RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM102A (Homo sapiens)

Ensembl gene IDs: ENSG00000167106

Ensembl transcript IDs: ENST00000300434.3, ENST00000373084.8, ENST00000373095.6, ENST00000465821.5, ENST00000479828.1, ENST00000493175.1, ENST00000494606.1

Found 470 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCAGCACCCGTTCCCGCCGGGCTGCTGGACCCTGGGCCTCTGACTaGACAGCAGGCAGTGACCAGGAGTCCTTGGGAAGGAGCTCAGGG +
Preference number: 1 (lower is better)
Translates to: GSTRSRRAAGPWASD*TAGSDQESLGRSSG
Trigger: CCCTGAGCTCCTTCCCAAGGACTCCTGGTCACTGCCTGCTGTGCAGTCAGAGGCCCAGGGTCCAGCAGCCCGGCGGGAACGGGTGCTGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR CCA 90 bp GGAAGCCAGCTCCGGACCAGTCCAGCCACAGCCCACCTGCCTCTCTaGCATCCGCCCCAGTCTGGGCAGCTGACCCTGAGGGCAGAGAAG +
Preference number: 1 (lower is better)
Translates to: GSQLRTSPATAHLPL*HPPQSGQLTLRAEK
Trigger: CTTCTCTGCCCTCAGGGTCAGCTGCCCAGACTGGGGCGGATGCCAGAGAGGCAGGTGGGCTGTGGCTGGACTGGTCCGGAGCTGGCTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR CCA 90 bp GGCCTTGGTGGGCCAGGAGGGTCCCAGCATGGATGGGAGGGGCAATaGAATGATGCTACGGGGAGTGTGGACTGGAGTGCATGGAGGAGG +
Preference number: 1 (lower is better)
Translates to: GLGGPGGSQHGWEGQ*NDATGSVDWSAWRR
Trigger: CCTCCTCCATGCACTCCAGTCCACACTCCCCGTAGCATCATTCCATTGCCCCTCCCATCCATGCTGGGACCCTCCTGGCCCACCAAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR CCA 90 bp CAGTGGTGCCTGGGCCTTGGTGGGCCAGGAGGGTCCCAGCATGGATaGGAGGGGCAATGGAATGATGCTACGGGGAGTGTGGACTGGAGT +
Preference number: 1 (lower is better)
Translates to: QWCLGLGGPGGSQHG*EGQWNDATGSVDWS
Trigger: ACTCCAGTCCACACTCCCCGTAGCATCATTCCATTGCCCCTCCCATCCATGCTGGGACCCTCCTGGCCCACCAAGGCCCAGGCACCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR CCA 90 bp GCTCCAACCTTCCTGCAGGAAAACCAGCTGCTCAGGACCCAGCCCTaGGCAGAGGGCACGGTCGGTGCTCAGACCTTTCTCAGCACGGGT +
Preference number: 1 (lower is better)
Translates to: APTFLQENQLLRTQP*AEGTVGAQTFLSTG
Trigger: ACCCGTGCTGAGAAAGGTCTGAGCACCGACCGTGCCCTCTGCCCAGGGCTGGGTCCTGAGCAGCTGGTTTTCCTGCAGGAAGGTTGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR GCA 90 bp TCCGCCCCAGTCTGGGCAGCTGACCCTGAGGGCAGAGAAGGACTTTaGTTGCTCCAACCTTCCTGCAGGAAAACCAGCTGCTCAGGACCC +
Preference number: 1 (lower is better)
Translates to: SAPVWAADPEGREGL*LLQPSCRKTSCSGP
Trigger: GGGTCCTGAGCAGCTGGTTTTCCTGCAGGAAGGTTGGAGCAAGCAAAGTCCTTCTCTGCCCTCAGGGTCAGCTGCCCAGACTGGGGCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR CCA 90 bp GCATCTCTACATTTAGGAGCCGCTGCATGTCCTCAGCCAGAGGGCTaGGTCAGTCTCCAGCAGCGCCGGTCCTTGCCAGCTCCTTCTTGC +
Preference number: 1 (lower is better)
Translates to: ASLHLGAAACPQPEG*VSLQQRRSLPAPSC
Trigger: GCAAGAAGGAGCTGGCAAGGACCGGCGCTGCTGGAGACTGACCCAGCCCTCTGGCTGAGGACATGCAGCGGCTCCTAAATGTAGAGATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR TCA 90 bp GAAGAGGCCGCCAGCAGGTCCCCCAGGACACAAGGAAGGGACAGCTaGAGCACTAAGCAGTCAGACAGTCACAGGTGGCAGGATTCCGGA +
Preference number: 1 (lower is better)
Translates to: EEAASRSPRTQGRDS*STKQSDSHRWQDSG
Trigger: TCCGGAATCCTGCCACCTGTGACTGTCTGACTGCTTAGTGCTTCAGCTGTCCCTTCCTTGTGTCCTGGGGGACCTGCTGGCGGCCTCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR GCA 90 bp AGAGAAGGACTTTGCTTGCTCCAACCTTCCTGCAGGAAAACCAGCTaGTCAGGACCCAGCCCTGGGCAGAGGGCACGGTCGGTGCTCAGA +
Preference number: 1 (lower is better)
Translates to: REGLCLLQPSCRKTS*SGPSPGQRARSVLR
Trigger: TCTGAGCACCGACCGTGCCCTCTGCCCAGGGCTGGGTCCTGAGCAGCTGGTTTTCCTGCAGGAAGGTTGGAGCAAGCAAAGTCCTTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR CCA 90 bp CCCAGCATGGATGGGAGGGGCAATGGAATGATGCTACGGGGAGTGTaGACTGGAGTGCATGGAGGAGGCATGGATGAGATGTGGCGCAGA +
Preference number: 1 (lower is better)
Translates to: PSMDGRGNGMMLRGV*TGVHGGGMDEMWRR
Trigger: TCTGCGCCACATCTCATCCATGCCTCCTCCATGCACTCCAGTCCACACTCCCCGTAGCATCATTCCATTGCCCCTCCCATCCATGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR CCA 90 bp GCCAGGCTTTCTGGCCTCTGGTTCCAGCCAGCATCAATTTGGTTGTaGCCAAATTCTCAGTCCAATCACCCTGGCCCAGGGCCTGGCGTG +
Preference number: 1 (lower is better)
Translates to: ARLSGLWFQPASIWL*PNSQSNHPGPGPGV
Trigger: CACGCCAGGCCCTGGGCCAGGGTGATTGGACTGAGAATTTGGCCACAACCAAATTGATGCTGGCTGGAACCAGAGGCCAGAAAGCCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR CCA 90 bp CTGGACACTGTGCGGTCAGCTTCCTTTTTAAAGTGCCAGTATCGGTaGGGCAGGAAGGGACTCTCAGGGCTGAGCAGAGCCTTCTCCAGC +
Preference number: 1 (lower is better)
Translates to: LDTVRSASFLKCQYR*GRKGLSGLSRAFSS
Trigger: GCTGGAGAAGGCTCTGCTCAGCCCTGAGAGTCCCTTCCTGCCCCACCGATACTGGCACTTTAAAAAGGAAGCTGACCGCACAGTGTCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR CCA 90 bp GACAAGGCCAGGCTTTCTGGCCTCTGGTTCCAGCCAGCATCAATTTaGTTGTGGCCAAATTCTCAGTCCAATCACCCTGGCCCAGGGCCT +
Preference number: 1 (lower is better)
Translates to: DKARLSGLWFQPASI*LWPNSQSNHPGPGP
Trigger: AGGCCCTGGGCCAGGGTGATTGGACTGAGAATTTGGCCACAACCAAATTGATGCTGGCTGGAACCAGAGGCCAGAAAGCCTGGCCTTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR CCA 90 bp AGGACAGGGCTCCCACATGGGGACAAGGCCAGGCTTTCTGGCCTCTaGTTCCAGCCAGCATCAATTTGGTTGTGGCCAAATTCTCAGTCC +
Preference number: 1 (lower is better)
Translates to: RTGLPHGDKARLSGL*FQPASIWLWPNSQS
Trigger: GGACTGAGAATTTGGCCACAACCAAATTGATGCTGGCTGGAACCAGAGGCCAGAAAGCCTGGCCTTGTCCCCATGTGGGAGCCCTGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR CCA 90 bp TTGAATGAGAGGCAAATCTACCCTGAATGCACCTCCCTCCTAGGCTaGGTGAGGTCACGCAGACACAGAAGGGCAGGACAGAACTCCCCA +
Preference number: 1 (lower is better)
Translates to: LNERQIYPECTSLLG*VRSRRHRRAGQNSP
Trigger: TGGGGAGTTCTGTCCTGCCCTTCTGTGTCTGCGTGACCTCACCCAGCCTAGGAGGGAGGTGCATTCAGGGTAGATTTGCCTCTCATTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR CCA 90 bp CGGGGAGTGTGGACTGGAGTGCATGGAGGAGGCATGGATGAGATGTaGCGCAGAGGTGATCTGAAGGGGAAAGTTCCTCATGGAATGATA +
Preference number: 1 (lower is better)
Translates to: RGVWTGVHGGGMDEM*RRGDLKGKVPHGMI
Trigger: TATCATTCCATGAGGAACTTTCCCCTTCAGATCACCTCTGCGCCACATCTCATCCATGCCTCCTCCATGCACTCCAGTCCACACTCCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR CCA 90 bp AGAGGTGATCTGAAGGGGAAAGTTCCTCATGGAATGATACAGGTCTaGACTCCAGAGAAAGCAGGACTCTTCTCCAGCCCGGACACCTGC +
Preference number: 1 (lower is better)
Translates to: RGDLKGKVPHGMIQV*TPEKAGLFSSPDTC
Trigger: GCAGGTGTCCGGGCTGGAGAAGAGTCCTGCTTTCTCTGGAGTCCAGACCTGTATCATTCCATGAGGAACTTTCCCCTTCAGATCACCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR CCA 90 bp ACTCTCCAACTCTCTCAATATATAGAATTTGAAGTCCAGGAGCTGTaGGCACCTGGTGGGAATTCACTGAGCTCAAGGGGACAAGAGGGC +
Preference number: 1 (lower is better)
Translates to: TLQLSQYIEFEVQEL*APGGNSLSSRGQEG
Trigger: GCCCTCTTGTCCCCTTGAGCTCAGTGAATTCCCACCAGGTGCCCACAGCTCCTGGACTTCAAATTCTATATATTGAGAGAGTTGGAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR CCA 90 bp ACTAGCCTGAGTTCCCCTAACAATGTTATTTTCTACAACAGAAGCTaGGACAGAGGAACAAACACAGCCCACTCAAGCAGTGGTGGCAAC +
Preference number: 1 (lower is better)
Translates to: TSLSSPNNVIFYNRS*DRGTNTAHSSSGGN
Trigger: GTTGCCACCACTGCTTGAGTGGGCTGTGTTTGTTCCTCTGTCCCAGCTTCTGTTGTAGAAAATAACATTGTTAGGGGAACTCAGGCTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373095.6
3UTR CAA 90 bp GGGCTGGGTCAGTCTCCAGCAGCGCCGGTCCTTGCCAGCTCCTTCTaGCCCACAAGCTGCACGGGCCCGCCTGGCCTGCCTGGCCTGCCC +
Preference number: 2 (lower is better)
Translates to: GLGQSPAAPVLASSF*PTSCTGPPGLPGLP
Trigger: GGGCAGGCCAGGCAGGCCAGGCGGGCCCGTGCAGCTTGTGGGCAAGAAGGAGCTGGCAAGGACCGGCGCTGCTGGAGACTGACCCAGCCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR CAA 90 bp TGTCCTCAGCCAGAGGGCTGGGTCAGTCTCCAGCAGCGCCGGTCCTaGCCAGCTCCTTCTTGCCCACAAGCTGCACGGGCCCGCCTGGCC +
Preference number: 2 (lower is better)
Translates to: CPQPEGWVSLQQRRS*PAPSCPQAARARLA
Trigger: GGCCAGGCGGGCCCGTGCAGCTTGTGGGCAAGAAGGAGCTGGCAAGGACCGGCGCTGCTGGAGACTGACCCAGCCCTCTGGCTGAGGACA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR GCA 90 bp TCTGGAGGAGTCTCCCCAACAGCGCCAAAGCTGGCTGTTTTCCACCCAAAGCCCGCTGGGCCCCAGCGCTaGTGGAACCAGCCGGCAGGT +
Preference number: 2 (lower is better)
Translates to: SGGVSPTAPKLAVFHPKPAGPQR*WNQPAG
Trigger: ACCTGCCGGCTGGTTCCAGCAGCGCTGGGGCCCAGC...GGGCTTTGGGTGGAAAACAGCCAGCTTTGGCGCTGTTGGGGAGACTCCTCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR TCA 90 bp TGCAGGAAAACCAGCTGCTCAGGACCCAGCCCTGGGCAGAGGGCACGGTCGGTGCCTGCTGCTAAGACGTaGCCAAAGCCAGTGCTCCTG +
Preference number: 2 (lower is better)
Translates to: CRKTSCSGPSPGQRARSVPAAKT*PKPVLL
Trigger: CAGGAGCACTGGCTTTGGTCACGTCTTAGCAGCAGG...CACCGACCGTGCCCTCTGCCCAGGGCTGGGTCCTGAGCAGCTGGTTTTCCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR TCA 90 bp AGGGCTCCCACATGGGGACAAGGCCAGGCTTTCTGGCCTCTGGTTCCAGCCAGCCACGGGTCTCAGACCTaGGCTGGAGCTAACTGGAGG +
