RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM107A (Homo sapiens)

Ensembl gene IDs: ENSG00000168309

Ensembl transcript IDs: ENST00000360997.7, ENST00000394481.5, ENST00000447756.2, ENST00000464064.5, ENST00000465970.1, ENST00000474531.5, ENST00000497310.1, ENST00000649301.1

Found 918 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGAGAGCCAGGCCCTCTGGGGTGACACATTTCTACAGAAGCAGGTaGGAACATCACAGACGTCCCAGGGCCTGGGGCCCAGGGCTGCCA +
Preference number: 1 (lower is better)
Translates to: GRARPSGVTHFYRSR*EHHRRPRAWGPGLP
Trigger: TGGCAGCCCTGGGCCCCAGGCCCTGGGACGTCTGTGATGTTCCCACCTGCTTCTGTAGAAATGTGTCACCCCAGAGGGCCTGGCTCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR CCA 90 bp GTGAGGCACCGCTGCAGACTTCTGAGTGCAGGAATGCGGCAGCCCTaGGTAGGTGTGGTTAGAAGGCCTGGACGGGGAGGCTGTGCGGAG +
Preference number: 1 (lower is better)
Translates to: VRHRCRLLSAGMRQP*VGVVRRPGRGGCAE
Trigger: CTCCGCACAGCCTCCCCGTCCAGGCCTTCTAACCACACCTACCCAGGGCTGCCGCATTCCTGCACTCAGAAGTCTGCAGCGGTGCCTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR GCA 90 bp AGAGGGCCACCTCTTCCTCCTCAATTCTGCCAGAGAAAGCTCCTGTaGTGGGCTCTGAACCCCTTGCAGGGAGGGGTGCAGGTTATCCCT +
Preference number: 1 (lower is better)
Translates to: RGPPLPPQFCQRKLL*WALNPLQGGVQVIP
Trigger: AGGGATAACCTGCACCCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTGAGGAGGAAGAGGTGGCCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR GCA 90 bp CAGCCTGGTAGCTGGGGCACAGAGCATGAGACTGAGTTCTCCTTGTaGAGCCTGGTTCAAATCACTCACCCCCTCTGGGCCTCAGCTTCC +
Preference number: 1 (lower is better)
Translates to: QPGSWGTEHETEFSL*SLVQITHPLWASAS
Trigger: GGAAGCTGAGGCCCAGAGGGGGTGAGTGATTTGAACCAGGCTGCACAAGGAGAACTCAGTCTCATGCTCTGTGCCCCAGCTACCAGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464064.5
3UTR CCA 90 bp GGGCCACCTCTTCCTCCTCAATTCTGCCAGAGAAAGCTCCTGTGCTaGGCTCTGAACCCCTTGCAGGGAGGGGTGCAGGTTATCCCTCTT +
Preference number: 1 (lower is better)
Translates to: GPPLPPQFCQRKLLC*ALNPLQGGVQVIPL
Trigger: AAGAGGGATAACCTGCACCCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTGAGGAGGAAGAGGTGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR CCA 90 bp TGGAGCACCTCTGGGGACCACTGGGTGAATCCCCAGGCATTCCCTTaGAGAGCCCTCGTCCATCTGAGACCCTCTGTCTTGCTTCTCTTC +
Preference number: 1 (lower is better)
Translates to: WSTSGDHWVNPQAFP*RALVHLRPSVLLLF
Trigger: GAAGAGAAGCAAGACAGAGGGTCTCAGATGGACGAGGGCTCTCCAAGGGAATGCCTGGGGATTCACCCAGTGGTCCCCAGAGGTGCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR TCA 90 bp CTCTTCCTCCTCAATTCTGCCAGAGAAAGCTCCTGTGCTGGGCTCTaGACCCCTTGCAGGGAGGGGTGCAGGTTATCCCTCTTGGAGCAG +
Preference number: 1 (lower is better)
Translates to: LFLLNSARESSCAGL*TPCREGCRLSLLEQ
Trigger: CTGCTCCAAGAGGGATAACCTGCACCCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTGAGGAGGAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR CCA 90 bp TCATGGAATGACTTGTTGCCTCCATGGAGCACCTCTGGGGACCACTaGGTGAATCCCCAGGCATTCCCTTGGAGAGCCCTCGTCCATCTG +
Preference number: 1 (lower is better)
Translates to: SWNDLLPPWSTSGDH*VNPQAFPWRALVHL
Trigger: CAGATGGACGAGGGCTCTCCAAGGGAATGCCTGGGGATTCACCCAGTGGTCCCCAGAGGTGCTCCATGGAGGCAACAAGTCATTCCATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR CCA 90 bp CTGAAAAGTGAACCAAGGTCGTCTGCACGGCTGCCCTGGAGGGCGTaGTGCTTGAGGTCCCTTCTACCTCTGGGGCTTCATGGAATGACT +
Preference number: 1 (lower is better)
Translates to: LKSEPRSSARLPWRA*CLRSLLPLGLHGMT
Trigger: AGTCATTCCATGAAGCCCCAGAGGTAGAAGGGACCTCAAGCACCACGCCCTCCAGGGCAGCCGTGCAGACGACCTTGGTTCACTTTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR GCA 90 bp AAAAGTGAACCAAGGTCGTCTGCACGGCTGCCCTGGAGGGCGTGGTaGTTGAGGTCCCTTCTACCTCTGGGGCTTCATGGAATGACTTGT +
Preference number: 1 (lower is better)
Translates to: KSEPRSSARLPWRAW*LRSLLPLGLHGMTC
Trigger: ACAAGTCATTCCATGAAGCCCCAGAGGTAGAAGGGACCTCAAGCACCACGCCCTCCAGGGCAGCCGTGCAGACGACCTTGGTTCACTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR TCA 90 bp GAGAAGCAGAGAGTGAAGTGGGTGGAGCTAGGGGGATTCCTACTCTaGAAACCTGTGGAGTTTGGACCAAGGGCCCACTCAGTGGGGAAA +
Preference number: 1 (lower is better)
Translates to: EKQRVKWVELGGFLL*KPVEFGPRAHSVGK
Trigger: TTTCCCCACTGAGTGGGCCCTTGGTCCAAACTCCACAGGTTTTCAGAGTAGGAATCCCCCTAGCTCCACCCACTTCACTCTCTGCTTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464064.5
3UTR GCA 90 bp GCCTCTTGGAGCTTGACTTATACACACGCACACAGGCGCAATATCTaGATTTACAGCCCTGTGCTGGCAGCACACACAGGAAAAGCACGA +
Preference number: 1 (lower is better)
Translates to: ASWSLTYTHAHRRNI*IYSPVLAAHTGKAR
Trigger: TCGTGCTTTTCCTGTGTGTGCTGCCAGCACAGGGCTGTAAATGCAGATATTGCGCCTGTGTGCGTGTGTATAAGTCAAGCTCCAAGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR CCA 90 bp TGCTGCTCACAGCATGGTCCTCACACCAGCAGCCTCCGCCTTACCTaGGAGCTTGTTAGAAATGCAGGATCTCCCAGATCTATTGAGTTA +
Preference number: 1 (lower is better)
Translates to: CCSQHGPHTSSLRLT*ELVRNAGSPRSIEL
Trigger: TAACTCAATAGATCTGGGAGATCCTGCATTTCTAACAAGCTCCCAGGTAAGGCGGAGGCTGCTGGTGTGAGGACCATGCTGTGAGCAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR GCA 90 bp ATGAGTAAGACCAGAACAATCCCTTTCCTCCGACAGTCCCACGTTTaGTTCCAGGAATCAAAGAGCATGCCAGTGGCAGCTATCTGTGGC +
Preference number: 1 (lower is better)
Translates to: MSKTRTIPFLRQSHV*FQESKSMPVAAICG
Trigger: GCCACAGATAGCTGCCACTGGCATGCTCTTTGATTCCTGGAAGCAAACGTGGGACTGTCGGAGGAAAGGGATTGTTCTGGTCTTACTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR CCA 90 bp CCAGGAATCAAAGAGCATGCCAGTGGCAGCTATCTGTGGCAGTTTTaGGAAAGTGAAAGGAGATGCTATTCCAGCACTGCTCTGTCACCT +
Preference number: 1 (lower is better)
Translates to: PGIKEHASGSYLWQF*ESERRCYSSTALSP
Trigger: AGGTGACAGAGCAGTGCTGGAATAGCATCTCCTTTCACTTTCCCAAAACTGCCACAGATAGCTGCCACTGGCATGCTCTTTGATTCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR CCA 90 bp TTCCCTGACTTTAATAAACTCGGGGGCGTGATCCTCTTCCTTCTCTaGTGGTTTTTCCAGCTGAAGGAGGGAGAAGCAGAGAGTGAAGTG +
Preference number: 1 (lower is better)
Translates to: FPDFNKLGGVILFLL*WFFQLKEGEAESEV
Trigger: CACTTCACTCTCTGCTTCTCCCTCCTTCAGCTGGAAAAACCACCAGAGAAGGAAGAGGATCACGCCCCCGAGTTTATTAAAGTCAGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000464064.5
3UTR TCA 90 bp ACACAGGAAAAGCACGACTTCAGTCACCCTCAAACCACCCAGTTATaGGTAAGACCAGAACAATCCCTTTCCTCCGACAGTCCCACGTTT +
Preference number: 1 (lower is better)
Translates to: TQEKHDFSHPQTTQL*VRPEQSLSSDSPTF
Trigger: AAACGTGGGACTGTCGGAGGAAAGGGATTGTTCTGGTCTTACTCATAACTGGGTGGTTTGAGGGTGACTGAAGTCGTGCTTTTCCTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR CCA 90 bp CTGAGACCCTCTGTCTTGCTTCTCTTCACATGTCTGAACAACACATaGACCCGAGGGCTGCTTCTTTGGGGAAGTGGTGATCTTTATTTT +
Preference number: 1 (lower is better)
Translates to: LRPSVLLLFTCLNNT*TRGLLLWGSGDLYF
Trigger: AAAATAAAGATCACCACTTCCCCAAAGAAGCAGCCCTCGGGTCCATGTGTTGTTCAGACATGTGAAGAGAAGCAAGACAGAGGGTCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR CCA 90 bp GAAGAAGAGGCCCAGGGAGGTGTTAGCCATGCCTGTGTCTTTTATTaGAAAAGCTTTCCCAGAAGCCCAGGTAGACTTCCTCTTCAATTT +
Preference number: 1 (lower is better)
Translates to: EEEAQGGVSHACVFY*KSFPRSPGRLPLQF
Trigger: AAATTGAAGAGGAAGTCTACCTGGGCTTCTGGGAAAGCTTTTCCAATAAAAGACACAGGCATGGCTAACACCTCCCTGGGCCTCTTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR CCA 90 bp CTCTTCACATGTCTGAACAACACATGGACCCGAGGGCTGCTTCTTTaGGGAAGTGGTGATCTTTATTTTAGGGATTGTGCATCTTCAGTG +
Preference number: 1 (lower is better)
Translates to: LFTCLNNTWTRGLLL*GSGDLYFRDCASSV
Trigger: CACTGAAGATGCACAATCCCTAAAATAAAGATCACCACTTCCCCAAAGAAGCAGCCCTCGGGTCCATGTGTTGTTCAGACATGTGAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp TGGCCTGAGCCCGGCAGCTGGCCCTACAGCTCTCTCTCTTCGCTGGTCAGTGTGGGCCAGGGTGGGCAGTaGCCTGAGCCCGGCAGCTGG +
Preference number: 2 (lower is better)
Translates to: WPEPGSWPYSSLSSLVSVGQGGQ*PEPGSW
Trigger: CCAGCTGCCGGGCTCAGGCCACTGCCCACCCTGGCC...CACACTGACCAGCGAAGAGAGAGAGCTGTAGGGCCAGCTGCCGGGCTCAGGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464064.5
3UTR-3UTR TCA 90 bp CCCAGGGCTGCCAGGTACAGAAGGGCTGAAGGAGGCTGTCCAGGCCAGGGTGGGTCCTGTGCTGGGCTCTaGACCCCTTGCAGGGAGGGG +
Preference number: 2 (lower is better)
Translates to: PRAARYRRAEGGCPGQGGSCAGL*TPCREG
Trigger: CCCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGA...CCCACCCTGGCCTGGACAGCCTCCTTCAGCCCTTCTGTACCTGGCAGCCCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp GTCTTTGTTAGTCCCCGCCCACCTGGCCGGGATGCCAGCAACAAGGCCATCTGCGGCCAGGGTGGGCAGTaGCCTGAGCCCGGCAGCTGG +
Preference number: 2 (lower is better)
Translates to: VFVSPRPPGRDASNKAICGQGGQ*PEPGSW
Trigger: CCAGCTGCCGGGCTCAGGCCACTGCCCACCCTGGCC...GCAGATGGCCTTGTTGCTGGCATCCCGGCCAGGTGGGCGGGGACTAACAAAGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR TCA 90 bp CCAGGGCTGCCAGGTACAGAAGGGCTGAAGGAGGCTGTCCAGGCCAGGGTGGGCGGTGGGGGAGTTCTCTaGGACCTAGGAGCTGGGGTG +
Preference number: 2 (lower is better)
Translates to: PGLPGTEGLKEAVQARVGGGGVL*DLGAGV
Trigger: CACCCCAGCTCCTAGGTCTCAGAGAACTCCCCCACC...GCCCACCCTGGCCTGGACAGCCTCCTTCAGCCCTTCTGTACCTGGCAGCCCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR GCA 90 bp CCAGGGCTGCCAGGTACAGAAGGGCTGAAGGAGGCTGTCCAGGCCAGGGTGGGCCCCACCTGGCCGGGATaGCAGCAACAAGGCCATCTG +
Preference number: 2 (lower is better)
Translates to: PGLPGTEGLKEAVQARVGPTWPG*QQQGHL
Trigger: CAGATGGCCTTGTTGCTGGCATCCCGGCCAGGTGGG...GCCCACCCTGGCCTGGACAGCCTCCTTCAGCCCTTCTGTACCTGGCAGCCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp CCAGGGCTGCCAGGTACAGAAGGGCTGAAGGAGGCTGTCCAGGCCAGGGTGGGCAGCCTCGGAGATTCCTaGTGGGAAGGCCTGGGCAGA +
Preference number: 2 (lower is better)
Translates to: PGLPGTEGLKEAVQARVGSLGDS*WEGLGR
Trigger: TCTGCCCAGGCCTTCCCACCAGGAATCTCCGAGGCT...GCCCACCCTGGCCTGGACAGCCTCCTTCAGCCCTTCTGTACCTGGCAGCCCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp TCAATTCTGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGGGCCAGGGTGGGCAGTaGCCTGAGCCCGGCAGCTGG +
Preference number: 2 (lower is better)
Translates to: SILPEKAPVLGSEPLAGRGQGGQ*PEPGSW
Trigger: CCAGCTGCCGGGCTCAGGCCACTGCCCACCCTGGCC...CCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp CCAGGGCTGCCAGGTACAGAAGGGCTGAAGGAGGCTGTCCAGGCCAGGGTGGGCCCTGGTGGGAAGGCCTaGGCAGAACAGAAGGCTTGT +
Preference number: 2 (lower is better)
Translates to: PGLPGTEGLKEAVQARVGPGGKA*AEQKAC
Trigger: ACAAGCCTTCTGTTCTGCCCAGGCCTTCCCACCAGG...GCCCACCCTGGCCTGGACAGCCTCCTTCAGCCCTTCTGTACCTGGCAGCCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR GCA 90 bp CCAGGGCTGCCAGGTACAGAAGGGCTGAAGGAGGCTGTCCAGGCCAGGGTGGGCAGCAGGAGGGCTGGGTaGTTGGAAGGAAAACCTAGG +
Preference number: 2 (lower is better)
Translates to: PGLPGTEGLKEAVQARVGSRRAG*LEGKPR
Trigger: CCTAGGTTTTCCTTCCAAGCACCCAGCCCTCCTGCT...GCCCACCCTGGCCTGGACAGCCTCCTTCAGCCCTTCTGTACCTGGCAGCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp CCAGGGCTGCCAGGTACAGAAGGGCTGAAGGAGGCTGTCCAGGCCAGGGTGGGCAGAAAGCTCCTGTGCTaGGCTCTGAACCCCTTGCAG +
Preference number: 2 (lower is better)
Translates to: PGLPGTEGLKEAVQARVGRKLLC*ALNPLQ
Trigger: CTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCT...GCCCACCCTGGCCTGGACAGCCTCCTTCAGCCCTTCTGTACCTGGCAGCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp GGAATGCGGCAGCCCTGGGTAGGTGTGGTTAGAAGGCCTGGACGGGGAGGCTGTCTGAGACCTAGGAGCTaGGGTGTACGGAGAAGCGGG +
Preference number: 2 (lower is better)
Translates to: GMRQPWVGVVRRPGRGGCLRPRS*GVRRSG
Trigger: CCCGCTTCTCCGTACACCCCAGCTCCTAGGTCTCAG...ACAGCCTCCCCGTCCAGGCCTTCTAACCACACCTACCCAGGGCTGCCGCATTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR TCA 90 bp GTCTTTGTTAGTCCCCGCCCACCTGGCCGGGATGCCAGCAACAAGGCCATCTGCCAGGTACAGAAGGGCTaGAGGAGGCTGTCCAGGCCA +
Preference number: 2 (lower is better)
Translates to: VFVSPRPPGRDASNKAICQVQKG*RRLSRP
Trigger: TGGCCTGGACAGCCTCCTTCAGCCCTTCTGTACCTG...GCAGATGGCCTTGTTGCTGGCATCCCGGCCAGGTGGGCGGGGACTAACAAAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR TCA 90 bp CAATTCTGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGGTCCTGTGCTGGGCTCTaGACCCCTTGCAGGGAGGGG +
Preference number: 2 (lower is better)
Translates to: QFCQRKLLCWALNPLQGGSCAGL*TPCREG
Trigger: CCCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGA...CCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR GCA 90 bp TGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGGGTGCAGATCTGCAGTCTGCCCTaGCCTTCCTCCCCTCAGTGG +
Preference number: 2 (lower is better)
Translates to: CQRKLLCWALNPLQGGVQICSLP*PSSPQW
Trigger: CCACTGAGGGGAGGAAGGGCAGGGCAGACTGCAGAT...CTGCACCCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR GCA 90 bp TGTGAGGCACCGCTGCAGACTTCTGAGTGCAGGAATGCGGCAGCCCTGGGTAGGTGGGCACTCTCGCCCTaGTGCTCACAGCATGGTCCT +
Preference number: 2 (lower is better)
Translates to: CEAPLQTSECRNAAALGRWALSP*CSQHGP
Trigger: AGGACCATGCTGTGAGCAGCAGGGCGAGAGTGCCCA...CCTACCCAGGGCTGCCGCATTCCTGCACTCAGAAGTCTGCAGCGGTGCCTCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp ATTTACAGCCTCCACAGTTGGAGTGGCTGGAGATACAGAGTTGGGACGACCCCTGGCCAGGGTGGGCAGTaGCCTGAGCCCGGCAGCTGG +
Preference number: 2 (lower is better)
Translates to: IYSLHSWSGWRYRVGTTPGQGGQ*PEPGSW
Trigger: CCAGCTGCCGGGCTCAGGCCACTGCCCACCCTGGCC...AGGGGTCGTCCCAACTCTGTATCTCCAGCCACTCCAACTGTGGAGGCTGTAAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp GGAATGCGGCAGCCCTGGGTAGGTGTGGTTAGAAGGCCTGGACGGGGAGGCTGTCTCGGAGATTCCTGGTaGGAAGGCCTGGGCAGAACA +
Preference number: 2 (lower is better)
Translates to: GMRQPWVGVVRRPGRGGCLGDSW*EGLGRT
Trigger: TGTTCTGCCCAGGCCTTCCCACCAGGAATCTCCGAG...ACAGCCTCCCCGTCCAGGCCTTCTAACCACACCTACCCAGGGCTGCCGCATTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp TGTGAGGCACCGCTGCAGACTTCTGAGTGCAGGAATGCGGCAGCCCTGGGTAGGAGCCTCGGAGATTCCTaGTGGGAAGGCCTGGGCAGA +
Preference number: 2 (lower is better)
Translates to: CEAPLQTSECRNAAALGRSLGDS*WEGLGR
Trigger: TCTGCCCAGGCCTTCCCACCAGGAATCTCCGAGGCT...CCTACCCAGGGCTGCCGCATTCCTGCACTCAGAAGTCTGCAGCGGTGCCTCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp GTCTTTGTTAGTCCCCGCCCACCTGGCCGGGATGCCAGCAACAAGGCCATCTGCCCTGGTGGGAAGGCCTaGGCAGAACAGAAGGCTTGT +
Preference number: 2 (lower is better)
Translates to: VFVSPRPPGRDASNKAICPGGKA*AEQKAC
Trigger: ACAAGCCTTCTGTTCTGCCCAGGCCTTCCCACCAGG...GCAGATGGCCTTGTTGCTGGCATCCCGGCCAGGTGGGCGGGGACTAACAAAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR CAA 90 bp CCTCAATTCTGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTaGCAGGGAGGGGTGCAGGTTATCCCTCTTGGAGCAGGAGGGCTG +
Preference number: 2 (lower is better)
Translates to: PQFCQRKLLCWALNP*QGGVQVIPLGAGGL
Trigger: CAGCCCTCCTGCTCCAAGAGGGATAACCTGCACCCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR TCA 90 bp TTTGTGAGGCACCGCTGCAGACTTCTGAGTGCAGGAATGCGGCAGCCCTGGGTACAGGTACAGAAGGGCTaGAGGAGGCTGTCCAGGCCA +
Preference number: 2 (lower is better)
Translates to: FVRHRCRLLSAGMRQPWVQVQKG*RRLSRP
Trigger: TGGCCTGGACAGCCTCCTTCAGCCCTTCTGTACCTG...TACCCAGGGCTGCCGCATTCCTGCACTCAGAAGTCTGCAGCGGTGCCTCACAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR TCA 90 bp TCTGCCCTGCCCTTCCTCCCCTCAGTGGCTTTGAAGGCAGGTGTCCTTGAAGCTCAGGTACAGAAGGGCTaGAGGAGGCTGTCCAGGCCA +
Preference number: 2 (lower is better)
Translates to: SALPFLPSVALKAGVLEAQVQKG*RRLSRP
Trigger: TGGCCTGGACAGCCTCCTTCAGCCCTTCTGTACCTG...AGCTTCAAGGACACCTGCCTTCAAAGCCACTGAGGGGAGGAAGGGCAGGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR GCA 90 bp TGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGGGTGCAGCAGAGAAAGCTCCTGTaGTGGGCTCTGAACCCCTTG +
Preference number: 2 (lower is better)
Translates to: CQRKLLCWALNPLQGGVQQRKLL*WALNPL
Trigger: CAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTG...CTGCACCCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR GCA 90 bp TCAATTCTGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGCCCACCTGGCCGGGATaGCAGCAACAAGGCCATCTG +
Preference number: 2 (lower is better)
Translates to: SILPEKAPVLGSEPLAGRPTWPG*QQQGHL
Trigger: CAGATGGCCTTGTTGCTGGCATCCCGGCCAGGTGGG...CCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp TGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGGGTGCAGGAGAGCCAGGCCCTCTaGGGTGACACATTTCTACAG +
Preference number: 2 (lower is better)
Translates to: CQRKLLCWALNPLQGGVQESQAL*GDTFLQ
Trigger: CTGTAGAAATGTGTCACCCCAGAGGGCCTGGCTCTC...CTGCACCCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp TGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGGGTGCAGTTGGAGCAGGAGGGCTaGGTGCTTGGAAGGAAAACC +
Preference number: 2 (lower is better)
Translates to: CQRKLLCWALNPLQGGVQLEQEG*VLGRKT
Trigger: GGTTTTCCTTCCAAGCACCCAGCCCTCCTGCTCCAA...CTGCACCCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp TTCCTGGTGGGAAGGCCTGGGCAGAACAGAAGGCTTGTCAAGTCAGAGGGCCACGCAGGTTATCCCTCTTaGAGCAGGAGGGCTGGGTGC +
Preference number: 2 (lower is better)
Translates to: FLVGRPGQNRRLVKSEGHAGYPS*SRRAGC
Trigger: GCACCCAGCCCTCCTGCTCCAAGAGGGATAACCTGC...GTGGCCCTCTGACTTGACAAGCCTTCTGTTCTGCCCAGGCCTTCCCACCAGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp AACCACAGGTGGGGGAGTTCTCTGAGACCTAGGAGCTGGGGTGTACGGAGAAGCAGCCTCGGAGATTCCTaGTGGGAAGGCCTGGGCAGA +
Preference number: 2 (lower is better)
Translates to: NHRWGSSLRPRSWGVRRSSLGDS*WEGLGR
Trigger: TCTGCCCAGGCCTTCCCACCAGGAATCTCCGAGGCT...GCTTCTCCGTACACCCCAGCTCCTAGGTCTCAGAGAACTCCCCCACCTGTGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp CAGCTAGGGGTTGGGTCTCAGGTGACAGAGGCCGGGGATTCAGACTCAAAGGGGGGAATGCGGCAGCCCTaGGTAGGTGTGGTTAGAAGG +
Preference number: 2 (lower is better)
Translates to: QLGVGSQVTEAGDSDSKGGMRQP*VGVVRR
Trigger: CCTTCTAACCACACCTACCCAGGGCTGCCGCATTCC...CCCCTTTGAGTCTGAATCCCCGGCCTCTGTCACCTGAGACCCAACCCCTAGCTG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp CCCTCAGTGGCTTTGAAGGCAGGTGTCCTTGAAGCTAAGCTCTGCTGGCTGCAGCTGGGGTTGCAGAAGTaGGGTGGGAATCCCTGGGGC +
Preference number: 2 (lower is better)
Translates to: PSVALKAGVLEAKLCWLQLGLQK*GGNPWG
Trigger: GCCCCAGGGATTCCCACCCCACTTCTGCAACCCCAG...CTGCAGCCAGCAGAGCTTAGCTTCAAGGACACCTGCCTTCAAAGCCACTGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR TCA 90 bp GCAGCCTCCGCCTTACCTGGGAGCTTGTTAGAAATGCAGGATCTCCCAGATCTATCCTGTGCTGGGCTCTaGACCCCTTGCAGGGAGGGG +
Preference number: 2 (lower is better)
Translates to: AASALPGSLLEMQDLPDLSCAGL*TPCREG
Trigger: CCCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGA...TAGATCTGGGAGATCCTGCATTTCTAACAAGCTCCCAGGTAAGGCGGAGGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR TCA 90 bp TCCTACTCTGAAAACCTGTGGAGTTTGGACCAAGGGCCCACTCAGTGGGGAAACTCCTGTGCTGGGCTCTaGACCCCTTGCAGGGAGGGG +
Preference number: 2 (lower is better)
Translates to: SYSENLWSLDQGPTQWGNSCAGL*TPCREG
Trigger: CCCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGA...GTTTCCCCACTGAGTGGGCCCTTGGTCCAAACTCCACAGGTTTTCAGAGTAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000464064.5
3UTR-3UTR TCA 90 bp CCAGCAGCCTCCGCCTTACCTGGGAGCTTGTTAGAAATGCAGGATCTCCCAGATGGTGGGGGAGTTCTCTaGGACCTAGGAGCTGGGGTG +
Preference number: 2 (lower is better)
Translates to: PAASALPGSLLEMQDLPDGGGVL*DLGAGV
Trigger: CACCCCAGCTCCTAGGTCTCAGAGAACTCCCCCACC...ATCTGGGAGATCCTGCATTTCTAACAAGCTCCCAGGTAAGGCGGAGGCTGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR GCA 90 bp TTCCTGGTGGGAAGGCCTGGGCAGAACAGAAGGCTTGTCAAGTCAGAGGGCCACCTGCAGACTTCTGAGTaGAGGAATGCGGCAGCCCTG +
Preference number: 2 (lower is better)
Translates to: FLVGRPGQNRRLVKSEGHLQTSE*RNAAAL
Trigger: CAGGGCTGCCGCATTCCTGCACTCAGAAGTCTGCAG...GTGGCCCTCTGACTTGACAAGCCTTCTGTTCTGCCCAGGCCTTCCCACCAGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR GCA 90 bp CCCTCAGTGGCTTTGAAGGCAGGTGTCCTTGAAGCTAAGCTCTGCTGGCTGCAGTGGGCACTCTCGCCCTaGTGCTCACAGCATGGTCCT +
Preference number: 2 (lower is better)
Translates to: PSVALKAGVLEAKLCWLQWALSP*CSQHGP
Trigger: AGGACCATGCTGTGAGCAGCAGGGCGAGAGTGCCCA...CTGCAGCCAGCAGAGCTTAGCTTCAAGGACACCTGCCTTCAAAGCCACTGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp AACCACAGGTGGGGGAGTTCTCTGAGACCTAGGAGCTGGGGTGTACGGAGAAGCCCTGGTGGGAAGGCCTaGGCAGAACAGAAGGCTTGT +
Preference number: 2 (lower is better)
Translates to: NHRWGSSLRPRSWGVRRSPGGKA*AEQKAC
Trigger: ACAAGCCTTCTGTTCTGCCCAGGCCTTCCCACCAGG...GCTTCTCCGTACACCCCAGCTCCTAGGTCTCAGAGAACTCCCCCACCTGTGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp TCTGCCCTGCCCTTCCTCCCCTCAGTGGCTTTGAAGGCAGGTGTCCTTGAAGCTCCTGGTGGGAAGGCCTaGGCAGAACAGAAGGCTTGT +
Preference number: 2 (lower is better)
Translates to: SALPFLPSVALKAGVLEAPGGKA*AEQKAC
Trigger: ACAAGCCTTCTGTTCTGCCCAGGCCTTCCCACCAGG...AGCTTCAAGGACACCTGCCTTCAAAGCCACTGAGGGGAGGAAGGGCAGGGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp CAATTCTGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGGCTCGGAGATTCCTGGTaGGAAGGCCTGGGCAGAACA +
Preference number: 2 (lower is better)
Translates to: QFCQRKLLCWALNPLQGGLGDSW*EGLGRT
Trigger: TGTTCTGCCCAGGCCTTCCCACCAGGAATCTCCGAG...CCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp CAATTCTGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGGGGAATGCGGCAGCCCTaGGTAGGTGTGGTTAGAAGG +
Preference number: 2 (lower is better)
Translates to: QFCQRKLLCWALNPLQGGGMRQP*VGVVRR
Trigger: CCTTCTAACCACACCTACCCAGGGCTGCCGCATTCC...CCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp TGTGAGGCACCGCTGCAGACTTCTGAGTGCAGGAATGCGGCAGCCCTGGGTAGGAATATATATCAGCCCTaGGCACTCTCGCCCTGCTGC +
Preference number: 2 (lower is better)
Translates to: CEAPLQTSECRNAAALGRNIYQP*ALSPCC
Trigger: GCAGCAGGGCGAGAGTGCCCAGGGCTGATATATATT...CCTACCCAGGGCTGCCGCATTCCTGCACTCAGAAGTCTGCAGCGGTGCCTCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR TCA 90 bp TTCCTGGTGGGAAGGCCTGGGCAGAACAGAAGGCTTGTCAAGTCAGAGGGCCACCCAGGCCCTCTGGGGTaGCACATTTCTACAGAAGCA +
Preference number: 2 (lower is better)
Translates to: FLVGRPGQNRRLVKSEGHPGPLG*HISTEA
Trigger: TGCTTCTGTAGAAATGTGTCACCCCAGAGGGCCTGG...GTGGCCCTCTGACTTGACAAGCCTTCTGTTCTGCCCAGGCCTTCCCACCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR TCA 90 bp AACCACAGGTGGGGGAGTTCTCTGAGACCTAGGAGCTGGGGTGTACGGAGAAGCCCAGGCCCTCTGGGGTaGCACATTTCTACAGAAGCA +
Preference number: 2 (lower is better)
Translates to: NHRWGSSLRPRSWGVRRSPGPLG*HISTEA
Trigger: TGCTTCTGTAGAAATGTGTCACCCCAGAGGGCCTGG...GCTTCTCCGTACACCCCAGCTCCTAGGTCTCAGAGAACTCCCCCACCTGTGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR GCA 90 bp AACCACAGGTGGGGGAGTTCTCTGAGACCTAGGAGCTGGGGTGTACGGAGAAGCAGCAGGAGGGCTGGGTaGTTGGAAGGAAAACCTAGG +
Preference number: 2 (lower is better)
Translates to: NHRWGSSLRPRSWGVRRSSRRAG*LEGKPR
Trigger: CCTAGGTTTTCCTTCCAAGCACCCAGCCCTCCTGCT...GCTTCTCCGTACACCCCAGCTCCTAGGTCTCAGAGAACTCCCCCACCTGTGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR GCA 90 bp CCAGCAGCCTCCGCCTTACCTGGGAGCTTGTTAGAAATGCAGGATCTCCCAGATATCTGCAGTCTGCCCTaGCCTTCCTCCCCTCAGTGG +
Preference number: 2 (lower is better)
Translates to: PAASALPGSLLEMQDLPDICSLP*PSSPQW
Trigger: CCACTGAGGGGAGGAAGGGCAGGGCAGACTGCAGAT...ATCTGGGAGATCCTGCATTTCTAACAAGCTCCCAGGTAAGGCGGAGGCTGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR GCA 90 bp CCCTCAGTGGCTTTGAAGGCAGGTGTCCTTGAAGCTAAGCTCTGCTGGCTGCAGCTGCAGACTTCTGAGTaGAGGAATGCGGCAGCCCTG +
Preference number: 2 (lower is better)
Translates to: PSVALKAGVLEAKLCWLQLQTSE*RNAAAL
Trigger: CAGGGCTGCCGCATTCCTGCACTCAGAAGTCTGCAG...CTGCAGCCAGCAGAGCTTAGCTTCAAGGACACCTGCCTTCAAAGCCACTGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp CAATTCTGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGGGAGAGCCAGGCCCTCTaGGGTGACACATTTCTACAG +
Preference number: 2 (lower is better)
Translates to: QFCQRKLLCWALNPLQGGESQAL*GDTFLQ
Trigger: CTGTAGAAATGTGTCACCCCAGAGGGCCTGGCTCTC...CCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp CAATTCTGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGGTTGGAGCAGGAGGGCTaGGTGCTTGGAAGGAAAACC +
Preference number: 2 (lower is better)
Translates to: QFCQRKLLCWALNPLQGGLEQEG*VLGRKT
Trigger: GGTTTTCCTTCCAAGCACCCAGCCCTCCTGCTCCAA...CCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp TCCTCCTCAATTCTGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGCAGGTTATCCCTCTTaGAGCAGGAGGGCTGGGTGC +
Preference number: 2 (lower is better)
Translates to: SSSILPEKAPVLGSEPLAAGYPS*SRRAGC
Trigger: GCACCCAGCCCTCCTGCTCCAAGAGGGATAACCTGC...TGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTGAGGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp AACCACAGGTGGGGGAGTTCTCTGAGACCTAGGAGCTGGGGTGTACGGAGAAGCAGAAAGCTCCTGTGCTaGGCTCTGAACCCCTTGCAG +
Preference number: 2 (lower is better)
Translates to: NHRWGSSLRPRSWGVRRSRKLLC*ALNPLQ
Trigger: CTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCT...GCTTCTCCGTACACCCCAGCTCCTAGGTCTCAGAGAACTCCCCCACCTGTGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp CACAGCATGGTCCTCACACCAGCAGCCTCCGCCTTACCTGGGAGCTTGTTAGAACTCGGAGATTCCTGGTaGGAAGGCCTGGGCAGAACA +
Preference number: 2 (lower is better)
Translates to: HSMVLTPAASALPGSLLELGDSW*EGLGRT
Trigger: TGTTCTGCCCAGGCCTTCCCACCAGGAATCTCCGAG...TTCTAACAAGCTCCCAGGTAAGGCGGAGGCTGCTGGTGTGAGGACCATGCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp CACAGCATGGTCCTCACACCAGCAGCCTCCGCCTTACCTGGGAGCTTGTTAGAAGGAATGCGGCAGCCCTaGGTAGGTGTGGTTAGAAGG +
Preference number: 2 (lower is better)
Translates to: HSMVLTPAASALPGSLLEGMRQP*VGVVRR
Trigger: CCTTCTAACCACACCTACCCAGGGCTGCCGCATTCC...TTCTAACAAGCTCCCAGGTAAGGCGGAGGCTGCTGGTGTGAGGACCATGCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp CCCTCAGTGGCTTTGAAGGCAGGTGTCCTTGAAGCTAAGCTCTGCTGGCTGCAGGGAATGCGGCAGCCCTaGGTAGGTGTGGTTAGAAGG +
Preference number: 2 (lower is better)
Translates to: PSVALKAGVLEAKLCWLQGMRQP*VGVVRR
Trigger: CCTTCTAACCACACCTACCCAGGGCTGCCGCATTCC...CTGCAGCCAGCAGAGCTTAGCTTCAAGGACACCTGCCTTCAAAGCCACTGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp TTTGTGAGGCACCGCTGCAGACTTCTGAGTGCAGGAATGCGGCAGCCCTGGGTACAAGGGCCCACTCAGTaGGGAAACAGAACCAACCTG +
Preference number: 2 (lower is better)
Translates to: FVRHRCRLLSAGMRQPWVQGPTQ*GNRTNL
Trigger: CAGGTTGGTTCTGTTTCCCCACTGAGTGGGCCCTTG...TACCCAGGGCTGCCGCATTCCTGCACTCAGAAGTCTGCAGCGGTGCCTCACAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464064.5
3UTR-3UTR CCA 90 bp TGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGGGTGCAGAAAACCTGTGGAGTTTaGACCAAGGGCCCACTCAGT +
Preference number: 2 (lower is better)
Translates to: CQRKLLCWALNPLQGGVQKTCGV*TKGPLS
Trigger: ACTGAGTGGGCCCTTGGTCCAAACTCCACAGGTTTT...CTGCACCCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000464064.5
3UTR CAA 90 bp ATGATGAAAGCATGGGTGAGGGGAGAAGACCCTAAACAGCTGTCTTaGTTAGTCCCCGCCCACCTGGCCGGGATGCCAGCAACAAGGCCA +
Preference number: 2 (lower is better)
Translates to: MMKAWVRGEDPKQLS*LVPAHLAGMPATRP
Trigger: TGGCCTTGTTGCTGGCATCCCGGCCAGGTGGGCGGGGACTAACAAAGACAGCTGTTTAGGGTCTTCTCCCCTCACCCATGCTTTCATCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR CAA 90 bp TATCAGCCTGGTAGCTGGGGCACAGAGCATGAGACTGAGTTCTCCTaGTGCAGCCTGGTTCAAATCACTCACCCCCTCTGGGCCTCAGCT +
Preference number: 2 (lower is better)
Translates to: YQPGSWGTEHETEFS*CSLVQITHPLWASA
Trigger: AGCTGAGGCCCAGAGGGGGTGAGTGATTTGAACCAGGCTGCACAAGGAGAACTCAGTCTCATGCTCTGTGCCCCAGCTACCAGGCTGATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464064.5
3UTR-3UTR TCA 90 bp GAAAAATGGGTGAATTCACTGGAGTTGGCCCAGCTAGGGGTTGGGTCTCAGGTGCAGGTACAGAAGGGCTaGAGGAGGCTGTCCAGGCCA +
Preference number: 2 (lower is better)
Translates to: EKWVNSLELAQLGVGSQVQVQKG*RRLSRP
Trigger: TGGCCTGGACAGCCTCCTTCAGCCCTTCTGTACCTG...CACCTGAGACCCAACCCCTAGCTGGGCCAACTCCAGTGAATTCACCCATTTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR-3UTR TCA 90 bp GCTTTGAAGGCAGGTGTCCTTGAAGCTAAGCTCTGCTGGCTGCAGGTAAAACCAGGTGGGGGAGTTCTCTaGGACCTAGGAGCTGGGGTG +
Preference number: 2 (lower is better)
Translates to: ALKAGVLEAKLCWLQVKPGGGVL*DLGAGV
Trigger: CACCCCAGCTCCTAGGTCTCAGAGAACTCCCCCACC...TGGTTTTACCTGCAGCCAGCAGAGCTTAGCTTCAAGGACACCTGCCTTCAAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR TCA 90 bp CACAGCATGGTCCTCACACCAGCAGCCTCCGCCTTACCTGGGAGCTTGTTAGAATCCCCTCAGTGGCTTTaGAGGCAGGTGTCCTTGAAG +
Preference number: 2 (lower is better)
Translates to: HSMVLTPAASALPGSLLESPQWL*RQVSLK
Trigger: CTTCAAGGACACCTGCCTTCAAAGCCACTGAGGGGA...TTCTAACAAGCTCCCAGGTAAGGCGGAGGCTGCTGGTGTGAGGACCATGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR TCA 90 bp GCTCACAGCATGGTCCTCACACCAGCAGCCTCCGCCTTACCTGGGAGCTTGTTAGAACCAACCTGGGGATaGGTTTTGCTATCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: AHSMVLTPAASALPGSLLEPTWG*VLLSAW
Trigger: CCAGGCTGATAGCAAAACTCATCCCCAGGTTGGTTC...TAACAAGCTCCCAGGTAAGGCGGAGGCTGCTGGTGTGAGGACCATGCTGTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464064.5
3UTR-3UTR TCA 90 bp GCTCACAGCATGGTCCTCACACCAGCAGCCTCCGCCTTACCTGGGAGCTTGTTAGGTGGTTTTTCCAGCTaGAGGAGGGAGAAGCAGAGA +
Preference number: 2 (lower is better)
Translates to: AHSMVLTPAASALPGSLLGGFSS*RREKQR
Trigger: TCTCTGCTTCTCCCTCCTTCAGCTGGAAAAACCACC...TAACAAGCTCCCAGGTAAGGCGGAGGCTGCTGGTGTGAGGACCATGCTGTGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464064.5
3UTR-3UTR GCA 90 bp TCAATTCTGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGCAGAGAAAGCTCCTGTaGTGGGCTCTGAACCCCTTG +
Preference number: 2 (lower is better)
Translates to: SILPEKAPVLGSEPLAGRQRKLL*WALNPL
Trigger: CAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTG...CCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR GCA 90 bp GTCTTTGTTAGTCCCCGCCCACCTGGCCGGGATGCCAGCAACAAGGCCATCTGCCTTGAAGCTAAGCTCTaGTGGCTGCAGGTAAAACCA +
Preference number: 2 (lower is better)
Translates to: VFVSPRPPGRDASNKAICLEAKL*WLQVKP
Trigger: TGGTTTTACCTGCAGCCAGCAGAGCTTAGCTTCAAG...GCAGATGGCCTTGTTGCTGGCATCCCGGCCAGGTGGGCGGGGACTAACAAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp CCCTCAGTGGCTTTGAAGGCAGGTGTCCTTGAAGCTAAGCTCTGCTGGCTGCAGGAGAGCCAGGCCCTCTaGGGTGACACATTTCTACAG +
Preference number: 2 (lower is better)
Translates to: PSVALKAGVLEAKLCWLQESQAL*GDTFLQ
Trigger: CTGTAGAAATGTGTCACCCCAGAGGGCCTGGCTCTC...CTGCAGCCAGCAGAGCTTAGCTTCAAGGACACCTGCCTTCAAAGCCACTGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp CACAGCATGGTCCTCACACCAGCAGCCTCCGCCTTACCTGGGAGCTTGTTAGAATTGGAGCAGGAGGGCTaGGTGCTTGGAAGGAAAACC +
Preference number: 2 (lower is better)
Translates to: HSMVLTPAASALPGSLLELEQEG*VLGRKT
Trigger: GGTTTTCCTTCCAAGCACCCAGCCCTCCTGCTCCAA...TTCTAACAAGCTCCCAGGTAAGGCGGAGGCTGCTGGTGTGAGGACCATGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp CCCTCAGTGGCTTTGAAGGCAGGTGTCCTTGAAGCTAAGCTCTGCTGGCTGCAGAGAAAGCTCCTGTGCTaGGCTCTGAACCCCTTGCAG +
Preference number: 2 (lower is better)
Translates to: PSVALKAGVLEAKLCWLQRKLLC*ALNPLQ
Trigger: CTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCT...CTGCAGCCAGCAGAGCTTAGCTTCAAGGACACCTGCCTTCAAAGCCACTGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp GCAGCCTCCGCCTTACCTGGGAGCTTGTTAGAAATGCAGGATCTCCCAGATCTACTGAGACCTAGGAGCTaGGGTGTACGGAGAAGCGGG +
Preference number: 2 (lower is better)
Translates to: AASALPGSLLEMQDLPDLLRPRS*GVRRSG
Trigger: CCCGCTTCTCCGTACACCCCAGCTCCTAGGTCTCAG...TAGATCTGGGAGATCCTGCATTTCTAACAAGCTCCCAGGTAAGGCGGAGGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp GCTCACAGCATGGTCCTCACACCAGCAGCCTCCGCCTTACCTGGGAGCTTGTTATATCAGCCTGGTAGCTaGGGCACAGAGCATGAGACT +
Preference number: 2 (lower is better)
Translates to: AHSMVLTPAASALPGSLLYQPGS*GTEHET
Trigger: AGTCTCATGCTCTGTGCCCCAGCTACCAGGCTGATA...TAACAAGCTCCCAGGTAAGGCGGAGGCTGCTGGTGTGAGGACCATGCTGTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464064.5
3UTR-3UTR TCA 90 bp TCACATAACCAACACAATTTGCTAGGCCAAAGTCTTCACGGGCAATCCCTGGGGGGTGGGGGAGTTCTCTaGGACCTAGGAGCTGGGGTG +
Preference number: 2 (lower is better)
Translates to: SHNQHNLLGQSLHGQSLGGGGVL*DLGAGV
Trigger: CACCCCAGCTCCTAGGTCTCAGAGAACTCCCCCACC...CCCCAGGGATTGCCCGTGAAGACTTTGGCCTAGCAAATTGTGTTGGTTATGTGA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR TCA 90 bp CCAGTTATGAGTAAGACCAGAACAATCCCTTTCCTCCGACAGTCCCACGTTTGCGGGTTGGGTCTCAGGTaGCAGAGGCCGGGGATTCAG +
Preference number: 2 (lower is better)
Translates to: PVMSKTRTIPFLRQSHVCGLGLR*QRPGIQ
Trigger: CTGAATCCCCGGCCTCTGTCACCTGAGACCCAACCC...GCAAACGTGGGACTGTCGGAGGAAAGGGATTGTTCTGGTCTTACTCATAACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR-3UTR GCA 90 bp CAATTCTGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGGCTTCCTCCTCAATTCTaGCAGAGAAAGCTCCTGTGC +
Preference number: 2 (lower is better)
Translates to: QFCQRKLLCWALNPLQGGLPPQF*QRKLLC
Trigger: GCACAGGAGCTTTCTCTGGCAGAATTGAGGAGGAAG...CCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp TCCTCCTCAATTCTGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGAGAGCCAGGCCCTCTaGGGTGACACATTTCTACAG +
Preference number: 2 (lower is better)
Translates to: SSSILPEKAPVLGSEPLAESQAL*GDTFLQ
Trigger: CTGTAGAAATGTGTCACCCCAGAGGGCCTGGCTCTC...TGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTGAGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp CACAGGAGGTGGGGGCCAGCGATGGCTTCAGGGGTGATATTTCCAATATATATCAGCCTCGGAGATTCCTaGTGGGAAGGCCTGGGCAGA +
Preference number: 2 (lower is better)
Translates to: HRRWGPAMASGVIFPIYISLGDS*WEGLGR
Trigger: TCTGCCCAGGCCTTCCCACCAGGAATCTCCGAGGCT...GATATATATTGGAAATATCACCCCTGAAGCCATCGCTGGCCCCCACCTCCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp ATGAGTAAGACCAGAACAATCCCTTTCCTCCGACAGTCCCACGTTTGCTTCCAGCTGGGGTTGCAGAAGTaGGGTGGGAATCCCTGGGGC +
Preference number: 2 (lower is better)
Translates to: MSKTRTIPFLRQSHVCFQLGLQK*GGNPWG
Trigger: GCCCCAGGGATTCCCACCCCACTTCTGCAACCCCAG...CTGGAAGCAAACGTGGGACTGTCGGAGGAAAGGGATTGTTCTGGTCTTACTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp TCAATTCTGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGGCTCTCTCTCTTCGCTaGTCAGTGTGGCAATTCTCC +
Preference number: 2 (lower is better)
Translates to: SILPEKAPVLGSEPLAGRALSLR*SVWQFS
Trigger: GGAGAATTGCCACACTGACCAGCGAAGAGAGAGAGC...CCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464064.5
3UTR-3UTR TCA 90 bp ACAAGATCCCCAGTGATTTTTATGCACAATCAAGTTTGTGAGGCACCGCTGCAGTCCTGTGCTGGGCTCTaGACCCCTTGCAGGGAGGGG +
Preference number: 2 (lower is better)
Translates to: TRSPVIFMHNQVCEAPLQSCAGL*TPCREG
Trigger: CCCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGA...CTGCAGCGGTGCCTCACAAACTTGATTGTGCATAAAAATCACTGGGGATCTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR TCA 90 bp GCAGCCTCCGCCTTACCTGGGAGCTTGTTAGAAATGCAGGATCTCCCAGATCTATCCCCTCAGTGGCTTTaGAGGCAGGTGTCCTTGAAG +
Preference number: 2 (lower is better)
Translates to: AASALPGSLLEMQDLPDLSPQWL*RQVSLK
Trigger: CTTCAAGGACACCTGCCTTCAAAGCCACTGAGGGGA...TAGATCTGGGAGATCCTGCATTTCTAACAAGCTCCCAGGTAAGGCGGAGGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR TCA 90 bp GAAAAATGGGTGAATTCACTGGAGTTGGCCCAGCTAGGGGTTGGGTCTCAGGTGTCCCCTCAGTGGCTTTaGAGGCAGGTGTCCTTGAAG +
Preference number: 2 (lower is better)
Translates to: EKWVNSLELAQLGVGSQVSPQWL*RQVSLK
Trigger: CTTCAAGGACACCTGCCTTCAAAGCCACTGAGGGGA...CACCTGAGACCCAACCCCTAGCTGGGCCAACTCCAGTGAATTCACCCATTTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR-3UTR GCA 90 bp ATTTACAGCCTCCACAGTTGGAGTGGCTGGAGATACAGAGTTGGGACGACCCCTCAGAGAAAGCTCCTGTaGTGGGCTCTGAACCCCTTG +
Preference number: 2 (lower is better)
Translates to: IYSLHSWSGWRYRVGTTPQRKLL*WALNPL
Trigger: CAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTG...AGGGGTCGTCCCAACTCTGTATCTCCAGCCACTCCAACTGTGGAGGCTGTAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR-3UTR GCA 90 bp TTCCTGGTGGGAAGGCCTGGGCAGAACAGAAGGCTTGTCAAGTCAGAGGGCCACCTTGAAGCTAAGCTCTaGTGGCTGCAGGTAAAACCA +
Preference number: 2 (lower is better)
Translates to: FLVGRPGQNRRLVKSEGHLEAKL*WLQVKP
Trigger: TGGTTTTACCTGCAGCCAGCAGAGCTTAGCTTCAAG...GTGGCCCTCTGACTTGACAAGCCTTCTGTTCTGCCCAGGCCTTCCCACCAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR GCA 90 bp ATGAGTAAGACCAGAACAATCCCTTTCCTCCGACAGTCCCACGTTTGCTTCCAGGCACTCTCGCCCTGCTaGTCACAGCATGGTCCTCAC +
Preference number: 2 (lower is better)
Translates to: MSKTRTIPFLRQSHVCFQALSPC*SQHGPH
Trigger: GTGAGGACCATGCTGTGAGCAGCAGGGCGAGAGTGC...CTGGAAGCAAACGTGGGACTGTCGGAGGAAAGGGATTGTTCTGGTCTTACTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp ATTTACAGCCTCCACAGTTGGAGTGGCTGGAGATACAGAGTTGGGACGACCCCTTTGGAGCAGGAGGGCTaGGTGCTTGGAAGGAAAACC +
Preference number: 2 (lower is better)
Translates to: IYSLHSWSGWRYRVGTTPLEQEG*VLGRKT
Trigger: GGTTTTCCTTCCAAGCACCCAGCCCTCCTGCTCCAA...AGGGGTCGTCCCAACTCTGTATCTCCAGCCACTCCAACTGTGGAGGCTGTAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp GAAAAATGGGTGAATTCACTGGAGTTGGCCCAGCTAGGGGTTGGGTCTCAGGTGAGAAAGCTCCTGTGCTaGGCTCTGAACCCCTTGCAG +
Preference number: 2 (lower is better)
Translates to: EKWVNSLELAQLGVGSQVRKLLC*ALNPLQ
Trigger: CTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCT...CACCTGAGACCCAACCCCTAGCTGGGCCAACTCCAGTGAATTCACCCATTTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp GCTTTGAAGGCAGGTGTCCTTGAAGCTAAGCTCTGCTGGCTGCAGGTAAAACCACTCGGAGATTCCTGGTaGGAAGGCCTGGGCAGAACA +
Preference number: 2 (lower is better)
Translates to: ALKAGVLEAKLCWLQVKPLGDSW*EGLGRT
Trigger: TGTTCTGCCCAGGCCTTCCCACCAGGAATCTCCGAG...TGGTTTTACCTGCAGCCAGCAGAGCTTAGCTTCAAGGACACCTGCCTTCAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp TCACATAACCAACACAATTTGCTAGGCCAAAGTCTTCACGGGCAATCCCTGGGGCTGAGACCTAGGAGCTaGGGTGTACGGAGAAGCGGG +
Preference number: 2 (lower is better)
Translates to: SHNQHNLLGQSLHGQSLGLRPRS*GVRRSG
Trigger: CCCGCTTCTCCGTACACCCCAGCTCCTAGGTCTCAG...CCCCAGGGATTGCCCGTGAAGACTTTGGCCTAGCAAATTGTGTTGGTTATGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp CCCTCAGTGGCTTTGAAGGCAGGTGTCCTTGAAGCTAAGCTCTGCTGGCTGCAGAGCCTCCGCCTTACCTaGGAGCTTGTTAGAAATGCA +
Preference number: 2 (lower is better)
Translates to: PSVALKAGVLEAKLCWLQSLRLT*ELVRNA
Trigger: TGCATTTCTAACAAGCTCCCAGGTAAGGCGGAGGCT...CTGCAGCCAGCAGAGCTTAGCTTCAAGGACACCTGCCTTCAAAGCCACTGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp CACAGGAGGTGGGGGCCAGCGATGGCTTCAGGGGTGATATTTCCAATATATATCGTTGCAGAAGTGGGGTaGGAATCCCTGGGGCATCAG +
Preference number: 2 (lower is better)
Translates to: HRRWGPAMASGVIFPIYIVAEVG*ESLGHQ
Trigger: CTGATGCCCCAGGGATTCCCACCCCACTTCTGCAAC...GATATATATTGGAAATATCACCCCTGAAGCCATCGCTGGCCCCCACCTCCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp GTCCACAGGAGGTGGGGGCCAGCGATGGCTTCAGGGGTGATATTTCCAATATATGACTCAGGCCAGGAGTaGACTCTTAGTCCAGTGCTC +
Preference number: 2 (lower is better)
Translates to: VHRRWGPAMASGVIFPIYDSGQE*TLSPVL
Trigger: GAGCACTGGACTAAGAGTCCACTCCTGGCCTGAGTC...ATATATTGGAAATATCACCCCTGAAGCCATCGCTGGCCCCCACCTCCTGTGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464064.5
3UTR-3UTR TCA 90 bp GCTTTGAAGGCAGGTGTCCTTGAAGCTAAGCTCTGCTGGCTGCAGGTAAAACCACCAGGCCCTCTGGGGTaGCACATTTCTACAGAAGCA +
Preference number: 2 (lower is better)
Translates to: ALKAGVLEAKLCWLQVKPPGPLG*HISTEA
Trigger: TGCTTCTGTAGAAATGTGTCACCCCAGAGGGCCTGG...TGGTTTTACCTGCAGCCAGCAGAGCTTAGCTTCAAGGACACCTGCCTTCAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR TCA 90 bp GCCTGTGTCTTTTATTGGAAAAGCTTTCCCAGAAGCCCAGGTAGACTTCCTCTTGGTGGGGGAGTTCTCTaGGACCTAGGAGCTGGGGTG +
Preference number: 2 (lower is better)
Translates to: ACVFYWKSFPRSPGRLPLGGGVL*DLGAGV
Trigger: CACCCCAGCTCCTAGGTCTCAGAGAACTCCCCCACC...AAGAGGAAGTCTACCTGGGCTTCTGGGAAAGCTTTTCCAATAAAAGACACAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR-3UTR TCA 90 bp CAACACTCACATAACCAACACAATTTGCTAGGCCAAAGTCTTCACGGGCAATCCGGTGGGGGAGTTCTCTaGGACCTAGGAGCTGGGGTG +
Preference number: 2 (lower is better)
Translates to: QHSHNQHNLLGQSLHGQSGGGVL*DLGAGV
Trigger: CACCCCAGCTCCTAGGTCTCAGAGAACTCCCCCACC...GGATTGCCCGTGAAGACTTTGGCCTAGCAAATTGTGTTGGTTATGTGAGTGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR GCA 90 bp CAGGAATCAAAGAGCATGCCAGTGGCAGCTATCTGTGGCAGTTTTGGGAAAGTGCCTTGCAGGGAGGGGTaGAGGTTATCCCTCTTGGAG +
Preference number: 2 (lower is better)
Translates to: QESKSMPVAAICGSFGKVPCREG*RLSLLE
Trigger: CTCCAAGAGGGATAACCTGCACCCCTCCCTGCAAGG...CACTTTCCCAAAACTGCCACAGATAGCTGCCACTGGCATGCTCTTTGATTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR-3UTR GCA 90 bp CAATTTGCTAGGCCAAAGTCTTCACGGGCAATCCCTGGGGTGGGAGTCTGGGATCTTCCTCCTCAATTCTaGCAGAGAAAGCTCCTGTGC +
Preference number: 2 (lower is better)
Translates to: QFARPKSSRAIPGVGVWDLPPQF*QRKLLC
