Pregenerated sensors for FAM111A-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000245571Ensembl transcript IDs: ENST00000501817.6, ENST00000531708.1, ENST00000532845.2, ENST00000533220.1, ENST00000658798.1
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GACACAGTGAGACTCTGTCTCCAACTAGCCTCAGCGCCTCCTGTGTaGTGCAGCAGATGGCGCGCTGCAGACCCCAGCCTGGTGCCTCCG | + |
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Preference number: 5 (lower is better) Translates to: DTVRLCLQLASAPPV*CSRWRAADPSLVPP Trigger: CGGAGGCACCAGGCTGGGGTCTGCAGCGCGCCATCTGCTGCAGCACACAGGAGGCGCTGAGGCTAGTTGGAGACAGAGTCTCACTGTGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000501817.6 ENST00000532845.2 ENST00000658798.1 |
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| CDS GCA 90 bp | TGGCAGCGCGCGGCACTCCCCAGCCCGGTTAGGAAGAAACGGCTTTaGTGGGTGAGATTTAGGGGCTGCTCTCGCGTCTCGTCTCGGGAG | + |
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Preference number: 5 (lower is better) Translates to: WQRAALPSPVRKKRL*WVRFRGCSRVSSRE Trigger: CTCCCGAGACGAGACGCGAGAGCAGCCCCTAAATCTCACCCAGCAAAGCCGTTTCTTCCTAACCGGGCTGGGGAGTGCCGCGCGCTGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000501817.6 ENST00000531708.1 ENST00000532845.2 ENST00000658798.1 |
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| CDS CCA 90 bp | CAGCGCGCGGCACTCCCCAGCCCGGTTAGGAAGAAACGGCTTTGCTaGGTGAGATTTAGGGGCTGCTCTCGCGTCTCGTCTCGGGAGCTG | + |
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Preference number: 5 (lower is better) Translates to: QRAALPSPVRKKRLC*VRFRGCSRVSSREL Trigger: CAGCTCCCGAGACGAGACGCGAGAGCAGCCCCTAAATCTCACCCAGCAAAGCCGTTTCTTCCTAACCGGGCTGGGGAGTGCCGCGCGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000501817.6 ENST00000531708.1 ENST00000532845.2 ENST00000658798.1 |
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| CDS TCA 90 bp | GCGCGGCACTCCCCAGCCCGGTTAGGAAGAAACGGCTTTGCTGGGTaGGATTTAGGGGCTGCTCTCGCGTCTCGTCTCGGGAGCTGTCCT | + |
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Preference number: 5 (lower is better) Translates to: ARHSPARLGRNGFAG*DLGAALASRLGSCP Trigger: AGGACAGCTCCCGAGACGAGACGCGAGAGCAGCCCCTAAATCTCACCCAGCAAAGCCGTTTCTTCCTAACCGGGCTGGGGAGTGCCGCGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000501817.6 ENST00000531708.1 ENST00000532845.2 ENST00000658798.1 |
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| CDS TCA 90 bp | GTGAGGGCTGGGCAAACCATTTCCACGTCCTGCTGCCACTGGGCATaGGGGATGTGGGTTCTCACCTCAGCTCCGCCCTCCCCTTACCCG | + |
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Preference number: 5 (lower is better) Translates to: VRAGQTISTSCCHWA*GMWVLTSAPPSPYP Trigger: CGGGTAAGGGGAGGGCGGAGCTGAGGTGAGAACCCACATCCCTCATGCCCAGTGGCAGCAGGACGTGGAAATGGTTTGCCCAGCCCTCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000532845.2 |
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| CDS CCA 90 bp | CTCGCGTCTCGTCTCGGGAGCTGTCCTGAAAGGGGGCTGCCACGCTaGTCTCATTCTGTAGAGCTGCAAATTAAGGAGCACTGCGGGTGC | + |
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Preference number: 5 (lower is better) Translates to: LASRLGSCPERGLPR*SHSVELQIKEHCGC Trigger: GCACCCGCAGTGCTCCTTAATTTGCAGCTCTACAGAATGAGACCAGCGTGGCAGCCCCCTTTCAGGACAGCTCCCGAGACGAGACGCGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000501817.6 ENST00000531708.1 ENST00000532845.2 ENST00000658798.1 |
