTAAGTCATCATTCAGAGTGAGAGAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp ATAAAGTCAGGGGAGCCTTCAGAATTTAAGACATCAGGGCTCCTGTCAGGAATAACCTGTCAAAATTTATaGTCACTGACAATCTTAGGG +
Preference number: 5 (lower is better)
Translates to: IKSGEPSEFKTSGLLSGITCQNL*SLTILG
Trigger: CCCTAAGATTGTCAGTGACAATAAATTTTGACAGGT...TATTCCTGACAGGAGCCCTGATGTCTTAAATTCTGAAGGCTCCCCTGACTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CAA 90 bp CTCTCTCTCACTCTGAATGATGACTTAAGTACATTTGCTTTACAGGGGAACCGCTCATACACATCATTTTaGTGTTTCCACATGCCTGTT +
Preference number: 5 (lower is better)
Translates to: LSLTLNDDLSTFALQGNRSYTSF*CFHMPV
Trigger: AACAGGCATGTGGAAACACAAAAATGATGTGTATGA...GCGGTTCCCCTGTAAAGCAAATGTACTTAAGTCATCATTCAGAGTGAGAGAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp CATACATGCAGACTCCCTTTGACTCTGAAGGCCAAACACACAGCCATCAAAATATCATACACATCATTTTaGTGTTTCCACATGCCTGTT +
Preference number: 5 (lower is better)
Translates to: HTCRLPLTLKAKHTAIKISYTSF*CFHMPV
Trigger: AACAGGCATGTGGAAACACAAAAATGATGTGTATGA...TATTTTGATGGCTGTGTGTTTGGCCTTCAGAGTCAAAGGGAGTCTGCATGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CAA 90 bp GATGACGGGTTATGTGGGACTGTGACACCACTGACTTGTTCAAAGGATTTACTATTATACAGTGGTATCTaGAGAGCTATGTTGCAAGAT +
Preference number: 5 (lower is better)
Translates to: DDGLCGTVTPLTCSKDLLLYSGI*RAMLQD
Trigger: ATCTTGCAACATAGCTCTCAAGATACCACTGTATAA...TAGTAAATCCTTTGAACAAGTCAGTGGTGTCACAGTCCCACATAACCCGTCATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp GGGTTATGTGGGACTGTGACACCACTGACTTGTTCAAAGGATTTACTAAATACACAGAGTATAAATGCTTaGGCAGCCTTCAAAGCATAC +
Preference number: 5 (lower is better)
Translates to: GLCGTVTPLTCSKDLLNTQSINA*AAFKAY
Trigger: GTATGCTTTGAAGGCTGCCAAAGCATTTATACTCTG...TGTATTTAGTAAATCCTTTGAACAAGTCAGTGGTGTCACAGTCCCACATAACCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440481.6
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp AAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTAGGAATCACTTGGGAACCTaGTTAAGAATGCAAATTCTG +
Preference number: 5 (lower is better)
Translates to: KGFTKYSRCGLSQTMATRNHLGT*LRMQIL
Trigger: CAGAATTTGCATTCTTAACAAGGTTCCCAAGTGATT...CCTAGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440481.6
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp AAATGTTTCAGAGATAACAACAGAAATGCCTCTAGCCATCCCCTGGAATCATATTGCAAGACCCCAATTTaGTGTGGAATCCTTCTCATG +
Preference number: 5 (lower is better)
Translates to: KCFRDNNRNASSHPLESYCKTPI*CGILLM
Trigger: CATGAGAAGGATTCCACACAAAATTGGGGTCTTGCA...ATATGATTCCAGGGGATGGCTAGAGGCATTTCTGTTGTTATCTCTGAAACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp ATCTCTCAGCTCTGTCAGCTAACATTTCCCCAAACTTATTCTACAATGTTTCCTACCCAAAGCTGCTTGTaGTTCTCAATGAGTGTTGCT +
Preference number: 5 (lower is better)
Translates to: ISQLCQLTFPQTYSTMFPTQSCL*FSMSVA
Trigger: AGCAACACTCATTGAGAACAACAAGCAGCTTTGGGT...AGGAAACATTGTAGAATAAGTTTGGGGAAATGTTAGCTGACAGAGCTGAGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS GCA 90 bp TTTCCTTGGAGTGCAGTTATAAAGTGCTCTGCTAAAACTGCACTCTaGCAGGTGAGTTTATTCCATCCTCCATCATTTTTCTTACAGATT +
Preference number: 5 (lower is better)
Translates to: FPWSAVIKCSAKTAL*QVSLFHPPSFFLQI
Trigger: AATCTGTAAGAAAAATGATGGAGGATGGAATAAACTCACCTGGCAGAGTGCAGTTTTAGCAGAGCACTTTATAACTGCACTCCAAGGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409923.5
ENST00000440481.6
CDS-3UTR CAA 90 bp ATGTGGGACTGTGACACCACTGACTTGTTCAAAGGATTTACTAAATACAGTCGCGTAAAACTCAATACTTaGGTATGTCCCTGTTTGTCA +
Preference number: 5 (lower is better)
Translates to: MWDCDTTDLFKGFTKYSRVKLNT*VCPCLS
Trigger: TGACAAACAGGGACATACCAAAGTATTGAGTTTTAC...GCGACTGTATTTAGTAAATCCTTTGAACAAGTCAGTGGTGTCACAGTCCCACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp TTCAAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTGTAAAACTCAATACTTaGGTATGTCCCTGTTTGTCA +
Preference number: 5 (lower is better)
Translates to: FKGFTKYSRCGLSQTMATVKLNT*VCPCLS
Trigger: TGACAAACAGGGACATACCAAAGTATTGAGTTTTAC...AGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp CCACTGACTTGTTCAAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAATGGTATACAGATGGTTaGGATAAAGATGGAATCGTA +
Preference number: 5 (lower is better)
Translates to: PLTCSKDLLNTVAAVLAKWYTDG*DKDGIV
Trigger: TACGATTCCATCTTTATCCAAACCATCTGTATACCA...TTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTTGAACAAGTCAGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp CTGTATTTCCATGTCTTTTCCACCTATGACCCCTTATTGACATGCTGGTTACTGTGGTATACAGATGGTTaGGATAAAGATGGAATCGTA +
Preference number: 5 (lower is better)
Translates to: LYFHVFSTYDPLLTCWLLWYTDG*DKDGIV