Trigger: GCACAGGAGCTTTCTCTGGCAGAATTGAGGAGGAAG...ATCCCAGACTCCCACCCCAGGGATTGCCCGTGAAGACTTTGGCCTAGCAAATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR GCA 90 bp CAACACTCACATAACCAACACAATTTGCTAGGCCAAAGTCTTCACGGGCAATCCCCCACCTGGCCGGGATaGCAGCAACAAGGCCATCTG +
Preference number: 2 (lower is better)
Translates to: QHSHNQHNLLGQSLHGQSPTWPG*QQQGHL
Trigger: CAGATGGCCTTGTTGCTGGCATCCCGGCCAGGTGGG...GGATTGCCCGTGAAGACTTTGGCCTAGCAAATTGTGTTGGTTATGTGAGTGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR GCA 90 bp CGCCTTACCTGGGAGCTTGTTAGAAATGCAGGATCTCCCAGATCTATTGAGTTACCCACCTGGCCGGGATaGCAGCAACAAGGCCATCTG +
Preference number: 2 (lower is better)
Translates to: RLTWELVRNAGSPRSIELPTWPG*QQQGHL
Trigger: CAGATGGCCTTGTTGCTGGCATCCCGGCCAGGTGGG...TAACTCAATAGATCTGGGAGATCCTGCATTTCTAACAAGCTCCCAGGTAAGGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp CCAGTTATGAGTAAGACCAGAACAATCCCTTTCCTCCGACAGTCCCACGTTTGCCCTGGTGGGAAGGCCTaGGCAGAACAGAAGGCTTGT +
Preference number: 2 (lower is better)
Translates to: PVMSKTRTIPFLRQSHVCPGGKA*AEQKAC
Trigger: ACAAGCCTTCTGTTCTGCCCAGGCCTTCCCACCAGG...GCAAACGTGGGACTGTCGGAGGAAAGGGATTGTTCTGGTCTTACTCATAACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp CAGGAATCAAAGAGCATGCCAGTGGCAGCTATCTGTGGCAGTTTTGGGAAAGTGCTCGGAGATTCCTGGTaGGAAGGCCTGGGCAGAACA +
Preference number: 2 (lower is better)
Translates to: QESKSMPVAAICGSFGKVLGDSW*EGLGRT
Trigger: TGTTCTGCCCAGGCCTTCCCACCAGGAATCTCCGAG...CACTTTCCCAAAACTGCCACAGATAGCTGCCACTGGCATGCTCTTTGATTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp TCAAAGAGCATGCCAGTGGCAGCTATCTGTGGCAGTTTTGGGAAAGTGAAAGGAAGCCTCGGAGATTCCTaGTGGGAAGGCCTGGGCAGA +
Preference number: 2 (lower is better)
Translates to: SKSMPVAAICGSFGKVKGSLGDS*WEGLGR
Trigger: TCTGCCCAGGCCTTCCCACCAGGAATCTCCGAGGCT...TCCTTTCACTTTCCCAAAACTGCCACAGATAGCTGCCACTGGCATGCTCTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp TCACATAACCAACACAATTTGCTAGGCCAAAGTCTTCACGGGCAATCCCTGGGGGGAATGCGGCAGCCCTaGGTAGGTGTGGTTAGAAGG +
Preference number: 2 (lower is better)
Translates to: SHNQHNLLGQSLHGQSLGGMRQP*VGVVRR
Trigger: CCTTCTAACCACACCTACCCAGGGCTGCCGCATTCC...CCCCAGGGATTGCCCGTGAAGACTTTGGCCTAGCAAATTGTGTTGGTTATGTGA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR TCA 90 bp CAACACTCACATAACCAACACAATTTGCTAGGCCAAAGTCTTCACGGGCAATCCCAGGTACAGAAGGGCTaGAGGAGGCTGTCCAGGCCA +
Preference number: 2 (lower is better)
Translates to: QHSHNQHNLLGQSLHGQSQVQKG*RRLSRP
Trigger: TGGCCTGGACAGCCTCCTTCAGCCCTTCTGTACCTG...GGATTGCCCGTGAAGACTTTGGCCTAGCAAATTGTGTTGGTTATGTGAGTGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR TCA 90 bp GGCCAGTCCATAAAGGTGGCAGTGGGGTCTTCAAACCACTGTTTCTATTCCAGACCAGGCCCTCTGGGGTaGCACATTTCTACAGAAGCA +
Preference number: 2 (lower is better)
Translates to: GQSIKVAVGSSNHCFYSRPGPLG*HISTEA
Trigger: TGCTTCTGTAGAAATGTGTCACCCCAGAGGGCCTGG...TCTGGAATAGAAACAGTGGTTTGAAGACCCCACTGCCACCTTTATGGACTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR-3UTR TCA 90 bp TCACATAACCAACACAATTTGCTAGGCCAAAGTCTTCACGGGCAATCCCTGGGGTCCCCTCAGTGGCTTTaGAGGCAGGTGTCCTTGAAG +
Preference number: 2 (lower is better)
Translates to: SHNQHNLLGQSLHGQSLGSPQWL*RQVSLK
Trigger: CTTCAAGGACACCTGCCTTCAAAGCCACTGAGGGGA...CCCCAGGGATTGCCCGTGAAGACTTTGGCCTAGCAAATTGTGTTGGTTATGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR GCA 90 bp AAATGGGTGAATTCACTGGAGTTGGCCCAGCTAGGGGTTGGGTCTCAGGTGACACTTCCTCCTCAATTCTaGCAGAGAAAGCTCCTGTGC +
Preference number: 2 (lower is better)
Translates to: KWVNSLELAQLGVGSQVTLPPQF*QRKLLC
Trigger: GCACAGGAGCTTTCTCTGGCAGAATTGAGGAGGAAG...TGTCACCTGAGACCCAACCCCTAGCTGGGCCAACTCCAGTGAATTCACCCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR-3UTR GCA 90 bp CCAGCAGCCTCCGCCTTACCTGGGAGCTTGTTAGAAATGCAGGATCTCCCAGATCTTGAAGCTAAGCTCTaGTGGCTGCAGGTAAAACCA +
Preference number: 2 (lower is better)
Translates to: PAASALPGSLLEMQDLPDLEAKL*WLQVKP
Trigger: TGGTTTTACCTGCAGCCAGCAGAGCTTAGCTTCAAG...ATCTGGGAGATCCTGCATTTCTAACAAGCTCCCAGGTAAGGCGGAGGCTGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR GCA 90 bp ACAAGATCCCCAGTGATTTTTATGCACAATCAAGTTTGTGAGGCACCGCTGCAGATCTGCAGTCTGCCCTaGCCTTCCTCCCCTCAGTGG +
Preference number: 2 (lower is better)
Translates to: TRSPVIFMHNQVCEAPLQICSLP*PSSPQW
Trigger: CCACTGAGGGGAGGAAGGGCAGGGCAGACTGCAGAT...CTGCAGCGGTGCCTCACAAACTTGATTGTGCATAAAAATCACTGGGGATCTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp TTTATGCACAATCAAGTTTGTGAGGCACCGCTGCAGACTTCTGAGTGCAGGAATGCAGGTTATCCCTCTTaGAGCAGGAGGGCTGGGTGC +
Preference number: 2 (lower is better)
Translates to: FMHNQVCEAPLQTSECRNAGYPS*SRRAGC
Trigger: GCACCCAGCCCTCCTGCTCCAAGAGGGATAACCTGC...ATTCCTGCACTCAGAAGTCTGCAGCGGTGCCTCACAAACTTGATTGTGCATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp ACAAGATCCCCAGTGATTTTTATGCACAATCAAGTTTGTGAGGCACCGCTGCAGGCAGGTTATCCCTCTTaGAGCAGGAGGGCTGGGTGC +
Preference number: 2 (lower is better)
Translates to: TRSPVIFMHNQVCEAPLQAGYPS*SRRAGC
Trigger: GCACCCAGCCCTCCTGCTCCAAGAGGGATAACCTGC...CTGCAGCGGTGCCTCACAAACTTGATTGTGCATAAAAATCACTGGGGATCTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp ACAAGATCCCCAGTGATTTTTATGCACAATCAAGTTTGTGAGGCACCGCTGCAGCTGAGACCTAGGAGCTaGGGTGTACGGAGAAGCGGG +
Preference number: 2 (lower is better)
Translates to: TRSPVIFMHNQVCEAPLQLRPRS*GVRRSG
Trigger: CCCGCTTCTCCGTACACCCCAGCTCCTAGGTCTCAG...CTGCAGCGGTGCCTCACAAACTTGATTGTGCATAAAAATCACTGGGGATCTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp TTTATGCACAATCAAGTTTGTGAGGCACCGCTGCAGACTTCTGAGTGCAGGAATCTGAGACCTAGGAGCTaGGGTGTACGGAGAAGCGGG +
Preference number: 2 (lower is better)
Translates to: FMHNQVCEAPLQTSECRNLRPRS*GVRRSG
Trigger: CCCGCTTCTCCGTACACCCCAGCTCCTAGGTCTCAG...ATTCCTGCACTCAGAAGTCTGCAGCGGTGCCTCACAAACTTGATTGTGCATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp GCAGCCTCCGCCTTACCTGGGAGCTTGTTAGAAATGCAGGATCTCCCAGATCTAAGCCTCCGCCTTACCTaGGAGCTTGTTAGAAATGCA +
Preference number: 2 (lower is better)
Translates to: AASALPGSLLEMQDLPDLSLRLT*ELVRNA
Trigger: TGCATTTCTAACAAGCTCCCAGGTAAGGCGGAGGCT...TAGATCTGGGAGATCCTGCATTTCTAACAAGCTCCCAGGTAAGGCGGAGGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp TCAAAGAGCATGCCAGTGGCAGCTATCTGTGGCAGTTTTGGGAAAGTGAAAGGAGTTGCAGAAGTGGGGTaGGAATCCCTGGGGCATCAG +
Preference number: 2 (lower is better)
Translates to: SKSMPVAAICGSFGKVKGVAEVG*ESLGHQ
Trigger: CTGATGCCCCAGGGATTCCCACCCCACTTCTGCAAC...TCCTTTCACTTTCCCAAAACTGCCACAGATAGCTGCCACTGGCATGCTCTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp ATTTACAGCCTCCACAGTTGGAGTGGCTGGAGATACAGAGTTGGGACGACCCCTGAGTCTGGGATGGGGTaGATAATGAAGGATACCTGG +
Preference number: 2 (lower is better)
Translates to: IYSLHSWSGWRYRVGTTPESGMG*IMKDTW
Trigger: CCAGGTATCCTTCATTATCCACCCCATCCCAGACTC...AGGGGTCGTCCCAACTCTGTATCTCCAGCCACTCCAACTGTGGAGGCTGTAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR-3UTR GCA 90 bp CCAGTTATGAGTAAGACCAGAACAATCCCTTTCCTCCGACAGTCCCACGTTTGCAAGGATACCTGGGGTTaGAGAAGTGGGGTGGGAATC +
Preference number: 2 (lower is better)
Translates to: PVMSKTRTIPFLRQSHVCKDTWG*RSGVGI
Trigger: GATTCCCACCCCACTTCTGCAACCCCAGGTATCCTT...GCAAACGTGGGACTGTCGGAGGAAAGGGATTGTTCTGGTCTTACTCATAACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp ACACTGGTAAGAAATGCAGATTGGCAATCATGTACATCTCTGATTAAAACAACAGGCCAGGGTGGGCAGTaGCCTGAGCCCGGCAGCTGG +
Preference number: 2 (lower is better)
Translates to: TLVRNADWQSCTSLIKTTGQGGQ*PEPGSW
Trigger: CCAGCTGCCGGGCTCAGGCCACTGCCCACCCTGGCC...TGTTGTTTTAATCAGAGATGTACATGATTGCCAATCTGCATTTCTTACCAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp TCACATAACCAACACAATTTGCTAGGCCAAAGTCTTCACGGGCAATCCCTGGGGAATATATATCAGCCCTaGGCACTCTCGCCCTGCTGC +
Preference number: 2 (lower is better)
Translates to: SHNQHNLLGQSLHGQSLGNIYQP*ALSPCC
Trigger: GCAGCAGGGCGAGAGTGCCCAGGGCTGATATATATT...CCCCAGGGATTGCCCGTGAAGACTTTGGCCTAGCAAATTGTGTTGGTTATGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp GGCCAGTCCATAAAGGTGGCAGTGGGGTCTTCAAACCACTGTTTCTATTCCAGAAATATATATCAGCCCTaGGCACTCTCGCCCTGCTGC +
Preference number: 2 (lower is better)
Translates to: GQSIKVAVGSSNHCFYSRNIYQP*ALSPCC
Trigger: GCAGCAGGGCGAGAGTGCCCAGGGCTGATATATATT...TCTGGAATAGAAACAGTGGTTTGAAGACCCCACTGCCACCTTTATGGACTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR-3UTR TCA 90 bp TTTATGCACAATCAAGTTTGTGAGGCACCGCTGCAGACTTCTGAGTGCAGGAATTCCCCTCAGTGGCTTTaGAGGCAGGTGTCCTTGAAG +
Preference number: 2 (lower is better)
Translates to: FMHNQVCEAPLQTSECRNSPQWL*RQVSLK
Trigger: CTTCAAGGACACCTGCCTTCAAAGCCACTGAGGGGA...ATTCCTGCACTCAGAAGTCTGCAGCGGTGCCTCACAAACTTGATTGTGCATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR TCA 90 bp ACAAGATCCCCAGTGATTTTTATGCACAATCAAGTTTGTGAGGCACCGCTGCAGTCCCCTCAGTGGCTTTaGAGGCAGGTGTCCTTGAAG +
Preference number: 2 (lower is better)
Translates to: TRSPVIFMHNQVCEAPLQSPQWL*RQVSLK
Trigger: CTTCAAGGACACCTGCCTTCAAAGCCACTGAGGGGA...CTGCAGCGGTGCCTCACAAACTTGATTGTGCATAAAAATCACTGGGGATCTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR GCA 90 bp GCCTGTGTCTTTTATTGGAAAAGCTTTCCCAGAAGCCCAGGTAGACTTCCTCTTAGCAGGAGGGCTGGGTaGTTGGAAGGAAAACCTAGG +
Preference number: 2 (lower is better)
Translates to: ACVFYWKSFPRSPGRLPLSRRAG*LEGKPR
Trigger: CCTAGGTTTTCCTTCCAAGCACCCAGCCCTCCTGCT...AAGAGGAAGTCTACCTGGGCTTCTGGGAAAGCTTTTCCAATAAAAGACACAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR-3UTR GCA 90 bp TTTATGCACAATCAAGTTTGTGAGGCACCGCTGCAGACTTCTGAGTGCAGGAATAGCAGGAGGGCTGGGTaGTTGGAAGGAAAACCTAGG +
Preference number: 2 (lower is better)
Translates to: FMHNQVCEAPLQTSECRNSRRAG*LEGKPR
Trigger: CCTAGGTTTTCCTTCCAAGCACCCAGCCCTCCTGCT...ATTCCTGCACTCAGAAGTCTGCAGCGGTGCCTCACAAACTTGATTGTGCATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp ACAAGATCCCCAGTGATTTTTATGCACAATCAAGTTTGTGAGGCACCGCTGCAGGAGAGCCAGGCCCTCTaGGGTGACACATTTCTACAG +
Preference number: 2 (lower is better)
Translates to: TRSPVIFMHNQVCEAPLQESQAL*GDTFLQ
Trigger: CTGTAGAAATGTGTCACCCCAGAGGGCCTGGCTCTC...CTGCAGCGGTGCCTCACAAACTTGATTGTGCATAAAAATCACTGGGGATCTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp TCAGCTTCCCCATCTCTAAAATGGGAATGCCACCTGGCTCACAAGACAGTTATAGAGAGCCAGGCCCTCTaGGGTGACACATTTCTACAG +
Preference number: 2 (lower is better)
Translates to: SASPSLKWECHLAHKTVIESQAL*GDTFLQ
Trigger: CTGTAGAAATGTGTCACCCCAGAGGGCCTGGCTCTC...TATAACTGTCTTGTGAGCCAGGTGGCATTCCCATTTTAGAGATGGGGAAGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464064.5
3UTR-3UTR CCA 90 bp CAACACTCACATAACCAACACAATTTGCTAGGCCAAAGTCTTCACGGGCAATCCAGAAAGCTCCTGTGCTaGGCTCTGAACCCCTTGCAG +
Preference number: 2 (lower is better)
Translates to: QHSHNQHNLLGQSLHGQSRKLLC*ALNPLQ
Trigger: CTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCT...GGATTGCCCGTGAAGACTTTGGCCTAGCAAATTGTGTTGGTTATGTGAGTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp GTGATCTTTATTTTAGGGATTGTGCATCTTCAGTGTAACCCTCACCTGGCAGACCCTGGTGGGAAGGCCTaGGCAGAACAGAAGGCTTGT +
Preference number: 2 (lower is better)
Translates to: VIFILGIVHLQCNPHLADPGGKA*AEQKAC
Trigger: ACAAGCCTTCTGTTCTGCCCAGGCCTTCCCACCAGG...GTCTGCCAGGTGAGGGTTACACTGAAGATGCACAATCCCTAAAATAAAGATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp ATTTACAGCCTCCACAGTTGGAGTGGCTGGAGATACAGAGTTGGGACGACCCCTAGTGGCAGCTATCTGTaGCAGTTTTGGGAAAGTGAA +
Preference number: 2 (lower is better)
Translates to: IYSLHSWSGWRYRVGTTPSGSYL*QFWESE
Trigger: TTCACTTTCCCAAAACTGCCACAGATAGCTGCCACT...AGGGGTCGTCCCAACTCTGTATCTCCAGCCACTCCAACTGTGGAGGCTGTAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp GCCCAGGGAGGTGTTAGCCATGCCTGTGTCTTTTATTGGAAAAGCTTTCCCAGATTTACAGCCCTGTGCTaGCAGCACACACAGGAAAAG +
Preference number: 2 (lower is better)
Translates to: AQGGVSHACVFYWKSFPRFTALC*QHTQEK
Trigger: CTTTTCCTGTGTGTGCTGCCAGCACAGGGCTGTAAA...TCTGGGAAAGCTTTTCCAATAAAAGACACAGGCATGGCTAACACCTCCCTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR-3UTR TCA 90 bp CCCTCAGTGGCTTTGAAGGCAGGTGTCCTTGAAGCTAAGCTCTGCTGGCTGCAGATCTCCCAGATCTATTaGGTTAGAAGCTGTATTAAC +
Preference number: 2 (lower is better)
Translates to: PSVALKAGVLEAKLCWLQISQIY*VRSCIN
Trigger: GTTAATACAGCTTCTAACTCAATAGATCTGGGAGAT...CTGCAGCCAGCAGAGCTTAGCTTCAAGGACACCTGCCTTCAAAGCCACTGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR TCA 90 bp CACAGCATGGTCCTCACACCAGCAGCCTCCGCCTTACCTGGGAGCTTGTTAGAAATCTCCCAGATCTATTaGGTTAGAAGCTGTATTAAC +
Preference number: 2 (lower is better)
Translates to: HSMVLTPAASALPGSLLEISQIY*VRSCIN
Trigger: GTTAATACAGCTTCTAACTCAATAGATCTGGGAGAT...TTCTAACAAGCTCCCAGGTAAGGCGGAGGCTGCTGGTGTGAGGACCATGCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR TCA 90 bp TTTATGCACAATCAAGTTTGTGAGGCACCGCTGCAGACTTCTGAGTGCAGGAATAAGGACCTAGCAAAGTaGATGGCAGAGGGAGGACTC +
Preference number: 2 (lower is better)
Translates to: FMHNQVCEAPLQTSECRNKDLAK*MAEGGL
Trigger: GAGTCCTCCCTCTGCCATTCACTTTGCTAGGTCCTT...ATTCCTGCACTCAGAAGTCTGCAGCGGTGCCTCACAAACTTGATTGTGCATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464064.5
3UTR-3UTR GCA 90 bp GTGATCTTTATTTTAGGGATTGTGCATCTTCAGTGTAACCCTCACCTGGCAGACCAGAGAAAGCTCCTGTaGTGGGCTCTGAACCCCTTG +
Preference number: 2 (lower is better)
Translates to: VIFILGIVHLQCNPHLADQRKLL*WALNPL
Trigger: CAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTG...GTCTGCCAGGTGAGGGTTACACTGAAGATGCACAATCCCTAAAATAAAGATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR-3UTR GCA 90 bp TCAAAGAGCATGCCAGTGGCAGCTATCTGTGGCAGTTTTGGGAAAGTGAAAGGACTTCCTCCTCAATTCTaGCAGAGAAAGCTCCTGTGC +
Preference number: 2 (lower is better)
Translates to: SKSMPVAAICGSFGKVKGLPPQF*QRKLLC
Trigger: GCACAGGAGCTTTCTCTGGCAGAATTGAGGAGGAAG...TCCTTTCACTTTCCCAAAACTGCCACAGATAGCTGCCACTGGCATGCTCTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR-3UTR GCA 90 bp CAGGAATCAAAGAGCATGCCAGTGGCAGCTATCTGTGGCAGTTTTGGGAAAGTGCTTGAAGCTAAGCTCTaGTGGCTGCAGGTAAAACCA +
Preference number: 2 (lower is better)
Translates to: QESKSMPVAAICGSFGKVLEAKL*WLQVKP
Trigger: TGGTTTTACCTGCAGCCAGCAGAGCTTAGCTTCAAG...CACTTTCCCAAAACTGCCACAGATAGCTGCCACTGGCATGCTCTTTGATTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR-3UTR GCA 90 bp TCACATAACCAACACAATTTGCTAGGCCAAAGTCTTCACGGGCAATCCCTGGGGCTTGAAGCTAAGCTCTaGTGGCTGCAGGTAAAACCA +
Preference number: 2 (lower is better)
Translates to: SHNQHNLLGQSLHGQSLGLEAKL*WLQVKP
Trigger: TGGTTTTACCTGCAGCCAGCAGAGCTTAGCTTCAAG...CCCCAGGGATTGCCCGTGAAGACTTTGGCCTAGCAAATTGTGTTGGTTATGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR GCA 90 bp CAACACTCACATAACCAACACAATTTGCTAGGCCAAAGTCTTCACGGGCAATCCAAGGATACCTGGGGTTaGAGAAGTGGGGTGGGAATC +
Preference number: 2 (lower is better)
Translates to: QHSHNQHNLLGQSLHGQSKDTWG*RSGVGI
Trigger: GATTCCCACCCCACTTCTGCAACCCCAGGTATCCTT...GGATTGCCCGTGAAGACTTTGGCCTAGCAAATTGTGTTGGTTATGTGAGTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR GCA 90 bp CCAGTTATGAGTAAGACCAGAACAATCCCTTTCCTCCGACAGTCCCACGTTTGCAGGAATCAAAGAGCATaGCAGTGGCAGCTATCTGTG +
Preference number: 2 (lower is better)
Translates to: PVMSKTRTIPFLRQSHVCRNQRA*QWQLSV
Trigger: CACAGATAGCTGCCACTGGCATGCTCTTTGATTCCT...GCAAACGTGGGACTGTCGGAGGAAAGGGATTGTTCTGGTCTTACTCATAACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR-3UTR GCA 90 bp TTTATGCACAATCAAGTTTGTGAGGCACCGCTGCAGACTTCTGAGTGCAGGAATCCTGGGGATGAGTTTTaGTATCAGCCTGGTAGCTGG +
Preference number: 2 (lower is better)
Translates to: FMHNQVCEAPLQTSECRNPGDEF*YQPGSW
Trigger: CCAGCTACCAGGCTGATAGCAAAACTCATCCCCAGG...ATTCCTGCACTCAGAAGTCTGCAGCGGTGCCTCACAAACTTGATTGTGCATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464064.5
3UTR-3UTR TCA 90 bp CTAGAATTGCATCGTAACAGTGTGGTCACACTGGTAAGAAATGCAGATTGGCAACCAGGCCCTCTGGGGTaGCACATTTCTACAGAAGCA +
Preference number: 2 (lower is better)
Translates to: LELHRNSVVTLVRNADWQPGPLG*HISTEA
Trigger: TGCTTCTGTAGAAATGTGTCACCCCAGAGGGCCTGG...TTGCCAATCTGCATTTCTTACCAGTGTGACCACACTGTTACGATGCAATTCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR GCA 90 bp ACAAGATCCCCAGTGATTTTTATGCACAATCAAGTTTGTGAGGCACCGCTGCAGCTTCCTCCTCAATTCTaGCAGAGAAAGCTCCTGTGC +
Preference number: 2 (lower is better)
Translates to: TRSPVIFMHNQVCEAPLQLPPQF*QRKLLC
Trigger: GCACAGGAGCTTTCTCTGGCAGAATTGAGGAGGAAG...CTGCAGCGGTGCCTCACAAACTTGATTGTGCATAAAAATCACTGGGGATCTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR GCA 90 bp CCAGTTATGAGTAAGACCAGAACAATCCCTTTCCTCCGACAGTCCCACGTTTGCGAAAGTGAAAGGAGATaGTATTCCAGCACTGCTCTG +
Preference number: 2 (lower is better)
Translates to: PVMSKTRTIPFLRQSHVCESERR*YSSTAL
Trigger: CAGAGCAGTGCTGGAATAGCATCTCCTTTCACTTTC...GCAAACGTGGGACTGTCGGAGGAAAGGGATTGTTCTGGTCTTACTCATAACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp CTAGAATTGCATCGTAACAGTGTGGTCACACTGGTAAGAAATGCAGATTGGCAAAGAAAGCTCCTGTGCTaGGCTCTGAACCCCTTGCAG +
Preference number: 2 (lower is better)
Translates to: LELHRNSVVTLVRNADWQRKLLC*ALNPLQ
Trigger: CTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCT...TTGCCAATCTGCATTTCTTACCAGTGTGACCACACTGTTACGATGCAATTCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp GCCCAGGGAGGTGTTAGCCATGCCTGTGTCTTTTATTGGAAAAGCTTTCCCAGACATTCAGGAGCCTCTTaGAGCTTGACTTATACACAC +
Preference number: 2 (lower is better)
Translates to: AQGGVSHACVFYWKSFPRHSGAS*SLTYTH
Trigger: GTGTGTATAAGTCAAGCTCCAAGAGGCTCCTGAATG...TCTGGGAAAGCTTTTCCAATAAAAGACACAGGCATGGCTAACACCTCCCTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR-3UTR TCA 90 bp CTAGAATTGCATCGTAACAGTGTGGTCACACTGGTAAGAAATGCAGATTGGCAAATAAACTCGGGGGCGTaGTCCTCTTCCTTCTCTGGT +
Preference number: 2 (lower is better)
Translates to: LELHRNSVVTLVRNADWQINSGA*SSSFSG
Trigger: ACCAGAGAAGGAAGAGGATCACGCCCCCGAGTTTAT...TTGCCAATCTGCATTTCTTACCAGTGTGACCACACTGTTACGATGCAATTCTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464064.5
3UTR-3UTR GCA 90 bp CTAGAATTGCATCGTAACAGTGTGGTCACACTGGTAAGAAATGCAGATTGGCAAAAGGATACCTGGGGTTaGAGAAGTGGGGTGGGAATC +
Preference number: 2 (lower is better)
Translates to: LELHRNSVVTLVRNADWQKDTWG*RSGVGI
Trigger: GATTCCCACCCCACTTCTGCAACCCCAGGTATCCTT...TTGCCAATCTGCATTTCTTACCAGTGTGACCACACTGTTACGATGCAATTCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp GTGATCTTTATTTTAGGGATTGTGCATCTTCAGTGTAACCCTCACCTGGCAGACAGCCTCCGCCTTACCTaGGAGCTTGTTAGAAATGCA +
Preference number: 2 (lower is better)
Translates to: VIFILGIVHLQCNPHLADSLRLT*ELVRNA
Trigger: TGCATTTCTAACAAGCTCCCAGGTAAGGCGGAGGCT...GTCTGCCAGGTGAGGGTTACACTGAAGATGCACAATCCCTAAAATAAAGATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR-3UTR GCA 90 bp TCACATAACCAACACAATTTGCTAGGCCAAAGTCTTCACGGGCAATCCCTGGGGCACACTGGTAAGAAATaGAGATTGGCAATCATGTAC +
Preference number: 2 (lower is better)
Translates to: SHNQHNLLGQSLHGQSLGHTGKK*RLAIMY
Trigger: GTACATGATTGCCAATCTGCATTTCTTACCAGTGTG...CCCCAGGGATTGCCCGTGAAGACTTTGGCCTAGCAAATTGTGTTGGTTATGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR GCA 90 bp TTTATGCACAATCAAGTTTGTGAGGCACCGCTGCAGACTTCTGAGTGCAGGAATTCTCTAAAATGGGAATaGCACCTGGCTCACAAGACA +
Preference number: 2 (lower is better)
Translates to: FMHNQVCEAPLQTSECRNSLKWE*HLAHKT
Trigger: TGTCTTGTGAGCCAGGTGGCATTCCCATTTTAGAGA...ATTCCTGCACTCAGAAGTCTGCAGCGGTGCCTCACAAACTTGATTGTGCATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464064.5
3UTR-3UTR CCA 90 bp CAACACTCACATAACCAACACAATTTGCTAGGCCAAAGTCTTCACGGGCAATCCATCCTCTTCCTTCTCTaGTGGTTTTTCCAGCTGAAG +
Preference number: 2 (lower is better)
Translates to: QHSHNQHNLLGQSLHGQSILFLL*WFFQLK
Trigger: CTTCAGCTGGAAAAACCACCAGAGAAGGAAGAGGAT...GGATTGCCCGTGAAGACTTTGGCCTAGCAAATTGTGTTGGTTATGTGAGTGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464064.5
3UTR-3UTR CCA 90 bp CTAGAATTGCATCGTAACAGTGTGGTCACACTGGTAAGAAATGCAGATTGGCAACTTCGCTGGTCAGTGTaGCAATTCTCCGCAGGTTTT +
Preference number: 2 (lower is better)
Translates to: LELHRNSVVTLVRNADWQLRWSV*QFSAGF
Trigger: AAAACCTGCGGAGAATTGCCACACTGACCAGCGAAG...TTGCCAATCTGCATTTCTTACCAGTGTGACCACACTGTTACGATGCAATTCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464064.5
3UTR-3UTR TCA 90 bp CAGGAATCAAAGAGCATGCCAGTGGCAGCTATCTGTGGCAGTTTTGGGAAAGTGATCTCCCAGATCTATTaGGTTAGAAGCTGTATTAAC +
Preference number: 2 (lower is better)
Translates to: QESKSMPVAAICGSFGKVISQIY*VRSCIN
Trigger: GTTAATACAGCTTCTAACTCAATAGATCTGGGAGAT...CACTTTCCCAAAACTGCCACAGATAGCTGCCACTGGCATGCTCTTTGATTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR-3UTR GCA 90 bp ACACTGGTAAGAAATGCAGATTGGCAATCATGTACATCTCTGATTAAAACAACACTGCAGACTTCTGAGTaGAGGAATGCGGCAGCCCTG +
Preference number: 2 (lower is better)
Translates to: TLVRNADWQSCTSLIKTTLQTSE*RNAAAL
Trigger: CAGGGCTGCCGCATTCCTGCACTCAGAAGTCTGCAG...TGTTGTTTTAATCAGAGATGTACATGATTGCCAATCTGCATTTCTTACCAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CCA 90 bp ACACTGGTAAGAAATGCAGATTGGCAATCATGTACATCTCTGATTAAAACAACAGTTGCAGAAGTGGGGTaGGAATCCCTGGGGCATCAG +
Preference number: 2 (lower is better)
Translates to: TLVRNADWQSCTSLIKTTVAEVG*ESLGHQ
Trigger: CTGATGCCCCAGGGATTCCCACCCCACTTCTGCAAC...TGTTGTTTTAATCAGAGATGTACATGATTGCCAATCTGCATTTCTTACCAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR TCA 90 bp ACACTGGTAAGAAATGCAGATTGGCAATCATGTACATCTCTGATTAAAACAACACCAGGCCCTCTGGGGTaGCACATTTCTACAGAAGCA +
Preference number: 2 (lower is better)
Translates to: TLVRNADWQSCTSLIKTTPGPLG*HISTEA
Trigger: TGCTTCTGTAGAAATGTGTCACCCCAGAGGGCCTGG...TGTTGTTTTAATCAGAGATGTACATGATTGCCAATCTGCATTTCTTACCAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR GCA 90 bp GTGATCTTTATTTTAGGGATTGTGCATCTTCAGTGTAACCCTCACCTGGCAGACCACACTGGTAAGAAATaGAGATTGGCAATCATGTAC +
Preference number: 2 (lower is better)
Translates to: VIFILGIVHLQCNPHLADHTGKK*RLAIMY
Trigger: GTACATGATTGCCAATCTGCATTTCTTACCAGTGTG...GTCTGCCAGGTGAGGGTTACACTGAAGATGCACAATCCCTAAAATAAAGATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR-3UTR TCA 90 bp ACACTGGTAAGAAATGCAGATTGGCAATCATGTACATCTCTGATTAAAACAACAGGGGGATTCCTACTCTaGAAACCTGTGGAGTTTGGA +
Preference number: 2 (lower is better)
Translates to: TLVRNADWQSCTSLIKTTGGFLL*KPVEFG
Trigger: TCCAAACTCCACAGGTTTTCAGAGTAGGAATCCCCC...TGTTGTTTTAATCAGAGATGTACATGATTGCCAATCTGCATTTCTTACCAGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464064.5
3UTR-3UTR TCA 90 bp CTAGAATTGCATCGTAACAGTGTGGTCACACTGGTAAGAAATGCAGATTGGCAAATCTCCCAGATCTATTaGGTTAGAAGCTGTATTAAC +
Preference number: 2 (lower is better)
Translates to: LELHRNSVVTLVRNADWQISQIY*VRSCIN
Trigger: GTTAATACAGCTTCTAACTCAATAGATCTGGGAGAT...TTGCCAATCTGCATTTCTTACCAGTGTGACCACACTGTTACGATGCAATTCTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CAA 90 bp CCCAGGGCTGCCAGGTACAGAAGGGCTGAAGGAGGCTGTCCAGGCCAGGGTGGGTGGGCTCTGAACCCCTaGCAGGGAGGGGTGCAGGTT +
Preference number: 3 (lower is better)
Translates to: PRAARYRRAEGGCPGQGGWALNP*QGGVQV
Trigger: AACCTGCACCCCTCCCTGCAAGGGGTTCAGAGCCCA...CCCACCCTGGCCTGGACAGCCTCCTTCAGCCCTTCTGTACCTGGCAGCCCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR CCA 72 bp TCAGCCCTGGGCACTCTCGCCCTGCTGCTCACAGCATaGTCCTCACACCAGCAGCCTCCGCCTTACCTGGGA +
Preference number: 3 (lower is better)
Translates to: SALGTLALLLTA*SSHQQPPPYLG
Trigger: TCCCAGGTAAGGCGGAGGCTGCTGGTGTGAGGACCATGCTGTGAGCAGCAGGGCGAGAGTGCCCAGGGCTGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR CCA 72 bp CGCTGCAGACTTCTGAGTGCAGGAATGCGGCAGCCCTaGGTAGGTGTGGTTAGAAGGCCTGGACGGGGAGGC +
Preference number: 3 (lower is better)
Translates to: RCRLLSAGMRQP*VGVVRRPGRGG
Trigger: GCCTCCCCGTCCAGGCCTTCTAACCACACCTACCCAGGGCTGCCGCATTCCTGCACTCAGAAGTCTGCAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CAA 90 bp GTCTTTGTTAGTCCCCGCCCACCTGGCCGGGATGCCAGCAACAAGGCCATCTGCTGCAGGTTATCCCTCTaGGAGCAGGAGGGCTGGGTG +
Preference number: 3 (lower is better)
Translates to: VFVSPRPPGRDASNKAICCRLSL*EQEGWV
Trigger: CACCCAGCCCTCCTGCTCCAAGAGGGATAACCTGCA...GCAGATGGCCTTGTTGCTGGCATCCCGGCCAGGTGGGCGGGGACTAACAAAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR CCA 72 bp GAACCAAGGTCGTCTGCACGGCTGCCCTGGAGGGCGTaGTGCTTGAGGTCCCTTCTACCTCTGGGGCTTCAT +
Preference number: 3 (lower is better)
Translates to: EPRSSARLPWRA*CLRSLLPLGLH
Trigger: ATGAAGCCCCAGAGGTAGAAGGGACCTCAAGCACCACGCCCTCCAGGGCAGCCGTGCAGACGACCTTGGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR-3UTR CAA 90 bp GTCTTTGTTAGTCCCCGCCCACCTGGCCGGGATGCCAGCAACAAGGCCATCTGCAGGAGGGCTGGGTGCTaGGAAGGAAAACCTAGGAGC +
Preference number: 3 (lower is better)
Translates to: VFVSPRPPGRDASNKAICRRAGC*EGKPRS
Trigger: GCTCCTAGGTTTTCCTTCCAAGCACCCAGCCCTCCT...GCAGATGGCCTTGTTGCTGGCATCCCGGCCAGGTGGGCGGGGACTAACAAAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR CCA 72 bp AGGCCCTCTGGGGTGACACATTTCTACAGAAGCAGGTaGGAACATCACAGACGTCCCAGGGCCTGGGGCCCA +
Preference number: 3 (lower is better)
Translates to: RPSGVTHFYRSR*EHHRRPRAWGP
Trigger: TGGGCCCCAGGCCCTGGGACGTCTGTGATGTTCCCACCTGCTTCTGTAGAAATGTGTCACCCCAGAGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR CCA 72 bp GACTTGTTGCCTCCATGGAGCACCTCTGGGGACCACTaGGTGAATCCCCAGGCATTCCCTTGGAGAGCCCTC +
Preference number: 3 (lower is better)
Translates to: DLLPPWSTSGDH*VNPQAFPWRAL
Trigger: GAGGGCTCTCCAAGGGAATGCCTGGGGATTCACCCAGTGGTCCCCAGAGGTGCTCCATGGAGGCAACAAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR TCA 72 bp TGCAGTCTGCCCTGCCCTTCCTCCCCTCAGTGGCTTTaGAGGCAGGTGTCCTTGAAGCTAAGCTCTGCTGGC +
Preference number: 3 (lower is better)
Translates to: CSLPCPSSPQWL*RQVSLKLSSAG
Trigger: GCCAGCAGAGCTTAGCTTCAAGGACACCTGCCTTCAAAGCCACTGAGGGGAGGAAGGGCAGGGCAGACTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR CCA 72 bp TCTGGGGACCACTGGGTGAATCCCCAGGCATTCCCTTaGAGAGCCCTCGTCCATCTGAGACCCTCTGTCTTG +
Preference number: 3 (lower is better)
Translates to: SGDHWVNPQAFP*RALVHLRPSVL
Trigger: CAAGACAGAGGGTCTCAGATGGACGAGGGCTCTCCAAGGGAATGCCTGGGGATTCACCCAGTGGTCCCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR-3UTR CAA 90 bp GTGGGAAGGCCTGGGCAGAACAGAAGGCTTGTCAAGTCAGAGGGCCACCTCTTCAGGAGGGCTGGGTGCTaGGAAGGAAAACCTAGGAGC +
Preference number: 3 (lower is better)
Translates to: VGRPGQNRRLVKSEGHLFRRAGC*EGKPRS
Trigger: GCTCCTAGGTTTTCCTTCCAAGCACCCAGCCCTCCT...GAAGAGGTGGCCCTCTGACTTGACAAGCCTTCTGTTCTGCCCAGGCCTTCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CAA 90 bp CCAGCAGCCTCCGCCTTACCTGGGAGCTTGTTAGAAATGCAGGATCTCCCAGATTGGGCTCTGAACCCCTaGCAGGGAGGGGTGCAGGTT +
Preference number: 3 (lower is better)
Translates to: PAASALPGSLLEMQDLPDWALNP*QGGVQV
Trigger: AACCTGCACCCCTCCCTGCAAGGGGTTCAGAGCCCA...ATCTGGGAGATCCTGCATTTCTAACAAGCTCCCAGGTAAGGCGGAGGCTGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CAA 90 bp TCAATTCTGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGAGGAGGGCTGGGTGCTaGGAAGGAAAACCTAGGAGC +
Preference number: 3 (lower is better)
Translates to: SILPEKAPVLGSEPLAGRRRAGC*EGKPRS
Trigger: GCTCCTAGGTTTTCCTTCCAAGCACCCAGCCCTCCT...CCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CAA 90 bp TCGGAGATTCCTGGTGGGAAGGCCTGGGCAGAACAGAAGGCTTGTCAAGTCAGATGCAGGTTATCCCTCTaGGAGCAGGAGGGCTGGGTG +
Preference number: 3 (lower is better)
Translates to: SEIPGGKAWAEQKACQVRCRLSL*EQEGWV
Trigger: CACCCAGCCCTCCTGCTCCAAGAGGGATAACCTGCA...TCTGACTTGACAAGCCTTCTGTTCTGCCCAGGCCTTCCCACCAGGAATCTCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CAA 90 bp CAATTCTGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGGCCTAAACAGCTGTCTTaGTTAGTCCCCGCCCACCTG +
Preference number: 3 (lower is better)
Translates to: QFCQRKLLCWALNPLQGGPKQLS*LVPAHL
Trigger: CAGGTGGGCGGGGACTAACAAAGACAGCTGTTTAGG...CCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CAA 90 bp GCTCACAGCATGGTCCTCACACCAGCAGCCTCCGCCTTACCTGGGAGCTTGTTACCTAAACAGCTGTCTTaGTTAGTCCCCGCCCACCTG +
Preference number: 3 (lower is better)
Translates to: AHSMVLTPAASALPGSLLPKQLS*LVPAHL
Trigger: CAGGTGGGCGGGGACTAACAAAGACAGCTGTTTAGG...TAACAAGCTCCCAGGTAAGGCGGAGGCTGCTGGTGTGAGGACCATGCTGTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR CCA 72 bp ATGGGTGAATTCACTGGAGTTGGCCCAGCTAGGGGTTaGGTCTCAGGTGACAGAGGCCGGGGATTCAGACTC +
Preference number: 3 (lower is better)
Translates to: MGEFTGVGPARG*VSGDRGRGFRL
Trigger: GAGTCTGAATCCCCGGCCTCTGTCACCTGAGACCCAACCCCTAGCTGGGCCAACTCCAGTGAATTCACCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR-3UTR CAA 90 bp GCTTTGAAGGCAGGTGTCCTTGAAGCTAAGCTCTGCTGGCTGCAGGTAAAACCATGGGCTCTGAACCCCTaGCAGGGAGGGGTGCAGGTT +
Preference number: 3 (lower is better)
Translates to: ALKAGVLEAKLCWLQVKPWALNP*QGGVQV
Trigger: AACCTGCACCCCTCCCTGCAAGGGGTTCAGAGCCCA...TGGTTTTACCTGCAGCCAGCAGAGCTTAGCTTCAAGGACACCTGCCTTCAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CAA 90 bp ATTTACAGCCTCCACAGTTGGAGTGGCTGGAGATACAGAGTTGGGACGACCCCTTCCCCAGGCATTCCCTaGGAGAGCCCTCGTCCATCT +
Preference number: 3 (lower is better)
Translates to: IYSLHSWSGWRYRVGTTPSPGIP*ESPRPS
Trigger: AGATGGACGAGGGCTCTCCAAGGGAATGCCTGGGGA...AGGGGTCGTCCCAACTCTGTATCTCCAGCCACTCCAACTGTGGAGGCTGTAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR-3UTR CAA 90 bp GTCCACAGGAGGTGGGGGCCAGCGATGGCTTCAGGGGTGATATTTCCAATATATAGGAGGGCTGGGTGCTaGGAAGGAAAACCTAGGAGC +
Preference number: 3 (lower is better)
Translates to: VHRRWGPAMASGVIFPIYRRAGC*EGKPRS
Trigger: GCTCCTAGGTTTTCCTTCCAAGCACCCAGCCCTCCT...ATATATTGGAAATATCACCCCTGAAGCCATCGCTGGCCCCCACCTCCTGTGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CAA 90 bp GCTTTGAAGGCAGGTGTCCTTGAAGCTAAGCTCTGCTGGCTGCAGGTAAAACCATGCAGGTTATCCCTCTaGGAGCAGGAGGGCTGGGTG +
Preference number: 3 (lower is better)
Translates to: ALKAGVLEAKLCWLQVKPCRLSL*EQEGWV
Trigger: CACCCAGCCCTCCTGCTCCAAGAGGGATAACCTGCA...TGGTTTTACCTGCAGCCAGCAGAGCTTAGCTTCAAGGACACCTGCCTTCAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CAA 90 bp TCACATAACCAACACAATTTGCTAGGCCAAAGTCTTCACGGGCAATCCCTGGGGTGGGCTCTGAACCCCTaGCAGGGAGGGGTGCAGGTT +
Preference number: 3 (lower is better)
Translates to: SHNQHNLLGQSLHGQSLGWALNP*QGGVQV
Trigger: AACCTGCACCCCTCCCTGCAAGGGGTTCAGAGCCCA...CCCCAGGGATTGCCCGTGAAGACTTTGGCCTAGCAAATTGTGTTGGTTATGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR GCA 72 bp GTGGCTTTGAAGGCAGGTGTCCTTGAAGCTAAGCTCTaGTGGCTGCAGGTAAAACCACAGGTGGGGGAGTTC +
Preference number: 3 (lower is better)
Translates to: VALKAGVLEAKL*WLQVKPQVGEF
Trigger: GAACTCCCCCACCTGTGGTTTTACCTGCAGCCAGCAGAGCTTAGCTTCAAGGACACCTGCCTTCAAAGCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR CCA 72 bp CAGCATGGTCCTCACACCAGCAGCCTCCGCCTTACCTaGGAGCTTGTTAGAAATGCAGGATCTCCCAGATCT +
Preference number: 3 (lower is better)
Translates to: QHGPHTSSLRLT*ELVRNAGSPRS
Trigger: AGATCTGGGAGATCCTGCATTTCTAACAAGCTCCCAGGTAAGGCGGAGGCTGCTGGTGTGAGGACCATGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR CCA 72 bp CAAAGTGAATGGCAGAGGGAGGACTCAGGCCAGGAGTaGACTCTTAGTCCAGTGCTCTGTCTGCTGATCCTC +
Preference number: 3 (lower is better)
Translates to: QSEWQREDSGQE*TLSPVLCLLIL
Trigger: GAGGATCAGCAGACAGAGCACTGGACTAAGAGTCCACTCCTGGCCTGAGTCCTCCCTCTGCCATTCACTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464064.5
3UTR-3UTR CAA 90 bp CAGGAATCAAAGAGCATGCCAGTGGCAGCTATCTGTGGCAGTTTTGGGAAAGTGTGCAGGTTATCCCTCTaGGAGCAGGAGGGCTGGGTG +
Preference number: 3 (lower is better)
Translates to: QESKSMPVAAICGSFGKVCRLSL*EQEGWV
Trigger: CACCCAGCCCTCCTGCTCCAAGAGGGATAACCTGCA...CACTTTCCCAAAACTGCCACAGATAGCTGCCACTGGCATGCTCTTTGATTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR TCA 72 bp AGAGTGAAGTGGGTGGAGCTAGGGGGATTCCTACTCTaGAAACCTGTGGAGTTTGGACCAAGGGCCCACTCA +
Preference number: 3 (lower is better)
Translates to: RVKWVELGGFLL*KPVEFGPRAHS
Trigger: TGAGTGGGCCCTTGGTCCAAACTCCACAGGTTTTCAGAGTAGGAATCCCCCTAGCTCCACCCACTTCACTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464064.5
3UTR-3UTR CAA 90 bp ATTTACAGCCTCCACAGTTGGAGTGGCTGGAGATACAGAGTTGGGACGACCCCTGGAGCCTCTTGGAGCTaGACTTATACACACGCACAC +
Preference number: 3 (lower is better)
Translates to: IYSLHSWSGWRYRVGTTPGASWS*TYTHAH
Trigger: GTGTGCGTGTGTATAAGTCAAGCTCCAAGAGGCTCC...AGGGGTCGTCCCAACTCTGTATCTCCAGCCACTCCAACTGTGGAGGCTGTAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR GCA 72 bp ACCAGAACAATCCCTTTCCTCCGACAGTCCCACGTTTaGTTCCAGGAATCAAAGAGCATGCCAGTGGCAGCT +
Preference number: 3 (lower is better)
Translates to: TRTIPFLRQSHV*FQESKSMPVAA
Trigger: AGCTGCCACTGGCATGCTCTTTGATTCCTGGAAGCAAACGTGGGACTGTCGGAGGAAAGGGATTGTTCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR CCA 72 bp CACACAGGCGCAATATCTGCATTTACAGCCCTGTGCTaGCAGCACACACAGGAAAAGCACGACTTCAGTCAC +
Preference number: 3 (lower is better)
Translates to: HTGAISAFTALC*QHTQEKHDFSH
Trigger: GTGACTGAAGTCGTGCTTTTCCTGTGTGTGCTGCCAGCACAGGGCTGTAAATGCAGATATTGCGCCTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR-3UTR CAA 90 bp TTTATGCACAATCAAGTTTGTGAGGCACCGCTGCAGACTTCTGAGTGCAGGAATTGCAGGTTATCCCTCTaGGAGCAGGAGGGCTGGGTG +
Preference number: 3 (lower is better)
Translates to: FMHNQVCEAPLQTSECRNCRLSL*EQEGWV
Trigger: CACCCAGCCCTCCTGCTCCAAGAGGGATAACCTGCA...ATTCCTGCACTCAGAAGTCTGCAGCGGTGCCTCACAAACTTGATTGTGCATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CAA 90 bp GCCCAGGGAGGTGTTAGCCATGCCTGTGTCTTTTATTGGAAAAGCTTTCCCAGAGAAGGATACCTGGGGTaGCAGAAGTGGGGTGGGAAT +
Preference number: 3 (lower is better)
Translates to: AQGGVSHACVFYWKSFPREGYLG*QKWGGN
Trigger: ATTCCCACCCCACTTCTGCAACCCCAGGTATCCTTC...TCTGGGAAAGCTTTTCCAATAAAAGACACAGGCATGGCTAACACCTCCCTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR-3UTR CAA 90 bp TCACATAACCAACACAATTTGCTAGGCCAAAGTCTTCACGGGCAATCCCTGGGGGAAGGATACCTGGGGTaGCAGAAGTGGGGTGGGAAT +
Preference number: 3 (lower is better)
Translates to: SHNQHNLLGQSLHGQSLGEGYLG*QKWGGN
Trigger: ATTCCCACCCCACTTCTGCAACCCCAGGTATCCTTC...CCCCAGGGATTGCCCGTGAAGACTTTGGCCTAGCAAATTGTGTTGGTTATGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CAA 90 bp ACAAGATCCCCAGTGATTTTTATGCACAATCAAGTTTGTGAGGCACCGCTGCAGAGGAGGGCTGGGTGCTaGGAAGGAAAACCTAGGAGC +
Preference number: 3 (lower is better)
Translates to: TRSPVIFMHNQVCEAPLQRRAGC*EGKPRS
Trigger: GCTCCTAGGTTTTCCTTCCAAGCACCCAGCCCTCCT...CTGCAGCGGTGCCTCACAAACTTGATTGTGCATAAAAATCACTGGGGATCTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CAA 90 bp CTAGAATTGCATCGTAACAGTGTGGTCACACTGGTAAGAAATGCAGATTGGCAATGGGCTCTGAACCCCTaGCAGGGAGGGGTGCAGGTT +
Preference number: 3 (lower is better)
Translates to: LELHRNSVVTLVRNADWQWALNP*QGGVQV
Trigger: AACCTGCACCCCTCCCTGCAAGGGGTTCAGAGCCCA...TTGCCAATCTGCATTTCTTACCAGTGTGACCACACTGTTACGATGCAATTCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR GCA 72 bp GACAGTCCCACGTTTGCTTCCAGGAATCAAAGAGCATaGCAGTGGCAGCTATCTGTGGCAGTTTTGGGAAAG +
Preference number: 3 (lower is better)
Translates to: DSPTFASRNQRA*QWQLSVAVLGK
Trigger: CTTTCCCAAAACTGCCACAGATAGCTGCCACTGGCATGCTCTTTGATTCCTGGAAGCAAACGTGGGACTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR CCA 72 bp ACATTCTCAGCACGCCAGTCACATTCAGGAGCCTCTTaGAGCTTGACTTATACACACGCACACAGGCGCAAT +
Preference number: 3 (lower is better)
Translates to: TFSARQSHSGAS*SLTYTHAHRRN
Trigger: ATTGCGCCTGTGTGCGTGTGTATAAGTCAAGCTCCAAGAGGCTCCTGAATGTGACTGGCGTGCTGAGAATGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR CCA 72 bp GGAACAGTGAAAATCTGGATTTACAGCCTCCACAGTTaGAGTGGCTGGAGATACAGAGTTGGGACGACCCCT +
Preference number: 3 (lower is better)
Translates to: GTVKIWIYSLHS*SGWRYRVGTTP
Trigger: AGGGGTCGTCCCAACTCTGTATCTCCAGCCACTCCAACTGTGGAGGCTGTAAATCCAGATTTTCACTGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR CCA 72 bp GCCCAGGGAGGTGTTAGCCATGCCTGTGTCTTTTATTaGAAAAGCTTTCCCAGAAGCCCAGGTAGACTTCCT +
Preference number: 3 (lower is better)
Translates to: AQGGVSHACVFY*KSFPRSPGRLP
Trigger: AGGAAGTCTACCTGGGCTTCTGGGAAAGCTTTTCCAATAAAAGACACAGGCATGGCTAACACCTCCCTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR-3UTR CAA 90 bp CAACACTCACATAACCAACACAATTTGCTAGGCCAAAGTCTTCACGGGCAATCCCCTAAACAGCTGTCTTaGTTAGTCCCCGCCCACCTG +
Preference number: 3 (lower is better)
Translates to: QHSHNQHNLLGQSLHGQSPKQLS*LVPAHL
Trigger: CAGGTGGGCGGGGACTAACAAAGACAGCTGTTTAGG...GGATTGCCCGTGAAGACTTTGGCCTAGCAAATTGTGTTGGTTATGTGAGTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CAA 90 bp TTTATGCACAATCAAGTTTGTGAGGCACCGCTGCAGACTTCTGAGTGCAGGAATCCTAAACAGCTGTCTTaGTTAGTCCCCGCCCACCTG +
Preference number: 3 (lower is better)
Translates to: FMHNQVCEAPLQTSECRNPKQLS*LVPAHL
Trigger: CAGGTGGGCGGGGACTAACAAAGACAGCTGTTTAGG...ATTCCTGCACTCAGAAGTCTGCAGCGGTGCCTCACAAACTTGATTGTGCATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CAA 90 bp CAACACTCACATAACCAACACAATTTGCTAGGCCAAAGTCTTCACGGGCAATCCGAAGGATACCTGGGGTaGCAGAAGTGGGGTGGGAAT +
Preference number: 3 (lower is better)
Translates to: QHSHNQHNLLGQSLHGQSEGYLG*QKWGGN
Trigger: ATTCCCACCCCACTTCTGCAACCCCAGGTATCCTTC...GGATTGCCCGTGAAGACTTTGGCCTAGCAAATTGTGTTGGTTATGTGAGTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR CCA 72 bp TCTGTCTTGCTTCTCTTCACATGTCTGAACAACACATaGACCCGAGGGCTGCTTCTTTGGGGAAGTGGTGAT +
Preference number: 3 (lower is better)
Translates to: SVLLLFTCLNNT*TRGLLLWGSGD
Trigger: ATCACCACTTCCCCAAAGAAGCAGCCCTCGGGTCCATGTGTTGTTCAGACATGTGAAGAGAAGCAAGACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR TCA 72 bp AAGCACGACTTCAGTCACCCTCAAACCACCCAGTTATaGGTAAGACCAGAACAATCCCTTTCCTCCGACAGT +
Preference number: 3 (lower is better)
Translates to: KHDFSHPQTTQL*VRPEQSLSSDS
Trigger: ACTGTCGGAGGAAAGGGATTGTTCTGGTCTTACTCATAACTGGGTGGTTTGAGGGTGACTGAAGTCGTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR CCA 72 bp AAAGAGCATGCCAGTGGCAGCTATCTGTGGCAGTTTTaGGAAAGTGAAAGGAGATGCTATTCCAGCACTGCT +
Preference number: 3 (lower is better)
Translates to: KEHASGSYLWQF*ESERRCYSSTA
Trigger: AGCAGTGCTGGAATAGCATCTCCTTTCACTTTCCCAAAACTGCCACAGATAGCTGCCACTGGCATGCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR CCA 72 bp TGTCTGAACAACACATGGACCCGAGGGCTGCTTCTTTaGGGAAGTGGTGATCTTTATTTTAGGGATTGTGCA +
Preference number: 3 (lower is better)
Translates to: CLNNTWTRGLLL*GSGDLYFRDCA
Trigger: TGCACAATCCCTAAAATAAAGATCACCACTTCCCCAAAGAAGCAGCCCTCGGGTCCATGTGTTGTTCAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR-3UTR CAA 90 bp GTGATCTTTATTTTAGGGATTGTGCATCTTCAGTGTAACCCTCACCTGGCAGACACATTCAGGAGCCTCTaGGAGCTTGACTTATACACA +
Preference number: 3 (lower is better)
Translates to: VIFILGIVHLQCNPHLADTFRSL*ELDLYT
Trigger: TGTGTATAAGTCAAGCTCCAAGAGGCTCCTGAATGT...GTCTGCCAGGTGAGGGTTACACTGAAGATGCACAATCCCTAAAATAAAGATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR TCA 72 bp AATTCTGGAGAAGGATGGCGGCTGGTATTGGCTTGGTaGAATAATGATAGGGTCAATGACTCTGTGATTCTC +
Preference number: 3 (lower is better)
Translates to: NSGEGWRLVLAW*NNDRVNDSVIL
Trigger: GAGAATCACAGAGTCATTGACCCTATCATTATTTCACCAAGCCAATACCAGCCGCCATCCTTCTCCAGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR-3UTR CAA 90 bp ACACTGGTAAGAAATGCAGATTGGCAATCATGTACATCTCTGATTAAAACAACACCTAAACAGCTGTCTTaGTTAGTCCCCGCCCACCTG +
Preference number: 3 (lower is better)
Translates to: TLVRNADWQSCTSLIKTTPKQLS*LVPAHL
Trigger: CAGGTGGGCGGGGACTAACAAAGACAGCTGTTTAGG...TGTTGTTTTAATCAGAGATGTACATGATTGCCAATCTGCATTTCTTACCAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR-3UTR CAA 90 bp ACACTGGTAAGAAATGCAGATTGGCAATCATGTACATCTCTGATTAAAACAACAGAAAACCTGTGGAGTTaGGACCAAGGGCCCACTCAG +
Preference number: 3 (lower is better)
Translates to: TLVRNADWQSCTSLIKTTENLWS*DQGPTQ
Trigger: CTGAGTGGGCCCTTGGTCCAAACTCCACAGGTTTTC...TGTTGTTTTAATCAGAGATGTACATGATTGCCAATCTGCATTTCTTACCAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464064.5
3UTR TCA 72 bp GTTAAAATATGTGGGTCTCACACAGGAAAGGCCTTCTaGAGAAGAAAAATGGGTGAATTCACTGGAGTTGGC +
Preference number: 3 (lower is better)
Translates to: VKICGSHTGKAF*RRKMGEFTGVG
Trigger: GCCAACTCCAGTGAATTCACCCATTTTTCTTCTTCAGAAGGCCTTTCCTGTGTGAGACCCACATATTTTAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
3UTR CCA 72 bp CGTAACAGTGTGGTCACACTGGTAAGAAATGCAGATTaGCAATCATGTACATCTCTGATTAAAACAACACTC +
Preference number: 3 (lower is better)
Translates to: RNSVVTLVRNAD*QSCTSLIKTTL
Trigger: GAGTGTTGTTTTAATCAGAGATGTACATGATTGCCAATCTGCATTTCTTACCAGTGTGACCACACTGTTACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR TCA 90 bp GGAATGCGGCAGCCCTGGGTAGGTGTGGTTAGAAGGCCTGGACGGGGAGGCTGTGCGCCTCCGCGACGGTaGCGCGGCCCCAAGTCCCAA +
Preference number: 4 (lower is better)
Translates to: GMRQPWVGVVRRPGRGGCAPPRR*RGPKSQ
Trigger: TTGGGACTTGGGGCCGCGTCACCGTCGCGGAGGCGC...ACAGCCTCCCCGTCCAGGCCTTCTAACCACACCTACCCAGGGCTGCCGCATTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447756.2
