RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM102B (Homo sapiens)

Ensembl gene IDs: ENSG00000162636

Ensembl transcript IDs: ENST00000370035.8, ENST00000405454.1, ENST00000483371.1

Found 283 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AAGCCAGGTGCTTCCAAGGCACACAGTGGCACAGTGCCTGGAGACTaGCATGTAGATGTTCCCCTTTGGTGGCTGGTACAGGATGGCGGT +
Preference number: 1 (lower is better)
Translates to: KPGASKAHSGTVPGD*HVDVPLWWLVQDGG
Trigger: ACCGCCATCCTGTACCAGCCACCAAAGGGGAACATCTACATGGCAGTCTCCAGGCACTGTGCCACTGTGTGCCTTGGAAGCACCTGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370035.8
3UTR CCA 90 bp CACAGTGGCACAGTGCCTGGAGACTGCCATGTAGATGTTCCCCTTTaGTGGCTGGTACAGGATGGCGGTGGGTCCTTCCAGAGAAGAAAC +
Preference number: 1 (lower is better)
Translates to: HSGTVPGDCHVDVPL*WLVQDGGGSFQRRN
Trigger: GTTTCTTCTCTGGAAGGACCCACCGCCATCCTGTACCAGCCACCAAAGGGGAACATCTACATGGCAGTCTCCAGGCACTGTGCCACTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370035.8
3UTR CCA 90 bp TGGAGACTGCCATGTAGATGTTCCCCTTTGGTGGCTGGTACAGGATaGCGGTGGGTCCTTCCAGAGAAGAAACCAGCATTGGCTTTCCTC +
Preference number: 1 (lower is better)
Translates to: WRLPCRCSPLVAGTG*RWVLPEKKPALAFL
Trigger: GAGGAAAGCCAATGCTGGTTTCTTCTCTGGAAGGACCCACCGCCATCCTGTACCAGCCACCAAAGGGGAACATCTACATGGCAGTCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370035.8
3UTR GCA 90 bp CAGCAGCTCAGGGCACAGGAGGAGGTGGGTCTCCTGACTGGCCTGTaGATTCTCCCAAACAAGATGTTTAAGACTCTTCTTTATCTCGTC +
Preference number: 1 (lower is better)
Translates to: QQLRAQEEVGLLTGL*ILPNKMFKTLLYLV
Trigger: GACGAGATAAAGAAGAGTCTTAAACATCTTGTTTGGGAGAATGCACAGGCCAGTCAGGAGACCCACCTCCTCCTGTGCCCTGAGCTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370035.8
3UTR GCA 90 bp GGGAGTCAACAATTCGAGTGTAAACTGATGGCTCAGGGCCTTCTCTaGCCTTTACTAGCCTTCATGATCTGTCGGGTCTCAGCAGCTCAG +
Preference number: 1 (lower is better)
Translates to: GSQQFECKLMAQGLL*PLLAFMICRVSAAQ
Trigger: CTGAGCTGCTGAGACCCGACAGATCATGAAGGCTAGTAAAGGGCAGAGAAGGCCCTGAGCCATCAGTTTACACTCGAATTGTTGACTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370035.8
3UTR CCA 90 bp CTGCCATGTAGATGTTCCCCTTTGGTGGCTGGTACAGGATGGCGGTaGGTCCTTCCAGAGAAGAAACCAGCATTGGCTTTCCTCTTGATA +
Preference number: 1 (lower is better)
Translates to: LPCRCSPLVAGTGWR*VLPEKKPALAFLLI
Trigger: TATCAAGAGGAAAGCCAATGCTGGTTTCTTCTCTGGAAGGACCCACCGCCATCCTGTACCAGCCACCAAAGGGGAACATCTACATGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370035.8
3UTR CCA 90 bp ACCTACAGAGAGCTAAAATGGAAACCTAGTAGTCTGCATCAGTCATaGCAAGCAGCTGTCATGCTGCTACCCACCACCACTTCGGAAAAC +
Preference number: 1 (lower is better)
Translates to: TYRELKWKPSSLHQS*QAAVMLLPTTTSEN
Trigger: GTTTTCCGAAGTGGTGGTGGGTAGCAGCATGACAGCTGCTTGCCATGACTGATGCAGACTACTAGGTTTCCATTTTAGCTCTCTGTAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370035.8
3UTR GCA 90 bp AAAATGCAACCCCGTCATATGAGCCCAGTTTGTCTCTCAGAGCGTTaGTATATATACTGGAAGCCTGACACTTCAGAGTATGTACTTAAA +
Preference number: 1 (lower is better)
Translates to: KMQPRHMSPVCLSER*YIYWKPDTSEYVLK
Trigger: TTTAAGTACATACTCTGAAGTGTCAGGCTTCCAGTATATATAGCAACGCTCTGAGAGACAAACTGGGCTCATATGACGGGGTTGCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370035.8
3UTR TCA 90 bp CAGACACTTAGGCAACCCTTAGCGAGTATTTTGAAAGGACTGCACTaGAATTTGAACACAAAGTGTGCCAATGGAACACAAAATAGAAAA +
Preference number: 1 (lower is better)
Translates to: QTLRQPLASILKGLH*NLNTKCANGTQNRK
Trigger: TTTTCTATTTTGTGTTCCATTGGCACACTTTGTGTTCAAATTTCAGTGCAGTCCTTTCAAAATACTCGCTAAGGGTTGCCTAAGTGTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370035.8
3UTR CCA 90 bp AGAGGAAGGGGAACCTCAAATGAGATGTCTTTTCTCCATGGGATTTaGTCAACGCATATCAGTAAGATAATTTCTTTGCTATATACACAA +
Preference number: 1 (lower is better)
Translates to: RGRGTSNEMSFLHGI*STHISKIISLLYTQ
Trigger: TTGTGTATATAGCAAAGAAATTATCTTACTGATATGCGTTGACCAAATCCCATGGAGAAAAGACATCTCATTTGAGGTTCCCCTTCCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370035.8
3UTR-3UTR CCA 90 bp ATGATGTGCAGTGACCACAGAAGCCAGGTGCTTCCAAGGCACACAGTGGCACAGGTAGATGTTCCCCTTTaGTGGCTGGTACAGGATGGC +
Preference number: 2 (lower is better)
Translates to: MMCSDHRSQVLPRHTVAQVDVPL*WLVQDG
Trigger: GCCATCCTGTACCAGCCACCAAAGGGGAACATCTAC...CTGTGCCACTGTGTGCCTTGGAAGCACCTGGCTTCTGTGGTCACTGCACATCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370035.8
3UTR-3UTR CCA 90 bp GAGGTGTCGGACCAAGGGCAGCCAAGGATGAGTAAGATGGGCATCACCCTGATTAGTCTGCATCAGTCATaGCAAGCAGCTGTCATGCTG +
Preference number: 2 (lower is better)
Translates to: EVSDQGQPRMSKMGITLISLHQS*QAAVML
Trigger: CAGCATGACAGCTGCTTGCCATGACTGATGCAGACT...AATCAGGGTGATGCCCATCTTACTCATCCTTGGCTGCCCTTGGTCCGACACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370035.8
3UTR-3UTR GCA 90 bp GAGGTGTCGGACCAAGGGCAGCCAAGGATGAGTAAGATGGGCATCACCCTGATTGGAAACCTAGTAGTCTaGATCAGTCATGGCAAGCAG +
Preference number: 2 (lower is better)
Translates to: EVSDQGQPRMSKMGITLIGNLVV*ISHGKQ
Trigger: CTGCTTGCCATGACTGATGCAGACTACTAGGTTTCC...AATCAGGGTGATGCCCATCTTACTCATCCTTGGCTGCCCTTGGTCCGACACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370035.8
3UTR-3UTR GCA 90 bp GAGGTGTCGGACCAAGGGCAGCCAAGGATGAGTAAGATGGGCATCACCCTGATTGTTTATCTGCTGTGCTaGTCAACTGGATCCAGACCA +
Preference number: 2 (lower is better)
Translates to: EVSDQGQPRMSKMGITLIVYLLC*STGSRP
Trigger: TGGTCTGGATCCAGTTGAGCAGCACAGCAGATAAAC...AATCAGGGTGATGCCCATCTTACTCATCCTTGGCTGCCCTTGGTCCGACACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370035.8
3UTR-3UTR CCA 90 bp GAGTGTAAACTGATGGCTCAGGGCCTTCTCTGCCCTTTACTAGCCTTCATGATCGATGTTCCCCTTTGGTaGCTGGTACAGGATGGCGGT +
Preference number: 2 (lower is better)
Translates to: ECKLMAQGLLCPLLAFMIDVPLW*LVQDGG
Trigger: ACCGCCATCCTGTACCAGCCACCAAAGGGGAACATC...GATCATGAAGGCTAGTAAAGGGCAGAGAAGGCCCTGAGCCATCAGTTTACACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370035.8
3UTR-3UTR CCA 90 bp GAGTGTAAACTGATGGCTCAGGGCCTTCTCTGCCCTTTACTAGCCTTCATGATCGGTACAGGATGGCGGTaGGTCCTTCCAGAGAAGAAA +
Preference number: 2 (lower is better)
Translates to: ECKLMAQGLLCPLLAFMIGTGWR*VLPEKK
Trigger: TTTCTTCTCTGGAAGGACCCACCGCCATCCTGTACC...GATCATGAAGGCTAGTAAAGGGCAGAGAAGGCCCTGAGCCATCAGTTTACACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370035.8
3UTR-3UTR GCA 90 bp GAGTGTAAACTGATGGCTCAGGGCCTTCTCTGCCCTTTACTAGCCTTCATGATCACAGTGCCTGGAGACTaGCATGTAGATGTTCCCCTT +
Preference number: 2 (lower is better)
Translates to: ECKLMAQGLLCPLLAFMITVPGD*HVDVPL
Trigger: AAGGGGAACATCTACATGGCAGTCTCCAGGCACTGT...GATCATGAAGGCTAGTAAAGGGCAGAGAAGGCCCTGAGCCATCAGTTTACACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370035.8
3UTR-3UTR CCA 90 bp CAAAGCATGAACACCCACACTTTATACAATGCTGTAGGTAGTGTAATAGGGAAGGTGGCTGGTACAGGATaGCGGTGGGTCCTTCCAGAG +
Preference number: 2 (lower is better)
Translates to: QSMNTHTLYNAVGSVIGKVAGTG*RWVLPE
Trigger: CTCTGGAAGGACCCACCGCCATCCTGTACCAGCCAC...CTTCCCTATTACACTACCTACAGCATTGTATAAAGTGTGGGTGTTCATGCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370035.8
3UTR-3UTR GCA 90 bp TGCATTCACATGACGTACCATCTAGAACTGACCAAACAGAATTTCAGAACTGCCACCACAGAAGCCAGGTaGTTCCAAGGCACACAGTGG +
Preference number: 2 (lower is better)
Translates to: CIHMTYHLELTKQNFRTATTEAR*FQGTQW
Trigger: CCACTGTGTGCCTTGGAAGCACCTGGCTTCTGTGGT...GGCAGTTCTGAAATTCTGTTTGGTCAGTTCTAGATGGTACGTCATGTGAATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370035.8
3UTR-3UTR CCA 90 bp CAAAGCATGAACACCCACACTTTATACAATGCTGTAGGTAGTGTAATAGGGAAGTTCCCCTTTGGTGGCTaGTACAGGATGGCGGTGGGT +
Preference number: 2 (lower is better)
Translates to: QSMNTHTLYNAVGSVIGKFPFGG*YRMAVG
Trigger: ACCCACCGCCATCCTGTACCAGCCACCAAAGGGGAA...CTTCCCTATTACACTACCTACAGCATTGTATAAAGTGTGGGTGTTCATGCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370035.8
3UTR-3UTR TCA 90 bp GAGTGTAAACTGATGGCTCAGGGCCTTCTCTGCCCTTTACTAGCCTTCATGATCGACTGCACTGAAATTTaGACACAAAGTGTGCCAATG +
Preference number: 2 (lower is better)
Translates to: ECKLMAQGLLCPLLAFMIDCTEI*TQSVPM
Trigger: CATTGGCACACTTTGTGTTCAAATTTCAGTGCAGTC...GATCATGAAGGCTAGTAAAGGGCAGAGAAGGCCCTGAGCCATCAGTTTACACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370035.8
3UTR-3UTR CCA 90 bp GTTAAGCTGGAATGGGAGGAGTGGTGGAGTTTAGGATTCTTGGTCAAGACTTTTGCTGTGCTGCTCAACTaGATCCAGACCAGGTATTCT +
Preference number: 2 (lower is better)
Translates to: VKLEWEEWWSLGFLVKTFAVLLN*IQTRYS
Trigger: AGAATACCTGGTCTGGATCCAGTTGAGCAGCACAGC...AAAAGTCTTGACCAAGAATCCTAAACTCCACCACTCCTCCCATTCCAGCTTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370035.8
3UTR-3UTR TCA 90 bp GAGTGTAAACTGATGGCTCAGGGCCTTCTCTGCCCTTTACTAGCCTTCATGATCAGGCTTCTCTGTTTCTaGCCATATTACAATTCTCCT +
Preference number: 2 (lower is better)
Translates to: ECKLMAQGLLCPLLAFMIRLLCF*PYYNSP
Trigger: AGGAGAATTGTAATATGGTCAGAAACAGAGAAGCCT...GATCATGAAGGCTAGTAAAGGGCAGAGAAGGCCCTGAGCCATCAGTTTACACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370035.8
3UTR-3UTR CCA 90 bp AACAAATCACTTTCGACACAGTGGGGAAGAAAACAGTACCTACAGAGAGCTAAACAGTGGCACAGTGCCTaGAGACTGCCATGTAGATGT +
Preference number: 2 (lower is better)
Translates to: NKSLSTQWGRKQYLQRAKQWHSA*RLPCRC
Trigger: ACATCTACATGGCAGTCTCCAGGCACTGTGCCACTG...TTTAGCTCTCTGTAGGTACTGTTTTCTTCCCCACTGTGTCGAAAGTGATTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370035.8
3UTR-3UTR GCA 90 bp TATAAGCAGCCTTCAAAAACACCACAAAGGGGAGTCAACAATTCGAGTGTAAACCTCCTGACTGGCCTGTaGATTCTCCCAAACAAGATG +
Preference number: 2 (lower is better)
Translates to: YKQPSKTPQRGVNNSSVNLLTGL*ILPNKM
Trigger: CATCTTGTTTGGGAGAATGCACAGGCCAGTCAGGAG...GTTTACACTCGAATTGTTGACTCCCCTTTGTGGTGTTTTTGAAGGCTGCTTATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370035.8
3UTR-3UTR CCA 90 bp GAGTGTAAACTGATGGCTCAGGGCCTTCTCTGCCCTTTACTAGCCTTCATGATCTACAGAGAGCTAAAATaGAAACCTAGTAGTCTGCAT +
Preference number: 2 (lower is better)
Translates to: ECKLMAQGLLCPLLAFMIYRELK*KPSSLH
Trigger: ATGCAGACTACTAGGTTTCCATTTTAGCTCTCTGTA...GATCATGAAGGCTAGTAAAGGGCAGAGAAGGCCCTGAGCCATCAGTTTACACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370035.8
3UTR CAA 90 bp AGCTCTTCTGTTAGGGTGCCCAACACAGTAAGTGTTAAACTTATTTaGAGTCTTTTATGTAGTGCTTGGGGGTGGTTCTGCAGCTCATCT +
Preference number: 2 (lower is better)
Translates to: SSSVRVPNTVSVKLI*SLLCSAWGWFCSSS
Trigger: AGATGAGCTGCAGAACCACCCCCAAGCACTACATAAAAGACTCAAAATAAGTTTAACACTTACTGTGTTGGGCACCCTAACAGAAGAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370035.8
3UTR-3UTR CCA 90 bp TATAAGCAGCCTTCAAAAACACCACAAAGGGGAGTCAACAATTCGAGTGTAAACTGTAGTGCTTGGGGGTaGTTCTGCAGCTCATCTAAT +
Preference number: 2 (lower is better)
Translates to: YKQPSKTPQRGVNNSSVNCSAWG*FCSSSN
Trigger: ATTAGATGAGCTGCAGAACCACCCCCAAGCACTACA...GTTTACACTCGAATTGTTGACTCCCCTTTGTGGTGTTTTTGAAGGCTGCTTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000370035.8
3UTR-3UTR TCA 90 bp TGCATTCACATGACGTACCATCTAGAACTGACCAAACAGAATTTCAGAACTGCCCATTTTCCCAAAGCATaGACACCCACACTTTATACA +
Preference number: 2 (lower is better)
Translates to: CIHMTYHLELTKQNFRTAHFPKA*TPTLYT
Trigger: TGTATAAAGTGTGGGTGTTCATGCTTTGGGAAAATG...GGCAGTTCTGAAATTCTGTTTGGTCAGTTCTAGATGGTACGTCATGTGAATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370035.8
3UTR-3UTR GCA 90 bp TATAAGCAGCCTTCAAAAACACCACAAAGGGGAGTCAACAATTCGAGTGTAAACACTCTAAGGTTTATCTaGTGTGCTGCTCAACTGGAT +
Preference number: 2 (lower is better)
Translates to: YKQPSKTPQRGVNNSSVNTLRFI*CAAQLD
Trigger: ATCCAGTTGAGCAGCACAGCAGATAAACCTTAGAGT...GTTTACACTCGAATTGTTGACTCCCCTTTGTGGTGTTTTTGAAGGCTGCTTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370035.8
3UTR-3UTR CCA 90 bp AACAAATCACTTTCGACACAGTGGGGAAGAAAACAGTACCTACAGAGAGCTAAATGCTGTTTTCTCCGCTaGGGTGTTCTGAAAGAAAAA +
Preference number: 2 (lower is better)
Translates to: NKSLSTQWGRKQYLQRAKCCFLR*GVLKEK
Trigger: TTTTTCTTTCAGAACACCCCAGCGGAGAAAACAGCA...TTTAGCTCTCTGTAGGTACTGTTTTCTTCCCCACTGTGTCGAAAGTGATTTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370035.8
3UTR CCA 72 bp ACAGTGCCTGGAGACTGCCATGTAGATGTTCCCCTTTaGTGGCTGGTACAGGATGGCGGTGGGTCCTTCCAG +
Preference number: 3 (lower is better)
Translates to: TVPGDCHVDVPL*WLVQDGGGSFQ
Trigger: CTGGAAGGACCCACCGCCATCCTGTACCAGCCACCAAAGGGGAACATCTACATGGCAGTCTCCAGGCACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370035.8
3UTR CCA 72 bp GTGACCACAGAAGCCAGGTGCTTCCAAGGCACACAGTaGCACAGTGCCTGGAGACTGCCATGTAGATGTTCC +
Preference number: 3 (lower is better)
Translates to: VTTEARCFQGTQ*HSAWRLPCRCS
Trigger: GGAACATCTACATGGCAGTCTCCAGGCACTGTGCCACTGTGTGCCTTGGAAGCACCTGGCTTCTGTGGTCAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370035.8
3UTR CCA 72 bp AGATGTTCCCCTTTGGTGGCTGGTACAGGATGGCGGTaGGTCCTTCCAGAGAAGAAACCAGCATTGGCTTTC +
Preference number: 3 (lower is better)
Translates to: RCSPLVAGTGWR*VLPEKKPALAF
Trigger: GAAAGCCAATGCTGGTTTCTTCTCTGGAAGGACCCACCGCCATCCTGTACCAGCCACCAAAGGGGAACATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370035.8
