RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM118A (Homo sapiens)

Ensembl gene IDs: ENSG00000100376

Ensembl transcript IDs: ENST00000216214.7, ENST00000405673.5, ENST00000424557.1, ENST00000427777.1, ENST00000441876.7, ENST00000452238.5, ENST00000459849.1, ENST00000462361.1, ENST00000476478.1, ENST00000476754.1, ENST00000477714.1, ENST00000479180.1, ENST00000481447.1, ENST00000483102.5, ENST00000487732.5, ENST00000491671.1

Found 440 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAACCCTCCACTGTAGGGCCGCTCATGCACCGCCACAGAAGCCTCTaGCGGGTCACAGTCAGAGAAGCTCCCCGGGCACCGGCAGCACAC +
Preference number: 1 (lower is better)
Translates to: EPSTVGPLMHRHRSL*RVTVREAPRAPAAH
Trigger: GTGTGCTGCCGGTGCCCGGGGAGCTTCTCTGACTGTGACCCGGCAGAGGCTTCTGTGGCGGTGCATGAGCGGCCCTACAGTGGAGGGTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR GCA 90 bp TCTCTCGAACTTGAGCTATCCCGGTTGTCAGTCCCACAGTGGCCGTaGACAATGTTGGCCTGGACTGAAAAGGGCCTCTGGCTCCTCCGA +
Preference number: 1 (lower is better)
Translates to: SLELELSRLSVPQWP*TMLAWTEKGLWLLR
Trigger: TCGGAGGAGCCAGAGGCCCTTTTCAGTCCAGGCCAACATTGTGCACGGCCACTGTGGGACTGACAACCGGGATAGCTCAAGTTCGAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR CCA 90 bp ACCTGGTCTCTCGAACTTGAGCTATCCCGGTTGTCAGTCCCACAGTaGCCGTGCACAATGTTGGCCTGGACTGAAAAGGGCCTCTGGCTC +
Preference number: 1 (lower is better)
Translates to: TWSLELELSRLSVPQ*PCTMLAWTEKGLWL
Trigger: GAGCCAGAGGCCCTTTTCAGTCCAGGCCAACATTGTGCACGGCCACTGTGGGACTGACAACCGGGATAGCTCAAGTTCGAGAGACCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR CCA 90 bp CTATCCCGGTTGTCAGTCCCACAGTGGCCGTGCACAATGTTGGCCTaGACTGAAAAGGGCCTCTGGCTCCTCCGATTTCAGTTCTTAGCA +
Preference number: 1 (lower is better)
Translates to: LSRLSVPQWPCTMLA*TEKGLWLLRFQFLA
Trigger: TGCTAAGAACTGAAATCGGAGGAGCCAGAGGCCCTTTTCAGTCCAGGCCAACATTGTGCACGGCCACTGTGGGACTGACAACCGGGATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR CCA 90 bp TTGAGCTATCCCGGTTGTCAGTCCCACAGTGGCCGTGCACAATGTTaGCCTGGACTGAAAAGGGCCTCTGGCTCCTCCGATTTCAGTTCT +
Preference number: 1 (lower is better)
Translates to: LSYPGCQSHSGRAQC*PGLKRASGSSDFSS
Trigger: AGAACTGAAATCGGAGGAGCCAGAGGCCCTTTTCAGTCCAGGCCAACATTGTGCACGGCCACTGTGGGACTGACAACCGGGATAGCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR TCA 90 bp CCGGTTGTCAGTCCCACAGTGGCCGTGCACAATGTTGGCCTGGACTaGAAAGGGCCTCTGGCTCCTCCGATTTCAGTTCTTAGCAATATC +
Preference number: 1 (lower is better)
Translates to: PVVSPTVAVHNVGLD*KGPLAPPISVLSNI
Trigger: GATATTGCTAAGAACTGAAATCGGAGGAGCCAGAGGCCCTTTTCAGTCCAGGCCAACATTGTGCACGGCCACTGTGGGACTGACAACCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR TCA 90 bp CCCAGCCTTGAGGGCCACATGCCCATGTGGCTCTCTTGGTGTATGTaGCGGTTTCGCAATCAGAGATCCACGTGGAGTTCTCCATACATT +
Preference number: 1 (lower is better)
Translates to: PSLEGHMPMWLSWCM*RFRNQRSTWSSPYI
Trigger: AATGTATGGAGAACTCCACGTGGATCTCTGATTGCGAAACCGTCACATACACCAAGAGAGCCACATGGGCATGTGGCCCTCAAGGCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR CCA 90 bp CCACAGTGGCCGTGCACAATGTTGGCCTGGACTGAAAAGGGCCTCTaGCTCCTCCGATTTCAGTTCTTAGCAATATCAGACCTGTGTTTC +
Preference number: 1 (lower is better)
Translates to: PQWPCTMLAWTEKGL*LLRFQFLAISDLCF
Trigger: GAAACACAGGTCTGATATTGCTAAGAACTGAAATCGGAGGAGCCAGAGGCCCTTTTCAGTCCAGGCCAACATTGTGCACGGCCACTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR GCA 90 bp GTGAACCTGAGAAGGTTTAAAGTGTTGCAGGCCCTTTTCAAGTTTTaGCTCCCTCACTCTCTGCAAACTCCCTTAATGTGGGCCATGGAA +
Preference number: 1 (lower is better)
Translates to: VNLRRFKVLQALFKF*LPHSLQTPLMWAME
Trigger: TTCCATGGCCCACATTAAGGGAGTTTGCAGAGAGTGAGGGAGGCAAAACTTGAAAAGGGCCTGCAACACTTTAAACCTTCTCAGGTTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR CCA 90 bp GCAATCAGAGATCCACGTGGAGTTCTCCATACATTCCTCTTCGTTTaGGCACTGTGGTTACAGAAGGCTAGTTTTCAAGTTGCAGGTTTT +
Preference number: 1 (lower is better)
Translates to: AIRDPRGVLHTFLFV*ALWLQKASFQVAGF
Trigger: AAAACCTGCAACTTGAAAACTAGCCTTCTGTAACCACAGTGCCCAAACGAAGAGGAATGTATGGAGAACTCCACGTGGATCTCTGATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR CCA 90 bp GATCCACGTGGAGTTCTCCATACATTCCTCTTCGTTTGGGCACTGTaGTTACAGAAGGCTAGTTTTCAAGTTGCAGGTTTTACTGTAAAG +
Preference number: 1 (lower is better)
Translates to: DPRGVLHTFLFVWAL*LQKASFQVAGFTVK
Trigger: CTTTACAGTAAAACCTGCAACTTGAAAACTAGCCTTCTGTAACCACAGTGCCCAAACGAAGAGGAATGTATGGAGAACTCCACGTGGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR CCA 90 bp CTGTTTCCTGTTCTTAACTTTATCTGTACCTATGGGAGTCATCAATaGGGAGTGTCACAGGGCTTGGCAAGAAATGTCACATTGAAGATA +
Preference number: 1 (lower is better)
Translates to: LFPVLNFICTYGSHQ*GVSQGLARNVTLKI
Trigger: TATCTTCAATGTGACATTTCTTGCCAAGCCCTGTGACACTCCCCATTGATGACTCCCATAGGTACAGATAAAGTTAAGAACAGGAAACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR-3UTR TCA 90 bp CCACAGAAGCCTCTGCCGGGTCACAGTCAGAGAAGCTCCCCGGGCACCGGCAGCCCTCTCACCCAGCCTTaGGGGCCACATGCCCATGTG +
Preference number: 2 (lower is better)
Translates to: PQKPLPGHSQRSSPGTGSPLTQP*GPHAHV
Trigger: CACATGGGCATGTGGCCCTCAAGGCTGGGTGAGAGG...GCTGCCGGTGCCCGGGGAGCTTCTCTGACTGTGACCCGGCAGAGGCTTCTGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR-3UTR CCA 90 bp CCACAGAAGCCTCTGCCGGGTCACAGTCAGAGAAGCTCCCCGGGCACCGGCAGCTTGTCAGTCCCACAGTaGCCGTGCACAATGTTGGCC +
Preference number: 2 (lower is better)
Translates to: PQKPLPGHSQRSSPGTGSLSVPQ*PCTMLA
Trigger: GGCCAACATTGTGCACGGCCACTGTGGGACTGACAA...GCTGCCGGTGCCCGGGGAGCTTCTCTGACTGTGACCCGGCAGAGGCTTCTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR-3UTR GCA 90 bp ACTGTAGGGCCGCTCATGCACCGCCACAGAAGCCTCTGCCGGGTCACAGTCAGAGCCTTGAGGGCCACATaGCCATGTGGCTCTCTTGGT +
Preference number: 2 (lower is better)
Translates to: TVGPLMHRHRSLCRVTVRALRAT*PCGSLG
Trigger: ACCAAGAGAGCCACATGGGCATGTGGCCCTCAAGGC...TCTGACTGTGACCCGGCAGAGGCTTCTGTGGCGGTGCATGAGCGGCCCTACAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR-3UTR GCA 90 bp ACTGTAGGGCCGCTCATGCACCGCCACAGAAGCCTCTGCCGGGTCACAGTCAGATCCGCGTCACCCTCCTaGATAGTTCAACACACAGGG +
Preference number: 2 (lower is better)
Translates to: TVGPLMHRHRSLCRVTVRSASPS*IVQHTG
Trigger: CCCTGTGTGTTGAACTATGCAGGAGGGTGACGCGGA...TCTGACTGTGACCCGGCAGAGGCTTCTGTGGCGGTGCATGAGCGGCCCTACAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR-3UTR GCA 90 bp CCACAGAAGCCTCTGCCGGGTCACAGTCAGAGAAGCTCCCCGGGCACCGGCAGCGCCCTTTTCAAGTTTTaGCTCCCTCACTCTCTGCAA +
Preference number: 2 (lower is better)
Translates to: PQKPLPGHSQRSSPGTGSALFKF*LPHSLQ
Trigger: TTGCAGAGAGTGAGGGAGGCAAAACTTGAAAAGGGC...GCTGCCGGTGCCCGGGGAGCTTCTCTGACTGTGACCCGGCAGAGGCTTCTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR CAA 90 bp CCCTCCTGCATAGTTCAACACACAGGGGAGCCCTCTCACCCAGCCTaGAGGGCCACATGCCCATGTGGCTCTCTTGGTGTATGTGACGGT +
Preference number: 2 (lower is better)
Translates to: PSCIVQHTGEPSHPA*RATCPCGSLGVCDG
Trigger: ACCGTCACATACACCAAGAGAGCCACATGGGCATGTGGCCCTCAAGGCTGGGTGAGAGGGCTCCCCTGTGTGTTGAACTATGCAGGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR-3UTR TCA 90 bp ACTGTAGGGCCGCTCATGCACCGCCACAGAAGCCTCTGCCGGGTCACAGTCAGAACGGATTCTGGTCCCTaGGGTAGCTATCCATCAGTC +
Preference number: 2 (lower is better)
Translates to: TVGPLMHRHRSLCRVTVRTDSGP*GSYPSV
Trigger: GACTGATGGATAGCTACCTCAGGGACCAGAATCCGT...TCTGACTGTGACCCGGCAGAGGCTTCTGTGGCGGTGCATGAGCGGCCCTACAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR-3UTR GCA 90 bp CTATTCTCCTGCCTCAGCCTCCCAAGTTGCCAGTGTGCCACTTTCCATTATTACCCCAGTAGCGGGGACTaGAGGCAGGCGCCACCATGC +
Preference number: 2 (lower is better)
Translates to: LFSCLSLPSCQCATFHYYPSSGD*RQAPPC
Trigger: GCATGGTGGCGCCTGCCTGCAGTCCCCGCTACTGGG...GTAATAATGGAAAGTGGCACACTGGCAACTTGGGAGGCTGAGGCAGGAGAATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405673.5
3UTR-3UTR TCA 90 bp CTGCCTTCTGCCACTATTGGAAACTTCCTGAGGCCTCCCCGGAAGCAGATGCTGCAGGCTGGAGTACAGTaGTCTCAGCTCACTGCAACC +
Preference number: 2 (lower is better)
Translates to: LPSATIGNFLRPPRKQMLQAGVQ*SQLTAT
Trigger: GGTTGCAGTGAGCTGAGATCACTGTACTCCAGCCTG...CAGCATCTGCTTCCGGGGAGGCCTCAGGAAGTTTCCAATAGTGGCAGAAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405673.5
3UTR-3UTR CCA 90 bp CACAGGGGAGCCCTCTCACCCAGCCTTGAGGGCCACATGCCCATGTGGCTCTCTTTCGTTTGGGCACTGTaGTTACAGAAGGCTAGTTTT +
Preference number: 2 (lower is better)
Translates to: HRGALSPSLEGHMPMWLSFVWAL*LQKASF
Trigger: AAAACTAGCCTTCTGTAACCACAGTGCCCAAACGAA...AGAGAGCCACATGGGCATGTGGCCCTCAAGGCTGGGTGAGAGGGCTCCCCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR-3UTR TCA 90 bp TTATCTGTACCTATGGGAGTCATCAATGGGGAGTGTCACAGGGCTTGGCAAGAAGGCAGGAGAATCACTTaGGCCCAGGCGGTGGTGGCT +
Preference number: 2 (lower is better)
Translates to: LSVPMGVINGECHRAWQEGRRIT*AQAVVA
Trigger: AGCCACCACCGCCTGGGCTCAAGTGATTCTCCTGCC...TTCTTGCCAAGCCCTGTGACACTCCCCATTGATGACTCCCATAGGTACAGATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR-3UTR CCA 90 bp ACTGTAGGGCCGCTCATGCACCGCCACAGAAGCCTCTGCCGGGTCACAGTCAGAAATCAGAGATCCACGTaGAGTTCTCCATACATTCCT +
Preference number: 2 (lower is better)
Translates to: TVGPLMHRHRSLCRVTVRNQRST*SSPYIP
Trigger: AGGAATGTATGGAGAACTCCACGTGGATCTCTGATT...TCTGACTGTGACCCGGCAGAGGCTTCTGTGGCGGTGCATGAGCGGCCCTACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR-3UTR GCA 90 bp ACACCATGTGTTGGCAAGATACAGGAAATGGATACTCCCACACTCAGCCACTACGCCATGTGGCATGCCTaGTCCCACTCTGCCTTCTGC +
Preference number: 2 (lower is better)
Translates to: TPCVGKIQEMDTPTLSHYAMWHA*SHSAFC
Trigger: GCAGAAGGCAGAGTGGGAGCAGGCATGCCACATGGC...GTAGTGGCTGAGTGTGGGAGTATCCATTTCCTGTATCTTGCCAACACATGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405673.5
3UTR-3UTR GCA 90 bp TTATCTGTACCTATGGGAGTCATCAATGGGGAGTGTCACAGGGCTTGGCAAGAAGCCTTGAGGGCCACATaGCCATGTGGCTCTCTTGGT +
Preference number: 2 (lower is better)
Translates to: LSVPMGVINGECHRAWQEALRAT*PCGSLG
Trigger: ACCAAGAGAGCCACATGGGCATGTGGCCCTCAAGGC...TTCTTGCCAAGCCCTGTGACACTCCCCATTGATGACTCCCATAGGTACAGATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR-3UTR CCA 90 bp TTATCTGTACCTATGGGAGTCATCAATGGGGAGTGTCACAGGGCTTGGCAAGAAGGCCGTGCACAATGTTaGCCTGGACTGAAAAGGGCC +
Preference number: 2 (lower is better)
Translates to: LSVPMGVINGECHRAWQEGRAQC*PGLKRA
Trigger: GGCCCTTTTCAGTCCAGGCCAACATTGTGCACGGCC...TTCTTGCCAAGCCCTGTGACACTCCCCATTGATGACTCCCATAGGTACAGATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR CAA 90 bp CACATTGAAGATAAGTGGCCTCAAACTGAAACCAAGCAGGGCTGTTaGTTTCCAAAGAGAACCCTCCACTGTAGGGCCGCTCATGCACCG +
Preference number: 2 (lower is better)
Translates to: HIEDKWPQTETKQGC*FPKRTLHCRAAHAP
Trigger: CGGTGCATGAGCGGCCCTACAGTGGAGGGTTCTCTTTGGAAACAAACAGCCCTGCTTGGTTTCAGTTTGAGGCCACTTATCTTCAATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR-3UTR TCA 90 bp TCTTTGGCAGCTACTGTTGCTTGGACAGTCTTTACTCTTCCCCTTTTATTACGACCTCTCACCCAGCCTTaGGGGCCACATGCCCATGTG +
Preference number: 2 (lower is better)
Translates to: SLAATVAWTVFTLPLLLRPLTQP*GPHAHV
Trigger: CACATGGGCATGTGGCCCTCAAGGCTGGGTGAGAGG...TCGTAATAAAAGGGGAAGAGTAAAGACTGTCCAAGCAACAGTAGCTGCCAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR-3UTR GCA 90 bp GGTCTCTCGAACTTGAGCTATCCCGGTTGTCAGTCCCACAGTGGCCGTGCACAAAAAATGTGTTTATTTTaGTGGGCGCAGTGGCTCATG +
Preference number: 2 (lower is better)
Translates to: GLSNLSYPGCQSHSGRAQKMCLF*WAQWLM
Trigger: CATGAGCCACTGCGCCCAGCAAAATAAACACATTTT...TTGTGCACGGCCACTGTGGGACTGACAACCGGGATAGCTCAAGTTCGAGAGACC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR-3UTR CCA 90 bp GGTCTCTCGAACTTGAGCTATCCCGGTTGTCAGTCCCACAGTGGCCGTGCACAATTCGTTTGGGCACTGTaGTTACAGAAGGCTAGTTTT +
Preference number: 2 (lower is better)
Translates to: GLSNLSYPGCQSHSGRAQFVWAL*LQKASF
Trigger: AAAACTAGCCTTCTGTAACCACAGTGCCCAAACGAA...TTGTGCACGGCCACTGTGGGACTGACAACCGGGATAGCTCAAGTTCGAGAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR-3UTR CCA 90 bp CTGCCTTCTGCCACTATTGGAAACTTCCTGAGGCCTCCCCGGAAGCAGATGCTGCCAGGCTGGAATAAGTaGCATGATCATAGCTCATTT +
Preference number: 2 (lower is better)
Translates to: LPSATIGNFLRPPRKQMLPGWNK*HDHSSF
Trigger: AAATGAGCTATGATCATGCCACTTATTCCAGCCTGG...CAGCATCTGCTTCCGGGGAGGCCTCAGGAAGTTTCCAATAGTGGCAGAAGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405673.5
3UTR CAA 90 bp CTTATAATGTTTGAAACCTGGTCTCTCGAACTTGAGCTATCCCGGTaGTCAGTCCCACAGTGGCCGTGCACAATGTTGGCCTGGACTGAA +
Preference number: 2 (lower is better)
Translates to: LIMFETWSLELELSR*SVPQWPCTMLAWTE
Trigger: TTCAGTCCAGGCCAACATTGTGCACGGCCACTGTGGGACTGACAACCGGGATAGCTCAAGTTCGAGAGACCAGGTTTCAAACATTATAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR-3UTR GCA 90 bp TTAACTTTATCTGTACCTATGGGAGTCATCAATGGGGAGTGTCACAGGGCTTGGTCCGCGTCACCCTCCTaGATAGTTCAACACACAGGG +
Preference number: 2 (lower is better)
Translates to: LTLSVPMGVINGECHRAWSASPS*IVQHTG
Trigger: CCCTGTGTGTTGAACTATGCAGGAGGGTGACGCGGA...CCAAGCCCTGTGACACTCCCCATTGATGACTCCCATAGGTACAGATAAAGTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR-3UTR CCA 90 bp TTATCTGTACCTATGGGAGTCATCAATGGGGAGTGTCACAGGGCTTGGCAAGAATGCACAATGTTGGCCTaGACTGAAAAGGGCCTCTGG +
Preference number: 2 (lower is better)
Translates to: LSVPMGVINGECHRAWQECTMLA*TEKGLW
Trigger: CCAGAGGCCCTTTTCAGTCCAGGCCAACATTGTGCA...TTCTTGCCAAGCCCTGTGACACTCCCCATTGATGACTCCCATAGGTACAGATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR-3UTR CCA 90 bp TTAACTTTATCTGTACCTATGGGAGTCATCAATGGGGAGTGTCACAGGGCTTGGTTGTCAGTCCCACAGTaGCCGTGCACAATGTTGGCC +
Preference number: 2 (lower is better)
Translates to: LTLSVPMGVINGECHRAWLSVPQ*PCTMLA
Trigger: GGCCAACATTGTGCACGGCCACTGTGGGACTGACAA...CCAAGCCCTGTGACACTCCCCATTGATGACTCCCATAGGTACAGATAAAGTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR CAA 90 bp CAGCACAGCCGTTTCATGTGGGTGAACCTGAGAAGGTTTAAAGTGTaGCAGGCCCTTTTCAAGTTTTGCCTCCCTCACTCTCTGCAAACT +
Preference number: 2 (lower is better)
Translates to: QHSRFMWVNLRRFKV*QALFKFCLPHSLQT
Trigger: AGTTTGCAGAGAGTGAGGGAGGCAAAACTTGAAAAGGGCCTGCAACACTTTAAACCTTCTCAGGTTCACCCACATGAAACGGCTGTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR-3UTR GCA 90 bp ACAGAAAGACTGGATATTACCCCAGAGAATAAAGACTTGCAAAGCCTGGAACTTGTCCCACAGTGGCCGTaGACAATGTTGGCCTGGACT +
Preference number: 2 (lower is better)
Translates to: TERLDITPENKDLQSLELVPQWP*TMLAWT
Trigger: AGTCCAGGCCAACATTGTGCACGGCCACTGTGGGAC...AAGTTCCAGGCTTTGCAAGTCTTTATTCTCTGGGGTAATATCCAGTCTTTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR-3UTR GCA 90 bp ACTATTGGAAACTTCCTGAGGCCTCCCCGGAAGCAGATGCTGCTATGCTTCCTACCCAAGTTGCCAGTGTaGCACTTTCCATTATTACTT +
Preference number: 2 (lower is better)
Translates to: TIGNFLRPPRKQMLLCFLPKLPV*HFPLLL
Trigger: AAGTAATAATGGAAAGTGGCACACTGGCAACTTGGG...TAGGAAGCATAGCAGCATCTGCTTCCGGGGAGGCCTCAGGAAGTTTCCAATAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405673.5
3UTR-3UTR GCA 90 bp TTAATAACACCATGTGTTGGCAAGATACAGGAAATGGATACTCCCACACTCAGCTGTTGCCATGTGGCATaGCTGCTCCCACTCTGCCTT +
Preference number: 2 (lower is better)
Translates to: LITPCVGKIQEMDTPTLSCCHVA*LLPLCL
Trigger: AAGGCAGAGTGGGAGCAGGCATGCCACATGGCAACA...GCTGAGTGTGGGAGTATCCATTTCCTGTATCTTGCCAACACATGGTGTTATTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405673.5
3UTR-3UTR CCA 90 bp ACAGAAAGACTGGATATTACCCCAGAGAATAAAGACTTGCAAAGCCTGGAACTTGGCCGTGCACAATGTTaGCCTGGACTGAAAAGGGCC +
Preference number: 2 (lower is better)
Translates to: TERLDITPENKDLQSLELGRAQC*PGLKRA
Trigger: GGCCCTTTTCAGTCCAGGCCAACATTGTGCACGGCC...AAGTTCCAGGCTTTGCAAGTCTTTATTCTCTGGGGTAATATCCAGTCTTTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR-3UTR TCA 90 bp TTAACTTTATCTGTACCTATGGGAGTCATCAATGGGGAGTGTCACAGGGCTTGGCTCTCTTGGTGTATGTaGCGGTTTCGCAATCAGAGA +
Preference number: 2 (lower is better)
Translates to: LTLSVPMGVINGECHRAWLSWCM*RFRNQR
Trigger: TCTCTGATTGCGAAACCGTCACATACACCAAGAGAG...CCAAGCCCTGTGACACTCCCCATTGATGACTCCCATAGGTACAGATAAAGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR-3UTR CCA 90 bp TTAATAACACCATGTGTTGGCAAGATACAGGAAATGGATACTCCCACACTCAGCCAGGATCATCCCTCATaGCTTCGTGCCATCTTCGTG +
Preference number: 2 (lower is better)
Translates to: LITPCVGKIQEMDTPTLSQDHPS*LRAIFV
Trigger: CACGAAGATGGCACGAAGCCATGAGGGATGATCCTG...GCTGAGTGTGGGAGTATCCATTTCCTGTATCTTGCCAACACATGGTGTTATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405673.5
3UTR-3UTR TCA 90 bp AAAGACTTGCAAAGCCTGGAACTTATAATGTTTGAAACCTGGTCTCTCGAACTTCTTGCAAAGTCCACCTaGAATGTGTCCGCGTCACCC +
Preference number: 2 (lower is better)
Translates to: KDLQSLELIMFETWSLELLAKST*NVSASP
Trigger: GGGTGACGCGGACACATTTCAGGTGGACTTTGCAAG...AAGTTCGAGAGACCAGGTTTCAAACATTATAAGTTCCAGGCTTTGCAAGTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR-3UTR CCA 90 bp ACAGAAAGACTGGATATTACCCCAGAGAATAAAGACTTGCAAAGCCTGGAACTTTGCACAATGTTGGCCTaGACTGAAAAGGGCCTCTGG +
Preference number: 2 (lower is better)
Translates to: TERLDITPENKDLQSLELCTMLA*TEKGLW
Trigger: CCAGAGGCCCTTTTCAGTCCAGGCCAACATTGTGCA...AAGTTCCAGGCTTTGCAAGTCTTTATTCTCTGGGGTAATATCCAGTCTTTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR-3UTR TCA 90 bp TCTTTGGCAGCTACTGTTGCTTGGACAGTCTTTACTCTTCCCCTTTTATTACGACTCTCTTGGTGTATGTaGCGGTTTCGCAATCAGAGA +
Preference number: 2 (lower is better)
Translates to: SLAATVAWTVFTLPLLLRLSWCM*RFRNQR
Trigger: TCTCTGATTGCGAAACCGTCACATACACCAAGAGAG...TCGTAATAAAAGGGGAAGAGTAAAGACTGTCCAAGCAACAGTAGCTGCCAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR-3UTR GCA 90 bp ACAGAAAGACTGGATATTACCCCAGAGAATAAAGACTTGCAAAGCCTGGAACTTTTGAGATCGTACCACTaGACTCTGTCCTGGGTGACA +
Preference number: 2 (lower is better)
Translates to: TERLDITPENKDLQSLELLRSYH*TLSWVT
Trigger: TGTCACCCAGGACAGAGTGCAGTGGTACGATCTCAA...AAGTTCCAGGCTTTGCAAGTCTTTATTCTCTGGGGTAATATCCAGTCTTTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR-3UTR GCA 90 bp TTAATAACACCATGTGTTGGCAAGATACAGGAAATGGATACTCCCACACTCAGCAAGCAGATGCTGCTATaGTTCCTAGACAGCTGTGGA +
Preference number: 2 (lower is better)
Translates to: LITPCVGKIQEMDTPTLSKQMLL*FLDSCG
Trigger: TCCACAGCTGTCTAGGAAGCATAGCAGCATCTGCTT...GCTGAGTGTGGGAGTATCCATTTCCTGTATCTTGCCAACACATGGTGTTATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405673.5
3UTR-3UTR CCA 90 bp TTAATAACACCATGTGTTGGCAAGATACAGGAAATGGATACTCCCACACTCAGCCTCTGTCACCCAGGCTaGAATAAGTGGCATGATCAT +
Preference number: 2 (lower is better)
Translates to: LITPCVGKIQEMDTPTLSLCHPG*NKWHDH
Trigger: ATGATCATGCCACTTATTCCAGCCTGGGTGACAGAG...GCTGAGTGTGGGAGTATCCATTTCCTGTATCTTGCCAACACATGGTGTTATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405673.5
3UTR-3UTR CCA 90 bp ACACCATGTGTTGGCAAGATACAGGAAATGGATACTCCCACACTCAGCCACTACCTAACTGATATAGTCTaGACATTTGTCCCCACGAAA +
Preference number: 2 (lower is better)
Translates to: TPCVGKIQEMDTPTLSHYLTDIV*TFVPTK
Trigger: TTTCGTGGGGACAAATGTCCAGACTATATCAGTTAG...GTAGTGGCTGAGTGTGGGAGTATCCATTTCCTGTATCTTGCCAACACATGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405673.5
3UTR-3UTR CCA 90 bp ACAGAAAGACTGGATATTACCCCAGAGAATAAAGACTTGCAAAGCCTGGAACTTGCAGCTACTGTTGCTTaGACAGTCTTTACTCTTCCC +
Preference number: 2 (lower is better)
Translates to: TERLDITPENKDLQSLELAATVA*TVFTLP
Trigger: GGGAAGAGTAAAGACTGTCCAAGCAACAGTAGCTGC...AAGTTCCAGGCTTTGCAAGTCTTTATTCTCTGGGGTAATATCCAGTCTTTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR-3UTR GCA 90 bp TTAACTTTATCTGTACCTATGGGAGTCATCAATGGGGAGTGTCACAGGGCTTGGGAAGGTTTAAAGTGTTaGAGGCCCTTTTCAAGTTTT +
Preference number: 2 (lower is better)
Translates to: LTLSVPMGVINGECHRAWEGLKC*RPFSSF
Trigger: AAAACTTGAAAAGGGCCTGCAACACTTTAAACCTTC...CCAAGCCCTGTGACACTCCCCATTGATGACTCCCATAGGTACAGATAAAGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR-3UTR CCA 90 bp CTGGATATTACCCCAGAGAATAAAGACTTGCAAAGCCTGGAACTTATAATGTTTACTGAAAAGGGCCTCTaGCTCCTCCGATTTCAGTTC +
Preference number: 2 (lower is better)
Translates to: LDITPENKDLQSLELIMFTEKGL*LLRFQF
Trigger: GAACTGAAATCGGAGGAGCCAGAGGCCCTTTTCAGT...AAACATTATAAGTTCCAGGCTTTGCAAGTCTTTATTCTCTGGGGTAATATCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR-3UTR GCA 90 bp ACAGAAAGACTGGATATTACCCCAGAGAATAAAGACTTGCAAAGCCTGGAACTTAAAATGTGTTTATTTTaGTGGGCGCAGTGGCTCATG +
