RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM118B (Homo sapiens)

Ensembl gene IDs: ENSG00000197798

Ensembl transcript IDs: ENST00000360194.8, ENST00000525338.1, ENST00000525728.5, ENST00000527247.5, ENST00000528985.5, ENST00000529731.5, ENST00000530043.5, ENST00000531935.1, ENST00000533050.6, ENST00000627851.2

Found 258 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGAGCTGCAGCCGGTCAGTGGAAGTATCACATTGGTGTGCTGTGTaGACACAAGCATGTCTAGCCTGGGGAGTGGGTTGGGAGCTGCAT +
Preference number: 1 (lower is better)
Translates to: QSCSRSVEVSHWCAV*TQACLAWGVGWELH
Trigger: ATGCAGCTCCCAACCCACTCCCCAGGCTAGACATGCTTGTGTCCACACAGCACACCAATGTGATACTTCCACTGACCGGCTGCAGCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
3UTR GCA 90 bp CTTCATGCAGAGCTGCAGCCGGTCAGTGGAAGTATCACATTGGTGTaGTGTGTGGACACAAGCATGTCTAGCCTGGGGAGTGGGTTGGGA +
Preference number: 1 (lower is better)
Translates to: LHAELQPVSGSITLV*CVDTSMSSLGSGLG
Trigger: TCCCAACCCACTCCCCAGGCTAGACATGCTTGTGTCCACACAGCACACCAATGTGATACTTCCACTGACCGGCTGCAGCTCTGCATGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
3UTR CCA 90 bp GAGTCCTTCATGCAGAGCTGCAGCCGGTCAGTGGAAGTATCACATTaGTGTGCTGTGTGGACACAAGCATGTCTAGCCTGGGGAGTGGGT +
Preference number: 1 (lower is better)
Translates to: ESFMQSCSRSVEVSH*CAVWTQACLAWGVG
Trigger: ACCCACTCCCCAGGCTAGACATGCTTGTGTCCACACAGCACACCAATGTGATACTTCCACTGACCGGCTGCAGCTCTGCATGAAGGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
3UTR CCA 90 bp GAAGTATCACATTGGTGTGCTGTGTGGACACAAGCATGTCTAGCCTaGGGAGTGGGTTGGGAGCTGCATTTGGGTCCTGCTGTCGCTTTT +
Preference number: 1 (lower is better)
Translates to: EVSHWCAVWTQACLA*GVGWELHLGPAVAF
Trigger: AAAAGCGACAGCAGGACCCAAATGCAGCTCCCAACCCACTCCCCAGGCTAGACATGCTTGTGTCCACACAGCACACCAATGTGATACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
3UTR CAA 90 bp CGAGTCCTTCATGCAGAGCTGCAGCCGGTCAGTGGAAGTATCACATaGGTGTGCTGTGTGGACACAAGCATGTCTAGCCTGGGGAGTGGG +
Preference number: 2 (lower is better)
Translates to: RVLHAELQPVSGSIT*VCCVDTSMSSLGSG
Trigger: CCCACTCCCCAGGCTAGACATGCTTGTGTCCACACAGCACACCAATGTGATACTTCCACTGACCGGCTGCAGCTCTGCATGAAGGACTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
3UTR CAA 90 bp TGGACACAAGCATGTCTAGCCTGGGGAGTGGGTTGGGAGCTGCATTaGGGTCCTGCTGTCGCTTTTATTCTTGAACTTGAACAGGCGGCA +
Preference number: 2 (lower is better)
Translates to: WTQACLAWGVGWELH*GPAVAFILELEQAA
Trigger: TGCCGCCTGTTCAAGTTCAAGAATAAAAGCGACAGCAGGACCCAAATGCAGCTCCCAACCCACTCCCCAGGCTAGACATGCTTGTGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
3UTR-3UTR TCA 90 bp GTGTGCTGTGTGGACACAAGCATGTCTAGCCTGGGGAGTGGGTTGGGAGCTGCAAAGAACCAGGTGGTATaGAGGATTACGCTGCAACAT +
Preference number: 2 (lower is better)
Translates to: VCCVDTSMSSLGSGLGAAKNQVV*RITLQH
Trigger: ATGTTGCAGCGTAATCCTTCATACCACCTGGTTCTT...TGCAGCTCCCAACCCACTCCCCAGGCTAGACATGCTTGTGTCCACACAGCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
3UTR-3UTR CCA 90 bp GGGAGCTGCATTTGGGTCCTGCTGTCGCTTTTATTCTTGAACTTGAACAGGCGGCCGCCCTTCAACCTCTaGCTATTGTTACTTTCTGGG +
Preference number: 2 (lower is better)
Translates to: GSCIWVLLSLLFLNLNRRPPFNL*LLLLSG
Trigger: CCCAGAAAGTAACAATAGCCAGAGGTTGAAGGGCGG...CCGCCTGTTCAAGTTCAAGAATAAAAGCGACAGCAGGACCCAAATGCAGCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
3UTR-3UTR CCA 90 bp AGCTGCATTTGGGTCCTGCTGTCGCTTTTATTCTTGAACTTGAACAGGCGGCAGCCGCCCTTCAACCTCTaGCTATTGTTACTTTCTGGG +
Preference number: 2 (lower is better)
Translates to: SCIWVLLSLLFLNLNRRQPPFNL*LLLLSG
Trigger: CCCAGAAAGTAACAATAGCCAGAGGTTGAAGGGCGG...CTGCCGCCTGTTCAAGTTCAAGAATAAAAGCGACAGCAGGACCCAAATGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
3UTR-3UTR CCA 90 bp GTGTGCTGTGTGGACACAAGCATGTCTAGCCTGGGGAGTGGGTTGGGAGCTGCATTCTGGGAATTGTGTTaGGTTCTTGTAAGTTTACTT +
Preference number: 2 (lower is better)
Translates to: VCCVDTSMSSLGSGLGAAFWELC*VLVSLL
Trigger: AAGTAAACTTACAAGAACCCAACACAATTCCCAGAA...TGCAGCTCCCAACCCACTCCCCAGGCTAGACATGCTTGTGTCCACACAGCACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
3UTR-3UTR TCA 90 bp GAGCTGCATTTGGGTCCTGCTGTCGCTTTTATTCTTGAACTTGAACAGGCGGCAAAGAACCAGGTGGTATaGAGGATTACGCTGCAACAT +
Preference number: 2 (lower is better)
Translates to: ELHLGPAVAFILELEQAAKNQVV*RITLQH
Trigger: ATGTTGCAGCGTAATCCTTCATACCACCTGGTTCTT...TGCCGCCTGTTCAAGTTCAAGAATAAAAGCGACAGCAGGACCCAAATGCAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
3UTR-3UTR GCA 90 bp ACTGTAGTTCTAGGACATATGTATGGTCAGGACAACAGAGCAGAAGTTGATAATGAGTGGGTTGGGAGCTaGATTTGGGTCCTGCTGTCG +
Preference number: 2 (lower is better)
Translates to: TVVLGHMYGQDNRAEVDNEWVGS*IWVLLS
Trigger: CGACAGCAGGACCCAAATGCAGCTCCCAACCCACTC...ATTATCAACTTCTGCTCTGTTGTCCTGACCATACATATGTCCTAGAACTACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533050.6
ENST00000627851.2
3UTR-3UTR CCA 90 bp GAGCTGCATTTGGGTCCTGCTGTCGCTTTTATTCTTGAACTTGAACAGGCGGCAATATCAAGAACCAGGTaGTATGAAGGATTACGCTGC +
Preference number: 2 (lower is better)
Translates to: ELHLGPAVAFILELEQAAISRTR*YEGLRC
Trigger: GCAGCGTAATCCTTCATACCACCTGGTTCTTGATAT...TGCCGCCTGTTCAAGTTCAAGAATAAAAGCGACAGCAGGACCCAAATGCAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
3UTR-3UTR GCA 90 bp ACTGTAGTTCTAGGACATATGTATGGTCAGGACAACAGAGCAGAAGTTGATAATTCCTTCATGCAGAGCTaGAGCCGGTCAGTGGAAGTA +
Preference number: 2 (lower is better)
Translates to: TVVLGHMYGQDNRAEVDNSFMQS*SRSVEV
Trigger: TACTTCCACTGACCGGCTGCAGCTCTGCATGAAGGA...ATTATCAACTTCTGCTCTGTTGTCCTGACCATACATATGTCCTAGAACTACAGT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533050.6
ENST00000627851.2
3UTR-3UTR GCA 90 bp ACTGTAGTTCTAGGACATATGTATGGTCAGGACAACAGAGCAGAAGTTGATAATTATAGAGTACAAAACTaGAACAAGAGCCACAGTGAT +
Preference number: 2 (lower is better)
Translates to: TVVLGHMYGQDNRAEVDNYRVQN*NKSHSD
Trigger: ATCACTGTGGCTCTTGTTGCAGTTTTGTACTCTATA...ATTATCAACTTCTGCTCTGTTGTCCTGACCATACATATGTCCTAGAACTACAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533050.6
ENST00000627851.2
3UTR CCA 72 bp CATTGGTGTGCTGTGTGGACACAAGCATGTCTAGCCTaGGGAGTGGGTTGGGAGCTGCATTTGGGTCCTGCT +
Preference number: 3 (lower is better)
Translates to: HWCAVWTQACLA*GVGWELHLGPA
Trigger: AGCAGGACCCAAATGCAGCTCCCAACCCACTCCCCAGGCTAGACATGCTTGTGTCCACACAGCACACCAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
3UTR GCA 72 bp GAGCTGCAGCCGGTCAGTGGAAGTATCACATTGGTGTaGTGTGTGGACACAAGCATGTCTAGCCTGGGGAGT +
Preference number: 3 (lower is better)
Translates to: ELQPVSGSITLV*CVDTSMSSLGS
Trigger: ACTCCCCAGGCTAGACATGCTTGTGTCCACACAGCACACCAATGTGATACTTCCACTGACCGGCTGCAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
3UTR CCA 72 bp AGCCGGTCAGTGGAAGTATCACATTGGTGTGCTGTGTaGACACAAGCATGTCTAGCCTGGGGAGTGGGTTGG +
Preference number: 3 (lower is better)
Translates to: SRSVEVSHWCAV*TQACLAWGVGW
Trigger: CCAACCCACTCCCCAGGCTAGACATGCTTGTGTCCACACAGCACACCAATGTGATACTTCCACTGACCGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
3UTR CCA 72 bp ACCCCGAGTCCTTCATGCAGAGCTGCAGCCGGTCAGTaGAAGTATCACATTGGTGTGCTGTGTGGACACAAG +
Preference number: 3 (lower is better)
Translates to: TPSPSCRAAAGQ*KYHIGVLCGHK
Trigger: CTTGTGTCCACACAGCACACCAATGTGATACTTCCACTGACCGGCTGCAGCTCTGCATGAAGGACTCGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
3UTR-3UTR CAA 90 bp GTGTGCTGTGTGGACACAAGCATGTCTAGCCTGGGGAGTGGGTTGGGAGCTGCAGTTACTTTCTGGGAATaGTGTTGGGTTCTTGTAAGT +
Preference number: 3 (lower is better)
Translates to: VCCVDTSMSSLGSGLGAAVTFWE*CWVLVS
Trigger: ACTTACAAGAACCCAACACAATTCCCAGAAAGTAAC...TGCAGCTCCCAACCCACTCCCCAGGCTAGACATGCTTGTGTCCACACAGCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
3UTR-3UTR CAA 90 bp GTGTGCTGTGTGGACACAAGCATGTCTAGCCTGGGGAGTGGGTTGGGAGCTGCATTCAACCTCTGGCTATaGTTACTTTCTGGGAATTGT +
Preference number: 3 (lower is better)
Translates to: VCCVDTSMSSLGSGLGAAFNLWL*LLSGNC
Trigger: ACAATTCCCAGAAAGTAACAATAGCCAGAGGTTGAA...TGCAGCTCCCAACCCACTCCCCAGGCTAGACATGCTTGTGTCCACACAGCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
3UTR-3UTR CAA 90 bp GTGTGCTGTGTGGACACAAGCATGTCTAGCCTGGGGAGTGGGTTGGGAGCTGCACTTTTATTCTTGAACTaGAACAGGCGGCAGAATATC +
Preference number: 3 (lower is better)
Translates to: VCCVDTSMSSLGSGLGAALLFLN*NRRQNI
Trigger: GATATTCTGCCGCCTGTTCAAGTTCAAGAATAAAAG...TGCAGCTCCCAACCCACTCCCCAGGCTAGACATGCTTGTGTCCACACAGCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
3UTR-3UTR CAA 90 bp GCATCCAGACCCCGAGTCCTTCATGCAGAGCTGCAGCCGGTCAGTGGAAGTATCTTTCTGGGAATTGTGTaGGGTTCTTGTAAGTTTACT +
Preference number: 3 (lower is better)
Translates to: ASRPRVLHAELQPVSGSIFLGIV*GSCKFT
Trigger: AGTAAACTTACAAGAACCCAACACAATTCCCAGAAA...GATACTTCCACTGACCGGCTGCAGCTCTGCATGAAGGACTCGGGGTCTGGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
3UTR-3UTR CAA 90 bp GGGAGCTGCATTTGGGTCCTGCTGTCGCTTTTATTCTTGAACTTGAACAGGCGGGTTACTTTCTGGGAATaGTGTTGGGTTCTTGTAAGT +
Preference number: 3 (lower is better)
Translates to: GSCIWVLLSLLFLNLNRRVTFWE*CWVLVS
Trigger: ACTTACAAGAACCCAACACAATTCCCAGAAAGTAAC...CCGCCTGTTCAAGTTCAAGAATAAAAGCGACAGCAGGACCCAAATGCAGCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
3UTR-3UTR CAA 90 bp GAGCTGCATTTGGGTCCTGCTGTCGCTTTTATTCTTGAACTTGAACAGGCGGCATTCAACCTCTGGCTATaGTTACTTTCTGGGAATTGT +
Preference number: 3 (lower is better)
Translates to: ELHLGPAVAFILELEQAAFNLWL*LLSGNC
Trigger: ACAATTCCCAGAAAGTAACAATAGCCAGAGGTTGAA...TGCCGCCTGTTCAAGTTCAAGAATAAAAGCGACAGCAGGACCCAAATGCAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR TCA 90 bp ACTGTCTGTAGTAGGGCCTTACAGCTTGGTCTAAACGGTGGTGATTTCTCTAGCCGCACCGTCCCCACGTaGCTCGCCCAGGCCCCACCC +
Preference number: 4 (lower is better)
Translates to: TVCSRALQLGLNGGDFSSRTVPT*LAQAPP
Trigger: GGGTGGGGCCTGGGCGAGTCACGTGGGGACGGTGCG...GCTAGAGAAATCACCACCGTTTAGACCAAGCTGTAAGGCCCTACTACAGACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000627851.2
CDS-3UTR GCA 90 bp GCATCCAGACCCCGAGTCCTTCATGCAGAGCTGCAGCCGGTCAGTGGAAGTATCACCCCGAGTCCTTCATaGAGAGCTGCAGCCGGTCAG +
Preference number: 4 (lower is better)
Translates to: ASRPRVLHAELQPVSGSITPSPS*RAAAGQ
Trigger: CTGACCGGCTGCAGCTCTGCATGAAGGACTCGGGGT...GATACTTCCACTGACCGGCTGCAGCTCTGCATGAAGGACTCGGGGTCTGGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp GCATCCAGACCCCGAGTCCTTCATGCAGAGCTGCAGCCGGTCAGTGGAAGTATCGCCTGGGGAGTGGGTTaGGAGCTGCATTTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: ASRPRVLHAELQPVSGSIAWGVG*ELHLGP
Trigger: AGGACCCAAATGCAGCTCCCAACCCACTCCCCAGGC...GATACTTCCACTGACCGGCTGCAGCTCTGCATGAAGGACTCGGGGTCTGGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp GTGTGCTGTGTGGACACAAGCATGTCTAGCCTGGGGAGTGGGTTGGGAGCTGCACAAGCATGTCTAGCCTaGGGAGTGGGTTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: VCCVDTSMSSLGSGLGAAQACLA*GVGWEL
Trigger: CAGCTCCCAACCCACTCCCCAGGCTAGACATGCTTG...TGCAGCTCCCAACCCACTCCCCAGGCTAGACATGCTTGTGTCCACACAGCACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp GCATCCAGACCCCGAGTCCTTCATGCAGAGCTGCAGCCGGTCAGTGGAAGTATCGCCACAGTGATTCCATaGCATCCAGACCCCGAGTCC +
Preference number: 4 (lower is better)
Translates to: ASRPRVLHAELQPVSGSIATVIP*HPDPES
Trigger: GGACTCGGGGTCTGGATGCCATGGAATCACTGTGGC...GATACTTCCACTGACCGGCTGCAGCTCTGCATGAAGGACTCGGGGTCTGGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR GCA 90 bp AACACTGTCTGTAGTAGGGCCTTACAGCTTGGTCTAAACGGTGGTGATTTCTCTCGCCACTGCTCCAGCTaGAGCTACCGGCCGGCGCAG +
Preference number: 4 (lower is better)
Translates to: NTVCSRALQLGLNGGDFSRHCSS*SYRPAQ
Trigger: CTGCGCCGGCCGGTAGCTGCAGCTGGAGCAGTGGCG...AGAGAAATCACCACCGTTTAGACCAAGCTGTAAGGCCCTACTACAGACAGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000627851.2
CDS-3UTR GCA 90 bp GTGTGCTGTGTGGACACAAGCATGTCTAGCCTGGGGAGTGGGTTGGGAGCTGCATCCTTCATGCAGAGCTaGAGCCGGTCAGTGGAAGTA +
Preference number: 4 (lower is better)
