RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM114A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000197712

Ensembl transcript IDs: ENST00000358869.5, ENST00000508737.1, ENST00000510213.5, ENST00000512889.1, ENST00000513966.1, ENST00000515037.5

Found 175 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAAGCTGTGCTCACTCACCCACCGCTCACCCCCTGCTGTGTGGCCTaGTTCCTAACCAGTGCCACGGACTGGTACTGGTCTGTGGCCTGG +
Preference number: 1 (lower is better)
Translates to: EAVLTHPPLTPCCVA*FLTSATDWYWSVAW
Trigger: CCAGGCCACAGACCAGTACCAGTCCGTGGCACTGGTTAGGAACCAGGCCACACAGCAGGGGGTGAGCGGTGGGTGAGTGAGCACAGCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358869.5
3UTR TCA 90 bp GCTCAGGCAGTAATGCAAGCTCTGGGGAGCAGCTGTAAATACAGATaGAGCTGTGCTCACTCACCCACCGCTCACCCCCTGCTGTGTGGC +
Preference number: 1 (lower is better)
Translates to: AQAVMQALGSSCKYR*SCAHSPTAHPLLCG
Trigger: GCCACACAGCAGGGGGTGAGCGGTGGGTGAGTGAGCACAGCTTCATCTGTATTTACAGCTGCTCCCCAGAGCTTGCATTACTGCCTGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358869.5
3UTR TCA 90 bp CTAGATCCCTCGCATGTGCAGTTCACAACAGGGTTCGCACTCCCATaGGACTCTAATGCTGCTGCTGACCTGACGGGAGGCAGAGCTCAG +
Preference number: 1 (lower is better)
Translates to: LDPSHVQFTTGFALP*DSNAAADLTGGRAQ
Trigger: CTGAGCTCTGCCTCCCGTCAGGTCAGCAGCAGCATTAGAGTCTCATGGGAGTGCGAACCCTGTTGTGAACTGCACATGCGAGGGATCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358869.5
3UTR CCA 90 bp GTGAAGCAGGTGTATTGTATCGAACATGCAGCTGCAATGAAGGCGTaGAGCTCAGGAGAAGCAGCCACTGACAATGCCCCTCCTGGCCGC +
Preference number: 1 (lower is better)
Translates to: VKQVYCIEHAAAMKA*SSGEAATDNAPPGR
Trigger: GCGGCCAGGAGGGGCATTGTCAGTGGCTGCTTCTCCTGAGCTCCACGCCTTCATTGCAGCTGCATGTTCGATACAATACACCTGCTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358869.5
3UTR TCA 90 bp CCTTTAGCAACGATGATGATATTTGCCACCAGCGAGTGTGATCTGTaGGGCGATTTTAAAATGCAGTCCTGGGATTCTACTGTATTGAAA +
Preference number: 1 (lower is better)
Translates to: PLATMMIFATSECDL*GDFKMQSWDSTVLK
Trigger: TTTCAATACAGTAGAATCCCAGGACTGCATTTTAAAATCGCCTCACAGATCACACTCGCTGGTGGCAAATATCATCATCGTTGCTAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358869.5
3UTR-3UTR TCA 90 bp TCAGGAGAAGCAGCCACTGACAATGCCCCTCCTGGCCGCAGGGTCTTCTGTGCAGGGTTCGCACTCCCATaGGACTCTAATGCTGCTGCT +
Preference number: 2 (lower is better)
Translates to: SGEAATDNAPPGRRVFCAGFALP*DSNAAA
Trigger: AGCAGCAGCATTAGAGTCTCATGGGAGTGCGAACCC...TGCACAGAAGACCCTGCGGCCAGGAGGGGCATTGTCAGTGGCTGCTTCTCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358869.5
3UTR-3UTR GCA 90 bp AAGCTCTGGGGAGCAGCTGTAAATACAGATGAAGCTGTGCTCACTCACCCACCGAGTGAGCCGAGATTGTaGCAACGCACTCCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: KLWGAAVNTDEAVLTHPPSEPRL*QRTPAW
Trigger: CCAGGCTGGAGTGCGTTGGCACAATCTCGGCTCACT...CGGTGGGTGAGTGAGCACAGCTTCATCTGTATTTACAGCTGCTCCCCAGAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358869.5
3UTR-3UTR CCA 90 bp AAGCTCTGGGGAGCAGCTGTAAATACAGATGAAGCTGTGCTCACTCACCCACCGTGTAGTGTCCTCAAATaGATGTCTGTGGCCAGGCGC +
Preference number: 2 (lower is better)
Translates to: KLWGAAVNTDEAVLTHPPCSVLK*MSVARR
Trigger: GCGCCTGGCCACAGACATCCATTTGAGGACACTACA...CGGTGGGTGAGTGAGCACAGCTTCATCTGTATTTACAGCTGCTCCCCAGAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358869.5
3UTR CAA 90 bp GTCTGTGGCCAGGCGCACAGAGAACATCCCCTTAAATGGTACATATaGAGGCAAGGCGGCCAGCTGTCTCCTTTAACTAGATGGAGTCTG +
Preference number: 2 (lower is better)
Translates to: VCGQAHREHPLKWYI*RQGGQLSPLTRWSL
Trigger: CAGACTCCATCTAGTTAAAGGAGACAGCTGGCCGCCTTGCCTCAATATGTACCATTTAAGGGGATGTTCTCTGTGCGCCTGGCCACAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358869.5
3UTR-3UTR TCA 90 bp TCAGGAGAAGCAGCCACTGACAATGCCCCTCCTGGCCGCAGGGTCTTCTGTGCATCTAAGGTCTCCCCATaGGTTTCTAAATATAGCATG +
Preference number: 2 (lower is better)
Translates to: SGEAATDNAPPGRRVFCASKVSP*VSKYSM
Trigger: CATGCTATATTTAGAAACTCATGGGGAGACCTTAGA...TGCACAGAAGACCCTGCGGCCAGGAGGGGCATTGTCAGTGGCTGCTTCTCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358869.5
3UTR-3UTR CCA 90 bp GGCTGTGAAGCAGGTGTATTGTATCGAACATGCAGCTGCAATGAAGGCGTGGAGTCAAATGGATGTCTGTaGCCAGGCGCACAGAGAACA +
Preference number: 2 (lower is better)
Translates to: GCEAGVLYRTCSCNEGVESNGCL*PGAQRT
Trigger: TGTTCTCTGTGCGCCTGGCCACAGACATCCATTTGA...CTCCACGCCTTCATTGCAGCTGCATGTTCGATACAATACACCTGCTTCACAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358869.5
3UTR-3UTR CCA 90 bp TCCACCTTGCAAAACTGTGAGCTTCATTTGCCCTGGAGAGAACTACTAGGCAAGGGTCCCCAACCTTTCTaGTACCAGGGACCGGTTTCA +
Preference number: 2 (lower is better)
Translates to: STLQNCELHLPWRELLGKGPQPF*YQGPVS
Trigger: TGAAACCGGTCCCTGGTACCAGAAAGGTTGGGGACC...CTTGCCTAGTAGTTCTCTCCAGGGCAAATGAAGCTCACAGTTTTGCAAGGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358869.5
3UTR-3UTR TCA 90 bp GGCTGTGAAGCAGGTGTATTGTATCGAACATGCAGCTGCAATGAAGGCGTGGAGAGCTGTAAATACAGATaGAGCTGTGCTCACTCACCC +
Preference number: 2 (lower is better)
Translates to: GCEAGVLYRTCSCNEGVESCKYR*SCAHSP
Trigger: GGGTGAGTGAGCACAGCTTCATCTGTATTTACAGCT...CTCCACGCCTTCATTGCAGCTGCATGTTCGATACAATACACCTGCTTCACAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358869.5
3UTR-3UTR TCA 90 bp CAGGTGTATTGTATCGAACATGCAGCTGCAATGAAGGCGTGGAGCTCAGGAGAAAGCGAGTGTGATCTGTaGGGCGATTTTAAAATGCAG +
Preference number: 2 (lower is better)
Translates to: QVYCIEHAAAMKAWSSGESECDL*GDFKMQ
Trigger: CTGCATTTTAAAATCGCCTCACAGATCACACTCGCT...TTCTCCTGAGCTCCACGCCTTCATTGCAGCTGCATGTTCGATACAATACACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358869.5
3UTR-3UTR GCA 90 bp GGCTGTGAAGCAGGTGTATTGTATCGAACATGCAGCTGCAATGAAGGCGTGGAGGAGGCGATTTTAAAATaGAGTCCTGGGATTCTACTG +
Preference number: 2 (lower is better)
Translates to: GCEAGVLYRTCSCNEGVEEAILK*SPGILL
Trigger: CAGTAGAATCCCAGGACTGCATTTTAAAATCGCCTC...CTCCACGCCTTCATTGCAGCTGCATGTTCGATACAATACACCTGCTTCACAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358869.5
3UTR-3UTR TCA 90 bp TTCTTTTTCAGAATATCTACCTCTACTGGGATAAGATCACGTTTCTTTACTGTGTGTTGCAAGAATGAATaGCCGGCCGGGCGCGGTGGC +
Preference number: 2 (lower is better)
Translates to: FFFRISTSTGIRSRFFTVCCKNE*PAGRGG
Trigger: GCCACCGCGCCCGGCCGGTCATTCATTCTTGCAACA...CACAGTAAAGAAACGTGATCTTATCCCAGTAGAGGTAGATATTCTGAAAAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358869.5
3UTR-3UTR CCA 90 bp CAGGTGTATTGTATCGAACATGCAGCTGCAATGAAGGCGTGGAGCTCAGGAGAAGAACATCCCCTTAAATaGTACATATTGAGGCAAGGC +
Preference number: 2 (lower is better)
Translates to: QVYCIEHAAAMKAWSSGEEHPLK*YILRQG
Trigger: GCCTTGCCTCAATATGTACCATTTAAGGGGATGTTC...TTCTCCTGAGCTCCACGCCTTCATTGCAGCTGCATGTTCGATACAATACACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358869.5
3UTR-3UTR CCA 90 bp GGCTGTGAAGCAGGTGTATTGTATCGAACATGCAGCTGCAATGAAGGCGTGGAGAATATCTACCTCTACTaGGATAAGATCACGTTTCTT +
Preference number: 2 (lower is better)
Translates to: GCEAGVLYRTCSCNEGVENIYLY*DKITFL
Trigger: AAGAAACGTGATCTTATCCCAGTAGAGGTAGATATT...CTCCACGCCTTCATTGCAGCTGCATGTTCGATACAATACACCTGCTTCACAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358869.5
3UTR-3UTR CAA 90 bp CACTCACCCACCGCTCACCCCCTGCTGTGTGGCCTGGTTCCTAACCAGTGCCACCTTAAATGGTACATATaGAGGCAAGGCGGCCAGCTG +
Preference number: 3 (lower is better)
Translates to: HSPTAHPLLCGLVPNQCHLKWYI*RQGGQL
Trigger: CAGCTGGCCGCCTTGCCTCAATATGTACCATTTAAG...GTGGCACTGGTTAGGAACCAGGCCACACAGCAGGGGGTGAGCGGTGGGTGAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358869.5
3UTR TCA 72 bp TCGCATGTGCAGTTCACAACAGGGTTCGCACTCCCATaGGACTCTAATGCTGCTGCTGACCTGACGGGAGGC +
Preference number: 3 (lower is better)
Translates to: SHVQFTTGFALP*DSNAAADLTGG
Trigger: GCCTCCCGTCAGGTCAGCAGCAGCATTAGAGTCTCATGGGAGTGCGAACCCTGTTGTGAACTGCACATGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358869.5
3UTR TCA 72 bp GTAATGCAAGCTCTGGGGAGCAGCTGTAAATACAGATaGAGCTGTGCTCACTCACCCACCGCTCACCCCCTG +
Preference number: 3 (lower is better)