Preference number: 2 (lower is better)
Translates to: TERLDITPENKDLQSLELKMCLF*WAQWLM
Trigger: CATGAGCCACTGCGCCCAGCAAAATAAACACATTTT...AAGTTCCAGGCTTTGCAAGTCTTTATTCTCTGGGGTAATATCCAGTCTTTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR-3UTR CCA 90 bp CTGGATATTACCCCAGAGAATAAAGACTTGCAAAGCCTGGAACTTATAATGTTTGCAGCTACTGTTGCTTaGACAGTCTTTACTCTTCCC +
Preference number: 2 (lower is better)
Translates to: LDITPENKDLQSLELIMFAATVA*TVFTLP
Trigger: GGGAAGAGTAAAGACTGTCCAAGCAACAGTAGCTGC...AAACATTATAAGTTCCAGGCTTTGCAAGTCTTTATTCTCTGGGGTAATATCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR-3UTR GCA 90 bp AAAGACTTGCAAAGCCTGGAACTTATAATGTTTGAAACCTGGTCTCTCGAACTTCTATCCATCAGTCCTTaGAAAGTCCACCTGAAATGT +
Preference number: 2 (lower is better)
Translates to: KDLQSLELIMFETWSLELLSISP*KVHLKC
Trigger: ACATTTCAGGTGGACTTTGCAAGGACTGATGGATAG...AAGTTCGAGAGACCAGGTTTCAAACATTATAAGTTCCAGGCTTTGCAAGTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR-3UTR GCA 90 bp AAAGACTTGCAAAGCCTGGAACTTATAATGTTTGAAACCTGGTCTCTCGAACTTTTTGGCAGCTACTGTTaGTTGGACAGTCTTTACTCT +
Preference number: 2 (lower is better)
Translates to: KDLQSLELIMFETWSLELFGSYC*LDSLYS
Trigger: AGAGTAAAGACTGTCCAAGCAACAGTAGCTGCCAAA...AAGTTCGAGAGACCAGGTTTCAAACATTATAAGTTCCAGGCTTTGCAAGTCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR GCA 72 bp ACTGTAGGGCCGCTCATGCACCGCCACAGAAGCCTCTaGCGGGTCACAGTCAGAGAAGCTCCCCGGGCACCG +
Preference number: 3 (lower is better)
Translates to: TVGPLMHRHRSL*RVTVREAPRAP
Trigger: CGGTGCCCGGGGAGCTTCTCTGACTGTGACCCGGCAGAGGCTTCTGTGGCGGTGCATGAGCGGCCCTACAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR CCA 72 bp CCCGGTTGTCAGTCCCACAGTGGCCGTGCACAATGTTaGCCTGGACTGAAAAGGGCCTCTGGCTCCTCCGAT +
Preference number: 3 (lower is better)
Translates to: PGCQSHSGRAQC*PGLKRASGSSD
Trigger: ATCGGAGGAGCCAGAGGCCCTTTTCAGTCCAGGCCAACATTGTGCACGGCCACTGTGGGACTGACAACCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR GCA 72 bp ACAGGGGAGCCCTCTCACCCAGCCTTGAGGGCCACATaGCCATGTGGCTCTCTTGGTGTATGTGACGGTTTC +
Preference number: 3 (lower is better)
Translates to: TGEPSHPALRAT*PCGSLGVCDGF
Trigger: GAAACCGTCACATACACCAAGAGAGCCACATGGGCATGTGGCCCTCAAGGCTGGGTGAGAGGGCTCCCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR GCA 72 bp CTTGAGCTATCCCGGTTGTCAGTCCCACAGTGGCCGTaGACAATGTTGGCCTGGACTGAAAAGGGCCTCTGG +
Preference number: 3 (lower is better)
Translates to: LELSRLSVPQWP*TMLAWTEKGLW
Trigger: CCAGAGGCCCTTTTCAGTCCAGGCCAACATTGTGCACGGCCACTGTGGGACTGACAACCGGGATAGCTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR CCA 72 bp TTGTCAGTCCCACAGTGGCCGTGCACAATGTTGGCCTaGACTGAAAAGGGCCTCTGGCTCCTCCGATTTCAG +
Preference number: 3 (lower is better)
Translates to: LSVPQWPCTMLA*TEKGLWLLRFQ
Trigger: CTGAAATCGGAGGAGCCAGAGGCCCTTTTCAGTCCAGGCCAACATTGTGCACGGCCACTGTGGGACTGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR CCA 72 bp CTCGAACTTGAGCTATCCCGGTTGTCAGTCCCACAGTaGCCGTGCACAATGTTGGCCTGGACTGAAAAGGGC +
Preference number: 3 (lower is better)
Translates to: LELELSRLSVPQ*PCTMLAWTEKG
Trigger: GCCCTTTTCAGTCCAGGCCAACATTGTGCACGGCCACTGTGGGACTGACAACCGGGATAGCTCAAGTTCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR TCA 72 bp ACACCAGGTCCATCCCTTCCCACGGATTCTGGTCCCTaGGGTAGCTATCCATCAGTCCTTGCAAAGTCCACC +
Preference number: 3 (lower is better)
Translates to: TPGPSLPTDSGP*GSYPSVLAKST
Trigger: GGTGGACTTTGCAAGGACTGATGGATAGCTACCTCAGGGACCAGAATCCGTGGGAAGGGATGGACCTGGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR TCA 72 bp GAGGGCCACATGCCCATGTGGCTCTCTTGGTGTATGTaGCGGTTTCGCAATCAGAGATCCACGTGGAGTTCT +
Preference number: 3 (lower is better)
Translates to: EGHMPMWLSWCM*RFRNQRSTWSS
Trigger: AGAACTCCACGTGGATCTCTGATTGCGAAACCGTCACATACACCAAGAGAGCCACATGGGCATGTGGCCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR-3UTR CAA 90 bp ACTGTAGGGCCGCTCATGCACCGCCACAGAAGCCTCTGCCGGGTCACAGTCAGAAGAAGGTTTAAAGTGTaGCAGGCCCTTTTCAAGTTT +
Preference number: 3 (lower is better)
Translates to: TVGPLMHRHRSLCRVTVRRRFKV*QALFKF
Trigger: AAACTTGAAAAGGGCCTGCAACACTTTAAACCTTCT...TCTGACTGTGACCCGGCAGAGGCTTCTGTGGCGGTGCATGAGCGGCCCTACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR-3UTR CAA 90 bp TTATCTGTACCTATGGGAGTCATCAATGGGGAGTGTCACAGGGCTTGGCAAGAAGCCCATGTGGCTCTCTaGGTGTATGTGACGGTTTCG +
Preference number: 3 (lower is better)
Translates to: LSVPMGVINGECHRAWQEAHVAL*VYVTVS
Trigger: CGAAACCGTCACATACACCAAGAGAGCCACATGGGC...TTCTTGCCAAGCCCTGTGACACTCCCCATTGATGACTCCCATAGGTACAGATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR CCA 72 bp CCGTGCACAATGTTGGCCTGGACTGAAAAGGGCCTCTaGCTCCTCCGATTTCAGTTCTTAGCAATATCAGAC +
Preference number: 3 (lower is better)
Translates to: PCTMLAWTEKGL*LLRFQFLAISD
Trigger: GTCTGATATTGCTAAGAACTGAAATCGGAGGAGCCAGAGGCCCTTTTCAGTCCAGGCCAACATTGTGCACGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR-3UTR CAA 90 bp TTAACTTTATCTGTACCTATGGGAGTCATCAATGGGGAGTGTCACAGGGCTTGGGCTATCCATCAGTCCTaGCAAAGTCCACCTGAAATG +
Preference number: 3 (lower is better)
Translates to: LTLSVPMGVINGECHRAWAIHQS*QSPPEM
Trigger: CATTTCAGGTGGACTTTGCAAGGACTGATGGATAGC...CCAAGCCCTGTGACACTCCCCATTGATGACTCCCATAGGTACAGATAAAGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR TCA 72 bp TCATGGCTTCGTGCCATCTTCGTGACAGTGACTTCTTaGGAAATCTGGTCATTTAAAAGCATGTGGCACCAC +
Preference number: 3 (lower is better)
Translates to: SWLRAIFVTVTS*EIWSFKSMWHH
Trigger: GTGGTGCCACATGCTTTTAAATGACCAGATTTCTCAAGAAGTCACTGTCACGAAGATGGCACGAAGCCATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405673.5
3UTR GCA 72 bp AGAAGGTTTAAAGTGTTGCAGGCCCTTTTCAAGTTTTaGCTCCCTCACTCTCTGCAAACTCCCTTAATGTGG +
Preference number: 3 (lower is better)
Translates to: RRFKVLQALFKF*LPHSLQTPLMW
Trigger: CCACATTAAGGGAGTTTGCAGAGAGTGAGGGAGGCAAAACTTGAAAAGGGCCTGCAACACTTTAAACCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR CCA 72 bp GACTTGCAAAGCCTGGAACTTATAATGTTTGAAACCTaGTCTCTCGAACTTGAGCTATCCCGGTTGTCAGTC +
Preference number: 3 (lower is better)
Translates to: DLQSLELIMFET*SLELELSRLSV
Trigger: GACTGACAACCGGGATAGCTCAAGTTCGAGAGACCAGGTTTCAAACATTATAAGTTCCAGGCTTTGCAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR-3UTR CAA 90 bp CTGGATATTACCCCAGAGAATAAAGACTTGCAAAGCCTGGAACTTATAATGTTTGCCCATGTGGCTCTCTaGGTGTATGTGACGGTTTCG +
Preference number: 3 (lower is better)
Translates to: LDITPENKDLQSLELIMFAHVAL*VYVTVS
Trigger: CGAAACCGTCACATACACCAAGAGAGCCACATGGGC...AAACATTATAAGTTCCAGGCTTTGCAAGTCTTTATTCTCTGGGGTAATATCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR-3UTR CAA 90 bp TCTTTGGCAGCTACTGTTGCTTGGACAGTCTTTACTCTTCCCCTTTTATTACGAGCTATCCATCAGTCCTaGCAAAGTCCACCTGAAATG +
Preference number: 3 (lower is better)
Translates to: SLAATVAWTVFTLPLLLRAIHQS*QSPPEM
Trigger: CATTTCAGGTGGACTTTGCAAGGACTGATGGATAGC...TCGTAATAAAAGGGGAAGAGTAAAGACTGTCCAAGCAACAGTAGCTGCCAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR CCA 72 bp GGAGTTCTCCATACATTCCTCTTCGTTTGGGCACTGTaGTTACAGAAGGCTAGTTTTCAAGTTGCAGGTTTT +
Preference number: 3 (lower is better)
Translates to: GVLHTFLFVWAL*LQKASFQVAGF
Trigger: AAAACCTGCAACTTGAAAACTAGCCTTCTGTAACCACAGTGCCCAAACGAAGAGGAATGTATGGAGAACTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR-3UTR CAA 90 bp CTGGATATTACCCCAGAGAATAAAGACTTGCAAAGCCTGGAACTTATAATGTTTGGCAGCTACTGTTGCTaGGACAGTCTTTACTCTTCC +
Preference number: 3 (lower is better)
Translates to: LDITPENKDLQSLELIMFGSYCC*DSLYSS
Trigger: GGAAGAGTAAAGACTGTCCAAGCAACAGTAGCTGCC...AAACATTATAAGTTCCAGGCTTTGCAAGTCTTTATTCTCTGGGGTAATATCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR-3UTR CAA 90 bp ACAGAAAGACTGGATATTACCCCAGAGAATAAAGACTTGCAAAGCCTGGAACTTTTTCGTATTTTCTCTTaGGCAGCTACTGTTGCTTGG +
Preference number: 3 (lower is better)
Translates to: TERLDITPENKDLQSLELFRIFS*AATVAW
Trigger: CCAAGCAACAGTAGCTGCCAAAGAGAAAATACGAAA...AAGTTCCAGGCTTTGCAAGTCTTTATTCTCTGGGGTAATATCCAGTCTTTCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR GCA 90 bp CACAGGGGAGCCCTCTCACCCAGCCTTGAGGGCCACATGCCCATGTGGCTCTCTTCCGGGGGCCACTGCTaGGCTGACGCCAGTCCCGAT +
Preference number: 4 (lower is better)
Translates to: HRGALSPSLEGHMPMWLSSGGHC*ADASPD
Trigger: ATCGGGACTGGCGTCAGCGCAGCAGTGGCCCCCGGA...AGAGAGCCACATGGGCATGTGGCCCTCAAGGCTGGGTGAGAGGGCTCCCCTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR GCA 90 bp CACAGGGGAGCCCTCTCACCCAGCCTTGAGGGCCACATGCCCATGTGGCTCTCTGATTCCGGGGGCCACTaGTGCGCTGACGCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: HRGALSPSLEGHMPMWLSDSGGH*CADASP
Trigger: GGGACTGGCGTCAGCGCAGCAGTGGCCCCCGGAATC...AGAGAGCCACATGGGCATGTGGCCCTCAAGGCTGGGTGAGAGGGCTCCCCTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR GCA 90 bp CCACAGAAGCCTCTGCCGGGTCACAGTCAGAGAAGCTCCCCGGGCACCGGCAGCTGCAGCACCTCCAGCTaGTCTGCAGCCTCGATGACG +
Preference number: 4 (lower is better)
Translates to: PQKPLPGHSQRSSPGTGSCSTSS*SAASMT
Trigger: CGTCATCGAGGCTGCAGAGCAGCTGGAGGTGCTGCA...GCTGCCGGTGCCCGGGGAGCTTCTCTGACTGTGACCCGGCAGAGGCTTCTGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR TCA 90 bp CCACAGAAGCCTCTGCCGGGTCACAGTCAGAGAAGCTCCCCGGGCACCGGCAGCATGTTTGTGCGTGCGTaGGTGTCTTCCCCGCGCTCT +
Preference number: 4 (lower is better)
Translates to: PQKPLPGHSQRSSPGTGSMFVRA*VSSPRS
Trigger: AGAGCGCGGGGAAGACACTCACGCACGCACAAACAT...GCTGCCGGTGCCCGGGGAGCTTCTCTGACTGTGACCCGGCAGAGGCTTCTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216214.7
CDS-3UTR GCA 90 bp CCACAGAAGCCTCTGCCGGGTCACAGTCAGAGAAGCTCCCCGGGCACCGGCAGCGCCTTGAGGGCCACATaGCCATGTGGCTCTCTTGGT +
Preference number: 4 (lower is better)
Translates to: PQKPLPGHSQRSSPGTGSALRAT*PCGSLG
Trigger: ACCAAGAGAGCCACATGGGCATGTGGCCCTCAAGGC...GCTGCCGGTGCCCGGGGAGCTTCTCTGACTGTGACCCGGCAGAGGCTTCTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR GCA 90 bp CCACAGAAGCCTCTGCCGGGTCACAGTCAGAGAAGCTCCCCGGGCACCGGCAGCGTCCCACAGTGGCCGTaGACAATGTTGGCCTGGACT +
Preference number: 4 (lower is better)
Translates to: PQKPLPGHSQRSSPGTGSVPQWP*TMLAWT
Trigger: AGTCCAGGCCAACATTGTGCACGGCCACTGTGGGAC...GCTGCCGGTGCCCGGGGAGCTTCTCTGACTGTGACCCGGCAGAGGCTTCTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR TCA 90 bp ACTGTAGGGCCGCTCATGCACCGCCACAGAAGCCTCTGCCGGGTCACAGTCAGAGCTCTGCAGCCTCGATaGCGGCCTCGATGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: TVGPLMHRHRSLCRVTVRALQPR*RPRCSF
Trigger: GAAGCTGCATCGAGGCCGTCATCGAGGCTGCAGAGC...TCTGACTGTGACCCGGCAGAGGCTTCTGTGGCGGTGCATGAGCGGCCCTACAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR TCA 90 bp CACAGGGGAGCCCTCTCACCCAGCCTTGAGGGCCACATGCCCATGTGGCTCTCTCCCTGTCCATCAGGCTaGGGATCGACTGCAGCACCA +
Preference number: 4 (lower is better)
Translates to: HRGALSPSLEGHMPMWLSPCPSG*GSTAAP
Trigger: TGGTGCTGCAGTCGATCCTCAGCCTGATGGACAGGG...AGAGAGCCACATGGGCATGTGGCCCTCAAGGCTGGGTGAGAGGGCTCCCCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR TCA 90 bp ACTGTAGGGCCGCTCATGCACCGCCACAGAAGCCTCTGCCGGGTCACAGTCAGACCTCTCACCCAGCCTTaGGGGCCACATGCCCATGTG +
Preference number: 4 (lower is better)
Translates to: TVGPLMHRHRSLCRVTVRPLTQP*GPHAHV
Trigger: CACATGGGCATGTGGCCCTCAAGGCTGGGTGAGAGG...TCTGACTGTGACCCGGCAGAGGCTTCTGTGGCGGTGCATGAGCGGCCCTACAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR GCA 90 bp GCCTGTCAGATGGGAACGGGAACACCAGGTCCATCCCTTCCCACGGATTCTGGTTCTCGGGGAGGGGACTaGGCAGGCACGCGGGCTAGA +
Preference number: 4 (lower is better)
Translates to: ACQMGTGTPGPSLPTDSGSRGGD*AGTRAR
Trigger: TCTAGCCCGCGTGCCTGCGCAGTCCCCTCCCCGAGA...ACCAGAATCCGTGGGAAGGGATGGACCTGGTGTTCCCGTTCCCATCTGACAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441876.7
CDS-3UTR GCA 90 bp GCCTGTCAGATGGGAACGGGAACACCAGGTCCATCCCTTCCCACGGATTCTGGTGCGACGTCTCCGGGGTaGAGCACCTCCAGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: ACQMGTGTPGPSLPTDSGATSPG*STSSCS
Trigger: AGAGCAGCTGGAGGTGCTGCACCCCGGAGACGTCGC...ACCAGAATCCGTGGGAAGGGATGGACCTGGTGTTCCCGTTCCCATCTGACAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR GCA 90 bp CACAGGGGAGCCCTCTCACCCAGCCTTGAGGGCCACATGCCCATGTGGCTCTCTGGACTCCGGATGTGCTaGTCCAGGTCGTCAAACACC +
Preference number: 4 (lower is better)
Translates to: HRGALSPSLEGHMPMWLSGLRMC*SRSSNT
Trigger: GGTGTTTGACGACCTGGAGCAGCACATCCGGAGTCC...AGAGAGCCACATGGGCATGTGGCCCTCAAGGCTGGGTGAGAGGGCTCCCCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR GCA 90 bp CCACAGAAGCCTCTGCCGGGTCACAGTCAGAGAAGCTCCCCGGGCACCGGCAGCACGCCGTACTTCATGTaGCCTCTTGCCCATTCAAGG +
Preference number: 4 (lower is better)
Translates to: PQKPLPGHSQRSSPGTGSTPYFM*PLAHSR
Trigger: CCTTGAATGGGCAAGAGGGCACATGAAGTACGGCGT...GCTGCCGGTGCCCGGGGAGCTTCTCTGACTGTGACCCGGCAGAGGCTTCTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR TCA 90 bp CACAGGGGAGCCCTCTCACCCAGCCTTGAGGGCCACATGCCCATGTGGCTCTCTATCGCCTGTGCGAGGTaGCATCTTCCGGATCAGATC +
Preference number: 4 (lower is better)
Translates to: HRGALSPSLEGHMPMWLSIACAR*HLPDQI
Trigger: GATCTGATCCGGAAGATGTCACCTCGCACAGGCGAT...AGAGAGCCACATGGGCATGTGGCCCTCAAGGCTGGGTGAGAGGGCTCCCCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR TCA 90 bp GCCTGTCAGATGGGAACGGGAACACCAGGTCCATCCCTTCCCACGGATTCTGGTGGCAGGAGAATCACTTaGGCCCAGGCGGTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: ACQMGTGTPGPSLPTDSGGRRIT*AQAVVA
Trigger: AGCCACCACCGCCTGGGCTCAAGTGATTCTCCTGCC...ACCAGAATCCGTGGGAAGGGATGGACCTGGTGTTCCCGTTCCCATCTGACAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR GCA 90 bp GCCTGTCAGATGGGAACGGGAACACCAGGTCCATCCCTTCCCACGGATTCTGGTCGAGGACTGAGATTGTaGGTGGGTGGGCTGGGCACG +
Preference number: 4 (lower is better)
Translates to: ACQMGTGTPGPSLPTDSGRGLRL*VGGLGT
Trigger: CGTGCCCAGCCCACCCACGCACAATCTCAGTCCTCG...ACCAGAATCCGTGGGAAGGGATGGACCTGGTGTTCCCGTTCCCATCTGACAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216214.7
CDS-3UTR GCA 90 bp GTCCACCTGAAATGTGTCCGCGTCACCCTCCTGCATAGTTCAACACACAGGGGAGGTCCCAGCTCGCGCTaGCACCTCTTCGCCTCCGCA +
Preference number: 4 (lower is better)
Translates to: VHLKCVRVTLLHSSTHRGGPSSR*HLFASA
Trigger: TGCGGAGGCGAAGAGGTGGCAGCGCGAGCTGGGACC...TCCCCTGTGTGTTGAACTATGCAGGAGGGTGACGCGGACACATTTCAGGTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR GCA 90 bp GCCTGTCAGATGGGAACGGGAACACCAGGTCCATCCCTTCCCACGGATTCTGGTCACCTCCAGCTGCTCTaGAGCCTCGATGACGGCCTC +
Preference number: 4 (lower is better)
Translates to: ACQMGTGTPGPSLPTDSGHLQLL*SLDDGL
Trigger: GAGGCCGTCATCGAGGCTGCAGAGCAGCTGGAGGTG...ACCAGAATCCGTGGGAAGGGATGGACCTGGTGTTCCCGTTCCCATCTGACAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CCA 90 bp ACTGTAGGGCCGCTCATGCACCGCCACAGAAGCCTCTGCCGGGTCACAGTCAGAGGTTGTCATAGTTGGTaGTCAGGACCATGGCGCCCC +
Preference number: 4 (lower is better)
Translates to: TVGPLMHRHRSLCRVTVRGCHSW*SGPWRP
Trigger: GGGGCGCCATGGTCCTGACCACCAACTATGACAACC...TCTGACTGTGACCCGGCAGAGGCTTCTGTGGCGGTGCATGAGCGGCCCTACAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CCA 90 bp ACTGTAGGGCCGCTCATGCACCGCCACAGAAGCCTCTGCCGGGTCACAGTCAGAGTCTTTATACCCCGATaGGTCCAGCACCACCCCGCA +
Preference number: 4 (lower is better)
Translates to: TVGPLMHRHRSLCRVTVRVFIPR*VQHHPA
Trigger: TGCGGGGTGGTGCTGGACCCATCGGGGTATAAAGAC...TCTGACTGTGACCCGGCAGAGGCTTCTGTGGCGGTGCATGAGCGGCCCTACAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR TCA 90 bp ACTGTAGGGCCGCTCATGCACCGCCACAGAAGCCTCTGCCGGGTCACAGTCAGAATCGCCTGTGCGAGGTaGCATCTTCCGGATCAGATC +
Preference number: 4 (lower is better)
Translates to: TVGPLMHRHRSLCRVTVRIACAR*HLPDQI
Trigger: GATCTGATCCGGAAGATGTCACCTCGCACAGGCGAT...TCTGACTGTGACCCGGCAGAGGCTTCTGTGGCGGTGCATGAGCGGCCCTACAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR TCA 90 bp CCACAGAAGCCTCTGCCGGGTCACAGTCAGAGAAGCTCCCCGGGCACCGGCAGCCTCTCTTGGTGTATGTaGCGGTTTCGCAATCAGAGA +
Preference number: 4 (lower is better)
Translates to: PQKPLPGHSQRSSPGTGSLSWCM*RFRNQR
Trigger: TCTCTGATTGCGAAACCGTCACATACACCAAGAGAG...GCTGCCGGTGCCCGGGGAGCTTCTCTGACTGTGACCCGGCAGAGGCTTCTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR TCA 90 bp ACTGTAGGGCCGCTCATGCACCGCCACAGAAGCCTCTGCCGGGTCACAGTCAGACTTGCAAAGTCCACCTaGAATGTGTCCGCGTCACCC +
Preference number: 4 (lower is better)
Translates to: TVGPLMHRHRSLCRVTVRLAKST*NVSASP
Trigger: GGGTGACGCGGACACATTTCAGGTGGACTTTGCAAG...TCTGACTGTGACCCGGCAGAGGCTTCTGTGGCGGTGCATGAGCGGCCCTACAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR TCA 90 bp GGTCTCTCGAACTTGAGCTATCCCGGTTGTCAGTCCCACAGTGGCCGTGCACAAGGCAGGAGAATCACTTaGGCCCAGGCGGTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: GLSNLSYPGCQSHSGRAQGRRIT*AQAVVA
Trigger: AGCCACCACCGCCTGGGCTCAAGTGATTCTCCTGCC...TTGTGCACGGCCACTGTGGGACTGACAACCGGGATAGCTCAAGTTCGAGAGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR GCA 90 bp GTCCACCTGAAATGTGTCCGCGTCACCCTCCTGCATAGTTCAACACACAGGGGAGCGACGTCTCCGGGGTaGAGCACCTCCAGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: VHLKCVRVTLLHSSTHRGATSPG*STSSCS
Trigger: AGAGCAGCTGGAGGTGCTGCACCCCGGAGACGTCGC...TCCCCTGTGTGTTGAACTATGCAGGAGGGTGACGCGGACACATTTCAGGTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR TCA 90 bp CCACAGAAGCCTCTGCCGGGTCACAGTCAGAGAAGCTCCCCGGGCACCGGCAGCCGAAAAATACCACCTTaGCAAAAGAGAGCCTGTCAG +
Preference number: 4 (lower is better)
Translates to: PQKPLPGHSQRSSPGTGSRKIPP*QKRACQ
Trigger: CTGACAGGCTCTCTTTTGTCAAGGTGGTATTTTTCG...GCTGCCGGTGCCCGGGGAGCTTCTCTGACTGTGACCCGGCAGAGGCTTCTGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR GCA 90 bp GAGTACAGTGATCTCAGCTCACTGCAACCATCTCCCTCCCAGTTCCAGCTATTCGGTCCCAGCTCGCGCTaGCACCTCTTCGCCTCCGCA +
Preference number: 4 (lower is better)
Translates to: EYSDLSSLQPSPSQFQLFGPSSR*HLFASA
Trigger: TGCGGAGGCGAAGAGGTGGCAGCGCGAGCTGGGACC...GAATAGCTGGAACTGGGAGGGAGATGGTTGCAGTGAGCTGAGATCACTGTACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405673.5
CDS-3UTR GCA 90 bp TATTGGAAACTTCCTGAGGCCTCCCCGGAAGCAGATGCTGCTATGCTTCCTAGATCCGGGGGCCACTGCTaGGCTGACGCCAGTCCCGAT +
Preference number: 4 (lower is better)
Translates to: YWKLPEASPEADAAMLPRSGGHC*ADASPD
Trigger: ATCGGGACTGGCGTCAGCGCAGCAGTGGCCCCCGGA...TCTAGGAAGCATAGCAGCATCTGCTTCCGGGGAGGCCTCAGGAAGTTTCCAATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000405673.5
CDS-3UTR GCA 90 bp GTCCACCTGAAATGTGTCCGCGTCACCCTCCTGCATAGTTCAACACACAGGGGACACCTCCAGCTGCTCTaGAGCCTCGATGACGGCCTC +
Preference number: 4 (lower is better)
Translates to: VHLKCVRVTLLHSSTHRGHLQLL*SLDDGL
Trigger: GAGGCCGTCATCGAGGCTGCAGAGCAGCTGGAGGTG...TCCCCTGTGTGTTGAACTATGCAGGAGGGTGACGCGGACACATTTCAGGTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR GCA 90 bp CTGCCTTCTGCCACTATTGGAAACTTCCTGAGGCCTCCCCGGAAGCAGATGCTGTGCAGCACCTCCAGCTaGTCTGCAGCCTCGATGACG +
Preference number: 4 (lower is better)
Translates to: LPSATIGNFLRPPRKQMLCSTSS*SAASMT
Trigger: CGTCATCGAGGCTGCAGAGCAGCTGGAGGTGCTGCA...CAGCATCTGCTTCCGGGGAGGCCTCAGGAAGTTTCCAATAGTGGCAGAAGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405673.5
CDS-3UTR CCA 90 bp ACATGCCCATGTGGCTCTCTTGGTGTATGTGACGGTTTCGCAATCAGAGATCCAGCGCCTCCGAGACGCTaGTCCCAGCTCGCGCTGCCA +
Preference number: 4 (lower is better)
Translates to: TCPCGSLGVCDGFAIRDPAPPRR*SQLALP
Trigger: TGGCAGCGCGAGCTGGGACCAGCGTCTCGGAGGCGC...TGGATCTCTGATTGCGAAACCGTCACATACACCAAGAGAGCCACATGGGCATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CCA 90 bp ACTGTAGGGCCGCTCATGCACCGCCACAGAAGCCTCTGCCGGGTCACAGTCAGATTCCGGATCAGATCATaGGCGACAACCAACAGGTCC +
Preference number: 4 (lower is better)
Translates to: TVGPLMHRHRSLCRVTVRFRIRS*ATTNRS
Trigger: GGACCTGTTGGTTGTCGCCCATGATCTGATCCGGAA...TCTGACTGTGACCCGGCAGAGGCTTCTGTGGCGGTGCATGAGCGGCCCTACAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CCA 90 bp GTCCACCTGAAATGTGTCCGCGTCACCCTCCTGCATAGTTCAACACACAGGGGATGGTGGTCAGGACCATaGCGCCCCTGTCCATCAGGC +
Preference number: 4 (lower is better)
Translates to: VHLKCVRVTLLHSSTHRGWWSGP*RPCPSG
Trigger: GCCTGATGGACAGGGGCGCCATGGTCCTGACCACCA...TCCCCTGTGTGTTGAACTATGCAGGAGGGTGACGCGGACACATTTCAGGTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CCA 90 bp GCCTGTCAGATGGGAACGGGAACACCAGGTCCATCCCTTCCCACGGATTCTGGTGGTTGTCATAGTTGGTaGTCAGGACCATGGCGCCCC +