Translates to: VCCVDTSMSSLGSGLGAASFMQS*SRSVEV
Trigger: TACTTCCACTGACCGGCTGCAGCTCTGCATGAAGGA...TGCAGCTCCCAACCCACTCCCCAGGCTAGACATGCTTGTGTCCACACAGCACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp GCATCCAGACCCCGAGTCCTTCATGCAGAGCTGCAGCCGGTCAGTGGAAGTATCGCTGCAGCCGGTCAGTaGAAGTATCACATTGGTGTG +
Preference number: 4 (lower is better)
Translates to: ASRPRVLHAELQPVSGSIAAAGQ*KYHIGV
Trigger: CACACCAATGTGATACTTCCACTGACCGGCTGCAGC...GATACTTCCACTGACCGGCTGCAGCTCTGCATGAAGGACTCGGGGTCTGGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR TCA 90 bp GCATCCAGACCCCGAGTCCTTCATGCAGAGCTGCAGCCGGTCAGTGGAAGTATCCTCCTGTGCAGCTTCTaGGAAGGTATATCCGAGTCT +
Preference number: 4 (lower is better)
Translates to: ASRPRVLHAELQPVSGSILLCSF*EGISES
Trigger: AGACTCGGATATACCTTCTCAGAAGCTGCACAGGAG...GATACTTCCACTGACCGGCTGCAGCTCTGCATGAAGGACTCGGGGTCTGGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533050.6
ENST00000627851.2
CDS-3UTR GCA 90 bp ATCCAGACCCCGAGTCCTTCATGCAGAGCTGCAGCCGGTCAGTGGAAGTATCACTCCTTCATGCAGAGCTaGAGCCGGTCAGTGGAAGTA +
Preference number: 4 (lower is better)
Translates to: IQTPSPSCRAAAGQWKYHSFMQS*SRSVEV
Trigger: TACTTCCACTGACCGGCTGCAGCTCTGCATGAAGGA...GTGATACTTCCACTGACCGGCTGCAGCTCTGCATGAAGGACTCGGGGTCTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp TTCATGCAGAGCTGCAGCCGGTCAGTGGAAGTATCACATTGGTGTGCTGTGTGGCAAGCATGTCTAGCCTaGGGAGTGGGTTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: FMQSCSRSVEVSHWCAVWQACLA*GVGWEL
Trigger: CAGCTCCCAACCCACTCCCCAGGCTAGACATGCTTG...CCACACAGCACACCAATGTGATACTTCCACTGACCGGCTGCAGCTCTGCATGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR TCA 90 bp ATCCAGACCCCGAGTCCTTCATGCAGAGCTGCAGCCGGTCAGTGGAAGTATCACGCATCCAGTAAGGCCTaGATTAACCCCTTCCAGGAT +
Preference number: 4 (lower is better)
Translates to: IQTPSPSCRAAAGQWKYHASSKA*INPFQD
Trigger: ATCCTGGAAGGGGTTAATTCAGGCCTTACTGGATGC...GTGATACTTCCACTGACCGGCTGCAGCTCTGCATGAAGGACTCGGGGTCTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR GCA 90 bp GTCTGTAGTAGGGCCTTACAGCTTGGTCTAAACGGTGGTGATTTCTCTAGCTCGTCCTCCAAACGCCACTaGTCCAGCTGCAGCTACCGG +
Preference number: 4 (lower is better)
Translates to: VCSRALQLGLNGGDFSSSSSKRH*SSCSYR
Trigger: CCGGTAGCTGCAGCTGGAGCAGTGGCGTTTGGAGGA...CGAGCTAGAGAAATCACCACCGTTTAGACCAAGCTGTAAGGCCCTACTACAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp ATCCAGACCCCGAGTCCTTCATGCAGAGCTGCAGCCGGTCAGTGGAAGTATCACTCTATATCAGAGGCCTaGCTCCCTGTAGAAGCCATC +
Preference number: 4 (lower is better)
Translates to: IQTPSPSCRAAAGQWKYHSISEA*LPVEAI
Trigger: GATGGCTTCTACAGGGAGCCAGGCCTCTGATATAGA...GTGATACTTCCACTGACCGGCTGCAGCTCTGCATGAAGGACTCGGGGTCTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp ATGCAGAGCTGCAGCCGGTCAGTGGAAGTATCACATTGGTGTGCTGTGTGGACATTGAGGGCTGGAACTTaGGGCGCAACTGCAGCACTA +
Preference number: 4 (lower is better)
Translates to: MQSCSRSVEVSHWCAVWTLRAGT*GATAAL
Trigger: TAGTGCTGCAGTTGCGCCCCAAGTTCCAGCCCTCAA...TGTCCACACAGCACACCAATGTGATACTTCCACTGACCGGCTGCAGCTCTGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp GGGAGCTGCATTTGGGTCCTGCTGTCGCTTTTATTCTTGAACTTGAACAGGCGGCCAGGATTTGAGGGCTaGAACTTGGGGCGCAACTGC +
Preference number: 4 (lower is better)
Translates to: GSCIWVLLSLLFLNLNRRPGFEG*NLGRNC
Trigger: GCAGTTGCGCCCCAAGTTCCAGCCCTCAAATCCTGG...CCGCCTGTTCAAGTTCAAGAATAAAAGCGACAGCAGGACCCAAATGCAGCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp GCATCCAGACCCCGAGTCCTTCATGCAGAGCTGCAGCCGGTCAGTGGAAGTATCAGGTCATGGGCAACATaGACCAGGTTCTTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: ASRPRVLHAELQPVSGSIRSWAT*TRFLSS
Trigger: TGAAGACAAGAACCTGGTCCATGTTGCCCATGACCT...GATACTTCCACTGACCGGCTGCAGCTCTGCATGAAGGACTCGGGGTCTGGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp GTGTGCTGTGTGGACACAAGCATGTCTAGCCTGGGGAGTGGGTTGGGAGCTGCACTGATGTACCCCTTGTaGAGATCTCACATGTCAGTC +
Preference number: 4 (lower is better)
Translates to: VCCVDTSMSSLGSGLGAALMYPL*RSHMSV
Trigger: GACTGACATGTGAGATCTCCACAAGGGGTACATCAG...TGCAGCTCCCAACCCACTCCCCAGGCTAGACATGCTTGTGTCCACACAGCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp GCATCCAGACCCCGAGTCCTTCATGCAGAGCTGCAGCCGGTCAGTGGAAGTATCCTGATGTACCCCTTGTaGAGATCTCACATGTCAGTC +
Preference number: 4 (lower is better)
Translates to: ASRPRVLHAELQPVSGSILMYPL*RSHMSV
Trigger: GACTGACATGTGAGATCTCCACAAGGGGTACATCAG...GATACTTCCACTGACCGGCTGCAGCTCTGCATGAAGGACTCGGGGTCTGGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp ATCCAGACCCCGAGTCCTTCATGCAGAGCTGCAGCCGGTCAGTGGAAGTATCACGTTGGGAGCTGCATTTaGGTCCTGCTGTCGCTTTTA +
Preference number: 4 (lower is better)
Translates to: IQTPSPSCRAAAGQWKYHVGSCI*VLLSLL
Trigger: TAAAAGCGACAGCAGGACCCAAATGCAGCTCCCAAC...GTGATACTTCCACTGACCGGCTGCAGCTCTGCATGAAGGACTCGGGGTCTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp GTCTGTAGTAGGGCCTTACAGCTTGGTCTAAACGGTGGTGATTTCTCTAGCTCGGCCTGGGGAGTGGGTTaGGAGCTGCATTTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: VCSRALQLGLNGGDFSSSAWGVG*ELHLGP
Trigger: AGGACCCAAATGCAGCTCCCAACCCACTCCCCAGGC...CGAGCTAGAGAAATCACCACCGTTTAGACCAAGCTGTAAGGCCCTACTACAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp GGGAGCTGCATTTGGGTCCTGCTGTCGCTTTTATTCTTGAACTTGAACAGGCGGCAAGCATGTCTAGCCTaGGGAGTGGGTTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: GSCIWVLLSLLFLNLNRRQACLA*GVGWEL
Trigger: CAGCTCCCAACCCACTCCCCAGGCTAGACATGCTTG...CCGCCTGTTCAAGTTCAAGAATAAAAGCGACAGCAGGACCCAAATGCAGCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR TCA 90 bp GCATCCAGACCCCGAGTCCTTCATGCAGAGCTGCAGCCGGTCAGTGGAAGTATCAGGTGGAGAACTGACTaGAGTAGCTGTTTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: ASRPRVLHAELQPVSGSIRWRTD*SSCFPE
Trigger: TTCTGGAAAACAGCTACTTCAGTCAGTTCTCCACCT...GATACTTCCACTGACCGGCTGCAGCTCTGCATGAAGGACTCGGGGTCTGGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360194.8
ENST00000533050.6
CDS-3UTR TCA 90 bp ATCCAGACCCCGAGTCCTTCATGCAGAGCTGCAGCCGGTCAGTGGAAGTATCACGGTCAGATTTATGCTTaGCAGCCTCCAAGAAAAGGG +
Preference number: 4 (lower is better)
Translates to: IQTPSPSCRAAAGQWKYHGQIYA*QPPRKG
Trigger: CCCTTTTCTTGGAGGCTGTCAAGCATAAATCTGACC...GTGATACTTCCACTGACCGGCTGCAGCTCTGCATGAAGGACTCGGGGTCTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR GCA 90 bp CTTCAACCTCTGGCTATTGTTACTTTCTGGGAATTGTGTTGGGTTCTTGTAAGTCGCCACTGCTCCAGCTaGAGCTACCGGCCGGCGCAG +
Preference number: 4 (lower is better)
Translates to: LQPLAIVTFWELCWVLVSRHCSS*SYRPAQ
Trigger: CTGCGCCGGCCGGTAGCTGCAGCTGGAGCAGTGGCG...ACTTACAAGAACCCAACACAATTCCCAGAAAGTAACAATAGCCAGAGGTTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000627851.2
CDS-3UTR GCA 90 bp TTCATGCAGAGCTGCAGCCGGTCAGTGGAAGTATCACATTGGTGTGCTGTGTGGAACTTGGGGCGCAACTaGAGCACTAATGCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: FMQSCSRSVEVSHWCAVWNLGRN*STNACS
Trigger: GGAACAGGCATTAGTGCTGCAGTTGCGCCCCAAGTT...CCACACAGCACACCAATGTGATACTTCCACTGACCGGCTGCAGCTCTGCATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR GCA 90 bp GTCTGTAGTAGGGCCTTACAGCTTGGTCTAAACGGTGGTGATTTCTCTAGCTCGGAGTGGGTTGGGAGCTaGATTTGGGTCCTGCTGTCG +
Preference number: 4 (lower is better)
Translates to: VCSRALQLGLNGGDFSSSEWVGS*IWVLLS
Trigger: CGACAGCAGGACCCAAATGCAGCTCCCAACCCACTC...CGAGCTAGAGAAATCACCACCGTTTAGACCAAGCTGTAAGGCCCTACTACAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR GCA 90 bp ACTGTCTGTAGTAGGGCCTTACAGCTTGGTCTAAACGGTGGTGATTTCTCTAGCACCCCGAGTCCTTCATaGAGAGCTGCAGCCGGTCAG +
Preference number: 4 (lower is better)
Translates to: TVCSRALQLGLNGGDFSSTPSPS*RAAAGQ
Trigger: CTGACCGGCTGCAGCTCTGCATGAAGGACTCGGGGT...GCTAGAGAAATCACCACCGTTTAGACCAAGCTGTAAGGCCCTACTACAGACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp GAGCTGCATTTGGGTCCTGCTGTCGCTTTTATTCTTGAACTTGAACAGGCGGCACCAGGATTTGAGGGCTaGAACTTGGGGCGCAACTGC +
Preference number: 4 (lower is better)
Translates to: ELHLGPAVAFILELEQAAPGFEG*NLGRNC
Trigger: GCAGTTGCGCCCCAAGTTCCAGCCCTCAAATCCTGG...TGCCGCCTGTTCAAGTTCAAGAATAAAAGCGACAGCAGGACCCAAATGCAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp TTCATGCAGAGCTGCAGCCGGTCAGTGGAAGTATCACATTGGTGTGCTGTGTGGGCTGCAGCCGGTCAGTaGAAGTATCACATTGGTGTG +
Preference number: 4 (lower is better)
Translates to: FMQSCSRSVEVSHWCAVWAAAGQ*KYHIGV
Trigger: CACACCAATGTGATACTTCCACTGACCGGCTGCAGC...CCACACAGCACACCAATGTGATACTTCCACTGACCGGCTGCAGCTCTGCATGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp AGCTGCATTTGGGTCCTGCTGTCGCTTTTATTCTTGAACTTGAACAGGCGGCAGGCCACAGTGATTCCATaGCATCCAGACCCCGAGTCC +
Preference number: 4 (lower is better)
Translates to: SCIWVLLSLLFLNLNRRQATVIP*HPDPES
Trigger: GGACTCGGGGTCTGGATGCCATGGAATCACTGTGGC...CTGCCGCCTGTTCAAGTTCAAGAATAAAAGCGACAGCAGGACCCAAATGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR TCA 90 bp TTCATGCAGAGCTGCAGCCGGTCAGTGGAAGTATCACATTGGTGTGCTGTGTGGTCAAGCTGTTTCCCCTaGTCTGCTGCATACAGTTCC +
Preference number: 4 (lower is better)
Translates to: FMQSCSRSVEVSHWCAVWSSCFP*SAAYSS
Trigger: GGAACTGTATGCAGCAGATCAGGGGAAACAGCTTGA...CCACACAGCACACCAATGTGATACTTCCACTGACCGGCTGCAGCTCTGCATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360194.8
ENST00000533050.6
CDS-3UTR TCA 90 bp ATGCAGAGCTGCAGCCGGTCAGTGGAAGTATCACATTGGTGTGCTGTGTGGACAGATGAGCCATTTAGCTaGCCTTCTCTCACCATCCCT +
Preference number: 4 (lower is better)
Translates to: MQSCSRSVEVSHWCAVWTDEPFS*PSLTIP
Trigger: AGGGATGGTGAGAGAAGGTCAGCTAAATGGCTCATC...TGTCCACACAGCACACCAATGTGATACTTCCACTGACCGGCTGCAGCTCTGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR GCA 90 bp ACTGTCTGTAGTAGGGCCTTACAGCTTGGTCTAAACGGTGGTGATTTCTCTAGCGAGTGGGTTGGGAGCTaGATTTGGGTCCTGCTGTCG +
Preference number: 4 (lower is better)
Translates to: TVCSRALQLGLNGGDFSSEWVGS*IWVLLS
Trigger: CGACAGCAGGACCCAAATGCAGCTCCCAACCCACTC...GCTAGAGAAATCACCACCGTTTAGACCAAGCTGTAAGGCCCTACTACAGACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR GCA 90 bp AACACTGTCTGTAGTAGGGCCTTACAGCTTGGTCTAAACGGTGGTGATTTCTCTACCCCGAGTCCTTCATaGAGAGCTGCAGCCGGTCAG +
Preference number: 4 (lower is better)
Translates to: NTVCSRALQLGLNGGDFSTPSPS*RAAAGQ
Trigger: CTGACCGGCTGCAGCTCTGCATGAAGGACTCGGGGT...AGAGAAATCACCACCGTTTAGACCAAGCTGTAAGGCCCTACTACAGACAGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp ATGCAGAGCTGCAGCCGGTCAGTGGAAGTATCACATTGGTGTGCTGTGTGGACATCTATATCAGAGGCCTaGCTCCCTGTAGAAGCCATC +
Preference number: 4 (lower is better)
Translates to: MQSCSRSVEVSHWCAVWTSISEA*LPVEAI
Trigger: GATGGCTTCTACAGGGAGCCAGGCCTCTGATATAGA...TGTCCACACAGCACACCAATGTGATACTTCCACTGACCGGCTGCAGCTCTGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp GCATCCAGACCCCGAGTCCTTCATGCAGAGCTGCAGCCGGTCAGTGGAAGTATCTGGATCGAACATTACTaGTACGAGGAGAGAGTTTCT +
Preference number: 4 (lower is better)
Translates to: ASRPRVLHAELQPVSGSIWIEHY*YEERVS
Trigger: AGAAACTCTCTCCTCGTACCAGTAATGTTCGATCCA...GATACTTCCACTGACCGGCTGCAGCTCTGCATGAAGGACTCGGGGTCTGGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360194.8
ENST00000533050.6
CDS-3UTR CCA 90 bp TTCATGCAGAGCTGCAGCCGGTCAGTGGAAGTATCACATTGGTGTGCTGTGTGGCATTGGTGTGCTGTGTaGACACAAGCATGTCTAGCC +
Preference number: 4 (lower is better)
Translates to: FMQSCSRSVEVSHWCAVWHWCAV*TQACLA
Trigger: GGCTAGACATGCTTGTGTCCACACAGCACACCAATG...CCACACAGCACACCAATGTGATACTTCCACTGACCGGCTGCAGCTCTGCATGAA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp ATGCAGAGCTGCAGCCGGTCAGTGGAAGTATCACATTGGTGTGCTGTGTGGACACATTGGTGTGCTGTGTaGACACAAGCATGTCTAGCC +
Preference number: 4 (lower is better)
Translates to: MQSCSRSVEVSHWCAVWTHWCAV*TQACLA
Trigger: GGCTAGACATGCTTGTGTCCACACAGCACACCAATG...TGTCCACACAGCACACCAATGTGATACTTCCACTGACCGGCTGCAGCTCTGCAT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR GCA 90 bp ACTTTCTGGGAATTGTGTTGGGTTCTTGTAAGTTTACTTGTTAAACACTGTCTGCGCCACTGCTCCAGCTaGAGCTACCGGCCGGCGCAG +