CDS-3UTR CCA 90 bp GGAATGCGGCAGCCCTGGGTAGGTGTGGTTAGAAGGCCTGGACGGGGAGGCTGTGGCCAGGGTGGGCAGTaGCCTGAGCCCGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GMRQPWVGVVRRPGRGGCGQGGQ*PEPGSW
Trigger: CCAGCTGCCGGGCTCAGGCCACTGCCCACCCTGGCC...ACAGCCTCCCCGTCCAGGCCTTCTAACCACACCTACCCAGGGCTGCCGCATTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR TCA 90 bp CCCAGGGCTGCCAGGTACAGAAGGGCTGAAGGAGGCTGTCCAGGCCAGGGTGGGCGGTGGAGCTCCTGGTaGCTCCGAGAGGCCTTCACG +
Preference number: 4 (lower is better)
Translates to: PRAARYRRAEGGCPGQGGRWSSW*LREAFT
Trigger: CGTGAAGGCCTCTCGGAGTCACCAGGAGCTCCACCG...CCCACCCTGGCCTGGACAGCCTCCTTCAGCCCTTCTGTACCTGGCAGCCCTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR TCA 90 bp CCAGGGCTGCCAGGTACAGAAGGGCTGAAGGAGGCTGTCCAGGCCAGGGTGGGCTCCTGTGCTGGGCTCTaGACCCCTTGCAGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: PGLPGTEGLKEAVQARVGSCAGL*TPCREG
Trigger: CCCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGA...GCCCACCCTGGCCTGGACAGCCTCCTTCAGCCCTTCTGTACCTGGCAGCCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp TGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGGGTGCAGGCGGCGGGTGACCTCTaGCTGGCCCAGCGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: CQRKLLCWALNPLQGGVQAAGDL*LAQRAG
Trigger: TCCTGCCCGCTGGGCCAGGCAGAGGTCACCCGCCGC...CTGCACCCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp TGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGGGTGCAGCCAGCCTCTGCGCCATaGCCCCGCGCCTCCTACTGC +
Preference number: 4 (lower is better)
Translates to: CQRKLLCWALNPLQGGVQPASAP*PRASYC
Trigger: GCAGTAGGAGGCGCGGGGGCATGGCGCAGAGGCTGG...CTGCACCCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000447756.2
CDS-3UTR TCA 90 bp CCAGGGCTGCCAGGTACAGAAGGGCTGAAGGAGGCTGTCCAGGCCAGGGTGGGCCAGGTACAGAAGGGCTaGAGGAGGCTGTCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: PGLPGTEGLKEAVQARVGQVQKG*RRLSRP
Trigger: TGGCCTGGACAGCCTCCTTCAGCCCTTCTGTACCTG...GCCCACCCTGGCCTGGACAGCCTCCTTCAGCCCTTCTGTACCTGGCAGCCCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR TCA 90 bp GGAATGCGGCAGCCCTGGGTAGGTGTGGTTAGAAGGCCTGGACGGGGAGGCTGTTCCTGTGCTGGGCTCTaGACCCCTTGCAGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: GMRQPWVGVVRRPGRGGCSCAGL*TPCREG
Trigger: CCCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGA...ACAGCCTCCCCGTCCAGGCCTTCTAACCACACCTACCCAGGGCTGCCGCATTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp CCAGGGCTGCCAGGTACAGAAGGGCTGAAGGAGGCTGTCCAGGCCAGGGTGGGCCGTCTCAGCAGCTCCTaGTCAAAGGGGCACTGCAGC +
Preference number: 4 (lower is better)
Translates to: PGLPGTEGLKEAVQARVGRLSSS*SKGHCS
Trigger: GCTGCAGTGCCCCTTTGAGCAGGAGCTGCTGAGACG...GCCCACCCTGGCCTGGACAGCCTCCTTCAGCCCTTCTGTACCTGGCAGCCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp CCAGGGCTGCCAGGTACAGAAGGGCTGAAGGAGGCTGTCCAGGCCAGGGTGGGCGCACTCTCGCCCTGCTaGTCACAGCATGGTCCTCAC +
Preference number: 4 (lower is better)
Translates to: PGLPGTEGLKEAVQARVGALSPC*SQHGPH
Trigger: GTGAGGACCATGCTGTGAGCAGCAGGGCGAGAGTGC...GCCCACCCTGGCCTGGACAGCCTCCTTCAGCCCTTCTGTACCTGGCAGCCCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp CCCAGGGCTGCCAGGTACAGAAGGGCTGAAGGAGGCTGTCCAGGCCAGGGTGGGTGGGCACTCTCGCCCTaGTGCTCACAGCATGGTCCT +
Preference number: 4 (lower is better)
Translates to: PRAARYRRAEGGCPGQGGWALSP*CSQHGP
Trigger: AGGACCATGCTGTGAGCAGCAGGGCGAGAGTGCCCA...CCCACCCTGGCCTGGACAGCCTCCTTCAGCCCTTCTGTACCTGGCAGCCCTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp TGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGGGTGCAGGGTCGTCTGCACGGCTaGCCTGGAGGGCGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: CQRKLLCWALNPLQGGVQGRLHG*PGGRGA
Trigger: AGCACCACGCCCTCCAGGGCAGCCGTGCAGACGACC...CTGCACCCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR GCA 90 bp GTCTTTGTTAGTCCCCGCCCACCTGGCCGGGATGCCAGCAACAAGGCCATCTGCCTGCAGAGCCAGCACTaGTGGCCCCGCGAGCGCACA +
Preference number: 4 (lower is better)
Translates to: VFVSPRPPGRDASNKAICLQSQH*WPRERT
Trigger: TGTGCGCTCGCGGGGCCAGCAGTGCTGGCTCTGCAG...GCAGATGGCCTTGTTGCTGGCATCCCGGCCAGGTGGGCGGGGACTAACAAAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447756.2
CDS-3UTR GCA 90 bp CTACAGAAGCAGGTGGGAACATCACAGACGTCCCAGGGCCTGGGGCCCAGGGCTGACAGCCCTGGAGGATaGGTGGTCCCTGCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: LQKQVGTSQTSQGLGPRADSPGG*VVPAGC
Trigger: GCACCCAGCAGGGACCACGCATCCTCCAGGGCTGTC...AGCCCTGGGCCCCAGGCCCTGGGACGTCTGTGATGTTCCCACCTGCTTCTGTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464064.5
CDS-3UTR CCA 90 bp CCCAGGGCTGCCAGGTACAGAAGGGCTGAAGGAGGCTGTCCAGGCCAGGGTGGGCCAAGGCCCCTTCTGTaGTTCATGAGCAGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: PRAARYRRAEGGCPGQGGPRPLL*FMSSSR
Trigger: CCGGGAGCTGCTCATGAACCACAGAAGGGGCCTTGG...CCCACCCTGGCCTGGACAGCCTCCTTCAGCCCTTCTGTACCTGGCAGCCCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TTTGTGAGGCACCGCTGCAGACTTCTGAGTGCAGGAATGCGGCAGCCCTGGGTAGGCCAGGGTGGGCAGTaGCCTGAGCCCGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: FVRHRCRLLSAGMRQPWVGQGGQ*PEPGSW
Trigger: CCAGCTGCCGGGCTCAGGCCACTGCCCACCCTGGCC...TACCCAGGGCTGCCGCATTCCTGCACTCAGAAGTCTGCAGCGGTGCCTCACAAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CCAGGGCTGCCAGGTACAGAAGGGCTGAAGGAGGCTGTCCAGGCCAGGGTGGGCCTGAGACCTAGGAGCTaGGGTGTACGGAGAAGCGGG +
Preference number: 4 (lower is better)
Translates to: PGLPGTEGLKEAVQARVGLRPRS*GVRRSG
Trigger: CCCGCTTCTCCGTACACCCCAGCTCCTAGGTCTCAG...GCCCACCCTGGCCTGGACAGCCTCCTTCAGCCCTTCTGTACCTGGCAGCCCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR TCA 90 bp TGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGGGTGCAGCGGTGGAGCTCCTGGTaGCTCCGAGAGGCCTTCACG +
Preference number: 4 (lower is better)
Translates to: CQRKLLCWALNPLQGGVQRWSSW*LREAFT
Trigger: CGTGAAGGCCTCTCGGAGTCACCAGGAGCTCCACCG...CTGCACCCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR TCA 90 bp CTACAGAAGCAGGTGGGAACATCACAGACGTCCCAGGGCCTGGGGCCCAGGGCTGGGTTGGGTCTCAGGTaGCAGAGGCCGGGGATTCAG +
Preference number: 4 (lower is better)
Translates to: LQKQVGTSQTSQGLGPRAGLGLR*QRPGIQ
Trigger: CTGAATCCCCGGCCTCTGTCACCTGAGACCCAACCC...AGCCCTGGGCCCCAGGCCCTGGGACGTCTGTGATGTTCCCACCTGCTTCTGTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR GCA 90 bp TGTGAGGCACCGCTGCAGACTTCTGAGTGCAGGAATGCGGCAGCCCTGGGTAGGTGGTTCCGCCGGCGGTaGTCTAGGACACGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: CEAPLQTSECRNAAALGRWFRRR*SRTRCS
Trigger: GCTGCAGCGTGTCCTAGAGCACCGCCGGCGGAACCA...CCTACCCAGGGCTGCCGCATTCCTGCACTCAGAAGTCTGCAGCGGTGCCTCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CCCAGGGCTGCCAGGTACAGAAGGGCTGAAGGAGGCTGTCCAGGCCAGGGTGGGCCTGGTGGGAAGGCCTaGGCAGAACAGAAGGCTTGT +
Preference number: 4 (lower is better)
Translates to: PRAARYRRAEGGCPGQGGPGGKA*AEQKAC
Trigger: ACAAGCCTTCTGTTCTGCCCAGGCCTTCCCACCAGG...CCCACCCTGGCCTGGACAGCCTCCTTCAGCCCTTCTGTACCTGGCAGCCCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CCCAGGGCTGCCAGGTACAGAAGGGCTGAAGGAGGCTGTCCAGGCCAGGGTGGGCTCGGAGATTCCTGGTaGGAAGGCCTGGGCAGAACA +
Preference number: 4 (lower is better)
Translates to: PRAARYRRAEGGCPGQGGLGDSW*EGLGRT
Trigger: TGTTCTGCCCAGGCCTTCCCACCAGGAATCTCCGAG...CCCACCCTGGCCTGGACAGCCTCCTTCAGCCCTTCTGTACCTGGCAGCCCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CCAGGGCTGCCAGGTACAGAAGGGCTGAAGGAGGCTGTCCAGGCCAGGGTGGGCGACTTGTTGCCTCCATaGAGCACCTCTGGGGACCAC +
Preference number: 4 (lower is better)
Translates to: PGLPGTEGLKEAVQARVGDLLPP*STSGDH
Trigger: GTGGTCCCCAGAGGTGCTCCATGGAGGCAACAAGTC...GCCCACCCTGGCCTGGACAGCCTCCTTCAGCCCTTCTGTACCTGGCAGCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGGGTGCAGCCTGGGCTGCTCCCATaGCACGAAGTGGGCACCAGG +
Preference number: 4 (lower is better)
Translates to: CQRKLLCWALNPLQGGVQPGLLP*HEVGTR
Trigger: CCTGGTGCCCACTTCGTGCCATGGGAGCAGCCCAGG...CTGCACCCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474531.5
ENST00000649301.1
CDS-3UTR TCA 90 bp TGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGGGTGCAGGGTGGGGGAGTTCTCTaGGACCTAGGAGCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: CQRKLLCWALNPLQGGVQGGGVL*DLGAGV
Trigger: CACCCCAGCTCCTAGGTCTCAGAGAACTCCCCCACC...CTGCACCCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp CAGCTAGGGGTTGGGTCTCAGGTGACAGAGGCCGGGGATTCAGACTCAAAGGGGTGGTTCCGCCGGCGGTaGTCTAGGACACGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: QLGVGSQVTEAGDSDSKGWFRRR*SRTRCS
Trigger: GCTGCAGCGTGTCCTAGAGCACCGCCGGCGGAACCA...CCCCTTTGAGTCTGAATCCCCGGCCTCTGTCACCTGAGACCCAACCCCTAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR GCA 90 bp GGAATGCGGCAGCCCTGGGTAGGTGTGGTTAGAAGGCCTGGACGGGGAGGCTGTTGGTTCAGCCTCTGCTaGCGTCTCAGCAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: GMRQPWVGVVRRPGRGGCWFSLC*RLSSSC
Trigger: GCAGGAGCTGCTGAGACGGCAGCAGAGGCTGAACCA...ACAGCCTCCCCGTCCAGGCCTTCTAACCACACCTACCCAGGGCTGCCGCATTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp CTACAGAAGCAGGTGGGAACATCACAGACGTCCCAGGGCCTGGGGCCCAGGGCTAGCTGGTTCAGCCTCTaGTGCCGTCTCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LQKQVGTSQTSQGLGPRASWFSL*CRLSSS
Trigger: GGAGCTGCTGAGACGGCAGCAGAGGCTGAACCAGCT...AGCCCTGGGCCCCAGGCCCTGGGACGTCTGTGATGTTCCCACCTGCTTCTGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp CCCAGGGCTGCCAGGTACAGAAGGGCTGAAGGAGGCTGTCCAGGCCAGGGTGGGCAGAGAAAGCTCCTGTaGTGGGCTCTGAACCCCTTG +
Preference number: 4 (lower is better)
Translates to: PRAARYRRAEGGCPGQGGQRKLL*WALNPL
Trigger: CAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTG...CCCACCCTGGCCTGGACAGCCTCCTTCAGCCCTTCTGTACCTGGCAGCCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp GGAATGCGGCAGCCCTGGGTAGGTGTGGTTAGAAGGCCTGGACGGGGAGGCTGTTGGGCACTCTCGCCCTaGTGCTCACAGCATGGTCCT +
Preference number: 4 (lower is better)
Translates to: GMRQPWVGVVRRPGRGGCWALSP*CSQHGP
Trigger: AGGACCATGCTGTGAGCAGCAGGGCGAGAGTGCCCA...ACAGCCTCCCCGTCCAGGCCTTCTAACCACACCTACCCAGGGCTGCCGCATTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp TCCTCCTCAATTCTGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCACACTCGCCCAGCCTCTaGGCCATGCCCCCGCGCCTC +
Preference number: 4 (lower is better)
Translates to: SSSILPEKAPVLGSEPLAHSPSL*AMPPRL
Trigger: GAGGCGCGGGGGCATGGCGCAGAGGCTGGGCGAGTG...TGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTGAGGAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447756.2
CDS-3UTR GCA 90 bp TGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGGGTGCAGAGGATGCGTGGTCCCTaGTGGGTGCCCATCACCCAC +
Preference number: 4 (lower is better)
Translates to: CQRKLLCWALNPLQGGVQRMRGP*WVPITH
Trigger: GTGGGTGATGGGCACCCAGCAGGGACCACGCATCCT...CTGCACCCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464064.5
CDS-3UTR CCA 90 bp GTCTTTGTTAGTCCCCGCCCACCTGGCCGGGATGCCAGCAACAAGGCCATCTGCCCACTCTCTGTATTCTaGCCGGGCCATCAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: VFVSPRPPGRDASNKAICPLSVF*PGHQAP
Trigger: GGGGGCCTGATGGCCCGGCCAGAATACAGAGAGTGG...GCAGATGGCCTTGTTGCTGGCATCCCGGCCAGGTGGGCGGGGACTAACAAAGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CAGGGAGGGGTGCAGGTTATCCCTCTTGGAGCAGGAGGGCTGGGTGCTTGGAAGCCACTCTCTGTATTCTaGCCGGGCCATCAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: QGGVQVIPLGAGGLGAWKPLSVF*PGHQAP
Trigger: GGGGGCCTGATGGCCCGGCCAGAATACAGAGAGTGG...CTTCCAAGCACCCAGCCCTCCTGCTCCAAGAGGGATAACCTGCACCCCTCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp GGAATGCGGCAGCCCTGGGTAGGTGTGGTTAGAAGGCCTGGACGGGGAGGCTGTCCAAGGCCCCTTCTGTaGTTCATGAGCAGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: GMRQPWVGVVRRPGRGGCPRPLL*FMSSSR
Trigger: CCGGGAGCTGCTCATGAACCACAGAAGGGGCCTTGG...ACAGCCTCCCCGTCCAGGCCTTCTAACCACACCTACCCAGGGCTGCCGCATTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp GGAATGCGGCAGCCCTGGGTAGGTGTGGTTAGAAGGCCTGGACGGGGAGGCTGTGGCACTGCAGCCGCTTaGCTTCCAGCTCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: GMRQPWVGVVRRPGRGGCGTAAA*LPAPPS
Trigger: AGAAGGAGGAGCTGGAAGCCAAGCGGCTGCAGTGCC...ACAGCCTCCCCGTCCAGGCCTTCTAACCACACCTACCCAGGGCTGCCGCATTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGGGTGCAGCCTGAGCCCGGCAGCTaGCCCTACAGCTCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: CQRKLLCWALNPLQGGVQPEPGS*PYSSLS
Trigger: AGAGAGAGAGCTGTAGGGCCAGCTGCCGGGCTCAGG...CTGCACCCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CCCAGGGCTGCCAGGTACAGAAGGGCTGAAGGAGGCTGTCCAGGCCAGGGTGGGGAGAGCCAGGCCCTCTaGGGTGACACATTTCTACAG +
Preference number: 4 (lower is better)
Translates to: PRAARYRRAEGGCPGQGGESQAL*GDTFLQ
Trigger: CTGTAGAAATGTGTCACCCCAGAGGGCCTGGCTCTC...CCCACCCTGGCCTGGACAGCCTCCTTCAGCCCTTCTGTACCTGGCAGCCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CCCAGGGCTGCCAGGTACAGAAGGGCTGAAGGAGGCTGTCCAGGCCAGGGTGGGAGAAAGCTCCTGTGCTaGGCTCTGAACCCCTTGCAG +
Preference number: 4 (lower is better)
Translates to: PRAARYRRAEGGCPGQGGRKLLC*ALNPLQ
Trigger: CTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCT...CCCACCCTGGCCTGGACAGCCTCCTTCAGCCCTTCTGTACCTGGCAGCCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CTACAGAAGCAGGTGGGAACATCACAGACGTCCCAGGGCCTGGGGCCCAGGGCTTGGGGTGGGAATCCCTaGGGCATCAGTCCACAGGAG +
Preference number: 4 (lower is better)
Translates to: LQKQVGTSQTSQGLGPRAWGGNP*GISPQE
Trigger: CTCCTGTGGACTGATGCCCCAGGGATTCCCACCCCA...AGCCCTGGGCCCCAGGCCCTGGGACGTCTGTGATGTTCCCACCTGCTTCTGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CTACAGAAGCAGGTGGGAACATCACAGACGTCCCAGGGCCTGGGGCCCAGGGCTCTGCCCTGGAGGGCGTaGTGCTTGAGGTCCCTTCTA +
Preference number: 4 (lower is better)
Translates to: LQKQVGTSQTSQGLGPRALPWRA*CLRSLL
Trigger: TAGAAGGGACCTCAAGCACCACGCCCTCCAGGGCAG...AGCCCTGGGCCCCAGGCCCTGGGACGTCTGTGATGTTCCCACCTGCTTCTGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TTCCTGGTGGGAAGGCCTGGGCAGAACAGAAGGCTTGTCAAGTCAGAGGGCCACCAGAGCCAGCACTGCTaGCCCCGCGAGCGCACAGCA +
Preference number: 4 (lower is better)
Translates to: FLVGRPGQNRRLVKSEGHQSQHC*PRERTA
Trigger: TGCTGTGCGCTCGCGGGGCCAGCAGTGCTGGCTCTG...GTGGCCCTCTGACTTGACAAGCCTTCTGTTCTGCCCAGGCCTTCCCACCAGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447756.2
CDS-3UTR CCA 90 bp TGTGAGGCACCGCTGCAGACTTCTGAGTGCAGGAATGCGGCAGCCCTGGGTAGGCCAGCGGGCAGGACTTaGCCTTCTCACCTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: CEAPLQTSECRNAAALGRPAGRT*PSHLAG
Trigger: CCCAGCAAGGTGAGAAGGCCAAGTCCTGCCCGCTGG...CCTACCCAGGGCTGCCGCATTCCTGCACTCAGAAGTCTGCAGCGGTGCCTCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474531.5
ENST00000649301.1
CDS-3UTR TCA 90 bp CCAGGGCTGCCAGGTACAGAAGGGCTGAAGGAGGCTGTCCAGGCCAGGGTGGGCATAAACTCGGGGGCGTaGTCCTCTTCCTTCTCTGGT +
Preference number: 4 (lower is better)
Translates to: PGLPGTEGLKEAVQARVGINSGA*SSSFSG
Trigger: ACCAGAGAAGGAAGAGGATCACGCCCCCGAGTTTAT...GCCCACCCTGGCCTGGACAGCCTCCTTCAGCCCTTCTGTACCTGGCAGCCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR TCA 90 bp TGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGGGTGCAGCTGGGGACCACTGGGTaGATCCCCAGGCATTCCCTT +
Preference number: 4 (lower is better)
Translates to: CQRKLLCWALNPLQGGVQLGTTG*IPRHSL
Trigger: AAGGGAATGCCTGGGGATTCACCCAGTGGTCCCCAG...CTGCACCCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR TCA 90 bp CCAGGGCTGCCAGGTACAGAAGGGCTGAAGGAGGCTGTCCAGGCCAGGGTGGGCAGTTGGGACGACCCCTaGAAAGTGAACCAAGGTCGT +
Preference number: 4 (lower is better)
Translates to: PGLPGTEGLKEAVQARVGSWDDP*KVNQGR
Trigger: ACGACCTTGGTTCACTTTTCAGGGGTCGTCCCAACT...GCCCACCCTGGCCTGGACAGCCTCCTTCAGCCCTTCTGTACCTGGCAGCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR GCA 90 bp GTCTTTGTTAGTCCCCGCCCACCTGGCCGGGATGCCAGCAACAAGGCCATCTGCAGCTGGTTCAGCCTCTaGTGCCGTCTCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: VFVSPRPPGRDASNKAICSWFSL*CRLSSS
Trigger: GGAGCTGCTGAGACGGCAGCAGAGGCTGAACCAGCT...GCAGATGGCCTTGTTGCTGGCATCCCGGCCAGGTGGGCGGGGACTAACAAAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp GTCTTTGTTAGTCCCCGCCCACCTGGCCGGGATGCCAGCAACAAGGCCATCTGCATCTGCAGTCTGCCCTaGCCTTCCTCCCCTCAGTGG +
Preference number: 4 (lower is better)
Translates to: VFVSPRPPGRDASNKAICICSLP*PSSPQW
Trigger: CCACTGAGGGGAGGAAGGGCAGGGCAGACTGCAGAT...GCAGATGGCCTTGTTGCTGGCATCCCGGCCAGGTGGGCGGGGACTAACAAAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp TGTGAGGCACCGCTGCAGACTTCTGAGTGCAGGAATGCGGCAGCCCTGGGTAGGATCTGCAGTCTGCCCTaGCCTTCCTCCCCTCAGTGG +
Preference number: 4 (lower is better)
Translates to: CEAPLQTSECRNAAALGRICSLP*PSSPQW
Trigger: CCACTGAGGGGAGGAAGGGCAGGGCAGACTGCAGAT...CCTACCCAGGGCTGCCGCATTCCTGCACTCAGAAGTCTGCAGCGGTGCCTCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp GCAGCCTCCGCCTTACCTGGGAGCTTGTTAGAAATGCAGGATCTCCCAGATCTAGCGGCGGGTGACCTCTaGCTGGCCCAGCGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: AASALPGSLLEMQDLPDLAAGDL*LAQRAG
Trigger: TCCTGCCCGCTGGGCCAGGCAGAGGTCACCCGCCGC...TAGATCTGGGAGATCCTGCATTTCTAACAAGCTCCCAGGTAAGGCGGAGGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TGTGAGGCACCGCTGCAGACTTCTGAGTGCAGGAATGCGGCAGCCCTGGGTAGGTCAGGAGCGTGTTGCTaGGTTCCTCACTCCACCGGG +
Preference number: 4 (lower is better)
Translates to: CEAPLQTSECRNAAALGRSGACC*VPHSTG
Trigger: CCCGGTGGAGTGAGGAACCCAGCAACACGCTCCTGA...CCTACCCAGGGCTGCCGCATTCCTGCACTCAGAAGTCTGCAGCGGTGCCTCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CAGCTAGGGGTTGGGTCTCAGGTGACAGAGGCCGGGGATTCAGACTCAAAGGGGCCTGAGCCCGGCAGCTaGCCCTACAGCTCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: QLGVGSQVTEAGDSDSKGPEPGS*PYSSLS
Trigger: AGAGAGAGAGCTGTAGGGCCAGCTGCCGGGCTCAGG...CCCCTTTGAGTCTGAATCCCCGGCCTCTGTCACCTGAGACCCAACCCCTAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp GAAAAATGGGTGAATTCACTGGAGTTGGCCCAGCTAGGGGTTGGGTCTCAGGTGGGCCAGGGTGGGCAGTaGCCTGAGCCCGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: EKWVNSLELAQLGVGSQVGQGGQ*PEPGSW
Trigger: CCAGCTGCCGGGCTCAGGCCACTGCCCACCCTGGCC...CACCTGAGACCCAACCCCTAGCTGGGCCAACTCCAGTGAATTCACCCATTTTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp AAATGGGTGAATTCACTGGAGTTGGCCCAGCTAGGGGTTGGGTCTCAGGTGACAGGCCAGGGTGGGCAGTaGCCTGAGCCCGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: KWVNSLELAQLGVGSQVTGQGGQ*PEPGSW
Trigger: CCAGCTGCCGGGCTCAGGCCACTGCCCACCCTGGCC...TGTCACCTGAGACCCAACCCCTAGCTGGGCCAACTCCAGTGAATTCACCCATTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGGGTGCAGGCAGGTTATCCCTCTTaGAGCAGGAGGGCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: CQRKLLCWALNPLQGGVQAGYPS*SRRAGC
Trigger: GCACCCAGCCCTCCTGCTCCAAGAGGGATAACCTGC...CTGCACCCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp GTCTTTGTTAGTCCCCGCCCACCTGGCCGGGATGCCAGCAACAAGGCCATCTGCGCAGGTTATCCCTCTTaGAGCAGGAGGGCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: VFVSPRPPGRDASNKAICAGYPS*SRRAGC
Trigger: GCACCCAGCCCTCCTGCTCCAAGAGGGATAACCTGC...GCAGATGGCCTTGTTGCTGGCATCCCGGCCAGGTGGGCGGGGACTAACAAAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGGGTGCAGAGCCTCGGAGATTCCTaGTGGGAAGGCCTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: CQRKLLCWALNPLQGGVQSLGDS*WEGLGR
Trigger: TCTGCCCAGGCCTTCCCACCAGGAATCTCCGAGGCT...CTGCACCCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGGGTGCAGTGGGGTGGGAATCCCTaGGGCATCAGTCCACAGGAG +
Preference number: 4 (lower is better)
Translates to: CQRKLLCWALNPLQGGVQWGGNP*GISPQE
Trigger: CTCCTGTGGACTGATGCCCCAGGGATTCCCACCCCA...CTGCACCCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGGGTGCAGCCCCAGGCATTCCCTTaGAGAGCCCTCGTCCATCTG +
Preference number: 4 (lower is better)
Translates to: CQRKLLCWALNPLQGGVQPQAFP*RALVHL
Trigger: CAGATGGACGAGGGCTCTCCAAGGGAATGCCTGGGG...CTGCACCCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TGTGAGGCACCGCTGCAGACTTCTGAGTGCAGGAATGCGGCAGCCCTGGGTAGGCTGCCCTGGAGGGCGTaGTGCTTGAGGTCCCTTCTA +
Preference number: 4 (lower is better)
Translates to: CEAPLQTSECRNAAALGRLPWRA*CLRSLL
Trigger: TAGAAGGGACCTCAAGCACCACGCCCTCCAGGGCAG...CCTACCCAGGGCTGCCGCATTCCTGCACTCAGAAGTCTGCAGCGGTGCCTCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGGGTGCAGGCCTTCTCACCTTGCTaGGCACCACTCAGCCGACAG +
Preference number: 4 (lower is better)
Translates to: CQRKLLCWALNPLQGGVQAFSPC*APLSRQ
Trigger: CTGTCGGCTGAGTGGTGCCCAGCAAGGTGAGAAGGC...CTGCACCCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474531.5
ENST00000649301.1
CDS-3UTR TCA 90 bp CACAGCATGGTCCTCACACCAGCAGCCTCCGCCTTACCTGGGAGCTTGTTAGAACGGTGGAGCTCCTGGTaGCTCCGAGAGGCCTTCACG +
Preference number: 4 (lower is better)
Translates to: HSMVLTPAASALPGSLLERWSSW*LREAFT
Trigger: CGTGAAGGCCTCTCGGAGTCACCAGGAGCTCCACCG...TTCTAACAAGCTCCCAGGTAAGGCGGAGGCTGCTGGTGTGAGGACCATGCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR TCA 90 bp GGAATGCGGCAGCCCTGGGTAGGTGTGGTTAGAAGGCCTGGACGGGGAGGCTGTCCAGGCCCTCTGGGGTaGCACATTTCTACAGAAGCA +
Preference number: 4 (lower is better)
Translates to: GMRQPWVGVVRRPGRGGCPGPLG*HISTEA
Trigger: TGCTTCTGTAGAAATGTGTCACCCCAGAGGGCCTGG...ACAGCCTCCCCGTCCAGGCCTTCTAACCACACCTACCCAGGGCTGCCGCATTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR TCA 90 bp TCTGCCCTGCCCTTCCTCCCCTCAGTGGCTTTGAAGGCAGGTGTCCTTGAAGCTGGTGGGGGAGTTCTCTaGGACCTAGGAGCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: SALPFLPSVALKAGVLEAGGGVL*DLGAGV
Trigger: CACCCCAGCTCCTAGGTCTCAGAGAACTCCCCCACC...AGCTTCAAGGACACCTGCCTTCAAAGCCACTGAGGGGAGGAAGGGCAGGGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR TCA 90 bp GGAATGCGGCAGCCCTGGGTAGGTGTGGTTAGAAGGCCTGGACGGGGAGGCTGTTCCCCTCAGTGGCTTTaGAGGCAGGTGTCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: GMRQPWVGVVRRPGRGGCSPQWL*RQVSLK
Trigger: CTTCAAGGACACCTGCCTTCAAAGCCACTGAGGGGA...ACAGCCTCCCCGTCCAGGCCTTCTAACCACACCTACCCAGGGCTGCCGCATTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR TCA 90 bp AACCACAGGTGGGGGAGTTCTCTGAGACCTAGGAGCTGGGGTGTACGGAGAAGCGGGTTGGGTCTCAGGTaGCAGAGGCCGGGGATTCAG +
Preference number: 4 (lower is better)
Translates to: NHRWGSSLRPRSWGVRRSGLGLR*QRPGIQ
Trigger: CTGAATCCCCGGCCTCTGTCACCTGAGACCCAACCC...GCTTCTCCGTACACCCCAGCTCCTAGGTCTCAGAGAACTCCCCCACCTGTGGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR TCA 90 bp GTCTTTGTTAGTCCCCGCCCACCTGGCCGGGATGCCAGCAACAAGGCCATCTGCGAGCCCTCGTCCATCTaGGACCCTCTGTCTTGCTTC +
Preference number: 4 (lower is better)
Translates to: VFVSPRPPGRDASNKAICEPSSI*DPLSCF
Trigger: GAAGCAAGACAGAGGGTCTCAGATGGACGAGGGCTC...GCAGATGGCCTTGTTGCTGGCATCCCGGCCAGGTGGGCGGGGACTAACAAAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR TCA 90 bp CAGCTAGGGGTTGGGTCTCAGGTGACAGAGGCCGGGGATTCAGACTCAAAGGGGCTGGGGACCACTGGGTaGATCCCCAGGCATTCCCTT +
Preference number: 4 (lower is better)
Translates to: QLGVGSQVTEAGDSDSKGLGTTG*IPRHSL
Trigger: AAGGGAATGCCTGGGGATTCACCCAGTGGTCCCCAG...CCCCTTTGAGTCTGAATCCCCGGCCTCTGTCACCTGAGACCCAACCCCTAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR GCA 90 bp TCTGCCCTGCCCTTCCTCCCCTCAGTGGCTTTGAAGGCAGGTGTCCTTGAAGCTGCTGCAGCTCTGGCTTaGTGTCCACACCAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: SALPFLPSVALKAGVLEAAAALA*CPHQGP
Trigger: GGGGCCTTGGTGTGGACAGCAAGCCAGAGCTGCAGC...AGCTTCAAGGACACCTGCCTTCAAAGCCACTGAGGGGAGGAAGGGCAGGGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp TGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGGGTGCAGTGCTCTAGGACACGCTaGAGCTCTGGCTTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: CQRKLLCWALNPLQGGVQCSRTR*SSGLLS
Trigger: GGACAGCAAGCCAGAGCTGCAGCGTGTCCTAGAGCA...CTGCACCCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp CCCTCAGTGGCTTTGAAGGCAGGTGTCCTTGAAGCTAAGCTCTGCTGGCTGCAGTGGTTCCGCCGGCGGTaGTCTAGGACACGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PSVALKAGVLEAKLCWLQWFRRR*SRTRCS
Trigger: GCTGCAGCGTGTCCTAGAGCACCGCCGGCGGAACCA...CTGCAGCCAGCAGAGCTTAGCTTCAAGGACACCTGCCTTCAAAGCCACTGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp CCAGGGCTGCCAGGTACAGAAGGGCTGAAGGAGGCTGTCCAGGCCAGGGTGGGCCTTCCTCCTCAATTCTaGCAGAGAAAGCTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: PGLPGTEGLKEAVQARVGLPPQF*QRKLLC
Trigger: GCACAGGAGCTTTCTCTGGCAGAATTGAGGAGGAAG...GCCCACCCTGGCCTGGACAGCCTCCTTCAGCCCTTCTGTACCTGGCAGCCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp CCCAGGGCTGCCAGGTACAGAAGGGCTGAAGGAGGCTGTCCAGGCCAGGGTGGGCTTCCTCCTCAATTCTaGCAGAGAAAGCTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: PRAARYRRAEGGCPGQGGLPPQF*QRKLLC
Trigger: GCACAGGAGCTTTCTCTGGCAGAATTGAGGAGGAAG...CCCACCCTGGCCTGGACAGCCTCCTTCAGCCCTTCTGTACCTGGCAGCCCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp CAGGGAGGGGTGCAGGTTATCCCTCTTGGAGCAGGAGGGCTGGGTGCTTGGAAGCTGCAGACTTCTGAGTaGAGGAATGCGGCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: QGGVQVIPLGAGGLGAWKLQTSE*RNAAAL
Trigger: CAGGGCTGCCGCATTCCTGCACTCAGAAGTCTGCAG...CTTCCAAGCACCCAGCCCTCCTGCTCCAAGAGGGATAACCTGCACCCCTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp TGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGGGTGCAGCATGGACCCGAGGGCTaGTTCTTTGGGGAAGTGGTG +
Preference number: 4 (lower is better)
Translates to: CQRKLLCWALNPLQGGVQHGPEG*FFGEVV
Trigger: CACCACTTCCCCAAAGAAGCAGCCCTCGGGTCCATG...CTGCACCCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR GCA 90 bp TCGGAGATTCCTGGTGGGAAGGCCTGGGCAGAACAGAAGGCTTGTCAAGTCAGACCCCGCGCCTCCTACTaGAGAGCCAGCACTGCTGGC +
Preference number: 4 (lower is better)
Translates to: SEIPGGKAWAEQKACQVRPRASY*RASTAG
Trigger: GCCAGCAGTGCTGGCTCTGCAGTAGGAGGCGCGGGG...TCTGACTTGACAAGCCTTCTGTTCTGCCCAGGCCTTCCCACCAGGAATCTCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447756.2
CDS-3UTR GCA 90 bp CAGGGAGGGGTGCAGGTTATCCCTCTTGGAGCAGGAGGGCTGGGTGCTTGGAAGTTGGCCTTCTCACCTTaGTGGGCACCACTCAGCCGA +
Preference number: 4 (lower is better)
Translates to: QGGVQVIPLGAGGLGAWKLAFSP*WAPLSR
Trigger: TCGGCTGAGTGGTGCCCAGCAAGGTGAGAAGGCCAA...CTTCCAAGCACCCAGCCCTCCTGCTCCAAGAGGGATAACCTGCACCCCTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CCAGGGCTGCCAGGTACAGAAGGGCTGAAGGAGGCTGTCCAGGCCAGGGTGGGCCTTCGCTGGTCAGTGTaGCAATTCTCCGCAGGTTTT +
Preference number: 4 (lower is better)
Translates to: PGLPGTEGLKEAVQARVGLRWSV*QFSAGF
Trigger: AAAACCTGCGGAGAATTGCCACACTGACCAGCGAAG...GCCCACCCTGGCCTGGACAGCCTCCTTCAGCCCTTCTGTACCTGGCAGCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TCTGCCCTGCCCTTCCTCCCCTCAGTGGCTTTGAAGGCAGGTGTCCTTGAAGCTCCTGAGCCCGGCAGCTaGCCCTACAGCTCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: SALPFLPSVALKAGVLEAPEPGS*PYSSLS
Trigger: AGAGAGAGAGCTGTAGGGCCAGCTGCCGGGCTCAGG...AGCTTCAAGGACACCTGCCTTCAAAGCCACTGAGGGGAGGAAGGGCAGGGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CACAGGAGGTGGGGGCCAGCGATGGCTTCAGGGGTGATATTTCCAATATATATCGGCCAGGGTGGGCAGTaGCCTGAGCCCGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: HRRWGPAMASGVIFPIYIGQGGQ*PEPGSW
Trigger: CCAGCTGCCGGGCTCAGGCCACTGCCCACCCTGGCC...GATATATATTGGAAATATCACCCCTGAAGCCATCGCTGGCCCCCACCTCCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CAGCTAGGGGTTGGGTCTCAGGTGACAGAGGCCGGGGATTCAGACTCAAAGGGGGCAGGTTATCCCTCTTaGAGCAGGAGGGCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: QLGVGSQVTEAGDSDSKGAGYPS*SRRAGC
Trigger: GCACCCAGCCCTCCTGCTCCAAGAGGGATAACCTGC...CCCCTTTGAGTCTGAATCCCCGGCCTCTGTCACCTGAGACCCAACCCCTAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TGTGAGGCACCGCTGCAGACTTCTGAGTGCAGGAATGCGGCAGCCCTGGGTAGGCTCGGAGATTCCTGGTaGGAAGGCCTGGGCAGAACA +
Preference number: 4 (lower is better)
Translates to: CEAPLQTSECRNAAALGRLGDSW*EGLGRT
Trigger: TGTTCTGCCCAGGCCTTCCCACCAGGAATCTCCGAG...CCTACCCAGGGCTGCCGCATTCCTGCACTCAGAAGTCTGCAGCGGTGCCTCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CAGCTAGGGGTTGGGTCTCAGGTGACAGAGGCCGGGGATTCAGACTCAAAGGGGAGCCTCGGAGATTCCTaGTGGGAAGGCCTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: QLGVGSQVTEAGDSDSKGSLGDS*WEGLGR
Trigger: TCTGCCCAGGCCTTCCCACCAGGAATCTCCGAGGCT...CCCCTTTGAGTCTGAATCCCCGGCCTCTGTCACCTGAGACCCAACCCCTAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CAGCTAGGGGTTGGGTCTCAGGTGACAGAGGCCGGGGATTCAGACTCAAAGGGGCTGAGACCTAGGAGCTaGGGTGTACGGAGAAGCGGG +
Preference number: 4 (lower is better)
Translates to: QLGVGSQVTEAGDSDSKGLRPRS*GVRRSG
Trigger: CCCGCTTCTCCGTACACCCCAGCTCCTAGGTCTCAG...CCCCTTTGAGTCTGAATCCCCGGCCTCTGTCACCTGAGACCCAACCCCTAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp GTCTTTGTTAGTCCCCGCCCACCTGGCCGGGATGCCAGCAACAAGGCCATCTGCGGAATGCGGCAGCCCTaGGTAGGTGTGGTTAGAAGG +
Preference number: 4 (lower is better)
Translates to: VFVSPRPPGRDASNKAICGMRQP*VGVVRR
Trigger: CCTTCTAACCACACCTACCCAGGGCTGCCGCATTCC...GCAGATGGCCTTGTTGCTGGCATCCCGGCCAGGTGGGCGGGGACTAACAAAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CAATTCTGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGGCTGGGGTTGCAGAAGTaGGGTGGGAATCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: QFCQRKLLCWALNPLQGGLGLQK*GGNPWG
Trigger: GCCCCAGGGATTCCCACCCCACTTCTGCAACCCCAG...CCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TGTGAGGCACCGCTGCAGACTTCTGAGTGCAGGAATGCGGCAGCCCTGGGTAGGTCCATGGAGCACCTCTaGGGACCACTGGGTGAATCC +
Preference number: 4 (lower is better)
Translates to: CEAPLQTSECRNAAALGRSMEHL*GPLGES
Trigger: GGATTCACCCAGTGGTCCCCAGAGGTGCTCCATGGA...CCTACCCAGGGCTGCCGCATTCCTGCACTCAGAAGTCTGCAGCGGTGCCTCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp GGAATGCGGCAGCCCTGGGTAGGTGTGGTTAGAAGGCCTGGACGGGGAGGCTGTGTCATGGTAGCAAAGTaGCTGCTGTGGCTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: GMRQPWVGVVRRPGRGGCVMVAK*LLWLQA
Trigger: TGCCTGGAGCCACAGCAGCCACTTTGCTACCATGAC...ACAGCCTCCCCGTCCAGGCCTTCTAACCACACCTACCCAGGGCTGCCGCATTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TTCCTGGTGGGAAGGCCTGGGCAGAACAGAAGGCTTGTCAAGTCAGAGGGCCACGGATCTCCGAGTACATaGCGGCCGACCGGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: FLVGRPGQNRRLVKSEGHGSPST*RPTGAA
Trigger: TGCTGCTCCGGTCGGCCGCCATGTACTCGGAGATCC...GTGGCCCTCTGACTTGACAAGCCTTCTGTTCTGCCCAGGCCTTCCCACCAGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447756.2
CDS-3UTR CCA 90 bp GTGGGAAGGCCTGGGCAGAACAGAAGGCTTGTCAAGTCAGAGGGCCACCTCTTCCCAGCGGGCAGGACTTaGCCTTCTCACCTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: VGRPGQNRRLVKSEGHLFPAGRT*PSHLAG
Trigger: CCCAGCAAGGTGAGAAGGCCAAGTCCTGCCCGCTGG...GAAGAGGTGGCCCTCTGACTTGACAAGCCTTCTGTTCTGCCCAGGCCTTCCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CCAGCAGCCTCCGCCTTACCTGGGAGCTTGTTAGAAATGCAGGATCTCCCAGATCGGGTGACCTCTGCCTaGCCCAGCGGGCAGGACTTG +
Preference number: 4 (lower is better)
Translates to: PAASALPGSLLEMQDLPDRVTSA*PSGQDL
Trigger: CAAGTCCTGCCCGCTGGGCCAGGCAGAGGTCACCCG...ATCTGGGAGATCCTGCATTTCTAACAAGCTCCCAGGTAAGGCGGAGGCTGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474531.5
ENST00000649301.1
3UTR CAA 72 bp GCATGGGTGAGGGGAGAAGACCCTAAACAGCTGTCTTaGTTAGTCCCCGCCCACCTGGCCGGGATGCCAGCA +
Preference number: 4 (lower is better)
Translates to: AWVRGEDPKQLS*LVPAHLAGMPA
Trigger: TGCTGGCATCCCGGCCAGGTGGGCGGGGACTAACAAAGACAGCTGTTTAGGGTCTTCTCCCCTCACCCATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR TCA 90 bp CAATTCTGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGGCCCTTCTGTGGTTCATaGGCAGCTCCCGGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: QFCQRKLLCWALNPLQGGPFCGS*AAPGGA
Trigger: AGCTCCACCGGGAGCTGCTCATGAACCACAGAAGGG...CCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR TCA 90 bp GTCTTTGTTAGTCCCCGCCCACCTGGCCGGGATGCCAGCAACAAGGCCATCTGCCCAGGCCCTCTGGGGTaGCACATTTCTACAGAAGCA +
Preference number: 4 (lower is better)
Translates to: VFVSPRPPGRDASNKAICPGPLG*HISTEA
Trigger: TGCTTCTGTAGAAATGTGTCACCCCAGAGGGCCTGG...GCAGATGGCCTTGTTGCTGGCATCCCGGCCAGGTGGGCGGGGACTAACAAAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR TCA 90 bp GTGGGAAGGCCTGGGCAGAACAGAAGGCTTGTCAAGTCAGAGGGCCACCTCTTCGAGGCAGCTGGGAAATaGGGGAAGACGTGGGGCAGT +
Preference number: 4 (lower is better)
Translates to: VGRPGQNRRLVKSEGHLFEAAGK*GKTWGS
Trigger: ACTGCCCCACGTCTTCCCTCATTTCCCAGCTGCCTC...GAAGAGGTGGCCCTCTGACTTGACAAGCCTTCTGTTCTGCCCAGGCCTTCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp TGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGGGTGCAGAAGTCAGGAGCGTGTTaGTGGGTTCCTCACTCCACC +
Preference number: 4 (lower is better)
Translates to: CQRKLLCWALNPLQGGVQKSGAC*WVPHST
Trigger: GGTGGAGTGAGGAACCCAGCAACACGCTCCTGACTT...CTGCACCCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000649301.1
CDS-3UTR GCA 90 bp TGTGAGGCACCGCTGCAGACTTCTGAGTGCAGGAATGCGGCAGCCCTGGGTAGGAAGTCAGGAGCGTGTTaGTGGGTTCCTCACTCCACC +
Preference number: 4 (lower is better)
Translates to: CEAPLQTSECRNAAALGRKSGAC*WVPHST
Trigger: GGTGGAGTGAGGAACCCAGCAACACGCTCCTGACTT...CCTACCCAGGGCTGCCGCATTCCTGCACTCAGAAGTCTGCAGCGGTGCCTCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000649301.1
CDS-3UTR GCA 90 bp TCGGAGATTCCTGGTGGGAAGGCCTGGGCAGAACAGAAGGCTTGTCAAGTCAGATGGTTCCGCCGGCGGTaGTCTAGGACACGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SEIPGGKAWAEQKACQVRWFRRR*SRTRCS
Trigger: GCTGCAGCGTGTCCTAGAGCACCGCCGGCGGAACCA...TCTGACTTGACAAGCCTTCTGTTCTGCCCAGGCCTTCCCACCAGGAATCTCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp TCTGCCCTGCCCTTCCTCCCCTCAGTGGCTTTGAAGGCAGGTGTCCTTGAAGCTTGCTCAAAGGGGCACTaGAGCCGCTTGGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: SALPFLPSVALKAGVLEACSKGH*SRLASS
Trigger: GCTGGAAGCCAAGCGGCTGCAGTGCCCCTTTGAGCA...AGCTTCAAGGACACCTGCCTTCAAAGCCACTGAGGGGAGGAAGGGCAGGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp CAATTCTGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGGCGTCTCAGCAGCTCCTaGTCAAAGGGGCACTGCAGC +
Preference number: 4 (lower is better)
Translates to: QFCQRKLLCWALNPLQGGRLSSS*SKGHCS
Trigger: GCTGCAGTGCCCCTTTGAGCAGGAGCTGCTGAGACG...CCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp TCTGCCCTGCCCTTCCTCCCCTCAGTGGCTTTGAAGGCAGGTGTCCTTGAAGCTAGCTGGTTCAGCCTCTaGTGCCGTCTCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SALPFLPSVALKAGVLEASWFSL*CRLSSS
Trigger: GGAGCTGCTGAGACGGCAGCAGAGGCTGAACCAGCT...AGCTTCAAGGACACCTGCCTTCAAAGCCACTGAGGGGAGGAAGGGCAGGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp CACAGCATGGTCCTCACACCAGCAGCCTCCGCCTTACCTGGGAGCTTGTTAGAACCCACCTGGCCGGGATaGCAGCAACAAGGCCATCTG +
Preference number: 4 (lower is better)
Translates to: HSMVLTPAASALPGSLLEPTWPG*QQQGHL
Trigger: CAGATGGCCTTGTTGCTGGCATCCCGGCCAGGTGGG...TTCTAACAAGCTCCCAGGTAAGGCGGAGGCTGCTGGTGTGAGGACCATGCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp CAATTCTGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGGTGGGCACTCTCGCCCTaGTGCTCACAGCATGGTCCT +
Preference number: 4 (lower is better)
Translates to: QFCQRKLLCWALNPLQGGWALSP*CSQHGP
Trigger: AGGACCATGCTGTGAGCAGCAGGGCGAGAGTGCCCA...CCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp GTGGGAAGGCCTGGGCAGAACAGAAGGCTTGTCAAGTCAGAGGGCCACCTCTTCCCCTGGAGGGCGTGGTaGTTGAGGTCCCTTCTACCT +
Preference number: 4 (lower is better)
Translates to: VGRPGQNRRLVKSEGHLFPWRAW*LRSLLP
Trigger: AGGTAGAAGGGACCTCAAGCACCACGCCCTCCAGGG...GAAGAGGTGGCCCTCTGACTTGACAAGCCTTCTGTTCTGCCCAGGCCTTCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR GCA 90 bp AACCACAGGTGGGGGAGTTCTCTGAGACCTAGGAGCTGGGGTGTACGGAGAAGCCCCTGGAGGGCGTGGTaGTTGAGGTCCCTTCTACCT +
Preference number: 4 (lower is better)
Translates to: NHRWGSSLRPRSWGVRRSPWRAW*LRSLLP
Trigger: AGGTAGAAGGGACCTCAAGCACCACGCCCTCCAGGG...GCTTCTCCGTACACCCCAGCTCCTAGGTCTCAGAGAACTCCCCCACCTGTGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR GCA 90 bp TCTGCCCTGCCCTTCCTCCCCTCAGTGGCTTTGAAGGCAGGTGTCCTTGAAGCTTCTGGGAGGGCTGCGTaGGGATGTCAGCTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: SALPFLPSVALKAGVLEASGRAA*GCQLQL
Trigger: CAGCTGAAGCTGACATCCGCACGCAGCCCTCCCAGA...AGCTTCAAGGACACCTGCCTTCAAAGCCACTGAGGGGAGGAAGGGCAGGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp AACCACAGGTGGGGGAGTTCTCTGAGACCTAGGAGCTGGGGTGTACGGAGAAGCGAGCTCTGGGAGGGCTaGGTGCGGATGTCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: NHRWGSSLRPRSWGVRRSELWEG*VRMSAS
Trigger: TGAAGCTGACATCCGCACGCAGCCCTCCCAGAGCTC...GCTTCTCCGTACACCCCAGCTCCTAGGTCTCAGAGAACTCCCCCACCTGTGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp TCTGCCCTGCCCTTCCTCCCCTCAGTGGCTTTGAAGGCAGGTGTCCTTGAAGCTCTTCTTCCCCTGGGCTaGTCCCATGGCACGAAGTGG +
Preference number: 4 (lower is better)
Translates to: SALPFLPSVALKAGVLEALLPLG*SHGTKW
Trigger: CCACTTCGTGCCATGGGAGCAGCCCAGGGGAAGAAG...AGCTTCAAGGACACCTGCCTTCAAAGCCACTGAGGGGAGGAAGGGCAGGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp AACCACAGGTGGGGGAGTTCTCTGAGACCTAGGAGCTGGGGTGTACGGAGAAGCTCTGCCCGCTCCCTCTaGATCTCCGAGTACATGGCG +
Preference number: 4 (lower is better)
Translates to: NHRWGSSLRPRSWGVRRSSARSL*ISEYMA
Trigger: CGCCATGTACTCGGAGATCCAGAGGGAGCGGGCAGA...GCTTCTCCGTACACCCCAGCTCCTAGGTCTCAGAGAACTCCCCCACCTGTGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CCCTCAGTGGCTTTGAAGGCAGGTGTCCTTGAAGCTAAGCTCTGCTGGCTGCAGCCACTCTCTGTATTCTaGCCGGGCCATCAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: PSVALKAGVLEAKLCWLQPLSVF*PGHQAP
Trigger: GGGGGCCTGATGGCCCGGCCAGAATACAGAGAGTGG...CTGCAGCCAGCAGAGCTTAGCTTCAAGGACACCTGCCTTCAAAGCCACTGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CACAGCATGGTCCTCACACCAGCAGCCTCCGCCTTACCTGGGAGCTTGTTAGAACCACTCTCTGTATTCTaGCCGGGCCATCAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: HSMVLTPAASALPGSLLEPLSVF*PGHQAP
Trigger: GGGGGCCTGATGGCCCGGCCAGAATACAGAGAGTGG...TTCTAACAAGCTCCCAGGTAAGGCGGAGGCTGCTGGTGTGAGGACCATGCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TTCCTGGTGGGAAGGCCTGGGCAGAACAGAAGGCTTGTCAAGTCAGAGGGCCACCCAAGGCCCCTTCTGTaGTTCATGAGCAGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: FLVGRPGQNRRLVKSEGHPRPLL*FMSSSR
Trigger: CCGGGAGCTGCTCATGAACCACAGAAGGGGCCTTGG...GTGGCCCTCTGACTTGACAAGCCTTCTGTTCTGCCCAGGCCTTCCCACCAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp AACCACAGGTGGGGGAGTTCTCTGAGACCTAGGAGCTGGGGTGTACGGAGAAGCCCAAGGCCCCTTCTGTaGTTCATGAGCAGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: NHRWGSSLRPRSWGVRRSPRPLL*FMSSSR
Trigger: CCGGGAGCTGCTCATGAACCACAGAAGGGGCCTTGG...GCTTCTCCGTACACCCCAGCTCCTAGGTCTCAGAGAACTCCCCCACCTGTGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TGTGAGGCACCGCTGCAGACTTCTGAGTGCAGGAATGCGGCAGCCCTGGGTAGGTTCTTCTTGATGAGCTaGTTCCGCCGGCGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: CEAPLQTSECRNAAALGRFFLMS*FRRRCS
Trigger: AGAGCACCGCCGGCGGAACCAGCTCATCAAGAAGAA...CCTACCCAGGGCTGCCGCATTCCTGCACTCAGAAGTCTGCAGCGGTGCCTCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGGGTGCAGTTCTTCTTGATGAGCTaGTTCCGCCGGCGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: CQRKLLCWALNPLQGGVQFFLMS*FRRRCS
Trigger: AGAGCACCGCCGGCGGAACCAGCTCATCAAGAAGAA...CTGCACCCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TCAATTCTGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGCCTGAGCCCGGCAGCTaGCCCTACAGCTCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: SILPEKAPVLGSEPLAGRPEPGS*PYSSLS
Trigger: AGAGAGAGAGCTGTAGGGCCAGCTGCCGGGCTCAGG...CCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp GTCTTTGTTAGTCCCCGCCCACCTGGCCGGGATGCCAGCAACAAGGCCATCTGCTTGGAGCAGGAGGGCTaGGTGCTTGGAAGGAAAACC +
Preference number: 4 (lower is better)
Translates to: VFVSPRPPGRDASNKAICLEQEG*VLGRKT
Trigger: GGTTTTCCTTCCAAGCACCCAGCCCTCCTGCTCCAA...GCAGATGGCCTTGTTGCTGGCATCCCGGCCAGGTGGGCGGGGACTAACAAAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CAGGGAGGGGTGCAGGTTATCCCTCTTGGAGCAGGAGGGCTGGGTGCTTGGAAGTTGGAGCAGGAGGGCTaGGTGCTTGGAAGGAAAACC +
Preference number: 4 (lower is better)
Translates to: QGGVQVIPLGAGGLGAWKLEQEG*VLGRKT
Trigger: GGTTTTCCTTCCAAGCACCCAGCCCTCCTGCTCCAA...CTTCCAAGCACCCAGCCCTCCTGCTCCAAGAGGGATAACCTGCACCCCTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp GTCTTTGTTAGTCCCCGCCCACCTGGCCGGGATGCCAGCAACAAGGCCATCTGCAGAAAGCTCCTGTGCTaGGCTCTGAACCCCTTGCAG +
Preference number: 4 (lower is better)
Translates to: VFVSPRPPGRDASNKAICRKLLC*ALNPLQ
Trigger: CTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCT...GCAGATGGCCTTGTTGCTGGCATCCCGGCCAGGTGGGCGGGGACTAACAAAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TTCCTGGTGGGAAGGCCTGGGCAGAACAGAAGGCTTGTCAAGTCAGAGGGCCACCTGAGACCTAGGAGCTaGGGTGTACGGAGAAGCGGG +
Preference number: 4 (lower is better)
Translates to: FLVGRPGQNRRLVKSEGHLRPRS*GVRRSG