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| CDS TCA 90 bp | GTGAGATTTAGGGGCTGCTCTCGCGTCTCGTCTCGGGAGCTGTCCTaGAAGGGGGCTGCCACGCTGGTCTCATTCTGTAGAGCTGCAAAT | + |
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Preference number: 5 (lower is better) Translates to: VRFRGCSRVSSRELS*KGAATLVSFCRAAN Trigger: ATTTGCAGCTCTACAGAATGAGACCAGCGTGGCAGCCCCCTTTCAGGACAGCTCCCGAGACGAGACGCGAGAGCAGCCCCTAAATCTCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000501817.6 ENST00000531708.1 ENST00000532845.2 ENST00000658798.1 |
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| CDS CCA 90 bp | ACTAGGATGCTTTCGCTTTCGCTCTCGCTTTCCAATACTCGGGACTaGGGAAACCGGGAGAATAGAAGCAGGCAAGGACCGCCGTGGGCA | + |
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Preference number: 5 (lower is better) Translates to: TRMLSLSLSLSNTRD*GNRENRSRQGPPWA Trigger: TGCCCACGGCGGTCCTTGCCTGCTTCTATTCTCCCGGTTTCCCCAGTCCCGAGTATTGGAAAGCGAGAGCGAAAGCGAAAGCATCCTAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531708.1 |
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| CDS CCA 90 bp | GCAGTTTCCCAGAAGGCTCAAGCTCTGTCCAAGAGAAGTGAGGGCTaGGCAAACCATTTCCACGTCCTGCTGCCACTGGGCATGAGGGAT | + |
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Preference number: 5 (lower is better) Translates to: AVSQKAQALSKRSEG*ANHFHVLLPLGMRD Trigger: ATCCCTCATGCCCAGTGGCAGCAGGACGTGGAAATGGTTTGCCCAGCCCTCACTTCTCTTGGACAGAGCTTGAGCCTTCTGGGAAACTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000532845.2 |
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| CDS TCA 90 bp | GGCCCTGCAGGTTGGGCTTCTCCAGCACTTTCTGTCTTTGCTGCATaGTCCTCATGGACTGCATCCAACCTTGTAAAGTCAGCCAAGAAG | + |
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Preference number: 5 (lower is better) Translates to: GPAGWASPALSVFAA*SSWTASNLVKSAKK Trigger: CTTCTTGGCTGACTTTACAAGGTTGGATGCAGTCCATGAGGATCATGCAGCAAAGACAGAAAGTGCTGGAGAAGCCCAACCTGCAGGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000501817.6 ENST00000532845.2 ENST00000658798.1 |
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| CDS GCA 90 bp | GTGAGGCCCTGCAGGTTGGGCTTCTCCAGCACTTTCTGTCTTTGCTaGATGATCCTCATGGACTGCATCCAACCTTGTAAAGTCAGCCAA | + |
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Preference number: 5 (lower is better) Translates to: VRPCRLGFSSTFCLC*MILMDCIQPCKVSQ Trigger: TTGGCTGACTTTACAAGGTTGGATGCAGTCCATGAGGATCATGCAGCAAAGACAGAAAGTGCTGGAGAAGCCCAACCTGCAGGGCCTCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000501817.6 ENST00000532845.2 ENST00000658798.1 |
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| CDS GCA 90 bp | AAGGTGAGGCCCTGCAGGTTGGGCTTCTCCAGCACTTTCTGTCTTTaGTGCATGATCCTCATGGACTGCATCCAACCTTGTAAAGTCAGC | + |
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Preference number: 5 (lower is better) Translates to: KVRPCRLGFSSTFCL*CMILMDCIQPCKVS Trigger: GCTGACTTTACAAGGTTGGATGCAGTCCATGAGGATCATGCAGCAAAGACAGAAAGTGCTGGAGAAGCCCAACCTGCAGGGCCTCACCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000501817.6 ENST00000532845.2 ENST00000658798.1 |
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| CDS GCA 90 bp | AGCTACATGAAGTGGAACCACACAAACCAGCTAAAGGTGAGGCCCTaGAGGTTGGGCTTCTCCAGCACTTTCTGTCTTTGCTGCATGATC | + |
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Preference number: 5 (lower is better) Translates to: SYMKWNHTNQLKVRP*RLGFSSTFCLCCMI Trigger: GATCATGCAGCAAAGACAGAAAGTGCTGGAGAAGCCCAACCTGCAGGGCCTCACCTTTAGCTGGTTTGTGTGGTTCCACTTCATGTAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000501817.6 ENST00000532845.2 ENST00000658798.1 |