Preference number: 4 (lower is better)
Translates to: TFWELCWVLVSLLVKHCLRHCSS*SYRPAQ
Trigger: CTGCGCCGGCCGGTAGCTGCAGCTGGAGCAGTGGCG...CAGACAGTGTTTAACAAGTAAACTTACAAGAACCCAACACAATTCCCAGAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000627851.2
CDS-3UTR GCA 90 bp AGCTGCATTTGGGTCCTGCTGTCGCTTTTATTCTTGAACTTGAACAGGCGGCAGAACTTGGGGCGCAACTaGAGCACTAATGCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: SCIWVLLSLLFLNLNRRQNLGRN*STNACS
Trigger: GGAACAGGCATTAGTGCTGCAGTTGCGCCCCAAGTT...CTGCCGCCTGTTCAAGTTCAAGAATAAAAGCGACAGCAGGACCCAAATGCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp GTGTGCTGTGTGGACACAAGCATGTCTAGCCTGGGGAGTGGGTTGGGAGCTGCAAAAGATCAAAATCAATaGCAGCATCCAGTAAGGCCT +
Preference number: 4 (lower is better)
Translates to: VCCVDTSMSSLGSGLGAAKDQNQ*QHPVRP
Trigger: AGGCCTTACTGGATGCTGCCATTGATTTTGATCTTT...TGCAGCTCCCAACCCACTCCCCAGGCTAGACATGCTTGTGTCCACACAGCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp GCATCCAGACCCCGAGTCCTTCATGCAGAGCTGCAGCCGGTCAGTGGAAGTATCAAAGATCAAAATCAATaGCAGCATCCAGTAAGGCCT +
Preference number: 4 (lower is better)
Translates to: ASRPRVLHAELQPVSGSIKDQNQ*QHPVRP
Trigger: AGGCCTTACTGGATGCTGCCATTGATTTTGATCTTT...GATACTTCCACTGACCGGCTGCAGCTCTGCATGAAGGACTCGGGGTCTGGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp ATCCAGACCCCGAGTCCTTCATGCAGAGCTGCAGCCGGTCAGTGGAAGTATCACTGGATCGAACATTACTaGTACGAGGAGAGAGTTTCT +
Preference number: 4 (lower is better)
Translates to: IQTPSPSCRAAAGQWKYHWIEHY*YEERVS
Trigger: AGAAACTCTCTCCTCGTACCAGTAATGTTCGATCCA...GTGATACTTCCACTGACCGGCTGCAGCTCTGCATGAAGGACTCGGGGTCTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360194.8
ENST00000533050.6
CDS-3UTR TCA 90 bp ATGCAGAGCTGCAGCCGGTCAGTGGAAGTATCACATTGGTGTGCTGTGTGGACAGAGGTTCGCCATCGTTaGAGAATCCAAAAATCTCGT +
Preference number: 4 (lower is better)
Translates to: MQSCSRSVEVSHWCAVWTEVRHR*RIQKSR
Trigger: ACGAGATTTTTGGATTCTTCAACGATGGCGAACCTC...TGTCCACACAGCACACCAATGTGATACTTCCACTGACCGGCTGCAGCTCTGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR GCA 90 bp GTGTGCTGTGTGGACACAAGCATGTCTAGCCTGGGGAGTGGGTTGGGAGCTGCATATAGAGTACAAAACTaGAACAAGAGCCACAGTGAT +
Preference number: 4 (lower is better)
Translates to: VCCVDTSMSSLGSGLGAAYRVQN*NKSHSD
Trigger: ATCACTGTGGCTCTTGTTGCAGTTTTGTACTCTATA...TGCAGCTCCCAACCCACTCCCCAGGCTAGACATGCTTGTGTCCACACAGCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp GAGCTGCATTTGGGTCCTGCTGTCGCTTTTATTCTTGAACTTGAACAGGCGGCATTGGAAGCAGCTTCCTaGGCTTTTTGGTGGGAGGTT +
Preference number: 4 (lower is better)
Translates to: ELHLGPAVAFILELEQAALEAAS*AFWWEV
Trigger: AACCTCCCACCAAAAAGCCCAGGAAGCTGCTTCCAA...TGCCGCCTGTTCAAGTTCAAGAATAAAAGCGACAGCAGGACCCAAATGCAGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp AGCTGCATTTGGGTCCTGCTGTCGCTTTTATTCTTGAACTTGAACAGGCGGCAGTTGGAAGCAGCTTCCTaGGCTTTTTGGTGGGAGGTT +
Preference number: 4 (lower is better)
Translates to: SCIWVLLSLLFLNLNRRQLEAAS*AFWWEV
Trigger: AACCTCCCACCAAAAAGCCCAGGAAGCTGCTTCCAA...CTGCCGCCTGTTCAAGTTCAAGAATAAAAGCGACAGCAGGACCCAAATGCAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp GGGAGCTGCATTTGGGTCCTGCTGTCGCTTTTATTCTTGAACTTGAACAGGCGGAGGTCATGGGCAACATaGACCAGGTTCTTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: GSCIWVLLSLLFLNLNRRRSWAT*TRFLSS
Trigger: TGAAGACAAGAACCTGGTCCATGTTGCCCATGACCT...CCGCCTGTTCAAGTTCAAGAATAAAAGCGACAGCAGGACCCAAATGCAGCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp GAGCTGCATTTGGGTCCTGCTGTCGCTTTTATTCTTGAACTTGAACAGGCGGCAGTTGGGAGCTGCATTTaGGTCCTGCTGTCGCTTTTA +
Preference number: 4 (lower is better)
Translates to: ELHLGPAVAFILELEQAAVGSCI*VLLSLL
Trigger: TAAAAGCGACAGCAGGACCCAAATGCAGCTCCCAAC...TGCCGCCTGTTCAAGTTCAAGAATAAAAGCGACAGCAGGACCCAAATGCAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp ATGCAGAGCTGCAGCCGGTCAGTGGAAGTATCACATTGGTGTGCTGTGTGGACAGTGGAAGTATCACATTaGTGTGCTGTGTGGACACAA +
Preference number: 4 (lower is better)
Translates to: MQSCSRSVEVSHWCAVWTVEVSH*CAVWTQ
Trigger: TTGTGTCCACACAGCACACCAATGTGATACTTCCAC...TGTCCACACAGCACACCAATGTGATACTTCCACTGACCGGCTGCAGCTCTGCAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp CCTGCTGTCGCTTTTATTCTTGAACTTGAACAGGCGGCAGAATATCAAGAACCAGCCACAGTGATTCCATaGCATCCAGACCCCGAGTCC +
Preference number: 4 (lower is better)
Translates to: PAVAFILELEQAAEYQEPATVIP*HPDPES
Trigger: GGACTCGGGGTCTGGATGCCATGGAATCACTGTGGC...TGGTTCTTGATATTCTGCCGCCTGTTCAAGTTCAAGAATAAAAGCGACAGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR TCA 90 bp AGCTGCATTTGGGTCCTGCTGTCGCTTTTATTCTTGAACTTGAACAGGCGGCAGGGTCAGATTTATGCTTaGCAGCCTCCAAGAAAAGGG +
Preference number: 4 (lower is better)
Translates to: SCIWVLLSLLFLNLNRRQGQIYA*QPPRKG
Trigger: CCCTTTTCTTGGAGGCTGTCAAGCATAAATCTGACC...CTGCCGCCTGTTCAAGTTCAAGAATAAAAGCGACAGCAGGACCCAAATGCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR TCA 90 bp TTCATGCAGAGCTGCAGCCGGTCAGTGGAAGTATCACATTGGTGTGCTGTGTGGTTTCTCGAAGCTTTTTaGACTCATCTACGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: FMQSCSRSVEVSHWCAVWFLEAF*THLRLL
Trigger: GAGGAGACGTAGATGAGTTCAAAAAGCTTCGAGAAA...CCACACAGCACACCAATGTGATACTTCCACTGACCGGCTGCAGCTCTGCATGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR GCA 90 bp CTTCAACCTCTGGCTATTGTTACTTTCTGGGAATTGTGTTGGGTTCTTGTAAGTTCCTCCAAACGCCACTaGTCCAGCTGCAGCTACCGG +
Preference number: 4 (lower is better)
Translates to: LQPLAIVTFWELCWVLVSSSKRH*SSCSYR
Trigger: CCGGTAGCTGCAGCTGGAGCAGTGGCGTTTGGAGGA...ACTTACAAGAACCCAACACAATTCCCAGAAAGTAACAATAGCCAGAGGTTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR GCA 90 bp TTCATGCAGAGCTGCAGCCGGTCAGTGGAAGTATCACATTGGTGTGCTGTGTGGTTTCCCCTGATCTGCTaGATACAGTTCCAAGAGATT +
Preference number: 4 (lower is better)
Translates to: FMQSCSRSVEVSHWCAVWFPLIC*IQFQEI
Trigger: AATCTCTTGGAACTGTATGCAGCAGATCAGGGGAAA...CCACACAGCACACCAATGTGATACTTCCACTGACCGGCTGCAGCTCTGCATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360194.8
ENST00000533050.6
CDS-3UTR GCA 90 bp GTCTGTAGTAGGGCCTTACAGCTTGGTCTAAACGGTGGTGATTTCTCTAGCTCGCTGTTTCCCCTGATCTaGTGCATACAGTTCCAAGAG +
Preference number: 4 (lower is better)
Translates to: VCSRALQLGLNGGDFSSSLFPLI*CIQFQE
Trigger: CTCTTGGAACTGTATGCAGCAGATCAGGGGAAACAG...CGAGCTAGAGAAATCACCACCGTTTAGACCAAGCTGTAAGGCCCTACTACAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360194.8
ENST00000533050.6
CDS-3UTR CCA 90 bp ACTGTCTGTAGTAGGGCCTTACAGCTTGGTCTAAACGGTGGTGATTTCTCTAGCTCTATATCAGAGGCCTaGCTCCCTGTAGAAGCCATC +
Preference number: 4 (lower is better)
Translates to: TVCSRALQLGLNGGDFSSSISEA*LPVEAI
Trigger: GATGGCTTCTACAGGGAGCCAGGCCTCTGATATAGA...GCTAGAGAAATCACCACCGTTTAGACCAAGCTGTAAGGCCCTACTACAGACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp ACTGTCTGTAGTAGGGCCTTACAGCTTGGTCTAAACGGTGGTGATTTCTCTAGCTTGGAAGCAGCTTCCTaGGCTTTTTGGTGGGAGGTT +
Preference number: 4 (lower is better)
Translates to: TVCSRALQLGLNGGDFSSLEAAS*AFWWEV
Trigger: AACCTCCCACCAAAAAGCCCAGGAAGCTGCTTCCAA...GCTAGAGAAATCACCACCGTTTAGACCAAGCTGTAAGGCCCTACTACAGACAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp TTGTTAAACACTGTCTGTAGTAGGGCCTTACAGCTTGGTCTAAACGGTGGTGATTTGAGGGCTGGAACTTaGGGCGCAACTGCAGCACTA +
Preference number: 4 (lower is better)
Translates to: LLNTVCSRALQLGLNGGDLRAGT*GATAAL
Trigger: TAGTGCTGCAGTTGCGCCCCAAGTTCCAGCCCTCAA...ATCACCACCGTTTAGACCAAGCTGTAAGGCCCTACTACAGACAGTGTTTAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp CCTTCAACCTCTGGCTATTGTTACTTTCTGGGAATTGTGTTGGGTTCTTGTAAGCCAGGATTTGAGGGCTaGAACTTGGGGCGCAACTGC +
Preference number: 4 (lower is better)
Translates to: PSTSGYCYFLGIVLGSCKPGFEG*NLGRNC
Trigger: GCAGTTGCGCCCCAAGTTCCAGCCCTCAAATCCTGG...CTTACAAGAACCCAACACAATTCCCAGAAAGTAACAATAGCCAGAGGTTGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp GTCTGTAGTAGGGCCTTACAGCTTGGTCTAAACGGTGGTGATTTCTCTAGCTCGCGAGGAGAGAGTTTCTaGATAAGGTCATGGGCAACA +
Preference number: 4 (lower is better)
Translates to: VCSRALQLGLNGGDFSSSRGESF*IRSWAT
Trigger: TGTTGCCCATGACCTTATCCAGAAACTCTCTCCTCG...CGAGCTAGAGAAATCACCACCGTTTAGACCAAGCTGTAAGGCCCTACTACAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360194.8
ENST00000533050.6
CDS-3UTR CCA 90 bp AACACTGTCTGTAGTAGGGCCTTACAGCTTGGTCTAAACGGTGGTGATTTCTCTAAAGGGCCTGGAAAGTaGTGTCATCCACAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: NTVCSRALQLGLNGGDFSKGPGK*CHPQSS
Trigger: GCTGGACTGTGGATGACACCACTTTCCAGGCCCTTT...AGAGAAATCACCACCGTTTAGACCAAGCTGTAAGGCCCTACTACAGACAGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp GCATCCAGACCCCGAGTCCTTCATGCAGAGCTGCAGCCGGTCAGTGGAAGTATCTTCTGGGAATTGTGTTaGGTTCTTGTAAGTTTACTT +
Preference number: 4 (lower is better)
Translates to: ASRPRVLHAELQPVSGSIFWELC*VLVSLL
Trigger: AAGTAAACTTACAAGAACCCAACACAATTCCCAGAA...GATACTTCCACTGACCGGCTGCAGCTCTGCATGAAGGACTCGGGGTCTGGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp ACTGTCTGTAGTAGGGCCTTACAGCTTGGTCTAAACGGTGGTGATTTCTCTAGCCCGCCCTTCAACCTCTaGCTATTGTTACTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: TVCSRALQLGLNGGDFSSPPFNL*LLLLSG
Trigger: CCCAGAAAGTAACAATAGCCAGAGGTTGAAGGGCGG...GCTAGAGAAATCACCACCGTTTAGACCAAGCTGTAAGGCCCTACTACAGACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp ACTGTCTGTAGTAGGGCCTTACAGCTTGGTCTAAACGGTGGTGATTTCTCTAGCCATTGGTGTGCTGTGTaGACACAAGCATGTCTAGCC +
Preference number: 4 (lower is better)
Translates to: TVCSRALQLGLNGGDFSSHWCAV*TQACLA
Trigger: GGCTAGACATGCTTGTGTCCACACAGCACACCAATG...GCTAGAGAAATCACCACCGTTTAGACCAAGCTGTAAGGCCCTACTACAGACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp AACACTGTCTGTAGTAGGGCCTTACAGCTTGGTCTAAACGGTGGTGATTTCTCTGCTGCAGCCGGTCAGTaGAAGTATCACATTGGTGTG +
Preference number: 4 (lower is better)
Translates to: NTVCSRALQLGLNGGDFSAAAGQ*KYHIGV
Trigger: CACACCAATGTGATACTTCCACTGACCGGCTGCAGC...AGAGAAATCACCACCGTTTAGACCAAGCTGTAAGGCCCTACTACAGACAGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp AGCTGCATTTGGGTCCTGCTGTCGCTTTTATTCTTGAACTTGAACAGGCGGCAGGTAGAGCCAGGGTCCTaGCAAGTAAATGAACAAGCT +
Preference number: 4 (lower is better)
Translates to: SCIWVLLSLLFLNLNRRQVEPGS*QVNEQA
Trigger: AGCTTGTTCATTTACTTGCCAGGACCCTGGCTCTAC...CTGCCGCCTGTTCAAGTTCAAGAATAAAAGCGACAGCAGGACCCAAATGCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533050.6
ENST00000627851.2
3UTR CAA 72 bp GGGAGCTGCATTTGGGTCCTGCTGTCGCTTTTATTCTaGAACTTGAACAGGCGGCAGAATATCAAGAACCAG +
Preference number: 4 (lower is better)
Translates to: GSCIWVLLSLLF*NLNRRQNIKNQ
Trigger: CTGGTTCTTGATATTCTGCCGCCTGTTCAAGTTCAAGAATAAAAGCGACAGCAGGACCCAAATGCAGCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR TCA 90 bp ATGCAGAGCTGCAGCCGGTCAGTGGAAGTATCACATTGGTGTGCTGTGTGGACAGCCCAGGAAAAGAAATaGCTTGTTTTCGTAGAGTTT +
Preference number: 4 (lower is better)
Translates to: MQSCSRSVEVSHWCAVWTAQEKK*LVFVEF
Trigger: AAACTCTACGAAAACAAGTCATTTCTTTTCCTGGGC...TGTCCACACAGCACACCAATGTGATACTTCCACTGACCGGCTGCAGCTCTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR TCA 90 bp AGCTGCATTTGGGTCCTGCTGTCGCTTTTATTCTTGAACTTGAACAGGCGGCAGCTCTCCGAACCAGCATaGAATGTTCTAGGTCAGATT +
Preference number: 4 (lower is better)
Translates to: SCIWVLLSLLFLNLNRRQLSEPA*NVLGQI
Trigger: AATCTGACCTAGAACATTTCATGCTGGTTCGGAGAG...CTGCCGCCTGTTCAAGTTCAAGAATAAAAGCGACAGCAGGACCCAAATGCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR TCA 90 bp GTCTGTAGTAGGGCCTTACAGCTTGGTCTAAACGGTGGTGATTTCTCTAGCTCGCACATGTCAGTCGCTTaGAATATTCTGGAAGATCGG +
Preference number: 4 (lower is better)
Translates to: VCSRALQLGLNGGDFSSSHMSVA*NILEDR
Trigger: CCGATCTTCCAGAATATTTCAAGCGACTGACATGTG...CGAGCTAGAGAAATCACCACCGTTTAGACCAAGCTGTAAGGCCCTACTACAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR TCA 90 bp GAGCTGCATTTGGGTCCTGCTGTCGCTTTTATTCTTGAACTTGAACAGGCGGCACACATGTCAGTCGCTTaGAATATTCTGGAAGATCGG +