Translates to: VMQALGSSCKYR*SCAHSPTAHPL
Trigger: CAGGGGGTGAGCGGTGGGTGAGTGAGCACAGCTTCATCTGTATTTACAGCTGCTCCCCAGAGCTTGCATTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358869.5
3UTR GCA 72 bp GGCTGTGAAGCAGGTGTATTGTATCGAACATGCAGCTaGAATGAAGGCGTGGAGCTCAGGAGAAGCAGCCAC +
Preference number: 3 (lower is better)
Translates to: GCEAGVLYRTCS*NEGVELRRSSH
Trigger: GTGGCTGCTTCTCCTGAGCTCCACGCCTTCATTGCAGCTGCATGTTCGATACAATACACCTGCTTCACAGCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358869.5
3UTR-3UTR CAA 90 bp TCCACCTTGCAAAACTGTGAGCTTCATTTGCCCTGGAGAGAACTACTAGGCAAGTGCAGTGAGCCGAGATaGTGCCAACGCACTCCAGCC +
Preference number: 3 (lower is better)
Translates to: STLQNCELHLPWRELLGKCSEPR*CQRTPA
Trigger: GGCTGGAGTGCGTTGGCACAATCTCGGCTCACTGCA...CTTGCCTAGTAGTTCTCTCCAGGGCAAATGAAGCTCACAGTTTTGCAAGGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358869.5
3UTR CCA 72 bp GTGTATTGTATCGAACATGCAGCTGCAATGAAGGCGTaGAGCTCAGGAGAAGCAGCCACTGACAATGCCCCT +
Preference number: 3 (lower is better)
Translates to: VYCIEHAAAMKA*SSGEAATDNAP
Trigger: AGGGGCATTGTCAGTGGCTGCTTCTCCTGAGCTCCACGCCTTCATTGCAGCTGCATGTTCGATACAATACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358869.5
3UTR TCA 72 bp CACATGACAGTACCTGTAGGGATGTCCATGGGGCTGTaGAGCAGGTGTATTGTATCGAACATGCAGCTGCAA +
Preference number: 3 (lower is better)
Translates to: HMTVPVGMSMGL*SRCIVSNMQLQ
Trigger: TTGCAGCTGCATGTTCGATACAATACACCTGCTTCACAGCCCCATGGACATCCCTACAGGTACTGTCATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358869.5
3UTR TCA 72 bp ACGATGATGATATTTGCCACCAGCGAGTGTGATCTGTaGGGCGATTTTAAAATGCAGTCCTGGGATTCTACT +
Preference number: 3 (lower is better)
Translates to: TMMIFATSECDL*GDFKMQSWDST
Trigger: AGTAGAATCCCAGGACTGCATTTTAAAATCGCCTCACAGATCACACTCGCTGGTGGCAAATATCATCATCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR CCA 90 bp CACCCCCTGCTGTGTGGCCTGGTTCCTAACCAGTGCCACGGACTGGTACTGGTCGCCACGGACTGGTACTaGTCTGTGGCCTGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: HPLLCGLVPNQCHGLVLVATDWY*SVAWGW
Trigger: CCACCCCCAGGCCACAGACCAGTACCAGTCCGTGGC...GACCAGTACCAGTCCGTGGCACTGGTTAGGAACCAGGCCACACAGCAGGGGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR CCA 90 bp TCAGGAGAAGCAGCCACTGACAATGCCCCTCCTGGCCGCAGGGTCTTCTGTGCAGGGGCTCCAGGGCGTTaGCATCCTGAGGCTGCACAG +
Preference number: 4 (lower is better)
Translates to: SGEAATDNAPPGRRVFCAGAPGR*HPEAAQ
Trigger: CTGTGCAGCCTCAGGATGCCAACGCCCTGGAGCCCC...TGCACAGAAGACCCTGCGGCCAGGAGGGGCATTGTCAGTGGCTGCTTCTCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR CCA 90 bp CACCCCCTGCTGTGTGGCCTGGTTCCTAACCAGTGCCACGGACTGGTACTGGTCGTAGCGGGATGGGGGTaGGGGATGGTTTCGGCACGA +
Preference number: 4 (lower is better)
Translates to: HPLLCGLVPNQCHGLVLVVAGWG*GMVSAR
Trigger: TCGTGCCGAAACCATCCCCCACCCCCATCCCGCTAC...GACCAGTACCAGTCCGTGGCACTGGTTAGGAACCAGGCCACACAGCAGGGGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR CCA 90 bp TCAGGAGAAGCAGCCACTGACAATGCCCCTCCTGGCCGCAGGGTCTTCTGTGCACATGCCCCTCCCCTCTaGGGTCAGCTGGTGTTGGCT +
Preference number: 4 (lower is better)
Translates to: SGEAATDNAPPGRRVFCAHAPPL*GQLVLA
Trigger: AGCCAACACCAGCTGACCCCAGAGGGGAGGGGCATG...TGCACAGAAGACCCTGCGGCCAGGAGGGGCATTGTCAGTGGCTGCTTCTCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR CCA 90 bp CACTCACCCACCGCTCACCCCCTGCTGTGTGGCCTGGTTCCTAACCAGTGCCACCTGATGAAGGGGAAGTaGGTGGGCTTTCTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: HSPTAHPLLCGLVPNQCHLMKGK*VGFLQG
Trigger: GCCCTGCAGAAAGCCCACCCACTTCCCCTTCATCAG...GTGGCACTGGTTAGGAACCAGGCCACACAGCAGGGGGTGAGCGGTGGGTGAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR CCA 90 bp CACCCCCTGCTGTGTGGCCTGGTTCCTAACCAGTGCCACGGACTGGTACTGGTCACCAGTGCCACGGACTaGTACTGGTCTGTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: HPLLCGLVPNQCHGLVLVTSATD*YWSVAW
Trigger: CCAGGCCACAGACCAGTACCAGTCCGTGGCACTGGT...GACCAGTACCAGTCCGTGGCACTGGTTAGGAACCAGGCCACACAGCAGGGGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR GCA 90 bp CACCCCCTGCTGTGTGGCCTGGTTCCTAACCAGTGCCACGGACTGGTACTGGTCTGCACCCTGCACAGCTaGATTTTCATGCCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: HPLLCGLVPNQCHGLVLVCTLHS*IFMPLP
Trigger: GGGGAGGGGCATGAAAATGCAGCTGTGCAGGGTGCA...GACCAGTACCAGTCCGTGGCACTGGTTAGGAACCAGGCCACACAGCAGGGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR CCA 90 bp GGCTGTGAAGCAGGTGTATTGTATCGAACATGCAGCTGCAATGAAGGCGTGGAGAGAGCAGGCAGGGCGTaGGTCGGCGCTCAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: GCEAGVLYRTCSCNEGVERAGRA*VGAQAA
Trigger: GGCCGCCTGAGCGCCGACCCACGCCCTGCCTGCTCT...CTCCACGCCTTCATTGCAGCTGCATGTTCGATACAATACACCTGCTTCACAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR GCA 90 bp TCAGGAGAAGCAGCCACTGACAATGCCCCTCCTGGCCGCAGGGTCTTCTGTGCAAGTGAGCCGAGATTGTaGCAACGCACTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: SGEAATDNAPPGRRVFCASEPRL*QRTPAW
Trigger: CCAGGCTGGAGTGCGTTGGCACAATCTCGGCTCACT...TGCACAGAAGACCCTGCGGCCAGGAGGGGCATTGTCAGTGGCTGCTTCTCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR TCA 90 bp GGCTGTGAAGCAGGTGTATTGTATCGAACATGCAGCTGCAATGAAGGCGTGGAGAGGGCGTTGGCATCCTaGGGCTGCACAGGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: GCEAGVLYRTCSCNEGVERALAS*GCTGGP
Trigger: TGGGCCCCCTGTGCAGCCTCAGGATGCCAACGCCCT...CTCCACGCCTTCATTGCAGCTGCATGTTCGATACAATACACCTGCTTCACAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR GCA 90 bp CACCCCCTGCTGTGTGGCCTGGTTCCTAACCAGTGCCACGGACTGGTACTGGTCGCCAGGTCACGGCTGTaGTTTCAAACAACTGGTCTG +
Preference number: 4 (lower is better)
Translates to: HPLLCGLVPNQCHGLVLVARSRL*FQTTGL
Trigger: CAGACCAGTTGTTTGAAAGCACAGCCGTGACCTGGC...GACCAGTACCAGTCCGTGGCACTGGTTAGGAACCAGGCCACACAGCAGGGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR CCA 90 bp CACCCCCTGCTGTGTGGCCTGGTTCCTAACCAGTGCCACGGACTGGTACTGGTCCATTTTAGTATCGGATaGCAGAGGCGAGGGCTAGCC +
Preference number: 4 (lower is better)
Translates to: HPLLCGLVPNQCHGLVLVHFSIG*QRRGLA
Trigger: GGCTAGCCCTCGCCTCTGCCATCCGATACTAAAATG...GACCAGTACCAGTCCGTGGCACTGGTTAGGAACCAGGCCACACAGCAGGGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR TCA 90 bp CTTGTAGTGTCCTCAAATGGATGTCTGTGGCCAGGCGCACAGAGAACATCCCCTCAGTCACGTCTCCATTaGGAGGGGGCTCCAGGGCGT +
Preference number: 4 (lower is better)
Translates to: LVVSSNGCLWPGAQRTSPQSRLH*EGAPGR
Trigger: ACGCCCTGGAGCCCCCTCTCAATGGAGACGTGACTG...AGGGGATGTTCTCTGTGCGCCTGGCCACAGACATCCATTTGAGGACACTACAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR GCA 90 bp CACCCCCTGCTGTGTGGCCTGGTTCCTAACCAGTGCCACGGACTGGTACTGGTCGCCCTGATCTGTGGCTaGATCTGTTATTTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: HPLLCGLVPNQCHGLVLVALICG*ICYFRD
Trigger: GTCCCTGAAATAACAGATGCAGCCACAGATCAGGGC...GACCAGTACCAGTCCGTGGCACTGGTTAGGAACCAGGCCACACAGCAGGGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR CCA 90 bp TCAGGAGAAGCAGCCACTGACAATGCCCCTCCTGGCCGCAGGGTCTTCTGTGCATGTAGTGTCCTCAAATaGATGTCTGTGGCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: SGEAATDNAPPGRRVFCACSVLK*MSVARR
Trigger: GCGCCTGGCCACAGACATCCATTTGAGGACACTACA...TGCACAGAAGACCCTGCGGCCAGGAGGGGCATTGTCAGTGGCTGCTTCTCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR TCA 90 bp CACCCCCTGCTGTGTGGCCTGGTTCCTAACCAGTGCCACGGACTGGTACTGGTCGTTCTGCCTCAAGGCTaGCGGAATCAATACATTCAG +
Preference number: 4 (lower is better)
Translates to: HPLLCGLVPNQCHGLVLVVLPQG*RNQYIQ
Trigger: CTGAATGTATTGATTCCGTCAGCCTTGAGGCAGAAC...GACCAGTACCAGTCCGTGGCACTGGTTAGGAACCAGGCCACACAGCAGGGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR TCA 90 bp CACCCCCTGCTGTGTGGCCTGGTTCCTAACCAGTGCCACGGACTGGTACTGGTCCCAGAATTTACACCATaGATCCGTAGAGTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: HPLLCGLVPNQCHGLVLVPEFTP*IRRVAP
Trigger: AGGAGCCACTCTACGGATTCATGGTGTAAATTCTGG...GACCAGTACCAGTCCGTGGCACTGGTTAGGAACCAGGCCACACAGCAGGGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR TCA 90 bp TCAGGAGAAGCAGCCACTGACAATGCCCCTCCTGGCCGCAGGGTCTTCTGTGCACAGGGCTTCCAGGTGTaGCAAGCCTTGATATTCATC +
