Pregenerated sensors for FAM111B (Homo sapiens)
Ensembl gene IDs: ENSG00000189057Ensembl transcript IDs: ENST00000343597.4, ENST00000411426.1, ENST00000528234.5, ENST00000529618.5, ENST00000534403.5, ENST00000620384.1
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTTCTTCTTTGTGTCCATGTGTACTCAATATTTAGCTTCCACTTATaGGAGAACATGTGGTACTTGGCTTTCTGTTCCTGCATTAGTTCG | + |
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Preference number: 1 (lower is better) Translates to: FLLCVHVYSIFSFHL*ENMWYLAFCSCISS Trigger: CGAACTAATGCAGGAACAGAAAGCCAAGTACCACATGTTCTCTCATAAGTGGAAGCTAAATATTGAGTACACATGGACACAAAGAAGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000343597.4 ENST00000411426.1 ENST00000620384.1 |
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| 3UTR-3UTR GCA 90 bp | TTGGCTTTCTGTTCCTGCATTAGTTCGCTTAGGATAATGACCTTCAGTTCCATCGCATTCCCCTTTCTCTaGAACCTCGCCAGCATCTGT | + |
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Preference number: 2 (lower is better) Translates to: LAFCSCISSLRIMTFSSIAFPFL*NLASIC Trigger: ACAGATGCTGGCGAGGTTGCAGAGAAAGGGGAATGC...GATGGAACTGAAGGTCATTATCCTAAGCGAACTAATGCAGGAACAGAAAGCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000343597.4 ENST00000411426.1 ENST00000620384.1 |
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| 3UTR-3UTR TCA 90 bp | TTGGCTTTCTGTTCCTGCATTAGTTCGCTTAGGATAATGACCTTCAGTTCCATCGCTTTCCACAATGGCTaGACTAATTTATTTTCCCAC | + |
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Preference number: 2 (lower is better) Translates to: LAFCSCISSLRIMTFSSIAFHNG*TNLFSH Trigger: GTGGGAAAATAAATTAGTTCAGCCATTGTGGAAAGC...GATGGAACTGAAGGTCATTATCCTAAGCGAACTAATGCAGGAACAGAAAGCCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000343597.4 ENST00000411426.1 ENST00000620384.1 |
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| 3UTR-3UTR TCA 90 bp | TTGGCTTTCTGTTCCTGCATTAGTTCGCTTAGGATAATGACCTTCAGTTCCATCATGAGATTGCTGGCTTaGATGGTAGCTGTTTTAAGT | + |
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Preference number: 2 (lower is better) Translates to: LAFCSCISSLRIMTFSSIMRLLA*MVAVLS Trigger: ACTTAAAACAGCTACCATTCAAGCCAGCAATCTCAT...GATGGAACTGAAGGTCATTATCCTAAGCGAACTAATGCAGGAACAGAAAGCCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000343597.4 ENST00000411426.1 ENST00000620384.1 |
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| 3UTR-3UTR TCA 90 bp | TTGGCTTTCTGTTCCTGCATTAGTTCGCTTAGGATAATGACCTTCAGTTCCATCGATGGGCATTTAGGTTaGTTTCATGTTTTGCTATTG | + |
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Preference number: 2 (lower is better) Translates to: LAFCSCISSLRIMTFSSIDGHLG*FHVLLL Trigger: CAATAGCAAAACATGAAATCAACCTAAATGCCCATC...GATGGAACTGAAGGTCATTATCCTAAGCGAACTAATGCAGGAACAGAAAGCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000343597.4 ENST00000411426.1 ENST00000620384.1 |
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| 3UTR-3UTR GCA 90 bp | TTGGCTTTCTGTTCCTGCATTAGTTCGCTTAGGATAATGACCTTCAGTTCCATCTTTGTTCATGTCCTTTaGCCACTTTTTAATGGGGTT | + |
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Preference number: 2 (lower is better) Translates to: LAFCSCISSLRIMTFSSIFVHVL*PLFNGV Trigger: AACCCCATTAAAAAGTGGGCAAAGGACATGAACAAA...GATGGAACTGAAGGTCATTATCCTAAGCGAACTAATGCAGGAACAGAAAGCCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000343597.4 ENST00000411426.1 ENST00000620384.1 |
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| 3UTR-3UTR GCA 90 bp | TTGGCTTTCTGTTCCTGCATTAGTTCGCTTAGGATAATGACCTTCAGTTCCATCTATGGCTGTGTAGTATaGTATGGTGTATATGTGTCA | + |
|
Preference number: 2 (lower is better) Translates to: LAFCSCISSLRIMTFSSIYGCVV*YGVYVS Trigger: TGACACATATACACCATAGCATACTACACAGCCATA...GATGGAACTGAAGGTCATTATCCTAAGCGAACTAATGCAGGAACAGAAAGCCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000343597.4 ENST00000411426.1 ENST00000620384.1 |
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| 3UTR-3UTR CCA 90 bp | TTGGCTTTCTGTTCCTGCATTAGTTCGCTTAGGATAATGACCTTCAGTTCCATCCTGTGTAGTATGCTATaGTGTATATGTGTCACATTT | + |
|
Preference number: 2 (lower is better) Translates to: LAFCSCISSLRIMTFSSILCSML*CICVTF Trigger: AAATGTGACACATATACACCATAGCATACTACACAG...GATGGAACTGAAGGTCATTATCCTAAGCGAACTAATGCAGGAACAGAAAGCCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000343597.4 ENST00000411426.1 ENST00000620384.1 |
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| 3UTR-3UTR CAA 90 bp | TTGGCTTTCTGTTCCTGCATTAGTTCGCTTAGGATAATGACCTTCAGTTCCATCCATGAGATTGCTGGCTaGAATGGTAGCTGTTTTAAG | + |
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Preference number: 3 (lower is better) Translates to: LAFCSCISSLRIMTFSSIHEIAG*NGSCFK Trigger: CTTAAAACAGCTACCATTCAAGCCAGCAATCTCATG...GATGGAACTGAAGGTCATTATCCTAAGCGAACTAATGCAGGAACAGAAAGCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000343597.4 ENST00000411426.1 ENST00000620384.1 |