Preference number: 4 (lower is better)
Translates to: ELHLGPAVAFILELEQAAHMSVA*NILEDR
Trigger: CCGATCTTCCAGAATATTTCAAGCGACTGACATGTG...TGCCGCCTGTTCAAGTTCAAGAATAAAAGCGACAGCAGGACCCAAATGCAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR TCA 90 bp AACACTGTCTGTAGTAGGGCCTTACAGCTTGGTCTAAACGGTGGTGATTTCTCTGATGAGCCATTTAGCTaGCCTTCTCTCACCATCCCT +
Preference number: 4 (lower is better)
Translates to: NTVCSRALQLGLNGGDFSDEPFS*PSLTIP
Trigger: AGGGATGGTGAGAGAAGGTCAGCTAAATGGCTCATC...AGAGAAATCACCACCGTTTAGACCAAGCTGTAAGGCCCTACTACAGACAGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp CCTTCAACCTCTGGCTATTGTTACTTTCTGGGAATTGTGTTGGGTTCTTGTAAGGCTTCCTGGGCTTTTTaGTGGGAGGTTCGCCATCGT +
Preference number: 4 (lower is better)
Translates to: PSTSGYCYFLGIVLGSCKASWAF*WEVRHR
Trigger: ACGATGGCGAACCTCCCACCAAAAAGCCCAGGAAGC...CTTACAAGAACCCAACACAATTCCCAGAAAGTAACAATAGCCAGAGGTTGAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp ACTGTCTGTAGTAGGGCCTTACAGCTTGGTCTAAACGGTGGTGATTTCTCTAGCTTCTGGATAAGGTCATaGGCAACATGGACCAGGTTC +
Preference number: 4 (lower is better)
Translates to: TVCSRALQLGLNGGDFSSFWIRS*ATWTRF
Trigger: GAACCTGGTCCATGTTGCCCATGACCTTATCCAGAA...GCTAGAGAAATCACCACCGTTTAGACCAAGCTGTAAGGCCCTACTACAGACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp TTAGAGTTTCTTACAATGACTCTAAAAGTAGAGCCAGGGTCCTGGCAAGTAAATGCCTGGGGAGTGGGTTaGGAGCTGCATTTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: LEFLTMTLKVEPGSWQVNAWGVG*ELHLGP
Trigger: AGGACCCAAATGCAGCTCCCAACCCACTCCCCAGGC...ATTTACTTGCCAGGACCCTGGCTCTACTTTTAGAGTCATTGTAAGAAACTCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp GTCTGTAGTAGGGCCTTACAGCTTGGTCTAAACGGTGGTGATTTCTCTAGCTCGGTGGAAGTATCACATTaGTGTGCTGTGTGGACACAA +
Preference number: 4 (lower is better)
Translates to: VCSRALQLGLNGGDFSSSVEVSH*CAVWTQ
Trigger: TTGTGTCCACACAGCACACCAATGTGATACTTCCAC...CGAGCTAGAGAAATCACCACCGTTTAGACCAAGCTGTAAGGCCCTACTACAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp GAGCTGCATTTGGGTCCTGCTGTCGCTTTTATTCTTGAACTTGAACAGGCGGCAACAGGAGAGAGTTTCTaGATAAGGTCATGGGCAACA +
Preference number: 4 (lower is better)
Translates to: ELHLGPAVAFILELEQAATGESF*IRSWAT
Trigger: TGTTGCCCATGACCTTATCCAGAAACTCTCTCCTGT...TGCCGCCTGTTCAAGTTCAAGAATAAAAGCGACAGCAGGACCCAAATGCAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627851.2
CDS-3UTR TCA 90 bp ACTGTCTGTAGTAGGGCCTTACAGCTTGGTCTAAACGGTGGTGATTTCTCTAGCGAGGTTCGCCATCGTTaGAGAATCCAAAAATCTCGT +
Preference number: 4 (lower is better)
Translates to: TVCSRALQLGLNGGDFSSEVRHR*RIQKSR
Trigger: ACGAGATTTTTGGATTCTTCAACGATGGCGAACCTC...GCTAGAGAAATCACCACCGTTTAGACCAAGCTGTAAGGCCCTACTACAGACAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR TCA 90 bp GGGAGCTGCATTTGGGTCCTGCTGTCGCTTTTATTCTTGAACTTGAACAGGCGGTCATGGAGACATTTCTaGAACTTTTTGCTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: GSCIWVLLSLLFLNLNRRSWRHF*NFLLSS
Trigger: TGAGGAGAGCAAAAAGTTTCAGAAATGTCTCCATGA...CCGCCTGTTCAAGTTCAAGAATAAAAGCGACAGCAGGACCCAAATGCAGCTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR TCA 90 bp TTCATGCAGAGCTGCAGCCGGTCAGTGGAAGTATCACATTGGTGTGCTGTGTGGAGAATCTTCCATCTTTaGCTCCAAGTCATCAAATAC +
Preference number: 4 (lower is better)
Translates to: FMQSCSRSVEVSHWCAVWRIFHL*LQVIKY
Trigger: GTATTTGATGACTTGGAGTCAAAGATGGAAGATTCT...CCACACAGCACACCAATGTGATACTTCCACTGACCGGCTGCAGCTCTGCATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360194.8
ENST00000533050.6
CDS-3UTR GCA 90 bp TTAGAGTTTCTTACAATGACTCTAAAAGTAGAGCCAGGGTCCTGGCAAGTAAATGAGTGGGTTGGGAGCTaGATTTGGGTCCTGCTGTCG +
Preference number: 4 (lower is better)
Translates to: LEFLTMTLKVEPGSWQVNEWVGS*IWVLLS
Trigger: CGACAGCAGGACCCAAATGCAGCTCCCAACCCACTC...ATTTACTTGCCAGGACCCTGGCTCTACTTTTAGAGTCATTGTAAGAAACTCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533050.6
ENST00000627851.2
CDS-3UTR GCA 90 bp CCTTCAACCTCTGGCTATTGTTACTTTCTGGGAATTGTGTTGGGTTCTTGTAAGTCCTTCATGCAGAGCTaGAGCCGGTCAGTGGAAGTA +
Preference number: 4 (lower is better)
Translates to: PSTSGYCYFLGIVLGSCKSFMQS*SRSVEV
Trigger: TACTTCCACTGACCGGCTGCAGCTCTGCATGAAGGA...CTTACAAGAACCCAACACAATTCCCAGAAAGTAACAATAGCCAGAGGTTGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp AACACTGTCTGTAGTAGGGCCTTACAGCTTGGTCTAAACGGTGGTGATTTCTCTAGGTCATGGGCAACATaGACCAGGTTCTTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: NTVCSRALQLGLNGGDFSRSWAT*TRFLSS
Trigger: TGAAGACAAGAACCTGGTCCATGTTGCCCATGACCT...AGAGAAATCACCACCGTTTAGACCAAGCTGTAAGGCCCTACTACAGACAGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp CCTTCAACCTCTGGCTATTGTTACTTTCTGGGAATTGTGTTGGGTTCTTGTAAGAAAGGGCCTGGAAAGTaGTGTCATCCACAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: PSTSGYCYFLGIVLGSCKKGPGK*CHPQSS
Trigger: GCTGGACTGTGGATGACACCACTTTCCAGGCCCTTT...CTTACAAGAACCCAACACAATTCCCAGAAAGTAACAATAGCCAGAGGTTGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp AACACTGTCTGTAGTAGGGCCTTACAGCTTGGTCTAAACGGTGGTGATTTCTCTCTGATGTACCCCTTGTaGAGATCTCACATGTCAGTC +
Preference number: 4 (lower is better)
Translates to: NTVCSRALQLGLNGGDFSLMYPL*RSHMSV
Trigger: GACTGACATGTGAGATCTCCACAAGGGGTACATCAG...AGAGAAATCACCACCGTTTAGACCAAGCTGTAAGGCCCTACTACAGACAGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp CCTGCTGTCGCTTTTATTCTTGAACTTGAACAGGCGGCAGAATATCAAGAACCACCGCCCTTCAACCTCTaGCTATTGTTACTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: PAVAFILELEQAAEYQEPPPFNL*LLLLSG
Trigger: CCCAGAAAGTAACAATAGCCAGAGGTTGAAGGGCGG...TGGTTCTTGATATTCTGCCGCCTGTTCAAGTTCAAGAATAAAAGCGACAGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp GTCTGTAGTAGGGCCTTACAGCTTGGTCTAAACGGTGGTGATTTCTCTAGCTCGATATCAAGAACCAGGTaGTATGAAGGATTACGCTGC +
Preference number: 4 (lower is better)
Translates to: VCSRALQLGLNGGDFSSSISRTR*YEGLRC
Trigger: GCAGCGTAATCCTTCATACCACCTGGTTCTTGATAT...CGAGCTAGAGAAATCACCACCGTTTAGACCAAGCTGTAAGGCCCTACTACAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR TCA 90 bp AACACTGTCTGTAGTAGGGCCTTACAGCTTGGTCTAAACGGTGGTGATTTCTCTGAGGTTCGCCATCGTTaGAGAATCCAAAAATCTCGT +
Preference number: 4 (lower is better)
Translates to: NTVCSRALQLGLNGGDFSEVRHR*RIQKSR
Trigger: ACGAGATTTTTGGATTCTTCAACGATGGCGAACCTC...AGAGAAATCACCACCGTTTAGACCAAGCTGTAAGGCCCTACTACAGACAGTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR TCA 90 bp GAGCTGCATTTGGGTCCTGCTGTCGCTTTTATTCTTGAACTTGAACAGGCGGCAGCCCAGGAAAAGAAATaGCTTGTTTTCGTAGAGTTT +
Preference number: 4 (lower is better)
Translates to: ELHLGPAVAFILELEQAAAQEKK*LVFVEF
Trigger: AAACTCTACGAAAACAAGTCATTTCTTTTCCTGGGC...TGCCGCCTGTTCAAGTTCAAGAATAAAAGCGACAGCAGGACCCAAATGCAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR TCA 90 bp TTGTTAAACACTGTCTGTAGTAGGGCCTTACAGCTTGGTCTAAACGGTGGTGATGGTCAGATTTATGCTTaGCAGCCTCCAAGAAAAGGG +
Preference number: 4 (lower is better)
Translates to: LLNTVCSRALQLGLNGGDGQIYA*QPPRKG
Trigger: CCCTTTTCTTGGAGGCTGTCAAGCATAAATCTGACC...ATCACCACCGTTTAGACCAAGCTGTAAGGCCCTACTACAGACAGTGTTTAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR TCA 90 bp AACACTGTCTGTAGTAGGGCCTTACAGCTTGGTCTAAACGGTGGTGATTTCTCTAAGAACCAGGTGGTATaGAGGATTACGCTGCAACAT +
Preference number: 4 (lower is better)
Translates to: NTVCSRALQLGLNGGDFSKNQVV*RITLQH
Trigger: ATGTTGCAGCGTAATCCTTCATACCACCTGGTTCTT...AGAGAAATCACCACCGTTTAGACCAAGCTGTAAGGCCCTACTACAGACAGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR TCA 90 bp GGGAGCTGCATTTGGGTCCTGCTGTCGCTTTTATTCTTGAACTTGAACAGGCGGGTTTCGTGCAAAGAATaGCAACTTCTTTCTTTGTCA +
Preference number: 4 (lower is better)
Translates to: GSCIWVLLSLLFLNLNRRVSCKE*QLLSLS
Trigger: TGACAAAGAAAGAAGTTGTCATTCTTTGCACGAAAC...CCGCCTGTTCAAGTTCAAGAATAAAAGCGACAGCAGGACCCAAATGCAGCTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp CCTGCTGTCGCTTTTATTCTTGAACTTGAACAGGCGGCAGAATATCAAGAACCATTCTGGATAAGGTCATaGGCAACATGGACCAGGTTC +
Preference number: 4 (lower is better)
Translates to: PAVAFILELEQAAEYQEPFWIRS*ATWTRF
Trigger: GAACCTGGTCCATGTTGCCCATGACCTTATCCAGAA...TGGTTCTTGATATTCTGCCGCCTGTTCAAGTTCAAGAATAAAAGCGACAGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp CTTCAACCTCTGGCTATTGTTACTTTCTGGGAATTGTGTTGGGTTCTTGTAAGTAAAGGGCCTGGAAAGTaGTGTCATCCACAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: LQPLAIVTFWELCWVLVSKGPGK*CHPQSS
Trigger: GCTGGACTGTGGATGACACCACTTTCCAGGCCCTTT...ACTTACAAGAACCCAACACAATTCCCAGAAAGTAACAATAGCCAGAGGTTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp TTGTTAAACACTGTCTGTAGTAGGGCCTTACAGCTTGGTCTAAACGGTGGTGATCTGATGTACCCCTTGTaGAGATCTCACATGTCAGTC +
Preference number: 4 (lower is better)
Translates to: LLNTVCSRALQLGLNGGDLMYPL*RSHMSV
Trigger: GACTGACATGTGAGATCTCCACAAGGGGTACATCAG...ATCACCACCGTTTAGACCAAGCTGTAAGGCCCTACTACAGACAGTGTTTAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp TTGTTAAACACTGTCTGTAGTAGGGCCTTACAGCTTGGTCTAAACGGTGGTGATGTAGAGCCAGGGTCCTaGCAAGTAAATGAACAAGCT +
Preference number: 4 (lower is better)
Translates to: LLNTVCSRALQLGLNGGDVEPGS*QVNEQA
Trigger: AGCTTGTTCATTTACTTGCCAGGACCCTGGCTCTAC...ATCACCACCGTTTAGACCAAGCTGTAAGGCCCTACTACAGACAGTGTTTAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533050.6
ENST00000627851.2
3UTR CAA 72 bp TGCATTTGGGTCCTGCTGTCGCTTTTATTCTTGAACTaGAACAGGCGGCAGAATATCAAGAACCAGGTGGTA +
Preference number: 4 (lower is better)
Translates to: CIWVLLSLLFLN*NRRQNIKNQVV
Trigger: TACCACCTGGTTCTTGATATTCTGCCGCCTGTTCAAGTTCAAGAATAAAAGCGACAGCAGGACCCAAATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR TCA 90 bp CCTTCAACCTCTGGCTATTGTTACTTTCTGGGAATTGTGTTGGGTTCTTGTAAGGGTCAGATTTATGCTTaGCAGCCTCCAAGAAAAGGG +
Preference number: 4 (lower is better)
Translates to: PSTSGYCYFLGIVLGSCKGQIYA*QPPRKG
Trigger: CCCTTTTCTTGGAGGCTGTCAAGCATAAATCTGACC...CTTACAAGAACCCAACACAATTCCCAGAAAGTAACAATAGCCAGAGGTTGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR TCA 90 bp TTGTTAAACACTGTCTGTAGTAGGGCCTTACAGCTTGGTCTAAACGGTGGTGATCTCTCCGAACCAGCATaGAATGTTCTAGGTCAGATT +
Preference number: 4 (lower is better)
Translates to: LLNTVCSRALQLGLNGGDLSEPA*NVLGQI
Trigger: AATCTGACCTAGAACATTTCATGCTGGTTCGGAGAG...ATCACCACCGTTTAGACCAAGCTGTAAGGCCCTACTACAGACAGTGTTTAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR GCA 90 bp ACTGTAGTTCTAGGACATATGTATGGTCAGGACAACAGAGCAGAAGTTGATAATAACTTGGGGCGCAACTaGAGCACTAATGCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: TVVLGHMYGQDNRAEVDNNLGRN*STNACS
Trigger: GGAACAGGCATTAGTGCTGCAGTTGCGCCCCAAGTT...ATTATCAACTTCTGCTCTGTTGTCCTGACCATACATATGTCCTAGAACTACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533050.6
ENST00000627851.2
CDS-3UTR GCA 90 bp AGCTGCATTTGGGTCCTGCTGTCGCTTTTATTCTTGAACTTGAACAGGCGGCAGTATAGAGTACAAAACTaGAACAAGAGCCACAGTGAT +
Preference number: 4 (lower is better)
Translates to: SCIWVLLSLLFLNLNRRQYRVQN*NKSHSD
Trigger: ATCACTGTGGCTCTTGTTGCAGTTTTGTACTCTATA...CTGCCGCCTGTTCAAGTTCAAGAATAAAAGCGACAGCAGGACCCAAATGCAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp CTTCAACCTCTGGCTATTGTTACTTTCTGGGAATTGTGTTGGGTTCTTGTAAGTTCTATATCAGAGGCCTaGCTCCCTGTAGAAGCCATC +
Preference number: 4 (lower is better)
Translates to: LQPLAIVTFWELCWVLVSSISEA*LPVEAI
Trigger: GATGGCTTCTACAGGGAGCCAGGCCTCTGATATAGA...ACTTACAAGAACCCAACACAATTCCCAGAAAGTAACAATAGCCAGAGGTTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp TTAGAGTTTCTTACAATGACTCTAAAAGTAGAGCCAGGGTCCTGGCAAGTAAATAAAGGGCCTGGAAAGTaGTGTCATCCACAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: LEFLTMTLKVEPGSWQVNKGPGK*CHPQSS
Trigger: GCTGGACTGTGGATGACACCACTTTCCAGGCCCTTT...ATTTACTTGCCAGGACCCTGGCTCTACTTTTAGAGTCATTGTAAGAAACTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533050.6
