RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM110B (Homo sapiens)

Ensembl gene IDs: ENSG00000169122

Ensembl transcript IDs: ENST00000361488.7, ENST00000519262.5, ENST00000520369.5, ENST00000521413.1, ENST00000522059.5, ENST00000523486.5

Found 231 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGAGAAGCTCACAACACTTCAAGGAGACCTCACAACCTTCACAACTaGGTAAGCACAGAGACCCACGCTCCCTCCTTTCCACGCACTGTC +
Preference number: 1 (lower is better)
Translates to: GEAHNTSRRPHNLHN*VSTETHAPSFPRTV
Trigger: GACAGTGCGTGGAAAGGAGGGAGCGTGGGTCTCTGTGCTTACGCAGTTGTGAAGGTTGTGAGGTCTCCTTGAAGTGTTGTGAGCTTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
3UTR TCA 90 bp ACCACTTGTAGGTTTCCCTCTCTGCTGCCACATCATGGTGTCAGCTaGGTGACAGCTAACTGTACCACCTGGAAGACAGGTTATTGGGAA +
Preference number: 1 (lower is better)
Translates to: TTCRFPSLLPHHGVS*VTANCTTWKTGYWE
Trigger: TTCCCAATAACCTGTCTTCCAGGTGGTACAGTTAGCTGTCACTCAGCTGACACCATGATGTGGCAGCAGAGAGGGAAACCTACAAGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
3UTR TCA 90 bp GGCTCTGTAGCGATGGTGACGTGGAAGCCAGGTCAGTCCCCATGTTaGCAAGCATGCAACTTGAAAACATTGCACAACAAGCAACACAAA +
Preference number: 1 (lower is better)
Translates to: GSVAMVTWKPGQSPC*QACNLKTLHNKQHK
Trigger: TTTGTGTTGCTTGTTGTGCAATGTTTTCAAGTTGCATGCTTGTCAACATGGGGACTGACCTGGCTTCCACGTCACCATCGCTACAGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361488.7
3UTR CCA 90 bp CAGCTACCAAGTGTGTTCACTTTTGAATGGAAGGCTCTACTGATATaGCTGGTATTTGACTTCTGTTCATGTCTTCAGATAGCTCAAATC +
Preference number: 1 (lower is better)
Translates to: QLPSVFTFEWKALLI*LVFDFCSCLQIAQI
Trigger: GATTTGAGCTATCTGAAGACATGAACAGAAGTCAAATACCAGCCATATCAGTAGAGCCTTCCATTCAAAAGTGAACACACTTGGTAGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
3UTR CCA 90 bp GTCAGTCATTATCTGTTTGGTAGCAGATCCCATTTACTGTCCCACTaGAATAGTCTCACATGTAGGCAAAGTGGCTTTTTATTTCAAAAA +
Preference number: 1 (lower is better)
Translates to: VSHYLFGSRSHLLSH*NSLTCRQSGFLFQK
Trigger: TTTTTGAAATAAAAAGCCACTTTGCCTACATGTGAGACTATTCCAGTGGGACAGTAAATGGGATCTGCTACCAAACAGATAATGACTGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361488.7
3UTR-3UTR CCA 90 bp TGTTTGGTAGCAGATCCCATTTACTGTCCCACTGGAATAGTCTCACATGTAGGCGTAGCGATGGTGACGTaGAAGCCAGGTCAGTCCCCA +
Preference number: 2 (lower is better)
Translates to: CLVADPIYCPTGIVSHVGVAMVT*KPGQSP
Trigger: TGGGGACTGACCTGGCTTCCACGTCACCATCGCTAC...GCCTACATGTGAGACTATTCCAGTGGGACAGTAAATGGGATCTGCTACCAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
3UTR-3UTR TCA 90 bp TGTTTGGTAGCAGATCCCATTTACTGTCCCACTGGAATAGTCTCACATGTAGGCGAAACTTTTGGCAGATaGCGCGTGTTCAGCCAGGCT +
Preference number: 2 (lower is better)
Translates to: CLVADPIYCPTGIVSHVGETFGR*RVFSQA
Trigger: AGCCTGGCTGAACACGCGTCATCTGCCAAAAGTTTC...GCCTACATGTGAGACTATTCCAGTGGGACAGTAAATGGGATCTGCTACCAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
3UTR-3UTR CCA 90 bp GACAACAGAATCACGCTGCTCAGATATGGTTCAGCTACCAAGTGTGTTCACTTTACAGAAAACCCAGCCTaGTTCTATGTTCGGTCAGTC +
Preference number: 2 (lower is better)
Translates to: DNRITLLRYGSATKCVHFTENPA*FYVRSV
Trigger: GACTGACCGAACATAGAACCAGGCTGGGTTTTCTGT...AAAGTGAACACACTTGGTAGCTGAACCATATCTGAGCAGCGTGATTCTGTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
3UTR-3UTR GCA 90 bp AGTGTGTTCACTTTTGAATGGAAGGCTCTACTGATATGGCTGGTATTTGACTTCCACAACCTTCACAACTaGGTAAGCACAGAGACCCAC +
Preference number: 2 (lower is better)
Translates to: SVFTFEWKALLIWLVFDFHNLHN*VSTETH
Trigger: GTGGGTCTCTGTGCTTACGCAGTTGTGAAGGTTGTG...GAAGTCAAATACCAGCCATATCAGTAGAGCCTTCCATTCAAAAGTGAACACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
3UTR-3UTR GCA 90 bp GACAACAGAATCACGCTGCTCAGATATGGTTCAGCTACCAAGTGTGTTCACTTTTGTTACCCCAATGACTaGTTCACTAAGTGGCAAGAG +
Preference number: 2 (lower is better)
Translates to: DNRITLLRYGSATKCVHFCYPND*FTKWQE
Trigger: CTCTTGCCACTTAGTGAAGCAGTCATTGGGGTAACA...AAAGTGAACACACTTGGTAGCTGAACCATATCTGAGCAGCGTGATTCTGTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361488.7
3UTR-3UTR CCA 90 bp AGCATTGTATTTCTACAGTTTCCTAGAGCTGTAACAAAGATCCACAGCCTGAGACATTTACTGTCCCACTaGAATAGTCTCACATGTAGG +
Preference number: 2 (lower is better)
Translates to: SIVFLQFPRAVTKIHSLRHLLSH*NSLTCR
Trigger: CCTACATGTGAGACTATTCCAGTGGGACAGTAAATG...TCTCAGGCTGTGGATCTTTGTTACAGCTCTAGGAAACTGTAGAAATACAATGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
3UTR TCA 72 bp AGGTTTCCCTCTCTGCTGCCACATCATGGTGTCAGCTaGGTGACAGCTAACTGTACCACCTGGAAGACAGGT +
Preference number: 3 (lower is better)
Translates to: RFPSLLPHHGVS*VTANCTTWKTG
Trigger: ACCTGTCTTCCAGGTGGTACAGTTAGCTGTCACTCAGCTGACACCATGATGTGGCAGCAGAGAGGGAAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
3UTR GCA 72 bp CACAACACTTCAAGGAGACCTCACAACCTTCACAACTaGGTAAGCACAGAGACCCACGCTCCCTCCTTTCCA +
Preference number: 3 (lower is better)
Translates to: HNTSRRPHNLHN*VSTETHAPSFP
Trigger: TGGAAAGGAGGGAGCGTGGGTCTCTGTGCTTACGCAGTTGTGAAGGTTGTGAGGTCTCCTTGAAGTGTTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
3UTR-3UTR CAA 90 bp GTTTTGCTTACGAGCAAAGCCCTAATTAGATTCTGGCCTGAAACTTTTGGCAGAAGGTCAGTCCCCATGTaGACAAGCATGCAACTTGAA +
Preference number: 3 (lower is better)
Translates to: VLLTSKALIRFWPETFGRRSVPM*TSMQLE
Trigger: TTCAAGTTGCATGCTTGTCAACATGGGGACTGACCT...TCTGCCAAAAGTTTCAGGCCAGAATCTAATTAGGGCTTTGCTCGTAAGCAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361488.7
3UTR-3UTR CAA 90 bp AGTGTGTTCACTTTTGAATGGAAGGCTCTACTGATATGGCTGGTATTTGACTTCTCTGGCCTGAAACTTTaGGCAGATGACGCGTGTTCA +
Preference number: 3 (lower is better)
Translates to: SVFTFEWKALLIWLVFDFSGLKL*ADDACS
Trigger: TGAACACGCGTCATCTGCCAAAAGTTTCAGGCCAGA...GAAGTCAAATACCAGCCATATCAGTAGAGCCTTCCATTCAAAAGTGAACACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
3UTR-3UTR CAA 90 bp CTCACCACTTTATTCCACAGAAAACCCAGCCTGGTTCTATGTTCGGTCAGTCATTGCAACTTGAAAACATaGCACAACAAGCAACACAAA +
Preference number: 3 (lower is better)
Translates to: LTTLFHRKPSLVLCSVSHCNLKT*HNKQHK
Trigger: TTTGTGTTGCTTGTTGTGCAATGTTTTCAAGTTGCA...ATGACTGACCGAACATAGAACCAGGCTGGGTTTTCTGTGGAATAAAGTGGTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361488.7
3UTR CCA 72 bp TATCTGTTTGGTAGCAGATCCCATTTACTGTCCCACTaGAATAGTCTCACATGTAGGCAAAGTGGCTTTTTA +
Preference number: 3 (lower is better)
Translates to: YLFGSRSHLLSH*NSLTCRQSGFL
Trigger: TAAAAAGCCACTTTGCCTACATGTGAGACTATTCCAGTGGGACAGTAAATGGGATCTGCTACCAAACAGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361488.7
3UTR-3UTR CAA 90 bp AGTGTGTTCACTTTTGAATGGAAGGCTCTACTGATATGGCTGGTATTTGACTTCTCTGATCGTCTTTCCTaGGGGTCAGTATTACATAGA +
Preference number: 3 (lower is better)
Translates to: SVFTFEWKALLIWLVFDFSDRLS*GSVLHR
Trigger: TCTATGTAATACTGACCCCAAGGAAAGACGATCAGA...GAAGTCAAATACCAGCCATATCAGTAGAGCCTTCCATTCAAAAGTGAACACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361488.7
3UTR TCA 72 bp TACCAAGTGTGTTCACTTTTGAATGGAAGGCTCTACTaGTATGGCTGGTATTTGACTTCTGTTCATGTCTTC +
Preference number: 3 (lower is better)
Translates to: YQVCSLLNGRLY*YGWYLTSVHVF
Trigger: GAAGACATGAACAGAAGTCAAATACCAGCCATATCAGTAGAGCCTTCCATTCAAAAGTGAACACACTTGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
3UTR CCA 72 bp AGTGTGTTCACTTTTGAATGGAAGGCTCTACTGATATaGCTGGTATTTGACTTCTGTTCATGTCTTCAGATA +
Preference number: 3 (lower is better)
Translates to: SVFTFEWKALLI*LVFDFCSCLQI
Trigger: TATCTGAAGACATGAACAGAAGTCAAATACCAGCCATATCAGTAGAGCCTTCCATTCAAAAGTGAACACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
3UTR CCA 72 bp TTTAACCATCTTTCTTTGTATCTGATCGTCTTTCCTTaGGGTCAGTATTACATAGAACCACCAACGTTTACA +
Preference number: 3 (lower is better)
Translates to: FNHLSLYLIVFP*GQYYIEPPTFT
Trigger: TGTAAACGTTGGTGGTTCTATGTAATACTGACCCCAAGGAAAGACGATCAGATACAAAGAAAGATGGTTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR CCA 90 bp AAACTTTTGGCAGATGACGCGTGTTCAGCCAGGCTCTGTAGCGATGGTGACGTGTGCCCAGTGCGCGCTTaGCAGCCGGGCACACCGGGG +
Preference number: 4 (lower is better)
Translates to: KLLADDACSARLCSDGDVCPVRA*QPGTPG
Trigger: CCCCGGTGTGCCCGGCTGCCAAGCGCGCACTGGGCA...CACGTCACCATCGCTACAGAGCCTGGCTGAACACGCGTCATCTGCCAAAAGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR CCA 90 bp AAACTTTTGGCAGATGACGCGTGTTCAGCCAGGCTCTGTAGCGATGGTGACGTGGAGAGCAGACGGGGCTaGCGGAACGGGCCCAGGACG +
Preference number: 4 (lower is better)
Translates to: KLLADDACSARLCSDGDVESRRG*RNGPRT
Trigger: CGTCCTGGGCCCGTTCCGCCAGCCCCGTCTGCTCTC...CACGTCACCATCGCTACAGAGCCTGGCTGAACACGCGTCATCTGCCAAAAGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR TCA 90 bp AAACTTTTGGCAGATGACGCGTGTTCAGCCAGGCTCTGTAGCGATGGTGACGTGGCCTCTCCACGGCGCTaGGCCTCTTGGGGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: KLLADDACSARLCSDGDVASPRR*ASWGWA
Trigger: AGCCCAACCCCAAGAGGCTCAGCGCCGTGGAGAGGC...CACGTCACCATCGCTACAGAGCCTGGCTGAACACGCGTCATCTGCCAAAAGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR GCA 90 bp GAGACCTCACAACCTTCACAACTGCGTAAGCACAGAGACCCACGCTCCCTCCTTGGCAGCCGTGTTGGATaGTCTTCTGGGCGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: ETSQPSQLRKHRDPRSLLGSRVG*SSGRLR
Trigger: GCGGAGGCGCCCAGAAGAGCATCCAACACGGCTGCC...AAGGAGGGAGCGTGGGTCTCTGTGCTTACGCAGTTGTGAAGGTTGTGAGGTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR GCA 90 bp AAACTTTTGGCAGATGACGCGTGTTCAGCCAGGCTCTGTAGCGATGGTGACGTGGCTCCAGCAGTCTCCTaGCCACGTGGGAGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: KLLADDACSARLCSDGDVAPAVS*PRGSRP
Trigger: AGGGCGGCTCCCACGTGGGCAGGAGACTGCTGGAGC...CACGTCACCATCGCTACAGAGCCTGGCTGAACACGCGTCATCTGCCAAAAGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR CCA 90 bp GAGACCTCACAACCTTCACAACTGCGTAAGCACAGAGACCCACGCTCCCTCCTTCCCCGGCAGCCGTGTTaGATGCTCTTCTGGGCGCCT +
Preference number: 4 (lower is better)
Translates to: ETSQPSQLRKHRDPRSLLPRQPC*MLFWAP
Trigger: AGGCGCCCAGAAGAGCATCCAACACGGCTGCCGGGG...AAGGAGGGAGCGTGGGTCTCTGTGCTTACGCAGTTGTGAAGGTTGTGAGGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR TCA 90 bp AAACTTTTGGCAGATGACGCGTGTTCAGCCAGGCTCTGTAGCGATGGTGACGTGGGTTGCCGAACACTTTaGGCGTGGGGCTGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: KLLADDACSARLCSDGDVGCRTL*AWGCPV