Preference number: 2 (lower is better)
Translates to: RAPTWGQGQAFWPLVPASHGSQT*AGANWR
Trigger: CCTCCAGTTAGCTCCAGCTCAGGTCTGAGACCCGTG...GCTGGCTGGAACCAGAGGCCAGAAAGCCTGGCCTTGTCCCCATGTGGGAGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR GCA 90 bp GCCAGGGAGTTCCAAGACCAAGAAGCCCAACTCTCACCAGCGGGGGCAGATGGGCCCTGGGCCTCTGACTaGACAGCAGGCAGTGACCAG +
Preference number: 2 (lower is better)
Translates to: AREFQDQEAQLSPAGADGPWASD*TAGSDQ
Trigger: CTGGTCACTGCCTGCTGTGCAGTCAGAGGCCCAGGG...CCCATCTGCCCCCGCTGGTGAGAGTTGGGCTTCTTGGTCTTGGAACTCCCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR CCA 90 bp ACCAAAGCCAGTGCTCCTGGAGTGAGTGGGGACACAGGTAGAGAGGCCCCCTCACCTCAGCCAGAGGGCTaGGTCAGTCTCCAGCAGCGC +
Preference number: 2 (lower is better)
Translates to: TKASAPGVSGDTGREAPSPQPEG*VSLQQR
Trigger: GCGCTGCTGGAGACTGACCCAGCCCTCTGGCTGAGG...TGAGGGGGCCTCTCTACCTGTGTCCCCACTCACTCCAGGAGCACTGGCTTTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR GCA 90 bp CCCACATGGGGACAAGGCCAGGCTTTCTGGCCTCTGGTTCCAGCCAGCATCAATGGGGCAGGGCCAGACTaGTCCCCACTGGGAAAGCAC +
Preference number: 2 (lower is better)
Translates to: PTWGQGQAFWPLVPASINGAGPD*SPLGKH
Trigger: GTGCTTTCCCAGTGGGGAGCAGTCTGGCCCTGCCCC...ATTGATGCTGGCTGGAACCAGAGGCCAGAAAGCCTGGCCTTGTCCCCATGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR CCA 90 bp CCCACTGGGAAAGCACACCCCTTAAAGGAGCCCTTCCCCCTTGCCCAGAACGGGATTCACAGTGGTGCCTaGGCCTTGGTGGGCCAGGAG +
Preference number: 2 (lower is better)
Translates to: PTGKAHPLKEPFPLAQNGIHSGA*ALVGQE
Trigger: CTCCTGGCCCACCAAGGCCCAGGCACCACTGTGAAT...CCCGTTCTGGGCAAGGGGGAAGGGCTCCTTTAAGGGGTGTGCTTTCCCAGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR CCA 90 bp AGGGCTCCCACATGGGGACAAGGCCAGGCTTTCTGGCCTCTGGTTCCAGCCAGCTGGCGTGGGAGGATGTaGCAGGCTCTGTCTCCTTCT +
Preference number: 2 (lower is better)
Translates to: RAPTWGQGQAFWPLVPASWRGRM*QALSPS
Trigger: AGAAGGAGACAGAGCCTGCCACATCCTCCCACGCCA...GCTGGCTGGAACCAGAGGCCAGAAAGCCTGGCCTTGTCCCCATGTGGGAGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR TCA 90 bp AGGGCTCCCACATGGGGACAAGGCCAGGCTTTCTGGCCTCTGGTTCCAGCCAGCGGCGCAGAGGTGATCTaGAGGGGAAAGTTCCTCATG +
Preference number: 2 (lower is better)
Translates to: RAPTWGQGQAFWPLVPASGAEVI*RGKFLM
Trigger: CATGAGGAACTTTCCCCTTCAGATCACCTCTGCGCC...GCTGGCTGGAACCAGAGGCCAGAAAGCCTGGCCTTGTCCCCATGTGGGAGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR GCA 90 bp TGGGAATTCACTGAGCTCAAGGGGACAAGAGGGCTGAGGACAGGGCTCCCACATTTCTTGCCCACAAGCTaGACGGGCCCGCCTGGCCTG +
Preference number: 2 (lower is better)
Translates to: WEFTELKGTRGLRTGLPHFLPTS*TGPPGL
Trigger: CAGGCCAGGCGGGCCCGTGCAGCTTGTGGGCAAGAA...ATGTGGGAGCCCTGTCCTCAGCCCTCTTGTCCCCTTGAGCTCAGTGAATTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR GCA 90 bp GGGACTGGCTGGCAGCCAGAACCCACCTTCAAGCAAGTTACAAGGACTTGGGGGAGCAGCGCCGGTCCTTaGCAGCTCCTTCTTGCCCAC +
Preference number: 2 (lower is better)
Translates to: GTGWQPEPTFKQVTRTWGSSAGP*QLLLAH
Trigger: GTGGGCAAGAAGGAGCTGGCAAGGACCGGCGCTGCT...CCCCCAAGTCCTTGTAACTTGCTTGAAGGTGGGTTCTGGCTGCCAGCCAGTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR GCA 90 bp GCCAGGGAGTTCCAAGACCAAGAAGCCCAACTCTCACCAGCGGGGGCAGATGGGAGAGGGCACGGTCGGTaGTCAGACCTTTCTCAGCAC +
Preference number: 2 (lower is better)
Translates to: AREFQDQEAQLSPAGADGRGHGR*SDLSQH
Trigger: GTGCTGAGAAAGGTCTGAGCACCGACCGTGCCCTCT...CCCATCTGCCCCCGCTGGTGAGAGTTGGGCTTCTTGGTCTTGGAACTCCCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR GCA 90 bp GGGACTGGCTGGCAGCCAGAACCCACCTTCAAGCAAGTTACAAGGACTTGGGGGGGAGCCCTTCCCCCTTaGCCAGAACGGGGGATGCTT +
Preference number: 2 (lower is better)
Translates to: GTGWQPEPTFKQVTRTWGGALPP*PERGML
Trigger: AAGCATCCCCCGTTCTGGGCAAGGGGGAAGGGCTCC...CCCCCAAGTCCTTGTAACTTGCTTGAAGGTGGGTTCTGGCTGCCAGCCAGTCCC
61% GC, longest homopolymer 7 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR CCA 90 bp GGGGGTGAGCATGTGCAAAGTGCAGGCTGCAAGGCAGCGGGAGGACATTTGCCGCAAAGCCAGTGCTCCTaGAGTGAGTGGGGACACAGG +
Preference number: 2 (lower is better)
Translates to: GGEHVQSAGCKAAGGHLPQSQCS*SEWGHR
Trigger: CCTGTGTCCCCACTCACTCCAGGAGCACTGGCTTTG...CGGCAAATGTCCTCCCGCTGCCTTGCAGCCTGCACTTTGCACATGCTCACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR CCA 90 bp CCCACTGGGAAAGCACACCCCTTAAAGGAGCCCTTCCCCCTTGCCCAGAACGGGCAAAGCCAGTGCTCCTaGAGTGAGTGGGGACACAGG +
Preference number: 2 (lower is better)
Translates to: PTGKAHPLKEPFPLAQNGQSQCS*SEWGHR
Trigger: CCTGTGTCCCCACTCACTCCAGGAGCACTGGCTTTG...CCCGTTCTGGGCAAGGGGGAAGGGCTCCTTTAAGGGGTGTGCTTTCCCAGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR CCA 90 bp GGATGCTTCCAGAGGAAGGCTGAGGCTTTTCTGGTAAGGAAGCCAGCTCCGGACCGGGCTGCTGGACCCTaGGCCTCTGACTGCACAGCA +
Preference number: 2 (lower is better)
Translates to: GCFQRKAEAFLVRKPAPDRAAGP*ASDCTA
Trigger: TGCTGTGCAGTCAGAGGCCCAGGGTCCAGCAGCCCG...GTCCGGAGCTGGCTTCCTTACCAGAAAAGCCTCAGCCTTCCTCTGGAAGCATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR CCA 90 bp CTCCCCATCTTCTGGGGGCCAATTCGTCTGGACACTGTGCGGTCAGCTTCCTTTCGGGCTGCTGGACCCTaGGCCTCTGACTGCACAGCA +
Preference number: 2 (lower is better)
Translates to: LPIFWGPIRLDTVRSASFRAAGP*ASDCTA
Trigger: TGCTGTGCAGTCAGAGGCCCAGGGTCCAGCAGCCCG...AAAGGAAGCTGACCGCACAGTGTCCAGACGAATTGGCCCCCAGAAGATGGGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR TCA 90 bp GGGACTGGCTGGCAGCCAGAACCCACCTTCAAGCAAGTTACAAGGACTTGGGGGCACGGGTCTCAGACCTaGGCTGGAGCTAACTGGAGG +
Preference number: 2 (lower is better)
Translates to: GTGWQPEPTFKQVTRTWGHGSQT*AGANWR
Trigger: CCTCCAGTTAGCTCCAGCTCAGGTCTGAGACCCGTG...CCCCCAAGTCCTTGTAACTTGCTTGAAGGTGGGTTCTGGCTGCCAGCCAGTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR GCA 90 bp CCCTCAGCCACAGGCATCTCTACATTTAGGAGCCGCTGCATGTCCTCAGCCAGACTGGCCTGCCTGGCCTaGCCTCTAGTGGTTCAGAGG +
Preference number: 2 (lower is better)
Translates to: PSATGISTFRSRCMSSARLACLA*PLVVQR
Trigger: CCTCTGAACCACTAGAGGGCAGGCCAGGCAGGCCAG...TCTGGCTGAGGACATGCAGCGGCTCCTAAATGTAGAGATGCCTGTGGCTGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR GCA 90 bp GCCAGGGAGTTCCAAGACCAAGAAGCCCAACTCTCACCAGCGGGGGCAGATGGGACATTTAGGAGCCGCTaGATGTCCTCAGCCAGAGGG +
Preference number: 2 (lower is better)
Translates to: AREFQDQEAQLSPAGADGTFRSR*MSSARG
Trigger: CCCTCTGGCTGAGGACATGCAGCGGCTCCTAAATGT...CCCATCTGCCCCCGCTGGTGAGAGTTGGGCTTCTTGGTCTTGGAACTCCCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR CCA 90 bp ACCAAAGCCAGTGCTCCTGGAGTGAGTGGGGACACAGGTAGAGAGGCCCCCTCAACGGGGAGTGTGGACTaGAGTGCATGGAGGAGGCAT +
Preference number: 2 (lower is better)
Translates to: TKASAPGVSGDTGREAPSTGSVD*SAWRRH
Trigger: ATGCCTCCTCCATGCACTCCAGTCCACACTCCCCGT...TGAGGGGGCCTCTCTACCTGTGTCCCCACTCACTCCAGGAGCACTGGCTTTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR CCA 90 bp CTGGCTGGCAGCCAGAACCCACCTTCAAGCAAGTTACAAGGACTTGGGGGAAAGCCTCAGCCAGAGGGCTaGGTCAGTCTCCAGCAGCGC +
Preference number: 2 (lower is better)
Translates to: LAGSQNPPSSKLQGLGGKPQPEG*VSLQQR
Trigger: GCGCTGCTGGAGACTGACCCAGCCCTCTGGCTGAGG...CTTTCCCCCAAGTCCTTGTAACTTGCTTGAAGGTGGGTTCTGGCTGCCAGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR CCA 90 bp TGGGAATTCACTGAGCTCAAGGGGACAAGAGGGCTGAGGACAGGGCTCCCACATTGGGGTCTGAGGTCATaGCTCCCAGGAAGAGGCCGC +
Preference number: 2 (lower is better)
Translates to: WEFTELKGTRGLRTGLPHWGLRS*LPGRGR
Trigger: GCGGCCTCTTCCTGGGAGCCATGACCTCAGACCCCA...ATGTGGGAGCCCTGTCCTCAGCCCTCTTGTCCCCTTGAGCTCAGTGAATTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR CCA 90 bp CCCACATGGGGACAAGGCCAGGCTTTCTGGCCTCTGGTTCCAGCCAGCATCAATCTGGGGTTCCTGGTCTaGAGGAGTCTCCCCAACAGC +
Preference number: 2 (lower is better)
Translates to: PTWGQGQAFWPLVPASINLGFLV*RSLPNS
Trigger: GCTGTTGGGGAGACTCCTCCAGACCAGGAACCCCAG...ATTGATGCTGGCTGGAACCAGAGGCCAGAAAGCCTGGCCTTGTCCCCATGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR CCA 90 bp AGGCCAGGCTTTCTGGCCTCTGGTTCCAGCCAGCATCAATTTGGTTGTGGCCAATCAGTCCAATCACCCTaGCCCAGGGCCTGGCGTGGG +
Preference number: 2 (lower is better)
Translates to: RPGFLASGSSQHQFGCGQSVQSP*PRAWRG
Trigger: CCCACGCCAGGCCCTGGGCCAGGGTGATTGGACTGA...TTGGCCACAACCAAATTGATGCTGGCTGGAACCAGAGGCCAGAAAGCCTGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR GCA 90 bp ACCAAAGCCAGTGCTCCTGGAGTGAGTGGGGACACAGGTAGAGAGGCCCCCTCAGAGTGTGGACTGGAGTaGATGGAGGAGGCATGGATG +
Preference number: 2 (lower is better)
Translates to: TKASAPGVSGDTGREAPSECGLE*MEEAWM