ENST00000627851.2
CDS-3UTR TCA 90 bp TTGTTAAACACTGTCTGTAGTAGGGCCTTACAGCTTGGTCTAAACGGTGGTGATTTTCTCGAAGCTTTTTaGACTCATCTACGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: LLNTVCSRALQLGLNGGDFLEAF*THLRLL
Trigger: GAGGAGACGTAGATGAGTTCAAAAAGCTTCGAGAAA...ATCACCACCGTTTAGACCAAGCTGTAAGGCCCTACTACAGACAGTGTTTAACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR TCA 90 bp CCTGCTGTCGCTTTTATTCTTGAACTTGAACAGGCGGCAGAATATCAAGAACCATTTCTCGAAGCTTTTTaGACTCATCTACGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: PAVAFILELEQAAEYQEPFLEAF*THLRLL
Trigger: GAGGAGACGTAGATGAGTTCAAAAAGCTTCGAGAAA...TGGTTCTTGATATTCTGCCGCCTGTTCAAGTTCAAGAATAAAAGCGACAGCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR TCA 90 bp CCTTCAACCTCTGGCTATTGTTACTTTCTGGGAATTGTGTTGGGTTCTTGTAAGAAGAACCAGGTGGTATaGAGGATTACGCTGCAACAT +
Preference number: 4 (lower is better)
Translates to: PSTSGYCYFLGIVLGSCKKNQVV*RITLQH
Trigger: ATGTTGCAGCGTAATCCTTCATACCACCTGGTTCTT...CTTACAAGAACCCAACACAATTCCCAGAAAGTAACAATAGCCAGAGGTTGAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR TCA 90 bp TTAGAGTTTCTTACAATGACTCTAAAAGTAGAGCCAGGGTCCTGGCAAGTAAATCTCCTGTGCAGCTTCTaGGAAGGTATATCCGAGTCT +
Preference number: 4 (lower is better)
Translates to: LEFLTMTLKVEPGSWQVNLLCSF*EGISES
Trigger: AGACTCGGATATACCTTCTCAGAAGCTGCACAGGAG...ATTTACTTGCCAGGACCCTGGCTCTACTTTTAGAGTCATTGTAAGAAACTCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533050.6
ENST00000627851.2
CDS-3UTR TCA 90 bp ACTGTCTGTAGTAGGGCCTTACAGCTTGGTCTAAACGGTGGTGATTTCTCTAGCGTTTCGTGCAAAGAATaGCAACTTCTTTCTTTGTCA +
Preference number: 4 (lower is better)
Translates to: TVCSRALQLGLNGGDFSSVSCKE*QLLSLS
Trigger: TGACAAAGAAAGAAGTTGTCATTCTTTGCACGAAAC...GCTAGAGAAATCACCACCGTTTAGACCAAGCTGTAAGGCCCTACTACAGACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533050.6
ENST00000627851.2
CDS-3UTR GCA 90 bp ACTTTCTGGGAATTGTGTTGGGTTCTTGTAAGTTTACTTGTTAAACACTGTCTGAACTTGGGGCGCAACTaGAGCACTAATGCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: TFWELCWVLVSLLVKHCLNLGRN*STNACS
Trigger: GGAACAGGCATTAGTGCTGCAGTTGCGCCCCAAGTT...CAGACAGTGTTTAACAAGTAAACTTACAAGAACCCAACACAATTCCCAGAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR GCA 90 bp TTGTTAAACACTGTCTGTAGTAGGGCCTTACAGCTTGGTCTAAACGGTGGTGATTTTCCCCTGATCTGCTaGATACAGTTCCAAGAGATT +
Preference number: 4 (lower is better)
Translates to: LLNTVCSRALQLGLNGGDFPLIC*IQFQEI
Trigger: AATCTCTTGGAACTGTATGCAGCAGATCAGGGGAAA...ATCACCACCGTTTAGACCAAGCTGTAAGGCCCTACTACAGACAGTGTTTAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360194.8
ENST00000533050.6
CDS-3UTR CCA 90 bp GTTACTTTCTGGGAATTGTGTTGGGTTCTTGTAAGTTTACTTGTTAAACACTGTTTGAGGGCTGGAACTTaGGGCGCAACTGCAGCACTA +
Preference number: 4 (lower is better)
Translates to: VTFWELCWVLVSLLVKHCLRAGT*GATAAL
Trigger: TAGTGCTGCAGTTGCGCCCCAAGTTCCAGCCCTCAA...ACAGTGTTTAACAAGTAAACTTACAAGAACCCAACACAATTCCCAGAAAGTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp TTGTTAAACACTGTCTGTAGTAGGGCCTTACAGCTTGGTCTAAACGGTGGTGATATATCAAGAACCAGGTaGTATGAAGGATTACGCTGC +
Preference number: 4 (lower is better)
Translates to: LLNTVCSRALQLGLNGGDISRTR*YEGLRC
Trigger: GCAGCGTAATCCTTCATACCACCTGGTTCTTGATAT...ATCACCACCGTTTAGACCAAGCTGTAAGGCCCTACTACAGACAGTGTTTAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR TCA 90 bp CTTCAACCTCTGGCTATTGTTACTTTCTGGGAATTGTGTTGGGTTCTTGTAAGTGAGGTTCGCCATCGTTaGAGAATCCAAAAATCTCGT +
Preference number: 4 (lower is better)
Translates to: LQPLAIVTFWELCWVLVSEVRHR*RIQKSR
Trigger: ACGAGATTTTTGGATTCTTCAACGATGGCGAACCTC...ACTTACAAGAACCCAACACAATTCCCAGAAAGTAACAATAGCCAGAGGTTGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR TCA 90 bp TTGTTAAACACTGTCTGTAGTAGGGCCTTACAGCTTGGTCTAAACGGTGGTGATTCATGGAGACATTTCTaGAACTTTTTGCTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: LLNTVCSRALQLGLNGGDSWRHF*NFLLSS
Trigger: TGAGGAGAGCAAAAAGTTTCAGAAATGTCTCCATGA...ATCACCACCGTTTAGACCAAGCTGTAAGGCCCTACTACAGACAGTGTTTAACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR TCA 90 bp TTGTTAAACACTGTCTGTAGTAGGGCCTTACAGCTTGGTCTAAACGGTGGTGATGCCCAGGAAAAGAAATaGCTTGTTTTCGTAGAGTTT +
Preference number: 4 (lower is better)
Translates to: LLNTVCSRALQLGLNGGDAQEKK*LVFVEF
Trigger: AAACTCTACGAAAACAAGTCATTTCTTTTCCTGGGC...ATCACCACCGTTTAGACCAAGCTGTAAGGCCCTACTACAGACAGTGTTTAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR TCA 90 bp CTTCAACCTCTGGCTATTGTTACTTTCTGGGAATTGTGTTGGGTTCTTGTAAGTCTCTCCGAACCAGCATaGAATGTTCTAGGTCAGATT +
Preference number: 4 (lower is better)
Translates to: LQPLAIVTFWELCWVLVSLSEPA*NVLGQI
Trigger: AATCTGACCTAGAACATTTCATGCTGGTTCGGAGAG...ACTTACAAGAACCCAACACAATTCCCAGAAAGTAACAATAGCCAGAGGTTGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR TCA 90 bp CTTCAACCTCTGGCTATTGTTACTTTCTGGGAATTGTGTTGGGTTCTTGTAAGTCACATGTCAGTCGCTTaGAATATTCTGGAAGATCGG +
Preference number: 4 (lower is better)
Translates to: LQPLAIVTFWELCWVLVSHMSVA*NILEDR
Trigger: CCGATCTTCCAGAATATTTCAAGCGACTGACATGTG...ACTTACAAGAACCCAACACAATTCCCAGAAAGTAACAATAGCCAGAGGTTGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR TCA 90 bp ACTTTCTGGGAATTGTGTTGGGTTCTTGTAAGTTTACTTGTTAAACACTGTCTGGATGAGCCATTTAGCTaGCCTTCTCTCACCATCCCT +
Preference number: 4 (lower is better)
Translates to: TFWELCWVLVSLLVKHCLDEPFS*PSLTIP
Trigger: AGGGATGGTGAGAGAAGGTCAGCTAAATGGCTCATC...CAGACAGTGTTTAACAAGTAAACTTACAAGAACCCAACACAATTCCCAGAAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR GCA 90 bp ACTGTAGTTCTAGGACATATGTATGGTCAGGACAACAGAGCAGAAGTTGATAATCTGTTTCCCCTGATCTaGTGCATACAGTTCCAAGAG +
Preference number: 4 (lower is better)
Translates to: TVVLGHMYGQDNRAEVDNLFPLI*CIQFQE
Trigger: CTCTTGGAACTGTATGCAGCAGATCAGGGGAAACAG...ATTATCAACTTCTGCTCTGTTGTCCTGACCATACATATGTCCTAGAACTACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533050.6
CDS-3UTR CCA 90 bp ACTTTCTGGGAATTGTGTTGGGTTCTTGTAAGTTTACTTGTTAAACACTGTCTGCCGCCCTTCAACCTCTaGCTATTGTTACTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: TFWELCWVLVSLLVKHCLPPFNL*LLLLSG
Trigger: CCCAGAAAGTAACAATAGCCAGAGGTTGAAGGGCGG...CAGACAGTGTTTAACAAGTAAACTTACAAGAACCCAACACAATTCCCAGAAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp ACTTTCTGGGAATTGTGTTGGGTTCTTGTAAGTTTACTTGTTAAACACTGTCTGGTTGGGAGCTGCATTTaGGTCCTGCTGTCGCTTTTA +
Preference number: 4 (lower is better)
Translates to: TFWELCWVLVSLLVKHCLVGSCI*VLLSLL
Trigger: TAAAAGCGACAGCAGGACCCAAATGCAGCTCCCAAC...CAGACAGTGTTTAACAAGTAAACTTACAAGAACCCAACACAATTCCCAGAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR TCA 90 bp CCTGCTGTCGCTTTTATTCTTGAACTTGAACAGGCGGCAGAATATCAAGAACCAAGAATCTTCCATCTTTaGCTCCAAGTCATCAAATAC +
Preference number: 4 (lower is better)
Translates to: PAVAFILELEQAAEYQEPRIFHL*LQVIKY
Trigger: GTATTTGATGACTTGGAGTCAAAGATGGAAGATTCT...TGGTTCTTGATATTCTGCCGCCTGTTCAAGTTCAAGAATAAAAGCGACAGCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360194.8
ENST00000533050.6
CDS-3UTR CCA 90 bp GTTACTTTCTGGGAATTGTGTTGGGTTCTTGTAAGTTTACTTGTTAAACACTGTTTGGAAGCAGCTTCCTaGGCTTTTTGGTGGGAGGTT +
Preference number: 4 (lower is better)
Translates to: VTFWELCWVLVSLLVKHCLEAAS*AFWWEV
Trigger: AACCTCCCACCAAAAAGCCCAGGAAGCTGCTTCCAA...ACAGTGTTTAACAAGTAAACTTACAAGAACCCAACACAATTCCCAGAAAGTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp CCTTCAACCTCTGGCTATTGTTACTTTCTGGGAATTGTGTTGGGTTCTTGTAAGAAAGATCAAAATCAATaGCAGCATCCAGTAAGGCCT +
Preference number: 4 (lower is better)
Translates to: PSTSGYCYFLGIVLGSCKKDQNQ*QHPVRP
Trigger: AGGCCTTACTGGATGCTGCCATTGATTTTGATCTTT...CTTACAAGAACCCAACACAATTCCCAGAAAGTAACAATAGCCAGAGGTTGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp ACTTTCTGGGAATTGTGTTGGGTTCTTGTAAGTTTACTTGTTAAACACTGTCTGTTCTGGATAAGGTCATaGGCAACATGGACCAGGTTC +
Preference number: 4 (lower is better)
Translates to: TFWELCWVLVSLLVKHCLFWIRS*ATWTRF
Trigger: GAACCTGGTCCATGTTGCCCATGACCTTATCCAGAA...CAGACAGTGTTTAACAAGTAAACTTACAAGAACCCAACACAATTCCCAGAAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp ACTTTCTGGGAATTGTGTTGGGTTCTTGTAAGTTTACTTGTTAAACACTGTCTGCGAGGAGAGAGTTTCTaGATAAGGTCATGGGCAACA +
Preference number: 4 (lower is better)
Translates to: TFWELCWVLVSLLVKHCLRGESF*IRSWAT
Trigger: TGTTGCCCATGACCTTATCCAGAAACTCTCTCCTCG...CAGACAGTGTTTAACAAGTAAACTTACAAGAACCCAACACAATTCCCAGAAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360194.8
ENST00000533050.6
CDS-3UTR TCA 90 bp ACTTTCTGGGAATTGTGTTGGGTTCTTGTAAGTTTACTTGTTAAACACTGTCTGCTCTCCGAACCAGCATaGAATGTTCTAGGTCAGATT +
Preference number: 4 (lower is better)
Translates to: TFWELCWVLVSLLVKHCLLSEPA*NVLGQI
Trigger: AATCTGACCTAGAACATTTCATGCTGGTTCGGAGAG...CAGACAGTGTTTAACAAGTAAACTTACAAGAACCCAACACAATTCCCAGAAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR TCA 90 bp ACTTTCTGGGAATTGTGTTGGGTTCTTGTAAGTTTACTTGTTAAACACTGTCTGCACATGTCAGTCGCTTaGAATATTCTGGAAGATCGG +
Preference number: 4 (lower is better)
Translates to: TFWELCWVLVSLLVKHCLHMSVA*NILEDR
Trigger: CCGATCTTCCAGAATATTTCAAGCGACTGACATGTG...CAGACAGTGTTTAACAAGTAAACTTACAAGAACCCAACACAATTCCCAGAAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp GTTACTTTCTGGGAATTGTGTTGGGTTCTTGTAAGTTTACTTGTTAAACACTGTAGGTCATGGGCAACATaGACCAGGTTCTTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: VTFWELCWVLVSLLVKHCRSWAT*TRFLSS
Trigger: TGAAGACAAGAACCTGGTCCATGTTGCCCATGACCT...ACAGTGTTTAACAAGTAAACTTACAAGAACCCAACACAATTCCCAGAAAGTAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp ACTTTCTGGGAATTGTGTTGGGTTCTTGTAAGTTTACTTGTTAAACACTGTCTGACAGGAGAGAGTTTCTaGATAAGGTCATGGGCAACA +
Preference number: 4 (lower is better)
Translates to: TFWELCWVLVSLLVKHCLTGESF*IRSWAT
Trigger: TGTTGCCCATGACCTTATCCAGAAACTCTCTCCTGT...CAGACAGTGTTTAACAAGTAAACTTACAAGAACCCAACACAATTCCCAGAAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529731.5
ENST00000627851.2
CDS-3UTR TCA 90 bp ACTGTAGTTCTAGGACATATGTATGGTCAGGACAACAGAGCAGAAGTTGATAATTCATGGAGACATTTCTaGAACTTTTTGCTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: TVVLGHMYGQDNRAEVDNSWRHF*NFLLSS
Trigger: TGAGGAGAGCAAAAAGTTTCAGAAATGTCTCCATGA...ATTATCAACTTCTGCTCTGTTGTCCTGACCATACATATGTCCTAGAACTACAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000533050.6
ENST00000627851.2
CDS-3UTR TCA 90 bp GTTACTTTCTGGGAATTGTGTTGGGTTCTTGTAAGTTTACTTGTTAAACACTGTAGGTGGAGAACTGACTaGAGTAGCTGTTTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: VTFWELCWVLVSLLVKHCRWRTD*SSCFPE
Trigger: TTCTGGAAAACAGCTACTTCAGTCAGTTCTCCACCT...ACAGTGTTTAACAAGTAAACTTACAAGAACCCAACACAATTCCCAGAAAGTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360194.8
ENST00000533050.6
CDS-3UTR TCA 90 bp GTTACTTTCTGGGAATTGTGTTGGGTTCTTGTAAGTTTACTTGTTAAACACTGTTTTCTCGAAGCTTTTTaGACTCATCTACGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: VTFWELCWVLVSLLVKHCFLEAF*THLRLL
Trigger: GAGGAGACGTAGATGAGTTCAAAAAGCTTCGAGAAA...ACAGTGTTTAACAAGTAAACTTACAAGAACCCAACACAATTCCCAGAAAGTAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp CTTCAACCTCTGGCTATTGTTACTTTCTGGGAATTGTGTTGGGTTCTTGTAAGTTTCTGGGAATTGTGTTaGGTTCTTGTAAGTTTACTT +
Preference number: 4 (lower is better)
Translates to: LQPLAIVTFWELCWVLVSFWELC*VLVSLL
Trigger: AAGTAAACTTACAAGAACCCAACACAATTCCCAGAA...ACTTACAAGAACCCAACACAATTCCCAGAAAGTAACAATAGCCAGAGGTTGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp GTTACTTTCTGGGAATTGTGTTGGGTTCTTGTAAGTTTACTTGTTAAACACTGTATATCAAGAACCAGGTaGTATGAAGGATTACGCTGC +
Preference number: 4 (lower is better)
Translates to: VTFWELCWVLVSLLVKHCISRTR*YEGLRC
Trigger: GCAGCGTAATCCTTCATACCACCTGGTTCTTGATAT...ACAGTGTTTAACAAGTAAACTTACAAGAACCCAACACAATTCCCAGAAAGTAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR TCA 90 bp GTTACTTTCTGGGAATTGTGTTGGGTTCTTGTAAGTTTACTTGTTAAACACTGTGCCCAGGAAAAGAAATaGCTTGTTTTCGTAGAGTTT +