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| 3UTR TCA 72 bp | TGTGTCCATGTGTACTCAATATTTAGCTTCCACTTATaGGAGAACATGTGGTACTTGGCTTTCTGTTCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: CVHVYSIFSFHL*ENMWYLAFCSC Trigger: GCAGGAACAGAAAGCCAAGTACCACATGTTCTCTCATAAGTGGAAGCTAAATATTGAGTACACATGGACACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000343597.4 ENST00000411426.1 ENST00000620384.1 |
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| 3UTR-3UTR CAA 90 bp | TTGGCTTTCTGTTCCTGCATTAGTTCGCTTAGGATAATGACCTTCAGTTCCATCTCTTTTGAAAAGTGTTaGTTCATGTCCTTTGCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: LAFCSCISSLRIMTFSSISFEKC*FMSFAH Trigger: GTGGGCAAAGGACATGAACAAACACTTTTCAAAAGA...GATGGAACTGAAGGTCATTATCCTAAGCGAACTAATGCAGGAACAGAAAGCCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000343597.4 ENST00000411426.1 ENST00000620384.1 |
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| 3UTR-3UTR CAA 90 bp | TTGGCTTTCTGTTCCTGCATTAGTTCGCTTAGGATAATGACCTTCAGTTCCATCCTTTGCCAGGAATTATaGGCATATTTTCTTGAAGAC | + |
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Preference number: 3 (lower is better) Translates to: LAFCSCISSLRIMTFSSILCQEL*AYFLED Trigger: GTCTTCAAGAAAATATGCCAATAATTCCTGGCAAAG...GATGGAACTGAAGGTCATTATCCTAAGCGAACTAATGCAGGAACAGAAAGCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000343597.4 ENST00000411426.1 ENST00000620384.1 |
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| 3UTR TCA 72 bp | CCTTTGGACATATACCCAGTCATGAGATTGCTGGCTTaGATGGTAGCTGTTTTAAGTTCTTTTAGAAATCAC | + |
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Preference number: 3 (lower is better) Translates to: PLDIYPVMRLLA*MVAVLSSFRNH Trigger: GTGATTTCTAAAAGAACTTAAAACAGCTACCATTCAAGCCAGCAATCTCATGACTGGGTATATGTCCAAAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000343597.4 ENST00000411426.1 ENST00000620384.1 |
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| CDS-3UTR GCA 90 bp | TTGGCTTTCTGTTCCTGCATTAGTTCGCTTAGGATAATGACCTTCAGTTCCATCTACCGCCTACCCAGATaGGGCCTCCGTCTAACTTGT | + |
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Preference number: 4 (lower is better) Translates to: LAFCSCISSLRIMTFSSIYRLPR*GLRLTC Trigger: ACAAGTTAGACGGAGGCCGCATCTGGGTAGGCGGTA...GATGGAACTGAAGGTCATTATCCTAAGCGAACTAATGCAGGAACAGAAAGCCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000343597.4 ENST00000411426.1 ENST00000620384.1 |
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| CDS-3UTR TCA 90 bp | TTGGCTTTCTGTTCCTGCATTAGTTCGCTTAGGATAATGACCTTCAGTTCCATCATTAGCACTCAGGGCTaGGTAGATACTCTCGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LAFCSCISSLRIMTFSSIISTQG*VDTLAG Trigger: CCCAGCGAGAGTATCTACTCAGCCCTGAGTGCTAAT...GATGGAACTGAAGGTCATTATCCTAAGCGAACTAATGCAGGAACAGAAAGCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000343597.4 ENST00000411426.1 ENST00000620384.1 |
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| CDS-3UTR TCA 90 bp | TTGGCTTTCTGTTCCTGCATTAGTTCGCTTAGGATAATGACCTTCAGTTCCATCAAACACTGGGGAGCCTaGGGACCCATCAGAGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: LAFCSCISSLRIMTFSSIKHWGA*GPIRET Trigger: TGTTTCTCTGATGGGTCCTCAGGCTCCCCAGTGTTT...GATGGAACTGAAGGTCATTATCCTAAGCGAACTAATGCAGGAACAGAAAGCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000343597.4 ENST00000411426.1 ENST00000620384.1 |
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| CDS-3UTR CCA 90 bp | TTGGCTTTCTGTTCCTGCATTAGTTCGCTTAGGATAATGACCTTCAGTTCCATCTGGAGTAACAGGGACTaGATTTCCCCAGAACCGGAG | + |
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Preference number: 4 (lower is better) Translates to: LAFCSCISSLRIMTFSSIWSNRD*ISPEPE Trigger: CTCCGGTTCTGGGGAAATCCAGTCCCTGTTACTCCA...GATGGAACTGAAGGTCATTATCCTAAGCGAACTAATGCAGGAACAGAAAGCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343597.4 |
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| CDS-3UTR TCA 90 bp | TTGGCTTTCTGTTCCTGCATTAGTTCGCTTAGGATAATGACCTTCAGTTCCATCCATGTGTCTGCTTCATaGCAGTATCAGAACCGGAGA | + |
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Preference number: 4 (lower is better) Translates to: LAFCSCISSLRIMTFSSIHVSAS*QYQNRR Trigger: TCTCCGGTTCTGATACTGTCATGAAGCAGACACATG...GATGGAACTGAAGGTCATTATCCTAAGCGAACTAATGCAGGAACAGAAAGCCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000411426.1 |
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| CDS-3UTR CCA 90 bp | TTGGCTTTCTGTTCCTGCATTAGTTCGCTTAGGATAATGACCTTCAGTTCCATCTCAGGTCTAGTCCTCTaGTCATCTTCCATAGCGCTA | + |
|