3UTR CCA 72 bp CCATGTAGATGTTCCCCTTTGGTGGCTGGTACAGGATaGCGGTGGGTCCTTCCAGAGAAGAAACCAGCATTG +
Preference number: 3 (lower is better)
Translates to: PCRCSPLVAGTG*RWVLPEKKPAL
Trigger: CAATGCTGGTTTCTTCTCTGGAAGGACCCACCGCCATCCTGTACCAGCCACCAAAGGGGAACATCTACATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370035.8
3UTR GCA 72 bp CTAGTAGTCTGCATCAGTCATGGCAAGCAGCTGTCATaGTGCTACCCACCACCACTTCGGAAAACTGTTAGC +
Preference number: 3 (lower is better)
Translates to: LVVCISHGKQLS*CYPPPLRKTVS
Trigger: GCTAACAGTTTTCCGAAGTGGTGGTGGGTAGCAGCATGACAGCTGCTTGCCATGACTGATGCAGACTACTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370035.8
3UTR-3UTR CAA 90 bp AGGACACGCTCCCATGACACAGTCTCAGGAGGTCCTGACAACATGTACTCAGGGTATGTAAGAAGTACATaGGTTCCATCCAGAAAGGCG +
Preference number: 3 (lower is better)
Translates to: RTRSHDTVSGGPDNMYSGYVRST*VPSRKA
Trigger: CGCCTTTCTGGATGGAACCAATGTACTTCTTACATA...CCCTGAGTACATGTTGTCAGGACCTCCTGAGACTGTGTCATGGGAGCGTGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405454.1
3UTR GCA 72 bp CAATTCGAGTGTAAACTGATGGCTCAGGGCCTTCTCTaGCCTTTACTAGCCTTCATGATCTGTCGGGTCTCA +
Preference number: 3 (lower is better)
Translates to: QFECKLMAQGLL*PLLAFMICRVS
Trigger: TGAGACCCGACAGATCATGAAGGCTAGTAAAGGGCAGAGAAGGCCCTGAGCCATCAGTTTACACTCGAATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370035.8
3UTR CCA 72 bp GAGCTAAAATGGAAACCTAGTAGTCTGCATCAGTCATaGCAAGCAGCTGTCATGCTGCTACCCACCACCACT +
Preference number: 3 (lower is better)
Translates to: ELKWKPSSLHQS*QAAVMLLPTTT
Trigger: AGTGGTGGTGGGTAGCAGCATGACAGCTGCTTGCCATGACTGATGCAGACTACTAGGTTTCCATTTTAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370035.8
3UTR-3UTR CAA 90 bp GAGTGTAAACTGATGGCTCAGGGCCTTCTCTGCCCTTTACTAGCCTTCATGATCGAGAAGAAACCAGCATaGGCTTTCCTCTTGATAGTT +
Preference number: 3 (lower is better)
Translates to: ECKLMAQGLLCPLLAFMIEKKPA*AFLLIV
Trigger: AACTATCAAGAGGAAAGCCAATGCTGGTTTCTTCTC...GATCATGAAGGCTAGTAAAGGGCAGAGAAGGCCCTGAGCCATCAGTTTACACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370035.8
3UTR-3UTR CAA 90 bp TATAAGCAGCCTTCAAAAACACCACAAAGGGGAGTCAACAATTCGAGTGTAAACTGTAGATGTTCCCCTTaGGTGGCTGGTACAGGATGG +
Preference number: 3 (lower is better)
Translates to: YKQPSKTPQRGVNNSSVNCRCSP*VAGTGW
Trigger: CCATCCTGTACCAGCCACCAAAGGGGAACATCTACA...GTTTACACTCGAATTGTTGACTCCCCTTTGTGGTGTTTTTGAAGGCTGCTTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370035.8
3UTR-3UTR CAA 90 bp CAAAGCATGAACACCCACACTTTATACAATGCTGTAGGTAGTGTAATAGGGAAGGCATTGGCTTTCCTCTaGATAGTTGAGGTTCATTTT +
Preference number: 3 (lower is better)
Translates to: QSMNTHTLYNAVGSVIGKALAFL*IVEVHF
Trigger: AAAATGAACCTCAACTATCAAGAGGAAAGCCAATGC...CTTCCCTATTACACTACCTACAGCATTGTATAAAGTGTGGGTGTTCATGCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370035.8
3UTR CCA 72 bp TATTATTCTGATAGTGTTAAGCTGGAATGGGAGGAGTaGTGGAGTTTAGGATTCTTGGTCAAGACTTTTTCA +
Preference number: 3 (lower is better)
Translates to: YYSDSVKLEWEE*WSLGFLVKTFS
Trigger: TGAAAAAGTCTTGACCAAGAATCCTAAACTCCACCACTCCTCCCATTCCAGCTTAACACTATCAGAATAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370035.8
3UTR CCA 72 bp GGAACCTCAAATGAGATGTCTTTTCTCCATGGGATTTaGTCAACGCATATCAGTAAGATAATTTCTTTGCTA +
Preference number: 3 (lower is better)
Translates to: GTSNEMSFLHGI*STHISKIISLL
Trigger: TAGCAAAGAAATTATCTTACTGATATGCGTTGACCAAATCCCATGGAGAAAAGACATCTCATTTGAGGTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR CCA 90 bp CCCATGACACAGTCTCAGGAGGTCCTGACAACATGTACTCAGGGTGGTCGGGGCGCCGCCGCCTCAGCTTaGCCGAGCCCCGGATCAGCC +
Preference number: 4 (lower is better)
Translates to: PMTQSQEVLTTCTQGGRGAAASA*PSPGSA
Trigger: GGCTGATCCGGGGCTCGGCCAAGCTGAGGCGGCGGC...GCCCCGACCACCCTGAGTACATGTTGTCAGGACCTCCTGAGACTGTGTCATGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405454.1
CDS-3UTR TCA 90 bp CCCATGACACAGTCTCAGGAGGTCCTGACAACATGTACTCAGGGTGGTCGGGGCGCTCGCCCGGGGAGGTaGGCGCCCTTTTGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: PMTQSQEVLTTCTQGGRGARPGR*APFWCS
Trigger: TGAGCACCAAAAGGGCGCTCACCTCCCCGGGCGAGC...GCCCCGACCACCCTGAGTACATGTTGTCAGGACCTCCTGAGACTGTGTCATGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000405454.1
CDS-3UTR GCA 90 bp GAGGTGTCGGACCAAGGGCAGCCAAGGATGAGTAAGATGGGCATCACCCTGATTGGGGAGCGGTCGTGCTaGAGCTCGCCCGGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: EVSDQGQPRMSKMGITLIGERSC*SSPGEV
Trigger: CACCTCCCCGGGCGAGCTGCAGCACGACCGCTCCCC...AATCAGGGTGATGCCCATCTTACTCATCCTTGGCTGCCCTTGGTCCGACACCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR CCA 90 bp ACACGCTCCCATGACACAGTCTCAGGAGGTCCTGACAACATGTACTCAGGGTGGATCAGCCCAGCCCCATaGCCGGGGCCGCGAGCTGTG +
Preference number: 4 (lower is better)
Translates to: TRSHDTVSGGPDNMYSGWISPAP*PGPRAV
Trigger: CACAGCTCGCGGCCCCGGCCATGGGGCTGGGCTGAT...CCACCCTGAGTACATGTTGTCAGGACCTCCTGAGACTGTGTCATGGGAGCGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405454.1
CDS-3UTR TCA 90 bp ATGATGTGCAGTGACCACAGAAGCCAGGTGCTTCCAAGGCACACAGTGGCACAGTGGAGGACTCGGCGGTaGAGCTGCCGCCGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: MMCSDHRSQVLPRHTVAQWRTRR*SCRRPA
Trigger: TGCTGGACGGCGGCAGCTTCACCGCCGAGTCCTCCA...CTGTGCCACTGTGTGCCTTGGAAGCACCTGGCTTCTGTGGTCACTGCACATCAT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR TCA 90 bp AGGACACGCTCCCATGACACAGTCTCAGGAGGTCCTGACAACATGTACTCAGGGTGGAGGACTCGGCGGTaGAGCTGCCGCCGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: RTRSHDTVSGGPDNMYSGWRTRR*SCRRPA
Trigger: TGCTGGACGGCGGCAGCTTCACCGCCGAGTCCTCCA...CCCTGAGTACATGTTGTCAGGACCTCCTGAGACTGTGTCATGGGAGCGTGTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405454.1
CDS-3UTR GCA 90 bp TTGAGGACACGCTCCCATGACACAGTCTCAGGAGGTCCTGACAACATGTACTCAGGGGAGCGGTCGTGCTaGAGCTCGCCCGGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: LRTRSHDTVSGGPDNMYSGERSC*SSPGEV
Trigger: CACCTCCCCGGGCGAGCTGCAGCACGACCGCTCCCC...TGAGTACATGTTGTCAGGACCTCCTGAGACTGTGTCATGGGAGCGTGTCCTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405454.1
3UTR CAA 72 bp CACAGTGCCTGGAGACTGCCATGTAGATGTTCCCCTTaGGTGGCTGGTACAGGATGGCGGTGGGTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: HSAWRLPCRCSP*VAGTGWRWVLP
Trigger: TGGAAGGACCCACCGCCATCCTGTACCAGCCACCAAAGGGGAACATCTACATGGCAGTCTCCAGGCACTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR TCA 90 bp CCCATGACACAGTCTCAGGAGGTCCTGACAACATGTACTCAGGGTGGTCGGGGCGCGAGTGGTATTTCCTaGTCCAGCAAACTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: PMTQSQEVLTTCTQGGRGASGIS*SSKLCQ
Trigger: CTGGCAGAGTTTGCTGGATCAGGAAATACCACTCGC...GCCCCGACCACCCTGAGTACATGTTGTCAGGACCTCCTGAGACTGTGTCATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405454.1
CDS-3UTR TCA 90 bp TTGAGGACACGCTCCCATGACACAGTCTCAGGAGGTCCTGACAACATGTACTCAGAGGACACGCTCCCATaGCACAGTCTCAGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: LRTRSHDTVSGGPDNMYSEDTLP*HSLRRS
Trigger: GGACCTCCTGAGACTGTGTCATGGGAGCGTGTCCTC...TGAGTACATGTTGTCAGGACCTCCTGAGACTGTGTCATGGGAGCGTGTCCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405454.1
CDS-3UTR GCA 90 bp CCCATGACACAGTCTCAGGAGGTCCTGACAACATGTACTCAGGGTGGTCGGGGCTACAAGGATCTAGGATaGCTGTGGCAGCACTTGCAC +
Preference number: 4 (lower is better)
Translates to: PMTQSQEVLTTCTQGGRGYKDLG*LWQHLH
Trigger: GTGCAAGTGCTGCCACAGGCATCCTAGATCCTTGTA...GCCCCGACCACCCTGAGTACATGTTGTCAGGACCTCCTGAGACTGTGTCATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405454.1
CDS-3UTR GCA 90 bp GAGGTGTCGGACCAAGGGCAGCCAAGGATGAGTAAGATGGGCATCACCCTGATTGGCAAGCAGCTGTCATaGTGCTACCCACCACCACTT +
Preference number: 4 (lower is better)
Translates to: EVSDQGQPRMSKMGITLIGKQLS*CYPPPL
Trigger: AAGTGGTGGTGGGTAGCAGCATGACAGCTGCTTGCC...AATCAGGGTGATGCCCATCTTACTCATCCTTGGCTGCCCTTGGTCCGACACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR CCA 90 bp GTTAAGCTGGAATGGGAGGAGTGGTGGAGTTTAGGATTCTTGGTCAAGACTTTTATCAGCCCAGCCCCATaGCCGGGGCCGCGAGCTGTG +
Preference number: 4 (lower is better)
Translates to: VKLEWEEWWSLGFLVKTFISPAP*PGPRAV
Trigger: CACAGCTCGCGGCCCCGGCCATGGGGCTGGGCTGAT...AAAAGTCTTGACCAAGAATCCTAAACTCCACCACTCCTCCCATTCCAGCTTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR TCA 90 bp TTGAGGACACGCTCCCATGACACAGTCTCAGGAGGTCCTGACAACATGTACTCAATTGACGAAGGGCACTaGGGAGAGCTCCTCGAGCTC +
Preference number: 4 (lower is better)
Translates to: LRTRSHDTVSGGPDNMYSIDEGH*GELLEL
Trigger: GAGCTCGAGGAGCTCTCCTCAGTGCCCTTCGTCAAT...TGAGTACATGTTGTCAGGACCTCCTGAGACTGTGTCATGGGAGCGTGTCCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405454.1
CDS-3UTR TCA 90 bp AGGACACGCTCCCATGACACAGTCTCAGGAGGTCCTGACAACATGTACTCAGGGCTAGATGACCGGGAGTaGCACGTGCTATACCCTGAT +
Preference number: 4 (lower is better)
Translates to: RTRSHDTVSGGPDNMYSGLDDRE*HVLYPD
Trigger: ATCAGGGTATAGCACGTGTCACTCCCGGTCATCTAG...CCCTGAGTACATGTTGTCAGGACCTCCTGAGACTGTGTCATGGGAGCGTGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405454.1
CDS-3UTR TCA 90 bp ACACGCTCCCATGACACAGTCTCAGGAGGTCCTGACAACATGTACTCAGGGTGGCTCAGAGAAACTAGATaGCCGGGAGTGACACGTGCT +
Preference number: 4 (lower is better)
Translates to: TRSHDTVSGGPDNMYSGWLRETR*PGVTRA
Trigger: AGCACGTGTCACTCCCGGTCATCTAGTTTCTCTGAG...CCACCCTGAGTACATGTTGTCAGGACCTCCTGAGACTGTGTCATGGGAGCGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405454.1
CDS-3UTR TCA 90 bp ACACGCTCCCATGACACAGTCTCAGGAGGTCCTGACAACATGTACTCAGGGTGGAGTCTCAGGAGGTCCTaGCAACATGTACTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: TRSHDTVSGGPDNMYSGWSLRRS*QHVLRV
Trigger: CACCCTGAGTACATGTTGTCAGGACCTCCTGAGACT...CCACCCTGAGTACATGTTGTCAGGACCTCCTGAGACTGTGTCATGGGAGCGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405454.1
CDS-3UTR GCA 90 bp AGGACACGCTCCCATGACACAGTCTCAGGAGGTCCTGACAACATGTACTCAGGGCCAGCGAACACAGTTTaGTTGTACCACCTCCCTGGA +
Preference number: 4 (lower is better)
Translates to: RTRSHDTVSGGPDNMYSGPANTV*LYHLPG
Trigger: TCCAGGGAGGTGGTACAAGCAAACTGTGTTCGCTGG...CCCTGAGTACATGTTGTCAGGACCTCCTGAGACTGTGTCATGGGAGCGTGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405454.1
CDS-3UTR CCA 90 bp TATAAGCAGCCTTCAAAAACACCACAAAGGGGAGTCAACAATTCGAGTGTAAACGCCGCCGCCTCAGCTTaGCCGAGCCCCGGATCAGCC +
Preference number: 4 (lower is better)
Translates to: YKQPSKTPQRGVNNSSVNAAASA*PSPGSA
Trigger: GGCTGATCCGGGGCTCGGCCAAGCTGAGGCGGCGGC...GTTTACACTCGAATTGTTGACTCCCCTTTGTGGTGTTTTTGAAGGCTGCTTATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR CCA 90 bp CCCATGACACAGTCTCAGGAGGTCCTGACAACATGTACTCAGGGTGGTCGGGGCGTAAACAGCGGCGAGTaGTATTTCCTGATCCAGCAA +
Preference number: 4 (lower is better)
Translates to: PMTQSQEVLTTCTQGGRGVNSGE*YFLIQQ
Trigger: TTGCTGGATCAGGAAATACCACTCGCCGCTGTTTAC...GCCCCGACCACCCTGAGTACATGTTGTCAGGACCTCCTGAGACTGTGTCATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405454.1
CDS-3UTR CCA 90 bp AGGACACGCTCCCATGACACAGTCTCAGGAGGTCCTGACAACATGTACTCAGGGGGCACCAAGTTCGTCTaGAACAGAGGCACTCTTTGC +
Preference number: 4 (lower is better)
Translates to: RTRSHDTVSGGPDNMYSGGTKFV*NRGTLC
Trigger: GCAAAGAGTGCCTCTGTTCCAGACGAACTTGGTGCC...CCCTGAGTACATGTTGTCAGGACCTCCTGAGACTGTGTCATGGGAGCGTGTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405454.1
CDS-3UTR CCA 90 bp GAGGTGTCGGACCAAGGGCAGCCAAGGATGAGTAAGATGGGCATCACCCTGATTGGTACAGGATGGCGGTaGGTCCTTCCAGAGAAGAAA +
Preference number: 4 (lower is better)
Translates to: EVSDQGQPRMSKMGITLIGTGWR*VLPEKK
Trigger: TTTCTTCTCTGGAAGGACCCACCGCCATCCTGTACC...AATCAGGGTGATGCCCATCTTACTCATCCTTGGCTGCCCTTGGTCCGACACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR GCA 90 bp GAGGTGTCGGACCAAGGGCAGCCAAGGATGAGTAAGATGGGCATCACCCTGATTTACAAGGATCTAGGATaGCTGTGGCAGCACTTGCAC +
Preference number: 4 (lower is better)
Translates to: EVSDQGQPRMSKMGITLIYKDLG*LWQHLH
Trigger: GTGCAAGTGCTGCCACAGGCATCCTAGATCCTTGTA...AATCAGGGTGATGCCCATCTTACTCATCCTTGGCTGCCCTTGGTCCGACACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR GCA 90 bp CCCATGACACAGTCTCAGGAGGTCCTGACAACATGTACTCAGGGTGGTCGGGGCCAACTCCTGTTGATGTaGTTCCCACTGAGGTATTTC +
Preference number: 4 (lower is better)
Translates to: PMTQSQEVLTTCTQGGRGQLLLM*FPLRYF
Trigger: GAAATACCTCAGTGGGAAGCACATCAACAGGAGTTG...GCCCCGACCACCCTGAGTACATGTTGTCAGGACCTCCTGAGACTGTGTCATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405454.1
CDS-3UTR GCA 90 bp GAGGTGTCGGACCAAGGGCAGCCAAGGATGAGTAAGATGGGCATCACCCTGATTACAGTGCCTGGAGACTaGCATGTAGATGTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: EVSDQGQPRMSKMGITLITVPGD*HVDVPL
Trigger: AAGGGGAACATCTACATGGCAGTCTCCAGGCACTGT...AATCAGGGTGATGCCCATCTTACTCATCCTTGGCTGCCCTTGGTCCGACACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR CCA 90 bp ATGATGTGCAGTGACCACAGAAGCCAGGTGCTTCCAAGGCACACAGTGGCACAGCATCTGCATCCACCCTaGTGTCATCAACTCGCTTCA +
Preference number: 4 (lower is better)
Translates to: MMCSDHRSQVLPRHTVAQHLHPP*CHQLAS