Preference number: 4 (lower is better)
Translates to: ACQMGTGTPGPSLPTDSGGCHSW*SGPWRP
Trigger: GGGGCGCCATGGTCCTGACCACCAACTATGACAACC...ACCAGAATCCGTGGGAAGGGATGGACCTGGTGTTCCCGTTCCCATCTGACAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CCA 90 bp ACTGTAGGGCCGCTCATGCACCGCCACAGAAGCCTCTGCCGGGTCACAGTCAGATGCACAATGTTGGCCTaGACTGAAAAGGGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: TVGPLMHRHRSLCRVTVRCTMLA*TEKGLW
Trigger: CCAGAGGCCCTTTTCAGTCCAGGCCAACATTGTGCA...TCTGACTGTGACCCGGCAGAGGCTTCTGTGGCGGTGCATGAGCGGCCCTACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR TCA 90 bp ACTGTAGGGCCGCTCATGCACCGCCACAGAAGCCTCTGCCGGGTCACAGTCAGACTTCTGCGTCTTGAGTaGCGTCTTTATACCCCGATG +
Preference number: 4 (lower is better)
Translates to: TVGPLMHRHRSLCRVTVRLLRLE*RLYTPM
Trigger: CATCGGGGTATAAAGACGTCACTCAAGACGCAGAAG...TCTGACTGTGACCCGGCAGAGGCTTCTGTGGCGGTGCATGAGCGGCCCTACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR TCA 90 bp CACAGGGGAGCCCTCTCACCCAGCCTTGAGGGCCACATGCCCATGTGGCTCTCTATGACTTCTGCGTCTTaGGTGACGTCTTTATACCCC +
Preference number: 4 (lower is better)
Translates to: HRGALSPSLEGHMPMWLSMTSAS*VTSLYP
Trigger: GGGGTATAAAGACGTCACTCAAGACGCAGAAGTCAT...AGAGAGCCACATGGGCATGTGGCCCTCAAGGCTGGGTGAGAGGGCTCCCCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR TCA 90 bp GCCTGTCAGATGGGAACGGGAACACCAGGTCCATCCCTTCCCACGGATTCTGGTAGGGCCTGGAATATCTaGTCACGAAGGGTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: ACQMGTGTPGPSLPTDSGRAWNI*SRRVSP
Trigger: TGGGGAGACCCTTCGTGATCAGATATTCCAGGCCCT...ACCAGAATCCGTGGGAAGGGATGGACCTGGTGTTCCCGTTCCCATCTGACAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR TCA 90 bp GCCTGTCAGATGGGAACGGGAACACCAGGTCCATCCCTTCCCACGGATTCTGGTCTTGCAAAGTCCACCTaGAATGTGTCCGCGTCACCC +
Preference number: 4 (lower is better)
Translates to: ACQMGTGTPGPSLPTDSGLAKST*NVSASP
Trigger: GGGTGACGCGGACACATTTCAGGTGGACTTTGCAAG...ACCAGAATCCGTGGGAAGGGATGGACCTGGTGTTCCCGTTCCCATCTGACAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR GCA 90 bp ACGTGGAGTTCTCCATACATTCCTCTTCGTTTGGGCACTGTGGTTACAGAAGGCGGTCCCAGCTCGCGCTaGCACCTCTTCGCCTCCGCA +
Preference number: 4 (lower is better)
Translates to: TWSSPYIPLRLGTVVTEGGPSSR*HLFASA
Trigger: TGCGGAGGCGAAGAGGTGGCAGCGCGAGCTGGGACC...GCCTTCTGTAACCACAGTGCCCAAACGAAGAGGAATGTATGGAGAACTCCACGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR GCA 90 bp ACGTGGAGTTCTCCATACATTCCTCTTCGTTTGGGCACTGTGGTTACAGAAGGCTCCGGGGGCCACTGCTaGGCTGACGCCAGTCCCGAT +
Preference number: 4 (lower is better)
Translates to: TWSSPYIPLRLGTVVTEGSGGHC*ADASPD
Trigger: ATCGGGACTGGCGTCAGCGCAGCAGTGGCCCCCGGA...GCCTTCTGTAACCACAGTGCCCAAACGAAGAGGAATGTATGGAGAACTCCACGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR GCA 90 bp ACTGTAGGGCCGCTCATGCACCGCCACAGAAGCCTCTGCCGGGTCACAGTCAGACTGGGCTTTGCTGTTTaGAGATCTGAGTGGCAAGGT +
Preference number: 4 (lower is better)
Translates to: TVGPLMHRHRSLCRVTVRLGFAV*RSEWQG
Trigger: ACCTTGCCACTCAGATCTGCAAACAGCAAAGCCCAG...TCTGACTGTGACCCGGCAGAGGCTTCTGTGGCGGTGCATGAGCGGCCCTACAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR GCA 90 bp CCACAGAAGCCTCTGCCGGGTCACAGTCAGAGAAGCTCCCCGGGCACCGGCAGCTTTGGCAGCTACTGTTaGTTGGACAGTCTTTACTCT +
Preference number: 4 (lower is better)
Translates to: PQKPLPGHSQRSSPGTGSFGSYC*LDSLYS
Trigger: AGAGTAAAGACTGTCCAAGCAACAGTAGCTGCCAAA...GCTGCCGGTGCCCGGGGAGCTTCTCTGACTGTGACCCGGCAGAGGCTTCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CCA 90 bp ACGTGGAGTTCTCCATACATTCCTCTTCGTTTGGGCACTGTGGTTACAGAAGGCGAGATTGTGCGTGGGTaGGCTGGGCACGGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: TWSSPYIPLRLGTVVTEGEIVRG*AGHGPP
Trigger: AGGGGGCCCGTGCCCAGCCCACCCACGCACAATCTC...GCCTTCTGTAACCACAGTGCCCAAACGAAGAGGAATGTATGGAGAACTCCACGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216214.7
CDS-3UTR CCA 90 bp GCCTGTCAGATGGGAACGGGAACACCAGGTCCATCCCTTCCCACGGATTCTGGTTCCATCAGGCAGTCCTaGAAGAAGCTGGGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: ACQMGTGTPGPSLPTDSGSIRQS*KKLGLA
Trigger: TGCCAAGCCCAGCTTCTTCCAGGACTGCCTGATGGA...ACCAGAATCCGTGGGAAGGGATGGACCTGGTGTTCCCGTTCCCATCTGACAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CCA 90 bp CACAGGGGAGCCCTCTCACCCAGCCTTGAGGGCCACATGCCCATGTGGCTCTCTCCCATTCAAGGACCTTaGTCTTGTCCTTCAAGTCCA +
Preference number: 4 (lower is better)
Translates to: HRGALSPSLEGHMPMWLSPIQGP*SCPSSP
Trigger: TGGACTTGAAGGACAAGACCAAGGTCCTTGAATGGG...AGAGAGCCACATGGGCATGTGGCCCTCAAGGCTGGGTGAGAGGGCTCCCCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CCA 90 bp GGTCTCTCGAACTTGAGCTATCCCGGTTGTCAGTCCCACAGTGGCCGTGCACAAGGCCGTGCACAATGTTaGCCTGGACTGAAAAGGGCC +
Preference number: 4 (lower is better)
Translates to: GLSNLSYPGCQSHSGRAQGRAQC*PGLKRA
Trigger: GGCCCTTTTCAGTCCAGGCCAACATTGTGCACGGCC...TTGTGCACGGCCACTGTGGGACTGACAACCGGGATAGCTCAAGTTCGAGAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR GCA 90 bp ACACCATGTGTTGGCAAGATACAGGAAATGGATACTCCCACACTCAGCCACTACGATTCCGGGGGCCACTaGTGCGCTGACGCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: TPCVGKIQEMDTPTLSHYDSGGH*CADASP
Trigger: GGGACTGGCGTCAGCGCAGCAGTGGCCCCCGGAATC...GTAGTGGCTGAGTGTGGGAGTATCCATTTCCTGTATCTTGCCAACACATGGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405673.5
CDS-3UTR GCA 90 bp CTATTCTCCTGCCTCAGCCTCCCAAGTTGCCAGTGTGCCACTTTCCATTATTACGCGACGTCTCCGGGGTaGAGCACCTCCAGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: LFSCLSLPSCQCATFHYYATSPG*STSSCS
Trigger: AGAGCAGCTGGAGGTGCTGCACCCCGGAGACGTCGC...GTAATAATGGAAAGTGGCACACTGGCAACTTGGGAGGCTGAGGCAGGAGAATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405673.5
CDS-3UTR GCA 90 bp GGTCTCTCGAACTTGAGCTATCCCGGTTGTCAGTCCCACAGTGGCCGTGCACAAACAGGACTCCGGATGTaGTGCTCCAGGTCGTCAAAC +
Preference number: 4 (lower is better)
Translates to: GLSNLSYPGCQSHSGRAQTGLRM*CSRSSN
Trigger: GTTTGACGACCTGGAGCAGCACATCCGGAGTCCTGT...TTGTGCACGGCCACTGTGGGACTGACAACCGGGATAGCTCAAGTTCGAGAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR GCA 90 bp CACAGGGGAGCCCTCTCACCCAGCCTTGAGGGCCACATGCCCATGTGGCTCTCTGACTTCCATGACTTCTaGGTCTTGAGTGACGTCTTT +
Preference number: 4 (lower is better)
Translates to: HRGALSPSLEGHMPMWLSDFHDF*VLSDVF
Trigger: AAAGACGTCACTCAAGACGCAGAAGTCATGGAAGTC...AGAGAGCCACATGGGCATGTGGCCCTCAAGGCTGGGTGAGAGGGCTCCCCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR GCA 90 bp ACTGTAGGGCCGCTCATGCACCGCCACAGAAGCCTCTGCCGGGTCACAGTCAGATACCCAATAATGTGGTaGTGTCCACGCGATCAGCAT +
Preference number: 4 (lower is better)
Translates to: TVGPLMHRHRSLCRVTVRYPIMW*CPRDQH
Trigger: ATGCTGATCGCGTGGACAGCACCACATTATTGGGTA...TCTGACTGTGACCCGGCAGAGGCTTCTGTGGCGGTGCATGAGCGGCCCTACAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR GCA 90 bp ACTGTAGGGCCGCTCATGCACCGCCACAGAAGCCTCTGCCGGGTCACAGTCAGATTCTCTCCCTCCCTATaGATCCTACCCTTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: TVGPLMHRHRSLCRVTVRFSPSL*ILPFCF
Trigger: GAAACAGAAGGGTAGGATGCATAGGGAGGGAGAGAA...TCTGACTGTGACCCGGCAGAGGCTTCTGTGGCGGTGCATGAGCGGCCCTACAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR GCA 90 bp CTCCTGCCTCAGCCTCCCAAGTTGCCAGTGTGCCACTTTCCATTATTACTTTTTCCCAGTAGCGGGGACTaGAGGCAGGCGCCACCATGC +
Preference number: 4 (lower is better)
Translates to: LLPQPPKLPVCHFPLLLFPSSGD*RQAPPC
Trigger: GCATGGTGGCGCCTGCCTGCAGTCCCCGCTACTGGG...AAAAAGTAATAATGGAAAGTGGCACACTGGCAACTTGGGAGGCTGAGGCAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000405673.5
CDS-3UTR CCA 90 bp GTCCACCTGAAATGTGTCCGCGTCACCCTCCTGCATAGTTCAACACACAGGGGAACCAGGAGCAGTTCCTaGGGCTGTTTCCGGATGAGG +
Preference number: 4 (lower is better)
Translates to: VHLKCVRVTLLHSSTHRGTRSSS*GCFRMR
Trigger: CCTCATCCGGAAACAGCCCCAGGAACTGCTCCTGGT...TCCCCTGTGTGTTGAACTATGCAGGAGGGTGACGCGGACACATTTCAGGTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CCA 90 bp ACTGTAGGGCCGCTCATGCACCGCCACAGAAGCCTCTGCCGGGTCACAGTCAGACCCATTCAAGGACCTTaGTCTTGTCCTTCAAGTCCA +
Preference number: 4 (lower is better)
Translates to: TVGPLMHRHRSLCRVTVRPIQGP*SCPSSP
Trigger: TGGACTTGAAGGACAAGACCAAGGTCCTTGAATGGG...TCTGACTGTGACCCGGCAGAGGCTTCTGTGGCGGTGCATGAGCGGCCCTACAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CCA 90 bp ACTGTAGGGCCGCTCATGCACCGCCACAGAAGCCTCTGCCGGGTCACAGTCAGACATTACCCAATAATGTaGTGCTGTCCACGCGATCAG +
Preference number: 4 (lower is better)
Translates to: TVGPLMHRHRSLCRVTVRHYPIM*CCPRDQ
Trigger: CTGATCGCGTGGACAGCACCACATTATTGGGTAATG...TCTGACTGTGACCCGGCAGAGGCTTCTGTGGCGGTGCATGAGCGGCCCTACAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CCA 90 bp GTCCACCTGAAATGTGTCCGCGTCACCCTCCTGCATAGTTCAACACACAGGGGAGGCCGTGCACAATGTTaGCCTGGACTGAAAAGGGCC +
Preference number: 4 (lower is better)
Translates to: VHLKCVRVTLLHSSTHRGGRAQC*PGLKRA
Trigger: GGCCCTTTTCAGTCCAGGCCAACATTGTGCACGGCC...TCCCCTGTGTGTTGAACTATGCAGGAGGGTGACGCGGACACATTTCAGGTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR TCA 90 bp ACTATTGGAAACTTCCTGAGGCCTCCCCGGAAGCAGATGCTGCTATGCTTCCTACCCTGTCCATCAGGCTaGGGATCGACTGCAGCACCA +
Preference number: 4 (lower is better)
Translates to: TIGNFLRPPRKQMLLCFLPCPSG*GSTAAP
Trigger: TGGTGCTGCAGTCGATCCTCAGCCTGATGGACAGGG...TAGGAAGCATAGCAGCATCTGCTTCCGGGGAGGCCTCAGGAAGTTTCCAATAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405673.5
CDS-3UTR GCA 90 bp ACTGTAGGGCCGCTCATGCACCGCCACAGAAGCCTCTGCCGGGTCACAGTCAGAACAGAAAGGACTTGGTaGGGTATAAGTTCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: TVGPLMHRHRSLCRVTVRTERTW*GISSGG
Trigger: TCCTCCAGAACTTATACCGCACCAAGTCCTTTCTGT...TCTGACTGTGACCCGGCAGAGGCTTCTGTGGCGGTGCATGAGCGGCCCTACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR GCA 90 bp CCACAGAAGCCTCTGCCGGGTCACAGTCAGAGAAGCTCCCCGGGCACCGGCAGCGAAGGTTTAAAGTGTTaGAGGCCCTTTTCAAGTTTT +
Preference number: 4 (lower is better)
Translates to: PQKPLPGHSQRSSPGTGSEGLKC*RPFSSF
Trigger: AAAACTTGAAAAGGGCCTGCAACACTTTAAACCTTC...GCTGCCGGTGCCCGGGGAGCTTCTCTGACTGTGACCCGGCAGAGGCTTCTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR GCA 90 bp CTGCCTTCTGCCACTATTGGAAACTTCCTGAGGCCTCCCCGGAAGCAGATGCTGTTCCAGCTATTCTCCTaGCTCAGCCTCCCAAGTTGC +
Preference number: 4 (lower is better)
Translates to: LPSATIGNFLRPPRKQMLFQLFS*LSLPSC
Trigger: GCAACTTGGGAGGCTGAGGCAGGAGAATAGCTGGAA...CAGCATCTGCTTCCGGGGAGGCCTCAGGAAGTTTCCAATAGTGGCAGAAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405673.5
CDS-3UTR GCA 90 bp GAGTACAGTGATCTCAGCTCACTGCAACCATCTCCCTCCCAGTTCCAGCTATTCGCCATGTGGCATGCCTaGTCCCACTCTGCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: EYSDLSSLQPSPSQFQLFAMWHA*SHSAFC
Trigger: GCAGAAGGCAGAGTGGGAGCAGGCATGCCACATGGC...GAATAGCTGGAACTGGGAGGGAGATGGTTGCAGTGAGCTGAGATCACTGTACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405673.5
CDS-3UTR CCA 90 bp GGTCTCTCGAACTTGAGCTATCCCGGTTGTCAGTCCCACAGTGGCCGTGCACAATTCCGGATCAGATCATaGGCGACAACCAACAGGTCC +
Preference number: 4 (lower is better)
Translates to: GLSNLSYPGCQSHSGRAQFRIRS*ATTNRS
Trigger: GGACCTGTTGGTTGTCGCCCATGATCTGATCCGGAA...TTGTGCACGGCCACTGTGGGACTGACAACCGGGATAGCTCAAGTTCGAGAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CCA 90 bp GTGGGAGGTGCTTGGATCACGGGGCAGGATCATCCCTCATGGCTTCGTGCCATCTACCGGGAGTGTAACTaGTGCTCCTTCTGGAAAACA +
Preference number: 4 (lower is better)
Translates to: VGGAWITGQDHPSWLRAIYRECN*CSFWKT
Trigger: TGTTTTCCAGAAGGAGCACCAGTTACACTCCCGGTA...GATGGCACGAAGCCATGAGGGATGATCCTGCCCCGTGATCCAAGCACCTCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405673.5
CDS-3UTR TCA 90 bp ACACCATGTGTTGGCAAGATACAGGAAATGGATACTCCCACACTCAGCCACTACGCTCTGCAGCCTCGATaGCGGCCTCGATGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: TPCVGKIQEMDTPTLSHYALQPR*RPRCSF
Trigger: GAAGCTGCATCGAGGCCGTCATCGAGGCTGCAGAGC...GTAGTGGCTGAGTGTGGGAGTATCCATTTCCTGTATCTTGCCAACACATGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405673.5
CDS-3UTR TCA 90 bp GGTCTCTCGAACTTGAGCTATCCCGGTTGTCAGTCCCACAGTGGCCGTGCACAACTTCTGCGTCTTGAGTaGCGTCTTTATACCCCGATG +
Preference number: 4 (lower is better)
Translates to: GLSNLSYPGCQSHSGRAQLLRLE*RLYTPM
Trigger: CATCGGGGTATAAAGACGTCACTCAAGACGCAGAAG...TTGTGCACGGCCACTGTGGGACTGACAACCGGGATAGCTCAAGTTCGAGAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR GCA 90 bp ACAGAAAGACTGGATATTACCCCAGAGAATAAAGACTTGCAAAGCCTGGAACTTTCTCGGGGAGGGGACTaGGCAGGCACGCGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: TERLDITPENKDLQSLELSRGGD*AGTRAG
Trigger: GCCAGCCCGCGTGCCTGCGCAGTCCCCTCCCCGAGA...AAGTTCCAGGCTTTGCAAGTCTTTATTCTCTGGGGTAATATCCAGTCTTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000216214.7
CDS-3UTR GCA 90 bp ACATGCCCATGTGGCTCTCTTGGTGTATGTGACGGTTTCGCAATCAGAGATCCATGCAGCACCTCCAGCTaGTCTGCAGCCTCGATGACG +
Preference number: 4 (lower is better)
Translates to: TCPCGSLGVCDGFAIRDPCSTSS*SAASMT
Trigger: CGTCATCGAGGCTGCAGAGCAGCTGGAGGTGCTGCA...TGGATCTCTGATTGCGAAACCGTCACATACACCAAGAGAGCCACATGGGCATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR GCA 90 bp GGTCTCTCGAACTTGAGCTATCCCGGTTGTCAGTCCCACAGTGGCCGTGCACAACTTCATGTGCCCTCTTaGCCATTCAAGGACCTTGGT +
Preference number: 4 (lower is better)
Translates to: GLSNLSYPGCQSHSGRAQLHVPS*PFKDLG
Trigger: ACCAAGGTCCTTGAATGGGCAAGAGGGCACATGAAG...TTGTGCACGGCCACTGTGGGACTGACAACCGGGATAGCTCAAGTTCGAGAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CCA 90 bp TTAATAACACCATGTGTTGGCAAGATACAGGAAATGGATACTCCCACACTCAGCGCGCCTCCGAGACGCTaGTCCCAGCTCGCGCTGCCA +
Preference number: 4 (lower is better)
Translates to: LITPCVGKIQEMDTPTLSAPPRR*SQLALP
Trigger: TGGCAGCGCGAGCTGGGACCAGCGTCTCGGAGGCGC...GCTGAGTGTGGGAGTATCCATTTCCTGTATCTTGCCAACACATGGTGTTATTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405673.5
CDS-3UTR CCA 90 bp ACGTGGAGTTCTCCATACATTCCTCTTCGTTTGGGCACTGTGGTTACAGAAGGCGGAAGAAGCTGGGCTTaGCATCGCCTGTGCGAGGTG +
Preference number: 4 (lower is better)
Translates to: TWSSPYIPLRLGTVVTEGGRSWA*HRLCEV
Trigger: CACCTCGCACAGGCGATGCCAAGCCCAGCTTCTTCC...GCCTTCTGTAACCACAGTGCCCAAACGAAGAGGAATGTATGGAGAACTCCACGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CCA 90 bp CACAGGGGAGCCCTCTCACCCAGCCTTGAGGGCCACATGCCCATGTGGCTCTCTCACATTGAAGATAAGTaGCCTCAAACTGAAACCAAG +
Preference number: 4 (lower is better)
Translates to: HRGALSPSLEGHMPMWLSHIEDK*PQTETK
Trigger: CTTGGTTTCAGTTTGAGGCCACTTATCTTCAATGTG...AGAGAGCCACATGGGCATGTGGCCCTCAAGGCTGGGTGAGAGGGCTCCCCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CCA 90 bp ACTGTAGGGCCGCTCATGCACCGCCACAGAAGCCTCTGCCGGGTCACAGTCAGACTTTATCTGTACCTATaGGAGTCATCAATGGGGAGT +
Preference number: 4 (lower is better)
Translates to: TVGPLMHRHRSLCRVTVRLYLYL*ESSMGS
Trigger: ACTCCCCATTGATGACTCCCATAGGTACAGATAAAG...TCTGACTGTGACCCGGCAGAGGCTTCTGTGGCGGTGCATGAGCGGCCCTACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CCA 90 bp CTCCTGCCTCAGCCTCCCAAGTTGCCAGTGTGCCACTTTCCATTATTACTTTTTTGTGATCCCCAGTGCTaGAGGTGGGGCCTGGTGGGA +
Preference number: 4 (lower is better)
Translates to: LLPQPPKLPVCHFPLLLFCDPQC*RWGLVG
Trigger: TCCCACCAGGCCCCACCTCCAGCACTGGGGATCACA...AAAAAGTAATAATGGAAAGTGGCACACTGGCAACTTGGGAGGCTGAGGCAGGAG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000405673.5
3UTR CAA 72 bp CGGATTCTGGTCCCTGAGGTAGCTATCCATCAGTCCTaGCAAAGTCCACCTGAAATGTGTCCGCGTCACCCT +
Preference number: 4 (lower is better)
Translates to: RILVPEVAIHQS*QSPPEMCPRHP
Trigger: AGGGTGACGCGGACACATTTCAGGTGGACTTTGCAAGGACTGATGGATAGCTACCTCAGGGACCAGAATCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR CAA 72 bp TTTGAAACCTGGTCTCTCGAACTTGAGCTATCCCGGTaGTCAGTCCCACAGTGGCCGTGCACAATGTTGGCC +
Preference number: 4 (lower is better)
Translates to: FETWSLELELSR*SVPQWPCTMLA
Trigger: GGCCAACATTGTGCACGGCCACTGTGGGACTGACAACCGGGATAGCTCAAGTTCGAGAGACCAGGTTTCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR TCA 90 bp GTCCACCTGAAATGTGTCCGCGTCACCCTCCTGCATAGTTCAACACACAGGGGATGCTGTTTGCAGATCTaGGTGGCAAGGTCTTGCACA +
Preference number: 4 (lower is better)
Translates to: VHLKCVRVTLLHSSTHRGCCLQI*VARSCT
Trigger: TGTGCAAGACCTTGCCACTCAGATCTGCAAACAGCA...TCCCCTGTGTGTTGAACTATGCAGGAGGGTGACGCGGACACATTTCAGGTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR TCA 90 bp TATTGGAAACTTCCTGAGGCCTCCCCGGAAGCAGATGCTGCTATGCTTCCTAGACAGGCTGGAGTACAGTaGTCTCAGCTCACTGCAACC +
Preference number: 4 (lower is better)
Translates to: YWKLPEASPEADAAMLPRQAGVQ*SQLTAT
Trigger: GGTTGCAGTGAGCTGAGATCACTGTACTCCAGCCTG...TCTAGGAAGCATAGCAGCATCTGCTTCCGGGGAGGCCTCAGGAAGTTTCCAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405673.5
CDS-3UTR GCA 90 bp CTCCTGCCTCAGCCTCCCAAGTTGCCAGTGTGCCACTTTCCATTATTACTTTTTAGGCTGAGGATCGACTaGAGCACCACAGGACTCCGG +
Preference number: 4 (lower is better)
Translates to: LLPQPPKLPVCHFPLLLFRLRID*STTGLR
Trigger: CCGGAGTCCTGTGGTGCTGCAGTCGATCCTCAGCCT...AAAAAGTAATAATGGAAAGTGGCACACTGGCAACTTGGGAGGCTGAGGCAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405673.5
CDS-3UTR GCA 90 bp ACATGCCCATGTGGCTCTCTTGGTGTATGTGACGGTTTCGCAATCAGAGATCCAGCCTTGAGGGCCACATaGCCATGTGGCTCTCTTGGT +
Preference number: 4 (lower is better)
Translates to: TCPCGSLGVCDGFAIRDPALRAT*PCGSLG
Trigger: ACCAAGAGAGCCACATGGGCATGTGGCCCTCAAGGC...TGGATCTCTGATTGCGAAACCGTCACATACACCAAGAGAGCCACATGGGCATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR GCA 90 bp ACGTGGAGTTCTCCATACATTCCTCTTCGTTTGGGCACTGTGGTTACAGAAGGCGTCCCACAGTGGCCGTaGACAATGTTGGCCTGGACT +
Preference number: 4 (lower is better)
Translates to: TWSSPYIPLRLGTVVTEGVPQWP*TMLAWT
Trigger: AGTCCAGGCCAACATTGTGCACGGCCACTGTGGGAC...GCCTTCTGTAACCACAGTGCCCAAACGAAGAGGAATGTATGGAGAACTCCACGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR GCA 90 bp ACACCATGTGTTGGCAAGATACAGGAAATGGATACTCCCACACTCAGCCACTACAACTGTGATCCCCAGTaGTGGAGGTGGGGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: TPCVGKIQEMDTPTLSHYNCDPQ*WRWGLV
Trigger: CACCAGGCCCCACCTCCAGCACTGGGGATCACAGTT...GTAGTGGCTGAGTGTGGGAGTATCCATTTCCTGTATCTTGCCAACACATGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405673.5
CDS-3UTR CCA 90 bp ACATGCCCATGTGGCTCTCTTGGTGTATGTGACGGTTTCGCAATCAGAGATCCACCTGCCCGCTTAAATTaGCCAGTCACCAGCCCTACC +
Preference number: 4 (lower is better)
Translates to: TCPCGSLGVCDGFAIRDPPARLN*PVTSPT
Trigger: GGTAGGGCTGGTGACTGGCCAATTTAAGCGGGCAGG...TGGATCTCTGATTGCGAAACCGTCACATACACCAAGAGAGCCACATGGGCATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216214.7
CDS-3UTR CCA 90 bp GCTGGAATAAGTGGCATGATCATAGCTCATTTCAGTCTGGAACTCCTGGGCTCAGGAAGAAGCTGGGCTTaGCATCGCCTGTGCGAGGTG +
Preference number: 4 (lower is better)
Translates to: AGISGMIIAHFSLELLGSGRSWA*HRLCEV
Trigger: CACCTCGCACAGGCGATGCCAAGCCCAGCTTCTTCC...TGAGCCCAGGAGTTCCAGACTGAAATGAGCTATGATCATGCCACTTATTCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405673.5
CDS-3UTR CCA 90 bp ACATGCCCATGTGGCTCTCTTGGTGTATGTGACGGTTTCGCAATCAGAGATCCAGTCTTTATACCCCGATaGGTCCAGCACCACCCCGCA +
Preference number: 4 (lower is better)
Translates to: TCPCGSLGVCDGFAIRDPVFIPR*VQHHPA
Trigger: TGCGGGGTGGTGCTGGACCCATCGGGGTATAAAGAC...TGGATCTCTGATTGCGAAACCGTCACATACACCAAGAGAGCCACATGGGCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CCA 90 bp GTCCACCTGAAATGTGTCCGCGTCACCCTCCTGCATAGTTCAACACACAGGGGATATGGGAGTCATCAATaGGGAGTGTCACAGGGCTTG +
Preference number: 4 (lower is better)
Translates to: VHLKCVRVTLLHSSTHRGYGSHQ*GVSQGL
Trigger: CAAGCCCTGTGACACTCCCCATTGATGACTCCCATA...TCCCCTGTGTGTTGAACTATGCAGGAGGGTGACGCGGACACATTTCAGGTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR TCA 90 bp ACAGAAAGACTGGATATTACCCCAGAGAATAAAGACTTGCAAAGCCTGGAACTTTCCCCAACCCAGACCTaGGGCTGGTCTCCGTCCCCC +
Preference number: 4 (lower is better)
Translates to: TERLDITPENKDLQSLELSPTQT*GWSPSP
Trigger: GGGGGACGGAGACCAGCCTCAGGTCTGGGTTGGGGA...AAGTTCCAGGCTTTGCAAGTCTTTATTCTCTGGGGTAATATCCAGTCTTTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216214.7
CDS-3UTR TCA 90 bp GCCTGTCAGATGGGAACGGGAACACCAGGTCCATCCCTTCCCACGGATTCTGGTCGTAGGATACAACTTTaGTTCCGTGCAGAAGCATAT +
Preference number: 4 (lower is better)
Translates to: ACQMGTGTPGPSLPTDSGRRIQL*FRAEAY
