RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM104A (Homo sapiens)

Ensembl gene IDs: ENSG00000133193

Ensembl transcript IDs: ENST00000403627.7, ENST00000405159.7, ENST00000579872.1, ENST00000580032.1, ENST00000581110.1, ENST00000583024.1, ENST00000583178.5

Found 258 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGTCCTCTGACTAGAGCCATCGTGCTTCTCAGCTCCGCTTGTGTGTaGCGTGTGGACTCCGAGTGGCGTCGCGCGGAGGGCGAGTGGGCA +
Preference number: 1 (lower is better)
Translates to: SPLTRAIVLLSSACV*RVDSEWRRAEGEWA
Trigger: TGCCCACTCGCCCTCCGCGCGACGCCACTCGGAGTCCACACGGCACACACAAGCGGAGCTGAGAAGCACGATGGCTCTAGTCAGAGGACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR CCA 90 bp TGTGTGTGCCGTGTGGACTCCGAGTGGCGTCGCGCGGAGGGCGAGTaGGCAGGAGGGCTCAGGCCAACTCTAAGGCACTTTTCTCTACAT +
Preference number: 1 (lower is better)
Translates to: CVCRVDSEWRRAEGE*AGGLRPTLRHFSLH
Trigger: ATGTAGAGAAAAGTGCCTTAGAGTTGGCCTGAGCCCTCCTGCCCACTCGCCCTCCGCGCGACGCCACTCGGAGTCCACACGGCACACACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR TCA 90 bp GCTGTTCCGTGTCCTCTTCAAATCTGGACCGACAGCAAAGTCCTCTaGCTAGAGCCATCGTGCTTCTCAGCTCCGCTTGTGTGTGCCGTG +
Preference number: 1 (lower is better)
Translates to: AVPCPLQIWTDSKVL*LEPSCFSAPLVCAV
Trigger: CACGGCACACACAAGCGGAGCTGAGAAGCACGATGGCTCTAGTCAGAGGACTTTGCTGTCGGTCCAGATTTGAAGAGGACACGGAACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR TCA 90 bp GCATGGGCTATGTTGCAGCCTCTTCCAGAACAGTTTCCACTGCAGTaGTCTTTCAGTTCTGCCCACATTAGGTTAGCAGGCTGTGGAGAG +
Preference number: 1 (lower is better)
Translates to: AWAMLQPLPEQFPLQ*SFSSAHIRLAGCGE
Trigger: CTCTCCACAGCCTGCTAACCTAATGTGGGCAGAACTGAAAGATCACTGCAGTGGAAACTGTTCTGGAAGAGGCTGCAACATAGCCCATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR TCA 90 bp CAAAGAGTAGAGACTATTATTAGGGAGTGTGCTTCACTGACAGTCTaGATTGGATCTGATTGTTCTCCTGTTACACAGGAGAGAGTACTT +
Preference number: 1 (lower is better)
Translates to: QRVETIIRECASLTV*IGSDCSPVTQERVL
Trigger: AAGTACTCTCTCCTGTGTAACAGGAGAACAATCAGATCCAATTCAGACTGTCAGTGAAGCACACTCCCTAATAATAGTCTCTACTCTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR TCA 90 bp TCAGGTAGCTTACATTTTATCAGCGTTCAACAACACCTTAATTGTTaGCACTACAAGGTGGAATTGTCAATGAGATCATGTAAGCTGCTG +
Preference number: 1 (lower is better)
Translates to: SGSLHFISVQQHLNC*HYKVELSMRSCKLL
Trigger: CAGCAGCTTACATGATCTCATTGACAATTCCACCTTGTAGTGTCAACAATTAAGGTGTTGTTGAACGCTGATAAAATGTAAGCTACCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR TCA 90 bp ATAAATACTACCACATTATTTCTTCTAAAGGTGCCTCTGCTCATCTaGTTCTCAGCCACACCAATCTTTCCAGTTTCACTGATGGAATGT +
Preference number: 1 (lower is better)
Translates to: INTTTLFLLKVPLLI*FSATPIFPVSLMEC
Trigger: ACATTCCATCAGTGAAACTGGAAAGATTGGTGTGGCTGAGAATCAGATGAGCAGAGGCACCTTTAGAAGAAATAATGTGGTAGTATTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR-3UTR TCA 90 bp TTCTCAGCTCCGCTTGTGTGTGCCGTGTGGACTCCGAGTGGCGTCGCGCGGAGGGGGAGTGTGCTTCACTaGCAGTCTGAATTGGATCTG +
Preference number: 2 (lower is better)
Translates to: FSAPLVCAVWTPSGVARRGSVLH*QSELDL
Trigger: CAGATCCAATTCAGACTGTCAGTGAAGCACACTCCC...CCTCCGCGCGACGCCACTCGGAGTCCACACGGCACACACAAGCGGAGCTGAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR CAA 90 bp CCCCCGGCACGCTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTaGTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGCACCT +
Preference number: 2 (lower is better)
Translates to: PPARSTAGDPTVPGS*FRQLVSEEDNTSAP
Trigger: AGGTGCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGTGCCGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR-3UTR TCA 90 bp TCCGCTTGTGTGTGCCGTGTGGACTCCGAGTGGCGTCGCGCGGAGGGCGAGTGGAGTCTGAATTGGATCTaGTTGTTCTCCTGTTACACA +
Preference number: 2 (lower is better)
Translates to: SACVCRVDSEWRRAEGEWSLNWI*LFSCYT
Trigger: TGTGTAACAGGAGAACAATCAGATCCAATTCAGACT...CCACTCGCCCTCCGCGCGACGCCACTCGGAGTCCACACGGCACACACAAGCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR-3UTR TCA 90 bp TTCTCAGCTCCGCTTGTGTGTGCCGTGTGGACTCCGAGTGGCGTCGCGCGGAGGGATCATGTAAGCTGCTaGCTGACCAAGTTTGTAGGA +
Preference number: 2 (lower is better)
Translates to: FSAPLVCAVWTPSGVARRDHVSC*LTKFVG
Trigger: TCCTACAAACTTGGTCAGTCAGCAGCTTACATGATC...CCTCCGCGCGACGCCACTCGGAGTCCACACGGCACACACAAGCGGAGCTGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR-3UTR TCA 90 bp CCGGCACGCTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGTTTCCTACTAAAGTCTaGGGTGCAGACTCTGGTGGA +
Preference number: 2 (lower is better)
Translates to: PARSTAGDPTVPGSLFRQFPTKV*GADSGG
Trigger: TCCACCAGAGTCTGCACCTCAGACTTTAGTAGGAAA...CTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGTGCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR-3UTR TCA 90 bp TTCTCAGCTCCGCTTGTGTGTGCCGTGTGGACTCCGAGTGGCGTCGCGCGGAGGAGTCTGAATTGGATCTaGTTGTTCTCCTGTTACACA +
Preference number: 2 (lower is better)
Translates to: FSAPLVCAVWTPSGVARRSLNWI*LFSCYT
Trigger: TGTGTAACAGGAGAACAATCAGATCCAATTCAGACT...CCTCCGCGCGACGCCACTCGGAGTCCACACGGCACACACAAGCGGAGCTGAGAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR-3UTR TCA 90 bp CTGACTAGAGCCATCGTGCTTCTCAGCTCCGCTTGTGTGTGCCGTGTGGACTCCCAGACAGCTTGTCAGTaGAGAAGACAACACGTCTGC +
Preference number: 2 (lower is better)
Translates to: LTRAIVLLSSACVCRVDSQTACQ*RRQHVC
Trigger: GCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTG...GGAGTCCACACGGCACACACAAGCGGAGCTGAGAAGCACGATGGCTCTAGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR-3UTR TCA 90 bp GCAGCCTCTTCCAGAACAGTTTCCACTGCAGTGATCTTTCAGTTCTGCCCACATACGCTCCACAGCTGGTaGCCCGACAGTTCCTGGCTC +
Preference number: 2 (lower is better)
Translates to: AASSRTVSTAVIFQFCPHTLHSW*PDSSWL
Trigger: GAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGT...ATGTGGGCAGAACTGAAAGATCACTGCAGTGGAAACTGTTCTGGAAGAGGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR-3UTR TCA 90 bp CTGACTAGAGCCATCGTGCTTCTCAGCTCCGCTTGTGTGTGCCGTGTGGACTCCGCTTCAAAGCCCCTTTaGAATTGCAATAGTGCAGCA +
Preference number: 2 (lower is better)
Translates to: LTRAIVLLSSACVCRVDSASKPL*NCNSAA
Trigger: TGCTGCACTATTGCAATTTCAAAGGGGCTTTGAAGC...GGAGTCCACACGGCACACACAAGCGGAGCTGAGAAGCACGATGGCTCTAGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR-3UTR TCA 90 bp CCTCTGACTAGAGCCATCGTGCTTCTCAGCTCCGCTTGTGTGTGCCGTGTGGACGATCATGTAAGCTGCTaGCTGACCAAGTTTGTAGGA +
Preference number: 2 (lower is better)
Translates to: PLTRAIVLLSSACVCRVDDHVSC*LTKFVG
Trigger: TCCTACAAACTTGGTCAGTCAGCAGCTTACATGATC...GTCCACACGGCACACACAAGCGGAGCTGAGAAGCACGATGGCTCTAGTCAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR-3UTR TCA 90 bp CCGGCACGCTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGATTTGGAAATCAGTCTaGATGGGACATACTATGGAT +
Preference number: 2 (lower is better)
Translates to: PARSTAGDPTVPGSLFRQIWKSV*MGHTMD
Trigger: ATCCATAGTATGTCCCATTCAGACTGATTTCCAAAT...CTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGTGCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR-3UTR TCA 90 bp ACCATCCAGTCCCTAAGCATGGGCTATGTTGCAGCCTCTTCCAGAACAGTTTCCGTGCCTCTGCTCATCTaGTTCTCAGCCACACCAATC +
Preference number: 2 (lower is better)
Translates to: TIQSLSMGYVAASSRTVSVPLLI*FSATPI
Trigger: GATTGGTGTGGCTGAGAATCAGATGAGCAGAGGCAC...GGAAACTGTTCTGGAAGAGGCTGCAACATAGCCCATGCTTAGGGACTGGATGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR CAA 90 bp CCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTaGTCAGTGAAGAAGACAACACGTCTGCACCTTCATTATTCAAAC +
Preference number: 2 (lower is better)
Translates to: PQLVTRQFLAPCSDS*SVKKTTRLHLHYSN
Trigger: GTTTGAATAATGAAGGTGCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR-3UTR TCA 90 bp ACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACAGGGAGTGTGCTTCACTaGCAGTCTGAATTGGATCTG +
Preference number: 2 (lower is better)
Translates to: TRQFLAPCSDSLSVKKTTGSVLH*QSELDL
Trigger: CAGATCCAATTCAGACTGTCAGTGAAGCACACTCCC...TGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR-3UTR CCA 90 bp ACCATCCAGTCCCTAAGCATGGGCTATGTTGCAGCCTCTTCCAGAACAGTTTCCTGTCCTCTTCAAATCTaGACCGACAGCAAAGTCCTC +
Preference number: 2 (lower is better)
Translates to: TIQSLSMGYVAASSRTVSCPLQI*TDSKVL
Trigger: GAGGACTTTGCTGTCGGTCCAGATTTGAAGAGGACA...GGAAACTGTTCTGGAAGAGGCTGCAACATAGCCCATGCTTAGGGACTGGATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR-3UTR GCA 90 bp CCTCTGACTAGAGCCATCGTGCTTCTCAGCTCCGCTTGTGTGTGCCGTGTGGACTTTCACAATACTTGTTaGTTTAGACATCAGTTCAGG +
Preference number: 2 (lower is better)
Translates to: PLTRAIVLLSSACVCRVDFHNTC*FRHQFR
Trigger: CCTGAACTGATGTCTAAAGCAACAAGTATTGTGAAA...GTCCACACGGCACACACAAGCGGAGCTGAGAAGCACGATGGCTCTAGTCAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR-3UTR GCA 90 bp CAAATTCTAGTTTTGTCACAAAGGCTCATGCTGTTCCGTGTCCTCTTCAAATCTAGCTCCGCTTGTGTGTaGCGTGTGGACTCCGAGTGG +
Preference number: 2 (lower is better)
Translates to: QILVLSQRLMLFRVLFKSSSACV*RVDSEW
Trigger: CCACTCGGAGTCCACACGGCACACACAAGCGGAGCT...AGATTTGAAGAGGACACGGAACAGCATGAGCCTTTGTGACAAAACTAGAATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR-3UTR CCA 90 bp GCAGCCTCTTCCAGAACAGTTTCCACTGCAGTGATCTTTCAGTTCTGCCCACATCTGAGGTGCAGACTCTaGTGGAATAGTGACACAGAA +
Preference number: 2 (lower is better)
Translates to: AASSRTVSTAVIFQFCPHLRCRL*WNSDTE
Trigger: TTCTGTGTCACTATTCCACCAGAGTCTGCACCTCAG...ATGTGGGCAGAACTGAAAGATCACTGCAGTGGAAACTGTTCTGGAAGAGGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR-3UTR TCA 90 bp ACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACTCAAACCACTACCTTaGCATAGATTTGATACCCTC +
Preference number: 2 (lower is better)
Translates to: TRQFLAPCSDSLSVKKTTLKPLP*HRFDTL
Trigger: GAGGGTATCAAATCTATGTCAAGGTAGTGGTTTGAG...TGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR-3UTR TCA 90 bp CATCTGATTCTCAGCCACACCAATCTTTCCAGTTTCACTGATGGAATGTGGCCCCTCAAACCACTACCTTaGCATAGATTTGATACCCTC +
Preference number: 2 (lower is better)
Translates to: HLILSHTNLSSFTDGMWPLKPLP*HRFDTL
Trigger: GAGGGTATCAAATCTATGTCAAGGTAGTGGTTTGAG...GGGCCACATTCCATCAGTGAAACTGGAAAGATTGGTGTGGCTGAGAATCAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR-3UTR TCA 90 bp ACCATCCAGTCCCTAAGCATGGGCTATGTTGCAGCCTCTTCCAGAACAGTTTCCATTTGGAAATCAGTCTaGATGGGACATACTATGGAT +
Preference number: 2 (lower is better)
Translates to: TIQSLSMGYVAASSRTVSIWKSV*MGHTMD
Trigger: ATCCATAGTATGTCCCATTCAGACTGATTTCCAAAT...GGAAACTGTTCTGGAAGAGGCTGCAACATAGCCCATGCTTAGGGACTGGATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR-3UTR TCA 90 bp GCAGCCTCTTCCAGAACAGTTTCCACTGCAGTGATCTTTCAGTTCTGCCCACATAGAACATCTACATACTaGGAGGTAGTATGGCAGTTA +
Preference number: 2 (lower is better)
Translates to: AASSRTVSTAVIFQFCPHRTSTY*EVVWQL
Trigger: TAACTGCCATACTACCTCTCAGTATGTAGATGTTCT...ATGTGGGCAGAACTGAAAGATCACTGCAGTGGAAACTGTTCTGGAAGAGGCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR-3UTR TCA 90 bp ACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACAAGAACATCTACATACTaGGAGGTAGTATGGCAGTTA +
Preference number: 2 (lower is better)
Translates to: TRQFLAPCSDSLSVKKTTRTSTY*EVVWQL
Trigger: TAACTGCCATACTACCTCTCAGTATGTAGATGTTCT...TGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR-3UTR TCA 90 bp CAAATTCTAGTTTTGTCACAAAGGCTCATGCTGTTCCGTGTCCTCTTCAAATCTGACAGCAAAGTCCTCTaGCTAGAGCCATCGTGCTTC +
Preference number: 2 (lower is better)
Translates to: QILVLSQRLMLFRVLFKSDSKVL*LEPSCF
Trigger: GAAGCACGATGGCTCTAGTCAGAGGACTTTGCTGTC...AGATTTGAAGAGGACACGGAACAGCATGAGCCTTTGTGACAAAACTAGAATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR-3UTR TCA 90 bp GTTCTGGTGATGATGGTTTTATCTTCCCTTTTAGTTGGGTGGGAAGTAACAGAAGACAGCAAAGTCCTCTaGCTAGAGCCATCGTGCTTC +
Preference number: 2 (lower is better)
Translates to: VLVMMVLSSLLVGWEVTEDSKVL*LEPSCF