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| CDS CCA 90 bp | CTTACCTGCCGTATGACTTCTGCCTCCATCCCTCTGAACCAAAGATaGGCCTCACAAGATGGACCAGAAACACAGTGGTTCCAAGTGGTT | + |
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Preference number: 5 (lower is better) Translates to: LTCRMTSASIPLNQR*ASQDGPETQWFQVV Trigger: AACCACTTGGAACCACTGTGTTTCTGGTCCATCTTGTGAGGCCCATCTTTGGTTCAGAGGGATGGAGGCAGAAGTCATACGGCAGGTAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000501817.6 ENST00000532845.2 ENST00000658798.1 |
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| CDS CCA 90 bp | ACTCACAGTGAACTCTGGCTAATGATTCTGGACAGTCCAATCCTGTaGTTCAACTACTTCAATGGCCAGCCAAGGGAAAAGGGACTGAGT | + |
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Preference number: 5 (lower is better) Translates to: THSELWLMILDSPIL*FNYFNGQPREKGLS Trigger: ACTCAGTCCCTTTTCCCTTGGCTGGCCATTGAAGTAGTTGAACCACAGGATTGGACTGTCCAGAATCATTAGCCAGAGTTCACTGTGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000501817.6 ENST00000531708.1 ENST00000532845.2 ENST00000658798.1 |
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| CDS TCA 90 bp | TTTAAACAGCATGCAAATAAAGCCTGCTCTTCATGGCCCCAGTTCTaGAAGCCCTGTCATGTATCACTGCTTGAGCTTACCTGCCGTATG | + |
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Preference number: 5 (lower is better) Translates to: FKQHANKACSSWPQF*KPCHVSLLELTCRM Trigger: CATACGGCAGGTAAGCTCAAGCAGTGATACATGACAGGGCTTTCAGAACTGGGGCCATGAAGAGCAGGCTTTATTTGCATGCTGTTTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000501817.6 ENST00000532845.2 ENST00000658798.1 |
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| CDS GCA 90 bp | GGCTTCTCCAGCACTTTCTGTCTTTGCTGCATGATCCTCATGGACTaGATCCAACCTTGTAAAGTCAGCCAAGAAGAGAAAAATCAGAGG | + |
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Preference number: 5 (lower is better) Translates to: GFSSTFCLCCMILMD*IQPCKVSQEEKNQR Trigger: CCTCTGATTTTTCTCTTCTTGGCTGACTTTACAAGGTTGGATGCAGTCCATGAGGATCATGCAGCAAAGACAGAAAGTGCTGGAGAAGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000501817.6 ENST00000532845.2 ENST00000658798.1 |
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| CDS CCA 90 bp | GACTTCTGCCTCCATCCCTCTGAACCAAAGATGGGCCTCACAAGATaGACCAGAAACACAGTGGTTCCAAGTGGTTATAGTAAGATTCAT | + |
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Preference number: 5 (lower is better) Translates to: DFCLHPSEPKMGLTR*TRNTVVPSGYSKIH Trigger: ATGAATCTTACTATAACCACTTGGAACCACTGTGTTTCTGGTCCATCTTGTGAGGCCCATCTTTGGTTCAGAGGGATGGAGGCAGAAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000501817.6 ENST00000532845.2 ENST00000658798.1 |
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| CDS CCA 90 bp | CCTCTGAACCAAAGATGGGCCTCACAAGATGGACCAGAAACACAGTaGTTCCAAGTGGTTATAGTAAGATTCATTTGCCACCTAAATTTT | + |
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Preference number: 5 (lower is better) Translates to: PLNQRWASQDGPETQ*FQVVIVRFICHLNF Trigger: AAAATTTAGGTGGCAAATGAATCTTACTATAACCACTTGGAACCACTGTGTTTCTGGTCCATCTTGTGAGGCCCATCTTTGGTTCAGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000501817.6 ENST00000532845.2 ENST00000658798.1 |
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| CDS GCA 90 bp | TATATCTCTGGACATTTTCATAAAACCATGGGTCCTCTTATTAAATaGTGGAACCCAGTACTCCTCCTGCTACAACCACACACACTAAAG | + |