Trigger: ATATGCTTCTGCACGGAATCAAAGTTGTATCCTACG...ACCAGAATCCGTGGGAAGGGATGGACCTGGTGTTCCCGTTCCCATCTGACAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR TCA 90 bp CTATTCTCCTGCCTCAGCCTCCCAAGTTGCCAGTGTGCCACTTTCCATTATTACTTCACTGCTACAAAGTaGGAGCAGCTCCCAGGGCAC +
Preference number: 4 (lower is better)
Translates to: LFSCLSLPSCQCATFHYYFTATK*EQLPGH
Trigger: GTGCCCTGGGAGCTGCTCTCACTTTGTAGCAGTGAA...GTAATAATGGAAAGTGGCACACTGGCAACTTGGGAGGCTGAGGCAGGAGAATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405673.5
CDS-3UTR GCA 90 bp ACAGAAAGACTGGATATTACCCCAGAGAATAAAGACTTGCAAAGCCTGGAACTTGATTCCGGGGGCCACTaGTGCGCTGACGCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: TERLDITPENKDLQSLELDSGGH*CADASP
Trigger: GGGACTGGCGTCAGCGCAGCAGTGGCCCCCGGAATC...AAGTTCCAGGCTTTGCAAGTCTTTATTCTCTGGGGTAATATCCAGTCTTTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR GCA 90 bp ACATGCCCATGTGGCTCTCTTGGTGTATGTGACGGTTTCGCAATCAGAGATCCAACAGGACTCCGGATGTaGTGCTCCAGGTCGTCAAAC +
Preference number: 4 (lower is better)
Translates to: TCPCGSLGVCDGFAIRDPTGLRM*CSRSSN
Trigger: GTTTGACGACCTGGAGCAGCACATCCGGAGTCCTGT...TGGATCTCTGATTGCGAAACCGTCACATACACCAAGAGAGCCACATGGGCATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR GCA 90 bp CTATTCTCCTGCCTCAGCCTCCCAAGTTGCCAGTGTGCCACTTTCCATTATTACACAGGACTCCGGATGTaGTGCTCCAGGTCGTCAAAC +
Preference number: 4 (lower is better)
Translates to: LFSCLSLPSCQCATFHYYTGLRM*CSRSSN
Trigger: GTTTGACGACCTGGAGCAGCACATCCGGAGTCCTGT...GTAATAATGGAAAGTGGCACACTGGCAACTTGGGAGGCTGAGGCAGGAGAATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405673.5
CDS-3UTR GCA 90 bp TTAACTTTATCTGTACCTATGGGAGTCATCAATGGGGAGTGTCACAGGGCTTGGAGGCTGAGGATCGACTaGAGCACCACAGGACTCCGG +
Preference number: 4 (lower is better)
Translates to: LTLSVPMGVINGECHRAWRLRID*STTGLR
Trigger: CCGGAGTCCTGTGGTGCTGCAGTCGATCCTCAGCCT...CCAAGCCCTGTGACACTCCCCATTGATGACTCCCATAGGTACAGATAAAGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CCA 90 bp CTCCTGCCTCAGCCTCCCAAGTTGCCAGTGTGCCACTTTCCATTATTACTTTTTAGTCCTGGAAGAAGCTaGGCTTGGCATCGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: LLPQPPKLPVCHFPLLLFSPGRS*AWHRLC
Trigger: GCACAGGCGATGCCAAGCCCAGCTTCTTCCAGGACT...AAAAAGTAATAATGGAAAGTGGCACACTGGCAACTTGGGAGGCTGAGGCAGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405673.5
CDS-3UTR CCA 90 bp ACACCATGTGTTGGCAAGATACAGGAAATGGATACTCCCACACTCAGCCACTACGGTTGTCATAGTTGGTaGTCAGGACCATGGCGCCCC +
Preference number: 4 (lower is better)
Translates to: TPCVGKIQEMDTPTLSHYGCHSW*SGPWRP
Trigger: GGGGCGCCATGGTCCTGACCACCAACTATGACAACC...GTAGTGGCTGAGTGTGGGAGTATCCATTTCCTGTATCTTGCCAACACATGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405673.5
CDS-3UTR CCA 90 bp CTATTCTCCTGCCTCAGCCTCCCAAGTTGCCAGTGTGCCACTTTCCATTATTACGCAGGTTGTCATAGTTaGTGGTCAGGACCATGGCGC +
Preference number: 4 (lower is better)
Translates to: LFSCLSLPSCQCATFHYYAGCHS*WSGPWR
Trigger: GCGCCATGGTCCTGACCACCAACTATGACAACCTGC...GTAATAATGGAAAGTGGCACACTGGCAACTTGGGAGGCTGAGGCAGGAGAATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405673.5
CDS-3UTR CCA 90 bp GTCCACCTGAAATGTGTCCGCGTCACCCTCCTGCATAGTTCAACACACAGGGGAGCAGCTACTGTTGCTTaGACAGTCTTTACTCTTCCC +
Preference number: 4 (lower is better)
Translates to: VHLKCVRVTLLHSSTHRGAATVA*TVFTLP
Trigger: GGGAAGAGTAAAGACTGTCCAAGCAACAGTAGCTGC...TCCCCTGTGTGTTGAACTATGCAGGAGGGTGACGCGGACACATTTCAGGTGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CCA 90 bp GCCTGTCAGATGGGAACGGGAACACCAGGTCCATCCCTTCCCACGGATTCTGGTCTTTATCTGTACCTATaGGAGTCATCAATGGGGAGT +
Preference number: 4 (lower is better)
Translates to: ACQMGTGTPGPSLPTDSGLYLYL*ESSMGS
Trigger: ACTCCCCATTGATGACTCCCATAGGTACAGATAAAG...ACCAGAATCCGTGGGAAGGGATGGACCTGGTGTTCCCGTTCCCATCTGACAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR TCA 90 bp ACACCATGTGTTGGCAAGATACAGGAAATGGATACTCCCACACTCAGCCACTACATCGCCTGTGCGAGGTaGCATCTTCCGGATCAGATC +
Preference number: 4 (lower is better)
Translates to: TPCVGKIQEMDTPTLSHYIACAR*HLPDQI
Trigger: GATCTGATCCGGAAGATGTCACCTCGCACAGGCGAT...GTAGTGGCTGAGTGTGGGAGTATCCATTTCCTGTATCTTGCCAACACATGGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405673.5
CDS-3UTR TCA 90 bp GTCACCCAGGCTGGAATAAGTGGCATGATCATAGCTCATTTCAGTCTGGAACTCCTATTGGAAACTTCCTaGGGCCTCCCCGGAAGCAGA +
Preference number: 4 (lower is better)
Translates to: VTQAGISGMIIAHFSLELLLETS*GLPGSR
Trigger: TCTGCTTCCGGGGAGGCCTCAGGAAGTTTCCAATAG...GAGTTCCAGACTGAAATGAGCTATGATCATGCCACTTATTCCAGCCTGGGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405673.5
CDS-3UTR GCA 90 bp TTAACTTTATCTGTACCTATGGGAGTCATCAATGGGGAGTGTCACAGGGCTTGGCCACATGTTTGTGCGTaGGTGAGTGTCTTCCCCGCG +
Preference number: 4 (lower is better)
Translates to: LTLSVPMGVINGECHRAWPHVCA*VSVFPA
Trigger: CGCGGGGAAGACACTCACGCACGCACAAACATGTGG...CCAAGCCCTGTGACACTCCCCATTGATGACTCCCATAGGTACAGATAAAGTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216214.7
CDS-3UTR GCA 90 bp ATGCTTCCTAGACAGCTGTGGAACCGTGAGCCAATTACAGCTCTTTTCTTTATACACCTCCAGCTGCTCTaGAGCCTCGATGACGGCCTC +
Preference number: 4 (lower is better)
Translates to: MLPRQLWNREPITALFFIHLQLL*SLDDGL
Trigger: GAGGCCGTCATCGAGGCTGCAGAGCAGCTGGAGGTG...TATAAAGAAAAGAGCTGTAATTGGCTCACGGTTCCACAGCTGTCTAGGAAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405673.5
CDS-3UTR GCA 90 bp GTCCACCTGAAATGTGTCCGCGTCACCCTCCTGCATAGTTCAACACACAGGGGAACAGAAAGGACTTGGTaGGGTATAAGTTCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: VHLKCVRVTLLHSSTHRGTERTW*GISSGG
Trigger: TCCTCCAGAACTTATACCGCACCAAGTCCTTTCTGT...TCCCCTGTGTGTTGAACTATGCAGGAGGGTGACGCGGACACATTTCAGGTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR GCA 90 bp TTATCTGTACCTATGGGAGTCATCAATGGGGAGTGTCACAGGGCTTGGCAAGAATCCGCGTCACCCTCCTaGATAGTTCAACACACAGGG +
Preference number: 4 (lower is better)
Translates to: LSVPMGVINGECHRAWQESASPS*IVQHTG
Trigger: CCCTGTGTGTTGAACTATGCAGGAGGGTGACGCGGA...TTCTTGCCAAGCCCTGTGACACTCCCCATTGATGACTCCCATAGGTACAGATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CCA 90 bp TTAACTTTATCTGTACCTATGGGAGTCATCAATGGGGAGTGTCACAGGGCTTGGAGTCCTGGAAGAAGCTaGGCTTGGCATCGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: LTLSVPMGVINGECHRAWSPGRS*AWHRLC
Trigger: GCACAGGCGATGCCAAGCCCAGCTTCTTCCAGGACT...CCAAGCCCTGTGACACTCCCCATTGATGACTCCCATAGGTACAGATAAAGTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CCA 90 bp CTCCTGCCTCAGCCTCCCAAGTTGCCAGTGTGCCACTTTCCATTATTACTTTTTTCCATCAGGCAGTCCTaGAAGAAGCTGGGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: LLPQPPKLPVCHFPLLLFSIRQS*KKLGLA
Trigger: TGCCAAGCCCAGCTTCTTCCAGGACTGCCTGATGGA...AAAAAGTAATAATGGAAAGTGGCACACTGGCAACTTGGGAGGCTGAGGCAGGAG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000405673.5
CDS-3UTR CCA 90 bp TCTTTGGCAGCTACTGTTGCTTGGACAGTCTTTACTCTTCCCCTTTTATTACGATGGTGGTCAGGACCATaGCGCCCCTGTCCATCAGGC +
Preference number: 4 (lower is better)
Translates to: SLAATVAWTVFTLPLLLRWWSGP*RPCPSG
Trigger: GCCTGATGGACAGGGGCGCCATGGTCCTGACCACCA...TCGTAATAAAAGGGGAAGAGTAAAGACTGTCCAAGCAACAGTAGCTGCCAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CCA 90 bp ATGCTTCCTAGACAGCTGTGGAACCGTGAGCCAATTACAGCTCTTTTCTTTATATGGTGGTCAGGACCATaGCGCCCCTGTCCATCAGGC +
Preference number: 4 (lower is better)
Translates to: MLPRQLWNREPITALFFIWWSGP*RPCPSG
Trigger: GCCTGATGGACAGGGGCGCCATGGTCCTGACCACCA...TATAAAGAAAAGAGCTGTAATTGGCTCACGGTTCCACAGCTGTCTAGGAAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405673.5
CDS-3UTR CCA 90 bp GGTCTCTCGAACTTGAGCTATCCCGGTTGTCAGTCCCACAGTGGCCGTGCACAAAATCAGAGATCCACGTaGAGTTCTCCATACATTCCT +
Preference number: 4 (lower is better)
Translates to: GLSNLSYPGCQSHSGRAQNQRST*SSPYIP
Trigger: AGGAATGTATGGAGAACTCCACGTGGATCTCTGATT...TTGTGCACGGCCACTGTGGGACTGACAACCGGGATAGCTCAAGTTCGAGAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CCA 90 bp GCCTGTCAGATGGGAACGGGAACACCAGGTCCATCCCTTCCCACGGATTCTGGTCACATTGAAGATAAGTaGCCTCAAACTGAAACCAAG +
Preference number: 4 (lower is better)
Translates to: ACQMGTGTPGPSLPTDSGHIEDK*PQTETK
Trigger: CTTGGTTTCAGTTTGAGGCCACTTATCTTCAATGTG...ACCAGAATCCGTGGGAAGGGATGGACCTGGTGTTCCCGTTCCCATCTGACAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
3UTR CAA 72 bp GATAAGTGGCCTCAAACTGAAACCAAGCAGGGCTGTTaGTTTCCAAAGAGAACCCTCCACTGTAGGGCCGCT +
Preference number: 4 (lower is better)
Translates to: DKWPQTETKQGC*FPKRTLHCRAA
Trigger: AGCGGCCCTACAGTGGAGGGTTCTCTTTGGAAACAAACAGCCCTGCTTGGTTTCAGTTTGAGGCCACTTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR GCA 90 bp ACATGCCCATGTGGCTCTCTTGGTGTATGTGACGGTTTCGCAATCAGAGATCCACTGGGCTTTGCTGTTTaGAGATCTGAGTGGCAAGGT +
Preference number: 4 (lower is better)
Translates to: TCPCGSLGVCDGFAIRDPLGFAV*RSEWQG
Trigger: ACCTTGCCACTCAGATCTGCAAACAGCAAAGCCCAG...TGGATCTCTGATTGCGAAACCGTCACATACACCAAGAGAGCCACATGGGCATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR GCA 90 bp GTCCACCTGAAATGTGTCCGCGTCACCCTCCTGCATAGTTCAACACACAGGGGATTTGGCAGCTACTGTTaGTTGGACAGTCTTTACTCT +
Preference number: 4 (lower is better)
Translates to: VHLKCVRVTLLHSSTHRGFGSYC*LDSLYS
Trigger: AGAGTAAAGACTGTCCAAGCAACAGTAGCTGCCAAA...TCCCCTGTGTGTTGAACTATGCAGGAGGGTGACGCGGACACATTTCAGGTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR GCA 90 bp GTGGGAGGTGCTTGGATCACGGGGCAGGATCATCCCTCATGGCTTCGTGCCATCTTATTAGTAATTCACTaGTACAAAGTGAGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: VGGAWITGQDHPSWLRAILLVIH*YKVRAA
Trigger: AGCTGCTCTCACTTTGTAGCAGTGAATTACTAATAA...GATGGCACGAAGCCATGAGGGATGATCCTGCCCCGTGATCCAAGCACCTCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405673.5
CDS-3UTR GCA 90 bp GTCACCCAGGCTGGAATAAGTGGCATGATCATAGCTCATTTCAGTCTGGAACTCTGCCTGCTCCCACTCTaGCTTCTGCCACTATTGGAA +
Preference number: 4 (lower is better)
Translates to: VTQAGISGMIIAHFSLELCLLPL*LLPLLE
Trigger: TTCCAATAGTGGCAGAAGGCAGAGTGGGAGCAGGCA...GAGTTCCAGACTGAAATGAGCTATGATCATGCCACTTATTCCAGCCTGGGTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405673.5
CDS-3UTR CCA 90 bp GTCACCCAGGCTGGAATAAGTGGCATGATCATAGCTCATTTCAGTCTGGAACTCTTCCGGATCAGATCATaGGCGACAACCAACAGGTCC +
Preference number: 4 (lower is better)
Translates to: VTQAGISGMIIAHFSLELFRIRS*ATTNRS
Trigger: GGACCTGTTGGTTGTCGCCCATGATCTGATCCGGAA...GAGTTCCAGACTGAAATGAGCTATGATCATGCCACTTATTCCAGCCTGGGTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405673.5
CDS-3UTR CCA 90 bp TTAACTTTATCTGTACCTATGGGAGTCATCAATGGGGAGTGTCACAGGGCTTGGGCAGGTTGTCATAGTTaGTGGTCAGGACCATGGCGC +
Preference number: 4 (lower is better)
Translates to: LTLSVPMGVINGECHRAWAGCHS*WSGPWR
Trigger: GCGCCATGGTCCTGACCACCAACTATGACAACCTGC...CCAAGCCCTGTGACACTCCCCATTGATGACTCCCATAGGTACAGATAAAGTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CCA 90 bp CTGCCTTCTGCCACTATTGGAAACTTCCTGAGGCCTCCCCGGAAGCAGATGCTGCTAACTGATATAGTCTaGACATTTGTCCCCACGAAA +
Preference number: 4 (lower is better)
Translates to: LPSATIGNFLRPPRKQMLLTDIV*TFVPTK
Trigger: TTTCGTGGGGACAAATGTCCAGACTATATCAGTTAG...CAGCATCTGCTTCCGGGGAGGCCTCAGGAAGTTTCCAATAGTGGCAGAAGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405673.5
CDS-3UTR CCA 90 bp TATTGGAAACTTCCTGAGGCCTCCCCGGAAGCAGATGCTGCTATGCTTCCTAGAGCAAGATACAGGAAATaGATACTCCCACACTCAGCC +
Preference number: 4 (lower is better)
Translates to: YWKLPEASPEADAAMLPRARYRK*ILPHSA
Trigger: GGCTGAGTGTGGGAGTATCCATTTCCTGTATCTTGC...TCTAGGAAGCATAGCAGCATCTGCTTCCGGGGAGGCCTCAGGAAGTTTCCAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405673.5
CDS-3UTR TCA 90 bp ACAGAAAGACTGGATATTACCCCAGAGAATAAAGACTTGCAAAGCCTGGAACTTCCCTGTCCATCAGGCTaGGGATCGACTGCAGCACCA +
Preference number: 4 (lower is better)
Translates to: TERLDITPENKDLQSLELPCPSG*GSTAAP
Trigger: TGGTGCTGCAGTCGATCCTCAGCCTGATGGACAGGG...AAGTTCCAGGCTTTGCAAGTCTTTATTCTCTGGGGTAATATCCAGTCTTTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR TCA 90 bp TTAACTTTATCTGTACCTATGGGAGTCATCAATGGGGAGTGTCACAGGGCTTGGACGGATTCTGGTCCCTaGGGTAGCTATCCATCAGTC +
Preference number: 4 (lower is better)
Translates to: LTLSVPMGVINGECHRAWTDSGP*GSYPSV
Trigger: GACTGATGGATAGCTACCTCAGGGACCAGAATCCGT...CCAAGCCCTGTGACACTCCCCATTGATGACTCCCATAGGTACAGATAAAGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR TCA 90 bp CTGCCTTCTGCCACTATTGGAAACTTCCTGAGGCCTCCCCGGAAGCAGATGCTGGTGACAGTGACTTCTTaGGAAATCTGGTCATTTAAA +
Preference number: 4 (lower is better)
Translates to: LPSATIGNFLRPPRKQMLVTVTS*EIWSFK
Trigger: TTTAAATGACCAGATTTCTCAAGAAGTCACTGTCAC...CAGCATCTGCTTCCGGGGAGGCCTCAGGAAGTTTCCAATAGTGGCAGAAGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405673.5
CDS-3UTR GCA 90 bp TCTTTGGCAGCTACTGTTGCTTGGACAGTCTTTACTCTTCCCCTTTTATTACGACCCCCAGCAGACTCCTaGCCGCTTAAATTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: SLAATVAWTVFTLPLLLRPPADS*PLKLAS
Trigger: ACTGGCCAATTTAAGCGGGCAGGAGTCTGCTGGGGG...TCGTAATAAAAGGGGAAGAGTAAAGACTGTCCAAGCAACAGTAGCTGCCAAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000216214.7
CDS-3UTR GCA 90 bp TTATCTGTACCTATGGGAGTCATCAATGGGGAGTGTCACAGGGCTTGGCAAGAATTTGCAACTGCATCCTaGACCACACTTAGGCACAGC +
Preference number: 4 (lower is better)
Translates to: LSVPMGVINGECHRAWQEFATAS*TTLRHS
Trigger: GCTGTGCCTAAGTGTGGTGCAGGATGCAGTTGCAAA...TTCTTGCCAAGCCCTGTGACACTCCCCATTGATGACTCCCATAGGTACAGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216214.7
CDS-3UTR GCA 90 bp ATGCTTCCTAGACAGCTGTGGAACCGTGAGCCAATTACAGCTCTTTTCTTTATAGGACTCCGGATGTGCTaGTCCAGGTCGTCAAACACC +
Preference number: 4 (lower is better)
Translates to: MLPRQLWNREPITALFFIGLRMC*SRSSNT
Trigger: GGTGTTTGACGACCTGGAGCAGCACATCCGGAGTCC...TATAAAGAAAAGAGCTGTAATTGGCTCACGGTTCCACAGCTGTCTAGGAAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405673.5
CDS-3UTR GCA 90 bp ACGTGGAGTTCTCCATACATTCCTCTTCGTTTGGGCACTGTGGTTACAGAAGGCTACCCAATAATGTGGTaGTGTCCACGCGATCAGCAT +
Preference number: 4 (lower is better)
Translates to: TWSSPYIPLRLGTVVTEGYPIMW*CPRDQH
Trigger: ATGCTGATCGCGTGGACAGCACCACATTATTGGGTA...GCCTTCTGTAACCACAGTGCCCAAACGAAGAGGAATGTATGGAGAACTCCACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR GCA 90 bp ACGTGGAGTTCTCCATACATTCCTCTTCGTTTGGGCACTGTGGTTACAGAAGGCGCCCTTTTCAAGTTTTaGCTCCCTCACTCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: TWSSPYIPLRLGTVVTEGALFKF*LPHSLQ
Trigger: TTGCAGAGAGTGAGGGAGGCAAAACTTGAAAAGGGC...GCCTTCTGTAACCACAGTGCCCAAACGAAGAGGAATGTATGGAGAACTCCACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CCA 90 bp ATGCTTCCTAGACAGCTGTGGAACCGTGAGCCAATTACAGCTCTTTTCTTTATAACCAGGAGCAGTTCCTaGGGCTGTTTCCGGATGAGG +
Preference number: 4 (lower is better)
Translates to: MLPRQLWNREPITALFFITRSSS*GCFRMR
Trigger: CCTCATCCGGAAACAGCCCCAGGAACTGCTCCTGGT...TATAAAGAAAAGAGCTGTAATTGGCTCACGGTTCCACAGCTGTCTAGGAAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405673.5
CDS-3UTR CCA 90 bp TTATCTGTACCTATGGGAGTCATCAATGGGGAGTGTCACAGGGCTTGGCAAGAACACGCGATCAGCATCTaGGCTTTGCTGTTTGCAGAT +
Preference number: 4 (lower is better)
Translates to: LSVPMGVINGECHRAWQEHAISI*ALLFAD
Trigger: ATCTGCAAACAGCAAAGCCCAGATGCTGATCGCGTG...TTCTTGCCAAGCCCTGTGACACTCCCCATTGATGACTCCCATAGGTACAGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CCA 90 bp ACGTGGAGTTCTCCATACATTCCTCTTCGTTTGGGCACTGTGGTTACAGAAGGCCATTACCCAATAATGTaGTGCTGTCCACGCGATCAG +
Preference number: 4 (lower is better)
Translates to: TWSSPYIPLRLGTVVTEGHYPIM*CCPRDQ
Trigger: CTGATCGCGTGGACAGCACCACATTATTGGGTAATG...GCCTTCTGTAACCACAGTGCCCAAACGAAGAGGAATGTATGGAGAACTCCACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CCA 90 bp TTAACTTTATCTGTACCTATGGGAGTCATCAATGGGGAGTGTCACAGGGCTTGGTGCACAATGTTGGCCTaGACTGAAAAGGGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: LTLSVPMGVINGECHRAWCTMLA*TEKGLW
Trigger: CCAGAGGCCCTTTTCAGTCCAGGCCAACATTGTGCA...CCAAGCCCTGTGACACTCCCCATTGATGACTCCCATAGGTACAGATAAAGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR TCA 90 bp TTAACTTTATCTGTACCTATGGGAGTCATCAATGGGGAGTGTCACAGGGCTTGGTGCTGTTTGCAGATCTaGGTGGCAAGGTCTTGCACA +
Preference number: 4 (lower is better)
Translates to: LTLSVPMGVINGECHRAWCCLQI*VARSCT
Trigger: TGTGCAAGACCTTGCCACTCAGATCTGCAAACAGCA...CCAAGCCCTGTGACACTCCCCATTGATGACTCCCATAGGTACAGATAAAGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR TCA 90 bp TTATCTGTACCTATGGGAGTCATCAATGGGGAGTGTCACAGGGCTTGGCAAGAACTCTCTTGGTGTATGTaGCGGTTTCGCAATCAGAGA +
Preference number: 4 (lower is better)
Translates to: LSVPMGVINGECHRAWQELSWCM*RFRNQR
Trigger: TCTCTGATTGCGAAACCGTCACATACACCAAGAGAG...TTCTTGCCAAGCCCTGTGACACTCCCCATTGATGACTCCCATAGGTACAGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR TCA 90 bp ACGTGGAGTTCTCCATACATTCCTCTTCGTTTGGGCACTGTGGTTACAGAAGGCCGAAAAATACCACCTTaGCAAAAGAGAGCCTGTCAG +
Preference number: 4 (lower is better)
Translates to: TWSSPYIPLRLGTVVTEGRKIPP*QKRACQ
Trigger: CTGACAGGCTCTCTTTTGTCAAGGTGGTATTTTTCG...GCCTTCTGTAACCACAGTGCCCAAACGAAGAGGAATGTATGGAGAACTCCACGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR GCA 90 bp TTAACTTTATCTGTACCTATGGGAGTCATCAATGGGGAGTGTCACAGGGCTTGGCTTCATGTGCCCTCTTaGCCATTCAAGGACCTTGGT +
Preference number: 4 (lower is better)
Translates to: LTLSVPMGVINGECHRAWLHVPS*PFKDLG
Trigger: ACCAAGGTCCTTGAATGGGCAAGAGGGCACATGAAG...CCAAGCCCTGTGACACTCCCCATTGATGACTCCCATAGGTACAGATAAAGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR GCA 90 bp ACACCATGTGTTGGCAAGATACAGGAAATGGATACTCCCACACTCAGCCACTACAAGCAGATGCTGCTATaGTTCCTAGACAGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: TPCVGKIQEMDTPTLSHYKQMLL*FLDSCG
Trigger: TCCACAGCTGTCTAGGAAGCATAGCAGCATCTGCTT...GTAGTGGCTGAGTGTGGGAGTATCCATTTCCTGTATCTTGCCAACACATGGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405673.5
CDS-3UTR GCA 90 bp GTCACCCAGGCTGGAATAAGTGGCATGATCATAGCTCATTTCAGTCTGGAACTCTCCCACTCTGCCTTCTaGCACTATTGGAAACTTCCT +
Preference number: 4 (lower is better)
Translates to: VTQAGISGMIIAHFSLELSHSAF*HYWKLP
Trigger: AGGAAGTTTCCAATAGTGGCAGAAGGCAGAGTGGGA...GAGTTCCAGACTGAAATGAGCTATGATCATGCCACTTATTCCAGCCTGGGTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405673.5
CDS-3UTR CCA 90 bp ACAGAAAGACTGGATATTACCCCAGAGAATAAAGACTTGCAAAGCCTGGAACTTACCAGGAGCAGTTCCTaGGGCTGTTTCCGGATGAGG +
Preference number: 4 (lower is better)
Translates to: TERLDITPENKDLQSLELTRSSS*GCFRMR
Trigger: CCTCATCCGGAAACAGCCCCAGGAACTGCTCCTGGT...AAGTTCCAGGCTTTGCAAGTCTTTATTCTCTGGGGTAATATCCAGTCTTTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CCA 90 bp ACGTGGAGTTCTCCATACATTCCTCTTCGTTTGGGCACTGTGGTTACAGAAGGCGTGCGGTATAAGTTCTaGAGGACTTCCATGACTTCT +
Preference number: 4 (lower is better)
Translates to: TWSSPYIPLRLGTVVTEGVRYKF*RTSMTS
Trigger: AGAAGTCATGGAAGTCCTCCAGAACTTATACCGCAC...GCCTTCTGTAACCACAGTGCCCAAACGAAGAGGAATGTATGGAGAACTCCACGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CCA 90 bp ACATGCCCATGTGGCTCTCTTGGTGTATGTGACGGTTTCGCAATCAGAGATCCAGTTTGCAGATCTGAGTaGCAAGGTCTTGCACATATC +
Preference number: 4 (lower is better)
Translates to: TCPCGSLGVCDGFAIRDPVCRSE*QGLAHI
Trigger: GATATGTGCAAGACCTTGCCACTCAGATCTGCAAAC...TGGATCTCTGATTGCGAAACCGTCACATACACCAAGAGAGCCACATGGGCATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR TCA 90 bp ACGTGGAGTTCTCCATACATTCCTCTTCGTTTGGGCACTGTGGTTACAGAAGGCCGTAGGATACAACTTTaGTTCCGTGCAGAAGCATAT +
Preference number: 4 (lower is better)
Translates to: TWSSPYIPLRLGTVVTEGRRIQL*FRAEAY
Trigger: ATATGCTTCTGCACGGAATCAAAGTTGTATCCTACG...GCCTTCTGTAACCACAGTGCCCAAACGAAGAGGAATGTATGGAGAACTCCACGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR GCA 90 bp CTGGATATTACCCCAGAGAATAAAGACTTGCAAAGCCTGGAACTTATAATGTTTAGGCTGAGGATCGACTaGAGCACCACAGGACTCCGG +
Preference number: 4 (lower is better)
Translates to: LDITPENKDLQSLELIMFRLRID*STTGLR
Trigger: CCGGAGTCCTGTGGTGCTGCAGTCGATCCTCAGCCT...AAACATTATAAGTTCCAGGCTTTGCAAGTCTTTATTCTCTGGGGTAATATCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR GCA 90 bp ACGTGGAGTTCTCCATACATTCCTCTTCGTTTGGGCACTGTGGTTACAGAAGGCCTATCCATCAGTCCTTaGAAAGTCCACCTGAAATGT +
Preference number: 4 (lower is better)
Translates to: TWSSPYIPLRLGTVVTEGLSISP*KVHLKC