Preference number: 4 (lower is better)
Translates to: SGEAATDNAPPGRRVFCAQGFQV*QALIFI
Trigger: GATGAATATCAAGGCTTGTCACACCTGGAAGCCCTG...TGCACAGAAGACCCTGCGGCCAGGAGGGGCATTGTCAGTGGCTGCTTCTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR GCA 90 bp TCCACCTTGCAAAACTGTGAGCTTCATTTGCCCTGGAGAGAACTACTAGGCAAGGGGGGCCTGGGGATCTaGGGTAGGGAGTGGGACCCA +
Preference number: 4 (lower is better)
Translates to: STLQNCELHLPWRELLGKGGLGI*GREWDP
Trigger: TGGGTCCCACTCCCTACCGCAGATCCCCAGGCCCCC...CTTGCCTAGTAGTTCTCTCCAGGGCAAATGAAGCTCACAGTTTTGCAAGGTGGA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR GCA 90 bp TCAGGAGAAGCAGCCACTGACAATGCCCCTCCTGGCCGCAGGGTCTTCTGTGCATGCTGTGCCAGTCTCTaGTTCTCCTTCTCCTTAGCT +
Preference number: 4 (lower is better)
Translates to: SGEAATDNAPPGRRVFCACCASL*FSFSLA
Trigger: AGCTAAGGAGAAGGAGAAGCAGAGACTGGCACAGCA...TGCACAGAAGACCCTGCGGCCAGGAGGGGCATTGTCAGTGGCTGCTTCTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR CCA 90 bp CAGGTGTATTGTATCGAACATGCAGCTGCAATGAAGGCGTGGAGCTCAGGAGAAATCTGCGGTAGGGAGTaGGACCCATCCCGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: QVYCIEHAAAMKAWSSGEICGRE*DPSRGL
Trigger: CAGCCCCCGGGATGGGTCCCACTCCCTACCGCAGAT...TTCTCCTGAGCTCCACGCCTTCATTGCAGCTGCATGTTCGATACAATACACCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR CCA 90 bp CACTCACCCACCGCTCACCCCCTGCTGTGTGGCCTGGTTCCTAACCAGTGCCACCCGCCAGACTTTCAATaGACGACATGTATACTTCCT +
Preference number: 4 (lower is better)
Translates to: HSPTAHPLLCGLVPNQCHPPDFQ*TTCILP
Trigger: AGGAAGTATACATGTCGTCCATTGAAAGTCTGGCGG...GTGGCACTGGTTAGGAACCAGGCCACACAGCAGGGGGTGAGCGGTGGGTGAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR CCA 90 bp TCAGGAGAAGCAGCCACTGACAATGCCCCTCCTGGCCGCAGGGTCTTCTGTGCATCAAATGGATGTCTGTaGCCAGGCGCACAGAGAACA +
Preference number: 4 (lower is better)
Translates to: SGEAATDNAPPGRRVFCASNGCL*PGAQRT
Trigger: TGTTCTCTGTGCGCCTGGCCACAGACATCCATTTGA...TGCACAGAAGACCCTGCGGCCAGGAGGGGCATTGTCAGTGGCTGCTTCTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR GCA 90 bp CACCCCCTGCTGTGTGGCCTGGTTCCTAACCAGTGCCACGGACTGGTACTGGTCTGCTTTTTCCTTGACTaGCGTCAATCCATGACCTAC +
Preference number: 4 (lower is better)
Translates to: HPLLCGLVPNQCHGLVLVCFFLD*RQSMTY
Trigger: GTAGGTCATGGATTGACGGCAGTCAAGGAAAAAGCA...GACCAGTACCAGTCCGTGGCACTGGTTAGGAACCAGGCCACACAGCAGGGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR CCA 90 bp CACTCACCCACCGCTCACCCCCTGCTGTGTGGCCTGGTTCCTAACCAGTGCCACTCCGTTTTCAGTATTTaGTTGGGCTCCTTCAGAAGA +
Preference number: 4 (lower is better)
Translates to: HSPTAHPLLCGLVPNQCHSVFSI*LGSFRR
Trigger: TCTTCTGAAGGAGCCCAACCAAATACTGAAAACGGA...GTGGCACTGGTTAGGAACCAGGCCACACAGCAGGGGGTGAGCGGTGGGTGAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR TCA 90 bp GGCTGTGAAGCAGGTGTATTGTATCGAACATGCAGCTGCAATGAAGGCGTGGAGCGGTTCTCTCCATCGTaGGCTGCTGTGCCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: GCEAGVLYRTCSCNEGVERFSPS*AAVPVS
Trigger: AGAGACTGGCACAGCAGCTCACGATGGAGAGAACCG...CTCCACGCCTTCATTGCAGCTGCATGTTCGATACAATACACCTGCTTCACAGCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR GCA 90 bp CAGGTGTATTGTATCGAACATGCAGCTGCAATGAAGGCGTGGAGCTCAGGAGAAAGTGGGTGGGCTTTCTaGAGGGCCCTGATCTGTGGC +
Preference number: 4 (lower is better)
Translates to: QVYCIEHAAAMKAWSSGESGWAF*RALICG
Trigger: GCCACAGATCAGGGCCCTGCAGAAAGCCCACCCACT...TTCTCCTGAGCTCCACGCCTTCATTGCAGCTGCATGTTCGATACAATACACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR GCA 90 bp CACCCCCTGCTGTGTGGCCTGGTTCCTAACCAGTGCCACGGACTGGTACTGGTCGAGGCGATTTTAAAATaGAGTCCTGGGATTCTACTG +
Preference number: 4 (lower is better)
Translates to: HPLLCGLVPNQCHGLVLVEAILK*SPGILL
Trigger: CAGTAGAATCCCAGGACTGCATTTTAAAATCGCCTC...GACCAGTACCAGTCCGTGGCACTGGTTAGGAACCAGGCCACACAGCAGGGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR CCA 90 bp CACCCCCTGCTGTGTGGCCTGGTTCCTAACCAGTGCCACGGACTGGTACTGGTCTGCTTTCGCTTTCATTaGACAGAATTTCCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: HPLLCGLVPNQCHGLVLVCFRFH*TEFPGL
Trigger: AAGCCCTGGAAATTCTGTCCAATGAAAGCGAAAGCA...GACCAGTACCAGTCCGTGGCACTGGTTAGGAACCAGGCCACACAGCAGGGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR CCA 90 bp GGCTGTGAAGCAGGTGTATTGTATCGAACATGCAGCTGCAATGAAGGCGTGGAGGCTGCAATGAAGGCGTaGAGCTCAGGAGAAGCAGCC +
Preference number: 4 (lower is better)
Translates to: GCEAGVLYRTCSCNEGVEAAMKA*SSGEAA
Trigger: GGCTGCTTCTCCTGAGCTCCACGCCTTCATTGCAGC...CTCCACGCCTTCATTGCAGCTGCATGTTCGATACAATACACCTGCTTCACAGCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR TCA 90 bp AAGCTCTGGGGAGCAGCTGTAAATACAGATGAAGCTGTGCTCACTCACCCACCGTACTGTGGCAGATGCTaGCGACAGCAGAGATTTGCC +
Preference number: 4 (lower is better)
Translates to: KLWGAAVNTDEAVLTHPPYCGRC*RQQRFA
Trigger: GGCAAATCTCTGCTGTCGTCAGCATCTGCCACAGTA...CGGTGGGTGAGTGAGCACAGCTTCATCTGTATTTACAGCTGCTCCCCAGAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR TCA 90 bp AAGCTCTGGGGAGCAGCTGTAAATACAGATGAAGCTGTGCTCACTCACCCACCGTCTTCCACCCAGTCATaGGCCCTCTTCATGGCCTTA +
Preference number: 4 (lower is better)
Translates to: KLWGAAVNTDEAVLTHPPSSTQS*ALFMAL
Trigger: TAAGGCCATGAAGAGGGCTCATGACTGGGTGGAAGA...CGGTGGGTGAGTGAGCACAGCTTCATCTGTATTTACAGCTGCTCCCCAGAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR TCA 90 bp CTTGTAGTGTCCTCAAATGGATGTCTGTGGCCAGGCGCACAGAGAACATCCCCTACTGGTCTGGATATGTaGGACCTGCAGAACAGGCAG +
Preference number: 4 (lower is better)
Translates to: LVVSSNGCLWPGAQRTSPTGLDM*DLQNRQ
Trigger: CTGCCTGTTCTGCAGGTCTCACATATCCAGACCAGT...AGGGGATGTTCTCTGTGCGCCTGGCCACAGACATCCATTTGAGGACACTACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR GCA 90 bp CTTGTAGTGTCCTCAAATGGATGTCTGTGGCCAGGCGCACAGAGAACATCCCCTTTCGGATCTGGGTTCTaGCTCAAGGCTGACGGAATC +
Preference number: 4 (lower is better)
Translates to: LVVSSNGCLWPGAQRTSPFGSGF*LKADGI
Trigger: GATTCCGTCAGCCTTGAGGCAGAACCCAGATCCGAA...AGGGGATGTTCTCTGTGCGCCTGGCCACAGACATCCATTTGAGGACACTACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR GCA 90 bp GGCTGTGAAGCAGGTGTATTGTATCGAACATGCAGCTGCAATGAAGGCGTGGAGCTCTCCATCGTGAGCTaGTGTGCCAGTCTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: GCEAGVLYRTCSCNEGVELSIVS*CASLCF
Trigger: GAAGCAGAGACTGGCACAGCAGCTCACGATGGAGAG...CTCCACGCCTTCATTGCAGCTGCATGTTCGATACAATACACCTGCTTCACAGCC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR GCA 90 bp CACTCACCCACCGCTCACCCCCTGCTGTGTGGCCTGGTTCCTAACCAGTGCCACAAAATGACTGAACCTTaGTTTCGCTTTCATTGGACA +
Preference number: 4 (lower is better)
Translates to: HSPTAHPLLCGLVPNQCHKMTEP*FRFHWT
Trigger: TGTCCAATGAAAGCGAAAGCAAGGTTCAGTCATTTT...GTGGCACTGGTTAGGAACCAGGCCACACAGCAGGGGGTGAGCGGTGGGTGAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR CCA 90 bp GGCTGTGAAGCAGGTGTATTGTATCGAACATGCAGCTGCAATGAAGGCGTGGAGGATGGGGGTGGGGGATaGTTTCGGCACGAAGCTATT +
Preference number: 4 (lower is better)
Translates to: GCEAGVLYRTCSCNEGVEDGGGG*FRHEAI
Trigger: AATAGCTTCGTGCCGAAACCATCCCCCACCCCCATC...CTCCACGCCTTCATTGCAGCTGCATGTTCGATACAATACACCTGCTTCACAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR TCA 90 bp CAGGTGTATTGTATCGAACATGCAGCTGCAATGAAGGCGTGGAGCTCAGGAGAAAACATGCAGCTGCAATaGAGGCGTGGAGCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: QVYCIEHAAAMKAWSSGENMQLQ*RRGAQE
Trigger: CTCCTGAGCTCCACGCCTTCATTGCAGCTGCATGTT...TTCTCCTGAGCTCCACGCCTTCATTGCAGCTGCATGTTCGATACAATACACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR TCA 90 bp CACCCCCTGCTGTGTGGCCTGGTTCCTAACCAGTGCCACGGACTGGTACTGGTCGAATCAAAGCAAATGTaGATAAGAGGTTTCCACCTT +
Preference number: 4 (lower is better)
Translates to: HPLLCGLVPNQCHGLVLVESKQM*IRGFHL
Trigger: AAGGTGGAAACCTCTTATTCACATTTGCTTTGATTC...GACCAGTACCAGTCCGTGGCACTGGTTAGGAACCAGGCCACACAGCAGGGGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR GCA 90 bp GAACATCCCCTTAAATGGTACATATTGAGGCAAGGCGGCCAGCTGTCTCCTTTAAGTGGAGGCGGTGCCTaGTTAGAGTGTTGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: EHPLKWYILRQGGQLSPLSGGGA*LECWLD