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Preference number: 5 (lower is better) Translates to: YISGHFHKTMGPLIK*WNPVLLLLQPHTLK Trigger: CTTTAGTGTGTGTGGTTGTAGCAGGAGGAGTACTGGGTTCCAGCATTTAATAAGAGGACCCATGGTTTTATGAAAATGTCCAGAGATATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000501817.6 ENST00000532845.2 ENST00000658798.1 |
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| CDS CCA 90 bp | ATCTCTGGACATTTTCATAAAACCATGGGTCCTCTTATTAAATGCTaGAACCCAGTACTCCTCCTGCTACAACCACACACACTAAAGATT | + |
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Preference number: 5 (lower is better) Translates to: ISGHFHKTMGPLIKC*NPVLLLLQPHTLKI Trigger: AATCTTTAGTGTGTGTGGTTGTAGCAGGAGGAGTACTGGGTTCCAGCATTTAATAAGAGGACCCATGGTTTTATGAAAATGTCCAGAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000501817.6 ENST00000532845.2 ENST00000658798.1 |
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| CDS TCA 90 bp | TATTTGCCTATAAGCCCATTCAAGGGCTTACAGTGCTCATGGAAGTaGTCACCCTTCTTTCTTCATTTCTACCTGAATAGTAGAGCATTA | + |
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Preference number: 5 (lower is better) Translates to: YLPISPFKGLQCSWK*SPFFLHFYLNSRAL Trigger: TAATGCTCTACTATTCAGGTAGAAATGAAGAAAGAAGGGTGATCACTTCCATGAGCACTGTAAGCCCTTGAATGGGCTTATAGGCAAATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000532845.2 ENST00000658798.1 |
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| CDS CCA 90 bp | GTAAAAATTATCACTGGAATGTTCAGGAACTGGGCACATAGACCCTaGAATTTTGCAACAGCAAACACATCTGAATTTGGAATCTATATC | + |
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Preference number: 5 (lower is better) Translates to: VKIITGMFRNWAHRP*NFATANTSEFGIYI Trigger: GATATAGATTCCAAATTCAGATGTGTTTGCTGTTGCAAAATTCCAGGGTCTATGTGCCCAGTTCCTGAACATTCCAGTGATAATTTTTAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000501817.6 ENST00000532845.2 ENST00000658798.1 |
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| CDS TCA 72 bp | AGAAGCAGGCAAGGACCGCCGTGGGCACGGGGTCAGTaGGACAGGGTCCTGCTCGCGGCGTCAAGGAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: RSRQGPPWARGQ*DRVLLAASRRS Trigger: GCTCCTCCTTGACGCCGCGAGCAGGACCCTGTCTCACTGACCCCGTGCCCACGGCGGTCCTTGCCTGCTTCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531708.1 |
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| CDS GCA 72 bp | CCAACCATGATTTACAGGCGGGGACAGCCACATTCCTaGGCCCCAACTTCCACCTCCGCTTCCTGCGCGCGC | + |
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Preference number: 6 (lower is better) Translates to: PTMIYRRGQPHS*APTSTSASCAR Trigger: GCGCGCGCAGGAAGCGGAGGTGGAAGTTGGGGCGCAGGAATGTGGCTGTCCCCGCCTGTAAATCATGGTTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000532845.2 ENST00000533220.1 |
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| CDS TCA 72 bp | AGGGGCTGCTCTCGCGTCTCGTCTCGGGAGCTGTCCTaGAAGGGGGCTGCCACGCTGGTCTCATTCTGTAGA | + |
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Preference number: 6 (lower is better) Translates to: RGCSRVSSRELS*KGAATLVSFCR Trigger: TCTACAGAATGAGACCAGCGTGGCAGCCCCCTTTCAGGACAGCTCCCGAGACGAGACGCGAGAGCAGCCCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000501817.6 ENST00000531708.1 ENST00000532845.2 ENST00000658798.1 |
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| CDS TCA 72 bp | GGGCAAACCATTTCCACGTCCTGCTGCCACTGGGCATaGGGGATGTGGGTTCTCACCTCAGCTCCGCCCTCC | + |