Trigger: TACGATTCCATCTTTATCCAAACCATCTGTATACCA...CAGTAACCAGCATGTCAATAAGGGGTCATAGGTGGAAAAGACATGGAAATACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp CACCTCCACAGAGGATTTGTTTATTACCAAGCACTTAGGGGATCATTTTTAATCCACTGTATACCACTTTaGACAAACCATGCTGGGATA +
Preference number: 5 (lower is better)
Translates to: HLHRGFVYYQALRGSFLIHCIPL*TNHAGI
Trigger: TATCCCAGCATGGTTTGTCAAAAGTGGTATACAGTG...GATTAAAAATGATCCCCTAAGTGCTTGGTAATAAACAAATCCTCTGTGGAGGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CAA 90 bp CTGTATTTCCATGTCTTTTCCACCTATGACCCCTTATTGACATGCTGGTTACTGCACAAACACAGATTCTaGAACAAATTTGACACAGTG +
Preference number: 5 (lower is better)
Translates to: LYFHVFSTYDPLLTCWLLHKHRF*NKFDTV
Trigger: CACTGTGTCAAATTTGTTCAAGAATCTGTGTTTGTG...CAGTAACCAGCATGTCAATAAGGGGTCATAGGTGGAAAAGACATGGAAATACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp CCTGGAATAAAATCCCTCGTCAACTTCAGATATCTCCATCAGTTCTTCTTGACCCACAAACACAGATTCTaGAACAAATTTGACACAGTG +
Preference number: 5 (lower is better)
Translates to: PGIKSLVNFRYLHQFFLTHKHRF*NKFDTV
Trigger: CACTGTGTCAAATTTGTTCAAGAATCTGTGTTTGTG...GGTCAAGAAGAACTGATGGAGATATCTGAAGTTGACGAGGGATTTTATTCCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp TCTTCAAAGAGAGAAGCTCAAGATTCTCACTTTGGGCTCTCTGAGTTTGTTTTCTGGTGTGATTTCAACTaGAATACACCTTGTACCTTC +
Preference number: 5 (lower is better)
Translates to: SSKREAQDSHFGLSEFVFWCDFN*NTPCTF
Trigger: GAAGGTACAAGGTGTATTCAAGTTGAAATCACACCA...GAAAACAAACTCAGAGAGCCCAAAGTGAGAATCTTGAGCTTCTCTCTTTGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp GATTTCAACTTGAATACACCTTGTACCTTCCTTATTAGATTTCATGGGACCATGACCTATGACCCCTTATaGACATGCTGGTTACTGCAT +
Preference number: 5 (lower is better)
Translates to: DFNLNTPCTFLIRFHGTMTYDPL*TCWLLH
Trigger: ATGCAGTAACCAGCATGTCAATAAGGGGTCATAGGT...CATGGTCCCATGAAATCTAATAAGGAAGGTACAAGGTGTATTCAAGTTGAAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp AATAAAATCCCTCGTCAACTTCAGATATCTCCATCAGTTCTTCTTGACCTGTTAAATTGTGACTACTGTTaGATAAACCCGACTGGCTGG +
Preference number: 5 (lower is better)
Translates to: NKIPRQLQISPSVLLDLLNCDYC*INPTGW
Trigger: CCAGCCAGTCGGGTTTATCAAACAGTAGTCACAATT...TAACAGGTCAAGAAGAACTGATGGAGATATCTGAAGTTGACGAGGGATTTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp ACCACTGACTTGTTCAAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAGGTTCTTTCCTATACTaGGCTTGTTACTACAATTGT +
Preference number: 5 (lower is better)
Translates to: TTDLFKGFTKYSRCGLSQGSFLY*ACYYNC
Trigger: ACAATTGTAGTAACAAGCCAAGTATAGGAAAGAACC...TTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTTGAACAAGTCAGTGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp ATGTGGGACTGTGACACCACTGACTTGTTCAAAGGATTTACTAAATACAGTCGCGGTTCTTTCCTATACTaGGCTTGTTACTACAATTGT +
Preference number: 5 (lower is better)
Translates to: MWDCDTTDLFKGFTKYSRGSFLY*ACYYNC
Trigger: ACAATTGTAGTAACAAGCCAAGTATAGGAAAGAACC...GCGACTGTATTTAGTAAATCCTTTGAACAAGTCAGTGGTGTCACAGTCCCACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp CCTGGAATAAAATCCCTCGTCAACTTCAGATATCTCCATCAGTTCTTCTTGACCTGTGACACCACTGACTaGTTCAAAGGATTTACTAAA +
Preference number: 5 (lower is better)
Translates to: PGIKSLVNFRYLHQFFLTCDTTD*FKGFTK
Trigger: TTTAGTAAATCCTTTGAACAAGTCAGTGGTGTCACA...GGTCAAGAAGAACTGATGGAGATATCTGAAGTTGACGAGGGATTTTATTCCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp GGGTTATGTGGGACTGTGACACCACTGACTTGTTCAAAGGATTTACTAAATACACTGATTGATGCTTCATaGGAAGTTCAGTTCTTTCTG +
Preference number: 5 (lower is better)
Translates to: GLCGTVTPLTCSKDLLNTLIDAS*EVQFFL
Trigger: CAGAAAGAACTGAACTTCCAATGAAGCATCAATCAG...TGTATTTAGTAAATCCTTTGAACAAGTCAGTGGTGTCACAGTCCCACATAACCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp GCAACCAGCAATGGCTCTGGATATAATTCTAGCTGGGCTCTGTATATAATATCACTGATTGATGCTTCATaGGAAGTTCAGTTCTTTCTG +
Preference number: 5 (lower is better)
Translates to: ATSNGSGYNSSWALYIISLIDAS*EVQFFL
Trigger: CAGAAAGAACTGAACTTCCAATGAAGCATCAATCAG...TGATATTATATACAGAGCCCAGCTAGAATTATATCCAGAGCCATTGCTGGTTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp TTCAAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATGGCTACTACCTGTCAAAATTTATaGTCACTGACAATCTTAGGG +
Preference number: 5 (lower is better)
Translates to: FKGFTKYSRCGLSQTMATTCQNL*SLTILG
Trigger: CCCTAAGATTGTCAGTGACAATAAATTTTGACAGGT...AGTAGCCATGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp CTGACTTGTTCAAAGGATTTACTAAATACAGTCGCTGCGGTCTTAGCCAAACCATCATACACATCATTTTaGTGTTTCCACATGCCTGTT +
Preference number: 5 (lower is better)
Translates to: LTCSKDLLNTVAAVLAKPSYTSF*CFHMPV
Trigger: AACAGGCATGTGGAAACACAAAAATGATGTGTATGA...TGGTTTGGCTAAGACCGCAGCGACTGTATTTAGTAAATCCTTTGAACAAGTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp TCAAAGAGAGAAGCTCAAGATTCTCACTTTGGGCTCTCTGAGTTTGTTTTCGAGTCATACACATCATTTTaGTGTTTCCACATGCCTGTT +