Trigger: CATCCATGCCTCCTCCATGCACTCCAGTCCACACTC...TGAGGGGGCCTCTCTACCTGTGTCCCCACTCACTCCAGGAGCACTGGCTTTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR GCA 90 bp CTGGCTGGCAGCCAGAACCCACCTTCAAGCAAGTTACAAGGACTTGGGGGAAAGCCCTGGGCCTCTGACTaGACAGCAGGCAGTGACCAG +
Preference number: 2 (lower is better)
Translates to: LAGSQNPPSSKLQGLGGKPWASD*TAGSDQ
Trigger: CTGGTCACTGCCTGCTGTGCAGTCAGAGGCCCAGGG...CTTTCCCCCAAGTCCTTGTAACTTGCTTGAAGGTGGGTTCTGGCTGCCAGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR GCA 90 bp AGGGCTCCCACATGGGGACAAGGCCAGGCTTTCTGGCCTCTGGTTCCAGCCAGCGCTTCCTTTTTAAAGTaGCAGTATCGGTGGGGCAGG +
Preference number: 2 (lower is better)
Translates to: RAPTWGQGQAFWPLVPASASFLK*QYRWGR
Trigger: CCTGCCCCACCGATACTGGCACTTTAAAAAGGAAGC...GCTGGCTGGAACCAGAGGCCAGAAAGCCTGGCCTTGTCCCCATGTGGGAGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR CCA 90 bp TGGGAATTCACTGAGCTCAAGGGGACAAGAGGGCTGAGGACAGGGCTCCCACATTGTCCAGGGACTGGCTaGCAGCCAGAACCCACCTTC +
Preference number: 2 (lower is better)
Translates to: WEFTELKGTRGLRTGLPHCPGTG*QPEPTF
Trigger: GAAGGTGGGTTCTGGCTGCCAGCCAGTCCCTGGACA...ATGTGGGAGCCCTGTCCTCAGCCCTCTTGTCCCCTTGAGCTCAGTGAATTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR CCA 90 bp TGGGAATTCACTGAGCTCAAGGGGACAAGAGGGCTGAGGACAGGGCTCCCACATGAACCAGCCGGCAGGTaGGGCAGAAAAGCAGCACCT +
Preference number: 2 (lower is better)
Translates to: WEFTELKGTRGLRTGLPHEPAGR*GRKAAP
Trigger: AGGTGCTGCTTTTCTGCCCCACCTGCCGGCTGGTTC...ATGTGGGAGCCCTGTCCTCAGCCCTCTTGTCCCCTTGAGCTCAGTGAATTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR CAA 90 bp GACTGGCTGGCAGCCAGAACCCACCTTCAAGCAAGTTACAAGGACTaGGGGGAAAGTGCTGAGAGCAGAGGCTTTAGTAGGGGGCAGGGC +
Preference number: 2 (lower is better)
Translates to: DWLAARTHLQASYKD*GESAESRGFSRGQG
Trigger: GCCCTGCCCCCTACTAAAGCCTCTGCTCTCAGCACTTTCCCCCAAGTCCTTGTAACTTGCTTGAAGGTGGGTTCTGGCTGCCAGCCAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR CAA 90 bp AAGGCCAGGCTTTCTGGCCTCTGGTTCCAGCCAGCATCAATTTGGTaGTGGCCAAATTCTCAGTCCAATCACCCTGGCCCAGGGCCTGGC +
Preference number: 2 (lower is better)
Translates to: KARLSGLWFQPASIW*WPNSQSNHPGPGPG
Trigger: GCCAGGCCCTGGGCCAGGGTGATTGGACTGAGAATTTGGCCACAACCAAATTGATGCTGGCTGGAACCAGAGGCCAGAAAGCCTGGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR CAA 90 bp GGACAAGGCCAGGCTTTCTGGCCTCTGGTTCCAGCCAGCATCAATTaGGTTGTGGCCAAATTCTCAGTCCAATCACCCTGGCCCAGGGCC +
Preference number: 2 (lower is better)
Translates to: GQGQAFWPLVPASIN*VVAKFSVQSPWPRA
Trigger: GGCCCTGGGCCAGGGTGATTGGACTGAGAATTTGGCCACAACCAAATTGATGCTGGCTGGAACCAGAGGCCAGAAAGCCTGGCCTTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR TCA 90 bp TGCCTGGCCTGCCCTCTAGTGGTTCAGAGGAGAATATTCACAGTGGTGCCTGGGGGAGGGGCAATGGAATaGTGCTACGGGGAGTGTGGA +
Preference number: 2 (lower is better)
Translates to: CLACPLVVQRRIFTVVPGGGAME*CYGECG
Trigger: TCCACACTCCCCGTAGCATCATTCCATTGCCCCTCC...CCCAGGCACCACTGTGAATATTCTCCTCTGAACCACTAGAGGGCAGGCCAGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR TCA 90 bp AGGGCTCCCACATGGGGACAAGGCCAGGCTTTCTGGCCTCTGGTTCCAGCCAGCGCGAGGAGGCAATATTaGACCGTGAACTCAAGAAGA +
Preference number: 2 (lower is better)
Translates to: RAPTWGQGQAFWPLVPASARRQY*TVNSRR
Trigger: TCTTCTTGAGTTCACGGTTCAATATTGCCTCCTCGC...GCTGGCTGGAACCAGAGGCCAGAAAGCCTGGCCTTGTCCCCATGTGGGAGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR GCA 90 bp AGGAAGGCTGAGGCTTTTCTGGTAAGGAAGCCAGCTCCGGACCAGTCCAGCCACGAATATTCACAGTGGTaGCTGGGCCTTGGTGGGCCA +
Preference number: 2 (lower is better)
Translates to: RKAEAFLVRKPAPDQSSHEYSQW*LGLGGP
Trigger: TGGCCCACCAAGGCCCAGGCACCACTGTGAATATTC...GTGGCTGGACTGGTCCGGAGCTGGCTTCCTTACCAGAAAAGCCTCAGCCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR GCA 90 bp TGGGAATTCACTGAGCTCAAGGGGACAAGAGGGCTGAGGACAGGGCTCCCACATCGTGACCAAAGCCAGTaGTCCTGGAGTGAGTGGGGA +
Preference number: 2 (lower is better)
Translates to: WEFTELKGTRGLRTGLPHRDQSQ*SWSEWG
Trigger: TCCCCACTCACTCCAGGAGCACTGGCTTTGGTCACG...ATGTGGGAGCCCTGTCCTCAGCCCTCTTGTCCCCTTGAGCTCAGTGAATTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR GCA 90 bp CTGGCTGGCAGCCAGAACCCACCTTCAAGCAAGTTACAAGGACTTGGGGGAAAGGCCCAGAACGGGGGATaGTTCCAGAGGAAGGCTGAG +
Preference number: 2 (lower is better)
Translates to: LAGSQNPPSSKLQGLGGKAQNGG*FQRKAE
Trigger: CTCAGCCTTCCTCTGGAAGCATCCCCCGTTCTGGGC...CTTTCCCCCAAGTCCTTGTAACTTGCTTGAAGGTGGGTTCTGGCTGCCAGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR CCA 90 bp AGGAAGGCTGAGGCTTTTCTGGTAAGGAAGCCAGCTCCGGACCAGTCCAGCCACGGATGGGAGGGGCAATaGAATGATGCTACGGGGAGT +
Preference number: 2 (lower is better)
Translates to: RKAEAFLVRKPAPDQSSHGWEGQ*NDATGS
Trigger: ACTCCCCGTAGCATCATTCCATTGCCCCTCCCATCC...GTGGCTGGACTGGTCCGGAGCTGGCTTCCTTACCAGAAAAGCCTCAGCCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR CCA 90 bp CCCACATGGGGACAAGGCCAGGCTTTCTGGCCTCTGGTTCCAGCCAGCATCAATGGATGGGAGGGGCAATaGAATGATGCTACGGGGAGT +
Preference number: 2 (lower is better)
Translates to: PTWGQGQAFWPLVPASINGWEGQ*NDATGS
Trigger: ACTCCCCGTAGCATCATTCCATTGCCCCTCCCATCC...ATTGATGCTGGCTGGAACCAGAGGCCAGAAAGCCTGGCCTTGTCCCCATGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR TCA 90 bp CCCTCTAGTGGTTCAGAGGAGAATATTCACAGTGGTGCCTGGGCCTTGGTGGGCGATGTGGCGCAGAGGTaGTCTGAAGGGGAAAGTTCC +
Preference number: 2 (lower is better)
Translates to: PSSGSEENIHSGAWALVGDVAQR*SEGESS
Trigger: GGAACTTTCCCCTTCAGATCACCTCTGCGCCACATC...GCCCACCAAGGCCCAGGCACCACTGTGAATATTCTCCTCTGAACCACTAGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR TCA 90 bp GCCAGGGAGTTCCAAGACCAAGAAGCCCAACTCTCACCAGCGGGGGCAGATGGGGCGAGGAGGCAATATTaGACCGTGAACTCAAGAAGA +
Preference number: 2 (lower is better)
Translates to: AREFQDQEAQLSPAGADGARRQY*TVNSRR
Trigger: TCTTCTTGAGTTCACGGTTCAATATTGCCTCCTCGC...CCCATCTGCCCCCGCTGGTGAGAGTTGGGCTTCTTGGTCTTGGAACTCCCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR GCA 90 bp TGCCTGGCCTGCCCTCTAGTGGTTCAGAGGAGAATATTCACAGTGGTGCCTGGGGAGTGTGGACTGGAGTaGATGGAGGAGGCATGGATG +
Preference number: 2 (lower is better)
Translates to: CLACPLVVQRRIFTVVPGECGLE*MEEAWM
Trigger: CATCCATGCCTCCTCCATGCACTCCAGTCCACACTC...CCCAGGCACCACTGTGAATATTCTCCTCTGAACCACTAGAGGGCAGGCCAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR GCA 90 bp AACAAACACAGCCCACTCAAGCAGTGGTGGCAACATTCTGTTAGAAAGGAGGGGGGGGCAGGGCCAGACTaGTCCCCACTGGGAAAGCAC +
Preference number: 2 (lower is better)
Translates to: NKHSPLKQWWQHSVRKEGGAGPD*SPLGKH
Trigger: GTGCTTTCCCAGTGGGGAGCAGTCTGGCCCTGCCCC...CCCCTCCTTTCTAACAGAATGTTGCCACCACTGCTTGAGTGGGCTGTGTTTGTT
57% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373095.6
3UTR-3UTR CCA 90 bp CTGGCTGGCAGCCAGAACCCACCTTCAAGCAAGTTACAAGGACTTGGGGGAAAGACGGGGAGTGTGGACTaGAGTGCATGGAGGAGGCAT +
Preference number: 2 (lower is better)
Translates to: LAGSQNPPSSKLQGLGGKTGSVD*SAWRRH
Trigger: ATGCCTCCTCCATGCACTCCAGTCCACACTCCCCGT...CTTTCCCCCAAGTCCTTGTAACTTGCTTGAAGGTGGGTTCTGGCTGCCAGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR CCA 90 bp CTGCCTGGCCTGCCCTCTAGTGGTTCAGAGGAGAATATTCACAGTGGTGCCTGGATGCTACGGGGAGTGTaGACTGGAGTGCATGGAGGA +
Preference number: 2 (lower is better)
Translates to: LPGLPSSGSEENIHSGAWMLRGV*TGVHGG
Trigger: TCCTCCATGCACTCCAGTCCACACTCCCCGTAGCAT...CCAGGCACCACTGTGAATATTCTCCTCTGAACCACTAGAGGGCAGGCCAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR CCA 90 bp CTGGTCTGGAGGAGTCTCCCCAACAGCGCCAAAGCTGGCTGTTTTCCACCCAAAGGGTCCCAGCATGGATaGGAGGGGCAATGGAATGAT +
Preference number: 2 (lower is better)
Translates to: LVWRSLPNSAKAGCFPPKGSQHG*EGQWND
Trigger: ATCATTCCATTGCCCCTCCCATCCATGCTGGGACCC...TTTGGGTGGAAAACAGCCAGCTTTGGCGCTGTTGGGGAGACTCCTCCAGACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR CCA 90 bp AGGCCAGGCTTTCTGGCCTCTGGTTCCAGCCAGCATCAATTTGGTTGTGGCCAATCCTTCTGGGGTTCCTaGTCTGGAGGAGTCTCCCCA +
Preference number: 2 (lower is better)
Translates to: RPGFLASGSSQHQFGCGQSFWGS*SGGVSP
Trigger: TGGGGAGACTCCTCCAGACCAGGAACCCCAGAAGGA...TTGGCCACAACCAAATTGATGCTGGCTGGAACCAGAGGCCAGAAAGCCTGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR TCA 90 bp CTGGTCTGGAGGAGTCTCCCCAACAGCGCCAAAGCTGGCTGTTTTCCACCCAAACAAGGAAGGGACAGCTaGAGCACTAAGCAGTCAGAC +
Preference number: 2 (lower is better)
Translates to: LVWRSLPNSAKAGCFPPKQGRDS*STKQSD
Trigger: GTCTGACTGCTTAGTGCTTCAGCTGTCCCTTCCTTG...TTTGGGTGGAAAACAGCCAGCTTTGGCGCTGTTGGGGAGACTCCTCCAGACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR GCA 90 bp AGGCCAGGCTTTCTGGCCTCTGGTTCCAGCCAGCATCAATTTGGTTGTGGCCAAGAATATTCACAGTGGTaGCTGGGCCTTGGTGGGCCA +
Preference number: 2 (lower is better)