Trigger: GTCCAGCCAACACTCTAAGCAGGCACCGCCTCCACT...TAAAGGAGACAGCTGGCCGCCTTGCCTCAATATGTACCATTTAAGGGGATGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR GCA 90 bp TCCACCTTGCAAAACTGTGAGCTTCATTTGCCCTGGAGAGAACTACTAGGCAAGTGCGAGTGGAGGCGGTaGCTGCTTAGAGTGTTGGCT +
Preference number: 4 (lower is better)
Translates to: STLQNCELHLPWRELLGKCEWRR*LLRVLA
Trigger: AGCCAACACTCTAAGCAGGCACCGCCTCCACTCGCA...CTTGCCTAGTAGTTCTCTCCAGGGCAAATGAAGCTCACAGTTTTGCAAGGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR CCA 90 bp AAGCTCTGGGGAGCAGCTGTAAATACAGATGAAGCTGTGCTCACTCACCCACCGCAGGGCCCTGATCTGTaGCTGCATCTGTTATTTCAG +
Preference number: 4 (lower is better)
Translates to: KLWGAAVNTDEAVLTHPPQGPDL*LHLLFQ
Trigger: CTGAAATAACAGATGCAGCCACAGATCAGGGCCCTG...CGGTGGGTGAGTGAGCACAGCTTCATCTGTATTTACAGCTGCTCCCCAGAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR TCA 90 bp GGCTGTGAAGCAGGTGTATTGTATCGAACATGCAGCTGCAATGAAGGCGTGGAGTCTTCATGGCCTTATTaGGTTTGTCAGGTGTGGCCG +
Preference number: 4 (lower is better)
Translates to: GCEAGVLYRTCSCNEGVESSWPY*VCQVWP
Trigger: CGGCCACACCTGACAAACTCAATAAGGCCATGAAGA...CTCCACGCCTTCATTGCAGCTGCATGTTCGATACAATACACCTGCTTCACAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR TCA 90 bp GAACATCCCCTTAAATGGTACATATTGAGGCAAGGCGGCCAGCTGTCTCCTTTAGGGTTCGCACTCCCATaGGACTCTAATGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: EHPLKWYILRQGGQLSPLGFALP*DSNAAA
Trigger: AGCAGCAGCATTAGAGTCTCATGGGAGTGCGAACCC...TAAAGGAGACAGCTGGCCGCCTTGCCTCAATATGTACCATTTAAGGGGATGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR TCA 90 bp GGCTGTGAAGCAGGTGTATTGTATCGAACATGCAGCTGCAATGAAGGCGTGGAGATGTCCATGGGGCTGTaGAGCAGGTGTATTGTATCG +
Preference number: 4 (lower is better)
Translates to: GCEAGVLYRTCSCNEGVEMSMGL*SRCIVS
Trigger: CGATACAATACACCTGCTTCACAGCCCCATGGACAT...CTCCACGCCTTCATTGCAGCTGCATGTTCGATACAATACACCTGCTTCACAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR CCA 90 bp TCCACCTTGCAAAACTGTGAGCTTCATTTGCCCTGGAGAGAACTACTAGGCAAGGCCTGCTTAGAGTGTTaGCTGGACTGGAAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: STLQNCELHLPWRELLGKACLEC*LDWKSR
Trigger: CCTGCTCTTCCAGTCCAGCCAACACTCTAAGCAGGC...CTTGCCTAGTAGTTCTCTCCAGGGCAAATGAAGCTCACAGTTTTGCAAGGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR CCA 90 bp GGCTGTGAAGCAGGTGTATTGTATCGAACATGCAGCTGCAATGAAGGCGTGGAGCTGCTTTGTCTCCAGTaGCTAAGGTGTCACCAGCAT +
Preference number: 4 (lower is better)
Translates to: GCEAGVLYRTCSCNEGVELLCLQ*LRCHQH
Trigger: ATGCTGGTGACACCTTAGCCACTGGAGACAAAGCAG...CTCCACGCCTTCATTGCAGCTGCATGTTCGATACAATACACCTGCTTCACAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR CCA 90 bp AAGCTCTGGGGAGCAGCTGTAAATACAGATGAAGCTGTGCTCACTCACCCACCGTGCTTGGTCCTGAGCTaGTTTTTCCTCTTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: KLWGAAVNTDEAVLTHPPCLVLS*FFLFLS
Trigger: GGACAAGAAGAGGAAAAACCAGCTCAGGACCAAGCA...CGGTGGGTGAGTGAGCACAGCTTCATCTGTATTTACAGCTGCTCCCCAGAGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR CCA 90 bp CACCCCCTGCTGTGTGGCCTGGTTCCTAACCAGTGCCACGGACTGGTACTGGTCAATATCTACCTCTACTaGGATAAGATCACGTTTCTT +
Preference number: 4 (lower is better)
Translates to: HPLLCGLVPNQCHGLVLVNIYLY*DKITFL
Trigger: AAGAAACGTGATCTTATCCCAGTAGAGGTAGATATT...GACCAGTACCAGTCCGTGGCACTGGTTAGGAACCAGGCCACACAGCAGGGGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR CCA 90 bp GAACATCCCCTTAAATGGTACATATTGAGGCAAGGCGGCCAGCTGTCTCCTTTAGGTCCCCAACCTTTCTaGTACCAGGGACCGGTTTCA +
Preference number: 4 (lower is better)
Translates to: EHPLKWYILRQGGQLSPLGPQPF*YQGPVS
Trigger: TGAAACCGGTCCCTGGTACCAGAAAGGTTGGGGACC...TAAAGGAGACAGCTGGCCGCCTTGCCTCAATATGTACCATTTAAGGGGATGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR TCA 90 bp CTTGTAGTGTCCTCAAATGGATGTCTGTGGCCAGGCGCACAGAGAACATCCCCTGCTTCCCTTAACATCTaGGACAAGGAAACAGTTCTC +
Preference number: 4 (lower is better)
Translates to: LVVSSNGCLWPGAQRTSPASLNI*DKETVL
Trigger: GAGAACTGTTTCCTTGTCTCAGATGTTAAGGGAAGC...AGGGGATGTTCTCTGTGCGCCTGGCCACAGACATCCATTTGAGGACACTACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR TCA 90 bp GAACATCCCCTTAAATGGTACATATTGAGGCAAGGCGGCCAGCTGTCTCCTTTAACTGACACCACGGTTTaGTCCTCTTCCACCCAGTCA +
Preference number: 4 (lower is better)
Translates to: EHPLKWYILRQGGQLSPLTDTTV*SSSTQS
Trigger: TGACTGGGTGGAAGAGGATCAAACCGTGGTGTCAGT...TAAAGGAGACAGCTGGCCGCCTTGCCTCAATATGTACCATTTAAGGGGATGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR GCA 90 bp CAGGTGTATTGTATCGAACATGCAGCTGCAATGAAGGCGTGGAGCTCAGGAGAAATACAGATGAAGCTGTaGTCACTCACCCACCGCTCA +
Preference number: 4 (lower is better)
Translates to: QVYCIEHAAAMKAWSSGEIQMKL*SLTHRS
Trigger: TGAGCGGTGGGTGAGTGAGCACAGCTTCATCTGTAT...TTCTCCTGAGCTCCACGCCTTCATTGCAGCTGCATGTTCGATACAATACACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR CCA 90 bp GAACATCCCCTTAAATGGTACATATTGAGGCAAGGCGGCCAGCTGTCTCCTTTAACAGGCAGCAGCAGCTaGAAGGCATCCTGTATGTAC +
Preference number: 4 (lower is better)
Translates to: EHPLKWYILRQGGQLSPLTGSSS*KASCMY
Trigger: GTACATACAGGATGCCTTCCAGCTGCTGCTGCCTGT...TAAAGGAGACAGCTGGCCGCCTTGCCTCAATATGTACCATTTAAGGGGATGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358869.5
3UTR CAA 72 bp CAGGCGCACAGAGAACATCCCCTTAAATGGTACATATaGAGGCAAGGCGGCCAGCTGTCTCCTTTAACTAGA +
Preference number: 4 (lower is better)
Translates to: QAHREHPLKWYI*RQGGQLSPLTR
Trigger: TCTAGTTAAAGGAGACAGCTGGCCGCCTTGCCTCAATATGTACCATTTAAGGGGATGTTCTCTGTGCGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR TCA 90 bp GGCTGTGAAGCAGGTGTATTGTATCGAACATGCAGCTGCAATGAAGGCGTGGAGACTTTTGCTTGGTCCTaGGCTGGTTTTTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: GCEAGVLYRTCSCNEGVETFAWS*AGFSSS
Trigger: AGAAGAGGAAAAACCAGCTCAGGACCAAGCAAAAGT...CTCCACGCCTTCATTGCAGCTGCATGTTCGATACAATACACCTGCTTCACAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR TCA 90 bp GGCTGTGAAGCAGGTGTATTGTATCGAACATGCAGCTGCAATGAAGGCGTGGAGAGCGAGTGTGATCTGTaGGGCGATTTTAAAATGCAG +
Preference number: 4 (lower is better)
Translates to: GCEAGVLYRTCSCNEGVESECDL*GDFKMQ
Trigger: CTGCATTTTAAAATCGCCTCACAGATCACACTCGCT...CTCCACGCCTTCATTGCAGCTGCATGTTCGATACAATACACCTGCTTCACAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR GCA 90 bp TCCACCTTGCAAAACTGTGAGCTTCATTTGCCCTGGAGAGAACTACTAGGCAAGTATCGAACATGCAGCTaGAATGAAGGCGTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: STLQNCELHLPWRELLGKYRTCS*NEGVEL
Trigger: GAGCTCCACGCCTTCATTGCAGCTGCATGTTCGATA...CTTGCCTAGTAGTTCTCTCCAGGGCAAATGAAGCTCACAGTTTTGCAAGGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR CCA 90 bp TTCTTTTTCAGAATATCTACCTCTACTGGGATAAGATCACGTTTCTTTACTGTGCCCGGGGGCTGCGAGTaGAGGCGGTGCCTGCTTAGA +
Preference number: 4 (lower is better)
Translates to: FFFRISTSTGIRSRFFTVPGGCE*RRCLLR
Trigger: TCTAAGCAGGCACCGCCTCCACTCGCAGCCCCCGGG...CACAGTAAAGAAACGTGATCTTATCCCAGTAGAGGTAGATATTCTGAAAAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR CCA 90 bp AAGCTCTGGGGAGCAGCTGTAAATACAGATGAAGCTGTGCTCACTCACCCACCGTTCAAACAACTGGTCTaGATATGTGAGACCTGCAGA +
Preference number: 4 (lower is better)
Translates to: KLWGAAVNTDEAVLTHPPFKQLV*ICETCR
Trigger: TCTGCAGGTCTCACATATCCAGACCAGTTGTTTGAA...CGGTGGGTGAGTGAGCACAGCTTCATCTGTATTTACAGCTGCTCCCCAGAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR CCA 90 bp GAACATCCCCTTAAATGGTACATATTGAGGCAAGGCGGCCAGCTGTCTCCTTTATCTCCTTTAACTAGATaGAGTCTGGCCAGGTCACGG +
Preference number: 4 (lower is better)
Translates to: EHPLKWYILRQGGQLSPLSPLTR*SLARSR
Trigger: CCGTGACCTGGCCAGACTCCATCTAGTTAAAGGAGA...TAAAGGAGACAGCTGGCCGCCTTGCCTCAATATGTACCATTTAAGGGGATGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR CCA 90 bp AAGCTCTGGGGAGCAGCTGTAAATACAGATGAAGCTGTGCTCACTCACCCACCGGAACATCCCCTTAAATaGTACATATTGAGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: KLWGAAVNTDEAVLTHPPEHPLK*YILRQG