Trigger: TGAAGCGAGTTGATGACACCAGGGTGGATGCAGATG...CTGTGCCACTGTGTGCCTTGGAAGCACCTGGCTTCTGTGGTCACTGCACATCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR CCA 90 bp AGGACACGCTCCCATGACACAGTCTCAGGAGGTCCTGACAACATGTACTCAGGGCATCTGCATCCACCCTaGTGTCATCAACTCGCTTCA +
Preference number: 4 (lower is better)
Translates to: RTRSHDTVSGGPDNMYSGHLHPP*CHQLAS
Trigger: TGAAGCGAGTTGATGACACCAGGGTGGATGCAGATG...CCCTGAGTACATGTTGTCAGGACCTCCTGAGACTGTGTCATGGGAGCGTGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405454.1
CDS-3UTR CCA 90 bp AGGACACGCTCCCATGACACAGTCTCAGGAGGTCCTGACAACATGTACTCAGGGAACATGTACTCAGGGTaGTCGGGGCACATCTTGGTT +
Preference number: 4 (lower is better)
Translates to: RTRSHDTVSGGPDNMYSGNMYSG*SGHILV
Trigger: AACCAAGATGTGCCCCGACCACCCTGAGTACATGTT...CCCTGAGTACATGTTGTCAGGACCTCCTGAGACTGTGTCATGGGAGCGTGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405454.1
CDS-3UTR TCA 90 bp TATAAGCAGCCTTCAAAAACACCACAAAGGGGAGTCAACAATTCGAGTGTAAACGCTCGCCCGGGGAGGTaGGCGCCCTTTTGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: YKQPSKTPQRGVNNSSVNARPGR*APFWCS
Trigger: TGAGCACCAAAAGGGCGCTCACCTCCCCGGGCGAGC...GTTTACACTCGAATTGTTGACTCCCCTTTGTGGTGTTTTTGAAGGCTGCTTATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR TCA 90 bp CCCATGACACAGTCTCAGGAGGTCCTGACAACATGTACTCAGGGTGGTCGGGGCTCAACTCGCTTCAGCTaGGATTCTACAGAATCTTGT +
Preference number: 4 (lower is better)
Translates to: PMTQSQEVLTTCTQGGRGSTRFS*DSTESC
Trigger: ACAAGATTCTGTAGAATCTCAGCTGAAGCGAGTTGA...GCCCCGACCACCCTGAGTACATGTTGTCAGGACCTCCTGAGACTGTGTCATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405454.1
CDS-3UTR TCA 90 bp ATGATGTGCAGTGACCACAGAAGCCAGGTGCTTCCAAGGCACACAGTGGCACAGAATTCGAGTGTAAACTaGTGGCTCAGGGCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: MMCSDHRSQVLPRHTVAQNSSVN*WLRAFS
Trigger: AGAGAAGGCCCTGAGCCATCAGTTTACACTCGAATT...CTGTGCCACTGTGTGCCTTGGAAGCACCTGGCTTCTGTGGTCACTGCACATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR GCA 90 bp ATGACACAGTCTCAGGAGGTCCTGACAACATGTACTCAGGGTGGTCGGGGCACAACCGGGAGTGACACGTaGTATACCCTGATACTTTTG +
Preference number: 4 (lower is better)
Translates to: MTQSQEVLTTCTQGGRGTTGSDT*YTLILL
Trigger: CAAAAGTATCAGGGTATAGCACGTGTCACTCCCGGT...TGTGCCCCGACCACCCTGAGTACATGTTGTCAGGACCTCCTGAGACTGTGTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405454.1
CDS-3UTR GCA 90 bp ATGACACAGTCTCAGGAGGTCCTGACAACATGTACTCAGGGTGGTCGGGGCACACTCTACAATGTCATCTaGATCCACCCTGGTGTCATC +
Preference number: 4 (lower is better)
Translates to: MTQSQEVLTTCTQGGRGTLYNVI*IHPGVI
Trigger: GATGACACCAGGGTGGATGCAGATGACATTGTAGAG...TGTGCCCCGACCACCCTGAGTACATGTTGTCAGGACCTCCTGAGACTGTGTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405454.1
CDS-3UTR GCA 90 bp ATGATGTGCAGTGACCACAGAAGCCAGGTGCTTCCAAGGCACACAGTGGCACAGGGAAACCTAGTAGTCTaGATCAGTCATGGCAAGCAG +
Preference number: 4 (lower is better)
Translates to: MMCSDHRSQVLPRHTVAQGNLVV*ISHGKQ
Trigger: CTGCTTGCCATGACTGATGCAGACTACTAGGTTTCC...CTGTGCCACTGTGTGCCTTGGAAGCACCTGGCTTCTGTGGTCACTGCACATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR CCA 90 bp GAGGTGTCGGACCAAGGGCAGCCAAGGATGAGTAAGATGGGCATCACCCTGATTCTGGAATGGGAGGAGTaGTGGAGTTTAGGATTCTTG +
Preference number: 4 (lower is better)
Translates to: EVSDQGQPRMSKMGITLILEWEE*WSLGFL
Trigger: CAAGAATCCTAAACTCCACCACTCCTCCCATTCCAG...AATCAGGGTGATGCCCATCTTACTCATCCTTGGCTGCCCTTGGTCCGACACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR TCA 90 bp CCCATGACACAGTCTCAGGAGGTCCTGACAACATGTACTCAGGGTGGTCGGGGCCATTTTGCACATAAATaGGAACTTCTTTCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: PMTQSQEVLTTCTQGGRGHFAHK*ELLSPA
Trigger: CGCTGGAGAAAGAAGTTCTCATTTATGTGCAAAATG...GCCCCGACCACCCTGAGTACATGTTGTCAGGACCTCCTGAGACTGTGTCATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405454.1
CDS-3UTR TCA 90 bp GAGTGTAAACTGATGGCTCAGGGCCTTCTCTGCCCTTTACTAGCCTTCATGATCGCGAGTGGTATTTCCTaGTCCAGCAAACTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: ECKLMAQGLLCPLLAFMIASGIS*SSKLCQ
Trigger: CTGGCAGAGTTTGCTGGATCAGGAAATACCACTCGC...GATCATGAAGGCTAGTAAAGGGCAGAGAAGGCCCTGAGCCATCAGTTTACACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR TCA 90 bp AGGACACGCTCCCATGACACAGTCTCAGGAGGTCCTGACAACATGTACTCAGGGAGAGGCACTCTTTGCTaGAAGATCTGCTATTCCAAG +
Preference number: 4 (lower is better)
Translates to: RTRSHDTVSGGPDNMYSGRGTLC*KICYSK
Trigger: CTTGGAATAGCAGATCTTTCAGCAAAGAGTGCCTCT...CCCTGAGTACATGTTGTCAGGACCTCCTGAGACTGTGTCATGGGAGCGTGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405454.1
CDS-3UTR TCA 90 bp GAGTGTAAACTGATGGCTCAGGGCCTTCTCTGCCCTTTACTAGCCTTCATGATCAGATGGGCATCACCCTaGTTGCAGCACCTCTTACGT +
Preference number: 4 (lower is better)
Translates to: ECKLMAQGLLCPLLAFMIRWASP*LQHLLR
Trigger: ACGTAAGAGGTGCTGCAATCAGGGTGATGCCCATCT...GATCATGAAGGCTAGTAAAGGGCAGAGAAGGCCCTGAGCCATCAGTTTACACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR TCA 90 bp GAGGTGTCGGACCAAGGGCAGCCAAGGATGAGTAAGATGGGCATCACCCTGATTAAGGGGAACCTCAAATaGGATGTCTTTTCTCCATGG +
Preference number: 4 (lower is better)
Translates to: EVSDQGQPRMSKMGITLIKGNLK*DVFSPW
Trigger: CCATGGAGAAAAGACATCTCATTTGAGGTTCCCCTT...AATCAGGGTGATGCCCATCTTACTCATCCTTGGCTGCCCTTGGTCCGACACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR GCA 90 bp ATGACACAGTCTCAGGAGGTCCTGACAACATGTACTCAGGGTGGTCGGGGCACAGGCTCAGCGATTTTCTaGTCAATTTCATCACATGGC +
Preference number: 4 (lower is better)
Translates to: MTQSQEVLTTCTQGGRGTGSAIF*SISSHG
Trigger: GCCATGTGATGAAATTGAGCAGAAAATCGCTGAGCC...TGTGCCCCGACCACCCTGAGTACATGTTGTCAGGACCTCCTGAGACTGTGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405454.1
CDS-3UTR GCA 90 bp ATGACACAGTCTCAGGAGGTCCTGACAACATGTACTCAGGGTGGTCGGGGCACATTGGAAGATGATGACTaGCAAAGGTTGTACTTCCCC +
Preference number: 4 (lower is better)
Translates to: MTQSQEVLTTCTQGGRGTLEDDD*QRLYFP
Trigger: GGGGAAGTACAACCTTTGGCAGTCATCATCTTCCAA...TGTGCCCCGACCACCCTGAGTACATGTTGTCAGGACCTCCTGAGACTGTGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405454.1
CDS-3UTR CCA 90 bp GAGGTGTCGGACCAAGGGCAGCCAAGGATGAGTAAGATGGGCATCACCCTGATTAGACCCCACCCTATTTaGAAGATGATGACTGCCAAA +
Preference number: 4 (lower is better)
Translates to: EVSDQGQPRMSKMGITLIRPHPI*KMMTAK
Trigger: TTTGGCAGTCATCATCTTCCAAATAGGGTGGGGTCT...AATCAGGGTGATGCCCATCTTACTCATCCTTGGCTGCCCTTGGTCCGACACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR CCA 90 bp GAGTGTAAACTGATGGCTCAGGGCCTTCTCTGCCCTTTACTAGCCTTCATGATCGTAGATGTTCCCCTTTaGTGGCTGGTACAGGATGGC +
Preference number: 4 (lower is better)
Translates to: ECKLMAQGLLCPLLAFMIVDVPL*WLVQDG
Trigger: GCCATCCTGTACCAGCCACCAAAGGGGAACATCTAC...GATCATGAAGGCTAGTAAAGGGCAGAGAAGGCCCTGAGCCATCAGTTTACACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR CCA 90 bp GAGTGTAAACTGATGGCTCAGGGCCTTCTCTGCCCTTTACTAGCCTTCATGATCCAGTGGCACAGTGCCTaGAGACTGCCATGTAGATGT +
Preference number: 4 (lower is better)
Translates to: ECKLMAQGLLCPLLAFMIQWHSA*RLPCRC
Trigger: ACATCTACATGGCAGTCTCCAGGCACTGTGCCACTG...GATCATGAAGGCTAGTAAAGGGCAGAGAAGGCCCTGAGCCATCAGTTTACACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR CCA 90 bp GAGGTGTCGGACCAAGGGCAGCCAAGGATGAGTAAGATGGGCATCACCCTGATTGTCAGCTTTGTTGTATaGGGAGTAACTACACAGACC +
Preference number: 4 (lower is better)
Translates to: EVSDQGQPRMSKMGITLIVSFVV*GVTTQT
Trigger: GGTCTGTGTAGTTACTCCCCATACAACAAAGCTGAC...AATCAGGGTGATGCCCATCTTACTCATCCTTGGCTGCCCTTGGTCCGACACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR TCA 90 bp ACACGCTCCCATGACACAGTCTCAGGAGGTCCTGACAACATGTACTCAGGGTGGAATTGGTATAGACATTaGAGTGGAGGGAGGCGTTTT +
Preference number: 4 (lower is better)
Translates to: TRSHDTVSGGPDNMYSGWNWYRH*SGGRRF
Trigger: AAAACGCCTCCCTCCACTTCAATGTCTATACCAATT...CCACCCTGAGTACATGTTGTCAGGACCTCCTGAGACTGTGTCATGGGAGCGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405454.1
CDS-3UTR TCA 90 bp GAGGTGTCGGACCAAGGGCAGCCAAGGATGAGTAAGATGGGCATCACCCTGATTATGTTTTCACCGACTTaGCTTCTAGCGTTTGATCAC +
Preference number: 4 (lower is better)
Translates to: EVSDQGQPRMSKMGITLIMFSPT*LLAFDH
Trigger: GTGATCAAACGCTAGAAGTCAAGTCGGTGAAAACAT...AATCAGGGTGATGCCCATCTTACTCATCCTTGGCTGCCCTTGGTCCGACACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR GCA 90 bp GAGGTGTCGGACCAAGGGCAGCCAAGGATGAGTAAGATGGGCATCACCCTGATTACTACAGTGCTTGGTTaGATTCACATGACGTACCAT +
Preference number: 4 (lower is better)
Translates to: EVSDQGQPRMSKMGITLITTVLG*IHMTYH
Trigger: ATGGTACGTCATGTGAATGCAACCAAGCACTGTAGT...AATCAGGGTGATGCCCATCTTACTCATCCTTGGCTGCCCTTGGTCCGACACCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR CCA 90 bp ACACGCTCCCATGACACAGTCTCAGGAGGTCCTGACAACATGTACTCAGGGTGGAGGCGTTTTAAAACATaGGTCACCAGACATCAGTTG +
Preference number: 4 (lower is better)
Translates to: TRSHDTVSGGPDNMYSGWRRFKT*VTRHQL
Trigger: CAACTGATGTCTGGTGACCCATGTTTTAAAACGCCT...CCACCCTGAGTACATGTTGTCAGGACCTCCTGAGACTGTGTCATGGGAGCGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405454.1
CDS-3UTR CCA 90 bp GAGTGTAAACTGATGGCTCAGGGCCTTCTCTGCCCTTTACTAGCCTTCATGATCGCTGTGCTGCTCAACTaGATCCAGACCAGGTATTCT +
Preference number: 4 (lower is better)
Translates to: ECKLMAQGLLCPLLAFMIAVLLN*IQTRYS
Trigger: AGAATACCTGGTCTGGATCCAGTTGAGCAGCACAGC...GATCATGAAGGCTAGTAAAGGGCAGAGAAGGCCCTGAGCCATCAGTTTACACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR CCA 90 bp ATGATGTGCAGTGACCACAGAAGCCAGGTGCTTCCAAGGCACACAGTGGCACAGCTTCTAGCAACAAATTaGCTAAGTGGTCAACCTCTG +
Preference number: 4 (lower is better)
Translates to: MMCSDHRSQVLPRHTVAQLLATN*LSGQPL
Trigger: CAGAGGTTGACCACTTAGCCAATTTGTTGCTAGAAG...CTGTGCCACTGTGTGCCTTGGAAGCACCTGGCTTCTGTGGTCACTGCACATCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR TCA 90 bp TTGAGGACACGCTCCCATGACACAGTCTCAGGAGGTCCTGACAACATGTACTCATTCCAAGATGCACTTTaGGAGTCTCTCCACCTTTTC +
Preference number: 4 (lower is better)
Translates to: LRTRSHDTVSGGPDNMYSFQDAL*ESLHLF
Trigger: GAAAAGGTGGAGAGACTCTCAAAGTGCATCTTGGAA...TGAGTACATGTTGTCAGGACCTCCTGAGACTGTGTCATGGGAGCGTGTCCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405454.1
CDS-3UTR TCA 90 bp TTGAGGACACGCTCCCATGACACAGTCTCAGGAGGTCCTGACAACATGTACTCATCACTGGGCATCTGCTaGGTTTTTCTGAAGCTGTAT +
Preference number: 4 (lower is better)
Translates to: LRTRSHDTVSGGPDNMYSSLGIC*VFLKLY
Trigger: ATACAGCTTCAGAAAAACTCAGCAGATGCCCAGTGA...TGAGTACATGTTGTCAGGACCTCCTGAGACTGTGTCATGGGAGCGTGTCCTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405454.1
CDS-3UTR TCA 90 bp GAGGTGTCGGACCAAGGGCAGCCAAGGATGAGTAAGATGGGCATCACCCTGATTCACTGGAATCTAGGCTaGAGTCTTGACTTTGTAATA +
Preference number: 4 (lower is better)
Translates to: EVSDQGQPRMSKMGITLIHWNLG*SLDFVI
Trigger: TATTACAAAGTCAAGACTTCAGCCTAGATTCCAGTG...AATCAGGGTGATGCCCATCTTACTCATCCTTGGCTGCCCTTGGTCCGACACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR TCA 90 bp AGGACACGCTCCCATGACACAGTCTCAGGAGGTCCTGACAACATGTACTCAGGGCACTGGAATCTAGGCTaGAGTCTTGACTTTGTAATA +
Preference number: 4 (lower is better)
Translates to: RTRSHDTVSGGPDNMYSGHWNLG*SLDFVI
Trigger: TATTACAAAGTCAAGACTTCAGCCTAGATTCCAGTG...CCCTGAGTACATGTTGTCAGGACCTCCTGAGACTGTGTCATGGGAGCGTGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405454.1
CDS-3UTR TCA 90 bp CAAAGCATGAACACCCACACTTTATACAATGCTGTAGGTAGTGTAATAGGGAAGAGGAGGTGGGTCTCCTaGCTGGCCTGTGCATTCTCC +
Preference number: 4 (lower is better)
Translates to: QSMNTHTLYNAVGSVIGKRRWVS*LACAFS
Trigger: GGAGAATGCACAGGCCAGTCAGGAGACCCACCTCCT...CTTCCCTATTACACTACCTACAGCATTGTATAAAGTGTGGGTGTTCATGCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR TCA 90 bp ATGATGTGCAGTGACCACAGAAGCCAGGTGCTTCCAAGGCACACAGTGGCACAGTATATACTGGAAGCCTaGCACTTCAGAGTATGTACT +
Preference number: 4 (lower is better)
Translates to: MMCSDHRSQVLPRHTVAQYILEA*HFRVCT
Trigger: AGTACATACTCTGAAGTGTCAGGCTTCCAGTATATA...CTGTGCCACTGTGTGCCTTGGAAGCACCTGGCTTCTGTGGTCACTGCACATCAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR CCA 90 bp ATGACACAGTCTCAGGAGGTCCTGACAACATGTACTCAGGGTGGTCGGGGCACAAGAATCTTGTTTCACTaGGCATCTGCTGAGTTTTTC +
Preference number: 4 (lower is better)
Translates to: MTQSQEVLTTCTQGGRGTRILFH*ASAEFF
Trigger: GAAAAACTCAGCAGATGCCCAGTGAAACAAGATTCT...TGTGCCCCGACCACCCTGAGTACATGTTGTCAGGACCTCCTGAGACTGTGTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000405454.1
CDS-3UTR TCA 90 bp ATGACACAGTCTCAGGAGGTCCTGACAACATGTACTCAGGGTGGTCGGGGCACATCTGCTGAGTTTTTCTaGAGCTGTATCTTCTTTATC +
Preference number: 4 (lower is better)
Translates to: MTQSQEVLTTCTQGGRGTSAEFF*SCIFFI
Trigger: GATAAAGAAGATACAGCTTCAGAAAAACTCAGCAGA...TGTGCCCCGACCACCCTGAGTACATGTTGTCAGGACCTCCTGAGACTGTGTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000405454.1
CDS-3UTR TCA 90 bp ATGATGTGCAGTGACCACAGAAGCCAGGTGCTTCCAAGGCACACAGTGGCACAGTTGAAAGGACTGCACTaGAATTTGAACACAAAGTGT +
Preference number: 4 (lower is better)
Translates to: MMCSDHRSQVLPRHTVAQLKGLH*NLNTKC