Translates to: RPGFLASGSSQHQFGCGQEYSQW*LGLGGP
Trigger: TGGCCCACCAAGGCCCAGGCACCACTGTGAATATTC...TTGGCCACAACCAAATTGATGCTGGCTGGAACCAGAGGCCAGAAAGCCTGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR GCA 90 bp CAGAGGAGAACATGGACACCCTCCATCCTGATAGACATGCCATGTGGTCAGTTTAGCAGCGCCGGTCCTTaGCAGCTCCTTCTTGCCCAC +
Preference number: 2 (lower is better)
Translates to: QRRTWTPSILIDMPCGQFSSAGP*QLLLAH
Trigger: GTGGGCAAGAAGGAGCTGGCAAGGACCGGCGCTGCT...AAACTGACCACATGGCATGTCTATCAGGATGGAGGGTGTCCATGTTCTCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373095.6
3UTR-3UTR CCA 90 bp TGGGAATTCACTGAGCTCAAGGGGACAAGAGGGCTGAGGACAGGGCTCCCACATGGCATGGATGAGATGTaGCGCAGAGGTGATCTGAAG +
Preference number: 2 (lower is better)
Translates to: WEFTELKGTRGLRTGLPHGMDEM*RRGDLK
Trigger: CTTCAGATCACCTCTGCGCCACATCTCATCCATGCC...ATGTGGGAGCCCTGTCCTCAGCCCTCTTGTCCCCTTGAGCTCAGTGAATTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR CCA 90 bp AGGCCAGGCTTTCTGGCCTCTGGTTCCAGCCAGCATCAATTTGGTTGTGGCCAATCAGACAGTCACAGGTaGCAGGATTCCGGAGGTGGT +
Preference number: 2 (lower is better)
Translates to: RPGFLASGSSQHQFGCGQSDSHR*QDSGGG
Trigger: ACCACCTCCGGAATCCTGCCACCTGTGACTGTCTGA...TTGGCCACAACCAAATTGATGCTGGCTGGAACCAGAGGCCAGAAAGCCTGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR TCA 90 bp GGGACTGGCTGGCAGCCAGAACCCACCTTCAAGCAAGTTACAAGGACTTGGGGGAAGTTCCTCATGGAATaGTACAGGTCTGGACTCCAG +
Preference number: 2 (lower is better)
Translates to: GTGWQPEPTFKQVTRTWGKFLME*YRSGLQ
Trigger: CTGGAGTCCAGACCTGTATCATTCCATGAGGAACTT...CCCCCAAGTCCTTGTAACTTGCTTGAAGGTGGGTTCTGGCTGCCAGCCAGTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR TCA 90 bp AGGCCAGGCTTTCTGGCCTCTGGTTCCAGCCAGCATCAATTTGGTTGTGGCCAACAAGGAAGGGACAGCTaGAGCACTAAGCAGTCAGAC +
Preference number: 2 (lower is better)
Translates to: RPGFLASGSSQHQFGCGQQGRDS*STKQSD
Trigger: GTCTGACTGCTTAGTGCTTCAGCTGTCCCTTCCTTG...TTGGCCACAACCAAATTGATGCTGGCTGGAACCAGAGGCCAGAAAGCCTGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR TCA 90 bp CTGGTCTGGAGGAGTCTCCCCAACAGCGCCAAAGCTGGCTGTTTTCCACCCAAACTTCCAGAGGAAGGCTaGGGCTTTTCTGGTAAGGAA +
Preference number: 2 (lower is better)
Translates to: LVWRSLPNSAKAGCFPPKLPEEG*GFSGKE
Trigger: TTCCTTACCAGAAAAGCCTCAGCCTTCCTCTGGAAG...TTTGGGTGGAAAACAGCCAGCTTTGGCGCTGTTGGGGAGACTCCTCCAGACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR GCA 90 bp CTCCCCATCTTCTGGGGGCCAATTCGTCTGGACACTGTGCGGTCAGCTTCCTTTTTGCTCCAACCTTCCTaGAGGAAAACCAGCTGCTCA +
Preference number: 2 (lower is better)
Translates to: LPIFWGPIRLDTVRSASFLLQPS*RKTSCS
Trigger: TGAGCAGCTGGTTTTCCTGCAGGAAGGTTGGAGCAA...AAAGGAAGCTGACCGCACAGTGTCCAGACGAATTGGCCCCCAGAAGATGGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR GCA 90 bp TGGGAATTCACTGAGCTCAAGGGGACAAGAGGGCTGAGGACAGGGCTCCCACATTTGCTCCAACCTTCCTaGAGGAAAACCAGCTGCTCA +
Preference number: 2 (lower is better)
Translates to: WEFTELKGTRGLRTGLPHLLQPS*RKTSCS
Trigger: TGAGCAGCTGGTTTTCCTGCAGGAAGGTTGGAGCAA...ATGTGGGAGCCCTGTCCTCAGCCCTCTTGTCCCCTTGAGCTCAGTGAATTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR GCA 90 bp TGGGAATTCACTGAGCTCAAGGGGACAAGAGGGCTGAGGACAGGGCTCCCACATGCTTCCTTTTTAAAGTaGCAGTATCGGTGGGGCAGG +
Preference number: 2 (lower is better)
Translates to: WEFTELKGTRGLRTGLPHASFLK*QYRWGR
Trigger: CCTGCCCCACCGATACTGGCACTTTAAAAAGGAAGC...ATGTGGGAGCCCTGTCCTCAGCCCTCTTGTCCCCTTGAGCTCAGTGAATTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR CCA 90 bp GCAAGGGAACAACGGAGCAAGGCCCTGCTGCTAAGACGTGACCAAAGCCAGTGCGGGGAAAGTTCCTCATaGAATGATACAGGTCTGGAC +
Preference number: 2 (lower is better)
Translates to: AREQRSKALLLRRDQSQCGESSS*NDTGLD
Trigger: GTCCAGACCTGTATCATTCCATGAGGAACTTTCCCC...GCACTGGCTTTGGTCACGTCTTAGCAGCAGGGCCTTGCTCCGTTGTTCCCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR CCA 90 bp AGGCCAGGCTTTCTGGCCTCTGGTTCCAGCCAGCATCAATTTGGTTGTGGCCAACAGACTGCTCCCCACTaGGAAAGCACACCCCTTAAA +
Preference number: 2 (lower is better)
Translates to: RPGFLASGSSQHQFGCGQQTAPH*ESTPLK
Trigger: TTTAAGGGGTGTGCTTTCCCAGTGGGGAGCAGTCTG...TTGGCCACAACCAAATTGATGCTGGCTGGAACCAGAGGCCAGAAAGCCTGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR CCA 90 bp AACAAACACAGCCCACTCAAGCAGTGGTGGCAACATTCTGTTAGAAAGGAGGGGACCTCCCTCCTAGGCTaGGTGAGGTCACGCAGACAC +
Preference number: 2 (lower is better)
Translates to: NKHSPLKQWWQHSVRKEGTSLLG*VRSRRH
Trigger: GTGTCTGCGTGACCTCACCCAGCCTAGGAGGGAGGT...CCCCTCCTTTCTAACAGAATGTTGCCACCACTGCTTGAGTGGGCTGTGTTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373095.6
3UTR CAA 90 bp CAACAGCGCCAAAGCTGGCTGTTTTCCACCCAAAGCCCCAGAACTTaGAATGAGAGGCAAATCTACCCTGAATGCACCTCCCTCCTAGGC +
Preference number: 2 (lower is better)
Translates to: QQRQSWLFSTQSPRT*NERQIYPECTSLLG
Trigger: GCCTAGGAGGGAGGTGCATTCAGGGTAGATTTGCCTCTCATTCAAAGTTCTGGGGCTTTGGGTGGAAAACAGCCAGCTTTGGCGCTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR TCA 90 bp CTGGCTGGCAGCCAGAACCCACCTTCAAGCAAGTTACAAGGACTTGGGGGAAAGCTTCCAGAGGAAGGCTaGGGCTTTTCTGGTAAGGAA +
Preference number: 2 (lower is better)
Translates to: LAGSQNPPSSKLQGLGGKLPEEG*GFSGKE
Trigger: TTCCTTACCAGAAAAGCCTCAGCCTTCCTCTGGAAG...CTTTCCCCCAAGTCCTTGTAACTTGCTTGAAGGTGGGTTCTGGCTGCCAGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR CCA 90 bp TGCCTGGCCTGCCCTCTAGTGGTTCAGAGGAGAATATTCACAGTGGTGCCTGGGGGAATGATACAGGTCTaGACTCCAGAGAAAGCAGGA +
Preference number: 2 (lower is better)
Translates to: CLACPLVVQRRIFTVVPGGMIQV*TPEKAG
Trigger: TCCTGCTTTCTCTGGAGTCCAGACCTGTATCATTCC...CCCAGGCACCACTGTGAATATTCTCCTCTGAACCACTAGAGGGCAGGCCAGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR CCA 90 bp CTCCCCATCTTCTGGGGGCCAATTCGTCTGGACACTGTGCGGTCAGCTTCCTTTGGAATGATACAGGTCTaGACTCCAGAGAAAGCAGGA +
Preference number: 2 (lower is better)
Translates to: LPIFWGPIRLDTVRSASFGMIQV*TPEKAG
Trigger: TCCTGCTTTCTCTGGAGTCCAGACCTGTATCATTCC...AAAGGAAGCTGACCGCACAGTGTCCAGACGAATTGGCCCCCAGAAGATGGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR CCA 90 bp TGGGAATTCACTGAGCTCAAGGGGACAAGAGGGCTGAGGACAGGGCTCCCACATCAAGTTACAAGGACTTaGGGGAAAGTGCTGAGAGCA +
Preference number: 2 (lower is better)
Translates to: WEFTELKGTRGLRTGLPHQVTRT*GKVLRA
Trigger: TGCTCTCAGCACTTTCCCCCAAGTCCTTGTAACTTG...ATGTGGGAGCCCTGTCCTCAGCCCTCTTGTCCCCTTGAGCTCAGTGAATTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR TCA 90 bp AACAAACACAGCCCACTCAAGCAGTGGTGGCAACATTCTGTTAGAAAGGAGGGGGGCGCAGAGGTGATCTaGAGGGGAAAGTTCCTCATG +
Preference number: 2 (lower is better)
Translates to: NKHSPLKQWWQHSVRKEGGAEVI*RGKFLM
Trigger: CATGAGGAACTTTCCCCTTCAGATCACCTCTGCGCC...CCCCTCCTTTCTAACAGAATGTTGCCACCACTGCTTGAGTGGGCTGTGTTTGTT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373095.6
3UTR-3UTR GCA 90 bp CTCCCCATCTTCTGGGGGCCAATTCGTCTGGACACTGTGCGGTCAGCTTCCTTTAACAAATGCTGGAAATaGTCTGTTCCCAATGCCAGG +
Preference number: 2 (lower is better)
Translates to: LPIFWGPIRLDTVRSASFNKCWK*SVPNAR
Trigger: CCTGGCATTGGGAACAGAGCATTTCCAGCATTTGTT...AAAGGAAGCTGACCGCACAGTGTCCAGACGAATTGGCCCCCAGAAGATGGGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR CCA 90 bp CTGGCTGGCAGCCAGAACCCACCTTCAAGCAAGTTACAAGGACTTGGGGGAAAGGGGGAAAGTTCCTCATaGAATGATACAGGTCTGGAC +
Preference number: 2 (lower is better)
Translates to: LAGSQNPPSSKLQGLGGKGESSS*NDTGLD
Trigger: GTCCAGACCTGTATCATTCCATGAGGAACTTTCCCC...CTTTCCCCCAAGTCCTTGTAACTTGCTTGAAGGTGGGTTCTGGCTGCCAGCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR CCA 90 bp AACAAACACAGCCCACTCAAGCAGTGGTGGCAACATTCTGTTAGAAAGGAGGGGATGCTACGGGGAGTGTaGACTGGAGTGCATGGAGGA +
Preference number: 2 (lower is better)
Translates to: NKHSPLKQWWQHSVRKEGMLRGV*TGVHGG
Trigger: TCCTCCATGCACTCCAGTCCACACTCCCCGTAGCAT...CCCCTCCTTTCTAACAGAATGTTGCCACCACTGCTTGAGTGGGCTGTGTTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373095.6
3UTR-3UTR CCA 90 bp AACAAACACAGCCCACTCAAGCAGTGGTGGCAACATTCTGTTAGAAAGGAGGGGGGGTCCCAGCATGGATaGGAGGGGCAATGGAATGAT +
Preference number: 2 (lower is better)
Translates to: NKHSPLKQWWQHSVRKEGGSQHG*EGQWND
Trigger: ATCATTCCATTGCCCCTCCCATCCATGCTGGGACCC...CCCCTCCTTTCTAACAGAATGTTGCCACCACTGCTTGAGTGGGCTGTGTTTGTT
52% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000373095.6
3UTR-3UTR TCA 90 bp CAGAGGAGAACATGGACACCCTCCATCCTGATAGACATGCCATGTGGTCAGTTTAAGTTCCTCATGGAATaGTACAGGTCTGGACTCCAG +
Preference number: 2 (lower is better)
Translates to: QRRTWTPSILIDMPCGQFKFLME*YRSGLQ
Trigger: CTGGAGTCCAGACCTGTATCATTCCATGAGGAACTT...AAACTGACCACATGGCATGTCTATCAGGATGGAGGGTGTCCATGTTCTCCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373095.6