Trigger: CACTGGGCAGCCCCACGCTCAAAGTGTTCGGCAACC...CACGTCACCATCGCTACAGAGCCTGGCTGAACACGCGTCATCTGCCAAAAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR GCA 90 bp TGTTTGGTAGCAGATCCCATTTACTGTCCCACTGGAATAGTCTCACATGTAGGCCGTGGGGCTGCCCAGTaGGCGCTTGGCAGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: CLVADPIYCPTGIVSHVGRGAAQ*ALGSRA
Trigger: TGCCCGGCTGCCAAGCGCGCACTGGGCAGCCCCACG...GCCTACATGTGAGACTATTCCAGTGGGACAGTAAATGGGATCTGCTACCAAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR GCA 90 bp ACTTCAAGGAGACCTCACAACCTTCACAACTGCGTAAGCACAGAGACCCACGCTCAGTTGCGGGAGCTGTaGTTGTGCCCCGAGCCCGAG +
Preference number: 4 (lower is better)
Translates to: TSRRPHNLHNCVSTETHAQLREL*LCPEPE
Trigger: CTCGGGCTCGGGGCACAAGCACAGCTCCCGCAACTG...AGCGTGGGTCTCTGTGCTTACGCAGTTGTGAAGGTTGTGAGGTCTCCTTGAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR GCA 90 bp CGTCAGGCTCACCACTTTATTCCACAGAAAACCCAGCCTGGTTCTATGTTCGGTGGTGGGGCGGCCAGTTaGGGGAGCTGTGCTTGTGCC +
Preference number: 4 (lower is better)
Translates to: RQAHHFIPQKTQPGSMFGGGAAS*GSCACA
Trigger: GGCACAAGCACAGCTCCCGCAACTGGCCGCCCCACC...ACCGAACATAGAACCAGGCTGGGTTTTCTGTGGAATAAAGTGGTGAGCCTGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR CCA 90 bp CGTCAGGCTCACCACTTTATTCCACAGAAAACCCAGCCTGGTTCTATGTTCGGTGGGTCTCCGTGGGCATaGTGGGCGGTCTTTCCCCGG +
Preference number: 4 (lower is better)
Translates to: RQAHHFIPQKTQPGSMFGGSPWA*WAVFPR
Trigger: CCGGGGAAAGACCGCCCACCATGCCCACGGAGACCC...ACCGAACATAGAACCAGGCTGGGTTTTCTGTGGAATAAAGTGGTGAGCCTGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR CCA 90 bp GAGACCTCACAACCTTCACAACTGCGTAAGCACAGAGACCCACGCTCCCTCCTTCGCCGCTCTCGGTCTTaGCGTGGTTGCCGAACACTT +
Preference number: 4 (lower is better)
Translates to: ETSQPSQLRKHRDPRSLLRRSRS*RGCRTL
Trigger: AAGTGTTCGGCAACCACGCCAAGACCGAGAGCGGCG...AAGGAGGGAGCGTGGGTCTCTGTGCTTACGCAGTTGTGAAGGTTGTGAGGTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR GCA 90 bp CGTCAGGCTCACCACTTTATTCCACAGAAAACCCAGCCTGGTTCTATGTTCGGTTGGGCTCGGCCTGCCTaGGGAAGTAGTCTGGCCCCT +
Preference number: 4 (lower is better)
Translates to: RQAHHFIPQKTQPGSMFGWARPA*GSSLAP
Trigger: AGGGGCCAGACTACTTCCGCAGGCAGGCCGAGCCCA...ACCGAACATAGAACCAGGCTGGGTTTTCTGTGGAATAAAGTGGTGAGCCTGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR TCA 90 bp AAACTTTTGGCAGATGACGCGTGTTCAGCCAGGCTCTGTAGCGATGGTGACGTGATAGACACATGTACATaGAGCGCCAAGGGCGGCGGG +
Preference number: 4 (lower is better)
Translates to: KLLADDACSARLCSDGDVIDTCT*SAKGGG
Trigger: CCCGCCGCCCTTGGCGCTTCATGTACATGTGTCTAT...CACGTCACCATCGCTACAGAGCCTGGCTGAACACGCGTCATCTGCCAAAAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR GCA 90 bp TGTTTGGTAGCAGATCCCATTTACTGTCCCACTGGAATAGTCTCACATGTAGGCAGGGCACCGGGCTGGTaGATCGCAGCCTTCGGTGCC +
Preference number: 4 (lower is better)
Translates to: CLVADPIYCPTGIVSHVGRAPGW*IAAFGA
Trigger: GGCACCGAAGGCTGCGATGCACCAGCCCGGTGCCCT...GCCTACATGTGAGACTATTCCAGTGGGACAGTAAATGGGATCTGCTACCAAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR GCA 90 bp ACATTGCACAACAAGCAACACAAAGAGTGGAGAAGCTCACAACACTTCAAGGAGCCTCCTGCGGGCTCCTaGGGCCCTGCGTGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: TLHNKQHKEWRSSQHFKEPPAGS*GPAWGR
Trigger: TCTACCCCACGCAGGGCCGCAGGAGCCCGCAGGAGG...CTCCTTGAAGTGTTGTGAGCTTCTCCACTCTTTGTGTTGCTTGTTGTGCAATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR CCA 90 bp ACATTGCACAACAAGCAACACAAAGAGTGGAGAAGCTCACAACACTTCAAGGAGGGCACACCGGGGGCTTaGCCAGCACGGCGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: TLHNKQHKEWRSSQHFKEGTPGA*PARRAS
Trigger: TGAAGCCCGCCGTGCTGGCCAAGCCCCCGGTGTGCC...CTCCTTGAAGTGTTGTGAGCTTCTCCACTCTTTGTGTTGCTTGTTGTGCAATGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR CCA 90 bp ACGATTAACGTCAGGCTCACCACTTTATTCCACAGAAAACCCAGCCTGGTTCTAGACGGTGCAGGTCAGTaGCTTCCGACCGGTGGGGCG +
Preference number: 4 (lower is better)
Translates to: TINVRLTTLFHRKPSLVLDGAGQ*LPTGGA
Trigger: CGCCCCACCGGTCGGAAGCCACTGACCTGCACCGTC...TAGAACCAGGCTGGGTTTTCTGTGGAATAAAGTGGTGAGCCTGACGTTAATCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR CCA 90 bp GACAACAGAATCACGCTGCTCAGATATGGTTCAGCTACCAAGTGTGTTCACTTTAGTCTCCTGCCCACGTaGGAGCCGCCCTCCTGCGGG +
Preference number: 4 (lower is better)
Translates to: DNRITLLRYGSATKCVHFSLLPT*EPPSCG
Trigger: CCCGCAGGAGGGCGGCTCCCACGTGGGCAGGAGACT...AAAGTGAACACACTTGGTAGCTGAACCATATCTGAGCAGCGTGATTCTGTTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR TCA 90 bp CCACTTTATTCCACAGAAAACCCAGCCTGGTTCTATGTTCGGTCAGTCATTATCAGGTGCCCGCGGGGCTaGCCGGCTTCACCATGCTAC +
Preference number: 4 (lower is better)
Translates to: PLYSTENPAWFYVRSVIIRCPRG*PASPCY
Trigger: GTAGCATGGTGAAGCCGGTCAGCCCCGCGGGCACCT...GATAATGACTGACCGAACATAGAACCAGGCTGGGTTTTCTGTGGAATAAAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR TCA 90 bp GAGACCTCACAACCTTCACAACTGCGTAAGCACAGAGACCCACGCTCCCTCCTTTCTGTCACTCAAGTCTaGCTTAGACCGCTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: ETSQPSQLRKHRDPRSLLSVTQV*LRPLEG
Trigger: TCCCTCCAGCGGTCTAAGTCAGACTTGAGTGACAGA...AAGGAGGGAGCGTGGGTCTCTGTGCTTACGCAGTTGTGAAGGTTGTGAGGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR CCA 90 bp AAACTTTTGGCAGATGACGCGTGTTCAGCCAGGCTCTGTAGCGATGGTGACGTGGCGTTGATCACCTCCTaGCTCTTGACGTACTTGGCC +
Preference number: 4 (lower is better)
Translates to: KLLADDACSARLCSDGDVALITS*LLTYLA
Trigger: GGCCAAGTACGTCAAGAGCCAGGAGGTGATCAACGC...CACGTCACCATCGCTACAGAGCCTGGCTGAACACGCGTCATCTGCCAAAAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR GCA 90 bp CTCACCACTTTATTCCACAGAAAACCCAGCCTGGTTCTATGTTCGGTCAGTCATGCCCCTTGTTCAGGATaGGCAGGGGCACAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: LTTLFHRKPSLVLCSVSHAPCSG*AGAQQR
Trigger: CCTCTGCTGTGCCCCTGCGCATCCTGAACAAGGGGC...ATGACTGACCGAACATAGAACCAGGCTGGGTTTTCTGTGGAATAAAGTGGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR GCA 90 bp ACATTGCACAACAAGCAACACAAAGAGTGGAGAAGCTCACAACACTTCAAGGAGCGGGAGCTGTGCTTGTaGCCCGAGCCCGAGCTAGAG +
Preference number: 4 (lower is better)
Translates to: TLHNKQHKEWRSSQHFKERELCL*PEPELE
Trigger: CTCTAGCTCGGGCTCGGGGCACAAGCACAGCTCCCG...CTCCTTGAAGTGTTGTGAGCTTCTCCACTCTTTGTGTTGCTTGTTGTGCAATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR CCA 90 bp GACAACAGAATCACGCTGCTCAGATATGGTTCAGCTACCAAGTGTGTTCACTTTTCTCCGTGGGCATGGTaGGCGGTCTTTCCCCGGCAG +
Preference number: 4 (lower is better)
Translates to: DNRITLLRYGSATKCVHFSPWAW*AVFPRQ
Trigger: CTGCCGGGGAAAGACCGCCCACCATGCCCACGGAGA...AAAGTGAACACACTTGGTAGCTGAACCATATCTGAGCAGCGTGATTCTGTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR CCA 90 bp CGTCAGGCTCACCACTTTATTCCACAGAAAACCCAGCCTGGTTCTATGTTCGGTTCTGTAGGGTCTCCGTaGGCATGGTGGGCGGTCTTT +
Preference number: 4 (lower is better)
Translates to: RQAHHFIPQKTQPGSMFGSVGSP*AWWAVF
Trigger: AAAGACCGCCCACCATGCCCACGGAGACCCTACAGA...ACCGAACATAGAACCAGGCTGGGTTTTCTGTGGAATAAAGTGGTGAGCCTGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR CCA 90 bp AGTGTGTTCACTTTTGAATGGAAGGCTCTACTGATATGGCTGGTATTTGACTTCGTGGCTTCCGACCGGTaGGGCGGCCAGTTGCGGGAG +
Preference number: 4 (lower is better)
Translates to: SVFTFEWKALLIWLVFDFVASDR*GGQLRE
Trigger: CTCCCGCAACTGGCCGCCCCACCGGTCGGAAGCCAC...GAAGTCAAATACCAGCCATATCAGTAGAGCCTTCCATTCAAAAGTGAACACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR CCA 90 bp AGAAGCTCACAACACTTCAAGGAGACCTCACAACCTTCACAACTGCGTAAGCACCGATGGCTGCGATTTTaGGCTTGGGAGGCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: RSSQHFKETSQPSQLRKHRWLRF*AWEAGE
Trigger: CTCCCCTGCCTCCCAAGCCCAAAATCGCAGCCATCG...GTGCTTACGCAGTTGTGAAGGTTGTGAGGTCTCCTTGAAGTGTTGTGAGCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR TCA 90 bp CTCACCACTTTATTCCACAGAAAACCCAGCCTGGTTCTATGTTCGGTCAGTCATGAGGAAGGACTCGGCTaGCTGCTCCAGCAGTCTCCT +
Preference number: 4 (lower is better)
Translates to: LTTLFHRKPSLVLCSVSHEEGLG*LLQQSP
Trigger: AGGAGACTGCTGGAGCAGTCAGCCGAGTCCTTCCTC...ATGACTGACCGAACATAGAACCAGGCTGGGTTTTCTGTGGAATAAAGTGGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR TCA 90 bp CCACTTTATTCCACAGAAAACCCAGCCTGGTTCTATGTTCGGTCAGTCATTATCTGCAGGGGATGGCCTTaGGGGGCTTCACGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: PLYSTENPAWFYVRSVIICRGWP*GASRWS
Trigger: TGACCAGCGTGAAGCCCCTCAAGGCCATCCCCTGCA...GATAATGACTGACCGAACATAGAACCAGGCTGGGTTTTCTGTGGAATAAAGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR TCA 90 bp CTCACCACTTTATTCCACAGAAAACCCAGCCTGGTTCTATGTTCGGTCAGTCATGGGAGGGTCTTCGGCTaGCTCCACAAGCTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: LTTLFHRKPSLVLCSVSHGRVFG*LHKLVP
Trigger: TGGAACCAGCTTGTGGAGTCAGCCGAAGACCCTCCC...ATGACTGACCGAACATAGAACCAGGCTGGGTTTTCTGTGGAATAAAGTGGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR GCA 90 bp TGTTTGGTAGCAGATCCCATTTACTGTCCCACTGGAATAGTCTCACATGTAGGCGGCTTCACGGGCTCCTaGTTGGCGTTGATCACCTCC +
Preference number: 4 (lower is better)
Translates to: CLVADPIYCPTGIVSHVGGFTGS*LALITS
Trigger: GGAGGTGATCAACGCCAAGCAGGAGCCCGTGAAGCC...GCCTACATGTGAGACTATTCCAGTGGGACAGTAAATGGGATCTGCTACCAAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR GCA 90 bp GAGACCTCACAACCTTCACAACTGCGTAAGCACAGAGACCCACGCTCCCTCCTTCAGATAGCTCAAATCTaGACAAGCCTCACTCCCTTC +
Preference number: 4 (lower is better)
Translates to: ETSQPSQLRKHRDPRSLLQIAQI*TSLTPF
Trigger: GAAGGGAGTGAGGCTTGTGCAGATTTGAGCTATCTG...AAGGAGGGAGCGTGGGTCTCTGTGCTTACGCAGTTGTGAAGGTTGTGAGGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR CCA 90 bp GTTTTGCTTACGAGCAAAGCCCTAATTAGATTCTGGCCTGAAACTTTTGGCAGACACAGGGCACCGGGCTaGTGCATCGCAGCCTTCGGT +
Preference number: 4 (lower is better)
Translates to: VLLTSKALIRFWPETFGRHRAPG*CIAAFG
Trigger: ACCGAAGGCTGCGATGCACCAGCCCGGTGCCCTGTG...TCTGCCAAAAGTTTCAGGCCAGAATCTAATTAGGGCTTTGCTCGTAAGCAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR CCA 90 bp AGTGTGTTCACTTTTGAATGGAAGGCTCTACTGATATGGCTGGTATTTGACTTCGCGGCGGGTGCAGCCTaGGAGCGAGTGTCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: SVFTFEWKALLIWLVFDFAAGAA*ERVSAA
Trigger: TGCTGCTGACACTCGCTCCCAGGCTGCACCCGCCGC...GAAGTCAAATACCAGCCATATCAGTAGAGCCTTCCATTCAAAAGTGAACACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR TCA 90 bp GTTTTGCTTACGAGCAAAGCCCTAATTAGATTCTGGCCTGAAACTTTTGGCAGAGACTCCGCGAAGGAGTaGCGGTGCAGGTCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: VLLTSKALIRFWPETFGRDSAKE*RCRSVA