Trigger: ACACTTTGTGTTCAAATTTCAGTGCAGTCCTTTCAA...CTGTGCCACTGTGTGCCTTGGAAGCACCTGGCTTCTGTGGTCACTGCACATCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR GCA 90 bp TTGAGGACACGCTCCCATGACACAGTCTCAGGAGGTCCTGACAACATGTACTCATCTGCTATTCCAAGATaGACTTTGAGAGTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: LRTRSHDTVSGGPDNMYSSAIPR*TLRVSP
Trigger: TGGAGAGACTCTCAAAGTGCATCTTGGAATAGCAGA...TGAGTACATGTTGTCAGGACCTCCTGAGACTGTGTCATGGGAGCGTGTCCTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405454.1
CDS-3UTR GCA 90 bp GAGTGTAAACTGATGGCTCAGGGCCTTCTCTGCCCTTTACTAGCCTTCATGATCCAACTCCTGTTGATGTaGTTCCCACTGAGGTATTTC +
Preference number: 4 (lower is better)
Translates to: ECKLMAQGLLCPLLAFMIQLLLM*FPLRYF
Trigger: GAAATACCTCAGTGGGAAGCACATCAACAGGAGTTG...GATCATGAAGGCTAGTAAAGGGCAGAGAAGGCCCTGAGCCATCAGTTTACACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR GCA 90 bp TGCATTCACATGACGTACCATCTAGAACTGACCAAACAGAATTTCAGAACTGCCAAGCAGCTGTCATGCTaGTACCCACCACCACTTCGG +
Preference number: 4 (lower is better)
Translates to: CIHMTYHLELTKQNFRTAKQLSC*YPPPLR
Trigger: CCGAAGTGGTGGTGGGTAGCAGCATGACAGCTGCTT...GGCAGTTCTGAAATTCTGTTTGGTCAGTTCTAGATGGTACGTCATGTGAATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR CCA 90 bp ATGACACAGTCTCAGGAGGTCCTGACAACATGTACTCAGGGTGGTCGGGGCACACCTGTCTTGTATTTTTaGTATCATAGCCTTCCAGTA +
Preference number: 4 (lower is better)
Translates to: MTQSQEVLTTCTQGGRGTPVLYF*YHSLPV
Trigger: TACTGGAAGGCTATGATACCAAAAATACAAGACAGG...TGTGCCCCGACCACCCTGAGTACATGTTGTCAGGACCTCCTGAGACTGTGTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000405454.1
CDS-3UTR CCA 90 bp TGCATTCACATGACGTACCATCTAGAACTGACCAAACAGAATTTCAGAACTGCCGATGTTCCCCTTTGGTaGCTGGTACAGGATGGCGGT +
Preference number: 4 (lower is better)
Translates to: CIHMTYHLELTKQNFRTADVPLW*LVQDGG
Trigger: ACCGCCATCCTGTACCAGCCACCAAAGGGGAACATC...GGCAGTTCTGAAATTCTGTTTGGTCAGTTCTAGATGGTACGTCATGTGAATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR CCA 90 bp ATGATGTGCAGTGACCACAGAAGCCAGGTGCTTCCAAGGCACACAGTGGCACAGTACAGAGAGCTAAAATaGAAACCTAGTAGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: MMCSDHRSQVLPRHTVAQYRELK*KPSSLH
Trigger: ATGCAGACTACTAGGTTTCCATTTTAGCTCTCTGTA...CTGTGCCACTGTGTGCCTTGGAAGCACCTGGCTTCTGTGGTCACTGCACATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR TCA 90 bp AACAAATCACTTTCGACACAGTGGGGAAGAAAACAGTACCTACAGAGAGCTAAAAAGGGCAGCCAAGGATaGGTAAGATGGGCATCACCC +
Preference number: 4 (lower is better)
Translates to: NKSLSTQWGRKQYLQRAKKGSQG*VRWASP
Trigger: GGGTGATGCCCATCTTACTCATCCTTGGCTGCCCTT...TTTAGCTCTCTGTAGGTACTGTTTTCTTCCCCACTGTGTCGAAAGTGATTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR GCA 90 bp GAGGTGTCGGACCAAGGGCAGCCAAGGATGAGTAAGATGGGCATCACCCTGATTTCACCAGACATCAGTTaGATACTGATCAAAACTTTA +
Preference number: 4 (lower is better)
Translates to: EVSDQGQPRMSKMGITLISPDIS*ILIKTL
Trigger: TAAAGTTTTGATCAGTATGCAACTGATGTCTGGTGA...AATCAGGGTGATGCCCATCTTACTCATCCTTGGCTGCCCTTGGTCCGACACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR GCA 90 bp AGGACACGCTCCCATGACACAGTCTCAGGAGGTCCTGACAACATGTACTCAGGGTCACCAGACATCAGTTaGATACTGATCAAAACTTTA +
Preference number: 4 (lower is better)
Translates to: RTRSHDTVSGGPDNMYSGSPDIS*ILIKTL
Trigger: TAAAGTTTTGATCAGTATGCAACTGATGTCTGGTGA...CCCTGAGTACATGTTGTCAGGACCTCCTGAGACTGTGTCATGGGAGCGTGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405454.1
CDS-3UTR GCA 90 bp GAGTGTAAACTGATGGCTCAGGGCCTTCTCTGCCCTTTACTAGCCTTCATGATCTCTGCTATTCCAAGATaGACTTTGAGAGTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: ECKLMAQGLLCPLLAFMISAIPR*TLRVSP
Trigger: TGGAGAGACTCTCAAAGTGCATCTTGGAATAGCAGA...GATCATGAAGGCTAGTAAAGGGCAGAGAAGGCCCTGAGCCATCAGTTTACACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR GCA 90 bp GTTAAGCTGGAATGGGAGGAGTGGTGGAGTTTAGGATTCTTGGTCAAGACTTTTCTCCTGACTGGCCTGTaGATTCTCCCAAACAAGATG +
Preference number: 4 (lower is better)
Translates to: VKLEWEEWWSLGFLVKTFLLTGL*ILPNKM
Trigger: CATCTTGTTTGGGAGAATGCACAGGCCAGTCAGGAG...AAAAGTCTTGACCAAGAATCCTAAACTCCACCACTCCTCCCATTCCAGCTTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR GCA 90 bp GAGTGTAAACTGATGGCTCAGGGCCTTCTCTGCCCTTTACTAGCCTTCATGATCTGTCTCTCAGAGCGTTaGTATATATACTGGAAGCCT +
Preference number: 4 (lower is better)
Translates to: ECKLMAQGLLCPLLAFMICLSER*YIYWKP
Trigger: AGGCTTCCAGTATATATAGCAACGCTCTGAGAGACA...GATCATGAAGGCTAGTAAAGGGCAGAGAAGGCCCTGAGCCATCAGTTTACACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR CCA 90 bp GAGTGTAAACTGATGGCTCAGGGCCTTCTCTGCCCTTTACTAGCCTTCATGATCAGGCGTTTTAAAACATaGGTCACCAGACATCAGTTG +
Preference number: 4 (lower is better)
Translates to: ECKLMAQGLLCPLLAFMIRRFKT*VTRHQL
Trigger: CAACTGATGTCTGGTGACCCATGTTTTAAAACGCCT...GATCATGAAGGCTAGTAAAGGGCAGAGAAGGCCCTGAGCCATCAGTTTACACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR CCA 90 bp TGTAGTCTAACATTTTCCCAAAGCATGAACACCCACACTTTATACAATGCTGTAGTGGCTGGTACAGGATaGCGGTGGGTCCTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: CSLTFSQSMNTHTLYNAVVAGTG*RWVLPE
Trigger: CTCTGGAAGGACCCACCGCCATCCTGTACCAGCCAC...TACAGCATTGTATAAAGTGTGGGTGTTCATGCTTTGGGAAAATGTTAGACTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR CCA 90 bp AACAAATCACTTTCGACACAGTGGGGAAGAAAACAGTACCTACAGAGAGCTAAAGGTGGGTCTCCTGACTaGCCTGTGCATTCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: NKSLSTQWGRKQYLQRAKGGSPD*PVHSPK
Trigger: TTTGGGAGAATGCACAGGCCAGTCAGGAGACCCACC...TTTAGCTCTCTGTAGGTACTGTTTTCTTCCCCACTGTGTCGAAAGTGATTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR CCA 90 bp GAGTGTAAACTGATGGCTCAGGGCCTTCTCTGCCCTTTACTAGCCTTCATGATCCGTTGCTATATATACTaGAAGCCTGACACTTCAGAG +
Preference number: 4 (lower is better)
Translates to: ECKLMAQGLLCPLLAFMIRCYIY*KPDTSE
Trigger: CTCTGAAGTGTCAGGCTTCCAGTATATATAGCAACG...GATCATGAAGGCTAGTAAAGGGCAGAGAAGGCCCTGAGCCATCAGTTTACACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR TCA 90 bp TGTAGTCTAACATTTTCCCAAAGCATGAACACCCACACTTTATACAATGCTGTAATTGACGAAGGGCACTaGGGAGAGCTCCTCGAGCTC +
Preference number: 4 (lower is better)
Translates to: CSLTFSQSMNTHTLYNAVIDEGH*GELLEL
Trigger: GAGCTCGAGGAGCTCTCCTCAGTGCCCTTCGTCAAT...TACAGCATTGTATAAAGTGTGGGTGTTCATGCTTTGGGAAAATGTTAGACTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR TCA 90 bp AACAAATCACTTTCGACACAGTGGGGAAGAAAACAGTACCTACAGAGAGCTAAACTAGATGACCGGGAGTaGCACGTGCTATACCCTGAT +
Preference number: 4 (lower is better)
Translates to: NKSLSTQWGRKQYLQRAKLDDRE*HVLYPD
Trigger: ATCAGGGTATAGCACGTGTCACTCCCGGTCATCTAG...TTTAGCTCTCTGTAGGTACTGTTTTCTTCCCCACTGTGTCGAAAGTGATTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR TCA 90 bp CAAAGCATGAACACCCACACTTTATACAATGCTGTAGGTAGTGTAATAGGGAAGCTCAGAGAAACTAGATaGCCGGGAGTGACACGTGCT +
Preference number: 4 (lower is better)
Translates to: QSMNTHTLYNAVGSVIGKLRETR*PGVTRA
Trigger: AGCACGTGTCACTCCCGGTCATCTAGTTTCTCTGAG...CTTCCCTATTACACTACCTACAGCATTGTATAAAGTGTGGGTGTTCATGCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR TCA 90 bp GTTAAGCTGGAATGGGAGGAGTGGTGGAGTTTAGGATTCTTGGTCAAGACTTTTTCCGCTGGGGTGTTCTaGAAGAAAAAGCAGGCTTTT +
Preference number: 4 (lower is better)
Translates to: VKLEWEEWWSLGFLVKTFSAGVF*KKKQAF
Trigger: AAAAGCCTGCTTTTTCTTTCAGAACACCCCAGCGGA...AAAAGTCTTGACCAAGAATCCTAAACTCCACCACTCCTCCCATTCCAGCTTAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR TCA 90 bp GAGTGTAAACTGATGGCTCAGGGCCTTCTCTGCCCTTTACTAGCCTTCATGATCCATTTTCCCAAAGCATaGACACCCACACTTTATACA +
Preference number: 4 (lower is better)
Translates to: ECKLMAQGLLCPLLAFMIHFPKA*TPTLYT
Trigger: TGTATAAAGTGTGGGTGTTCATGCTTTGGGAAAATG...GATCATGAAGGCTAGTAAAGGGCAGAGAAGGCCCTGAGCCATCAGTTTACACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR TCA 90 bp GAGTGTAAACTGATGGCTCAGGGCCTTCTCTGCCCTTTACTAGCCTTCATGATCACGGATCAGTTCACATaGAGACATAATGCAAGTCTT +
Preference number: 4 (lower is better)
Translates to: ECKLMAQGLLCPLLAFMITDQFT*RHNASL
Trigger: AAGACTTGCATTATGTCTTCATGTGAACTGATCCGT...GATCATGAAGGCTAGTAAAGGGCAGAGAAGGCCCTGAGCCATCAGTTTACACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR TCA 90 bp TATAAGCAGCCTTCAAAAACACCACAAAGGGGAGTCAACAATTCGAGTGTAAACTGCAACCCCGTCATATaGGCCCAGTTTGTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: YKQPSKTPQRGVNNSSVNCNPVI*AQFVSQ
Trigger: CTGAGAGACAAACTGGGCTCATATGACGGGGTTGCA...GTTTACACTCGAATTGTTGACTCCCCTTTGTGGTGTTTTTGAAGGCTGCTTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR GCA 90 bp TATAAGCAGCCTTCAAAAACACCACAAAGGGGAGTCAACAATTCGAGTGTAAACCCAGCGAACACAGTTTaGTTGTACCACCTCCCTGGA +
Preference number: 4 (lower is better)
Translates to: YKQPSKTPQRGVNNSSVNPANTV*LYHLPG
Trigger: TCCAGGGAGGTGGTACAAGCAAACTGTGTTCGCTGG...GTTTACACTCGAATTGTTGACTCCCCTTTGTGGTGTTTTTGAAGGCTGCTTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR GCA 90 bp GTTAAGCTGGAATGGGAGGAGTGGTGGAGTTTAGGATTCTTGGTCAAGACTTTTGTTTATCTGCTGTGCTaGTCAACTGGATCCAGACCA +
Preference number: 4 (lower is better)
Translates to: VKLEWEEWWSLGFLVKTFVYLLC*STGSRP
Trigger: TGGTCTGGATCCAGTTGAGCAGCACAGCAGATAAAC...AAAAGTCTTGACCAAGAATCCTAAACTCCACCACTCCTCCCATTCCAGCTTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR GCA 90 bp CAAAGCATGAACACCCACACTTTATACAATGCTGTAGGTAGTGTAATAGGGAAGGGGCATCACCCTGATTaGAGCACCTCTTACGTGTCT +
Preference number: 4 (lower is better)
Translates to: QSMNTHTLYNAVGSVIGKGHHPD*STSYVS
Trigger: AGACACGTAAGAGGTGCTGCAATCAGGGTGATGCCC...CTTCCCTATTACACTACCTACAGCATTGTATAAAGTGTGGGTGTTCATGCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR CCA 90 bp CAAAGCATGAACACCCACACTTTATACAATGCTGTAGGTAGTGTAATAGGGAAGGGCACCAAGTTCGTCTaGAACAGAGGCACTCTTTGC +
Preference number: 4 (lower is better)
Translates to: QSMNTHTLYNAVGSVIGKGTKFV*NRGTLC
Trigger: GCAAAGAGTGCCTCTGTTCCAGACGAACTTGGTGCC...CTTCCCTATTACACTACCTACAGCATTGTATAAAGTGTGGGTGTTCATGCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR CCA 90 bp GAGTGTAAACTGATGGCTCAGGGCCTTCTCTGCCCTTTACTAGCCTTCATGATCAGAATCTTGTTTCACTaGGCATCTGCTGAGTTTTTC +
Preference number: 4 (lower is better)
Translates to: ECKLMAQGLLCPLLAFMIRILFH*ASAEFF
Trigger: GAAAAACTCAGCAGATGCCCAGTGAAACAAGATTCT...GATCATGAAGGCTAGTAAAGGGCAGAGAAGGCCCTGAGCCATCAGTTTACACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR CCA 90 bp GTTAAGCTGGAATGGGAGGAGTGGTGGAGTTTAGGATTCTTGGTCAAGACTTTTTGTAGTGCTTGGGGGTaGTTCTGCAGCTCATCTAAT +
Preference number: 4 (lower is better)
Translates to: VKLEWEEWWSLGFLVKTFCSAWG*FCSSSN
Trigger: ATTAGATGAGCTGCAGAACCACCCCCAAGCACTACA...AAAAGTCTTGACCAAGAATCCTAAACTCCACCACTCCTCCCATTCCAGCTTAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR TCA 90 bp TGTAGTCTAACATTTTCCCAAAGCATGAACACCCACACTTTATACAATGCTGTAAGAAGAGGACCCCATTaGCGAAGGGCACTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: CSLTFSQSMNTHTLYNAVRRGPH*RRALRR
Trigger: TCTCCTCAGTGCCCTTCGTCAATGGGGTCCTCTTCT...TACAGCATTGTATAAAGTGTGGGTGTTCATGCTTTGGGAAAATGTTAGACTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR TCA 90 bp GTTAAGCTGGAATGGGAGGAGTGGTGGAGTTTAGGATTCTTGGTCAAGACTTTTGCAGGCTTTTCATTATaGTGTGCAGTGACCACAGAA +
Preference number: 4 (lower is better)
Translates to: VKLEWEEWWSLGFLVKTFAGFSL*CAVTTE
Trigger: TTCTGTGGTCACTGCACATCATAATGAAAAGCCTGC...AAAAGTCTTGACCAAGAATCCTAAACTCCACCACTCCTCCCATTCCAGCTTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR GCA 90 bp TGCATTCACATGACGTACCATCTAGAACTGACCAAACAGAATTTCAGAACTGCCCTCTACAATGTCATCTaGATCCACCCTGGTGTCATC +
Preference number: 4 (lower is better)
Translates to: CIHMTYHLELTKQNFRTALYNVI*IHPGVI
Trigger: GATGACACCAGGGTGGATGCAGATGACATTGTAGAG...GGCAGTTCTGAAATTCTGTTTGGTCAGTTCTAGATGGTACGTCATGTGAATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR GCA 90 bp TGTAGTCTAACATTTTCCCAAAGCATGAACACCCACACTTTATACAATGCTGTAACCACAGAAGCCAGGTaGTTCCAAGGCACACAGTGG +
Preference number: 4 (lower is better)
Translates to: CSLTFSQSMNTHTLYNAVTTEAR*FQGTQW
Trigger: CCACTGTGTGCCTTGGAAGCACCTGGCTTCTGTGGT...TACAGCATTGTATAAAGTGTGGGTGTTCATGCTTTGGGAAAATGTTAGACTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR CCA 90 bp CAAAGCATGAACACCCACACTTTATACAATGCTGTAGGTAGTGTAATAGGGAAGAGTCTGCATCAGTCATaGCAAGCAGCTGTCATGCTG +
Preference number: 4 (lower is better)
Translates to: QSMNTHTLYNAVGSVIGKSLHQS*QAAVML
Trigger: CAGCATGACAGCTGCTTGCCATGACTGATGCAGACT...CTTCCCTATTACACTACCTACAGCATTGTATAAAGTGTGGGTGTTCATGCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR CCA 90 bp GAGTGTAAACTGATGGCTCAGGGCCTTCTCTGCCCTTTACTAGCCTTCATGATCTTAGATCTTTCCACATaGAAACCGTCATGTAAGAAC +
Preference number: 4 (lower is better)
Translates to: ECKLMAQGLLCPLLAFMILDLST*KPSCKN
Trigger: GTTCTTACATGACGGTTTCCATGTGGAAAGATCTAA...GATCATGAAGGCTAGTAAAGGGCAGAGAAGGCCCTGAGCCATCAGTTTACACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR GCA 90 bp TGCATTCACATGACGTACCATCTAGAACTGACCAAACAGAATTTCAGAACTGCCGCCTGTGGCAGCACTTaGACTCATTTTGCACATAAA +