Preference number: 4 (lower is better)
Translates to: VTFWELCWVLVSLLVKHCAQEKK*LVFVEF
Trigger: AAACTCTACGAAAACAAGTCATTTCTTTTCCTGGGC...ACAGTGTTTAACAAGTAAACTTACAAGAACCCAACACAATTCCCAGAAAGTAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp GTTACTTTCTGGGAATTGTGTTGGGTTCTTGTAAGTTTACTTGTTAAACACTGTAAAGATCAAAATCAATaGCAGCATCCAGTAAGGCCT +
Preference number: 4 (lower is better)
Translates to: VTFWELCWVLVSLLVKHCKDQNQ*QHPVRP
Trigger: AGGCCTTACTGGATGCTGCCATTGATTTTGATCTTT...ACAGTGTTTAACAAGTAAACTTACAAGAACCCAACACAATTCCCAGAAAGTAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CCA 90 bp TTAGAGTTTCTTACAATGACTCTAAAAGTAGAGCCAGGGTCCTGGCAAGTAAATTTCTGGGAATTGTGTTaGGTTCTTGTAAGTTTACTT +
Preference number: 4 (lower is better)
Translates to: LEFLTMTLKVEPGSWQVNFWELC*VLVSLL
Trigger: AAGTAAACTTACAAGAACCCAACACAATTCCCAGAA...ATTTACTTGCCAGGACCCTGGCTCTACTTTTAGAGTCATTGTAAGAAACTCTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CAA 90 bp GCATCCAGACCCCGAGTCCTTCATGCAGAGCTGCAGCCGGTCAGTGGAAGTATCAACCCCTTCCAGGATTaGAGGGCTGGAACTTGGGGC +
Preference number: 5 (lower is better)
Translates to: ASRPRVLHAELQPVSGSINPFQD*RAGTWG
Trigger: GCCCCAAGTTCCAGCCCTCAAATCCTGGAAGGGGTT...GATACTTCCACTGACCGGCTGCAGCTCTGCATGAAGGACTCGGGGTCTGGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CAA 90 bp TTCATGCAGAGCTGCAGCCGGTCAGTGGAAGTATCACATTGGTGTGCTGTGTGGAACCCCTTCCAGGATTaGAGGGCTGGAACTTGGGGC +
Preference number: 5 (lower is better)
Translates to: FMQSCSRSVEVSHWCAVWNPFQD*RAGTWG
Trigger: GCCCCAAGTTCCAGCCCTCAAATCCTGGAAGGGGTT...CCACACAGCACACCAATGTGATACTTCCACTGACCGGCTGCAGCTCTGCATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CAA 90 bp GCATCCAGACCCCGAGTCCTTCATGCAGAGCTGCAGCCGGTCAGTGGAAGTATCGGAGGTTCGCCATCGTaGAAGAATCCAAAAATCTCG +
Preference number: 5 (lower is better)
Translates to: ASRPRVLHAELQPVSGSIGGSPS*KNPKIS
Trigger: CGAGATTTTTGGATTCTTCAACGATGGCGAACCTCC...GATACTTCCACTGACCGGCTGCAGCTCTGCATGAAGGACTCGGGGTCTGGATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CAA 90 bp GCATCCAGACCCCGAGTCCTTCATGCAGAGCTGCAGCCGGTCAGTGGAAGTATCACATGGACCAGGTTCTaGTCTTCATGGAGACATTTC +
Preference number: 5 (lower is better)
Translates to: ASRPRVLHAELQPVSGSITWTRF*SSWRHF
Trigger: GAAATGTCTCCATGAAGACAAGAACCTGGTCCATGT...GATACTTCCACTGACCGGCTGCAGCTCTGCATGAAGGACTCGGGGTCTGGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CAA 90 bp GTGTGCTGTGTGGACACAAGCATGTCTAGCCTGGGGAGTGGGTTGGGAGCTGCAACATGGACCAGGTTCTaGTCTTCATGGAGACATTTC +
Preference number: 5 (lower is better)
Translates to: VCCVDTSMSSLGSGLGAATWTRF*SSWRHF
Trigger: GAAATGTCTCCATGAAGACAAGAACCTGGTCCATGT...TGCAGCTCCCAACCCACTCCCCAGGCTAGACATGCTTGTGTCCACACAGCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CAA 90 bp GTGTGCTGTGTGGACACAAGCATGTCTAGCCTGGGGAGTGGGTTGGGAGCTGCAAGGTCAGATTTATGCTaGACAGCCTCCAAGAAAAGG +
Preference number: 5 (lower is better)
Translates to: VCCVDTSMSSLGSGLGAARSDLC*TASKKR
Trigger: CCTTTTCTTGGAGGCTGTCAAGCATAAATCTGACCT...TGCAGCTCCCAACCCACTCCCCAGGCTAGACATGCTTGTGTCCACACAGCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CAA 90 bp ACTGTCTGTAGTAGGGCCTTACAGCTTGGTCTAAACGGTGGTGATTTCTCTAGCAACCCCTTCCAGGATTaGAGGGCTGGAACTTGGGGC +
Preference number: 5 (lower is better)
Translates to: TVCSRALQLGLNGGDFSSNPFQD*RAGTWG
Trigger: GCCCCAAGTTCCAGCCCTCAAATCCTGGAAGGGGTT...GCTAGAGAAATCACCACCGTTTAGACCAAGCTGTAAGGCCCTACTACAGACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CAA 90 bp GTGTGCTGTGTGGACACAAGCATGTCTAGCCTGGGGAGTGGGTTGGGAGCTGCATCACATGTCAGTCGCTaGAAATATTCTGGAAGATCG +
Preference number: 5 (lower is better)
Translates to: VCCVDTSMSSLGSGLGAASHVSR*KYSGRS
Trigger: CGATCTTCCAGAATATTTCAAGCGACTGACATGTGA...TGCAGCTCCCAACCCACTCCCCAGGCTAGACATGCTTGTGTCCACACAGCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CAA 90 bp ATCCAGACCCCGAGTCCTTCATGCAGAGCTGCAGCCGGTCAGTGGAAGTATCACACAACAGAGCAGAAGTaGATAATGCTCCGAGGAATC +
Preference number: 5 (lower is better)
Translates to: IQTPSPSCRAAAGQWKYHTTEQK*IMLRGI
Trigger: GATTCCTCGGAGCATTATCAACTTCTGCTCTGTTGT...GTGATACTTCCACTGACCGGCTGCAGCTCTGCATGAAGGACTCGGGGTCTGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533050.6
ENST00000627851.2
CDS TCA 90 bp TTGGAAGCAGCTTCCTGGGCTTTTTGGTGGGAGGTTCGCCATCGTTaGAGAATCCAAAAATCTCGTCTATATCAGAGGCCTGGCTCCCTG +
Preference number: 5 (lower is better)
Translates to: LEAASWAFWWEVRHR*RIQKSRLYQRPGSL
Trigger: CAGGGAGCCAGGCCTCTGATATAGACGAGATTTTTGGATTCTTCAACGATGGCGAACCTCCCACCAAAAAGCCCAGGAAGCTGCTTCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000360194.8
ENST00000525338.1
ENST00000527247.5
ENST00000528985.5
ENST00000529731.5
ENST00000530043.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CAA 90 bp AACACTGTCTGTAGTAGGGCCTTACAGCTTGGTCTAAACGGTGGTGATTTCTCTAGCTTCCTGGGCTTTTaGGTGGGAGGTTCGCCATCG +
Preference number: 5 (lower is better)
Translates to: NTVCSRALQLGLNGGDFSSFLGF*VGGSPS
Trigger: CGATGGCGAACCTCCCACCAAAAAGCCCAGGAAGCT...AGAGAAATCACCACCGTTTAGACCAAGCTGTAAGGCCCTACTACAGACAGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CAA 90 bp GCATCCAGACCCCGAGTCCTTCATGCAGAGCTGCAGCCGGTCAGTGGAAGTATCCTTTTATTCTTGAACTaGAACAGGCGGCAGAATATC +
Preference number: 5 (lower is better)
Translates to: ASRPRVLHAELQPVSGSILLFLN*NRRQNI
Trigger: GATATTCTGCCGCCTGTTCAAGTTCAAGAATAAAAG...GATACTTCCACTGACCGGCTGCAGCTCTGCATGAAGGACTCGGGGTCTGGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CAA 90 bp TTCATGCAGAGCTGCAGCCGGTCAGTGGAAGTATCACATTGGTGTGCTGTGTGGCTGTCGCTTTTATTCTaGAACTTGAACAGGCGGCAG +
Preference number: 5 (lower is better)
Translates to: FMQSCSRSVEVSHWCAVWLSLLF*NLNRRQ
Trigger: CTGCCGCCTGTTCAAGTTCAAGAATAAAAGCGACAG...CCACACAGCACACCAATGTGATACTTCCACTGACCGGCTGCAGCTCTGCATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CAA 90 bp GGGAGCTGCATTTGGGTCCTGCTGTCGCTTTTATTCTTGAACTTGAACAGGCGGCTGCTGATGTACCCCTaGTGGAGATCTCACATGTCA +
Preference number: 5 (lower is better)
Translates to: GSCIWVLLSLLFLNLNRRLLMYP*WRSHMS
Trigger: TGACATGTGAGATCTCCACAAGGGGTACATCAGCAG...CCGCCTGTTCAAGTTCAAGAATAAAAGCGACAGCAGGACCCAAATGCAGCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533050.6
ENST00000627851.2
CDS TCA 90 bp CTACAGCCTCTTATTTCACTGTGTGCTGCAGATGAGCCATTTAGCTaGCCTTCTCTCACCATCCCTGCTGATGTACCCCTTGTGGAGATC +
Preference number: 5 (lower is better)
Translates to: LQPLISLCAADEPFS*PSLTIPADVPLVEI
Trigger: GATCTCCACAAGGGGTACATCAGCAGGGATGGTGAGAGAAGGTCAGCTAAATGGCTCATCTGCAGCACACAGTGAAATAAGAGGCTGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS CCA 90 bp TCGCCATCGTTGAAGAATCCAAAAATCTCGTCTATATCAGAGGCCTaGCTCCCTGTAGAAGCCATCCAGTTTCGAGTCTCCTCCAAACGC +
Preference number: 5 (lower is better)
Translates to: SPSLKNPKISSISEA*LPVEAIQFRVSSKR
Trigger: GCGTTTGGAGGAGACTCGAAACTGGATGGCTTCTACAGGGAGCCAGGCCTCTGATATAGACGAGATTTTTGGATTCTTCAACGATGGCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360194.8
ENST00000529731.5
CDS-3UTR CAA 90 bp AGCTGCATTTGGGTCCTGCTGTCGCTTTTATTCTTGAACTTGAACAGGCGGCAGTCCCTGATGTACCCCTaGTGGAGATCTCACATGTCA +
Preference number: 5 (lower is better)
Translates to: SCIWVLLSLLFLNLNRRQSLMYP*WRSHMS
Trigger: TGACATGTGAGATCTCCACAAGGGGTACATCAGGGA...CTGCCGCCTGTTCAAGTTCAAGAATAAAAGCGACAGCAGGACCCAAATGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360194.8
CDS GCA 90 bp ACGTCTCCTCTCCGAACCAGCATGAAATGTTCTAGGTCAGATTTATaGTTGACAGCCTCCAAGAAAAGGGCCTGGAAAGTGGTGTCATCC +
Preference number: 5 (lower is better)
Translates to: TSPLRTSMKCSRSDL*LTASKKRAWKVVSS
Trigger: GGATGACACCACTTTCCAGGCCCTTTTCTTGGAGGCTGTCAAGCATAAATCTGACCTAGAACATTTCATGCTGGTTCGGAGAGGAGACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360194.8
ENST00000525338.1
ENST00000528985.5
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS CCA 90 bp TCGCCATCGTTGAAGAATCCAAAAATCTCGTCTATATCAGAGGCCTaGCTCCCTGTAGAAGCCATCCAGTTTCCCATAGTCCATCACACG +
Preference number: 5 (lower is better)
Translates to: SPSLKNPKISSISEA*LPVEAIQFPIVHHT
Trigger: CGTGTGATGGACTATGGGAAACTGGATGGCTTCTACAGGGAGCCAGGCCTCTGATATAGACGAGATTTTTGGATTCTTCAACGATGGCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528985.5
CDS-3UTR CAA 90 bp CCTTCAACCTCTGGCTATTGTTACTTTCTGGGAATTGTGTTGGGTTCTTGTAAGTTTGAGGGCTGGAACTaGGGGCGCAACTGCAGCACT +
Preference number: 5 (lower is better)
Translates to: PSTSGYCYFLGIVLGSCKFEGWN*GRNCST
Trigger: AGTGCTGCAGTTGCGCCCCAAGTTCCAGCCCTCAAA...CTTACAAGAACCCAACACAATTCCCAGAAAGTAACAATAGCCAGAGGTTGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CAA 90 bp CCTTCAACCTCTGGCTATTGTTACTTTCTGGGAATTGTGTTGGGTTCTTGTAAGAACCCCTTCCAGGATTaGAGGGCTGGAACTTGGGGC +
Preference number: 5 (lower is better)
Translates to: PSTSGYCYFLGIVLGSCKNPFQD*RAGTWG
Trigger: GCCCCAAGTTCCAGCCCTCAAATCCTGGAAGGGGTT...CTTACAAGAACCCAACACAATTCCCAGAAAGTAACAATAGCCAGAGGTTGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CAA 90 bp TTCATGCAGAGCTGCAGCCGGTCAGTGGAAGTATCACATTGGTGTGCTGTGTGGATGACTTTAATCCCCTaGTCCAGCATGTTTTCTCGA +
Preference number: 5 (lower is better)
Translates to: FMQSCSRSVEVSHWCAVWMTLIP*SSMFSR
Trigger: TCGAGAAAACATGCTGGACAAGGGGATTAAAGTCAT...CCACACAGCACACCAATGTGATACTTCCACTGACCGGCTGCAGCTCTGCATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CAA 90 bp GTCTGTAGTAGGGCCTTACAGCTTGGTCTAAACGGTGGTGATTTCTCTAGCTCGCTGTCGCTTTTATTCTaGAACTTGAACAGGCGGCAG +
Preference number: 5 (lower is better)
Translates to: VCSRALQLGLNGGDFSSSLSLLF*NLNRRQ
Trigger: CTGCCGCCTGTTCAAGTTCAAGAATAAAAGCGACAG...CGAGCTAGAGAAATCACCACCGTTTAGACCAAGCTGTAAGGCCCTACTACAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS GCA 90 bp GGAAGCAGCTTCCGTGCAAAGAATGACAACTTCTTTCTTTGTCACTaGTTTCCTCCTGTGCAGCTTCTGAGAAGGTATATCCGAGTCTCC +
Preference number: 5 (lower is better)
Translates to: GSSFRAKNDNFFLCH*FPPVQLLRRYIRVS
Trigger: GGAGACTCGGATATACCTTCTCAGAAGCTGCACAGGAGGAAAGCAGTGACAAAGAAAGAAGTTGTCATTCTTTGCACGGAAGCTGCTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525728.5
CDS CCA 90 bp CCAAATACTGTGGCACATACTAGGGTACTCACAGGAGAGAGTTTCTaGATAAGGTCATGGGCAACATGGACCAGGTTCTTGTCTTCATGG +
Preference number: 5 (lower is better)
Translates to: PNTVAHTRVLTGESF*IRSWATWTRFLSSW
Trigger: CCATGAAGACAAGAACCTGGTCCATGTTGCCCATGACCTTATCCAGAAACTCTCTCCTGTGAGTACCCTAGTATGTGCCACAGTATTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527247.5
CDS-3UTR CAA 90 bp ACTGTCTGTAGTAGGGCCTTACAGCTTGGTCTAAACGGTGGTGATTTCTCTAGCGGAGGTTCGCCATCGTaGAAGAATCCAAAAATCTCG +
Preference number: 5 (lower is better)
Translates to: TVCSRALQLGLNGGDFSSGGSPS*KNPKIS
Trigger: CGAGATTTTTGGATTCTTCAACGATGGCGAACCTCC...GCTAGAGAAATCACCACCGTTTAGACCAAGCTGTAAGGCCCTACTACAGACAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CAA 90 bp AGCTGCATTTGGGTCCTGCTGTCGCTTTTATTCTTGAACTTGAACAGGCGGCAGACATGGACCAGGTTCTaGTCTTCATGGAGACATTTC +
Preference number: 5 (lower is better)
Translates to: SCIWVLLSLLFLNLNRRQTWTRF*SSWRHF
Trigger: GAAATGTCTCCATGAAGACAAGAACCTGGTCCATGT...CTGCCGCCTGTTCAAGTTCAAGAATAAAAGCGACAGCAGGACCCAAATGCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CAA 90 bp GTCTGTAGTAGGGCCTTACAGCTTGGTCTAAACGGTGGTGATTTCTCTAGCTCGAGGTCAGATTTATGCTaGACAGCCTCCAAGAAAAGG +
Preference number: 5 (lower is better)
Translates to: VCSRALQLGLNGGDFSSSRSDLC*TASKKR
Trigger: CCTTTTCTTGGAGGCTGTCAAGCATAAATCTGACCT...CGAGCTAGAGAAATCACCACCGTTTAGACCAAGCTGTAAGGCCCTACTACAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CAA 90 bp ATGCAGAGCTGCAGCCGGTCAGTGGAAGTATCACATTGGTGTGCTGTGTGGACAGTTACTTTCTGGGAATaGTGTTGGGTTCTTGTAAGT +
Preference number: 5 (lower is better)
Translates to: MQSCSRSVEVSHWCAVWTVTFWE*CWVLVS