Trigger: GAAGCACGATGGCTCTAGTCAGAGGACTTTGCTGTC...TTCTGTTACTTCCCACCCAACTAAAAGGGAAGATAAAACCATCATCACCAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR-3UTR CCA 90 bp ACCATCCAGTCCCTAAGCATGGGCTATGTTGCAGCCTCTTCCAGAACAGTTTCCGGAAATCAGTCTGAATaGGACATACTATGGATTCAA +
Preference number: 2 (lower is better)
Translates to: TIQSLSMGYVAASSRTVSGNQSE*DILWIQ
Trigger: TTGAATCCATAGTATGTCCCATTCAGACTGATTTCC...GGAAACTGTTCTGGAAGAGGCTGCAACATAGCCCATGCTTAGGGACTGGATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR-3UTR TCA 90 bp GTCAGTGAAGAAGACAACACGTCTGCACCTTCATTATTCAAACTTGGCTGGCTCGCTTCACTGACAGTCTaGATTGGATCTGATTGTTCT +
Preference number: 2 (lower is better)
Translates to: VSEEDNTSAPSLFKLGWLASLTV*IGSDCS
Trigger: AGAACAATCAGATCCAATTCAGACTGTCAGTGAAGC...GAGCCAGCCAAGTTTGAATAATGAAGGTGCAGACGTGTTGTCTTCTTCACTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR-3UTR TCA 90 bp GTTCTGGTGATGATGGTTTTATCTTCCCTTTTAGTTGGGTGGGAAGTAACAGAACAGTTTCCACTGCAGTaGTCTTTCAGTTCTGCCCAC +
Preference number: 2 (lower is better)
Translates to: VLVMMVLSSLLVGWEVTEQFPLQ*SFSSAH
Trigger: GTGGGCAGAACTGAAAGATCACTGCAGTGGAAACTG...TTCTGTTACTTCCCACCCAACTAAAAGGGAAGATAAAACCATCATCACCAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR CAA 90 bp TGTCTACCCTTTTCCCAAGACAGTCCTCATTTCCAAATTCTAGTTTaGTCACAAAGGCTCATGCTGTTCCGTGTCCTCTTCAAATCTGGA +
Preference number: 2 (lower is better)
Translates to: CLPFSQDSPHFQILV*SQRLMLFRVLFKSG
Trigger: TCCAGATTTGAAGAGGACACGGAACAGCATGAGCCTTTGTGACAAAACTAGAATTTGGAAATGAGGACTGTCTTGGGAAAAGGGTAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR-3UTR TCA 90 bp GTCAGTGAAGAAGACAACACGTCTGCACCTTCATTATTCAAACTTGGCTGGCTCCAACACCTTAATTGTTaGCACTACAAGGTGGAATTG +
Preference number: 2 (lower is better)
Translates to: VSEEDNTSAPSLFKLGWLQHLNC*HYKVEL
Trigger: CAATTCCACCTTGTAGTGTCAACAATTAAGGTGTTG...GAGCCAGCCAAGTTTGAATAATGAAGGTGCAGACGTGTTGTCTTCTTCACTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR-3UTR GCA 90 bp ACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACATTTCACAATACTTGTTaGTTTAGACATCAGTTCAGG +
Preference number: 2 (lower is better)
Translates to: TRQFLAPCSDSLSVKKTTFHNTC*FRHQFR
Trigger: CCTGAACTGATGTCTAAAGCAACAAGTATTGTGAAA...TGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR-3UTR CCA 90 bp GTTCTGGTGATGATGGTTTTATCTTCCCTTTTAGTTGGGTGGGAAGTAACAGAACTGAGGTGCAGACTCTaGTGGAATAGTGACACAGAA +
Preference number: 2 (lower is better)
Translates to: VLVMMVLSSLLVGWEVTELRCRL*WNSDTE
Trigger: TTCTGTGTCACTATTCCACCAGAGTCTGCACCTCAG...TTCTGTTACTTCCCACCCAACTAAAAGGGAAGATAAAACCATCATCACCAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR-3UTR CCA 90 bp CAAATTCTAGTTTTGTCACAAAGGCTCATGCTGTTCCGTGTCCTCTTCAAATCTTTCACTGATGGAATGTaGCCCCCTAGTTACTGTTGG +
Preference number: 2 (lower is better)
Translates to: QILVLSQRLMLFRVLFKSFTDGM*PPSYCW
Trigger: CCAACAGTAACTAGGGGGCCACATTCCATCAGTGAA...AGATTTGAAGAGGACACGGAACAGCATGAGCCTTTGTGACAAAACTAGAATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR-3UTR TCA 90 bp GTCAGTGAAGAAGACAACACGTCTGCACCTTCATTATTCAAACTTGGCTGGCTCATTCAACACACAGAATaGGTTTTCCTCAAACCACTA +
Preference number: 2 (lower is better)
Translates to: VSEEDNTSAPSLFKLGWLIQHTE*VFLKPL
Trigger: TAGTGGTTTGAGGAAAACTCATTCTGTGTGTTGAAT...GAGCCAGCCAAGTTTGAATAATGAAGGTGCAGACGTGTTGTCTTCTTCACTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR-3UTR TCA 90 bp CAAATTCTAGTTTTGTCACAAAGGCTCATGCTGTTCCGTGTCCTCTTCAAATCTGCTGGCTCTCTAGTATaGCTAAGTAACATGGCAACA +
Preference number: 2 (lower is better)
Translates to: QILVLSQRLMLFRVLFKSAGSLV*LSNMAT
Trigger: TGTTGCCATGTTACTTAGTCATACTAGAGAGCCAGC...AGATTTGAAGAGGACACGGAACAGCATGAGCCTTTGTGACAAAACTAGAATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR-3UTR GCA 90 bp AAGGTGGAATTGTCAATGAGATCATGTAAGCTGCTGACTGACCAAGTTTGTAGGTTGAAATATCAAATCTaGACAGCGCTGTCCCTTCAC +
Preference number: 2 (lower is better)
Translates to: KVELSMRSCKLLTDQVCRLKYQI*TALSLH
Trigger: GTGAAGGGACAGCGCTGTGCAGATTTGATATTTCAA...CCTACAAACTTGGTCAGTCAGCAGCTTACATGATCTCATTGACAATTCCACCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR-3UTR GCA 90 bp ACTAGAAGGTGTAAAAGATGCCCGCTGACACTACCAAGTAGCCTCTTAATAGAACAGAACAGTTTCCACTaGAGTGATCTTTCAGTTCTG +
Preference number: 2 (lower is better)
Translates to: TRRCKRCPLTLPSSLLIEQNSFH*SDLSVL
Trigger: CAGAACTGAAAGATCACTGCAGTGGAAACTGTTCTG...TTCTATTAAGAGGCTACTTGGTAGTGTCAGCGGGCATCTTTTACACCTTCTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR-3UTR CCA 90 bp CAAATTCTAGTTTTGTCACAAAGGCTCATGCTGTTCCGTGTCCTCTTCAAATCTAGGTGCAGACTCTGGTaGAATAGTGACACAGAAGTT +
Preference number: 2 (lower is better)
Translates to: QILVLSQRLMLFRVLFKSRCRLW*NSDTEV
Trigger: AACTTCTGTGTCACTATTCCACCAGAGTCTGCACCT...AGATTTGAAGAGGACACGGAACAGCATGAGCCTTTGTGACAAAACTAGAATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR CAA 90 bp GAATTTAGTAGGGTGAAAGAGTTAACTGCCAACCCGGCACTATCATaGTACTTGTTTGGAGAAAATCTGTTTTGTTCTGGTGATGATGGT +
Preference number: 2 (lower is better)
Translates to: EFSRVKELTANPALS*YLFGENLFCSGDDG
Trigger: ACCATCATCACCAGAACAAAACAGATTTTCTCCAAACAAGTACAATGATAGTGCCGGGTTGGCAGTTAACTCTTTCACCCTACTAAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR-3UTR TCA 90 bp ATTTTATCAGCGTTCAACAACACCTTAATTGTTGACACTACAAGGTGGAATTGTTTTCCTACTAAAGTCTaGGGTGCAGACTCTGGTGGA +
Preference number: 2 (lower is better)
Translates to: ILSAFNNTLIVDTTRWNCFPTKV*GADSGG
Trigger: TCCACCAGAGTCTGCACCTCAGACTTTAGTAGGAAA...ACAATTCCACCTTGTAGTGTCAACAATTAAGGTGTTGTTGAACGCTGATAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR-3UTR CCA 90 bp AAGGTGGAATTGTCAATGAGATCATGTAAGCTGCTGACTGACCAAGTTTGTAGGGGAAATCAGTCTGAATaGGACATACTATGGATTCAA +
Preference number: 2 (lower is better)
Translates to: KVELSMRSCKLLTDQVCRGNQSE*DILWIQ
Trigger: TTGAATCCATAGTATGTCCCATTCAGACTGATTTCC...CCTACAAACTTGGTCAGTCAGCAGCTTACATGATCTCATTGACAATTCCACCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR-3UTR TCA 90 bp ATTTTATCAGCGTTCAACAACACCTTAATTGTTGACACTACAAGGTGGAATTGTGCTTCAAAGCCCCTTTaGAATTGCAATAGTGCAGCA +
Preference number: 2 (lower is better)
Translates to: ILSAFNNTLIVDTTRWNCASKPL*NCNSAA
Trigger: TGCTGCACTATTGCAATTTCAAAGGGGCTTTGAAGC...ACAATTCCACCTTGTAGTGTCAACAATTAAGGTGTTGTTGAACGCTGATAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR-3UTR TCA 90 bp ATTTTATCAGCGTTCAACAACACCTTAATTGTTGACACTACAAGGTGGAATTGTGCTTCACTGACAGTCTaGATTGGATCTGATTGTTCT +
Preference number: 2 (lower is better)
Translates to: ILSAFNNTLIVDTTRWNCASLTV*IGSDCS
Trigger: AGAACAATCAGATCCAATTCAGACTGTCAGTGAAGC...ACAATTCCACCTTGTAGTGTCAACAATTAAGGTGTTGTTGAACGCTGATAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR-3UTR GCA 90 bp ATTTTATCAGCGTTCAACAACACCTTAATTGTTGACACTACAAGGTGGAATTGTTTGAAATATCAAATCTaGACAGCGCTGTCCCTTCAC +
Preference number: 2 (lower is better)
Translates to: ILSAFNNTLIVDTTRWNCLKYQI*TALSLH
Trigger: GTGAAGGGACAGCGCTGTGCAGATTTGATATTTCAA...ACAATTCCACCTTGTAGTGTCAACAATTAAGGTGTTGTTGAACGCTGATAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR CCA 72 bp CTCAGCTCCGCTTGTGTGTGCCGTGTGGACTCCGAGTaGCGTCGCGCGGAGGGCGAGTGGGCAGGAGGGCTC +
Preference number: 3 (lower is better)
Translates to: LSSACVCRVDSE*RRAEGEWAGGL
Trigger: GAGCCCTCCTGCCCACTCGCCCTCCGCGCGACGCCACTCGGAGTCCACACGGCACACACAAGCGGAGCTGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR TCA 72 bp AGGCCTTGGCACAGCGCGGACTGCTCGGGCACGGGCTaGGGCGTGTTAGGGCTGGATCCGGCCATGGTCTGG +
Preference number: 3 (lower is better)
Translates to: RPWHSADCSGTG*GVLGLDPAMVW
Trigger: CCAGACCATGGCCGGATCCAGCCCTAACACGCCTCAGCCCGTGCCCGAGCAGTCCGCGCTGTGCCAAGGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581110.1
ENST00000583024.1
3UTR CCA 72 bp CCATCGTGCTTCTCAGCTCCGCTTGTGTGTGCCGTGTaGACTCCGAGTGGCGTCGCGCGGAGGGCGAGTGGG +
Preference number: 3 (lower is better)
Translates to: PSCFSAPLVCAV*TPSGVARRASG
Trigger: CCCACTCGCCCTCCGCGCGACGCCACTCGGAGTCCACACGGCACACACAAGCGGAGCTGAGAAGCACGATGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR CCA 72 bp CGTGTGGACTCCGAGTGGCGTCGCGCGGAGGGCGAGTaGGCAGGAGGGCTCAGGCCAACTCTAAGGCACTTT +
Preference number: 3 (lower is better)
Translates to: RVDSEWRRAEGE*AGGLRPTLRHF
Trigger: AAAGTGCCTTAGAGTTGGCCTGAGCCCTCCTGCCCACTCGCCCTCCGCGCGACGCCACTCGGAGTCCACACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR GCA 72 bp ACTAGAGCCATCGTGCTTCTCAGCTCCGCTTGTGTGTaGCGTGTGGACTCCGAGTGGCGTCGCGCGGAGGGC +
Preference number: 3 (lower is better)
Translates to: TRAIVLLSSACV*RVDSEWRRAEG
Trigger: GCCCTCCGCGCGACGCCACTCGGAGTCCACACGGCACACACAAGCGGAGCTGAGAAGCACGATGGCTCTAGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR-3UTR CAA 90 bp TCCGCTTGTGTGTGCCGTGTGGACTCCGAGTGGCGTCGCGCGGAGGGCGAGTGGCCTTGTTCAGACAGCTaGTCAGTGAAGAAGACAACA +
Preference number: 3 (lower is better)
Translates to: SACVCRVDSEWRRAEGEWPCSDS*SVKKTT
Trigger: TGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGG...CCACTCGCCCTCCGCGCGACGCCACTCGGAGTCCACACGGCACACACAAGCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR-3UTR CAA 90 bp TCCGCTTGTGTGTGCCGTGTGGACTCCGAGTGGCGTCGCGCGGAGGGCGAGTGGTACCTTGACATAGATTaGATACCCTCCCTCAAAAGA +
Preference number: 3 (lower is better)
Translates to: SACVCRVDSEWRRAEGEWYLDID*IPSLKR
Trigger: TCTTTTGAGGGAGGGTATCAAATCTATGTCAAGGTA...CCACTCGCCCTCCGCGCGACGCCACTCGGAGTCCACACGGCACACACAAGCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR-3UTR CAA 90 bp CTGACTAGAGCCATCGTGCTTCTCAGCTCCGCTTGTGTGTGCCGTGTGGACTCCACAGTTCCTGGCTCCTaGTTCAGACAGCTTGTCAGT +
Preference number: 3 (lower is better)
Translates to: LTRAIVLLSSACVCRVDSTVPGS*FRQLVS
Trigger: ACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGT...GGAGTCCACACGGCACACACAAGCGGAGCTGAGAAGCACGATGGCTCTAGTCAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR-3UTR CAA 90 bp GTTCTGGTGATGATGGTTTTATCTTCCCTTTTAGTTGGGTGGGAAGTAACAGAAGCTTCTCAGCTCCGCTaGTGTGTGCCGTGTGGACTC +
Preference number: 3 (lower is better)
Translates to: VLVMMVLSSLLVGWEVTEASQLR*CVPCGL
Trigger: GAGTCCACACGGCACACACAAGCGGAGCTGAGAAGC...TTCTGTTACTTCCCACCCAACTAAAAGGGAAGATAAAACCATCATCACCAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR TCA 72 bp ATGTTGCAGCCTCTTCCAGAACAGTTTCCACTGCAGTaGTCTTTCAGTTCTGCCCACATTAGGTTAGCAGGC +
Preference number: 3 (lower is better)
Translates to: MLQPLPEQFPLQ*SFSSAHIRLAG
Trigger: GCCTGCTAACCTAATGTGGGCAGAACTGAAAGATCACTGCAGTGGAAACTGTTCTGGAAGAGGCTGCAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR TCA 72 bp GGCGGCGCAATAGAGAAGTACAAGGTTTTACTAGCTTaGGCTACTAGAAGGTGTAAAAGATGCCCGCTGACA +
Preference number: 3 (lower is better)
Translates to: GGAIEKYKVLLA*ATRRCKRCPLT
Trigger: TGTCAGCGGGCATCTTTTACACCTTCTAGTAGCTCAAGCTAGTAAAACCTTGTACTTCTCTATTGCGCCGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR TCA 72 bp GAGACTATTATTAGGGAGTGTGCTTCACTGACAGTCTaGATTGGATCTGATTGTTCTCCTGTTACACAGGAG +
Preference number: 3 (lower is better)
Translates to: ETIIRECASLTV*IGSDCSPVTQE
Trigger: CTCCTGTGTAACAGGAGAACAATCAGATCCAATTCAGACTGTCAGTGAAGCACACTCCCTAATAATAGTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR TCA 72 bp CACCTTCATTATTCAAACTTGGCTGGCTCTCTAGTATaGCTAAGTAACATGGCAACACATCTGTCTCTCCCT +
Preference number: 3 (lower is better)
Translates to: HLHYSNLAGSLV*LSNMATHLSLP
Trigger: AGGGAGAGACAGATGTGTTGCCATGTTACTTAGTCATACTAGAGAGCCAGCCAAGTTTGAATAATGAAGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR CCA 72 bp TGCAGACTCTGGTGGAATAGTGACACAGAAGTTATCTaGGTATACAAGAATCTAAAAGACATTCTCTCTGGA +
Preference number: 3 (lower is better)
Translates to: CRLWWNSDTEVI*VYKNLKDILSG
Trigger: TCCAGAGAGAATGTCTTTTAGATTCTTGTATACCCAGATAACTTCTGTGTCACTATTCCACCAGAGTCTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR-3UTR CAA 90 bp ATTTTATCAGCGTTCAACAACACCTTAATTGTTGACACTACAAGGTGGAATTGTTACCTTGACATAGATTaGATACCCTCCCTCAAAAGA +