Preference number: 4 (lower is better)
Translates to: CIHMTYHLELTKQNFRTAACGST*THFAHK
Trigger: TTTATGTGCAAAATGAGTGCAAGTGCTGCCACAGGC...GGCAGTTCTGAAATTCTGTTTGGTCAGTTCTAGATGGTACGTCATGTGAATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR GCA 90 bp TATAAGCAGCCTTCAAAAACACCACAAAGGGGAGTCAACAATTCGAGTGTAAACACCGGGAGTGACACGTaGTATACCCTGATACTTTTG +
Preference number: 4 (lower is better)
Translates to: YKQPSKTPQRGVNNSSVNTGSDT*YTLILL
Trigger: CAAAAGTATCAGGGTATAGCACGTGTCACTCCCGGT...GTTTACACTCGAATTGTTGACTCCCCTTTGTGGTGTTTTTGAAGGCTGCTTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR GCA 90 bp TGCATTCACATGACGTACCATCTAGAACTGACCAAACAGAATTTCAGAACTGCCGGCTCAGCGATTTTCTaGTCAATTTCATCACATGGC +
Preference number: 4 (lower is better)
Translates to: CIHMTYHLELTKQNFRTAGSAIF*SISSHG
Trigger: GCCATGTGATGAAATTGAGCAGAAAATCGCTGAGCC...GGCAGTTCTGAAATTCTGTTTGGTCAGTTCTAGATGGTACGTCATGTGAATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR GCA 90 bp TGTAGTCTAACATTTTCCCAAAGCATGAACACCCACACTTTATACAATGCTGTAGTAGTGAGCAACGATTaGGCCACTACACTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: CSLTFSQSMNTHTLYNAVVVSND*ATTLQP
Trigger: AGGCTGGAGTGTAGTGGCGCAATCGTTGCTCACTAC...TACAGCATTGTATAAAGTGTGGGTGTTCATGCTTTGGGAAAATGTTAGACTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR CCA 90 bp CAAAGCATGAACACCCACACTTTATACAATGCTGTAGGTAGTGTAATAGGGAAGGTAAACAGCGGCGAGTaGTATTTCCTGATCCAGCAA +
Preference number: 4 (lower is better)
Translates to: QSMNTHTLYNAVGSVIGKVNSGE*YFLIQQ
Trigger: TTGCTGGATCAGGAAATACCACTCGCCGCTGTTTAC...CTTCCCTATTACACTACCTACAGCATTGTATAAAGTGTGGGTGTTCATGCTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR CCA 90 bp CAAAGCATGAACACCCACACTTTATACAATGCTGTAGGTAGTGTAATAGGGAAGCTGATAGTGTTAAGCTaGAATGGGAGGAGTGGTGGA +
Preference number: 4 (lower is better)
Translates to: QSMNTHTLYNAVGSVIGKLIVLS*NGRSGG
Trigger: TCCACCACTCCTCCCATTCCAGCTTAACACTATCAG...CTTCCCTATTACACTACCTACAGCATTGTATAAAGTGTGGGTGTTCATGCTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR TCA 90 bp GTTAAGCTGGAATGGGAGGAGTGGTGGAGTTTAGGATTCTTGGTCAAGACTTTTCATTTTGCACATAAATaGGAACTTCTTTCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: VKLEWEEWWSLGFLVKTFHFAHK*ELLSPA
Trigger: CGCTGGAGAAAGAAGTTCTCATTTATGTGCAAAATG...AAAAGTCTTGACCAAGAATCCTAAACTCCACCACTCCTCCCATTCCAGCTTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR TCA 90 bp AACAAATCACTTTCGACACAGTGGGGAAGAAAACAGTACCTACAGAGAGCTAAATTCCAAGATGCACTTTaGGAGTCTCTCCACCTTTTC +
Preference number: 4 (lower is better)
Translates to: NKSLSTQWGRKQYLQRAKFQDAL*ESLHLF
Trigger: GAAAAGGTGGAGAGACTCTCAAAGTGCATCTTGGAA...TTTAGCTCTCTGTAGGTACTGTTTTCTTCCCCACTGTGTCGAAAGTGATTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR TCA 90 bp CAAAGCATGAACACCCACACTTTATACAATGCTGTAGGTAGTGTAATAGGGAAGAGAGGCACTCTTTGCTaGAAGATCTGCTATTCCAAG +
Preference number: 4 (lower is better)
Translates to: QSMNTHTLYNAVGSVIGKRGTLC*KICYSK
Trigger: CTTGGAATAGCAGATCTTTCAGCAAAGAGTGCCTCT...CTTCCCTATTACACTACCTACAGCATTGTATAAAGTGTGGGTGTTCATGCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR TCA 90 bp CAAAGCATGAACACCCACACTTTATACAATGCTGTAGGTAGTGTAATAGGGAAGTCACTGGGCATCTGCTaGGTTTTTCTGAAGCTGTAT +
Preference number: 4 (lower is better)
Translates to: QSMNTHTLYNAVGSVIGKSLGIC*VFLKLY
Trigger: ATACAGCTTCAGAAAAACTCAGCAGATGCCCAGTGA...CTTCCCTATTACACTACCTACAGCATTGTATAAAGTGTGGGTGTTCATGCTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR TCA 90 bp GTTAAGCTGGAATGGGAGGAGTGGTGGAGTTTAGGATTCTTGGTCAAGACTTTTAGGCTTCTCTGTTTCTaGCCATATTACAATTCTCCT +
Preference number: 4 (lower is better)
Translates to: VKLEWEEWWSLGFLVKTFRLLCF*PYYNSP
Trigger: AGGAGAATTGTAATATGGTCAGAAACAGAGAAGCCT...AAAAGTCTTGACCAAGAATCCTAAACTCCACCACTCCTCCCATTCCAGCTTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR TCA 90 bp TGCATTCACATGACGTACCATCTAGAACTGACCAAACAGAATTTCAGAACTGCCGACTGCACTGAAATTTaGACACAAAGTGTGCCAATG +
Preference number: 4 (lower is better)
Translates to: CIHMTYHLELTKQNFRTADCTEI*TQSVPM
Trigger: CATTGGCACACTTTGTGTTCAAATTTCAGTGCAGTC...GGCAGTTCTGAAATTCTGTTTGGTCAGTTCTAGATGGTACGTCATGTGAATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR GCA 90 bp TATAAGCAGCCTTCAAAAACACCACAAAGGGGAGTCAACAATTCGAGTGTAAACTTGGAAGATGATGACTaGCAAAGGTTGTACTTCCCC +
Preference number: 4 (lower is better)
Translates to: YKQPSKTPQRGVNNSSVNLEDDD*QRLYFP
Trigger: GGGGAAGTACAACCTTTGGCAGTCATCATCTTCCAA...GTTTACACTCGAATTGTTGACTCCCCTTTGTGGTGTTTTTGAAGGCTGCTTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR GCA 90 bp TATAAGCAGCCTTCAAAAACACCACAAAGGGGAGTCAACAATTCGAGTGTAAACAAGGTTTATCTGCTGTaGTGCTCAACTGGATCCAGA +
Preference number: 4 (lower is better)
Translates to: YKQPSKTPQRGVNNSSVNKVYLL*CSTGSR
Trigger: TCTGGATCCAGTTGAGCAGCACAGCAGATAAACCTT...GTTTACACTCGAATTGTTGACTCCCCTTTGTGGTGTTTTTGAAGGCTGCTTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR CCA 90 bp TGCATTCACATGACGTACCATCTAGAACTGACCAAACAGAATTTCAGAACTGCCTGCTGTTTTCTCCGCTaGGGTGTTCTGAAAGAAAAA +
Preference number: 4 (lower is better)
Translates to: CIHMTYHLELTKQNFRTACCFLR*GVLKEK
Trigger: TTTTTCTTTCAGAACACCCCAGCGGAGAAAACAGCA...GGCAGTTCTGAAATTCTGTTTGGTCAGTTCTAGATGGTACGTCATGTGAATGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR TCA 90 bp TATAAGCAGCCTTCAAAAACACCACAAAGGGGAGTCAACAATTCGAGTGTAAACTCAACTCGCTTCAGCTaGGATTCTACAGAATCTTGT +
Preference number: 4 (lower is better)
Translates to: YKQPSKTPQRGVNNSSVNSTRFS*DSTESC
Trigger: ACAAGATTCTGTAGAATCTCAGCTGAAGCGAGTTGA...GTTTACACTCGAATTGTTGACTCCCCTTTGTGGTGTTTTTGAAGGCTGCTTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR GCA 90 bp CAAAGCATGAACACCCACACTTTATACAATGCTGTAGGTAGTGTAATAGGGAAGACTCTAAGGTTTATCTaGTGTGCTGCTCAACTGGAT +
Preference number: 4 (lower is better)
Translates to: QSMNTHTLYNAVGSVIGKTLRFI*CAAQLD
Trigger: ATCCAGTTGAGCAGCACAGCAGATAAACCTTAGAGT...CTTCCCTATTACACTACCTACAGCATTGTATAAAGTGTGGGTGTTCATGCTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR CCA 90 bp TGTAGTCTAACATTTTCCCAAAGCATGAACACCCACACTTTATACAATGCTGTAGATCTAGGATGCCTGTaGCAGCACTTGCACTCATTT +
Preference number: 4 (lower is better)
Translates to: CSLTFSQSMNTHTLYNAVDLGCL*QHLHSF
Trigger: AAATGAGTGCAAGTGCTGCCACAGGCATCCTAGATC...TACAGCATTGTATAAAGTGTGGGTGTTCATGCTTTGGGAAAATGTTAGACTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR CCA 90 bp GTTAAGCTGGAATGGGAGGAGTGGTGGAGTTTAGGATTCTTGGTCAAGACTTTTCCTGTCTTGTATTTTTaGTATCATAGCCTTCCAGTA +
Preference number: 4 (lower is better)
Translates to: VKLEWEEWWSLGFLVKTFPVLYF*YHSLPV
Trigger: TACTGGAAGGCTATGATACCAAAAATACAAGACAGG...AAAAGTCTTGACCAAGAATCCTAAACTCCACCACTCCTCCCATTCCAGCTTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR CCA 90 bp GTTAAGCTGGAATGGGAGGAGTGGTGGAGTTTAGGATTCTTGGTCAAGACTTTTATCCACATTAGCTGTTaGTATAAGCAGCCTTCAAAA +
Preference number: 4 (lower is better)
Translates to: VKLEWEEWWSLGFLVKTFIHISC*YKQPSK
Trigger: TTTTGAAGGCTGCTTATACCAACAGCTAATGTGGAT...AAAAGTCTTGACCAAGAATCCTAAACTCCACCACTCCTCCCATTCCAGCTTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR CCA 90 bp TGTAGTCTAACATTTTCCCAAAGCATGAACACCCACACTTTATACAATGCTGTAGAATGGGAGGAGTGGTaGAGTTTAGGATTCTTGGTC +
Preference number: 4 (lower is better)
Translates to: CSLTFSQSMNTHTLYNAVEWEEW*SLGFLV
Trigger: GACCAAGAATCCTAAACTCCACCACTCCTCCCATTC...TACAGCATTGTATAAAGTGTGGGTGTTCATGCTTTGGGAAAATGTTAGACTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR TCA 90 bp TGCATTCACATGACGTACCATCTAGAACTGACCAAACAGAATTTCAGAACTGCCTTGACTTCTAGCGTTTaGTCACAACTTGTTCATAAG +
Preference number: 4 (lower is better)
Translates to: CIHMTYHLELTKQNFRTALTSSV*SQLVHK
Trigger: CTTATGAACAAGTTGTGATCAAACGCTAGAAGTCAA...GGCAGTTCTGAAATTCTGTTTGGTCAGTTCTAGATGGTACGTCATGTGAATGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR TCA 90 bp TGCATTCACATGACGTACCATCTAGAACTGACCAAACAGAATTTCAGAACTGCCCTACATTTTGACTCCTaGAACCAGCAGATCTTAATA +
Preference number: 4 (lower is better)
Translates to: CIHMTYHLELTKQNFRTALHFDS*NQQILI
Trigger: TATTAAGATCTGCTGGTTTCAGGAGTCAAAATGTAG...GGCAGTTCTGAAATTCTGTTTGGTCAGTTCTAGATGGTACGTCATGTGAATGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR CCA 90 bp TGTAGTCTAACATTTTCCCAAAGCATGAACACCCACACTTTATACAATGCTGTAAGTGTTAAGCTGGAATaGGAGGAGTGGTGGAGTTTA +
Preference number: 4 (lower is better)
Translates to: CSLTFSQSMNTHTLYNAVSVKLE*EEWWSL
Trigger: TAAACTCCACCACTCCTCCCATTCCAGCTTAACACT...TACAGCATTGTATAAAGTGTGGGTGTTCATGCTTTGGGAAAATGTTAGACTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR CCA 90 bp CAAAGCATGAACACCCACACTTTATACAATGCTGTAGGTAGTGTAATAGGGAAGTTCAACTACAGTGCTTaGTTGCATTCACATGACGTA +
Preference number: 4 (lower is better)
Translates to: QSMNTHTLYNAVGSVIGKFNYSA*LHSHDV
Trigger: TACGTCATGTGAATGCAACCAAGCACTGTAGTTGAA...CTTCCCTATTACACTACCTACAGCATTGTATAAAGTGTGGGTGTTCATGCTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR CCA 90 bp CAAAGCATGAACACCCACACTTTATACAATGCTGTAGGTAGTGTAATAGGGAAGTTTCTCCATGGGATTTaGTCAACGCATATCAGTAAG +
Preference number: 4 (lower is better)
Translates to: QSMNTHTLYNAVGSVIGKFLHGI*STHISK
Trigger: CTTACTGATATGCGTTGACCAAATCCCATGGAGAAA...CTTCCCTATTACACTACCTACAGCATTGTATAAAGTGTGGGTGTTCATGCTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR CCA 90 bp AACAAATCACTTTCGACACAGTGGGGAAGAAAACAGTACCTACAGAGAGCTAAAGATGTCTTTTCTCCATaGGATTTGGTCAACGCATAT +
Preference number: 4 (lower is better)
Translates to: NKSLSTQWGRKQYLQRAKDVFSP*DLVNAY
Trigger: ATATGCGTTGACCAAATCCCATGGAGAAAAGACATC...TTTAGCTCTCTGTAGGTACTGTTTTCTTCCCCACTGTGTCGAAAGTGATTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR TCA 90 bp TGTAGTCTAACATTTTCCCAAAGCATGAACACCCACACTTTATACAATGCTGTAAATTGGTATAGACATTaGAGTGGAGGGAGGCGTTTT +
Preference number: 4 (lower is better)
Translates to: CSLTFSQSMNTHTLYNAVNWYRH*SGGRRF
Trigger: AAAACGCCTCCCTCCACTTCAATGTCTATACCAATT...TACAGCATTGTATAAAGTGTGGGTGTTCATGCTTTGGGAAAATGTTAGACTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR TCA 90 bp CAAAGCATGAACACCCACACTTTATACAATGCTGTAGGTAGTGTAATAGGGAAGTCTGCTGAGTTTTTCTaGAGCTGTATCTTCTTTATC +
Preference number: 4 (lower is better)
Translates to: QSMNTHTLYNAVGSVIGKSAEFF*SCIFFI
Trigger: GATAAAGAAGATACAGCTTCAGAAAAACTCAGCAGA...CTTCCCTATTACACTACCTACAGCATTGTATAAAGTGTGGGTGTTCATGCTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR TCA 90 bp CAAAGCATGAACACCCACACTTTATACAATGCTGTAGGTAGTGTAATAGGGAAGTCTTTTTCTACATTTTaGCTCCTGAAACCAGCAGAT +
Preference number: 4 (lower is better)
Translates to: QSMNTHTLYNAVGSVIGKSFSTF*LLKPAD
Trigger: ATCTGCTGGTTTCAGGAGTCAAAATGTAGAAAAAGA...CTTCCCTATTACACTACCTACAGCATTGTATAAAGTGTGGGTGTTCATGCTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR TCA 90 bp TATAAGCAGCCTTCAAAAACACCACAAAGGGGAGTCAACAATTCGAGTGTAAACTTATTTTTGCCAACGTaGAAACACCTAGACCAAAGT +
Preference number: 4 (lower is better)
Translates to: YKQPSKTPQRGVNNSSVNLFLPT*KHLDQS
Trigger: ACTTTGGTCTAGGTGTTTTCACGTTGGCAAAAATAA...GTTTACACTCGAATTGTTGACTCCCCTTTGTGGTGTTTTTGAAGGCTGCTTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR GCA 90 bp AACAAATCACTTTCGACACAGTGGGGAAGAAAACAGTACCTACAGAGAGCTAAAAGTATTGTATACATCTaGAAATTCTTCAACACTGGG +
Preference number: 4 (lower is better)
Translates to: NKSLSTQWGRKQYLQRAKSIVYI*KFFNTG
Trigger: CCCAGTGTTGAAGAATTTGCAGATGTATACAATACT...TTTAGCTCTCTGTAGGTACTGTTTTCTTCCCCACTGTGTCGAAAGTGATTTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR GCA 90 bp AACAAATCACTTTCGACACAGTGGGGAAGAAAACAGTACCTACAGAGAGCTAAACAGCTATTAACATTATaGGTAGTACCTAAGACAACA +
Preference number: 4 (lower is better)
Translates to: NKSLSTQWGRKQYLQRAKQLLTL*VVPKTT
Trigger: TGTTGTCTTAGGTACTACGCATAATGTTAATAGCTG...TTTAGCTCTCTGTAGGTACTGTTTTCTTCCCCACTGTGTCGAAAGTGATTTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR CCA 90 bp TATAAGCAGCCTTCAAAAACACCACAAAGGGGAGTCAACAATTCGAGTGTAAACAGAACAGAATACGGATaGAATCACTTCAGTAAAGTT +
Preference number: 4 (lower is better)
Translates to: YKQPSKTPQRGVNNSSVNRTEYG*NHFSKV
Trigger: AACTTTACTGAAGTGATTCCATCCGTATTCTGTTCT...GTTTACACTCGAATTGTTGACTCCCCTTTGTGGTGTTTTTGAAGGCTGCTTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS CCA 90 bp AAACTTCTTCTTCTTCATCATCGTGAGAGCCAGGCGCCTGCAAGCTaGGCGCACGGCCGGGCGCCGCCGCCTCAGCTTGGCCGAGCCCCG +
Preference number: 5 (lower is better)
Translates to: KLLLLHHRESQAPAS*AHGRAPPPQLGRAP
Trigger: CGGGGCTCGGCCAAGCTGAGGCGGCGGCGCCCGGCCGTGCGCCCAGCTTGCAGGCGCCTGGCTCTCACGATGATGAAGAAGAAGAAGTTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370035.8
ENST00000405454.1
CDS-3UTR CAA 90 bp ATGACACAGTCTCAGGAGGTCCTGACAACATGTACTCAGGGTGGTCGGGGCACACGCCGCCGCCTCAGCTaGGCCGAGCCCCGGATCAGC +
Preference number: 5 (lower is better)
Translates to: MTQSQEVLTTCTQGGRGTRRRLS*AEPRIS