3UTR GCA 72 bp AGTCTCCAGCAGCGCCGGTCCTTGCCAGCTCCTTCTTaGCCACAAGCTGCACGGGCCCGCCTGGCCTGCCTG +
Preference number: 3 (lower is better)
Translates to: SLQQRRSLPAPS*PQAARARLACL
Trigger: CAGGCAGGCCAGGCGGGCCCGTGCAGCTTGTGGGCAAGAAGGAGCTGGCAAGGACCGGCGCTGCTGGAGACT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR TCA 72 bp GAGGCAGGGGTCTCGATCTGGAGTGTGGGTGGGGTCTaGGGTCATGGCTCCCAGGAAGAGGCCGCCAGCAGG +
Preference number: 3 (lower is better)
Translates to: EAGVSIWSVGGV*GHGSQEEAASR
Trigger: CCTGCTGGCGGCCTCTTCCTGGGAGCCATGACCTCAGACCCCACCCACACTCCAGATCGAGACCCCTGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR CAA 90 bp GCCAGGGAGTTCCAAGACCAAGAAGCCCAACTCTCACCAGCGGGGGCAGATGGGAGGAGCCCTTCCCCCTaGCCCAGAACGGGGGATGCT +
Preference number: 3 (lower is better)
Translates to: AREFQDQEAQLSPAGADGRSPSP*PRTGDA
Trigger: AGCATCCCCCGTTCTGGGCAAGGGGGAAGGGCTCCT...CCCATCTGCCCCCGCTGGTGAGAGTTGGGCTTCTTGGTCTTGGAACTCCCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR TCA 72 bp GCCAGTATCGGTGGGGCAGGAAGGGACTCTCAGGGCTaGGCAGAGCCTTCTCCAGCGCGAGCGAACACTCTG +
Preference number: 3 (lower is better)
Translates to: ASIGGAGRDSQG*AEPSPARANTL
Trigger: CAGAGTGTTCGCTCGCGCTGGAGAAGGCTCTGCTCAGCCCTGAGAGTCCCTTCCTGCCCCACCGATACTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR CCA 72 bp CATTTAGGAGCCGCTGCATGTCCTCAGCCAGAGGGCTaGGTCAGTCTCCAGCAGCGCCGGTCCTTGCCAGCT +
Preference number: 3 (lower is better)
Translates to: HLGAAACPQPEG*VSLQQRRSLPA
Trigger: AGCTGGCAAGGACCGGCGCTGCTGGAGACTGACCCAGCCCTCTGGCTGAGGACATGCAGCGGCTCCTAAATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR TCA 72 bp GGTGGGAATTCACTGAGCTCAAGGGGACAAGAGGGCTaGGGACAGGGCTCCCACATGGGGACAAGGCCAGGC +
Preference number: 3 (lower is better)
Translates to: GGNSLSSRGQEG*GQGSHMGTRPG
Trigger: GCCTGGCCTTGTCCCCATGTGGGAGCCCTGTCCTCAGCCCTCTTGTCCCCTTGAGCTCAGTGAATTCCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR CCA 72 bp TTCCTGCAGGAAAACCAGCTGCTCAGGACCCAGCCCTaGGCAGAGGGCACGGTCGGTGCTCAGACCTTTCTC +
Preference number: 3 (lower is better)
Translates to: FLQENQLLRTQP*AEGTVGAQTFL
Trigger: GAGAAAGGTCTGAGCACCGACCGTGCCCTCTGCCCAGGGCTGGGTCCTGAGCAGCTGGTTTTCCTGCAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR CCA 72 bp GTTCAGAGGAGAATATTCACAGTGGTGCCTGGGCCTTaGTGGGCCAGGAGGGTCCCAGCATGGATGGGAGGG +
Preference number: 3 (lower is better)
Translates to: VQRRIFTVVPGP*WARRVPAWMGG
Trigger: CCCTCCCATCCATGCTGGGACCCTCCTGGCCCACCAAGGCCCAGGCACCACTGTGAATATTCTCCTCTGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR TCA 72 bp GCCAGCAGGTCCCCCAGGACACAAGGAAGGGACAGCTaGAGCACTAAGCAGTCAGACAGTCACAGGTGGCAG +
Preference number: 3 (lower is better)
Translates to: ASRSPRTQGRDS*STKQSDSHRWQ
Trigger: CTGCCACCTGTGACTGTCTGACTGCTTAGTGCTTCAGCTGTCCCTTCCTTGTGTCCTGGGGGACCTGCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR TCA 72 bp AAGTCCAGGAGCTGTGGGCACCTGGTGGGAATTCACTaGGCTCAAGGGGACAAGAGGGCTGAGGACAGGGCT +
Preference number: 3 (lower is better)
Translates to: KSRSCGHLVGIH*AQGDKRAEDRA
Trigger: AGCCCTGTCCTCAGCCCTCTTGTCCCCTTGAGCTCAGTGAATTCCCACCAGGTGCCCACAGCTCCTGGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR GCA 72 bp CCCTCAGCCACAGGCATCTCTACATTTAGGAGCCGCTaGATGTCCTCAGCCAGAGGGCTGGGTCAGTCTCCA +
Preference number: 3 (lower is better)
Translates to: PSATGISTFRSR*MSSARGLGQSP
Trigger: TGGAGACTGACCCAGCCCTCTGGCTGAGGACATGCAGCGGCTCCTAAATGTAGAGATGCCTGTGGCTGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR CAA 90 bp CCCACATGGGGACAAGGCCAGGCTTTCTGGCCTCTGGTTCCAGCCAGCATCAATAGTGACCAGGAGTCCTaGGGAAGGAGCTCAGGGAAG +
Preference number: 3 (lower is better)
Translates to: PTWGQGQAFWPLVPASINSDQES*GRSSGK
Trigger: CTTCCCTGAGCTCCTTCCCAAGGACTCCTGGTCACT...ATTGATGCTGGCTGGAACCAGAGGCCAGAAAGCCTGGCCTTGTCCCCATGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR CAA 90 bp AGGAAGGCTGAGGCTTTTCTGGTAAGGAAGCCAGCTCCGGACCAGTCCAGCCACAGTGACCAGGAGTCCTaGGGAAGGAGCTCAGGGAAG +
Preference number: 3 (lower is better)
Translates to: RKAEAFLVRKPAPDQSSHSDQES*GRSSGK
Trigger: CTTCCCTGAGCTCCTTCCCAAGGACTCCTGGTCACT...GTGGCTGGACTGGTCCGGAGCTGGCTTCCTTACCAGAAAAGCCTCAGCCTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR GCA 72 bp GTCTGGGCAGCTGACCCTGAGGGCAGAGAAGGACTTTaGTTGCTCCAACCTTCCTGCAGGAAAACCAGCTGC +
Preference number: 3 (lower is better)
Translates to: VWAADPEGREGL*LLQPSCRKTSC
Trigger: GCAGCTGGTTTTCCTGCAGGAAGGTTGGAGCAAGCAAAGTCCTTCTCTGCCCTCAGGGTCAGCTGCCCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR CCA 72 bp CAGACACAGAAGGGCAGGACAGAACTCCCCATCTTCTaGGGGCCAATTCGTCTGGACACTGTGCGGTCAGCT +
Preference number: 3 (lower is better)
Translates to: QTQKGRTELPIF*GPIRLDTVRSA
Trigger: AGCTGACCGCACAGTGTCCAGACGAATTGGCCCCCAGAAGATGGGGAGTTCTGTCCTGCCCTTCTGTGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR CCA 72 bp AGGCAAATCTACCCTGAATGCACCTCCCTCCTAGGCTaGGTGAGGTCACGCAGACACAGAAGGGCAGGACAG +
Preference number: 3 (lower is better)
Translates to: RQIYPECTSLLG*VRSRRHRRAGQ
Trigger: CTGTCCTGCCCTTCTGTGTCTGCGTGACCTCACCCAGCCTAGGAGGGAGGTGCATTCAGGGTAGATTTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR CCA 72 bp GATGGGAGGGGCAATGGAATGATGCTACGGGGAGTGTaGACTGGAGTGCATGGAGGAGGCATGGATGAGATG +
Preference number: 3 (lower is better)
Translates to: DGRGNGMMLRGV*TGVHGGGMDEM
Trigger: CATCTCATCCATGCCTCCTCCATGCACTCCAGTCCACACTCCCCGTAGCATCATTCCATTGCCCCTCCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR CAA 90 bp CTCCCCATCTTCTGGGGGCCAATTCGTCTGGACACTGTGCGGTCAGCTTCCTTTGCAAGTTACAAGGACTaGGGGGAAAGTGCTGAGAGC +
Preference number: 3 (lower is better)
Translates to: LPIFWGPIRLDTVRSASFASYKD*GESAES
Trigger: GCTCTCAGCACTTTCCCCCAAGTCCTTGTAACTTGC...AAAGGAAGCTGACCGCACAGTGTCCAGACGAATTGGCCCCCAGAAGATGGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR CCA 72 bp TCTGGCCTCTGGTTCCAGCCAGCATCAATTTGGTTGTaGCCAAATTCTCAGTCCAATCACCCTGGCCCAGGG +
Preference number: 3 (lower is better)
Translates to: SGLWFQPASIWL*PNSQSNHPGPG
Trigger: CCCTGGGCCAGGGTGATTGGACTGAGAATTTGGCCACAACCAAATTGATGCTGGCTGGAACCAGAGGCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR CCA 72 bp CTCCCACATGGGGACAAGGCCAGGCTTTCTGGCCTCTaGTTCCAGCCAGCATCAATTTGGTTGTGGCCAAAT +
Preference number: 3 (lower is better)
Translates to: LPHGDKARLSGL*FQPASIWLWPN
Trigger: ATTTGGCCACAACCAAATTGATGCTGGCTGGAACCAGAGGCCAGAAAGCCTGGCCTTGTCCCCATGTGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR CAA 90 bp AGGCCAGGCTTTCTGGCCTCTGGTTCCAGCCAGCATCAATTTGGTTGTGGCCAAGCAAGTTACAAGGACTaGGGGGAAAGTGCTGAGAGC +
Preference number: 3 (lower is better)
Translates to: RPGFLASGSSQHQFGCGQASYKD*GESAES
Trigger: GCTCTCAGCACTTTCCCCCAAGTCCTTGTAACTTGC...TTGGCCACAACCAAATTGATGCTGGCTGGAACCAGAGGCCAGAAAGCCTGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR GCA 72 bp CCCAGAACTTTGAATGAGAGGCAAATCTACCCTGAATaGACCTCCCTCCTAGGCTGGGTGAGGTCACGCAGA +
Preference number: 3 (lower is better)
Translates to: PRTLNERQIYPE*TSLLGWVRSRR
Trigger: TCTGCGTGACCTCACCCAGCCTAGGAGGGAGGTGCATTCAGGGTAGATTTGCCTCTCATTCAAAGTTCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR CCA 72 bp TGGACTGGAGTGCATGGAGGAGGCATGGATGAGATGTaGCGCAGAGGTGATCTGAAGGGGAAAGTTCCTCAT +
Preference number: 3 (lower is better)
Translates to: WTGVHGGGMDEM*RRGDLKGKVPH
Trigger: ATGAGGAACTTTCCCCTTCAGATCACCTCTGCGCCACATCTCATCCATGCCTCCTCCATGCACTCCAGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR-3UTR CAA 90 bp AGGCCAGGCTTTCTGGCCTCTGGTTCCAGCCAGCATCAATTTGGTTGTGGCCAAGGCGAGGAGGCAATATaGAACCGTGAACTCAAGAAG +
Preference number: 3 (lower is better)
Translates to: RPGFLASGSSQHQFGCGQGEEAI*NRELKK
Trigger: CTTCTTGAGTTCACGGTTCAATATTGCCTCCTCGCC...TTGGCCACAACCAAATTGATGCTGGCTGGAACCAGAGGCCAGAAAGCCTGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR CCA 72 bp TTTAAAAGGGGCAGGAGAGTTTGTCCAGGGACTGGCTaGCAGCCAGAACCCACCTTCAAGCAAGTTACAAGG +
Preference number: 3 (lower is better)
Translates to: FKRGRRVCPGTG*QPEPTFKQVTR
Trigger: CCTTGTAACTTGCTTGAAGGTGGGTTCTGGCTGCCAGCCAGTCCCTGGACAAACTCTCCTGCCCCTTTTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR CCA 72 bp AGGCTTTCTGGCCTCTGGTTCCAGCCAGCATCAATTTaGTTGTGGCCAAATTCTCAGTCCAATCACCCTGGC +
Preference number: 3 (lower is better)
Translates to: RLSGLWFQPASI*LWPNSQSNHPG
Trigger: GCCAGGGTGATTGGACTGAGAATTTGGCCACAACCAAATTGATGCTGGCTGGAACCAGAGGCCAGAAAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR CCA 72 bp CTGGGACAGAGGAACAAACACAGCCCACTCAAGCAGTaGTGGCAACATTCTGTTAGAAAGGAGGGGAGTCAA +
Preference number: 3 (lower is better)