Preference number: 5 (lower is better)
Translates to: SKREAQDSHFGLSEFVFESYTSF*CFHMPV
Trigger: AACAGGCATGTGGAAACACAAAAATGATGTGTATGA...CTCGAAAACAAACTCAGAGAGCCCAAAGTGAGAATCTTGAGCTTCTCTCTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp CTGTCAGGAATACGGATGAAAGACCCAGGGTACTTTCATAAAGAAGCAAAGTTGTTATACAGTGGTATCTaGAGAGCTATGTTGCAAGAT +
Preference number: 5 (lower is better)
Translates to: LSGIRMKDPGYFHKEAKLLYSGI*RAMLQD
Trigger: ATCTTGCAACATAGCTCTCAAGATACCACTGTATAA...CAACTTTGCTTCTTTATGAAAGTACCCTGGGTCTTTCATCCGTATTCCTGACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp AGGGTTCCTATTAAGTTAATACAATATCAAGTTTCACTGCCCGATTGCCTTACAAGCTCATCTTCATCTTaGGATGAATACGAGTGGACC +
Preference number: 5 (lower is better)
Translates to: RVPIKLIQYQVSLPDCLTSSSSS*DEYEWT
Trigger: GGTCCACTCGTATTCATCCAAAGATGAAGATGAGCT...TGTAAGGCAATCGGGCAGTGAAACTTGATATTGTATTAACTTAATAGGAACCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CAA 90 bp GTTAACGTAACTCCGCTCTCCAGAAAATCAATTAGTGCAAATCATTTGAAGCAATGCAAGACCCCAATTTaGTGTGGAATCCTTCTCATG +
Preference number: 5 (lower is better)
Translates to: VNVTPLSRKSISANHLKQCKTPI*CGILLM
Trigger: CATGAGAAGGATTCCACACAAAATTGGGGTCTTGCA...TTGCTTCAAATGATTTGCACTAATTGATTTTCTGGAGAGCGGAGTTACGTTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp GATCTCTCAGCTCTGTCAGCTAACATTTCCCCAAACTTATTCTACAATGTTTCCGTCTGGGACAGTCCCTaGAAAAGTCTATTTTTGTTT +
Preference number: 5 (lower is better)
Translates to: DLSALSANISPNLFYNVSVWDSP*KSLFLF
Trigger: AAACAAAAATAGACTTTTCAAGGGACTGTCCCAGAC...GGAAACATTGTAGAATAAGTTTGGGGAAATGTTAGCTGACAGAGCTGAGAGATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp AATGATGACTTAAGTACATTTGCTTTACAGGGGAACCGCAACCATAGCCAAAAGCTGGAAGAGTGCATATaGTATAGGACAAAATACTGC +
Preference number: 5 (lower is better)
Translates to: NDDLSTFALQGNRNHSQKLEECI*YRTKYC
Trigger: GCAGTATTTTGTCCTATACAATATGCACTCTTCCAG...CTTTTGGCTATGGTTGCGGTTCCCCTGTAAAGCAAATGTACTTAAGTCATCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CAA 90 bp AAATGTTTCAGAGATAACAACAGAAATGCCTCTAGCCATCCCCTGGAATCATATAAGCTACAGAAATCTTaGCGATCTTCAGCAGAACAC +
Preference number: 5 (lower is better)
Translates to: KCFRDNNRNASSHPLESYKLQKS*RSSAEH
Trigger: GTGTTCTGCTGAAGATCGCAAAGATTTCTGTAGCTT...ATATGATTCCAGGGGATGGCTAGAGGCATTTCTGTTGTTATCTCTGAAACATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CAA 90 bp GATCTCTCAGCTCTGTCAGCTAACATTTCCCCAAACTTATTCTACAATGTTTCCGCTTGCTTGTTTGGTTaGTCCTTCTTTCAAACATGT +
Preference number: 5 (lower is better)
Translates to: DLSALSANISPNLFYNVSACLFG*SFFQTC
Trigger: ACATGTTTGAAAGAAGGACAAACCAAACAAGCAAGC...GGAAACATTGTAGAATAAGTTTGGGGAAATGTTAGCTGACAGAGCTGAGAGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CAA 90 bp CACCTCCACAGAGGATTTGTTTATTACCAAGCACTTAGGGGATCATTTTTAATCTTCACCACAGGGCCTTaGTTTAATATGTCTGTAGGA +
Preference number: 5 (lower is better)
Translates to: HLHRGFVYYQALRGSFLIFTTGP*FNMSVG
Trigger: TCCTACAGACATATTAAACAAAGGCCCTGTGGTGAA...GATTAAAAATGATCCCCTAAGTGCTTGGTAATAAACAAATCCTCTGTGGAGGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CAA 90 bp AGGGTTCCTATTAAGTTAATACAATATCAAGTTTCACTGCCCGATTGCCTTACAGTAATAAGGACAGCCTaGATGAAAGGAGGCCTGTAT +
Preference number: 5 (lower is better)
Translates to: RVPIKLIQYQVSLPDCLTVIRTA*MKGGLY
Trigger: ATACAGGCCTCCTTTCATCAAGGCTGTCCTTATTAC...TGTAAGGCAATCGGGCAGTGAAACTTGATATTGTATTAACTTAATAGGAACCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CAA 90 bp AGGGTTCCTATTAAGTTAATACAATATCAAGTTTCACTGCCCGATTGCCTTACAACAGGAAGCTTATTATaGCACACACAAGCATGGTGC +
Preference number: 5 (lower is better)
Translates to: RVPIKLIQYQVSLPDCLTTGSLL*HTQAWC
Trigger: GCACCATGCTTGTGTGTGCAATAATAAGCTTCCTGT...TGTAAGGCAATCGGGCAGTGAAACTTGATATTGTATTAACTTAATAGGAACCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CAA 90 bp ATCTCTCAGCTCTGTCAGCTAACATTTCCCCAAACTTATTCTACAATGTTTCCTACAGTAACTCTCTTCTaGGGCCTTTTACCCAGATTT +
Preference number: 5 (lower is better)
Translates to: ISQLCQLTFPQTYSTMFPTVTLF*GLLPRF
Trigger: AAATCTGGGTAAAAGGCCCAAGAAGAGAGTTACTGT...AGGAAACATTGTAGAATAAGTTTGGGGAAATGTTAGCTGACAGAGCTGAGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS TCA 90 bp AGTAACAGCCATATGAAACCTGTCTTTAAAATTCAGTGTTCCAGCTaGCACCTGAAGCAAAGCACAGTGACAAATCTAGATCTGTTTTTC +
Preference number: 5 (lower is better)
Translates to: SNSHMKPVFKIQCSS*HLKQSTVTNLDLFF
Trigger: GAAAAACAGATCTAGATTTGTCACTGTGCTTTGCTTCAGGTGTCAGCTGGAACACTGAATTTTAAAGACAGGTTTCATATGGCTGTTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680721.1
CDS CCA 90 bp AATTTTGGTAGTTTCATCCCAGAGATACATAGATCCATATTGGACTaGACTCCAGGATATGTTACTTTACCACTGAATCTGCTGTTAGAG +
Preference number: 5 (lower is better)
Translates to: NFGSFIPEIHRSILD*TPGYVTLPLNLLLE