Trigger: GCCTTGCCTCAATATGTACCATTTAAGGGGATGTTC...CGGTGGGTGAGTGAGCACAGCTTCATCTGTATTTACAGCTGCTCCCCAGAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR TCA 90 bp TCCACCTTGCAAAACTGTGAGCTTCATTTGCCCTGGAGAGAACTACTAGGCAAGTTTTGCCACATCTACTaGCACCACGGTTTGATCCTC +
Preference number: 4 (lower is better)
Translates to: STLQNCELHLPWRELLGKFCHIY*HHGLIL
Trigger: GAGGATCAAACCGTGGTGTCAGTAGATGTGGCAAAA...CTTGCCTAGTAGTTCTCTCCAGGGCAAATGAAGCTCACAGTTTTGCAAGGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR TCA 90 bp GAACATCCCCTTAAATGGTACATATTGAGGCAAGGCGGCCAGCTGTCTCCTTTATTAAATGGTACATATTaGGGCAAGGCGGCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: EHPLKWYILRQGGQLSPLLNGTY*GKAASC
Trigger: ACAGCTGGCCGCCTTGCCTCAATATGTACCATTTAA...TAAAGGAGACAGCTGGCCGCCTTGCCTCAATATGTACCATTTAAGGGGATGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR TCA 90 bp TCCACCTTGCAAAACTGTGAGCTTCATTTGCCCTGGAGAGAACTACTAGGCAAGAGCTGTAAATACAGATaGAGCTGTGCTCACTCACCC +
Preference number: 4 (lower is better)
Translates to: STLQNCELHLPWRELLGKSCKYR*SCAHSP
Trigger: GGGTGAGTGAGCACAGCTTCATCTGTATTTACAGCT...CTTGCCTAGTAGTTCTCTCCAGGGCAAATGAAGCTCACAGTTTTGCAAGGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR GCA 90 bp GAACATCCCCTTAAATGGTACATATTGAGGCAAGGCGGCCAGCTGTCTCCTTTAGCCCGGGTCACTTTCTaGAAGGACATTCATGGTTTT +
Preference number: 4 (lower is better)
Translates to: EHPLKWYILRQGGQLSPLARVTF*KDIHGF
Trigger: AAAACCATGAATGTCCTTGCAGAAAGTGACCCGGGC...TAAAGGAGACAGCTGGCCGCCTTGCCTCAATATGTACCATTTAAGGGGATGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR CCA 90 bp CTTGTAGTGTCCTCAAATGGATGTCTGTGGCCAGGCGCACAGAGAACATCCCCTTTTTCAGTATTTGGTTaGGCTCCTTCAGAAGATCCA +
Preference number: 4 (lower is better)
Translates to: LVVSSNGCLWPGAQRTSPFSVFG*APSEDP
Trigger: TGGATCTTCTGAAGGAGCCCAACCAAATACTGAAAA...AGGGGATGTTCTCTGTGCGCCTGGCCACAGACATCCATTTGAGGACACTACAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR CCA 90 bp GGCTGTGAAGCAGGTGTATTGTATCGAACATGCAGCTGCAATGAAGGCGTGGAGGTGCTTTCAAACAACTaGTCTGGATATGTGAGACCT +
Preference number: 4 (lower is better)
Translates to: GCEAGVLYRTCSCNEGVEVLSNN*SGYVRP
Trigger: AGGTCTCACATATCCAGACCAGTTGTTTGAAAGCAC...CTCCACGCCTTCATTGCAGCTGCATGTTCGATACAATACACCTGCTTCACAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR CCA 90 bp GGCTGTGAAGCAGGTGTATTGTATCGAACATGCAGCTGCAATGAAGGCGTGGAGCTTACTTTGCCTGTATaGAACAAAGGCAGTCTACTC +
Preference number: 4 (lower is better)
Translates to: GCEAGVLYRTCSCNEGVELTLPV*NKGSLL
Trigger: GAGTAGACTGCCTTTGTTCCATACAGGCAAAGTAAG...CTCCACGCCTTCATTGCAGCTGCATGTTCGATACAATACACCTGCTTCACAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR GCA 90 bp CAGGTGTATTGTATCGAACATGCAGCTGCAATGAAGGCGTGGAGCTCAGGAGAATGTACGTTGTACTGTTaGAGCCCTCTAACAATACAC +
Preference number: 4 (lower is better)
Translates to: QVYCIEHAAAMKAWSSGECTLYC*SPLTIH
Trigger: GTGTATTGTTAGAGGGCTGCAACAGTACAACGTACA...TTCTCCTGAGCTCCACGCCTTCATTGCAGCTGCATGTTCGATACAATACACCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR GCA 90 bp TCCACCTTGCAAAACTGTGAGCTTCATTTGCCCTGGAGAGAACTACTAGGCAAGGTATTGTATCGAACATaGAGCTGCAATGAAGGCGTG +
Preference number: 4 (lower is better)
Translates to: STLQNCELHLPWRELLGKVLYRT*SCNEGV
Trigger: CACGCCTTCATTGCAGCTGCATGTTCGATACAATAC...CTTGCCTAGTAGTTCTCTCCAGGGCAAATGAAGCTCACAGTTTTGCAAGGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR TCA 90 bp TCCACCTTGCAAAACTGTGAGCTTCATTTGCCCTGGAGAGAACTACTAGGCAAGAGGTGTGACAAGCCTTaGTATTCATCAAACAGCATC +
Preference number: 4 (lower is better)
Translates to: STLQNCELHLPWRELLGKRCDKP*YSSNSI
Trigger: GATGCTGTTTGATGAATATCAAGGCTTGTCACACCT...CTTGCCTAGTAGTTCTCTCCAGGGCAAATGAAGCTCACAGTTTTGCAAGGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR GCA 90 bp AAGCTCTGGGGAGCAGCTGTAAATACAGATGAAGCTGTGCTCACTCACCCACCGTCTCAATATTGTCTGTaGAAAATTGCTTGTAGTGTC +
Preference number: 4 (lower is better)
Translates to: KLWGAAVNTDEAVLTHPPSQYCL*KIACSV
Trigger: GACACTACAAGCAATTTTGCACAGACAATATTGAGA...CGGTGGGTGAGTGAGCACAGCTTCATCTGTATTTACAGCTGCTCCCCAGAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR GCA 90 bp CAGGTGTATTGTATCGAACATGCAGCTGCAATGAAGGCGTGGAGCTCAGGAGAAAAAATATCCTTACTTTaGCTGTATGGAACAAAGGCA +
Preference number: 4 (lower is better)
Translates to: QVYCIEHAAAMKAWSSGEKISLL*LYGTKA
Trigger: TGCCTTTGTTCCATACAGGCAAAGTAAGGATATTTT...TTCTCCTGAGCTCCACGCCTTCATTGCAGCTGCATGTTCGATACAATACACCTG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR TCA 90 bp TTCTTTTTCAGAATATCTACCTCTACTGGGATAAGATCACGTTTCTTTACTGTGACTGCCGTCAATCCATaGCCTACTGTGGCAGATGCT +
Preference number: 4 (lower is better)
Translates to: FFFRISTSTGIRSRFFTVTAVNP*PTVADA
Trigger: AGCATCTGCCACAGTAGGTCATGGATTGACGGCAGT...CACAGTAAAGAAACGTGATCTTATCCCAGTAGAGGTAGATATTCTGAAAAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR TCA 90 bp TTCTTTTTCAGAATATCTACCTCTACTGGGATAAGATCACGTTTCTTTACTGTGTTTGAACCACATTGGTaGTGGCAGACAGCATACCCC +
Preference number: 4 (lower is better)
Translates to: FFFRISTSTGIRSRFFTVFEPHW*WQTAYP
Trigger: GGGGTATGCTGTCTGCCATCACCAATGTGGTTCAAA...CACAGTAAAGAAACGTGATCTTATCCCAGTAGAGGTAGATATTCTGAAAAAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS CCA 90 bp ATCGGATGGCAGAGGCGAGGGCTAGCCGACTGGGTGGAGGGGGCCTaGGGATCTGCGGTAGGGAGTGGGACCCATCCCGGGGGCTGCGAG +
Preference number: 5 (lower is better)
Translates to: IGWQRRGLADWVEGA*GSAVGSGTHPGGCE
Trigger: CTCGCAGCCCCCGGGATGGGTCCCACTCCCTACCGCAGATCCCCAGGCCCCCTCCACCCAGTCGGCTAGCCCTCGCCTCTGCCATCCGAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS CCA 90 bp CCCATCCCGGGGGCTGCGAGTGGAGGCGGTGCCTGCTTAGAGTGTTaGCTGGACTGGAAGAGCAGGCAGGGCGTGGGTCGGCGCTCAGGC +
Preference number: 5 (lower is better)
Translates to: PIPGAASGGGACLEC*LDWKSRQGVGRRSG
Trigger: GCCTGAGCGCCGACCCACGCCCTGCCTGCTCTTCCAGTCCAGCCAACACTCTAAGCAGGCACCGCCTCCACTCGCAGCCCCCGGGATGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS CCA 90 bp GGGGCTGCGAGTGGAGGCGGTGCCTGCTTAGAGTGTTGGCTGGACTaGAAGAGCAGGCAGGGCGTGGGTCGGCGCTCAGGCGGCCGAGTA +
Preference number: 5 (lower is better)
Translates to: GAASGGGACLECWLD*KSRQGVGRRSGGRV
Trigger: TACTCGGCCGCCTGAGCGCCGACCCACGCCCTGCCTGCTCTTCCAGTCCAGCCAACACTCTAAGCAGGCACCGCCTCCACTCGCAGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS GCA 90 bp GCGGTAGGGAGTGGGACCCATCCCGGGGGCTGCGAGTGGAGGCGGTaGCTGCTTAGAGTGTTGGCTGGACTGGAAGAGCAGGCAGGGCGT +
Preference number: 5 (lower is better)
Translates to: AVGSGTHPGGCEWRR*LLRVLAGLEEQAGR
Trigger: ACGCCCTGCCTGCTCTTCCAGTCCAGCCAACACTCTAAGCAGGCACCGCCTCCACTCGCAGCCCCCGGGATGGGTCCCACTCCCTACCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS CCA 90 bp TGGGGATCTGCGGTAGGGAGTGGGACCCATCCCGGGGGCTGCGAGTaGAGGCGGTGCCTGCTTAGAGTGTTGGCTGGACTGGAAGAGCAG +
Preference number: 5 (lower is better)
Translates to: WGSAVGSGTHPGGCE*RRCLLRVLAGLEEQ
Trigger: CTGCTCTTCCAGTCCAGCCAACACTCTAAGCAGGCACCGCCTCCACTCGCAGCCCCCGGGATGGGTCCCACTCCCTACCGCAGATCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR CAA 90 bp CACTCACCCACCGCTCACCCCCTGCTGTGTGGCCTGGTTCCTAACCAGTGCCACTGCAGTGAGCCGAGATaGTGCCAACGCACTCCAGCC +
Preference number: 5 (lower is better)
Translates to: HSPTAHPLLCGLVPNQCHCSEPR*CQRTPA
Trigger: GGCTGGAGTGCGTTGGCACAATCTCGGCTCACTGCA...GTGGCACTGGTTAGGAACCAGGCCACACAGCAGGGGGTGAGCGGTGGGTGAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR CAA 90 bp CACCCCCTGCTGTGTGGCCTGGTTCCTAACCAGTGCCACGGACTGGTACTGGTCCTCTCCATGAGCGTCTaGGTCCGCTTAAAGCCCGGG +
Preference number: 5 (lower is better)
Translates to: HPLLCGLVPNQCHGLVLVLSMSV*VRLKPG
Trigger: CCCGGGCTTTAAGCGGACCAAGACGCTCATGGAGAG...GACCAGTACCAGTCCGTGGCACTGGTTAGGAACCAGGCCACACAGCAGGGGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS CCA 90 bp CATCCTTCAGGATGTGGCAGCTCCCCCAACATTACAGCCTGCAGCTaGGGTAGACTAAGTGGAGGTTGTAGCAGCCTGCCCGCCAGCCGC +