Translates to: LGQRNKHSPLKQ*WQHSVRKEGSQ
Trigger: TTGACTCCCCTCCTTTCTAACAGAATGTTGCCACCACTGCTTGAGTGGGCTGTGTTTGTTCCTCTGTCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373095.6
3UTR TCA 72 bp AAAGCTGGCTGTTTTCCACCCAAAGCCCCAGAACTTTaGATGAGAGGCAAATCTACCCTGAATGCACCTCCC +
Preference number: 3 (lower is better)
Translates to: KAGCFPPKAPEL*MRGKSTLNAPP
Trigger: GGGAGGTGCATTCAGGGTAGATTTGCCTCTCATTCAAAGTTCTGGGGCTTTGGGTGGAAAACAGCCAGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR CCA 72 bp GGACAGAGGAACAAACACAGCCCACTCAAGCAGTGGTaGCAACATTCTGTTAGAAAGGAGGGGAGTCAAAGA +
Preference number: 3 (lower is better)
Translates to: GQRNKHSPLKQW*QHSVRKEGSQR
Trigger: TCTTTGACTCCCCTCCTTTCTAACAGAATGTTGCCACCACTGCTTGAGTGGGCTGTGTTTGTTCCTCTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373095.6
3UTR CCA 72 bp CTCTCTCAATATATAGAATTTGAAGTCCAGGAGCTGTaGGCACCTGGTGGGAATTCACTGAGCTCAAGGGGA +
Preference number: 3 (lower is better)
Translates to: LSQYIEFEVQEL*APGGNSLSSRG
Trigger: TCCCCTTGAGCTCAGTGAATTCCCACCAGGTGCCCACAGCTCCTGGACTTCAAATTCTATATATTGAGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR CCA 72 bp AGTTCCCCTAACAATGTTATTTTCTACAACAGAAGCTaGGACAGAGGAACAAACACAGCCCACTCAAGCAGT +
Preference number: 3 (lower is better)
Translates to: SSPNNVIFYNRS*DRGTNTAHSSS
Trigger: ACTGCTTGAGTGGGCTGTGTTTGTTCCTCTGTCCCAGCTTCTGTTGTAGAAAATAACATTGTTAGGGGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373095.6
CDS-3UTR CCA 90 bp GCCAGGGAGTTCCAAGACCAAGAAGCCCAACTCTCACCAGCGGGGGCAGATGGGGGAACCCTCCCAGCCTaGGGAGGGCACCTGCACCCC +
Preference number: 4 (lower is better)
Translates to: AREFQDQEAQLSPAGADGGTLPA*GGHLHP
Trigger: GGGGTGCAGGTGCCCTCCCCAGGCTGGGAGGGTTCC...CCCATCTGCCCCCGCTGGTGAGAGTTGGGCTTCTTGGTCTTGGAACTCCCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR TCA 90 bp TGCCTGGCCTGCCCTCTAGTGGTTCAGAGGAGAATATTCACAGTGGTGCCTGGGGGCGGCCAGCGCAGGTaGAGCCGGGGAAGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: CLACPLVVQRRIFTVVPGGGQRR*SRGRWG
Trigger: GCCCCACCTTCCCCGGCTTCACCTGCGCTGGCCGCC...CCCAGGCACCACTGTGAATATTCTCCTCTGAACCACTAGAGGGCAGGCCAGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373095.6
CDS-3UTR GCA 90 bp TGCAGGAAAACCAGCTGCTCAGGACCCAGCCCTGGGCAGAGGGCACGGTCGGTGCCCTGGGCCTCTGACTaGACAGCAGGCAGTGACCAG +
Preference number: 4 (lower is better)
Translates to: CRKTSCSGPSPGQRARSVPWASD*TAGSDQ
Trigger: CTGGTCACTGCCTGCTGTGCAGTCAGAGGCCCAGGG...CACCGACCGTGCCCTCTGCCCAGGGCTGGGTCCTGAGCAGCTGGTTTTCCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp GCCAGGGAGTTCCAAGACCAAGAAGCCCAACTCTCACCAGCGGGGGCAGATGGGAGGCGCTGCTGCTGGTaGACGTGTTGCGGCGGTGCG +
Preference number: 4 (lower is better)
Translates to: AREFQDQEAQLSPAGADGRRCCW*TCCGGA
Trigger: CGCACCGCCGCAACACGTCCACCAGCAGCAGCGCCT...CCCATCTGCCCCCGCTGGTGAGAGTTGGGCTTCTTGGTCTTGGAACTCCCTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp AGGGCTCCCACATGGGGACAAGGCCAGGCTTTCTGGCCTCTGGTTCCAGCCAGCGGATGCCGCTCAGCGTaGCAGAGCCATCGCGGCTCA +
Preference number: 4 (lower is better)
Translates to: RAPTWGQGQAFWPLVPASGCRSA*QSHRGS
Trigger: TGAGCCGCGATGGCTCTGCCACGCTGAGCGGCATCC...GCTGGCTGGAACCAGAGGCCAGAAAGCCTGGCCTTGTCCCCATGTGGGAGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR GCA 90 bp CCCACATGGGGACAAGGCCAGGCTTTCTGGCCTCTGGTTCCAGCCAGCATCAATGGCCCTCCACGGTCATaGCAAGGCCCCCAGAGGCGC +
Preference number: 4 (lower is better)
Translates to: PTWGQGQAFWPLVPASINGPPRS*QGPQRR
Trigger: GCGCCTCTGGGGGCCTTGGCATGACCGTGGAGGGCC...ATTGATGCTGGCTGGAACCAGAGGCCAGAAAGCCTGGCCTTGTCCCCATGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR GCA 90 bp CCCACATGGGGACAAGGCCAGGCTTTCTGGCCTCTGGTTCCAGCCAGCATCAATGGTGCTCCCGCTCACTaGCCTCAGGGCCCTCCACGG +
Preference number: 4 (lower is better)
Translates to: PTWGQGQAFWPLVPASINGAPAH*PQGPPR
Trigger: CCGTGGAGGGCCCTGAGGGCAGTGAGCGGGAGCACC...ATTGATGCTGGCTGGAACCAGAGGCCAGAAAGCCTGGCCTTGTCCCCATGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR GCA 90 bp ACCAAAGCCAGTGCTCCTGGAGTGAGTGGGGACACAGGTAGAGAGGCCCCCTCATTCTCCGGGGGCCGGTaGTCCCGCTCACTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: TKASAPGVSGDTGREAPSFSGGR*SRSLPS
Trigger: TGAGGGCAGTGAGCGGGAGCACCGGCCCCCGGAGAA...TGAGGGGGCCTCTCTACCTGTGTCCCCACTCACTCCAGGAGCACTGGCTTTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR GCA 90 bp TCTGGAGGAGTCTCCCCAACAGCGCCAAAGCTGGCTGTTTTCCACCCAAAGCCCGAGCGATCGGACAGATaGAGGGGCCGGGGTGGCCGC +
Preference number: 4 (lower is better)
Translates to: SGGVSPTAPKLAVFHPKPERSDR*RGRGGR
Trigger: GCGGCCACCCCGGCCCCTGCATCTGTCCGATCGCTC...GGGCTTTGGGTGGAAAACAGCCAGCTTTGGCGCTGTTGGGGAGACTCCTCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR GCA 90 bp CCCACTGGGAAAGCACACCCCTTAAAGGAGCCCTTCCCCCTTGCCCAGAACGGGTTCTTGCCCACAAGCTaGACGGGCCCGCCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: PTGKAHPLKEPFPLAQNGFLPTS*TGPPGL
Trigger: CAGGCCAGGCGGGCCCGTGCAGCTTGTGGGCAAGAA...CCCGTTCTGGGCAAGGGGGAAGGGCTCCTTTAAGGGGTGTGCTTTCCCAGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR GCA 90 bp TGCAGGAAAACCAGCTGCTCAGGACCCAGCCCTGGGCAGAGGGCACGGTCGGTGGCCCAGAACGGGGGATaGTTCCAGAGGAAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: CRKTSCSGPSPGQRARSVAQNGG*FQRKAE
Trigger: CTCAGCCTTCCTCTGGAAGCATCCCCCGTTCTGGGC...CACCGACCGTGCCCTCTGCCCAGGGCTGGGTCCTGAGCAGCTGGTTTTCCTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp CCCACTGGGAAAGCACACCCCTTAAAGGAGCCCTTCCCCCTTGCCCAGAACGGGGGGAGTGTGGGCTCCTaGCTGGCGGAAGCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: PTGKAHPLKEPFPLAQNGGSVGS*LAEAQK
Trigger: CTTCTGGGCTTCCGCCAGCCAGGAGCCCACACTCCC...CCCGTTCTGGGCAAGGGGGAAGGGCTCCTTTAAGGGGTGTGCTTTCCCAGTGGG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000373084.8
CDS-3UTR CCA 90 bp TGCAGGAAAACCAGCTGCTCAGGACCCAGCCCTGGGCAGAGGGCACGGTCGGTGCTGGAGTTGCGGGAGTaGCCAGAGTGGAACACCTCC +
Preference number: 4 (lower is better)
Translates to: CRKTSCSGPSPGQRARSVLELRE*PEWNTS
Trigger: GGAGGTGTTCCACTCTGGCCACTCCCGCAACTCCAG...CACCGACCGTGCCCTCTGCCCAGGGCTGGGTCCTGAGCAGCTGGTTTTCCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp GCCAGGGAGTTCCAAGACCAAGAAGCCCAACTCTCACCAGCGGGGGCAGATGGGGGATGCCGCTCAGCGTaGCAGAGCCATCGCGGCTCA +
Preference number: 4 (lower is better)
Translates to: AREFQDQEAQLSPAGADGGCRSA*QSHRGS
Trigger: TGAGCCGCGATGGCTCTGCCACGCTGAGCGGCATCC...CCCATCTGCCCCCGCTGGTGAGAGTTGGGCTTCTTGGTCTTGGAACTCCCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp AGGGCTCCCACATGGGGACAAGGCCAGGCTTTCTGGCCTCTGGTTCCAGCCAGCACCCTGGTGGCAAGCTaGATGCCGCTCAGCGTGGCA +
Preference number: 4 (lower is better)
Translates to: RAPTWGQGQAFWPLVPASTLVAS*MPLSVA
Trigger: TGCCACGCTGAGCGGCATCCAGCTTGCCACCAGGGT...GCTGGCTGGAACCAGAGGCCAGAAAGCCTGGCCTTGTCCCCATGTGGGAGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp GCCAGGGAGTTCCAAGACCAAGAAGCCCAACTCTCACCAGCGGGGGCAGATGGGTCAGTCCAATCACCCTaGCCCAGGGCCTGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: AREFQDQEAQLSPAGADGSVQSP*PRAWRG
Trigger: CCCACGCCAGGCCCTGGGCCAGGGTGATTGGACTGA...CCCATCTGCCCCCGCTGGTGAGAGTTGGGCTTCTTGGTCTTGGAACTCCCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp AGGGCTCCCACATGGGGACAAGGCCAGGCTTTCTGGCCTCTGGTTCCAGCCAGCTGCTGCCCCCACTGCTaGTCCCACCACCCTTACACG +
Preference number: 4 (lower is better)
Translates to: RAPTWGQGQAFWPLVPASCCPHC*SHHPYT
Trigger: CGTGTAAGGGTGGTGGGACCAGCAGTGGGGGCAGCA...GCTGGCTGGAACCAGAGGCCAGAAAGCCTGGCCTTGTCCCCATGTGGGAGCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR GCA 90 bp TGCAGGAAAACCAGCTGCTCAGGACCCAGCCCTGGGCAGAGGGCACGGTCGGTGTGGCATAGCTGGAGTTaGGGGAGTGGCCAGAGTGGA +
Preference number: 4 (lower is better)
Translates to: CRKTSCSGPSPGQRARSVWHSWS*GSGQSG
Trigger: TCCACTCTGGCCACTCCCGCAACTCCAGCTATGCCA...CACCGACCGTGCCCTCTGCCCAGGGCTGGGTCCTGAGCAGCTGGTTTTCCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR GCA 90 bp AGGAAGGCTGAGGCTTTTCTGGTAAGGAAGCCAGCTCCGGACCAGTCCAGCCACCCCCAGAGGCGCTGCTaGTGGTGGACGTGTTGCGGC +
Preference number: 4 (lower is better)
Translates to: RKAEAFLVRKPAPDQSSHPQRRC*WWTCCG
Trigger: GCCGCAACACGTCCACCAGCAGCAGCGCCTCTGGGG...GTGGCTGGACTGGTCCGGAGCTGGCTTCCTTACCAGAAAAGCCTCAGCCTTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR GCA 90 bp CCCTCAGCCACAGGCATCTCTACATTTAGGAGCCGCTGCATGTCCTCAGCCAGAGGCCCTCCACGGTCATaGCAAGGCCCCCAGAGGCGC +
Preference number: 4 (lower is better)
Translates to: PSATGISTFRSRCMSSARGPPRS*QGPQRR