Trigger: ACTTACAAGAACCCAACACAATTCCCAGAAAGTAAC...TGTCCACACAGCACACCAATGTGATACTTCCACTGACCGGCTGCAGCTCTGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CAA 90 bp ATGCAGAGCTGCAGCCGGTCAGTGGAAGTATCACATTGGTGTGCTGTGTGGACATTCAACCTCTGGCTATaGTTACTTTCTGGGAATTGT +
Preference number: 5 (lower is better)
Translates to: MQSCSRSVEVSHWCAVWTFNLWL*LLSGNC
Trigger: ACAATTCCCAGAAAGTAACAATAGCCAGAGGTTGAA...TGTCCACACAGCACACCAATGTGATACTTCCACTGACCGGCTGCAGCTCTGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS GCA 90 bp GCCATCCAGTTTCGTGCAAAGAATGACAACTTCTTTCTTTGTCACTaGTTTCCTCCTGTGCAGCTTCTGAGAAGGTATATCCGAGTCTCC +
Preference number: 5 (lower is better)
Translates to: AIQFRAKNDNFFLCH*FPPVQLLRRYIRVS
Trigger: GGAGACTCGGATATACCTTCTCAGAAGCTGCACAGGAGGAAAGCAGTGACAAAGAAAGAAGTTGTCATTCTTTGCACGAAACTGGATGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533050.6
ENST00000627851.2
CDS CCA 90 bp TCGCCATCGTTGAAGAATCCAAAAATCTCGTCTATATCAGAGGCCTaGCTCCCTGTAGAAGCCATCCAGTTTCGTGCAAAGAATGACAAC +
Preference number: 5 (lower is better)
Translates to: SPSLKNPKISSISEA*LPVEAIQFRAKNDN
Trigger: GTTGTCATTCTTTGCACGAAACTGGATGGCTTCTACAGGGAGCCAGGCCTCTGATATAGACGAGATTTTTGGATTCTTCAACGATGGCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000525338.1
ENST00000527247.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CAA 90 bp AACACTGTCTGTAGTAGGGCCTTACAGCTTGGTCTAAACGGTGGTGATTTCTCTGGAGGTTCGCCATCGTaGAAGAATCCAAAAATCTCG +
Preference number: 5 (lower is better)
Translates to: NTVCSRALQLGLNGGDFSGGSPS*KNPKIS
Trigger: CGAGATTTTTGGATTCTTCAACGATGGCGAACCTCC...AGAGAAATCACCACCGTTTAGACCAAGCTGTAAGGCCCTACTACAGACAGTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CAA 90 bp AGCTGCATTTGGGTCCTGCTGTCGCTTTTATTCTTGAACTTGAACAGGCGGCAGTCACATGTCAGTCGCTaGAAATATTCTGGAAGATCG +
Preference number: 5 (lower is better)
Translates to: SCIWVLLSLLFLNLNRRQSHVSR*KYSGRS
Trigger: CGATCTTCCAGAATATTTCAAGCGACTGACATGTGA...CTGCCGCCTGTTCAAGTTCAAGAATAAAAGCGACAGCAGGACCCAAATGCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CAA 90 bp GTCTGTAGTAGGGCCTTACAGCTTGGTCTAAACGGTGGTGATTTCTCTAGCTCGTCACATGTCAGTCGCTaGAAATATTCTGGAAGATCG +
Preference number: 5 (lower is better)
Translates to: VCSRALQLGLNGGDFSSSSHVSR*KYSGRS
Trigger: CGATCTTCCAGAATATTTCAAGCGACTGACATGTGA...CGAGCTAGAGAAATCACCACCGTTTAGACCAAGCTGTAAGGCCCTACTACAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CAA 90 bp TTCATGCAGAGCTGCAGCCGGTCAGTGGAAGTATCACATTGGTGTGCTGTGTGGTTTCTGGGAATTGTGTaGGGTTCTTGTAAGTTTACT +
Preference number: 5 (lower is better)
Translates to: FMQSCSRSVEVSHWCAVWFLGIV*GSCKFT
Trigger: AGTAAACTTACAAGAACCCAACACAATTCCCAGAAA...CCACACAGCACACCAATGTGATACTTCCACTGACCGGCTGCAGCTCTGCATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS GCA 90 bp TTGGTGAGAAAGCGTGCAAAGAATGACAACTTCTTTCTTTGTCACTaGTTTCCTCCTGTGCAGCTTCTGAGAAGGTATATCCGAGTCTCC +
Preference number: 5 (lower is better)
Translates to: LVRKRAKNDNFFLCH*FPPVQLLRRYIRVS
Trigger: GGAGACTCGGATATACCTTCTCAGAAGCTGCACAGGAGGAAAGCAGTGACAAAGAAAGAAGTTGTCATTCTTTGCACGCTTTCTCACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528985.5
CDS-3UTR CAA 90 bp ACTTTCTGGGAATTGTGTTGGGTTCTTGTAAGTTTACTTGTTAAACACTGTCTGTTTGAGGGCTGGAACTaGGGGCGCAACTGCAGCACT +
Preference number: 5 (lower is better)
Translates to: TFWELCWVLVSLLVKHCLFEGWN*GRNCST
Trigger: AGTGCTGCAGTTGCGCCCCAAGTTCCAGCCCTCAAA...CAGACAGTGTTTAACAAGTAAACTTACAAGAACCCAACACAATTCCCAGAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CAA 90 bp AGCTGCATTTGGGTCCTGCTGTCGCTTTTATTCTTGAACTTGAACAGGCGGCAGTTTTCTCGAAGCTTTTaGAACTCATCTACGTCTCCT +
Preference number: 5 (lower is better)
Translates to: SCIWVLLSLLFLNLNRRQFSRSF*NSSTSP
Trigger: AGGAGACGTAGATGAGTTCAAAAAGCTTCGAGAAAA...CTGCCGCCTGTTCAAGTTCAAGAATAAAAGCGACAGCAGGACCCAAATGCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CAA 90 bp GGAGTGGGTTGGGAGCTGCATTTGGGTCCTGCTGTCGCTTTTATTCTTGAACTTTTTTCTCGAAGCTTTTaGAACTCATCTACGTCTCCT +
Preference number: 5 (lower is better)
Translates to: GVGWELHLGPAVAFILELFSRSF*NSSTSP
Trigger: AGGAGACGTAGATGAGTTCAAAAAGCTTCGAGAAAA...AAGTTCAAGAATAAAAGCGACAGCAGGACCCAAATGCAGCTCCCAACCCACTCC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CAA 90 bp GGGAGCTGCATTTGGGTCCTGCTGTCGCTTTTATTCTTGAACTTGAACAGGCGGTTTCTGGGAATTGTGTaGGGTTCTTGTAAGTTTACT +
Preference number: 5 (lower is better)
Translates to: GSCIWVLLSLLFLNLNRRFLGIV*GSCKFT
Trigger: AGTAAACTTACAAGAACCCAACACAATTCCCAGAAA...CCGCCTGTTCAAGTTCAAGAATAAAAGCGACAGCAGGACCCAAATGCAGCTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CAA 90 bp AGCTGCATTTGGGTCCTGCTGTCGCTTTTATTCTTGAACTTGAACAGGCGGCAGGTTACTTTCTGGGAATaGTGTTGGGTTCTTGTAAGT +
Preference number: 5 (lower is better)
Translates to: SCIWVLLSLLFLNLNRRQVTFWE*CWVLVS
Trigger: ACTTACAAGAACCCAACACAATTCCCAGAAAGTAAC...CTGCCGCCTGTTCAAGTTCAAGAATAAAAGCGACAGCAGGACCCAAATGCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CAA 90 bp AGCTGCATTTGGGTCCTGCTGTCGCTTTTATTCTTGAACTTGAACAGGCGGCAGTTCAACCTCTGGCTATaGTTACTTTCTGGGAATTGT +
Preference number: 5 (lower is better)
Translates to: SCIWVLLSLLFLNLNRRQFNLWL*LLSGNC
Trigger: ACAATTCCCAGAAAGTAACAATAGCCAGAGGTTGAA...CTGCCGCCTGTTCAAGTTCAAGAATAAAAGCGACAGCAGGACCCAAATGCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CAA 90 bp AGCTGCATTTGGGTCCTGCTGTCGCTTTTATTCTTGAACTTGAACAGGCGGCAGCTTTTATTCTTGAACTaGAACAGGCGGCAGAATATC +
Preference number: 5 (lower is better)
Translates to: SCIWVLLSLLFLNLNRRQLLFLN*NRRQNI
Trigger: GATATTCTGCCGCCTGTTCAAGTTCAAGAATAAAAG...CTGCCGCCTGTTCAAGTTCAAGAATAAAAGCGACAGCAGGACCCAAATGCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS CCA 90 bp TCCTCAGTCACACTGGCCACATTTCAACGGTGCACCAGCCACATGTaGCTCCTAACTATGATACTAGACAGTGAAGATTATACAGTATTT +
Preference number: 5 (lower is better)
Translates to: SSVTLATFQRCTSHM*LLTMILDSEDYTVF
Trigger: AAATACTGTATAATCTTCACTGTCTAGTATCATAGTTAGGAGCCACATGTGGCTGGTGCACCGTTGAAATGTGGCCAGTGTGACTGAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531935.1
CDS-3UTR CAA 90 bp CCTTCAACCTCTGGCTATTGTTACTTTCTGGGAATTGTGTTGGGTTCTTGTAAGGGAGGTTCGCCATCGTaGAAGAATCCAAAAATCTCG +
Preference number: 5 (lower is better)
Translates to: PSTSGYCYFLGIVLGSCKGGSPS*KNPKIS
Trigger: CGAGATTTTTGGATTCTTCAACGATGGCGAACCTCC...CTTACAAGAACCCAACACAATTCCCAGAAAGTAACAATAGCCAGAGGTTGAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CAA 90 bp GTTACTTTCTGGGAATTGTGTTGGGTTCTTGTAAGTTTACTTGTTAAACACTGTTTTGAGGGCTGGAACTaGGGGCGCAACTGCAGCACT +
Preference number: 5 (lower is better)
Translates to: VTFWELCWVLVSLLVKHCFEGWN*GRNCST
Trigger: AGTGCTGCAGTTGCGCCCCAAGTTCCAGCCCTCAAA...ACAGTGTTTAACAAGTAAACTTACAAGAACCCAACACAATTCCCAGAAAGTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CAA 90 bp AACACTGTCTGTAGTAGGGCCTTACAGCTTGGTCTAAACGGTGGTGATTTCTCTATGACTTTAATCCCCTaGTCCAGCATGTTTTCTCGA +
Preference number: 5 (lower is better)
Translates to: NTVCSRALQLGLNGGDFSMTLIP*SSMFSR
Trigger: TCGAGAAAACATGCTGGACAAGGGGATTAAAGTCAT...AGAGAAATCACCACCGTTTAGACCAAGCTGTAAGGCCCTACTACAGACAGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CAA 90 bp CCTTCAACCTCTGGCTATTGTTACTTTCTGGGAATTGTGTTGGGTTCTTGTAAGACATGGACCAGGTTCTaGTCTTCATGGAGACATTTC +
Preference number: 5 (lower is better)
Translates to: PSTSGYCYFLGIVLGSCKTWTRF*SSWRHF
Trigger: GAAATGTCTCCATGAAGACAAGAACCTGGTCCATGT...CTTACAAGAACCCAACACAATTCCCAGAAAGTAACAATAGCCAGAGGTTGAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CAA 90 bp TTGTTAAACACTGTCTGTAGTAGGGCCTTACAGCTTGGTCTAAACGGTGGTGATATGACTTTAATCCCCTaGTCCAGCATGTTTTCTCGA +
Preference number: 5 (lower is better)
Translates to: LLNTVCSRALQLGLNGGDMTLIP*SSMFSR
Trigger: TCGAGAAAACATGCTGGACAAGGGGATTAAAGTCAT...ATCACCACCGTTTAGACCAAGCTGTAAGGCCCTACTACAGACAGTGTTTAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS TCA 90 bp GGGATGGGCAAATGGCATGTGAGTGAGCAACTTCAAATAGAAGAGTaGAAAGCAGCAGAATACTCCCACAAAATAAAATACGGTAGCACT +
Preference number: 5 (lower is better)
Translates to: GMGKWHVSEQLQIEE*KAAEYSHKIKYGST
Trigger: AGTGCTACCGTATTTTATTTTGTGGGAGTATTCTGCTGCTTTTCACTCTTCTATTTGAAGTTGCTCACTCACATGCCATTTGCCCATCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531935.1
CDS-3UTR CAA 90 bp TTGTTAAACACTGTCTGTAGTAGGGCCTTACAGCTTGGTCTAAACGGTGGTGATTTTTCTCGAAGCTTTTaGAACTCATCTACGTCTCCT +
Preference number: 5 (lower is better)
Translates to: LLNTVCSRALQLGLNGGDFSRSF*NSSTSP
Trigger: AGGAGACGTAGATGAGTTCAAAAAGCTTCGAGAAAA...ATCACCACCGTTTAGACCAAGCTGTAAGGCCCTACTACAGACAGTGTTTAACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CAA 90 bp CCTTCAACCTCTGGCTATTGTTACTTTCTGGGAATTGTGTTGGGTTCTTGTAAGATGACTTTAATCCCCTaGTCCAGCATGTTTTCTCGA +
Preference number: 5 (lower is better)
Translates to: PSTSGYCYFLGIVLGSCKMTLIP*SSMFSR
Trigger: TCGAGAAAACATGCTGGACAAGGGGATTAAAGTCAT...CTTACAAGAACCCAACACAATTCCCAGAAAGTAACAATAGCCAGAGGTTGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CAA 90 bp TTGTTAAACACTGTCTGTAGTAGGGCCTTACAGCTTGGTCTAAACGGTGGTGATGTTACTTTCTGGGAATaGTGTTGGGTTCTTGTAAGT +
Preference number: 5 (lower is better)
Translates to: LLNTVCSRALQLGLNGGDVTFWE*CWVLVS
Trigger: ACTTACAAGAACCCAACACAATTCCCAGAAAGTAAC...ATCACCACCGTTTAGACCAAGCTGTAAGGCCCTACTACAGACAGTGTTTAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CAA 90 bp CTTCAACCTCTGGCTATTGTTACTTTCTGGGAATTGTGTTGGGTTCTTGTAAGTACAACAGAGCAGAAGTaGATAATGCTCCGAGGAATC +
Preference number: 5 (lower is better)
Translates to: LQPLAIVTFWELCWVLVSTTEQK*IMLRGI
Trigger: GATTCCTCGGAGCATTATCAACTTCTGCTCTGTTGT...ACTTACAAGAACCCAACACAATTCCCAGAAAGTAACAATAGCCAGAGGTTGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533050.6
ENST00000627851.2
CDS TCA 90 bp ACGGTGCACCAGCCACATGTGGCTCCTAACTATGATACTAGACAGTaGAGATTATACAGTATTTTTATGACTGCAGGAAATTCTACTGGA +
Preference number: 5 (lower is better)
Translates to: TVHQPHVAPNYDTRQ*RLYSIFMTAGNSTG
Trigger: TCCAGTAGAATTTCCTGCAGTCATAAAAATACTGTATAATCTTCACTGTCTAGTATCATAGTTAGGAGCCACATGTGGCTGGTGCACCGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531935.1
CDS-3UTR CAA 90 bp ACTGTAGTTCTAGGACATATGTATGGTCAGGACAACAGAGCAGAAGTTGATAATAGGTCAGATTTATGCTaGACAGCCTCCAAGAAAAGG +
Preference number: 5 (lower is better)
Translates to: TVVLGHMYGQDNRAEVDNRSDLC*TASKKR
Trigger: CCTTTTCTTGGAGGCTGTCAAGCATAAATCTGACCT...ATTATCAACTTCTGCTCTGTTGTCCTGACCATACATATGTCCTAGAACTACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CAA 90 bp CCTTCAACCTCTGGCTATTGTTACTTTCTGGGAATTGTGTTGGGTTCTTGTAAGTTCAACCTCTGGCTATaGTTACTTTCTGGGAATTGT +
Preference number: 5 (lower is better)
Translates to: PSTSGYCYFLGIVLGSCKFNLWL*LLSGNC
Trigger: ACAATTCCCAGAAAGTAACAATAGCCAGAGGTTGAA...CTTACAAGAACCCAACACAATTCCCAGAAAGTAACAATAGCCAGAGGTTGAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CAA 90 bp ACTTTCTGGGAATTGTGTTGGGTTCTTGTAAGTTTACTTGTTAAACACTGTCTGCTGTCGCTTTTATTCTaGAACTTGAACAGGCGGCAG +
Preference number: 5 (lower is better)
Translates to: TFWELCWVLVSLLVKHCLLSLLF*NLNRRQ
Trigger: CTGCCGCCTGTTCAAGTTCAAGAATAAAAGCGACAG...CAGACAGTGTTTAACAAGTAAACTTACAAGAACCCAACACAATTCCCAGAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360194.8
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CAA 90 bp GTTACTTTCTGGGAATTGTGTTGGGTTCTTGTAAGTTTACTTGTTAAACACTGTCTGCTGATGTACCCCTaGTGGAGATCTCACATGTCA +
Preference number: 5 (lower is better)
Translates to: VTFWELCWVLVSLLVKHCLLMYP*WRSHMS
Trigger: TGACATGTGAGATCTCCACAAGGGGTACATCAGCAG...ACAGTGTTTAACAAGTAAACTTACAAGAACCCAACACAATTCCCAGAAAGTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CAA 90 bp ACTTTCTGGGAATTGTGTTGGGTTCTTGTAAGTTTACTTGTTAAACACTGTCTGAGGTCAGATTTATGCTaGACAGCCTCCAAGAAAAGG +
Preference number: 5 (lower is better)
Translates to: TFWELCWVLVSLLVKHCLRSDLC*TASKKR