Trigger: ACATTTCAGGTGGACTTTGCAAGGACTGATGGATAG...GCCTTCTGTAACCACAGTGCCCAAACGAAGAGGAATGTATGGAGAACTCCACGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR GCA 90 bp ACGTGGAGTTCTCCATACATTCCTCTTCGTTTGGGCACTGTGGTTACAGAAGGCAAAATGTGTTTATTTTaGTGGGCGCAGTGGCTCATG +
Preference number: 4 (lower is better)
Translates to: TWSSPYIPLRLGTVVTEGKMCLF*WAQWLM
Trigger: CATGAGCCACTGCGCCCAGCAAAATAAACACATTTT...GCCTTCTGTAACCACAGTGCCCAAACGAAGAGGAATGTATGGAGAACTCCACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR GCA 90 bp GTCACCCAGGCTGGAATAAGTGGCATGATCATAGCTCATTTCAGTCTGGAACTCCGGGAGTGTAACTGGTaGTCCTTCTGGAAAACAATT +
Preference number: 4 (lower is better)
Translates to: VTQAGISGMIIAHFSLELRECNW*SFWKTI
Trigger: AATTGTTTTCCAGAAGGAGCACCAGTTACACTCCCG...GAGTTCCAGACTGAAATGAGCTATGATCATGCCACTTATTCCAGCCTGGGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405673.5
CDS-3UTR CCA 90 bp AAAGACTTGCAAAGCCTGGAACTTATAATGTTTGAAACCTGGTCTCTCGAACTTAGTCCTGGAAGAAGCTaGGCTTGGCATCGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: KDLQSLELIMFETWSLELSPGRS*AWHRLC
Trigger: GCACAGGCGATGCCAAGCCCAGCTTCTTCCAGGACT...AAGTTCGAGAGACCAGGTTTCAAACATTATAAGTTCCAGGCTTTGCAAGTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CCA 90 bp ACATGCCCATGTGGCTCTCTTGGTGTATGTGACGGTTTCGCAATCAGAGATCCAGTCTTGCACATATCCTaGAAAGTGGTCAAAACAGTC +
Preference number: 4 (lower is better)
Translates to: TCPCGSLGVCDGFAIRDPVLHIS*KVVKTV
Trigger: GACTGTTTTGACCACTTTCCAGGATATGTGCAAGAC...TGGATCTCTGATTGCGAAACCGTCACATACACCAAGAGAGCCACATGGGCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CCA 90 bp ACATGCCCATGTGGCTCTCTTGGTGTATGTGACGGTTTCGCAATCAGAGATCCAAATCAGAGATCCACGTaGAGTTCTCCATACATTCCT +
Preference number: 4 (lower is better)
Translates to: TCPCGSLGVCDGFAIRDPNQRST*SSPYIP
Trigger: AGGAATGTATGGAGAACTCCACGTGGATCTCTGATT...TGGATCTCTGATTGCGAAACCGTCACATACACCAAGAGAGCCACATGGGCATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CCA 90 bp ACAGAAAGACTGGATATTACCCCAGAGAATAAAGACTTGCAAAGCCTGGAACTTTTGTCAGTCCCACAGTaGCCGTGCACAATGTTGGCC +
Preference number: 4 (lower is better)
Translates to: TERLDITPENKDLQSLELLSVPQ*PCTMLA
Trigger: GGCCAACATTGTGCACGGCCACTGTGGGACTGACAA...AAGTTCCAGGCTTTGCAAGTCTTTATTCTCTGGGGTAATATCCAGTCTTTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CCA 90 bp ATGCTTCCTAGACAGCTGTGGAACCGTGAGCCAATTACAGCTCTTTTCTTTATACAGGATCATCCCTCATaGCTTCGTGCCATCTTCGTG +
Preference number: 4 (lower is better)
Translates to: MLPRQLWNREPITALFFIQDHPS*LRAIFV
Trigger: CACGAAGATGGCACGAAGCCATGAGGGATGATCCTG...TATAAAGAAAAGAGCTGTAATTGGCTCACGGTTCCACAGCTGTCTAGGAAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405673.5
3UTR CAA 72 bp CGTTTCATGTGGGTGAACCTGAGAAGGTTTAAAGTGTaGCAGGCCCTTTTCAAGTTTTGCCTCCCTCACTCT +
Preference number: 4 (lower is better)
Translates to: RFMWVNLRRFKV*QALFKFCLPHS
Trigger: AGAGTGAGGGAGGCAAAACTTGAAAAGGGCCTGCAACACTTTAAACCTTCTCAGGTTCACCCACATGAAACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR TCA 90 bp ACATGCCCATGTGGCTCTCTTGGTGTATGTGACGGTTTCGCAATCAGAGATCCAAGAAGCATATCTGCCTaGTGCTTAAAGAAATGGTCT +
Preference number: 4 (lower is better)
Translates to: TCPCGSLGVCDGFAIRDPRSISA*CLKKWS
Trigger: AGACCATTTCTTTAAGCATCAGGCAGATATGCTTCT...TGGATCTCTGATTGCGAAACCGTCACATACACCAAGAGAGCCACATGGGCATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR GCA 90 bp AAAGACTTGCAAAGCCTGGAACTTATAATGTTTGAAACCTGGTCTCTCGAACTTTCGGAAGCGCTCCTTTaGAACTGCATCCTGCACCAC +
Preference number: 4 (lower is better)
Translates to: KDLQSLELIMFETWSLELSEALL*NCILHH
Trigger: GTGGTGCAGGATGCAGTTGCAAAGGAGCGCTTCCGA...AAGTTCGAGAGACCAGGTTTCAAACATTATAAGTTCCAGGCTTTGCAAGTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216214.7
CDS-3UTR GCA 90 bp ACAGAAAGACTGGATATTACCCCAGAGAATAAAGACTTGCAAAGCCTGGAACTTACGCCGTACTTCATGTaGCCTCTTGCCCATTCAAGG +
Preference number: 4 (lower is better)
Translates to: TERLDITPENKDLQSLELTPYFM*PLAHSR
Trigger: CCTTGAATGGGCAAGAGGGCACATGAAGTACGGCGT...AAGTTCCAGGCTTTGCAAGTCTTTATTCTCTGGGGTAATATCCAGTCTTTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR GCA 90 bp TTAACTTTATCTGTACCTATGGGAGTCATCAATGGGGAGTGTCACAGGGCTTGGGACTTCCATGACTTCTaGGTCTTGAGTGACGTCTTT +
Preference number: 4 (lower is better)
Translates to: LTLSVPMGVINGECHRAWDFHDF*VLSDVF
Trigger: AAAGACGTCACTCAAGACGCAGAAGTCATGGAAGTC...CCAAGCCCTGTGACACTCCCCATTGATGACTCCCATAGGTACAGATAAAGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR GCA 90 bp AAAGACTTGCAAAGCCTGGAACTTATAATGTTTGAAACCTGGTCTCTCGAACTTTCCGCGTCACCCTCCTaGATAGTTCAACACACAGGG +
Preference number: 4 (lower is better)
Translates to: KDLQSLELIMFETWSLELSASPS*IVQHTG
Trigger: CCCTGTGTGTTGAACTATGCAGGAGGGTGACGCGGA...AAGTTCGAGAGACCAGGTTTCAAACATTATAAGTTCCAGGCTTTGCAAGTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CCA 90 bp AAAGACTTGCAAAGCCTGGAACTTATAATGTTTGAAACCTGGTCTCTCGAACTTAGGTACGCTTGTGACTaGCTCCCACTTCCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: KDLQSLELIMFETWSLELRYACD*LPLPLR
Trigger: TCTCAGGGGAAGTGGGAGCCAGTCACAAGCGTACCT...AAGTTCGAGAGACCAGGTTTCAAACATTATAAGTTCCAGGCTTTGCAAGTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216214.7
CDS-3UTR CCA 90 bp AAAGACTTGCAAAGCCTGGAACTTATAATGTTTGAAACCTGGTCTCTCGAACTTGCAGGTTGTCATAGTTaGTGGTCAGGACCATGGCGC +
Preference number: 4 (lower is better)
Translates to: KDLQSLELIMFETWSLELAGCHS*WSGPWR
Trigger: GCGCCATGGTCCTGACCACCAACTATGACAACCTGC...AAGTTCGAGAGACCAGGTTTCAAACATTATAAGTTCCAGGCTTTGCAAGTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CCA 90 bp TCTTTGGCAGCTACTGTTGCTTGGACAGTCTTTACTCTTCCCCTTTTATTACGACACGCGATCAGCATCTaGGCTTTGCTGTTTGCAGAT +
Preference number: 4 (lower is better)
Translates to: SLAATVAWTVFTLPLLLRHAISI*ALLFAD
Trigger: ATCTGCAAACAGCAAAGCCCAGATGCTGATCGCGTG...TCGTAATAAAAGGGGAAGAGTAAAGACTGTCCAAGCAACAGTAGCTGCCAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CCA 90 bp AAAGACTTGCAAAGCCTGGAACTTATAATGTTTGAAACCTGGTCTCTCGAACTTTTGTCAGTCCCACAGTaGCCGTGCACAATGTTGGCC +
Preference number: 4 (lower is better)
Translates to: KDLQSLELIMFETWSLELLSVPQ*PCTMLA
Trigger: GGCCAACATTGTGCACGGCCACTGTGGGACTGACAA...AAGTTCGAGAGACCAGGTTTCAAACATTATAAGTTCCAGGCTTTGCAAGTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CCA 90 bp AATAACACCATGTGTTGGCAAGATACAGGAAATGGATACTCCCACACTCAGCCACTCTGTCACCCAGGCTaGAATAAGTGGCATGATCAT +
Preference number: 4 (lower is better)
Translates to: NNTMCWQDTGNGYSHTQPLCHPG*NKWHDH
Trigger: ATGATCATGCCACTTATTCCAGCCTGGGTGACAGAG...TGGCTGAGTGTGGGAGTATCCATTTCCTGTATCTTGCCAACACATGGTGTTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405673.5
CDS-3UTR TCA 90 bp TCTTTGGCAGCTACTGTTGCTTGGACAGTCTTTACTCTTCCCCTTTTATTACGAATGACTTCTGCGTCTTaGGTGACGTCTTTATACCCC +
Preference number: 4 (lower is better)
Translates to: SLAATVAWTVFTLPLLLRMTSAS*VTSLYP
Trigger: GGGGTATAAAGACGTCACTCAAGACGCAGAAGTCAT...TCGTAATAAAAGGGGAAGAGTAAAGACTGTCCAAGCAACAGTAGCTGCCAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR TCA 90 bp CTGGATATTACCCCAGAGAATAAAGACTTGCAAAGCCTGGAACTTATAATGTTTAGGGCCTGGAATATCTaGTCACGAAGGGTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: LDITPENKDLQSLELIMFRAWNI*SRRVSP
Trigger: TGGGGAGACCCTTCGTGATCAGATATTCCAGGCCCT...AAACATTATAAGTTCCAGGCTTTGCAAGTCTTTATTCTCTGGGGTAATATCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR GCA 90 bp TTATCTGTACCTATGGGAGTCATCAATGGGGAGTGTCACAGGGCTTGGCAAGAAGTGCAGAAGCATATCTaGCTGATGCTTAAAGAAATG +
Preference number: 4 (lower is better)
Translates to: LSVPMGVINGECHRAWQEVQKHI*LMLKEM
Trigger: CATTTCTTTAAGCATCAGGCAGATATGCTTCTGCAC...TTCTTGCCAAGCCCTGTGACACTCCCCATTGATGACTCCCATAGGTACAGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CCA 90 bp CTGGATATTACCCCAGAGAATAAAGACTTGCAAAGCCTGGAACTTATAATGTTTTCCATCAGGCAGTCCTaGAAGAAGCTGGGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: LDITPENKDLQSLELIMFSIRQS*KKLGLA
Trigger: TGCCAAGCCCAGCTTCTTCCAGGACTGCCTGATGGA...AAACATTATAAGTTCCAGGCTTTGCAAGTCTTTATTCTCTGGGGTAATATCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CCA 90 bp TTAACTTTATCTGTACCTATGGGAGTCATCAATGGGGAGTGTCACAGGGCTTGGCAAACAGAAAGGACTTaGTGCGGTATAAGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: LTLSVPMGVINGECHRAWQTERT*CGISSG
Trigger: TCCAGAACTTATACCGCACCAAGTCCTTTCTGTTTG...CCAAGCCCTGTGACACTCCCCATTGATGACTCCCATAGGTACAGATAAAGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CCA 90 bp TTAACTTTATCTGTACCTATGGGAGTCATCAATGGGGAGTGTCACAGGGCTTGGCTCTTTGCACAGTCCTaGCATGCATTACCCAATAAT +
Preference number: 4 (lower is better)
Translates to: LTLSVPMGVINGECHRAWLFAQS*HALPNN
Trigger: ATTATTGGGTAATGCATGCCAGGACTGTGCAAAGAG...CCAAGCCCTGTGACACTCCCCATTGATGACTCCCATAGGTACAGATAAAGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CCA 90 bp TTAACTTTATCTGTACCTATGGGAGTCATCAATGGGGAGTGTCACAGGGCTTGGTTCGTTTGGGCACTGTaGTTACAGAAGGCTAGTTTT +
Preference number: 4 (lower is better)
Translates to: LTLSVPMGVINGECHRAWFVWAL*LQKASF
Trigger: AAAACTAGCCTTCTGTAACCACAGTGCCCAAACGAA...CCAAGCCCTGTGACACTCCCCATTGATGACTCCCATAGGTACAGATAAAGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CCA 90 bp TCTTTGGCAGCTACTGTTGCTTGGACAGTCTTTACTCTTCCCCTTTTATTACGAGCAGCTACTGTTGCTTaGACAGTCTTTACTCTTCCC +
Preference number: 4 (lower is better)
Translates to: SLAATVAWTVFTLPLLLRAATVA*TVFTLP
Trigger: GGGAAGAGTAAAGACTGTCCAAGCAACAGTAGCTGC...TCGTAATAAAAGGGGAAGAGTAAAGACTGTCCAAGCAACAGTAGCTGCCAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CCA 90 bp TTATCTGTACCTATGGGAGTCATCAATGGGGAGTGTCACAGGGCTTGGCAAGAATTCGTATTTTCTCTTTaGCAGCTACTGTTGCTTGGA +
Preference number: 4 (lower is better)
Translates to: LSVPMGVINGECHRAWQEFVFSL*QLLLLG
Trigger: TCCAAGCAACAGTAGCTGCCAAAGAGAAAATACGAA...TTCTTGCCAAGCCCTGTGACACTCCCCATTGATGACTCCCATAGGTACAGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CCA 90 bp ACAGAAAGACTGGATATTACCCCAGAGAATAAAGACTTGCAAAGCCTGGAACTTACTGAAAAGGGCCTCTaGCTCCTCCGATTTCAGTTC +
Preference number: 4 (lower is better)
Translates to: TERLDITPENKDLQSLELTEKGL*LLRFQF
Trigger: GAACTGAAATCGGAGGAGCCAGAGGCCCTTTTCAGT...AAGTTCCAGGCTTTGCAAGTCTTTATTCTCTGGGGTAATATCCAGTCTTTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR TCA 90 bp CTGGATATTACCCCAGAGAATAAAGACTTGCAAAGCCTGGAACTTATAATGTTTACGGATTCTGGTCCCTaGGGTAGCTATCCATCAGTC +
Preference number: 4 (lower is better)
Translates to: LDITPENKDLQSLELIMFTDSGP*GSYPSV
Trigger: GACTGATGGATAGCTACCTCAGGGACCAGAATCCGT...AAACATTATAAGTTCCAGGCTTTGCAAGTCTTTATTCTCTGGGGTAATATCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR TCA 90 bp CCTAGACAGCTGTGGAACCGTGAGCCAATTACAGCTCTTTTCTTTATATATTACACGAAAATCTCATGCTaGACTGTGATCCCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: PRQLWNREPITALFFIYYTKISC*TVIPSA
Trigger: AGCACTGGGGATCACAGTTCAGCATGAGATTTTCGT...GTAATATATAAAGAAAAGAGCTGTAATTGGCTCACGGTTCCACAGCTGTCTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000405673.5
CDS-3UTR GCA 90 bp TTAACTTTATCTGTACCTATGGGAGTCATCAATGGGGAGTGTCACAGGGCTTGGGTGCAGAAGCATATCTaGCTGATGCTTAAAGAAATG +
Preference number: 4 (lower is better)
Translates to: LTLSVPMGVINGECHRAWVQKHI*LMLKEM
Trigger: CATTTCTTTAAGCATCAGGCAGATATGCTTCTGCAC...CCAAGCCCTGTGACACTCCCCATTGATGACTCCCATAGGTACAGATAAAGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR GCA 90 bp ACAGAAAGACTGGATATTACCCCAGAGAATAAAGACTTGCAAAGCCTGGAACTTGCCCTTTTCAAGTTTTaGCTCCCTCACTCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: TERLDITPENKDLQSLELALFKF*LPHSLQ
Trigger: TTGCAGAGAGTGAGGGAGGCAAAACTTGAAAAGGGC...AAGTTCCAGGCTTTGCAAGTCTTTATTCTCTGGGGTAATATCCAGTCTTTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR GCA 90 bp ACAGAAAGACTGGATATTACCCCAGAGAATAAAGACTTGCAAAGCCTGGAACTTTTCTCTCCCTCCCTATaGATCCTACCCTTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: TERLDITPENKDLQSLELFSPSL*ILPFCF
Trigger: GAAACAGAAGGGTAGGATGCATAGGGAGGGAGAGAA...AAGTTCCAGGCTTTGCAAGTCTTTATTCTCTGGGGTAATATCCAGTCTTTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CCA 90 bp TCTTTGGCAGCTACTGTTGCTTGGACAGTCTTTACTCTTCCCCTTTTATTACGAGTGCGGTATAAGTTCTaGAGGACTTCCATGACTTCT +
Preference number: 4 (lower is better)
Translates to: SLAATVAWTVFTLPLLLRVRYKF*RTSMTS
Trigger: AGAAGTCATGGAAGTCCTCCAGAACTTATACCGCAC...TCGTAATAAAAGGGGAAGAGTAAAGACTGTCCAAGCAACAGTAGCTGCCAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR GCA 90 bp CTGGATATTACCCCAGAGAATAAAGACTTGCAAAGCCTGGAACTTATAATGTTTTTGAGATCGTACCACTaGACTCTGTCCTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: LDITPENKDLQSLELIMFLRSYH*TLSWVT
Trigger: TGTCACCCAGGACAGAGTGCAGTGGTACGATCTCAA...AAACATTATAAGTTCCAGGCTTTGCAAGTCTTTATTCTCTGGGGTAATATCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CCA 90 bp TCTTTGGCAGCTACTGTTGCTTGGACAGTCTTTACTCTTCCCCTTTTATTACGAGTCTTGCACATATCCTaGAAAGTGGTCAAAACAGTC +
Preference number: 4 (lower is better)
Translates to: SLAATVAWTVFTLPLLLRVLHIS*KVVKTV
Trigger: GACTGTTTTGACCACTTTCCAGGATATGTGCAAGAC...TCGTAATAAAAGGGGAAGAGTAAAGACTGTCCAAGCAACAGTAGCTGCCAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CCA 90 bp ACAGAAAGACTGGATATTACCCCAGAGAATAAAGACTTGCAAAGCCTGGAACTTGTTTGCAGATCTGAGTaGCAAGGTCTTGCACATATC +
Preference number: 4 (lower is better)
Translates to: TERLDITPENKDLQSLELVCRSE*QGLAHI
Trigger: GATATGTGCAAGACCTTGCCACTCAGATCTGCAAAC...AAGTTCCAGGCTTTGCAAGTCTTTATTCTCTGGGGTAATATCCAGTCTTTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR TCA 90 bp TCTTTGGCAGCTACTGTTGCTTGGACAGTCTTTACTCTTCCCCTTTTATTACGAAGAAGCATATCTGCCTaGTGCTTAAAGAAATGGTCT +
Preference number: 4 (lower is better)
Translates to: SLAATVAWTVFTLPLLLRRSISA*CLKKWS
Trigger: AGACCATTTCTTTAAGCATCAGGCAGATATGCTTCT...TCGTAATAAAAGGGGAAGAGTAAAGACTGTCCAAGCAACAGTAGCTGCCAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CCA 90 bp ACAGAAAGACTGGATATTACCCCAGAGAATAAAGACTTGCAAAGCCTGGAACTTTTCGTTTGGGCACTGTaGTTACAGAAGGCTAGTTTT +
Preference number: 4 (lower is better)
Translates to: TERLDITPENKDLQSLELFVWAL*LQKASF
Trigger: AAAACTAGCCTTCTGTAACCACAGTGCCCAAACGAA...AAGTTCCAGGCTTTGCAAGTCTTTATTCTCTGGGGTAATATCCAGTCTTTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CCA 90 bp AAAGACTTGCAAAGCCTGGAACTTATAATGTTTGAAACCTGGTCTCTCGAACTTCAAACAGAAAGGACTTaGTGCGGTATAAGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: KDLQSLELIMFETWSLELQTERT*CGISSG
Trigger: TCCAGAACTTATACCGCACCAAGTCCTTTCTGTTTG...AAGTTCGAGAGACCAGGTTTCAAACATTATAAGTTCCAGGCTTTGCAAGTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CCA 90 bp ACAGAAAGACTGGATATTACCCCAGAGAATAAAGACTTGCAAAGCCTGGAACTTTTCGTATTTTCTCTTTaGCAGCTACTGTTGCTTGGA +
Preference number: 4 (lower is better)
Translates to: TERLDITPENKDLQSLELFVFSL*QLLLLG
Trigger: TCCAAGCAACAGTAGCTGCCAAAGAGAAAATACGAA...AAGTTCCAGGCTTTGCAAGTCTTTATTCTCTGGGGTAATATCCAGTCTTTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CCA 90 bp ACAGAAAGACTGGATATTACCCCAGAGAATAAAGACTTGCAAAGCCTGGAACTTCAAACTCCCTTAATGTaGGCCATGGAAGAGAATTTT +
Preference number: 4 (lower is better)
Translates to: TERLDITPENKDLQSLELQTPLM*AMEENF
Trigger: AAAATTCTCTTCCATGGCCCACATTAAGGGAGTTTG...AAGTTCCAGGCTTTGCAAGTCTTTATTCTCTGGGGTAATATCCAGTCTTTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CCA 90 bp TTAATAACACCATGTGTTGGCAAGATACAGGAAATGGATACTCCCACACTCAGCAATAACACCATGTGTTaGCAAGATACAGGAAATGGA +
Preference number: 4 (lower is better)
Translates to: LITPCVGKIQEMDTPTLSNNTMC*QDTGNG
Trigger: TCCATTTCCTGTATCTTGCCAACACATGGTGTTATT...GCTGAGTGTGGGAGTATCCATTTCCTGTATCTTGCCAACACATGGTGTTATTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405673.5
CDS-3UTR TCA 90 bp CTGGATATTACCCCAGAGAATAAAGACTTGCAAAGCCTGGAACTTATAATGTTTACTCTTCCCCGAGGCTaGGAATTTCTCCTAAAAATA +
Preference number: 4 (lower is better)
Translates to: LDITPENKDLQSLELIMFTLPRG*EFLLKI
Trigger: TATTTTTAGGAGAAATTCTCAGCCTCGGGGAAGAGT...AAACATTATAAGTTCCAGGCTTTGCAAGTCTTTATTCTCTGGGGTAATATCCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000216214.7
CDS-3UTR CCA 90 bp CTGGATATTACCCCAGAGAATAAAGACTTGCAAAGCCTGGAACTTATAATGTTTCTCTTTGCACAGTCCTaGCATGCATTACCCAATAAT +
Preference number: 4 (lower is better)
Translates to: LDITPENKDLQSLELIMFLFAQS*HALPNN
Trigger: ATTATTGGGTAATGCATGCCAGGACTGTGCAAAGAG...AAACATTATAAGTTCCAGGCTTTGCAAGTCTTTATTCTCTGGGGTAATATCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR GCA 90 bp CTGGATATTACCCCAGAGAATAAAGACTTGCAAAGCCTGGAACTTATAATGTTTGAAGGTTTAAAGTGTTaGAGGCCCTTTTCAAGTTTT +
Preference number: 4 (lower is better)
Translates to: LDITPENKDLQSLELIMFEGLKC*RPFSSF
Trigger: AAAACTTGAAAAGGGCCTGCAACACTTTAAACCTTC...AAACATTATAAGTTCCAGGCTTTGCAAGTCTTTATTCTCTGGGGTAATATCCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS GCA 90 bp GGCACGCGGGCTGGCCCGGCGAGCCGCGCGTCCCGTTTCCTCATTTaGAGAAAGGGGGCGGGAGCACTTTGCAGGGACGTGGCGAGCATC +
Preference number: 5 (lower is better)
Translates to: GTRAGPASRASRFLI*RKGAGALCRDVASI
Trigger: GATGCTCGCCACGTCCCTGCAAAGTGCTCCCGCCCCCTTTCTGCAAATGAGGAAACGGGACGCGCGGCTCGCCGGGCCAGCCCGCGTGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000491671.1
CDS GCA 90 bp GCAGAGAGCAGATGTCTACTCCATGGCACTACCGGCAGGAGTGGGTaGCTTGGCCCTGCCCGCTCCCCTCAGGCGGCCCTGCCCCCGTGT +
Preference number: 5 (lower is better)
Translates to: AESRCLLHGTTGRSG*LGPARSPQAALPPC
Trigger: ACACGGGGGCAGGGCCGCCTGAGGGGAGCGGGCAGGGCCAAGGCACCCACTCCTGCCGGTAGTGCCATGGAGTAGACATCTGCTCTCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000459849.1
ENST00000476754.1
CDS CCA 90 bp AGACGCAGAGAGCAGATGTCTACTCCATGGCACTACCGGCAGGAGTaGGTGCCTTGGCCCTGCCCGCTCCCCTCAGGCGGCCCTGCCCCC +
Preference number: 5 (lower is better)
Translates to: RRREQMSTPWHYRQE*VPWPCPLPSGGPAP
Trigger: GGGGGCAGGGCCGCCTGAGGGGAGCGGGCAGGGCCAAGGCACCCACTCCTGCCGGTAGTGCCATGGAGTAGACATCTGCTCTCTGCGTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459849.1
ENST00000476754.1
CDS CCA 90 bp GTCCACTGGGGGTTCCCAGAAGCCAGCACGGCGCTGGGCACACCATaGCCGCCCACATGTTTGTGCGTGCGTGAGTGTCTTCCCCGCGCT +
Preference number: 5 (lower is better)
Translates to: VHWGFPEASTALGTP*PPTCLCVRECLPRA
Trigger: AGCGCGGGGAAGACACTCACGCACGCACAAACATGTGGGCGGCCATGGTGTGCCCAGCGCCGTGCTGGCTTCTGGGAACCCCCAGTGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000216214.7
ENST00000481447.1
ENST00000491671.1
CDS GCA 90 bp GCAGCTTCTCCACGAGCAAAGGGCAGGGATTCCGGGGGCCACTGCTaGGCTGACGCCAGTCCCGATAACCAGGAGCAGTTCCTGGGGCTG +
Preference number: 5 (lower is better)
Translates to: AASPRAKGRDSGGHC*ADASPDNQEQFLGL
Trigger: CAGCCCCAGGAACTGCTCCTGGTTATCGGGACTGGCGTCAGCGCAGCAGTGGCCCCCGGAATCCCTGCCCTTTGCTCGTGGAGAAGCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216214.7
ENST00000405673.5
ENST00000427777.1
ENST00000441876.7
ENST00000477714.1
CDS GCA 90 bp CCGGAACTCGGCGACGTCTCCGGGGTGCAGCACCTCCAGCTGCTCTaGAGCCTCGATGACGGCCTCGATGCAGCTTCTCCACGAGCAAAG +
Preference number: 5 (lower is better)
Translates to: PELGDVSGVQHLQLL*SLDDGLDAASPRAK
Trigger: CTTTGCTCGTGGAGAAGCTGCATCGAGGCCGTCATCGAGGCTGCAGAGCAGCTGGAGGTGCTGCACCCCGGAGACGTCGCCGAGTTCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216214.7
ENST00000405673.5
ENST00000427777.1
ENST00000441876.7
ENST00000477714.1
CDS GCA 90 bp TTCCTCCGGAACTCGGCGACGTCTCCGGGGTGCAGCACCTCCAGCTaGTCTGCAGCCTCGATGACGGCCTCGATGCAGCTTCTCCACGAG +
Preference number: 5 (lower is better)
Translates to: FLRNSATSPGCSTSS*SAASMTASMQLLHE
Trigger: CTCGTGGAGAAGCTGCATCGAGGCCGTCATCGAGGCTGCAGAGCAGCTGGAGGTGCTGCACCCCGGAGACGTCGCCGAGTTCCGGAGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216214.7
ENST00000405673.5
ENST00000427777.1
ENST00000441876.7
ENST00000477714.1
CDS CCA 90 bp GTGGGGACCATGTGGCTCAGACGCAGAGAGCAGATGTCTACTCCATaGCACTACCGGCAGGAGTGGGTGCCTTGGCCCTGCCCGCTCCCC +
Preference number: 5 (lower is better)
Translates to: VGTMWLRRREQMSTP*HYRQEWVPWPCPLP
Trigger: GGGGAGCGGGCAGGGCCAAGGCACCCACTCCTGCCGGTAGTGCCATGGAGTAGACATCTGCTCTCTGCGTCTGAGCCACATGGTCCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459849.1
ENST00000476754.1
CDS TCA 90 bp GTCAGTGGAGCCGAGACACCAAGAGCTCGTCCTCCTCGGCCACCCTaGGGCAGTGACTGGGAACGGCAGGGACTGGGAACAGGCTTCTGG +