Preference number: 4 (lower is better) Translates to: LAFCSCISSLRIMTFSSISGLVL*SSSIAL Trigger: TAGCGCTATGGAAGATGACCAGAGGACTAGACCTGA...GATGGAACTGAAGGTCATTATCCTAAGCGAACTAATGCAGGAACAGAAAGCCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000343597.4 ENST00000620384.1 |
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| CDS-3UTR TCA 90 bp | TTGGCTTTCTGTTCCTGCATTAGTTCGCTTAGGATAATGACCTTCAGTTCCATCATGCCAGATAGACAATaGTCAACAGGTGTGTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LAFCSCISSLRIMTFSSIMPDRQ*STGVSA Trigger: TGCTGACACACCTGTTGATCATTGTCTATCTGGCAT...GATGGAACTGAAGGTCATTATCCTAAGCGAACTAATGCAGGAACAGAAAGCCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000343597.4 ENST00000411426.1 ENST00000620384.1 |
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| CDS-3UTR TCA 90 bp | TTGGCTTTCTGTTCCTGCATTAGTTCGCTTAGGATAATGACCTTCAGTTCCATCAAACCAGTAGATGGTTaGGGAGAAATCTGTCGCCAT | + |
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Preference number: 4 (lower is better) Translates to: LAFCSCISSLRIMTFSSIKPVDG*GEICRH Trigger: ATGGCGACAGATTTCTCCTCAACCATCTACTGGTTT...GATGGAACTGAAGGTCATTATCCTAAGCGAACTAATGCAGGAACAGAAAGCCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000343597.4 ENST00000411426.1 ENST00000620384.1 |
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| CDS-3UTR GCA 90 bp | TTGGCTTTCTGTTCCTGCATTAGTTCGCTTAGGATAATGACCTTCAGTTCCATCGCTGGGTTTACCATATaGTGTAAACACACTACGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LAFCSCISSLRIMTFSSIAGFTI*CKHTTV Trigger: GACCGTAGTGTGTTTACAGCATATGGTAAACCCAGC...GATGGAACTGAAGGTCATTATCCTAAGCGAACTAATGCAGGAACAGAAAGCCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000343597.4 ENST00000411426.1 ENST00000620384.1 |
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| CDS-3UTR GCA 90 bp | TTGGCTTTCTGTTCCTGCATTAGTTCGCTTAGGATAATGACCTTCAGTTCCATCAACCAATTTGCCAGATaGATTAAACACTGGGGAGCC | + |
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Preference number: 4 (lower is better) Translates to: LAFCSCISSLRIMTFSSINQFAR*IKHWGA Trigger: GGCTCCCCAGTGTTTAATGCATCTGGCAAATTGGTT...GATGGAACTGAAGGTCATTATCCTAAGCGAACTAATGCAGGAACAGAAAGCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000343597.4 ENST00000411426.1 ENST00000620384.1 |
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| CDS-3UTR GCA 90 bp | TTGGCTTTCTGTTCCTGCATTAGTTCGCTTAGGATAATGACCTTCAGTTCCATCCTCTGGATTTGCAGGTaGTGGAAAGACTGCTCTTTT | + |
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Preference number: 4 (lower is better) Translates to: LAFCSCISSLRIMTFSSILWICR*WKDCSF Trigger: AAAAGAGCAGTCTTTCCAGCACCTGCAAATCCAGAG...GATGGAACTGAAGGTCATTATCCTAAGCGAACTAATGCAGGAACAGAAAGCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000411426.1 |
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| CDS-3UTR TCA 90 bp | TTGGCTTTCTGTTCCTGCATTAGTTCGCTTAGGATAATGACCTTCAGTTCCATCCCACCTGAAATGTCTTaGATTTCTGGCCAAAATGGA | + |
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Preference number: 4 (lower is better) Translates to: LAFCSCISSLRIMTFSSIPPEMS*ISGQNG Trigger: TCCATTTTGGCCAGAAATTCAAGACATTTCAGGTGG...GATGGAACTGAAGGTCATTATCCTAAGCGAACTAATGCAGGAACAGAAAGCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343597.4 |
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| CDS-3UTR TCA 90 bp | TTGGCTTTCTGTTCCTGCATTAGTTCGCTTAGGATAATGACCTTCAGTTCCATCCATGACAGTATCCTTTaGAACTTCAGGTCTAGTCCT | + |
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Preference number: 4 (lower is better) Translates to: LAFCSCISSLRIMTFSSIHDSIL*NFRSSP Trigger: AGGACTAGACCTGAAGTTTCAAAGGATACTGTCATG...GATGGAACTGAAGGTCATTATCCTAAGCGAACTAATGCAGGAACAGAAAGCCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000343597.4 ENST00000620384.1 |
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| CDS-3UTR TCA 90 bp | TTGGCTTTCTGTTCCTGCATTAGTTCGCTTAGGATAATGACCTTCAGTTCCATCTTCGCAGGTTGCAACTaGAACAGAATTTGCAGTCAT | + |
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Preference number: 4 (lower is better) Translates to: LAFCSCISSLRIMTFSSIFAGCN*NRICSH Trigger: ATGACTGCAAATTCTGTTTCAGTTGCAACCTGCGAA...GATGGAACTGAAGGTCATTATCCTAAGCGAACTAATGCAGGAACAGAAAGCCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000343597.4 ENST00000411426.1 ENST00000620384.1 |
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| CDS-3UTR TCA 90 bp | TTGGCTTTCTGTTCCTGCATTAGTTCGCTTAGGATAATGACCTTCAGTTCCATCTATTGTCCCATTGCATaGACCCAACTGACTTGCTAT | + |
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Preference number: 4 (lower is better) Translates to: LAFCSCISSLRIMTFSSIYCPIA*TQLTCY Trigger: ATAGCAAGTCAGTTGGGTTCATGCAATGGGACAATA...GATGGAACTGAAGGTCATTATCCTAAGCGAACTAATGCAGGAACAGAAAGCCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000343597.4 ENST00000411426.1 ENST00000620384.1 |