Trigger: AGCCACTGACCTGCACCGTCACTCCTTCGCGGAGTC...TCTGCCAAAAGTTTCAGGCCAGAATCTAATTAGGGCTTTGCTCGTAAGCAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR TCA 90 bp AAACTTTTGGCAGATGACGCGTGTTCAGCCAGGCTCTGTAGCGATGGTGACGTGGGTCAGTCCCCATGTTaGCAAGCATGCAACTTGAAA +
Preference number: 4 (lower is better)
Translates to: KLLADDACSARLCSDGDVGQSPC*QACNLK
Trigger: TTTCAAGTTGCATGCTTGTCAACATGGGGACTGACC...CACGTCACCATCGCTACAGAGCCTGGCTGAACACGCGTCATCTGCCAAAAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR TCA 90 bp CGTCAGGCTCACCACTTTATTCCACAGAAAACCCAGCCTGGTTCTATGTTCGGTGAAACTTTTGGCAGATaGCGCGTGTTCAGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: RQAHHFIPQKTQPGSMFGETFGR*RVFSQA
Trigger: AGCCTGGCTGAACACGCGTCATCTGCCAAAAGTTTC...ACCGAACATAGAACCAGGCTGGGTTTTCTGTGGAATAAAGTGGTGAGCCTGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR TCA 90 bp ACTTCAAGGAGACCTCACAACCTTCACAACTGCGTAAGCACAGAGACCCACGCTATGGTGTCAGCTGAGTaGCAGCTAACTGTACCACCT +
Preference number: 4 (lower is better)
Translates to: TSRRPHNLHNCVSTETHAMVSAE*QLTVPP
Trigger: AGGTGGTACAGTTAGCTGTCACTCAGCTGACACCAT...AGCGTGGGTCTCTGTGCTTACGCAGTTGTGAAGGTTGTGAGGTCTCCTTGAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR TCA 90 bp ACTTCAAGGAGACCTCACAACCTTCACAACTGCGTAAGCACAGAGACCCACGCTCATCATGGTGTCAGCTaGGTGACAGCTAACTGTACC +
Preference number: 4 (lower is better)
Translates to: TSRRPHNLHNCVSTETHAHHGVS*VTANCT
Trigger: GGTACAGTTAGCTGTCACTCAGCTGACACCATGATG...AGCGTGGGTCTCTGTGCTTACGCAGTTGTGAAGGTTGTGAGGTCTCCTTGAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR GCA 90 bp GACAACAGAATCACGCTGCTCAGATATGGTTCAGCTACCAAGTGTGTTCACTTTAAGGACTCGGCTGACTaGTCCAGCAGTCTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: DNRITLLRYGSATKCVHFKDSAD*SSSLLP
Trigger: GGGCAGGAGACTGCTGGAGCAGTCAGCCGAGTCCTT...AAAGTGAACACACTTGGTAGCTGAACCATATCTGAGCAGCGTGATTCTGTTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR CCA 90 bp ACATTGCACAACAAGCAACACAAAGAGTGGAGAAGCTCACAACACTTCAAGGAGTGTTGGATGCTCTTCTaGGCGCCTCCGCAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: TLHNKQHKEWRSSQHFKECWMLF*APPQGL
Trigger: CAGGCCTTGCGGAGGCGCCCAGAAGAGCATCCAACA...CTCCTTGAAGTGTTGTGAGCTTCTCCACTCTTTGTGTTGCTTGTTGTGCAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR CCA 90 bp ACGATTAACGTCAGGCTCACCACTTTATTCCACAGAAAACCCAGCCTGGTTCTAGTAGCGATGGTGACGTaGAAGCCAGGTCAGTCCCCA +
Preference number: 4 (lower is better)
Translates to: TINVRLTTLFHRKPSLVLVAMVT*KPGQSP
Trigger: TGGGGACTGACCTGGCTTCCACGTCACCATCGCTAC...TAGAACCAGGCTGGGTTTTCTGTGGAATAAAGTGGTGAGCCTGACGTTAATCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR TCA 90 bp CTCACCACTTTATTCCACAGAAAACCCAGCCTGGTTCTATGTTCGGTCAGTCATCCAGTCCACAGTAGTTaGAGAACCTCTCCACGTCCG +
Preference number: 4 (lower is better)
Translates to: LTTLFHRKPSLVLCSVSHPVHSS*RTSPRP
Trigger: CGGACGTGGAGAGGTTCTTCAACTACTGTGGACTGG...ATGACTGACCGAACATAGAACCAGGCTGGGTTTTCTGTGGAATAAAGTGGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR CCA 90 bp CTCACCACTTTATTCCACAGAAAACCCAGCCTGGTTCTATGTTCGGTCAGTCATCAATTTGGAGATTTCTaGGCCGCTCACCCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: LTTLFHRKPSLVLCSVSHQFGDF*AAHPSP
Trigger: GGGACTGGGGTGAGCGGCCCAGAAATCTCCAAATTG...ATGACTGACCGAACATAGAACCAGGCTGGGTTTTCTGTGGAATAAAGTGGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR CCA 90 bp AGCATTGTATTTCTACAGTTTCCTAGAGCTGTAACAAAGATCCACAGCCTGAGATCCTGCGGCCCTGCGTaGGGTAGACCTTCAGGGACT +
Preference number: 4 (lower is better)
Translates to: SIVFLQFPRAVTKIHSLRSCGPA*GRPSGT
Trigger: AGTCCCTGAAGGTCTACCCCACGCAGGGCCGCAGGA...TCTCAGGCTGTGGATCTTTGTTACAGCTCTAGGAAACTGTAGAAATACAATGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR CCA 90 bp GACAACAGAATCACGCTGCTCAGATATGGTTCAGCTACCAAGTGTGTTCACTTTTCTGACTTAGACCGCTaGAGGGAGGGTCTTCGGCTG +
Preference number: 4 (lower is better)
Translates to: DNRITLLRYGSATKCVHFSDLDR*REGLRL
Trigger: CAGCCGAAGACCCTCCCTCCAGCGGTCTAAGTCAGA...AAAGTGAACACACTTGGTAGCTGAACCATATCTGAGCAGCGTGATTCTGTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR CCA 90 bp ACTTCAAGGAGACCTCACAACCTTCACAACTGCGTAAGCACAGAGACCCACGCTACAGAAAACCCAGCCTaGTTCTATGTTCGGTCAGTC +
Preference number: 4 (lower is better)
Translates to: TSRRPHNLHNCVSTETHATENPA*FYVRSV
Trigger: GACTGACCGAACATAGAACCAGGCTGGGTTTTCTGT...AGCGTGGGTCTCTGTGCTTACGCAGTTGTGAAGGTTGTGAGGTCTCCTTGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR TCA 90 bp ACATTGCACAACAAGCAACACAAAGAGTGGAGAAGCTCACAACACTTCAAGGAGCTTCGGTGCCTCAGCTaGCATTTACTGGCCACCTCT +
Preference number: 4 (lower is better)
Translates to: TLHNKQHKEWRSSQHFKELRCLS*HLLATS
Trigger: AGAGGTGGCCAGTAAATGTCAGCTGAGGCACCGAAG...CTCCTTGAAGTGTTGTGAGCTTCTCCACTCTTTGTGTTGCTTGTTGTGCAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR GCA 90 bp GACAACAGAATCACGCTGCTCAGATATGGTTCAGCTACCAAGTGTGTTCACTTTTCACGCTGGTCACCTTaGGGATGTCCGAAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: DNRITLLRYGSATKCVHFSRWSP*GCPKSC
Trigger: ACAGCTCTTCGGACATCCGCAAGGTGACCAGCGTGA...AAAGTGAACACACTTGGTAGCTGAACCATATCTGAGCAGCGTGATTCTGTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR GCA 90 bp GTTTTGCTTACGAGCAAAGCCCTAATTAGATTCTGGCCTGAAACTTTTGGCAGACATGGAGGCGATGGCTaGGATTTTGGGCTTGGGAGG +
Preference number: 4 (lower is better)
Translates to: VLLTSKALIRFWPETFGRHGGDG*DFGLGR
Trigger: CCTCCCAAGCCCAAAATCGCAGCCATCGCCTCCATG...TCTGCCAAAAGTTTCAGGCCAGAATCTAATTAGGGCTTTGCTCGTAAGCAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR CCA 90 bp CGTCAGGCTCACCACTTTATTCCACAGAAAACCCAGCCTGGTTCTATGTTCGGTTCTGGATGTCCAATTTaGAGATTTCTGGGCCGCTCA +
Preference number: 4 (lower is better)
Translates to: RQAHHFIPQKTQPGSMFGSGCPI*RFLGRS
Trigger: TGAGCGGCCCAGAAATCTCCAAATTGGACATCCAGA...ACCGAACATAGAACCAGGCTGGGTTTTCTGTGGAATAAAGTGGTGAGCCTGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR CCA 90 bp GACAACAGAATCACGCTGCTCAGATATGGTTCAGCTACCAAGTGTGTTCACTTTCTCTCGGTCTTGGCGTaGTTGCCGAACACTTTGAGC +
Preference number: 4 (lower is better)
Translates to: DNRITLLRYGSATKCVHFLSVLA*LPNTLS
Trigger: GCTCAAAGTGTTCGGCAACCACGCCAAGACCGAGAG...AAAGTGAACACACTTGGTAGCTGAACCATATCTGAGCAGCGTGATTCTGTTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR CCA 90 bp AGTGTGTTCACTTTTGAATGGAAGGCTCTACTGATATGGCTGGTATTTGACTTCGAGCTGTGGGACACGTaGAGGAAGGACTCGGCTGAC +
Preference number: 4 (lower is better)
Translates to: SVFTFEWKALLIWLVFDFELWDT*RKDSAD
Trigger: GTCAGCCGAGTCCTTCCTCCACGTGTCCCACAGCTC...GAAGTCAAATACCAGCCATATCAGTAGAGCCTTCCATTCAAAAGTGAACACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR CCA 90 bp AGCATTGTATTTCTACAGTTTCCTAGAGCTGTAACAAAGATCCACAGCCTGAGAGCTGACTCCACAAGCTaGTTCCACAGGGTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: SIVFLQFPRAVTKIHSLRADSTS*FHRVGL
Trigger: GAGGCCGACCCTGTGGAACCAGCTTGTGGAGTCAGC...TCTCAGGCTGTGGATCTTTGTTACAGCTCTAGGAAACTGTAGAAATACAATGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR CCA 90 bp GAGACCTCACAACCTTCACAACTGCGTAAGCACAGAGACCCACGCTCCCTCCTTCTGATCGTCTTTCCTTaGGGTCAGTATTACATAGAA +
Preference number: 4 (lower is better)
Translates to: ETSQPSQLRKHRDPRSLLLIVFP*GQYYIE
Trigger: TTCTATGTAATACTGACCCCAAGGAAAGACGATCAG...AAGGAGGGAGCGTGGGTCTCTGTGCTTACGCAGTTGTGAAGGTTGTGAGGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR CCA 90 bp ACTTCAAGGAGACCTCACAACCTTCACAACTGCGTAAGCACAGAGACCCACGCTGCTAACTGTACCACCTaGAAGACAGGTTATTGGGAA +
Preference number: 4 (lower is better)
Translates to: TSRRPHNLHNCVSTETHAANCTT*KTGYWE
Trigger: TTCCCAATAACCTGTCTTCCAGGTGGTACAGTTAGC...AGCGTGGGTCTCTGTGCTTACGCAGTTGTGAAGGTTGTGAGGTCTCCTTGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR TCA 90 bp AGAAGCTCACAACACTTCAAGGAGACCTCACAACCTTCACAACTGCGTAAGCACTCACTGTTACTGTCCTaGGACTGTTCACAGTCTGAG +
Preference number: 4 (lower is better)
Translates to: RSSQHFKETSQPSQLRKHSLLLS*DCSQSE
Trigger: CTCAGACTGTGAACAGTCTCAGGACAGTAACAGTGA...GTGCTTACGCAGTTGTGAAGGTTGTGAGGTCTCCTTGAAGTGTTGTGAGCTTCT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR GCA 90 bp ACTTCAAGGAGACCTCACAACCTTCACAACTGCGTAAGCACAGAGACCCACGCTCAAGTTCCTTTAATCTaGTTCGCTGCCTCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: TSRRPHNLHNCVSTETHAQVPLI*FAASFL
Trigger: AAGAAAGGAGGCAGCGAAGCAGATTAAAGGAACTTG...AGCGTGGGTCTCTGTGCTTACGCAGTTGTGAAGGTTGTGAGGTCTCCTTGAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR GCA 90 bp AGCATTGTATTTCTACAGTTTCCTAGAGCTGTAACAAAGATCCACAGCCTGAGACTTCCAGGCGGCCCTTaGACAAAAAGGCCACAAGCC +
Preference number: 4 (lower is better)
Translates to: SIVFLQFPRAVTKIHSLRLPGGP*TKRPQA
Trigger: GGCTTGTGGCCTTTTTGTGCAAGGGCCGCCTGGAAG...TCTCAGGCTGTGGATCTTTGTTACAGCTCTAGGAAACTGTAGAAATACAATGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR GCA 90 bp AGCATTGTATTTCTACAGTTTCCTAGAGCTGTAACAAAGATCCACAGCCTGAGATTCAGGTTCTCCCTCTaGACGCCGCTCTCGGTCTTG +
Preference number: 4 (lower is better)
Translates to: SIVFLQFPRAVTKIHSLRFRFSL*TPLSVL
Trigger: CAAGACCGAGAGCGGCGTGCAGAGGGAGAACCTGAA...TCTCAGGCTGTGGATCTTTGTTACAGCTCTAGGAAACTGTAGAAATACAATGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR CCA 90 bp GACAACAGAATCACGCTGCTCAGATATGGTTCAGCTACCAAGTGTGTTCACTTTTTACCACTATTGATGTaGCCGTCCTCACAGGGCACC +
Preference number: 4 (lower is better)
Translates to: DNRITLLRYGSATKCVHFLPLLM*PSSQGT
Trigger: GGTGCCCTGTGAGGACGGCCACATCAATAGTGGTAA...AAAGTGAACACACTTGGTAGCTGAACCATATCTGAGCAGCGTGATTCTGTTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR CCA 90 bp AGCATTGTATTTCTACAGTTTCCTAGAGCTGTAACAAAGATCCACAGCCTGAGACCTGCGGAAGTAGTCTaGCCCCTTGTTCAGGATGCG +
Preference number: 4 (lower is better)
Translates to: SIVFLQFPRAVTKIHSLRPAEVV*PLVQDA
Trigger: CGCATCCTGAACAAGGGGCCAGACTACTTCCGCAGG...TCTCAGGCTGTGGATCTTTGTTACAGCTCTAGGAAACTGTAGAAATACAATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR CCA 90 bp GTTTTGCTTACGAGCAAAGCCCTAATTAGATTCTGGCCTGAAACTTTTGGCAGAATGTCCGAAGAGCTGTaGGACACGTGGAGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: VLLTSKALIRFWPETFGRMSEEL*DTWRKD