Trigger: CCCGCTTCTCCGTACACCCCAGCTCCTAGGTCTCAG...GTGGCCCTCTGACTTGACAAGCCTTCTGTTCTGCCCAGGCCTTCCCACCAGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp GGAATGCGGCAGCCCTGGGTAGGTGTGGTTAGAAGGCCTGGACGGGGAGGCTGTAATATATATCAGCCCTaGGCACTCTCGCCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GMRQPWVGVVRRPGRGGCNIYQP*ALSPCC
Trigger: GCAGCAGGGCGAGAGTGCCCAGGGCTGATATATATT...ACAGCCTCCCCGTCCAGGCCTTCTAACCACACCTACCCAGGGCTGCCGCATTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TTTGTGAGGCACCGCTGCAGACTTCTGAGTGCAGGAATGCGGCAGCCCTGGGTATGGGGTGGGAATCCCTaGGGCATCAGTCCACAGGAG +
Preference number: 4 (lower is better)
Translates to: FVRHRCRLLSAGMRQPWVWGGNP*GISPQE
Trigger: CTCCTGTGGACTGATGCCCCAGGGATTCCCACCCCA...TACCCAGGGCTGCCGCATTCCTGCACTCAGAAGTCTGCAGCGGTGCCTCACAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CACAGCATGGTCCTCACACCAGCAGCCTCCGCCTTACCTGGGAGCTTGTTAGAACTGGGGTTGCAGAAGTaGGGTGGGAATCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: HSMVLTPAASALPGSLLELGLQK*GGNPWG
Trigger: GCCCCAGGGATTCCCACCCCACTTCTGCAACCCCAG...TTCTAACAAGCTCCCAGGTAAGGCGGAGGCTGCTGGTGTGAGGACCATGCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CCAGGGCTGCCAGGTACAGAAGGGCTGAAGGAGGCTGTCCAGGCCAGGGTGGGCATAATGAAGGATACCTaGGGTTGCAGAAGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: PGLPGTEGLKEAVQARVGIMKDT*GCRSGV
Trigger: CACCCCACTTCTGCAACCCCAGGTATCCTTCATTAT...GCCCACCCTGGCCTGGACAGCCTCCTTCAGCCCTTCTGTACCTGGCAGCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp GCTCACAGCATGGTCCTCACACCAGCAGCCTCCGCCTTACCTGGGAGCTTGTTACCCCAGGCATTCCCTTaGAGAGCCCTCGTCCATCTG +
Preference number: 4 (lower is better)
Translates to: AHSMVLTPAASALPGSLLPQAFP*RALVHL
Trigger: CAGATGGACGAGGGCTCTCCAAGGGAATGCCTGGGG...TAACAAGCTCCCAGGTAAGGCGGAGGCTGCTGGTGTGAGGACCATGCTGTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TTTGTGAGGCACCGCTGCAGACTTCTGAGTGCAGGAATGCGGCAGCCCTGGGTACCCCAGGCATTCCCTTaGAGAGCCCTCGTCCATCTG +
Preference number: 4 (lower is better)
Translates to: FVRHRCRLLSAGMRQPWVPQAFP*RALVHL
Trigger: CAGATGGACGAGGGCTCTCCAAGGGAATGCCTGGGG...TACCCAGGGCTGCCGCATTCCTGCACTCAGAAGTCTGCAGCGGTGCCTCACAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp GTGGGAAGGCCTGGGCAGAACAGAAGGCTTGTCAAGTCAGAGGGCCACCTCTTCCTGCCCTGGAGGGCGTaGTGCTTGAGGTCCCTTCTA +
Preference number: 4 (lower is better)
Translates to: VGRPGQNRRLVKSEGHLFLPWRA*CLRSLL
Trigger: TAGAAGGGACCTCAAGCACCACGCCCTCCAGGGCAG...GAAGAGGTGGCCCTCTGACTTGACAAGCCTTCTGTTCTGCCCAGGCCTTCCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp GTCTTTGTTAGTCCCCGCCCACCTGGCCGGGATGCCAGCAACAAGGCCATCTGCCAGCATGCAGTACACTaGGCCAGTGAGGAAGCTGAG +
Preference number: 4 (lower is better)
Translates to: VFVSPRPPGRDASNKAICQHAVH*ASEEAE
Trigger: CTCAGCTTCCTCACTGGCCCAGTGTACTGCATGCTG...GCAGATGGCCTTGTTGCTGGCATCCCGGCCAGGTGGGCGGGGACTAACAAAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464064.5
3UTR CAA 72 bp TGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTaGCAGGGAGGGGTGCAGGTTATCCCTCTTGGAGCA +
Preference number: 4 (lower is better)
Translates to: CQRKLLCWALNP*QGGVQVIPLGA
Trigger: TGCTCCAAGAGGGATAACCTGCACCCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR TCA 90 bp TCAATTCTGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGCCCTTCTGTGGTTCATaGGCAGCTCCCGGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: SILPEKAPVLGSEPLAGRPFCGS*AAPGGA
Trigger: AGCTCCACCGGGAGCTGCTCATGAACCACAGAAGGG...CCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR TCA 90 bp CCCTCAGTGGCTTTGAAGGCAGGTGTCCTTGAAGCTAAGCTCTGCTGGCTGCAGCCCTTCTGTGGTTCATaGGCAGCTCCCGGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: PSVALKAGVLEAKLCWLQPFCGS*AAPGGA
Trigger: AGCTCCACCGGGAGCTGCTCATGAACCACAGAAGGG...CTGCAGCCAGCAGAGCTTAGCTTCAAGGACACCTGCCTTCAAAGCCACTGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR TCA 90 bp TGTGAGGCACCGCTGCAGACTTCTGAGTGCAGGAATGCGGCAGCCCTGGGTAGGATAAACTCGGGGGCGTaGTCCTCTTCCTTCTCTGGT +
Preference number: 4 (lower is better)
Translates to: CEAPLQTSECRNAAALGRINSGA*SSSFSG
Trigger: ACCAGAGAAGGAAGAGGATCACGCCCCCGAGTTTAT...CCTACCCAGGGCTGCCGCATTCCTGCACTCAGAAGTCTGCAGCGGTGCCTCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR TCA 90 bp CCCTCAGTGGCTTTGAAGGCAGGTGTCCTTGAAGCTAAGCTCTGCTGGCTGCAGCAGGTACAGAAGGGCTaGAGGAGGCTGTCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: PSVALKAGVLEAKLCWLQQVQKG*RRLSRP
Trigger: TGGCCTGGACAGCCTCCTTCAGCCCTTCTGTACCTG...CTGCAGCCAGCAGAGCTTAGCTTCAAGGACACCTGCCTTCAAAGCCACTGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR TCA 90 bp TCAATTCTGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGCAGGTACAGAAGGGCTaGAGGAGGCTGTCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: SILPEKAPVLGSEPLAGRQVQKG*RRLSRP
Trigger: TGGCCTGGACAGCCTCCTTCAGCCCTTCTGTACCTG...CCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR TCA 90 bp CCAGCAGCCTCCGCCTTACCTGGGAGCTTGTTAGAAATGCAGGATCTCCCAGATGGGTTGGGTCTCAGGTaGCAGAGGCCGGGGATTCAG +
Preference number: 4 (lower is better)
Translates to: PAASALPGSLLEMQDLPDGLGLR*QRPGIQ
Trigger: CTGAATCCCCGGCCTCTGTCACCTGAGACCCAACCC...ATCTGGGAGATCCTGCATTTCTAACAAGCTCCCAGGTAAGGCGGAGGCTGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR TCA 90 bp CCAGGGCTGCCAGGTACAGAAGGGCTGAAGGAGGCTGTCCAGGCCAGGGTGGGCAAGAAGAAAAATGGGTaGATTCACTGGAGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: PGLPGTEGLKEAVQARVGKKKNG*IHWSWP
Trigger: GGGCCAACTCCAGTGAATTCACCCATTTTTCTTCTT...GCCCACCCTGGCCTGGACAGCCTCCTTCAGCCCTTCTGTACCTGGCAGCCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR TCA 90 bp CAGGGAGGGGTGCAGGTTATCCCTCTTGGAGCAGGAGGGCTGGGTGCTTGGAAGAGTTGGGACGACCCCTaGAAAGTGAACCAAGGTCGT +
Preference number: 4 (lower is better)
Translates to: QGGVQVIPLGAGGLGAWKSWDDP*KVNQGR
Trigger: ACGACCTTGGTTCACTTTTCAGGGGTCGTCCCAACT...CTTCCAAGCACCCAGCCCTCCTGCTCCAAGAGGGATAACCTGCACCCCTCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR TCA 90 bp TCCTCCTCAATTCTGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAAGTCCCAAACCCCGCTaGGGGTCAAGTTACGGCGGC +
Preference number: 4 (lower is better)
Translates to: SSSILPEKAPVLGSEPLASPKPR*GSSYGG
Trigger: GCCGCCGTAACTTGACCCTCAGCGGGGTTTGGGACT...TGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTGAGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000447756.2
CDS-3UTR TCA 90 bp GGAATGCGGCAGCCCTGGGTAGGTGTGGTTAGAAGGCCTGGACGGGGAGGCTGTGGGGGATTCCTACTCTaGAAACCTGTGGAGTTTGGA +
Preference number: 4 (lower is better)
Translates to: GMRQPWVGVVRRPGRGGCGGFLL*KPVEFG
Trigger: TCCAAACTCCACAGGTTTTCAGAGTAGGAATCCCCC...ACAGCCTCCCCGTCCAGGCCTTCTAACCACACCTACCCAGGGCTGCCGCATTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464064.5
CDS-3UTR GCA 90 bp TCGGAGATTCCTGGTGGGAAGGCCTGGGCAGAACAGAAGGCTTGTCAAGTCAGAGCTGCAGCTCTGGCTTaGTGTCCACACCAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: SEIPGGKAWAEQKACQVRAAALA*CPHQGP
Trigger: GGGGCCTTGGTGTGGACAGCAAGCCAGAGCTGCAGC...TCTGACTTGACAAGCCTTCTGTTCTGCCCAGGCCTTCCCACCAGGAATCTCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp TTTGTGAGGCACCGCTGCAGACTTCTGAGTGCAGGAATGCGGCAGCCCTGGGTATGCTCTAGGACACGCTaGAGCTCTGGCTTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: FVRHRCRLLSAGMRQPWVCSRTR*SSGLLS
Trigger: GGACAGCAAGCCAGAGCTGCAGCGTGTCCTAGAGCA...TACCCAGGGCTGCCGCATTCCTGCACTCAGAAGTCTGCAGCGGTGCCTCACAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp GAAAAATGGGTGAATTCACTGGAGTTGGCCCAGCTAGGGGTTGGGTCTCAGGTGTGGTTCCGCCGGCGGTaGTCTAGGACACGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: EKWVNSLELAQLGVGSQVWFRRR*SRTRCS
Trigger: GCTGCAGCGTGTCCTAGAGCACCGCCGGCGGAACCA...CACCTGAGACCCAACCCCTAGCTGGGCCAACTCCAGTGAATTCACCCATTTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR GCA 90 bp TCAATTCTGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGTGCTCAAAGGGGCACTaGAGCCGCTTGGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: SILPEKAPVLGSEPLAGRCSKGH*SRLASS
Trigger: GCTGGAAGCCAAGCGGCTGCAGTGCCCCTTTGAGCA...CCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp AACCACAGGTGGGGGAGTTCTCTGAGACCTAGGAGCTGGGGTGTACGGAGAAGCCCTTGCAGGGAGGGGTaGAGGTTATCCCTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: NHRWGSSLRPRSWGVRRSPCREG*RLSLLE
Trigger: CTCCAAGAGGGATAACCTGCACCCCTCCCTGCAAGG...GCTTCTCCGTACACCCCAGCTCCTAGGTCTCAGAGAACTCCCCCACCTGTGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp CCCTCAGTGGCTTTGAAGGCAGGTGTCCTTGAAGCTAAGCTCTGCTGGCTGCAGATCTGCAGTCTGCCCTaGCCTTCCTCCCCTCAGTGG +
Preference number: 4 (lower is better)
Translates to: PSVALKAGVLEAKLCWLQICSLP*PSSPQW
Trigger: CCACTGAGGGGAGGAAGGGCAGGGCAGACTGCAGAT...CTGCAGCCAGCAGAGCTTAGCTTCAAGGACACCTGCCTTCAAAGCCACTGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp TCGGAGATTCCTGGTGGGAAGGCCTGGGCAGAACAGAAGGCTTGTCAAGTCAGACCCACCTGGCCGGGATaGCAGCAACAAGGCCATCTG +
Preference number: 4 (lower is better)
Translates to: SEIPGGKAWAEQKACQVRPTWPG*QQQGHL
Trigger: CAGATGGCCTTGTTGCTGGCATCCCGGCCAGGTGGG...TCTGACTTGACAAGCCTTCTGTTCTGCCCAGGCCTTCCCACCAGGAATCTCCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp GTCTTTGTTAGTCCCCGCCCACCTGGCCGGGATGCCAGCAACAAGGCCATCTGCAAGGATACCTGGGGTTaGAGAAGTGGGGTGGGAATC +
Preference number: 4 (lower is better)
Translates to: VFVSPRPPGRDASNKAICKDTWG*RSGVGI
Trigger: GATTCCCACCCCACTTCTGCAACCCCAGGTATCCTT...GCAGATGGCCTTGTTGCTGGCATCCCGGCCAGGTGGGCGGGGACTAACAAAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp TGTGAGGCACCGCTGCAGACTTCTGAGTGCAGGAATGCGGCAGCCCTGGGTAGGGCATTTACAGCCCTGTaGTGGCAGCACACACAGGAA +
Preference number: 4 (lower is better)
Translates to: CEAPLQTSECRNAAALGRAFTAL*WQHTQE
Trigger: TTCCTGTGTGTGCTGCCAGCACAGGGCTGTAAATGC...CCTACCCAGGGCTGCCGCATTCCTGCACTCAGAAGTCTGCAGCGGTGCCTCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR GCA 90 bp CCAGGGCTGCCAGGTACAGAAGGGCTGAAGGAGGCTGTCCAGGCCAGGGTGGGCATAGCCATCCTAAGCTaGAAAGGAGACTGGAACAGT +
Preference number: 4 (lower is better)
Translates to: PGLPGTEGLKEAVQARVGIAILS*KGDWNS
Trigger: ACTGTTCCAGTCTCCTTTGCAGCTTAGGATGGCTAT...GCCCACCCTGGCCTGGACAGCCTCCTTCAGCCCTTCTGTACCTGGCAGCCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR GCA 90 bp GTCTTTGTTAGTCCCCGCCCACCTGGCCGGGATGCCAGCAACAAGGCCATCTGCCCTGGGGATGAGTTTTaGTATCAGCCTGGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: VFVSPRPPGRDASNKAICPGDEF*YQPGSW
Trigger: CCAGCTACCAGGCTGATAGCAAAACTCATCCCCAGG...GCAGATGGCCTTGTTGCTGGCATCCCGGCCAGGTGGGCGGGGACTAACAAAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000464064.5
CDS-3UTR GCA 90 bp CACAGCATGGTCCTCACACCAGCAGCCTCCGCCTTACCTGGGAGCTTGTTAGAACCCAGGCGGCTTCTATaGCCTTCTTGGGTCCCTGCA +
Preference number: 4 (lower is better)
Translates to: HSMVLTPAASALPGSLLEPRRLL*PSWVPA
Trigger: TGCAGGGACCCAAGAAGGGCATAGAAGCCGCCTGGG...TTCTAACAAGCTCCCAGGTAAGGCGGAGGCTGCTGGTGTGAGGACCATGCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp CCCTCAGTGGCTTTGAAGGCAGGTGTCCTTGAAGCTAAGCTCTGCTGGCTGCAGCCCAGGCGGCTTCTATaGCCTTCTTGGGTCCCTGCA +
Preference number: 4 (lower is better)
Translates to: PSVALKAGVLEAKLCWLQPRRLL*PSWVPA
Trigger: TGCAGGGACCCAAGAAGGGCATAGAAGCCGCCTGGG...CTGCAGCCAGCAGAGCTTAGCTTCAAGGACACCTGCCTTCAAAGCCACTGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp TCAATTCTGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGCTTCTTCCCCTGGGCTaGTCCCATGGCACGAAGTGG +
Preference number: 4 (lower is better)
Translates to: SILPEKAPVLGSEPLAGRLLPLG*SHGTKW
Trigger: CCACTTCGTGCCATGGGAGCAGCCCAGGGGAAGAAG...CCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CCCTCAGTGGCTTTGAAGGCAGGTGTCCTTGAAGCTAAGCTCTGCTGGCTGCAGTCTGCCCGCTCCCTCTaGATCTCCGAGTACATGGCG +
Preference number: 4 (lower is better)
Translates to: PSVALKAGVLEAKLCWLQSARSL*ISEYMA
Trigger: CGCCATGTACTCGGAGATCCAGAGGGAGCGGGCAGA...CTGCAGCCAGCAGAGCTTAGCTTCAAGGACACCTGCCTTCAAAGCCACTGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp GTGGGAAGGCCTGGGCAGAACAGAAGGCTTGTCAAGTCAGAGGGCCACCTCTTCGACACGCTGCAGCTCTaGCTTGCTGTCCACACCAAG +
Preference number: 4 (lower is better)
Translates to: VGRPGQNRRLVKSEGHLFDTLQL*LAVHTK
Trigger: CTTGGTGTGGACAGCAAGCCAGAGCTGCAGCGTGTC...GAAGAGGTGGCCCTCTGACTTGACAAGCCTTCTGTTCTGCCCAGGCCTTCCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CAATTCTGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGGGACACGCTGCAGCTCTaGCTTGCTGTCCACACCAAG +
Preference number: 4 (lower is better)
Translates to: QFCQRKLLCWALNPLQGGDTLQL*LAVHTK
Trigger: CTTGGTGTGGACAGCAAGCCAGAGCTGCAGCGTGTC...CCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp AATGGCAGAGGGAGGACTCAGGCCAGGAGTGGACTCTTAGTCCAGTGCTCTGTCGGCACTGCAGCCGCTTaGCTTCCAGCTCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: NGRGRTQARSGLLVQCSVGTAAA*LPAPPS
Trigger: AGAAGGAGGAGCTGGAAGCCAAGCGGCTGCAGTGCC...GACAGAGCACTGGACTAAGAGTCCACTCCTGGCCTGAGTCCTCCCTCTGCCATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464064.5
CDS-3UTR CCA 90 bp GTCTTTGTTAGTCCCCGCCCACCTGGCCGGGATGCCAGCAACAAGGCCATCTGCGCTCTCTCTCTTCGCTaGTCAGTGTGGCAATTCTCC +
Preference number: 4 (lower is better)
Translates to: VFVSPRPPGRDASNKAICALSLR*SVWQFS
Trigger: GGAGAATTGCCACACTGACCAGCGAAGAGAGAGAGC...GCAGATGGCCTTGTTGCTGGCATCCCGGCCAGGTGGGCGGGGACTAACAAAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TCGGAGATTCCTGGTGGGAAGGCCTGGGCAGAACAGAAGGCTTGTCAAGTCAGACCTGAGCCCGGCAGCTaGCCCTACAGCTCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: SEIPGGKAWAEQKACQVRPEPGS*PYSSLS
Trigger: AGAGAGAGAGCTGTAGGGCCAGCTGCCGGGCTCAGG...TCTGACTTGACAAGCCTTCTGTTCTGCCCAGGCCTTCCCACCAGGAATCTCCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp GTGGGAAGGCCTGGGCAGAACAGAAGGCTTGTCAAGTCAGAGGGCCACCTCTTCCTCGGAGATTCCTGGTaGGAAGGCCTGGGCAGAACA +
Preference number: 4 (lower is better)
Translates to: VGRPGQNRRLVKSEGHLFLGDSW*EGLGRT
Trigger: TGTTCTGCCCAGGCCTTCCCACCAGGAATCTCCGAG...GAAGAGGTGGCCCTCTGACTTGACAAGCCTTCTGTTCTGCCCAGGCCTTCCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CCCTCAGTGGCTTTGAAGGCAGGTGTCCTTGAAGCTAAGCTCTGCTGGCTGCAGAGCCTCGGAGATTCCTaGTGGGAAGGCCTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: PSVALKAGVLEAKLCWLQSLGDS*WEGLGR
Trigger: TCTGCCCAGGCCTTCCCACCAGGAATCTCCGAGGCT...CTGCAGCCAGCAGAGCTTAGCTTCAAGGACACCTGCCTTCAAAGCCACTGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGGGTGCAGAATATATATCAGCCCTaGGCACTCTCGCCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: CQRKLLCWALNPLQGGVQNIYQP*ALSPCC
Trigger: GCAGCAGGGCGAGAGTGCCCAGGGCTGATATATATT...CTGCACCCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CCCTCAGTGGCTTTGAAGGCAGGTGTCCTTGAAGCTAAGCTCTGCTGGCTGCAGTGGGGTGGGAATCCCTaGGGCATCAGTCCACAGGAG +
Preference number: 4 (lower is better)
Translates to: PSVALKAGVLEAKLCWLQWGGNP*GISPQE
Trigger: CTCCTGTGGACTGATGCCCCAGGGATTCCCACCCCA...CTGCAGCCAGCAGAGCTTAGCTTCAAGGACACCTGCCTTCAAAGCCACTGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CCAGCAGCCTCCGCCTTACCTGGGAGCTTGTTAGAAATGCAGGATCTCCCAGATCTGGGGTTGCAGAAGTaGGGTGGGAATCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: PAASALPGSLLEMQDLPDLGLQK*GGNPWG
Trigger: GCCCCAGGGATTCCCACCCCACTTCTGCAACCCCAG...ATCTGGGAGATCCTGCATTTCTAACAAGCTCCCAGGTAAGGCGGAGGCTGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TCGGAGATTCCTGGTGGGAAGGCCTGGGCAGAACAGAAGGCTTGTCAAGTCAGACTGGGGTTGCAGAAGTaGGGTGGGAATCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: SEIPGGKAWAEQKACQVRLGLQK*GGNPWG
Trigger: GCCCCAGGGATTCCCACCCCACTTCTGCAACCCCAG...TCTGACTTGACAAGCCTTCTGTTCTGCCCAGGCCTTCCCACCAGGAATCTCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp AGTGGCCTGAGCCCGGCAGCTGGCCCTACAGCTCTCTCTCTTCGCTGGTCAGTGGAGTCTGGGATGGGGTaGATAATGAAGGATACCTGG +
Preference number: 4 (lower is better)
Translates to: SGLSPAAGPTALSLRWSVESGMG*IMKDTW
Trigger: CCAGGTATCCTTCATTATCCACCCCATCCCAGACTC...CACTGACCAGCGAAGAGAGAGAGCTGTAGGGCCAGCTGCCGGGCTCAGGCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464064.5
CDS-3UTR CCA 90 bp CCAGGGCTGCCAGGTACAGAAGGGCTGAAGGAGGCTGTCCAGGCCAGGGTGGGCAGTGGCAGCTATCTGTaGCAGTTTTGGGAAAGTGAA +
Preference number: 4 (lower is better)
Translates to: PGLPGTEGLKEAVQARVGSGSYL*QFWESE
Trigger: TTCACTTTCCCAAAACTGCCACAGATAGCTGCCACT...GCCCACCCTGGCCTGGACAGCCTCCTTCAGCCCTTCTGTACCTGGCAGCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp GGAATGCGGCAGCCCTGGGTAGGTGTGGTTAGAAGGCCTGGACGGGGAGGCTGTTGTCTGAACAACACATaGACCCGAGGGCTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: GMRQPWVGVVRRPGRGGCCLNNT*TRGLLL
Trigger: AAGAAGCAGCCCTCGGGTCCATGTGTTGTTCAGACA...ACAGCCTCCCCGTCCAGGCCTTCTAACCACACCTACCCAGGGCTGCCGCATTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TTCCTGGTGGGAAGGCCTGGGCAGAACAGAAGGCTTGTCAAGTCAGAGGGCCACACCTCTGGGGACCACTaGGTGAATCCCCAGGCATTC +
Preference number: 4 (lower is better)
Translates to: FLVGRPGQNRRLVKSEGHTSGDH*VNPQAF
Trigger: GAATGCCTGGGGATTCACCCAGTGGTCCCCAGAGGT...GTGGCCCTCTGACTTGACAAGCCTTCTGTTCTGCCCAGGCCTTCCCACCAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TCTGCCCTGCCCTTCCTCCCCTCAGTGGCTTTGAAGGCAGGTGTCCTTGAAGCTTCCATGGAGCACCTCTaGGGACCACTGGGTGAATCC +
Preference number: 4 (lower is better)
Translates to: SALPFLPSVALKAGVLEASMEHL*GPLGES
Trigger: GGATTCACCCAGTGGTCCCCAGAGGTGCTCCATGGA...AGCTTCAAGGACACCTGCCTTCAAAGCCACTGAGGGGAGGAAGGGCAGGGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp AACCACAGGTGGGGGAGTTCTCTGAGACCTAGGAGCTGGGGTGTACGGAGAAGCGACTTGTTGCCTCCATaGAGCACCTCTGGGGACCAC +
Preference number: 4 (lower is better)
Translates to: NHRWGSSLRPRSWGVRRSDLLPP*STSGDH
Trigger: GTGGTCCCCAGAGGTGCTCCATGGAGGCAACAAGTC...GCTTCTCCGTACACCCCAGCTCCTAGGTCTCAGAGAACTCCCCCACCTGTGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp GTGGGAAGGCCTGGGCAGAACAGAAGGCTTGTCAAGTCAGAGGGCCACCTCTTCCGGTTCTTAAACCCCTaGGAACGGAGGCTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: VGRPGQNRRLVKSEGHLFRFLNP*ERRLLS
Trigger: GCTCAGCAGCCTCCGTTCCCAGGGGTTTAAGAACCG...GAAGAGGTGGCCCTCTGACTTGACAAGCCTTCTGTTCTGCCCAGGCCTTCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649301.1
CDS-3UTR TCA 90 bp TCCTCCTCAATTCTGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCACAGGTACAGAAGGGCTaGAGGAGGCTGTCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: SSSILPEKAPVLGSEPLAQVQKG*RRLSRP
Trigger: TGGCCTGGACAGCCTCCTTCAGCCCTTCTGTACCTG...TGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTGAGGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR TCA 90 bp CCAGCAGCCTCCGCCTTACCTGGGAGCTTGTTAGAAATGCAGGATCTCCCAGATCAGGTACAGAAGGGCTaGAGGAGGCTGTCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: PAASALPGSLLEMQDLPDQVQKG*RRLSRP
Trigger: TGGCCTGGACAGCCTCCTTCAGCCCTTCTGTACCTG...ATCTGGGAGATCCTGCATTTCTAACAAGCTCCCAGGTAAGGCGGAGGCTGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR TCA 90 bp TTTGTGAGGCACCGCTGCAGACTTCTGAGTGCAGGAATGCGGCAGCCCTGGGTACCAGGCCCTCTGGGGTaGCACATTTCTACAGAAGCA +
Preference number: 4 (lower is better)
Translates to: FVRHRCRLLSAGMRQPWVPGPLG*HISTEA
Trigger: TGCTTCTGTAGAAATGTGTCACCCCAGAGGGCCTGG...TACCCAGGGCTGCCGCATTCCTGCACTCAGAAGTCTGCAGCGGTGCCTCACAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR TCA 90 bp GAAAAATGGGTGAATTCACTGGAGTTGGCCCAGCTAGGGGTTGGGTCTCAGGTGGGTGGGGGAGTTCTCTaGGACCTAGGAGCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: EKWVNSLELAQLGVGSQVGGGVL*DLGAGV
Trigger: CACCCCAGCTCCTAGGTCTCAGAGAACTCCCCCACC...CACCTGAGACCCAACCCCTAGCTGGGCCAACTCCAGTGAATTCACCCATTTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR TCA 90 bp GTGGGAAGGCCTGGGCAGAACAGAAGGCTTGTCAAGTCAGAGGGCCACCTCTTCTCCCCTCAGTGGCTTTaGAGGCAGGTGTCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: VGRPGQNRRLVKSEGHLFSPQWL*RQVSLK
Trigger: CTTCAAGGACACCTGCCTTCAAAGCCACTGAGGGGA...GAAGAGGTGGCCCTCTGACTTGACAAGCCTTCTGTTCTGCCCAGGCCTTCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR TCA 90 bp CAATTCTGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGGTCCCCTCAGTGGCTTTaGAGGCAGGTGTCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: QFCQRKLLCWALNPLQGGSPQWL*RQVSLK
Trigger: CTTCAAGGACACCTGCCTTCAAAGCCACTGAGGGGA...CCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR TCA 90 bp GTCTTTGTTAGTCCCCGCCCACCTGGCCGGGATGCCAGCAACAAGGCCATCTGCGAGCCTCTTGGAGCTTaGCTTATACACACGCACACA +
Preference number: 4 (lower is better)
Translates to: VFVSPRPPGRDASNKAICEPLGA*LIHTHT
Trigger: TGTGTGCGTGTGTATAAGTCAAGCTCCAAGAGGCTC...GCAGATGGCCTTGTTGCTGGCATCCCGGCCAGGTGGGCGGGGACTAACAAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR TCA 90 bp GGAATGCGGCAGCCCTGGGTAGGTGTGGTTAGAAGGCCTGGACGGGGAGGCTGTTTCTCTTCACATGTCTaGACAACACATGGACCCGAG +
Preference number: 4 (lower is better)
Translates to: GMRQPWVGVVRRPGRGGCFSSHV*TTHGPE
Trigger: CTCGGGTCCATGTGTTGTTCAGACATGTGAAGAGAA...ACAGCCTCCCCGTCCAGGCCTTCTAACCACACCTACCCAGGGCTGCCGCATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR TCA 90 bp TCTGCCCTGCCCTTCCTCCCCTCAGTGGCTTTGAAGGCAGGTGTCCTTGAAGCTACGACCCCTGAAAAGTaGACCAAGGTCGTCTGCACG +
Preference number: 4 (lower is better)
Translates to: SALPFLPSVALKAGVLEATTPEK*TKVVCT
Trigger: CGTGCAGACGACCTTGGTTCACTTTTCAGGGGTCGT...AGCTTCAAGGACACCTGCCTTCAAAGCCACTGAGGGGAGGAAGGGCAGGGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR TCA 90 bp CACAGGAGGTGGGGGCCAGCGATGGCTTCAGGGGTGATATTTCCAATATATATCCCTCCCTGCTGGCGTTaGTCTCAGGAGCCAGGACCC +
Preference number: 4 (lower is better)
Translates to: HRRWGPAMASGVIFPIYIPPCWR*SQEPGP
Trigger: GGGTCCTGGCTCCTGAGATCAACGCCAGCAGGGAGG...GATATATATTGGAAATATCACCCCTGAAGCCATCGCTGGCCCCCACCTCCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp GAAAAATGGGTGAATTCACTGGAGTTGGCCCAGCTAGGGGTTGGGTCTCAGGTGGCTGCAGCTCTGGCTTaGTGTCCACACCAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: EKWVNSLELAQLGVGSQVAAALA*CPHQGP
Trigger: GGGGCCTTGGTGTGGACAGCAAGCCAGAGCTGCAGC...CACCTGAGACCCAACCCCTAGCTGGGCCAACTCCAGTGAATTCACCCATTTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR GCA 90 bp AGGGAGGACTCAGGCCAGGAGTGGACTCTTAGTCCAGTGCTCTGTCTGCTGATCTGCTCTAGGACACGCTaGAGCTCTGGCTTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: REDSGQEWTLSPVLCLLICSRTR*SSGLLS
Trigger: GGACAGCAAGCCAGAGCTGCAGCGTGTCCTAGAGCA...GATCAGCAGACAGAGCACTGGACTAAGAGTCCACTCCTGGCCTGAGTCCTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464064.5
CDS-3UTR GCA 90 bp TCCTCCTCAATTCTGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCATGCTCAAAGGGGCACTaGAGCCGCTTGGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: SSSILPEKAPVLGSEPLACSKGH*SRLASS
Trigger: GCTGGAAGCCAAGCGGCTGCAGTGCCCCTTTGAGCA...TGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTGAGGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp TCGGAGATTCCTGGTGGGAAGGCCTGGGCAGAACAGAAGGCTTGTCAAGTCAGACGTCTCAGCAGCTCCTaGTCAAAGGGGCACTGCAGC +
Preference number: 4 (lower is better)
Translates to: SEIPGGKAWAEQKACQVRRLSSS*SKGHCS
Trigger: GCTGCAGTGCCCCTTTGAGCAGGAGCTGCTGAGACG...TCTGACTTGACAAGCCTTCTGTTCTGCCCAGGCCTTCCCACCAGGAATCTCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp TTCCTGGTGGGAAGGCCTGGGCAGAACAGAAGGCTTGTCAAGTCAGAGGGCCACCAGAGAAAGCTCCTGTaGTGGGCTCTGAACCCCTTG +
Preference number: 4 (lower is better)
Translates to: FLVGRPGQNRRLVKSEGHQRKLL*WALNPL
Trigger: CAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTG...GTGGCCCTCTGACTTGACAAGCCTTCTGTTCTGCCCAGGCCTTCCCACCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp TCGGAGATTCCTGGTGGGAAGGCCTGGGCAGAACAGAAGGCTTGTCAAGTCAGAATCTGCAGTCTGCCCTaGCCTTCCTCCCCTCAGTGG +
Preference number: 4 (lower is better)
Translates to: SEIPGGKAWAEQKACQVRICSLP*PSSPQW
Trigger: CCACTGAGGGGAGGAAGGGCAGGGCAGACTGCAGAT...TCTGACTTGACAAGCCTTCTGTTCTGCCCAGGCCTTCCCACCAGGAATCTCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp TCAATTCTGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGCTGCAGACTTCTGAGTaGAGGAATGCGGCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: SILPEKAPVLGSEPLAGRLQTSE*RNAAAL
Trigger: CAGGGCTGCCGCATTCCTGCACTCAGAAGTCTGCAG...CCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp TCGGAGATTCCTGGTGGGAAGGCCTGGGCAGAACAGAAGGCTTGTCAAGTCAGAGCACTCTCGCCCTGCTaGTCACAGCATGGTCCTCAC +
Preference number: 4 (lower is better)
Translates to: SEIPGGKAWAEQKACQVRALSPC*SQHGPH
Trigger: GTGAGGACCATGCTGTGAGCAGCAGGGCGAGAGTGC...TCTGACTTGACAAGCCTTCTGTTCTGCCCAGGCCTTCCCACCAGGAATCTCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp GGAATGCGGCAGCCCTGGGTAGGTGTGGTTAGAAGGCCTGGACGGGGAGGCTGTAGGAATCAAAGAGCATaGCAGTGGCAGCTATCTGTG +
Preference number: 4 (lower is better)
Translates to: GMRQPWVGVVRRPGRGGCRNQRA*QWQLSV
Trigger: CACAGATAGCTGCCACTGGCATGCTCTTTGATTCCT...ACAGCCTCCCCGTCCAGGCCTTCTAACCACACCTACCCAGGGCTGCCGCATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR GCA 90 bp CAATTTGCTAGGCCAAAGTCTTCACGGGCAATCCCTGGGGTGGGAGTCTGGGATTCTGGGAGGGCTGCGTaGGGATGTCAGCTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: QFARPKSSRAIPGVGVWDSGRAA*GCQLQL
Trigger: CAGCTGAAGCTGACATCCGCACGCAGCCCTCCCAGA...ATCCCAGACTCCCACCCCAGGGATTGCCCGTGAAGACTTTGGCCTAGCAAATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp CAATTTGCTAGGCCAAAGTCTTCACGGGCAATCCCTGGGGTGGGAGTCTGGGATACCTGGTTCAGCCTCTaGTGCCGTCTCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: QFARPKSSRAIPGVGVWDTWFSL*CRLSSS
Trigger: GGAGCTGCTGAGACGGCAGCAGAGGCTGAACCAGGT...ATCCCAGACTCCCACCCCAGGGATTGCCCGTGAAGACTTTGGCCTAGCAAATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464064.5
CDS-3UTR GCA 90 bp GCAGCCTCCGCCTTACCTGGGAGCTTGTTAGAAATGCAGGATCTCCCAGATCTAGTGGTCCCTGCTGGGTaGCCATCACCCACCTGGTTC +
Preference number: 4 (lower is better)
Translates to: AASALPGSLLEMQDLPDLVVPAG*PSPTWF
Trigger: GAACCAGGTGGGTGATGGGCACCCAGCAGGGACCAC...TAGATCTGGGAGATCCTGCATTTCTAACAAGCTCCCAGGTAAGGCGGAGGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464064.5
CDS-3UTR GCA 90 bp TCGGAGATTCCTGGTGGGAAGGCCTGGGCAGAACAGAAGGCTTGTCAAGTCAGACCCTTCTTGGGTCCCTaGAGCTCCTCACCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: SEIPGGKAWAEQKACQVRPFLGP*SSSPPR
Trigger: TCTGGGAGGTGAGGAGCTGCAGGGACCCAAGAAGGG...TCTGACTTGACAAGCCTTCTGTTCTGCCCAGGCCTTCCCACCAGGAATCTCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CCCTCAGTGGCTTTGAAGGCAGGTGTCCTTGAAGCTAAGCTCTGCTGGCTGCAGGACACGCTGCAGCTCTaGCTTGCTGTCCACACCAAG +
Preference number: 4 (lower is better)
Translates to: PSVALKAGVLEAKLCWLQDTLQL*LAVHTK
Trigger: CTTGGTGTGGACAGCAAGCCAGAGCTGCAGCGTGTC...CTGCAGCCAGCAGAGCTTAGCTTCAAGGACACCTGCCTTCAAAGCCACTGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TCAATTCTGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGGACACGCTGCAGCTCTaGCTTGCTGTCCACACCAAG +
Preference number: 4 (lower is better)
Translates to: SILPEKAPVLGSEPLAGRDTLQL*LAVHTK
Trigger: CTTGGTGTGGACAGCAAGCCAGAGCTGCAGCGTGTC...CCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CAATTTGCTAGGCCAAAGTCTTCACGGGCAATCCCTGGGGTGGGAGTCTGGGATGGCACTGCAGCCGCTTaGCTTCCAGCTCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: QFARPKSSRAIPGVGVWDGTAAA*LPAPPS
Trigger: AGAAGGAGGAGCTGGAAGCCAAGCGGCTGCAGTGCC...ATCCCAGACTCCCACCCCAGGGATTGCCCGTGAAGACTTTGGCCTAGCAAATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TCTGCCCTGCCCTTCCTCCCCTCAGTGGCTTTGAAGGCAGGTGTCCTTGAAGCTGGTGGTTTTTCCAGCTaGTTCAGCCTCTGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: SALPFLPSVALKAGVLEAGGFSS*FSLCCR
Trigger: ACGGCAGCAGAGGCTGAACCAGCTGGAAAAACCACC...AGCTTCAAGGACACCTGCCTTCAAAGCCACTGAGGGGAGGAAGGGCAGGGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGGGTGCAGCTTCGCTGGTCAGTGTaGCAATTCTCCGCAGGTTTT +
Preference number: 4 (lower is better)
Translates to: CQRKLLCWALNPLQGGVQLRWSV*QFSAGF
Trigger: AAAACCTGCGGAGAATTGCCACACTGACCAGCGAAG...CTGCACCCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp GTGGGAAGGCCTGGGCAGAACAGAAGGCTTGTCAAGTCAGAGGGCCACCTCTTCGAGAGCCAGGCCCTCTaGGGTGACACATTTCTACAG +
Preference number: 4 (lower is better)
Translates to: VGRPGQNRRLVKSEGHLFESQAL*GDTFLQ
Trigger: CTGTAGAAATGTGTCACCCCAGAGGGCCTGGCTCTC...GAAGAGGTGGCCCTCTGACTTGACAAGCCTTCTGTTCTGCCCAGGCCTTCCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TTCCTGGTGGGAAGGCCTGGGCAGAACAGAAGGCTTGTCAAGTCAGAGGGCCACTTGGAGCAGGAGGGCTaGGTGCTTGGAAGGAAAACC +
Preference number: 4 (lower is better)
Translates to: FLVGRPGQNRRLVKSEGHLEQEG*VLGRKT
Trigger: GGTTTTCCTTCCAAGCACCCAGCCCTCCTGCTCCAA...GTGGCCCTCTGACTTGACAAGCCTTCTGTTCTGCCCAGGCCTTCCCACCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TCGGAGATTCCTGGTGGGAAGGCCTGGGCAGAACAGAAGGCTTGTCAAGTCAGAGCAGGTTATCCCTCTTaGAGCAGGAGGGCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: SEIPGGKAWAEQKACQVRAGYPS*SRRAGC
Trigger: GCACCCAGCCCTCCTGCTCCAAGAGGGATAACCTGC...TCTGACTTGACAAGCCTTCTGTTCTGCCCAGGCCTTCCCACCAGGAATCTCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CAATTCTGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGGAGAAAGCTCCTGTGCTaGGCTCTGAACCCCTTGCAG +
Preference number: 4 (lower is better)
Translates to: QFCQRKLLCWALNPLQGGRKLLC*ALNPLQ
Trigger: CTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCT...CCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TCGGAGATTCCTGGTGGGAAGGCCTGGGCAGAACAGAAGGCTTGTCAAGTCAGACTGAGACCTAGGAGCTaGGGTGTACGGAGAAGCGGG +
Preference number: 4 (lower is better)
Translates to: SEIPGGKAWAEQKACQVRLRPRS*GVRRSG
Trigger: CCCGCTTCTCCGTACACCCCAGCTCCTAGGTCTCAG...TCTGACTTGACAAGCCTTCTGTTCTGCCCAGGCCTTCCCACCAGGAATCTCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TCAATTCTGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGGGAATGCGGCAGCCCTaGGTAGGTGTGGTTAGAAGG +
Preference number: 4 (lower is better)
Translates to: SILPEKAPVLGSEPLAGRGMRQP*VGVVRR
Trigger: CCTTCTAACCACACCTACCCAGGGCTGCCGCATTCC...CCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp GTCTTTGTTAGTCCCCGCCCACCTGGCCGGGATGCCAGCAACAAGGCCATCTGCAGCCTCCGCCTTACCTaGGAGCTTGTTAGAAATGCA +
Preference number: 4 (lower is better)
Translates to: VFVSPRPPGRDASNKAICSLRLT*ELVRNA
Trigger: TGCATTTCTAACAAGCTCCCAGGTAAGGCGGAGGCT...GCAGATGGCCTTGTTGCTGGCATCCCGGCCAGGTGGGCGGGGACTAACAAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TCAATTCTGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGGTTGCAGAAGTGGGGTaGGAATCCCTGGGGCATCAG +
Preference number: 4 (lower is better)
Translates to: SILPEKAPVLGSEPLAGRVAEVG*ESLGHQ
Trigger: CTGATGCCCCAGGGATTCCCACCCCACTTCTGCAAC...CCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CTACAGAAGCAGGTGGGAACATCACAGACGTCCCAGGGCCTGGGGCCCAGGGCTATAATGAAGGATACCTaGGGTTGCAGAAGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: LQKQVGTSQTSQGLGPRAIMKDT*GCRSGV
Trigger: CACCCCACTTCTGCAACCCCAGGTATCCTTCATTAT...AGCCCTGGGCCCCAGGCCCTGGGACGTCTGTGATGTTCCCACCTGCTTCTGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CTACAGAAGCAGGTGGGAACATCACAGACGTCCCAGGGCCTGGGGCCCAGGGCTCGAGGGCTGCTTCTTTaGGGAAGTGGTGATCTTTAT +
Preference number: 4 (lower is better)
Translates to: LQKQVGTSQTSQGLGPRARGLLL*GSGDLY
Trigger: ATAAAGATCACCACTTCCCCAAAGAAGCAGCCCTCG...AGCCCTGGGCCCCAGGCCCTGGGACGTCTGTGATGTTCCCACCTGCTTCTGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGGGTGCAGTACAGCCTCCACAGTTaGAGTGGCTGGAGATACAGA +
Preference number: 4 (lower is better)
Translates to: CQRKLLCWALNPLQGGVQYSLHS*SGWRYR
Trigger: TCTGTATCTCCAGCCACTCCAACTGTGGAGGCTGTA...CTGCACCCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CCCAGGGCTGCCAGGTACAGAAGGGCTGAAGGAGGCTGTCCAGGCCAGGGTGGGAGCTGCAAAGGAGACTaGAACAGTGAAAATCTGGAT +
Preference number: 4 (lower is better)
Translates to: PRAARYRRAEGGCPGQGGSCKGD*NSENLD
Trigger: ATCCAGATTTTCACTGTTCCAGTCTCCTTTGCAGCT...CCCACCCTGGCCTGGACAGCCTCCTTCAGCCCTTCTGTACCTGGCAGCCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp GTCTTTGTTAGTCCCCGCCCACCTGGCCGGGATGCCAGCAACAAGGCCATCTGCAAAACCTGTGGAGTTTaGACCAAGGGCCCACTCAGT +
Preference number: 4 (lower is better)
Translates to: VFVSPRPPGRDASNKAICKTCGV*TKGPLS
Trigger: ACTGAGTGGGCCCTTGGTCCAAACTCCACAGGTTTT...GCAGATGGCCTTGTTGCTGGCATCCCGGCCAGGTGGGCGGGGACTAACAAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464064.5
CDS-3UTR CCA 90 bp CCAGCAGCCTCCGCCTTACCTGGGAGCTTGTTAGAAATGCAGGATCTCCCAGATGCCTTCTCACCTTGCTaGGCACCACTCAGCCGACAG +
Preference number: 4 (lower is better)
Translates to: PAASALPGSLLEMQDLPDAFSPC*APLSRQ
Trigger: CTGTCGGCTGAGTGGTGCCCAGCAAGGTGAGAAGGC...ATCTGGGAGATCCTGCATTTCTAACAAGCTCCCAGGTAAGGCGGAGGCTGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474531.5
ENST00000649301.1
CDS-3UTR TCA 90 bp CCAGTTATGAGTAAGACCAGAACAATCCCTTTCCTCCGACAGTCCCACGTTTGCCGGTGGAGCTCCTGGTaGCTCCGAGAGGCCTTCACG +
Preference number: 4 (lower is better)
Translates to: PVMSKTRTIPFLRQSHVCRWSSW*LREAFT
Trigger: CGTGAAGGCCTCTCGGAGTCACCAGGAGCTCCACCG...GCAAACGTGGGACTGTCGGAGGAAAGGGATTGTTCTGGTCTTACTCATAACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR TCA 90 bp TTCCTGGTGGGAAGGCCTGGGCAGAACAGAAGGCTTGTCAAGTCAGAGGGCCACATAAACTCGGGGGCGTaGTCCTCTTCCTTCTCTGGT +
Preference number: 4 (lower is better)
Translates to: FLVGRPGQNRRLVKSEGHINSGA*SSSFSG
Trigger: ACCAGAGAAGGAAGAGGATCACGCCCCCGAGTTTAT...GTGGCCCTCTGACTTGACAAGCCTTCTGTTCTGCCCAGGCCTTCCCACCAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR TCA 90 bp GCCCAGGGAGGTGTTAGCCATGCCTGTGTCTTTTATTGGAAAAGCTTTCCCAGATCCTGTGCTGGGCTCTaGACCCCTTGCAGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: AQGGVSHACVFYWKSFPRSCAGL*TPCREG
Trigger: CCCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGA...TCTGGGAAAGCTTTTCCAATAAAAGACACAGGCATGGCTAACACCTCCCTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR TCA 90 bp CCAGTTATGAGTAAGACCAGAACAATCCCTTTCCTCCGACAGTCCCACGTTTGCTCCTGTGCTGGGCTCTaGACCCCTTGCAGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: PVMSKTRTIPFLRQSHVCSCAGL*TPCREG
Trigger: CCCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGA...GCAAACGTGGGACTGTCGGAGGAAAGGGATTGTTCTGGTCTTACTCATAACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR TCA 90 bp TGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGGGTGCAGTTCTCTTCACATGTCTaGACAACACATGGACCCGAG +
Preference number: 4 (lower is better)
Translates to: CQRKLLCWALNPLQGGVQFSSHV*TTHGPE
Trigger: CTCGGGTCCATGTGTTGTTCAGACATGTGAAGAGAA...CTGCACCCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR TCA 90 bp CCAGCAGCCTCCGCCTTACCTGGGAGCTTGTTAGAAATGCAGGATCTCCCAGATGAGCCCTCGTCCATCTaGGACCCTCTGTCTTGCTTC +
Preference number: 4 (lower is better)
Translates to: PAASALPGSLLEMQDLPDEPSSI*DPLSCF
Trigger: GAAGCAAGACAGAGGGTCTCAGATGGACGAGGGCTC...ATCTGGGAGATCCTGCATTTCTAACAAGCTCCCAGGTAAGGCGGAGGCTGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR TCA 90 bp GCTTTGAAGGCAGGTGTCCTTGAAGCTAAGCTCTGCTGGCTGCAGGTAAAACCAGGAGGGCGTGGTGCTTaGGGTCCCTTCTACCTCTGG +
Preference number: 4 (lower is better)
Translates to: ALKAGVLEAKLCWLQVKPGGRGA*GPFYLW
Trigger: CCAGAGGTAGAAGGGACCTCAAGCACCACGCCCTCC...TGGTTTTACCTGCAGCCAGCAGAGCTTAGCTTCAAGGACACCTGCCTTCAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR TCA 90 bp AACCACAGGTGGGGGAGTTCTCTGAGACCTAGGAGCTGGGGTGTACGGAGAAGCAGTTGGGACGACCCCTaGAAAGTGAACCAAGGTCGT +
Preference number: 4 (lower is better)
Translates to: NHRWGSSLRPRSWGVRRSSWDDP*KVNQGR
Trigger: ACGACCTTGGTTCACTTTTCAGGGGTCGTCCCAACT...GCTTCTCCGTACACCCCAGCTCCTAGGTCTCAGAGAACTCCCCCACCTGTGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR TCA 90 bp CAATTCTGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGGAAGGACCTAGCAAAGTaGATGGCAGAGGGAGGACTC +
Preference number: 4 (lower is better)
Translates to: QFCQRKLLCWALNPLQGGKDLAK*MAEGGL
Trigger: GAGTCCTCCCTCTGCCATTCACTTTGCTAGGTCCTT...CCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464064.5
CDS-3UTR TCA 90 bp TTCCTGGTGGGAAGGCCTGGGCAGAACAGAAGGCTTGTCAAGTCAGAGGGCCACGGTGGTTTTTCCAGCTaGAGGAGGGAGAAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: FLVGRPGQNRRLVKSEGHGGFSS*RREKQR
Trigger: TCTCTGCTTCTCCCTCCTTCAGCTGGAAAAACCACC...GTGGCCCTCTGACTTGACAAGCCTTCTGTTCTGCCCAGGCCTTCCCACCAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464064.5
CDS-3UTR GCA 90 bp CACAGCATGGTCCTCACACCAGCAGCCTCCGCCTTACCTGGGAGCTTGTTAGAAAAGTCAGGAGCGTGTTaGTGGGTTCCTCACTCCACC +
Preference number: 4 (lower is better)
Translates to: HSMVLTPAASALPGSLLEKSGAC*WVPHST
Trigger: GGTGGAGTGAGGAACCCAGCAACACGCTCCTGACTT...TTCTAACAAGCTCCCAGGTAAGGCGGAGGCTGCTGGTGTGAGGACCATGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000649301.1
CDS-3UTR GCA 90 bp TCGGAGATTCCTGGTGGGAAGGCCTGGGCAGAACAGAAGGCTTGTCAAGTCAGATGCTCTAGGACACGCTaGAGCTCTGGCTTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: SEIPGGKAWAEQKACQVRCSRTR*SSGLLS
Trigger: GGACAGCAAGCCAGAGCTGCAGCGTGTCCTAGAGCA...TCTGACTTGACAAGCCTTCTGTTCTGCCCAGGCCTTCCCACCAGGAATCTCCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp ATTTACAGCCTCCACAGTTGGAGTGGCTGGAGATACAGAGTTGGGACGACCCCTCGTCTCAGCAGCTCCTaGTCAAAGGGGCACTGCAGC +
Preference number: 4 (lower is better)
Translates to: IYSLHSWSGWRYRVGTTPRLSSS*SKGHCS
Trigger: GCTGCAGTGCCCCTTTGAGCAGGAGCTGCTGAGACG...AGGGGTCGTCCCAACTCTGTATCTCCAGCCACTCCAACTGTGGAGGCTGTAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR GCA 90 bp GTCCACAGGAGGTGGGGGCCAGCGATGGCTTCAGGGGTGATATTTCCAATATATCGTCTCAGCAGCTCCTaGTCAAAGGGGCACTGCAGC +
Preference number: 4 (lower is better)
Translates to: VHRRWGPAMASGVIFPIYRLSSS*SKGHCS
Trigger: GCTGCAGTGCCCCTTTGAGCAGGAGCTGCTGAGACG...ATATATTGGAAATATCACCCCTGAAGCCATCGCTGGCCCCCACCTCCTGTGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp GCAGCCTCCGCCTTACCTGGGAGCTTGTTAGAAATGCAGGATCTCCCAGATCTATGGTTCAGCCTCTGCTaGCGTCTCAGCAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: AASALPGSLLEMQDLPDLWFSLC*RLSSSC
Trigger: GCAGGAGCTGCTGAGACGGCAGCAGAGGCTGAACCA...TAGATCTGGGAGATCCTGCATTTCTAACAAGCTCCCAGGTAAGGCGGAGGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp CCCTCAGTGGCTTTGAAGGCAGGTGTCCTTGAAGCTAAGCTCTGCTGGCTGCAGAGCAGGAGGGCTGGGTaGTTGGAAGGAAAACCTAGG +
Preference number: 4 (lower is better)
Translates to: PSVALKAGVLEAKLCWLQSRRAG*LEGKPR
Trigger: CCTAGGTTTTCCTTCCAAGCACCCAGCCCTCCTGCT...CTGCAGCCAGCAGAGCTTAGCTTCAAGGACACCTGCCTTCAAAGCCACTGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp CCCTCAGTGGCTTTGAAGGCAGGTGTCCTTGAAGCTAAGCTCTGCTGGCTGCAGCAGAGAAAGCTCCTGTaGTGGGCTCTGAACCCCTTG +
Preference number: 4 (lower is better)
Translates to: PSVALKAGVLEAKLCWLQQRKLL*WALNPL
Trigger: CAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTG...CTGCAGCCAGCAGAGCTTAGCTTCAAGGACACCTGCCTTCAAAGCCACTGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp CACAGCATGGTCCTCACACCAGCAGCCTCCGCCTTACCTGGGAGCTTGTTAGAACAGAGAAAGCTCCTGTaGTGGGCTCTGAACCCCTTG +
Preference number: 4 (lower is better)
Translates to: HSMVLTPAASALPGSLLEQRKLL*WALNPL
Trigger: CAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTG...TTCTAACAAGCTCCCAGGTAAGGCGGAGGCTGCTGGTGTGAGGACCATGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp TGTGAGGCACCGCTGCAGACTTCTGAGTGCAGGAATGCGGCAGCCCTGGGTAGGCTTGAAGCTAAGCTCTaGTGGCTGCAGGTAAAACCA +
Preference number: 4 (lower is better)
Translates to: CEAPLQTSECRNAAALGRLEAKL*WLQVKP
Trigger: TGGTTTTACCTGCAGCCAGCAGAGCTTAGCTTCAAG...CCTACCCAGGGCTGCCGCATTCCTGCACTCAGAAGTCTGCAGCGGTGCCTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp TGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGGGTGCAGCTTGAAGCTAAGCTCTaGTGGCTGCAGGTAAAACCA +
Preference number: 4 (lower is better)
Translates to: CQRKLLCWALNPLQGGVQLEAKL*WLQVKP
Trigger: TGGTTTTACCTGCAGCCAGCAGAGCTTAGCTTCAAG...CTGCACCCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp GAAAAATGGGTGAATTCACTGGAGTTGGCCCAGCTAGGGGTTGGGTCTCAGGTGTGGGCACTCTCGCCCTaGTGCTCACAGCATGGTCCT +
Preference number: 4 (lower is better)
Translates to: EKWVNSLELAQLGVGSQVWALSP*CSQHGP
Trigger: AGGACCATGCTGTGAGCAGCAGGGCGAGAGTGCCCA...CACCTGAGACCCAACCCCTAGCTGGGCCAACTCCAGTGAATTCACCCATTTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR GCA 90 bp TTTGTGAGGCACCGCTGCAGACTTCTGAGTGCAGGAATGCGGCAGCCCTGGGTAAAGGATACCTGGGGTTaGAGAAGTGGGGTGGGAATC +
Preference number: 4 (lower is better)
Translates to: FVRHRCRLLSAGMRQPWVKDTWG*RSGVGI
Trigger: GATTCCCACCCCACTTCTGCAACCCCAGGTATCCTT...TACCCAGGGCTGCCGCATTCCTGCACTCAGAAGTCTGCAGCGGTGCCTCACAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp GCAGCCTCCGCCTTACCTGGGAGCTTGTTAGAAATGCAGGATCTCCCAGATCTACCCTGGAGGGCGTGGTaGTTGAGGTCCCTTCTACCT +
Preference number: 4 (lower is better)