Preference number: 5 (lower is better)
Translates to: VSGAETPRARPPRPP*GSDWERQGLGTGFW
Trigger: CCAGAAGCCTGTTCCCAGTCCCTGCCGTTCCCAGTCACTGCCTCAGGGTGGCCGAGGAGGACGAGCTCTTGGTGTCTCGGCTCCACTGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462361.1
CDS GCA 90 bp CGGTCCTTTGTCACTTTCCTCCGGAACTCGGCGACGTCTCCGGGGTaGAGCACCTCCAGCTGCTCTGCAGCCTCGATGACGGCCTCGATG +
Preference number: 5 (lower is better)
Translates to: RSFVTFLRNSATSPG*STSSCSAASMTASM
Trigger: CATCGAGGCCGTCATCGAGGCTGCAGAGCAGCTGGAGGTGCTGCACCCCGGAGACGTCGCCGAGTTCCGGAGGAAAGTGACAAAGGACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216214.7
ENST00000405673.5
ENST00000427777.1
ENST00000441876.7
ENST00000477714.1
CDS-3UTR CAA 90 bp CACAGGGGAGCCCTCTCACCCAGCCTTGAGGGCCACATGCCCATGTGGCTCTCTTTGCGAGGACTGAGATaGTGCGTGGGTGGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: HRGALSPSLEGHMPMWLSLRGLR*CVGGLG
Trigger: GCCCAGCCCACCCACGCACAATCTCAGTCCTCGCAA...AGAGAGCCACATGGGCATGTGGCCCTCAAGGCTGGGTGAGAGGGCTCCCCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216214.7
CDS-3UTR CAA 90 bp CCACAGAAGCCTCTGCCGGGTCACAGTCAGAGAAGCTCCCCGGGCACCGGCAGCACAGGTCCCGGTCCTTaGTCACTTTCCTCCGGAACT +
Preference number: 5 (lower is better)
Translates to: PQKPLPGHSQRSSPGTGSTGPGP*SLSSGT
Trigger: AGTTCCGGAGGAAAGTGACAAAGGACCGGGACCTGT...GCTGCCGGTGCCCGGGGAGCTTCTCTGACTGTGACCCGGCAGAGGCTTCTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CAA 90 bp ACTGTAGGGCCGCTCATGCACCGCCACAGAAGCCTCTGCCGGGTCACAGTCAGAAGGCAGGAGAATCACTaGAGCCCAGGCGGTGGTGGC +
Preference number: 5 (lower is better)
Translates to: TVGPLMHRHRSLCRVTVRRQENH*SPGGGG
Trigger: GCCACCACCGCCTGGGCTCAAGTGATTCTCCTGCCT...TCTGACTGTGACCCGGCAGAGGCTTCTGTGGCGGTGCATGAGCGGCCCTACAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CAA 90 bp ACTGTAGGGCCGCTCATGCACCGCCACAGAAGCCTCTGCCGGGTCACAGTCAGATGGAAGAAGCTGGGCTaGGCATCGCCTGTGCGAGGT +
Preference number: 5 (lower is better)
Translates to: TVGPLMHRHRSLCRVTVRWKKLG*ASPVRG
Trigger: ACCTCGCACAGGCGATGCCAAGCCCAGCTTCTTCCA...TCTGACTGTGACCCGGCAGAGGCTTCTGTGGCGGTGCATGAGCGGCCCTACAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS TCA 90 bp ACGCGATCAGCATCTCTACCTCCCAGGCTTGGTGCGAGGACTCGCTaGAGGAGCCAGCTGGCAAAGGCAGCATGGTGTGGTGTCCGCGAT +
Preference number: 5 (lower is better)
Translates to: TRSASLPPRLGARTR*RSQLAKAAWCGVRD
Trigger: ATCGCGGACACCACACCATGCTGCCTTTGCCAGCTGGCTCCTTCAGCGAGTCCTCGCACCAAGCCTGGGAGGTAGAGATGCTGATCGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483102.5
CDS GCA 90 bp GAAGCCAGCACGGCGCTGGGCACACCATGGCCGCCCACATGTTTGTaGGTGCGTGAGTGTCTTCCCCGCGCTCTTCCCTCATCAAGAAAT +
Preference number: 5 (lower is better)
Translates to: EASTALGTPWPPTCL*VRECLPRALPSSRN
Trigger: ATTTCTTGATGAGGGAAGAGCGCGGGGAAGACACTCACGCACGCACAAACATGTGGGCGGCCATGGTGTGCCCAGCGCCGTGCTGGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216214.7
ENST00000481447.1
ENST00000491671.1
CDS GCA 90 bp CGCGCGTCCCGTTTCCTCATTTGCAGAAAGGGGGCGGGAGCACTTTaGAGGGACGTGGCGAGCATCAAGTGCGATCGGAAGCGCTCCTTT +
Preference number: 5 (lower is better)
Translates to: RASRFLICRKGAGAL*RDVASIKCDRKRSF
Trigger: AAAGGAGCGCTTCCGATCGCACTTGATGCTCGCCACGTCCCTGCAAAGTGCTCCCGCCCCCTTTCTGCAAATGAGGAAACGGGACGCGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000491671.1
CDS CCA 90 bp GCAGGTGCCGCGTCCGTAAAGGGTGTGATCCTAGCACCTACCTTGTaGGTATTGCGAGGACTGAGATTGTGCGTGGGTGGGCTGGGCACG +
Preference number: 5 (lower is better)
Translates to: AGAASVKGVILAPTL*VLRGLRLCVGGLGT
Trigger: CGTGCCCAGCCCACCCACGCACAATCTCAGTCCTCGCAATACCCACAAGGTAGGTGCTAGGATCACACCCTTTACGGACGCGGCACCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216214.7
CDS-3UTR CAA 90 bp CACAGGGGAGCCCTCTCACCCAGCCTTGAGGGCCACATGCCCATGTGGCTCTCTGTGGCTGCAGTGAGCTaGAGATCGTACCACTGCACT +
Preference number: 5 (lower is better)
Translates to: HRGALSPSLEGHMPMWLSVAAVS*RSYHCT
Trigger: AGTGCAGTGGTACGATCTCAAGCTCACTGCAGCCAC...AGAGAGCCACATGGGCATGTGGCCCTCAAGGCTGGGTGAGAGGGCTCCCCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CAA 90 bp GCCTGTCAGATGGGAACGGGAACACCAGGTCCATCCCTTCCCACGGATTCTGGTAGGCAGGAGAATCACTaGAGCCCAGGCGGTGGTGGC +
Preference number: 5 (lower is better)
Translates to: ACQMGTGTPGPSLPTDSGRQENH*SPGGGG
Trigger: GCCACCACCGCCTGGGCTCAAGTGATTCTCCTGCCT...ACCAGAATCCGTGGGAAGGGATGGACCTGGTGTTCCCGTTCCCATCTGACAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS TCA 90 bp CACGGCGCTGGGCACACCATGGCCGCCCACATGTTTGTGCGTGCGTaGGTGTCTTCCCCGCGCTCTTCCCTCATCAAGAAATACTCTTCC +
Preference number: 5 (lower is better)
Translates to: HGAGHTMAAHMFVRA*VSSPRSSLIKKYSS
Trigger: GGAAGAGTATTTCTTGATGAGGGAAGAGCGCGGGGAAGACACTCACGCACGCACAAACATGTGGGCGGCCATGGTGTGCCCAGCGCCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216214.7
ENST00000481447.1
ENST00000491671.1
CDS TCA 90 bp TGTCATAGTTGGTGGTCAGGACCATGGCGCCCCTGTCCATCAGGCTaGGGATCGACTGCAGCACCACAGGACTCCGGATGTGCTGCTCCA +
Preference number: 5 (lower is better)
Translates to: CHSWWSGPWRPCPSG*GSTAAPQDSGCAAP
Trigger: TGGAGCAGCACATCCGGAGTCCTGTGGTGCTGCAGTCGATCCTCAGCCTGATGGACAGGGGCGCCATGGTCCTGACCACCAACTATGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216214.7
ENST00000405673.5
ENST00000441876.7
ENST00000477714.1
CDS CCA 90 bp GTCACTGTCAAGTCATCTTCACCCCGGAGCCCGCACAGCAGCAGGTaGAATGGACACAAACACCAACAGCCCTGCTGCCATCACTGGGCG +
Preference number: 5 (lower is better)
Translates to: VTVKSSSPRSPHSSR*NGHKHQQPCCHHWA
Trigger: CGCCCAGTGATGGCAGCAGGGCTGTTGGTGTTTGTGTCCATTCCACCTGCTGCTGTGCGGGCTCCGGGGTGAAGATGACTTGACAGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459849.1
ENST00000476754.1
CDS CCA 90 bp CTCTACCTCCCAGGCTTGGTGCGAGGACTCGCTGAAGGAGCCAGCTaGCAAAGGCAGCATGGTGTGGTGTCCGCGATCACTAGCATGACT +
Preference number: 5 (lower is better)
Translates to: LYLPGLVRGLAEGAS*QRQHGVVSAITSMT
Trigger: AGTCATGCTAGTGATCGCGGACACCACACCATGCTGCCTTTGCCAGCTGGCTCCTTCAGCGAGTCCTCGCACCAAGCCTGGGAGGTAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483102.5
CDS-3UTR CAA 90 bp ACTGTAGGGCCGCTCATGCACCGCCACAGAAGCCTCTGCCGGGTCACAGTCAGAGCCCATGTGGCTCTCTaGGTGTATGTGACGGTTTCG +
Preference number: 5 (lower is better)
Translates to: TVGPLMHRHRSLCRVTVRAHVAL*VYVTVS
Trigger: CGAAACCGTCACATACACCAAGAGAGCCACATGGGC...TCTGACTGTGACCCGGCAGAGGCTTCTGTGGCGGTGCATGAGCGGCCCTACAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CAA 90 bp CCACAGAAGCCTCTGCCGGGTCACAGTCAGAGAAGCTCCCCGGGCACCGGCAGCGCTATCCATCAGTCCTaGCAAAGTCCACCTGAAATG +
Preference number: 5 (lower is better)
Translates to: PQKPLPGHSQRSSPGTGSAIHQS*QSPPEM
Trigger: CATTTCAGGTGGACTTTGCAAGGACTGATGGATAGC...GCTGCCGGTGCCCGGGGAGCTTCTCTGACTGTGACCCGGCAGAGGCTTCTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS TCA 90 bp CCAGCTGGCAAAGGCAGCATGGTGTGGTGTCCGCGATCACTAGCATaGCTGTCACTGTCATGGGCCTCCTCTCCCATCAGGAGTGGCACT +
Preference number: 5 (lower is better)
Translates to: PAGKGSMVWCPRSLA*LSLSWASSPIRSGT
Trigger: AGTGCCACTCCTGATGGGAGAGGAGGCCCATGACAGTGACAGTCATGCTAGTGATCGCGGACACCACACCATGCTGCCTTTGCCAGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483102.5
CDS GCA 90 bp AGAAAGGGGGCGGGAGCACTTTGCAGGGACGTGGCGAGCATCAAGTaGGATCGGAAGCGCTCCTTTGCAACTGCATCCTGCACCACACTT +
Preference number: 5 (lower is better)
Translates to: RKGAGALCRDVASIK*DRKRSFATASCTTL
Trigger: AAGTGTGGTGCAGGATGCAGTTGCAAAGGAGCGCTTCCGATCGCACTTGATGCTCGCCACGTCCCTGCAAAGTGCTCCCGCCCCCTTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000491671.1
CDS GCA 90 bp TCCATCAGGCTGAGGATCGACTGCAGCACCACAGGACTCCGGATGTaGTGCTCCAGGTCGTCAAACACCTCCATCAGGCAGTCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: SIRLRIDCSTTGLRM*CSRSSNTSIRQSWK
Trigger: CTTCCAGGACTGCCTGATGGAGGTGTTTGACGACCTGGAGCAGCACATCCGGAGTCCTGTGGTGCTGCAGTCGATCCTCAGCCTGATGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216214.7
ENST00000405673.5
ENST00000427777.1
ENST00000441876.7
ENST00000477714.1
CDS CCA 90 bp GGCTTGGCATCGCCTGTGCGAGGTGACATCTTCCGGATCAGATCATaGGCGACAACCAACAGGTCCCGGTCCTTTGTCACTTTCCTCCGG +
Preference number: 5 (lower is better)
Translates to: GLASPVRGDIFRIRS*ATTNRSRSFVTFLR
Trigger: CCGGAGGAAAGTGACAAAGGACCGGGACCTGTTGGTTGTCGCCCATGATCTGATCCGGAAGATGTCACCTCGCACAGGCGATGCCAAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216214.7
ENST00000405673.5
ENST00000427777.1
ENST00000441876.7
ENST00000477714.1
CDS CCA 90 bp CTGGCTGTCTGTTTCCAACAGCAAGCCCCAGCAGTGGGGACCATGTaGCTCAGACGCAGAGAGCAGATGTCTACTCCATGGCACTACCGG +
Preference number: 5 (lower is better)
Translates to: LAVCFQQQAPAVGTM*LRRREQMSTPWHYR
Trigger: CCGGTAGTGCCATGGAGTAGACATCTGCTCTCTGCGTCTGAGCCACATGGTCCCCACTGCTGGGGCTTGCTGTTGGAAACAGACAGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000459849.1
ENST00000476754.1
CDS-3UTR CAA 90 bp CACAGGGGAGCCCTCTCACCCAGCCTTGAGGGCCACATGCCCATGTGGCTCTCTACCAAGCAGGGCTGTTaGTTTCCAAAGAGAACCCTC +
Preference number: 5 (lower is better)
Translates to: HRGALSPSLEGHMPMWLSTKQGC*FPKRTL
Trigger: GAGGGTTCTCTTTGGAAACAAACAGCCCTGCTTGGT...AGAGAGCCACATGGGCATGTGGCCCTCAAGGCTGGGTGAGAGGGCTCCCCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS GCA 90 bp GTGATCCTAGCACCTACCTTGTGGGTATTGCGAGGACTGAGATTGTaGGTGGGTGGGCTGGGCACGGGCCCCCTAGCGATCTTATTACTC +
Preference number: 5 (lower is better)
Translates to: VILAPTLWVLRGLRL*VGGLGTGPLAILLL
Trigger: GAGTAATAAGATCGCTAGGGGGCCCGTGCCCAGCCCACCCACGCACAATCTCAGTCCTCGCAATACCCACAAGGTAGGTGCTAGGATCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216214.7
CDS GCA 90 bp GCGAGCATCAAGTGCGATCGGAAGCGCTCCTTTGCAACTGCATCCTaGACCACACTTAGGCACAGCTTCTGTCCCCAACCCAGACCTGAG +
Preference number: 5 (lower is better)
Translates to: ASIKCDRKRSFATAS*TTLRHSFCPQPRPE
Trigger: CTCAGGTCTGGGTTGGGGACAGAAGCTGTGCCTAAGTGTGGTGCAGGATGCAGTTGCAAAGGAGCGCTTCCGATCGCACTTGATGCTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000491671.1
CDS GCA 90 bp ATCAGGCTGAGGATCGACTGCAGCACCACAGGACTCCGGATGTGCTaGTCCAGGTCGTCAAACACCTCCATCAGGCAGTCCTGGAAGAAG +
Preference number: 5 (lower is better)
Translates to: IRLRIDCSTTGLRMC*SRSSNTSIRQSWKK
Trigger: CTTCTTCCAGGACTGCCTGATGGAGGTGTTTGACGACCTGGAGCAGCACATCCGGAGTCCTGTGGTGCTGCAGTCGATCCTCAGCCTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216214.7
ENST00000405673.5
ENST00000427777.1
ENST00000441876.7
ENST00000477714.1
CDS CCA 90 bp AGCACCTACCTTGTGGGTATTGCGAGGACTGAGATTGTGCGTGGGTaGGCTGGGCACGGGCCCCCTAGCGATCTTATTACTCCTCCTTTG +
Preference number: 5 (lower is better)
Translates to: STYLVGIARTEIVRG*AGHGPPSDLITPPL
Trigger: CAAAGGAGGAGTAATAAGATCGCTAGGGGGCCCGTGCCCAGCCCACCCACGCACAATCTCAGTCCTCGCAATACCCACAAGGTAGGTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216214.7
CDS CCA 90 bp GCTCCAGGTCGTCAAACACCTCCATCAGGCAGTCCTGGAAGAAGCTaGGCTTGGCATCGCCTGTGCGAGGTGACATCTTCCGGATCAGAT +
Preference number: 5 (lower is better)
Translates to: APGRQTPPSGSPGRS*AWHRLCEVTSSGSD
Trigger: ATCTGATCCGGAAGATGTCACCTCGCACAGGCGATGCCAAGCCCAGCTTCTTCCAGGACTGCCTGATGGAGGTGTTTGACGACCTGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216214.7
ENST00000405673.5
ENST00000427777.1
ENST00000441876.7
ENST00000477714.1
CDS-3UTR CAA 90 bp CACAGGGGAGCCCTCTCACCCAGCCTTGAGGGCCACATGCCCATGTGGCTCTCTCTTTGGCAGCTACTGTaGCTTGGACAGTCTTTACTC +
Preference number: 5 (lower is better)
Translates to: HRGALSPSLEGHMPMWLSLWQLL*LGQSLL
Trigger: GAGTAAAGACTGTCCAAGCAACAGTAGCTGCCAAAG...AGAGAGCCACATGGGCATGTGGCCCTCAAGGCTGGGTGAGAGGGCTCCCCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CAA 90 bp CTGCCTTCTGCCACTATTGGAAACTTCCTGAGGCCTCCCCGGAAGCAGATGCTGCCTCAGCCTCCCAAGTaGCCAGTGTGCCACTTTCCA +
Preference number: 5 (lower is better)
Translates to: LPSATIGNFLRPPRKQMLPQPPK*PVCHFP
Trigger: TGGAAAGTGGCACACTGGCAACTTGGGAGGCTGAGG...CAGCATCTGCTTCCGGGGAGGCCTCAGGAAGTTTCCAATAGTGGCAGAAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405673.5
CDS TCA 90 bp CTTCCGATGCTAATTAGGACGGGCCGTACCATGACTTCTGCGTCTTaGGTGACGTCTTTATACCCCGATGGGTCCAGCACCACCCCGCAG +
Preference number: 5 (lower is better)
Translates to: LPMLIRTGRTMTSAS*VTSLYPDGSSTTPQ
Trigger: CTGCGGGGTGGTGCTGGACCCATCGGGGTATAAAGACGTCACTCAAGACGCAGAAGTCATGGTACGGCCCGTCCTAATTAGCATCGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476754.1
CDS GCA 90 bp GAGGCTGAGAATTTCTCCTTGTGGGTATTGCGAGGACTGAGATTGTaGGTGGGTGGGCTGGGCACGGGCCCCCTAGCGATCTTATTACTC +
Preference number: 5 (lower is better)
Translates to: EAENFSLWVLRGLRL*VGGLGTGPLAILLL
Trigger: GAGTAATAAGATCGCTAGGGGGCCCGTGCCCAGCCCACCCACGCACAATCTCAGTCCTCGCAATACCCACAAGGAGAAATTCTCAGCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491671.1
CDS TCA 90 bp GGAATGGACACAAACACCAACAGCCCTGCTGCCATCACTGGGCGGTaGGCCAGCTGGCAGTTCTGTTTATGCAACTGGCTGTCTGTTTCC +
Preference number: 5 (lower is better)
Translates to: GMDTNTNSPAAITGR*ASWQFCLCNWLSVS
Trigger: GGAAACAGACAGCCAGTTGCATAAACAGAACTGCCAGCTGGCTCACCGCCCAGTGATGGCAGCAGGGCTGTTGGTGTTTGTGTCCATTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000459849.1
ENST00000476754.1
CDS GCA 90 bp GTCTTCAGACAGTGGAGTCCGGGGGAATCACAACGGAGAATCCCATaGCAAAACTCCCGCGAGCATGAGGATGGCACAGACACCAGTATC +
Preference number: 5 (lower is better)
Translates to: VFRQWSPGESQRRIP*QNSREHEDGTDTSI
Trigger: GATACTGGTGTCTGTGCCATCCTCATGCTCGCGGGAGTTTTGGCATGGGATTCTCCGTTGTGATTCCCCCGGACTCCACTGTCTGAAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479180.1
CDS CCA 90 bp GAATTTCTCCTTGTGGGTATTGCGAGGACTGAGATTGTGCGTGGGTaGGCTGGGCACGGGCCCCCTAGCGATCTTATTACTCCTCCTTTG +
Preference number: 5 (lower is better)
Translates to: EFLLVGIARTEIVRG*AGHGPPSDLITPPL
Trigger: CAAAGGAGGAGTAATAAGATCGCTAGGGGGCCCGTGCCCAGCCCACCCACGCACAATCTCAGTCCTCGCAATACCCACAAGGAGAAATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491671.1
CDS-3UTR CAA 90 bp GGTCTCTCGAACTTGAGCTATCCCGGTTGTCAGTCCCACAGTGGCCGTGCACAAACTTCATGTGCCCTCTaGCCCATTCAAGGACCTTGG +
Preference number: 5 (lower is better)
Translates to: GLSNLSYPGCQSHSGRAQTSCAL*PIQGPW
Trigger: CCAAGGTCCTTGAATGGGCAAGAGGGCACATGAAGT...TTGTGCACGGCCACTGTGGGACTGACAACCGGGATAGCTCAAGTTCGAGAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CAA 90 bp GCCTGTCAGATGGGAACGGGAACACCAGGTCCATCCCTTCCCACGGATTCTGGTGGCAGCTACTGTTGCTaGGACAGTCTTTACTCTTCC +
Preference number: 5 (lower is better)
Translates to: ACQMGTGTPGPSLPTDSGGSYCC*DSLYSS
Trigger: GGAAGAGTAAAGACTGTCCAAGCAACAGTAGCTGCC...ACCAGAATCCGTGGGAAGGGATGGACCTGGTGTTCCCGTTCCCATCTGACAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CAA 90 bp GCCTGTCAGATGGGAACGGGAACACCAGGTCCATCCCTTCCCACGGATTCTGGTACCAAGCAGGGCTGTTaGTTTCCAAAGAGAACCCTC +
Preference number: 5 (lower is better)
Translates to: ACQMGTGTPGPSLPTDSGTKQGC*FPKRTL
Trigger: GAGGGTTCTCTTTGGAAACAAACAGCCCTGCTTGGT...ACCAGAATCCGTGGGAAGGGATGGACCTGGTGTTCCCGTTCCCATCTGACAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CAA 90 bp GTCCACCTGAAATGTGTCCGCGTCACCCTCCTGCATAGTTCAACACACAGGGGAGCCCATTCAAGGACCTaGGTCTTGTCCTTCAAGTCC +
Preference number: 5 (lower is better)
Translates to: VHLKCVRVTLLHSSTHRGAHSRT*VLSFKS
Trigger: GGACTTGAAGGACAAGACCAAGGTCCTTGAATGGGC...TCCCCTGTGTGTTGAACTATGCAGGAGGGTGACGCGGACACATTTCAGGTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CAA 90 bp GCCTGTCAGATGGGAACGGGAACACCAGGTCCATCCCTTCCCACGGATTCTGGTCATGACTTCTGCGTCTaGAGTGACGTCTTTATACCC +
Preference number: 5 (lower is better)
Translates to: ACQMGTGTPGPSLPTDSGHDFCV*SDVFIP
Trigger: GGGTATAAAGACGTCACTCAAGACGCAGAAGTCATG...ACCAGAATCCGTGGGAAGGGATGGACCTGGTGTTCCCGTTCCCATCTGACAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CAA 90 bp GGTCTCTCGAACTTGAGCTATCCCGGTTGTCAGTCCCACAGTGGCCGTGCACAAGGAGTGTCACAGGGCTaGGCAAGAAATGTCACATTG +
Preference number: 5 (lower is better)
Translates to: GLSNLSYPGCQSHSGRAQGVSQG*ARNVTL
Trigger: CAATGTGACATTTCTTGCCAAGCCCTGTGACACTCC...TTGTGCACGGCCACTGTGGGACTGACAACCGGGATAGCTCAAGTTCGAGAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS GCA 90 bp GATCACGAAGGGTCTCCCCACAGCCCACAAACAGAAAGGACTTGGTaGGGTATAAGTTCTGGAGGACTTCCGATGCTAATTAGGACGGGC +
Preference number: 5 (lower is better)
Translates to: DHEGSPHSPQTERTW*GISSGGLPMLIRTG
Trigger: GCCCGTCCTAATTAGCATCGGAAGTCCTCCAGAACTTATACCGCACCAAGTCCTTTCTGTTTGTGGGCTGTGGGGAGACCCTTCGTGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476754.1
CDS-3UTR CAA 90 bp ACTATTGGAAACTTCCTGAGGCCTCCCCGGAAGCAGATGCTGCTATGCTTCCTAACAGGTCCCGGTCCTTaGTCACTTTCCTCCGGAACT +
Preference number: 5 (lower is better)
Translates to: TIGNFLRPPRKQMLLCFLTGPGP*SLSSGT
Trigger: AGTTCCGGAGGAAAGTGACAAAGGACCGGGACCTGT...TAGGAAGCATAGCAGCATCTGCTTCCGGGGAGGCCTCAGGAAGTTTCCAATAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405673.5
CDS TCA 90 bp CTTCCCCGCGCTCTTCCCTCATCAAGAAATACTCTTCCCCGAGGCTaGGAATTTCTCCTTGTGGGTATTGCGAGGACTGAGATTGTGCGT +
Preference number: 5 (lower is better)
Translates to: LPRALPSSRNTLPRG*EFLLVGIARTEIVR
Trigger: ACGCACAATCTCAGTCCTCGCAATACCCACAAGGAGAAATTCTCAGCCTCGGGGAAGAGTATTTCTTGATGAGGGAAGAGCGCGGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481447.1
ENST00000491671.1
CDS CCA 90 bp GCCACTGCTGCGCTGACGCCAGTCCCGATAACCAGGAGCAGTTCCTaGGGCTGTTTCCGGATGAGGCTTTTTAAAAACTTTCTGGATTTT +
Preference number: 5 (lower is better)
Translates to: ATAALTPVPITRSSS*GCFRMRLFKNFLDF
Trigger: AAAATCCAGAAAGTTTTTAAAAAGCCTCATCCGGAAACAGCCCCAGGAACTGCTCCTGGTTATCGGGACTGGCGTCAGCGCAGCAGTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000216214.7
ENST00000405673.5
ENST00000427777.1
ENST00000441876.7
ENST00000477714.1
CDS CCA 90 bp CCCTCTTGCCCATTCAAGGACCATGTGTTGGCAAGATACAGGAAATaGATACTCCCACACTCAGCCACTACCGGGAGTGTAACTGGTGCT +
Preference number: 5 (lower is better)
Translates to: PSCPFKDHVLARYRK*ILPHSATTGSVTGA
Trigger: AGCACCAGTTACACTCCCGGTAGTGGCTGAGTGTGGGAGTATCCATTTCCTGTATCTTGCCAACACATGGTCCTTGAATGGGCAAGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476478.1
CDS-3UTR CAA 90 bp ACATGCCCATGTGGCTCTCTTGGTGTATGTGACGGTTTCGCAATCAGAGATCCAATCGGAAGCGCTCCTTaGCAACTGCATCCTGCACCA +
Preference number: 5 (lower is better)
Translates to: TCPCGSLGVCDGFAIRDPIGSAP*QLHPAP
Trigger: TGGTGCAGGATGCAGTTGCAAAGGAGCGCTTCCGAT...TGGATCTCTGATTGCGAAACCGTCACATACACCAAGAGAGCCACATGGGCATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216214.7
CDS-3UTR CAA 90 bp TTAACTTTATCTGTACCTATGGGAGTCATCAATGGGGAGTGTCACAGGGCTTGGTGGAAGAAGCTGGGCTaGGCATCGCCTGTGCGAGGT +
Preference number: 5 (lower is better)
Translates to: LTLSVPMGVINGECHRAWWKKLG*ASPVRG
Trigger: ACCTCGCACAGGCGATGCCAAGCCCAGCTTCTTCCA...CCAAGCCCTGTGACACTCCCCATTGATGACTCCCATAGGTACAGATAAAGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS GCA 90 bp GTAGAGGCCGTGAATGTGGAGGACGCCGTACTTCATGTGCCCTCTTaGCCATTCAAGGACCATGTGTTGGCAAGATACAGGAAATGGATA +
Preference number: 5 (lower is better)
Translates to: VEAVNVEDAVLHVPS*PFKDHVLARYRKWI
Trigger: TATCCATTTCCTGTATCTTGCCAACACATGGTCCTTGAATGGGCAAGAGGGCACATGAAGTACGGCGTCCTCCACATTCACGGCCTCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476478.1
CDS CCA 90 bp TGTCCACGCGATCAGCATCTGGGCTTTGCTGTTTGCAGATCTGAGTaGCAAGGTCTTGCACATATCCTGGAAAGTGGTCAAAACAGTCCC +
Preference number: 5 (lower is better)
Translates to: CPRDQHLGFAVCRSE*QGLAHILESGQNSP
Trigger: GGGACTGTTTTGACCACTTTCCAGGATATGTGCAAGACCTTGCCACTCAGATCTGCAAACAGCAAAGCCCAGATGCTGATCGCGTGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216214.7
ENST00000441876.7
ENST00000487732.5
CDS CCA 90 bp TTCCTAAGCCACCATTCCTCATCTCATGAGACTCATCAGGCTGGTTaGACTCTCGCTGTTCTACACGGGACAGCACAGAAGGAAAACGCA +
Preference number: 5 (lower is better)
Translates to: FLSHHSSSHETHQAG*TLAVLHGTAQKENA
Trigger: TGCGTTTTCCTTCTGTGCTGTCCCGTGTAGAACAGCGAGAGTCCAACCAGCCTGATGAGTCTCATGAGATGAGGAATGGTGGCTTAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424557.1
ENST00000452238.5
CDS CCA 90 bp TCTGATCACGAAGGGTCTCCCCACAGCCCACAAACAGAAAGGACTTaGTGCGGTATAAGTTCTGGAGGACTTCCGATGCTAATTAGGACG +
Preference number: 5 (lower is better)
Translates to: SDHEGSPHSPQTERT*CGISSGGLPMLIRT
Trigger: CGTCCTAATTAGCATCGGAAGTCCTCCAGAACTTATACCGCACCAAGTCCTTTCTGTTTGTGGGCTGTGGGGAGACCCTTCGTGATCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476754.1