Preference number: 3 (lower is better)
Translates to: ILSAFNNTLIVDTTRWNCYLDID*IPSLKR
Trigger: TCTTTTGAGGGAGGGTATCAAATCTATGTCAAGGTA...ACAATTCCACCTTGTAGTGTCAACAATTAAGGTGTTGTTGAACGCTGATAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR TCA 72 bp TTACATTTTATCAGCGTTCAACAACACCTTAATTGTTaGCACTACAAGGTGGAATTGTCAATGAGATCATGT +
Preference number: 3 (lower is better)
Translates to: LHFISVQQHLNC*HYKVELSMRSC
Trigger: ACATGATCTCATTGACAATTCCACCTTGTAGTGTCAACAATTAAGGTGTTGTTGAACGCTGATAAAATGTAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR CCA 90 bp GCCTTGGCACAGCGCGGACTGCTCGGGCACGGGCTGAGGCGTGTTAGGGCTGGACACCCCCTCGGGCCTTaGCTCTCGCAGCCGCTCGGG +
Preference number: 4 (lower is better)
Translates to: ALAQRGLLGHGLRRVRAGHPLGP*LSQPLG
Trigger: CCCGAGCGGCTGCGAGAGCCAAGGCCCGAGGGGGTG...TCCAGCCCTAACACGCCTCAGCCCGTGCCCGAGCAGTCCGCGCTGTGCCAAGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000581110.1
ENST00000583024.1
CDS-3UTR GCA 90 bp GCACAGCGCGGACTGCTCGGGCACGGGCTGAGGCGTGTTAGGGCTGGATCCGGCTGGTCTGGCTCAAGCTaGCTTCCGGCCCGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: AQRGLLGHGLRRVRAGSGWSGSS*LPARWP
Trigger: GGGCCAGCGGGCCGGAAGGCAGCTTGAGCCAGACCA...GCCGGATCCAGCCCTAACACGCCTCAGCCCGTGCCCGAGCAGTCCGCGCTGTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581110.1
ENST00000583024.1
CDS-3UTR CCA 90 bp CAGCGCGGACTGCTCGGGCACGGGCTGAGGCGTGTTAGGGCTGGATCCGGCCATTCGCAGCCGCTCGGGTaGACGCAGCCGGTGGCGAGT +
Preference number: 4 (lower is better)
Translates to: QRGLLGHGLRRVRAGSGHSQPLG*TQPVAS
Trigger: ACTCGCCACCGGCTGCGTCCACCCGAGCGGCTGCGA...ATGGCCGGATCCAGCCCTAACACGCCTCAGCCCGTGCCCGAGCAGTCCGCGCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581110.1
ENST00000583024.1
CDS-3UTR CCA 90 bp GGACTGCTCGGGCACGGGCTGAGGCGTGTTAGGGCTGGATCCGGCCATGGTCTGCACCCCCTCGGGCCTTaGCTCTCGCAGCCGCTCGGG +
Preference number: 4 (lower is better)
Translates to: GLLGHGLRRVRAGSGHGLHPLGP*LSQPLG
Trigger: CCCGAGCGGCTGCGAGAGCCAAGGCCCGAGGGGGTG...CAGACCATGGCCGGATCCAGCCCTAACACGCCTCAGCCCGTGCCCGAGCAGTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000581110.1
ENST00000583024.1
CDS-3UTR GCA 90 bp CGCGGACTGCTCGGGCACGGGCTGAGGCGTGTTAGGGCTGGATCCGGCCATGGTCCGCCCTCTCGCGGCTaGGCAGTGGCACCATCCCAA +
Preference number: 4 (lower is better)
Translates to: RGLLGHGLRRVRAGSGHGPPSRG*AVAPSQ
Trigger: TTGGGATGGTGCCACTGCGCAGCCGCGAGAGGGCGG...ACCATGGCCGGATCCAGCCCTAACACGCCTCAGCCCGTGCCCGAGCAGTCCGCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581110.1
CDS-3UTR GCA 90 bp TCCGCTTGTGTGTGCCGTGTGGACTCCGAGTGGCGTCGCGCGGAGGGCGAGTGGTGGTCTGGCTCAAGCTaGCTTCCGGCCCGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: SACVCRVDSEWRRAEGEWWSGSS*LPARWP
Trigger: GGGCCAGCGGGCCGGAAGGCAGCTTGAGCCAGACCA...CCACTCGCCCTCCGCGCGACGCCACTCGGAGTCCACACGGCACACACAAGCGGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR CCA 90 bp GCCTTGGCACAGCGCGGACTGCTCGGGCACGGGCTGAGGCGTGTTAGGGCTGGAATGTCGCTGCCGCCGTaGTACCGCCCTCTCGCGGCT +
Preference number: 4 (lower is better)
Translates to: ALAQRGLLGHGLRRVRAGMSLPP*YRPLAA
Trigger: AGCCGCGAGAGGGCGGTACCACGGCGGCAGCGACAT...TCCAGCCCTAACACGCCTCAGCCCGTGCCCGAGCAGTCCGCGCTGTGCCAAGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581110.1
CDS-3UTR CCA 90 bp GCACAGCGCGGACTGCTCGGGCACGGGCTGAGGCGTGTTAGGGCTGGATCCGGCGGAGGCGCTCGCTCATaGCAGCTGGCGGATGGAAGC +
Preference number: 4 (lower is better)
Translates to: AQRGLLGHGLRRVRAGSGGGARS*QLADGS
Trigger: GCTTCCATCCGCCAGCTGCCATGAGCGAGCGCCTCC...GCCGGATCCAGCCCTAACACGCCTCAGCCCGTGCCCGAGCAGTCCGCGCTGTGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581110.1
ENST00000583024.1
CDS-3UTR CCA 90 bp TTCTCAGCTCCGCTTGTGTGTGCCGTGTGGACTCCGAGTGGCGTCGCGCGGAGGTCGCAGCCGCTCGGGTaGACGCAGCCGGTGGCGAGT +
Preference number: 4 (lower is better)
Translates to: FSAPLVCAVWTPSGVARRSQPLG*TQPVAS
Trigger: ACTCGCCACCGGCTGCGTCCACCCGAGCGGCTGCGA...CCTCCGCGCGACGCCACTCGGAGTCCACACGGCACACACAAGCGGAGCTGAGAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR CCA 90 bp GATGTGGAAGTAGAGGCCTTGGCACAGCGCGGACTGCTCGGGCACGGGCTGAGGTCGCAGCCGCTCGGGTaGACGCAGCCGGTGGCGAGT +
Preference number: 4 (lower is better)
Translates to: DVEVEALAQRGLLGHGLRSQPLG*TQPVAS
Trigger: ACTCGCCACCGGCTGCGTCCACCCGAGCGGCTGCGA...CCTCAGCCCGTGCCCGAGCAGTCCGCGCTGTGCCAAGGCCTCTACTTCCACATC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581110.1
CDS-3UTR CCA 90 bp CAGCGCGGACTGCTCGGGCACGGGCTGAGGCGTGTTAGGGCTGGATCCGGCCATATGGCAGCTGGCGGATaGAAGCTACGCGGCGCCGCT +
Preference number: 4 (lower is better)
Translates to: QRGLLGHGLRRVRAGSGHMAAGG*KLRGAA
Trigger: AGCGGCGCCGCGTAGCTTCCATCCGCCAGCTGCCAT...ATGGCCGGATCCAGCCCTAACACGCCTCAGCCCGTGCCCGAGCAGTCCGCGCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581110.1
ENST00000583024.1
CDS-3UTR CCA 90 bp TTCTCAGCTCCGCTTGTGTGTGCCGTGTGGACTCCGAGTGGCGTCGCGCGGAGGCGTGTGGACTCCGAGTaGCGTCGCGCGGAGGGCGAG +
Preference number: 4 (lower is better)
Translates to: FSAPLVCAVWTPSGVARRRVDSE*RRAEGE
Trigger: CTCGCCCTCCGCGCGACGCCACTCGGAGTCCACACG...CCTCCGCGCGACGCCACTCGGAGTCCACACGGCACACACAAGCGGAGCTGAGAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR GCA 90 bp GCACAGCGCGGACTGCTCGGGCACGGGCTGAGGCGTGTTAGGGCTGGATCCGGCTGCTGCTGCTGCTGCTaGTGCTCCCACCACTGTCAC +
Preference number: 4 (lower is better)
Translates to: AQRGLLGHGLRRVRAGSGCCCCC*CSHHCH
Trigger: GTGACAGTGGTGGGAGCAGCAGCAGCAGCAGCAGCA...GCCGGATCCAGCCCTAACACGCCTCAGCCCGTGCCCGAGCAGTCCGCGCTGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581110.1
ENST00000583024.1
CDS-3UTR GCA 90 bp TCCGCTTGTGTGTGCCGTGTGGACTCCGAGTGGCGTCGCGCGGAGGGCGAGTGGAGAGGCCGCCCTCGGTaGTGTAGGCTGTGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: SACVCRVDSEWRRAEGEWRGRPR*CRLWKW
Trigger: CCACTTCCACAGCCTACAGCACCGAGGGCGGCCTCT...CCACTCGCCCTCCGCGCGACGCCACTCGGAGTCCACACGGCACACACAAGCGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR CCA 90 bp CGCGGACTGCTCGGGCACGGGCTGAGGCGTGTTAGGGCTGGATCCGGCCATGGTCTCGCTCATGGCAGCTaGCGGATGGAAGCTACGCGG +
Preference number: 4 (lower is better)
Translates to: RGLLGHGLRRVRAGSGHGLAHGS*RMEATR
Trigger: CCGCGTAGCTTCCATCCGCCAGCTGCCATGAGCGAG...ACCATGGCCGGATCCAGCCCTAACACGCCTCAGCCCGTGCCCGAGCAGTCCGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581110.1
ENST00000583024.1
CDS-3UTR CCA 90 bp GCCTTGGCACAGCGCGGACTGCTCGGGCACGGGCTGAGGCGTGTTAGGGCTGGAGATCCGGCCATGGTCTaGCTCAAGCTGCCTTCCGGC +
Preference number: 4 (lower is better)
Translates to: ALAQRGLLGHGLRRVRAGDPAMV*LKLPSG
Trigger: GCCGGAAGGCAGCTTGAGCCAGACCATGGCCGGATC...TCCAGCCCTAACACGCCTCAGCCCGTGCCCGAGCAGTCCGCGCTGTGCCAAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581110.1
ENST00000583024.1
CDS-3UTR CCA 90 bp CGCGGACTGCTCGGGCACGGGCTGAGGCGTGTTAGGGCTGGATCCGGCCATGGTGATCCGGCCATGGTCTaGCTCAAGCTGCCTTCCGGC +
Preference number: 4 (lower is better)
Translates to: RGLLGHGLRRVRAGSGHGDPAMV*LKLPSG
Trigger: GCCGGAAGGCAGCTTGAGCCAGACCATGGCCGGATC...ACCATGGCCGGATCCAGCCCTAACACGCCTCAGCCCGTGCCCGAGCAGTCCGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581110.1
ENST00000583024.1
CDS-3UTR CCA 90 bp GCACAGCGCGGACTGCTCGGGCACGGGCTGAGGCGTGTTAGGGCTGGATCCGGCGGCTGGATCCGGCCATaGTCTGGCTCAAGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: AQRGLLGHGLRRVRAGSGGWIRP*SGSSCL
Trigger: AAGGCAGCTTGAGCCAGACCATGGCCGGATCCAGCC...GCCGGATCCAGCCCTAACACGCCTCAGCCCGTGCCCGAGCAGTCCGCGCTGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581110.1
ENST00000583024.1
CDS-3UTR CCA 90 bp TCCGCTTGTGTGTGCCGTGTGGACTCCGAGTGGCGTCGCGCGGAGGGCGAGTGGCGGTGCTGTAGGCTGTaGAAGTGGGCCTCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: SACVCRVDSEWRRAEGEWRCCRL*KWASLR
Trigger: CCTGAGGGAGGCCCACTTCCACAGCCTACAGCACCG...CCACTCGCCCTCCGCGCGACGCCACTCGGAGTCCACACGGCACACACAAGCGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR TCA 90 bp GTGGAAGTAGAGGCCTTGGCACAGCGCGGACTGCTCGGGCACGGGCTGAGGCGTACCACTGTCACTGCCTaGAGACTGGGACGGAGGCGC +
Preference number: 4 (lower is better)
Translates to: VEVEALAQRGLLGHGLRRTTVTA*RLGRRR
Trigger: GCGCCTCCGTCCCAGTCTTCAGGCAGTGACAGTGGT...ACGCCTCAGCCCGTGCCCGAGCAGTCCGCGCTGTGCCAAGGCCTCTACTTCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581110.1
CDS-3UTR GCA 90 bp CAGCGCGGACTGCTCGGGCACGGGCTGAGGCGTGTTAGGGCTGGATCCGGCCATTGCTGCTGCTGCTGCTaGTGCTCCCACCACTGTCAC +
Preference number: 4 (lower is better)
Translates to: QRGLLGHGLRRVRAGSGHCCCCC*CSHHCH
Trigger: GTGACAGTGGTGGGAGCAGCAGCAGCAGCAGCAGCA...ATGGCCGGATCCAGCCCTAACACGCCTCAGCCCGTGCCCGAGCAGTCCGCGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581110.1
ENST00000583024.1
CDS-3UTR CCA 90 bp GATGTGGAAGTAGAGGCCTTGGCACAGCGCGGACTGCTCGGGCACGGGCTGAGGATGGCAGCTGGCGGATaGAAGCTACGCGGCGCCGCT +
Preference number: 4 (lower is better)
Translates to: DVEVEALAQRGLLGHGLRMAAGG*KLRGAA
Trigger: AGCGGCGCCGCGTAGCTTCCATCCGCCAGCTGCCAT...CCTCAGCCCGTGCCCGAGCAGTCCGCGCTGTGCCAAGGCCTCTACTTCCACATC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581110.1
CDS-3UTR CCA 90 bp GGACTGCTCGGGCACGGGCTGAGGCGTGTTAGGGCTGGATCCGGCCATGGTCTGGTGTCCCAGGAATCCTaGGACGGAGGCGCTCGCTCA +
Preference number: 4 (lower is better)
Translates to: GLLGHGLRRVRAGSGHGLVSQES*DGGARS
Trigger: TGAGCGAGCGCCTCCGTCCCAGGATTCCTGGGACAC...CAGACCATGGCCGGATCCAGCCCTAACACGCCTCAGCCCGTGCCCGAGCAGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583024.1
CDS-3UTR TCA 90 bp GCACAGCGCGGACTGCTCGGGCACGGGCTGAGGCGTGTTAGGGCTGGATCCGGCACCACTGTCACTGCCTaGAGACTCTGTGTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: AQRGLLGHGLRRVRAGSGTTVTA*RLCVPG
Trigger: TCCTGGGACACAGAGTCTTCAGGCAGTGACAGTGGT...GCCGGATCCAGCCCTAACACGCCTCAGCCCGTGCCCGAGCAGTCCGCGCTGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583024.1
CDS-3UTR CCA 90 bp GTTGATGTGGAAGTAGAGGCCTTGGCACAGCGCGGACTGCTCGGGCACGGGCTGGGAGGCGCTCGCTCATaGCAGCTGGCGGATGGAAGC +
Preference number: 4 (lower is better)
Translates to: VDVEVEALAQRGLLGHGLGGARS*QLADGS
Trigger: GCTTCCATCCGCCAGCTGCCATGAGCGAGCGCCTCC...CAGCCCGTGCCCGAGCAGTCCGCGCTGTGCCAAGGCCTCTACTTCCACATCAAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581110.1
CDS-3UTR CCA 90 bp TTGGCACAGCGCGGACTGCTCGGGCACGGGCTGAGGCGTGTTAGGGCTGGATCCGGCTGGATCCGGCCATaGTCTGGCTCAAGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: LAQRGLLGHGLRRVRAGSGWIRP*SGSSCL
Trigger: AAGGCAGCTTGAGCCAGACCATGGCCGGATCCAGCC...GGATCCAGCCCTAACACGCCTCAGCCCGTGCCCGAGCAGTCCGCGCTGTGCCAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581110.1
ENST00000583024.1
CDS-3UTR CCA 90 bp GTAGAGGCCTTGGCACAGCGCGGACTGCTCGGGCACGGGCTGAGGCGTGTTAGGTCACTGCCTGAAGACTaGGACGGAGGCGCTCGCTCA +
Preference number: 4 (lower is better)
Translates to: VEALAQRGLLGHGLRRVRSLPED*DGGARS
Trigger: TGAGCGAGCGCCTCCGTCCCAGTCTTCAGGCAGTGA...CCTAACACGCCTCAGCCCGTGCCCGAGCAGTCCGCGCTGTGCCAAGGCCTCTAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581110.1
CDS-3UTR GCA 90 bp CGCGGACTGCTCGGGCACGGGCTGAGGCGTGTTAGGGCTGGATCCGGCCATGGTTCCCACCACTGTCACTaGCTGAAGACTCTGTGTCCC +
Preference number: 4 (lower is better)
Translates to: RGLLGHGLRRVRAGSGHGSHHCH*LKTLCP
Trigger: GGGACACAGAGTCTTCAGGCAGTGACAGTGGTGGGA...ACCATGGCCGGATCCAGCCCTAACACGCCTCAGCCCGTGCCCGAGCAGTCCGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583024.1
CDS-3UTR CCA 90 bp TTCTCAGCTCCGCTTGTGTGTGCCGTGTGGACTCCGAGTGGCGTCGCGCGGAGGGGCTGGATCCGGCCATaGTCTGGCTCAAGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: FSAPLVCAVWTPSGVARRGWIRP*SGSSCL
Trigger: AAGGCAGCTTGAGCCAGACCATGGCCGGATCCAGCC...CCTCCGCGCGACGCCACTCGGAGTCCACACGGCACACACAAGCGGAGCTGAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR GCA 90 bp CCTCTGACTAGAGCCATCGTGCTTCTCAGCTCCGCTTGTGTGTGCCGTGTGGACCCGCCCTCTCGCGGCTaGGCAGTGGCACCATCCCAA +