Trigger: GCGCCTCTGGGGGCCTTGGCATGACCGTGGAGGGCC...TCTGGCTGAGGACATGCAGCGGCTCCTAAATGTAGAGATGCCTGTGGCTGAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR GCA 90 bp CCCTCAGCCACAGGCATCTCTACATTTAGGAGCCGCTGCATGTCCTCAGCCAGAGAGCGATCGGACAGATaGAGGGGCCGGGGTGGCCGC +
Preference number: 4 (lower is better)
Translates to: PSATGISTFRSRCMSSARERSDR*RGRGGR
Trigger: GCGGCCACCCCGGCCCCTGCATCTGTCCGATCGCTC...TCTGGCTGAGGACATGCAGCGGCTCCTAAATGTAGAGATGCCTGTGGCTGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR GCA 90 bp TGCAGGAAAACCAGCTGCTCAGGACCCAGCCCTGGGCAGAGGGCACGGTCGGTGCGTGACCAAAGCCAGTaGTCCTGGAGTGAGTGGGGA +
Preference number: 4 (lower is better)
Translates to: CRKTSCSGPSPGQRARSVRDQSQ*SWSEWG
Trigger: TCCCCACTCACTCCAGGAGCACTGGCTTTGGTCACG...CACCGACCGTGCCCTCTGCCCAGGGCTGGGTCCTGAGCAGCTGGTTTTCCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR GCA 90 bp ACCAAAGCCAGTGCTCCTGGAGTGAGTGGGGACACAGGTAGAGAGGCCCCCTCAGGGGCAGGGCCAGACTaGTCCCCACTGGGAAAGCAC +
Preference number: 4 (lower is better)
Translates to: TKASAPGVSGDTGREAPSGAGPD*SPLGKH
Trigger: GTGCTTTCCCAGTGGGGAGCAGTCTGGCCCTGCCCC...TGAGGGGGCCTCTCTACCTGTGTCCCCACTCACTCCAGGAGCACTGGCTTTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR GCA 90 bp CTGCCTGGCCTGCCCTCTAGTGGTTCAGAGGAGAATATTCACAGTGGTGCCTGGGCTGGGCCCCAGCGCTaGTGGAACCAGCCGGCAGGT +
Preference number: 4 (lower is better)
Translates to: LPGLPSSGSEENIHSGAWAGPQR*WNQPAG
Trigger: ACCTGCCGGCTGGTTCCAGCAGCGCTGGGGCCCAGC...CCAGGCACCACTGTGAATATTCTCCTCTGAACCACTAGAGGGCAGGCCAGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR GCA 90 bp GCCAGGGAGTTCCAAGACCAAGAAGCCCAACTCTCACCAGCGGGGGCAGATGGGTGCTGCTGCCCCCACTaGTGGTCCCACCACCCTTAC +
Preference number: 4 (lower is better)
Translates to: AREFQDQEAQLSPAGADGCCCPH*WSHHPY
Trigger: GTAAGGGTGGTGGGACCAGCAGTGGGGGCAGCAGCA...CCCATCTGCCCCCGCTGGTGAGAGTTGGGCTTCTTGGTCTTGGAACTCCCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR GCA 90 bp ACCAAAGCCAGTGCTCCTGGAGTGAGTGGGGACACAGGTAGAGAGGCCCCCTCAGCCAGAGCCCGATGCTaGGAGGCGCCGCTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: TKASAPGVSGDTGREAPSARARC*EAPLGE
Trigger: TTCTCCAAGCGGCGCCTCGCAGCATCGGGCTCTGGC...TGAGGGGGCCTCTCTACCTGTGTCCCCACTCACTCCAGGAGCACTGGCTTTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373095.6
CDS-3UTR GCA 90 bp TCTGGAGGAGTCTCCCCAACAGCGCCAAAGCTGGCTGTTTTCCACCCAAAGCCCGCGGCCGCGCTGGCTTaGAGCATCCCGAGACGCGAT +
Preference number: 4 (lower is better)
Translates to: SGGVSPTAPKLAVFHPKPAAALA*SIPRRD
Trigger: ATCGCGTCTCGGGATGCTGCAAGCCAGCGCGGCCGC...GGGCTTTGGGTGGAAAACAGCCAGCTTTGGCGCTGTTGGGGAGACTCCTCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373095.6
CDS-3UTR CCA 90 bp GCCAGGGAGTTCCAAGACCAAGAAGCCCAACTCTCACCAGCGGGGGCAGATGGGGGGCTGGACAGGTTCTaGTCGGGTTCCTCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: AREFQDQEAQLSPAGADGGLDRF*SGSSGS
Trigger: GCTGCCAGAGGAACCCGACCAGAACCTGTCCAGCCC...CCCATCTGCCCCCGCTGGTGAGAGTTGGGCTTCTTGGTCTTGGAACTCCCTGGC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp CCCACTGGGAAAGCACACCCCTTAAAGGAGCCCTTCCCCCTTGCCCAGAACGGGCGGGAGTGGCCAGAGTaGAACACCTCCTCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: PTGKAHPLKEPFPLAQNGREWPE*NTSSGL
Trigger: CAGCCCTGAGGAGGTGTTCCACTCTGGCCACTCCCG...CCCGTTCTGGGCAAGGGGGAAGGGCTCCTTTAAGGGGTGTGCTTTCCCAGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp ACCAAAGCCAGTGCTCCTGGAGTGAGTGGGGACACAGGTAGAGAGGCCCCCTCAGAGGTGAGGGGCCAGTaGGACTGTGCTGGGGGTGAG +
Preference number: 4 (lower is better)
Translates to: TKASAPGVSGDTGREAPSEVRGQ*DCAGGE
Trigger: CTCACCCCCAGCACAGTCCCACTGGCCCCTCACCTC...TGAGGGGGCCTCTCTACCTGTGTCCCCACTCACTCCAGGAGCACTGGCTTTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp AGGGCTCCCACATGGGGACAAGGCCAGGCTTTCTGGCCTCTGGTTCCAGCCAGCTGTCCAGGGACTGGCTaGCAGCCAGAACCCACCTTC +
Preference number: 4 (lower is better)
Translates to: RAPTWGQGQAFWPLVPASCPGTG*QPEPTF
Trigger: GAAGGTGGGTTCTGGCTGCCAGCCAGTCCCTGGACA...GCTGGCTGGAACCAGAGGCCAGAAAGCCTGGCCTTGTCCCCATGTGGGAGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp TGCCTGGCCTGCCCTCTAGTGGTTCAGAGGAGAATATTCACAGTGGTGCCTGGGGGAACCCTCCCAGCCTaGGGAGGGCACCTGCACCCC +
Preference number: 4 (lower is better)
Translates to: CLACPLVVQRRIFTVVPGGTLPA*GGHLHP
Trigger: GGGGTGCAGGTGCCCTCCCCAGGCTGGGAGGGTTCC...CCCAGGCACCACTGTGAATATTCTCCTCTGAACCACTAGAGGGCAGGCCAGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp CCCACTGGGAAAGCACACCCCTTAAAGGAGCCCTTCCCCCTTGCCCAGAACGGGTGCTGCCCCCACTGCTaGTCCCACCACCCTTACACG +
Preference number: 4 (lower is better)
Translates to: PTGKAHPLKEPFPLAQNGCCPHC*SHHPYT
Trigger: CGTGTAAGGGTGGTGGGACCAGCAGTGGGGGCAGCA...CCCGTTCTGGGCAAGGGGGAAGGGCTCCTTTAAGGGGTGTGCTTTCCCAGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR TCA 90 bp GGATGCTTCCAGAGGAAGGCTGAGGCTTTTCTGGTAAGGAAGCCAGCTCCGGACGCGGTGCGTCAGGTCTaGGAGGCTGGAGGAGCGCGA +
Preference number: 4 (lower is better)
Translates to: GCFQRKAEAFLVRKPAPDAVRQV*EAGGAR
Trigger: TCGCGCTCCTCCAGCCTCTCAGACCTGACGCACCGC...GTCCGGAGCTGGCTTCCTTACCAGAAAAGCCTCAGCCTTCCTCTGGAAGCATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR TCA 90 bp GGGGGTGAGCATGTGCAAAGTGCAGGCTGCAAGGCAGCGGGAGGACATTTGCCGCACGGGTCTCAGACCTaGGCTGGAGCTAACTGGAGG +
Preference number: 4 (lower is better)
Translates to: GGEHVQSAGCKAAGGHLPHGSQT*AGANWR
Trigger: CCTCCAGTTAGCTCCAGCTCAGGTCTGAGACCCGTG...CGGCAAATGTCCTCCCGCTGCCTTGCAGCCTGCACTTTGCACATGCTCACCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR TCA 90 bp TGCAGGAAAACCAGCTGCTCAGGACCCAGCCCTGGGCAGAGGGCACGGTCGGTGTCGATGGTGGCGTCTTaGAGCAGGGATCTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: CRKTSCSGPSPGQRARSVSMVAS*SRDLQR
Trigger: TCTCTGGAGATCCCTGCTTCAAGACGCCACCATCGA...CACCGACCGTGCCCTCTGCCCAGGGCTGGGTCCTGAGCAGCTGGTTTTCCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR GCA 90 bp AGGCCAGGCTTTCTGGCCTCTGGTTCCAGCCAGCATCAATTTGGTTGTGGCCAAGGTGCTCCCGCTCACTaGCCTCAGGGCCCTCCACGG +
Preference number: 4 (lower is better)
Translates to: RPGFLASGSSQHQFGCGQGAPAH*PQGPPR
Trigger: CCGTGGAGGGCCCTGAGGGCAGTGAGCGGGAGCACC...TTGGCCACAACCAAATTGATGCTGGCTGGAACCAGAGGCCAGAAAGCCTGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR GCA 90 bp TGGGAATTCACTGAGCTCAAGGGGACAAGAGGGCTGAGGACAGGGCTCCCACATTTCTCCGGGGGCCGGTaGTCCCGCTCACTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: WEFTELKGTRGLRTGLPHFSGGR*SRSLPS
Trigger: TGAGGGCAGTGAGCGGGAGCACCGGCCCCCGGAGAA...ATGTGGGAGCCCTGTCCTCAGCCCTCTTGTCCCCTTGAGCTCAGTGAATTCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR GCA 90 bp ACCAAAGCCAGTGCTCCTGGAGTGAGTGGGGACACAGGTAGAGAGGCCCCCTCATGGTGGCAAGCTGGATaGCGCTCAGCGTGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: TKASAPGVSGDTGREAPSWWQAG*RSAWQS
Trigger: GCTCTGCCACGCTGAGCGGCATCCAGCTTGCCACCA...TGAGGGGGCCTCTCTACCTGTGTCCCCACTCACTCCAGGAGCACTGGCTTTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR GCA 90 bp ACCAAAGCCAGTGCTCCTGGAGTGAGTGGGGACACAGGTAGAGAGGCCCCCTCAAGCAGCGCCGGTCCTTaGCAGCTCCTTCTTGCCCAC +
Preference number: 4 (lower is better)
Translates to: TKASAPGVSGDTGREAPSSSAGP*QLLLAH
Trigger: GTGGGCAAGAAGGAGCTGGCAAGGACCGGCGCTGCT...TGAGGGGGCCTCTCTACCTGTGTCCCCACTCACTCCAGGAGCACTGGCTTTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR GCA 90 bp AGGGCTCCCACATGGGGACAAGGCCAGGCTTTCTGGCCTCTGGTTCCAGCCAGCAGAGGGCACGGTCGGTaGTCAGACCTTTCTCAGCAC +
Preference number: 4 (lower is better)
Translates to: RAPTWGQGQAFWPLVPASRGHGR*SDLSQH
Trigger: GTGCTGAGAAAGGTCTGAGCACCGACCGTGCCCTCT...GCTGGCTGGAACCAGAGGCCAGAAAGCCTGGCCTTGTCCCCATGTGGGAGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR GCA 90 bp ACCAAAGCCAGTGCTCCTGGAGTGAGTGGGGACACAGGTAGAGAGGCCCCCTCAGGAGCCCTTCCCCCTTaGCCAGAACGGGGGATGCTT +
Preference number: 4 (lower is better)
Translates to: TKASAPGVSGDTGREAPSGALPP*PERGML
Trigger: AAGCATCCCCCGTTCTGGGCAAGGGGGAAGGGCTCC...TGAGGGGGCCTCTCTACCTGTGTCCCCACTCACTCCAGGAGCACTGGCTTTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR GCA 90 bp CCCTCAGCCACAGGCATCTCTACATTTAGGAGCCGCTGCATGTCCTCAGCCAGAGCAGCCAGAGCCCGATaGTGCGAGGCGCCGCTTGGA +
Preference number: 4 (lower is better)
Translates to: PSATGISTFRSRCMSSARAARAR*CEAPLG
Trigger: TCCAAGCGGCGCCTCGCAGCATCGGGCTCTGGCTGC...TCTGGCTGAGGACATGCAGCGGCTCCTAAATGTAGAGATGCCTGTGGCTGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373095.6
CDS-3UTR CCA 90 bp CCCTCAGCCACAGGCATCTCTACATTTAGGAGCCGCTGCATGTCCTCAGCCAGAGGCAGCAGCGCACCGTaGAGCCCGAGCCCGCAAACT +
Preference number: 4 (lower is better)
Translates to: PSATGISTFRSRCMSSARGSSAP*SPSPQT