Translates to: AASALPGSLLEMQDLPDLPWRAW*LRSLLP
Trigger: AGGTAGAAGGGACCTCAAGCACCACGCCCTCCAGGG...TAGATCTGGGAGATCCTGCATTTCTAACAAGCTCCCAGGTAAGGCGGAGGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR GCA 90 bp TCAAAGAGCATGCCAGTGGCAGCTATCTGTGGCAGTTTTGGGAAAGTGAAAGGAGGTCGTCTGCACGGCTaGCCTGGAGGGCGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: SKSMPVAAICGSFGKVKGGRLHG*PGGRGA
Trigger: AGCACCACGCCCTCCAGGGCAGCCGTGCAGACGACC...TCCTTTCACTTTCCCAAAACTGCCACAGATAGCTGCCACTGGCATGCTCTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CAATTTGCTAGGCCAAAGTCTTCACGGGCAATCCCTGGGGTGGGAGTCTGGGATCTCAGGTCGAGTCCTTaGGAAGGGAAGTCAGGAGCG +
Preference number: 4 (lower is better)
Translates to: QFARPKSSRAIPGVGVWDLRSSP*EGKSGA
Trigger: CGCTCCTGACTTCCCTTCCCAAGGACTCGACCTGAG...ATCCCAGACTCCCACCCCAGGGATTGCCCGTGAAGACTTTGGCCTAGCAAATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000649301.1
CDS-3UTR CCA 90 bp GCAGCCTCCGCCTTACCTGGGAGCTTGTTAGAAATGCAGGATCTCCCAGATCTATCTGCCCGCTCCCTCTaGATCTCCGAGTACATGGCG +
Preference number: 4 (lower is better)
Translates to: AASALPGSLLEMQDLPDLSARSL*ISEYMA
Trigger: CGCCATGTACTCGGAGATCCAGAGGGAGCGGGCAGA...TAGATCTGGGAGATCCTGCATTTCTAACAAGCTCCCAGGTAAGGCGGAGGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TCAATTCTGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGTTCTTCTTGATGAGCTaGTTCCGCCGGCGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: SILPEKAPVLGSEPLAGRFFLMS*FRRRCS
Trigger: AGAGCACCGCCGGCGGAACCAGCTCATCAAGAAGAA...CCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CACAGCATGGTCCTCACACCAGCAGCCTCCGCCTTACCTGGGAGCTTGTTAGAAGGTGGTTTTTCCAGCTaGTTCAGCCTCTGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: HSMVLTPAASALPGSLLEGGFSS*FSLCCR
Trigger: ACGGCAGCAGAGGCTGAACCAGCTGGAAAAACCACC...TTCTAACAAGCTCCCAGGTAAGGCGGAGGCTGCTGGTGTGAGGACCATGCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CAGGGAGGGGTGCAGGTTATCCCTCTTGGAGCAGGAGGGCTGGGTGCTTGGAAGCTCTTCCTTCTCTGGTaGTTTTTCCAGCTGGTTCAG +
Preference number: 4 (lower is better)
Translates to: QGGVQVIPLGAGGLGAWKLFLLW*FFQLVQ
Trigger: CTGAACCAGCTGGAAAAACCACCAGAGAAGGAAGAG...CTTCCAAGCACCCAGCCCTCCTGCTCCAAGAGGGATAACCTGCACCCCTCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CAATTCTGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGGGCTCTCTCTCTTCGCTaGTCAGTGTGGCAATTCTCC +
Preference number: 4 (lower is better)
Translates to: QFCQRKLLCWALNPLQGGALSLR*SVWQFS
Trigger: GGAGAATTGCCACACTGACCAGCGAAGAGAGAGAGC...CCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TTCCTGGTGGGAAGGCCTGGGCAGAACAGAAGGCTTGTCAAGTCAGAGGGCCACGCTCTCTCTCTTCGCTaGTCAGTGTGGCAATTCTCC +
Preference number: 4 (lower is better)
Translates to: FLVGRPGQNRRLVKSEGHALSLR*SVWQFS
Trigger: GGAGAATTGCCACACTGACCAGCGAAGAGAGAGAGC...GTGGCCCTCTGACTTGACAAGCCTTCTGTTCTGCCCAGGCCTTCCCACCAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp GCTCACAGCATGGTCCTCACACCAGCAGCCTCCGCCTTACCTGGGAGCTTGTTAGCTCTCTCTCTTCGCTaGTCAGTGTGGCAATTCTCC +
Preference number: 4 (lower is better)
Translates to: AHSMVLTPAASALPGSLLALSLR*SVWQFS
Trigger: GGAGAATTGCCACACTGACCAGCGAAGAGAGAGAGC...TAACAAGCTCCCAGGTAAGGCGGAGGCTGCTGGTGTGAGGACCATGCTGTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp GAAAAATGGGTGAATTCACTGGAGTTGGCCCAGCTAGGGGTTGGGTCTCAGGTGGCAGGTTATCCCTCTTaGAGCAGGAGGGCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: EKWVNSLELAQLGVGSQVAGYPS*SRRAGC
Trigger: GCACCCAGCCCTCCTGCTCCAAGAGGGATAACCTGC...CACCTGAGACCCAACCCCTAGCTGGGCCAACTCCAGTGAATTCACCCATTTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CCAGCAGCCTCCGCCTTACCTGGGAGCTTGTTAGAAATGCAGGATCTCCCAGATCCTGGTGGGAAGGCCTaGGCAGAACAGAAGGCTTGT +
Preference number: 4 (lower is better)
Translates to: PAASALPGSLLEMQDLPDPGGKA*AEQKAC
Trigger: ACAAGCCTTCTGTTCTGCCCAGGCCTTCCCACCAGG...ATCTGGGAGATCCTGCATTTCTAACAAGCTCCCAGGTAAGGCGGAGGCTGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CCAGCAGCCTCCGCCTTACCTGGGAGCTTGTTAGAAATGCAGGATCTCCCAGATCTCGGAGATTCCTGGTaGGAAGGCCTGGGCAGAACA +
Preference number: 4 (lower is better)
Translates to: PAASALPGSLLEMQDLPDLGDSW*EGLGRT
Trigger: TGTTCTGCCCAGGCCTTCCCACCAGGAATCTCCGAG...ATCTGGGAGATCCTGCATTTCTAACAAGCTCCCAGGTAAGGCGGAGGCTGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp GTCCACAGGAGGTGGGGGCCAGCGATGGCTTCAGGGGTGATATTTCCAATATATAGCCTCGGAGATTCCTaGTGGGAAGGCCTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: VHRRWGPAMASGVIFPIYSLGDS*WEGLGR
Trigger: TCTGCCCAGGCCTTCCCACCAGGAATCTCCGAGGCT...ATATATTGGAAATATCACCCCTGAAGCCATCGCTGGCCCCCACCTCCTGTGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TCCTACTCTGAAAACCTGTGGAGTTTGGACCAAGGGCCCACTCAGTGGGGAAACAGCCTCGGAGATTCCTaGTGGGAAGGCCTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: SYSENLWSLDQGPTQWGNSLGDS*WEGLGR
Trigger: TCTGCCCAGGCCTTCCCACCAGGAATCTCCGAGGCT...GTTTCCCCACTGAGTGGGCCCTTGGTCCAAACTCCACAGGTTTTCAGAGTAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464064.5
CDS-3UTR CCA 90 bp GTGGGAAGGCCTGGGCAGAACAGAAGGCTTGTCAAGTCAGAGGGCCACCTCTTCAATATATATCAGCCCTaGGCACTCTCGCCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: VGRPGQNRRLVKSEGHLFNIYQP*ALSPCC
Trigger: GCAGCAGGGCGAGAGTGCCCAGGGCTGATATATATT...GAAGAGGTGGCCCTCTGACTTGACAAGCCTTCTGTTCTGCCCAGGCCTTCCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp GCTCACAGCATGGTCCTCACACCAGCAGCCTCCGCCTTACCTGGGAGCTTGTTAAATATATATCAGCCCTaGGCACTCTCGCCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: AHSMVLTPAASALPGSLLNIYQP*ALSPCC
Trigger: GCAGCAGGGCGAGAGTGCCCAGGGCTGATATATATT...TAACAAGCTCCCAGGTAAGGCGGAGGCTGCTGGTGTGAGGACCATGCTGTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp GCTTTGAAGGCAGGTGTCCTTGAAGCTAAGCTCTGCTGGCTGCAGGTAAAACCAGGCCCAGCTAGGGGTTaGGTCTCAGGTGACAGAGGC +
Preference number: 4 (lower is better)
Translates to: ALKAGVLEAKLCWLQVKPGPARG*VSGDRG
Trigger: GCCTCTGTCACCTGAGACCCAACCCCTAGCTGGGCC...TGGTTTTACCTGCAGCCAGCAGAGCTTAGCTTCAAGGACACCTGCCTTCAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp ATGAGTAAGACCAGAACAATCCCTTTCCTCCGACAGTCCCACGTTTGCTTCCAGTCTGCACGGCTGCCCTaGAGGGCGTGGTGCTTGAGG +
Preference number: 4 (lower is better)
Translates to: MSKTRTIPFLRQSHVCFQSARLP*RAWCLR
Trigger: CCTCAAGCACCACGCCCTCCAGGGCAGCCGTGCAGA...CTGGAAGCAAACGTGGGACTGTCGGAGGAAAGGGATTGTTCTGGTCTTACTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp GTGGGAAGGCCTGGGCAGAACAGAAGGCTTGTCAAGTCAGAGGGCCACCTCTTCCACAGTTGGAGTGGCTaGAGATACAGAGTTGGGACG +
Preference number: 4 (lower is better)
Translates to: VGRPGQNRRLVKSEGHLFHSWSG*RYRVGT
Trigger: CGTCCCAACTCTGTATCTCCAGCCACTCCAACTGTG...GAAGAGGTGGCCCTCTGACTTGACAAGCCTTCTGTTCTGCCCAGGCCTTCCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TTTGTGAGGCACCGCTGCAGACTTCTGAGTGCAGGAATGCGGCAGCCCTGGGTACCTCCACAGTTGGAGTaGCTGGAGATACAGAGTTGG +
Preference number: 4 (lower is better)
Translates to: FVRHRCRLLSAGMRQPWVPPQLE*LEIQSW
Trigger: CCAACTCTGTATCTCCAGCCACTCCAACTGTGGAGG...TACCCAGGGCTGCCGCATTCCTGCACTCAGAAGTCTGCAGCGGTGCCTCACAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp GTCTTTGTTAGTCCCCGCCCACCTGGCCGGGATGCCAGCAACAAGGCCATCTGCGGATCTCCGAGTACATaGCGGCCTTATTGTCTAACT +
Preference number: 4 (lower is better)
Translates to: VFVSPRPPGRDASNKAICGSPST*RPYCLT
Trigger: AGTTAGACAATAAGGCCGCCATGTACTCGGAGATCC...GCAGATGGCCTTGTTGCTGGCATCCCGGCCAGGTGGGCGGGGACTAACAAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TTCCTGGTGGGAAGGCCTGGGCAGAACAGAAGGCTTGTCAAGTCAGAGGGCCACTATCAGCCTGGTAGCTaGGGCACAGAGCATGAGACT +
Preference number: 4 (lower is better)
Translates to: FLVGRPGQNRRLVKSEGHYQPGS*GTEHET
Trigger: AGTCTCATGCTCTGTGCCCCAGCTACCAGGCTGATA...GTGGCCCTCTGACTTGACAAGCCTTCTGTTCTGCCCAGGCCTTCCCACCAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464064.5
CDS-3UTR CCA 90 bp TCAATTCTGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGCAAGGGCCCACTCAGTaGGGAAACAGAACCAACCTG +
Preference number: 4 (lower is better)
Translates to: SILPEKAPVLGSEPLAGRQGPTQ*GNRTNL
Trigger: CAGGTTGGTTCTGTTTCCCCACTGAGTGGGCCCTTG...CCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464064.5
CDS-3UTR CCA 90 bp CCCTCAGTGGCTTTGAAGGCAGGTGTCCTTGAAGCTAAGCTCTGCTGGCTGCAGCTTCTATGCCCTTCTTaGGTCCCTGCAGCTCCTCAC +
Preference number: 4 (lower is better)
Translates to: PSVALKAGVLEAKLCWLQLLCPS*VPAAPH
Trigger: GTGAGGAGCTGCAGGGACCCAAGAAGGGCATAGAAG...CTGCAGCCAGCAGAGCTTAGCTTCAAGGACACCTGCCTTCAAAGCCACTGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TCACATAACCAACACAATTTGCTAGGCCAAAGTCTTCACGGGCAATCCCTGGGGTCCCATGGCACGAAGTaGGCACCAGGCCTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: SHNQHNLLGQSLHGQSLGSHGTK*APGLGG
Trigger: CCCACCCAGGCCTGGTGCCCACTTCGTGCCATGGGA...CCCCAGGGATTGCCCGTGAAGACTTTGGCCTAGCAAATTGTGTTGGTTATGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TCACATAACCAACACAATTTGCTAGGCCAAAGTCTTCACGGGCAATCCCTGGGGCCTGGGCTGCTCCCATaGCACGAAGTGGGCACCAGG +
Preference number: 4 (lower is better)
Translates to: SHNQHNLLGQSLHGQSLGPGLLP*HEVGTR
Trigger: CCTGGTGCCCACTTCGTGCCATGGGAGCAGCCCAGG...CCCCAGGGATTGCCCGTGAAGACTTTGGCCTAGCAAATTGTGTTGGTTATGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474531.5
ENST00000649301.1
CDS-3UTR TCA 90 bp CCAGCAGCCTCCGCCTTACCTGGGAGCTTGTTAGAAATGCAGGATCTCCCAGATCCAGGCCCTCTGGGGTaGCACATTTCTACAGAAGCA +
Preference number: 4 (lower is better)
Translates to: PAASALPGSLLEMQDLPDPGPLG*HISTEA
Trigger: TGCTTCTGTAGAAATGTGTCACCCCAGAGGGCCTGG...ATCTGGGAGATCCTGCATTTCTAACAAGCTCCCAGGTAAGGCGGAGGCTGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR TCA 90 bp CCAGTTATGAGTAAGACCAGAACAATCCCTTTCCTCCGACAGTCCCACGTTTGCGGTGGGGGAGTTCTCTaGGACCTAGGAGCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: PVMSKTRTIPFLRQSHVCGGGVL*DLGAGV
Trigger: CACCCCAGCTCCTAGGTCTCAGAGAACTCCCCCACC...GCAAACGTGGGACTGTCGGAGGAAAGGGATTGTTCTGGTCTTACTCATAACTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR TCA 90 bp CCCAGGGCTGCCAGGTACAGAAGGGCTGAAGGAGGCTGTCCAGGCCAGGGTGGGATCTCCCAGATCTATTaGGTTAGAAGCTGTATTAAC +
Preference number: 4 (lower is better)
Translates to: PRAARYRRAEGGCPGQGGISQIY*VRSCIN
Trigger: GTTAATACAGCTTCTAACTCAATAGATCTGGGAGAT...CCCACCCTGGCCTGGACAGCCTCCTTCAGCCCTTCTGTACCTGGCAGCCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR TCA 90 bp TCAATTCTGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGTGGGGCTTCATGGAATaGCTTGTTGCCTCCATGGAG +
Preference number: 4 (lower is better)
Translates to: SILPEKAPVLGSEPLAGRWGFME*LVASME
Trigger: CTCCATGGAGGCAACAAGTCATTCCATGAAGCCCCA...CCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR TCA 90 bp CAGGAATCAAAGAGCATGCCAGTGGCAGCTATCTGTGGCAGTTTTGGGAAAGTGGGAGGGCGTGGTGCTTaGGGTCCCTTCTACCTCTGG +
Preference number: 4 (lower is better)
Translates to: QESKSMPVAAICGSFGKVGGRGA*GPFYLW
Trigger: CCAGAGGTAGAAGGGACCTCAAGCACCACGCCCTCC...CACTTTCCCAAAACTGCCACAGATAGCTGCCACTGGCATGCTCTTTGATTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR GCA 90 bp TCACATAACCAACACAATTTGCTAGGCCAAAGTCTTCACGGGCAATCCCTGGGGGCTGCAGCTCTGGCTTaGTGTCCACACCAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: SHNQHNLLGQSLHGQSLGAAALA*CPHQGP
Trigger: GGGGCCTTGGTGTGGACAGCAAGCCAGAGCTGCAGC...CCCCAGGGATTGCCCGTGAAGACTTTGGCCTAGCAAATTGTGTTGGTTATGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp GTCCACAGGAGGTGGGGGCCAGCGATGGCTTCAGGGGTGATATTTCCAATATATTGCTCTAGGACACGCTaGAGCTCTGGCTTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: VHRRWGPAMASGVIFPIYCSRTR*SSGLLS
Trigger: GGACAGCAAGCCAGAGCTGCAGCGTGTCCTAGAGCA...ATATATTGGAAATATCACCCCTGAAGCCATCGCTGGCCCCCACCTCCTGTGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp CACAGGAGGTGGGGGCCAGCGATGGCTTCAGGGGTGATATTTCCAATATATATCTGCTCAAAGGGGCACTaGAGCCGCTTGGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: HRRWGPAMASGVIFPIYICSKGH*SRLASS
Trigger: GCTGGAAGCCAAGCGGCTGCAGTGCCCCTTTGAGCA...GATATATATTGGAAATATCACCCCTGAAGCCATCGCTGGCCCCCACCTCCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp GCTTTGAAGGCAGGTGTCCTTGAAGCTAAGCTCTGCTGGCTGCAGGTAAAACCATGGTTCAGCCTCTGCTaGCGTCTCAGCAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: ALKAGVLEAKLCWLQVKPWFSLC*RLSSSC
Trigger: GCAGGAGCTGCTGAGACGGCAGCAGAGGCTGAACCA...TGGTTTTACCTGCAGCCAGCAGAGCTTAGCTTCAAGGACACCTGCCTTCAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp CACAGGAGGTGGGGGCCAGCGATGGCTTCAGGGGTGATATTTCCAATATATATCTGGTTCAGCCTCTGCTaGCGTCTCAGCAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: HRRWGPAMASGVIFPIYIWFSLC*RLSSSC
Trigger: GCAGGAGCTGCTGAGACGGCAGCAGAGGCTGAACCA...GATATATATTGGAAATATCACCCCTGAAGCCATCGCTGGCCCCCACCTCCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp GCTTTGAAGGCAGGTGTCCTTGAAGCTAAGCTCTGCTGGCTGCAGGTAAAACCAAGCTGGTTCAGCCTCTaGTGCCGTCTCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: ALKAGVLEAKLCWLQVKPSWFSL*CRLSSS
Trigger: GGAGCTGCTGAGACGGCAGCAGAGGCTGAACCAGCT...TGGTTTTACCTGCAGCCAGCAGAGCTTAGCTTCAAGGACACCTGCCTTCAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp TCGGAGATTCCTGGTGGGAAGGCCTGGGCAGAACAGAAGGCTTGTCAAGTCAGAAGCAGGAGGGCTGGGTaGTTGGAAGGAAAACCTAGG +
Preference number: 4 (lower is better)
Translates to: SEIPGGKAWAEQKACQVRSRRAG*LEGKPR
Trigger: CCTAGGTTTTCCTTCCAAGCACCCAGCCCTCCTGCT...TCTGACTTGACAAGCCTTCTGTTCTGCCCAGGCCTTCCCACCAGGAATCTCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp GAAAAATGGGTGAATTCACTGGAGTTGGCCCAGCTAGGGGTTGGGTCTCAGGTGCCTTGCAGGGAGGGGTaGAGGTTATCCCTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: EKWVNSLELAQLGVGSQVPCREG*RLSLLE
Trigger: CTCCAAGAGGGATAACCTGCACCCCTCCCTGCAAGG...CACCTGAGACCCAACCCCTAGCTGGGCCAACTCCAGTGAATTCACCCATTTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR GCA 90 bp AAATGGGTGAATTCACTGGAGTTGGCCCAGCTAGGGGTTGGGTCTCAGGTGACACCTTGCAGGGAGGGGTaGAGGTTATCCCTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: KWVNSLELAQLGVGSQVTPCREG*RLSLLE
Trigger: CTCCAAGAGGGATAACCTGCACCCCTCCCTGCAAGG...TGTCACCTGAGACCCAACCCCTAGCTGGGCCAACTCCAGTGAATTCACCCATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR GCA 90 bp CACAGGAGGTGGGGGCCAGCGATGGCTTCAGGGGTGATATTTCCAATATATATCATCTGCAGTCTGCCCTaGCCTTCCTCCCCTCAGTGG +
Preference number: 4 (lower is better)
Translates to: HRRWGPAMASGVIFPIYIICSLP*PSSPQW
Trigger: CCACTGAGGGGAGGAAGGGCAGGGCAGACTGCAGAT...GATATATATTGGAAATATCACCCCTGAAGCCATCGCTGGCCCCCACCTCCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp CAGGAATCAAAGAGCATGCCAGTGGCAGCTATCTGTGGCAGTTTTGGGAAAGTGCCCACCTGGCCGGGATaGCAGCAACAAGGCCATCTG +
Preference number: 4 (lower is better)
Translates to: QESKSMPVAAICGSFGKVPTWPG*QQQGHL
Trigger: CAGATGGCCTTGTTGCTGGCATCCCGGCCAGGTGGG...CACTTTCCCAAAACTGCCACAGATAGCTGCCACTGGCATGCTCTTTGATTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR GCA 90 bp GAAAAATGGGTGAATTCACTGGAGTTGGCCCAGCTAGGGGTTGGGTCTCAGGTGCTGCAGACTTCTGAGTaGAGGAATGCGGCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: EKWVNSLELAQLGVGSQVLQTSE*RNAAAL
Trigger: CAGGGCTGCCGCATTCCTGCACTCAGAAGTCTGCAG...CACCTGAGACCCAACCCCTAGCTGGGCCAACTCCAGTGAATTCACCCATTTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR GCA 90 bp TCCTACTCTGAAAACCTGTGGAGTTTGGACCAAGGGCCCACTCAGTGGGGAAACCTGCAGACTTCTGAGTaGAGGAATGCGGCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: SYSENLWSLDQGPTQWGNLQTSE*RNAAAL
Trigger: CAGGGCTGCCGCATTCCTGCACTCAGAAGTCTGCAG...GTTTCCCCACTGAGTGGGCCCTTGGTCCAAACTCCACAGGTTTTCAGAGTAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464064.5
CDS-3UTR GCA 90 bp CACAGGAGGTGGGGGCCAGCGATGGCTTCAGGGGTGATATTTCCAATATATATCGCACTCTCGCCCTGCTaGTCACAGCATGGTCCTCAC +
Preference number: 4 (lower is better)
Translates to: HRRWGPAMASGVIFPIYIALSPC*SQHGPH
Trigger: GTGAGGACCATGCTGTGAGCAGCAGGGCGAGAGTGC...GATATATATTGGAAATATCACCCCTGAAGCCATCGCTGGCCCCCACCTCCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp TCAATTCTGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGGCATTTACAGCCCTGTaGTGGCAGCACACACAGGAA +
Preference number: 4 (lower is better)
Translates to: SILPEKAPVLGSEPLAGRAFTAL*WQHTQE
Trigger: TTCCTGTGTGTGCTGCCAGCACAGGGCTGTAAATGC...CCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR GCA 90 bp TTTGTGAGGCACCGCTGCAGACTTCTGAGTGCAGGAATGCGGCAGCCCTGGGTACATGGAATGACTTGTTaGCTCCATGGAGCACCTCTG +
Preference number: 4 (lower is better)
Translates to: FVRHRCRLLSAGMRQPWVHGMTC*LHGAPL
Trigger: CAGAGGTGCTCCATGGAGGCAACAAGTCATTCCATG...TACCCAGGGCTGCCGCATTCCTGCACTCAGAAGTCTGCAGCGGTGCCTCACAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR GCA 90 bp CGCCTTACCTGGGAGCTTGTTAGAAATGCAGGATCTCCCAGATCTATTGAGTTAGGTCGTCTGCACGGCTaGCCTGGAGGGCGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: RLTWELVRNAGSPRSIELGRLHG*PGGRGA
Trigger: AGCACCACGCCCTCCAGGGCAGCCGTGCAGACGACC...TAACTCAATAGATCTGGGAGATCCTGCATTTCTAACAAGCTCCCAGGTAAGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR GCA 90 bp TTCCTGGTGGGAAGGCCTGGGCAGAACAGAAGGCTTGTCAAGTCAGAGGGCCACGAGGCTGCTGAAATGTaGCAACAAGTGAGACAGCCT +
Preference number: 4 (lower is better)
Translates to: FLVGRPGQNRRLVKSEGHEAAEM*QQVRQP
Trigger: AGGCTGTCTCACTTGTTGGCACATTTCAGCAGCCTC...GTGGCCCTCTGACTTGACAAGCCTTCTGTTCTGCCCAGGCCTTCCCACCAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394481.5
CDS-3UTR GCA 90 bp CAGGGAGGGGTGCAGGTTATCCCTCTTGGAGCAGGAGGGCTGGGTGCTTGGAAGATGAAATTCAGAGACTaGTGTGTCCTTCTCAGGTCG +
Preference number: 4 (lower is better)
Translates to: QGGVQVIPLGAGGLGAWKMKFRD*CVLLRS
Trigger: CGACCTGAGAAGGACACAGCAGTCTCTGAATTTCAT...CTTCCAAGCACCCAGCCCTCCTGCTCCAAGAGGGATAACCTGCACCCCTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394481.5
ENST00000649301.1
CDS-3UTR GCA 90 bp GTCCACAGGAGGTGGGGGCCAGCGATGGCTTCAGGGGTGATATTTCCAATATATTTGGCCTTCTCACCTTaGTGGGCACCACTCAGCCGA +
Preference number: 4 (lower is better)
Translates to: VHRRWGPAMASGVIFPIYLAFSP*WAPLSR
Trigger: TCGGCTGAGTGGTGCCCAGCAAGGTGAGAAGGCCAA...ATATATTGGAAATATCACCCCTGAAGCCATCGCTGGCCCCCACCTCCTGTGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp GCTTTGAAGGCAGGTGTCCTTGAAGCTAAGCTCTGCTGGCTGCAGGTAAAACCACCCTTCTTGGGTCCCTaGAGCTCCTCACCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: ALKAGVLEAKLCWLQVKPPFLGP*SSSPPR
Trigger: TCTGGGAGGTGAGGAGCTGCAGGGACCCAAGAAGGG...TGGTTTTACCTGCAGCCAGCAGAGCTTAGCTTCAAGGACACCTGCCTTCAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp GCTTTGAAGGCAGGTGTCCTTGAAGCTAAGCTCTGCTGGCTGCAGGTAAAACCATCTGCCCGCTCCCTCTaGATCTCCGAGTACATGGCG +
Preference number: 4 (lower is better)
Translates to: ALKAGVLEAKLCWLQVKPSARSL*ISEYMA
Trigger: CGCCATGTACTCGGAGATCCAGAGGGAGCGGGCAGA...TGGTTTTACCTGCAGCCAGCAGAGCTTAGCTTCAAGGACACCTGCCTTCAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CAATTTGCTAGGCCAAAGTCTTCACGGGCAATCCCTGGGGTGGGAGTCTGGGATGGTGGTTTTTCCAGCTaGTTCAGCCTCTGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: QFARPKSSRAIPGVGVWDGGFSS*FSLCCR
Trigger: ACGGCAGCAGAGGCTGAACCAGCTGGAAAAACCACC...ATCCCAGACTCCCACCCCAGGGATTGCCCGTGAAGACTTTGGCCTAGCAAATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp AATGGCAGAGGGAGGACTCAGGCCAGGAGTGGACTCTTAGTCCAGTGCTCTGTCGCTCTCTCTCTTCGCTaGTCAGTGTGGCAATTCTCC +
Preference number: 4 (lower is better)
Translates to: NGRGRTQARSGLLVQCSVALSLR*SVWQFS
Trigger: GGAGAATTGCCACACTGACCAGCGAAGAGAGAGAGC...GACAGAGCACTGGACTAAGAGTCCACTCCTGGCCTGAGTCCTCCCTCTGCCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464064.5
CDS-3UTR CCA 90 bp TCACATAACCAACACAATTTGCTAGGCCAAAGTCTTCACGGGCAATCCCTGGGGCCTGAGCCCGGCAGCTaGCCCTACAGCTCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: SHNQHNLLGQSLHGQSLGPEPGS*PYSSLS
Trigger: AGAGAGAGAGCTGTAGGGCCAGCTGCCGGGCTCAGG...CCCCAGGGATTGCCCGTGAAGACTTTGGCCTAGCAAATTGTGTTGGTTATGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TCCTCCTCAATTCTGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCATTGGAGCAGGAGGGCTaGGTGCTTGGAAGGAAAACC +
Preference number: 4 (lower is better)
Translates to: SSSILPEKAPVLGSEPLALEQEG*VLGRKT
Trigger: GGTTTTCCTTCCAAGCACCCAGCCCTCCTGCTCCAA...TGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTGAGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TCCTCCTCAATTCTGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAAGAAAGCTCCTGTGCTaGGCTCTGAACCCCTTGCAG +
Preference number: 4 (lower is better)
Translates to: SSSILPEKAPVLGSEPLARKLLC*ALNPLQ
Trigger: CTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCT...TGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTGAGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp GCAGCCTCCGCCTTACCTGGGAGCTTGTTAGAAATGCAGGATCTCCCAGATCTACTCGGAGATTCCTGGTaGGAAGGCCTGGGCAGAACA +
Preference number: 4 (lower is better)
Translates to: AASALPGSLLEMQDLPDLLGDSW*EGLGRT
Trigger: TGTTCTGCCCAGGCCTTCCCACCAGGAATCTCCGAG...TAGATCTGGGAGATCCTGCATTTCTAACAAGCTCCCAGGTAAGGCGGAGGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp GAAAAATGGGTGAATTCACTGGAGTTGGCCCAGCTAGGGGTTGGGTCTCAGGTGGGAATGCGGCAGCCCTaGGTAGGTGTGGTTAGAAGG +
Preference number: 4 (lower is better)
Translates to: EKWVNSLELAQLGVGSQVGMRQP*VGVVRR
Trigger: CCTTCTAACCACACCTACCCAGGGCTGCCGCATTCC...CACCTGAGACCCAACCCCTAGCTGGGCCAACTCCAGTGAATTCACCCATTTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp AACCACAGGTGGGGGAGTTCTCTGAGACCTAGGAGCTGGGGTGTACGGAGAAGCAGCCTCCGCCTTACCTaGGAGCTTGTTAGAAATGCA +
Preference number: 4 (lower is better)
Translates to: NHRWGSSLRPRSWGVRRSSLRLT*ELVRNA
Trigger: TGCATTTCTAACAAGCTCCCAGGTAAGGCGGAGGCT...GCTTCTCCGTACACCCCAGCTCCTAGGTCTCAGAGAACTCCCCCACCTGTGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TTTGTGAGGCACCGCTGCAGACTTCTGAGTGCAGGAATGCGGCAGCCCTGGGTAAGCCTCCGCCTTACCTaGGAGCTTGTTAGAAATGCA +
Preference number: 4 (lower is better)
Translates to: FVRHRCRLLSAGMRQPWVSLRLT*ELVRNA
Trigger: TGCATTTCTAACAAGCTCCCAGGTAAGGCGGAGGCT...TACCCAGGGCTGCCGCATTCCTGCACTCAGAAGTCTGCAGCGGTGCCTCACAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CACAGGAGGTGGGGGCCAGCGATGGCTTCAGGGGTGATATTTCCAATATATATCTGGGGTGGGAATCCCTaGGGCATCAGTCCACAGGAG +
Preference number: 4 (lower is better)
Translates to: HRRWGPAMASGVIFPIYIWGGNP*GISPQE
Trigger: CTCCTGTGGACTGATGCCCCAGGGATTCCCACCCCA...GATATATATTGGAAATATCACCCCTGAAGCCATCGCTGGCCCCCACCTCCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp ATTTACAGCCTCCACAGTTGGAGTGGCTGGAGATACAGAGTTGGGACGACCCCTGTTGCAGAAGTGGGGTaGGAATCCCTGGGGCATCAG +
Preference number: 4 (lower is better)
Translates to: IYSLHSWSGWRYRVGTTPVAEVG*ESLGHQ
Trigger: CTGATGCCCCAGGGATTCCCACCCCACTTCTGCAAC...AGGGGTCGTCCCAACTCTGTATCTCCAGCCACTCCAACTGTGGAGGCTGTAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TCACATAACCAACACAATTTGCTAGGCCAAAGTCTTCACGGGCAATCCCTGGGGCTGGGGTTGCAGAAGTaGGGTGGGAATCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: SHNQHNLLGQSLHGQSLGLGLQK*GGNPWG
Trigger: GCCCCAGGGATTCCCACCCCACTTCTGCAACCCCAG...CCCCAGGGATTGCCCGTGAAGACTTTGGCCTAGCAAATTGTGTTGGTTATGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TTTGTGAGGCACCGCTGCAGACTTCTGAGTGCAGGAATGCGGCAGCCCTGGGTAGAGTCTGGGATGGGGTaGATAATGAAGGATACCTGG +
Preference number: 4 (lower is better)
Translates to: FVRHRCRLLSAGMRQPWVESGMG*IMKDTW
Trigger: CCAGGTATCCTTCATTATCCACCCCATCCCAGACTC...TACCCAGGGCTGCCGCATTCCTGCACTCAGAAGTCTGCAGCGGTGCCTCACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp GGAATGCGGCAGCCCTGGGTAGGTGTGGTTAGAAGGCCTGGACGGGGAGGCTGTTATCTGTGGCAGTTTTaGGAAAGTGAAAGGAGATGC +
Preference number: 4 (lower is better)
Translates to: GMRQPWVGVVRRPGRGGCYLWQF*ESERRC
Trigger: GCATCTCCTTTCACTTTCCCAAAACTGCCACAGATA...ACAGCCTCCCCGTCCAGGCCTTCTAACCACACCTACCCAGGGCTGCCGCATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp AACCACAGGTGGGGGAGTTCTCTGAGACCTAGGAGCTGGGGTGTACGGAGAAGCTTTACAGCCCTGTGCTaGCAGCACACACAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: NHRWGSSLRPRSWGVRRSFTALC*QHTQEK
Trigger: CTTTTCCTGTGTGTGCTGCCAGCACAGGGCTGTAAA...GCTTCTCCGTACACCCCAGCTCCTAGGTCTCAGAGAACTCCCCCACCTGTGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CAGCTAGGGGTTGGGTCTCAGGTGACAGAGGCCGGGGATTCAGACTCAAAGGGGCGAGGGCTGCTTCTTTaGGGAAGTGGTGATCTTTAT +
Preference number: 4 (lower is better)
Translates to: QLGVGSQVTEAGDSDSKGRGLLL*GSGDLY
Trigger: ATAAAGATCACCACTTCCCCAAAGAAGCAGCCCTCG...CCCCTTTGAGTCTGAATCCCCGGCCTCTGTCACCTGAGACCCAACCCCTAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp AAATGGGTGAATTCACTGGAGTTGGCCCAGCTAGGGGTTGGGTCTCAGGTGACAACCTCTGGGGACCACTaGGTGAATCCCCAGGCATTC +
Preference number: 4 (lower is better)
Translates to: KWVNSLELAQLGVGSQVTTSGDH*VNPQAF
Trigger: GAATGCCTGGGGATTCACCCAGTGGTCCCCAGAGGT...TGTCACCTGAGACCCAACCCCTAGCTGGGCCAACTCCAGTGAATTCACCCATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp GAAAAATGGGTGAATTCACTGGAGTTGGCCCAGCTAGGGGTTGGGTCTCAGGTGTCCATGGAGCACCTCTaGGGACCACTGGGTGAATCC +
Preference number: 4 (lower is better)
Translates to: EKWVNSLELAQLGVGSQVSMEHL*GPLGES
Trigger: GGATTCACCCAGTGGTCCCCAGAGGTGCTCCATGGA...CACCTGAGACCCAACCCCTAGCTGGGCCAACTCCAGTGAATTCACCCATTTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp GTGGGAAGGCCTGGGCAGAACAGAAGGCTTGTCAAGTCAGAGGGCCACCTCTTCACCTCTGGGGCTTCATaGAATGACTTGTTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: VGRPGQNRRLVKSEGHLFTSGAS*NDLLPP
Trigger: TGGAGGCAACAAGTCATTCCATGAAGCCCCAGAGGT...GAAGAGGTGGCCCTCTGACTTGACAAGCCTTCTGTTCTGCCCAGGCCTTCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TCAATTCTGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGCACAGTTGGAGTGGCTaGAGATACAGAGTTGGGACG +
Preference number: 4 (lower is better)
Translates to: SILPEKAPVLGSEPLAGRHSWSG*RYRVGT
Trigger: CGTCCCAACTCTGTATCTCCAGCCACTCCAACTGTG...CCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TCAATTCTGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGCCTCCACAGTTGGAGTaGCTGGAGATACAGAGTTGG +
Preference number: 4 (lower is better)
Translates to: SILPEKAPVLGSEPLAGRPPQLE*LEIQSW
Trigger: CCAACTCTGTATCTCCAGCCACTCCAACTGTGGAGG...CCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp ACAAGATCCCCAGTGATTTTTATGCACAATCAAGTTTGTGAGGCACCGCTGCAGCGGGTGACCTCTGCCTaGCCCAGCGGGCAGGACTTG +
Preference number: 4 (lower is better)
Translates to: TRSPVIFMHNQVCEAPLQRVTSA*PSGQDL
Trigger: CAAGTCCTGCCCGCTGGGCCAGGCAGAGGTCACCCG...CTGCAGCGGTGCCTCACAAACTTGATTGTGCATAAAAATCACTGGGGATCTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TCGGAGATTCCTGGTGGGAAGGCCTGGGCAGAACAGAAGGCTTGTCAAGTCAGACTTCTATGCCCTTCTTaGGTCCCTGCAGCTCCTCAC +
Preference number: 4 (lower is better)
Translates to: SEIPGGKAWAEQKACQVRLLCPS*VPAAPH
Trigger: GTGAGGAGCTGCAGGGACCCAAGAAGGGCATAGAAG...TCTGACTTGACAAGCCTTCTGTTCTGCCCAGGCCTTCCCACCAGGAATCTCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474531.5
ENST00000649301.1
CDS-3UTR TCA 90 bp ACAAGATCCCCAGTGATTTTTATGCACAATCAAGTTTGTGAGGCACCGCTGCAGCGGTGGAGCTCCTGGTaGCTCCGAGAGGCCTTCACG +
Preference number: 4 (lower is better)
Translates to: TRSPVIFMHNQVCEAPLQRWSSW*LREAFT
Trigger: CGTGAAGGCCTCTCGGAGTCACCAGGAGCTCCACCG...CTGCAGCGGTGCCTCACAAACTTGATTGTGCATAAAAATCACTGGGGATCTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR TCA 90 bp TCGGAGATTCCTGGTGGGAAGGCCTGGGCAGAACAGAAGGCTTGTCAAGTCAGAATAAACTCGGGGGCGTaGTCCTCTTCCTTCTCTGGT +
Preference number: 4 (lower is better)
Translates to: SEIPGGKAWAEQKACQVRINSGA*SSSFSG
Trigger: ACCAGAGAAGGAAGAGGATCACGCCCCCGAGTTTAT...TCTGACTTGACAAGCCTTCTGTTCTGCCCAGGCCTTCCCACCAGGAATCTCCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR TCA 90 bp GCAGCCTCCGCCTTACCTGGGAGCTTGTTAGAAATGCAGGATCTCCCAGATCTACCAGGCCCTCTGGGGTaGCACATTTCTACAGAAGCA +
Preference number: 4 (lower is better)
Translates to: AASALPGSLLEMQDLPDLPGPLG*HISTEA
Trigger: TGCTTCTGTAGAAATGTGTCACCCCAGAGGGCCTGG...TAGATCTGGGAGATCCTGCATTTCTAACAAGCTCCCAGGTAAGGCGGAGGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR TCA 90 bp GTCCACAGGAGGTGGGGGCCAGCGATGGCTTCAGGGGTGATATTTCCAATATATTCCCCTCAGTGGCTTTaGAGGCAGGTGTCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: VHRRWGPAMASGVIFPIYSPQWL*RQVSLK
Trigger: CTTCAAGGACACCTGCCTTCAAAGCCACTGAGGGGA...ATATATTGGAAATATCACCCCTGAAGCCATCGCTGGCCCCCACCTCCTGTGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR TCA 90 bp TGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGGGTGCAGACAGGAAAGGCCTTCTaGAGAAGAAAAATGGGTGAA +
Preference number: 4 (lower is better)
Translates to: CQRKLLCWALNPLQGGVQTGKAF*RRKMGE
Trigger: TTCACCCATTTTTCTTCTTCAGAAGGCCTTTCCTGT...CTGCACCCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR TCA 90 bp CAGCTAGGGGTTGGGTCTCAGGTGACAGAGGCCGGGGATTCAGACTCAAAGGGGAGGAGACTGGAACAGTaGAAATCTGGATTTACAGCC +
Preference number: 4 (lower is better)
Translates to: QLGVGSQVTEAGDSDSKGRRLEQ*KSGFTA
Trigger: GGCTGTAAATCCAGATTTTCACTGTTCCAGTCTCCT...CCCCTTTGAGTCTGAATCCCCGGCCTCTGTCACCTGAGACCCAACCCCTAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR TCA 90 bp TTCCTGGTGGGAAGGCCTGGGCAGAACAGAAGGCTTGTCAAGTCAGAGGGCCACTTCATTGGCCACACCTaGTCACATAGCCATCCTAAG +
Preference number: 4 (lower is better)
Translates to: FLVGRPGQNRRLVKSEGHFIGHT*SHSHPK
Trigger: CTTAGGATGGCTATGTGATCAGGTGTGGCCAATGAA...GTGGCCCTCTGACTTGACAAGCCTTCTGTTCTGCCCAGGCCTTCCCACCAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR GCA 90 bp GCCTGTGTCTTTTATTGGAAAAGCTTTCCCAGAAGCCCAGGTAGACTTCCTCTTTGGTTCCGCCGGCGGTaGTCTAGGACACGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: ACVFYWKSFPRSPGRLPLWFRRR*SRTRCS
Trigger: GCTGCAGCGTGTCCTAGAGCACCGCCGGCGGAACCA...AAGAGGAAGTCTACCTGGGCTTCTGGGAAAGCTTTTCCAATAAAAGACACAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR GCA 90 bp CAGGAATCAAAGAGCATGCCAGTGGCAGCTATCTGTGGCAGTTTTGGGAAAGTGTGCTCAAAGGGGCACTaGAGCCGCTTGGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: QESKSMPVAAICGSFGKVCSKGH*SRLASS
Trigger: GCTGGAAGCCAAGCGGCTGCAGTGCCCCTTTGAGCA...CACTTTCCCAAAACTGCCACAGATAGCTGCCACTGGCATGCTCTTTGATTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR GCA 90 bp GGCCAGTCCATAAAGGTGGCAGTGGGGTCTTCAAACCACTGTTTCTATTCCAGATGGTTCAGCCTCTGCTaGCGTCTCAGCAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: GQSIKVAVGSSNHCFYSRWFSLC*RLSSSC
Trigger: GCAGGAGCTGCTGAGACGGCAGCAGAGGCTGAACCA...TCTGGAATAGAAACAGTGGTTTGAAGACCCCACTGCCACCTTTATGGACTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR GCA 90 bp GCTTTGAAGGCAGGTGTCCTTGAAGCTAAGCTCTGCTGGCTGCAGGTAAAACCACCTTGCAGGGAGGGGTaGAGGTTATCCCTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: ALKAGVLEAKLCWLQVKPPCREG*RLSLLE
Trigger: CTCCAAGAGGGATAACCTGCACCCCTCCCTGCAAGG...TGGTTTTACCTGCAGCCAGCAGAGCTTAGCTTCAAGGACACCTGCCTTCAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp AAATGGGTGAATTCACTGGAGTTGGCCCAGCTAGGGGTTGGGTCTCAGGTGACACAGAGAAAGCTCCTGTaGTGGGCTCTGAACCCCTTG +
Preference number: 4 (lower is better)
Translates to: KWVNSLELAQLGVGSQVTQRKLL*WALNPL
Trigger: CAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTG...TGTCACCTGAGACCCAACCCCTAGCTGGGCCAACTCCAGTGAATTCACCCATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR GCA 90 bp CACAGCATGGTCCTCACACCAGCAGCCTCCGCCTTACCTGGGAGCTTGTTAGAACTTCCTCCTCAATTCTaGCAGAGAAAGCTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: HSMVLTPAASALPGSLLELPPQF*QRKLLC
Trigger: GCACAGGAGCTTTCTCTGGCAGAATTGAGGAGGAAG...TTCTAACAAGCTCCCAGGTAAGGCGGAGGCTGCTGGTGTGAGGACCATGCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp TCAAAGAGCATGCCAGTGGCAGCTATCTGTGGCAGTTTTGGGAAAGTGAAAGGACCCACCTGGCCGGGATaGCAGCAACAAGGCCATCTG +
Preference number: 4 (lower is better)
Translates to: SKSMPVAAICGSFGKVKGPTWPG*QQQGHL
Trigger: CAGATGGCCTTGTTGCTGGCATCCCGGCCAGGTGGG...TCCTTTCACTTTCCCAAAACTGCCACAGATAGCTGCCACTGGCATGCTCTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR GCA 90 bp CACAGGAGGTGGGGGCCAGCGATGGCTTCAGGGGTGATATTTCCAATATATATCCTGCAGACTTCTGAGTaGAGGAATGCGGCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: HRRWGPAMASGVIFPIYILQTSE*RNAAAL
Trigger: CAGGGCTGCCGCATTCCTGCACTCAGAAGTCTGCAG...GATATATATTGGAAATATCACCCCTGAAGCCATCGCTGGCCCCCACCTCCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp TCGGAGATTCCTGGTGGGAAGGCCTGGGCAGAACAGAAGGCTTGTCAAGTCAGAAAGGATACCTGGGGTTaGAGAAGTGGGGTGGGAATC +
Preference number: 4 (lower is better)
Translates to: SEIPGGKAWAEQKACQVRKDTWG*RSGVGI
Trigger: GATTCCCACCCCACTTCTGCAACCCCAGGTATCCTT...TCTGACTTGACAAGCCTTCTGTTCTGCCCAGGCCTTCCCACCAGGAATCTCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp CTACAGAAGCAGGTGGGAACATCACAGACGTCCCAGGGCCTGGGGCCCAGGGCTCACACTGGTAAGAAATaGAGATTGGCAATCATGTAC +
Preference number: 4 (lower is better)
Translates to: LQKQVGTSQTSQGLGPRAHTGKK*RLAIMY
Trigger: GTACATGATTGCCAATCTGCATTTCTTACCAGTGTG...AGCCCTGGGCCCCAGGCCCTGGGACGTCTGTGATGTTCCCACCTGCTTCTGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp TCCTCCTCAATTCTGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGCATTTACAGCCCTGTaGTGGCAGCACACACAGGAA +
Preference number: 4 (lower is better)
Translates to: SSSILPEKAPVLGSEPLAAFTAL*WQHTQE
Trigger: TTCCTGTGTGTGCTGCCAGCACAGGGCTGTAAATGC...TGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTGAGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp GCCCAGGGAGGTGTTAGCCATGCCTGTGTCTTTTATTGGAAAAGCTTTCCCAGATCAGGAGCGTGTTGCTaGGTTCCTCACTCCACCGGG +
Preference number: 4 (lower is better)
Translates to: AQGGVSHACVFYWKSFPRSGACC*VPHSTG
Trigger: CCCGGTGGAGTGAGGAACCCAGCAACACGCTCCTGA...TCTGGGAAAGCTTTTCCAATAAAAGACACAGGCATGGCTAACACCTCCCTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp GCCCAGGGAGGTGTTAGCCATGCCTGTGTCTTTTATTGGAAAAGCTTTCCCAGATCTGCCCGCTCCCTCTaGATCTCCGAGTACATGGCG +
Preference number: 4 (lower is better)
Translates to: AQGGVSHACVFYWKSFPRSARSL*ISEYMA
Trigger: CGCCATGTACTCGGAGATCCAGAGGGAGCGGGCAGA...TCTGGGAAAGCTTTTCCAATAAAAGACACAGGCATGGCTAACACCTCCCTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CAGGAATCAAAGAGCATGCCAGTGGCAGCTATCTGTGGCAGTTTTGGGAAAGTGTCTGCCCGCTCCCTCTaGATCTCCGAGTACATGGCG +
Preference number: 4 (lower is better)
Translates to: QESKSMPVAAICGSFGKVSARSL*ISEYMA
Trigger: CGCCATGTACTCGGAGATCCAGAGGGAGCGGGCAGA...CACTTTCCCAAAACTGCCACAGATAGCTGCCACTGGCATGCTCTTTGATTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CCAGTTATGAGTAAGACCAGAACAATCCCTTTCCTCCGACAGTCCCACGTTTGCCCAAGGCCCCTTCTGTaGTTCATGAGCAGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: PVMSKTRTIPFLRQSHVCPRPLL*FMSSSR
Trigger: CCGGGAGCTGCTCATGAACCACAGAAGGGGCCTTGG...GCAAACGTGGGACTGTCGGAGGAAAGGGATTGTTCTGGTCTTACTCATAACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CACAGGAGGTGGGGGCCAGCGATGGCTTCAGGGGTGATATTTCCAATATATATCGACACGCTGCAGCTCTaGCTTGCTGTCCACACCAAG +
Preference number: 4 (lower is better)
Translates to: HRRWGPAMASGVIFPIYIDTLQL*LAVHTK
Trigger: CTTGGTGTGGACAGCAAGCCAGAGCTGCAGCGTGTC...GATATATATTGGAAATATCACCCCTGAAGCCATCGCTGGCCCCCACCTCCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp GCAGCCTCCGCCTTACCTGGGAGCTTGTTAGAAATGCAGGATCTCCCAGATCTATTCTTCTTGATGAGCTaGTTCCGCCGGCGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: AASALPGSLLEMQDLPDLFFLMS*FRRRCS
Trigger: AGAGCACCGCCGGCGGAACCAGCTCATCAAGAAGAA...TAGATCTGGGAGATCCTGCATTTCTAACAAGCTCCCAGGTAAGGCGGAGGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CCAGTTATGAGTAAGACCAGAACAATCCCTTTCCTCCGACAGTCCCACGTTTGCGGCACTGCAGCCGCTTaGCTTCCAGCTCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: PVMSKTRTIPFLRQSHVCGTAAA*LPAPPS
Trigger: AGAAGGAGGAGCTGGAAGCCAAGCGGCTGCAGTGCC...GCAAACGTGGGACTGTCGGAGGAAAGGGATTGTTCTGGTCTTACTCATAACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp GTCCACAGGAGGTGGGGGCCAGCGATGGCTTCAGGGGTGATATTTCCAATATATGGTGGTTTTTCCAGCTaGTTCAGCCTCTGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: VHRRWGPAMASGVIFPIYGGFSS*FSLCCR
Trigger: ACGGCAGCAGAGGCTGAACCAGCTGGAAAAACCACC...ATATATTGGAAATATCACCCCTGAAGCCATCGCTGGCCCCCACCTCCTGTGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TCAATTCTGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGCTTCGCTGGTCAGTGTaGCAATTCTCCGCAGGTTTT +
Preference number: 4 (lower is better)
Translates to: SILPEKAPVLGSEPLAGRLRWSV*QFSAGF
Trigger: AAAACCTGCGGAGAATTGCCACACTGACCAGCGAAG...CCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CCCTCAGTGGCTTTGAAGGCAGGTGTCCTTGAAGCTAAGCTCTGCTGGCTGCAGCTTCGCTGGTCAGTGTaGCAATTCTCCGCAGGTTTT +
Preference number: 4 (lower is better)
Translates to: PSVALKAGVLEAKLCWLQLRWSV*QFSAGF
Trigger: AAAACCTGCGGAGAATTGCCACACTGACCAGCGAAG...CTGCAGCCAGCAGAGCTTAGCTTCAAGGACACCTGCCTTCAAAGCCACTGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp GCCCAGGGAGGTGTTAGCCATGCCTGTGTCTTTTATTGGAAAAGCTTTCCCAGACTGAGACCTAGGAGCTaGGGTGTACGGAGAAGCGGG +
Preference number: 4 (lower is better)
Translates to: AQGGVSHACVFYWKSFPRLRPRS*GVRRSG
Trigger: CCCGCTTCTCCGTACACCCCAGCTCCTAGGTCTCAG...TCTGGGAAAGCTTTTCCAATAAAAGACACAGGCATGGCTAACACCTCCCTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp GCTTTGAAGGCAGGTGTCCTTGAAGCTAAGCTCTGCTGGCTGCAGGTAAAACCAGGAATGCGGCAGCCCTaGGTAGGTGTGGTTAGAAGG +
Preference number: 4 (lower is better)
Translates to: ALKAGVLEAKLCWLQVKPGMRQP*VGVVRR
Trigger: CCTTCTAACCACACCTACCCAGGGCTGCCGCATTCC...TGGTTTTACCTGCAGCCAGCAGAGCTTAGCTTCAAGGACACCTGCCTTCAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TTTATGCACAATCAAGTTTGTGAGGCACCGCTGCAGACTTCTGAGTGCAGGAATTCTGCACGGCTGCCCTaGAGGGCGTGGTGCTTGAGG +
Preference number: 4 (lower is better)
Translates to: FMHNQVCEAPLQTSECRNSARLP*RAWCLR
Trigger: CCTCAAGCACCACGCCCTCCAGGGCAGCCGTGCAGA...ATTCCTGCACTCAGAAGTCTGCAGCGGTGCCTCACAAACTTGATTGTGCATAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TGTGAGGCACCGCTGCAGACTTCTGAGTGCAGGAATGCGGCAGCCCTGGGTAGGGGAACAGTGAAAATCTaGATTTACAGCCTCCACAGT +
Preference number: 4 (lower is better)
Translates to: CEAPLQTSECRNAAALGRGTVKI*IYSLHS
Trigger: ACTGTGGAGGCTGTAAATCCAGATTTTCACTGTTCC...CCTACCCAGGGCTGCCGCATTCCTGCACTCAGAAGTCTGCAGCGGTGCCTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp AAATGGGTGAATTCACTGGAGTTGGCCCAGCTAGGGGTTGGGTCTCAGGTGACAGTCATGGTAGCAAAGTaGCTGCTGTGGCTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: KWVNSLELAQLGVGSQVTVMVAK*LLWLQA
Trigger: TGCCTGGAGCCACAGCAGCCACTTTGCTACCATGAC...TGTCACCTGAGACCCAACCCCTAGCTGGGCCAACTCCAGTGAATTCACCCATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp GCAGCCTCCGCCTTACCTGGGAGCTTGTTAGAAATGCAGGATCTCCCAGATCTAGTCATGGTAGCAAAGTaGCTGCTGTGGCTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: AASALPGSLLEMQDLPDLVMVAK*LLWLQA
Trigger: TGCCTGGAGCCACAGCAGCCACTTTGCTACCATGAC...TAGATCTGGGAGATCCTGCATTTCTAACAAGCTCCCAGGTAAGGCGGAGGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TCGGAGATTCCTGGTGGGAAGGCCTGGGCAGAACAGAAGGCTTGTCAAGTCAGACGGTTCTTAAACCCCTaGGAACGGAGGCTGCTGAAA +
Preference number: 4 (lower is better)
Translates to: SEIPGGKAWAEQKACQVRRFLNP*ERRLLK
Trigger: TTTCAGCAGCCTCCGTTCCCAGGGGTTTAAGAACCG...TCTGACTTGACAAGCCTTCTGTTCTGCCCAGGCCTTCCCACCAGGAATCTCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394481.5
CDS-3UTR CCA 90 bp GTCCACAGGAGGTGGGGGCCAGCGATGGCTTCAGGGGTGATATTTCCAATATATGGATCTCCGAGTACATaGCGGCTGAGCCATTTCGTC +
Preference number: 4 (lower is better)
Translates to: VHRRWGPAMASGVIFPIYGSPST*RLSHFV
Trigger: GACGAAATGGCTCAGCCGCCATGTACTCGGAGATCC...ATATATTGGAAATATCACCCCTGAAGCCATCGCTGGCCCCCACCTCCTGTGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474531.5
CDS-3UTR CCA 90 bp GCAGCCTCCGCCTTACCTGGGAGCTTGTTAGAAATGCAGGATCTCCCAGATCTAGACTCAGGCCAGGAGTaGACTCTTAGTCCAGTGCTC +
Preference number: 4 (lower is better)
Translates to: AASALPGSLLEMQDLPDLDSGQE*TLSPVL
Trigger: GAGCACTGGACTAAGAGTCCACTCCTGGCCTGAGTC...TAGATCTGGGAGATCCTGCATTTCTAACAAGCTCCCAGGTAAGGCGGAGGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464064.5
CDS-3UTR CCA 90 bp CGCCTTACCTGGGAGCTTGTTAGAAATGCAGGATCTCCCAGATCTATTGAGTTATCCCATGGCACGAAGTaGGCACCAGGCCTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: RLTWELVRNAGSPRSIELSHGTK*APGLGG
Trigger: CCCACCCAGGCCTGGTGCCCACTTCGTGCCATGGGA...TAACTCAATAGATCTGGGAGATCCTGCATTTCTAACAAGCTCCCAGGTAAGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474531.5
ENST00000649301.1
3UTR CAA 72 bp GACCAGAACAATCCCTTTCCTCCGACAGTCCCACGTTaGCTTCCAGGAATCAAAGAGCATGCCAGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: DQNNPFPPTVPR*LPGIKEHASGS
Trigger: GCTGCCACTGGCATGCTCTTTGATTCCTGGAAGCAAACGTGGGACTGTCGGAGGAAAGGGATTGTTCTGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR TCA 90 bp GAAAAATGGGTGAATTCACTGGAGTTGGCCCAGCTAGGGGTTGGGTCTCAGGTGATAAACTCGGGGGCGTaGTCCTCTTCCTTCTCTGGT +