Preference number: 4 (lower is better)
Translates to: PLTRAIVLLSSACVCRVDPPSRG*AVAPSQ
Trigger: TTGGGATGGTGCCACTGCGCAGCCGCGAGAGGGCGG...GTCCACACGGCACACACAAGCGGAGCTGAGAAGCACGATGGCTCTAGTCAGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR TCA 90 bp CTGACTAGAGCCATCGTGCTTCTCAGCTCCGCTTGTGTGTGCCGTGTGGACTCCTGCTCGGGCACGGGCTaGGGCGTGTTAGGGCTGGAT +
Preference number: 4 (lower is better)
Translates to: LTRAIVLLSSACVCRVDSCSGTG*GVLGLD
Trigger: ATCCAGCCCTAACACGCCTCAGCCCGTGCCCGAGCA...GGAGTCCACACGGCACACACAAGCGGAGCTGAGAAGCACGATGGCTCTAGTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR GCA 90 bp CCGGCACGCTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGAGCTCCGCTTGTGTGTaGCGTGTGGACTCCGAGTGG +
Preference number: 4 (lower is better)
Translates to: PARSTAGDPTVPGSLFRQSSACV*RVDSEW
Trigger: CCACTCGGAGTCCACACGGCACACACAAGCGGAGCT...CTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGTGCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR GCA 90 bp TCCGCTTGTGTGTGCCGTGTGGACTCCGAGTGGCGTCGCGCGGAGGGCGAGTGGTGTCACAAAGGCTCATaGTGTTCCGTGTCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: SACVCRVDSEWRRAEGEWCHKGS*CSVSSS
Trigger: TGAAGAGGACACGGAACAGCATGAGCCTTTGTGACA...CCACTCGCCCTCCGCGCGACGCCACTCGGAGTCCACACGGCACACACAAGCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR CCA 90 bp ACCATCCAGTCCCTAAGCATGGGCTATGTTGCAGCCTCTTCCAGAACAGTTTCCCACCCCCTCGGGCCTTaGCTCTCGCAGCCGCTCGGG +
Preference number: 4 (lower is better)
Translates to: TIQSLSMGYVAASSRTVSHPLGP*LSQPLG
Trigger: CCCGAGCGGCTGCGAGAGCCAAGGCCCGAGGGGGTG...GGAAACTGTTCTGGAAGAGGCTGCAACATAGCCCATGCTTAGGGACTGGATGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR TCA 90 bp TTCTCAGCTCCGCTTGTGTGTGCCGTGTGGACTCCGAGTGGCGTCGCGCGGAGGTTTCCTACTAAAGTCTaGGGTGCAGACTCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: FSAPLVCAVWTPSGVARRFPTKV*GADSGG
Trigger: TCCACCAGAGTCTGCACCTCAGACTTTAGTAGGAAA...CCTCCGCGCGACGCCACTCGGAGTCCACACGGCACACACAAGCGGAGCTGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR GCA 90 bp TCCGCTTGTGTGTGCCGTGTGGACTCCGAGTGGCGTCGCGCGGAGGGCGAGTGGCAGAACAGTTTCCACTaGAGTGATCTTTCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: SACVCRVDSEWRRAEGEWQNSFH*SDLSVL
Trigger: CAGAACTGAAAGATCACTGCAGTGGAAACTGTTCTG...CCACTCGCCCTCCGCGCGACGCCACTCGGAGTCCACACGGCACACACAAGCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR TCA 90 bp TCCGCTTGTGTGTGCCGTGTGGACTCCGAGTGGCGTCGCGCGGAGGGCGAGTGGCAACACCTTAATTGTTaGCACTACAAGGTGGAATTG +
Preference number: 4 (lower is better)
Translates to: SACVCRVDSEWRRAEGEWQHLNC*HYKVEL
Trigger: CAATTCCACCTTGTAGTGTCAACAATTAAGGTGTTG...CCACTCGCCCTCCGCGCGACGCCACTCGGAGTCCACACGGCACACACAAGCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR TCA 90 bp TTCTCAGCTCCGCTTGTGTGTGCCGTGTGGACTCCGAGTGGCGTCGCGCGGAGGGCTGGCTCTCTAGTATaGCTAAGTAACATGGCAACA +
Preference number: 4 (lower is better)
Translates to: FSAPLVCAVWTPSGVARRAGSLV*LSNMAT
Trigger: TGTTGCCATGTTACTTAGTCATACTAGAGAGCCAGC...CCTCCGCGCGACGCCACTCGGAGTCCACACGGCACACACAAGCGGAGCTGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR TCA 90 bp CCGGCACGCTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCAGTTTCCACTGCAGTaGTCTTTCAGTTCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: PARSTAGDPTVPGSLFRQQFPLQ*SFSSAH
Trigger: GTGGGCAGAACTGAAAGATCACTGCAGTGGAAACTG...CTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGTGCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR CCA 90 bp GCAGCCTCTTCCAGAACAGTTTCCACTGCAGTGATCTTTCAGTTCTGCCCACATATGTCGCTGCCGCCGTaGTACCGCCCTCTCGCGGCT +
Preference number: 4 (lower is better)
Translates to: AASSRTVSTAVIFQFCPHMSLPP*YRPLAA
Trigger: AGCCGCGAGAGGGCGGTACCACGGCGGCAGCGACAT...ATGTGGGCAGAACTGAAAGATCACTGCAGTGGAAACTGTTCTGGAAGAGGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR TCA 90 bp CTGACTAGAGCCATCGTGCTTCTCAGCTCCGCTTGTGTGTGCCGTGTGGACTCCGTGCCTCTGCTCATCTaGTTCTCAGCCACACCAATC +
Preference number: 4 (lower is better)
Translates to: LTRAIVLLSSACVCRVDSVPLLI*FSATPI
Trigger: GATTGGTGTGGCTGAGAATCAGATGAGCAGAGGCAC...GGAGTCCACACGGCACACACAAGCGGAGCTGAGAAGCACGATGGCTCTAGTCAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR GCA 90 bp ACCATCCAGTCCCTAAGCATGGGCTATGTTGCAGCCTCTTCCAGAACAGTTTCCAGAGGCCGCCCTCGGTaGTGTAGGCTGTGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: TIQSLSMGYVAASSRTVSRGRPR*CRLWKW
Trigger: CCACTTCCACAGCCTACAGCACCGAGGGCGGCCTCT...GGAAACTGTTCTGGAAGAGGCTGCAACATAGCCCATGCTTAGGGACTGGATGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR CCA 90 bp CATCTGATTCTCAGCCACACCAATCTTTCCAGTTTCACTGATGGAATGTGGCCCGGTGGACGCAGCCGGTaGCGAGTACCCCTCAGTCGG +
Preference number: 4 (lower is better)
Translates to: HLILSHTNLSSFTDGMWPGGRSR*RVPLSR
Trigger: CCGACTGAGGGGTACTCGCCACCGGCTGCGTCCACC...GGGCCACATTCCATCAGTGAAACTGGAAAGATTGGTGTGGCTGAGAATCAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR CCA 90 bp TCCGCTTGTGTGTGCCGTGTGGACTCCGAGTGGCGTCGCGCGGAGGGCGAGTGGTCCCTTTTAGTTGGGTaGGAAGTAACAGAAAATTTG +
Preference number: 4 (lower is better)
Translates to: SACVCRVDSEWRRAEGEWSLLVG*EVTENL
Trigger: CAAATTTTCTGTTACTTCCCACCCAACTAAAAGGGA...CCACTCGCCCTCCGCGCGACGCCACTCGGAGTCCACACGGCACACACAAGCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR TCA 90 bp ACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACAACGCTCCACAGCTGGTaGCCCGACAGTTCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: TRQFLAPCSDSLSVKKTTTLHSW*PDSSWL
Trigger: GAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGT...TGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR GCA 90 bp ACCATCCAGTCCCTAAGCATGGGCTATGTTGCAGCCTCTTCCAGAACAGTTTCCTGCTGCTGCTGCTGCTaGTGCTCCCACCACTGTCAC +
Preference number: 4 (lower is better)
Translates to: TIQSLSMGYVAASSRTVSCCCCC*CSHHCH
Trigger: GTGACAGTGGTGGGAGCAGCAGCAGCAGCAGCAGCA...GGAAACTGTTCTGGAAGAGGCTGCAACATAGCCCATGCTTAGGGACTGGATGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR GCA 90 bp CCTCTGACTAGAGCCATCGTGCTTCTCAGCTCCGCTTGTGTGTGCCGTGTGGACCAGAAGGCAAGAAACTaGCGGCACATCATGTCAGAG +
Preference number: 4 (lower is better)
Translates to: PLTRAIVLLSSACVCRVDQKARN*RHIMSE
Trigger: CTCTGACATGATGTGCCGGCAGTTTCTTGCCTTCTG...GTCCACACGGCACACACAAGCGGAGCTGAGAAGCACGATGGCTCTAGTCAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR GCA 90 bp CCGGCACGCTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGGGTGAAAGAGTTAACTaGCAACCCGGCACTATCATT +
Preference number: 4 (lower is better)
Translates to: PARSTAGDPTVPGSLFRQGERVN*QPGTII
Trigger: AATGATAGTGCCGGGTTGGCAGTTAACTCTTTCACC...CTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGTGCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR CCA 90 bp GTCAGTGAAGAAGACAACACGTCTGCACCTTCATTATTCAAACTTGGCTGGCTCATGTCGCTGCCGCCGTaGTACCGCCCTCTCGCGGCT +
Preference number: 4 (lower is better)
Translates to: VSEEDNTSAPSLFKLGWLMSLPP*YRPLAA
Trigger: AGCCGCGAGAGGGCGGTACCACGGCGGCAGCGACAT...GAGCCAGCCAAGTTTGAATAATGAAGGTGCAGACGTGTTGTCTTCTTCACTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR CCA 90 bp CACTACAAGGTGGAATTGTCAATGAGATCATGTAAGCTGCTGACTGACCAAGTTCACCCCCTCGGGCCTTaGCTCTCGCAGCCGCTCGGG +
Preference number: 4 (lower is better)
Translates to: HYKVELSMRSCKLLTDQVHPLGP*LSQPLG
Trigger: CCCGAGCGGCTGCGAGAGCCAAGGCCCGAGGGGGTG...AACTTGGTCAGTCAGCAGCTTACATGATCTCATTGACAATTCCACCTTGTAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR CCA 90 bp CATCTGATTCTCAGCCACACCAATCTTTCCAGTTTCACTGATGGAATGTGGCCCATGGCAGCTGGCGGATaGAAGCTACGCGGCGCCGCT +
Preference number: 4 (lower is better)
Translates to: HLILSHTNLSSFTDGMWPMAAGG*KLRGAA
Trigger: AGCGGCGCCGCGTAGCTTCCATCCGCCAGCTGCCAT...GGGCCACATTCCATCAGTGAAACTGGAAAGATTGGTGTGGCTGAGAATCAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR CCA 90 bp ACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACAGATCCGGCCATGGTCTaGCTCAAGCTGCCTTCCGGC +
Preference number: 4 (lower is better)
Translates to: TRQFLAPCSDSLSVKKTTDPAMV*LKLPSG
Trigger: GCCGGAAGGCAGCTTGAGCCAGACCATGGCCGGATC...TGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR CAA 72 bp CGCTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTaGTTCAGACAGCTTGTCAGTGAAGAAGACAACACG +
Preference number: 4 (lower is better)
Translates to: RSTAGDPTVPGS*FRQLVSEEDNT
Trigger: CGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR TCA 90 bp TTCTCAGCTCCGCTTGTGTGTGCCGTGTGGACTCCGAGTGGCGTCGCGCGGAGGATTTGGAAATCAGTCTaGATGGGACATACTATGGAT +
Preference number: 4 (lower is better)
Translates to: FSAPLVCAVWTPSGVARRIWKSV*MGHTMD
Trigger: ATCCATAGTATGTCCCATTCAGACTGATTTCCAAAT...CCTCCGCGCGACGCCACTCGGAGTCCACACGGCACACACAAGCGGAGCTGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR TCA 90 bp CTGACTAGAGCCATCGTGCTTCTCAGCTCCGCTTGTGTGTGCCGTGTGGACTCCAGGACAGGGTGGAGATaGGCTCTTGAATTTAGTAGG +
Preference number: 4 (lower is better)
Translates to: LTRAIVLLSSACVCRVDSRTGWR*ALEFSR
Trigger: CCTACTAAATTCAAGAGCTCATCTCCACCCTGTCCT...GGAGTCCACACGGCACACACAAGCGGAGCTGAGAAGCACGATGGCTCTAGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR GCA 90 bp GGTGCAGACTCTGGTGGAATAGTGACACAGAAGTTATCTGGGTATACAAGAATCTGGTCTGGCTCAAGCTaGCTTCCGGCCCGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: GADSGGIVTQKLSGYTRIWSGSS*LPARWP
Trigger: GGGCCAGCGGGCCGGAAGGCAGCTTGAGCCAGACCA...GATTCTTGTATACCCAGATAACTTCTGTGTCACTATTCCACCAGAGTCTGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR GCA 90 bp CCGGCACGCTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGTTGAAATATCAAATCTaGACAGCGCTGTCCCTTCAC +
Preference number: 4 (lower is better)
Translates to: PARSTAGDPTVPGSLFRQLKYQI*TALSLH
Trigger: GTGAAGGGACAGCGCTGTGCAGATTTGATATTTCAA...CTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGTGCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR CCA 90 bp AAGGTGGAATTGTCAATGAGATCATGTAAGCTGCTGACTGACCAAGTTTGTAGGTCGCAGCCGCTCGGGTaGACGCAGCCGGTGGCGAGT +
Preference number: 4 (lower is better)
Translates to: KVELSMRSCKLLTDQVCRSQPLG*TQPVAS
Trigger: ACTCGCCACCGGCTGCGTCCACCCGAGCGGCTGCGA...CCTACAAACTTGGTCAGTCAGCAGCTTACATGATCTCATTGACAATTCCACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR CCA 90 bp GTCAGTGAAGAAGACAACACGTCTGCACCTTCATTATTCAAACTTGGCTGGCTCATGGCAGCTGGCGGATaGAAGCTACGCGGCGCCGCT +
Preference number: 4 (lower is better)
Translates to: VSEEDNTSAPSLFKLGWLMAAGG*KLRGAA
Trigger: AGCGGCGCCGCGTAGCTTCCATCCGCCAGCTGCCAT...GAGCCAGCCAAGTTTGAATAATGAAGGTGCAGACGTGTTGTCTTCTTCACTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR CCA 90 bp CATCTGATTCTCAGCCACACCAATCTTTCCAGTTTCACTGATGGAATGTGGCCCCTCGCTCATGGCAGCTaGCGGATGGAAGCTACGCGG +
Preference number: 4 (lower is better)
Translates to: HLILSHTNLSSFTDGMWPLAHGS*RMEATR
Trigger: CCGCGTAGCTTCCATCCGCCAGCTGCCATGAGCGAG...GGGCCACATTCCATCAGTGAAACTGGAAAGATTGGTGTGGCTGAGAATCAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR CCA 90 bp CCTCTGACTAGAGCCATCGTGCTTCTCAGCTCCGCTTGTGTGTGCCGTGTGGACCTGAGGTGCAGACTCTaGTGGAATAGTGACACAGAA +
Preference number: 4 (lower is better)
Translates to: PLTRAIVLLSSACVCRVDLRCRL*WNSDTE
Trigger: TTCTGTGTCACTATTCCACCAGAGTCTGCACCTCAG...GTCCACACGGCACACACAAGCGGAGCTGAGAAGCACGATGGCTCTAGTCAGAGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR CCA 90 bp CTGACTAGAGCCATCGTGCTTCTCAGCTCCGCTTGTGTGTGCCGTGTGGACTCCTTCACTGATGGAATGTaGCCCCCTAGTTACTGTTGG +
Preference number: 4 (lower is better)
Translates to: LTRAIVLLSSACVCRVDSFTDGM*PPSYCW