Trigger: GTCCTTCCTCCACGTGTCCCACAGCTCTTCGGACAT...TCTGCCAAAAGTTTCAGGCCAGAATCTAATTAGGGCTTTGCTCGTAAGCAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR CCA 90 bp AGTGTGTTCACTTTTGAATGGAAGGCTCTACTGATATGGCTGGTATTTGACTTCCCTCGGGGGACTTCATaGAGGCGATGGCTGCGATTT +
Preference number: 4 (lower is better)
Translates to: SVFTFEWKALLIWLVFDFPRGTS*RRWLRF
Trigger: AAATCGCAGCCATCGCCTCCATGAAGTCCCCCGAGG...GAAGTCAAATACCAGCCATATCAGTAGAGCCTTCCATTCAAAAGTGAACACACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR CCA 90 bp AGAAGCTCACAACACTTCAAGGAGACCTCACAACCTTCACAACTGCGTAAGCACCACGCTGCTCAGATATaGTTCAGCTACCAAGTGTGT +
Preference number: 4 (lower is better)
Translates to: RSSQHFKETSQPSQLRKHHAAQI*FSYQVC
Trigger: ACACACTTGGTAGCTGAACCATATCTGAGCAGCGTG...GTGCTTACGCAGTTGTGAAGGTTGTGAGGTCTCCTTGAAGTGTTGTGAGCTTCT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR CCA 90 bp CGTCAGGCTCACCACTTTATTCCACAGAAAACCCAGCCTGGTTCTATGTTCGGTCTAGAGACCATGGGGTaGAAAAGCTACATAGCATTG +
Preference number: 4 (lower is better)
Translates to: RQAHHFIPQKTQPGSMFGLETMG*KSYIAL
Trigger: CAATGCTATGTAGCTTTTCCACCCCATGGTCTCTAG...ACCGAACATAGAACCAGGCTGGGTTTTCTGTGGAATAAAGTGGTGAGCCTGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR TCA 90 bp GTTTTGCTTACGAGCAAAGCCCTAATTAGATTCTGGCCTGAAACTTTTGGCAGAGAGTGTTACCACTATTaGTGTGGCCGTCCTCACAGG +
Preference number: 4 (lower is better)
Translates to: VLLTSKALIRFWPETFGRECYHY*CGRPHR
Trigger: CCTGTGAGGACGGCCACATCAATAGTGGTAACACTC...TCTGCCAAAAGTTTCAGGCCAGAATCTAATTAGGGCTTTGCTCGTAAGCAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR TCA 90 bp ACGATTAACGTCAGGCTCACCACTTTATTCCACAGAAAACCCAGCCTGGTTCTAAACTGCAGGCAGAGCTaGGAGGGGAATGAGTATTTT +
Preference number: 4 (lower is better)
Translates to: TINVRLTTLFHRKPSLVLNCRQS*EGNEYF
Trigger: AAAATACTCATTCCCCTCTCAGCTCTGCCTGCAGTT...TAGAACCAGGCTGGGTTTTCTGTGGAATAAAGTGGTGAGCCTGACGTTAATCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR TCA 90 bp AGCATTGTATTTCTACAGTTTCCTAGAGCTGTAACAAAGATCCACAGCCTGAGAGTTCACAGTCTGAGCTaGTCATGCTTGCGCTGCGGA +
Preference number: 4 (lower is better)
Translates to: SIVFLQFPRAVTKIHSLRVHSLS*SCLRCG
Trigger: TCCGCAGCGCAAGCATGATCAGCTCAGACTGTGAAC...TCTCAGGCTGTGGATCTTTGTTACAGCTCTAGGAAACTGTAGAAATACAATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR TCA 90 bp CGTCAGGCTCACCACTTTATTCCACAGAAAACCCAGCCTGGTTCTATGTTCGGTCAAAGATCCACAGCCTaGGAGAATAACATATGCAAG +
Preference number: 4 (lower is better)
Translates to: RQAHHFIPQKTQPGSMFGQRSTA*ENNICK
Trigger: CTTGCATATGTTATTCTCTCAGGCTGTGGATCTTTG...ACCGAACATAGAACCAGGCTGGGTTTTCTGTGGAATAAAGTGGTGAGCCTGACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR GCA 90 bp CCACTTTATTCCACAGAAAACCCAGCCTGGTTCTATGTTCGGTCAGTCATTATCCACAACCTTCACAACTaGGTAAGCACAGAGACCCAC +
Preference number: 4 (lower is better)
Translates to: PLYSTENPAWFYVRSVIIHNLHN*VSTETH
Trigger: GTGGGTCTCTGTGCTTACGCAGTTGTGAAGGTTGTG...GATAATGACTGACCGAACATAGAACCAGGCTGGGTTTTCTGTGGAATAAAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR GCA 90 bp AGAAGCTCACAACACTTCAAGGAGACCTCACAACCTTCACAACTGCGTAAGCACTGTTACCCCAATGACTaGTTCACTAAGTGGCAAGAG +
Preference number: 4 (lower is better)
Translates to: RSSQHFKETSQPSQLRKHCYPND*FTKWQE
Trigger: CTCTTGCCACTTAGTGAAGCAGTCATTGGGGTAACA...GTGCTTACGCAGTTGTGAAGGTTGTGAGGTCTCCTTGAAGTGTTGTGAGCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR GCA 90 bp GACAACAGAATCACGCTGCTCAGATATGGTTCAGCTACCAAGTGTGTTCACTTTGTAGGTTTCCCTCTCTaGTGCCACATCATGGTGTCA +
Preference number: 4 (lower is better)
Translates to: DNRITLLRYGSATKCVHFVGFPL*CHIMVS
Trigger: TGACACCATGATGTGGCAGCAGAGAGGGAAACCTAC...AAAGTGAACACACTTGGTAGCTGAACCATATCTGAGCAGCGTGATTCTGTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR CCA 90 bp CCACTTTATTCCACAGAAAACCCAGCCTGGTTCTATGTTCGGTCAGTCATTATCTCAGCTGACATTTACTaGCCACCTCTCCTCTTGGGT +
Preference number: 4 (lower is better)
Translates to: PLYSTENPAWFYVRSVIISADIY*PPLLLG
Trigger: ACCCAAGAGGAGAGGTGGCCAGTAAATGTCAGCTGA...GATAATGACTGACCGAACATAGAACCAGGCTGGGTTTTCTGTGGAATAAAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR GCA 90 bp GTTTTGCTTACGAGCAAAGCCCTAATTAGATTCTGGCCTGAAACTTTTGGCAGATTTCGATGGCAGAAATaGCATACGGCACGCGGTCAT +
Preference number: 4 (lower is better)
Translates to: VLLTSKALIRFWPETFGRFRWQK*HTARGH
Trigger: ATGACCGCGTGCCGTATGGCATTTCTGCCATCGAAA...TCTGCCAAAAGTTTCAGGCCAGAATCTAATTAGGGCTTTGCTCGTAAGCAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR CCA 90 bp AGCATTGTATTTCTACAGTTTCCTAGAGCTGTAACAAAGATCCACAGCCTGAGAACTTCATGGAGGCGATaGCTGCGATTTTGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: SIVFLQFPRAVTKIHSLRTSWRR*LRFWAW
Trigger: CCAAGCCCAAAATCGCAGCCATCGCCTCCATGAAGT...TCTCAGGCTGTGGATCTTTGTTACAGCTCTAGGAAACTGTAGAAATACAATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR CCA 90 bp AGAAGCTCACAACACTTCAAGGAGACCTCACAACCTTCACAACTGCGTAAGCACAAGCAACACAAAGAGTaGAGAAGCTCACAACACTTC +
Preference number: 4 (lower is better)
Translates to: RSSQHFKETSQPSQLRKHKQHKE*RSSQHF
Trigger: GAAGTGTTGTGAGCTTCTCCACTCTTTGTGTTGCTT...GTGCTTACGCAGTTGTGAAGGTTGTGAGGTCTCCTTGAAGTGTTGTGAGCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR TCA 90 bp ACGATTAACGTCAGGCTCACCACTTTATTCCACAGAAAACCCAGCCTGGTTCTATGCAGCAGGAAATTGTaGGTGTTACCACTATTGATG +
Preference number: 4 (lower is better)
Translates to: TINVRLTTLFHRKPSLVLCSRKL*VLPLLM
Trigger: CATCAATAGTGGTAACACTCACAATTTCCTGCTGCA...TAGAACCAGGCTGGGTTTTCTGTGGAATAAAGTGGTGAGCCTGACGTTAATCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR TCA 90 bp AGCATTGTATTTCTACAGTTTCCTAGAGCTGTAACAAAGATCCACAGCCTGAGAAGACTGTTCACAGTCTaGGCTGATCATGCTTGCGCT +
Preference number: 4 (lower is better)
Translates to: SIVFLQFPRAVTKIHSLRRLFTV*ADHACA
Trigger: AGCGCAAGCATGATCAGCTCAGACTGTGAACAGTCT...TCTCAGGCTGTGGATCTTTGTTACAGCTCTAGGAAACTGTAGAAATACAATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR TCA 90 bp GACAACAGAATCACGCTGCTCAGATATGGTTCAGCTACCAAGTGTGTTCACTTTATGGGAGACCTTCTGTaGCTCTCTAGCTTGTTTGAT +
Preference number: 4 (lower is better)
Translates to: DNRITLLRYGSATKCVHFMGDLL*LSSLFD
Trigger: ATCAAACAAGCTAGAGAGTCACAGAAGGTCTCCCAT...AAAGTGAACACACTTGGTAGCTGAACCATATCTGAGCAGCGTGATTCTGTTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR GCA 90 bp ACGATTAACGTCAGGCTCACCACTTTATTCCACAGAAAACCCAGCCTGGTTCTAACAGAACAAGAATGCTaGTCTGGATGTCCAATTTGG +
Preference number: 4 (lower is better)
Translates to: TINVRLTTLFHRKPSLVLTEQEC*SGCPIW
Trigger: CCAAATTGGACATCCAGAGCAGCATTCTTGTTCTGT...TAGAACCAGGCTGGGTTTTCTGTGGAATAAAGTGGTGAGCCTGACGTTAATCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR CCA 90 bp ACGATTAACGTCAGGCTCACCACTTTATTCCACAGAAAACCCAGCCTGGTTCTACATTTACTGTCCCACTaGAATAGTCTCACATGTAGG +
Preference number: 4 (lower is better)
Translates to: TINVRLTTLFHRKPSLVLHLLSH*NSLTCR
Trigger: CCTACATGTGAGACTATTCCAGTGGGACAGTAAATG...TAGAACCAGGCTGGGTTTTCTGTGGAATAAAGTGGTGAGCCTGACGTTAATCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR TCA 90 bp GACAACAGAATCACGCTGCTCAGATATGGTTCAGCTACCAAGTGTGTTCACTTTAATGGAAGGCTCTACTaGTATGGCTGGTATTTGACT +
Preference number: 4 (lower is better)
Translates to: DNRITLLRYGSATKCVHFNGRLY*YGWYLT
Trigger: AGTCAAATACCAGCCATATCAGTAGAGCCTTCCATT...AAAGTGAACACACTTGGTAGCTGAACCATATCTGAGCAGCGTGATTCTGTTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR TCA 90 bp AGTGTGTTCACTTTTGAATGGAAGGCTCTACTGATATGGCTGGTATTTGACTTCATGTGGCAAAGGCAATaGGGCAAACCACTTGTAGGT +
Preference number: 4 (lower is better)
Translates to: SVFTFEWKALLIWLVFDFMWQRQ*GKPLVG
Trigger: ACCTACAAGTGGTTTGCCTCATTGCCTTTGCCACAT...GAAGTCAAATACCAGCCATATCAGTAGAGCCTTCCATTCAAAAGTGAACACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR GCA 90 bp CCACTTTATTCCACAGAAAACCCAGCCTGGTTCTATGTTCGGTCAGTCATTATCGTCAGAATTAGCCCTTaGAAAGTTTTCCATTCCCAG +
Preference number: 4 (lower is better)
Translates to: PLYSTENPAWFYVRSVIIVRISP*KVFHSQ
Trigger: CTGGGAATGGAAAACTTTGCAAGGGCTAATTCTGAC...GATAATGACTGACCGAACATAGAACCAGGCTGGGTTTTCTGTGGAATAAAGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR CCA 90 bp CCACTTTATTCCACAGAAAACCCAGCCTGGTTCTATGTTCGGTCAGTCATTATCGCCCTAATTAGATTCTaGCCTGAAACTTTTGGCAGA +
Preference number: 4 (lower is better)
Translates to: PLYSTENPAWFYVRSVIIALIRF*PETFGR
Trigger: TCTGCCAAAAGTTTCAGGCCAGAATCTAATTAGGGC...GATAATGACTGACCGAACATAGAACCAGGCTGGGTTTTCTGTGGAATAAAGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR TCA 90 bp AGCATTGTATTTCTACAGTTTCCTAGAGCTGTAACAAAGATCCACAGCCTGAGATTGCGCTGCGGAAGTTaGGGGATATTATGTCAGAAT +
Preference number: 4 (lower is better)
Translates to: SIVFLQFPRAVTKIHSLRLRCGS*GILCQN
Trigger: ATTCTGACATAATATCCCTCAACTTCCGCAGCGCAA...TCTCAGGCTGTGGATCTTTGTTACAGCTCTAGGAAACTGTAGAAATACAATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR GCA 90 bp GTTTTGCTTACGAGCAAAGCCCTAATTAGATTCTGGCCTGAAACTTTTGGCAGAACAACAGAATCACGCTaGTCAGATATGGTTCAGCTA +
Preference number: 4 (lower is better)
Translates to: VLLTSKALIRFWPETFGRTTESR*SDMVQL
Trigger: TAGCTGAACCATATCTGAGCAGCGTGATTCTGTTGT...TCTGCCAAAAGTTTCAGGCCAGAATCTAATTAGGGCTTTGCTCGTAAGCAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR CCA 90 bp GTTTTGCTTACGAGCAAAGCCCTAATTAGATTCTGGCCTGAAACTTTTGGCAGAGGAATGAGTATTTTATaGATGGTAGGCAGAGGTCAC +
Preference number: 4 (lower is better)
Translates to: VLLTSKALIRFWPETFGRGMSIL*MVGRGH
Trigger: GTGACCTCTGCCTACCATCCATAAAATACTCATTCC...TCTGCCAAAAGTTTCAGGCCAGAATCTAATTAGGGCTTTGCTCGTAAGCAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR CCA 90 bp GACAACAGAATCACGCTGCTCAGATATGGTTCAGCTACCAAGTGTGTTCACTTTGTGTTCACTTTTGAATaGAAGGCTCTACTGATATGG +
Preference number: 4 (lower is better)
Translates to: DNRITLLRYGSATKCVHFVFTFE*KALLIW
Trigger: CCATATCAGTAGAGCCTTCCATTCAAAAGTGAACAC...AAAGTGAACACACTTGGTAGCTGAACCATATCTGAGCAGCGTGATTCTGTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
3UTR CAA 72 bp CCAAACACCCAACCTCCTAGATTTAACCATCTTTCTTaGTATCTGATCGTCTTTCCTTGGGGTCAGTATTAC +
Preference number: 4 (lower is better)
Translates to: PNTQPPRFNHLS*YLIVFPWGQYY
Trigger: GTAATACTGACCCCAAGGAAAGACGATCAGATACAAAGAAAGATGGTTAAATCTAGGAGGTTGGGTGTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR TCA 90 bp GTTTTGCTTACGAGCAAAGCCCTAATTAGATTCTGGCCTGAAACTTTTGGCAGAGATATGGCTGGTATTTaGCTTCTGTTCATGTCTTCA +