Preference number: 4 (lower is better)
Translates to: EKWVNSLELAQLGVGSQVINSGA*SSSFSG
Trigger: ACCAGAGAAGGAAGAGGATCACGCCCCCGAGTTTAT...CACCTGAGACCCAACCCCTAGCTGGGCCAACTCCAGTGAATTCACCCATTTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR TCA 90 bp CTACAGAAGCAGGTGGGAACATCACAGACGTCCCAGGGCCTGGGGCCCAGGGCTATCTCCCAGATCTATTaGGTTAGAAGCTGTATTAAC +
Preference number: 4 (lower is better)
Translates to: LQKQVGTSQTSQGLGPRAISQIY*VRSCIN
Trigger: GTTAATACAGCTTCTAACTCAATAGATCTGGGAGAT...AGCCCTGGGCCCCAGGCCCTGGGACGTCTGTGATGTTCCCACCTGCTTCTGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR TCA 90 bp TTCCTGGTGGGAAGGCCTGGGCAGAACAGAAGGCTTGTCAAGTCAGAGGGCCACAAGAAGAAAAATGGGTaGATTCACTGGAGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: FLVGRPGQNRRLVKSEGHKKKNG*IHWSWP
Trigger: GGGCCAACTCCAGTGAATTCACCCATTTTTCTTCTT...GTGGCCCTCTGACTTGACAAGCCTTCTGTTCTGCCCAGGCCTTCCCACCAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR TCA 90 bp CCAGCAGCCTCCGCCTTACCTGGGAGCTTGTTAGAAATGCAGGATCTCCCAGATGAGCCTCTTGGAGCTTaGCTTATACACACGCACACA +
Preference number: 4 (lower is better)
Translates to: PAASALPGSLLEMQDLPDEPLGA*LIHTHT
Trigger: TGTGTGCGTGTGTATAAGTCAAGCTCCAAGAGGCTC...ATCTGGGAGATCCTGCATTTCTAACAAGCTCCCAGGTAAGGCGGAGGCTGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR TCA 90 bp GTCCACAGGAGGTGGGGGCCAGCGATGGCTTCAGGGGTGATATTTCCAATATATTGGGGCTTCATGGAATaGCTTGTTGCCTCCATGGAG +
Preference number: 4 (lower is better)
Translates to: VHRRWGPAMASGVIFPIYWGFME*LVASME
Trigger: CTCCATGGAGGCAACAAGTCATTCCATGAAGCCCCA...ATATATTGGAAATATCACCCCTGAAGCCATCGCTGGCCCCCACCTCCTGTGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR TCA 90 bp TTTGTGAGGCACCGCTGCAGACTTCTGAGTGCAGGAATGCGGCAGCCCTGGGTAAGGAGACTGGAACAGTaGAAATCTGGATTTACAGCC +
Preference number: 4 (lower is better)
Translates to: FVRHRCRLLSAGMRQPWVRRLEQ*KSGFTA
Trigger: GGCTGTAAATCCAGATTTTCACTGTTCCAGTCTCCT...TACCCAGGGCTGCCGCATTCCTGCACTCAGAAGTCTGCAGCGGTGCCTCACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR TCA 90 bp CCCTCAGTGGCTTTGAAGGCAGGTGTCCTTGAAGCTAAGCTCTGCTGGCTGCAGTTCATTGGCCACACCTaGTCACATAGCCATCCTAAG +
Preference number: 4 (lower is better)
Translates to: PSVALKAGVLEAKLCWLQFIGHT*SHSHPK
Trigger: CTTAGGATGGCTATGTGATCAGGTGTGGCCAATGAA...CTGCAGCCAGCAGAGCTTAGCTTCAAGGACACCTGCCTTCAAAGCCACTGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR TCA 90 bp GTCTTTGTTAGTCCCCGCCCACCTGGCCGGGATGCCAGCAACAAGGCCATCTGCCTGGTATTGGCTTGGTaGAATAATGATAGGGTCAAT +
Preference number: 4 (lower is better)
Translates to: VFVSPRPPGRDASNKAICLVLAW*NNDRVN
Trigger: ATTGACCCTATCATTATTTCACCAAGCCAATACCAG...GCAGATGGCCTTGTTGCTGGCATCCCGGCCAGGTGGGCGGGGACTAACAAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR TCA 90 bp CACAGGAGGTGGGGGCCAGCGATGGCTTCAGGGGTGATATTTCCAATATATATCGGGAACGGAGGCTGCTaGAATGTGCCAACAAGTGAG +
Preference number: 4 (lower is better)
Translates to: HRRWGPAMASGVIFPIYIGNGGC*NVPTSE
Trigger: CTCACTTGTTGGCACATTTCAGCAGCCTCCGTTCCC...GATATATATTGGAAATATCACCCCTGAAGCCATCGCTGGCCCCCACCTCCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394481.5
CDS-3UTR TCA 90 bp AACCACAGGTGGGGGAGTTCTCTGAGACCTAGGAGCTGGGGTGTACGGAGAAGCTTAATAATAGACCTTTaGAGATGCTTGGGGTCCGGG +
Preference number: 4 (lower is better)
Translates to: NHRWGSSLRPRSWGVRRSLIIDL*RCLGSG
Trigger: CCCGGACCCCAAGCATCTTCAAAGGTCTATTATTAA...GCTTCTCCGTACACCCCAGCTCCTAGGTCTCAGAGAACTCCCCCACCTGTGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000474531.5
ENST00000649301.1
CDS-3UTR TCA 90 bp GCTTTGAAGGCAGGTGTCCTTGAAGCTAAGCTCTGCTGGCTGCAGGTAAAACCACTCAGGAAGGGAAACTaGGGCAGCTGGGAAATGAGG +
Preference number: 4 (lower is better)
Translates to: ALKAGVLEAKLCWLQVKPLRKGN*GSWEMR
Trigger: CCTCATTTCCCAGCTGCCTCAGTTTCCCTTCCTGAG...TGGTTTTACCTGCAGCCAGCAGAGCTTAGCTTCAAGGACACCTGCCTTCAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp GCCTGTGTCTTTTATTGGAAAAGCTTTCCCAGAAGCCCAGGTAGACTTCCTCTTGCTGCAGCTCTGGCTTaGTGTCCACACCAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: ACVFYWKSFPRSPGRLPLAAALA*CPHQGP
Trigger: GGGGCCTTGGTGTGGACAGCAAGCCAGAGCTGCAGC...AAGAGGAAGTCTACCTGGGCTTCTGGGAAAGCTTTTCCAATAAAAGACACAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR GCA 90 bp GCTTTGAAGGCAGGTGTCCTTGAAGCTAAGCTCTGCTGGCTGCAGGTAAAACCACAGAGAAAGCTCCTGTaGTGGGCTCTGAACCCCTTG +
Preference number: 4 (lower is better)
Translates to: ALKAGVLEAKLCWLQVKPQRKLL*WALNPL
Trigger: CAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTG...TGGTTTTACCTGCAGCCAGCAGAGCTTAGCTTCAAGGACACCTGCCTTCAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp CCCTCAGTGGCTTTGAAGGCAGGTGTCCTTGAAGCTAAGCTCTGCTGGCTGCAGCTTGAAGCTAAGCTCTaGTGGCTGCAGGTAAAACCA +
Preference number: 4 (lower is better)
Translates to: PSVALKAGVLEAKLCWLQLEAKL*WLQVKP
Trigger: TGGTTTTACCTGCAGCCAGCAGAGCTTAGCTTCAAG...CTGCAGCCAGCAGAGCTTAGCTTCAAGGACACCTGCCTTCAAAGCCACTGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp CAGCTAGGGGTTGGGTCTCAGGTGACAGAGGCCGGGGATTCAGACTCAAAGGGGATGCTATTCCAGCACTaGTCTGTCACCTTAGATGAT +
Preference number: 4 (lower is better)
Translates to: QLGVGSQVTEAGDSDSKGMLFQH*SVTLDD
Trigger: ATCATCTAAGGTGACAGAGCAGTGCTGGAATAGCAT...CCCCTTTGAGTCTGAATCCCCGGCCTCTGTCACCTGAGACCCAACCCCTAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR GCA 90 bp CCAGCAGCCTCCGCCTTACCTGGGAGCTTGTTAGAAATGCAGGATCTCCCAGATCGACAGTCCCACGTTTaGTTCCAGGAATCAAAGAGC +
Preference number: 4 (lower is better)
Translates to: PAASALPGSLLEMQDLPDRQSHV*FQESKS
Trigger: GCTCTTTGATTCCTGGAAGCAAACGTGGGACTGTCG...ATCTGGGAGATCCTGCATTTCTAACAAGCTCCCAGGTAAGGCGGAGGCTGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR GCA 90 bp TCGGAGATTCCTGGTGGGAAGGCCTGGGCAGAACAGAAGGCTTGTCAAGTCAGACACAGGCGCAATATCTaGATTTACAGCCCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: SEIPGGKAWAEQKACQVRHRRNI*IYSPVL
Trigger: CAGCACAGGGCTGTAAATGCAGATATTGCGCCTGTG...TCTGACTTGACAAGCCTTCTGTTCTGCCCAGGCCTTCCCACCAGGAATCTCCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TCAAAGAGCATGCCAGTGGCAGCTATCTGTGGCAGTTTTGGGAAAGTGAAAGGATCAGGAGCGTGTTGCTaGGTTCCTCACTCCACCGGG +
Preference number: 4 (lower is better)
Translates to: SKSMPVAAICGSFGKVKGSGACC*VPHSTG
Trigger: CCCGGTGGAGTGAGGAACCCAGCAACACGCTCCTGA...TCCTTTCACTTTCCCAAAACTGCCACAGATAGCTGCCACTGGCATGCTCTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp GCTTTGAAGGCAGGTGTCCTTGAAGCTAAGCTCTGCTGGCTGCAGGTAAAACCAGGTGGTTTTTCCAGCTaGTTCAGCCTCTGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: ALKAGVLEAKLCWLQVKPGGFSS*FSLCCR
Trigger: ACGGCAGCAGAGGCTGAACCAGCTGGAAAAACCACC...TGGTTTTACCTGCAGCCAGCAGAGCTTAGCTTCAAGGACACCTGCCTTCAAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp GTGGGAAGGCCTGGGCAGAACAGAAGGCTTGTCAAGTCAGAGGGCCACCTCTTCATCCTCTTCCTTCTCTaGTGGTTTTTCCAGCTGGTT +
Preference number: 4 (lower is better)
Translates to: VGRPGQNRRLVKSEGHLFILFLL*WFFQLV
Trigger: AACCAGCTGGAAAAACCACCAGAGAAGGAAGAGGAT...GAAGAGGTGGCCCTCTGACTTGACAAGCCTTCTGTTCTGCCCAGGCCTTCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CACAGGAGGTGGGGGCCAGCGATGGCTTCAGGGGTGATATTTCCAATATATATCGAGAGCCAGGCCCTCTaGGGTGACACATTTCTACAG +
Preference number: 4 (lower is better)
Translates to: HRRWGPAMASGVIFPIYIESQAL*GDTFLQ
Trigger: CTGTAGAAATGTGTCACCCCAGAGGGCCTGGCTCTC...GATATATATTGGAAATATCACCCCTGAAGCCATCGCTGGCCCCCACCTCCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CAGGAATCAAAGAGCATGCCAGTGGCAGCTATCTGTGGCAGTTTTGGGAAAGTGCCTGGTGGGAAGGCCTaGGCAGAACAGAAGGCTTGT +
Preference number: 4 (lower is better)
Translates to: QESKSMPVAAICGSFGKVPGGKA*AEQKAC
Trigger: ACAAGCCTTCTGTTCTGCCCAGGCCTTCCCACCAGG...CACTTTCCCAAAACTGCCACAGATAGCTGCCACTGGCATGCTCTTTGATTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp GAAAAATGGGTGAATTCACTGGAGTTGGCCCAGCTAGGGGTTGGGTCTCAGGTGAATATATATCAGCCCTaGGCACTCTCGCCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: EKWVNSLELAQLGVGSQVNIYQP*ALSPCC
Trigger: GCAGCAGGGCGAGAGTGCCCAGGGCTGATATATATT...CACCTGAGACCCAACCCCTAGCTGGGCCAACTCCAGTGAATTCACCCATTTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CAATTTGCTAGGCCAAAGTCTTCACGGGCAATCCCTGGGGTGGGAGTCTGGGATGAGTCTGGGATGGGGTaGATAATGAAGGATACCTGG +
Preference number: 4 (lower is better)
Translates to: QFARPKSSRAIPGVGVWDESGMG*IMKDTW
Trigger: CCAGGTATCCTTCATTATCCACCCCATCCCAGACTC...ATCCCAGACTCCCACCCCAGGGATTGCCCGTGAAGACTTTGGCCTAGCAAATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp GCCTGTGTCTTTTATTGGAAAAGCTTTCCCAGAAGCCCAGGTAGACTTCCTCTTGGCCCAGCTAGGGGTTaGGTCTCAGGTGACAGAGGC +
Preference number: 4 (lower is better)
Translates to: ACVFYWKSFPRSPGRLPLGPARG*VSGDRG
Trigger: GCCTCTGTCACCTGAGACCCAACCCCTAGCTGGGCC...AAGAGGAAGTCTACCTGGGCTTCTGGGAAAGCTTTTCCAATAAAAGACACAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp AACCACAGGTGGGGGAGTTCTCTGAGACCTAGGAGCTGGGGTGTACGGAGAAGCAGTGGCAGCTATCTGTaGCAGTTTTGGGAAAGTGAA +
Preference number: 4 (lower is better)
Translates to: NHRWGSSLRPRSWGVRRSSGSYL*QFWESE
Trigger: TTCACTTTCCCAAAACTGCCACAGATAGCTGCCACT...GCTTCTCCGTACACCCCAGCTCCTAGGTCTCAGAGAACTCCCCCACCTGTGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp AACCACAGGTGGGGGAGTTCTCTGAGACCTAGGAGCTGGGGTGTACGGAGAAGCCATTCAGGAGCCTCTTaGAGCTTGACTTATACACAC +
Preference number: 4 (lower is better)
Translates to: NHRWGSSLRPRSWGVRRSHSGAS*SLTYTH
Trigger: GTGTGTATAAGTCAAGCTCCAAGAGGCTCCTGAATG...GCTTCTCCGTACACCCCAGCTCCTAGGTCTCAGAGAACTCCCCCACCTGTGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp GCTCACAGCATGGTCCTCACACCAGCAGCCTCCGCCTTACCTGGGAGCTTGTTAAGTGTAACCCTCACCTaGCAGACATTAAACAGCGTA +
Preference number: 4 (lower is better)
Translates to: AHSMVLTPAASALPGSLLSVTLT*QTLNSV
Trigger: TACGCTGTTTAATGTCTGCCAGGTGAGGGTTACACT...TAACAAGCTCCCAGGTAAGGCGGAGGCTGCTGGTGTGAGGACCATGCTGTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CCAGTTATGAGTAAGACCAGAACAATCCCTTTCCTCCGACAGTCCCACGTTTGCACCTCTGGGGACCACTaGGTGAATCCCCAGGCATTC +
Preference number: 4 (lower is better)
Translates to: PVMSKTRTIPFLRQSHVCTSGDH*VNPQAF
Trigger: GAATGCCTGGGGATTCACCCAGTGGTCCCCAGAGGT...GCAAACGTGGGACTGTCGGAGGAAAGGGATTGTTCTGGTCTTACTCATAACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CCAGCAGCCTCCGCCTTACCTGGGAGCTTGTTAGAAATGCAGGATCTCCCAGATTACAGCCTCCACAGTTaGAGTGGCTGGAGATACAGA +
Preference number: 4 (lower is better)
Translates to: PAASALPGSLLEMQDLPDYSLHS*SGWRYR
Trigger: TCTGTATCTCCAGCCACTCCAACTGTGGAGGCTGTA...ATCTGGGAGATCCTGCATTTCTAACAAGCTCCCAGGTAAGGCGGAGGCTGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CCAGTTATGAGTAAGACCAGAACAATCCCTTTCCTCCGACAGTCCCACGTTTGCTCCAGCACTTCCCCATaGGAGGGGAAGCCAAGCTTC +
Preference number: 4 (lower is better)
Translates to: PVMSKTRTIPFLRQSHVCSSTSP*EGKPSF
Trigger: GAAGCTTGGCTTCCCCTCCCATGGGGAAGTGCTGGA...GCAAACGTGGGACTGTCGGAGGAAAGGGATTGTTCTGGTCTTACTCATAACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394481.5
CDS-3UTR CCA 90 bp CAACACTCACATAACCAACACAATTTGCTAGGCCAAAGTCTTCACGGGCAATCCATGCGTGGTCCCTGCTaGGTGCCCATCACCCACCTG +
Preference number: 4 (lower is better)
Translates to: QHSHNQHNLLGQSLHGQSMRGPC*VPITHL
Trigger: CAGGTGGGTGATGGGCACCCAGCAGGGACCACGCAT...GGATTGCCCGTGAAGACTTTGGCCTAGCAAATTGTGTTGGTTATGTGAGTGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464064.5
3UTR CAA 72 bp GTCCTCACACCAGCAGCCTCCGCCTTACCTGGGAGCTaGTTAGAAATGCAGGATCTCCCAGATCTATTGAGT +
Preference number: 4 (lower is better)
Translates to: VLTPAASALPGS*LEMQDLPDLLS
Trigger: ACTCAATAGATCTGGGAGATCCTGCATTTCTAACAAGCTCCCAGGTAAGGCGGAGGCTGCTGGTGTGAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
3UTR CAA 72 bp TCAGCACGCCAGTCACATTCAGGAGCCTCTTGGAGCTaGACTTATACACACGCACACAGGCGCAATATCTGC +
Preference number: 4 (lower is better)
Translates to: SARQSHSGASWS*TYTHAHRRNIC
Trigger: GCAGATATTGCGCCTGTGTGCGTGTGTATAAGTCAAGCTCCAAGAGGCTCCTGAATGTGACTGGCGTGCTGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR TCA 90 bp GCCTGTGTCTTTTATTGGAAAAGCTTTCCCAGAAGCCCAGGTAGACTTCCTCTTCCCTTCTGTGGTTCATaGGCAGCTCCCGGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: ACVFYWKSFPRSPGRLPLPFCGS*AAPGGA
Trigger: AGCTCCACCGGGAGCTGCTCATGAACCACAGAAGGG...AAGAGGAAGTCTACCTGGGCTTCTGGGAAAGCTTTTCCAATAAAAGACACAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR TCA 90 bp GCTCACAAGACAGTTATAAGAATGAAATCAGAATCAGCATGCAGTACACTGGGCTCCTGTGCTGGGCTCTaGACCCCTTGCAGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: AHKTVIRMKSESACSTLGSCAGL*TPCREG
Trigger: CCCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGA...GCCCAGTGTACTGCATGCTGATTCTGATTTCATTCTTATAACTGTCTTGTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464064.5
CDS-3UTR TCA 90 bp ATGAGTAAGACCAGAACAATCCCTTTCCTCCGACAGTCCCACGTTTGCTTCCAGTCCCCTCAGTGGCTTTaGAGGCAGGTGTCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: MSKTRTIPFLRQSHVCFQSPQWL*RQVSLK
Trigger: CTTCAAGGACACCTGCCTTCAAAGCCACTGAGGGGA...CTGGAAGCAAACGTGGGACTGTCGGAGGAAAGGGATTGTTCTGGTCTTACTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR TCA 90 bp GGCCAGTCCATAAAGGTGGCAGTGGGGTCTTCAAACCACTGTTTCTATTCCAGAACGACCCCTGAAAAGTaGACCAAGGTCGTCTGCACG +
Preference number: 4 (lower is better)
Translates to: GQSIKVAVGSSNHCFYSRTTPEK*TKVVCT
Trigger: CGTGCAGACGACCTTGGTTCACTTTTCAGGGGTCGT...TCTGGAATAGAAACAGTGGTTTGAAGACCCCACTGCCACCTTTATGGACTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR TCA 90 bp ATGAGTAAGACCAGAACAATCCCTTTCCTCCGACAGTCCCACGTTTGCTTCCAGACGACCCCTGAAAAGTaGACCAAGGTCGTCTGCACG +
Preference number: 4 (lower is better)
Translates to: MSKTRTIPFLRQSHVCFQTTPEK*TKVVCT
Trigger: CGTGCAGACGACCTTGGTTCACTTTTCAGGGGTCGT...CTGGAAGCAAACGTGGGACTGTCGGAGGAAAGGGATTGTTCTGGTCTTACTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR TCA 90 bp GCAGCCTCCGCCTTACCTGGGAGCTTGTTAGAAATGCAGGATCTCCCAGATCTACAGTGCTCTGTCTGCTaGTCCTCTTCCCTCTTACTA +
Preference number: 4 (lower is better)
Translates to: AASALPGSLLEMQDLPDLQCSVC*SSSLLL
Trigger: TAGTAAGAGGGAAGAGGATCAGCAGACAGAGCACTG...TAGATCTGGGAGATCCTGCATTTCTAACAAGCTCCCAGGTAAGGCGGAGGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464064.5
CDS-3UTR TCA 90 bp ACAAGATCCCCAGTGATTTTTATGCACAATCAAGTTTGTGAGGCACCGCTGCAGGAGGCAGCTGGGAAATaGGGGAAGACGTGGGGCAGT +
Preference number: 4 (lower is better)
Translates to: TRSPVIFMHNQVCEAPLQEAAGK*GKTWGS
Trigger: ACTGCCCCACGTCTTCCCTCATTTCCCAGCTGCCTC...CTGCAGCGGTGCCTCACAAACTTGATTGTGCATAAAAATCACTGGGGATCTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000474531.5
ENST00000649301.1
CDS-3UTR TCA 90 bp CTAGAATTGCATCGTAACAGTGTGGTCACACTGGTAAGAAATGCAGATTGGCAACCTCCCTGCTGGCGTTaGTCTCAGGAGCCAGGACCC +
Preference number: 4 (lower is better)
Translates to: LELHRNSVVTLVRNADWQPPCWR*SQEPGP
Trigger: GGGTCCTGGCTCCTGAGATCAACGCCAGCAGGGAGG...TTGCCAATCTGCATTTCTTACCAGTGTGACCACACTGTTACGATGCAATTCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp TTTATGCACAATCAAGTTTGTGAGGCACCGCTGCAGACTTCTGAGTGCAGGAATCGTCTCAGCAGCTCCTaGTCAAAGGGGCACTGCAGC +
Preference number: 4 (lower is better)
Translates to: FMHNQVCEAPLQTSECRNRLSSS*SKGHCS
Trigger: GCTGCAGTGCCCCTTTGAGCAGGAGCTGCTGAGACG...ATTCCTGCACTCAGAAGTCTGCAGCGGTGCCTCACAAACTTGATTGTGCATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp ATGAGTAAGACCAGAACAATCCCTTTCCTCCGACAGTCCCACGTTTGCTTCCAGAGCAGGAGGGCTGGGTaGTTGGAAGGAAAACCTAGG +
Preference number: 4 (lower is better)
Translates to: MSKTRTIPFLRQSHVCFQSRRAG*LEGKPR
Trigger: CCTAGGTTTTCCTTCCAAGCACCCAGCCCTCCTGCT...CTGGAAGCAAACGTGGGACTGTCGGAGGAAAGGGATTGTTCTGGTCTTACTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR GCA 90 bp ACAAGATCCCCAGTGATTTTTATGCACAATCAAGTTTGTGAGGCACCGCTGCAGTGGGCACTCTCGCCCTaGTGCTCACAGCATGGTCCT +
Preference number: 4 (lower is better)
Translates to: TRSPVIFMHNQVCEAPLQWALSP*CSQHGP
Trigger: AGGACCATGCTGTGAGCAGCAGGGCGAGAGTGCCCA...CTGCAGCGGTGCCTCACAAACTTGATTGTGCATAAAAATCACTGGGGATCTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp GCTTTGAAGGCAGGTGTCCTTGAAGCTAAGCTCTGCTGGCTGCAGGTAAAACCAAAGGATACCTGGGGTTaGAGAAGTGGGGTGGGAATC +
Preference number: 4 (lower is better)
Translates to: ALKAGVLEAKLCWLQVKPKDTWG*RSGVGI
Trigger: GATTCCCACCCCACTTCTGCAACCCCAGGTATCCTT...TGGTTTTACCTGCAGCCAGCAGAGCTTAGCTTCAAGGACACCTGCCTTCAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp TCAATTCTGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGGAAAGTGAAAGGAGATaGTATTCCAGCACTGCTCTG +
Preference number: 4 (lower is better)
Translates to: SILPEKAPVLGSEPLAGRESERR*YSSTAL
Trigger: CAGAGCAGTGCTGGAATAGCATCTCCTTTCACTTTC...CCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR GCA 90 bp GTCCACAGGAGGTGGGGGCCAGCGATGGCTTCAGGGGTGATATTTCCAATATATCGACAGTCCCACGTTTaGTTCCAGGAATCAAAGAGC +
Preference number: 4 (lower is better)
Translates to: VHRRWGPAMASGVIFPIYRQSHV*FQESKS
Trigger: GCTCTTTGATTCCTGGAAGCAAACGTGGGACTGTCG...ATATATTGGAAATATCACCCCTGAAGCCATCGCTGGCCCCCACCTCCTGTGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR GCA 90 bp AAATGGGTGAATTCACTGGAGTTGGCCCAGCTAGGGGTTGGGTCTCAGGTGACACATGGAATGACTTGTTaGCTCCATGGAGCACCTCTG +
Preference number: 4 (lower is better)
Translates to: KWVNSLELAQLGVGSQVTHGMTC*LHGAPL
Trigger: CAGAGGTGCTCCATGGAGGCAACAAGTCATTCCATG...TGTCACCTGAGACCCAACCCCTAGCTGGGCCAACTCCAGTGAATTCACCCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR GCA 90 bp CCCTCAGTGGCTTTGAAGGCAGGTGTCCTTGAAGCTAAGCTCTGCTGGCTGCAGATAGCCATCCTAAGCTaGAAAGGAGACTGGAACAGT +
Preference number: 4 (lower is better)
Translates to: PSVALKAGVLEAKLCWLQIAILS*KGDWNS
Trigger: ACTGTTCCAGTCTCCTTTGCAGCTTAGGATGGCTAT...CTGCAGCCAGCAGAGCTTAGCTTCAAGGACACCTGCCTTCAAAGCCACTGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR GCA 90 bp CAACACTCACATAACCAACACAATTTGCTAGGCCAAAGTCTTCACGGGCAATCCGAGCTCTGGGAGGGCTaGGTGCGGATGTCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: QHSHNQHNLLGQSLHGQSELWEG*VRMSAS
Trigger: TGAAGCTGACATCCGCACGCAGCCCTCCCAGAGCTC...GGATTGCCCGTGAAGACTTTGGCCTAGCAAATTGTGTTGGTTATGTGAGTGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp CACAGCATGGTCCTCACACCAGCAGCCTCCGCCTTACCTGGGAGCTTGTTAGAATCTCTAAAATGGGAATaGCACCTGGCTCACAAGACA +
Preference number: 4 (lower is better)
Translates to: HSMVLTPAASALPGSLLESLKWE*HLAHKT
Trigger: TGTCTTGTGAGCCAGGTGGCATTCCCATTTTAGAGA...TTCTAACAAGCTCCCAGGTAAGGCGGAGGCTGCTGGTGTGAGGACCATGCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464064.5
CDS-3UTR CCA 90 bp ACAAGATCCCCAGTGATTTTTATGCACAATCAAGTTTGTGAGGCACCGCTGCAGTCAGGAGCGTGTTGCTaGGTTCCTCACTCCACCGGG +
Preference number: 4 (lower is better)
Translates to: TRSPVIFMHNQVCEAPLQSGACC*VPHSTG
Trigger: CCCGGTGGAGTGAGGAACCCAGCAACACGCTCCTGA...CTGCAGCGGTGCCTCACAAACTTGATTGTGCATAAAAATCACTGGGGATCTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000649301.1
CDS-3UTR CCA 90 bp GCCTGTGTCTTTTATTGGAAAAGCTTTCCCAGAAGCCCAGGTAGACTTCCTCTTCCAAGGCCCCTTCTGTaGTTCATGAGCAGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: ACVFYWKSFPRSPGRLPLPRPLL*FMSSSR
Trigger: CCGGGAGCTGCTCATGAACCACAGAAGGGGCCTTGG...AAGAGGAAGTCTACCTGGGCTTCTGGGAAAGCTTTTCCAATAAAAGACACAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp GGCCAGTCCATAAAGGTGGCAGTGGGGTCTTCAAACCACTGTTTCTATTCCAGATTCTTCTTGATGAGCTaGTTCCGCCGGCGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: GQSIKVAVGSSNHCFYSRFFLMS*FRRRCS
Trigger: AGAGCACCGCCGGCGGAACCAGCTCATCAAGAAGAA...TCTGGAATAGAAACAGTGGTTTGAAGACCCCACTGCCACCTTTATGGACTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CGCCTTACCTGGGAGCTTGTTAGAAATGCAGGATCTCCCAGATCTATTGAGTTAGGCACTGCAGCCGCTTaGCTTCCAGCTCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: RLTWELVRNAGSPRSIELGTAAA*LPAPPS
Trigger: AGAAGGAGGAGCTGGAAGCCAAGCGGCTGCAGTGCC...TAACTCAATAGATCTGGGAGATCCTGCATTTCTAACAAGCTCCCAGGTAAGGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CAATTTGCTAGGCCAAAGTCTTCACGGGCAATCCCTGGGGTGGGAGTCTGGGATCTCTTCCTTCTCTGGTaGTTTTTCCAGCTGGTTCAG +
Preference number: 4 (lower is better)
Translates to: QFARPKSSRAIPGVGVWDLFLLW*FFQLVQ
Trigger: CTGAACCAGCTGGAAAAACCACCAGAGAAGGAAGAG...ATCCCAGACTCCCACCCCAGGGATTGCCCGTGAAGACTTTGGCCTAGCAAATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CCAGCAGCCTCCGCCTTACCTGGGAGCTTGTTAGAAATGCAGGATCTCCCAGATCTCTTCCTTCTCTGGTaGTTTTTCCAGCTGGTTCAG +
Preference number: 4 (lower is better)
Translates to: PAASALPGSLLEMQDLPDLFLLW*FFQLVQ
Trigger: CTGAACCAGCTGGAAAAACCACCAGAGAAGGAAGAG...ATCTGGGAGATCCTGCATTTCTAACAAGCTCCCAGGTAAGGCGGAGGCTGCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TCAATTCTGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGATCCTCTTCCTTCTCTaGTGGTTTTTCCAGCTGGTT +
Preference number: 4 (lower is better)
Translates to: SILPEKAPVLGSEPLAGRILFLL*WFFQLV
Trigger: AACCAGCTGGAAAAACCACCAGAGAAGGAAGAGGAT...CCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CCCTCAGTGGCTTTGAAGGCAGGTGTCCTTGAAGCTAAGCTCTGCTGGCTGCAGATCCTCTTCCTTCTCTaGTGGTTTTTCCAGCTGGTT +
Preference number: 4 (lower is better)
Translates to: PSVALKAGVLEAKLCWLQILFLL*WFFQLV
Trigger: AACCAGCTGGAAAAACCACCAGAGAAGGAAGAGGAT...CTGCAGCCAGCAGAGCTTAGCTTCAAGGACACCTGCCTTCAAAGCCACTGAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TCACATAACCAACACAATTTGCTAGGCCAAAGTCTTCACGGGCAATCCCTGGGGTTGGAGCAGGAGGGCTaGGTGCTTGGAAGGAAAACC +
Preference number: 4 (lower is better)
Translates to: SHNQHNLLGQSLHGQSLGLEQEG*VLGRKT
Trigger: GGTTTTCCTTCCAAGCACCCAGCCCTCCTGCTCCAA...CCCCAGGGATTGCCCGTGAAGACTTTGGCCTAGCAAATTGTGTTGGTTATGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TCACATAACCAACACAATTTGCTAGGCCAAAGTCTTCACGGGCAATCCCTGGGGAGAAAGCTCCTGTGCTaGGCTCTGAACCCCTTGCAG +
Preference number: 4 (lower is better)
Translates to: SHNQHNLLGQSLHGQSLGRKLLC*ALNPLQ
Trigger: CTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCT...CCCCAGGGATTGCCCGTGAAGACTTTGGCCTAGCAAATTGTGTTGGTTATGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CAACACTCACATAACCAACACAATTTGCTAGGCCAAAGTCTTCACGGGCAATCCAGCCTCGGAGATTCCTaGTGGGAAGGCCTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: QHSHNQHNLLGQSLHGQSSLGDS*WEGLGR
Trigger: TCTGCCCAGGCCTTCCCACCAGGAATCTCCGAGGCT...GGATTGCCCGTGAAGACTTTGGCCTAGCAAATTGTGTTGGTTATGTGAGTGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CCAGCAGCCTCCGCCTTACCTGGGAGCTTGTTAGAAATGCAGGATCTCCCAGATATAATGAAGGATACCTaGGGTTGCAGAAGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: PAASALPGSLLEMQDLPDIMKDT*GCRSGV
Trigger: CACCCCACTTCTGCAACCCCAGGTATCCTTCATTAT...ATCTGGGAGATCCTGCATTTCTAACAAGCTCCCAGGTAAGGCGGAGGCTGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp GCAGCCTCCGCCTTACCTGGGAGCTTGTTAGAAATGCAGGATCTCCCAGATCTAGAGTCTGGGATGGGGTaGATAATGAAGGATACCTGG +
Preference number: 4 (lower is better)
Translates to: AASALPGSLLEMQDLPDLESGMG*IMKDTW
Trigger: CCAGGTATCCTTCATTATCCACCCCATCCCAGACTC...TAGATCTGGGAGATCCTGCATTTCTAACAAGCTCCCAGGTAAGGCGGAGGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp ATTTACAGCCTCCACAGTTGGAGTGGCTGGAGATACAGAGTTGGGACGACCCCTCAAAGAGCATGCCAGTaGCAGCTATCTGTGGCAGTT +
Preference number: 4 (lower is better)
Translates to: IYSLHSWSGWRYRVGTTPQRACQ*QLSVAV
Trigger: AACTGCCACAGATAGCTGCCACTGGCATGCTCTTTG...AGGGGTCGTCCCAACTCTGTATCTCCAGCCACTCCAACTGTGGAGGCTGTAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp GAAAAATGGGTGAATTCACTGGAGTTGGCCCAGCTAGGGGTTGGGTCTCAGGTGTTTACAGCCCTGTGCTaGCAGCACACACAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: EKWVNSLELAQLGVGSQVFTALC*QHTQEK
Trigger: CTTTTCCTGTGTGTGCTGCCAGCACAGGGCTGTAAA...CACCTGAGACCCAACCCCTAGCTGGGCCAACTCCAGTGAATTCACCCATTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CACAGGAGGTGGGGGCCAGCGATGGCTTCAGGGGTGATATTTCCAATATATATCCACAGTTGGAGTGGCTaGAGATACAGAGTTGGGACG +
Preference number: 4 (lower is better)
Translates to: HRRWGPAMASGVIFPIYIHSWSG*RYRVGT
Trigger: CGTCCCAACTCTGTATCTCCAGCCACTCCAACTGTG...GATATATATTGGAAATATCACCCCTGAAGCCATCGCTGGCCCCCACCTCCTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp AACCACAGGTGGGGGAGTTCTCTGAGACCTAGGAGCTGGGGTGTACGGAGAAGCAGCTGCAAAGGAGACTaGAACAGTGAAAATCTGGAT +
Preference number: 4 (lower is better)
Translates to: NHRWGSSLRPRSWGVRRSSCKGD*NSENLD
Trigger: ATCCAGATTTTCACTGTTCCAGTCTCCTTTGCAGCT...GCTTCTCCGTACACCCCAGCTCCTAGGTCTCAGAGAACTCCCCCACCTGTGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TCTGCCCTGCCCTTCCTCCCCTCAGTGGCTTTGAAGGCAGGTGTCCTTGAAGCTTATTTACAAGAATTCTaGAGAAGGATGGCGGCTGGT +
Preference number: 4 (lower is better)
Translates to: SALPFLPSVALKAGVLEAYLQEF*RRMAAG
Trigger: ACCAGCCGCCATCCTTCTCCAGAATTCTTGTAAATA...AGCTTCAAGGACACCTGCCTTCAAAGCCACTGAGGGGAGGAAGGGCAGGGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TCCTCCTCAATTCTGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGATCTCCGAGTACATaGCGGCCTTATTGTCTAACT +
Preference number: 4 (lower is better)
Translates to: SSSILPEKAPVLGSEPLAGSPST*RPYCLT
Trigger: AGTTAGACAATAAGGCCGCCATGTACTCGGAGATCC...TGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTGAGGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CTAGAATTGCATCGTAACAGTGTGGTCACACTGGTAAGAAATGCAGATTGGCAACCTGGAGGACAGCCCTaGAGGATGCGTGGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: LELHRNSVVTLVRNADWQPGGQP*RMRGPC
Trigger: GCAGGGACCACGCATCCTCCAGGGCTGTCCTCCAGG...TTGCCAATCTGCATTTCTTACCAGTGTGACCACACTGTTACGATGCAATTCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464064.5
CDS-3UTR TCA 90 bp ACAAGATCCCCAGTGATTTTTATGCACAATCAAGTTTGTGAGGCACCGCTGCAGGAGCCCTCGTCCATCTaGGACCCTCTGTCTTGCTTC +
Preference number: 4 (lower is better)
Translates to: TRSPVIFMHNQVCEAPLQEPSSI*DPLSCF
Trigger: GAAGCAAGACAGAGGGTCTCAGATGGACGAGGGCTC...CTGCAGCGGTGCCTCACAAACTTGATTGTGCATAAAAATCACTGGGGATCTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR TCA 90 bp GTGATCTTTATTTTAGGGATTGTGCATCTTCAGTGTAACCCTCACCTGGCAGACCTGGGGACCACTGGGTaGATCCCCAGGCATTCCCTT +
Preference number: 4 (lower is better)
Translates to: VIFILGIVHLQCNPHLADLGTTG*IPRHSL
Trigger: AAGGGAATGCCTGGGGATTCACCCAGTGGTCCCCAG...GTCTGCCAGGTGAGGGTTACACTGAAGATGCACAATCCCTAAAATAAAGATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR TCA 90 bp TCCTCCTCAATTCTGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAAGGAGACTGGAACAGTaGAAATCTGGATTTACAGCC +
Preference number: 4 (lower is better)
Translates to: SSSILPEKAPVLGSEPLARRLEQ*KSGFTA
Trigger: GGCTGTAAATCCAGATTTTCACTGTTCCAGTCTCCT...TGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTGAGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR GCA 90 bp CGCCTTACCTGGGAGCTTGTTAGAAATGCAGGATCTCCCAGATCTATTGAGTTATGCTCTAGGACACGCTaGAGCTCTGGCTTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: RLTWELVRNAGSPRSIELCSRTR*SSGLLS
Trigger: GGACAGCAAGCCAGAGCTGCAGCGTGTCCTAGAGCA...TAACTCAATAGATCTGGGAGATCCTGCATTTCTAACAAGCTCCCAGGTAAGGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp CGCCTTACCTGGGAGCTTGTTAGAAATGCAGGATCTCCCAGATCTATTGAGTTACCTTGCAGGGAGGGGTaGAGGTTATCCCTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: RLTWELVRNAGSPRSIELPCREG*RLSLLE
Trigger: CTCCAAGAGGGATAACCTGCACCCCTCCCTGCAAGG...TAACTCAATAGATCTGGGAGATCCTGCATTTCTAACAAGCTCCCAGGTAAGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp CAACACTCACATAACCAACACAATTTGCTAGGCCAAAGTCTTCACGGGCAATCCCCTTGCAGGGAGGGGTaGAGGTTATCCCTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: QHSHNQHNLLGQSLHGQSPCREG*RLSLLE
Trigger: CTCCAAGAGGGATAACCTGCACCCCTCCCTGCAAGG...GGATTGCCCGTGAAGACTTTGGCCTAGCAAATTGTGTTGGTTATGTGAGTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp GTCCACAGGAGGTGGGGGCCAGCGATGGCTTCAGGGGTGATATTTCCAATATATCTTGAAGCTAAGCTCTaGTGGCTGCAGGTAAAACCA +
Preference number: 4 (lower is better)
Translates to: VHRRWGPAMASGVIFPIYLEAKL*WLQVKP
Trigger: TGGTTTTACCTGCAGCCAGCAGAGCTTAGCTTCAAG...ATATATTGGAAATATCACCCCTGAAGCCATCGCTGGCCCCCACCTCCTGTGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp AACCACAGGTGGGGGAGTTCTCTGAGACCTAGGAGCTGGGGTGTACGGAGAAGCCACACTGGTAAGAAATaGAGATTGGCAATCATGTAC +
Preference number: 4 (lower is better)
Translates to: NHRWGSSLRPRSWGVRRSHTGKK*RLAIMY
Trigger: GTACATGATTGCCAATCTGCATTTCTTACCAGTGTG...GCTTCTCCGTACACCCCAGCTCCTAGGTCTCAGAGAACTCCCCCACCTGTGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp CCAGCAGCCTCCGCCTTACCTGGGAGCTTGTTAGAAATGCAGGATCTCCCAGATGAAAGTGAAAGGAGATaGTATTCCAGCACTGCTCTG +
Preference number: 4 (lower is better)
Translates to: PAASALPGSLLEMQDLPDESERR*YSSTAL
Trigger: CAGAGCAGTGCTGGAATAGCATCTCCTTTCACTTTC...ATCTGGGAGATCCTGCATTTCTAACAAGCTCCCAGGTAAGGCGGAGGCTGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR GCA 90 bp TCCTCCTCAATTCTGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGAAAGTGAAAGGAGATaGTATTCCAGCACTGCTCTG +
Preference number: 4 (lower is better)
Translates to: SSSILPEKAPVLGSEPLAESERR*YSSTAL
Trigger: CAGAGCAGTGCTGGAATAGCATCTCCTTTCACTTTC...TGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTGAGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR GCA 90 bp ATTTACAGCCTCCACAGTTGGAGTGGCTGGAGATACAGAGTTGGGACGACCCCTAGGAATCAAAGAGCATaGCAGTGGCAGCTATCTGTG +
Preference number: 4 (lower is better)
Translates to: IYSLHSWSGWRYRVGTTPRNQRA*QWQLSV
Trigger: CACAGATAGCTGCCACTGGCATGCTCTTTGATTCCT...AGGGGTCGTCCCAACTCTGTATCTCCAGCCACTCCAACTGTGGAGGCTGTAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR GCA 90 bp GCCTGTGTCTTTTATTGGAAAAGCTTTCCCAGAAGCCCAGGTAGACTTCCTCTTCATGGACCCGAGGGCTaGTTCTTTGGGGAAGTGGTG +
Preference number: 4 (lower is better)
Translates to: ACVFYWKSFPRSPGRLPLHGPEG*FFGEVV
Trigger: CACCACTTCCCCAAAGAAGCAGCCCTCGGGTCCATG...AAGAGGAAGTCTACCTGGGCTTCTGGGAAAGCTTTTCCAATAAAAGACACAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp ACAAGATCCCCAGTGATTTTTATGCACAATCAAGTTTGTGAGGCACCGCTGCAGGGAATGCGGCAGCCCTaGGTAGGTGTGGTTAGAAGG +
Preference number: 4 (lower is better)
Translates to: TRSPVIFMHNQVCEAPLQGMRQP*VGVVRR
Trigger: CCTTCTAACCACACCTACCCAGGGCTGCCGCATTCC...CTGCAGCGGTGCCTCACAAACTTGATTGTGCATAAAAATCACTGGGGATCTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp GCCTGTGTCTTTTATTGGAAAAGCTTTCCCAGAAGCCCAGGTAGACTTCCTCTTGTTGCAGAAGTGGGGTaGGAATCCCTGGGGCATCAG +
Preference number: 4 (lower is better)
Translates to: ACVFYWKSFPRSPGRLPLVAEVG*ESLGHQ
Trigger: CTGATGCCCCAGGGATTCCCACCCCACTTCTGCAAC...AAGAGGAAGTCTACCTGGGCTTCTGGGAAAGCTTTTCCAATAAAAGACACAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CGCCTTACCTGGGAGCTTGTTAGAAATGCAGGATCTCCCAGATCTATTGAGTTAGTTGCAGAAGTGGGGTaGGAATCCCTGGGGCATCAG +
Preference number: 4 (lower is better)
Translates to: RLTWELVRNAGSPRSIELVAEVG*ESLGHQ
Trigger: CTGATGCCCCAGGGATTCCCACCCCACTTCTGCAAC...TAACTCAATAGATCTGGGAGATCCTGCATTTCTAACAAGCTCCCAGGTAAGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp AAATGGGTGAATTCACTGGAGTTGGCCCAGCTAGGGGTTGGGTCTCAGGTGACAATAATGAAGGATACCTaGGGTTGCAGAAGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: KWVNSLELAQLGVGSQVTIMKDT*GCRSGV
Trigger: CACCCCACTTCTGCAACCCCAGGTATCCTTCATTAT...TGTCACCTGAGACCCAACCCCTAGCTGGGCCAACTCCAGTGAATTCACCCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CACAGGAGGTGGGGGCCAGCGATGGCTTCAGGGGTGATATTTCCAATATATATCGAGTCTGGGATGGGGTaGATAATGAAGGATACCTGG +
Preference number: 4 (lower is better)
Translates to: HRRWGPAMASGVIFPIYIESGMG*IMKDTW
Trigger: CCAGGTATCCTTCATTATCCACCCCATCCCAGACTC...GATATATATTGGAAATATCACCCCTGAAGCCATCGCTGGCCCCCACCTCCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CACAGGAGGTGGGGGCCAGCGATGGCTTCAGGGGTGATATTTCCAATATATATCCAAAGAGCATGCCAGTaGCAGCTATCTGTGGCAGTT +
Preference number: 4 (lower is better)
Translates to: HRRWGPAMASGVIFPIYIQRACQ*QLSVAV
Trigger: AACTGCCACAGATAGCTGCCACTGGCATGCTCTTTG...GATATATATTGGAAATATCACCCCTGAAGCCATCGCTGGCCCCCACCTCCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CACAGGAGGTGGGGGCCAGCGATGGCTTCAGGGGTGATATTTCCAATATATATCTTTACAGCCCTGTGCTaGCAGCACACACAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: HRRWGPAMASGVIFPIYIFTALC*QHTQEK
Trigger: CTTTTCCTGTGTGTGCTGCCAGCACAGGGCTGTAAA...GATATATATTGGAAATATCACCCCTGAAGCCATCGCTGGCCCCCACCTCCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CGCCTTACCTGGGAGCTTGTTAGAAATGCAGGATCTCCCAGATCTATTGAGTTAGACTTGTTGCCTCCATaGAGCACCTCTGGGGACCAC +
Preference number: 4 (lower is better)
Translates to: RLTWELVRNAGSPRSIELDLLPP*STSGDH
Trigger: GTGGTCCCCAGAGGTGCTCCATGGAGGCAACAAGTC...TAACTCAATAGATCTGGGAGATCCTGCATTTCTAACAAGCTCCCAGGTAAGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp ATGAGTAAGACCAGAACAATCCCTTTCCTCCGACAGTCCCACGTTTGCTTCCAGCCTCCACAGTTGGAGTaGCTGGAGATACAGAGTTGG +
Preference number: 4 (lower is better)
Translates to: MSKTRTIPFLRQSHVCFQPPQLE*LEIQSW
Trigger: CCAACTCTGTATCTCCAGCCACTCCAACTGTGGAGG...CTGGAAGCAAACGTGGGACTGTCGGAGGAAAGGGATTGTTCTGGTCTTACTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CACAGCATGGTCCTCACACCAGCAGCCTCCGCCTTACCTGGGAGCTTGTTAGAAGGAACAGTGAAAATCTaGATTTACAGCCTCCACAGT +
Preference number: 4 (lower is better)
Translates to: HSMVLTPAASALPGSLLEGTVKI*IYSLHS
Trigger: ACTGTGGAGGCTGTAAATCCAGATTTTCACTGTTCC...TTCTAACAAGCTCCCAGGTAAGGCGGAGGCTGCTGGTGTGAGGACCATGCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CCCTCAGTGGCTTTGAAGGCAGGTGTCCTTGAAGCTAAGCTCTGCTGGCTGCAGGCCTGTGTCTTTTATTaGAAAAGCTTTCCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: PSVALKAGVLEAKLCWLQACVFY*KSFPRS
Trigger: GCTTCTGGGAAAGCTTTTCCAATAAAAGACACAGGC...CTGCAGCCAGCAGAGCTTAGCTTCAAGGACACCTGCCTTCAAAGCCACTGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CAGGAATCAAAGAGCATGCCAGTGGCAGCTATCTGTGGCAGTTTTGGGAAAGTGAGGGTCAGGCAAGAGTaGATTCCAGCACTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: QESKSMPVAAICGSFGKVRVRQE*IPALPH
Trigger: ATGGGGAAGTGCTGGAATCCACTCTTGCCTGACCCT...CACTTTCCCAAAACTGCCACAGATAGCTGCCACTGGCATGCTCTTTGATTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394481.5
3UTR CAA 72 bp CCTTCTGAAGAAGAAAAATGGGTGAATTCACTGGAGTaGGCCCAGCTAGGGGTTGGGTCTCAGGTGACAGAG +
Preference number: 4 (lower is better)
Translates to: PSEEEKWVNSLE*AQLGVGSQVTE
Trigger: CTCTGTCACCTGAGACCCAACCCCTAGCTGGGCCAACTCCAGTGAATTCACCCATTTTTCTTCTTCAGAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR TCA 90 bp CTAGAATTGCATCGTAACAGTGTGGTCACACTGGTAAGAAATGCAGATTGGCAACCCTTCTGTGGTTCATaGGCAGCTCCCGGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: LELHRNSVVTLVRNADWQPFCGS*AAPGGA
Trigger: AGCTCCACCGGGAGCTGCTCATGAACCACAGAAGGG...TTGCCAATCTGCATTTCTTACCAGTGTGACCACACTGTTACGATGCAATTCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR TCA 90 bp TTTATGCACAATCAAGTTTGTGAGGCACCGCTGCAGACTTCTGAGTGCAGGAATCCAGGCCCTCTGGGGTaGCACATTTCTACAGAAGCA +
Preference number: 4 (lower is better)
Translates to: FMHNQVCEAPLQTSECRNPGPLG*HISTEA
Trigger: TGCTTCTGTAGAAATGTGTCACCCCAGAGGGCCTGG...ATTCCTGCACTCAGAAGTCTGCAGCGGTGCCTCACAAACTTGATTGTGCATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR TCA 90 bp GCTCACAGCATGGTCCTCACACCAGCAGCCTCCGCCTTACCTGGGAGCTTGTTAATCTCCCAGATCTATTaGGTTAGAAGCTGTATTAAC +
Preference number: 4 (lower is better)
Translates to: AHSMVLTPAASALPGSLLISQIY*VRSCIN
Trigger: GTTAATACAGCTTCTAACTCAATAGATCTGGGAGAT...TAACAAGCTCCCAGGTAAGGCGGAGGCTGCTGGTGTGAGGACCATGCTGTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR TCA 90 bp GTCCACAGGAGGTGGGGGCCAGCGATGGCTTCAGGGGTGATATTTCCAATATATCAAACCACCCAGTTATaGGTAAGACCAGAACAATCC +
Preference number: 4 (lower is better)
Translates to: VHRRWGPAMASGVIFPIYQTTQL*VRPEQS
Trigger: GGATTGTTCTGGTCTTACTCATAACTGGGTGGTTTG...ATATATTGGAAATATCACCCCTGAAGCCATCGCTGGCCCCCACCTCCTGTGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR TCA 90 bp ATGAGTAAGACCAGAACAATCCCTTTCCTCCGACAGTCCCACGTTTGCTTCCAGGAGCCTCTTGGAGCTTaGCTTATACACACGCACACA +
Preference number: 4 (lower is better)
Translates to: MSKTRTIPFLRQSHVCFQEPLGA*LIHTHT
Trigger: TGTGTGCGTGTGTATAAGTCAAGCTCCAAGAGGCTC...CTGGAAGCAAACGTGGGACTGTCGGAGGAAAGGGATTGTTCTGGTCTTACTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR TCA 90 bp CAACACTCACATAACCAACACAATTTGCTAGGCCAAAGTCTTCACGGGCAATCCCTCAGGAAGGGAAACTaGGGCAGCTGGGAAATGAGG +
Preference number: 4 (lower is better)
Translates to: QHSHNQHNLLGQSLHGQSLRKGN*GSWEMR
Trigger: CCTCATTTCCCAGCTGCCTCAGTTTCCCTTCCTGAG...GGATTGCCCGTGAAGACTTTGGCCTAGCAAATTGTGTTGGTTATGTGAGTGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp CGCCTTACCTGGGAGCTTGTTAGAAATGCAGGATCTCCCAGATCTATTGAGTTAAAGTCAGGAGCGTGTTaGTGGGTTCCTCACTCCACC +
Preference number: 4 (lower is better)
Translates to: RLTWELVRNAGSPRSIELKSGAC*WVPHST
Trigger: GGTGGAGTGAGGAACCCAGCAACACGCTCCTGACTT...TAACTCAATAGATCTGGGAGATCCTGCATTTCTAACAAGCTCCCAGGTAAGGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000649301.1
CDS-3UTR GCA 90 bp CTAGAATTGCATCGTAACAGTGTGGTCACACTGGTAAGAAATGCAGATTGGCAAAGCTGGTTCAGCCTCTaGTGCCGTCTCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LELHRNSVVTLVRNADWQSWFSL*CRLSSS
Trigger: GGAGCTGCTGAGACGGCAGCAGAGGCTGAACCAGCT...TTGCCAATCTGCATTTCTTACCAGTGTGACCACACTGTTACGATGCAATTCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp GGCCAGTCCATAAAGGTGGCAGTGGGGTCTTCAAACCACTGTTTCTATTCCAGACTTCCTCCTCAATTCTaGCAGAGAAAGCTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: GQSIKVAVGSSNHCFYSRLPPQF*QRKLLC
Trigger: GCACAGGAGCTTTCTCTGGCAGAATTGAGGAGGAAG...TCTGGAATAGAAACAGTGGTTTGAAGACCCCACTGCCACCTTTATGGACTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR GCA 90 bp CTAGAATTGCATCGTAACAGTGTGGTCACACTGGTAAGAAATGCAGATTGGCAAGCACTCTCGCCCTGCTaGTCACAGCATGGTCCTCAC +
Preference number: 4 (lower is better)
Translates to: LELHRNSVVTLVRNADWQALSPC*SQHGPH
Trigger: GTGAGGACCATGCTGTGAGCAGCAGGGCGAGAGTGC...TTGCCAATCTGCATTTCTTACCAGTGTGACCACACTGTTACGATGCAATTCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp TCAATTCTGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGCACACTGGTAAGAAATaGAGATTGGCAATCATGTAC +
Preference number: 4 (lower is better)
Translates to: SILPEKAPVLGSEPLAGRHTGKK*RLAIMY
Trigger: GTACATGATTGCCAATCTGCATTTCTTACCAGTGTG...CCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp CCCTCAGTGGCTTTGAAGGCAGGTGTCCTTGAAGCTAAGCTCTGCTGGCTGCAGCACACTGGTAAGAAATaGAGATTGGCAATCATGTAC +
Preference number: 4 (lower is better)
Translates to: PSVALKAGVLEAKLCWLQHTGKK*RLAIMY
Trigger: GTACATGATTGCCAATCTGCATTTCTTACCAGTGTG...CTGCAGCCAGCAGAGCTTAGCTTCAAGGACACCTGCCTTCAAAGCCACTGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp GTGATCTTTATTTTAGGGATTGTGCATCTTCAGTGTAACCCTCACCTGGCAGACCATGGACCCGAGGGCTaGTTCTTTGGGGAAGTGGTG +
Preference number: 4 (lower is better)
Translates to: VIFILGIVHLQCNPHLADHGPEG*FFGEVV
Trigger: CACCACTTCCCCAAAGAAGCAGCCCTCGGGTCCATG...GTCTGCCAGGTGAGGGTTACACTGAAGATGCACAATCCCTAAAATAAAGATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR GCA 90 bp GGCCAGTCCATAAAGGTGGCAGTGGGGTCTTCAAACCACTGTTTCTATTCCAGACATGGAATGACTTGTTaGCTCCATGGAGCACCTCTG +
Preference number: 4 (lower is better)
Translates to: GQSIKVAVGSSNHCFYSRHGMTC*LHGAPL
Trigger: CAGAGGTGCTCCATGGAGGCAACAAGTCATTCCATG...TCTGGAATAGAAACAGTGGTTTGAAGACCCCACTGCCACCTTTATGGACTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TCAGCTTCCCCATCTCTAAAATGGGAATGCCACCTGGCTCACAAGACAGTTATATTCTTCTTGATGAGCTaGTTCCGCCGGCGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: SASPSLKWECHLAHKTVIFFLMS*FRRRCS
Trigger: AGAGCACCGCCGGCGGAACCAGCTCATCAAGAAGAA...TATAACTGTCTTGTGAGCCAGGTGGCATTCCCATTTTAGAGATGGGGAAGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464064.5
CDS-3UTR CCA 90 bp GCTTTGAAGGCAGGTGTCCTTGAAGCTAAGCTCTGCTGGCTGCAGGTAAAACCACTCTTCCTTCTCTGGTaGTTTTTCCAGCTGGTTCAG +
Preference number: 4 (lower is better)
Translates to: ALKAGVLEAKLCWLQVKPLFLLW*FFQLVQ
Trigger: CTGAACCAGCTGGAAAAACCACCAGAGAAGGAAGAG...TGGTTTTACCTGCAGCCAGCAGAGCTTAGCTTCAAGGACACCTGCCTTCAAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp GTCCACAGGAGGTGGGGGCCAGCGATGGCTTCAGGGGTGATATTTCCAATATATATCCTCTTCCTTCTCTaGTGGTTTTTCCAGCTGGTT +
Preference number: 4 (lower is better)
Translates to: VHRRWGPAMASGVIFPIYILFLL*WFFQLV
Trigger: AACCAGCTGGAAAAACCACCAGAGAAGGAAGAGGAT...ATATATTGGAAATATCACCCCTGAAGCCATCGCTGGCCCCCACCTCCTGTGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp GGCCAGTCCATAAAGGTGGCAGTGGGGTCTTCAAACCACTGTTTCTATTCCAGACTTCGCTGGTCAGTGTaGCAATTCTCCGCAGGTTTT +
Preference number: 4 (lower is better)