Trigger: CTCTAACAGCAGATTCAGTGGTAAAGTAACATATCCTGGAGTCCAGTCCAATATGGATCTATGTATCTCTGGGATGAAACTACCAAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467005.6
CDS CCA 90 bp TTAGCAACCTTGAACAAATTTGACACAGTGACTGAAGAGAAACACTaGGCATGTAAGTTAAGGCAGCATTGTAACACAACAAAAGGAATG +
Preference number: 5 (lower is better)
Translates to: LATLNKFDTVTEEKH*ACKLRQHCNTTKGM
Trigger: CATTCCTTTTGTTGTGTTACAATGCTGCCTTAACTTACATGCCCAGTGTTTCTCTTCAGTCACTGTGTCAAATTTGTTCAAGGTTGCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679789.1
CDS-3UTR CAA 90 bp TGGTGTGATTTCAACTTGAATACACCTTGTACCTTCCTTATTAGATTTCATGGGCACTGTATACCACTTTaGACAAACCATGCTGGGATA +
Preference number: 5 (lower is better)
Translates to: WCDFNLNTPCTFLIRFHGHCIPL*TNHAGI
Trigger: TATCCCAGCATGGTTTGTCAAAAGTGGTATACAGTG...CCCATGAAATCTAATAAGGAAGGTACAAGGTGTATTCAAGTTGAAATCACACCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp AAATGTTTCAGAGATAACAACAGAAATGCCTCTAGCCATCCCCTGGAATCATATATTATTGTTGTCAGGTaGCTCATGTCTTTTCCACCT +
Preference number: 5 (lower is better)
Translates to: KCFRDNNRNASSHPLESYIIVVR*LMSFPP
Trigger: AGGTGGAAAAGACATGAGCAACCTGACAACAATAAT...ATATGATTCCAGGGGATGGCTAGAGGCATTTCTGTTGTTATCTCTGAAACATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409923.5
ENST00000440481.6
CDS-3UTR CAA 90 bp GGGTTATGTGGGACTGTGACACCACTGACTTGTTCAAAGGATTTACTAAATACATTATACAGTGGTATCTaGAGAGCTATGTTGCAAGAT +
Preference number: 5 (lower is better)
Translates to: GLCGTVTPLTCSKDLLNTLYSGI*RAMLQD
Trigger: ATCTTGCAACATAGCTCTCAAGATACCACTGTATAA...TGTATTTAGTAAATCCTTTGAACAAGTCAGTGGTGTCACAGTCCCACATAACCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp AATGATGACTTAAGTACATTTGCTTTACAGGGGAACCGCAACCATAGCCAAAAGTTATACAGTGGTATCTaGAGAGCTATGTTGCAAGAT +
Preference number: 5 (lower is better)
Translates to: NDDLSTFALQGNRNHSQKLYSGI*RAMLQD
Trigger: ATCTTGCAACATAGCTCTCAAGATACCACTGTATAA...CTTTTGGCTATGGTTGCGGTTCCCCTGTAAAGCAAATGTACTTAAGTCATCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp GTGAGACCACTGGGAATTCTACATATTAGACGAGTAATTTGTTTGCACTCTGATCCTAAGCACCTCAACTaGCTTAAAATGCCAATCTTA +
Preference number: 5 (lower is better)
Translates to: VRPLGILHIRRVICLHSDPKHLN*LKMPIL
Trigger: TAAGATTGGCATTTTAAGCAAGTTGAGGTGCTTAGG...ATCAGAGTGCAAACAAATTACTCGTCTAATATGTAGAATTCCCAGTGGTCTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp GTGAGACCACTGGGAATTCTACATATTAGACGAGTAATTTGTTTGCACTCTGATGTCTGGGACAGTCCCTaGAAAAGTCTATTTTTGTTT +
Preference number: 5 (lower is better)
Translates to: VRPLGILHIRRVICLHSDVWDSP*KSLFLF
Trigger: AAACAAAAATAGACTTTTCAAGGGACTGTCCCAGAC...ATCAGAGTGCAAACAAATTACTCGTCTAATATGTAGAATTCCCAGTGGTCTCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS TCA 90 bp CTAGCTGGGCTAAGGCAAAATAAATCCCTGTTAACATTTGCACCATaGATCCTGAAGAAACTGGTATCCTGCTACTTATACCTTTATATT +
Preference number: 5 (lower is better)
Translates to: LAGLRQNKSLLTFAP*ILKKLVSCYLYLYI
Trigger: AATATAAAGGTATAAGTAGCAGGATACCAGTTTCTTCAGGATTCATGGTGCAAATGTTAACAGGGATTTATTTTGCCTTAGCCCAGCTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681766.1
CDS-3UTR CAA 90 bp CACCTCCACAGAGGATTTGTTTATTACCAAGCACTTAGGGGATCATTTTTAATCGTAAAACTCAATACTTaGGTATGTCCCTGTTTGTCA +
Preference number: 5 (lower is better)
Translates to: HLHRGFVYYQALRGSFLIVKLNT*VCPCLS
Trigger: TGACAAACAGGGACATACCAAAGTATTGAGTTTTAC...GATTAAAAATGATCCCCTAAGTGCTTGGTAATAAACAAATCCTCTGTGGAGGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CAA 90 bp GCAAGATTTACACTGATTTCCAGGAAGTCTTCCAATGACGTATGCTCTGAATTAGTAAAACTCAATACTTaGGTATGTCCCTGTTTGTCA +
Preference number: 5 (lower is better)
Translates to: ARFTLISRKSSNDVCSELVKLNT*VCPCLS
Trigger: TGACAAACAGGGACATACCAAAGTATTGAGTTTTAC...TAATTCAGAGCATACGTCATTGGAAGACTTCCTGGAAATCAGTGTAAATCTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CAA 90 bp ATCTCTCAGCTCTGTCAGCTAACATTTCCCCAAACTTATTCTACAATGTTTCCTCACAAACACAGATTCTaGAACAAATTTGACACAGTG +
Preference number: 5 (lower is better)
Translates to: ISQLCQLTFPQTYSTMFPHKHRF*NKFDTV
Trigger: CACTGTGTCAAATTTGTTCAAGAATCTGTGTTTGTG...AGGAAACATTGTAGAATAAGTTTGGGGAAATGTTAGCTGACAGAGCTGAGAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp GCAAGATTTACACTGATTTCCAGGAAGTCTTCCAATGACGTATGCTCTGAATTACACAAACACAGATTCTaGAACAAATTTGACACAGTG +
Preference number: 5 (lower is better)
Translates to: ARFTLISRKSSNDVCSELHKHRF*NKFDTV
Trigger: CACTGTGTCAAATTTGTTCAAGAATCTGTGTTTGTG...TAATTCAGAGCATACGTCATTGGAAGACTTCCTGGAAATCAGTGTAAATCTTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CAA 90 bp GCAAGATTTACACTGATTTCCAGGAAGTCTTCCAATGACGTATGCTCTGAATTAGGTTCTTTCCTATACTaGGCTTGTTACTACAATTGT +
Preference number: 5 (lower is better)
Translates to: ARFTLISRKSSNDVCSELGSFLY*ACYYNC