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Preference number: 6 (lower is better) Translates to: GQTISTSCCHWA*GMWVLTSAPPS Trigger: GGAGGGCGGAGCTGAGGTGAGAACCCACATCCCTCATGCCCAGTGGCAGCAGGACGTGGAAATGGTTTGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000532845.2 |
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| CDS GCA 72 bp | GCGGCACTCCCCAGCCCGGTTAGGAAGAAACGGCTTTaGTGGGTGAGATTTAGGGGCTGCTCTCGCGTCTCG | + |
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Preference number: 6 (lower is better) Translates to: AALPSPVRKKRL*WVRFRGCSRVS Trigger: CGAGACGCGAGAGCAGCCCCTAAATCTCACCCAGCAAAGCCGTTTCTTCCTAACCGGGCTGGGGAGTGCCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000501817.6 ENST00000531708.1 ENST00000532845.2 ENST00000658798.1 |
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| CDS CCA 72 bp | GCACTCCCCAGCCCGGTTAGGAAGAAACGGCTTTGCTaGGTGAGATTTAGGGGCTGCTCTCGCGTCTCGTCT | + |
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Preference number: 6 (lower is better) Translates to: ALPSPVRKKRLC*VRFRGCSRVSS Trigger: AGACGAGACGCGAGAGCAGCCCCTAAATCTCACCCAGCAAAGCCGTTTCTTCCTAACCGGGCTGGGGAGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000501817.6 ENST00000531708.1 ENST00000532845.2 ENST00000658798.1 |
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| CDS CCA 72 bp | GGCGGGCTGCCTGAGTTCAGGAGTTTGAGACCAGCCTaGGGAACATGGCGAAATCCTGTAGTCCCAGCTACT | + |
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Preference number: 6 (lower is better) Translates to: GGLPEFRSLRPA*GTWRNPVVPAT Trigger: AGTAGCTGGGACTACAGGATTTCGCCATGTTCCCCAGGCTGGTCTCAAACTCCTGAACTCAGGCAGCCCGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000501817.6 ENST00000531708.1 ENST00000532845.2 ENST00000533220.1 ENST00000658798.1 |
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| CDS CCA 72 bp | CAGAAGGCTCAAGCTCTGTCCAAGAGAAGTGAGGGCTaGGCAAACCATTTCCACGTCCTGCTGCCACTGGGC | + |
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Preference number: 6 (lower is better) Translates to: QKAQALSKRSEG*ANHFHVLLPLG Trigger: GCCCAGTGGCAGCAGGACGTGGAAATGGTTTGCCCAGCCCTCACTTCTCTTGGACAGAGCTTGAGCCTTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000532845.2 |
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| CDS CCA 72 bp | CGTCTCGGGAGCTGTCCTGAAAGGGGGCTGCCACGCTaGTCTCATTCTGTAGAGCTGCAAATTAAGGAGCAC | + |
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Preference number: 6 (lower is better) Translates to: RLGSCPERGLPR*SHSVELQIKEH Trigger: GTGCTCCTTAATTTGCAGCTCTACAGAATGAGACCAGCGTGGCAGCCCCCTTTCAGGACAGCTCCCGAGACG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000501817.6 ENST00000531708.1 ENST00000532845.2 ENST00000658798.1 |
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| CDS TCA 72 bp | AGTTTCCCAGAAGGCTCAAGCTCTGTCCAAGAGAAGTaGGGGCTGGGCAAACCATTTCCACGTCCTGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: SFPEGSSSVQEK*GLGKPFPRPAA Trigger: GGCAGCAGGACGTGGAAATGGTTTGCCCAGCCCTCACTTCTCTTGGACAGAGCTTGAGCCTTCTGGGAAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000532845.2 |
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| CDS CCA 72 bp | CTTTCGCTTTCGCTCTCGCTTTCCAATACTCGGGACTaGGGAAACCGGGAGAATAGAAGCAGGCAAGGACCG | + |