Translates to: GQSIKVAVGSSNHCFYSRLRWSV*QFSAGF
Trigger: AAAACCTGCGGAGAATTGCCACACTGACCAGCGAAG...TCTGGAATAGAAACAGTGGTTTGAAGACCCCACTGCCACCTTTATGGACTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CGCCTTACCTGGGAGCTTGTTAGAAATGCAGGATCTCCCAGATCTATTGAGTTAGAGAGCCAGGCCCTCTaGGGTGACACATTTCTACAG +
Preference number: 4 (lower is better)
Translates to: RLTWELVRNAGSPRSIELESQAL*GDTFLQ
Trigger: CTGTAGAAATGTGTCACCCCAGAGGGCCTGGCTCTC...TAACTCAATAGATCTGGGAGATCCTGCATTTCTAACAAGCTCCCAGGTAAGGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp ACAAGATCCCCAGTGATTTTTATGCACAATCAAGTTTGTGAGGCACCGCTGCAGTTGGAGCAGGAGGGCTaGGTGCTTGGAAGGAAAACC +
Preference number: 4 (lower is better)
Translates to: TRSPVIFMHNQVCEAPLQLEQEG*VLGRKT
Trigger: GGTTTTCCTTCCAAGCACCCAGCCCTCCTGCTCCAA...CTGCAGCGGTGCCTCACAAACTTGATTGTGCATAAAAATCACTGGGGATCTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp GCTTTGAAGGCAGGTGTCCTTGAAGCTAAGCTCTGCTGGCTGCAGGTAAAACCAATAATGAAGGATACCTaGGGTTGCAGAAGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: ALKAGVLEAKLCWLQVKPIMKDT*GCRSGV
Trigger: CACCCCACTTCTGCAACCCCAGGTATCCTTCATTAT...TGGTTTTACCTGCAGCCAGCAGAGCTTAGCTTCAAGGACACCTGCCTTCAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CCAGCAGCCTCCGCCTTACCTGGGAGCTTGTTAGAAATGCAGGATCTCCCAGATTATCTGTGGCAGTTTTaGGAAAGTGAAAGGAGATGC +
Preference number: 4 (lower is better)
Translates to: PAASALPGSLLEMQDLPDYLWQF*ESERRC
Trigger: GCATCTCCTTTCACTTTCCCAAAACTGCCACAGATA...ATCTGGGAGATCCTGCATTTCTAACAAGCTCCCAGGTAAGGCGGAGGCTGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CAGGAATCAAAGAGCATGCCAGTGGCAGCTATCTGTGGCAGTTTTGGGAAAGTGCAAAGAGCATGCCAGTaGCAGCTATCTGTGGCAGTT +
Preference number: 4 (lower is better)
Translates to: QESKSMPVAAICGSFGKVQRACQ*QLSVAV
Trigger: AACTGCCACAGATAGCTGCCACTGGCATGCTCTTTG...CACTTTCCCAAAACTGCCACAGATAGCTGCCACTGGCATGCTCTTTGATTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp GCCCAGGGAGGTGTTAGCCATGCCTGTGTCTTTTATTGGAAAAGCTTTCCCAGAACCTCTGGGGCTTCATaGAATGACTTGTTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: AQGGVSHACVFYWKSFPRTSGAS*NDLLPP
Trigger: TGGAGGCAACAAGTCATTCCATGAAGCCCCAGAGGT...TCTGGGAAAGCTTTTCCAATAAAAGACACAGGCATGGCTAACACCTCCCTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TCCTCCTCAATTCTGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCATATTTACAAGAATTCTaGAGAAGGATGGCGGCTGGT +
Preference number: 4 (lower is better)
Translates to: SSSILPEKAPVLGSEPLAYLQEF*RRMAAG
Trigger: ACCAGCCGCCATCCTTCTCCAGAATTCTTGTAAATA...TGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTGAGGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TTCCCCATCTCTAAAATGGGAATGCCACCTGGCTCACAAGACAGTTATAAGAATTGCCCATCACCCACCTaGTTCAGCCTCTGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: FPISKMGMPPGSQDSYKNCPSPT*FSLCCR
Trigger: ACGGCAGCAGAGGCTGAACCAGGTGGGTGATGGGCA...ATTCTTATAACTGTCTTGTGAGCCAGGTGGCATTCCCATTTTAGAGATGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464064.5
CDS-3UTR CCA 90 bp TCACATAACCAACACAATTTGCTAGGCCAAAGTCTTCACGGGCAATCCCTGGGGTCCCCATCTCTAAAATaGGAATGCCACCTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: SHNQHNLLGQSLHGQSLGSPSLK*ECHLAH
Trigger: GTGAGCCAGGTGGCATTCCCATTTTAGAGATGGGGA...CCCCAGGGATTGCCCGTGAAGACTTTGGCCTAGCAAATTGTGTTGGTTATGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000464064.5
CDS-3UTR TCA 90 bp ACAAGATCCCCAGTGATTTTTATGCACAATCAAGTTTGTGAGGCACCGCTGCAGATAAACTCGGGGGCGTaGTCCTCTTCCTTCTCTGGT +
Preference number: 4 (lower is better)
Translates to: TRSPVIFMHNQVCEAPLQINSGA*SSSFSG
Trigger: ACCAGAGAAGGAAGAGGATCACGCCCCCGAGTTTAT...CTGCAGCGGTGCCTCACAAACTTGATTGTGCATAAAAATCACTGGGGATCTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR TCA 90 bp GTCCACAGGAGGTGGGGGCCAGCGATGGCTTCAGGGGTGATATTTCCAATATATACAGGAAAGGCCTTCTaGAGAAGAAAAATGGGTGAA +
Preference number: 4 (lower is better)
Translates to: VHRRWGPAMASGVIFPIYTGKAF*RRKMGE
Trigger: TTCACCCATTTTTCTTCTTCAGAAGGCCTTTCCTGT...ATATATTGGAAATATCACCCCTGAAGCCATCGCTGGCCCCCACCTCCTGTGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR TCA 90 bp TCACATAACCAACACAATTTGCTAGGCCAAAGTCTTCACGGGCAATCCCTGGGGTTCTCTTCACATGTCTaGACAACACATGGACCCGAG +
Preference number: 4 (lower is better)
Translates to: SHNQHNLLGQSLHGQSLGFSSHV*TTHGPE
Trigger: CTCGGGTCCATGTGTTGTTCAGACATGTGAAGAGAA...CCCCAGGGATTGCCCGTGAAGACTTTGGCCTAGCAAATTGTGTTGGTTATGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR TCA 90 bp GCCTGTGTCTTTTATTGGAAAAGCTTTCCCAGAAGCCCAGGTAGACTTCCTCTTTGGGGCTTCATGGAATaGCTTGTTGCCTCCATGGAG +
Preference number: 4 (lower is better)
Translates to: ACVFYWKSFPRSPGRLPLWGFME*LVASME
Trigger: CTCCATGGAGGCAACAAGTCATTCCATGAAGCCCCA...AAGAGGAAGTCTACCTGGGCTTCTGGGAAAGCTTTTCCAATAAAAGACACAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR TCA 90 bp TCCTCCTCAATTCTGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCACTGGTATTGGCTTGGTaGAATAATGATAGGGTCAAT +
Preference number: 4 (lower is better)
Translates to: SSSILPEKAPVLGSEPLALVLAW*NNDRVN
Trigger: ATTGACCCTATCATTATTTCACCAAGCCAATACCAG...TGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTGAGGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR TCA 90 bp TCGGAGATTCCTGGTGGGAAGGCCTGGGCAGAACAGAAGGCTTGTCAAGTCAGACTGGTATTGGCTTGGTaGAATAATGATAGGGTCAAT +
Preference number: 4 (lower is better)
Translates to: SEIPGGKAWAEQKACQVRLVLAW*NNDRVN
Trigger: ATTGACCCTATCATTATTTCACCAAGCCAATACCAG...TCTGACTTGACAAGCCTTCTGTTCTGCCCAGGCCTTCCCACCAGGAATCTCCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR TCA 90 bp GGCCAGTCCATAAAGGTGGCAGTGGGGTCTTCAAACCACTGTTTCTATTCCAGATCCAAGCCACACGCTTaGGAGGCACAAATAAATACC +
Preference number: 4 (lower is better)
Translates to: GQSIKVAVGSSNHCFYSRSKPHA*EAQINT
Trigger: GGTATTTATTTGTGCCTCTCAAGCGTGTGGCTTGGA...TCTGGAATAGAAACAGTGGTTTGAAGACCCCACTGCCACCTTTATGGACTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394481.5
CDS-3UTR GCA 90 bp GTGATCTTTATTTTAGGGATTGTGCATCTTCAGTGTAACCCTCACCTGGCAGACAGCAGGAGGGCTGGGTaGTTGGAAGGAAAACCTAGG +
Preference number: 4 (lower is better)
Translates to: VIFILGIVHLQCNPHLADSRRAG*LEGKPR
Trigger: CCTAGGTTTTCCTTCCAAGCACCCAGCCCTCCTGCT...GTCTGCCAGGTGAGGGTTACACTGAAGATGCACAATCCCTAAAATAAAGATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR GCA 90 bp GAAAAATGGGTGAATTCACTGGAGTTGGCCCAGCTAGGGGTTGGGTCTCAGGTGATGCTATTCCAGCACTaGTCTGTCACCTTAGATGAT +
Preference number: 4 (lower is better)
Translates to: EKWVNSLELAQLGVGSQVMLFQH*SVTLDD
Trigger: ATCATCTAAGGTGACAGAGCAGTGCTGGAATAGCAT...CACCTGAGACCCAACCCCTAGCTGGGCCAACTCCAGTGAATTCACCCATTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR GCA 90 bp CAGGAATCAAAGAGCATGCCAGTGGCAGCTATCTGTGGCAGTTTTGGGAAAGTGAGGAATCAAAGAGCATaGCAGTGGCAGCTATCTGTG +
Preference number: 4 (lower is better)
Translates to: QESKSMPVAAICGSFGKVRNQRA*QWQLSV
Trigger: CACAGATAGCTGCCACTGGCATGCTCTTTGATTCCT...CACTTTCCCAAAACTGCCACAGATAGCTGCCACTGGCATGCTCTTTGATTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR GCA 90 bp TCAAAGAGCATGCCAGTGGCAGCTATCTGTGGCAGTTTTGGGAAAGTGAAAGGACGACAGTCCCACGTTTaGTTCCAGGAATCAAAGAGC +
Preference number: 4 (lower is better)
Translates to: SKSMPVAAICGSFGKVKGRQSHV*FQESKS
Trigger: GCTCTTTGATTCCTGGAAGCAAACGTGGGACTGTCG...TCCTTTCACTTTCCCAAAACTGCCACAGATAGCTGCCACTGGCATGCTCTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp GCCCAGGGAGGTGTTAGCCATGCCTGTGTCTTTTATTGGAAAAGCTTTCCCAGACTCTTCCTTCTCTGGTaGTTTTTCCAGCTGGTTCAG +
Preference number: 4 (lower is better)
Translates to: AQGGVSHACVFYWKSFPRLFLLW*FFQLVQ
Trigger: CTGAACCAGCTGGAAAAACCACCAGAGAAGGAAGAG...TCTGGGAAAGCTTTTCCAATAAAAGACACAGGCATGGCTAACACCTCCCTGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CGCCTTACCTGGGAGCTTGTTAGAAATGCAGGATCTCCCAGATCTATTGAGTTAGCTCTCTCTCTTCGCTaGTCAGTGTGGCAATTCTCC +
Preference number: 4 (lower is better)
Translates to: RLTWELVRNAGSPRSIELALSLR*SVWQFS
Trigger: GGAGAATTGCCACACTGACCAGCGAAGAGAGAGAGC...TAACTCAATAGATCTGGGAGATCCTGCATTTCTAACAAGCTCCCAGGTAAGGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CTAGAATTGCATCGTAACAGTGTGGTCACACTGGTAAGAAATGCAGATTGGCAAGGAATGCGGCAGCCCTaGGTAGGTGTGGTTAGAAGG +
Preference number: 4 (lower is better)
Translates to: LELHRNSVVTLVRNADWQGMRQP*VGVVRR
Trigger: CCTTCTAACCACACCTACCCAGGGCTGCCGCATTCC...TTGCCAATCTGCATTTCTTACCAGTGTGACCACACTGTTACGATGCAATTCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CACAGGAGGTGGGGGCCAGCGATGGCTTCAGGGGTGATATTTCCAATATATATCCATTCAGGAGCCTCTTaGAGCTTGACTTATACACAC +
Preference number: 4 (lower is better)
Translates to: HRRWGPAMASGVIFPIYIHSGAS*SLTYTH
Trigger: GTGTGTATAAGTCAAGCTCCAAGAGGCTCCTGAATG...GATATATATTGGAAATATCACCCCTGAAGCCATCGCTGGCCCCCACCTCCTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp AAATGGGTGAATTCACTGGAGTTGGCCCAGCTAGGGGTTGGGTCTCAGGTGACAGCCTGTGTCTTTTATTaGAAAAGCTTTCCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: KWVNSLELAQLGVGSQVTACVFY*KSFPRS
Trigger: GCTTCTGGGAAAGCTTTTCCAATAAAAGACACAGGC...TGTCACCTGAGACCCAACCCCTAGCTGGGCCAACTCCAGTGAATTCACCCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp GTCCACAGGAGGTGGGGGCCAGCGATGGCTTCAGGGGTGATATTTCCAATATATTATTTACAAGAATTCTaGAGAAGGATGGCGGCTGGT +
Preference number: 4 (lower is better)
Translates to: VHRRWGPAMASGVIFPIYYLQEF*RRMAAG
Trigger: ACCAGCCGCCATCCTTCTCCAGAATTCTTGTAAATA...ATATATTGGAAATATCACCCCTGAAGCCATCGCTGGCCCCCACCTCCTGTGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TCACATAACCAACACAATTTGCTAGGCCAAAGTCTTCACGGGCAATCCCTGGGGTTCCCTTGTTTCTTATaGGAGGGTCAGGCAAGAGTG +
Preference number: 4 (lower is better)
Translates to: SHNQHNLLGQSLHGQSLGFPCFL*EGQARV
Trigger: CACTCTTGCCTGACCCTCCCATAAGAAACAAGGGAA...CCCCAGGGATTGCCCGTGAAGACTTTGGCCTAGCAAATTGTGTTGGTTATGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394481.5
CDS-3UTR CCA 90 bp TCAAAGAGCATGCCAGTGGCAGCTATCTGTGGCAGTTTTGGGAAAGTGAAAGGAAACAGATATTCCACTTaGTGCACGGCCACTTCCACG +
Preference number: 4 (lower is better)
Translates to: SKSMPVAAICGSFGKVKGNRYST*CTATST
Trigger: CGTGGAAGTGGCCGTGCACCAAGTGGAATATCTGTT...TCCTTTCACTTTCCCAAAACTGCCACAGATAGCTGCCACTGGCATGCTCTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394481.5
CDS-3UTR GCA 90 bp TCAAAGAGCATGCCAGTGGCAGCTATCTGTGGCAGTTTTGGGAAAGTGAAAGGACTTGAAGCTAAGCTCTaGTGGCTGCAGGTAAAACCA +
Preference number: 4 (lower is better)
Translates to: SKSMPVAAICGSFGKVKGLEAKL*WLQVKP
Trigger: TGGTTTTACCTGCAGCCAGCAGAGCTTAGCTTCAAG...TCCTTTCACTTTCCCAAAACTGCCACAGATAGCTGCCACTGGCATGCTCTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR GCA 90 bp GTCCACAGGAGGTGGGGGCCAGCGATGGCTTCAGGGGTGATATTTCCAATATATCACACTGGTAAGAAATaGAGATTGGCAATCATGTAC +
Preference number: 4 (lower is better)
Translates to: VHRRWGPAMASGVIFPIYHTGKK*RLAIMY
Trigger: GTACATGATTGCCAATCTGCATTTCTTACCAGTGTG...ATATATTGGAAATATCACCCCTGAAGCCATCGCTGGCCCCCACCTCCTGTGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp CACAGGAGGTGGGGGCCAGCGATGGCTTCAGGGGTGATATTTCCAATATATATCATGCTATTCCAGCACTaGTCTGTCACCTTAGATGAT +
Preference number: 4 (lower is better)
Translates to: HRRWGPAMASGVIFPIYIMLFQH*SVTLDD
Trigger: ATCATCTAAGGTGACAGAGCAGTGCTGGAATAGCAT...GATATATATTGGAAATATCACCCCTGAAGCCATCGCTGGCCCCCACCTCCTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR GCA 90 bp GGCCAGTCCATAAAGGTGGCAGTGGGGTCTTCAAACCACTGTTTCTATTCCAGAATAGCCATCCTAAGCTaGAAAGGAGACTGGAACAGT +
Preference number: 4 (lower is better)
Translates to: GQSIKVAVGSSNHCFYSRIAILS*KGDWNS
Trigger: ACTGTTCCAGTCTCCTTTGCAGCTTAGGATGGCTAT...TCTGGAATAGAAACAGTGGTTTGAAGACCCCACTGCCACCTTTATGGACTGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TCACATAACCAACACAATTTGCTAGGCCAAAGTCTTCACGGGCAATCCCTGGGGATCCTCTTCCTTCTCTaGTGGTTTTTCCAGCTGGTT +
Preference number: 4 (lower is better)
Translates to: SHNQHNLLGQSLHGQSLGILFLL*WFFQLV
Trigger: AACCAGCTGGAAAAACCACCAGAGAAGGAAGAGGAT...CCCCAGGGATTGCCCGTGAAGACTTTGGCCTAGCAAATTGTGTTGGTTATGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CAACACTCACATAACCAACACAATTTGCTAGGCCAAAGTCTTCACGGGCAATCCCTTCGCTGGTCAGTGTaGCAATTCTCCGCAGGTTTT +
Preference number: 4 (lower is better)
Translates to: QHSHNQHNLLGQSLHGQSLRWSV*QFSAGF
Trigger: AAAACCTGCGGAGAATTGCCACACTGACCAGCGAAG...GGATTGCCCGTGAAGACTTTGGCCTAGCAAATTGTGTTGGTTATGTGAGTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CAGGAATCAAAGAGCATGCCAGTGGCAGCTATCTGTGGCAGTTTTGGGAAAGTGCATTCAGGAGCCTCTTaGAGCTTGACTTATACACAC +
Preference number: 4 (lower is better)
Translates to: QESKSMPVAAICGSFGKVHSGAS*SLTYTH
Trigger: GTGTGTATAAGTCAAGCTCCAAGAGGCTCCTGAATG...CACTTTCCCAAAACTGCCACAGATAGCTGCCACTGGCATGCTCTTTGATTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CCAGTTATGAGTAAGACCAGAACAATCCCTTTCCTCCGACAGTCCCACGTTTGCAGTGTAACCCTCACCTaGCAGACATTAAACAGCGTA +
Preference number: 4 (lower is better)
Translates to: PVMSKTRTIPFLRQSHVCSVTLT*QTLNSV
Trigger: TACGCTGTTTAATGTCTGCCAGGTGAGGGTTACACT...GCAAACGTGGGACTGTCGGAGGAAAGGGATTGTTCTGGTCTTACTCATAACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TTTATGCACAATCAAGTTTGTGAGGCACCGCTGCAGACTTCTGAGTGCAGGAATACCTCTGGGGCTTCATaGAATGACTTGTTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: FMHNQVCEAPLQTSECRNTSGAS*NDLLPP
Trigger: TGGAGGCAACAAGTCATTCCATGAAGCCCCAGAGGT...ATTCCTGCACTCAGAAGTCTGCAGCGGTGCCTCACAAACTTGATTGTGCATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TTTATGCACAATCAAGTTTGTGAGGCACCGCTGCAGACTTCTGAGTGCAGGAATTACAGCCTCCACAGTTaGAGTGGCTGGAGATACAGA +
Preference number: 4 (lower is better)
Translates to: FMHNQVCEAPLQTSECRNYSLHS*SGWRYR
Trigger: TCTGTATCTCCAGCCACTCCAACTGTGGAGGCTGTA...ATTCCTGCACTCAGAAGTCTGCAGCGGTGCCTCACAAACTTGATTGTGCATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR TCA 90 bp GAAAAATGGGTGAATTCACTGGAGTTGGCCCAGCTAGGGGTTGGGTCTCAGGTGATCTCCCAGATCTATTaGGTTAGAAGCTGTATTAAC +
Preference number: 4 (lower is better)
Translates to: EKWVNSLELAQLGVGSQVISQIY*VRSCIN
Trigger: GTTAATACAGCTTCTAACTCAATAGATCTGGGAGAT...CACCTGAGACCCAACCCCTAGCTGGGCCAACTCCAGTGAATTCACCCATTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR TCA 90 bp ACACTGGTAAGAAATGCAGATTGGCAATCATGTACATCTCTGATTAAAACAACAGGAGGGCGTGGTGCTTaGGGTCCCTTCTACCTCTGG +
Preference number: 4 (lower is better)
Translates to: TLVRNADWQSCTSLIKTTGGRGA*GPFYLW
Trigger: CCAGAGGTAGAAGGGACCTCAAGCACCACGCCCTCC...TGTTGTTTTAATCAGAGATGTACATGATTGCCAATCTGCATTTCTTACCAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR GCA 90 bp ACACTGGTAAGAAATGCAGATTGGCAATCATGTACATCTCTGATTAAAACAACACAGGCCCCCAATGTCTaGCCGCTCCCTCTGGATCTC +
Preference number: 4 (lower is better)
Translates to: TLVRNADWQSCTSLIKTTQAPNV*PLPLDL
Trigger: GAGATCCAGAGGGAGCGGGCAGACATTGGGGGCCTG...TGTTGTTTTAATCAGAGATGTACATGATTGCCAATCTGCATTTCTTACCAGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp CAACACTCACATAACCAACACAATTTGCTAGGCCAAAGTCTTCACGGGCAATCCCTTGAAGCTAAGCTCTaGTGGCTGCAGGTAAAACCA +
Preference number: 4 (lower is better)
Translates to: QHSHNQHNLLGQSLHGQSLEAKL*WLQVKP
Trigger: TGGTTTTACCTGCAGCCAGCAGAGCTTAGCTTCAAG...GGATTGCCCGTGAAGACTTTGGCCTAGCAAATTGTGTTGGTTATGTGAGTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp ACACTGGTAAGAAATGCAGATTGGCAATCATGTACATCTCTGATTAAAACAACACCCACCTGGCCGGGATaGCAGCAACAAGGCCATCTG +
Preference number: 4 (lower is better)
Translates to: TLVRNADWQSCTSLIKTTPTWPG*QQQGHL
Trigger: CAGATGGCCTTGTTGCTGGCATCCCGGCCAGGTGGG...TGTTGTTTTAATCAGAGATGTACATGATTGCCAATCTGCATTTCTTACCAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp TCAAAGAGCATGCCAGTGGCAGCTATCTGTGGCAGTTTTGGGAAAGTGAAAGGAATGAAATTCAGAGACTaGTGTGTCCTTCTCAGGTCG +
Preference number: 4 (lower is better)
Translates to: SKSMPVAAICGSFGKVKGMKFRD*CVLLRS
Trigger: CGACCTGAGAAGGACACAGCAGTCTCTGAATTTCAT...TCCTTTCACTTTCCCAAAACTGCCACAGATAGCTGCCACTGGCATGCTCTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp GTGATCTTTATTTTAGGGATTGTGCATCTTCAGTGTAACCCTCACCTGGCAGACTGTCTGAACAACACATaGACCCGAGGGCTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: VIFILGIVHLQCNPHLADCLNNT*TRGLLL
Trigger: AAGAAGCAGCCCTCGGGTCCATGTGTTGTTCAGACA...GTCTGCCAGGTGAGGGTTACACTGAAGATGCACAATCCCTAAAATAAAGATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp GGCCAGTCCATAAAGGTGGCAGTGGGGTCTTCAAACCACTGTTTCTATTCCAGAGGAACAGTGAAAATCTaGATTTACAGCCTCCACAGT +
Preference number: 4 (lower is better)
Translates to: GQSIKVAVGSSNHCFYSRGTVKI*IYSLHS
Trigger: ACTGTGGAGGCTGTAAATCCAGATTTTCACTGTTCC...TCTGGAATAGAAACAGTGGTTTGAAGACCCCACTGCCACCTTTATGGACTGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp TCACATAACCAACACAATTTGCTAGGCCAAAGTCTTCACGGGCAATCCCTGGGGGCCTGTGTCTTTTATTaGAAAAGCTTTCCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: SHNQHNLLGQSLHGQSLGACVFY*KSFPRS
Trigger: GCTTCTGGGAAAGCTTTTCCAATAAAAGACACAGGC...CCCCAGGGATTGCCCGTGAAGACTTTGGCCTAGCAAATTGTGTTGGTTATGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR TCA 90 bp ACACTGGTAAGAAATGCAGATTGGCAATCATGTACATCTCTGATTAAAACAACACAGGTACAGAAGGGCTaGAGGAGGCTGTCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: TLVRNADWQSCTSLIKTTQVQKG*RRLSRP
Trigger: TGGCCTGGACAGCCTCCTTCAGCCCTTCTGTACCTG...TGTTGTTTTAATCAGAGATGTACATGATTGCCAATCTGCATTTCTTACCAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR TCA 90 bp GCTTTGAAGGCAGGTGTCCTTGAAGCTAAGCTCTGCTGGCTGCAGGTAAAACCAATCTCCCAGATCTATTaGGTTAGAAGCTGTATTAAC +
Preference number: 4 (lower is better)
Translates to: ALKAGVLEAKLCWLQVKPISQIY*VRSCIN
Trigger: GTTAATACAGCTTCTAACTCAATAGATCTGGGAGAT...TGGTTTTACCTGCAGCCAGCAGAGCTTAGCTTCAAGGACACCTGCCTTCAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR TCA 90 bp ACAAGATCCCCAGTGATTTTTATGCACAATCAAGTTTGTGAGGCACCGCTGCAGCAAACCACCCAGTTATaGGTAAGACCAGAACAATCC +
Preference number: 4 (lower is better)
Translates to: TRSPVIFMHNQVCEAPLQQTTQL*VRPEQS
Trigger: GGATTGTTCTGGTCTTACTCATAACTGGGTGGTTTG...CTGCAGCGGTGCCTCACAAACTTGATTGTGCATAAAAATCACTGGGGATCTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR TCA 90 bp GTGATCTTTATTTTAGGGATTGTGCATCTTCAGTGTAACCCTCACCTGGCAGACTTCATTGGCCACACCTaGTCACATAGCCATCCTAAG +
Preference number: 4 (lower is better)
Translates to: VIFILGIVHLQCNPHLADFIGHT*SHSHPK
Trigger: CTTAGGATGGCTATGTGATCAGGTGTGGCCAATGAA...GTCTGCCAGGTGAGGGTTACACTGAAGATGCACAATCCCTAAAATAAAGATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR TCA 90 bp ACAAGATCCCCAGTGATTTTTATGCACAATCAAGTTTGTGAGGCACCGCTGCAGTTAATAATAGACCTTTaGAGATGCTTGGGGTCCGGG +
Preference number: 4 (lower is better)
Translates to: TRSPVIFMHNQVCEAPLQLIIDL*RCLGSG
Trigger: CCCGGACCCCAAGCATCTTCAAAGGTCTATTATTAA...CTGCAGCGGTGCCTCACAAACTTGATTGTGCATAAAAATCACTGGGGATCTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000474531.5
ENST00000649301.1
CDS-3UTR GCA 90 bp CTAGAATTGCATCGTAACAGTGTGGTCACACTGGTAAGAAATGCAGATTGGCAACACAGGCGCAATATCTaGATTTACAGCCCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: LELHRNSVVTLVRNADWQHRRNI*IYSPVL
Trigger: CAGCACAGGGCTGTAAATGCAGATATTGCGCCTGTG...TTGCCAATCTGCATTTCTTACCAGTGTGACCACACTGTTACGATGCAATTCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp ACACTGGTAAGAAATGCAGATTGGCAATCATGTACATCTCTGATTAAAACAACAGGCACTGCAGCCGCTTaGCTTCCAGCTCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: TLVRNADWQSCTSLIKTTGTAAA*LPAPPS
Trigger: AGAAGGAGGAGCTGGAAGCCAAGCGGCTGCAGTGCC...TGTTGTTTTAATCAGAGATGTACATGATTGCCAATCTGCATTTCTTACCAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp ACACTGGTAAGAAATGCAGATTGGCAATCATGTACATCTCTGATTAAAACAACACTGAGACCTAGGAGCTaGGGTGTACGGAGAAGCGGG +
Preference number: 4 (lower is better)
Translates to: TLVRNADWQSCTSLIKTTLRPRS*GVRRSG
Trigger: CCCGCTTCTCCGTACACCCCAGCTCCTAGGTCTCAG...TGTTGTTTTAATCAGAGATGTACATGATTGCCAATCTGCATTTCTTACCAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CCA 90 bp GCTCACAAGACAGTTATAAGAATGAAATCAGAATCAGCATGCAGTACACTGGGCAGCCTCCGCCTTACCTaGGAGCTTGTTAGAAATGCA +
Preference number: 4 (lower is better)
Translates to: AHKTVIRMKSESACSTLGSLRLT*ELVRNA
Trigger: TGCATTTCTAACAAGCTCCCAGGTAAGGCGGAGGCT...GCCCAGTGTACTGCATGCTGATTCTGATTTCATTCTTATAACTGTCTTGTGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464064.5
CDS-3UTR CCA 90 bp CAACACTCACATAACCAACACAATTTGCTAGGCCAAAGTCTTCACGGGCAATCCAGTGGCAGCTATCTGTaGCAGTTTTGGGAAAGTGAA +
Preference number: 4 (lower is better)
Translates to: QHSHNQHNLLGQSLHGQSSGSYL*QFWESE
Trigger: TTCACTTTCCCAAAACTGCCACAGATAGCTGCCACT...GGATTGCCCGTGAAGACTTTGGCCTAGCAAATTGTGTTGGTTATGTGAGTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CTAGAATTGCATCGTAACAGTGTGGTCACACTGGTAAGAAATGCAGATTGGCAATGTCTGAACAACACATaGACCCGAGGGCTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: LELHRNSVVTLVRNADWQCLNNT*TRGLLL
Trigger: AAGAAGCAGCCCTCGGGTCCATGTGTTGTTCAGACA...TTGCCAATCTGCATTTCTTACCAGTGTGACCACACTGTTACGATGCAATTCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR TCA 90 bp GTGATCTTTATTTTAGGGATTGTGCATCTTCAGTGTAACCCTCACCTGGCAGACCAAACCACCCAGTTATaGGTAAGACCAGAACAATCC +
Preference number: 4 (lower is better)
Translates to: VIFILGIVHLQCNPHLADQTTQL*VRPEQS
Trigger: GGATTGTTCTGGTCTTACTCATAACTGGGTGGTTTG...GTCTGCCAGGTGAGGGTTACACTGAAGATGCACAATCCCTAAAATAAAGATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp GTGATCTTTATTTTAGGGATTGTGCATCTTCAGTGTAACCCTCACCTGGCAGACAGTGTAACCCTCACCTaGCAGACATTAAACAGCGTA +
Preference number: 4 (lower is better)
Translates to: VIFILGIVHLQCNPHLADSVTLT*QTLNSV
Trigger: TACGCTGTTTAATGTCTGCCAGGTGAGGGTTACACT...GTCTGCCAGGTGAGGGTTACACTGAAGATGCACAATCCCTAAAATAAAGATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR TCA 90 bp CTAGAATTGCATCGTAACAGTGTGGTCACACTGGTAAGAAATGCAGATTGGCAAAAATGTGCCAACAAGTaGGACAGCCTTTGCATTCCT +
Preference number: 4 (lower is better)
Translates to: LELHRNSVVTLVRNADWQKCANK*DSLCIP
Trigger: AGGAATGCAAAGGCTGTCTCACTTGTTGGCACATTT...TTGCCAATCTGCATTTCTTACCAGTGTGACCACACTGTTACGATGCAATTCTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394481.5
CDS-3UTR CCA 90 bp CTAGAATTGCATCGTAACAGTGTGGTCACACTGGTAAGAAATGCAGATTGGCAATATCTGTGGCAGTTTTaGGAAAGTGAAAGGAGATGC +
Preference number: 4 (lower is better)
Translates to: LELHRNSVVTLVRNADWQYLWQF*ESERRC
Trigger: GCATCTCCTTTCACTTTCCCAAAACTGCCACAGATA...TTGCCAATCTGCATTTCTTACCAGTGTGACCACACTGTTACGATGCAATTCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp CTAGAATTGCATCGTAACAGTGTGGTCACACTGGTAAGAAATGCAGATTGGCAAAGCTGCAAAGGAGACTaGAACAGTGAAAATCTGGAT +
Preference number: 4 (lower is better)
Translates to: LELHRNSVVTLVRNADWQSCKGD*NSENLD
Trigger: ATCCAGATTTTCACTGTTCCAGTCTCCTTTGCAGCT...TTGCCAATCTGCATTTCTTACCAGTGTGACCACACTGTTACGATGCAATTCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CCA 90 bp ACACTGGTAAGAAATGCAGATTGGCAATCATGTACATCTCTGATTAAAACAACATACTCTGAAAACCTGTaGAGTTTGGACCAAGGGCCC +
Preference number: 4 (lower is better)
Translates to: TLVRNADWQSCTSLIKTTYSENL*SLDQGP
Trigger: GGGCCCTTGGTCCAAACTCCACAGGTTTTCAGAGTA...TGTTGTTTTAATCAGAGATGTACATGATTGCCAATCTGCATTTCTTACCAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464064.5
CDS-3UTR TCA 90 bp ACACTGGTAAGAAATGCAGATTGGCAATCATGTACATCTCTGATTAAAACAACAAAGAAGAAAAATGGGTaGATTCACTGGAGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: TLVRNADWQSCTSLIKTTKKKNG*IHWSWP
Trigger: GGGCCAACTCCAGTGAATTCACCCATTTTTCTTCTT...TGTTGTTTTAATCAGAGATGTACATGATTGCCAATCTGCATTTCTTACCAGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS GCA 90 bp AGCCCGGTGGCATCGGAGGGCCCCCGGGCCCACTCGCCCAGCCTCTaGGCCATGCCCCCGCGCCTCCTACTGCAGAGCCAGCACTGCTGG +
Preference number: 5 (lower is better)
Translates to: SPVASEGPRAHSPSL*AMPPRLLLQSQHCW
Trigger: CCAGCAGTGCTGGCTCTGCAGTAGGAGGCGCGGGGGCATGGCGCAGAGGCTGGGCGAGTGGGCCCGGGGGCCCTCCGATGCCACCGGGCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000447756.2
CDS CCA 90 bp ACCTCTGCCTGGCCCAGCGGGCAGGACTTGGCCTTCTCACCTTGCTaGGCACCACTCAGCCGACAGGGCCAGACGGTGGAGGCCGTGGGC +
Preference number: 5 (lower is better)
Translates to: TSAWPSGQDLAFSPC*APLSRQGQTVEAVG
Trigger: GCCCACGGCCTCCACCGTCTGGCCCTGTCGGCTGAGTGGTGCCCAGCAAGGTGAGAAGGCCAAGTCCTGCCCGCTGGGCCAGGCAGAGGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474531.5
ENST00000649301.1
CDS GCA 90 bp GTGACCTCTGCCTGGCCCAGCGGGCAGGACTTGGCCTTCTCACCTTaGTGGGCACCACTCAGCCGACAGGGCCAGACGGTGGAGGCCGTG +
Preference number: 5 (lower is better)
Translates to: VTSAWPSGQDLAFSP*WAPLSRQGQTVEAV
Trigger: CACGGCCTCCACCGTCTGGCCCTGTCGGCTGAGTGGTGCCCAGCAAGGTGAGAAGGCCAAGTCCTGCCCGCTGGGCCAGGCAGAGGTCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474531.5
ENST00000649301.1
CDS GCA 90 bp GTCCTCTCATCACACACCGGTAGCTCAGGCGCGGCGGGTGACCTCTaGCTGGCCCAGCGGGCAGGACTTGGCCTTCTCACCTTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: VLSSHTGSSGAAGDL*LAQRAGLGLLTLLG
Trigger: GCCCAGCAAGGTGAGAAGGCCAAGTCCTGCCCGCTGGGCCAGGCAGAGGTCACCCGCCGCGCCTGAGCTACCGGTGTGTGATGAGAGGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474531.5
ENST00000649301.1
CDS CCA 90 bp TATTCTGGCCGGGCCATCAGGCCCCCAATGTCTGCCCGCTCCCTCTaGATCTCCGAGTACATGGCGGCCGACCGGAGCAGCACAGCCCGG +
Preference number: 5 (lower is better)
Translates to: YSGRAIRPPMSARSL*ISEYMAADRSSTAR
Trigger: CCGGGCTGTGCTGCTCCGGTCGGCCGCCATGTACTCGGAGATCCAGAGGGAGCGGGCAGACATTGGGGGCCTGATGGCCCGGCCAGAATA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447756.2
CDS-3UTR CAA 90 bp CCCAGGGCTGCCAGGTACAGAAGGGCTGAAGGAGGCTGTCCAGGCCAGGGTGGGGGGCACTGCAGCCGCTaGGCTTCCAGCTCCTCCTTC +
Preference number: 5 (lower is better)
Translates to: PRAARYRRAEGGCPGQGGGHCSR*ASSSSF
Trigger: GAAGGAGGAGCTGGAAGCCAAGCGGCTGCAGTGCCC...CCCACCCTGGCCTGGACAGCCTCCTTCAGCCCTTCTGTACCTGGCAGCCCTGGG
68% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS GCA 90 bp TGCGTGGTCCCTGCTGGGTGCCCATCACCCACCTGGTTCAGCCTCTaGTGCCGTCTCAGCAGCTCCTGCTCAAAGGGGCACTGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: CVVPAGCPSPTWFSL*CRLSSSCSKGHCSR
Trigger: GCGGCTGCAGTGCCCCTTTGAGCAGGAGCTGCTGAGACGGCAGCAGAGGCTGAACCAGGTGGGTGATGGGCACCCAGCAGGGACCACGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464064.5
CDS GCA 90 bp TCCTCCCTGGAGGACAGCCCTGGAGGATGCGTGGTCCCTGCTGGGTaGCCATCACCCACCTGGTTCAGCCTCTGCTGCCGTCTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: SSLEDSPGGCVVPAG*PSPTWFSLCCRLSS
Trigger: GCTGCTGAGACGGCAGCAGAGGCTGAACCAGGTGGGTGATGGGCACCCAGCAGGGACCACGCATCCTCCAGGGCTGTCCTCCAGGGAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464064.5
CDS GCA 90 bp GCAGAGCTCCTCCCTGGAGGACAGCCCTGGAGGATGCGTGGTCCCTaGTGGGTGCCCATCACCCACCTGGTTCAGCCTCTGCTGCCGTCT +
Preference number: 5 (lower is better)
Translates to: AELLPGGQPWRMRGP*WVPITHLVQPLLPS
Trigger: AGACGGCAGCAGAGGCTGAACCAGGTGGGTGATGGGCACCCAGCAGGGACCACGCATCCTCCAGGGCTGTCCTCCAGGGAGGAGCTCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464064.5
CDS CCA 90 bp GGCCACAGCAGAGCTCCTCCCTGGAGGACAGCCCTGGAGGATGCGTaGTCCCTGCTGGGTGCCCATCACCCACCTGGTTCAGCCTCTGCT +
Preference number: 5 (lower is better)
Translates to: GHSRAPPWRTALEDA*SLLGAHHPPGSASA
Trigger: AGCAGAGGCTGAACCAGGTGGGTGATGGGCACCCAGCAGGGACCACGCATCCTCCAGGGCTGTCCTCCAGGGAGGAGCTCTGCTGTGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464064.5
CDS-3UTR CAA 90 bp CCAGGGCTGCCAGGTACAGAAGGGCTGAAGGAGGCTGTCCAGGCCAGGGTGGGCTGGGCTCTGAACCCCTaGCAGGGAGGGGTGCAGGTT +
Preference number: 5 (lower is better)
Translates to: PGLPGTEGLKEAVQARVGWALNP*QGGVQV
Trigger: AACCTGCACCCCTCCCTGCAAGGGGTTCAGAGCCCA...GCCCACCCTGGCCTGGACAGCCTCCTTCAGCCCTTCTGTACCTGGCAGCCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CAA 90 bp TGGCCTGAGCCCGGCAGCTGGCCCTACAGCTCTCTCTCTTCGCTGGTCAGTGTGCGCTGCAGCTCTGGCTaGCTGTCCACACCAAGGCCC +
Preference number: 5 (lower is better)
Translates to: WPEPGSWPYSSLSSLVSVRCSSG*LSTPRP
Trigger: GGGCCTTGGTGTGGACAGCAAGCCAGAGCTGCAGCG...CACACTGACCAGCGAAGAGAGAGAGCTGTAGGGCCAGCTGCCGGGCTCAGGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464064.5
CDS-3UTR CAA 90 bp TGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGGGTGCAGCGCTGCAGCTCTGGCTaGCTGTCCACACCAAGGCCC +
Preference number: 5 (lower is better)
Translates to: CQRKLLCWALNPLQGGVQRCSSG*LSTPRP
Trigger: GGGCCTTGGTGTGGACAGCAAGCCAGAGCTGCAGCG...CTGCACCCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CAA 90 bp CAGGGAGGGGTGCAGGTTATCCCTCTTGGAGCAGGAGGGCTGGGTGCTTGGAAGGGGCACTGCAGCCGCTaGGCTTCCAGCTCCTCCTTC +
Preference number: 5 (lower is better)
Translates to: QGGVQVIPLGAGGLGAWKGHCSR*ASSSSF
Trigger: GAAGGAGGAGCTGGAAGCCAAGCGGCTGCAGTGCCC...CTTCCAAGCACCCAGCCCTCCTGCTCCAAGAGGGATAACCTGCACCCCTCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CAA 90 bp GGAATGCGGCAGCCCTGGGTAGGTGTGGTTAGAAGGCCTGGACGGGGAGGCTGTTCCTCCCTGCTGGCGTaGATCTCAGGAGCCAGGACC +
Preference number: 5 (lower is better)
Translates to: GMRQPWVGVVRRPGRGGCSSLLA*ISGART
Trigger: GGTCCTGGCTCCTGAGATCAACGCCAGCAGGGAGGA...ACAGCCTCCCCGTCCAGGCCTTCTAACCACACCTACCCAGGGCTGCCGCATTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474531.5
ENST00000649301.1
CDS CCA 90 bp TTACTAGCTGTGGCCACAGCAGAGCTCCTCCCTGGAGGACAGCCCTaGAGGATGCGTGGTCCCTGCTGGGTGCCCATCACCCACCTGGTT +
Preference number: 5 (lower is better)
Translates to: LLAVATAELLPGGQP*RMRGPCWVPITHLV
Trigger: AACCAGGTGGGTGATGGGCACCCAGCAGGGACCACGCATCCTCCAGGGCTGTCCTCCAGGGAGGAGCTCTGCTGTGGCCACAGCTAGTAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464064.5
CDS-3UTR CAA 90 bp CCCAGGGCTGCCAGGTACAGAAGGGCTGAAGGAGGCTGTCCAGGCCAGGGTGGGTCCTCCTTCTTCTTCTaGATGAGCTGGTTCCGCCGG +
Preference number: 5 (lower is better)
Translates to: PRAARYRRAEGGCPGQGGSSFFF*MSWFRR
Trigger: CCGGCGGAACCAGCTCATCAAGAAGAAGAAGGAGGA...CCCACCCTGGCCTGGACAGCCTCCTTCAGCCCTTCTGTACCTGGCAGCCCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CAA 90 bp TGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGGGTGCAGTGGGCTCTGAACCCCTaGCAGGGAGGGGTGCAGGTT +
Preference number: 5 (lower is better)
Translates to: CQRKLLCWALNPLQGGVQWALNP*QGGVQV
Trigger: AACCTGCACCCCTCCCTGCAAGGGGTTCAGAGCCCA...CTGCACCCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CAA 90 bp CCCAGGGCTGCCAGGTACAGAAGGGCTGAAGGAGGCTGTCCAGGCCAGGGTGGGCCTAAACAGCTGTCTTaGTTAGTCCCCGCCCACCTG +
Preference number: 5 (lower is better)
Translates to: PRAARYRRAEGGCPGQGGPKQLS*LVPAHL
Trigger: CAGGTGGGCGGGGACTAACAAAGACAGCTGTTTAGG...CCCACCCTGGCCTGGACAGCCTCCTTCAGCCCTTCTGTACCTGGCAGCCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CAA 90 bp CCAGGGCTGCCAGGTACAGAAGGGCTGAAGGAGGCTGTCCAGGCCAGGGTGGGCCCTAAACAGCTGTCTTaGTTAGTCCCCGCCCACCTG +
Preference number: 5 (lower is better)
Translates to: PGLPGTEGLKEAVQARVGPKQLS*LVPAHL
Trigger: CAGGTGGGCGGGGACTAACAAAGACAGCTGTTTAGG...GCCCACCCTGGCCTGGACAGCCTCCTTCAGCCCTTCTGTACCTGGCAGCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CAA 90 bp CCCAGGGCTGCCAGGTACAGAAGGGCTGAAGGAGGCTGTCCAGGCCAGGGTGGGGAAGGATACCTGGGGTaGCAGAAGTGGGGTGGGAAT +
Preference number: 5 (lower is better)
Translates to: PRAARYRRAEGGCPGQGGEGYLG*QKWGGN
Trigger: ATTCCCACCCCACTTCTGCAACCCCAGGTATCCTTC...CCCACCCTGGCCTGGACAGCCTCCTTCAGCCCTTCTGTACCTGGCAGCCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CAA 90 bp CAATTCTGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGGCGCTGCAGCTCTGGCTaGCTGTCCACACCAAGGCCC +
Preference number: 5 (lower is better)
Translates to: QFCQRKLLCWALNPLQGGRCSSG*LSTPRP
Trigger: GGGCCTTGGTGTGGACAGCAAGCCAGAGCTGCAGCG...CCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CAA 90 bp GGAATGCGGCAGCCCTGGGTAGGTGTGGTTAGAAGGCCTGGACGGGGAGGCTGTAGGAGGGCTGGGTGCTaGGAAGGAAAACCTAGGAGC +
Preference number: 5 (lower is better)
Translates to: GMRQPWVGVVRRPGRGGCRRAGC*EGKPRS
Trigger: GCTCCTAGGTTTTCCTTCCAAGCACCCAGCCCTCCT...ACAGCCTCCCCGTCCAGGCCTTCTAACCACACCTACCCAGGGCTGCCGCATTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CAA 90 bp GTGGGAAGGCCTGGGCAGAACAGAAGGCTTGTCAAGTCAGAGGGCCACCTCTTCCCCAGCGGGCAGGACTaGGCCTTCTCACCTTGCTGG +
Preference number: 5 (lower is better)
Translates to: VGRPGQNRRLVKSEGHLFPSGQD*AFSPCW
Trigger: CCAGCAAGGTGAGAAGGCCAAGTCCTGCCCGCTGGG...GAAGAGGTGGCCCTCTGACTTGACAAGCCTTCTGTTCTGCCCAGGCCTTCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CAA 90 bp TTTGTGAGGCACCGCTGCAGACTTCTGAGTGCAGGAATGCGGCAGCCCTGGGTACCCAGCGGGCAGGACTaGGCCTTCTCACCTTGCTGG +
Preference number: 5 (lower is better)
Translates to: FVRHRCRLLSAGMRQPWVPSGQD*AFSPCW
Trigger: CCAGCAAGGTGAGAAGGCCAAGTCCTGCCCGCTGGG...TACCCAGGGCTGCCGCATTCCTGCACTCAGAAGTCTGCAGCGGTGCCTCACAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CAA 90 bp CTACAGAAGCAGGTGGGAACATCACAGACGTCCCAGGGCCTGGGGCCCAGGGCTACAGGCTTAGGGCGATaGATCCTGACAGAGGGGCCA +
Preference number: 5 (lower is better)
Translates to: LQKQVGTSQTSQGLGPRATGLGR*ILTEGP
Trigger: TGGCCCCTCTGTCAGGATCAATCGCCCTAAGCCTGT...AGCCCTGGGCCCCAGGCCCTGGGACGTCTGTGATGTTCCCACCTGCTTCTGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474531.5
ENST00000649301.1
CDS CCA 90 bp TATTCTGGCCGGGCCATCAGGCCCCCAATGTCTGCCCGCTCCCTCTaGATCTCCGAGTACATGGCGGTTCTCAGGTCGAGTCCTTGGGAA +
Preference number: 5 (lower is better)
Translates to: YSGRAIRPPMSARSL*ISEYMAVLRSSPWE
Trigger: TTCCCAAGGACTCGACCTGAGAACCGCCATGTACTCGGAGATCCAGAGGGAGCGGGCAGACATTGGGGGCCTGATGGCCCGGCCAGAATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360997.7
ENST00000464064.5
CDS CCA 90 bp TATTCTGGCCGGGCCATCAGGCCCCCAATGTCTGCCCGCTCCCTCTaGATCTCCGAGTACATGGCGGCTGAGCCATTTCGTCTCTGCTTC +
Preference number: 5 (lower is better)
Translates to: YSGRAIRPPMSARSL*ISEYMAAEPFRLCF
Trigger: GAAGCAGAGACGAAATGGCTCAGCCGCCATGTACTCGGAGATCCAGAGGGAGCGGGCAGACATTGGGGGCCTGATGGCCCGGCCAGAATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465970.1
ENST00000474531.5
CDS-3UTR CAA 90 bp GTCTTTGTTAGTCCCCGCCCACCTGGCCGGGATGCCAGCAACAAGGCCATCTGCTCTCAGGTCGAGTCCTaGGGAAGGGAAGTCAGGAGC +
Preference number: 5 (lower is better)
Translates to: VFVSPRPPGRDASNKAICSQVES*GREVRS
Trigger: GCTCCTGACTTCCCTTCCCAAGGACTCGACCTGAGA...GCAGATGGCCTTGTTGCTGGCATCCCGGCCAGGTGGGCGGGGACTAACAAAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000649301.1
CDS-3UTR CAA 90 bp CACAGCATGGTCCTCACACCAGCAGCCTCCGCCTTACCTGGGAGCTTGTTAGAAGGGCACTGCAGCCGCTaGGCTTCCAGCTCCTCCTTC +
Preference number: 5 (lower is better)
Translates to: HSMVLTPAASALPGSLLEGHCSR*ASSSSF
Trigger: GAAGGAGGAGCTGGAAGCCAAGCGGCTGCAGTGCCC...TTCTAACAAGCTCCCAGGTAAGGCGGAGGCTGCTGGTGTGAGGACCATGCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CAA 90 bp AGTGGCCTGAGCCCGGCAGCTGGCCCTACAGCTCTCTCTCTTCGCTGGTCAGTGGAAAACCTGTGGAGTTaGGACCAAGGGCCCACTCAG +
Preference number: 5 (lower is better)
Translates to: SGLSPAAGPTALSLRWSVENLWS*DQGPTQ
Trigger: CTGAGTGGGCCCTTGGTCCAAACTCCACAGGTTTTC...CACTGACCAGCGAAGAGAGAGAGCTGTAGGGCCAGCTGCCGGGCTCAGGCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464064.5
CDS GCA 90 bp TTCTTCTTGATGAGCTGGTTCCGCCGGCGGTGCTCTAGGACACGCTaGAGCTCTGGCTTGCTGTCCACACCAAGGCCCCTTCTGTGGTTC +
Preference number: 5 (lower is better)
Translates to: FFLMSWFRRRCSRTR*SSGLLSTPRPLLWF
Trigger: GAACCACAGAAGGGGCCTTGGTGTGGACAGCAAGCCAGAGCTGCAGCGTGTCCTAGAGCACCGCCGGCGGAACCAGCTCATCAAGAAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000465970.1
ENST00000474531.5
ENST00000649301.1
CDS GCA 90 bp CGTAACGTGTCTGGGCCTTCATTTCTTTTTCTTCTTCCCCTGGGCTaGTCCCATGGCACGAAGTGGGCACCAGGCCTGGGTGGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: RNVSGPSFLFLLPLG*SHGTKWAPGLGGLQ
Trigger: CTGCAGCCCACCCAGGCCTGGTGCCCACTTCGTGCCATGGGAGCAGCCCAGGGGAAGAAGAAAAAGAAATGAAGGCCCAGACACGTTACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497310.1
CDS CCA 90 bp CAGCTTCTTGGGCTTGATGAGCTCCGGATTCCACTCTCTGTATTCTaGCCGGGCCATCAGGCCCCCAATGTCTGCCCGCTCCCTCTGGAT +
Preference number: 5 (lower is better)
Translates to: QLLGLDELRIPLSVF*PGHQAPNVCPLPLD
Trigger: ATCCAGAGGGAGCGGGCAGACATTGGGGGCCTGATGGCCCGGCCAGAATACAGAGAGTGGAATCCGGAGCTCATCAAGCCCAAGAAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000465970.1
ENST00000474531.5
ENST00000649301.1
CDS CCA 90 bp CTTCTCAGGTCGAGTCCTTGGGAAGGGAAGTCAGGAGCGTGTTGCTaGGTTCCTCACTCCACCGGGAAGTCCCAGACTAGCAAGGAGGGC +
Preference number: 5 (lower is better)
Translates to: LLRSSPWEGKSGACC*VPHSTGKSQTSKEG
Trigger: GCCCTCCTTGCTAGTCTGGGACTTCCCGGTGGAGTGAGGAACCCAGCAACACGCTCCTGACTTCCCTTCCCAAGGACTCGACCTGAGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CAA 90 bp TGTGAGGCACCGCTGCAGACTTCTGAGTGCAGGAATGCGGCAGCCCTGGGTAGGAGCAGCTTCTTGGGCTaGATGAGCTCCGGATTCCAC +
Preference number: 5 (lower is better)
Translates to: CEAPLQTSECRNAAALGRSSFLG*MSSGFH
Trigger: GTGGAATCCGGAGCTCATCAAGCCCAAGAAGCTGCT...CCTACCCAGGGCTGCCGCATTCCTGCACTCAGAAGTCTGCAGCGGTGCCTCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CAA 90 bp TTTGTGAGGCACCGCTGCAGACTTCTGAGTGCAGGAATGCGGCAGCCCTGGGTATGCAGGTTATCCCTCTaGGAGCAGGAGGGCTGGGTG +
Preference number: 5 (lower is better)
Translates to: FVRHRCRLLSAGMRQPWVCRLSL*EQEGWV
Trigger: CACCCAGCCCTCCTGCTCCAAGAGGGATAACCTGCA...TACCCAGGGCTGCCGCATTCCTGCACTCAGAAGTCTGCAGCGGTGCCTCACAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CAA 90 bp CAATTCTGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGGTGCAGGTTATCCCTCTaGGAGCAGGAGGGCTGGGTG +
Preference number: 5 (lower is better)
Translates to: QFCQRKLLCWALNPLQGGCRLSL*EQEGWV
Trigger: CACCCAGCCCTCCTGCTCCAAGAGGGATAACCTGCA...CCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CAA 90 bp CAGGGAGGGGTGCAGGTTATCCCTCTTGGAGCAGGAGGGCTGGGTGCTTGGAAGCCTAAACAGCTGTCTTaGTTAGTCCCCGCCCACCTG +
Preference number: 5 (lower is better)
Translates to: QGGVQVIPLGAGGLGAWKPKQLS*LVPAHL
Trigger: CAGGTGGGCGGGGACTAACAAAGACAGCTGTTTAGG...CTTCCAAGCACCCAGCCCTCCTGCTCCAAGAGGGATAACCTGCACCCCTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CAA 90 bp CAGGGAGGGGTGCAGGTTATCCCTCTTGGAGCAGGAGGGCTGGGTGCTTGGAAGGAAGGATACCTGGGGTaGCAGAAGTGGGGTGGGAAT +
Preference number: 5 (lower is better)
Translates to: QGGVQVIPLGAGGLGAWKEGYLG*QKWGGN
Trigger: ATTCCCACCCCACTTCTGCAACCCCAGGTATCCTTC...CTTCCAAGCACCCAGCCCTCCTGCTCCAAGAGGGATAACCTGCACCCCTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CAA 90 bp GTCTTTGTTAGTCCCCGCCCACCTGGCCGGGATGCCAGCAACAAGGCCATCTGCGAAGGATACCTGGGGTaGCAGAAGTGGGGTGGGAAT +
Preference number: 5 (lower is better)
Translates to: VFVSPRPPGRDASNKAICEGYLG*QKWGGN
Trigger: ATTCCCACCCCACTTCTGCAACCCCAGGTATCCTTC...GCAGATGGCCTTGTTGCTGGCATCCCGGCCAGGTGGGCGGGGACTAACAAAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CAA 90 bp GTGGGAAGGCCTGGGCAGAACAGAAGGCTTGTCAAGTCAGAGGGCCACCTCTTCTGGAGGGCGTGGTGCTaGAGGTCCCTTCTACCTCTG +
Preference number: 5 (lower is better)
Translates to: VGRPGQNRRLVKSEGHLFWRAWC*RSLLPL
Trigger: CAGAGGTAGAAGGGACCTCAAGCACCACGCCCTCCA...GAAGAGGTGGCCCTCTGACTTGACAAGCCTTCTGTTCTGCCCAGGCCTTCCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS TCA 90 bp CAGCTCCTCACCTCCCAGAACCCTGCCTCTCTCAGGAAGGGAAACTaGGGCAGCTGGGAAATGAGGGAAGACGTGGGGCAGTCCTCTCAT +
Preference number: 5 (lower is better)
Translates to: QLLTSQNPASLRKGN*GSWEMREDVGQSSH
Trigger: ATGAGAGGACTGCCCCACGTCTTCCCTCATTTCCCAGCTGCCTCAGTTTCCCTTCCTGAGAGAGGCAGGGTTCTGGGAGGTGAGGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000474531.5
ENST00000497310.1
ENST00000649301.1
CDS GCA 90 bp GTCCTTCTCAGGTCGAGTCCTTGGGAAGGGAAGTCAGGAGCGTGTTaGTGGGTTCCTCACTCCACCGGGAAGTCCCAGACTAGCAAGGAG +
Preference number: 5 (lower is better)
Translates to: VLLRSSPWEGKSGAC*WVPHSTGKSQTSKE
Trigger: CTCCTTGCTAGTCTGGGACTTCCCGGTGGAGTGAGGAACCCAGCAACACGCTCCTGACTTCCCTTCCCAAGGACTCGACCTGAGAAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394481.5
ENST00000649301.1
CDS CCA 90 bp AATGGCGTAACGTGTCTGGGCCTTCATTTCTTTTTCTTCTTCCCCTaGGCTGCTCCCATGGCACGAAGTGGGCACCAGGCCTGGGTGGGC +
Preference number: 5 (lower is better)
Translates to: NGVTCLGLHFFFFFP*AAPMARSGHQAWVG
Trigger: GCCCACCCAGGCCTGGTGCCCACTTCGTGCCATGGGAGCAGCCCAGGGGAAGAAGAAAAAGAAATGAAGGCCCAGACACGTTACGCCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497310.1
CDS-3UTR CAA 90 bp TTCCTGGTGGGAAGGCCTGGGCAGAACAGAAGGCTTGTCAAGTCAGAGGGCCACGAAGTCAGGAGCGTGTaGCTGGGTTCCTCACTCCAC +
Preference number: 5 (lower is better)
Translates to: FLVGRPGQNRRLVKSEGHEVRSV*LGSSLH
Trigger: GTGGAGTGAGGAACCCAGCAACACGCTCCTGACTTC...GTGGCCCTCTGACTTGACAAGCCTTCTGTTCTGCCCAGGCCTTCCCACCAGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000649301.1
CDS-3UTR CAA 90 bp AACCACAGGTGGGGGAGTTCTCTGAGACCTAGGAGCTGGGGTGTACGGAGAAGCAGGAGGGCTGGGTGCTaGGAAGGAAAACCTAGGAGC +
Preference number: 5 (lower is better)