Trigger: ACAATTGTAGTAACAAGCCAAGTATAGGAAAGAACC...TAATTCAGAGCATACGTCATTGGAAGACTTCCTGGAAATCAGTGTAAATCTTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CAA 90 bp TTAACAGTAACTCTCTTCTTGGGCCTTTTACCCAGATTTGGCAAATTCCATAATCCTAAGCACCTCAACTaGCTTAAAATGCCAATCTTA +
Preference number: 5 (lower is better)
Translates to: LTVTLFLGLLPRFGKFHNPKHLN*LKMPIL
Trigger: TAAGATTGGCATTTTAAGCAAGTTGAGGTGCTTAGG...ATTATGGAATTTGCCAAATCTGGGTAAAAGGCCCAAGAAGAGAGTTACTGTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CAA 90 bp GTGAGACCACTGGGAATTCTACATATTAGACGAGTAATTTGTTTGCACTCTGATAATCACTTGGGAACCTaGTTAAGAATGCAAATTCTG +
Preference number: 5 (lower is better)
Translates to: VRPLGILHIRRVICLHSDNHLGT*LRMQIL
Trigger: CAGAATTTGCATTCTTAACAAGGTTCCCAAGTGATT...ATCAGAGTGCAAACAAATTACTCGTCTAATATGTAGAATTCCCAGTGGTCTCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp TTTCCAAAGTCCAGCAGTAGGGTAAATCAGCTTTACAGCCTATTATACCTTAATCTGGTTAAAATACTTTaGTATTGGGAGTCCCCAAGA +
Preference number: 5 (lower is better)
Translates to: FPKSSSRVNQLYSLLYLNLVKIL*YWESPR
Trigger: TCTTGGGGACTCCCAATACAAAAGTATTTTAACCAG...ATTAAGGTATAATAGGCTGTAAAGCTGATTTACCCTACTGCTGGACTTTGGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432176.7
CDS-3UTR CAA 90 bp AATAAAATCCCTCGTCAACTTCAGATATCTCCATCAGTTCTTCTTGACCTGTTATTGGTATGTCCCTGTTaGTCAACTATTTCCAAATTG +
Preference number: 5 (lower is better)
Translates to: NKIPRQLQISPSVLLDLLLVCPC*STISKL
Trigger: CAATTTGGAAATAGTTGACAAACAGGGACATACCAA...TAACAGGTCAAGAAGAACTGATGGAGATATCTGAAGTTGACGAGGGATTTTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681402.1
CDS-3UTR CAA 90 bp TTTCCAAAGTCCAGCAGTAGGGTAAATCAGCTTTACAGCCTATTATACCTTAATGTAAAACTCAATACTTaGGTATGTCCCTGTTTGTCA +
Preference number: 5 (lower is better)
Translates to: FPKSSSRVNQLYSLLYLNVKLNT*VCPCLS
Trigger: TGACAAACAGGGACATACCAAAGTATTGAGTTTTAC...ATTAAGGTATAATAGGCTGTAAAGCTGATTTACCCTACTGCTGGACTTTGGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS-3UTR CAA 90 bp AATAAAATCCCTCGTCAACTTCAGATATCTCCATCAGTTCTTCTTGACCTGTTAGTAAAACTCAATACTTaGGTATGTCCCTGTTTGTCA +
Preference number: 5 (lower is better)
Translates to: NKIPRQLQISPSVLLDLLVKLNT*VCPCLS
Trigger: TGACAAACAGGGACATACCAAAGTATTGAGTTTTAC...TAACAGGTCAAGAAGAACTGATGGAGATATCTGAAGTTGACGAGGGATTTTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp GATTTCAACTTGAATACACCTTGTACCTTCCTTATTAGATTTCATGGGACCATGTGGTATACAGATGGTTaGGATAAAGATGGAATCGTA +
Preference number: 5 (lower is better)
Translates to: DFNLNTPCTFLIRFHGTMWYTDG*DKDGIV
Trigger: TACGATTCCATCTTTATCCAAACCATCTGTATACCA...CATGGTCCCATGAAATCTAATAAGGAAGGTACAAGGTGTATTCAAGTTGAAATC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679789.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp AGGGTTCCTATTAAGTTAATACAATATCAAGTTTCACTGCCCGATTGCCTTACATGGTATACAGATGGTTaGGATAAAGATGGAATCGTA +
Preference number: 5 (lower is better)
Translates to: RVPIKLIQYQVSLPDCLTWYTDG*DKDGIV
Trigger: TACGATTCCATCTTTATCCAAACCATCTGTATACCA...TGTAAGGCAATCGGGCAGTGAAACTTGATATTGTATTAACTTAATAGGAACCCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp AGGGTTCCTATTAAGTTAATACAATATCAAGTTTCACTGCCCGATTGCCTTACAGGTTCTTTCCTATACTaGGCTTGTTACTACAATTGT +
Preference number: 5 (lower is better)
Translates to: RVPIKLIQYQVSLPDCLTGSFLY*ACYYNC
Trigger: ACAATTGTAGTAACAAGCCAAGTATAGGAAAGAACC...TGTAAGGCAATCGGGCAGTGAAACTTGATATTGTATTAACTTAATAGGAACCCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS-3UTR CAA 90 bp GTTAACGTAACTCCGCTCTCCAGAAAATCAATTAGTGCAAATCATTTGAAGCAAACCTGTCAAAATTTATaGTCACTGACAATCTTAGGG +
Preference number: 5 (lower is better)
Translates to: VNVTPLSRKSISANHLKQTCQNL*SLTILG
Trigger: CCCTAAGATTGTCAGTGACAATAAATTTTGACAGGT...TTGCTTCAAATGATTTGCACTAATTGATTTTCTGGAGAGCGGAGTTACGTTAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000432176.7
ENST00000440481.6
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
CDS TCA 90 bp CTAAACTCCGTAAGGCAAAATAAATCCCTGTTAACATTTGCACCATaGATCCTGAAGAAACTGGTATCCTGCTACTTATACCTTTATATT +
Preference number: 5 (lower is better)
Translates to: LNSVRQNKSLLTFAP*ILKKLVSCYLYLYI
Trigger: AATATAAAGGTATAAGTAGCAGGATACCAGTTTCTTCAGGATTCATGGTGCAAATGTTAACAGGGATTTATTTTGCCTTACGGAGTTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681079.1
CDS CCA 90 bp TATACATCAGTTAGGGAATATCAAATTTGTGTGGTGCCTCACACATaGTGTGAGTTCATGTTAGTCATGTATTTCAGATACACATATTTG +
Preference number: 5 (lower is better)
Translates to: YTSVREYQICVVPHT*CEFMLVMYFRYTYL
Trigger: CAAATATGTGTATCTGAAATACATGACTAACATGAACTCACACCATGTGTGAGGCACCACACAAATTTGATATTCCCTAACTGATGTATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467005.6