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Preference number: 6 (lower is better) Translates to: LSLSLSLSNTRD*GNRENRSRQGP Trigger: CGGTCCTTGCCTGCTTCTATTCTCCCGGTTTCCCCAGTCCCGAGTATTGGAAAGCGAGAGCGAAAGCGAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531708.1 |
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| CDS TCA 72 bp | GCCCCAGTTCTGAAAGCCCTGTCATGTATCACTGCTTaGGCTTACCTGCCGTATGACTTCTGCCTCCATCCC | + |
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Preference number: 6 (lower is better) Translates to: APVLKALSCITA*AYLPYDFCLHP Trigger: GGGATGGAGGCAGAAGTCATACGGCAGGTAAGCTCAAGCAGTGATACATGACAGGGCTTTCAGAACTGGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000501817.6 ENST00000532845.2 ENST00000658798.1 |
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| CDS CCA 72 bp | CGTATGACTTCTGCCTCCATCCCTCTGAACCAAAGATaGGCCTCACAAGATGGACCAGAAACACAGTGGTTC | + |
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Preference number: 6 (lower is better) Translates to: RMTSASIPLNQR*ASQDGPETQWF Trigger: GAACCACTGTGTTTCTGGTCCATCTTGTGAGGCCCATCTTTGGTTCAGAGGGATGGAGGCAGAAGTCATACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000501817.6 ENST00000532845.2 ENST00000658798.1 |
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| CDS CAA 72 bp | CCAGGCTTCAGGGAGCAGAAAACGCCTGCAATTCGTTaGGACATTGCAGTGTGCTTTTGCTCTTGTTGGCTA | + |
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Preference number: 6 (lower is better) Translates to: PGFREQKTPAIR*DIAVCFCSCWL Trigger: TAGCCAACAAGAGCAAAAGCACACTGCAATGTCCAAACGAATTGCAGGCGTTTTCTGCTCCCTGAAGCCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000501817.6 ENST00000531708.1 ENST00000532845.2 ENST00000658798.1 |
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| CDS TCA 72 bp | CATGCAAATAAAGCCTGCTCTTCATGGCCCCAGTTCTaGAAGCCCTGTCATGTATCACTGCTTGAGCTTACC | + |
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Preference number: 6 (lower is better) Translates to: HANKACSSWPQF*KPCHVSLLELT Trigger: GGTAAGCTCAAGCAGTGATACATGACAGGGCTTTCAGAACTGGGGCCATGAAGAGCAGGCTTTATTTGCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000501817.6 ENST00000532845.2 ENST00000658798.1 |
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| CDS GCA 72 bp | TGCAGGTTGGGCTTCTCCAGCACTTTCTGTCTTTGCTaGATGATCCTCATGGACTGCATCCAACCTTGTAAA | + |
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Preference number: 6 (lower is better) Translates to: CRLGFSSTFCLC*MILMDCIQPCK Trigger: TTTACAAGGTTGGATGCAGTCCATGAGGATCATGCAGCAAAGACAGAAAGTGCTGGAGAAGCCCAACCTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000501817.6 ENST00000532845.2 ENST00000658798.1 |
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| CDS CCA 72 bp | CTCCATCCCTCTGAACCAAAGATGGGCCTCACAAGATaGACCAGAAACACAGTGGTTCCAAGTGGTTATAGT | + |
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Preference number: 6 (lower is better) Translates to: LHPSEPKMGLTR*TRNTVVPSGYS Trigger: ACTATAACCACTTGGAACCACTGTGTTTCTGGTCCATCTTGTGAGGCCCATCTTTGGTTCAGAGGGATGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000501817.6 ENST00000532845.2 ENST00000658798.1 |
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| CDS CAA 72 bp | AACGCCTGCAATTCGTTTGGACATTGCAGTGTGCTTTaGCTCTTGTTGGCTATAAAAAGGCCGGTTTCCGCA | + |
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Preference number: 6 (lower is better) Translates to: NACNSFGHCSVL*LLLAIKRPVSA Trigger: TGCGGAAACCGGCCTTTTTATAGCCAACAAGAGCAAAAGCACACTGCAATGTCCAAACGAATTGCAGGCGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000501817.6 ENST00000531708.1 ENST00000658798.1 |