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| CDS-3UTR GCA 90 bp | TTGGCTTTCTGTTCCTGCATTAGTTCGCTTAGGATAATGACCTTCAGTTCCATCGTGTCAGCATGTGTCTaGTTCATGACAGTATCCTTT | + |
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Preference number: 4 (lower is better) Translates to: LAFCSCISSLRIMTFSSIVSACV*FMTVSF Trigger: AAAGGATACTGTCATGAAGCAGACACATGCTGACAC...GATGGAACTGAAGGTCATTATCCTAAGCGAACTAATGCAGGAACAGAAAGCCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000343597.4 ENST00000620384.1 |
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| CDS-3UTR GCA 90 bp | TTGGCTTTCTGTTCCTGCATTAGTTCGCTTAGGATAATGACCTTCAGTTCCATCGGAGAATTTGCTCTCTaGTGTGTTCTACATCTTTGG | + |
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Preference number: 4 (lower is better) Translates to: LAFCSCISSLRIMTFSSIGEFAL*CVLHLW Trigger: CCAAAGATGTAGAACACAGCAGAGAGCAAATTCTCC...GATGGAACTGAAGGTCATTATCCTAAGCGAACTAATGCAGGAACAGAAAGCCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000343597.4 ENST00000411426.1 ENST00000620384.1 |
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| CDS-3UTR GCA 90 bp | TTGGCTTTCTGTTCCTGCATTAGTTCGCTTAGGATAATGACCTTCAGTTCCATCCCATTATTGTCCCATTaGATGAACCCAACTGACTTG | + |
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Preference number: 4 (lower is better) Translates to: LAFCSCISSLRIMTFSSIPLLSH*MNPTDL Trigger: CAAGTCAGTTGGGTTCATGCAATGGGACAATAATGG...GATGGAACTGAAGGTCATTATCCTAAGCGAACTAATGCAGGAACAGAAAGCCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000343597.4 ENST00000411426.1 ENST00000620384.1 |
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| CDS-3UTR GCA 90 bp | TTGGCTTTCTGTTCCTGCATTAGTTCGCTTAGGATAATGACCTTCAGTTCCATCCAGTTCCATCCATGTTaGTGCAAAGCACATGATCTT | + |
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Preference number: 4 (lower is better) Translates to: LAFCSCISSLRIMTFSSIQFHPC*CKAHDL Trigger: AAGATCATGTGCTTTGCAGCAACATGGATGGAACTG...GATGGAACTGAAGGTCATTATCCTAAGCGAACTAATGCAGGAACAGAAAGCCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000343597.4 ENST00000411426.1 ENST00000620384.1 |
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| CDS-3UTR GCA 90 bp | TTGGCTTTCTGTTCCTGCATTAGTTCGCTTAGGATAATGACCTTCAGTTCCATCGTGTCAGCATGTGTCTaGTTCATGACAGTATCAGAA | + |
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Preference number: 4 (lower is better) Translates to: LAFCSCISSLRIMTFSSIVSACV*FMTVSE Trigger: TTCTGATACTGTCATGAAGCAGACACATGCTGACAC...GATGGAACTGAAGGTCATTATCCTAAGCGAACTAATGCAGGAACAGAAAGCCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000411426.1 |
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| CDS-3UTR CCA 90 bp | TTGGCTTTCTGTTCCTGCATTAGTTCGCTTAGGATAATGACCTTCAGTTCCATCATCTGGCCACAAACTTaGATGTGTGTTTTTACCCAC | + |
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Preference number: 4 (lower is better) Translates to: LAFCSCISSLRIMTFSSIIWPQT*MCVFTH Trigger: GTGGGTAAAAACACACATCCAAGTTTGTGGCCAGAT...GATGGAACTGAAGGTCATTATCCTAAGCGAACTAATGCAGGAACAGAAAGCCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000343597.4 ENST00000411426.1 ENST00000620384.1 |
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| CDS-3UTR TCA 90 bp | TTGGCTTTCTGTTCCTGCATTAGTTCGCTTAGGATAATGACCTTCAGTTCCATCCATGTGTCTGCTTCATaGCAGTATCCTTTGAAACTT | + |
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Preference number: 4 (lower is better) Translates to: LAFCSCISSLRIMTFSSIHVSAS*QYPLKL Trigger: AAGTTTCAAAGGATACTGTCATGAAGCAGACACATG...GATGGAACTGAAGGTCATTATCCTAAGCGAACTAATGCAGGAACAGAAAGCCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000343597.4 ENST00000620384.1 |
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| CDS-3UTR TCA 90 bp | TTGGCTTTCTGTTCCTGCATTAGTTCGCTTAGGATAATGACCTTCAGTTCCATCAGAACTCTGTATAAGTaGAGGTTACCTTCGCACATT | + |
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Preference number: 4 (lower is better) Translates to: LAFCSCISSLRIMTFSSIRTLYK*RLPSHI Trigger: AATGTGCGAAGGTAACCTTCACTTATACAGAGTTCT...GATGGAACTGAAGGTCATTATCCTAAGCGAACTAATGCAGGAACAGAAAGCCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000343597.4 ENST00000411426.1 ENST00000620384.1 |
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| CDS-3UTR TCA 90 bp | TTGGCTTTCTGTTCCTGCATTAGTTCGCTTAGGATAATGACCTTCAGTTCCATCTTTAGCTTCCACTTATaGGAGAACATGTGGTACTTG | + |
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Preference number: 4 (lower is better) Translates to: LAFCSCISSLRIMTFSSIFSFHL*ENMWYL Trigger: CAAGTACCACATGTTCTCTCATAAGTGGAAGCTAAA...GATGGAACTGAAGGTCATTATCCTAAGCGAACTAATGCAGGAACAGAAAGCCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000343597.4 ENST00000411426.1 ENST00000620384.1 |