Preference number: 4 (lower is better)
Translates to: VLLTSKALIRFWPETFGRDMAGI*LLFMSS
Trigger: TGAAGACATGAACAGAAGTCAAATACCAGCCATATC...TCTGCCAAAAGTTTCAGGCCAGAATCTAATTAGGGCTTTGCTCGTAAGCAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR GCA 90 bp AGTGTGTTCACTTTTGAATGGAAGGCTCTACTGATATGGCTGGTATTTGACTTCCAGAGGTCACAGGAATaGTGTCCTTTCTTAAAATGC +
Preference number: 4 (lower is better)
Translates to: SVFTFEWKALLIWLVFDFQRSQE*CPFLKC
Trigger: GCATTTTAAGAAAGGACAGCATTCCTGTGACCTCTG...GAAGTCAAATACCAGCCATATCAGTAGAGCCTTCCATTCAAAAGTGAACACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR CCA 90 bp GTTTTGCTTACGAGCAAAGCCCTAATTAGATTCTGGCCTGAAACTTTTGGCAGAACAAGAATGCTGCTCTaGATGTCCAATTTGGAGATT +
Preference number: 4 (lower is better)
Translates to: VLLTSKALIRFWPETFGRTRMLL*MSNLEI
Trigger: AATCTCCAAATTGGACATCCAGAGCAGCATTCTTGT...TCTGCCAAAAGTTTCAGGCCAGAATCTAATTAGGGCTTTGCTCGTAAGCAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR CCA 90 bp CCACTTTATTCCACAGAAAACCCAGCCTGGTTCTATGTTCGGTCAGTCATTATCGTATTTGTTTTAGGGTaGTCATTCTGTCGAAAGATA +
Preference number: 4 (lower is better)
Translates to: PLYSTENPAWFYVRSVIIVFVLG*SFCRKI
Trigger: TATCTTTCGACAGAATGACCACCCTAAAACAAATAC...GATAATGACTGACCGAACATAGAACCAGGCTGGGTTTTCTGTGGAATAAAGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR CCA 90 bp AGCATTGTATTTCTACAGTTTCCTAGAGCTGTAACAAAGATCCACAGCCTGAGAAAGGCTCTACTGATATaGCTGGTATTTGACTTCTGT +
Preference number: 4 (lower is better)
Translates to: SIVFLQFPRAVTKIHSLRKALLI*LVFDFC
Trigger: ACAGAAGTCAAATACCAGCCATATCAGTAGAGCCTT...TCTCAGGCTGTGGATCTTTGTTACAGCTCTAGGAAACTGTAGAAATACAATGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS CCA 90 bp TTCACGGTCGCCGCCGCGGGGCCGCGGGTAGAGAGCAGACGGGGCTaGCGGAACGGGCCCAGGACGCGCGGCCGCGAAGGGCCCGGCTGG +
Preference number: 5 (lower is better)
Translates to: FTVAAAGPRVESRRG*RNGPRTRGREGPGW
Trigger: CCAGCCGGGCCCTTCGCGGCCGCGCGTCCTGGGCCCGTTCCGCCAGCCCCGTCTGCTCTCTACCCGCGGCCCCGCGGCGGCGACCGTGAA
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361488.7
ENST00000519262.5
ENST00000520369.5
CDS CCA 90 bp GGCTGGCGGAACGGGCCCAGGACGCGCGGCCGCGAAGGGCCCGGCTaGCGGCGGCCGCGATGGTTCGGTCTGCACCGAGTGGGAGGGCTC +
Preference number: 5 (lower is better)
Translates to: GWRNGPRTRGREGPG*RRPRWFGLHRVGGL
Trigger: GAGCCCTCCCACTCGGTGCAGACCGAACCATCGCGGCCGCCGCCAGCCGGGCCCTTCGCGGCCGCGCGTCCTGGGCCCGTTCCGCCAGCC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519262.5
CDS GCA 90 bp GGGACACGTGGAGGAAGGACTCGGCTGACTGCTCCAGCAGTCTCCTaGCCACGTGGGAGCCGCCCTCCTGCGGGCTCCTGCGGCCCTGCG +
Preference number: 5 (lower is better)
Translates to: GTRGGRTRLTAPAVS*PRGSRPPAGSCGPA
Trigger: CGCAGGGCCGCAGGAGCCCGCAGGAGGGCGGCTCCCACGTGGGCAGGAGACTGCTGGAGCAGTCAGCCGAGTCCTTCCTCCACGTGTCCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS CCA 90 bp TGCCCACGTGGGAGCCGCCCTCCTGCGGGCTCCTGCGGCCCTGCGTaGGGTAGACCTTCAGGGACTCCGCGAAGGAGTGACGGTGCAGGT +
Preference number: 5 (lower is better)
Translates to: CPRGSRPPAGSCGPA*GRPSGTPRRSDGAG
Trigger: ACCTGCACCGTCACTCCTTCGCGGAGTCCCTGAAGGTCTACCCCACGCAGGGCCGCAGGAGCCCGCAGGAGGGCGGCTCCCACGTGGGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS TCA 90 bp CCCTCTGCACGCCGCTCTCGGTCTTGGCGTGGTTGCCGAACACTTTaGGCGTGGGGCTGCCCAGTGCGCGCTTGGCAGCCGGGCACACCG +
Preference number: 5 (lower is better)
Translates to: PSARRSRSWRGCRTL*AWGCPVRAWQPGTP
Trigger: CGGTGTGCCCGGCTGCCAAGCGCGCACTGGGCAGCCCCACGCTCAAAGTGTTCGGCAACCACGCCAAGACCGAGAGCGGCGTGCAGAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS TCA 90 bp GCGGATGTCCGAAGAGCTGTGGGACACGTGGAGGAAGGACTCGGCTaGCTGCTCCAGCAGTCTCCTGCCCACGTGGGAGCCGCCCTCCTG +
Preference number: 5 (lower is better)
Translates to: ADVRRAVGHVEEGLG*LLQQSPAHVGAALL
Trigger: CAGGAGGGCGGCTCCCACGTGGGCAGGAGACTGCTGGAGCAGTCAGCCGAGTCCTTCCTCCACGTGTCCCACAGCTCTTCGGACATCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS GCA 90 bp ATGTCCGAAGAGCTGTGGGACACGTGGAGGAAGGACTCGGCTGACTaGTCCAGCAGTCTCCTGCCCACGTGGGAGCCGCCCTCCTGCGGG +
Preference number: 5 (lower is better)
Translates to: MSEELWDTWRKDSAD*SSSLLPTWEPPSCG
Trigger: CCCGCAGGAGGGCGGCTCCCACGTGGGCAGGAGACTGCTGGAGCAGTCAGCCGAGTCCTTCCTCCACGTGTCCCACAGCTCTTCGGACAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS GCA 90 bp GTGGCTTCCGACCGGTGGGGCGGCCAGTTGCGGGAGCTGTGCTTGTaGCCCGAGCCCGAGCTAGAGCCCTCGGAGCTATTGATGATGTTC +
Preference number: 5 (lower is better)
Translates to: VASDRWGGQLRELCL*PEPELEPSELLMMF
Trigger: GAACATCATCAATAGCTCCGAGGGCTCTAGCTCGGGCTCGGGGCACAAGCACAGCTCCCGCAACTGGCCGCCCCACCGGTCGGAAGCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS CCA 90 bp GGTAGACCTTCAGGGACTCCGCGAAGGAGTGACGGTGCAGGTCAGTaGCTTCCGACCGGTGGGGCGGCCAGTTGCGGGAGCTGTGCTTGT +
Preference number: 5 (lower is better)
Translates to: GRPSGTPRRSDGAGQ*LPTGGAASCGSCAC
Trigger: ACAAGCACAGCTCCCGCAACTGGCCGCCCCACCGGTCGGAAGCCACTGACCTGCACCGTCACTCCTTCGCGGAGTCCCTGAAGGTCTACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS CCA 90 bp GGGTCTCCGTGGGCATGGTGGGCGGTCTTTCCCCGGCAGCCGTGTTaGATGCTCTTCTGGGCGCCTCCGCAAGGCCTGAATAGACACATG +
Preference number: 5 (lower is better)
Translates to: GSPWAWWAVFPRQPC*MLFWAPPQGLNRHM
Trigger: CATGTGTCTATTCAGGCCTTGCGGAGGCGCCCAGAAGAGCATCCAACACGGCTGCCGGGGAAAGACCGCCCACCATGCCCACGGAGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS CCA 90 bp CCGGCTTCACCATGCTACCTGTCTGTAGGGTCTCCGTGGGCATGGTaGGCGGTCTTTCCCCGGCAGCCGTGTTGGATGCTCTTCTGGGCG +
Preference number: 5 (lower is better)
Translates to: PASPCYLSVGSPWAW*AVFPRQPCWMLFWA
Trigger: CGCCCAGAAGAGCATCCAACACGGCTGCCGGGGAAAGACCGCCCACCATGCCCACGGAGACCCTACAGACAGGTAGCATGGTGAAGCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS CCA 90 bp TTCACGCTGGTCACCTTGCGGATGTCCGAAGAGCTGTGGGACACGTaGAGGAAGGACTCGGCTGACTGCTCCAGCAGTCTCCTGCCCACG +
Preference number: 5 (lower is better)
Translates to: FTLVTLRMSEELWDT*RKDSADCSSSLLPT
Trigger: CGTGGGCAGGAGACTGCTGGAGCAGTCAGCCGAGTCCTTCCTCCACGTGTCCCACAGCTCTTCGGACATCCGCAAGGTGACCAGCGTGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR CAA 90 bp GAGACCTCACAACCTTCACAACTGCGTAAGCACAGAGACCCACGCTCCCTCCTTCGGTGGGGCGGCCAGTaGCGGGAGCTGTGCTTGTGC +
Preference number: 5 (lower is better)
Translates to: ETSQPSQLRKHRDPRSLLRWGGQ*RELCLC
Trigger: GCACAAGCACAGCTCCCGCAACTGGCCGCCCCACCG...AAGGAGGGAGCGTGGGTCTCTGTGCTTACGCAGTTGTGAAGGTTGTGAGGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS CCA 90 bp GCATGGTGGGCGGTCTTTCCCCGGCAGCCGTGTTGGATGCTCTTCTaGGCGCCTCCGCAAGGCCTGAATAGACACATGTACATGAAGCGC +
Preference number: 5 (lower is better)
Translates to: AWWAVFPRQPCWMLF*APPQGLNRHMYMKR
Trigger: GCGCTTCATGTACATGTGTCTATTCAGGCCTTGCGGAGGCGCCCAGAAGAGCATCCAACACGGCTGCCGGGGAAAGACCGCCCACCATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS CCA 90 bp TTGAGGGGCTTCACGCTGGTCACCTTGCGGATGTCCGAAGAGCTGTaGGACACGTGGAGGAAGGACTCGGCTGACTGCTCCAGCAGTCTC +
Preference number: 5 (lower is better)
Translates to: LRGFTLVTLRMSEEL*DTWRKDSADCSSSL
Trigger: GAGACTGCTGGAGCAGTCAGCCGAGTCCTTCCTCCACGTGTCCCACAGCTCTTCGGACATCCGCAAGGTGACCAGCGTGAAGCCCCTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR CAA 90 bp AAACTTTTGGCAGATGACGCGTGTTCAGCCAGGCTCTGTAGCGATGGTGACGTGACGGCGCTGAGCCTCTaGGGGTTGGGCTCGGCCTGC +
Preference number: 5 (lower is better)
Translates to: KLLADDACSARLCSDGDVTALSL*GLGSAC
Trigger: GCAGGCCGAGCCCAACCCCAAGAGGCTCAGCGCCGT...CACGTCACCATCGCTACAGAGCCTGGCTGAACACGCGTCATCTGCCAAAAGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR CAA 90 bp CGTCAGGCTCACCACTTTATTCCACAGAAAACCCAGCCTGGTTCTATGTTCGGTGGGCACACCGGGGGCTaGGCCAGCACGGCGGGCTTC +
Preference number: 5 (lower is better)
Translates to: RQAHHFIPQKTQPGSMFGGHTGG*ASTAGF
Trigger: GAAGCCCGCCGTGCTGGCCAAGCCCCCGGTGTGCCC...ACCGAACATAGAACCAGGCTGGGTTTTCTGTGGAATAAAGTGGTGAGCCTGACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS GCA 90 bp CAACTGCAGGCAGAGCTCAGCTCCGCAAGTGCTGGCGATGGCAGATaGAAACCTCCTTCCAGCCAACAGGAGCCCCCGGCTTTCGTATCA +
Preference number: 5 (lower is better)
Translates to: QLQAELSSASAGDGR*KPPSSQQEPPAFVS
Trigger: TGATACGAAAGCCGGGGGCTCCTGTTGGCTGGAAGGAGGTTTGCATCTGCCATCGCCAGCACTTGCGGAGCTGAGCTCTGCCTGCAGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521413.1
ENST00000522059.5
CDS CCA 90 bp TTGTGTTCAACTGCAGGCAGAGCTCAGCTCCGCAAGTGCTGGCGATaGCAGATGCAAACCTCCTTCCAGCCAACAGGAGCCCCCGGCTTT +
Preference number: 5 (lower is better)
Translates to: LCSTAGRAQLRKCWR*QMQTSFQPTGAPGF
Trigger: AAAGCCGGGGGCTCCTGTTGGCTGGAAGGAGGTTTGCATCTGCCATCGCCAGCACTTGCGGAGCTGAGCTCTGCCTGCAGTTGAACACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521413.1
ENST00000522059.5
CDS-3UTR CAA 90 bp CTCACCACTTTATTCCACAGAAAACCCAGCCTGGTTCTATGTTCGGTCAGTCATCTGCCCAGTGCGCGCTaGGCAGCCGGGCACACCGGG +
Preference number: 5 (lower is better)
Translates to: LTTLFHRKPSLVLCSVSHLPSAR*AAGHTG
Trigger: CCCGGTGTGCCCGGCTGCCAAGCGCGCACTGGGCAG...ATGACTGACCGAACATAGAACCAGGCTGGGTTTTCTGTGGAATAAAGTGGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS TCA 90 bp CCTCTCCACGTCCGCGTCCACTCGGAAATATCTGTCACTCAAGTCTaGCTTAGACCGCTGGAGGGAGGGTCTTCGGCTGACTCCACAAGC +
Preference number: 5 (lower is better)
Translates to: PLHVRVHSEISVTQV*LRPLEGGSSADSTS
Trigger: GCTTGTGGAGTCAGCCGAAGACCCTCCCTCCAGCGGTCTAAGTCAGACTTGAGTGACAGATATTTCCGAGTGGACGCGGACGTGGAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR CAA 90 bp GAGACCTCACAACCTTCACAACTGCGTAAGCACAGAGACCCACGCTCCCTCCTTTTCACGGGCTCCTGCTaGGCGTTGATCACCTCCTGG +
Preference number: 5 (lower is better)
Translates to: ETSQPSQLRKHRDPRSLLFTGSC*ALITSW
Trigger: CCAGGAGGTGATCAACGCCAAGCAGGAGCCCGTGAA...AAGGAGGGAGCGTGGGTCTCTGTGCTTACGCAGTTGTGAAGGTTGTGAGGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS CCA 90 bp CCGGGCTGGTGCATCGCAGCCTTCGGTGCCTCAGCTGACATTTACTaGCCACCTCTCCTCTTGGGTAGGGACGCACCTTTTATTTCCTTT +
Preference number: 5 (lower is better)
Translates to: PGWCIAAFGASADIY*PPLLLGRDAPFISF
Trigger: AAAGGAAATAAAAGGTGCGTCCCTACCCAAGAGGAGAGGTGGCCAGTAAATGTCAGCTGAGGCACCGAAGGCTGCGATGCACCAGCCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS CCA 90 bp GCGTCCACTCGGAAATATCTGTCACTCAAGTCTGACTTAGACCGCTaGAGGGAGGGTCTTCGGCTGACTCCACAAGCTGGTTCCACAGGG +