Trigger: CCAACAGTAACTAGGGGGCCACATTCCATCAGTGAA...GGAGTCCACACGGCACACACAAGCGGAGCTGAGAAGCACGATGGCTCTAGTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR CCA 90 bp CCTCTGACTAGAGCCATCGTGCTTCTCAGCTCCGCTTGTGTGTGCCGTGTGGACTGTCCTCTTCAAATCTaGACCGACAGCAAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: PLTRAIVLLSSACVCRVDCPLQI*TDSKVL
Trigger: GAGGACTTTGCTGTCGGTCCAGATTTGAAGAGGACA...GTCCACACGGCACACACAAGCGGAGCTGAGAAGCACGATGGCTCTAGTCAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR GCA 90 bp CATCTGATTCTCAGCCACACCAATCTTTCCAGTTTCACTGATGGAATGTGGCCCAGCTCCGCTTGTGTGTaGCGTGTGGACTCCGAGTGG +
Preference number: 4 (lower is better)
Translates to: HLILSHTNLSSFTDGMWPSSACV*RVDSEW
Trigger: CCACTCGGAGTCCACACGGCACACACAAGCGGAGCT...GGGCCACATTCCATCAGTGAAACTGGAAAGATTGGTGTGGCTGAGAATCAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR GCA 90 bp TTCTCAGCTCCGCTTGTGTGTGCCGTGTGGACTCCGAGTGGCGTCGCGCGGAGGCAGCATCGAGTTGTTTaGTTTATTGTTAGACACAAT +
Preference number: 4 (lower is better)
Translates to: FSAPLVCAVWTPSGVARRQHRVV*FIVRHN
Trigger: ATTGTGTCTAACAATAAAGCAAACAACTCGATGCTG...CCTCCGCGCGACGCCACTCGGAGTCCACACGGCACACACAAGCGGAGCTGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR GCA 90 bp CCTCTGACTAGAGCCATCGTGCTTCTCAGCTCCGCTTGTGTGTGCCGTGTGGACGGTGAAAGAGTTAACTaGCAACCCGGCACTATCATT +
Preference number: 4 (lower is better)
Translates to: PLTRAIVLLSSACVCRVDGERVN*QPGTII
Trigger: AATGATAGTGCCGGGTTGGCAGTTAACTCTTTCACC...GTCCACACGGCACACACAAGCGGAGCTGAGAAGCACGATGGCTCTAGTCAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR GCA 90 bp CTGACTAGAGCCATCGTGCTTCTCAGCTCCGCTTGTGTGTGCCGTGTGGACTCCAGAAGGTGTAAAAGATaGCCGCTGACACTACCAAGT +
Preference number: 4 (lower is better)
Translates to: LTRAIVLLSSACVCRVDSRRCKR*PLTLPS
Trigger: ACTTGGTAGTGTCAGCGGGCATCTTTTACACCTTCT...GGAGTCCACACGGCACACACAAGCGGAGCTGAGAAGCACGATGGCTCTAGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR CCA 90 bp ACTAGAAGGTGTAAAAGATGCCCGCTGACACTACCAAGTAGCCTCTTAATAGAAGGTGGACGCAGCCGGTaGCGAGTACCCCTCAGTCGG +
Preference number: 4 (lower is better)
Translates to: TRRCKRCPLTLPSSLLIEGGRSR*RVPLSR
Trigger: CCGACTGAGGGGTACTCGCCACCGGCTGCGTCCACC...TTCTATTAAGAGGCTACTTGGTAGTGTCAGCGGGCATCTTTTACACCTTCTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR CCA 90 bp ACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACATCCTTCTCCTTTTCCTaGGACGGAGGCGCTCGCTCA +
Preference number: 4 (lower is better)
Translates to: TRQFLAPCSDSLSVKKTTSFSFS*DGGARS
Trigger: TGAGCGAGCGCCTCCGTCCCAGGAAAAGGAGAAGGA...TGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR CCA 90 bp CTGACTAGAGCCATCGTGCTTCTCAGCTCCGCTTGTGTGTGCCGTGTGGACTCCAGGTGCAGACTCTGGTaGAATAGTGACACAGAAGTT +
Preference number: 4 (lower is better)
Translates to: LTRAIVLLSSACVCRVDSRCRLW*NSDTEV
Trigger: AACTTCTGTGTCACTATTCCACCAGAGTCTGCACCT...GGAGTCCACACGGCACACACAAGCGGAGCTGAGAAGCACGATGGCTCTAGTCAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR TCA 90 bp CCTCTGACTAGAGCCATCGTGCTTCTCAGCTCCGCTTGTGTGTGCCGTGTGGACCTCAAACCACTACCTTaGCATAGATTTGATACCCTC +
Preference number: 4 (lower is better)
Translates to: PLTRAIVLLSSACVCRVDLKPLP*HRFDTL
Trigger: GAGGGTATCAAATCTATGTCAAGGTAGTGGTTTGAG...GTCCACACGGCACACACAAGCGGAGCTGAGAAGCACGATGGCTCTAGTCAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR GCA 90 bp GTTCTGGTGATGATGGTTTTATCTTCCCTTTTAGTTGGGTGGGAAGTAACAGAACCGCCCTCTCGCGGCTaGGCAGTGGCACCATCCCAA +
Preference number: 4 (lower is better)
Translates to: VLVMMVLSSLLVGWEVTEPPSRG*AVAPSQ
Trigger: TTGGGATGGTGCCACTGCGCAGCCGCGAGAGGGCGG...TTCTGTTACTTCCCACCCAACTAAAAGGGAAGATAAAACCATCATCACCAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR GCA 90 bp CTGACTAGAGCCATCGTGCTTCTCAGCTCCGCTTGTGTGTGCCGTGTGGACTCCTTGAAATATCAAATCTaGACAGCGCTGTCCCTTCAC +
Preference number: 4 (lower is better)
Translates to: LTRAIVLLSSACVCRVDSLKYQI*TALSLH
Trigger: GTGAAGGGACAGCGCTGTGCAGATTTGATATTTCAA...GGAGTCCACACGGCACACACAAGCGGAGCTGAGAAGCACGATGGCTCTAGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR CCA 90 bp ACTAGAAGGTGTAAAAGATGCCCGCTGACACTACCAAGTAGCCTCTTAATAGAAGGAGGCGCTCGCTCATaGCAGCTGGCGGATGGAAGC +
Preference number: 4 (lower is better)
Translates to: TRRCKRCPLTLPSSLLIEGGARS*QLADGS
Trigger: GCTTCCATCCGCCAGCTGCCATGAGCGAGCGCCTCC...TTCTATTAAGAGGCTACTTGGTAGTGTCAGCGGGCATCTTTTACACCTTCTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR CCA 90 bp GTCAGTGAAGAAGACAACACGTCTGCACCTTCATTATTCAAACTTGGCTGGCTCTGTAGGCTGTGGAAGTaGGCCTCCCTCAGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: VSEEDNTSAPSLFKLGWLCRLWK*ASLRVW
Trigger: CCAGACCCTGAGGGAGGCCCACTTCCACAGCCTACA...GAGCCAGCCAAGTTTGAATAATGAAGGTGCAGACGTGTTGTCTTCTTCACTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR CCA 90 bp CCGGCACGCTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGGGAAATCAGTCTGAATaGGACATACTATGGATTCAA +
Preference number: 4 (lower is better)
Translates to: PARSTAGDPTVPGSLFRQGNQSE*DILWIQ
Trigger: TTGAATCCATAGTATGTCCCATTCAGACTGATTTCC...CTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGTGCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR CCA 90 bp GGTGCAGACTCTGGTGGAATAGTGACACAGAAGTTATCTGGGTATACAAGAATCCTTGTGTGTGCCGTGTaGACTCCGAGTGGCGTCGCG +
Preference number: 4 (lower is better)
Translates to: GADSGGIVTQKLSGYTRILVCAV*TPSGVA
Trigger: CGCGACGCCACTCGGAGTCCACACGGCACACACAAG...GATTCTTGTATACCCAGATAACTTCTGTGTCACTATTCCACCAGAGTCTGCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR TCA 90 bp ACCATCCAGTCCCTAAGCATGGGCTATGTTGCAGCCTCTTCCAGAACAGTTTCCGTGTCCCAGGAATCCTaGAAGACAGGGTTTCTGCTA +
Preference number: 4 (lower is better)
Translates to: TIQSLSMGYVAASSRTVSVSQES*KTGFLL
Trigger: TAGCAGAAACCCTGTCTTTCAGGATTCCTGGGACAC...GGAAACTGTTCTGGAAGAGGCTGCAACATAGCCCATGCTTAGGGACTGGATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR TCA 90 bp CCTCTGACTAGAGCCATCGTGCTTCTCAGCTCCGCTTGTGTGTGCCGTGTGGACAGTCTGAATTGGATCTaGTTGTTCTCCTGTTACACA +
Preference number: 4 (lower is better)
Translates to: PLTRAIVLLSSACVCRVDSLNWI*LFSCYT
Trigger: TGTGTAACAGGAGAACAATCAGATCCAATTCAGACT...GTCCACACGGCACACACAAGCGGAGCTGAGAAGCACGATGGCTCTAGTCAGAGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR GCA 90 bp GGTGCAGACTCTGGTGGAATAGTGACACAGAAGTTATCTGGGTATACAAGAATCTGCTGCTGCTGCTGCTaGTGCTCCCACCACTGTCAC +
Preference number: 4 (lower is better)
Translates to: GADSGGIVTQKLSGYTRICCCCC*CSHHCH
Trigger: GTGACAGTGGTGGGAGCAGCAGCAGCAGCAGCAGCA...GATTCTTGTATACCCAGATAACTTCTGTGTCACTATTCCACCAGAGTCTGCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR GCA 90 bp CCGGCACGCTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGTTTCACAATACTTGTTaGTTTAGACATCAGTTCAGG +
Preference number: 4 (lower is better)
Translates to: PARSTAGDPTVPGSLFRQFHNTC*FRHQFR
Trigger: CCTGAACTGATGTCTAAAGCAACAAGTATTGTGAAA...CTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGTGCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR CCA 90 bp AAGGTGGAATTGTCAATGAGATCATGTAAGCTGCTGACTGACCAAGTTTGTAGGCTCGCTCATGGCAGCTaGCGGATGGAAGCTACGCGG +
Preference number: 4 (lower is better)
Translates to: KVELSMRSCKLLTDQVCRLAHGS*RMEATR
Trigger: CCGCGTAGCTTCCATCCGCCAGCTGCCATGAGCGAG...CCTACAAACTTGGTCAGTCAGCAGCTTACATGATCTCATTGACAATTCCACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR CCA 90 bp AAGGTGGAATTGTCAATGAGATCATGTAAGCTGCTGACTGACCAAGTTTGTAGGCGGTGCTGTAGGCTGTaGAAGTGGGCCTCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: KVELSMRSCKLLTDQVCRRCCRL*KWASLR
Trigger: CCTGAGGGAGGCCCACTTCCACAGCCTACAGCACCG...CCTACAAACTTGGTCAGTCAGCAGCTTACATGATCTCATTGACAATTCCACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR CCA 90 bp AAGGTGGAATTGTCAATGAGATCATGTAAGCTGCTGACTGACCAAGTTTGTAGGCTTGTGTGTGCCGTGTaGACTCCGAGTGGCGTCGCG +
Preference number: 4 (lower is better)
Translates to: KVELSMRSCKLLTDQVCRLVCAV*TPSGVA
Trigger: CGCGACGCCACTCGGAGTCCACACGGCACACACAAG...CCTACAAACTTGGTCAGTCAGCAGCTTACATGATCTCATTGACAATTCCACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR CAA 72 bp GTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTaGTCAGTGAAGAAGACAACACGTCTGCACCTTCAT +
Preference number: 4 (lower is better)
Translates to: VTRQFLAPCSDS*SVKKTTRLHLH
Trigger: ATGAAGGTGCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR TCA 90 bp GCAGCCTCTTCCAGAACAGTTTCCACTGCAGTGATCTTTCAGTTCTGCCCACATGTAAAAGATGCCCGCTaGCACTACCAAGTAGCCTCT +
Preference number: 4 (lower is better)
Translates to: AASSRTVSTAVIFQFCPHVKDAR*HYQVAS
Trigger: AGAGGCTACTTGGTAGTGTCAGCGGGCATCTTTTAC...ATGTGGGCAGAACTGAAAGATCACTGCAGTGGAAACTGTTCTGGAAGAGGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR GCA 90 bp ACCATCCAGTCCCTAAGCATGGGCTATGTTGCAGCCTCTTCCAGAACAGTTTCCTGTCACAAAGGCTCATaGTGTTCCGTGTCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: TIQSLSMGYVAASSRTVSCHKGS*CSVSSS
Trigger: TGAAGAGGACACGGAACAGCATGAGCCTTTGTGACA...GGAAACTGTTCTGGAAGAGGCTGCAACATAGCCCATGCTTAGGGACTGGATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR CCA 90 bp GTTCTGGTGATGATGGTTTTATCTTCCCTTTTAGTTGGGTGGGAAGTAACAGAAGATCCGGCCATGGTCTaGCTCAAGCTGCCTTCCGGC +
Preference number: 4 (lower is better)
Translates to: VLVMMVLSSLLVGWEVTEDPAMV*LKLPSG
Trigger: GCCGGAAGGCAGCTTGAGCCAGACCATGGCCGGATC...TTCTGTTACTTCCCACCCAACTAAAAGGGAAGATAAAACCATCATCACCAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR CCA 90 bp CTGACTAGAGCCATCGTGCTTCTCAGCTCCGCTTGTGTGTGCCGTGTGGACTCCGGAAATCAGTCTGAATaGGACATACTATGGATTCAA +
Preference number: 4 (lower is better)
Translates to: LTRAIVLLSSACVCRVDSGNQSE*DILWIQ
Trigger: TTGAATCCATAGTATGTCCCATTCAGACTGATTTCC...GGAGTCCACACGGCACACACAAGCGGAGCTGAGAAGCACGATGGCTCTAGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR CCA 90 bp ATTTTATCAGCGTTCAACAACACCTTAATTGTTGACACTACAAGGTGGAATTGTCGTGTGGACTCCGAGTaGCGTCGCGCGGAGGGCGAG +
Preference number: 4 (lower is better)
Translates to: ILSAFNNTLIVDTTRWNCRVDSE*RRAEGE
Trigger: CTCGCCCTCCGCGCGACGCCACTCGGAGTCCACACG...ACAATTCCACCTTGTAGTGTCAACAATTAAGGTGTTGTTGAACGCTGATAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR CCA 90 bp CCTCTGACTAGAGCCATCGTGCTTCTCAGCTCCGCTTGTGTGTGCCGTGTGGACATCTTCCCTTTTAGTTaGGTGGGAAGTAACAGAAAA +
Preference number: 4 (lower is better)
Translates to: PLTRAIVLLSSACVCRVDIFPFS*VGSNRK
Trigger: TTTTCTGTTACTTCCCACCCAACTAAAAGGGAAGAT...GTCCACACGGCACACACAAGCGGAGCTGAGAAGCACGATGGCTCTAGTCAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR TCA 90 bp ACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACATTTCCTACTAAAGTCTaGGGTGCAGACTCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: TRQFLAPCSDSLSVKKTTFPTKV*GADSGG
Trigger: TCCACCAGAGTCTGCACCTCAGACTTTAGTAGGAAA...TGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR TCA 90 bp ACCATCCAGTCCCTAAGCATGGGCTATGTTGCAGCCTCTTCCAGAACAGTTTCCGCTGGCTCTCTAGTATaGCTAAGTAACATGGCAACA +
Preference number: 4 (lower is better)
Translates to: TIQSLSMGYVAASSRTVSAGSLV*LSNMAT
Trigger: TGTTGCCATGTTACTTAGTCATACTAGAGAGCCAGC...GGAAACTGTTCTGGAAGAGGCTGCAACATAGCCCATGCTTAGGGACTGGATGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR TCA 90 bp CATCTGATTCTCAGCCACACCAATCTTTCCAGTTTCACTGATGGAATGTGGCCCCAGACAGCTTGTCAGTaGAGAAGACAACACGTCTGC +
Preference number: 4 (lower is better)
Translates to: HLILSHTNLSSFTDGMWPQTACQ*RRQHVC
Trigger: GCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTG...GGGCCACATTCCATCAGTGAAACTGGAAAGATTGGTGTGGCTGAGAATCAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR TCA 90 bp GTCAGTGAAGAAGACAACACGTCTGCACCTTCATTATTCAAACTTGGCTGGCTCGACAGCAAAGTCCTCTaGCTAGAGCCATCGTGCTTC +
Preference number: 4 (lower is better)
Translates to: VSEEDNTSAPSLFKLGWLDSKVL*LEPSCF
Trigger: GAAGCACGATGGCTCTAGTCAGAGGACTTTGCTGTC...GAGCCAGCCAAGTTTGAATAATGAAGGTGCAGACGTGTTGTCTTCTTCACTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR GCA 90 bp GGTGCAGACTCTGGTGGAATAGTGACACAGAAGTTATCTGGGTATACAAGAATCTCCCACCACTGTCACTaGCTGAAGACTCTGTGTCCC +