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| CDS-3UTR GCA 90 bp | TTGGCTTTCTGTTCCTGCATTAGTTCGCTTAGGATAATGACCTTCAGTTCCATCTTGGCTTTCTGTTCCTaGATTAGTTCGCTTAGGATA | + |
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Preference number: 4 (lower is better) Translates to: LAFCSCISSLRIMTFSSILAFCS*ISSLRI Trigger: TATCCTAAGCGAACTAATGCAGGAACAGAAAGCCAA...GATGGAACTGAAGGTCATTATCCTAAGCGAACTAATGCAGGAACAGAAAGCCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000343597.4 ENST00000411426.1 ENST00000620384.1 |
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| CDS-3UTR CCA 90 bp | TTGGCTTTCTGTTCCTGCATTAGTTCGCTTAGGATAATGACCTTCAGTTCCATCAATTTCTGGCCAAAATaGAGTAACAGGGACTGGATT | + |
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Preference number: 4 (lower is better) Translates to: LAFCSCISSLRIMTFSSINFWPK*SNRDWI Trigger: AATCCAGTCCCTGTTACTCCATTTTGGCCAGAAATT...GATGGAACTGAAGGTCATTATCCTAAGCGAACTAATGCAGGAACAGAAAGCCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343597.4 |
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| CDS-3UTR CCA 90 bp | TTGGCTTTCTGTTCCTGCATTAGTTCGCTTAGGATAATGACCTTCAGTTCCATCAGAACATGTGGTACTTaGCTTTCTGTTCCTGCATTA | + |
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Preference number: 4 (lower is better) Translates to: LAFCSCISSLRIMTFSSIRTCGT*LSVPAL Trigger: TAATGCAGGAACAGAAAGCCAAGTACCACATGTTCT...GATGGAACTGAAGGTCATTATCCTAAGCGAACTAATGCAGGAACAGAAAGCCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000343597.4 ENST00000411426.1 ENST00000620384.1 |
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| CDS-3UTR CCA 90 bp | TTGGCTTTCTGTTCCTGCATTAGTTCGCTTAGGATAATGACCTTCAGTTCCATCTGGATTTGCAGGTGCTaGAAAGACTGCTCTTTTATA | + |
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Preference number: 4 (lower is better) Translates to: LAFCSCISSLRIMTFSSIWICRC*KDCSFI Trigger: TATAAAAGAGCAGTCTTTCCAGCACCTGCAAATCCA...GATGGAACTGAAGGTCATTATCCTAAGCGAACTAATGCAGGAACAGAAAGCCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000411426.1 |
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| CDS-3UTR TCA 90 bp | TTGGCTTTCTGTTCCTGCATTAGTTCGCTTAGGATAATGACCTTCAGTTCCATCCCTATAGCAACAACATaGAAAAGAATGCATTCCATG | + |
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Preference number: 4 (lower is better) Translates to: LAFCSCISSLRIMTFSSIPIATT*KRMHSM Trigger: CATGGAATGCATTCTTTTTCATGTTGTTGCTATAGG...GATGGAACTGAAGGTCATTATCCTAAGCGAACTAATGCAGGAACAGAAAGCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000343597.4 ENST00000411426.1 ENST00000620384.1 |
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| CDS-3UTR TCA 90 bp | TTGGCTTTCTGTTCCTGCATTAGTTCGCTTAGGATAATGACCTTCAGTTCCATCCCTCCGTCTAACTTGTaGGTTTATTTGCCTATATTT | + |
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Preference number: 4 (lower is better) Translates to: LAFCSCISSLRIMTFSSIPPSNL*VYLPIF Trigger: AAATATAGGCAAATAAACTCACAAGTTAGACGGAGG...GATGGAACTGAAGGTCATTATCCTAAGCGAACTAATGCAGGAACAGAAAGCCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000343597.4 ENST00000411426.1 ENST00000620384.1 |
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| CDS-3UTR TCA 90 bp | TTGGCTTTCTGTTCCTGCATTAGTTCGCTTAGGATAATGACCTTCAGTTCCATCGAATTGCTTAGCTGGTaGAAGATTCATTCTCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LAFCSCISSLRIMTFSSIELLSW*KIHSLL Trigger: CAAAAGAGAATGAATCTTTCACCAGCTAAGCAATTC...GATGGAACTGAAGGTCATTATCCTAAGCGAACTAATGCAGGAACAGAAAGCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000343597.4 ENST00000411426.1 ENST00000620384.1 |
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| CDS-3UTR TCA 90 bp | TTGGCTTTCTGTTCCTGCATTAGTTCGCTTAGGATAATGACCTTCAGTTCCATCTCTACCAACCCATCTTaGCAATCGTTTGGATATTTT | + |
|
Preference number: 4 (lower is better) Translates to: LAFCSCISSLRIMTFSSISTNPS*QSFGYF Trigger: AAAATATCCAAACGATTGTCAAGATGGGTTGGTAGA...GATGGAACTGAAGGTCATTATCCTAAGCGAACTAATGCAGGAACAGAAAGCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000343597.4 ENST00000411426.1 ENST00000620384.1 |
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| CDS-3UTR GCA 90 bp | TTGGCTTTCTGTTCCTGCATTAGTTCGCTTAGGATAATGACCTTCAGTTCCATCTCAAGGGCTGTTTCATaGTTGTTGACTTCACTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: LAFCSCISSLRIMTFSSISRAVS*LLTSLL Trigger: TAAAAGTGAAGTCAACAAGCATGAAACAGCCCTTGA...GATGGAACTGAAGGTCATTATCCTAAGCGAACTAATGCAGGAACAGAAAGCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000343597.4 ENST00000411426.1 ENST00000620384.1 |
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| CDS-3UTR GCA 90 bp | TTGGCTTTCTGTTCCTGCATTAGTTCGCTTAGGATAATGACCTTCAGTTCCATCTGTGTCCATCTTCTTTaGTACTCTTTCTTTGACCAA | + |