Trigger: GCTGATCCGGGGCTCGGCCAAGCTGAGGCGGCGGCG...TGTGCCCCGACCACCCTGAGTACATGTTGTCAGGACCTCCTGAGACTGTGTCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405454.1
CDS-3UTR CAA 90 bp ATGATGTGCAGTGACCACAGAAGCCAGGTGCTTCCAAGGCACACAGTGGCACAGGAGGTGAGCGCCCTTTaGGTGCTCAGCTCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: MMCSDHRSQVLPRHTVAQEVSAL*VLSSPP
Trigger: CGGCGGCGAGCTGAGCACCAAAAGGGCGCTCACCTC...CTGTGCCACTGTGTGCCTTGGAAGCACCTGGCTTCTGTGGTCACTGCACATCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR CAA 90 bp ATGACACAGTCTCAGGAGGTCCTGACAACATGTACTCAGGGTGGTCGGGGCACAGAGGTGAGCGCCCTTTaGGTGCTCAGCTCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: MTQSQEVLTTCTQGGRGTEVSAL*VLSSPP
Trigger: CGGCGGCGAGCTGAGCACCAAAAGGGCGCTCACCTC...TGTGCCCCGACCACCCTGAGTACATGTTGTCAGGACCTCCTGAGACTGTGTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405454.1
CDS-3UTR CAA 90 bp AACAAATCACTTTCGACACAGTGGGGAAGAAAACAGTACCTACAGAGAGCTAAACGCCGCCGCCTCAGCTaGGCCGAGCCCCGGATCAGC +
Preference number: 5 (lower is better)
Translates to: NKSLSTQWGRKQYLQRAKRRRLS*AEPRIS
Trigger: GCTGATCCGGGGCTCGGCCAAGCTGAGGCGGCGGCG...TTTAGCTCTCTGTAGGTACTGTTTTCTTCCCCACTGTGTCGAAAGTGATTTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR CAA 90 bp ACACGCTCCCATGACACAGTCTCAGGAGGTCCTGACAACATGTACTCAGGGTGGTCCAGCGAACACAGTTaGCTTGTACCACCTCCCTGG +
Preference number: 5 (lower is better)
Translates to: TRSHDTVSGGPDNMYSGWSSEHS*LVPPPW
Trigger: CCAGGGAGGTGGTACAAGCAAACTGTGTTCGCTGGA...CCACCCTGAGTACATGTTGTCAGGACCTCCTGAGACTGTGTCATGGGAGCGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405454.1
CDS-3UTR CAA 90 bp ATGATGTGCAGTGACCACAGAAGCCAGGTGCTTCCAAGGCACACAGTGGCACAGTGTAGATGTTCCCCTTaGGTGGCTGGTACAGGATGG +
Preference number: 5 (lower is better)
Translates to: MMCSDHRSQVLPRHTVAQCRCSP*VAGTGW
Trigger: CCATCCTGTACCAGCCACCAAAGGGGAACATCTACA...CTGTGCCACTGTGTGCCTTGGAAGCACCTGGCTTCTGTGGTCACTGCACATCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR CAA 90 bp CCCATGACACAGTCTCAGGAGGTCCTGACAACATGTACTCAGGGTGGTCGGGGCCTTCCAGGGCACTATTaGGAAGATGATGACTGCCAA +
Preference number: 5 (lower is better)
Translates to: PMTQSQEVLTTCTQGGRGLPGHY*EDDDCQ
Trigger: TTGGCAGTCATCATCTTCCAAATAGTGCCCTGGAAG...GCCCCGACCACCCTGAGTACATGTTGTCAGGACCTCCTGAGACTGTGTCATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405454.1
CDS-3UTR CAA 90 bp TTGAGGACACGCTCCCATGACACAGTCTCAGGAGGTCCTGACAACATGTACTCAGATGACTGCCAAAGGTaGTACTTCCCCCAGGACCCA +
Preference number: 5 (lower is better)
Translates to: LRTRSHDTVSGGPDNMYSDDCQR*YFPQDP
Trigger: TGGGTCCTGGGGGAAGTACAACCTTTGGCAGTCATC...TGAGTACATGTTGTCAGGACCTCCTGAGACTGTGTCATGGGAGCGTGTCCTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405454.1
CDS-3UTR CAA 90 bp ATGATGTGCAGTGACCACAGAAGCCAGGTGCTTCCAAGGCACACAGTGGCACAGCAGACCCCACCCTATTaGGAAGATGATGACTGCCAA +
Preference number: 5 (lower is better)
Translates to: MMCSDHRSQVLPRHTVAQQTPPY*EDDDCQ
Trigger: TTGGCAGTCATCATCTTCCAAATAGGGTGGGGTCTG...CTGTGCCACTGTGTGCCTTGGAAGCACCTGGCTTCTGTGGTCACTGCACATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS TCA 90 bp GTGTTTTCACAAGCCCTCCAGGAGACTCTGATGCACACTAGGGCTTaGGAACCACTGACAGAGGGAAAGCGATTCATGGAAGAGGAGCGA +
Preference number: 5 (lower is better)
Translates to: VFSQALQETLMHTRA*EPLTEGKRFMEEER
Trigger: TCGCTCCTCTTCCATGAATCGCTTTCCCTCTGTCAGTGGTTCTCAAGCCCTAGTGTGCATCAGAGTCTCCTGGAGGGCTTGTGAAAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483371.1
CDS-3UTR CAA 90 bp CCCATGACACAGTCTCAGGAGGTCCTGACAACATGTACTCAGGGTGGTCGGGGCATTCCAAGATGCACTTaGAGAGTCTCTCCACCTTTT +
Preference number: 5 (lower is better)
Translates to: PMTQSQEVLTTCTQGGRGIPRCT*RVSPPF
Trigger: AAAAGGTGGAGAGACTCTCAAAGTGCATCTTGGAAT...GCCCCGACCACCCTGAGTACATGTTGTCAGGACCTCCTGAGACTGTGTCATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405454.1
CDS-3UTR CAA 90 bp CCCATGACACAGTCTCAGGAGGTCCTGACAACATGTACTCAGGGTGGTCGGGGCTATACCCTGATACTTTaGACTGCTGACTTGCATAGC +
Preference number: 5 (lower is better)
Translates to: PMTQSQEVLTTCTQGGRGYTLIL*TADLHS
Trigger: GCTATGCAAGTCAGCAGTCAAAAGTATCAGGGTATA...GCCCCGACCACCCTGAGTACATGTTGTCAGGACCTCCTGAGACTGTGTCATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405454.1
CDS-3UTR CAA 90 bp ACACGCTCCCATGACACAGTCTCAGGAGGTCCTGACAACATGTACTCAGGGTGGTACTTTCAACTCCTGTaGATGTGCTTCCCACTGAGG +
Preference number: 5 (lower is better)
Translates to: TRSHDTVSGGPDNMYSGWYFQLL*MCFPLR
Trigger: CCTCAGTGGGAAGCACATCAACAGGAGTTGAAAGTA...CCACCCTGAGTACATGTTGTCAGGACCTCCTGAGACTGTGTCATGGGAGCGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405454.1
CDS-3UTR CAA 90 bp GAGGTGTCGGACCAAGGGCAGCCAAGGATGAGTAAGATGGGCATCACCCTGATTGCGTTTGATCACAACTaGTTCATAAGCTCCAGACCC +
Preference number: 5 (lower is better)
Translates to: EVSDQGQPRMSKMGITLIAFDHN*FISSRP
Trigger: GGGTCTGGAGCTTATGAACAAGTTGTGATCAAACGC...AATCAGGGTGATGCCCATCTTACTCATCCTTGGCTGCCCTTGGTCCGACACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR CAA 90 bp ATGATGTGCAGTGACCACAGAAGCCAGGTGCTTCCAAGGCACACAGTGGCACAGTCATATGAGCCCAGTTaGTCTCTCAGAGCGTTGCTA +
Preference number: 5 (lower is better)
Translates to: MMCSDHRSQVLPRHTVAQSYEPS*SLRALL
Trigger: TAGCAACGCTCTGAGAGACAAACTGGGCTCATATGA...CTGTGCCACTGTGTGCCTTGGAAGCACCTGGCTTCTGTGGTCACTGCACATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS CCA 90 bp ACACACACACACACACAGAGAGAGAGAGAGAGATGTATCTATATTTaGGGCAGAGTGGGGGAAGAGAGAGAGCATGTGAGCACATGCGCC +
Preference number: 5 (lower is better)
Translates to: THTHTQRERERCIYI*GRVGEEREHVSTCA
Trigger: GGCGCATGTGCTCACATGCTCTCTCTCTTCCCCCACTCTGCCCCAAATATAGATACATCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483371.1
CDS-3UTR CAA 90 bp CCCATGACACAGTCTCAGGAGGTCCTGACAACATGTACTCAGGGTGGTCGGGGCGCACTTGCACTCATTTaGCACATAAATGAGAACTTC +
Preference number: 5 (lower is better)
Translates to: PMTQSQEVLTTCTQGGRGALALI*HINENF
Trigger: GAAGTTCTCATTTATGTGCAAAATGAGTGCAAGTGC...GCCCCGACCACCCTGAGTACATGTTGTCAGGACCTCCTGAGACTGTGTCATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405454.1
CDS-3UTR CAA 90 bp CCCATGACACAGTCTCAGGAGGTCCTGACAACATGTACTCAGGGTGGTCGGGGCGTCACCAGACATCAGTaGCATACTGATCAAAACTTT +
Preference number: 5 (lower is better)
Translates to: PMTQSQEVLTTCTQGGRGVTRHQ*HTDQNF
Trigger: AAAGTTTTGATCAGTATGCAACTGATGTCTGGTGAC...GCCCCGACCACCCTGAGTACATGTTGTCAGGACCTCCTGAGACTGTGTCATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405454.1
CDS-3UTR CAA 90 bp ATGACACAGTCTCAGGAGGTCCTGACAACATGTACTCAGGGTGGTCGGGGCACAGAACAGAGGCACTCTTaGCTGAAAGATCTGCTATTC +
Preference number: 5 (lower is better)
Translates to: MTQSQEVLTTCTQGGRGTEQRHS*LKDLLF
Trigger: GAATAGCAGATCTTTCAGCAAAGAGTGCCTCTGTTC...TGTGCCCCGACCACCCTGAGTACATGTTGTCAGGACCTCCTGAGACTGTGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405454.1
CDS-3UTR CAA 90 bp ACACGCTCCCATGACACAGTCTCAGGAGGTCCTGACAACATGTACTCAGGGTGGCAGCTGTATCAAGATTaGGCTCAGCGATTTTCTGCT +
Preference number: 5 (lower is better)
Translates to: TRSHDTVSGGPDNMYSGWQLYQD*AQRFSA
Trigger: AGCAGAAAATCGCTGAGCCAAATCTTGATACAGCTG...CCACCCTGAGTACATGTTGTCAGGACCTCCTGAGACTGTGTCATGGGAGCGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405454.1
CDS-3UTR CAA 90 bp GAGGTGTCGGACCAAGGGCAGCCAAGGATGAGTAAGATGGGCATCACCCTGATTCCTTCTAGCAACAAATaGGCTAAGTGGTCAACCTCT +
Preference number: 5 (lower is better)
Translates to: EVSDQGQPRMSKMGITLIPSSNK*AKWSTS
Trigger: AGAGGTTGACCACTTAGCCAATTTGTTGCTAGAAGG...AATCAGGGTGATGCCCATCTTACTCATCCTTGGCTGCCCTTGGTCCGACACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS GCA 90 bp AAAGCAAGGAGGGAGCTTCCAGGGCACTATTTGGAAGATGATGACTaGCAAAGGTTGTACTTCCCCCAGGACCCACAAATAGCCTTAGTC +
Preference number: 5 (lower is better)
Translates to: KARRELPGHYLEDDD*QRLYFPQDPQIALV
Trigger: GACTAAGGCTATTTGTGGGTCCTGGGGGAAGTACAACCTTTGGCAGTCATCATCTTCCAAATAGTGCCCTGGAAGCTCCCTCCTTGCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405454.1
CDS CCA 90 bp GTGGATCTCAAGGTGTGGTCAGGGACTAGCAGCATCAGCGTCTTGTaGGAATGCCTTAGTGATACAAAACTTCAGGCTCTAACCCAGATC +
Preference number: 5 (lower is better)
Translates to: VDLKVWSGTSSISVL*ECLSDTKLQALTQI
Trigger: GATCTGGGTTAGAGCCTGAAGTTTTGTATCACTAAGGCATTCCCACAAGACGCTGATGCTGCTAGTCCCTGACCACACCTTGAGATCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483371.1
CDS-3UTR CAA 90 bp TTGAGGACACGCTCCCATGACACAGTCTCAGGAGGTCCTGACAACATGTACTCACTGCAAAGCCCAGCTTaGCATAAGCTTTTCCACCTT +
Preference number: 5 (lower is better)
Translates to: LRTRSHDTVSGGPDNMYSLQSPA*HKLFHL
Trigger: AAGGTGGAAAAGCTTATGCAAAGCTGGGCTTTGCAG...TGAGTACATGTTGTCAGGACCTCCTGAGACTGTGTCATGGGAGCGTGTCCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405454.1
CDS-3UTR CAA 90 bp GAGGTGTCGGACCAAGGGCAGCCAAGGATGAGTAAGATGGGCATCACCCTGATTGAGAAGAAACCAGCATaGGCTTTCCTCTTGATAGTT +
Preference number: 5 (lower is better)
Translates to: EVSDQGQPRMSKMGITLIEKKPA*AFLLIV
Trigger: AACTATCAAGAGGAAAGCCAATGCTGGTTTCTTCTC...AATCAGGGTGATGCCCATCTTACTCATCCTTGGCTGCCCTTGGTCCGACACCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR CAA 90 bp ACACGCTCCCATGACACAGTCTCAGGAGGTCCTGACAACATGTACTCAGGGTGGTATGTAAGAAGTACATaGGTTCCATCCAGAAAGGCG +
Preference number: 5 (lower is better)
Translates to: TRSHDTVSGGPDNMYSGWYVRST*VPSRKA
Trigger: CGCCTTTCTGGATGGAACCAATGTACTTCTTACATA...CCACCCTGAGTACATGTTGTCAGGACCTCCTGAGACTGTGTCATGGGAGCGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405454.1
CDS-3UTR CAA 90 bp ATGATGTGCAGTGACCACAGAAGCCAGGTGCTTCCAAGGCACACAGTGGCACAGAATGGATCCAGACTTTaGCTGACTACAGAAGACATA +
Preference number: 5 (lower is better)
Translates to: MMCSDHRSQVLPRHTVAQNGSRL*LTTEDI
Trigger: TATGTCTTCTGTAGTCAGCAAAAGTCTGGATCCATT...CTGTGCCACTGTGTGCCTTGGAAGCACCTGGCTTCTGTGGTCACTGCACATCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS TCA 90 bp GAATGCCTTAGTGATACAAAACTTCAGGCTCTAACCCAGATCTACTaGATCGAACACTCTGGCTGCTGCCGCCAGCAACCTGTGTTTTCA +
Preference number: 5 (lower is better)
Translates to: ECLSDTKLQALTQIY*IEHSGCCRQQPVFS
Trigger: TGAAAACACAGGTTGCTGGCGGCAGCAGCCAGAGTGTTCGATTCAGTAGATCTGGGTTAGAGCCTGAAGTTTTGTATCACTAAGGCATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483371.1
CDS-3UTR CAA 90 bp AGGACACGCTCCCATGACACAGTCTCAGGAGGTCCTGACAACATGTACTCAGGGACCTTTTCTATCTTCTaGCAAAGATTCAGATTCACC +
Preference number: 5 (lower is better)
Translates to: RTRSHDTVSGGPDNMYSGTFSIF*QRFRFT
Trigger: GGTGAATCTGAATCTTTGCAAGAAGATAGAAAAGGT...CCCTGAGTACATGTTGTCAGGACCTCCTGAGACTGTGTCATGGGAGCGTGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405454.1
CDS-3UTR CAA 90 bp TTGAGGACACGCTCCCATGACACAGTCTCAGGAGGTCCTGACAACATGTACTCAAGATTCTACAGAATCTaGTTTCACTGGGCATCTGCT +
Preference number: 5 (lower is better)
Translates to: LRTRSHDTVSGGPDNMYSRFYRI*FHWASA
Trigger: AGCAGATGCCCAGTGAAACAAGATTCTGTAGAATCT...TGAGTACATGTTGTCAGGACCTCCTGAGACTGTGTCATGGGAGCGTGTCCTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405454.1
CDS-3UTR CAA 90 bp AACAAATCACTTTCGACACAGTGGGGAAGAAAACAGTACCTACAGAGAGCTAAAGCGAACACAGTTTGCTaGTACCACCTCCCTGGAGGA +
Preference number: 5 (lower is better)
Translates to: NKSLSTQWGRKQYLQRAKANTVC*YHLPGG
Trigger: TCCTCCAGGGAGGTGGTACAAGCAAACTGTGTTCGC...TTTAGCTCTCTGTAGGTACTGTTTTCTTCCCCACTGTGTCGAAAGTGATTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR CAA 90 bp AACAAATCACTTTCGACACAGTGGGGAAGAAAACAGTACCTACAGAGAGCTAAATCCAGCGAACACAGTTaGCTTGTACCACCTCCCTGG +
Preference number: 5 (lower is better)
Translates to: NKSLSTQWGRKQYLQRAKSSEHS*LVPPPW
Trigger: CCAGGGAGGTGGTACAAGCAAACTGTGTTCGCTGGA...TTTAGCTCTCTGTAGGTACTGTTTTCTTCCCCACTGTGTCGAAAGTGATTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR CAA 90 bp GAGTGTAAACTGATGGCTCAGGGCCTTCTCTGCCCTTTACTAGCCTTCATGATCATTCCAAGATGCACTTaGAGAGTCTCTCCACCTTTT +
Preference number: 5 (lower is better)
Translates to: ECKLMAQGLLCPLLAFMIIPRCT*RVSPPF
Trigger: AAAAGGTGGAGAGACTCTCAAAGTGCATCTTGGAAT...GATCATGAAGGCTAGTAAAGGGCAGAGAAGGCCCTGAGCCATCAGTTTACACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR CAA 90 bp CAAAGCATGAACACCCACACTTTATACAATGCTGTAGGTAGTGTAATAGGGAAGGATGACTGCCAAAGGTaGTACTTCCCCCAGGACCCA +
Preference number: 5 (lower is better)
Translates to: QSMNTHTLYNAVGSVIGKDDCQR*YFPQDP
Trigger: TGGGTCCTGGGGGAAGTACAACCTTTGGCAGTCATC...CTTCCCTATTACACTACCTACAGCATTGTATAAAGTGTGGGTGTTCATGCTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR CAA 90 bp AACAAATCACTTTCGACACAGTGGGGAAGAAAACAGTACCTACAGAGAGCTAAATGTAGTGAGCAACGATaGCGCCACTACACTCCAGCC +
Preference number: 5 (lower is better)
Translates to: NKSLSTQWGRKQYLQRAKCSEQR*RHYTPA
Trigger: GGCTGGAGTGTAGTGGCGCAATCGTTGCTCACTACA...TTTAGCTCTCTGTAGGTACTGTTTTCTTCCCCACTGTGTCGAAAGTGATTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR CAA 90 bp TGTAGTCTAACATTTTCCCAAAGCATGAACACCCACACTTTATACAATGCTGTAAGGTGGGAGGCTCATTaGAGCCTGGGAGTTGGGAGG +
Preference number: 5 (lower is better)
Translates to: CSLTFSQSMNTHTLYNAVRWEAH*SLGVGR