Preference number: 5 (lower is better)
Translates to: ASTRKYLSLKSDLDR*REGLRLTPQAGSTG
Trigger: CCCTGTGGAACCAGCTTGTGGAGTCAGCCGAAGACCCTCCCTCCAGCGGTCTAAGTCAGACTTGAGTGACAGATATTTCCGAGTGGACGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR CAA 90 bp GAGACCTCACAACCTTCACAACTGCGTAAGCACAGAGACCCACGCTCCCTCCTTTCGGTCTTGGCGTGGTaGCCGAACACTTTGAGCGTG +
Preference number: 5 (lower is better)
Translates to: ETSQPSQLRKHRDPRSLLSVLAW*PNTLSV
Trigger: CACGCTCAAAGTGTTCGGCAACCACGCCAAGACCGA...AAGGAGGGAGCGTGGGTCTCTGTGCTTACGCAGTTGTGAAGGTTGTGAGGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS TCA 90 bp CCATTCCCAGGTTTTCCAGCTCTTCCGGGTCCAGTCCACAGTAGTTaGAGAACCTCTCCACGTCCGCGTCCACTCGGAAATATCTGTCAC +
Preference number: 5 (lower is better)
Translates to: PFPGFPALPGPVHSS*RTSPRPRPLGNICH
Trigger: GTGACAGATATTTCCGAGTGGACGCGGACGTGGAGAGGTTCTTCAACTACTGTGGACTGGACCCGGAAGAGCTGGAAAACCTGGGAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS GCA 90 bp CTATTGATGATGTTCTTCAGGATCTCCAGCTTCAGGTTCTCCCTCTaGACGCCGCTCTCGGTCTTGGCGTGGTTGCCGAACACTTTGAGC +
Preference number: 5 (lower is better)
Translates to: LLMMFFRISSFRFSL*TPLSVLAWLPNTLS
Trigger: GCTCAAAGTGTTCGGCAACCACGCCAAGACCGAGAGCGGCGTGCAGAGGGAGAACCTGAAGCTGGAGATCCTGAAGAACATCATCAATAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR CAA 90 bp TGTTTGGTAGCAGATCCCATTTACTGTCCCACTGGAATAGTCTCACATGTAGGCCTGCAGGGGATGGCCTaGAGGGGCTTCACGCTGGTC +
Preference number: 5 (lower is better)
Translates to: CLVADPIYCPTGIVSHVGLQGMA*RGFTLV
Trigger: GACCAGCGTGAAGCCCCTCAAGGCCATCCCCTGCAG...GCCTACATGTGAGACTATTCCAGTGGGACAGTAAATGGGATCTGCTACCAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR CAA 90 bp AGAAGCTCACAACACTTCAAGGAGACCTCACAACCTTCACAACTGCGTAAGCACGGCTCCTGCTTGGCGTaGATCACCTCCTGGCTCTTG +
Preference number: 5 (lower is better)
Translates to: RSSQHFKETSQPSQLRKHGSCLA*ITSWLL
Trigger: CAAGAGCCAGGAGGTGATCAACGCCAAGCAGGAGCC...GTGCTTACGCAGTTGTGAAGGTTGTGAGGTCTCCTTGAAGTGTTGTGAGCTTCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR CAA 90 bp TGTTTGGTAGCAGATCCCATTTACTGTCCCACTGGAATAGTCTCACATGTAGGCACGCCGCTCTCGGTCTaGGCGTGGTTGCCGAACACT +
Preference number: 5 (lower is better)
Translates to: CLVADPIYCPTGIVSHVGTPLSV*AWLPNT
Trigger: AGTGTTCGGCAACCACGCCAAGACCGAGAGCGGCGT...GCCTACATGTGAGACTATTCCAGTGGGACAGTAAATGGGATCTGCTACCAAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR CAA 90 bp TGTTTGGTAGCAGATCCCATTTACTGTCCCACTGGAATAGTCTCACATGTAGGCGCGATGGCTGCGATTTaGGGCTTGGGAGGCAGGGGA +
Preference number: 5 (lower is better)
Translates to: CLVADPIYCPTGIVSHVGAMAAI*GLGGRG
Trigger: TCCCCTGCCTCCCAAGCCCAAAATCGCAGCCATCGC...GCCTACATGTGAGACTATTCCAGTGGGACAGTAAATGGGATCTGCTACCAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS GCA 90 bp GCATCTTGGTTGTTTTTCAAGGGTGAAGGCTTTCAAGCTGGAGTCTaGAGAGCTGAGGATGTGGAGCATGTGGGAACGAAGGGTTCTGGG +
Preference number: 5 (lower is better)
Translates to: ASWLFFKGEGFQAGV*RAEDVEHVGTKGSG
Trigger: CCCAGAACCCTTCGTTCCCACATGCTCCACATCCTCAGCTCTGCAGACTCCAGCTTGAAAGCCTTCACCCTTGAAAAACAACCAAGATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000520369.5
ENST00000523486.5
CDS CCA 90 bp CTCTTTGCTGGATTTCAGCAAGCCAAGGCAGGAAGTACTTCCAGATaGTGGATCTCTGCAATCCTGCTGGTCTTCAGCTGCTCCTGCAGT +
Preference number: 5 (lower is better)
Translates to: LFAGFQQAKAGSTSR*WISAILLVFSCSCS
Trigger: ACTGCAGGAGCAGCTGAAGACCAGCAGGATTGCAGAGATCCACCATCTGGAAGTACTTCCTGCCTTGGCTTGCTGAAATCCAGCAAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520369.5
CDS-3UTR CAA 90 bp AGCATTGTATTTCTACAGTTTCCTAGAGCTGTAACAAAGATCCACAGCCTGAGATCCCCGGCAGCCGTGTaGGATGCTCTTCTGGGCGCC +
Preference number: 5 (lower is better)
Translates to: SIVFLQFPRAVTKIHSLRSPAAV*DALLGA
Trigger: GGCGCCCAGAAGAGCATCCAACACGGCTGCCGGGGA...TCTCAGGCTGTGGATCTTTGTTACAGCTCTAGGAAACTGTAGAAATACAATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS TCA 90 bp GCACCAGCAGGCTTTCATAGGTCTTCCCCTGTGTCTCACATCATTTaGCCAGTGGAATCACTGAGAATCCTCCACAGCCTCAAGGAACAG +
Preference number: 5 (lower is better)
Translates to: APAGFHRSSPVSHII*PVESLRILHSLKEQ
Trigger: CTGTTCCTTGAGGCTGTGGAGGATTCTCAGTGATTCCACTGGTCAAATGATGTGAGACACAGGGGAAGACCTATGAAAGCCTGCTGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520369.5
CDS-3UTR CAA 90 bp CTCACCACTTTATTCCACAGAAAACCCAGCCTGGTTCTATGTTCGGTCAGTCATTGGCCACCTCTCCTCTaGGGTAGGGACGCACCTTTT +
Preference number: 5 (lower is better)
Translates to: LTTLFHRKPSLVLCSVSHWPPLL*GRDAPF
Trigger: AAAAGGTGCGTCCCTACCCAAGAGGAGAGGTGGCCA...ATGACTGACCGAACATAGAACCAGGCTGGGTTTTCTGTGGAATAAAGTGGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR CAA 90 bp ACATTGCACAACAAGCAACACAAAGAGTGGAGAAGCTCACAACACTTCAAGGAGCCTTCCAGGCGGCCCTaGCACAAAAAGGCCACAAGC +
Preference number: 5 (lower is better)
Translates to: TLHNKQHKEWRSSQHFKEPSRRP*HKKATS
Trigger: GCTTGTGGCCTTTTTGTGCAAGGGCCGCCTGGAAGG...CTCCTTGAAGTGTTGTGAGCTTCTCCACTCTTTGTGTTGCTTGTTGTGCAATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR CAA 90 bp ACTTCAAGGAGACCTCACAACCTTCACAACTGCGTAAGCACAGAGACCCACGCTTCTGGCCTGAAACTTTaGGCAGATGACGCGTGTTCA +
Preference number: 5 (lower is better)
Translates to: TSRRPHNLHNCVSTETHASGLKL*ADDACS
Trigger: TGAACACGCGTCATCTGCCAAAAGTTTCAGGCCAGA...AGCGTGGGTCTCTGTGCTTACGCAGTTGTGAAGGTTGTGAGGTCTCCTTGAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS CCA 90 bp GCACAGAGACCCACGCTCCCTCCTTTCCACGCACTGTCTTACACATaGGAGACCTTCTGTGACTCTCTAGCTTGTTTGATGCTATATAAC +
Preference number: 5 (lower is better)
Translates to: AQRPTLPPFHALSYT*ETFCDSLACLMLYN
Trigger: GTTATATAGCATCAAACAAGCTAGAGAGTCACAGAAGGTCTCCCATGTGTAAGACAGTGCGTGGAAAGGAGGGAGCGTGGGTCTCTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS CCA 90 bp TTTGCTGGATTTCAGCAAGCCAAGGCAGGAAGTACTTCCAGATGGTaGATCTCTGCAATCCTGCTGGTCTTCAGCTGCTCCTGCAGTTTT +
Preference number: 5 (lower is better)
Translates to: FAGFQQAKAGSTSRW*ISAILLVFSCSCSF
Trigger: AAAACTGCAGGAGCAGCTGAAGACCAGCAGGATTGCAGAGATCCACCATCTGGAAGTACTTCCTGCCTTGGCTTGCTGAAATCCAGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520369.5
CDS-3UTR CAA 90 bp CCACTTTATTCCACAGAAAACCCAGCCTGGTTCTATGTTCGGTCAGTCATTATCTTCACGCTGGTCACCTaGCGGATGTCCGAAGAGCTG +
Preference number: 5 (lower is better)
Translates to: PLYSTENPAWFYVRSVIIFTLVT*RMSEEL
Trigger: CAGCTCTTCGGACATCCGCAAGGTGACCAGCGTGAA...GATAATGACTGACCGAACATAGAACCAGGCTGGGTTTTCTGTGGAATAAAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR CAA 90 bp GAGACCTCACAACCTTCACAACTGCGTAAGCACAGAGACCCACGCTCCCTCCTTGACTCTCTAGCTTGTTaGATGCTATATAACCACTTG +
Preference number: 5 (lower is better)
Translates to: ETSQPSQLRKHRDPRSLLDSLAC*MLYNHL
Trigger: CAAGTGGTTATATAGCATCAAACAAGCTAGAGAGTC...AAGGAGGGAGCGTGGGTCTCTGTGCTTACGCAGTTGTGAAGGTTGTGAGGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS TCA 90 bp ATGGCATCCCCAGTACTACAACAATCAGGTGATGGCAACTGCTTATaGACATGGGGAGATGGAGATCTAGGTGGGTATGCGAAACTCCTT +
Preference number: 5 (lower is better)
Translates to: MASPVLQQSGDGNCL*TWGDGDLGGYAKLL
Trigger: AAGGAGTTTCGCATACCCACCTAGATCTCCATCTCCCCATGTTCATAAGCAGTTGCCATCACCTGATTGTTGTAGTACTGGGGATGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520369.5
CDS CCA 90 bp TGTAATGCTAGGGCCACATCTCCAGTAGCTGTGGTTCCAGTGTACTaGGATAACCCAGGACTGACTCACAGAATCTTAGCAGGTTTTATC +
Preference number: 5 (lower is better)
Translates to: CNARATSPVAVVPVY*DNPGLTHRILAGFI
Trigger: GATAAAACCTGCTAAGATTCTGTGAGTCAGTCCTGGGTTATCCCAGTACACTGGAACCACAGCTACTGGAGATGTGGCCCTAGCATTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520369.5
CDS-3UTR CAA 90 bp ACATTGCACAACAAGCAACACAAAGAGTGGAGAAGCTCACAACACTTCAAGGAGGTCTCCTCCAGGTCTTaGTGTTCAACTGCAGGCAGA +
Preference number: 5 (lower is better)
Translates to: TLHNKQHKEWRSSQHFKEVSSRS*CSTAGR
Trigger: TCTGCCTGCAGTTGAACACAAAGACCTGGAGGAGAC...CTCCTTGAAGTGTTGTGAGCTTCTCCACTCTTTGTGTTGCTTGTTGTGCAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR CAA 90 bp ACTTCAAGGAGACCTCACAACCTTCACAACTGCGTAAGCACAGAGACCCACGCTTCTGATCGTCTTTCCTaGGGGTCAGTATTACATAGA +
Preference number: 5 (lower is better)
Translates to: TSRRPHNLHNCVSTETHASDRLS*GSVLHR
Trigger: TCTATGTAATACTGACCCCAAGGAAAGACGATCAGA...AGCGTGGGTCTCTGTGCTTACGCAGTTGTGAAGGTTGTGAGGTCTCCTTGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS GCA 90 bp ATTTCAGCAAGCCAAGGCAGGAAGTACTTCCAGATGGTGGATCTCTaGAATCCTGCTGGTCTTCAGCTGCTCCTGCAGTTTTTAACTTTA +
Preference number: 5 (lower is better)
Translates to: ISASQGRKYFQMVDL*NPAGLQLLLQFLTL
Trigger: TAAAGTTAAAAACTGCAGGAGCAGCTGAAGACCAGCAGGATTGCAGAGATCCACCATCTGGAAGTACTTCCTGCCTTGGCTTGCTGAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520369.5
CDS-3UTR CAA 90 bp TGTTTGGTAGCAGATCCCATTTACTGTCCCACTGGAATAGTCTCACATGTAGGCAGGTCAGTCCCCATGTaGACAAGCATGCAACTTGAA +
Preference number: 5 (lower is better)
Translates to: CLVADPIYCPTGIVSHVGRSVPM*TSMQLE
Trigger: TTCAAGTTGCATGCTTGTCAACATGGGGACTGACCT...GCCTACATGTGAGACTATTCCAGTGGGACAGTAAATGGGATCTGCTACCAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR CAA 90 bp ACATTGCACAACAAGCAACACAAAGAGTGGAGAAGCTCACAACACTTCAAGGAGCTTGCGCTGCGGAAGTaGAGGGATATTATGTCAGAA +
Preference number: 5 (lower is better)
Translates to: TLHNKQHKEWRSSQHFKELALRK*RDIMSE
Trigger: TTCTGACATAATATCCCTCAACTTCCGCAGCGCAAG...CTCCTTGAAGTGTTGTGAGCTTCTCCACTCTTTGTGTTGCTTGTTGTGCAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR CAA 90 bp AGCATTGTATTTCTACAGTTTCCTAGAGCTGTAACAAAGATCCACAGCCTGAGAGAGCCCTCGGAGCTATaGATGATGTTCTTCAGGATC +
Preference number: 5 (lower is better)
Translates to: SIVFLQFPRAVTKIHSLREPSEL*MMFFRI
Trigger: GATCCTGAAGAACATCATCAATAGCTCCGAGGGCTC...TCTCAGGCTGTGGATCTTTGTTACAGCTCTAGGAAACTGTAGAAATACAATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR CAA 90 bp AGCATTGTATTTCTACAGTTTCCTAGAGCTGTAACAAAGATCCACAGCCTGAGATACGGCACGCGGTCATaGGCACTGTCATCATTTCTA +
Preference number: 5 (lower is better)
Translates to: SIVFLQFPRAVTKIHSLRYGTRS*ALSSFL
Trigger: TAGAAATGATGACAGTGCCAATGACCGCGTGCCGTA...TCTCAGGCTGTGGATCTTTGTTACAGCTCTAGGAAACTGTAGAAATACAATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS TCA 90 bp CACTGTTTCTTGCAGAGATCATCACAGAGTCCCGAGGAGACATGGTaGATTCTGTCTTTATATTTCTTCCCCAGAATATTACAGATATCC +