|
Preference number: 4 (lower is better) Translates to: LAFCSCISSLRIMTFSSICVHLL*YSFFDQ Trigger: TTGGTCAAAGAAAGAGTAGCAAAGAAGATGGACACA...GATGGAACTGAAGGTCATTATCCTAAGCGAACTAATGCAGGAACAGAAAGCCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000343597.4 ENST00000411426.1 ENST00000620384.1 |
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| CDS-3UTR CCA 90 bp | TTGGCTTTCTGTTCCTGCATTAGTTCGCTTAGGATAATGACCTTCAGTTCCATCAATGTCTTGAATTTCTaGCCAAAATGGAGTAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: LAFCSCISSLRIMTFSSINVLNF*PKWSNR Trigger: CCTGTTACTCCATTTTGGCCAGAAATTCAAGACATT...GATGGAACTGAAGGTCATTATCCTAAGCGAACTAATGCAGGAACAGAAAGCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343597.4 |
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| CDS-3UTR GCA 90 bp | TTGGCTTTCTGTTCCTGCATTAGTTCGCTTAGGATAATGACCTTCAGTTCCATCGGATTGAATTTATTCTaGCACCTGAAATGTCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LAFCSCISSLRIMTFSSIGLNLF*HLKCLE Trigger: TTCAAGACATTTCAGGTGGCAGAATAAATTCAATCC...GATGGAACTGAAGGTCATTATCCTAAGCGAACTAATGCAGGAACAGAAAGCCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343597.4 |
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| CDS-3UTR GCA 90 bp | TTGGCTTTCTGTTCCTGCATTAGTTCGCTTAGGATAATGACCTTCAGTTCCATCTGCTACACTTTCTTATaGCAGATAGACAATGATCAA | + |
|
Preference number: 4 (lower is better) Translates to: LAFCSCISSLRIMTFSSICYTFL*QIDNDQ Trigger: TTGATCATTGTCTATCTGGCATAAGAAAGTGTAGCA...GATGGAACTGAAGGTCATTATCCTAAGCGAACTAATGCAGGAACAGAAAGCCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000343597.4 ENST00000411426.1 ENST00000620384.1 |
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| CDS-3UTR GCA 90 bp | TTGGCTTTCTGTTCCTGCATTAGTTCGCTTAGGATAATGACCTTCAGTTCCATCACTTGTGAGTTTATTTaGCTATATTTTCGGGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LAFCSCISSLRIMTFSSITCEFI*LYFRGK Trigger: TTTGCCCCGAAAATATAGGCAAATAAACTCACAAGT...GATGGAACTGAAGGTCATTATCCTAAGCGAACTAATGCAGGAACAGAAAGCCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000343597.4 ENST00000411426.1 ENST00000620384.1 |
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| CDS-3UTR CCA 90 bp | TTGGCTTTCTGTTCCTGCATTAGTTCGCTTAGGATAATGACCTTCAGTTCCATCTTTGGATTTTCACATTaGCGTAATATGTGTCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LAFCSCISSLRIMTFSSIFGFSH*RNMCPS Trigger: AGATGGACACATATTACGCCAATGTGAAAATCCAAA...GATGGAACTGAAGGTCATTATCCTAAGCGAACTAATGCAGGAACAGAAAGCCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000343597.4 ENST00000411426.1 ENST00000620384.1 |
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| CDS-3UTR CCA 90 bp | TTGGCTTTCTGTTCCTGCATTAGTTCGCTTAGGATAATGACCTTCAGTTCCATCATCCTGGGAATTGTCTaGCGAGTTTTATCTTTAATA | + |
|
Preference number: 4 (lower is better) Translates to: LAFCSCISSLRIMTFSSIILGIV*RVLSLI Trigger: TATTAAAGATAAAACTCGCCAGACAATTCCCAGGAT...GATGGAACTGAAGGTCATTATCCTAAGCGAACTAATGCAGGAACAGAAAGCCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000343597.4 ENST00000411426.1 ENST00000620384.1 |
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| CDS-3UTR CCA 90 bp | TTGGCTTTCTGTTCCTGCATTAGTTCGCTTAGGATAATGACCTTCAGTTCCATCTTAATTGCCTCCTTTTaGACATCCAGATTAATAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LAFCSCISSLRIMTFSSILIASF*TSRLIA Trigger: TGCTATTAATCTGGATGTCCAAAAGGAGGCAATTAA...GATGGAACTGAAGGTCATTATCCTAAGCGAACTAATGCAGGAACAGAAAGCCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000343597.4 ENST00000411426.1 ENST00000620384.1 |
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| CDS-3UTR CCA 90 bp | TTGGCTTTCTGTTCCTGCATTAGTTCGCTTAGGATAATGACCTTCAGTTCCATCGATACTGATGCATTATaGCTTCATTCAACGTTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LAFCSCISSLRIMTFSSIDTDAL*LHSTFD Trigger: ATCAAACGTTGAATGAAGCCATAATGCATCAGTATC...GATGGAACTGAAGGTCATTATCCTAAGCGAACTAATGCAGGAACAGAAAGCCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000343597.4 ENST00000411426.1 ENST00000620384.1 |
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| CDS-3UTR CCA 90 bp | TTGGCTTTCTGTTCCTGCATTAGTTCGCTTAGGATAATGACCTTCAGTTCCATCAGTATACATTACTGGTaGTATCATAGAGATCTACCA | + |
|
Preference number: 4 (lower is better) Translates to: LAFCSCISSLRIMTFSSISIHYW*YHRDLP Trigger: TGGTAGATCTCTATGATACCACCAGTAATGTATACT...GATGGAACTGAAGGTCATTATCCTAAGCGAACTAATGCAGGAACAGAAAGCCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000343597.4 ENST00000411426.1 ENST00000620384.1 |
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| 3UTR CAA 72 bp | TTTTGTTATATAGGTAAACTGCATGTCACCAGGGTTTaGTGTTCAGATTATTTCATCACCCAGGTAATAAGC | + |
|