Trigger: CCTCCCAACTCCCAGGCTCAAATGAGCCTCCCACCT...TACAGCATTGTATAAAGTGTGGGTGTTCATGCTTTGGGAAAATGTTAGACTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS TCA 90 bp ACAATGTCATCTGCATCCACCCTGGTGTCATCAACTCGCTTCAGCTaGGATTCTACAGAATCTTGTTTCACTGGGCATCTGCTGAGTTTT +
Preference number: 5 (lower is better)
Translates to: TMSSASTLVSSTRFS*DSTESCFTGHLLSF
Trigger: AAAACTCAGCAGATGCCCAGTGAAACAAGATTCTGTAGAATCTCAGCTGAAGCGAGTTGATGACACCAGGGTGGATGCAGATGACATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370035.8
ENST00000405454.1
ENST00000483371.1
CDS GCA 90 bp CAATTTCATCACATGGCTCTAGAATACTTTCAACTCCTGTTGATGTaGTTCCCACTGAGGTATTTCTCCTGTGGCAGAGCTCAGAGAAAC +
Preference number: 5 (lower is better)
Translates to: QFHHMALEYFQLLLM*FPLRYFSCGRAQRN
Trigger: GTTTCTCTGAGCTCTGCCACAGGAGAAATACCTCAGTGGGAAGCACATCAACAGGAGTTGAAAGTATTCTAGAGCCATGTGATGAAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370035.8
ENST00000405454.1
ENST00000483371.1
CDS CCA 90 bp GTCTTGTATTTTTGGTATCATAGCCTTCCAGTAAACAGCGGCGAGTaGTATTTCCTGATCCAGCAAACTCTGCCAGGTTTAGATCTGCAA +
Preference number: 5 (lower is better)
Translates to: VLYFWYHSLPVNSGE*YFLIQQTLPGLDLQ
Trigger: TTGCAGATCTAAACCTGGCAGAGTTTGCTGGATCAGGAAATACCACTCGCCGCTGTTTACTGGAAGGCTATGATACCAAAAATACAAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370035.8
ENST00000405454.1
CDS CCA 90 bp CAATCTGACATCGTTCCCCCACACCACAGCAGTTTCAAGTCCCTTTaGAACAATAAGGAATTCAACTTCACTGTTAGCCTCTACCTGATA +
Preference number: 5 (lower is better)
Translates to: QSDIVPPHHSSFKSL*NNKEFNFTVSLYLI
Trigger: TATCAGGTAGAGGCTAACAGTGAAGTTGAATTCCTTATTGTTCCAAAGGGACTTGAAACTGCTGTGGTGTGGGGGAACGATGTCAGATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483371.1
CDS TCA 90 bp AGCCTTAGTCCTTCTTCTTCCGCACTGGAATCTAGGCTGAAGTCTTaGCTTTGTAATATTTTCTCTACAATGTCATCTGCATCCACCCTG +
Preference number: 5 (lower is better)
Translates to: SLSPSSSALESRLKS*LCNIFSTMSSASTL
Trigger: CAGGGTGGATGCAGATGACATTGTAGAGAAAATATTACAAAGTCAAGACTTCAGCCTAGATTCCAGTGCGGAAGAAGAAGGACTAAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370035.8
ENST00000405454.1
ENST00000483371.1
CDS-3UTR CAA 90 bp CAAAGCATGAACACCCACACTTTATACAATGCTGTAGGTAGTGTAATAGGGAAGCTGCAAAGCCCAGCTTaGCATAAGCTTTTCCACCTT +
Preference number: 5 (lower is better)
Translates to: QSMNTHTLYNAVGSVIGKLQSPA*HKLFHL
Trigger: AAGGTGGAAAAGCTTATGCAAAGCTGGGCTTTGCAG...CTTCCCTATTACACTACCTACAGCATTGTATAAAGTGTGGGTGTTCATGCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS TCA 90 bp GAAAATCACCTTGGATATAATACTCATATCAAACACTCTGCAATCTaGCATCGTTCCCCCACACCACAGCAGTTTCAAGTCCCTTTGGAA +
Preference number: 5 (lower is better)
Translates to: ENHLGYNTHIKHSAI*HRSPTPQQFQVPLE
Trigger: TTCCAAAGGGACTTGAAACTGCTGTGGTGTGGGGGAACGATGTCAGATTGCAGAGTGTTTGATATGAGTATTATATCCAAGGTGATTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483371.1
CDS GCA 90 bp CAGGTGCCAATTACATATTTTCAGAACCAGGCTTCTTCCAGAGAATaGAGAACTGTGACCATTTTCCCTAGGGCACAATCATATTTGGAA +
Preference number: 5 (lower is better)
Translates to: QVPITYFQNQASSRE*RTVTIFPRAQSYLE
Trigger: TTCCAAATATGATTGTGCCCTAGGGAAAATGGTCACAGTTCTGCATTCTCTGGAAGAAGCCTGGTTCTGAAAATATGTAATTGGCACCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483371.1
CDS-3UTR CAA 90 bp CAAAGCATGAACACCCACACTTTATACAATGCTGTAGGTAGTGTAATAGGGAAGGAACAGAGGCACTCTTaGCTGAAAGATCTGCTATTC +
Preference number: 5 (lower is better)
Translates to: QSMNTHTLYNAVGSVIGKEQRHS*LKDLLF
Trigger: GAATAGCAGATCTTTCAGCAAAGAGTGCCTCTGTTC...CTTCCCTATTACACTACCTACAGCATTGTATAAAGTGTGGGTGTTCATGCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR CAA 90 bp TGCATTCACATGACGTACCATCTAGAACTGACCAAACAGAATTTCAGAACTGCCTATACCCTGATACTTTaGACTGCTGACTTGCATAGC +
Preference number: 5 (lower is better)
Translates to: CIHMTYHLELTKQNFRTAYTLIL*TADLHS
Trigger: GCTATGCAAGTCAGCAGTCAAAAGTATCAGGGTATA...GGCAGTTCTGAAATTCTGTTTGGTCAGTTCTAGATGGTACGTCATGTGAATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR CAA 90 bp TATAAGCAGCCTTCAAAAACACCACAAAGGGGAGTCAACAATTCGAGTGTAAACCAGCTGTATCAAGATTaGGCTCAGCGATTTTCTGCT +
Preference number: 5 (lower is better)
Translates to: YKQPSKTPQRGVNNSSVNQLYQD*AQRFSA
Trigger: AGCAGAAAATCGCTGAGCCAAATCTTGATACAGCTG...GTTTACACTCGAATTGTTGACTCCCCTTTGTGGTGTTTTTGAAGGCTGCTTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR CAA 90 bp TGCATTCACATGACGTACCATCTAGAACTGACCAAACAGAATTTCAGAACTGCCAGATTCTACAGAATCTaGTTTCACTGGGCATCTGCT +
Preference number: 5 (lower is better)
Translates to: CIHMTYHLELTKQNFRTARFYRI*FHWASA
Trigger: AGCAGATGCCCAGTGAAACAAGATTCTGTAGAATCT...GGCAGTTCTGAAATTCTGTTTGGTCAGTTCTAGATGGTACGTCATGTGAATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR CAA 90 bp TATAAGCAGCCTTCAAAAACACCACAAAGGGGAGTCAACAATTCGAGTGTAAACTTGTCTCTCAGAGCGTaGCTATATATACTGGAAGCC +
Preference number: 5 (lower is better)
Translates to: YKQPSKTPQRGVNNSSVNLSLRA*LYILEA
Trigger: GGCTTCCAGTATATATAGCAACGCTCTGAGAGACAA...GTTTACACTCGAATTGTTGACTCCCCTTTGTGGTGTTTTTGAAGGCTGCTTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR CAA 90 bp TATAAGCAGCCTTCAAAAACACCACAAAGGGGAGTCAACAATTCGAGTGTAAACAACTACAGTGCTTGGTaGCATTCACATGACGTACCA +
Preference number: 5 (lower is better)
Translates to: YKQPSKTPQRGVNNSSVNNYSAW*HSHDVP
Trigger: TGGTACGTCATGTGAATGCAACCAAGCACTGTAGTT...GTTTACACTCGAATTGTTGACTCCCCTTTGTGGTGTTTTTGAAGGCTGCTTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR CAA 90 bp TGCATTCACATGACGTACCATCTAGAACTGACCAAACAGAATTTCAGAACTGCCGCACTTGCACTCATTTaGCACATAAATGAGAACTTC +
Preference number: 5 (lower is better)
Translates to: CIHMTYHLELTKQNFRTAALALI*HINENF
Trigger: GAAGTTCTCATTTATGTGCAAAATGAGTGCAAGTGC...GGCAGTTCTGAAATTCTGTTTGGTCAGTTCTAGATGGTACGTCATGTGAATGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR CAA 90 bp TGTAGTCTAACATTTTCCCAAAGCATGAACACCCACACTTTATACAATGCTGTATACTTTCAACTCCTGTaGATGTGCTTCCCACTGAGG +
Preference number: 5 (lower is better)
Translates to: CSLTFSQSMNTHTLYNAVYFQLL*MCFPLR
Trigger: CCTCAGTGGGAAGCACATCAACAGGAGTTGAAAGTA...TACAGCATTGTATAAAGTGTGGGTGTTCATGCTTTGGGAAAATGTTAGACTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR CAA 90 bp TGCATTCACATGACGTACCATCTAGAACTGACCAAACAGAATTTCAGAACTGCCGCATTGGCTTTCCTCTaGATAGTTGAGGTTCATTTT +
Preference number: 5 (lower is better)
Translates to: CIHMTYHLELTKQNFRTAALAFL*IVEVHF
Trigger: AAAATGAACCTCAACTATCAAGAGGAAAGCCAATGC...GGCAGTTCTGAAATTCTGTTTGGTCAGTTCTAGATGGTACGTCATGTGAATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS CCA 90 bp CTTGACTTTGTAATATTTTCTCTACAATGTCATCTGCATCCACCCTaGTGTCATCAACTCGCTTCAGCTGAGATTCTACAGAATCTTGTT +
Preference number: 5 (lower is better)
Translates to: LDFVIFSLQCHLHPP*CHQLASAEILQNLV
Trigger: AACAAGATTCTGTAGAATCTCAGCTGAAGCGAGTTGATGACACCAGGGTGGATGCAGATGACATTGTAGAGAAAATATTACAAAGTCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370035.8
ENST00000405454.1
ENST00000483371.1
CDS-3UTR CAA 90 bp TATAAGCAGCCTTCAAAAACACCACAAAGGGGAGTCAACAATTCGAGTGTAAACGTCACCAGACATCAGTaGCATACTGATCAAAACTTT +
Preference number: 5 (lower is better)
Translates to: YKQPSKTPQRGVNNSSVNVTRHQ*HTDQNF
Trigger: AAAGTTTTGATCAGTATGCAACTGATGTCTGGTGAC...GTTTACACTCGAATTGTTGACTCCCCTTTGTGGTGTTTTTGAAGGCTGCTTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR CAA 90 bp TGCATTCACATGACGTACCATCTAGAACTGACCAAACAGAATTTCAGAACTGCCACCTTTTCTATCTTCTaGCAAAGATTCAGATTCACC +
Preference number: 5 (lower is better)
Translates to: CIHMTYHLELTKQNFRTATFSIF*QRFRFT
Trigger: GGTGAATCTGAATCTTTGCAAGAAGATAGAAAAGGT...GGCAGTTCTGAAATTCTGTTTGGTCAGTTCTAGATGGTACGTCATGTGAATGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS-3UTR CAA 90 bp TGCATTCACATGACGTACCATCTAGAACTGACCAAACAGAATTTCAGAACTGCCTGGAGTTTAGGATTCTaGGTCAAGACTTTTTCAAGA +
Preference number: 5 (lower is better)
Translates to: CIHMTYHLELTKQNFRTAWSLGF*VKTFSR
Trigger: TCTTGAAAAAGTCTTGACCAAGAATCCTAAACTCCA...GGCAGTTCTGAAATTCTGTTTGGTCAGTTCTAGATGGTACGTCATGTGAATGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS GCA 90 bp GTATCTTCTTTATCAGCTGTATCAAGATTTGGCTCAGCGATTTTCTaGTCAATTTCATCACATGGCTCTAGAATACTTTCAACTCCTGTT +
Preference number: 5 (lower is better)
Translates to: VSSLSAVSRFGSAIF*SISSHGSRILSTPV
Trigger: AACAGGAGTTGAAAGTATTCTAGAGCCATGTGATGAAATTGAGCAGAAAATCGCTGAGCCAAATCTTGATACAGCTGATAAAGAAGATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370035.8
ENST00000405454.1
ENST00000483371.1
CDS-3UTR CAA 90 bp TGTAGTCTAACATTTTCCCAAAGCATGAACACCCACACTTTATACAATGCTGTATACCACTTAAGTCCCTaGGTTAGGCTAAAATGTTCA +
Preference number: 5 (lower is better)
Translates to: CSLTFSQSMNTHTLYNAVYHLSP*VRLKCS
Trigger: TGAACATTTTAGCCTAACCAAGGGACTTAAGTGGTA...TACAGCATTGTATAAAGTGTGGGTGTTCATGCTTTGGGAAAATGTTAGACTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370035.8
CDS CAA 90 bp GGGGAGCGGTCGTGCTGCAGCTCGCCCGGGGAGGTGAGCGCCCTTTaGGTGCTCAGCTCGCCGCCGCCGCCGCCGCCGCCTCCGCCGCCG +
Preference number: 6 (lower is better)
Translates to: GERSCCSSPGEVSAL*VLSSPPPPPPPPPP
Trigger: CGGCGGCGGAGGCGGCGGCGGCGGCGGCGGCGAGCTGAGCACCAAAAGGGCGCTCACCTCCCCGGGCGAGCTGCAGCACGACCGCTCCCC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370035.8
ENST00000405454.1
CDS CAA 72 bp TCGTGCTGCAGCTCGCCCGGGGAGGTGAGCGCCCTTTaGGTGCTCAGCTCGCCGCCGCCGCCGCCGCCGCCT +
Preference number: 6 (lower is better)
Translates to: SCCSSPGEVSAL*VLSSPPPPPPP
Trigger: AGGCGGCGGCGGCGGCGGCGGCGAGCTGAGCACCAAAAGGGCGCTCACCTCCCCGGGCGAGCTGCAGCACGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370035.8
ENST00000405454.1
CDS CCA 72 bp CTTCTTCATCATCGTGAGAGCCAGGCGCCTGCAAGCTaGGCGCACGGCCGGGCGCCGCCGCCTCAGCTTGGC +
Preference number: 6 (lower is better)
Translates to: LLHHRESQAPAS*AHGRAPPPQLG
Trigger: GCCAAGCTGAGGCGGCGGCGCCCGGCCGTGCGCCCAGCTTGCAGGCGCCTGGCTCTCACGATGATGAAGAAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370035.8
ENST00000405454.1
CDS TCA 72 bp CAAGCCCTCCAGGAGACTCTGATGCACACTAGGGCTTaGGAACCACTGACAGAGGGAAAGCGATTCATGGAA +
Preference number: 6 (lower is better)
Translates to: QALQETLMHTRA*EPLTEGKRFME
Trigger: TTCCATGAATCGCTTTCCCTCTGTCAGTGGTTCTCAAGCCCTAGTGTGCATCAGAGTCTCCTGGAGGGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483371.1
CDS CCA 72 bp TCAGGCTCTAACCCAGATCTACTGAATCGAACACTCTaGCTGCTGCCGCCAGCAACCTGTGTTTTCACAAGC +
Preference number: 6 (lower is better)
Translates to: SGSNPDLLNRTL*LLPPATCVFTS
Trigger: GCTTGTGAAAACACAGGTTGCTGGCGGCAGCAGCCAGAGTGTTCGATTCAGTAGATCTGGGTTAGAGCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483371.1
CDS CCA 72 bp GCCAGAAGTGTGTCTGGAAATGTGGATCTCAAGGTGTaGTCAGGGACTAGCAGCATCAGCGTCTTGTGGGAA +
Preference number: 6 (lower is better)
Translates to: ARSVSGNVDLKV*SGTSSISVLWE
Trigger: TTCCCACAAGACGCTGATGCTGCTAGTCCCTGACCACACCTTGAGATCCACATTTCCAGACACACTTCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483371.1
CDS CAA 72 bp TGGAAGAGGAGCGACACCCGAGAGGCAGAAGCTGCTTaGCAGAAGTTGCAGGGTAATGGAACGGGAAAAATG +
Preference number: 6 (lower is better)
Translates to: WKRSDTREAEAA*QKLQGNGTGKM
Trigger: CATTTTTCCCGTTCCATTACCCTGCAACTTCTGCAAAGCAGCTTCTGCCTCTCGGGTGTCGCTCCTCTTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483371.1
CDS TCA 72 bp AGTGATACAAAACTTCAGGCTCTAACCCAGATCTACTaGATCGAACACTCTGGCTGCTGCCGCCAGCAACCT +
Preference number: 6 (lower is better)
Translates to: SDTKLQALTQIY*IEHSGCCRQQP
Trigger: AGGTTGCTGGCGGCAGCAGCCAGAGTGTTCGATTCAGTAGATCTGGGTTAGAGCCTGAAGTTTTGTATCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483371.1
CDS TCA 72 bp CTGTGGCAGAGCTCAGAGAAACTAGATGACCGGGAGTaGCACGTGCTATACCCTGTCAGAGAAAATCACCTT +
Preference number: 6 (lower is better)
Translates to: LWQSSEKLDDRE*HVLYPVRENHL
Trigger: AAGGTGATTTTCTCTGACAGGGTATAGCACGTGTCACTCCCGGTCATCTAGTTTCTCTGAGCTCTGCCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483371.1
CDS GCA 72 bp AAGCTCCAGACCCCACCCTATTTGGAAGATGATGACTaGCAAAGGTTGTACTTCCCCCAGGACCCACAAATA +
Preference number: 6 (lower is better)
Translates to: KLQTPPYLEDDD*QRLYFPQDPQI
Trigger: TATTTGTGGGTCCTGGGGGAAGTACAACCTTTGGCAGTCATCATCTTCCAAATAGGGTGGGGTCTGGAGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370035.8
ENST00000483371.1
CDS GCA 72 bp AGGGAGCTTCCAGGGCACTATTTGGAAGATGATGACTaGCAAAGGTTGTACTTCCCCCAGGACCCACAAATA +
Preference number: 6 (lower is better)
Translates to: RELPGHYLEDDD*QRLYFPQDPQI
Trigger: TATTTGTGGGTCCTGGGGGAAGTACAACCTTTGGCAGTCATCATCTTCCAAATAGTGCCCTGGAAGCTCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405454.1
CDS GCA 72 bp TGGTCAGGGACTAGCAGCATCAGCGTCTTGTGGGAATaGCTTAGTGATACAAAACTTCAGGCTCTAACCCAG +
Preference number: 6 (lower is better)
Translates to: WSGTSSISVLWE*LSDTKLQALTQ
Trigger: CTGGGTTAGAGCCTGAAGTTTTGTATCACTAAGGCATTCCCACAAGACGCTGATGCTGCTAGTCCCTGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483371.1
CDS GCA 72 bp GAGCTAGATGAGCAAGGAAAGGCACCGGGAAGAGCATaGCTTCTTTGTAGGGAAGCAGATCGTTTGGTAAAG +