CDS-3UTR CAA 90 bp ACTTTCATAAAGAAGCAAAGTTGTATTTCCAGGTTCACTAGGTTATGGGAGAAATCATACACATCATTTTaGTGTTTCCACATGCCTGTT +
Preference number: 5 (lower is better)
Translates to: TFIKKQSCISRFTRLWEKSYTSF*CFHMPV
Trigger: AACAGGCATGTGGAAACACAAAAATGATGTGTATGA...TTTCTCCCATAACCTAGTGAACCTGGAAATACAACTTTGCTTCTTTATGAAAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000679789.1
ENST00000679826.1
ENST00000681237.1
ENST00000681402.1
ENST00000681766.1
CDS CAA 90 bp GAGGGCTCAGCAGCACCTGAGTCCTGCAGGCTGGCAAGGCTCCTCTaGCTATTCCACCACCCCATCTCGGGGCAGCCACAGGGCAGACAC +
Preference number: 6 (lower is better)
Translates to: EGSAAPESCRLARLL*LFHHPISGQPQGRH
Trigger: GTGTCTGCCCTGTGGCTGCCCCGAGATGGGGTGGTGGAATAGCAAGAGGAGCCTTGCCAGCCTGCAGGACTCAGGTGCTGCTGAGCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421730.1
CDS GCA 72 bp TCGACTCGTGAGGCTCTCAGCGACAGCGACGGAGGCTaGTCTGCTTCCTCCCGAGTAGCAGCACCACCTGCT +
Preference number: 6 (lower is better)
Translates to: STREALSDSDGG*SASSRVAAPPA
Trigger: AGCAGGTGGTGCTGCTACTCGGGAGGAAGCAGAGCAGCCTCCGTCGCTGTCGCTGAGAGCCTCACGAGTCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000409763.1
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000465661.2
ENST00000467005.6
ENST00000477349.5
ENST00000679789.1
ENST00000679826.1
ENST00000681079.1
ENST00000681237.1
ENST00000681402.1
ENST00000681468.1
ENST00000681766.1
CDS GCA 72 bp CAGCACCTGAGTCCTGCAGGCTGGCAAGGCTCCTCTTaGTATTCCACCACCCCATCTCGGGGCAGCCACAGG +
Preference number: 6 (lower is better)
Translates to: QHLSPAGWQGSS*YSTTPSRGSHR
Trigger: CCTGTGGCTGCCCCGAGATGGGGTGGTGGAATAGCAAGAGGAGCCTTGCCAGCCTGCAGGACTCAGGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421730.1
CDS CAA 72 bp GCAGCACCTGAGTCCTGCAGGCTGGCAAGGCTCCTCTaGCTATTCCACCACCCCATCTCGGGGCAGCCACAG +
Preference number: 6 (lower is better)
Translates to: AAPESCRLARLL*LFHHPISGQPQ
Trigger: CTGTGGCTGCCCCGAGATGGGGTGGTGGAATAGCAAGAGGAGCCTTGCCAGCCTGCAGGACTCAGGTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421730.1
CDS CCA 72 bp TTTCTGCCACCCGTGACCGCCCAGCACAATATGCTCTaGCAGGGGCCATTATTAGCCCATAAGTTGCTGCAC +
Preference number: 6 (lower is better)
Translates to: FLPPVTAQHNML*QGPLLAHKLLH
Trigger: GTGCAGCAACTTATGGGCTAATAATGGCCCCTGCCAGAGCATATTGTGCTGGGCGGTCACGGGTGGCAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421730.1
CDS CCA 72 bp CCCCAGCTTCTGCACCACACACAGGTGTTGCTACCATaGAGCACTTTGAGCGGAAAGTGCTGGAGGTGCAAA +
Preference number: 6 (lower is better)
Translates to: PQLLHHTQVLLP*STLSGKCWRCK
Trigger: TTTGCACCTCCAGCACTTTCCGCTCAAAGTGCTCCATGGTAGCAACACCTGTGTGTGGTGCAGAAGCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421730.1
CDS CAA 72 bp GCGGAAAGTGCTGGAGGTGCAAATGTTTCCTGTGGGTaGTCAAAAGAGAGGCCAGTAGTTTCTGCCACCCGT +
Preference number: 6 (lower is better)
Translates to: AESAGGANVSCG*SKERPVVSATR
Trigger: ACGGGTGGCAGAAACTACTGGCCTCTCTTTTGACAACCCACAGGAAACATTTGCACCTCCAGCACTTTCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421730.1
CDS TCA 72 bp TGCACCACACACAGGTGTTGCTACCATGGAGCACTTTaGGCGGAAAGTGCTGGAGGTGCAAATGTTTCCTGT +
Preference number: 6 (lower is better)
Translates to: CTTHRCCYHGAL*AESAGGANVSC
Trigger: ACAGGAAACATTTGCACCTCCAGCACTTTCCGCTCAAAGTGCTCCATGGTAGCAACACCTGTGTGTGGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421730.1
CDS GCA 72 bp CAGGTGTTGCTACCATGGAGCACTTTGAGCGGAAAGTaGTGGAGGTGCAAATGTTTCCTGTGGGTTGTCAAA +
Preference number: 6 (lower is better)
Translates to: QVLLPWSTLSGK*WRCKCFLWVVK
Trigger: TTTGACAACCCACAGGAAACATTTGCACCTCCAGCACTTTCCGCTCAAAGTGCTCCATGGTAGCAACACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421730.1
CDS CAA 72 bp CTCTTGCCCCTGATTCCACCCCAACTCCTAATTCGTTaGGATCTTGATTCAATCGCCAACTTCCTCAGTCCC +
Preference number: 6 (lower is better)
Translates to: LLPLIPPQLLIR*DLDSIANFLSP
Trigger: GGGACTGAGGAAGTTGGCGATTGAATCAAGATCCAAACGAATTAGGAGTTGGGGTGGAATCAGGGGCAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467005.6
ENST00000681468.1
CDS TCA 72 bp GGATCTGTGGCTGTTTCCTGCACACCCTGTATATGCTaGGCATCAATCTCTCCTAGTGTTCTGCCTTTTTCC +
Preference number: 6 (lower is better)
Translates to: GSVAVSCTPCIC*ASISPSVLPFS
Trigger: GGAAAAAGGCAGAACACTAGGAGAGATTGATGCTCAGCATATACAGGGTGTGCAGGAAACAGCCACAGATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000498833.1
CDS CCA 72 bp GTGTTGCTACCATGGAGCACTTTGAGCGGAAAGTGCTaGAGGTGCAAATGTTTCCTGTGGGTTGTCAAAAGA +
Preference number: 6 (lower is better)
Translates to: VLLPWSTLSGKC*RCKCFLWVVKR
Trigger: TCTTTTGACAACCCACAGGAAACATTTGCACCTCCAGCACTTTCCGCTCAAAGTGCTCCATGGTAGCAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421730.1
CDS CCA 72 bp AACCATGCTGGGATAGTGCACTCTCAGTCAGAGCCATaGACCCAATGCTGGAAGGCTAGAGAAAAGACATTT +
Preference number: 6 (lower is better)