CDS-3UTR CAA 90 bp GCCTGTCAGATGGGAACGGGAACACCAGGTCCATCCCTTCCCACGGATTCTGGTTCTTTTTCAGAGTACTaGTCACTCTCCGAAATTAGG +
Preference number: 5 (lower is better)
Translates to: ACQMGTGTPGPSLPTDSGSFSEY*SLSEIR
Trigger: CCTAATTTCGGAGAGTGACAAGTACTCTGAAAAAGA...ACCAGAATCCGTGGGAAGGGATGGACCTGGTGTTCCCGTTCCCATCTGACAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216214.7
CDS GCA 90 bp CTTAAGTGCTCAAAACCTCTTTCTCAGCCTGAACTGCAGGTCTGGTaGTGGCTCCTCAGACAGTATTTCAAACACAACCACACGGAGTCC +
Preference number: 5 (lower is better)
Translates to: LKCSKPLSQPELQVW*WLLRQYFKHNHTES
Trigger: GGACTCCGTGTGGTTGTGTTTGAAATACTGTCTGAGGAGCCAGCACCAGACCTGCAGTTCAGGCTGAGAAAGAGGTTTTGAGCACTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424557.1
CDS CCA 90 bp AAGTGCTCAAAACCTCTTTCTCAGCCTGAACTGCAGGTCTGGTGCTaGCTCCTCAGACAGTATTTCAAACACAACCACACGGAGTCCAAC +
Preference number: 5 (lower is better)
Translates to: KCSKPLSQPELQVWC*LLRQYFKHNHTESN
Trigger: GTTGGACTCCGTGTGGTTGTGTTTGAAATACTGTCTGAGGAGCCAGCACCAGACCTGCAGTTCAGGCTGAGAAAGAGGTTTTGAGCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424557.1
CDS CCA 90 bp TCGCTTAAGTGCTCAAAACCTCTTTCTCAGCCTGAACTGCAGGTCTaGTGCTGGCTCCTCAGACAGTATTTCAAACACAACCACACGGAG +
Preference number: 5 (lower is better)
Translates to: SLKCSKPLSQPELQV*CWLLRQYFKHNHTE
Trigger: CTCCGTGTGGTTGTGTTTGAAATACTGTCTGAGGAGCCAGCACCAGACCTGCAGTTCAGGCTGAGAAAGAGGTTTTGAGCACTTAAGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424557.1
CDS-3UTR CAA 90 bp TCTTTGGCAGCTACTGTTGCTTGGACAGTCTTTACTCTTCCCCTTTTATTACGAGTCCCGTTTCCTCATTaGCAGAAAGGGGGCGGGAGC +
Preference number: 5 (lower is better)
Translates to: SLAATVAWTVFTLPLLLRVPFPH*QKGGGS
Trigger: GCTCCCGCCCCCTTTCTGCAAATGAGGAAACGGGAC...TCGTAATAAAAGGGGAAGAGTAAAGACTGTCCAAGCAACAGTAGCTGCCAAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000216214.7
CDS-3UTR CAA 90 bp TTAATAACACCATGTGTTGGCAAGATACAGGAAATGGATACTCCCACACTCAGCTGGAAGAAGCTGGGCTaGGCATCGCCTGTGCGAGGT +
Preference number: 5 (lower is better)
Translates to: LITPCVGKIQEMDTPTLSWKKLG*ASPVRG
Trigger: ACCTCGCACAGGCGATGCCAAGCCCAGCTTCTTCCA...GCTGAGTGTGGGAGTATCCATTTCCTGTATCTTGCCAACACATGGTGTTATTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405673.5
CDS-3UTR CAA 90 bp TTATCTGTACCTATGGGAGTCATCAATGGGGAGTGTCACAGGGCTTGGCAAGAAACTTCATGTGCCCTCTaGCCCATTCAAGGACCTTGG +
Preference number: 5 (lower is better)
Translates to: LSVPMGVINGECHRAWQETSCAL*PIQGPW
Trigger: CCAAGGTCCTTGAATGGGCAAGAGGGCACATGAAGT...TTCTTGCCAAGCCCTGTGACACTCCCCATTGATGACTCCCATAGGTACAGATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CAA 90 bp TCTTTGGCAGCTACTGTTGCTTGGACAGTCTTTACTCTTCCCCTTTTATTACGATCCTGCCCGCTTAAATaGGCCAGTCACCAGCCCTAC +
Preference number: 5 (lower is better)
Translates to: SLAATVAWTVFTLPLLLRSCPLK*ASHQPY
Trigger: GTAGGGCTGGTGACTGGCCAATTTAAGCGGGCAGGA...TCGTAATAAAAGGGGAAGAGTAAAGACTGTCCAAGCAACAGTAGCTGCCAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216214.7
CDS-3UTR CAA 90 bp ACGTGGAGTTCTCCATACATTCCTCTTCGTTTGGGCACTGTGGTTACAGAAGGCCATGACTTCTGCGTCTaGAGTGACGTCTTTATACCC +
Preference number: 5 (lower is better)
Translates to: TWSSPYIPLRLGTVVTEGHDFCV*SDVFIP
Trigger: GGGTATAAAGACGTCACTCAAGACGCAGAAGTCATG...GCCTTCTGTAACCACAGTGCCCAAACGAAGAGGAATGTATGGAGAACTCCACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CAA 90 bp ACATGCCCATGTGGCTCTCTTGGTGTATGTGACGGTTTCGCAATCAGAGATCCAATCAGCATCTGGGCTTaGCTGTTTGCAGATCTGAGT +
Preference number: 5 (lower is better)
Translates to: TCPCGSLGVCDGFAIRDPISIWA*LFADLS
Trigger: ACTCAGATCTGCAAACAGCAAAGCCCAGATGCTGAT...TGGATCTCTGATTGCGAAACCGTCACATACACCAAGAGAGCCACATGGGCATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS TCA 90 bp TGTGAATTATCCAAAATGCTTCCTAAGCCACCATTCCTCATCTCATaGGACTCATCAGGCTGGTTGGACTCTCGCTGTTCTACACGGGAC +
Preference number: 5 (lower is better)
Translates to: CELSKMLPKPPFLIS*DSSGWLDSRCSTRD
Trigger: GTCCCGTGTAGAACAGCGAGAGTCCAACCAGCCTGATGAGTCTCATGAGATGAGGAATGGTGGCTTAGGAAGCATTTTGGATAATTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424557.1
ENST00000452238.5
CDS-3UTR CAA 90 bp ACGTGGAGTTCTCCATACATTCCTCTTCGTTTGGGCACTGTGGTTACAGAAGGCACAAACAGAAAGGACTaGGTGCGGTATAAGTTCTGG +
Preference number: 5 (lower is better)
Translates to: TWSSPYIPLRLGTVVTEGTNRKD*VRYKFW
Trigger: CCAGAACTTATACCGCACCAAGTCCTTTCTGTTTGT...GCCTTCTGTAACCACAGTGCCCAAACGAAGAGGAATGTATGGAGAACTCCACGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CAA 90 bp TCTTTGGCAGCTACTGTTGCTTGGACAGTCTTTACTCTTCCCCTTTTATTACGAGCCCATGTGGCTCTCTaGGTGTATGTGACGGTTTCG +
Preference number: 5 (lower is better)
Translates to: SLAATVAWTVFTLPLLLRAHVAL*VYVTVS
Trigger: CGAAACCGTCACATACACCAAGAGAGCCACATGGGC...TCGTAATAAAAGGGGAAGAGTAAAGACTGTCCAAGCAACAGTAGCTGCCAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CAA 90 bp TTATCTGTACCTATGGGAGTCATCAATGGGGAGTGTCACAGGGCTTGGCAAGAAGCTATCCATCAGTCCTaGCAAAGTCCACCTGAAATG +
Preference number: 5 (lower is better)
Translates to: LSVPMGVINGECHRAWQEAIHQS*QSPPEM
Trigger: CATTTCAGGTGGACTTTGCAAGGACTGATGGATAGC...TTCTTGCCAAGCCCTGTGACACTCCCCATTGATGACTCCCATAGGTACAGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CAA 90 bp TTAACTTTATCTGTACCTATGGGAGTCATCAATGGGGAGTGTCACAGGGCTTGGGGAGTGTCACAGGGCTaGGCAAGAAATGTCACATTG +
Preference number: 5 (lower is better)
Translates to: LTLSVPMGVINGECHRAWGVSQG*ARNVTL
Trigger: CAATGTGACATTTCTTGCCAAGCCCTGTGACACTCC...CCAAGCCCTGTGACACTCCCCATTGATGACTCCCATAGGTACAGATAAAGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS CCA 90 bp GCTTTGCTGTTTGCAGATCTGAGTGGCAAGGTCTTGCACATATCCTaGAAAGTGGTCAAAACAGTCCCCGTAGGATACAACTTTGATTCC +
Preference number: 5 (lower is better)
Translates to: ALLFADLSGKVLHIS*KVVKTVPVGYNFDS
Trigger: GGAATCAAAGTTGTATCCTACGGGGACTGTTTTGACCACTTTCCAGGATATGTGCAAGACCTTGCCACTCAGATCTGCAAACAGCAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216214.7
ENST00000441876.7
ENST00000487732.5
CDS-3UTR CAA 90 bp ACATGCCCATGTGGCTCTCTTGGTGTATGTGACGGTTTCGCAATCAGAGATCCACTTATTACTCCTCCTTaGTCTGCCACTGAAGTCTTT +
Preference number: 5 (lower is better)
Translates to: TCPCGSLGVCDGFAIRDPLITPP*SATEVF
Trigger: AAAGACTTCAGTGGCAGACAAAGGAGGAGTAATAAG...TGGATCTCTGATTGCGAAACCGTCACATACACCAAGAGAGCCACATGGGCATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216214.7
CDS-3UTR CAA 90 bp ACAGAAAGACTGGATATTACCCCAGAGAATAAAGACTTGCAAAGCCTGGAACTTACAGGTCCCGGTCCTTaGTCACTTTCCTCCGGAACT +
Preference number: 5 (lower is better)
Translates to: TERLDITPENKDLQSLELTGPGP*SLSSGT
Trigger: AGTTCCGGAGGAAAGTGACAAAGGACCGGGACCTGT...AAGTTCCAGGCTTTGCAAGTCTTTATTCTCTGGGGTAATATCCAGTCTTTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CAA 90 bp TTAACTTTATCTGTACCTATGGGAGTCATCAATGGGGAGTGTCACAGGGCTTGGCTTTGGCAGCTACTGTaGCTTGGACAGTCTTTACTC +
Preference number: 5 (lower is better)
Translates to: LTLSVPMGVINGECHRAWLWQLL*LGQSLL
Trigger: GAGTAAAGACTGTCCAAGCAACAGTAGCTGCCAAAG...CCAAGCCCTGTGACACTCCCCATTGATGACTCCCATAGGTACAGATAAAGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CAA 90 bp TCTTTGGCAGCTACTGTTGCTTGGACAGTCTTTACTCTTCCCCTTTTATTACGAGGCAGCTACTGTTGCTaGGACAGTCTTTACTCTTCC +
Preference number: 5 (lower is better)
Translates to: SLAATVAWTVFTLPLLLRGSYCC*DSLYSS
Trigger: GGAAGAGTAAAGACTGTCCAAGCAACAGTAGCTGCC...TCGTAATAAAAGGGGAAGAGTAAAGACTGTCCAAGCAACAGTAGCTGCCAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CAA 90 bp AAAGACTTGCAAAGCCTGGAACTTATAATGTTTGAAACCTGGTCTCTCGAACTTGTGGCTGCAGTGAGCTaGAGATCGTACCACTGCACT +
Preference number: 5 (lower is better)
Translates to: KDLQSLELIMFETWSLELVAAVS*RSYHCT
Trigger: AGTGCAGTGGTACGATCTCAAGCTCACTGCAGCCAC...AAGTTCGAGAGACCAGGTTTCAAACATTATAAGTTCCAGGCTTTGCAAGTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CAA 90 bp ACGTGGAGTTCTCCATACATTCCTCTTCGTTTGGGCACTGTGGTTACAGAAGGCAGAAGGTTTAAAGTGTaGCAGGCCCTTTTCAAGTTT +
Preference number: 5 (lower is better)
Translates to: TWSSPYIPLRLGTVVTEGRRFKV*QALFKF
Trigger: AAACTTGAAAAGGGCCTGCAACACTTTAAACCTTCT...GCCTTCTGTAACCACAGTGCCCAAACGAAGAGGAATGTATGGAGAACTCCACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS GCA 90 bp ACAGTCCCCGTAGGATACAACTTTGATTCCGTGCAGAAGCATATCTaGCTGATGCTTAAAGAAATGGTCTTCATTCTCCTTCAGCACAAG +
Preference number: 5 (lower is better)
Translates to: TVPVGYNFDSVQKHI*LMLKEMVFILLQHK
Trigger: CTTGTGCTGAAGGAGAATGAAGACCATTTCTTTAAGCATCAGGCAGATATGCTTCTGCACGGAATCAAAGTTGTATCCTACGGGGACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216214.7
ENST00000441876.7
ENST00000459849.1
ENST00000476754.1
ENST00000487732.5
CDS-3UTR CAA 90 bp AAAGACTTGCAAAGCCTGGAACTTATAATGTTTGAAACCTGGTCTCTCGAACTTGCCCATTCAAGGACCTaGGTCTTGTCCTTCAAGTCC +
Preference number: 5 (lower is better)
Translates to: KDLQSLELIMFETWSLELAHSRT*VLSFKS
Trigger: GGACTTGAAGGACAAGACCAAGGTCCTTGAATGGGC...AAGTTCGAGAGACCAGGTTTCAAACATTATAAGTTCCAGGCTTTGCAAGTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CAA 90 bp TCTTTGGCAGCTACTGTTGCTTGGACAGTCTTTACTCTTCCCCTTTTATTACGATTTCGTATTTTCTCTTaGGCAGCTACTGTTGCTTGG +
Preference number: 5 (lower is better)
Translates to: SLAATVAWTVFTLPLLLRFRIFS*AATVAW
Trigger: CCAAGCAACAGTAGCTGCCAAAGAGAAAATACGAAA...TCGTAATAAAAGGGGAAGAGTAAAGACTGTCCAAGCAACAGTAGCTGCCAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CAA 90 bp CTGGATATTACCCCAGAGAATAAAGACTTGCAAAGCCTGGAACTTATAATGTTTACAAACAGAAAGGACTaGGTGCGGTATAAGTTCTGG +
Preference number: 5 (lower is better)
Translates to: LDITPENKDLQSLELIMFTNRKD*VRYKFW
Trigger: CCAGAACTTATACCGCACCAAGTCCTTTCTGTTTGT...AAACATTATAAGTTCCAGGCTTTGCAAGTCTTTATTCTCTGGGGTAATATCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CAA 90 bp AAAGACTTGCAAAGCCTGGAACTTATAATGTTTGAAACCTGGTCTCTCGAACTTTTTCGTATTTTCTCTTaGGCAGCTACTGTTGCTTGG +
Preference number: 5 (lower is better)
Translates to: KDLQSLELIMFETWSLELFRIFS*AATVAW
Trigger: CCAAGCAACAGTAGCTGCCAAAGAGAAAATACGAAA...AAGTTCGAGAGACCAGGTTTCAAACATTATAAGTTCCAGGCTTTGCAAGTCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS-3UTR CAA 90 bp CTGGATATTACCCCAGAGAATAAAGACTTGCAAAGCCTGGAACTTATAATGTTTAGAAGGTTTAAAGTGTaGCAGGCCCTTTTCAAGTTT +
Preference number: 5 (lower is better)
Translates to: LDITPENKDLQSLELIMFRRFKV*QALFKF
Trigger: AAACTTGAAAAGGGCCTGCAACACTTTAAACCTTCT...AAACATTATAAGTTCCAGGCTTTGCAAGTCTTTATTCTCTGGGGTAATATCCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS CCA 72 bp TGGTTCTCGGGGAGGGGACTGCGCAGGCACGCGGGCTaGCCCGGCGAGCCGCGCGTCCCGTTTCCTCATTTG +
Preference number: 6 (lower is better)
Translates to: WFSGRGLRRHAG*PGEPRVPFPHL
Trigger: CAAATGAGGAAACGGGACGCGCGGCTCGCCGGGCCAGCCCGCGTGCCTGCGCAGTCCCCTCCCCGAGAACCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000491671.1
CDS CAA 72 bp GGGAGGGGACTGCGCAGGCACGCGGGCTTGTCCGTCTaGTCCACTGGGGGTTCCCAGAAGCCAGCACGGCGC +
Preference number: 6 (lower is better)
Translates to: GRGLRRHAGLSV*STGGSQKPARR
Trigger: GCGCCGTGCTGGCTTCTGGGAACCCCCAGTGGACAAGACGGACAAGCCCGCGTGCCTGCGCAGTCCCCTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481447.1
CDS CAA 90 bp AGGCACGCGGGCTGGCCCGGCGAGCCGCGCGTCCCGTTTCCTCATTaGCAGAAAGGGGGCGGGAGCACTTTGCAGGGACGTGGCGAGCAT +
Preference number: 6 (lower is better)
Translates to: RHAGWPGEPRVPFPH*QKGGGSTLQGRGEH
Trigger: ATGCTCGCCACGTCCCTGCAAAGTGCTCCCGCCCCCTTTCTGCAAATGAGGAAACGGGACGCGCGGCTCGCCGGGCCAGCCCGCGTGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000491671.1
CDS CCA 72 bp ACTGCGCAGGCACGCGGGCTTGTCCGTCTTGTCCACTaGGGGTTCCCAGAAGCCAGCACGGCGCTGGGCACA +
Preference number: 6 (lower is better)
Translates to: TAQARGLVRLVH*GFPEASTALGT
Trigger: TGTGCCCAGCGCCGTGCTGGCTTCTGGGAACCCCCAGTGGACAAGACGGACAAGCCCGCGTGCCTGCGCAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481447.1
CDS GCA 72 bp GGCGACGTCTCCGGGGTGCAGCACCTCCAGCTGCTCTaGAGCCTCGATGACGGCCTCGATGCAGCTTCTCCA +
Preference number: 6 (lower is better)
Translates to: GDVSGVQHLQLL*SLDDGLDAASP
Trigger: TGGAGAAGCTGCATCGAGGCCGTCATCGAGGCTGCAGAGCAGCTGGAGGTGCTGCACCCCGGAGACGTCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216214.7
ENST00000405673.5
ENST00000427777.1
ENST00000441876.7
ENST00000477714.1
CDS CAA 72 bp AGCACGGCGCTGGGCACACCATGGCCGCCCACATGTTaGTGCGTGCGTGAGTGTCTTCCCCGCGCTCTTCCC +
Preference number: 6 (lower is better)
Translates to: STALGTPWPPTC*CVRECLPRALP
Trigger: GGGAAGAGCGCGGGGAAGACACTCACGCACGCACAAACATGTGGGCGGCCATGGTGTGCCCAGCGCCGTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216214.7
ENST00000481447.1
ENST00000491671.1
CDS TCA 72 bp GCCGAGACACCAAGAGCTCGTCCTCCTCGGCCACCCTaGGGCAGTGACTGGGAACGGCAGGGACTGGGAACA +
Preference number: 6 (lower is better)
Translates to: AETPRARPPRPP*GSDWERQGLGT
Trigger: TGTTCCCAGTCCCTGCCGTTCCCAGTCACTGCCTCAGGGTGGCCGAGGAGGACGAGCTCTTGGTGTCTCGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462361.1
CDS GCA 72 bp ACGGCGCTGGGCACACCATGGCCGCCCACATGTTTGTaGGTGCGTGAGTGTCTTCCCCGCGCTCTTCCCTCA +
Preference number: 6 (lower is better)
Translates to: TALGTPWPPTCL*VRECLPRALPS
Trigger: TGAGGGAAGAGCGCGGGGAAGACACTCACGCACGCACAAACATGTGGGCGGCCATGGTGTGCCCAGCGCCGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216214.7
ENST00000481447.1
ENST00000491671.1
CDS GCA 72 bp CCACGAGCAAAGGGCAGGGATTCCGGGGGCCACTGCTaGGCTGACGCCAGTCCCGATAACCAGGAGCAGTTC +
Preference number: 6 (lower is better)
Translates to: PRAKGRDSGGHC*ADASPDNQEQF
Trigger: GAACTGCTCCTGGTTATCGGGACTGGCGTCAGCGCAGCAGTGGCCCCCGGAATCCCTGCCCTTTGCTCGTGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216214.7
ENST00000405673.5
ENST00000427777.1
ENST00000441876.7
ENST00000477714.1
CDS GCA 72 bp AACTCGGCGACGTCTCCGGGGTGCAGCACCTCCAGCTaGTCTGCAGCCTCGATGACGGCCTCGATGCAGCTT +
Preference number: 6 (lower is better)
Translates to: NSATSPGCSTSS*SAASMTASMQL
Trigger: AAGCTGCATCGAGGCCGTCATCGAGGCTGCAGAGCAGCTGGAGGTGCTGCACCCCGGAGACGTCGCCGAGTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216214.7
ENST00000405673.5
ENST00000427777.1
ENST00000441876.7
ENST00000477714.1
CDS GCA 72 bp GTCACTTTCCTCCGGAACTCGGCGACGTCTCCGGGGTaGAGCACCTCCAGCTGCTCTGCAGCCTCGATGACG +
Preference number: 6 (lower is better)
Translates to: VTFLRNSATSPG*STSSCSAASMT
Trigger: CGTCATCGAGGCTGCAGAGCAGCTGGAGGTGCTGCACCCCGGAGACGTCGCCGAGTTCCGGAGGAAAGTGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216214.7
ENST00000405673.5
ENST00000427777.1
ENST00000441876.7
ENST00000477714.1
CDS CCA 72 bp GCCGCCGGCCAAAGGCCTCCAGCAGGTTGTCATAGTTaGTGGTCAGGACCATGGCGCCCCTGTCCATCAGGC +
Preference number: 6 (lower is better)
Translates to: AAGQRPPAGCHS*WSGPWRPCPSG
Trigger: GCCTGATGGACAGGGGCGCCATGGTCCTGACCACCAACTATGACAACCTGCTGGAGGCCTTTGGCCGGCGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216214.7
ENST00000405673.5
ENST00000441876.7
ENST00000477714.1
CDS CAA 72 bp CTCCCACTTCCCCTGAGAGCCGGTACCTTGTCCGTCTaGTCCACTGGGGGTTCCCAGAAGCCAGCACGGCGC +
Preference number: 6 (lower is better)
Translates to: LPLPLRAGTLSV*STGGSQKPARR
Trigger: GCGCCGTGCTGGCTTCTGGGAACCCCCAGTGGACAAGACGGACAAGGTACCGGCTCTCAGGGGAAGTGGGAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000491671.1
CDS GCA 72 bp GCACCTACCTTGTGGGTATTGCGAGGACTGAGATTGTaGGTGGGTGGGCTGGGCACGGGCCCCCTAGCGATC +
Preference number: 6 (lower is better)
Translates to: APTLWVLRGLRL*VGGLGTGPLAI
Trigger: GATCGCTAGGGGGCCCGTGCCCAGCCCACCCACGCACAATCTCAGTCCTCGCAATACCCACAAGGTAGGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216214.7
CDS CAA 72 bp CTAGCACCTACCTTGTGGGTATTGCGAGGACTGAGATaGTGCGTGGGTGGGCTGGGCACGGGCCCCCTAGCG +
Preference number: 6 (lower is better)
Translates to: LAPTLWVLRGLR*CVGGLGTGPLA
Trigger: CGCTAGGGGGCCCGTGCCCAGCCCACCCACGCACAATCTCAGTCCTCGCAATACCCACAAGGTAGGTGCTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216214.7
CDS CAA 90 bp GCCGCGTCCGTAAAGGGTGTGATCCTAGCACCTACCTTGTGGGTATaGCGAGGACTGAGATTGTGCGTGGGTGGGCTGGGCACGGGCCCC +
Preference number: 6 (lower is better)
Translates to: AASVKGVILAPTLWV*RGLRLCVGGLGTGP
Trigger: GGGGCCCGTGCCCAGCCCACCCACGCACAATCTCAGTCCTCGCAATACCCACAAGGTAGGTGCTAGGATCACACCCTTTACGGACGCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216214.7
CDS CAA 90 bp CCAGAAGCCAGCACGGCGCTGGGCACACCATGGCCGCCCACATGTTaGTGCGTGCGTGAGTGTCTTCCCCGCGCTCTTCCCTCATCAAGA +
Preference number: 6 (lower is better)
Translates to: PEASTALGTPWPPTC*CVRECLPRALPSSR
Trigger: TCTTGATGAGGGAAGAGCGCGGGGAAGACACTCACGCACGCACAAACATGTGGGCGGCCATGGTGTGCCCAGCGCCGTGCTGGCTTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216214.7
ENST00000481447.1
ENST00000491671.1
CDS CAA 90 bp CCGCGCGTCCCGTTTCCTCATTTGCAGAAAGGGGGCGGGAGCACTTaGCAGGGACGTGGCGAGCATCAAGTGCGATCGGAAGCGCTCCTT +
Preference number: 6 (lower is better)
Translates to: PRVPFPHLQKGGGST*QGRGEHQVRSEALL
Trigger: AAGGAGCGCTTCCGATCGCACTTGATGCTCGCCACGTCCCTGCAAAGTGCTCCCGCCCCCTTTCTGCAAATGAGGAAACGGGACGCGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000491671.1
CDS TCA 72 bp TGGTGGTCAGGACCATGGCGCCCCTGTCCATCAGGCTaGGGATCGACTGCAGCACCACAGGACTCCGGATGT +
Preference number: 6 (lower is better)
Translates to: WWSGPWRPCPSG*GSTAAPQDSGC
Trigger: ACATCCGGAGTCCTGTGGTGCTGCAGTCGATCCTCAGCCTGATGGACAGGGGCGCCATGGTCCTGACCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216214.7
ENST00000405673.5
ENST00000441876.7
ENST00000477714.1
CDS GCA 72 bp GTCCACGCGATCAGCATCTCTACCTCCCAGGCTTGGTaGGAGGACTCGCTGAAGGAGCCAGCTGGCAAAGGC +
Preference number: 6 (lower is better)
Translates to: VHAISISTSQAW*EDSLKEPAGKG
Trigger: GCCTTTGCCAGCTGGCTCCTTCAGCGAGTCCTCGCACCAAGCCTGGGAGGTAGAGATGCTGATCGCGTGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483102.5
CDS CAA 90 bp GTCGCAGGTGCCGCGTCCGTAAAGGGTGTGATCCTAGCACCTACCTaGTGGGTATTGCGAGGACTGAGATTGTGCGTGGGTGGGCTGGGC +
Preference number: 6 (lower is better)
Translates to: VAGAASVKGVILAPT*WVLRGLRLCVGGLG
Trigger: GCCCAGCCCACCCACGCACAATCTCAGTCCTCGCAATACCCACAAGGTAGGTGCTAGGATCACACCCTTTACGGACGCGGCACCTGCGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216214.7
CDS TCA 72 bp GCATCTCTACCTCCCAGGCTTGGTGCGAGGACTCGCTaGAGGAGCCAGCTGGCAAAGGCAGCATGGTGTGGT +
Preference number: 6 (lower is better)
Translates to: ASLPPRLGARTR*RSQLAKAAWCG
Trigger: ACCACACCATGCTGCCTTTGCCAGCTGGCTCCTTCAGCGAGTCCTCGCACCAAGCCTGGGAGGTAGAGATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483102.5
CDS TCA 72 bp AGGCTGAGAATTTCTCCTTGTGGGTATTGCGAGGACTaGGATTGTGCGTGGGTGGGCTGGGCACGGGCCCCC +
Preference number: 6 (lower is better)
Translates to: RLRISPCGYCED*DCAWVGWARAP
Trigger: GGGGGCCCGTGCCCAGCCCACCCACGCACAATCTCAGTCCTCGCAATACCCACAAGGAGAAATTCTCAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491671.1
CDS GCA 72 bp AGACCTGAGGCTGGTCTCCGTCCCCCAGCAGACTCCTaGCCGCTTAAATTGGCCAGTCACCAGCCCTACCTT +
Preference number: 6 (lower is better)
Translates to: RPEAGLRPPADS*PLKLASHQPYL
Trigger: AAGGTAGGGCTGGTGACTGGCCAATTTAAGCGGGCAGGAGTCTGCTGGGGGACGGAGACCAGCCTCAGGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000491671.1
CDS GCA 72 bp GCGGGAGCACTTTGCAGGGACGTGGCGAGCATCAAGTaGGATCGGAAGCGCTCCTTTGCAACTGCATCCTGC +
Preference number: 6 (lower is better)
Translates to: AGALCRDVASIK*DRKRSFATASC
Trigger: GCAGGATGCAGTTGCAAAGGAGCGCTTCCGATCGCACTTGATGCTCGCCACGTCCCTGCAAAGTGCTCCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000491671.1
CDS CCA 72 bp ATGTGGCTCAGACGCAGAGAGCAGATGTCTACTCCATaGCACTACCGGCAGGAGTGGGTGCCTTGGCCCTGC +
Preference number: 6 (lower is better)
Translates to: MWLRRREQMSTP*HYRQEWVPWPC
Trigger: GCAGGGCCAAGGCACCCACTCCTGCCGGTAGTGCCATGGAGTAGACATCTGCTCTCTGCGTCTGAGCCACAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000459849.1
ENST00000476754.1
CDS CCA 72 bp GCTGTCCACGCGATCAGCATCTCTACCTCCCAGGCTTaGTGCGAGGACTCGCTGAAGGAGCCAGCTGGCAAA +
Preference number: 6 (lower is better)
Translates to: AVHAISISTSQA*CEDSLKEPAGK
Trigger: TTTGCCAGCTGGCTCCTTCAGCGAGTCCTCGCACCAAGCCTGGGAGGTAGAGATGCTGATCGCGTGGACAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483102.5