Preference number: 5 (lower is better)
Translates to: HPSGCGSSPNITACS*GRLSGGCSSLPASR
Trigger: GCGGCTGGCGGGCAGGCTGCTACAACCTCCACTTAGTCTACCCCAGCTGCAGGCTGTAATGTTGGGGGAGCTGCCACATCCTGAAGGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508737.1
CDS-3UTR CAA 90 bp TCAGGAGAAGCAGCCACTGACAATGCCCCTCCTGGCCGCAGGGTCTTCTGTGCACCCATCCTCCTCCACTaGGAGGGGAATCCACAGCCA +
Preference number: 5 (lower is better)
Translates to: SGEAATDNAPPGRRVFCAPILLH*EGNPQP
Trigger: TGGCTGTGGATTCCCCTCCAAGTGGAGGAGGATGGG...TGCACAGAAGACCCTGCGGCCAGGAGGGGCATTGTCAGTGGCTGCTTCTCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR CAA 90 bp CACCCCCTGCTGTGTGGCCTGGTTCCTAACCAGTGCCACGGACTGGTACTGGTCTGCCTGCTTAGAGTGTaGGCTGGACTGGAAGAGCAG +
Preference number: 5 (lower is better)
Translates to: HPLLCGLVPNQCHGLVLVCLLRV*AGLEEQ
Trigger: CTGCTCTTCCAGTCCAGCCAACACTCTAAGCAGGCA...GACCAGTACCAGTCCGTGGCACTGGTTAGGAACCAGGCCACACAGCAGGGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR CAA 90 bp CACCCCCTGCTGTGTGGCCTGGTTCCTAACCAGTGCCACGGACTGGTACTGGTCTGGGGTCAGCTGGTGTaGGCTCATGTGAAACTGCAG +
Preference number: 5 (lower is better)
Translates to: HPLLCGLVPNQCHGLVLVWGQLV*AHVKLQ
Trigger: CTGCAGTTTCACATGAGCCAACACCAGCTGACCCCA...GACCAGTACCAGTCCGTGGCACTGGTTAGGAACCAGGCCACACAGCAGGGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR CAA 90 bp CACTCACCCACCGCTCACCCCCTGCTGTGTGGCCTGGTTCCTAACCAGTGCCACCTCTTCATGGCCTTATaGAGTTTGTCAGGTGTGGCC +
Preference number: 5 (lower is better)
Translates to: HSPTAHPLLCGLVPNQCHLFMAL*SLSGVA
Trigger: GGCCACACCTGACAAACTCAATAAGGCCATGAAGAG...GTGGCACTGGTTAGGAACCAGGCCACACAGCAGGGGGTGAGCGGTGGGTGAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR CAA 90 bp AAGCTCTGGGGAGCAGCTGTAAATACAGATGAAGCTGTGCTCACTCACCCACCGTCAGTCACGTCTCCATaGAGAGGGGGCTCCAGGGCG +
Preference number: 5 (lower is better)
Translates to: KLWGAAVNTDEAVLTHPPSVTSP*RGGSRA
Trigger: CGCCCTGGAGCCCCCTCTCAATGGAGACGTGACTGA...CGGTGGGTGAGTGAGCACAGCTTCATCTGTATTTACAGCTGCTCCCCAGAGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR CAA 90 bp CACTCACCCACCGCTCACCCCCTGCTGTGTGGCCTGGTTCCTAACCAGTGCCACCATCCTGTATGTACGTaGTACTGTTGCAGCCCTCTA +
Preference number: 5 (lower is better)
Translates to: HSPTAHPLLCGLVPNQCHHPVCT*YCCSPL
Trigger: TAGAGGGCTGCAACAGTACAACGTACATACAGGATG...GTGGCACTGGTTAGGAACCAGGCCACACAGCAGGGGGTGAGCGGTGGGTGAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS TCA 90 bp CGGAATCAATACATTCAGCAAGTGTATCCTCAGTCACGTCTCCATTaGGAGGGGGCTCCAGGGCGTTGGCATCCTGAGGCTGCACAGGGG +
Preference number: 5 (lower is better)
Translates to: RNQYIQQVYPQSRLH*EGAPGRWHPEAAQG
Trigger: CCCCTGTGCAGCCTCAGGATGCCAACGCCCTGGAGCCCCCTCTCAATGGAGACGTGACTGAGGATACACTTGCTGAATGTATTGATTCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358869.5
ENST00000510213.5
CDS CCA 90 bp GATGGAGTCTGGCCAGGTCACGGCTGTGCTTTCAAACAACTGGTCTaGATATGTGAGACCTGCAGAACAGGCAGCAGCAGCTGGAAGGCA +
Preference number: 5 (lower is better)
Translates to: DGVWPGHGCAFKQLV*ICETCRTGSSSWKA
Trigger: TGCCTTCCAGCTGCTGCTGCCTGTTCTGCAGGTCTCACATATCCAGACCAGTTGTTTGAAAGCACAGCCGTGACCTGGCCAGACTCCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358869.5
ENST00000508737.1
CDS-3UTR CAA 90 bp CACTCACCCACCGCTCACCCCCTGCTGTGTGGCCTGGTTCCTAACCAGTGCCACCTCCTTTTTGTCTTCTaGAGGGTCTTGAGATTTCTC +
Preference number: 5 (lower is better)
Translates to: HSPTAHPLLCGLVPNQCHLLFVF*RVLRFL
Trigger: GAGAAATCTCAAGACCCTCAAGAAGACAAAAAGGAG...GTGGCACTGGTTAGGAACCAGGCCACACAGCAGGGGGTGAGCGGTGGGTGAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR CAA 90 bp TCAGGAGAAGCAGCCACTGACAATGCCCCTCCTGGCCGCAGGGTCTTCTGTGCATTGCTTTCGCTTTCATaGGACAGAATTTCCAGGGCT +
Preference number: 5 (lower is better)
Translates to: SGEAATDNAPPGRRVFCALLSLS*DRISRA
Trigger: AGCCCTGGAAATTCTGTCCAATGAAAGCGAAAGCAA...TGCACAGAAGACCCTGCGGCCAGGAGGGGCATTGTCAGTGGCTGCTTCTCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR CAA 90 bp CACCCCCTGCTGTGTGGCCTGGTTCCTAACCAGTGCCACGGACTGGTACTGGTCATGTACGTTGTACTGTaGCAGCCCTCTAACAATACA +
Preference number: 5 (lower is better)
Translates to: HPLLCGLVPNQCHGLVLVMYVVL*QPSNNT
Trigger: TGTATTGTTAGAGGGCTGCAACAGTACAACGTACAT...GACCAGTACCAGTCCGTGGCACTGGTTAGGAACCAGGCCACACAGCAGGGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS CCA 90 bp CAACTGGTCTGGATATGTGAGACCTGCAGAACAGGCAGCAGCAGCTaGAAGGCATCCTGTATGTACGTTGTACTGTTGCAGCCCTCTAAC +
Preference number: 5 (lower is better)
Translates to: QLVWICETCRTGSSS*KASCMYVVLLQPSN
Trigger: GTTAGAGGGCTGCAACAGTACAACGTACATACAGGATGCCTTCCAGCTGCTGCTGCCTGTTCTGCAGGTCTCACATATCCAGACCAGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358869.5
ENST00000508737.1
ENST00000515037.5
CDS CCA 90 bp TGGTACATATTGAGGCAAGGCGGCCAGCTGTCTCCTTTAACTAGATaGAGTCTGGCCAGGTCACGGCTGTGCTTTCAAACAACTGGTCTG +
Preference number: 5 (lower is better)
Translates to: WYILRQGGQLSPLTR*SLARSRLCFQTTGL
Trigger: CAGACCAGTTGTTTGAAAGCACAGCCGTGACCTGGCCAGACTCCATCTAGTTAAAGGAGACAGCTGGCCGCCTTGCCTCAATATGTACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358869.5
ENST00000508737.1
CDS-3UTR CAA 90 bp GGCTGTGAAGCAGGTGTATTGTATCGAACATGCAGCTGCAATGAAGGCGTGGAGATGGCCTTATTGAGTTaGTCAGGTGTGGCCGCCACA +
Preference number: 5 (lower is better)
Translates to: GCEAGVLYRTCSCNEGVEMALLS*SGVAAT
Trigger: TGTGGCGGCCACACCTGACAAACTCAATAAGGCCAT...CTCCACGCCTTCATTGCAGCTGCATGTTCGATACAATACACCTGCTTCACAGCC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS GCA 90 bp TCTCTCCATGAGCGTCTTGGTCCGCTTAAAGCCCGGGTCACTTTCTaGAAGGACATTCATGGTTTTCTTGCCGATGAATTCCAACGCATC +
Preference number: 5 (lower is better)
Translates to: SLHERLGPLKARVTF*KDIHGFLADEFQRI
Trigger: GATGCGTTGGAATTCATCGGCAAGAAAACCATGAATGTCCTTGCAGAAAGTGACCCGGGCTTTAAGCGGACCAAGACGCTCATGGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358869.5
ENST00000515037.5
CDS-3UTR CAA 90 bp GGCTGTGAAGCAGGTGTATTGTATCGAACATGCAGCTGCAATGAAGGCGTGGAGCTCCGTTTTCAGTATTaGGTTGGGCTCCTTCAGAAG +
Preference number: 5 (lower is better)
Translates to: GCEAGVLYRTCSCNEGVELRFQY*VGLLQK
Trigger: CTTCTGAAGGAGCCCAACCAAATACTGAAAACGGAG...CTCCACGCCTTCATTGCAGCTGCATGTTCGATACAATACACCTGCTTCACAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR CAA 90 bp CAGGTGTATTGTATCGAACATGCAGCTGCAATGAAGGCGTGGAGCTCAGGAGAACTTAAATGGTACATATaGAGGCAAGGCGGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: QVYCIEHAAAMKAWSSGELKWYI*RQGGQL
Trigger: CAGCTGGCCGCCTTGCCTCAATATGTACCATTTAAG...TTCTCCTGAGCTCCACGCCTTCATTGCAGCTGCATGTTCGATACAATACACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS TCA 90 bp TCTGTTCTTGCAGGGGTATTTCGGATCTGGGTTCTGCCTCAAGGCTaGCGGAATCAATACATTCAGCAAGTGTATCCTCAGTCACGTCTC +
Preference number: 5 (lower is better)
Translates to: SVLAGVFRIWVLPQG*RNQYIQQVYPQSRL
Trigger: GAGACGTGACTGAGGATACACTTGCTGAATGTATTGATTCCGTCAGCCTTGAGGCAGAACCCAGATCCGAAATACCCCTGCAAGAACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358869.5
ENST00000510213.5
CDS TCA 90 bp CTTGCTTTCGCTTTCATTGGACAGAATTTCCAGGGCTTCCAGGTGTaGCAAGCCTTGATATTCATCAAACAGCATCCCGTAGTGCGCGGT +
Preference number: 5 (lower is better)
Translates to: LAFAFIGQNFQGFQV*QALIFIKQHPVVRG
Trigger: ACCGCGCACTACGGGATGCTGTTTGATGAATATCAAGGCTTGTCACACCTGGAAGCCCTGGAAATTCTGTCCAATGAAAGCGAAAGCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358869.5
ENST00000512889.1
ENST00000515037.5
CDS-3UTR CAA 90 bp CTTGTAGTGTCCTCAAATGGATGTCTGTGGCCAGGCGCACAGAGAACATCCCCTACTTTTACCTGTGTTTaGAACCACATTGGTGATGGC +
Preference number: 5 (lower is better)
Translates to: LVVSSNGCLWPGAQRTSPTFTCV*NHIGDG
Trigger: GCCATCACCAATGTGGTTCAAAACACAGGTAAAAGT...AGGGGATGTTCTCTGTGCGCCTGGCCACAGACATCCATTTGAGGACACTACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR CAA 90 bp AAGCTCTGGGGAGCAGCTGTAAATACAGATGAAGCTGTGCTCACTCACCCACCGGTCTTCTTGAGGGTCTaGAGATTTCTCTTCCTTTTC +
Preference number: 5 (lower is better)
Translates to: KLWGAAVNTDEAVLTHPPVFLRV*RFLFLF