Translates to: NHAGIVHSQSEP*TQCWKAREKTF
Trigger: AAATGTCTTTTCTCTAGCCTTCCAGCATTGGGTCCATGGCTCTGACTGAGAGTGCACTATCCCAGCATGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680721.1
CDS CAA 72 bp CTTACAGATTTTTGCCTCCTGATCTCTGGCAAGCCTTaGCTCTCAGTTCTAGGATCTGTGGCTGTTTCCTGC +
Preference number: 6 (lower is better)
Translates to: LTDFCLLISGKP*LSVLGSVAVSC
Trigger: GCAGGAAACAGCCACAGATCCTAGAACTGAGAGCAAAGGCTTGCCAGAGATCAGGAGGCAAAAATCTGTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409923.5
ENST00000440481.6
CDS CAA 72 bp GCCAGTTCTGGGGGCTTGAACATGTCCAAAACATCCTaGTCTTATAGAAACCTGCTGGAAAGCGCTGTAGTC +
Preference number: 6 (lower is better)
Translates to: ASSGGLNMSKTS*SYRNLLESAVV
Trigger: GACTACAGCGCTTTCCAGCAGGTTTCTATAAGACAAGGATGTTTTGGACATGTTCAAGCCCCCAGAACTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421730.1
CDS CAA 90 bp GGGCAAGAGGAAAGACTGGGAAAGGCACTAGCCGGGCTAAACTATTaGCCATTCTTTAAATGCCTTGCATTTTCTGAGCCTCCGTATACT +
Preference number: 6 (lower is better)
Translates to: GQEERLGKALAGLNY*PFFKCLAFSEPPYT
Trigger: AGTATACGGAGGCTCAGAAAATGCAAGGCATTTAAAGAATGGCAAATAGTTTAGCCCGGCTAGTGCCTTTCCCAGTCTTTCCTCTTGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467005.6
CDS CAA 72 bp ATTTCAGATTTTTGCCTCCTGATCTCTGGCAAGCCTTaGCTCTCAGTTCTAGGATCTGTGGCTGTTTCCTGC +
Preference number: 6 (lower is better)
Translates to: ISDFCLLISGKP*LSVLGSVAVSC
Trigger: GCAGGAAACAGCCACAGATCCTAGAACTGAGAGCAAAGGCTTGCCAGAGATCAGGAGGCAAAAATCTGAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498833.1
CDS CAA 90 bp ATCATTTTTCTTACAGATTTTTGCCTCCTGATCTCTGGCAAGCCTTaGCTCTCAGTTCTAGGATCTGTGGCTGTTTCCTGCACACCCTGT +
Preference number: 6 (lower is better)
Translates to: IIFLTDFCLLISGKP*LSVLGSVAVSCTPC
Trigger: ACAGGGTGTGCAGGAAACAGCCACAGATCCTAGAACTGAGAGCAAAGGCTTGCCAGAGATCAGGAGGCAAAAATCTGTAAGAAAAATGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409923.5
ENST00000440481.6
CDS GCA 72 bp GAAGAGCTTCAATGCATCCACTGCTATGCACATTTCTaGTGGCTGAGACTGCAAGGTAGCACCAAATTAGTT +
Preference number: 6 (lower is better)
Translates to: EELQCIHCYAHF*WLRLQGSTKLV
Trigger: AACTAATTTGGTGCTACCTTGCAGTCTCAGCCAGCAGAAATGTGCATAGCAGTGGATGCATTGAAGCTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000409763.1
ENST00000409923.5
ENST00000432176.7
ENST00000440481.6
ENST00000465661.2
ENST00000477349.5
ENST00000679789.1
ENST00000679826.1
ENST00000681079.1
ENST00000681402.1
ENST00000681766.1
CDS CAA 72 bp CTGGTAATGTCAGAAGGGCAAGCAAATGTGGACTATTaGGAAACCTTTCACAATTCTCCCGACGGGGGAAAA +
Preference number: 6 (lower is better)
Translates to: LVMSEGQANVDY*ETFHNSPDGGK
Trigger: TTTTCCCCCGTCGGGAGAATTGTGAAAGGTTTCCAAATAGTCCACATTTGCTTGCCCTTCTGACATTACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679826.1
CDS GCA 72 bp GATAAGAATTTTTATCCCCACAGTATACCGATTCTGTaGTGTCAGCATCTCCCTTTGAGGATGAGGTCCACT +
Preference number: 6 (lower is better)
Translates to: DKNFYPHSIPIL*CQHLPLRMRST
Trigger: AGTGGACCTCATCCTCAAAGGGAGATGCTGACAGCACAGAATCGGTATACTGTGGGGATAAAAATTCTTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680721.1
CDS CAA 72 bp GAAAGACTGGGAAAGGCACTAGCCGGGCTAAACTATTaGCCATTCTTTAAATGCCTTGCATTTTCTGAGCCT +
Preference number: 6 (lower is better)
Translates to: ERLGKALAGLNY*PFFKCLAFSEP
Trigger: AGGCTCAGAAAATGCAAGGCATTTAAAGAATGGCAAATAGTTTAGCCCGGCTAGTGCCTTTCCCAGTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467005.6
CDS CAA 72 bp AGCTTCCTAGTCTTCTTGCATTCCCCATCTTTTCATTaGCCAATCTATCCTCCACATAGCCACCTTCCTAAC +
Preference number: 6 (lower is better)
Translates to: SFLVFLHSPSFH*PIYPPHSHLPN
Trigger: GTTAGGAAGGTGGCTATGTGGAGGATAGATTGGCAAATGAAAAGATGGGGAATGCAAGAAGACTAGGAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467005.6
CDS GCA 72 bp GCTCATGTCTTTTCCACCTATGACCCCTTATTGACATaGTGGTTACTGCATTTCTTGATATTCGAGAGGAAG +
Preference number: 6 (lower is better)
Translates to: AHVFSTYDPLLT*WLLHFLIFERK
Trigger: CTTCCTCTCGAATATCAAGAAATGCAGTAACCAGCATGTCAATAAGGGGTCATAGGTGGAAAAGACATGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000498833.1
CDS GCA 72 bp GACCATGTCTTTTCCACCTATGACCCCTTATTGACATaGTGGTTACTGCATTTCTTGATATTCGAGAGGAAG +
Preference number: 6 (lower is better)
Translates to: DHVFSTYDPLLT*WLLHFLIFERK
Trigger: CTTCCTCTCGAATATCAAGAAATGCAGTAACCAGCATGTCAATAAGGGGTCATAGGTGGAAAAGACATGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465661.2
CDS CCA 72 bp CCTTGCCACCTGGAAAACTTGTGCTTATCCGTAGACTaGATTAAGGATTGCCTTGAAACCATGTGTTTACTT +
Preference number: 6 (lower is better)
Translates to: PCHLENLCLSVD*IKDCLETMCLL
Trigger: AAGTAAACACATGGTTTCAAGGCAATCCTTAATCCAGTCTACGGATAAGCACAAGTTTTCCAGGTGGCAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467005.6