Preference number: 4 (lower is better) Translates to: FCYIGKLHVTRV*CSDYFITQVIS Trigger: GCTTATTACCTGGGTGATGAAATAATCTGAACACAAAACCCTGGTGACATGCAGTTTACCTATATAACAAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000343597.4 ENST00000411426.1 ENST00000620384.1 |
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| CDS GCA 90 bp | GCCTCCTTTTGGACATCCAGATTAATAGCATACCGCCTACCCAGATaGGGCCTCCGTCTAACTTGTGAGTTTATTTGCCTATATTTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: ASFWTSRLIAYRLPR*GLRLTCEFICLYFR Trigger: CCGAAAATATAGGCAAATAAACTCACAAGTTAGACGGAGGCCGCATCTGGGTAGGCGGTATGCTATTAATCTGGATGTCCAAAAGGAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000343597.4 ENST00000411426.1 ENST00000529618.5 ENST00000620384.1 |
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| CDS-3UTR CAA 90 bp | TTGGCTTTCTGTTCCTGCATTAGTTCGCTTAGGATAATGACCTTCAGTTCCATCCGAAAACGGCCATCCTaGCATAAGGCTCCTTCAATA | + |
|
Preference number: 5 (lower is better) Translates to: LAFCSCISSLRIMTFSSIRKRPS*HKAPSI Trigger: TATTGAAGGAGCCTTATGCAAGGATGGCCGTTTTCG...GATGGAACTGAAGGTCATTATCCTAAGCGAACTAATGCAGGAACAGAAAGCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000343597.4 ENST00000411426.1 ENST00000620384.1 |
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| CDS-3UTR CAA 90 bp | TTGGCTTTCTGTTCCTGCATTAGTTCGCTTAGGATAATGACCTTCAGTTCCATCTCACTAGGCAGGCACTaGAGAGGCATTCCTAAATTT | + |
|
Preference number: 5 (lower is better) Translates to: LAFCSCISSLRIMTFSSISLGRH*RGIPKF Trigger: AAATTTAGGAATGCCTCTCAAGTGCCTGCCTAGTGA...GATGGAACTGAAGGTCATTATCCTAAGCGAACTAATGCAGGAACAGAAAGCCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000343597.4 ENST00000411426.1 ENST00000620384.1 |
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| CDS-3UTR CAA 90 bp | TTGGCTTTCTGTTCCTGCATTAGTTCGCTTAGGATAATGACCTTCAGTTCCATCCCTGTGTTTCCATTATaGTCCCATTGCATGAACCCA | + |
|
Preference number: 5 (lower is better) Translates to: LAFCSCISSLRIMTFSSIPVFPL*SHCMNP Trigger: TGGGTTCATGCAATGGGACAATAATGGAAACACAGG...GATGGAACTGAAGGTCATTATCCTAAGCGAACTAATGCAGGAACAGAAAGCCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000343597.4 ENST00000411426.1 ENST00000620384.1 |
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| CDS-3UTR CAA 90 bp | TTGGCTTTCTGTTCCTGCATTAGTTCGCTTAGGATAATGACCTTCAGTTCCATCTCAATGGAAAACCAATaGTCAGGAGTAGGGCAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: LAFCSCISSLRIMTFSSISMENQ*SGVGQN Trigger: GTTCTGCCCTACTCCTGACAATTGGTTTTCCATTGA...GATGGAACTGAAGGTCATTATCCTAAGCGAACTAATGCAGGAACAGAAAGCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000343597.4 ENST00000411426.1 ENST00000620384.1 |
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| CDS TCA 90 bp | GATGGAGAAACAAGGATTGAATTTATTCTGCCACCTGAAATGTCTTaGATTTCTGGCCAAAATGGAGTAACAGGGACTGGATTTCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: DGETRIEFILPPEMS*ISGQNGVTGTGFPQ Trigger: CTGGGGAAATCCAGTCCCTGTTACTCCATTTTGGCCAGAAATTCAAGACATTTCAGGTGGCAGAATAAATTCAATCCTTGTTTCTCCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000343597.4 ENST00000528234.5 |
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| CDS-3UTR CAA 90 bp | TTGGCTTTCTGTTCCTGCATTAGTTCGCTTAGGATAATGACCTTCAGTTCCATCGTTACCTTCGCACATTaGCTAATTATATCTGGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LAFCSCISSLRIMTFSSIVTFAH*LIISGH Trigger: GTGGCCAGATATAATTAGCAAATGTGCGAAGGTAAC...GATGGAACTGAAGGTCATTATCCTAAGCGAACTAATGCAGGAACAGAAAGCCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000343597.4 ENST00000411426.1 ENST00000620384.1 |
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| CDS TCA 90 bp | CTGATTCTTTATCCTTTCACTGAAATAGTCATTAGCACTCAGGGCTaGGTAGATACTCTCGCTGGGTTTACCATATGCTGTAAACACACT | + |
|
Preference number: 5 (lower is better) Translates to: LILYPFTEIVISTQG*VDTLAGFTICCKHT Trigger: AGTGTGTTTACAGCATATGGTAAACCCAGCGAGAGTATCTACTCAGCCCTGAGTGCTAATGACTATTTCAGTGAAAGGATAAAGAATCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000343597.4 ENST00000411426.1 ENST00000529618.5 ENST00000534403.5 ENST00000620384.1 |
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| CDS-3UTR CAA 90 bp | TTGGCTTTCTGTTCCTGCATTAGTTCGCTTAGGATAATGACCTTCAGTTCCATCATGGAGAAACAAGGATaGAATTTATTCTGCCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: LAFCSCISSLRIMTFSSIMEKQG*NLFCHL Trigger: CAGGTGGCAGAATAAATTCAATCCTTGTTTCTCCAT...GATGGAACTGAAGGTCATTATCCTAAGCGAACTAATGCAGGAACAGAAAGCCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000343597.4 ENST00000620384.1 |
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| CDS CCA 90 bp | GAAGGTTACCTTCGCACATTTGCTAATTATATCTGGCCACAAACTTaGATGTGTGTTTTTACCCACCATAAGATGTACAACATGTCGACA | + |
|