Trigger: GAAAAGGAAGAGAAATCTCAAGACCCTCAAGAAGAC...CGGTGGGTGAGTGAGCACAGCTTCATCTGTATTTACAGCTGCTCCCCAGAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR CAA 90 bp TCCACCTTGCAAAACTGTGAGCTTCATTTGCCCTGGAGAGAACTACTAGGCAAGACCTCGGCCTTCTTGTaGCTCCCAACAGTGGTTAAA +
Preference number: 5 (lower is better)
Translates to: STLQNCELHLPWRELLGKTSAFL*LPTVVK
Trigger: TTTAACCACTGTTGGGAGCAACAAGAAGGCCGAGGT...CTTGCCTAGTAGTTCTCTCCAGGGCAAATGAAGCTCACAGTTTTGCAAGGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS TCA 90 bp AGCCCGGGTCACTTTCTGCAAGGACATTCATGGTTTTCTTGCCGATaGATTCCAACGCATCAAGGCCTCCAGTTAAGACACTTTTACCTG +
Preference number: 5 (lower is better)
Translates to: SPGHFLQGHSWFSCR*IPTHQGLQLRHFYL
Trigger: CAGGTAAAAGTGTCTTAACTGGAGGCCTTGATGCGTTGGAATTCATCGGCAAGAAAACCATGAATGTCCTTGCAGAAAGTGACCCGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358869.5
ENST00000515037.5
CDS-3UTR CAA 90 bp CAGGTGTATTGTATCGAACATGCAGCTGCAATGAAGGCGTGGAGCTCAGGAGAAGTTTTCAGTATTTGGTaGGGCTCCTTCAGAAGATCC +
Preference number: 5 (lower is better)
Translates to: QVYCIEHAAAMKAWSSGEVFSIW*GSFRRS
Trigger: GGATCTTCTGAAGGAGCCCAACCAAATACTGAAAAC...TTCTCCTGAGCTCCACGCCTTCATTGCAGCTGCATGTTCGATACAATACACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR CAA 90 bp GAACATCCCCTTAAATGGTACATATTGAGGCAAGGCGGCCAGCTGTCTCCTTTACTTCTTCGGACACTTTaGCCACATCTACTGACACCA +
Preference number: 5 (lower is better)
Translates to: EHPLKWYILRQGGQLSPLLLRTL*PHLLTP
Trigger: TGGTGTCAGTAGATGTGGCAAAAGTGTCCGAAGAAG...TAAAGGAGACAGCTGGCCGCCTTGCCTCAATATGTACCATTTAAGGGGATGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR CAA 90 bp TCCACCTTGCAAAACTGTGAGCTTCATTTGCCCTGGAGAGAACTACTAGGCAAGTGTGAAGCAGGTGTATaGTATCGAACATGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: STLQNCELHLPWRELLGKCEAGV*YRTCSC
Trigger: GCAGCTGCATGTTCGATACAATACACCTGCTTCACA...CTTGCCTAGTAGTTCTCTCCAGGGCAAATGAAGCTCACAGTTTTGCAAGGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS TCA 90 bp TTCTTCCTTCTTTGTTTCTTCTTCGGACACTTTTGCCACATCTACTaGCACCACGGTTTGATCCTCTTCCACCCAGTCATGAGCCCTCTT +
Preference number: 5 (lower is better)
Translates to: FFLLCFFFGHFCHIY*HHGLILFHPVMSPL
Trigger: AAGAGGGCTCATGACTGGGTGGAAGAGGATCAAACCGTGGTGTCAGTAGATGTGGCAAAAGTGTCCGAAGAAGAAACAAAGAAGGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358869.5
ENST00000508737.1
ENST00000515037.5
CDS-3UTR CAA 90 bp CTTGTAGTGTCCTCAAATGGATGTCTGTGGCCAGGCGCACAGAGAACATCCCCTATTTTATTAGAACTTTaGCTTGGTCCTGAGCTGGTT +
Preference number: 5 (lower is better)
Translates to: LVVSSNGCLWPGAQRTSPILLEL*LGPELV
Trigger: AACCAGCTCAGGACCAAGCAAAAGTTCTAATAAAAT...AGGGGATGTTCTCTGTGCGCCTGGCCACAGACATCCATTTGAGGACACTACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR CAA 90 bp GGCTGTGAAGCAGGTGTATTGTATCGAACATGCAGCTGCAATGAAGGCGTGGAGAAAGAGGCCACTTCATaGCACATTGCAGTAGTTAAT +
Preference number: 5 (lower is better)
Translates to: GCEAGVLYRTCSCNEGVEKEATS*HIAVVN
Trigger: ATTAACTACTGCAATGTGCAATGAAGTGGCCTCTTT...CTCCACGCCTTCATTGCAGCTGCATGTTCGATACAATACACCTGCTTCACAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR CAA 90 bp GAACATCCCCTTAAATGGTACATATTGAGGCAAGGCGGCCAGCTGTCTCCTTTAAACTGTGAGCTTCATTaGCCCTGGAGAGAACTACTA +
Preference number: 5 (lower is better)
Translates to: EHPLKWYILRQGGQLSPLNCELH*PWRELL
Trigger: TAGTAGTTCTCTCCAGGGCAAATGAAGCTCACAGTT...TAAAGGAGACAGCTGGCCGCCTTGCCTCAATATGTACCATTTAAGGGGATGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS TCA 90 bp TCAGTATTTGGTTGGGCTCCTTCAGAAGATCCAGAATTTACACCATaGATCCGTAGAGTGGCTCCTGCTTTTTCCTTGACTGCCGTCAAT +
Preference number: 5 (lower is better)
Translates to: SVFGWAPSEDPEFTP*IRRVAPAFSLTAVN
Trigger: ATTGACGGCAGTCAAGGAAAAAGCAGGAGCCACTCTACGGATTCATGGTGTAAATTCTGGATCTTCTGAAGGAGCCCAACCAAATACTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358869.5
ENST00000515037.5
CDS TCA 90 bp ACCACACGAGGGTGCAAATGCATTTTGTCCAGCCTATCATATCAATaGGCTTCCACCTCCCTTGTCATTCTGCTTGTATACAGTGAAGCT +
Preference number: 5 (lower is better)
Translates to: TTRGCKCILSSLSYQ*ASTSLVILLVYSEA
Trigger: AGCTTCACTGTATACAAGCAGAATGACAAGGGAGGTGGAAGCTCATTGATATGATAGGCTGGACAAAATGCATTTGCACCCTCGTGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513966.1
CDS-3UTR CAA 90 bp TTCTTTTTCAGAATATCTACCTCTACTGGGATAAGATCACGTTTCTTTACTGTGGACGACAGCAGAGATTaGCCCCAGGATCCCCAGCCT +
Preference number: 5 (lower is better)
Translates to: FFFRISTSTGIRSRFFTVDDSRD*PQDPQP
Trigger: AGGCTGGGGATCCTGGGGCAAATCTCTGCTGTCGTC...CACAGTAAAGAAACGTGATCTTATCCCAGTAGAGGTAGATATTCTGAAAAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR CAA 90 bp GAACATCCCCTTAAATGGTACATATTGAGGCAAGGCGGCCAGCTGTCTCCTTTAACATTCATGGTTTTCTaGCCGATGAATTCCAACGCA +
Preference number: 5 (lower is better)
Translates to: EHPLKWYILRQGGQLSPLTFMVF*PMNSNA
Trigger: TGCGTTGGAATTCATCGGCAAGAAAACCATGAATGT...TAAAGGAGACAGCTGGCCGCCTTGCCTCAATATGTACCATTTAAGGGGATGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS CCA 90 bp ATCTGTGGCTGCATCTGTTATTTCAGGGACTCCGTTTTCAGTATTTaGTTGGGCTCCTTCAGAAGATCCAGAATTTACACCATGAATCCG +
Preference number: 5 (lower is better)
Translates to: ICGCICYFRDSVFSI*LGSFRRSRIYTMNP
Trigger: CGGATTCATGGTGTAAATTCTGGATCTTCTGAAGGAGCCCAACCAAATACTGAAAACGGAGTCCCTGAAATAACAGATGCAGCCACAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358869.5
ENST00000515037.5
CDS-3UTR CAA 90 bp TTCTTTTTCAGAATATCTACCTCTACTGGGATAAGATCACGTTTCTTTACTGTGAGGACCTCGGCCTTCTaGTTGCTCCCAACAGTGGTT +
Preference number: 5 (lower is better)
Translates to: FFFRISTSTGIRSRFFTVRTSAF*LLPTVV
Trigger: AACCACTGTTGGGAGCAACAAGAAGGCCGAGGTCCT...CACAGTAAAGAAACGTGATCTTATCCCAGTAGAGGTAGATATTCTGAAAAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS CCA 90 bp TGCAAGCCTAGTGTTTATATCAAAGTCCATGGATATCAGGTAACTTaGACCACACGAGGGTGCAAATGCATTTTGTCCAGCCTATCATAT +
Preference number: 5 (lower is better)
Translates to: CKPSVYIKVHGYQVT*TTRGCKCILSSLSY
Trigger: ATATGATAGGCTGGACAAAATGCATTTGCACCCTCGTGTGGTCCAAGTTACCTGATATCCATGGACTTTGATATAAACACTAGGCTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513966.1
CDS-3UTR CAA 90 bp TTCTTTTTCAGAATATCTACCTCTACTGGGATAAGATCACGTTTCTTTACTGTGTCAGTAACTTCTGCTTaGTCTCCAGTGGCTAAGGTG +
Preference number: 5 (lower is better)
Translates to: FFFRISTSTGIRSRFFTVSVTSA*SPVAKV
Trigger: CACCTTAGCCACTGGAGACAAAGCAGAAGTTACTGA...CACAGTAAAGAAACGTGATCTTATCCCAGTAGAGGTAGATATTCTGAAAAAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS-3UTR CAA 90 bp TTCTTTTTCAGAATATCTACCTCTACTGGGATAAGATCACGTTTCTTTACTGTGCAGATAATTCTGTTCTaGCAGGGGTATTTCGGATCT +
Preference number: 5 (lower is better)
Translates to: FFFRISTSTGIRSRFFTVQIILF*QGYFGS
Trigger: AGATCCGAAATACCCCTGCAAGAACAGAATTATCTG...CACAGTAAAGAAACGTGATCTTATCCCAGTAGAGGTAGATATTCTGAAAAAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS CCA 72 bp GGGGCTGCGAGTGGAGGCGGTGCCTGCTTAGAGTGTTaGCTGGACTGGAAGAGCAGGCAGGGCGTGGGTCGG +
Preference number: 6 (lower is better)
Translates to: GAASGGGACLEC*LDWKSRQGVGR
Trigger: CCGACCCACGCCCTGCCTGCTCTTCCAGTCCAGCCAACACTCTAAGCAGGCACCGCCTCCACTCGCAGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS GCA 72 bp AGTGGGACCCATCCCGGGGGCTGCGAGTGGAGGCGGTaGCTGCTTAGAGTGTTGGCTGGACTGGAAGAGCAG +
Preference number: 6 (lower is better)
Translates to: SGTHPGGCEWRR*LLRVLAGLEEQ
Trigger: CTGCTCTTCCAGTCCAGCCAACACTCTAAGCAGGCACCGCCTCCACTCGCAGCCCCCGGGATGGGTCCCACT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358869.5
CDS CCA 72 bp GGATGTGGCAGCTCCCCCAACATTACAGCCTGCAGCTaGGGTAGACTAAGTGGAGGTTGTAGCAGCCTGCCC +
Preference number: 6 (lower is better)
Translates to: GCGSSPNITACS*GRLSGGCSSLP
Trigger: GGGCAGGCTGCTACAACCTCCACTTAGTCTACCCCAGCTGCAGGCTGTAATGTTGGGGGAGCTGCCACATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508737.1
CDS TCA 72 bp GACTGCCGTCAATCCATGACCTACTGTGGCAGATGCTaGCGACAGCAGAGATTTGCCCCAGGATCCCCAGCC +
Preference number: 6 (lower is better)