Preference number: 5 (lower is better)
Translates to: HCFLQRSSQSPEETW*ILSLYFFPRILQIS
Trigger: GGATATCTGTAATATTCTGGGGAAGAAATATAAAGACAGAATTCACCATGTCTCCTCGGGACTCTGTGATGATCTCTGCAAGAAACAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520369.5
CDS-3UTR CAA 90 bp GACAACAGAATCACGCTGCTCAGATATGGTTCAGCTACCAAGTGTGTTCACTTTCAGGACTTACAGAGCTaGATAGTTTCTAATTCAAGA +
Preference number: 5 (lower is better)
Translates to: DNRITLLRYGSATKCVHFQDLQS*IVSNSR
Trigger: TCTTGAATTAGAAACTATCAAGCTCTGTAAGTCCTG...AAAGTGAACACACTTGGTAGCTGAACCATATCTGAGCAGCGTGATTCTGTTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS-3UTR CAA 90 bp ACATTGCACAACAAGCAACACAAAGAGTGGAGAAGCTCACAACACTTCAAGGAGTGCAACTTGAAAACATaGCACAACAAGCAACACAAA +
Preference number: 5 (lower is better)
Translates to: TLHNKQHKEWRSSQHFKECNLKT*HNKQHK
Trigger: TTTGTGTTGCTTGTTGTGCAATGTTTTCAAGTTGCA...CTCCTTGAAGTGTTGTGAGCTTCTCCACTCTTTGTGTTGCTTGTTGTGCAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS CCA 72 bp AACGGGCCCAGGACGCGCGGCCGCGAAGGGCCCGGCTaGCGGCGGCCGCGATGGTTCGGTCTGCACCGAGTG +
Preference number: 6 (lower is better)
Translates to: NGPRTRGREGPG*RRPRWFGLHRV
Trigger: CACTCGGTGCAGACCGAACCATCGCGGCCGCCGCCAGCCGGGCCCTTCGCGGCCGCGCGTCCTGGGCCCGTT
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519262.5
CDS GCA 72 bp AAGGGCCCGGCTGGCGGCGGCCGCGATGGTTCGGTCTaGACCGAGTGGGAGGGCTCAGGCAGGCTTCGCCGG +
Preference number: 6 (lower is better)
Translates to: KGPAGGGRDGSV*TEWEGSGRLRR
Trigger: CCGGCGAAGCCTGCCTGAGCCCTCCCACTCGGTGCAGACCGAACCATCGCGGCCGCCGCCAGCCGGGCCCTT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519262.5
CDS CCA 72 bp GACTCGGCTGACTGCTCCAGCAGTCTCCTGCCCACGTaGGAGCCGCCCTCCTGCGGGCTCCTGCGGCCCTGC +
Preference number: 6 (lower is better)
Translates to: DSADCSSSLLPT*EPPSCGLLRPC
Trigger: GCAGGGCCGCAGGAGCCCGCAGGAGGGCGGCTCCCACGTGGGCAGGAGACTGCTGGAGCAGTCAGCCGAGTC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS CAA 90 bp GTGGGGCTGCCCAGTGCGCGCTTGGCAGCCGGGCACACCGGGGGCTaGGCCAGCACGGCGGGCTTCACGGGCTCCTGCTTGGCGTTGATC +
Preference number: 6 (lower is better)
Translates to: VGLPSARLAAGHTGG*ASTAGFTGSCLALI
Trigger: GATCAACGCCAAGCAGGAGCCCGTGAAGCCCGCCGTGCTGGCCAAGCCCCCGGTGTGCCCGGCTGCCAAGCGCGCACTGGGCAGCCCCAC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS CCA 72 bp GGGAGCCGCCCTCCTGCGGGCTCCTGCGGCCCTGCGTaGGGTAGACCTTCAGGGACTCCGCGAAGGAGTGAC +
Preference number: 6 (lower is better)
Translates to: GSRPPAGSCGPA*GRPSGTPRRSD
Trigger: GTCACTCCTTCGCGGAGTCCCTGAAGGTCTACCCCACGCAGGGCCGCAGGAGCCCGCAGGAGGGCGGCTCCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS GCA 72 bp GGAGGAAGGACTCGGCTGACTGCTCCAGCAGTCTCCTaGCCACGTGGGAGCCGCCCTCCTGCGGGCTCCTGC +
Preference number: 6 (lower is better)
Translates to: GGRTRLTAPAVS*PRGSRPPAGSC
Trigger: GCAGGAGCCCGCAGGAGGGCGGCTCCCACGTGGGCAGGAGACTGCTGGAGCAGTCAGCCGAGTCCTTCCTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS CAA 90 bp TCCCTCTGCACGCCGCTCTCGGTCTTGGCGTGGTTGCCGAACACTTaGAGCGTGGGGCTGCCCAGTGCGCGCTTGGCAGCCGGGCACACC +
Preference number: 6 (lower is better)
Translates to: SLCTPLSVLAWLPNT*SVGLPSARLAAGHT
Trigger: GGTGTGCCCGGCTGCCAAGCGCGCACTGGGCAGCCCCACGCTCAAAGTGTTCGGCAACCACGCCAAGACCGAGAGCGGCGTGCAGAGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS TCA 72 bp CGCCGCTCTCGGTCTTGGCGTGGTTGCCGAACACTTTaGGCGTGGGGCTGCCCAGTGCGCGCTTGGCAGCCG +
Preference number: 6 (lower is better)
Translates to: RRSRSWRGCRTL*AWGCPVRAWQP
Trigger: CGGCTGCCAAGCGCGCACTGGGCAGCCCCACGCTCAAAGTGTTCGGCAACCACGCCAAGACCGAGAGCGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS GCA 72 bp GACCGGTGGGGCGGCCAGTTGCGGGAGCTGTGCTTGTaGCCCGAGCCCGAGCTAGAGCCCTCGGAGCTATTG +
Preference number: 6 (lower is better)
Translates to: DRWGGQLRELCL*PEPELEPSELL
Trigger: CAATAGCTCCGAGGGCTCTAGCTCGGGCTCGGGGCACAAGCACAGCTCCCGCAACTGGCCGCCCCACCGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS CCA 72 bp TCAGGGACTCCGCGAAGGAGTGACGGTGCAGGTCAGTaGCTTCCGACCGGTGGGGCGGCCAGTTGCGGGAGC +
Preference number: 6 (lower is better)
Translates to: SGTPRRSDGAGQ*LPTGGAASCGS
Trigger: GCTCCCGCAACTGGCCGCCCCACCGGTCGGAAGCCACTGACCTGCACCGTCACTCCTTCGCGGAGTCCCTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS CAA 72 bp TGCAGGTCAGTGGCTTCCGACCGGTGGGGCGGCCAGTaGCGGGAGCTGTGCTTGTGCCCCGAGCCCGAGCTA +
Preference number: 6 (lower is better)
Translates to: CRSVASDRWGGQ*RELCLCPEPEL
Trigger: TAGCTCGGGCTCGGGGCACAAGCACAGCTCCCGCAACTGGCCGCCCCACCGGTCGGAAGCCACTGACCTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS GCA 72 bp GAGCTGTGGGACACGTGGAGGAAGGACTCGGCTGACTaGTCCAGCAGTCTCCTGCCCACGTGGGAGCCGCCC +
Preference number: 6 (lower is better)
Translates to: ELWDTWRKDSAD*SSSLLPTWEPP
Trigger: GGGCGGCTCCCACGTGGGCAGGAGACTGCTGGAGCAGTCAGCCGAGTCCTTCCTCCACGTGTCCCACAGCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS CAA 72 bp GTGGGCATGGTGGGCGGTCTTTCCCCGGCAGCCGTGTaGGATGCTCTTCTGGGCGCCTCCGCAAGGCCTGAA +
Preference number: 6 (lower is better)
Translates to: VGMVGGLSPAAV*DALLGASARPE
Trigger: TTCAGGCCTTGCGGAGGCGCCCAGAAGAGCATCCAACACGGCTGCCGGGGAAAGACCGCCCACCATGCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS CAA 90 bp TCAGTGGCTTCCGACCGGTGGGGCGGCCAGTTGCGGGAGCTGTGCTaGTGCCCCGAGCCCGAGCTAGAGCCCTCGGAGCTATTGATGATG +
Preference number: 6 (lower is better)
Translates to: SVASDRWGGQLRELC*CPEPELEPSELLMM
Trigger: CATCATCAATAGCTCCGAGGGCTCTAGCTCGGGCTCGGGGCACAAGCACAGCTCCCGCAACTGGCCGCCCCACCGGTCGGAAGCCACTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS CCA 72 bp TGGGCATGGTGGGCGGTCTTTCCCCGGCAGCCGTGTTaGATGCTCTTCTGGGCGCCTCCGCAAGGCCTGAAT +
Preference number: 6 (lower is better)
Translates to: WAWWAVFPRQPC*MLFWAPPQGLN
Trigger: ATTCAGGCCTTGCGGAGGCGCCCAGAAGAGCATCCAACACGGCTGCCGGGGAAAGACCGCCCACCATGCCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS CCA 72 bp CCGGCTTCACCATGCTACCTGTCTGTAGGGTCTCCGTaGGCATGGTGGGCGGTCTTTCCCCGGCAGCCGTGT +
Preference number: 6 (lower is better)
Translates to: PASPCYLSVGSP*AWWAVFPRQPC
Trigger: ACACGGCTGCCGGGGAAAGACCGCCCACCATGCCCACGGAGACCCTACAGACAGGTAGCATGGTGAAGCCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS CCA 72 bp CCGCTGGAGGGAGGGTCTTCGGCTGACTCCACAAGCTaGTTCCACAGGGTCGGCCTCGGGGGACTTCATGGA +
Preference number: 6 (lower is better)
Translates to: PLEGGSSADSTS*FHRVGLGGLHG
Trigger: TCCATGAAGTCCCCCGAGGCCGACCCTGTGGAACCAGCTTGTGGAGTCAGCCGAAGACCCTCCCTCCAGCGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS CAA 90 bp AGCTTCAGGTTCTCCCTCTGCACGCCGCTCTCGGTCTTGGCGTGGTaGCCGAACACTTTGAGCGTGGGGCTGCCCAGTGCGCGCTTGGCA +
Preference number: 6 (lower is better)
Translates to: SFRFSLCTPLSVLAW*PNTLSVGLPSARLA
Trigger: TGCCAAGCGCGCACTGGGCAGCCCCACGCTCAAAGTGTTCGGCAACCACGCCAAGACCGAGAGCGGCGTGCAGAGGGAGAACCTGAAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS GCA 72 bp GCAGAGCTCAGCTCCGCAAGTGCTGGCGATGGCAGATaGAAACCTCCTTCCAGCCAACAGGAGCCCCCGGCT +
Preference number: 6 (lower is better)
Translates to: AELSSASAGDGR*KPPSSQQEPPA
Trigger: AGCCGGGGGCTCCTGTTGGCTGGAAGGAGGTTTGCATCTGCCATCGCCAGCACTTGCGGAGCTGAGCTCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521413.1
ENST00000522059.5
CDS CCA 72 bp CCATGCTACCTGTCTGTAGGGTCTCCGTGGGCATGGTaGGCGGTCTTTCCCCGGCAGCCGTGTTGGATGCTC +
Preference number: 6 (lower is better)
Translates to: PCYLSVGSPWAW*AVFPRQPCWML
Trigger: GAGCATCCAACACGGCTGCCGGGGAAAGACCGCCCACCATGCCCACGGAGACCCTACAGACAGGTAGCATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS CAA 72 bp CAGGGGATGGCCTTGAGGGGCTTCACGCTGGTCACCTaGCGGATGTCCGAAGAGCTGTGGGACACGTGGAGG +
Preference number: 6 (lower is better)
Translates to: QGMALRGFTLVT*RMSEELWDTWR
Trigger: CCTCCACGTGTCCCACAGCTCTTCGGACATCCGCAAGGTGACCAGCGTGAAGCCCCTCAAGGCCATCCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS CAA 90 bp GAGCTACTGCAGGGGATGGCCTTGAGGGGCTTCACGCTGGTCACCTaGCGGATGTCCGAAGAGCTGTGGGACACGTGGAGGAAGGACTCG +
Preference number: 6 (lower is better)
Translates to: ELLQGMALRGFTLVT*RMSEELWDTWRKDS
Trigger: CGAGTCCTTCCTCCACGTGTCCCACAGCTCTTCGGACATCCGCAAGGTGACCAGCGTGAAGCCCCTCAAGGCCATCCCCTGCAGTAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS CCA 72 bp TCACCATGCTACCTGTCTGTAGGGTCTCCGTGGGCATaGTGGGCGGTCTTTCCCCGGCAGCCGTGTTGGATG +
Preference number: 6 (lower is better)
Translates to: SPCYLSVGSPWA*WAVFPRQPCWM
Trigger: CATCCAACACGGCTGCCGGGGAAAGACCGCCCACCATGCCCACGGAGACCCTACAGACAGGTAGCATGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS CCA 72 bp AAGCTGGTTCCACAGGGTCGGCCTCGGGGGACTTCATaGAGGCGATGGCTGCGATTTTGGGCTTGGGAGGCA +
Preference number: 6 (lower is better)
Translates to: KLVPQGRPRGTS*RRWLRFWAWEA
Trigger: TGCCTCCCAAGCCCAAAATCGCAGCCATCGCCTCCATGAAGTCCCCCGAGGCCGACCCTGTGGAACCAGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS CAA 72 bp AGCTTCAGGTTCTCCCTCTGCACGCCGCTCTCGGTCTaGGCGTGGTTGCCGAACACTTTGAGCGTGGGGCTG +
Preference number: 6 (lower is better)
Translates to: SFRFSLCTPLSV*AWLPNTLSVGL
Trigger: CAGCCCCACGCTCAAAGTGTTCGGCAACCACGCCAAGACCGAGAGCGGCGTGCAGAGGGAGAACCTGAAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS CCA 72 bp GCGGTCTTTCCCCGGCAGCCGTGTTGGATGCTCTTCTaGGCGCCTCCGCAAGGCCTGAATAGACACATGTAC +
Preference number: 6 (lower is better)
Translates to: AVFPRQPCWMLF*APPQGLNRHMY
Trigger: GTACATGTGTCTATTCAGGCCTTGCGGAGGCGCCCAGAAGAGCATCCAACACGGCTGCCGGGGAAAGACCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS CCA 72 bp GTCACCTTGCGGATGTCCGAAGAGCTGTGGGACACGTaGAGGAAGGACTCGGCTGACTGCTCCAGCAGTCTC +
Preference number: 6 (lower is better)
Translates to: VTLRMSEELWDT*RKDSADCSSSL
Trigger: GAGACTGCTGGAGCAGTCAGCCGAGTCCTTCCTCCACGTGTCCCACAGCTCTTCGGACATCCGCAAGGTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS CCA 72 bp TTCACGCTGGTCACCTTGCGGATGTCCGAAGAGCTGTaGGACACGTGGAGGAAGGACTCGGCTGACTGCTCC +
Preference number: 6 (lower is better)
Translates to: FTLVTLRMSEEL*DTWRKDSADCS
Trigger: GGAGCAGTCAGCCGAGTCCTTCCTCCACGTGTCCCACAGCTCTTCGGACATCCGCAAGGTGACCAGCGTGAA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS CCA 72 bp ACTGCAGGCAGAGCTCAGCTCCGCAAGTGCTGGCGATaGCAGATGCAAACCTCCTTCCAGCCAACAGGAGCC +