Preference number: 4 (lower is better)
Translates to: GADSGGIVTQKLSGYTRISHHCH*LKTLCP
Trigger: GGGACACAGAGTCTTCAGGCAGTGACAGTGGTGGGA...GATTCTTGTATACCCAGATAACTTCTGTGTCACTATTCCACCAGAGTCTGCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403627.7
CDS-3UTR GCA 90 bp CACTACAAGGTGGAATTGTCAATGAGATCATGTAAGCTGCTGACTGACCAAGTTTCCCACCACTGTCACTaGCTGAAGACGCGCAGAACG +
Preference number: 4 (lower is better)
Translates to: HYKVELSMRSCKLLTDQVSHHCH*LKTRRT
Trigger: CGTTCTGCGCGTCTTCAGGCAGTGACAGTGGTGGGA...AACTTGGTCAGTCAGCAGCTTACATGATCTCATTGACAATTCCACCTTGTAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405159.7
CDS-3UTR CCA 90 bp GTTCTGGTGATGATGGTTTTATCTTCCCTTTTAGTTGGGTGGGAAGTAACAGAAGGCTGGATCCGGCCATaGTCTGGCTCAAGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: VLVMMVLSSLLVGWEVTEGWIRP*SGSSCL
Trigger: AAGGCAGCTTGAGCCAGACCATGGCCGGATCCAGCC...TTCTGTTACTTCCCACCCAACTAAAAGGGAAGATAAAACCATCATCACCAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR CCA 90 bp GTTCTGGTGATGATGGTTTTATCTTCCCTTTTAGTTGGGTGGGAAGTAACAGAATGTAGGCTGTGGAAGTaGGCCTCCCTCAGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: VLVMMVLSSLLVGWEVTECRLWK*ASLRVW
Trigger: CCAGACCCTGAGGGAGGCCCACTTCCACAGCCTACA...TTCTGTTACTTCCCACCCAACTAAAAGGGAAGATAAAACCATCATCACCAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR TCA 90 bp GTCAGTGAAGAAGACAACACGTCTGCACCTTCATTATTCAAACTTGGCTGGCTCGTGTCCCAGGAATCCTaGAAGACAGGGTTTCTGCTA +
Preference number: 4 (lower is better)
Translates to: VSEEDNTSAPSLFKLGWLVSQES*KTGFLL
Trigger: TAGCAGAAACCCTGTCTTTCAGGATTCCTGGGACAC...GAGCCAGCCAAGTTTGAATAATGAAGGTGCAGACGTGTTGTCTTCTTCACTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR TCA 90 bp ACTAGAAGGTGTAAAAGATGCCCGCTGACACTACCAAGTAGCCTCTTAATAGAAACCACTGTCACTGCCTaGAGACTCTGTGTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: TRRCKRCPLTLPSSLLIETTVTA*RLCVPG
Trigger: TCCTGGGACACAGAGTCTTCAGGCAGTGACAGTGGT...TTCTATTAAGAGGCTACTTGGTAGTGTCAGCGGGCATCTTTTACACCTTCTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403627.7
CDS-3UTR TCA 90 bp GCAGCCTCTTCCAGAACAGTTTCCACTGCAGTGATCTTTCAGTTCTGCCCACATGCTTCAAAGCCCCTTTaGAATTGCAATAGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: AASSRTVSTAVIFQFCPHASKPL*NCNSAA
Trigger: TGCTGCACTATTGCAATTTCAAAGGGGCTTTGAAGC...ATGTGGGCAGAACTGAAAGATCACTGCAGTGGAAACTGTTCTGGAAGAGGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR GCA 90 bp CATCTGATTCTCAGCCACACCAATCTTTCCAGTTTCACTGATGGAATGTGGCCCAAGCATGGGCTATGTTaGAGCCTCTTCCAGAACAGT +
Preference number: 4 (lower is better)
Translates to: HLILSHTNLSSFTDGMWPKHGLC*SLFQNS
Trigger: ACTGTTCTGGAAGAGGCTGCAACATAGCCCATGCTT...GGGCCACATTCCATCAGTGAAACTGGAAAGATTGGTGTGGCTGAGAATCAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR CCA 90 bp ATTTTATCAGCGTTCAACAACACCTTAATTGTTGACACTACAAGGTGGAATTGTGGAGGCGCTCGCTCATaGCAGCTGGCGGATGGAAGC +
Preference number: 4 (lower is better)
Translates to: ILSAFNNTLIVDTTRWNCGGARS*QLADGS
Trigger: GCTTCCATCCGCCAGCTGCCATGAGCGAGCGCCTCC...ACAATTCCACCTTGTAGTGTCAACAATTAAGGTGTTGTTGAACGCTGATAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR CCA 90 bp CATCTGATTCTCAGCCACACCAATCTTTCCAGTTTCACTGATGGAATGTGGCCCTTCACTGATGGAATGTaGCCCCCTAGTTACTGTTGG +
Preference number: 4 (lower is better)
Translates to: HLILSHTNLSSFTDGMWPFTDGM*PPSYCW
Trigger: CCAACAGTAACTAGGGGGCCACATTCCATCAGTGAA...GGGCCACATTCCATCAGTGAAACTGGAAAGATTGGTGTGGCTGAGAATCAGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR TCA 90 bp GCAGCCTCTTCCAGAACAGTTTCCACTGCAGTGATCTTTCAGTTCTGCCCACATCTCAAACCACTACCTTaGCATAGATTTGATACCCTC +
Preference number: 4 (lower is better)
Translates to: AASSRTVSTAVIFQFCPHLKPLP*HRFDTL
Trigger: GAGGGTATCAAATCTATGTCAAGGTAGTGGTTTGAG...ATGTGGGCAGAACTGAAAGATCACTGCAGTGGAAACTGTTCTGGAAGAGGCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR TCA 90 bp ACCATCCAGTCCCTAAGCATGGGCTATGTTGCAGCCTCTTCCAGAACAGTTTCCAGAACATCTACATACTaGGAGGTAGTATGGCAGTTA +
Preference number: 4 (lower is better)
Translates to: TIQSLSMGYVAASSRTVSRTSTY*EVVWQL
Trigger: TAACTGCCATACTACCTCTCAGTATGTAGATGTTCT...GGAAACTGTTCTGGAAGAGGCTGCAACATAGCCCATGCTTAGGGACTGGATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR TCA 90 bp GGTGCAGACTCTGGTGGAATAGTGACACAGAAGTTATCTGGGTATACAAGAATCGGGAGTGTGCTTCACTaGCAGTCTGAATTGGATCTG +
Preference number: 4 (lower is better)
Translates to: GADSGGIVTQKLSGYTRIGSVLH*QSELDL
Trigger: CAGATCCAATTCAGACTGTCAGTGAAGCACACTCCC...GATTCTTGTATACCCAGATAACTTCTGTGTCACTATTCCACCAGAGTCTGCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR TCA 90 bp GTTCTGGTGATGATGGTTTTATCTTCCCTTTTAGTTGGGTGGGAAGTAACAGAAGTGCCTCTGCTCATCTaGTTCTCAGCCACACCAATC +
Preference number: 4 (lower is better)
Translates to: VLVMMVLSSLLVGWEVTEVPLLI*FSATPI
Trigger: GATTGGTGTGGCTGAGAATCAGATGAGCAGAGGCAC...TTCTGTTACTTCCCACCCAACTAAAAGGGAAGATAAAACCATCATCACCAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR TCA 90 bp AAGGTGGAATTGTCAATGAGATCATGTAAGCTGCTGACTGACCAAGTTTGTAGGCAGTTTCCACTGCAGTaGTCTTTCAGTTCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: KVELSMRSCKLLTDQVCRQFPLQ*SFSSAH
Trigger: GTGGGCAGAACTGAAAGATCACTGCAGTGGAAACTG...CCTACAAACTTGGTCAGTCAGCAGCTTACATGATCTCATTGACAATTCCACCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR TCA 90 bp ACTAGAAGGTGTAAAAGATGCCCGCTGACACTACCAAGTAGCCTCTTAATAGAAGTAAAAGATGCCCGCTaGCACTACCAAGTAGCCTCT +
Preference number: 4 (lower is better)
Translates to: TRRCKRCPLTLPSSLLIEVKDAR*HYQVAS
Trigger: AGAGGCTACTTGGTAGTGTCAGCGGGCATCTTTTAC...TTCTATTAAGAGGCTACTTGGTAGTGTCAGCGGGCATCTTTTACACCTTCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR CCA 90 bp GTCAGTGAAGAAGACAACACGTCTGCACCTTCATTATTCAAACTTGGCTGGCTCAGGTGCAGACTCTGGTaGAATAGTGACACAGAAGTT +
Preference number: 4 (lower is better)
Translates to: VSEEDNTSAPSLFKLGWLRCRLW*NSDTEV
Trigger: AACTTCTGTGTCACTATTCCACCAGAGTCTGCACCT...GAGCCAGCCAAGTTTGAATAATGAAGGTGCAGACGTGTTGTCTTCTTCACTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR TCA 90 bp CAAATTCTAGTTTTGTCACAAAGGCTCATGCTGTTCCGTGTCCTCTTCAAATCTCAGACAGCTTGTCAGTaGAGAAGACAACACGTCTGC +
Preference number: 4 (lower is better)
Translates to: QILVLSQRLMLFRVLFKSQTACQ*RRQHVC
Trigger: GCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTG...AGATTTGAAGAGGACACGGAACAGCATGAGCCTTTGTGACAAAACTAGAATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR TCA 90 bp ACTAGAAGGTGTAAAAGATGCCCGCTGACACTACCAAGTAGCCTCTTAATAGAAAGGACAGGGTGGAGATaGGCTCTTGAATTTAGTAGG +
Preference number: 4 (lower is better)
Translates to: TRRCKRCPLTLPSSLLIERTGWR*ALEFSR
Trigger: CCTACTAAATTCAAGAGCTCATCTCCACCCTGTCCT...TTCTATTAAGAGGCTACTTGGTAGTGTCAGCGGGCATCTTTTACACCTTCTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR GCA 90 bp GTCAGTGAAGAAGACAACACGTCTGCACCTTCATTATTCAAACTTGGCTGGCTCCAGAACAGTTTCCACTaGAGTGATCTTTCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: VSEEDNTSAPSLFKLGWLQNSFH*SDLSVL
Trigger: CAGAACTGAAAGATCACTGCAGTGGAAACTGTTCTG...GAGCCAGCCAAGTTTGAATAATGAAGGTGCAGACGTGTTGTCTTCTTCACTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR GCA 90 bp AAGGTGGAATTGTCAATGAGATCATGTAAGCTGCTGACTGACCAAGTTTGTAGGAAGCATGGGCTATGTTaGAGCCTCTTCCAGAACAGT +
Preference number: 4 (lower is better)
Translates to: KVELSMRSCKLLTDQVCRKHGLC*SLFQNS
Trigger: ACTGTTCTGGAAGAGGCTGCAACATAGCCCATGCTT...CCTACAAACTTGGTCAGTCAGCAGCTTACATGATCTCATTGACAATTCCACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR CCA 90 bp ATTTTATCAGCGTTCAACAACACCTTAATTGTTGACACTACAAGGTGGAATTGTTCCTTCTCCTTTTCCTaGGACGGAGGCGCTCGCTCA +
Preference number: 4 (lower is better)
Translates to: ILSAFNNTLIVDTTRWNCSFSFS*DGGARS
Trigger: TGAGCGAGCGCCTCCGTCCCAGGAAAAGGAGAAGGA...ACAATTCCACCTTGTAGTGTCAACAATTAAGGTGTTGTTGAACGCTGATAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR CCA 90 bp AAGGTGGAATTGTCAATGAGATCATGTAAGCTGCTGACTGACCAAGTTTGTAGGCTGAGGTGCAGACTCTaGTGGAATAGTGACACAGAA +
Preference number: 4 (lower is better)
Translates to: KVELSMRSCKLLTDQVCRLRCRL*WNSDTE
Trigger: TTCTGTGTCACTATTCCACCAGAGTCTGCACCTCAG...CCTACAAACTTGGTCAGTCAGCAGCTTACATGATCTCATTGACAATTCCACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR TCA 90 bp ACTAGAAGGTGTAAAAGATGCCCGCTGACACTACCAAGTAGCCTCTTAATAGAAGATCATGTAAGCTGCTaGCTGACCAAGTTTGTAGGA +
Preference number: 4 (lower is better)
Translates to: TRRCKRCPLTLPSSLLIEDHVSC*LTKFVG
Trigger: TCCTACAAACTTGGTCAGTCAGCAGCTTACATGATC...TTCTATTAAGAGGCTACTTGGTAGTGTCAGCGGGCATCTTTTACACCTTCTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR GCA 90 bp ACTAGAAGGTGTAAAAGATGCCCGCTGACACTACCAAGTAGCCTCTTAATAGAAAGAAGGTGTAAAAGATaGCCGCTGACACTACCAAGT +
Preference number: 4 (lower is better)
Translates to: TRRCKRCPLTLPSSLLIERRCKR*PLTLPS
Trigger: ACTTGGTAGTGTCAGCGGGCATCTTTTACACCTTCT...TTCTATTAAGAGGCTACTTGGTAGTGTCAGCGGGCATCTTTTACACCTTCTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
3UTR CAA 72 bp TTTTCCCAAGACAGTCCTCATTTCCAAATTCTAGTTTaGTCACAAAGGCTCATGCTGTTCCGTGTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: FSQDSPHFQILV*SQRLMLFRVLF
Trigger: GAAGAGGACACGGAACAGCATGAGCCTTTGTGACAAAACTAGAATTTGGAAATGAGGACTGTCTTGGGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR TCA 90 bp CACTACAAGGTGGAATTGTCAATGAGATCATGTAAGCTGCTGACTGACCAAGTTAGAACATCTACATACTaGGAGGTAGTATGGCAGTTA +
Preference number: 4 (lower is better)
Translates to: HYKVELSMRSCKLLTDQVRTSTY*EVVWQL
Trigger: TAACTGCCATACTACCTCTCAGTATGTAGATGTTCT...AACTTGGTCAGTCAGCAGCTTACATGATCTCATTGACAATTCCACCTTGTAGTG
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR TCA 90 bp CAAATTCTAGTTTTGTCACAAAGGCTCATGCTGTTCCGTGTCCTCTTCAAATCTGCTTCACTGACAGTCTaGATTGGATCTGATTGTTCT +
Preference number: 4 (lower is better)
Translates to: QILVLSQRLMLFRVLFKSASLTV*IGSDCS
Trigger: AGAACAATCAGATCCAATTCAGACTGTCAGTGAAGC...AGATTTGAAGAGGACACGGAACAGCATGAGCCTTTGTGACAAAACTAGAATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR TCA 90 bp GTTCTGGTGATGATGGTTTTATCTTCCCTTTTAGTTGGGTGGGAAGTAACAGAAGCTTCACTGACAGTCTaGATTGGATCTGATTGTTCT +
Preference number: 4 (lower is better)
Translates to: VLVMMVLSSLLVGWEVTEASLTV*IGSDCS
Trigger: AGAACAATCAGATCCAATTCAGACTGTCAGTGAAGC...TTCTGTTACTTCCCACCCAACTAAAAGGGAAGATAAAACCATCATCACCAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR TCA 90 bp AAGGTGGAATTGTCAATGAGATCATGTAAGCTGCTGACTGACCAAGTTTGTAGGCAACACCTTAATTGTTaGCACTACAAGGTGGAATTG +
Preference number: 4 (lower is better)
Translates to: KVELSMRSCKLLTDQVCRQHLNC*HYKVEL
Trigger: CAATTCCACCTTGTAGTGTCAACAATTAAGGTGTTG...CCTACAAACTTGGTCAGTCAGCAGCTTACATGATCTCATTGACAATTCCACCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR GCA 90 bp ATTTTATCAGCGTTCAACAACACCTTAATTGTTGACACTACAAGGTGGAATTGTCAGAAGGCAAGAAACTaGCGGCACATCATGTCAGAG +
Preference number: 4 (lower is better)
Translates to: ILSAFNNTLIVDTTRWNCQKARN*RHIMSE
Trigger: CTCTGACATGATGTGCCGGCAGTTTCTTGCCTTCTG...ACAATTCCACCTTGTAGTGTCAACAATTAAGGTGTTGTTGAACGCTGATAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR CCA 90 bp CACTACAAGGTGGAATTGTCAATGAGATCATGTAAGCTGCTGACTGACCAAGTTTCCCTTTTAGTTGGGTaGGAAGTAACAGAAAATTTG +
Preference number: 4 (lower is better)
Translates to: HYKVELSMRSCKLLTDQVSLLVG*EVTENL
Trigger: CAAATTTTCTGTTACTTCCCACCCAACTAAAAGGGA...AACTTGGTCAGTCAGCAGCTTACATGATCTCATTGACAATTCCACCTTGTAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR TCA 90 bp CAAATTCTAGTTTTGTCACAAAGGCTCATGCTGTTCCGTGTCCTCTTCAAATCTATTCAACACACAGAATaGGTTTTCCTCAAACCACTA +
Preference number: 4 (lower is better)
Translates to: QILVLSQRLMLFRVLFKSIQHTE*VFLKPL