Translates to: DCRQSMTYCGRC*RQQRFAPGSPA
Trigger: GGCTGGGGATCCTGGGGCAAATCTCTGCTGTCGTCAGCATCTGCCACAGTAGGTCATGGATTGACGGCAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358869.5
ENST00000515037.5
CDS GCA 72 bp CCTTCAGGATGTGGCAGCTCCCCCAACATTACAGCCTaGAGCTGGGGTAGACTAAGTGGAGGTTGTAGCAGC +
Preference number: 6 (lower is better)
Translates to: PSGCGSSPNITA*SWGRLSGGCSS
Trigger: GCTGCTACAACCTCCACTTAGTCTACCCCAGCTGCAGGCTGTAATGTTGGGGGAGCTGCCACATCCTGAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508737.1
CDS CCA 72 bp TGGCCAGGTCACGGCTGTGCTTTCAAACAACTGGTCTaGATATGTGAGACCTGCAGAACAGGCAGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: WPGHGCAFKQLV*ICETCRTGSSS
Trigger: GCTGCTGCTGCCTGTTCTGCAGGTCTCACATATCCAGACCAGTTGTTTGAAAGCACAGCCGTGACCTGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358869.5
ENST00000508737.1
CDS CCA 72 bp TTGAGGCAAGGCGGCCAGCTGTCTCCTTTAACTAGATaGAGTCTGGCCAGGTCACGGCTGTGCTTTCAAACA +
Preference number: 6 (lower is better)
Translates to: LRQGGQLSPLTR*SLARSRLCFQT
Trigger: TGTTTGAAAGCACAGCCGTGACCTGGCCAGACTCCATCTAGTTAAAGGAGACAGCTGGCCGCCTTGCCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358869.5
ENST00000508737.1
CDS TCA 72 bp CACCATGAATCCGTAGAGTGGCTCCTGCTTTTTCCTTaGCTGCCGTCAATCCATGACCTACTGTGGCAGATG +
Preference number: 6 (lower is better)
Translates to: HHESVEWLLLFP*LPSIHDLLWQM
Trigger: CATCTGCCACAGTAGGTCATGGATTGACGGCAGTCAAGGAAAAAGCAGGAGCCACTCTACGGATTCATGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358869.5
ENST00000515037.5
CDS CAA 72 bp ACTTGGAGGGGAATCCACAGCCAGATAATTCTGTTCTaGCAGGGGTATTTCGGATCTGGGTTCTGCCTCAAG +
Preference number: 6 (lower is better)
Translates to: TWRGIHSQIILF*QGYFGSGFCLK
Trigger: CTTGAGGCAGAACCCAGATCCGAAATACCCCTGCAAGAACAGAATTATCTGGCTGTGGATTCCCCTCCAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358869.5
ENST00000510213.5
CDS CAA 72 bp CCCGGGTCACTTTCTGCAAGGACATTCATGGTTTTCTaGCCGATGAATTCCAACGCATCAAGGCCTCCAGTT +
Preference number: 6 (lower is better)
Translates to: PGSLSARTFMVF*PMNSNASRPPV
Trigger: AACTGGAGGCCTTGATGCGTTGGAATTCATCGGCAAGAAAACCATGAATGTCCTTGCAGAAAGTGACCCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358869.5
ENST00000515037.5
CDS CAA 90 bp CGCTTAAAGCCCGGGTCACTTTCTGCAAGGACATTCATGGTTTTCTaGCCGATGAATTCCAACGCATCAAGGCCTCCAGTTAAGACACTT +
Preference number: 6 (lower is better)
Translates to: RLKPGSLSARTFMVF*PMNSNASRPPVKTL
Trigger: AAGTGTCTTAACTGGAGGCCTTGATGCGTTGGAATTCATCGGCAAGAAAACCATGAATGTCCTTGCAGAAAGTGACCCGGGCTTTAAGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358869.5
ENST00000515037.5
CDS TCA 72 bp GGTTGGGCTCCTTCAGAAGATCCAGAATTTACACCATaGATCCGTAGAGTGGCTCCTGCTTTTTCCTTGACT +
Preference number: 6 (lower is better)
Translates to: GWAPSEDPEFTP*IRRVAPAFSLT
Trigger: AGTCAAGGAAAAAGCAGGAGCCACTCTACGGATTCATGGTGTAAATTCTGGATCTTCTGAAGGAGCCCAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358869.5
ENST00000515037.5
CDS TCA 72 bp CTTTGTTTCTTCTTCGGACACTTTTGCCACATCTACTaGCACCACGGTTTGATCCTCTTCCACCCAGTCATG +
Preference number: 6 (lower is better)
Translates to: LCFFFGHFCHIY*HHGLILFHPVM
Trigger: CATGACTGGGTGGAAGAGGATCAAACCGTGGTGTCAGTAGATGTGGCAAAAGTGTCCGAAGAAGAAACAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358869.5
ENST00000508737.1
ENST00000515037.5
CDS GCA 72 bp ATTCTGTTCTTGCAGGGGTATTTCGGATCTGGGTTCTaGCTCAAGGCTGACGGAATCAATACATTCAGCAAG +
Preference number: 6 (lower is better)
Translates to: ILFLQGYFGSGF*LKADGINTFSK
Trigger: CTTGCTGAATGTATTGATTCCGTCAGCCTTGAGGCAGAACCCAGATCCGAAATACCCCTGCAAGAACAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358869.5
ENST00000510213.5
CDS TCA 72 bp GCTTTCATTGGACAGAATTTCCAGGGCTTCCAGGTGTaGCAAGCCTTGATATTCATCAAACAGCATCCCGTA +
Preference number: 6 (lower is better)
Translates to: AFIGQNFQGFQV*QALIFIKQHPV
Trigger: TACGGGATGCTGTTTGATGAATATCAAGGCTTGTCACACCTGGAAGCCCTGGAAATTCTGTCCAATGAAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358869.5
ENST00000512889.1
ENST00000515037.5
CDS CAA 90 bp GATCTGTGGCTGCATCTGTTATTTCAGGGACTCCGTTTTCAGTATTaGGTTGGGCTCCTTCAGAAGATCCAGAATTTACACCATGAATCC +
Preference number: 6 (lower is better)
Translates to: DLWLHLLFQGLRFQY*VGLLQKIQNLHHES
Trigger: GGATTCATGGTGTAAATTCTGGATCTTCTGAAGGAGCCCAACCAAATACTGAAAACGGAGTCCCTGAAATAACAGATGCAGCCACAGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358869.5
ENST00000515037.5
CDS TCA 72 bp GGGTGCAAATGCATTTTGTCCAGCCTATCATATCAATaGGCTTCCACCTCCCTTGTCATTCTGCTTGTATAC +
Preference number: 6 (lower is better)
Translates to: GCKCILSSLSYQ*ASTSLVILLVY
Trigger: GTATACAAGCAGAATGACAAGGGAGGTGGAAGCTCATTGATATGATAGGCTGGACAAAATGCATTTGCACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513966.1
CDS CAA 72 bp TGTCCAGCCTATCATATCAATGAGCTTCCACCTCCCTaGTCATTCTGCTTGTATACAGTGAAGCTCTATTGC +
Preference number: 6 (lower is better)
Translates to: CPAYHINELPPP*SFCLYTVKLYC
Trigger: GCAATAGAGCTTCACTGTATACAAGCAGAATGACAAGGGAGGTGGAAGCTCATTGATATGATAGGCTGGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513966.1
CDS CAA 90 bp ATTTCTCTTCCTTTTCTTCCTTCTTTGTTTCTTCTTCGGACACTTTaGCCACATCTACTGACACCACGGTTTGATCCTCTTCCACCCAGT +
Preference number: 6 (lower is better)
Translates to: ISLPFLPSLFLLRTL*PHLLTPRFDPLPPS
Trigger: ACTGGGTGGAAGAGGATCAAACCGTGGTGTCAGTAGATGTGGCAAAAGTGTCCGAAGAAGAAACAAAGAAGGAAGAAAAGGAAGAGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358869.5
ENST00000508737.1
ENST00000515037.5
CDS CCA 72 bp AGTGTTTATATCAAAGTCCATGGATATCAGGTAACTTaGACCACACGAGGGTGCAAATGCATTTTGTCCAGC +
Preference number: 6 (lower is better)
Translates to: SVYIKVHGYQVT*TTRGCKCILSS
Trigger: GCTGGACAAAATGCATTTGCACCCTCGTGTGGTCCAAGTTACCTGATATCCATGGACTTTGATATAAACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513966.1
CDS CAA 72 bp AAAGAATCACTATTAGGCATCTCAGTAACTTCTGCTTaGTCTCCAGTGGCTAAGGTGTCACCAGCATCATCA +
Preference number: 6 (lower is better)
Translates to: KESLLGISVTSA*SPVAKVSPASS
Trigger: TGATGATGCTGGTGACACCTTAGCCACTGGAGACAAAGCAGAAGTTACTGAGATGCCTAATAGTGATTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358869.5
ENST00000510213.5
CDS CAA 72 bp CTGCATCTGTTATTTCAGGGACTCCGTTTTCAGTATTaGGTTGGGCTCCTTCAGAAGATCCAGAATTTACAC +
Preference number: 6 (lower is better)
Translates to: LHLLFQGLRFQY*VGLLQKIQNLH
Trigger: GTGTAAATTCTGGATCTTCTGAAGGAGCCCAACCAAATACTGAAAACGGAGTCCCTGAAATAACAGATGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358869.5
ENST00000515037.5
CDS CAA 90 bp TCCTCAGGTAAAGAATCACTATTAGGCATCTCAGTAACTTCTGCTTaGTCTCCAGTGGCTAAGGTGTCACCAGCATCATCAGACATTTTA +
Preference number: 6 (lower is better)
Translates to: SSGKESLLGISVTSA*SPVAKVSPASSDIL
Trigger: TAAAATGTCTGATGATGCTGGTGACACCTTAGCCACTGGAGACAAAGCAGAAGTTACTGAGATGCCTAATAGTGATTCTTTACCTGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358869.5
ENST00000510213.5
CDS CAA 72 bp ATCTGTTATTTCAGGGACTCCGTTTTCAGTATTTGGTaGGGCTCCTTCAGAAGATCCAGAATTTACACCATG +
Preference number: 6 (lower is better)
Translates to: ICYFRDSVFSIW*GSFRRSRIYTM
Trigger: CATGGTGTAAATTCTGGATCTTCTGAAGGAGCCCAACCAAATACTGAAAACGGAGTCCCTGAAATAACAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358869.5
ENST00000515037.5
CDS CAA 90 bp TCCTTCTCCTTAGCTTCCCTTAACATCTGCAGAAATACACAATGTTaGTACTCTGGATGTACATTTAAAAGCACCGTTTCCTGTGTAAGA +
Preference number: 6 (lower is better)
Translates to: SFSLASLNICRNTQC*YSGCTFKSTVSCVR
Trigger: TCTTACACAGGAAACGGTGCTTTTAAATGTACATCCAGAGTACAAACATTGTGTATTTCTGCAGATGTTAAGGGAAGCTAAGGAGAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512889.1
CDS CAA 72 bp TTAGCTTCCCTTAACATCTGCAGAAATACACAATGTTaGTACTCTGGATGTACATTTAAAAGCACCGTTTCC +
Preference number: 6 (lower is better)
Translates to: LASLNICRNTQC*YSGCTFKSTVS
Trigger: GGAAACGGTGCTTTTAAATGTACATCCAGAGTACAAACATTGTGTATTTCTGCAGATGTTAAGGGAAGCTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512889.1