CDS CAA 72 bp GTTTATTCCATCCTCCATCATTTTTCTTACAGATTTTaGCCTCCTGATCTCTGGCAAGCCTTTGCTCTCAGT +
Preference number: 6 (lower is better)
Translates to: VYSILHHFSYRF*PPDLWQAFALS
Trigger: ACTGAGAGCAAAGGCTTGCCAGAGATCAGGAGGCAAAAATCTGTAAGAAAAATGATGGAGGATGGAATAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409923.5
ENST00000440481.6
CDS CAA 72 bp GCATGGAATATTCTTTTACCTTGCCACCTGGAAAACTaGTGCTTATCCGTAGACTGGATTAAGGATTGCCTT +
Preference number: 6 (lower is better)
Translates to: AWNILLPCHLEN*CLSVDWIKDCL
Trigger: AAGGCAATCCTTAATCCAGTCTACGGATAAGCACAAGTTTTCCAGGTGGCAAGGTAAAAGAATATTCCATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467005.6
CDS CAA 90 bp TCCCTCAATTTTGGTAGTTTCATCCCAGAGATACATAGATCCATATaGGACTGGACTCCAGGATATGTTACTTTACCACTGAATCTGCTG +
Preference number: 6 (lower is better)
Translates to: SLNFGSFIPEIHRSI*DWTPGYVTLPLNLL
Trigger: CAGCAGATTCAGTGGTAAAGTAACATATCCTGGAGTCCAGTCCAATATGGATCTATGTATCTCTGGGATGAAACTACCAAAATTGAGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467005.6
CDS CAA 90 bp CCTCCAAAAGAGGTTAACTACTCAAAAGAAGAGCCTCCCTCAATTTaGGTAGTTTCATCCCAGAGATACATAGATCCATATTGGACTGGA +
Preference number: 6 (lower is better)
Translates to: PPKEVNYSKEEPPSI*VVSSQRYIDPYWTG
Trigger: TCCAGTCCAATATGGATCTATGTATCTCTGGGATGAAACTACCAAAATTGAGGGAGGCTCTTCTTTTGAGTAGTTAACCTCTTTTGGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467005.6
CDS TCA 72 bp TTATTGTTGTCAGGTTGCTCATGTCTTTTCCACCTATaGCCCCTTATTGACATGCTGGTTACTGCATTTCTT +
Preference number: 6 (lower is better)
Translates to: LLLSGCSCLFHL*PLIDMLVTAFL
Trigger: AAGAAATGCAGTAACCAGCATGTCAATAAGGGGTCATAGGTGGAAAAGACATGAGCAACCTGACAACAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409923.5
ENST00000440481.6
ENST00000498833.1
CDS GCA 72 bp TTTATTCCATCCTCCATCATTTTTCTTACAGATTTTTaGCTCCTGATCTCTGGCAAGCCTTTGCTCTCAGTT +
Preference number: 6 (lower is better)
Translates to: FIPSSIIFLTDF*LLISGKPLLSV
Trigger: AACTGAGAGCAAAGGCTTGCCAGAGATCAGGAGGCAAAAATCTGTAAGAAAAATGATGGAGGATGGAATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409923.5
ENST00000440481.6
CDS GCA 72 bp TGGAATATTCTTTTACCTTGCCACCTGGAAAACTTGTaGTTATCCGTAGACTGGATTAAGGATTGCCTTGAA +
Preference number: 6 (lower is better)
Translates to: WNILLPCHLENL*LSVDWIKDCLE
Trigger: TTCAAGGCAATCCTTAATCCAGTCTACGGATAAGCACAAGTTTTCCAGGTGGCAAGGTAAAAGAATATTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467005.6
CDS CCA 72 bp AGTTTCATCCCAGAGATACATAGATCCATATTGGACTaGACTCCAGGATATGTTACTTTACCACTGAATCTG +
Preference number: 6 (lower is better)
Translates to: SFIPEIHRSILD*TPGYVTLPLNL
Trigger: CAGATTCAGTGGTAAAGTAACATATCCTGGAGTCCAGTCCAATATGGATCTATGTATCTCTGGGATGAAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467005.6
CDS CAA 72 bp TTTGGTAGTTTCATCCCAGAGATACATAGATCCATATaGGACTGGACTCCAGGATATGTTACTTTACCACTG +
Preference number: 6 (lower is better)
Translates to: FGSFIPEIHRSI*DWTPGYVTLPL
Trigger: CAGTGGTAAAGTAACATATCCTGGAGTCCAGTCCAATATGGATCTATGTATCTCTGGGATGAAACTACCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467005.6
CDS TCA 72 bp CATATGAAACCTGTCTTTAAAATTCAGTGTTCCAGCTaGCACCTGAAGCAAAGCACAGTGACAAATCTAGAT +
Preference number: 6 (lower is better)
Translates to: HMKPVFKIQCSS*HLKQSTVTNLD
Trigger: ATCTAGATTTGTCACTGTGCTTTGCTTCAGGTGTCAGCTGGAACACTGAATTTTAAAGACAGGTTTCATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680721.1
CDS CCA 72 bp GTTAGGGAATATCAAATTTGTGTGGTGCCTCACACATaGTGTGAGTTCATGTTAGTCATGTATTTCAGATAC +
Preference number: 6 (lower is better)
Translates to: VREYQICVVPHT*CEFMLVMYFRY
Trigger: GTATCTGAAATACATGACTAACATGAACTCACACCATGTGTGAGGCACCACACAAATTTGATATTCCCTAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467005.6
CDS TCA 72 bp ACCTTCCTTATTAGATTTCATGGGACCATGAGGCAATaGAGCCTTTATTGCATTAGCAACCTTGAACAAATT +
Preference number: 6 (lower is better)
Translates to: TFLIRFHGTMRQ*SLYCISNLEQI
Trigger: AATTTGTTCAAGGTTGCTAATGCAATAAAGGCTTCATTGCCTCATGGTCCCATGAAATCTAATAAGGAAGGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679789.1
CDS TCA 72 bp CTAAGGCAAAATAAATCCCTGTTAACATTTGCACCATaGATCCTGAAGAAACTGGTATCCTGCTACTTATAC +
Preference number: 6 (lower is better)
Translates to: LRQNKSLLTFAP*ILKKLVSCYLY
Trigger: GTATAAGTAGCAGGATACCAGTTTCTTCAGGATTCATGGTGCAAATGTTAACAGGGATTTATTTTGCCTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681766.1
CDS TCA 72 bp GTAAGGCAAAATAAATCCCTGTTAACATTTGCACCATaGATCCTGAAGAAACTGGTATCCTGCTACTTATAC +
Preference number: 6 (lower is better)
Translates to: VRQNKSLLTFAP*ILKKLVSCYLY
Trigger: GTATAAGTAGCAGGATACCAGTTTCTTCAGGATTCATGGTGCAAATGTTAACAGGGATTTATTTTGCCTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681079.1