Preference number: 6 (lower is better)
Translates to: TAGRAQLRKCWR*QMQTSFQPTGA
Trigger: GGCTCCTGTTGGCTGGAAGGAGGTTTGCATCTGCCATCGCCAGCACTTGCGGAGCTGAGCTCTGCCTGCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521413.1
ENST00000522059.5
CDS CAA 90 bp GAGCTGTGCTTGTGCCCCGAGCCCGAGCTAGAGCCCTCGGAGCTATaGATGATGTTCTTCAGGATCTCCAGCTTCAGGTTCTCCCTCTGC +
Preference number: 6 (lower is better)
Translates to: ELCLCPEPELEPSEL*MMFFRISSFRFSLC
Trigger: GCAGAGGGAGAACCTGAAGCTGGAGATCCTGAAGAACATCATCAATAGCTCCGAGGGCTCTAGCTCGGGCTCGGGGCACAAGCACAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS CAA 90 bp CCTCCTTTCTTCTCCCTGAAGGAGGTGGGAGTCTCCTCCAGGTCTTaGTGTTCAACTGCAGGCAGAGCTCAGCTCCGCAAGTGCTGGCGA +
Preference number: 6 (lower is better)
Translates to: PPFFSLKEVGVSSRS*CSTAGRAQLRKCWR
Trigger: TCGCCAGCACTTGCGGAGCTGAGCTCTGCCTGCAGTTGAACACAAAGACCTGGAGGAGACTCCCACCTCCTTCAGGGAGAAGAAAGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521413.1
ENST00000522059.5
CDS GCA 72 bp ATGTTCTTCAGGATCTCCAGCTTCAGGTTCTCCCTCTaGACGCCGCTCTCGGTCTTGGCGTGGTTGCCGAAC +
Preference number: 6 (lower is better)
Translates to: MFFRISSFRFSL*TPLSVLAWLPN
Trigger: GTTCGGCAACCACGCCAAGACCGAGAGCGGCGTGCAGAGGGAGAACCTGAAGCTGGAGATCCTGAAGAACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS TCA 72 bp CTCTCTGCAGCAGGAAATTGTGAGTGTTACCACTATTaGTGTGGCCGTCCTCACAGGGCACCGGGCTGGTGC +
Preference number: 6 (lower is better)
Translates to: LSAAGNCECYHY*CGRPHRAPGWC
Trigger: GCACCAGCCCGGTGCCCTGTGAGGACGGCCACATCAATAGTGGTAACACTCACAATTTCCTGCTGCAGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS TCA 72 bp GTCCGCGTCCACTCGGAAATATCTGTCACTCAAGTCTaGCTTAGACCGCTGGAGGGAGGGTCTTCGGCTGAC +
Preference number: 6 (lower is better)
Translates to: VRVHSEISVTQV*LRPLEGGSSAD
Trigger: GTCAGCCGAAGACCCTCCCTCCAGCGGTCTAAGTCAGACTTGAGTGACAGATATTTCCGAGTGGACGCGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS CCA 72 bp TGTTCAACTGCAGGCAGAGCTCAGCTCCGCAAGTGCTaGCGATGGCAGATGCAAACCTCCTTCCAGCCAACA +
Preference number: 6 (lower is better)
Translates to: CSTAGRAQLRKC*RWQMQTSFQPT
Trigger: TGTTGGCTGGAAGGAGGTTTGCATCTGCCATCGCCAGCACTTGCGGAGCTGAGCTCTGCCTGCAGTTGAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521413.1
ENST00000522059.5
CDS TCA 72 bp GGTTTTCCAGCTCTTCCGGGTCCAGTCCACAGTAGTTaGAGAACCTCTCCACGTCCGCGTCCACTCGGAAAT +
Preference number: 6 (lower is better)
Translates to: GFPALPGPVHSS*RTSPRPRPLGN
Trigger: ATTTCCGAGTGGACGCGGACGTGGAGAGGTTCTTCAACTACTGTGGACTGGACCCGGAAGAGCTGGAAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS CCA 72 bp CGGAAATATCTGTCACTCAAGTCTGACTTAGACCGCTaGAGGGAGGGTCTTCGGCTGACTCCACAAGCTGGT +
Preference number: 6 (lower is better)
Translates to: RKYLSLKSDLDR*REGLRLTPQAG
Trigger: ACCAGCTTGTGGAGTCAGCCGAAGACCCTCCCTCCAGCGGTCTAAGTCAGACTTGAGTGACAGATATTTCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS TCA 72 bp CTAGGAGGGGAACCGTCACCACTTCTACATCACCTCTaGTTTGGATGGGCTTGTCCTGTGCAGTCTGTTCCT +
Preference number: 6 (lower is better)
Translates to: LGGEPSPLLHHL*FGWACPVQSVP
Trigger: AGGAACAGACTGCACAGGACAAGCCCATCCAAATCAGAGGTGATGTAGAAGTGGTGACGGTTCCCCTCCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520369.5
CDS GCA 72 bp AGCCAAGGCAGGAAGTACTTCCAGATGGTGGATCTCTaGAATCCTGCTGGTCTTCAGCTGCTCCTGCAGTTT +
Preference number: 6 (lower is better)
Translates to: SQGRKYFQMVDL*NPAGLQLLLQF
Trigger: AAACTGCAGGAGCAGCTGAAGACCAGCAGGATTGCAGAGATCCACCATCTGGAAGTACTTCCTGCCTTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520369.5
CDS CCA 72 bp TTTCAGCAAGCCAAGGCAGGAAGTACTTCCAGATGGTaGATCTCTGCAATCCTGCTGGTCTTCAGCTGCTCC +
Preference number: 6 (lower is better)
Translates to: FQQAKAGSTSRW*ISAILLVFSCS
Trigger: GGAGCAGCTGAAGACCAGCAGGATTGCAGAGATCCACCATCTGGAAGTACTTCCTGCCTTGGCTTGCTGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520369.5
CDS CCA 72 bp GGATTTCAGCAAGCCAAGGCAGGAAGTACTTCCAGATaGTGGATCTCTGCAATCCTGCTGGTCTTCAGCTGC +
Preference number: 6 (lower is better)
Translates to: GFQQAKAGSTSR*WISAILLVFSC
Trigger: GCAGCTGAAGACCAGCAGGATTGCAGAGATCCACCATCTGGAAGTACTTCCTGCCTTGGCTTGCTGAAATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520369.5
CDS TCA 72 bp AAGGTCACTGTTACTGTCCTGAGACTGTTCACAGTCTaGGCTGATCATGCTTGCGCTGCGGAAGTTGAGGGA +
Preference number: 6 (lower is better)
Translates to: KVTVTVLRLFTV*ADHACAAEVEG
Trigger: TCCCTCAACTTCCGCAGCGCAAGCATGATCAGCTCAGACTGTGAACAGTCTCAGGACAGTAACAGTGACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS CCA 72 bp GTGCCTCAGCTGACATTTACTGGCCACCTCTCCTCTTaGGTAGGGACGCACCTTTTATTTCCTTTTCAGGAC +
Preference number: 6 (lower is better)
Translates to: VPQLTFTGHLSS*VGTHLLFPFQD
Trigger: GTCCTGAAAAGGAAATAAAAGGTGCGTCCCTACCCAAGAGGAGAGGTGGCCAGTAAATGTCAGCTGAGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS CCA 72 bp AGGGCCACATCTCCAGTAGCTGTGGTTCCAGTGTACTaGGATAACCCAGGACTGACTCACAGAATCTTAGCA +
Preference number: 6 (lower is better)
Translates to: RATSPVAVVPVY*DNPGLTHRILA
Trigger: TGCTAAGATTCTGTGAGTCAGTCCTGGGTTATCCCAGTACACTGGAACCACAGCTACTGGAGATGTGGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520369.5
CDS CAA 72 bp GGTGCCTCAGCTGACATTTACTGGCCACCTCTCCTCTaGGGTAGGGACGCACCTTTTATTTCCTTTTCAGGA +
Preference number: 6 (lower is better)
Translates to: GASADIYWPPLL*GRDAPFISFSG
Trigger: TCCTGAAAAGGAAATAAAAGGTGCGTCCCTACCCAAGAGGAGAGGTGGCCAGTAAATGTCAGCTGAGGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS TCA 72 bp GGCTTTCATAGGTCTTCCCCTGTGTCTCACATCATTTaGCCAGTGGAATCACTGAGAATCCTCCACAGCCTC +
Preference number: 6 (lower is better)
Translates to: GFHRSSPVSHII*PVESLRILHSL
Trigger: GAGGCTGTGGAGGATTCTCAGTGATTCCACTGGTCAAATGATGTGAGACACAGGGGAAGACCTATGAAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520369.5
CDS GCA 72 bp TTGTTTTTCAAGGGTGAAGGCTTTCAAGCTGGAGTCTaGAGAGCTGAGGATGTGGAGCATGTGGGAACGAAG +
Preference number: 6 (lower is better)
Translates to: LFFKGEGFQAGV*RAEDVEHVGTK
Trigger: CTTCGTTCCCACATGCTCCACATCCTCAGCTCTGCAGACTCCAGCTTGAAAGCCTTCACCCTTGAAAAACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000520369.5
ENST00000523486.5
CDS CCA 72 bp CATGTAAGACTTCCTTTTAACAAAGTTTGCCCTTGGTaGCTCAGGCCTGCACTTTGGGAGACTGAGCAGGGA +
Preference number: 6 (lower is better)
Translates to: HVRLPFNKVCPW*LRPALWETEQG
Trigger: TCCCTGCTCAGTCTCCCAAAGTGCAGGCCTGAGCCACCAAGGGCAAACTTTGTTAAAAGGAAGTCTTACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523486.5
CDS CCA 72 bp CTCCATGTAAGACTTCCTTTTAACAAAGTTTGCCCTTaGTGGCTCAGGCCTGCACTTTGGGAGACTGAGCAG +
Preference number: 6 (lower is better)
Translates to: LHVRLPFNKVCP*WLRPALWETEQ
Trigger: CTGCTCAGTCTCCCAAAGTGCAGGCCTGAGCCACCAAGGGCAAACTTTGTTAAAAGGAAGTCTTACATGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523486.5
CDS TCA 72 bp CCAGTACTACAACAATCAGGTGATGGCAACTGCTTATaGACATGGGGAGATGGAGATCTAGGTGGGTATGCG +
Preference number: 6 (lower is better)
Translates to: PVLQQSGDGNCL*TWGDGDLGGYA
Trigger: CGCATACCCACCTAGATCTCCATCTCCCCATGTTCATAAGCAGTTGCCATCACCTGATTGTTGTAGTACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520369.5
CDS CCA 72 bp CTAATTCAAGACGTAGACAGAACAAGAATGCTGCTCTaGATGTCCAATTTGGAGATTTCTGGGCCGCTCACC +
Preference number: 6 (lower is better)
Translates to: LIQDVDRTRMLL*MSNLEISGPLT
Trigger: GGTGAGCGGCCCAGAAATCTCCAAATTGGACATCCAGAGCAGCATTCTTGTTCTGTCTACGTCTTGAATTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361488.7
ENST00000519262.5
ENST00000520369.5
CDS TCA 72 bp CTATGTTATGGCATCCCCAGTACTACAACAATCAGGTaGTGGCAACTGCTTATGAACATGGGGAGATGGAGA +
Preference number: 6 (lower is better)
Translates to: LCYGIPSTTTIR*WQLLMNMGRWR
Trigger: TCTCCATCTCCCCATGTTCATAAGCAGTTGCCATCACCTGATTGTTGTAGTACTGGGGATGCCATAACATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520369.5
CDS GCA 72 bp TTCTACATCACCTCTGATTTGGATGGGCTTGTCCTGTaGAGTCTGTTCCTGTCTTCTCTGTTCGAACTATTC +
Preference number: 6 (lower is better)
Translates to: FYITSDLDGLVL*SLFLSSLFELF
Trigger: GAATAGTTCGAACAGAGAAGACAGGAACAGACTGCACAGGACAAGCCCATCCAAATCAGAGGTGATGTAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520369.5
CDS CCA 72 bp GAAGTACTTCCAGATGGTGGATCTCTGCAATCCTGCTaGTCTTCAGCTGCTCCTGCAGTTTTTAACTTTATT +
Preference number: 6 (lower is better)
Translates to: EVLPDGGSLQSC*SSAAPAVFNFI
Trigger: AATAAAGTTAAAAACTGCAGGAGCAGCTGAAGACCAGCAGGATTGCAGAGATCCACCATCTGGAAGTACTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520369.5
CDS CAA 90 bp TGGGTAGGGACGCACCTTTTATTTCCTTTTCAGGACTTACAGAGCTaGATAGTTTCTAATTCAAGACGTAGACAGAACAAGAATGCTGCT +
Preference number: 6 (lower is better)
Translates to: WVGTHLLFPFQDLQS*IVSNSRRRQNKNAA
Trigger: AGCAGCATTCTTGTTCTGTCTACGTCTTGAATTAGAAACTATCAAGCTCTGTAAGTCCTGAAAAGGAAATAAAAGGTGCGTCCCTACCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS CAA 90 bp GCACTGTCTTACACATGGGAGACCTTCTGTGACTCTCTAGCTTGTTaGATGCTATATAACCACTTGATGATTCTAGCATTTCTTTCGATG +
Preference number: 6 (lower is better)
Translates to: ALSYTWETFCDSLAC*MLYNHLMILAFLSM
Trigger: CATCGAAAGAAATGCTAGAATCATCAAGTGGTTATATAGCATCAAACAAGCTAGAGAGTCACAGAAGGTCTCCCATGTGTAAGACAGTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS TCA 72 bp TTGCAGAGATCATCACAGAGTCCCGAGGAGACATGGTaGATTCTGTCTTTATATTTCTTCCCCAGAATATTA +
Preference number: 6 (lower is better)
Translates to: LQRSSQSPEETW*ILSLYFFPRIL
Trigger: TAATATTCTGGGGAAGAAATATAAAGACAGAATTCACCATGTCTCCTCGGGACTCTGTGATGATCTCTGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520369.5
CDS CAA 72 bp TACACATGGGAGACCTTCTGTGACTCTCTAGCTTGTTaGATGCTATATAACCACTTGATGATTCTAGCATTT +
Preference number: 6 (lower is better)
Translates to: YTWETFCDSLAC*MLYNHLMILAF
Trigger: AAATGCTAGAATCATCAAGTGGTTATATAGCATCAAACAAGCTAGAGAGTCACAGAAGGTCTCCCATGTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361488.7
CDS CAA 72 bp ACGCACCTTTTATTTCCTTTTCAGGACTTACAGAGCTaGATAGTTTCTAATTCAAGACGTAGACAGAACAAG +
Preference number: 6 (lower is better)
Translates to: THLLFPFQDLQS*IVSNSRRRQNK
Trigger: CTTGTTCTGTCTACGTCTTGAATTAGAAACTATCAAGCTCTGTAAGTCCTGAAAAGGAAATAAAAGGTGCGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361488.7