Trigger: TAGTGGTTTGAGGAAAACTCATTCTGTGTGTTGAAT...AGATTTGAAGAGGACACGGAACAGCATGAGCCTTTGTGACAAAACTAGAATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR TCA 90 bp CAAATTCTAGTTTTGTCACAAAGGCTCATGCTGTTCCGTGTCCTCTTCAAATCTAAGGTTTTACTAGCTTaGGCTACTAGAAGGTGTAAA +
Preference number: 4 (lower is better)
Translates to: QILVLSQRLMLFRVLFKSKVLLA*ATRRCK
Trigger: TTTACACCTTCTAGTAGCTCAAGCTAGTAAAACCTT...AGATTTGAAGAGGACACGGAACAGCATGAGCCTTTGTGACAAAACTAGAATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR GCA 90 bp AAGGTGGAATTGTCAATGAGATCATGTAAGCTGCTGACTGACCAAGTTTGTAGGTTTCACAATACTTGTTaGTTTAGACATCAGTTCAGG +
Preference number: 4 (lower is better)
Translates to: KVELSMRSCKLLTDQVCRFHNTC*FRHQFR
Trigger: CCTGAACTGATGTCTAAAGCAACAAGTATTGTGAAA...CCTACAAACTTGGTCAGTCAGCAGCTTACATGATCTCATTGACAATTCCACCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR GCA 90 bp ACTAGAAGGTGTAAAAGATGCCCGCTGACACTACCAAGTAGCCTCTTAATAGAACAGCATCGAGTTGTTTaGTTTATTGTTAGACACAAT +
Preference number: 4 (lower is better)
Translates to: TRRCKRCPLTLPSSLLIEQHRVV*FIVRHN
Trigger: ATTGTGTCTAACAATAAAGCAAACAACTCGATGCTG...TTCTATTAAGAGGCTACTTGGTAGTGTCAGCGGGCATCTTTTACACCTTCTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR CCA 90 bp CAAATTCTAGTTTTGTCACAAAGGCTCATGCTGTTCCGTGTCCTCTTCAAATCTATCTTCCCTTTTAGTTaGGTGGGAAGTAACAGAAAA +
Preference number: 4 (lower is better)
Translates to: QILVLSQRLMLFRVLFKSIFPFS*VGSNRK
Trigger: TTTTCTGTTACTTCCCACCCAACTAAAAGGGAAGAT...AGATTTGAAGAGGACACGGAACAGCATGAGCCTTTGTGACAAAACTAGAATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS CCA 90 bp CGCCACGCCCACCCCCTCGGGCCTTGGCTCTCGCAGCCGCTCGGGTaGACGCAGCCGGTGGCGAGTACCCCTCAGTCGGACCCGTACCAC +
Preference number: 5 (lower is better)
Translates to: RHAHPLGPWLSQPLG*TQPVASTPQSDPYH
Trigger: GTGGTACGGGTCCGACTGAGGGGTACTCGCCACCGGCTGCGTCCACCCGAGCGGCTGCGAGAGCCAAGGCCCGAGGGGGTGGGCGTGGCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000403627.7
ENST00000405159.7
ENST00000581110.1
ENST00000583024.1
CDS CCA 90 bp AGGGGGTTGTGTTTCGGCGGCCGCCACGCCCACCCCCTCGGGCCTTaGCTCTCGCAGCCGCTCGGGTGGACGCAGCCGGTGGCGAGTACC +
Preference number: 5 (lower is better)
Translates to: RGLCFGGRHAHPLGP*LSQPLGWTQPVAST
Trigger: GGTACTCGCCACCGGCTGCGTCCACCCGAGCGGCTGCGAGAGCCAAGGCCCGAGGGGGTGGGCGTGGCGGCCGCCGAAACACAACCCCCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000403627.7
ENST00000405159.7
ENST00000581110.1
ENST00000583024.1
CDS-3UTR CAA 90 bp GCACAGCGCGGACTGCTCGGGCACGGGCTGAGGCGTGTTAGGGCTGGATCCGGCCCACCCCCTCGGGCCTaGGCTCTCGCAGCCGCTCGG +
Preference number: 5 (lower is better)
Translates to: AQRGLLGHGLRRVRAGSGPPPRA*ALAAAR
Trigger: CCGAGCGGCTGCGAGAGCCAAGGCCCGAGGGGGTGG...GCCGGATCCAGCCCTAACACGCCTCAGCCCGTGCCCGAGCAGTCCGCGCTGTGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000581110.1
ENST00000583024.1
CDS-3UTR CAA 90 bp GGACTGCTCGGGCACGGGCTGAGGCGTGTTAGGGCTGGATCCGGCCATGGTCTGCCACCCCCTCGGGCCTaGGCTCTCGCAGCCGCTCGG +
Preference number: 5 (lower is better)
Translates to: GLLGHGLRRVRAGSGHGLPPPRA*ALAAAR
Trigger: CCGAGCGGCTGCGAGAGCCAAGGCCCGAGGGGGTGG...CAGACCATGGCCGGATCCAGCCCTAACACGCCTCAGCCCGTGCCCGAGCAGTCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000581110.1
ENST00000583024.1
CDS CCA 90 bp CCCTCGGGCCTTGGCTCTCGCAGCCGCTCGGGTGGACGCAGCCGGTaGCGAGTACCCCTCAGTCGGACCCGTACCACCACTACTTCCGGC +
Preference number: 5 (lower is better)
Translates to: PSGLGSRSRSGGRSR*RVPLSRTRTTTTSG
Trigger: GCCGGAAGTAGTGGTGGTACGGGTCCGACTGAGGGGTACTCGCCACCGGCTGCGTCCACCCGAGCGGCTGCGAGAGCCAAGGCCCGAGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403627.7
ENST00000405159.7
ENST00000581110.1
ENST00000583024.1
CDS CCA 90 bp CCAGGAATCCTGGGACGGAGGCGCTCGCTCATGGCAGCTGGCGGATaGAAGCTACGCGGCGCCGCTCCGCGAAGAGAGGGAACAGAGGGG +
Preference number: 5 (lower is better)
Translates to: PGILGRRRSLMAAGG*KLRGAAPRREGTEG
Trigger: CCCCTCTGTTCCCTCTCTTCGCGGAGCGGCGCCGCGTAGCTTCCATCCGCCAGCTGCCATGAGCGAGCGCCTCCGTCCCAGGATTCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583024.1
CDS CCA 90 bp CTCCTTTTCCTGGGACGGAGGCGCTCGCTCATGGCAGCTGGCGGATaGAAGCTACGCGGCGCCGCTCCGCGAAGAGAGGGAACAGAGGGG +
Preference number: 5 (lower is better)
Translates to: LLFLGRRRSLMAAGG*KLRGAAPRREGTEG
Trigger: CCCCTCTGTTCCCTCTCTTCGCGGAGCGGCGCCGCGTAGCTTCCATCCGCCAGCTGCCATGAGCGAGCGCCTCCGTCCCAGGAAAAGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS CCA 90 bp CTGTGTCCCAGGAATCCTGGGACGGAGGCGCTCGCTCATGGCAGCTaGCGGATGGAAGCTACGCGGCGCCGCTCCGCGAAGAGAGGGAAC +
Preference number: 5 (lower is better)
Translates to: LCPRNPGTEALAHGS*RMEATRRRSAKRGN
Trigger: GTTCCCTCTCTTCGCGGAGCGGCGCCGCGTAGCTTCCATCCGCCAGCTGCCATGAGCGAGCGCCTCCGTCCCAGGATTCCTGGGACACAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583024.1
CDS CCA 90 bp TGTCACTGCCTGAAGACTGGGACGGAGGCGCTCGCTCATGGCAGCTaGCGGATGGAAGCTACGCGGCGCCGCTCCGCGAAGAGAGGGAAC +
Preference number: 5 (lower is better)
Translates to: CHCLKTGTEALAHGS*RMEATRRRSAKRGN
Trigger: GTTCCCTCTCTTCGCGGAGCGGCGCCGCGTAGCTTCCATCCGCCAGCTGCCATGAGCGAGCGCCTCCGTCCCAGTCTTCAGGCAGTGACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581110.1
CDS CCA 90 bp GAAGACTCTGTGTCCCAGGAATCCTGGGACGGAGGCGCTCGCTCATaGCAGCTGGCGGATGGAAGCTACGCGGCGCCGCTCCGCGAAGAG +
Preference number: 5 (lower is better)
Translates to: EDSVSQESWDGGARS*QLADGSYAAPLREE
Trigger: CTCTTCGCGGAGCGGCGCCGCGTAGCTTCCATCCGCCAGCTGCCATGAGCGAGCGCCTCCGTCCCAGGATTCCTGGGACACAGAGTCTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583024.1
CDS-3UTR CAA 90 bp GGACTGCTCGGGCACGGGCTGAGGCGTGTTAGGGCTGGATCCGGCCATGGTCTGGTGGAAGTAGAGGCCTaGGCACAGCGCGGACTGCTC +
Preference number: 5 (lower is better)
Translates to: GLLGHGLRRVRAGSGHGLVEVEA*AQRGLL
Trigger: GAGCAGTCCGCGCTGTGCCAAGGCCTCTACTTCCAC...CAGACCATGGCCGGATCCAGCCCTAACACGCCTCAGCCCGTGCCCGAGCAGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581110.1
CDS-3UTR CAA 90 bp TTCTCAGCTCCGCTTGTGTGTGCCGTGTGGACTCCGAGTGGCGTCGCGCGGAGGGTGGAAGTAGAGGCCTaGGCACAGCGCGGACTGCTC +
Preference number: 5 (lower is better)
Translates to: FSAPLVCAVWTPSGVARRVEVEA*AQRGLL
Trigger: GAGCAGTCCGCGCTGTGCCAAGGCCTCTACTTCCAC...CCTCCGCGCGACGCCACTCGGAGTCCACACGGCACACACAAGCGGAGCTGAGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS CCA 90 bp ATTCCTTCTCCTTTTCCTGGGACGGAGGCGCTCGCTCATGGCAGCTaGCGGATGGAAGCTACGCGGCGCCGCTCCGCGAAGAGAGGGAAC +
Preference number: 5 (lower is better)
Translates to: IPSPFPGTEALAHGS*RMEATRRRSAKRGN
Trigger: GTTCCCTCTCTTCGCGGAGCGGCGCCGCGTAGCTTCCATCCGCCAGCTGCCATGAGCGAGCGCCTCCGTCCCAGGAAAAGGAGAAGGAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR CAA 90 bp CCGGCACGCTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGAGGGAACAGAGGGGGTaGTGTTTCGGCGGCCGCCAC +
Preference number: 5 (lower is better)
Translates to: PARSTAGDPTVPGSLFRQREQRG*CFGGRH
Trigger: GTGGCGGCCGCCGAAACACAACCCCCTCTGTTCCCT...CTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGTGCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR CAA 90 bp TTCTCAGCTCCGCTTGTGTGTGCCGTGTGGACTCCGAGTGGCGTCGCGCGGAGGGCTTCTCAGCTCCGCTaGTGTGTGCCGTGTGGACTC +
Preference number: 5 (lower is better)
Translates to: FSAPLVCAVWTPSGVARRASQLR*CVPCGL
Trigger: GAGTCCACACGGCACACACAAGCGGAGCTGAGAAGC...CCTCCGCGCGACGCCACTCGGAGTCCACACGGCACACACAAGCGGAGCTGAGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS TCA 90 bp CTCGGTGCTGTAGGCTGTGGAAGTGGGCCTCCCTCAGGGTCTGGTTaGTGTGGAAGTAGAGGCCTTGGCACAGCGCGGACTGCTCGGGCA +
Preference number: 5 (lower is better)
Translates to: LGAVGCGSGPPSGSG*CGSRGLGTARTARA
Trigger: TGCCCGAGCAGTCCGCGCTGTGCCAAGGCCTCTACTTCCACATCAACCAGACCCTGAGGGAGGCCCACTTCCACAGCCTACAGCACCGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403627.7
ENST00000405159.7
ENST00000580032.1
ENST00000583178.5
CDS TCA 90 bp GATGCTGCTGCTGCTGCTGCTGCTGCTCCCACCACTGTCACTGCCTaGAGACTCTGTGTCCCAGGAATCCTGGGACGGAGGCGCTCGCTC +
Preference number: 5 (lower is better)
Translates to: DAAAAAAAAPTTVTA*RLCVPGILGRRRSL
Trigger: GAGCGAGCGCCTCCGTCCCAGGATTCCTGGGACACAGAGTCTTCAGGCAGTGACAGTGGTGGGAGCAGCAGCAGCAGCAGCAGCAGCATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583024.1
CDS-3UTR CAA 90 bp CCGGCACGCTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGGTGGAAGTAGAGGCCTaGGCACAGCGCGGACTGCTC +
Preference number: 5 (lower is better)
Translates to: PARSTAGDPTVPGSLFRQVEVEA*AQRGLL
Trigger: GAGCAGTCCGCGCTGTGCCAAGGCCTCTACTTCCAC...CTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGTGCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR CAA 90 bp ACCATCCAGTCCCTAAGCATGGGCTATGTTGCAGCCTCTTCCAGAACAGTTTCCCCACCCCCTCGGGCCTaGGCTCTCGCAGCCGCTCGG +
Preference number: 5 (lower is better)
Translates to: TIQSLSMGYVAASSRTVSPPPRA*ALAAAR
Trigger: CCGAGCGGCTGCGAGAGCCAAGGCCCGAGGGGGTGG...GGAAACTGTTCTGGAAGAGGCTGCAACATAGCCCATGCTTAGGGACTGGATGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR CAA 90 bp CCGGCACGCTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGGCTTCTCAGCTCCGCTaGTGTGTGCCGTGTGGACTC +
Preference number: 5 (lower is better)
Translates to: PARSTAGDPTVPGSLFRQASQLR*CVPCGL
Trigger: GAGTCCACACGGCACACACAAGCGGAGCTGAGAAGC...CTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGTGCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR CAA 90 bp TCCGCTTGTGTGTGCCGTGTGGACTCCGAGTGGCGTCGCGCGGAGGGCGAGTGGCACTACAAGGTGGAATaGTCAATGAGATCATGTAAG +
Preference number: 5 (lower is better)
Translates to: SACVCRVDSEWRRAEGEWHYKVE*SMRSCK
Trigger: CTTACATGATCTCATTGACAATTCCACCTTGTAGTG...CCACTCGCCCTCCGCGCGACGCCACTCGGAGTCCACACGGCACACACAAGCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS GCA 90 bp ATATCAAATCTGCACAGCGCTGTCCCTTCACAGAAGGCAAGAAACTaGCGGCACATCATGTCAGAGGCCGCCCTCGGTGCTGTAGGCTGT +
Preference number: 5 (lower is better)
Translates to: ISNLHSAVPSQKARN*RHIMSEAALGAVGC
Trigger: ACAGCCTACAGCACCGAGGGCGGCCTCTGACATGATGTGCCGGCAGTTTCTTGCCTTCTGTGAAGGGACAGCGCTGTGCAGATTTGATAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR CAA 90 bp TTCTCAGCTCCGCTTGTGTGTGCCGTGTGGACTCCGAGTGGCGTCGCGCGGAGGTTCCAAATTCTAGTTTaGTCACAAAGGCTCATGCTG +
Preference number: 5 (lower is better)
Translates to: FSAPLVCAVWTPSGVARRFQILV*SQRLML
Trigger: CAGCATGAGCCTTTGTGACAAAACTAGAATTTGGAA...CCTCCGCGCGACGCCACTCGGAGTCCACACGGCACACACAAGCGGAGCTGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR CAA 90 bp TTCTCAGCTCCGCTTGTGTGTGCCGTGTGGACTCCGAGTGGCGTCGCGCGGAGGTCTTACAGCATCGAGTaGTTTGCTTTATTGTTAGAC +
Preference number: 5 (lower is better)
Translates to: FSAPLVCAVWTPSGVARRSYSIE*FALLLD
Trigger: GTCTAACAATAAAGCAAACAACTCGATGCTGTAAGA...CCTCCGCGCGACGCCACTCGGAGTCCACACGGCACACACAAGCGGAGCTGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR CAA 90 bp CCTCTGACTAGAGCCATCGTGCTTCTCAGCTCCGCTTGTGTGTGCCGTGTGGACCCTTGTTCAGACAGCTaGTCAGTGAAGAAGACAACA +
Preference number: 5 (lower is better)
Translates to: PLTRAIVLLSSACVCRVDPCSDS*SVKKTT
Trigger: TGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGG...GTCCACACGGCACACACAAGCGGAGCTGAGAAGCACGATGGCTCTAGTCAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR CAA 90 bp ATTTTATCAGCGTTCAACAACACCTTAATTGTTGACACTACAAGGTGGAATTGTCCACCCCCTCGGGCCTaGGCTCTCGCAGCCGCTCGG +
Preference number: 5 (lower is better)
Translates to: ILSAFNNTLIVDTTRWNCPPPRA*ALAAAR
Trigger: CCGAGCGGCTGCGAGAGCCAAGGCCCGAGGGGGTGG...ACAATTCCACCTTGTAGTGTCAACAATTAAGGTGTTGTTGAACGCTGATAAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR CAA 90 bp CCTCTGACTAGAGCCATCGTGCTTCTCAGCTCCGCTTGTGTGTGCCGTGTGGACAACCCGGCACTATCATaGTACTTGTTTGGAGAAAAT +
Preference number: 5 (lower is better)
Translates to: PLTRAIVLLSSACVCRVDNPALS*YLFGEN