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| CDS GCA 72 bp | AGCACTTTCTGTCTTTGCTGCATGATCCTCATGGACTaGATCCAACCTTGTAAAGTCAGCCAAGAAGAGAAA | + |
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Preference number: 6 (lower is better) Translates to: STFCLCCMILMD*IQPCKVSQEEK Trigger: TTTCTCTTCTTGGCTGACTTTACAAGGTTGGATGCAGTCCATGAGGATCATGCAGCAAAGACAGAAAGTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000501817.6 ENST00000532845.2 ENST00000658798.1 |
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| CDS GCA 72 bp | GGACATTTTCATAAAACCATGGGTCCTCTTATTAAATaGTGGAACCCAGTACTCCTCCTGCTACAACCACAC | + |
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Preference number: 6 (lower is better) Translates to: GHFHKTMGPLIK*WNPVLLLLQPH Trigger: GTGTGGTTGTAGCAGGAGGAGTACTGGGTTCCAGCATTTAATAAGAGGACCCATGGTTTTATGAAAATGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000501817.6 ENST00000532845.2 ENST00000658798.1 |
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| CDS CCA 72 bp | TCTGGACAGTCCAATCCTGTGGTTCAACTACTTCAATaGCCAGCCAAGGGAAAAGGGACTGAGTATATAAAT | + |
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Preference number: 6 (lower is better) Translates to: SGQSNPVVQLLQ*PAKGKGTEYIN Trigger: ATTTATATACTCAGTCCCTTTTCCCTTGGCTGGCCATTGAAGTAGTTGAACCACAGGATTGGACTGTCCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000501817.6 ENST00000531708.1 ENST00000532845.2 ENST00000658798.1 |
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| CDS CCA 72 bp | CAAAGATGGGCCTCACAAGATGGACCAGAAACACAGTaGTTCCAAGTGGTTATAGTAAGATTCATTTGCCAC | + |
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Preference number: 6 (lower is better) Translates to: QRWASQDGPETQ*FQVVIVRFICH Trigger: GTGGCAAATGAATCTTACTATAACCACTTGGAACCACTGTGTTTCTGGTCCATCTTGTGAGGCCCATCTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000501817.6 ENST00000532845.2 ENST00000658798.1 |
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| CDS CCA 72 bp | ATCACTGGAATGTTCAGGAACTGGGCACATAGACCCTaGAATTTTGCAACAGCAAACACATCTGAATTTGGA | + |
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Preference number: 6 (lower is better) Translates to: ITGMFRNWAHRP*NFATANTSEFG Trigger: TCCAAATTCAGATGTGTTTGCTGTTGCAAAATTCCAGGGTCTATGTGCCCAGTTCCTGAACATTCCAGTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000501817.6 ENST00000532845.2 ENST00000658798.1 |
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| CDS TCA 72 bp | GGACAATGTTACGTTCATCTTAGCAATCCCAATGCTTaGCACTATATCTGGCATGCACAAAAATTTCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: GQCYVHLSNPNA*HYIWHAQKFPP Trigger: TGGAGGAAATTTTTGTGCATGCCAGATATAGTGTCAAGCATTGGGATTGCTAAGATGAACGTAACATTGTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000501817.6 ENST00000532845.2 ENST00000658798.1 |
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| CDS CAA 72 bp | GAGCTGCCACTAAGTTCTCTGACATGCCCATGTGAATaGACATTTCCTGTTTTAGATTGTACTGAAACTAAA | + |
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Preference number: 6 (lower is better) Translates to: ELPLSSLTCPCE*TFPVLDCTETK Trigger: TTTAGTTTCAGTACAATCTAAAACAGGAAATGTCAATTCACATGGGCATGTCAGAGAACTTAGTGGCAGCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000501817.6 |
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