Trigger: CCTTTTCTTGGAGGCTGTCAAGCATAAATCTGACCT...CAGACAGTGTTTAACAAGTAAACTTACAAGAACCCAACACAATTCCCAGAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CAA 90 bp CTTCAACCTCTGGCTATTGTTACTTTCTGGGAATTGTGTTGGGTTCTTGTAAGTTTTTCTCGAAGCTTTTaGAACTCATCTACGTCTCCT +
Preference number: 5 (lower is better)
Translates to: LQPLAIVTFWELCWVLVSFSRSF*NSSTSP
Trigger: AGGAGACGTAGATGAGTTCAAAAAGCTTCGAGAAAA...ACTTACAAGAACCCAACACAATTCCCAGAAAGTAACAATAGCCAGAGGTTGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CAA 90 bp CCTTCAACCTCTGGCTATTGTTACTTTCTGGGAATTGTGTTGGGTTCTTGTAAGTTTCTGGGAATTGTGTaGGGTTCTTGTAAGTTTACT +
Preference number: 5 (lower is better)
Translates to: PSTSGYCYFLGIVLGSCKFLGIV*GSCKFT
Trigger: AGTAAACTTACAAGAACCCAACACAATTCCCAGAAA...CTTACAAGAACCCAACACAATTCCCAGAAAGTAACAATAGCCAGAGGTTGAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CAA 90 bp CTTCAACCTCTGGCTATTGTTACTTTCTGGGAATTGTGTTGGGTTCTTGTAAGTTTTCTGGGAATTGTGTaGGGTTCTTGTAAGTTTACT +
Preference number: 5 (lower is better)
Translates to: LQPLAIVTFWELCWVLVSFLGIV*GSCKFT
Trigger: AGTAAACTTACAAGAACCCAACACAATTCCCAGAAA...ACTTACAAGAACCCAACACAATTCCCAGAAAGTAACAATAGCCAGAGGTTGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS-3UTR CAA 90 bp ACTTTCTGGGAATTGTGTTGGGTTCTTGTAAGTTTACTTGTTAAACACTGTCTGGTTACTTTCTGGGAATaGTGTTGGGTTCTTGTAAGT +
Preference number: 5 (lower is better)
Translates to: TFWELCWVLVSLLVKHCLVTFWE*CWVLVS
Trigger: ACTTACAAGAACCCAACACAATTCCCAGAAAGTAAC...CAGACAGTGTTTAACAAGTAAACTTACAAGAACCCAACACAATTCCCAGAAAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS GCA 72 bp GAAGCCATCCAGTTTCGAGTCTCCTCCAAACGCCACTaGTCCAGCTGCAGCTACCGGCCGGCGCAGCCGCAC +
Preference number: 6 (lower is better)
Translates to: EAIQFRVSSKRH*SSCSYRPAQPH
Trigger: GTGCGGCTGCGCCGGCCGGTAGCTGCAGCTGGAGCAGTGGCGTTTGGAGGAGACTCGAAACTGGATGGCTTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360194.8
ENST00000529731.5
CDS GCA 72 bp CTGAGAAGGTATATCCGAGTCTCCTCCAAACGCCACTaGTCCAGCTGCAGCTACCGGCCGGCGCAGCCGCAC +
Preference number: 6 (lower is better)
Translates to: LRRYIRVSSKRH*SSCSYRPAQPH
Trigger: GTGCGGCTGCGCCGGCCGGTAGCTGCAGCTGGAGCAGTGGCGTTTGGAGGAGACTCGGATATACCTTCTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525728.5
ENST00000528985.5
ENST00000627851.2
CDS CCA 72 bp CACTCGAGGACAGGAGAGAGTTTCTGGATAAGGTCATaGGCAACATGGACCAGGTTCTTGTCTTCATGGAGA +
Preference number: 6 (lower is better)
Translates to: HSRTGESFWIRS*ATWTRFLSSWR
Trigger: TCTCCATGAAGACAAGAACCTGGTCCATGTTGCCCATGACCTTATCCAGAAACTCTCTCCTGTCCTCGAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525338.1
ENST00000529731.5
ENST00000627851.2
CDS CCA 72 bp GTGGCACATACTAGGGTACTCACAGGAGAGAGTTTCTaGATAAGGTCATGGGCAACATGGACCAGGTTCTTG +
Preference number: 6 (lower is better)
Translates to: VAHTRVLTGESF*IRSWATWTRFL
Trigger: CAAGAACCTGGTCCATGTTGCCCATGACCTTATCCAGAAACTCTCTCCTGTGAGTACCCTAGTATGTGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527247.5
CDS TCA 72 bp GCTTCCTGGGCTTTTTGGTGGGAGGTTCGCCATCGTTaGAGAATCCAAAAATCTCGTCTATATCAGAGGCCT +
Preference number: 6 (lower is better)
Translates to: ASWAFWWEVRHR*RIQKSRLYQRP
Trigger: AGGCCTCTGATATAGACGAGATTTTTGGATTCTTCAACGATGGCGAACCTCCCACCAAAAAGCCCAGGAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000360194.8
ENST00000525338.1
ENST00000527247.5
ENST00000528985.5
ENST00000529731.5
ENST00000530043.5
ENST00000533050.6
ENST00000627851.2
CDS TCA 72 bp TCTTTCTTTGTCACTGCTTTCCTCCTGTGCAGCTTCTaGGAAGGTATATCCGAGTCTCCTCCAAACGCCACT +
Preference number: 6 (lower is better)
Translates to: SFFVTAFLLCSF*EGISESPPNAT
Trigger: AGTGGCGTTTGGAGGAGACTCGGATATACCTTCTCAGAAGCTGCACAGGAGGAAAGCAGTGACAAAGAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000525728.5
ENST00000528985.5
ENST00000530043.5
ENST00000533050.6
ENST00000627851.2
CDS GCA 72 bp TTCCATTCCTCAGTCACACTGGCCACATTTCAACGGTaGACCAGCCACATGTGGCTCCTAACTATGATACTA +
Preference number: 6 (lower is better)
Translates to: FHSSVTLATFQR*TSHMWLLTMIL
Trigger: TAGTATCATAGTTAGGAGCCACATGTGGCTGGTGCACCGTTGAAATGTGGCCAGTGTGACTGAGGAATGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531935.1
CDS CCA 72 bp AGGGTACTCACAGGAGAGAGTTTCTGGATAAGGTCATaGGCAACATGGACCAGGTTCTTGTCTTCATGGAGA +
Preference number: 6 (lower is better)
Translates to: RVLTGESFWIRS*ATWTRFLSSWR
Trigger: TCTCCATGAAGACAAGAACCTGGTCCATGTTGCCCATGACCTTATCCAGAAACTCTCTCCTGTGAGTACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527247.5
CDS CAA 90 bp TCTCCTCTCCGAACCAGCATGAAATGTTCTAGGTCAGATTTATGCTaGACAGCCTCCAAGAAAAGGGCCTGGAAAGTGGTGTCATCCACA +
Preference number: 6 (lower is better)
Translates to: SPLRTSMKCSRSDLC*TASKKRAWKVVSST
Trigger: TGTGGATGACACCACTTTCCAGGCCCTTTTCTTGGAGGCTGTCAAGCATAAATCTGACCTAGAACATTTCATGCTGGTTCGGAGAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360194.8
ENST00000525338.1
ENST00000528985.5
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS CCA 72 bp TTGAAGAATCCAAAAATCTCGTCTATATCAGAGGCCTaGCTCCCTGTAGAAGCCATCCAGTTTCGAGTCTCC +
Preference number: 6 (lower is better)
Translates to: LKNPKISSISEA*LPVEAIQFRVS
Trigger: GGAGACTCGAAACTGGATGGCTTCTACAGGGAGCCAGGCCTCTGATATAGACGAGATTTTTGGATTCTTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360194.8
ENST00000529731.5
CDS CCA 72 bp TTACTGGTACGAGGAGAGAGTTTCTGGATAAGGTCATaGGCAACATGGACCAGGTTCTTGTCTTCATGGAGA +
Preference number: 6 (lower is better)
Translates to: LLVRGESFWIRS*ATWTRFLSSWR
Trigger: TCTCCATGAAGACAAGAACCTGGTCCATGTTGCCCATGACCTTATCCAGAAACTCTCTCCTCGTACCAGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360194.8
ENST00000525728.5
ENST00000528985.5
ENST00000530043.5
ENST00000533050.6
CDS CAA 72 bp CGAACCAGCATGAAATGTTCTAGGTCAGATTTATGCTaGACAGCCTCCAAGAAAAGGGCCTGGAAAGTGGTG +
Preference number: 6 (lower is better)
Translates to: RTSMKCSRSDLC*TASKKRAWKVV
Trigger: CACCACTTTCCAGGCCCTTTTCTTGGAGGCTGTCAAGCATAAATCTGACCTAGAACATTTCATGCTGGTTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360194.8
ENST00000525338.1
ENST00000528985.5
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS CCA 72 bp TTGAAGAATCCAAAAATCTCGTCTATATCAGAGGCCTaGCTCCCTGTAGAAGCCATCCAGTTTCGTGCAAAG +
Preference number: 6 (lower is better)
Translates to: LKNPKISSISEA*LPVEAIQFRAK
Trigger: CTTTGCACGAAACTGGATGGCTTCTACAGGGAGCCAGGCCTCTGATATAGACGAGATTTTTGGATTCTTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000525338.1
ENST00000527247.5
ENST00000533050.6
ENST00000627851.2
CDS CCA 72 bp TTGAAGAATCCAAAAATCTCGTCTATATCAGAGGCCTaGCTCCCTGTAGAAGCCATCCAGTTTCCCATAGTC +
Preference number: 6 (lower is better)
Translates to: LKNPKISSISEA*LPVEAIQFPIV
Trigger: GACTATGGGAAACTGGATGGCTTCTACAGGGAGCCAGGCCTCTGATATAGACGAGATTTTTGGATTCTTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528985.5
CDS CCA 72 bp ACACTGGCCACATTTCAACGGTGCACCAGCCACATGTaGCTCCTAACTATGATACTAGACAGTGAAGATTAT +
Preference number: 6 (lower is better)
Translates to: TLATFQRCTSHM*LLTMILDSEDY
Trigger: ATAATCTTCACTGTCTAGTATCATAGTTAGGAGCCACATGTGGCTGGTGCACCGTTGAAATGTGGCCAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531935.1
CDS TCA 72 bp ATGTACCCCTTGTGGAGATCTCACATGTCAGTCGCTTaGAATATTCTGGAAGATCGGCATAGTCATCTCCAT +
Preference number: 6 (lower is better)
Translates to: MYPLWRSHMSVA*NILEDRHSHLH
Trigger: ATGGAGATGACTATGCCGATCTTCCAGAATATTTCAAGCGACTGACATGTGAGATCTCCACAAGGGGTACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360194.8
ENST00000528985.5
ENST00000529731.5
ENST00000533050.6
ENST00000627851.2
CDS TCA 72 bp TTCAATCTCACCAGGGATGGGCAAATGGCATGTGAGTaGGCAACTTCAAATAGAAGAGTGAAAAGCAGCAGA +
Preference number: 6 (lower is better)
Translates to: FNLTRDGQMACE*ATSNRRVKSSR
Trigger: TCTGCTGCTTTTCACTCTTCTATTTGAAGTTGCTCACTCACATGCCATTTGCCCATCCCTGGTGAGATTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531935.1
CDS GCA 72 bp TTCCGTGCAAAGAATGACAACTTCTTTCTTTGTCACTaGTTTCCTCCTGTGCAGCTTCTGAGAAGGTATATC +
Preference number: 6 (lower is better)
Translates to: FRAKNDNFFLCH*FPPVQLLRRYI
Trigger: GATATACCTTCTCAGAAGCTGCACAGGAGGAAAGCAGTGACAAAGAAAGAAGTTGTCATTCTTTGCACGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525728.5
CDS GCA 72 bp AAGCGTGCAAAGAATGACAACTTCTTTCTTTGTCACTaGTTTCCTCCTGTGCAGCTTCTGAGAAGGTATATC +
Preference number: 6 (lower is better)
Translates to: KRAKNDNFFLCH*FPPVQLLRRYI
Trigger: GATATACCTTCTCAGAAGCTGCACAGGAGGAAAGCAGTGACAAAGAAAGAAGTTGTCATTCTTTGCACGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528985.5
CDS GCA 72 bp TACCGTGCAAAGAATGACAACTTCTTTCTTTGTCACTaGTTTCCTCCTGTGCAGCTTCTGAGAAGGTATATC +
Preference number: 6 (lower is better)
Translates to: YRAKNDNFFLCH*FPPVQLLRRYI
Trigger: GATATACCTTCTCAGAAGCTGCACAGGAGGAAAGCAGTGACAAAGAAAGAAGTTGTCATTCTTTGCACGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530043.5
CDS TCA 72 bp TCATCAGTAAGGTCAAGGGATTCAAGCTGTTTCCCCTaGTCTGCTGCATACAGTTCCAAGAGATTATCAAAA +
Preference number: 6 (lower is better)
Translates to: SSVRSRDSSCFP*SAAYSSKRLSK
Trigger: TTTTGATAATCTCTTGGAACTGTATGCAGCAGATCAGGGGAAACAGCTTGAATCCCTTGACCTTACTGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000525728.5
ENST00000528985.5
ENST00000533050.6
CDS GCA 72 bp TTTCGTGCAAAGAATGACAACTTCTTTCTTTGTCACTaGTTTCCTCCTGTGCAGCTTCTGAGAAGGTATATC +
Preference number: 6 (lower is better)
Translates to: FRAKNDNFFLCH*FPPVQLLRRYI
Trigger: GATATACCTTCTCAGAAGCTGCACAGGAGGAAAGCAGTGACAAAGAAAGAAGTTGTCATTCTTTGCACGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000525338.1
ENST00000527247.5
ENST00000533050.6
ENST00000627851.2
CDS CAA 72 bp AAGACAACTGTCCTGAGTAGGGTCCATAAACAGACATaGCGCAGAAGAGTCAAATGTTATGGAAACCTACAA +
Preference number: 6 (lower is better)
Translates to: KTTVLSRVHKQT*RRRVKCYGNLQ
Trigger: TTGTAGGTTTCCATAACATTTGACTCTTCTGCGCAATGTCTGTTTATGGACCCTACTCAGGACAGTTGTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527247.5
CDS CAA 90 bp AATGGGGTTAAGACAACTGTCCTGAGTAGGGTCCATAAACAGACATaGCGCAGAAGAGTCAAATGTTATGGAAACCTACAAGCTGTAAAT +
Preference number: 6 (lower is better)
Translates to: NGVKTTVLSRVHKQT*RRRVKCYGNLQAVN
Trigger: ATTTACAGCTTGTAGGTTTCCATAACATTTGACTCTTCTGCGCAATGTCTGTTTATGGACCCTACTCAGGACAGTTGTCTTAACCCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527247.5
CDS GCA 72 bp AAGGTCAAGGGATTCAAGCTGTTTCCCCTGATCTGCTaGATACAGTTCCAAGAGATTATCAAAATTTGTAGT +
Preference number: 6 (lower is better)
Translates to: KVKGFKLFPLIC*IQFQEIIKICS
Trigger: ACTACAAATTTTGATAATCTCTTGGAACTGTATGCAGCAGATCAGGGGAAACAGCTTGAATCCCTTGACCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000525728.5
ENST00000528985.5
ENST00000533050.6
CDS GCA 72 bp AGTAAGGTCAAGGGATTCAAGCTGTTTCCCCTGATCTaGTGCATACAGTTCCAAGAGATTATCAAAATTTGT +
Preference number: 6 (lower is better)
Translates to: SKVKGFKLFPLI*CIQFQEIIKIC
Trigger: ACAAATTTTGATAATCTCTTGGAACTGTATGCAGCAGATCAGGGGAAACAGCTTGAATCCCTTGACCTTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360194.8
ENST00000525728.5
ENST00000528985.5
ENST00000533050.6
CDS TCA 72 bp CAGCCACATGTGGCTCCTAACTATGATACTAGACAGTaGAGATTATACAGTATTTTTATGACTGCAGGAAAT +
Preference number: 6 (lower is better)
Translates to: QPHVAPNYDTRQ*RLYSIFMTAGN
Trigger: ATTTCCTGCAGTCATAAAAATACTGTATAATCTTCACTGTCTAGTATCATAGTTAGGAGCCACATGTGGCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531935.1
CDS CAA 72 bp GACTCCAAGTCATCAAATACTTCATATAAACAGTCCTaGAAAAATGTGGATCGAACATTACTGGTACGAGGA +
Preference number: 6 (lower is better)
Translates to: DSKSSNTSYKQS*KNVDRTLLVRG
Trigger: TCCTCGTACCAGTAATGTTCGATCCACATTTTTCAAGGACTGTTTATATGAAGTATTTGATGACTTGGAGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360194.8
ENST00000525728.5
ENST00000528985.5
ENST00000530043.5
ENST00000533050.6