Preference number: 5 (lower is better) Translates to: EGYLRTFANYIWPQT*MCVFTHHKMYNMST Trigger: TGTCGACATGTTGTACATCTTATGGTGGGTAAAAACACACATCCAAGTTTGTGGCCAGATATAATTAGCAAATGTGCGAAGGTAACCTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000343597.4 ENST00000411426.1 ENST00000529618.5 ENST00000620384.1 |
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| CDS-3UTR CAA 90 bp | TTGGCTTTCTGTTCCTGCATTAGTTCGCTTAGGATAATGACCTTCAGTTCCATCATTAATTGCCTCCTTTaGGACATCCAGATTAATAGC | + |
|
Preference number: 5 (lower is better) Translates to: LAFCSCISSLRIMTFSSIINCLL*DIQINS Trigger: GCTATTAATCTGGATGTCCAAAAGGAGGCAATTAAT...GATGGAACTGAAGGTCATTATCCTAAGCGAACTAATGCAGGAACAGAAAGCCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000343597.4 ENST00000411426.1 ENST00000620384.1 |
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| CDS-3UTR CAA 90 bp | TTGGCTTTCTGTTCCTGCATTAGTTCGCTTAGGATAATGACCTTCAGTTCCATCATCTACCAACCCATCTaGACAATCGTTTGGATATTT | + |
|
Preference number: 5 (lower is better) Translates to: LAFCSCISSLRIMTFSSIIYQPI*TIVWIF Trigger: AAATATCCAAACGATTGTCAAGATGGGTTGGTAGAT...GATGGAACTGAAGGTCATTATCCTAAGCGAACTAATGCAGGAACAGAAAGCCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000343597.4 ENST00000411426.1 ENST00000620384.1 |
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| CDS GCA 90 bp | TCTTTATTGTTCAAATTTGGATTCTGCATTTCAAGGGCTGTTTCATaGTTGTTGACTTCACTTTTAAGCTTAAAGGTGCTGCTACACTTT | + |
|
Preference number: 5 (lower is better) Translates to: SLLFKFGFCISRAVS*LLTSLLSLKVLLHF Trigger: AAAGTGTAGCAGCACCTTTAAGCTTAAAAGTGAAGTCAACAAGCATGAAACAGCCCTTGAAATGCAGAATCCAAATTTGAACAATAAAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000343597.4 ENST00000411426.1 ENST00000529618.5 ENST00000534403.5 ENST00000620384.1 |
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| CDS CCA 72 bp | GTCTTGAATTTCTGGCCAAAATGGAGTAACAGGGACTaGATTTCCCCAGAACCGGAGAGTCTGTCCACACGG | + |
|
Preference number: 6 (lower is better) Translates to: VLNFWPKWSNRD*ISPEPESLSTR Trigger: CCGTGTGGACAGACTCTCCGGTTCTGGGGAAATCCAGTCCCTGTTACTCCATTTTGGCCAGAAATTCAAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000343597.4 ENST00000528234.5 |
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| CDS CCA 72 bp | TCCTTGAATTTCTGGCCAAAATGGAGTAACAGGGACTaGATTTCCCCAGAACCGGAGAGTCTGTCCACACGG | + |
|
Preference number: 6 (lower is better) Translates to: SLNFWPKWSNRD*ISPEPESLSTR Trigger: CCGTGTGGACAGACTCTCCGGTTCTGGGGAAATCCAGTCCCTGTTACTCCATTTTGGCCAGAAATTCAAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000529618.5 |
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| CDS TCA 72 bp | ATACCGCCTACCCAGATGCGGCCTCCGTCTAACTTGTaGGTTTATTTGCCTATATTTTCGGGGCAAACTACA | + |
|
Preference number: 6 (lower is better) Translates to: IPPTQMRPPSNL*VYLPIFSGQTT Trigger: TGTAGTTTGCCCCGAAAATATAGGCAAATAAACTCACAAGTTAGACGGAGGCCGCATCTGGGTAGGCGGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000343597.4 ENST00000411426.1 ENST00000529618.5 ENST00000620384.1 |
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| CDS GCA 72 bp | TGGACATCCAGATTAATAGCATACCGCCTACCCAGATaGGGCCTCCGTCTAACTTGTGAGTTTATTTGCCTA | + |
|
Preference number: 6 (lower is better) Translates to: WTSRLIAYRLPR*GLRLTCEFICL Trigger: TAGGCAAATAAACTCACAAGTTAGACGGAGGCCGCATCTGGGTAGGCGGTATGCTATTAATCTGGATGTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000343597.4 ENST00000411426.1 ENST00000529618.5 ENST00000620384.1 |
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| CDS TCA 72 bp | AAGGTGCTGCTACACTTTCTTATGCCAGATAGACAATaGTCAACAGGTGTGTCAGCATGTGTCTGCTTCATG | + |
|
Preference number: 6 (lower is better) Translates to: KVLLHFLMPDRQ*STGVSACVCFM Trigger: CATGAAGCAGACACATGCTGACACACCTGTTGATCATTGTCTATCTGGCATAAGAAAGTGTAGCAGCACCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000343597.4 ENST00000411426.1 ENST00000529618.5 ENST00000534403.5 ENST00000620384.1 |
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| CDS TCA 72 bp | TGTGTTTCCATTATTGTCCCATTGCATGAACCCAACTaGCTTGCTATAATATGTAAGCTGTTCGCAGGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: CVSIIVPLHEPN*LAIICKLFAGC Trigger: GCAACCTGCGAACAGCTTACATATTATAGCAAGTCAGTTGGGTTCATGCAATGGGACAATAATGGAAACACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000343597.4 ENST00000411426.1 ENST00000529618.5 ENST00000620384.1 |
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| CDS GCA 72 bp | CTCGATAAGATGGAGAAACAAGGATTGAATTTATTCTaGCACCTGAAATGTCTTGAATTTCTGGCCAAAATG | + |
|
Preference number: 6 (lower is better) Translates to: LDKMEKQGLNLF*HLKCLEFLAKM Trigger: CATTTTGGCCAGAAATTCAAGACATTTCAGGTGGCAGAATAAATTCAATCCTTGTTTCTCCATCTTATCGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000343597.4 ENST00000528234.5 |
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