CDS CAA 72 bp TGTGACTGGCTCCCACTTCCCCTGAGAGCCGGTACCTaGTCCGTCTTGTCCACTGGGGGTTCCCAGAAGCCA +
Preference number: 6 (lower is better)
Translates to: CDWLPLPLRAGT*SVLSTGGSQKP
Trigger: TGGCTTCTGGGAACCCCCAGTGGACAAGACGGACAAGGTACCGGCTCTCAGGGGAAGTGGGAGCCAGTCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000491671.1
CDS CAA 72 bp TGCTGTCCACGCGATCAGCATCTCTACCTCCCAGGCTaGGTGCGAGGACTCGCTGAAGGAGCCAGCTGGCAA +
Preference number: 6 (lower is better)
Translates to: CCPRDQHLYLPG*VRGLAEGASWQ
Trigger: TTGCCAGCTGGCTCCTTCAGCGAGTCCTCGCACCAAGCCTGGGAGGTAGAGATGCTGATCGCGTGGACAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483102.5
CDS CAA 72 bp GAGAATTTCTCCTTGTGGGTATTGCGAGGACTGAGATaGTGCGTGGGTGGGCTGGGCACGGGCCCCCTAGCG +
Preference number: 6 (lower is better)
Translates to: ENFSLWVLRGLR*CVGGLGTGPLA
Trigger: CGCTAGGGGGCCCGTGCCCAGCCCACCCACGCACAATCTCAGTCCTCGCAATACCCACAAGGAGAAATTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491671.1
CDS CAA 90 bp TCTTCCGGATCAGATCATGGGCGACAACCAACAGGTCCCGGTCCTTaGTCACTTTCCTCCGGAACTCGGCGACGTCTCCGGGGTGCAGCA +
Preference number: 6 (lower is better)
Translates to: SSGSDHGRQPTGPGP*SLSSGTRRRLRGAA
Trigger: TGCTGCACCCCGGAGACGTCGCCGAGTTCCGGAGGAAAGTGACAAAGGACCGGGACCTGTTGGTTGTCGCCCATGATCTGATCCGGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216214.7
ENST00000405673.5
ENST00000427777.1
ENST00000441876.7
ENST00000477714.1
CDS TCA 72 bp GGGCACACCATGGCCGCCCACATGTTTGTGCGTGCGTaGGTGTCTTCCCCGCGCTCTTCCCTCATCAAGAAA +
Preference number: 6 (lower is better)
Translates to: GHTMAAHMFVRA*VSSPRSSLIKK
Trigger: TTTCTTGATGAGGGAAGAGCGCGGGGAAGACACTCACGCACGCACAAACATGTGGGCGGCCATGGTGTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216214.7
ENST00000481447.1
ENST00000491671.1
CDS GCA 72 bp AGGATCGACTGCAGCACCACAGGACTCCGGATGTGCTaGTCCAGGTCGTCAAACACCTCCATCAGGCAGTCC +
Preference number: 6 (lower is better)
Translates to: RIDCSTTGLRMC*SRSSNTSIRQS
Trigger: GGACTGCCTGATGGAGGTGTTTGACGACCTGGAGCAGCACATCCGGAGTCCTGTGGTGCTGCAGTCGATCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216214.7
ENST00000405673.5
ENST00000427777.1
ENST00000441876.7
ENST00000477714.1
CDS GCA 72 bp CTGAGGATCGACTGCAGCACCACAGGACTCCGGATGTaGTGCTCCAGGTCGTCAAACACCTCCATCAGGCAG +
Preference number: 6 (lower is better)
Translates to: LRIDCSTTGLRM*CSRSSNTSIRQ
Trigger: CTGCCTGATGGAGGTGTTTGACGACCTGGAGCAGCACATCCGGAGTCCTGTGGTGCTGCAGTCGATCCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216214.7
ENST00000405673.5
ENST00000427777.1
ENST00000441876.7
ENST00000477714.1
CDS GCA 72 bp AATTTCTCCTTGTGGGTATTGCGAGGACTGAGATTGTaGGTGGGTGGGCTGGGCACGGGCCCCCTAGCGATC +
Preference number: 6 (lower is better)
Translates to: NFSLWVLRGLRL*VGGLGTGPLAI
Trigger: GATCGCTAGGGGGCCCGTGCCCAGCCCACCCACGCACAATCTCAGTCCTCGCAATACCCACAAGGAGAAATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491671.1
CDS CCA 72 bp TGCTCCAGGTCGTCAAACACCTCCATCAGGCAGTCCTaGAAGAAGCTGGGCTTGGCATCGCCTGTGCGAGGT +
Preference number: 6 (lower is better)
Translates to: CSRSSNTSIRQS*KKLGLASPVRG
Trigger: ACCTCGCACAGGCGATGCCAAGCCCAGCTTCTTCCAGGACTGCCTGATGGAGGTGTTTGACGACCTGGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216214.7
ENST00000405673.5
ENST00000427777.1
ENST00000441876.7
ENST00000477714.1
CDS CAA 72 bp TCAGATCATGGGCGACAACCAACAGGTCCCGGTCCTTaGTCACTTTCCTCCGGAACTCGGCGACGTCTCCGG +
Preference number: 6 (lower is better)
Translates to: SDHGRQPTGPGP*SLSSGTRRRLR
Trigger: CCGGAGACGTCGCCGAGTTCCGGAGGAAAGTGACAAAGGACCGGGACCTGTTGGTTGTCGCCCATGATCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216214.7
ENST00000405673.5
ENST00000427777.1
ENST00000441876.7
ENST00000477714.1
CDS CAA 90 bp GGTGTGATCCTAGCACCTACCTTGTGGGTATTGCGAGGACTGAGATaGTGCGTGGGTGGGCTGGGCACGGGCCCCCTAGCGATCTTATTA +
Preference number: 6 (lower is better)
Translates to: GVILAPTLWVLRGLR*CVGGLGTGPLAILL
Trigger: TAATAAGATCGCTAGGGGGCCCGTGCCCAGCCCACCCACGCACAATCTCAGTCCTCGCAATACCCACAAGGTAGGTGCTAGGATCACACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216214.7
CDS CAA 90 bp TTTGCAGGGACGTGGCGAGCATCAAGTGCGATCGGAAGCGCTCCTTaGCAACTGCATCCTGCACCACACTTAGGCACAGCTTCTGTCCCC +
Preference number: 6 (lower is better)
Translates to: FAGTWRASSAIGSAP*QLHPAPHLGTASVP
Trigger: GGGGACAGAAGCTGTGCCTAAGTGTGGTGCAGGATGCAGTTGCAAAGGAGCGCTTCCGATCGCACTTGATGCTCGCCACGTCCCTGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000491671.1
CDS CAA 90 bp CCCGAGGCTGAGAATTTCTCCTTGTGGGTATTGCGAGGACTGAGATaGTGCGTGGGTGGGCTGGGCACGGGCCCCCTAGCGATCTTATTA +
Preference number: 6 (lower is better)
Translates to: PEAENFSLWVLRGLR*CVGGLGTGPLAILL
Trigger: TAATAAGATCGCTAGGGGGCCCGTGCCCAGCCCACCCACGCACAATCTCAGTCCTCGCAATACCCACAAGGAGAAATTCTCAGCCTCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491671.1
CDS GCA 72 bp CGTTTCCTCATTTGCAGAAAGGGGGCGGGAGCACTTTaGAGGGACGTGGCGAGCATCAAGTGCGATCGGAAG +
Preference number: 6 (lower is better)
Translates to: RFLICRKGAGAL*RDVASIKCDRK
Trigger: CTTCCGATCGCACTTGATGCTCGCCACGTCCCTGCAAAGTGCTCCCGCCCCCTTTCTGCAAATGAGGAAACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000491671.1
CDS GCA 72 bp CAGTGGAGTCCGGGGGAATCACAACGGAGAATCCCATaGCAAAACTCCCGCGAGCATGAGGATGGCACAGAC +
Preference number: 6 (lower is better)
Translates to: QWSPGESQRRIP*QNSREHEDGTD
Trigger: GTCTGTGCCATCCTCATGCTCGCGGGAGTTTTGGCATGGGATTCTCCGTTGTGATTCCCCCGGACTCCACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479180.1
CDS CCA 72 bp CTTGTGGGTATTGCGAGGACTGAGATTGTGCGTGGGTaGGCTGGGCACGGGCCCCCTAGCGATCTTATTACT +
Preference number: 6 (lower is better)
Translates to: LVGIARTEIVRG*AGHGPPSDLIT
Trigger: AGTAATAAGATCGCTAGGGGGCCCGTGCCCAGCCCACCCACGCACAATCTCAGTCCTCGCAATACCCACAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000491671.1
CDS CCA 72 bp CGTCAAACACCTCCATCAGGCAGTCCTGGAAGAAGCTaGGCTTGGCATCGCCTGTGCGAGGTGACATCTTCC +
Preference number: 6 (lower is better)
Translates to: RQTPPSGSPGRS*AWHRLCEVTSS
Trigger: GGAAGATGTCACCTCGCACAGGCGATGCCAAGCCCAGCTTCTTCCAGGACTGCCTGATGGAGGTGTTTGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216214.7
ENST00000405673.5
ENST00000427777.1
ENST00000441876.7
ENST00000477714.1
CDS CAA 72 bp CCGTTTCCTCATTTGCAGAAAGGGGGCGGGAGCACTTaGCAGGGACGTGGCGAGCATCAAGTGCGATCGGAA +
Preference number: 6 (lower is better)
Translates to: PFPHLQKGGGST*QGRGEHQVRSE
Trigger: TTCCGATCGCACTTGATGCTCGCCACGTCCCTGCAAAGTGCTCCCGCCCCCTTTCTGCAAATGAGGAAACGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000491671.1
CDS CAA 72 bp CTCTTCCCCGAGGCTGAGAATTTCTCCTTGTGGGTATaGCGAGGACTGAGATTGTGCGTGGGTGGGCTGGGC +
Preference number: 6 (lower is better)
Translates to: LFPEAENFSLWV*RGLRLCVGGLG
Trigger: GCCCAGCCCACCCACGCACAATCTCAGTCCTCGCAATACCCACAAGGAGAAATTCTCAGCCTCGGGGAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491671.1
CDS TCA 72 bp ACAAACACCAACAGCCCTGCTGCCATCACTGGGCGGTaGGCCAGCTGGCAGTTCTGTTTATGCAACTGGCTG +
Preference number: 6 (lower is better)
Translates to: TNTNSPAAITGR*ASWQFCLCNWL
Trigger: CAGCCAGTTGCATAAACAGAACTGCCAGCTGGCTCACCGCCCAGTGATGGCAGCAGGGCTGTTGGTGTTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000459849.1
ENST00000476754.1
CDS TCA 72 bp AAAGGCAGCATGGTGTGGTGTCCGCGATCACTAGCATaGCTGTCACTGTCATGGGCCTCCTCTCCCATCAGG +
Preference number: 6 (lower is better)
Translates to: KGSMVWCPRSLA*LSLSWASSPIR
Trigger: CCTGATGGGAGAGGAGGCCCATGACAGTGACAGTCATGCTAGTGATCGCGGACACCACACCATGCTGCCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483102.5
CDS GCA 72 bp AAGTGCGATCGGAAGCGCTCCTTTGCAACTGCATCCTaGACCACACTTAGGCACAGCTTCTGTCCCCAACCC +
Preference number: 6 (lower is better)
Translates to: KCDRKRSFATAS*TTLRHSFCPQP
Trigger: GGGTTGGGGACAGAAGCTGTGCCTAAGTGTGGTGCAGGATGCAGTTGCAAAGGAGCGCTTCCGATCGCACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000491671.1
CDS CCA 72 bp TCGCCTGTGCGAGGTGACATCTTCCGGATCAGATCATaGGCGACAACCAACAGGTCCCGGTCCTTTGTCACT +
Preference number: 6 (lower is better)
Translates to: SPVRGDIFRIRS*ATTNRSRSFVT
Trigger: AGTGACAAAGGACCGGGACCTGTTGGTTGTCGCCCATGATCTGATCCGGAAGATGTCACCTCGCACAGGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216214.7
ENST00000405673.5
ENST00000427777.1
ENST00000441876.7
ENST00000477714.1
CDS CCA 72 bp AACTGGCTGTCTGTTTCCAACAGCAAGCCCCAGCAGTaGGGACCATGTGGCTCAGACGCAGAGAGCAGATGT +
Preference number: 6 (lower is better)
Translates to: NWLSVSNSKPQQ*GPCGSDAESRC
Trigger: ACATCTGCTCTCTGCGTCTGAGCCACATGGTCCCCACTGCTGGGGCTTGCTGTTGGAAACAGACAGCCAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459849.1
ENST00000476754.1
CDS CAA 72 bp GTAAAGGGTGTGATCCTAGCACCTACCTTGTGGGTATaGCGAGGACTGAGATTGTGCGTGGGTGGGCTGGGC +
Preference number: 6 (lower is better)
Translates to: VKGVILAPTLWV*RGLRLCVGGLG
Trigger: GCCCAGCCCACCCACGCACAATCTCAGTCCTCGCAATACCCACAAGGTAGGTGCTAGGATCACACCCTTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216214.7
CDS CAA 72 bp GCCGCGTCCGTAAAGGGTGTGATCCTAGCACCTACCTaGTGGGTATTGCGAGGACTGAGATTGTGCGTGGGT +
Preference number: 6 (lower is better)
Translates to: AASVKGVILAPT*WVLRGLRLCVG
Trigger: ACCCACGCACAATCTCAGTCCTCGCAATACCCACAAGGTAGGTGCTAGGATCACACCCTTTACGGACGCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216214.7
CDS TCA 72 bp CTAATTAGGACGGGCCGTACCATGACTTCTGCGTCTTaGGTGACGTCTTTATACCCCGATGGGTCCAGCACC +
Preference number: 6 (lower is better)
Translates to: LIRTGRTMTSAS*VTSLYPDGSST
Trigger: GGTGCTGGACCCATCGGGGTATAAAGACGTCACTCAAGACGCAGAAGTCATGGTACGGCCCGTCCTAATTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476754.1
CDS GCA 72 bp CTCCCCAGTAGCGGGGACTGCAGGCAGGCGCCACCATaGCTGGCTACTTTATTAGTAATTCACTGCTACAAA +
Preference number: 6 (lower is better)
Translates to: LPSSGDCRQAPP*LATLLVIHCYK
Trigger: TTTGTAGCAGTGAATTACTAATAAAGTAGCCAGGCATGGTGGCGCCTGCCTGCAGTCCCCGCTACTGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405673.5
CDS CCA 72 bp TACTTGTCACTCTCCGAAATTAGGTACGCTTGTGACTaGCTCCCACTTCCCCTGAGAGCCGGTACCTTGTCC +
Preference number: 6 (lower is better)
Translates to: YLSLSEIRYACD*LPLPLRAGTLS
Trigger: GGACAAGGTACCGGCTCTCAGGGGAAGTGGGAGCCAGTCACAAGCGTACCTAATTTCGGAGAGTGACAAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000491671.1
CDS CCA 72 bp AATGGACACAAACACCAACAGCCCTGCTGCCATCACTaGGCGGTGAGCCAGCTGGCAGTTCTGTTTATGCAA +
Preference number: 6 (lower is better)
Translates to: NGHKHQQPCCHH*AVSQLAVLFMQ
Trigger: TTGCATAAACAGAACTGCCAGCTGGCTCACCGCCCAGTGATGGCAGCAGGGCTGTTGGTGTTTGTGTCCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000459849.1
ENST00000476754.1
CDS CAA 72 bp CGTGAATGTGGAGGACGCCGTACTTCATGTGCCCTCTaGCCCATTCAAGGACCTTACAAAGATGCCCATCGG +
Preference number: 6 (lower is better)
Translates to: RECGGRRTSCAL*PIQGPYKDAHR
Trigger: CCGATGGGCATCTTTGTAAGGTCCTTGAATGGGCAAGAGGGCACATGAAGTACGGCGTCCTCCACATTCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000459849.1
ENST00000476754.1
CDS CAA 72 bp CGAAGGGTCTCCCCACAGCCCACAAACAGAAAGGACTaGGTGCGGTATAAGTTCTGGAGGACTTCCGATGCT +
Preference number: 6 (lower is better)
Translates to: RRVSPQPTNRKD*VRYKFWRTSDA
Trigger: AGCATCGGAAGTCCTCCAGAACTTATACCGCACCAAGTCCTTTCTGTTTGTGGGCTGTGGGGAGACCCTTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476754.1
CDS CAA 90 bp TTCCCTCATCAAGAAATACTCTTCCCCGAGGCTGAGAATTTCTCCTaGTGGGTATTGCGAGGACTGAGATTGTGCGTGGGTGGGCTGGGC +
Preference number: 6 (lower is better)
Translates to: FPHQEILFPEAENFS*WVLRGLRLCVGGLG
Trigger: GCCCAGCCCACCCACGCACAATCTCAGTCCTCGCAATACCCACAAGGAGAAATTCTCAGCCTCGGGGAAGAGTATTTCTTGATGAGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491671.1
CDS GCA 72 bp GTGAATGTGGAGGACGCCGTACTTCATGTGCCCTCTTaGCCATTCAAGGACCTTGGTCTTGTCCTTCAAGTC +
Preference number: 6 (lower is better)
Translates to: VNVEDAVLHVPS*PFKDLGLVLQV
Trigger: GACTTGAAGGACAAGACCAAGGTCCTTGAATGGGCAAGAGGGCACATGAAGTACGGCGTCCTCCACATTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS GCA 72 bp GTGAATGTGGAGGACGCCGTACTTCATGTGCCCTCTTaGCCATTCAAGGACCATGTGTTGGCAAGATACAGG +
Preference number: 6 (lower is better)
Translates to: VNVEDAVLHVPS*PFKDHVLARYR
Trigger: CCTGTATCTTGCCAACACATGGTCCTTGAATGGGCAAGAGGGCACATGAAGTACGGCGTCCTCCACATTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476478.1
CDS CCA 72 bp GCGCTGACGCCAGTCCCGATAACCAGGAGCAGTTCCTaGGGCTGTTTCCGGATGAGGCTTTTTAAAAACTTT +
Preference number: 6 (lower is better)
Translates to: ALTPVPITRSSS*GCFRMRLFKNF
Trigger: AAAGTTTTTAAAAAGCCTCATCCGGAAACAGCCCCAGGAACTGCTCCTGGTTATCGGGACTGGCGTCAGCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000216214.7
ENST00000405673.5
ENST00000427777.1
ENST00000441876.7
ENST00000477714.1
CDS CCA 72 bp CACCATTCCTCATCTCATGAGACTCATCAGGCTGGTTaGACTCTCGCTGTTCTACACGGGACAGCACAGAAG +
Preference number: 6 (lower is better)
Translates to: HHSSSHETHQAG*TLAVLHGTAQK
Trigger: CTTCTGTGCTGTCCCGTGTAGAACAGCGAGAGTCCAACCAGCCTGATGAGTCTCATGAGATGAGGAATGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424557.1
ENST00000452238.5
CDS CCA 72 bp GAAATACTCTTCCCCGAGGCTGAGAATTTCTCCTTGTaGGTATTGCGAGGACTGAGATTGTGCGTGGGTGGG +
Preference number: 6 (lower is better)
Translates to: EILFPEAENFSL*VLRGLRLCVGG
Trigger: CCCACCCACGCACAATCTCAGTCCTCGCAATACCCACAAGGAGAAATTCTCAGCCTCGGGGAAGAGTATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481447.1
ENST00000491671.1
CDS CAA 72 bp CGTGAATGTGGAGGACGCCGTACTTCATGTGCCCTCTaGCCCATTCAAGGACCTTGGTCTTGTCCTTCAAGT +
Preference number: 6 (lower is better)
Translates to: RECGGRRTSCAL*PIQGPWSCPSS
Trigger: ACTTGAAGGACAAGACCAAGGTCCTTGAATGGGCAAGAGGGCACATGAAGTACGGCGTCCTCCACATTCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216214.7
ENST00000441876.7
CDS CAA 72 bp CGAAGGGTCTCCCCACAGCCCACAAACAGAAAGGACTaGGTGCGGTATAAGTTCTGGAGGACTTCCATGACT +
Preference number: 6 (lower is better)
Translates to: RRVSPQPTNRKD*VRYKFWRTSMT
Trigger: AGTCATGGAAGTCCTCCAGAACTTATACCGCACCAAGTCCTTTCTGTTTGTGGGCTGTGGGGAGACCCTTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216214.7
ENST00000441876.7
ENST00000459849.1
ENST00000487732.5
CDS CAA 72 bp CGTGAATGTGGAGGACGCCGTACTTCATGTGCCCTCTaGCCCATTCAAGGACCATGTGTTGGCAAGATACAG +
Preference number: 6 (lower is better)
Translates to: RECGGRRTSCAL*PIQGPCVGKIQ
Trigger: CTGTATCTTGCCAACACATGGTCCTTGAATGGGCAAGAGGGCACATGAAGTACGGCGTCCTCCACATTCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476478.1
CDS CAA 72 bp CGTGAATGTGGAGGACGCCGTACTTCATGTGCCCTCTaGCCCATTCAAGGACCTACCAAACATCAAGCCAAG +
Preference number: 6 (lower is better)
Translates to: RECGGRRTSCAL*PIQGPTKHQAK
Trigger: CTTGGCTTGATGTTTGGTAGGTCCTTGAATGGGCAAGAGGGCACATGAAGTACGGCGTCCTCCACATTCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487732.5
CDS CAA 90 bp TGTAGAGGCCGTGAATGTGGAGGACGCCGTACTTCATGTGCCCTCTaGCCCATTCAAGGACCATGTGTTGGCAAGATACAGGAAATGGAT +
Preference number: 6 (lower is better)
Translates to: CRGRECGGRRTSCAL*PIQGPCVGKIQEMD
Trigger: ATCCATTTCCTGTATCTTGCCAACACATGGTCCTTGAATGGGCAAGAGGGCACATGAAGTACGGCGTCCTCCACATTCACGGCCTCTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476478.1
CDS TCA 72 bp ACGCGATCAGCATCTGGGCTTTGCTGTTTGCAGATCTaGGTGGCAAGGTCTTGCACATATCCTGGAAAGTGG +
Preference number: 6 (lower is better)
Translates to: TRSASGLCCLQI*VARSCTYPGKW
Trigger: CCACTTTCCAGGATATGTGCAAGACCTTGCCACTCAGATCTGCAAACAGCAAAGCCCAGATGCTGATCGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216214.7
ENST00000441876.7
ENST00000487732.5
CDS GCA 72 bp GCGCCACCATGCCTGGCTACTTTATTAGTAATTCACTaGTACAAAGTGAGAGCAGCTCCCAGGGCACAGAAC +
Preference number: 6 (lower is better)
Translates to: APPCLATLLVIH*YKVRAAPRAQN
Trigger: GTTCTGTGCCCTGGGAGCTGCTCTCACTTTGTAGCAGTGAATTACTAATAAAGTAGCCAGGCATGGTGGCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405673.5
CDS GCA 72 bp GGGTCTCCCCACAGCCCACAAACAGAAAGGACTTGGTaGGGTATAAGTTCTGGAGGACTTCCGATGCTAATT +
Preference number: 6 (lower is better)
Translates to: GSPHSPQTERTW*GISSGGLPMLI
Trigger: AATTAGCATCGGAAGTCCTCCAGAACTTATACCGCACCAAGTCCTTTCTGTTTGTGGGCTGTGGGGAGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476754.1
CDS CAA 72 bp GGGCACGGGCCCCCTAGCGATCTTATTACTCCTCCTTaGTCTGCCACTGAAGTCTTTTACCTAAACAAGACC +
Preference number: 6 (lower is better)
Translates to: GHGPPSDLITPP*SATEVFYLNKT
Trigger: GGTCTTGTTTAGGTAAAAGACTTCAGTGGCAGACAAAGGAGGAGTAATAAGATCGCTAGGGGGCCCGTGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491671.1
CDS TCA 72 bp TATAAGTTCTGGAGGACTTCCATGACTTCTGCGTCTTaGGTGACGTCTTTATACCCCGATGGGTCCAGCACC +
Preference number: 6 (lower is better)
Translates to: YKFWRTSMTSAS*VTSLYPDGSST
Trigger: GGTGCTGGACCCATCGGGGTATAAAGACGTCACTCAAGACGCAGAAGTCATGGAAGTCCTCCAGAACTTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216214.7
ENST00000441876.7
ENST00000459849.1
ENST00000487732.5
CDS CCA 72 bp ACTGTCACTGTCATGGGCCTCCTCTCCCATCAGGAGTaGCACTCCATGAATTCGAGTACAAATGTCCTTCAT +
Preference number: 6 (lower is better)
Translates to: TVTVMGLLSHQE*HSMNSSTNVLH
Trigger: ATGAAGGACATTTGTACTCGAATTCATGGAGTGCCACTCCTGATGGGAGAGGAGGCCCATGACAGTGACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483102.5
CDS CAA 72 bp TGGGCTTTGCTGTTTGCAGATCTGAGTGGCAAGGTCTaGCACATATCCTGGAAAGTGGTCAAAACAGTCCCC +
Preference number: 6 (lower is better)
Translates to: WALLFADLSGKV*HISWKVVKTVP
Trigger: GGGGACTGTTTTGACCACTTTCCAGGATATGTGCAAGACCTTGCCACTCAGATCTGCAAACAGCAAAGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216214.7
ENST00000441876.7
ENST00000487732.5
CDS CAA 72 bp CAAGAAATACTCTTCCCCGAGGCTGAGAATTTCTCCTaGTGGGTATTGCGAGGACTGAGATTGTGCGTGGGT +
Preference number: 6 (lower is better)
Translates to: QEILFPEAENFS*WVLRGLRLCVG
Trigger: ACCCACGCACAATCTCAGTCCTCGCAATACCCACAAGGAGAAATTCTCAGCCTCGGGGAAGAGTATTTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481447.1
ENST00000491671.1
CDS CAA 90 bp ATCAGCATCTGGGCTTTGCTGTTTGCAGATCTGAGTGGCAAGGTCTaGCACATATCCTGGAAAGTGGTCAAAACAGTCCCCGTAGGATAC +
Preference number: 6 (lower is better)
Translates to: ISIWALLFADLSGKV*HISWKVVKTVPVGY
Trigger: GTATCCTACGGGGACTGTTTTGACCACTTTCCAGGATATGTGCAAGACCTTGCCACTCAGATCTGCAAACAGCAAAGCCCAGATGCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216214.7
ENST00000441876.7
ENST00000487732.5
CDS TCA 72 bp TCCAAAATGCTTCCTAAGCCACCATTCCTCATCTCATaGGACTCATCAGGCTGGTTGGACTCTCGCTGTTCT +
Preference number: 6 (lower is better)
Translates to: SKMLPKPPFLIS*DSSGWLDSRCS
Trigger: AGAACAGCGAGAGTCCAACCAGCCTGATGAGTCTCATGAGATGAGGAATGGTGGCTTAGGAAGCATTTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424557.1
ENST00000452238.5
CDS CCA 72 bp GATCAGCATCTGGGCTTTGCTGTTTGCAGATCTGAGTaGCAAGGTCTTGCACATATCCTGGAAAGTGGTCAA +
Preference number: 6 (lower is better)
Translates to: DQHLGFAVCRSE*QGLAHILESGQ
Trigger: TTGACCACTTTCCAGGATATGTGCAAGACCTTGCCACTCAGATCTGCAAACAGCAAAGCCCAGATGCTGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216214.7
ENST00000441876.7
ENST00000487732.5
CDS CCA 72 bp TGCTCAAAACCTCTTTCTCAGCCTGAACTGCAGGTCTaGTGCTGGCTCCTCAGACAGTATTTCAAACACAAC +
Preference number: 6 (lower is better)
Translates to: CSKPLSQPELQV*CWLLRQYFKHN
Trigger: GTTGTGTTTGAAATACTGTCTGAGGAGCCAGCACCAGACCTGCAGTTCAGGCTGAGAAAGAGGTTTTGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424557.1
CDS CCA 72 bp TTTGCAGATCTGAGTGGCAAGGTCTTGCACATATCCTaGAAAGTGGTCAAAACAGTCCCCGTAGGATACAAC +
Preference number: 6 (lower is better)
Translates to: FADLSGKVLHIS*KVVKTVPVGYN
Trigger: GTTGTATCCTACGGGGACTGTTTTGACCACTTTCCAGGATATGTGCAAGACCTTGCCACTCAGATCTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216214.7
ENST00000441876.7
ENST00000487732.5
CDS GCA 72 bp GTAGGATACAACTTTGATTCCGTGCAGAAGCATATCTaGCTGATGCTTAAAGAAATGGTCTTCATTCTCCTT +
Preference number: 6 (lower is better)
Translates to: VGYNFDSVQKHI*LMLKEMVFILL
Trigger: AAGGAGAATGAAGACCATTTCTTTAAGCATCAGGCAGATATGCTTCTGCACGGAATCAAAGTTGTATCCTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216214.7
ENST00000441876.7
ENST00000459849.1
ENST00000476754.1
ENST00000487732.5