Translates to: NHRWGSSLRPRSWGVRRSRRAGC*EGKPRS
Trigger: GCTCCTAGGTTTTCCTTCCAAGCACCCAGCCCTCCT...GCTTCTCCGTACACCCCAGCTCCTAGGTCTCAGAGAACTCCCCCACCTGTGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CAA 90 bp TTTGTGAGGCACCGCTGCAGACTTCTGAGTGCAGGAATGCGGCAGCCCTGGGTAAGGAGGGCTGGGTGCTaGGAAGGAAAACCTAGGAGC +
Preference number: 5 (lower is better)
Translates to: FVRHRCRLLSAGMRQPWVRRAGC*EGKPRS
Trigger: GCTCCTAGGTTTTCCTTCCAAGCACCCAGCCCTCCT...TACCCAGGGCTGCCGCATTCCTGCACTCAGAAGTCTGCAGCGGTGCCTCACAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CAA 90 bp CACAGCATGGTCCTCACACCAGCAGCCTCCGCCTTACCTGGGAGCTTGTTAGAATGCAGGTTATCCCTCTaGGAGCAGGAGGGCTGGGTG +
Preference number: 5 (lower is better)
Translates to: HSMVLTPAASALPGSLLECRLSL*EQEGWV
Trigger: CACCCAGCCCTCCTGCTCCAAGAGGGATAACCTGCA...TTCTAACAAGCTCCCAGGTAAGGCGGAGGCTGCTGGTGTGAGGACCATGCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CAA 90 bp GTCTTTGTTAGTCCCCGCCCACCTGGCCGGGATGCCAGCAACAAGGCCATCTGCGGAGCCTCTTGGAGCTaGACTTATACACACGCACAC +
Preference number: 5 (lower is better)
Translates to: VFVSPRPPGRDASNKAICGASWS*TYTHAH
Trigger: GTGTGCGTGTGTATAAGTCAAGCTCCAAGAGGCTCC...GCAGATGGCCTTGTTGCTGGCATCCCGGCCAGGTGGGCGGGGACTAACAAAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CAA 90 bp CACAGCATGGTCCTCACACCAGCAGCCTCCGCCTTACCTGGGAGCTTGTTAGAATCCCCAGGCATTCCCTaGGAGAGCCCTCGTCCATCT +
Preference number: 5 (lower is better)
Translates to: HSMVLTPAASALPGSLLESPGIP*ESPRPS
Trigger: AGATGGACGAGGGCTCTCCAAGGGAATGCCTGGGGA...TTCTAACAAGCTCCCAGGTAAGGCGGAGGCTGCTGGTGTGAGGACCATGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS CCA 90 bp TATTCTGGCCGGGCCATCAGGCCCCCAATGTCTGCCCGCTCCCTCTaGATCTCCGAGTACATGGCGGCCTTATTGTCTAACTCTATCCAC +
Preference number: 5 (lower is better)
Translates to: YSGRAIRPPMSARSL*ISEYMAALLSNSIH
Trigger: GTGGATAGAGTTAGACAATAAGGCCGCCATGTACTCGGAGATCCAGAGGGAGCGGGCAGACATTGGGGGCCTGATGGCCCGGCCAGAATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CAA 90 bp TCAATTCTGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGGAAGTCAGGAGCGTGTaGCTGGGTTCCTCACTCCAC +
Preference number: 5 (lower is better)
Translates to: SILPEKAPVLGSEPLAGREVRSV*LGSSLH
Trigger: GTGGAGTGAGGAACCCAGCAACACGCTCCTGACTTC...CCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000649301.1
CDS-3UTR CAA 90 bp CAATTCTGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGGTCCTCCTTCTTCTTCTaGATGAGCTGGTTCCGCCGG +
Preference number: 5 (lower is better)
Translates to: QFCQRKLLCWALNPLQGGSSFFF*MSWFRR
Trigger: CCGGCGGAACCAGCTCATCAAGAAGAAGAAGGAGGA...CCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CAA 90 bp CAATTTGCTAGGCCAAAGTCTTCACGGGCAATCCCTGGGGTGGGAGTCTGGGATTGCAGGTTATCCCTCTaGGAGCAGGAGGGCTGGGTG +
Preference number: 5 (lower is better)
Translates to: QFARPKSSRAIPGVGVWDCRLSL*EQEGWV
Trigger: CACCCAGCCCTCCTGCTCCAAGAGGGATAACCTGCA...ATCCCAGACTCCCACCCCAGGGATTGCCCGTGAAGACTTTGGCCTAGCAAATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CAA 90 bp CCCAGGGCTGCCAGGTACAGAAGGGCTGAAGGAGGCTGTCCAGGCCAGGGTGGGCATAACCAACACAATTaGCTAGGCCAAAGTCTTCAC +
Preference number: 5 (lower is better)
Translates to: PRAARYRRAEGGCPGQGGHNQHN*LGQSLH
Trigger: GTGAAGACTTTGGCCTAGCAAATTGTGTTGGTTATG...CCCACCCTGGCCTGGACAGCCTCCTTCAGCCCTTCTGTACCTGGCAGCCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CAA 90 bp CCCTCAGTGGCTTTGAAGGCAGGTGTCCTTGAAGCTAAGCTCTGCTGGCTGCAGGTGAATTCACTGGAGTaGGCCCAGCTAGGGGTTGGG +
Preference number: 5 (lower is better)
Translates to: PSVALKAGVLEAKLCWLQVNSLE*AQLGVG
Trigger: CCCAACCCCTAGCTGGGCCAACTCCAGTGAATTCAC...CTGCAGCCAGCAGAGCTTAGCTTCAAGGACACCTGCCTTCAAAGCCACTGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CAA 90 bp CCCAGGGCTGCCAGGTACAGAAGGGCTGAAGGAGGCTGTCCAGGCCAGGGTGGGATTAATAATAGACCTTaGAAGATGCTTGGGGTCCGG +
Preference number: 5 (lower is better)
Translates to: PRAARYRRAEGGCPGQGGINNRP*KMLGVR
Trigger: CCGGACCCCAAGCATCTTCAAAGGTCTATTATTAAT...CCCACCCTGGCCTGGACAGCCTCCTTCAGCCCTTCTGTACCTGGCAGCCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474531.5
ENST00000649301.1
CDS TCA 90 bp AGGACTCAGGCCAGGAGTGGACTCTTAGTCCAGTGCTCTGTCTGCTaGTCCTCTTCCCTCTTACTAGCTGTGGCCACAGCAGAGCTCCTC +
Preference number: 5 (lower is better)
Translates to: RTQARSGLLVQCSVC*SSSLLLAVATAELL
Trigger: GAGGAGCTCTGCTGTGGCCACAGCTAGTAAGAGGGAAGAGGATCAGCAGACAGAGCACTGGACTAAGAGTCCACTCCTGGCCTGAGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464064.5
CDS-3UTR CAA 90 bp CCCTCAGTGGCTTTGAAGGCAGGTGTCCTTGAAGCTAAGCTCTGCTGGCTGCAGAGCAGCTTCTTGGGCTaGATGAGCTCCGGATTCCAC +
Preference number: 5 (lower is better)
Translates to: PSVALKAGVLEAKLCWLQSSFLG*MSSGFH
Trigger: GTGGAATCCGGAGCTCATCAAGCCCAAGAAGCTGCT...CTGCAGCCAGCAGAGCTTAGCTTCAAGGACACCTGCCTTCAAAGCCACTGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CAA 90 bp CCAGTTATGAGTAAGACCAGAACAATCCCTTTCCTCCGACAGTCCCACGTTTGCCGCTGCAGCTCTGGCTaGCTGTCCACACCAAGGCCC +
Preference number: 5 (lower is better)
Translates to: PVMSKTRTIPFLRQSHVCRCSSG*LSTPRP
Trigger: GGGCCTTGGTGTGGACAGCAAGCCAGAGCTGCAGCG...GCAAACGTGGGACTGTCGGAGGAAAGGGATTGTTCTGGTCTTACTCATAACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CAA 90 bp TCGGAGATTCCTGGTGGGAAGGCCTGGGCAGAACAGAAGGCTTGTCAAGTCAGAAGGAGGGCTGGGTGCTaGGAAGGAAAACCTAGGAGC +
Preference number: 5 (lower is better)
Translates to: SEIPGGKAWAEQKACQVRRRAGC*EGKPRS
Trigger: GCTCCTAGGTTTTCCTTCCAAGCACCCAGCCCTCCT...TCTGACTTGACAAGCCTTCTGTTCTGCCCAGGCCTTCCCACCAGGAATCTCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CAA 90 bp AGGGAGGACTCAGGCCAGGAGTGGACTCTTAGTCCAGTGCTCTGTCTGCTGATCCCTAAACAGCTGTCTTaGTTAGTCCCCGCCCACCTG +
Preference number: 5 (lower is better)
Translates to: REDSGQEWTLSPVLCLLIPKQLS*LVPAHL
Trigger: CAGGTGGGCGGGGACTAACAAAGACAGCTGTTTAGG...GATCAGCAGACAGAGCACTGGACTAAGAGTCCACTCCTGGCCTGAGTCCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464064.5
CDS-3UTR CAA 90 bp GCTCACAGCATGGTCCTCACACCAGCAGCCTCCGCCTTACCTGGGAGCTTGTTAGGAGCCTCTTGGAGCTaGACTTATACACACGCACAC +
Preference number: 5 (lower is better)
Translates to: AHSMVLTPAASALPGSLLGASWS*TYTHAH
Trigger: GTGTGCGTGTGTATAAGTCAAGCTCCAAGAGGCTCC...TAACAAGCTCCCAGGTAAGGCGGAGGCTGCTGGTGTGAGGACCATGCTGTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CAA 90 bp GAAAAATGGGTGAATTCACTGGAGTTGGCCCAGCTAGGGGTTGGGTCTCAGGTGTCCCCAGGCATTCCCTaGGAGAGCCCTCGTCCATCT +
Preference number: 5 (lower is better)
Translates to: EKWVNSLELAQLGVGSQVSPGIP*ESPRPS
Trigger: AGATGGACGAGGGCTCTCCAAGGGAATGCCTGGGGA...CACCTGAGACCCAACCCCTAGCTGGGCCAACTCCAGTGAATTCACCCATTTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CAA 90 bp CAGGGAGGGGTGCAGGTTATCCCTCTTGGAGCAGGAGGGCTGGGTGCTTGGAAGGTCCAAGCCACACGCTaGAGAGGCACAAATAAATAC +
Preference number: 5 (lower is better)
Translates to: QGGVQVIPLGAGGLGAWKVQATR*RGTNKY
Trigger: GTATTTATTTGTGCCTCTCAAGCGTGTGGCTTGGAC...CTTCCAAGCACCCAGCCCTCCTGCTCCAAGAGGGATAACCTGCACCCCTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394481.5
CDS-3UTR CAA 90 bp TCGGAGATTCCTGGTGGGAAGGCCTGGGCAGAACAGAAGGCTTGTCAAGTCAGAACAGGCTTAGGGCGATaGATCCTGACAGAGGGGCCA +
Preference number: 5 (lower is better)
Translates to: SEIPGGKAWAEQKACQVRTGLGR*ILTEGP
Trigger: TGGCCCCTCTGTCAGGATCAATCGCCCTAAGCCTGT...TCTGACTTGACAAGCCTTCTGTTCTGCCCAGGCCTTCCCACCAGGAATCTCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CAA 90 bp CACAGGAGGTGGGGGCCAGCGATGGCTTCAGGGGTGATATTTCCAATATATATCTCCTCCCTGCTGGCGTaGATCTCAGGAGCCAGGACC +
Preference number: 5 (lower is better)
Translates to: HRRWGPAMASGVIFPIYISSLLA*ISGART
Trigger: GGTCCTGGCTCCTGAGATCAACGCCAGCAGGGAGGA...GATATATATTGGAAATATCACCCCTGAAGCCATCGCTGGCCCCCACCTCCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CAA 90 bp TCCTCCTCAATTCTGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAAGCAGCTTCTTGGGCTaGATGAGCTCCGGATTCCAC +
Preference number: 5 (lower is better)
Translates to: SSSILPEKAPVLGSEPLASSFLG*MSSGFH
Trigger: GTGGAATCCGGAGCTCATCAAGCCCAAGAAGCTGCT...TGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTGAGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CAA 90 bp TCGGAGATTCCTGGTGGGAAGGCCTGGGCAGAACAGAAGGCTTGTCAAGTCAGATCCTCCTTCTTCTTCTaGATGAGCTGGTTCCGCCGG +
Preference number: 5 (lower is better)
Translates to: SEIPGGKAWAEQKACQVRSSFFF*MSWFRR
Trigger: CCGGCGGAACCAGCTCATCAAGAAGAAGAAGGAGGA...TCTGACTTGACAAGCCTTCTGTTCTGCCCAGGCCTTCCCACCAGGAATCTCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CAA 90 bp GGCCAGTCCATAAAGGTGGCAGTGGGGTCTTCAAACCACTGTTTCTATTCCAGATGGGCTCTGAACCCCTaGCAGGGAGGGGTGCAGGTT +
Preference number: 5 (lower is better)
Translates to: GQSIKVAVGSSNHCFYSRWALNP*QGGVQV
Trigger: AACCTGCACCCCTCCCTGCAAGGGGTTCAGAGCCCA...TCTGGAATAGAAACAGTGGTTTGAAGACCCCACTGCCACCTTTATGGACTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CAA 90 bp TCCTCCTCAATTCTGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGAAGGATACCTGGGGTaGCAGAAGTGGGGTGGGAAT +
Preference number: 5 (lower is better)
Translates to: SSSILPEKAPVLGSEPLAEGYLG*QKWGGN
Trigger: ATTCCCACCCCACTTCTGCAACCCCAGGTATCCTTC...TGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTGAGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CAA 90 bp GTCCACAGGAGGTGGGGGCCAGCGATGGCTTCAGGGGTGATATTTCCAATATATGTGAATTCACTGGAGTaGGCCCAGCTAGGGGTTGGG +
Preference number: 5 (lower is better)
Translates to: VHRRWGPAMASGVIFPIYVNSLE*AQLGVG
Trigger: CCCAACCCCTAGCTGGGCCAACTCCAGTGAATTCAC...ATATATTGGAAATATCACCCCTGAAGCCATCGCTGGCCCCCACCTCCTGTGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CAA 90 bp TTCCTGGTGGGAAGGCCTGGGCAGAACAGAAGGCTTGTCAAGTCAGAGGGCCACCTGAGACCCTCTGTCTaGCTTCTCTTCACATGTCTG +
Preference number: 5 (lower is better)
Translates to: FLVGRPGQNRRLVKSEGHLRPSV*LLFTCL
Trigger: CAGACATGTGAAGAGAAGCAAGACAGAGGGTCTCAG...GTGGCCCTCTGACTTGACAAGCCTTCTGTTCTGCCCAGGCCTTCCCACCAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CAA 90 bp CACAGGAGGTGGGGGCCAGCGATGGCTTCAGGGGTGATATTTCCAATATATATCTGGAGGGCGTGGTGCTaGAGGTCCCTTCTACCTCTG +
Preference number: 5 (lower is better)
Translates to: HRRWGPAMASGVIFPIYIWRAWC*RSLLPL
Trigger: CAGAGGTAGAAGGGACCTCAAGCACCACGCCCTCCA...GATATATATTGGAAATATCACCCCTGAAGCCATCGCTGGCCCCCACCTCCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CAA 90 bp GCAGCCTCCGCCTTACCTGGGAGCTTGTTAGAAATGCAGGATCTCCCAGATCTAAGCAGCTTCTTGGGCTaGATGAGCTCCGGATTCCAC +
Preference number: 5 (lower is better)
Translates to: AASALPGSLLEMQDLPDLSSFLG*MSSGFH
Trigger: GTGGAATCCGGAGCTCATCAAGCCCAAGAAGCTGCT...TAGATCTGGGAGATCCTGCATTTCTAACAAGCTCCCAGGTAAGGCGGAGGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CAA 90 bp TTTATGCACAATCAAGTTTGTGAGGCACCGCTGCAGACTTCTGAGTGCAGGAATCGCTGCAGCTCTGGCTaGCTGTCCACACCAAGGCCC +
Preference number: 5 (lower is better)
Translates to: FMHNQVCEAPLQTSECRNRCSSG*LSTPRP
Trigger: GGGCCTTGGTGTGGACAGCAAGCCAGAGCTGCAGCG...ATTCCTGCACTCAGAAGTCTGCAGCGGTGCCTCACAAACTTGATTGTGCATAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CAA 90 bp TTTATGCACAATCAAGTTTGTGAGGCACCGCTGCAGACTTCTGAGTGCAGGAATGGGCACTGCAGCCGCTaGGCTTCCAGCTCCTCCTTC +
Preference number: 5 (lower is better)
Translates to: FMHNQVCEAPLQTSECRNGHCSR*ASSSSF
Trigger: GAAGGAGGAGCTGGAAGCCAAGCGGCTGCAGTGCCC...ATTCCTGCACTCAGAAGTCTGCAGCGGTGCCTCACAAACTTGATTGTGCATAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CAA 90 bp ACAAGATCCCCAGTGATTTTTATGCACAATCAAGTTTGTGAGGCACCGCTGCAGGGGCACTGCAGCCGCTaGGCTTCCAGCTCCTCCTTC +
Preference number: 5 (lower is better)
Translates to: TRSPVIFMHNQVCEAPLQGHCSR*ASSSSF
Trigger: GAAGGAGGAGCTGGAAGCCAAGCGGCTGCAGTGCCC...CTGCAGCGGTGCCTCACAAACTTGATTGTGCATAAAAATCACTGGGGATCTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CAA 90 bp CCAGCAGCCTCCGCCTTACCTGGGAGCTTGTTAGAAATGCAGGATCTCCCAGATGGAGCCTCTTGGAGCTaGACTTATACACACGCACAC +
Preference number: 5 (lower is better)
Translates to: PAASALPGSLLEMQDLPDGASWS*TYTHAH
Trigger: GTGTGCGTGTGTATAAGTCAAGCTCCAAGAGGCTCC...ATCTGGGAGATCCTGCATTTCTAACAAGCTCCCAGGTAAGGCGGAGGCTGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CAA 90 bp ATGAGTAAGACCAGAACAATCCCTTTCCTCCGACAGTCCCACGTTTGCTTCCAGGAAGTCAGGAGCGTGTaGCTGGGTTCCTCACTCCAC +
Preference number: 5 (lower is better)
Translates to: MSKTRTIPFLRQSHVCFQEVRSV*LGSSLH
Trigger: GTGGAGTGAGGAACCCAGCAACACGCTCCTGACTTC...CTGGAAGCAAACGTGGGACTGTCGGAGGAAAGGGATTGTTCTGGTCTTACTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CAA 90 bp TCACATAACCAACACAATTTGCTAGGCCAAAGTCTTCACGGGCAATCCCTGGGGAGGAGGGCTGGGTGCTaGGAAGGAAAACCTAGGAGC +
Preference number: 5 (lower is better)
Translates to: SHNQHNLLGQSLHGQSLGRRAGC*EGKPRS
Trigger: GCTCCTAGGTTTTCCTTCCAAGCACCCAGCCCTCCT...CCCCAGGGATTGCCCGTGAAGACTTTGGCCTAGCAAATTGTGTTGGTTATGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CAA 90 bp TCAAAGAGCATGCCAGTGGCAGCTATCTGTGGCAGTTTTGGGAAAGTGAAAGGATGCAGGTTATCCCTCTaGGAGCAGGAGGGCTGGGTG +
Preference number: 5 (lower is better)
Translates to: SKSMPVAAICGSFGKVKGCRLSL*EQEGWV
Trigger: CACCCAGCCCTCCTGCTCCAAGAGGGATAACCTGCA...TCCTTTCACTTTCCCAAAACTGCCACAGATAGCTGCCACTGGCATGCTCTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CAA 90 bp CAACACTCACATAACCAACACAATTTGCTAGGCCAAAGTCTTCACGGGCAATCCTGGGCTCTGAACCCCTaGCAGGGAGGGGTGCAGGTT +
Preference number: 5 (lower is better)
Translates to: QHSHNQHNLLGQSLHGQSWALNP*QGGVQV
Trigger: AACCTGCACCCCTCCCTGCAAGGGGTTCAGAGCCCA...GGATTGCCCGTGAAGACTTTGGCCTAGCAAATTGTGTTGGTTATGTGAGTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CAA 90 bp CGCCTTACCTGGGAGCTTGTTAGAAATGCAGGATCTCCCAGATCTATTGAGTTATGGGCTCTGAACCCCTaGCAGGGAGGGGTGCAGGTT +
Preference number: 5 (lower is better)
Translates to: RLTWELVRNAGSPRSIELWALNP*QGGVQV
Trigger: AACCTGCACCCCTCCCTGCAAGGGGTTCAGAGCCCA...TAACTCAATAGATCTGGGAGATCCTGCATTTCTAACAAGCTCCCAGGTAAGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CAA 90 bp GTCCACAGGAGGTGGGGGCCAGCGATGGCTTCAGGGGTGATATTTCCAATATATCCGACAGTCCCACGTTaGCTTCCAGGAATCAAAGAG +
Preference number: 5 (lower is better)
Translates to: VHRRWGPAMASGVIFPIYPTVPR*LPGIKE
Trigger: CTCTTTGATTCCTGGAAGCAAACGTGGGACTGTCGG...ATATATTGGAAATATCACCCCTGAAGCCATCGCTGGCCCCCACCTCCTGTGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CAA 90 bp ACAAGATCCCCAGTGATTTTTATGCACAATCAAGTTTGTGAGGCACCGCTGCAGCTTGGCCTTCTCACCTaGCTGGGCACCACTCAGCCG +
Preference number: 5 (lower is better)
Translates to: TRSPVIFMHNQVCEAPLQLGLLT*LGTTQP
Trigger: CGGCTGAGTGGTGCCCAGCAAGGTGAGAAGGCCAAG...CTGCAGCGGTGCCTCACAAACTTGATTGTGCATAAAAATCACTGGGGATCTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CAA 90 bp GGCCAGTCCATAAAGGTGGCAGTGGGGTCTTCAAACCACTGTTTCTATTCCAGAAGCAGCTTCTTGGGCTaGATGAGCTCCGGATTCCAC +
Preference number: 5 (lower is better)
Translates to: GQSIKVAVGSSNHCFYSRSSFLG*MSSGFH
Trigger: GTGGAATCCGGAGCTCATCAAGCCCAAGAAGCTGCT...TCTGGAATAGAAACAGTGGTTTGAAGACCCCACTGCCACCTTTATGGACTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CAA 90 bp CCAGTTATGAGTAAGACCAGAACAATCCCTTTCCTCCGACAGTCCCACGTTTGCCCTAAACAGCTGTCTTaGTTAGTCCCCGCCCACCTG +
Preference number: 5 (lower is better)
Translates to: PVMSKTRTIPFLRQSHVCPKQLS*LVPAHL
Trigger: CAGGTGGGCGGGGACTAACAAAGACAGCTGTTTAGG...GCAAACGTGGGACTGTCGGAGGAAAGGGATTGTTCTGGTCTTACTCATAACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CAA 90 bp AACCACAGGTGGGGGAGTTCTCTGAGACCTAGGAGCTGGGGTGTACGGAGAAGCCATAACCAACACAATTaGCTAGGCCAAAGTCTTCAC +
Preference number: 5 (lower is better)
Translates to: NHRWGSSLRPRSWGVRRSHNQHN*LGQSLH
Trigger: GTGAAGACTTTGGCCTAGCAAATTGTGTTGGTTATG...GCTTCTCCGTACACCCCAGCTCCTAGGTCTCAGAGAACTCCCCCACCTGTGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CAA 90 bp TCTGCCCTGCCCTTCCTCCCCTCAGTGGCTTTGAAGGCAGGTGTCCTTGAAGCTTCCTCTTCAATTTCATaGGCCACACCTGATCACATA +
Preference number: 5 (lower is better)
Translates to: SALPFLPSVALKAGVLEASSSIS*ATPDHI
Trigger: TATGTGATCAGGTGTGGCCAATGAAATTGAAGAGGA...AGCTTCAAGGACACCTGCCTTCAAAGCCACTGAGGGGAGGAAGGGCAGGGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CAA 90 bp CAATTCTGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGGTGCCTGTGTCTTTTATaGGAAAAGCTTTCCCAGAAG +
Preference number: 5 (lower is better)
Translates to: QFCQRKLLCWALNPLQGGCLCLL*EKLSQK
Trigger: CTTCTGGGAAAGCTTTTCCAATAAAAGACACAGGCA...CCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCAGAATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CAA 90 bp TGCCAGAGAAAGCTCCTGTGCTGGGCTCTGAACCCCTTGCAGGGAGGGGTGCAGACCCATTTTGTCAGATaGATGAGGAATAAGAAACAC +
Preference number: 5 (lower is better)
Translates to: CQRKLLCWALNPLQGGVQTHFVR*MRNKKH
Trigger: GTGTTTCTTATTCCTCATCAATCTGACAAAATGGGT...CTGCACCCCTCCCTGCAAGGGGTTCAGAGCCCAGCACAGGAGCTTTCTCTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394481.5
CDS-3UTR CAA 90 bp GTGATCTTTATTTTAGGGATTGTGCATCTTCAGTGTAACCCTCACCTGGCAGACCTTGGCCTTCTCACCTaGCTGGGCACCACTCAGCCG +
Preference number: 5 (lower is better)
Translates to: VIFILGIVHLQCNPHLADLGLLT*LGTTQP
Trigger: CGGCTGAGTGGTGCCCAGCAAGGTGAGAAGGCCAAG...GTCTGCCAGGTGAGGGTTACACTGAAGATGCACAATCCCTAAAATAAAGATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649301.1
CDS-3UTR CAA 90 bp CACAGCATGGTCCTCACACCAGCAGCCTCCGCCTTACCTGGGAGCTTGTTAGAACATAACCAACACAATTaGCTAGGCCAAAGTCTTCAC +
Preference number: 5 (lower is better)
Translates to: HSMVLTPAASALPGSLLEHNQHN*LGQSLH
Trigger: GTGAAGACTTTGGCCTAGCAAATTGTGTTGGTTATG...TTCTAACAAGCTCCCAGGTAAGGCGGAGGCTGCTGGTGTGAGGACCATGCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CAA 90 bp GCCCAGGGAGGTGTTAGCCATGCCTGTGTCTTTTATTGGAAAAGCTTTCCCAGACCGACAGTCCCACGTTaGCTTCCAGGAATCAAAGAG +
Preference number: 5 (lower is better)
Translates to: AQGGVSHACVFYWKSFPRPTVPR*LPGIKE
Trigger: CTCTTTGATTCCTGGAAGCAAACGTGGGACTGTCGG...TCTGGGAAAGCTTTTCCAATAAAAGACACAGGCATGGCTAACACCTCCCTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS CCA 90 bp CGGCTGAGCCATTTCGTCTCTGCTTCTCATTTTCACTATGAAATCTaGCCTGAGGAGAGTATGTTTTCTTGCTGGGCACCACTCAGCCGA +
Preference number: 5 (lower is better)
Translates to: RLSHFVSASHFHYEI*PEESMFSCWAPLSR
Trigger: TCGGCTGAGTGGTGCCCAGCAAGAAAACATACTCTCCTCAGGCCAGATTTCATAGTGAAAATGAGAAGCAGAGACGAAATGGCTCAGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465970.1
CDS-3UTR CAA 90 bp CGCCTTACCTGGGAGCTTGTTAGAAATGCAGGATCTCCCAGATCTATTGAGTTAAGCAGCTTCTTGGGCTaGATGAGCTCCGGATTCCAC +
Preference number: 5 (lower is better)
Translates to: RLTWELVRNAGSPRSIELSSFLG*MSSGFH
Trigger: GTGGAATCCGGAGCTCATCAAGCCCAAGAAGCTGCT...TAACTCAATAGATCTGGGAGATCCTGCATTTCTAACAAGCTCCCAGGTAAGGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CAA 90 bp CAACACTCACATAACCAACACAATTTGCTAGGCCAAAGTCTTCACGGGCAATCCTCCTCCTTCTTCTTCTaGATGAGCTGGTTCCGCCGG +
Preference number: 5 (lower is better)
Translates to: QHSHNQHNLLGQSLHGQSSSFFF*MSWFRR
Trigger: CCGGCGGAACCAGCTCATCAAGAAGAAGAAGGAGGA...GGATTGCCCGTGAAGACTTTGGCCTAGCAAATTGTGTTGGTTATGTGAGTGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CAA 90 bp TCACATAACCAACACAATTTGCTAGGCCAAAGTCTTCACGGGCAATCCCTGGGGCTGAGACCCTCTGTCTaGCTTCTCTTCACATGTCTG +
Preference number: 5 (lower is better)
Translates to: SHNQHNLLGQSLHGQSLGLRPSV*LLFTCL
Trigger: CAGACATGTGAAGAGAAGCAAGACAGAGGGTCTCAG...CCCCAGGGATTGCCCGTGAAGACTTTGGCCTAGCAAATTGTGTTGGTTATGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CAA 90 bp CCAGCAGCCTCCGCCTTACCTGGGAGCTTGTTAGAAATGCAGGATCTCCCAGATTGCCTGTGTCTTTTATaGGAAAAGCTTTCCCAGAAG +
Preference number: 5 (lower is better)
Translates to: PAASALPGSLLEMQDLPDCLCLL*EKLSQK
Trigger: CTTCTGGGAAAGCTTTTCCAATAAAAGACACAGGCA...ATCTGGGAGATCCTGCATTTCTAACAAGCTCCCAGGTAAGGCGGAGGCTGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CAA 90 bp CCAGCAGCCTCCGCCTTACCTGGGAGCTTGTTAGAAATGCAGGATCTCCCAGATGTAAAGGAATTTCCCTaGTTTCTTATGGGAGGGTCA +
Preference number: 5 (lower is better)
Translates to: PAASALPGSLLEMQDLPDVKEFP*FLMGGS
Trigger: TGACCCTCCCATAAGAAACAAGGGAAATTCCTTTAC...ATCTGGGAGATCCTGCATTTCTAACAAGCTCCCAGGTAAGGCGGAGGCTGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394481.5
CDS-3UTR CAA 90 bp TCGGAGATTCCTGGTGGGAAGGCCTGGGCAGAACAGAAGGCTTGTCAAGTCAGAATTAATAATAGACCTTaGAAGATGCTTGGGGTCCGG +
Preference number: 5 (lower is better)
Translates to: SEIPGGKAWAEQKACQVRINNRP*KMLGVR
Trigger: CCGGACCCCAAGCATCTTCAAAGGTCTATTATTAAT...TCTGACTTGACAAGCCTTCTGTTCTGCCCAGGCCTTCCCACCAGGAATCTCCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474531.5
ENST00000649301.1
CDS-3UTR CAA 90 bp CTAGAATTGCATCGTAACAGTGTGGTCACACTGGTAAGAAATGCAGATTGGCAAGAAGTCAGGAGCGTGTaGCTGGGTTCCTCACTCCAC +
Preference number: 5 (lower is better)
Translates to: LELHRNSVVTLVRNADWQEVRSV*LGSSLH
Trigger: GTGGAGTGAGGAACCCAGCAACACGCTCCTGACTTC...TTGCCAATCTGCATTTCTTACCAGTGTGACCACACTGTTACGATGCAATTCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000649301.1
CDS-3UTR CAA 90 bp AAATGGGTGAATTCACTGGAGTTGGCCCAGCTAGGGGTTGGGTCTCAGGTGACACATAACCAACACAATTaGCTAGGCCAAAGTCTTCAC +
Preference number: 5 (lower is better)
Translates to: KWVNSLELAQLGVGSQVTHNQHN*LGQSLH
Trigger: GTGAAGACTTTGGCCTAGCAAATTGTGTTGGTTATG...TGTCACCTGAGACCCAACCCCTAGCTGGGCCAACTCCAGTGAATTCACCCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CAA 90 bp TTTATGCACAATCAAGTTTGTGAGGCACCGCTGCAGACTTCTGAGTGCAGGAATCCGACAGTCCCACGTTaGCTTCCAGGAATCAAAGAG +
Preference number: 5 (lower is better)
Translates to: FMHNQVCEAPLQTSECRNPTVPR*LPGIKE
Trigger: CTCTTTGATTCCTGGAAGCAAACGTGGGACTGTCGG...ATTCCTGCACTCAGAAGTCTGCAGCGGTGCCTCACAAACTTGATTGTGCATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CAA 90 bp GAAAAATGGGTGAATTCACTGGAGTTGGCCCAGCTAGGGGTTGGGTCTCAGGTGTCCTCTTCAATTTCATaGGCCACACCTGATCACATA +
Preference number: 5 (lower is better)
Translates to: EKWVNSLELAQLGVGSQVSSSIS*ATPDHI
Trigger: TATGTGATCAGGTGTGGCCAATGAAATTGAAGAGGA...CACCTGAGACCCAACCCCTAGCTGGGCCAACTCCAGTGAATTCACCCATTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CAA 90 bp GCTTTGAAGGCAGGTGTCCTTGAAGCTAAGCTCTGCTGGCTGCAGGTAAAACCATACATGGCGGCCTTATaGTCTAACTCTATCCACAGT +
Preference number: 5 (lower is better)
Translates to: ALKAGVLEAKLCWLQVKPYMAAL*SNSIHS
Trigger: ACTGTGGATAGAGTTAGACAATAAGGCCGCCATGTA...TGGTTTTACCTGCAGCCAGCAGAGCTTAGCTTCAAGGACACCTGCCTTCAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CAA 90 bp TTCCCCATCTCTAAAATGGGAATGCCACCTGGCTCACAAGACAGTTATAAGAATTCCTCCTTCTTCTTCTaGATGAGCTGGTTCCGCCGG +
Preference number: 5 (lower is better)
Translates to: FPISKMGMPPGSQDSYKNSSFFF*MSWFRR
Trigger: CCGGCGGAACCAGCTCATCAAGAAGAAGAAGGAGGA...ATTCTTATAACTGTCTTGTGAGCCAGGTGGCATTCCCATTTTAGAGATGGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464064.5
CDS-3UTR CAA 90 bp CCAGTTATGAGTAAGACCAGAACAATCCCTTTCCTCCGACAGTCCCACGTTTGCACATTCAGGAGCCTCTaGGAGCTTGACTTATACACA +
Preference number: 5 (lower is better)
Translates to: PVMSKTRTIPFLRQSHVCTFRSL*ELDLYT
Trigger: TGTGTATAAGTCAAGCTCCAAGAGGCTCCTGAATGT...GCAAACGTGGGACTGTCGGAGGAAAGGGATTGTTCTGGTCTTACTCATAACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CAA 90 bp CCAGTTATGAGTAAGACCAGAACAATCCCTTTCCTCCGACAGTCCCACGTTTGCTACATGGCGGCCTTATaGTCTAACTCTATCCACAGT +
Preference number: 5 (lower is better)
Translates to: PVMSKTRTIPFLRQSHVCYMAAL*SNSIHS
Trigger: ACTGTGGATAGAGTTAGACAATAAGGCCGCCATGTA...GCAAACGTGGGACTGTCGGAGGAAAGGGATTGTTCTGGTCTTACTCATAACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394481.5
ENST00000649301.1
CDS TCA 90 bp ACGGCCACTTCCACGATGCGGAACATCATGTCCAAGCCACACGCTTaGGAGGCACAAATAAATACCCATTTTGTCAGATTGATGAGGAAT +
Preference number: 5 (lower is better)
Translates to: TATSTMRNIMSKPHA*EAQINTHFVRLMRN
Trigger: ATTCCTCATCAATCTGACAAAATGGGTATTTATTTGTGCCTCTCAAGCGTGTGGCTTGGACATGATGTTCCGCATCGTGGAAGTGGCCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394481.5
CDS-3UTR CAA 90 bp CAGGAATCAAAGAGCATGCCAGTGGCAGCTATCTGTGGCAGTTTTGGGAAAGTGTCCTCTTCAATTTCATaGGCCACACCTGATCACATA +
Preference number: 5 (lower is better)
Translates to: QESKSMPVAAICGSFGKVSSSIS*ATPDHI
Trigger: TATGTGATCAGGTGTGGCCAATGAAATTGAAGAGGA...CACTTTCCCAAAACTGCCACAGATAGCTGCCACTGGCATGCTCTTTGATTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CAA 90 bp CAGGAATCAAAGAGCATGCCAGTGGCAGCTATCTGTGGCAGTTTTGGGAAAGTGTGCCTGTGTCTTTTATaGGAAAAGCTTTCCCAGAAG +
Preference number: 5 (lower is better)
Translates to: QESKSMPVAAICGSFGKVCLCLL*EKLSQK
Trigger: CTTCTGGGAAAGCTTTTCCAATAAAAGACACAGGCA...CACTTTCCCAAAACTGCCACAGATAGCTGCCACTGGCATGCTCTTTGATTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CAA 90 bp ACAAGATCCCCAGTGATTTTTATGCACAATCAAGTTTGTGAGGCACCGCTGCAGACATTCAGGAGCCTCTaGGAGCTTGACTTATACACA +
Preference number: 5 (lower is better)
Translates to: TRSPVIFMHNQVCEAPLQTFRSL*ELDLYT
Trigger: TGTGTATAAGTCAAGCTCCAAGAGGCTCCTGAATGT...CTGCAGCGGTGCCTCACAAACTTGATTGTGCATAAAAATCACTGGGGATCTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CAA 90 bp CTAGAATTGCATCGTAACAGTGTGGTCACACTGGTAAGAAATGCAGATTGGCAACTGAGACCCTCTGTCTaGCTTCTCTTCACATGTCTG +
Preference number: 5 (lower is better)
Translates to: LELHRNSVVTLVRNADWQLRPSV*LLFTCL
Trigger: CAGACATGTGAAGAGAAGCAAGACAGAGGGTCTCAG...TTGCCAATCTGCATTTCTTACCAGTGTGACCACACTGTTACGATGCAATTCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CAA 90 bp ACACTGGTAAGAAATGCAGATTGGCAATCATGTACATCTCTGATTAAAACAACATGGAGGGCGTGGTGCTaGAGGTCCCTTCTACCTCTG +
Preference number: 5 (lower is better)
Translates to: TLVRNADWQSCTSLIKTTWRAWC*RSLLPL
Trigger: CAGAGGTAGAAGGGACCTCAAGCACCACGCCCTCCA...TGTTGTTTTAATCAGAGATGTACATGATTGCCAATCTGCATTTCTTACCAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000649301.1
CDS TCA 90 bp ACAACTGTTCAGCTTTTCATTTTCTTCACATCAAAGAGGAGAGCATaGAATTCAGAGACTGCTGTGTCCTTCTCAGGTCGAGTCCTTGGG +
Preference number: 5 (lower is better)
Translates to: TTVQLFIFFTSKRRA*NSETAVSFSGRVLG
Trigger: CCCAAGGACTCGACCTGAGAAGGACACAGCAGTCTCTGAATTTCATGCTCTCCTCTTTGATGTGAAGAAAATGAAAAGCTGAACAGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394481.5
ENST00000649301.1
CDS-3UTR CAA 90 bp TTTATGCACAATCAAGTTTGTGAGGCACCGCTGCAGACTTCTGAGTGCAGGAATCATAACCAACACAATTaGCTAGGCCAAAGTCTTCAC +
Preference number: 5 (lower is better)
Translates to: FMHNQVCEAPLQTSECRNHNQHN*LGQSLH
Trigger: GTGAAGACTTTGGCCTAGCAAATTGTGTTGGTTATG...ATTCCTGCACTCAGAAGTCTGCAGCGGTGCCTCACAAACTTGATTGTGCATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS CCA 90 bp GTATCAATAAAAAGGAACTGTTACTATAGTAACAGATATTCCACTTaGTGCACGGCCACTTCCACGATGCGGAACATCATGTCCAAGCCA +
Preference number: 5 (lower is better)
Translates to: VSIKRNCYYSNRYST*CTATSTMRNIMSKP
Trigger: TGGCTTGGACATGATGTTCCGCATCGTGGAAGTGGCCGTGCACCAAGTGGAATATCTGTTACTATAGTAACAGTTCCTTTTTATTGATAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394481.5
CDS-3UTR CAA 90 bp ACACTGGTAAGAAATGCAGATTGGCAATCATGTACATCTCTGATTAAAACAACAGAAGGATACCTGGGGTaGCAGAAGTGGGGTGGGAAT +
Preference number: 5 (lower is better)
Translates to: TLVRNADWQSCTSLIKTTEGYLG*QKWGGN
Trigger: ATTCCCACCCCACTTCTGCAACCCCAGGTATCCTTC...TGTTGTTTTAATCAGAGATGTACATGATTGCCAATCTGCATTTCTTACCAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000474531.5
ENST00000649301.1
CDS CCA 72 bp CGGCCGACCGGAGCAGCACAGCCCGGTAGAGCCCGGTaGCATCGGAGGGCCCCCGGGCCCACTCGCCCAGCC +
Preference number: 6 (lower is better)
Translates to: RPTGAAQPGRAR*HRRAPGPTRPA
Trigger: GGCTGGGCGAGTGGGCCCGGGGGCCCTCCGATGCCACCGGGCTCTACCGGGCTGTGCTGCTCCGGTCGGCCG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447756.2
CDS CAA 90 bp GCTCAGGCGCGGCGGGTGACCTCTGCCTGGCCCAGCGGGCAGGACTaGGCCTTCTCACCTTGCTGGGCACCACTCAGCCGACAGGGCCAG +
Preference number: 6 (lower is better)
Translates to: AQARRVTSAWPSGQD*AFSPCWAPLSRQGQ
Trigger: CTGGCCCTGTCGGCTGAGTGGTGCCCAGCAAGGTGAGAAGGCCAAGTCCTGCCCGCTGGGCCAGGCAGAGGTCACCCGCCGCGCCTGAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474531.5
ENST00000649301.1
CDS CAA 90 bp GGTGACCTCTGCCTGGCCCAGCGGGCAGGACTTGGCCTTCTCACCTaGCTGGGCACCACTCAGCCGACAGGGCCAGACGGTGGAGGCCGT +
Preference number: 6 (lower is better)
Translates to: GDLCLAQRAGLGLLT*LGTTQPTGPDGGGR
Trigger: ACGGCCTCCACCGTCTGGCCCTGTCGGCTGAGTGGTGCCCAGCAAGGTGAGAAGGCCAAGTCCTGCCCGCTGGGCCAGGCAGAGGTCACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474531.5
ENST00000649301.1
CDS GCA 72 bp GCCTGGCCCAGCGGGCAGGACTTGGCCTTCTCACCTTaGTGGGCACCACTCAGCCGACAGGGCCAGACGGTG +
Preference number: 6 (lower is better)
Translates to: AWPSGQDLAFSP*WAPLSRQGQTV
Trigger: CACCGTCTGGCCCTGTCGGCTGAGTGGTGCCCAGCAAGGTGAGAAGGCCAAGTCCTGCCCGCTGGGCCAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474531.5
ENST00000649301.1
CDS GCA 72 bp TCACACACCGGTAGCTCAGGCGCGGCGGGTGACCTCTaGCTGGCCCAGCGGGCAGGACTTGGCCTTCTCACC +
Preference number: 6 (lower is better)
Translates to: SHTGSSGAAGDL*LAQRAGLGLLT
Trigger: GGTGAGAAGGCCAAGTCCTGCCCGCTGGGCCAGGCAGAGGTCACCCGCCGCGCCTGAGCTACCGGTGTGTGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000474531.5
ENST00000497310.1
ENST00000649301.1
CDS CCA 72 bp CGGGCCATCAGGCCCCCAATGTCTGCCCGCTCCCTCTaGATCTCCGAGTACATGGCGGCCGACCGGAGCAGC +
Preference number: 6 (lower is better)
Translates to: RAIRPPMSARSL*ISEYMAADRSS
Trigger: GCTGCTCCGGTCGGCCGCCATGTACTCGGAGATCCAGAGGGAGCGGGCAGACATTGGGGGCCTGATGGCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447756.2
CDS CCA 72 bp GTGGCCACAGCAGAGCTCCTCCCTGGAGGACAGCCCTaGAGGATGCGTGGTCCCTGCTGGGTGCCCATCACC +
Preference number: 6 (lower is better)
Translates to: VATAELLPGGQP*RMRGPCWVPIT
Trigger: GGTGATGGGCACCCAGCAGGGACCACGCATCCTCCAGGGCTGTCCTCCAGGGAGGAGCTCTGCTGTGGCCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464064.5
CDS CCA 72 bp TGGCCCAGCGGGCAGGACTTGGCCTTCTCACCTTGCTaGGCACCACTCAGCCGACAGGGCCAGACGGTGGAG +
Preference number: 6 (lower is better)
Translates to: WPSGQDLAFSPC*APLSRQGQTVE
Trigger: CTCCACCGTCTGGCCCTGTCGGCTGAGTGGTGCCCAGCAAGGTGAGAAGGCCAAGTCCTGCCCGCTGGGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474531.5
ENST00000649301.1
CDS CAA 72 bp TGCCTGGCCCAGCGGGCAGGACTTGGCCTTCTCACCTaGCTGGGCACCACTCAGCCGACAGGGCCAGACGGT +
Preference number: 6 (lower is better)
Translates to: CLAQRAGLGLLT*LGTTQPTGPDG
Trigger: ACCGTCTGGCCCTGTCGGCTGAGTGGTGCCCAGCAAGGTGAGAAGGCCAAGTCCTGCCCGCTGGGCCAGGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474531.5
ENST00000649301.1
CDS CAA 72 bp CCTAAGCCCGGAGCGCCTCAGACAGGCTTAGGGCGATaGATCCTGACAGAGGGGCCAGTGTCCCCAGGCGGC +
Preference number: 6 (lower is better)
Translates to: PKPGAPQTGLGR*ILTEGPVSPGG
Trigger: GCCGCCTGGGGACACTGGCCCCTCTGTCAGGATCAATCGCCCTAAGCCTGTCTGAGGCGCTCCGGGCTTAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000474531.5
ENST00000497310.1
ENST00000649301.1
CDS GCA 72 bp ATGAGCTGGTTCCGCCGGCGGTGCTCTAGGACACGCTaGAGCTCTGGCTTGCTGTCCACACCAAGGCCCCTT +
Preference number: 6 (lower is better)
Translates to: MSWFRRRCSRTR*SSGLLSTPRPL
Trigger: AAGGGGCCTTGGTGTGGACAGCAAGCCAGAGCTGCAGCGTGTCCTAGAGCACCGCCGGCGGAACCAGCTCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000465970.1
ENST00000474531.5
ENST00000649301.1
CDS GCA 72 bp TCTGTATTCTGGCCGGGCCATCAGGCCCCCAATGTCTaGCCGCTCCCTCTGGATCTCCGAGTACATGGCGGC +
Preference number: 6 (lower is better)
Translates to: SVFWPGHQAPNV*PLPLDLRVHGG
Trigger: GCCGCCATGTACTCGGAGATCCAGAGGGAGCGGGCAGACATTGGGGGCCTGATGGCCCGGCCAGAATACAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000394481.5
ENST00000447756.2
ENST00000465970.1
ENST00000474531.5
ENST00000649301.1
CDS CCA 72 bp CGGGCCATCAGGCCCCCAATGTCTGCCCGCTCCCTCTaGATCTCCGAGTACATGGCGGTTCTCAGGTCGAGT +
Preference number: 6 (lower is better)
Translates to: RAIRPPMSARSL*ISEYMAVLRSS
Trigger: ACTCGACCTGAGAACCGCCATGTACTCGGAGATCCAGAGGGAGCGGGCAGACATTGGGGGCCTGATGGCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360997.7
ENST00000464064.5
CDS CCA 72 bp CGGGCCATCAGGCCCCCAATGTCTGCCCGCTCCCTCTaGATCTCCGAGTACATGGCGGCTGAGCCATTTCGT +
Preference number: 6 (lower is better)
Translates to: RAIRPPMSARSL*ISEYMAAEPFR
Trigger: ACGAAATGGCTCAGCCGCCATGTACTCGGAGATCCAGAGGGAGCGGGCAGACATTGGGGGCCTGATGGCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465970.1
ENST00000474531.5
CDS CAA 72 bp CGCCGGCGGTGCTCTAGGACACGCTGCAGCTCTGGCTaGCTGTCCACACCAAGGCCCCTTCTGTGGTTCATG +
Preference number: 6 (lower is better)
Translates to: RRRCSRTRCSSG*LSTPRPLLWFM
Trigger: CATGAACCACAGAAGGGGCCTTGGTGTGGACAGCAAGCCAGAGCTGCAGCGTGTCCTAGAGCACCGCCGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000465970.1
ENST00000474531.5
ENST00000649301.1
CDS CAA 90 bp ACAGCTGCTCCTAAGCCCGGAGCGCCTCAGACAGGCTTAGGGCGATaGATCCTGACAGAGGGGCCAGTGTCCCCAGGCGGCTTCTATGCC +
Preference number: 6 (lower is better)
Translates to: TAAPKPGAPQTGLGR*ILTEGPVSPGGFYA
Trigger: GGCATAGAAGCCGCCTGGGGACACTGGCCCCTCTGTCAGGATCAATCGCCCTAAGCCTGTCTGAGGCGCTCCGGGCTTAGGAGCAGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000474531.5
ENST00000497310.1
ENST00000649301.1
CDS GCA 72 bp TCTGTATTCTGGCCGGGCCATCAGGCCCCCAATGTCTaGCCGCTCCCTCTGGATCTCCGAGTACATGGCGGT +
Preference number: 6 (lower is better)
Translates to: SVFWPGHQAPNV*PLPLDLRVHGG
Trigger: ACCGCCATGTACTCGGAGATCCAGAGGGAGCGGGCAGACATTGGGGGCCTGATGGCCCGGCCAGAATACAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360997.7
ENST00000464064.5
CDS CCA 72 bp GGGCTTGATGAGCTCCGGATTCCACTCTCTGTATTCTaGCCGGGCCATCAGGCCCCCAATGTCTGCCCGCTC +
Preference number: 6 (lower is better)
Translates to: GLDELRIPLSVF*PGHQAPNVCPL
Trigger: GAGCGGGCAGACATTGGGGGCCTGATGGCCCGGCCAGAATACAGAGAGTGGAATCCGGAGCTCATCAAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000465970.1
ENST00000474531.5
ENST00000649301.1
CDS CCA 72 bp CGGGCCATCAGGCCCCCAATGTCTGCCCGCTCCCTCTaGATCTCCGAGTACATGGCGGCCTTATTGTCTAAC +
Preference number: 6 (lower is better)
Translates to: RAIRPPMSARSL*ISEYMAALLSN
Trigger: GTTAGACAATAAGGCCGCCATGTACTCGGAGATCCAGAGGGAGCGGGCAGACATTGGGGGCCTGATGGCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394481.5
ENST00000649301.1
CDS CAA 72 bp CAGGTCGAGTCCTTGGGAAGGGAAGTCAGGAGCGTGTaGCTGGGTTCCTCACTCCACCGGGAAGTCCCAGAC +
Preference number: 6 (lower is better)
Translates to: QVESLGREVRSV*LGSSLHREVPD
Trigger: GTCTGGGACTTCCCGGTGGAGTGAGGAACCCAGCAACACGCTCCTGACTTCCCTTCCCAAGGACTCGACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000649301.1
CDS GCA 72 bp TCCTTCTTCTTCTTGATGAGCTGGTTCCGCCGGCGGTaGTCTAGGACACGCTGCAGCTCTGGCTTGCTGTCC +
Preference number: 6 (lower is better)
Translates to: SFFFLMSWFRRR*SRTRCSSGLLS
Trigger: GGACAGCAAGCCAGAGCTGCAGCGTGTCCTAGAGCACCGCCGGCGGAACCAGCTCATCAAGAAGAAGAAGGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000465970.1
ENST00000474531.5
ENST00000649301.1
CDS CCA 72 bp TCGAGTCCTTGGGAAGGGAAGTCAGGAGCGTGTTGCTaGGTTCCTCACTCCACCGGGAAGTCCCAGACTAGC +
Preference number: 6 (lower is better)
Translates to: SSPWEGKSGACC*VPHSTGKSQTS
Trigger: GCTAGTCTGGGACTTCCCGGTGGAGTGAGGAACCCAGCAACACGCTCCTGACTTCCCTTCCCAAGGACTCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000464064.5
ENST00000649301.1
CDS CCA 72 bp AGGAGGGCTGCCTCTAGAGGGCGGTTCTTAAACCCCTaGGAACGGAGGCTGCTGAGCCATTTCGTCTCTGCT +
Preference number: 6 (lower is better)
Translates to: RRAASRGRFLNP*ERRLLSHFVSA
Trigger: AGCAGAGACGAAATGGCTCAGCAGCCTCCGTTCCCAGGGGTTTAAGAACCGCCCTCTAGAGGCAGCCCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649301.1
CDS TCA 72 bp CCAGTGCTGAGGGATGGGGTTCCCAGCAGATGCAGGTaGAGAGATGGCAGGTATAGGTCCATCCCAGCCACT +
Preference number: 6 (lower is better)
Translates to: PVLRDGVPSRCR*RDGRYRSIPAT
Trigger: AGTGGCTGGGATGGACCTATACCTGCCATCTCTTCACCTGCATCTGCTGGGAACCCCATCCCTCAGCACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497310.1
CDS CAA 72 bp GATCTCCGAGTACATGGCGGTTCTCAGGTCGAGTCCTaGGGAAGGGAAGTCAGGAGCGTGTTGCTGGGTTCC +
Preference number: 6 (lower is better)
Translates to: DLRVHGGSQVES*GREVRSVLLGS
Trigger: GGAACCCAGCAACACGCTCCTGACTTCCCTTCCCAAGGACTCGACCTGAGAACCGCCATGTACTCGGAGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360997.7
ENST00000464064.5
CDS CCA 72 bp ATCTCCGAGTACATGGCGGTTCTCAGGTCGAGTCCTTaGGAAGGGAAGTCAGGAGCGTGTTGCTGGGTTCCT +
Preference number: 6 (lower is better)
Translates to: ISEYMAVLRSSP*EGKSGACCWVP
Trigger: AGGAACCCAGCAACACGCTCCTGACTTCCCTTCCCAAGGACTCGACCTGAGAACCGCCATGTACTCGGAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360997.7
ENST00000464064.5
CDS CAA 72 bp CGAGAGGCCTTCACGGGGTTCAGCAGCTTCTTGGGCTaGATGAGCTCCGGATTCCACTCTCTGTATTCTGGC +
Preference number: 6 (lower is better)
Translates to: REAFTGFSSFLG*MSSGFHSLYSG
Trigger: GCCAGAATACAGAGAGTGGAATCCGGAGCTCATCAAGCCCAAGAAGCTGCTGAACCCCGTGAAGGCCTCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360997.7
ENST00000394481.5
ENST00000447756.2
ENST00000464064.5
ENST00000465970.1
ENST00000474531.5
ENST00000649301.1
CDS TCA 72 bp GCCAGGAGTGGACTCTTAGTCCAGTGCTCTGTCTGCTaGTCCTCTTCCCTCTTACTAGCTGTGGCCACAGCA +
Preference number: 6 (lower is better)
Translates to: ARSGLLVQCSVC*SSSLLLAVATA
Trigger: TGCTGTGGCCACAGCTAGTAAGAGGGAAGAGGATCAGCAGACAGAGCACTGGACTAAGAGTCCACTCCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464064.5
CDS CCA 72 bp TTCAGAGACTGCTGTGTCCTTCTCAGGTCGAGTCCTTaGGAAGGGAAGTCAGGAGCGTGTTGCTGGGTTCCT +
Preference number: 6 (lower is better)
Translates to: FRDCCVLLRSSP*EGKSGACCWVP
Trigger: AGGAACCCAGCAACACGCTCCTGACTTCCCTTCCCAAGGACTCGACCTGAGAAGGACACAGCAGTCTCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394481.5
ENST00000649301.1
CDS CCA 72 bp GTCCATCCCAGCCACTCTCTTCTGGCTGTGTGGTCTTaGGCAAATGGCGTAACGTGTCTGGGCCTTCATTTC +
Preference number: 6 (lower is better)
Translates to: VHPSHSLLAVWS*ANGVTCLGLHF
Trigger: GAAATGAAGGCCCAGACACGTTACGCCATTTGCCCAAGACCACACAGCCAGAAGAGAGTGGCTGGGATGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497310.1
CDS CAA 72 bp GGTCCATCCCAGCCACTCTCTTCTGGCTGTGTGGTCTaGGGCAAATGGCGTAACGTGTCTGGGCCTTCATTT +
Preference number: 6 (lower is better)
Translates to: GPSQPLSSGCVV*GKWRNVSGPSF
Trigger: AAATGAAGGCCCAGACACGTTACGCCATTTGCCCAAGACCACACAGCCAGAAGAGAGTGGCTGGGATGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497310.1
CDS GCA 72 bp ACAGATATTCCACTTGGTGCACGGCCACTTCCACGATaGGGAACATCATGTCCAAGCCACACGCTTGAGAGG +
Preference number: 6 (lower is better)
Translates to: TDIPLGARPLPR*GTSCPSHTLER
Trigger: CCTCTCAAGCGTGTGGCTTGGACATGATGTTCCGCATCGTGGAAGTGGCCGTGCACCAAGTGGAATATCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394481.5
CDS GCA 72 bp CATGCATCTCTTTCCCCTGGACACCTTCCTGAGATCTaGAGGGACTCTTGGCTCTCAGAGGGGACTTTCTCA +
Preference number: 6 (lower is better)
Translates to: HASLSPGHLPEI*RDSWLSEGTFS
Trigger: TGAGAAAGTCCCCTCTGAGAGCCAAGAGTCCCTGCAGATCTCAGGAAGGTGTCCAGGGGAAAGAGATGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497310.1
CDS GCA 72 bp GTTCTTAAACCCCTGGGAACGGAGGCTGCTGAAATGTaGCAACAAGTGAGACAGCCTTTGCATTCCTGTTTA +
Preference number: 6 (lower is better)
Translates to: VLKPLGTEAAEM*QQVRQPLHSCL
Trigger: TAAACAGGAATGCAAAGGCTGTCTCACTTGTTGGCACATTTCAGCAGCCTCCGTTCCCAGGGGTTTAAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394481.5
CDS CAA 90 bp CACGGCCACTTCCACGATGCGGAACATCATGTCCAAGCCACACGCTaGAGAGGCACAAATAAATACCCATTTTGTCAGATTGATGAGGAA +
Preference number: 6 (lower is better)
Translates to: HGHFHDAEHHVQATR*RGTNKYPFCQIDEE
Trigger: TTCCTCATCAATCTGACAAAATGGGTATTTATTTGTGCCTCTCAAGCGTGTGGCTTGGACATGATGTTCCGCATCGTGGAAGTGGCCGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394481.5
CDS TCA 72 bp TCCACGATGCGGAACATCATGTCCAAGCCACACGCTTaGGAGGCACAAATAAATACCCATTTTGTCAGATTG +
Preference number: 6 (lower is better)
Translates to: STMRNIMSKPHA*EAQINTHFVRL
Trigger: CAATCTGACAAAATGGGTATTTATTTGTGCCTCTCAAGCGTGTGGCTTGGACATGATGTTCCGCATCGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394481.5
CDS CCA 72 bp AAAAGGAACTGTTACTATAGTAACAGATATTCCACTTaGTGCACGGCCACTTCCACGATGCGGAACATCATG +
Preference number: 6 (lower is better)
Translates to: KRNCYYSNRYST*CTATSTMRNIM
Trigger: CATGATGTTCCGCATCGTGGAAGTGGCCGTGCACCAAGTGGAATATCTGTTACTATAGTAACAGTTCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394481.5
CDS CAA 72 bp TTCCACGATGCGGAACATCATGTCCAAGCCACACGCTaGAGAGGCACAAATAAATACCCATTTTGTCAGATT +
Preference number: 6 (lower is better)
Translates to: FHDAEHHVQATR*RGTNKYPFCQI
Trigger: AATCTGACAAAATGGGTATTTATTTGTGCCTCTCAAGCGTGTGGCTTGGACATGATGTTCCGCATCGTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394481.5