Trigger: ATTTTCTCCAAACAAGTACAATGATAGTGCCGGGTT...GTCCACACGGCACACACAAGCGGAGCTGAGAAGCACGATGGCTCTAGTCAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR CAA 90 bp CATCTGATTCTCAGCCACACCAATCTTTCCAGTTTCACTGATGGAATGTGGCCCACAGTTCCTGGCTCCTaGTTCAGACAGCTTGTCAGT +
Preference number: 5 (lower is better)
Translates to: HLILSHTNLSSFTDGMWPTVPGS*FRQLVS
Trigger: ACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGT...GGGCCACATTCCATCAGTGAAACTGGAAAGATTGGTGTGGCTGAGAATCAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR CAA 90 bp CATCTGATTCTCAGCCACACCAATCTTTCCAGTTTCACTGATGGAATGTGGCCCGACGCGCAGAACGCTTaGTTTCCTCTTAGTCTGTTT +
Preference number: 5 (lower is better)
Translates to: HLILSHTNLSSFTDGMWPDAQNA*FPLSLF
Trigger: AAACAGACTAAGAGGAAACAAAGCGTTCTGCGCGTC...GGGCCACATTCCATCAGTGAAACTGGAAAGATTGGTGTGGCTGAGAATCAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405159.7
CDS-3UTR CAA 90 bp ACCATCCAGTCCCTAAGCATGGGCTATGTTGCAGCCTCTTCCAGAACAGTTTCCCACTACAAGGTGGAATaGTCAATGAGATCATGTAAG +
Preference number: 5 (lower is better)
Translates to: TIQSLSMGYVAASSRTVSHYKVE*SMRSCK
Trigger: CTTACATGATCTCATTGACAATTCCACCTTGTAGTG...GGAAACTGTTCTGGAAGAGGCTGCAACATAGCCCATGCTTAGGGACTGGATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR CAA 90 bp CACTACAAGGTGGAATTGTCAATGAGATCATGTAAGCTGCTGACTGACCAAGTTACAGTTCCTGGCTCCTaGTTCAGACAGCTTGTCAGT +
Preference number: 5 (lower is better)
Translates to: HYKVELSMRSCKLLTDQVTVPGS*FRQLVS
Trigger: ACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGT...AACTTGGTCAGTCAGCAGCTTACATGATCTCATTGACAATTCCACCTTGTAGTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR CAA 90 bp AAGGTGGAATTGTCAATGAGATCATGTAAGCTGCTGACTGACCAAGTTTGTAGGCCTTGTTCAGACAGCTaGTCAGTGAAGAAGACAACA +
Preference number: 5 (lower is better)
Translates to: KVELSMRSCKLLTDQVCRPCSDS*SVKKTT
Trigger: TGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGG...CCTACAAACTTGGTCAGTCAGCAGCTTACATGATCTCATTGACAATTCCACCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR CAA 90 bp CATCTGATTCTCAGCCACACCAATCTTTCCAGTTTCACTGATGGAATGTGGCCCTCTTACAGCATCGAGTaGTTTGCTTTATTGTTAGAC +
Preference number: 5 (lower is better)
Translates to: HLILSHTNLSSFTDGMWPSYSIE*FALLLD
Trigger: GTCTAACAATAAAGCAAACAACTCGATGCTGTAAGA...GGGCCACATTCCATCAGTGAAACTGGAAAGATTGGTGTGGCTGAGAATCAGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR CAA 90 bp GGTGCAGACTCTGGTGGAATAGTGACACAGAAGTTATCTGGGTATACAAGAATCAACCCGGCACTATCATaGTACTTGTTTGGAGAAAAT +
Preference number: 5 (lower is better)
Translates to: GADSGGIVTQKLSGYTRINPALS*YLFGEN
Trigger: ATTTTCTCCAAACAAGTACAATGATAGTGCCGGGTT...GATTCTTGTATACCCAGATAACTTCTGTGTCACTATTCCACCAGAGTCTGCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR CAA 90 bp AAGGTGGAATTGTCAATGAGATCATGTAAGCTGCTGACTGACCAAGTTTGTAGGTTCCAAATTCTAGTTTaGTCACAAAGGCTCATGCTG +
Preference number: 5 (lower is better)
Translates to: KVELSMRSCKLLTDQVCRFQILV*SQRLML
Trigger: CAGCATGAGCCTTTGTGACAAAACTAGAATTTGGAA...CCTACAAACTTGGTCAGTCAGCAGCTTACATGATCTCATTGACAATTCCACCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS-3UTR CAA 90 bp CAAATTCTAGTTTTGTCACAAAGGCTCATGCTGTTCCGTGTCCTCTTCAAATCTTACCTTGACATAGATTaGATACCCTCCCTCAAAAGA +
Preference number: 5 (lower is better)
Translates to: QILVLSQRLMLFRVLFKSYLDID*IPSLKR
Trigger: TCTTTTGAGGGAGGGTATCAAATCTATGTCAAGGTA...AGATTTGAAGAGGACACGGAACAGCATGAGCCTTTGTGACAAAACTAGAATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS CCA 72 bp TGTTTCGGCGGCCGCCACGCCCACCCCCTCGGGCCTTaGCTCTCGCAGCCGCTCGGGTGGACGCAGCCGGTG +
Preference number: 6 (lower is better)
Translates to: CFGGRHAHPLGP*LSQPLGWTQPV
Trigger: CACCGGCTGCGTCCACCCGAGCGGCTGCGAGAGCCAAGGCCCGAGGGGGTGGGCGTGGCGGCCGCCGAAACA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000403627.7
ENST00000405159.7
ENST00000581110.1
ENST00000583024.1
CDS CAA 72 bp GTGTTTCGGCGGCCGCCACGCCCACCCCCTCGGGCCTaGGCTCTCGCAGCCGCTCGGGTGGACGCAGCCGGT +
Preference number: 6 (lower is better)
Translates to: VFRRPPRPPPRA*ALAAARVDAAG
Trigger: ACCGGCTGCGTCCACCCGAGCGGCTGCGAGAGCCAAGGCCCGAGGGGGTGGGCGTGGCGGCCGCCGAAACAC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000403627.7
ENST00000405159.7
ENST00000581110.1
ENST00000583024.1
CDS CAA 72 bp GCGGCGCCGCTCCGCGAAGAGAGGGAACAGAGGGGGTaGTGTTTCGGCGGCCGCCACGCCCACCCCCTCGGG +
Preference number: 6 (lower is better)
Translates to: AAPLREEREQRG*CFGGRHAHPLG
Trigger: CCCGAGGGGGTGGGCGTGGCGGCCGCCGAAACACAACCCCCTCTGTTCCCTCTCTTCGCGGAGCGGCGCCGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000403627.7
ENST00000405159.7
ENST00000581110.1
ENST00000583024.1
CDS CAA 90 bp GAGGGGGTTGTGTTTCGGCGGCCGCCACGCCCACCCCCTCGGGCCTaGGCTCTCGCAGCCGCTCGGGTGGACGCAGCCGGTGGCGAGTAC +
Preference number: 6 (lower is better)
Translates to: EGVVFRRPPRPPPRA*ALAAARVDAAGGEY
Trigger: GTACTCGCCACCGGCTGCGTCCACCCGAGCGGCTGCGAGAGCCAAGGCCCGAGGGGGTGGGCGTGGCGGCCGCCGAAACACAACCCCCTC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000403627.7
ENST00000405159.7
ENST00000581110.1
ENST00000583024.1
CDS CCA 72 bp CACCCCCTCGGGCCTTGGCTCTCGCAGCCGCTCGGGTaGACGCAGCCGGTGGCGAGTACCCCTCAGTCGGAC +
Preference number: 6 (lower is better)
Translates to: HPLGPWLSQPLG*TQPVASTPQSD
Trigger: GTCCGACTGAGGGGTACTCGCCACCGGCTGCGTCCACCCGAGCGGCTGCGAGAGCCAAGGCCCGAGGGGGTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000403627.7
ENST00000405159.7
ENST00000581110.1
ENST00000583024.1
CDS CAA 90 bp GGAAGCTACGCGGCGCCGCTCCGCGAAGAGAGGGAACAGAGGGGGTaGTGTTTCGGCGGCCGCCACGCCCACCCCCTCGGGCCTTGGCTC +
Preference number: 6 (lower is better)
Translates to: GSYAAPLREEREQRG*CFGGRHAHPLGPWL
Trigger: GAGCCAAGGCCCGAGGGGGTGGGCGTGGCGGCCGCCGAAACACAACCCCCTCTGTTCCCTCTCTTCGCGGAGCGGCGCCGCGTAGCTTCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000403627.7
ENST00000405159.7
ENST00000581110.1
ENST00000583024.1
CDS CCA 72 bp CTGGGACGGAGGCGCTCGCTCATGGCAGCTGGCGGATaGAAGCTACGCGGCGCCGCTCCGCGAAGAGAGGGA +
Preference number: 6 (lower is better)
Translates to: LGRRRSLMAAGG*KLRGAAPRREG
Trigger: TCCCTCTCTTCGCGGAGCGGCGCCGCGTAGCTTCCATCCGCCAGCTGCCATGAGCGAGCGCCTCCGTCCCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403627.7
ENST00000405159.7
ENST00000581110.1
ENST00000583024.1
CDS GCA 72 bp CATGTCGCTGCCGCCGTGGTACCGCCCTCTCGCGGCTaGGCAGTGGCACCATCCCAACCGCACCGACTGGTA +
Preference number: 6 (lower is better)
Translates to: HVAAAVVPPSRG*AVAPSQPHRLV
Trigger: TACCAGTCGGTGCGGTTGGGATGGTGCCACTGCGCAGCCGCGAGAGGGCGGTACCACGGCGGCAGCGACATG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581110.1
CDS CCA 72 bp CTTGGCTCTCGCAGCCGCTCGGGTGGACGCAGCCGGTaGCGAGTACCCCTCAGTCGGACCCGTACCACCACT +
Preference number: 6 (lower is better)
Translates to: LGSRSRSGGRSR*RVPLSRTRTTT
Trigger: AGTGGTGGTACGGGTCCGACTGAGGGGTACTCGCCACCGGCTGCGTCCACCCGAGCGGCTGCGAGAGCCAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403627.7
ENST00000405159.7
ENST00000581110.1
ENST00000583024.1
CDS CCA 72 bp CCTTTTCCTGGGACGGAGGCGCTCGCTCATGGCAGCTaGCGGATGGAAGCTACGCGGCGCCGCTCCGCGAAG +
Preference number: 6 (lower is better)
Translates to: PFPGTEALAHGS*RMEATRRRSAK
Trigger: CTTCGCGGAGCGGCGCCGCGTAGCTTCCATCCGCCAGCTGCCATGAGCGAGCGCCTCCGTCCCAGGAAAAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS CCA 72 bp CTGAAGACTGGGACGGAGGCGCTCGCTCATGGCAGCTaGCGGATGGAAGCTACGCGGCGCCGCTCCGCGAAG +
Preference number: 6 (lower is better)
Translates to: LKTGTEALAHGS*RMEATRRRSAK
Trigger: CTTCGCGGAGCGGCGCCGCGTAGCTTCCATCCGCCAGCTGCCATGAGCGAGCGCCTCCGTCCCAGTCTTCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581110.1
CDS CCA 72 bp AGGAATCCTGGGACGGAGGCGCTCGCTCATGGCAGCTaGCGGATGGAAGCTACGCGGCGCCGCTCCGCGAAG +
Preference number: 6 (lower is better)
Translates to: RNPGTEALAHGS*RMEATRRRSAK
Trigger: CTTCGCGGAGCGGCGCCGCGTAGCTTCCATCCGCCAGCTGCCATGAGCGAGCGCCTCCGTCCCAGGATTCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583024.1
CDS CCA 72 bp GTGTCCCAGGAATCCTGGGACGGAGGCGCTCGCTCATaGCAGCTGGCGGATGGAAGCTACGCGGCGCCGCTC +
Preference number: 6 (lower is better)
Translates to: VSQESWDGGARS*QLADGSYAAPL
Trigger: GAGCGGCGCCGCGTAGCTTCCATCCGCCAGCTGCCATGAGCGAGCGCCTCCGTCCCAGGATTCCTGGGACAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583024.1
CDS TCA 72 bp AGCTGCCTTCCGGCCCGCTGGCCCTGTCCGGGCTATTaGTGCTGCTGCTGCTGCTGCTGCTGCTCCCACCAC +
Preference number: 6 (lower is better)
Translates to: SCLPARWPCPGY*CCCCCCCCSHH
Trigger: GTGGTGGGAGCAGCAGCAGCAGCAGCAGCAGCATCAATAGCCCGGACAGGGCCAGCGGGCCGGAAGGCAGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000403627.7
ENST00000405159.7
ENST00000579872.1
ENST00000580032.1
ENST00000581110.1
ENST00000583024.1
ENST00000583178.5
CDS CCA 72 bp TCACTGCCTGAAGACTGGGACGGAGGCGCTCGCTCATaGCAGCTGGCGGATGGAAGCTACGCGGCGCCGCTC +
Preference number: 6 (lower is better)
Translates to: SLPEDWDGGARS*QLADGSYAAPL
Trigger: GAGCGGCGCCGCGTAGCTTCCATCCGCCAGCTGCCATGAGCGAGCGCCTCCGTCCCAGTCTTCAGGCAGTGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581110.1
CDS CCA 72 bp TCCTTCTCCTTTTCCTGGGACGGAGGCGCTCGCTCATaGCAGCTGGCGGATGGAAGCTACGCGGCGCCGCTC +
Preference number: 6 (lower is better)
Translates to: SFSFSWDGGARS*QLADGSYAAPL
Trigger: GAGCGGCGCCGCGTAGCTTCCATCCGCCAGCTGCCATGAGCGAGCGCCTCCGTCCCAGGAAAAGGAGAAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS GCA 72 bp AAACTGCCGGCACATCATGTCAGAGGCCGCCCTCGGTaGTGTAGGCTGTGGAAGTGGGCCTCCCTCAGGGTC +
Preference number: 6 (lower is better)
Translates to: KLPAHHVRGRPR*CRLWKWASLRV
Trigger: GACCCTGAGGGAGGCCCACTTCCACAGCCTACAGCACCGAGGGCGGCCTCTGACATGATGTGCCGGCAGTTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403627.7
ENST00000405159.7
ENST00000580032.1
ENST00000583178.5
CDS TCA 72 bp GCTGCTGCTGCTGCTGCTCCCACCACTGTCACTGCCTaGAGACTCTGTGTCCCAGGAATCCTGGGACGGAGG +
Preference number: 6 (lower is better)
Translates to: AAAAAAPTTVTA*RLCVPGILGRR
Trigger: CCTCCGTCCCAGGATTCCTGGGACACAGAGTCTTCAGGCAGTGACAGTGGTGGGAGCAGCAGCAGCAGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583024.1
CDS CCA 72 bp CTGTCACTGCCTGAAGACTCTGTGTCCCAGGAATCCTaGGACGGAGGCGCTCGCTCATGGCAGCTGGCGGAT +
Preference number: 6 (lower is better)
Translates to: LSLPEDSVSQES*DGGARSWQLAD
Trigger: ATCCGCCAGCTGCCATGAGCGAGCGCCTCCGTCCCAGGATTCCTGGGACACAGAGTCTTCAGGCAGTGACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583024.1
CDS TCA 72 bp GTAGGCTGTGGAAGTGGGCCTCCCTCAGGGTCTGGTTaGTGTGGAAGTAGAGGCCTTGGCACAGCGCGGACT +
Preference number: 6 (lower is better)
Translates to: VGCGSGPPSGSG*CGSRGLGTART
Trigger: AGTCCGCGCTGTGCCAAGGCCTCTACTTCCACATCAACCAGACCCTGAGGGAGGCCCACTTCCACAGCCTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403627.7
ENST00000405159.7
ENST00000580032.1
ENST00000583178.5
CDS GCA 72 bp CTGCACAGCGCTGTCCCTTCACAGAAGGCAAGAAACTaGCGGCACATCATGTCAGAGGCCGCCCTCGGTGCT +
Preference number: 6 (lower is better)
Translates to: LHSAVPSQKARN*RHIMSEAALGA
Trigger: AGCACCGAGGGCGGCCTCTGACATGATGTGCCGGCAGTTTCTTGCCTTCTGTGAAGGGACAGCGCTGTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000405159.7
CDS TCA 72 bp GCTGCTGCTGCTGCTGCTCCCACCACTGTCACTGCCTaGAGACTCTGTGTCCCAGGAATCCTGAAAGACAGG +
Preference number: 6 (lower is better)
Translates to: AAAAAAPTTVTA*RLCVPGILKDR
Trigger: CCTGTCTTTCAGGATTCCTGGGACACAGAGTCTTCAGGCAGTGACAGTGGTGGGAGCAGCAGCAGCAGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403627.7
ENST00000583178.5
CDS CAA 72 bp CCACCACTGTCACTGCCTGAAGACGCGCAGAACGCTTaGTTTCCTCTTAGTCTGTTTTCTTTACTGTTTCTC +
Preference number: 6 (lower is better)
Translates to: PPLSLPEDAQNA*FPLSLFSLLFL
Trigger: GAGAAACAGTAAAGAAAACAGACTAAGAGGAAACAAAGCGTTCTGCGCGTCTTCAGGCAGTGACAGTGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405159.7
ENST00000579872.1
ENST00000580032.1