Preference number: 6 (lower is better)
Translates to: ELDEQGKAPGRA*LLCREADRLVK
Trigger: CTTTACCAAACGATCTGCTTCCCTACAAAGAAGGCATGCTCTTCCCGGTGCCTTTCCTTGCTCATCTAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483371.1
CDS CAA 72 bp CTCAAGGTGTGGTCAGGGACTAGCAGCATCAGCGTCTaGTGGGAATGCCTTAGTGATACAAAACTTCAGGCT +
Preference number: 6 (lower is better)
Translates to: LKVWSGTSSISV*WECLSDTKLQA
Trigger: AGCCTGAAGTTTTGTATCACTAAGGCATTCCCACAAGACGCTGATGCTGCTAGTCCCTGACCACACCTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483371.1
CDS CAA 90 bp AAGCTCCAGACCCCACCCTATTTGGAAGATGATGACTGCCAAAGGTaGTACTTCCCCCAGGACCCACAAATAGCCTTAGTCCTTCTTCTT +
Preference number: 6 (lower is better)
Translates to: KLQTPPYLEDDDCQR*YFPQDPQIALVLLL
Trigger: AAGAAGAAGGACTAAGGCTATTTGTGGGTCCTGGGGGAAGTACAACCTTTGGCAGTCATCATCTTCCAAATAGGGTGGGGTCTGGAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370035.8
ENST00000483371.1
CDS CAA 90 bp AGGGAGCTTCCAGGGCACTATTTGGAAGATGATGACTGCCAAAGGTaGTACTTCCCCCAGGACCCACAAATAGCCTTAGTCCTTCTTCTT +
Preference number: 6 (lower is better)
Translates to: RELPGHYLEDDDCQR*YFPQDPQIALVLLL
Trigger: AAGAAGAAGGACTAAGGCTATTTGTGGGTCCTGGGGGAAGTACAACCTTTGGCAGTCATCATCTTCCAAATAGTGCCCTGGAAGCTCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405454.1
CDS CAA 90 bp AATGTGGATCTCAAGGTGTGGTCAGGGACTAGCAGCATCAGCGTCTaGTGGGAATGCCTTAGTGATACAAAACTTCAGGCTCTAACCCAG +
Preference number: 6 (lower is better)
Translates to: NVDLKVWSGTSSISV*WECLSDTKLQALTQ
Trigger: CTGGGTTAGAGCCTGAAGTTTTGTATCACTAAGGCATTCCCACAAGACGCTGATGCTGCTAGTCCCTGACCACACCTTGAGATCCACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483371.1
CDS TCA 72 bp TCTGCATCCACCCTGGTGTCATCAACTCGCTTCAGCTaGGATTCTACAGAATCTTGTTTCACTGGGCATCTG +
Preference number: 6 (lower is better)
Translates to: SASTLVSSTRFS*DSTESCFTGHL
Trigger: CAGATGCCCAGTGAAACAAGATTCTGTAGAATCTCAGCTGAAGCGAGTTGATGACACCAGGGTGGATGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370035.8
ENST00000405454.1
ENST00000483371.1
CDS GCA 72 bp CCCCACCATGCTTTTACTTCTGGAGCAGATTCTGACTaGTGCCAGAAGTGTGTCTGGAAATGTGGATCTCAA +
Preference number: 6 (lower is better)
Translates to: PHHAFTSGADSD*CQKCVWKCGSQ
Trigger: TTGAGATCCACATTTCCAGACACACTTCTGGCAGCAGTCAGAATCTGCTCCAGAAGTAAAAGCATGGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483371.1
CDS CCA 72 bp AAGGTGTGGTCAGGGACTAGCAGCATCAGCGTCTTGTaGGAATGCCTTAGTGATACAAAACTTCAGGCTCTA +
Preference number: 6 (lower is better)
Translates to: KVWSGTSSISVL*ECLSDTKLQAL
Trigger: TAGAGCCTGAAGTTTTGTATCACTAAGGCATTCCCACAAGACGCTGATGCTGCTAGTCCCTGACCACACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483371.1
CDS CAA 90 bp AAGGCACCGGGAAGAGCATGCCTTCTTTGTAGGGAAGCAGATCGTTaGGTAAAGTTGGCATATAGGGTAGTGGAGTATAATAACCGAGGG +
Preference number: 6 (lower is better)
Translates to: KAPGRACLLCREADR*VKLAYRVVEYNNRG
Trigger: CCCTCGGTTATTATACTCCACTACCCTATATGCCAACTTTACCAAACGATCTGCTTCCCTACAAAGAAGGCATGCTCTTCCCGGTGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483371.1
CDS CAA 90 bp GGAAGAGCATGCCTTCTTTGTAGGGAAGCAGATCGTTTGGTAAAGTaGGCATATAGGGTAGTGGAGTATAATAACCGAGGGAAAAGGGGC +
Preference number: 6 (lower is better)
Translates to: GRACLLCREADRLVK*AYRVVEYNNRGKRG
Trigger: GCCCCTTTTCCCTCGGTTATTATACTCCACTACCCTATATGCCAACTTTACCAAACGATCTGCTTCCCTACAAAGAAGGCATGCTCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483371.1
CDS GCA 72 bp CACATGGCTCTAGAATACTTTCAACTCCTGTTGATGTaGTTCCCACTGAGGTATTTCTCCTGTGGCAGAGCT +
Preference number: 6 (lower is better)
Translates to: HMALEYFQLLLM*FPLRYFSCGRA
Trigger: AGCTCTGCCACAGGAGAAATACCTCAGTGGGAAGCACATCAACAGGAGTTGAAAGTATTCTAGAGCCATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370035.8
ENST00000405454.1
ENST00000483371.1
CDS CAA 90 bp TCTGCTCAATTTCATCACATGGCTCTAGAATACTTTCAACTCCTGTaGATGTGCTTCCCACTGAGGTATTTCTCCTGTGGCAGAGCTCAG +
Preference number: 6 (lower is better)
Translates to: SAQFHHMALEYFQLL*MCFPLRYFSCGRAQ
Trigger: CTGAGCTCTGCCACAGGAGAAATACCTCAGTGGGAAGCACATCAACAGGAGTTGAAAGTATTCTAGAGCCATGTGATGAAATTGAGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370035.8
ENST00000405454.1
ENST00000483371.1
CDS TCA 72 bp GCCTGTGGCAGCACTTGCACTCATTTTGCACATAAATaGGAACTTCTTTCTCCAGCGAACACAGTTTGCTTG +
Preference number: 6 (lower is better)
Translates to: ACGSTCTHFAHK*ELLSPANTVCL
Trigger: CAAGCAAACTGTGTTCGCTGGAGAAAGAAGTTCTCATTTATGTGCAAAATGAGTGCAAGTGCTGCCACAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370035.8
ENST00000405454.1
CDS CCA 72 bp ATCGTTCCCCCACACCACAGCAGTTTCAAGTCCCTTTaGAACAATAAGGAATTCAACTTCACTGTTAGCCTC +
Preference number: 6 (lower is better)
Translates to: IVPPHHSSFKSL*NNKEFNFTVSL
Trigger: GAGGCTAACAGTGAAGTTGAATTCCTTATTGTTCCAAAGGGACTTGAAACTGCTGTGGTGTGGGGGAACGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483371.1
CDS CAA 72 bp GGATCTAGGATGCCTGTGGCAGCACTTGCACTCATTTaGCACATAAATGAGAACTTCTTTCTCCAGCGAACA +
Preference number: 6 (lower is better)
Translates to: GSRMPVAALALI*HINENFFLQRT
Trigger: TGTTCGCTGGAGAAAGAAGTTCTCATTTATGTGCAAAATGAGTGCAAGTGCTGCCACAGGCATCCTAGATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370035.8
ENST00000405454.1
CDS CAA 72 bp TGCCTTCTTTGTAGGGAAGCAGATCGTTTGGTAAAGTaGGCATATAGGGTAGTGGAGTATAATAACCGAGGG +
Preference number: 6 (lower is better)
Translates to: CLLCREADRLVK*AYRVVEYNNRG
Trigger: CCCTCGGTTATTATACTCCACTACCCTATATGCCAACTTTACCAAACGATCTGCTTCCCTACAAAGAAGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483371.1
CDS CAA 72 bp TCATATCGAGTTATGCAGCGCTCTTTACTTCTGGGTTaGGCCCAGATCTTAAGTCATCCACATATCTTCTGG +
Preference number: 6 (lower is better)
Translates to: SYRVMQRSLLLG*AQILSHPHIFW
Trigger: CCAGAAGATATGTGGATGACTTAAGATCTGGGCCAAACCCAGAAGTAAAGAGCGCTGCATAACTCGATATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483371.1
CDS TCA 72 bp CAAAGATTCAGATTCACCAGCAATTGGTATAGACATTaGAGTGGAGGGAGGCGTTTTAAAACATGGGTCACC +
Preference number: 6 (lower is better)
Translates to: QRFRFTSNWYRH*SGGRRFKTWVT
Trigger: GGTGACCCATGTTTTAAAACGCCTCCCTCCACTTCAATGTCTATACCAATTGCTGGTGAATCTGAATCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370035.8
ENST00000405454.1
CDS TCA 72 bp CTTGGATATAATACTCATATCAAACACTCTGCAATCTaGCATCGTTCCCCCACACCACAGCAGTTTCAAGTC +
Preference number: 6 (lower is better)
Translates to: LGYNTHIKHSAI*HRSPTPQQFQV
Trigger: GACTTGAAACTGCTGTGGTGTGGGGGAACGATGTCAGATTGCAGAGTGTTTGATATGAGTATTATATCCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483371.1
CDS CAA 90 bp ATGACCGGGAGTGACACGTGCTATACCCTGTCAGAGAAAATCACCTaGGATATAATACTCATATCAAACACTCTGCAATCTGACATCGTT +
Preference number: 6 (lower is better)
Translates to: MTGSDTCYTLSEKIT*DIILISNTLQSDIV
Trigger: AACGATGTCAGATTGCAGAGTGTTTGATATGAGTATTATATCCAAGGTGATTTTCTCTGACAGGGTATAGCACGTGTCACTCCCGGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483371.1
CDS GCA 72 bp AAATCTGAACTCAAAAAGTTGGTTCATATCGAGTTATaGAGCGCTCTTTACTTCTGGGTTTGGCCCAGATCT +
Preference number: 6 (lower is better)
Translates to: KSELKKLVHIEL*SALYFWVWPRS
Trigger: AGATCTGGGCCAAACCCAGAAGTAAAGAGCGCTGCATAACTCGATATGAACCAACTTTTTGAGTTCAGATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483371.1
CDS GCA 72 bp ATTACATATTTTCAGAACCAGGCTTCTTCCAGAGAATaGAGAACTGTGACCATTTTCCCTAGGGCACAATCA +
Preference number: 6 (lower is better)
Translates to: ITYFQNQASSRE*RTVTIFPRAQS
Trigger: TGATTGTGCCCTAGGGAAAATGGTCACAGTTCTGCATTCTCTGGAAGAAGCCTGGTTCTGAAAATATGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483371.1
CDS CAA 90 bp AAACCAGTAAGCCACACATCCATACCTGCTATTCCAAGATGCACTTaGAGAGTCTCTCCACCTTTTCTATCTTCTTGCAAAGATTCAGAT +
Preference number: 6 (lower is better)
Translates to: KPVSHTSIPAIPRCT*RVSPPFLSSCKDSD
Trigger: ATCTGAATCTTTGCAAGAAGATAGAAAAGGTGGAGAGACTCTCAAAGTGCATCTTGGAATAGCAGGTATGGATGTGTGGCTTACTGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483371.1
CDS CAA 90 bp TCTAGAAGTTTGGCTATAAGAAGTGTGTGGTACATATATCATCTCTaGCTGATCTTTCTCTCTCTCTCTCCACACACACACACACACACA +
Preference number: 6 (lower is better)
Translates to: SRSLAIRSVWYIYHL*LIFLSLSPHTHTHT
Trigger: TGTGTGTGTGTGTGTGTGTGGAGAGAGAGAGAGAAAGATCAGCAAGAGATGATATATGTACCACACACTTCTTATAGCCAAACTTCTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483371.1
CDS CAA 90 bp AAAGTTGGTTCATATCGAGTTATGCAGCGCTCTTTACTTCTGGGTTaGGCCCAGATCTTAAGTCATCCACATATCTTCTGGTTTTCAAAA +
Preference number: 6 (lower is better)
Translates to: KVGSYRVMQRSLLLG*AQILSHPHIFWFSK
Trigger: TTTTGAAAACCAGAAGATATGTGGATGACTTAAGATCTGGGCCAAACCCAGAAGTAAAGAGCGCTGCATAACTCGATATGAACCAACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483371.1
CDS TCA 72 bp CCTTCTTCTTCCGCACTGGAATCTAGGCTGAAGTCTTaGCTTTGTAATATTTTCTCTACAATGTCATCTGCA +
Preference number: 6 (lower is better)
Translates to: PSSSALESRLKS*LCNIFSTMSSA
Trigger: TGCAGATGACATTGTAGAGAAAATATTACAAAGTCAAGACTTCAGCCTAGATTCCAGTGCGGAAGAAGAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370035.8
ENST00000405454.1
ENST00000483371.1
CDS TCA 72 bp GCCTTAGTCCTTCTTCTTCCGCACTGGAATCTAGGCTaGAGTCTTGACTTTGTAATATTTTCTCTACAATGT +
Preference number: 6 (lower is better)
Translates to: ALVLLLPHWNLG*SLDFVIFSLQC
Trigger: ACATTGTAGAGAAAATATTACAAAGTCAAGACTTCAGCCTAGATTCCAGTGCGGAAGAAGAAGGACTAAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370035.8
ENST00000405454.1
ENST00000483371.1
CDS CAA 90 bp TACTCTATTACTTTAATGTTAGTGTTGTTAGTGCTAGGCTATAATTaGGGCAATGTCTGTGGCTTAAATCAACACAGCATGGGACGTAGC +
Preference number: 6 (lower is better)
Translates to: YSITLMLVLLVLGYN*GNVCGLNQHSMGRS
Trigger: GCTACGTCCCATGCTGTGTTGATTTAAGCCACAGACATTGCCCAAATTATAGCCTAGCACTAACAACACTAACATTAAAGTAATAGAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483371.1
CDS TCA 72 bp AAGAGAAACAGATGGATTTCAGTGTTACATTTGGTATaGAGTGGACCTTTCCCCAAAGCATTTGATCACATG +
Preference number: 6 (lower is better)
Translates to: KRNRWISVLHLV*SGPFPKAFDHM
Trigger: CATGTGATCAAATGCTTTGGGGAAAGGTCCACTTCATACCAAATGTAACACTGAAATCCATCTGTTTCTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483371.1
CDS CAA 72 bp ATGCACTTTGAGAGTCTCTCCACCTTTTCTATCTTCTaGCAAAGATTCAGATTCACCAGCAATTGGTATAGA +
Preference number: 6 (lower is better)
Translates to: MHFESLSTFSIF*QRFRFTSNWYR
Trigger: TCTATACCAATTGCTGGTGAATCTGAATCTTTGCAAGAAGATAGAAAAGGTGGAGAGACTCTCAAAGTGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370035.8
ENST00000405454.1
CDS CAA 72 bp CTGAAGCTGTATCTTCTTTATCAGCTGTATCAAGATTaGGCTCAGCGATTTTCTGCTCAATTTCATCACATG +
Preference number: 6 (lower is better)
Translates to: LKLYLLYQLYQD*AQRFSAQFHHM
Trigger: CATGTGATGAAATTGAGCAGAAAATCGCTGAGCCAAATCTTGATACAGCTGATAAAGAAGATACAGCTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370035.8
ENST00000405454.1
ENST00000483371.1
CDS CAA 72 bp AGTGACACGTGCTATACCCTGTCAGAGAAAATCACCTaGGATATAATACTCATATCAAACACTCTGCAATCT +
Preference number: 6 (lower is better)
Translates to: SDTCYTLSEKIT*DIILISNTLQS
Trigger: AGATTGCAGAGTGTTTGATATGAGTATTATATCCAAGGTGATTTTCTCTGACAGGGTATAGCACGTGTCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483371.1
CDS TCA 72 bp AGAATCTTGTTTCACTGGGCATCTGCTGAGTTTTTCTaGAGCTGTATCTTCTTTATCAGCTGTATCAAGATT +
Preference number: 6 (lower is better)
Translates to: RILFHWASAEFF*SCIFFISCIKI
Trigger: AATCTTGATACAGCTGATAAAGAAGATACAGCTTCAGAAAAACTCAGCAGATGCCCAGTGAAACAAGATTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370035.8
ENST00000405454.1
ENST00000483371.1
CDS CAA 72 bp ACTTTAATGTTAGTGTTGTTAGTGCTAGGCTATAATTaGGGCAATGTCTGTGGCTTAAATCAACACAGCATG +
Preference number: 6 (lower is better)
Translates to: TLMLVLLVLGYN*GNVCGLNQHSM
Trigger: CATGCTGTGTTGATTTAAGCCACAGACATTGCCCAAATTATAGCCTAGCACTAACAACACTAACATTAAAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483371.1
CDS CAA 90 bp TCACAACAGCAAGCTAAAGAGTACTCTATTACTTTAATGTTAGTGTaGTTAGTGCTAGGCTATAATTTGGGCAATGTCTGTGGCTTAAAT +
Preference number: 6 (lower is better)
Translates to: SQQQAKEYSITLMLV*LVLGYNLGNVCGLN
Trigger: ATTTAAGCCACAGACATTGCCCAAATTATAGCCTAGCACTAACAACACTAACATTAAAGTAATAGAGTACTCTTTAGCTTGCTGTTGTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483371.1
CDS CAA 72 bp TACATTTGGTATGAAGTGGACCTTTCCCCAAAGCATTaGATCACATGTACATCACAGAATCACATTTACATT +
Preference number: 6 (lower is better)
Translates to: YIWYEVDLSPKH*ITCTSQNHIYI
Trigger: AATGTAAATGTGATTCTGTGATGTACATGTGATCAAATGCTTTGGGGAAAGGTCCACTTCATACCAAATGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483371.1
CDS CAA 72 bp CAAGCTAAAGAGTACTCTATTACTTTAATGTTAGTGTaGTTAGTGCTAGGCTATAATTTGGGCAATGTCTGT +
Preference number: 6 (lower is better)
Translates to: QAKEYSITLMLV*LVLGYNLGNVC
Trigger: ACAGACATTGCCCAAATTATAGCCTAGCACTAACAACACTAACATTAAAGTAATAGAGTACTCTTTAGCTTG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483371.1