Trigger: AGTTTGCGGGCTCGGGCTCCACGGTGCGCTGCTGCC...TCTGGCTGAGGACATGCAGCGGCTCCTAAATGTAGAGATGCCTGTGGCTGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp TGGGAATTCACTGAGCTCAAGGGGACAAGAGGGCTGAGGACAGGGCTCCCACATGGCAGCAGCGCACCGTaGAGCCCGAGCCCGCAAACT +
Preference number: 4 (lower is better)
Translates to: WEFTELKGTRGLRTGLPHGSSAP*SPSPQT
Trigger: AGTTTGCGGGCTCGGGCTCCACGGTGCGCTGCTGCC...ATGTGGGAGCCCTGTCCTCAGCCCTCTTGTCCCCTTGAGCTCAGTGAATTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp AGGAAGGCTGAGGCTTTTCTGGTAAGGAAGCCAGCTCCGGACCAGTCCAGCCACCAGAGGCGCTGCTGCTaGTGGACGTGTTGCGGCGGT +
Preference number: 4 (lower is better)
Translates to: RKAEAFLVRKPAPDQSSHQRRCC*WTCCGG
Trigger: ACCGCCGCAACACGTCCACCAGCAGCAGCGCCTCTG...GTGGCTGGACTGGTCCGGAGCTGGCTTCCTTACCAGAAAAGCCTCAGCCTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp AGGGCTCCCACATGGGGACAAGGCCAGGCTTTCTGGCCTCTGGTTCCAGCCAGCCAAAGCCAGTGCTCCTaGAGTGAGTGGGGACACAGG +
Preference number: 4 (lower is better)
Translates to: RAPTWGQGQAFWPLVPASQSQCS*SEWGHR
Trigger: CCTGTGTCCCCACTCACTCCAGGAGCACTGGCTTTG...GCTGGCTGGAACCAGAGGCCAGAAAGCCTGGCCTTGTCCCCATGTGGGAGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp GCAAGGGAACAACGGAGCAAGGCCCTGCTGCTAAGACGTGACCAAAGCCAGTGCGAGGTGAGGGGCCAGTaGGACTGTGCTGGGGGTGAG +
Preference number: 4 (lower is better)
Translates to: AREQRSKALLLRRDQSQCEVRGQ*DCAGGE
Trigger: CTCACCCCCAGCACAGTCCCACTGGCCCCTCACCTC...GCACTGGCTTTGGTCACGTCTTAGCAGCAGGGCCTTGCTCCGTTGTTCCCTTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp AGGAAGGCTGAGGCTTTTCTGGTAAGGAAGCCAGCTCCGGACCAGTCCAGCCACCGGGCTGCTGGACCCTaGGCCTCTGACTGCACAGCA +
Preference number: 4 (lower is better)
Translates to: RKAEAFLVRKPAPDQSSHRAAGP*ASDCTA
Trigger: TGCTGTGCAGTCAGAGGCCCAGGGTCCAGCAGCCCG...GTGGCTGGACTGGTCCGGAGCTGGCTTCCTTACCAGAAAAGCCTCAGCCTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp CCCTCTAGTGGTTCAGAGGAGAATATTCACAGTGGTGCCTGGGCCTTGGTGGGCGCCCAGGGCCTGGCGTaGGAGGATGTGGCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: PSSGSEENIHSGAWALVGAQGLA*EDVAGS
Trigger: AGAGCCTGCCACATCCTCCCACGCCAGGCCCTGGGC...GCCCACCAAGGCCCAGGCACCACTGTGAATATTCTCCTCTGAACCACTAGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp GCAAGGGAACAACGGAGCAAGGCCCTGCTGCTAAGACGTGACCAAAGCCAGTGCTCAGTCCAATCACCCTaGCCCAGGGCCTGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: AREQRSKALLLRRDQSQCSVQSP*PRAWRG
Trigger: CCCACGCCAGGCCCTGGGCCAGGGTGATTGGACTGA...GCACTGGCTTTGGTCACGTCTTAGCAGCAGGGCCTTGCTCCGTTGTTCCCTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp AGGGCTCCCACATGGGGACAAGGCCAGGCTTTCTGGCCTCTGGTTCCAGCCAGCGGACTTGGCAGTCGATaGTGGCGTCTTGAAGCAGGG +
Preference number: 4 (lower is better)
Translates to: RAPTWGQGQAFWPLVPASGLGSR*WRLEAG
Trigger: CCCTGCTTCAAGACGCCACCATCGACTGCCAAGTCC...GCTGGCTGGAACCAGAGGCCAGAAAGCCTGGCCTTGTCCCCATGTGGGAGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp TGCAGGAAAACCAGCTGCTCAGGACCCAGCCCTGGGCAGAGGGCACGGTCGGTGGGATGGAGATGGACTTaGCAGTCGATGGTGGCGTCT +
Preference number: 4 (lower is better)
Translates to: CRKTSCSGPSPGQRARSVGWRWT*QSMVAS
Trigger: AGACGCCACCATCGACTGCCAAGTCCATCTCCATCC...CACCGACCGTGCCCTCTGCCCAGGGCTGGGTCCTGAGCAGCTGGTTTTCCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp GGGGGTGAGCATGTGCAAAGTGCAGGCTGCAAGGCAGCGGGAGGACATTTGCCGGTAAACAGCAGGGCATaGCCCAGGAGGCAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: GGEHVQSAGCKAAGGHLPVNSRA*PRRQRQ
Trigger: CTGCCTCTGCCTCCTGGGCCATGCCCTGCTGTTTAC...CGGCAAATGTCCTCCCGCTGCCTTGCAGCCTGCACTTTGCACATGCTCACCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373095.6
CDS-3UTR TCA 90 bp CTGGCTGGCAGCCAGAACCCACCTTCAAGCAAGTTACAAGGACTTGGGGGAAAGGCGGTGCGTCAGGTCTaGGAGGCTGGAGGAGCGCGA +
Preference number: 4 (lower is better)
Translates to: LAGSQNPPSSKLQGLGGKAVRQV*EAGGAR
Trigger: TCGCGCTCCTCCAGCCTCTCAGACCTGACGCACCGC...CTTTCCCCCAAGTCCTTGTAACTTGCTTGAAGGTGGGTTCTGGCTGCCAGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR TCA 90 bp AGGGCTCCCACATGGGGACAAGGCCAGGCTTTCTGGCCTCTGGTTCCAGCCAGCGATGTGGCGCAGAGGTaGTCTGAAGGGGAAAGTTCC +
Preference number: 4 (lower is better)
Translates to: RAPTWGQGQAFWPLVPASDVAQR*SEGESS
Trigger: GGAACTTTCCCCTTCAGATCACCTCTGCGCCACATC...GCTGGCTGGAACCAGAGGCCAGAAAGCCTGGCCTTGTCCCCATGTGGGAGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR TCA 90 bp GCCAGGGAGTTCCAAGACCAAGAAGCCCAACTCTCACCAGCGGGGGCAGATGGGGGAGGGGCAATGGAATaGTGCTACGGGGAGTGTGGA +
Preference number: 4 (lower is better)
Translates to: AREFQDQEAQLSPAGADGGGAME*CYGECG
Trigger: TCCACACTCCCCGTAGCATCATTCCATTGCCCCTCC...CCCATCTGCCCCCGCTGGTGAGAGTTGGGCTTCTTGGTCTTGGAACTCCCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR TCA 90 bp TCTGGAGGAGTCTCCCCAACAGCGCCAAAGCTGGCTGTTTTCCACCCAAAGCCCAGGGACTCTCAGGGCTaGGCAGAGCCTTCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: SGGVSPTAPKLAVFHPKPRDSQG*AEPSPA
Trigger: CGCTGGAGAAGGCTCTGCTCAGCCCTGAGAGTCCCT...GGGCTTTGGGTGGAAAACAGCCAGCTTTGGCGCTGTTGGGGAGACTCCTCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR GCA 90 bp GGGGGTGAGCATGTGCAAAGTGCAGGCTGCAAGGCAGCGGGAGGACATTTGCCGCGTGACCAAAGCCAGTaGTCCTGGAGTGAGTGGGGA +
Preference number: 4 (lower is better)
Translates to: GGEHVQSAGCKAAGGHLPRDQSQ*SWSEWG
Trigger: TCCCCACTCACTCCAGGAGCACTGGCTTTGGTCACG...CGGCAAATGTCCTCCCGCTGCCTTGCAGCCTGCACTTTGCACATGCTCACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR GCA 90 bp GGGGGTGAGCATGTGCAAAGTGCAGGCTGCAAGGCAGCGGGAGGACATTTGCCGAGAGGGCACGGTCGGTaGTCAGACCTTTCTCAGCAC +
Preference number: 4 (lower is better)
Translates to: GGEHVQSAGCKAAGGHLPRGHGR*SDLSQH
Trigger: GTGCTGAGAAAGGTCTGAGCACCGACCGTGCCCTCT...CGGCAAATGTCCTCCCGCTGCCTTGCAGCCTGCACTTTGCACATGCTCACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp ACCAAAGCCAGTGCTCCTGGAGTGAGTGGGGACACAGGTAGAGAGGCCCCCTCATCAGGTCTGAGAGGCTaGAGGAGCGCGAGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: TKASAPGVSGDTGREAPSSGLRG*RSASAL
Trigger: CAGAGCACTCGCGCTCCTCCAGCCTCTCAGACCTGA...TGAGGGGGCCTCTCTACCTGTGTCCCCACTCACTCCAGGAGCACTGGCTTTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp AGGCCAGGCTTTCTGGCCTCTGGTTCCAGCCAGCATCAATTTGGTTGTGGCCAAAGGCGCTGCTGCTGGTaGACGTGTTGCGGCGGTGCG +
Preference number: 4 (lower is better)
Translates to: RPGFLASGSSQHQFGCGQRRCCW*TCCGGA
Trigger: CGCACCGCCGCAACACGTCCACCAGCAGCAGCGCCT...TTGGCCACAACCAAATTGATGCTGGCTGGAACCAGAGGCCAGAAAGCCTGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp TGCAGGAAAACCAGCTGCTCAGGACCCAGCCCTGGGCAGAGGGCACGGTCGGTGGGCATGGATGAGATGTaGCGCAGAGGTGATCTGAAG +
Preference number: 4 (lower is better)
Translates to: CRKTSCSGPSPGQRARSVGMDEM*RRGDLK
Trigger: CTTCAGATCACCTCTGCGCCACATCTCATCCATGCC...CACCGACCGTGCCCTCTGCCCAGGGCTGGGTCCTGAGCAGCTGGTTTTCCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp GGATGCTTCCAGAGGAAGGCTGAGGCTTTTCTGGTAAGGAAGCCAGCTCCGGACCCTCAGCCAGAGGGCTaGGTCAGTCTCCAGCAGCGC +
Preference number: 4 (lower is better)
Translates to: GCFQRKAEAFLVRKPAPDPQPEG*VSLQQR
Trigger: GCGCTGCTGGAGACTGACCCAGCCCTCTGGCTGAGG...GTCCGGAGCTGGCTTCCTTACCAGAAAAGCCTCAGCCTTCCTCTGGAAGCATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp GCCAGGGAGTTCCAAGACCAAGAAGCCCAACTCTCACCAGCGGGGGCAGATGGGCAAAGCCAGTGCTCCTaGAGTGAGTGGGGACACAGG +
Preference number: 4 (lower is better)
Translates to: AREFQDQEAQLSPAGADGQSQCS*SEWGHR
Trigger: CCTGTGTCCCCACTCACTCCAGGAGCACTGGCTTTG...CCCATCTGCCCCCGCTGGTGAGAGTTGGGCTTCTTGGTCTTGGAACTCCCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp GCCAGGGAGTTCCAAGACCAAGAAGCCCAACTCTCACCAGCGGGGGCAGATGGGGATCTGGAGTGTGGGTaGGGTCTGAGGTCATGGCTC +
Preference number: 4 (lower is better)
Translates to: AREFQDQEAQLSPAGADGDLECG*GLRSWL
Trigger: GAGCCATGACCTCAGACCCCACCCACACTCCAGATC...CCCATCTGCCCCCGCTGGTGAGAGTTGGGCTTCTTGGTCTTGGAACTCCCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp CCCTCAGCCACAGGCATCTCTACATTTAGGAGCCGCTGCATGTCCTCAGCCAGACGGGCTGCTGGACCCTaGGCCTCTGACTGCACAGCA +
Preference number: 4 (lower is better)
Translates to: PSATGISTFRSRCMSSARRAAGP*ASDCTA
Trigger: TGCTGTGCAGTCAGAGGCCCAGGGTCCAGCAGCCCG...TCTGGCTGAGGACATGCAGCGGCTCCTAAATGTAGAGATGCCTGTGGCTGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp GGGGGTGAGCATGTGCAAAGTGCAGGCTGCAAGGCAGCGGGAGGACATTTGCCGTGGCGTGGGAGGATGTaGCAGGCTCTGTCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: GGEHVQSAGCKAAGGHLPWRGRM*QALSPS
Trigger: AGAAGGAGACAGAGCCTGCCACATCCTCCCACGCCA...CGGCAAATGTCCTCCCGCTGCCTTGCAGCCTGCACTTTGCACATGCTCACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR TCA 90 bp ACCAAAGCCAGTGCTCCTGGAGTGAGTGGGGACACAGGTAGAGAGGCCCCCTCAGGAGGGGCAATGGAATaGTGCTACGGGGAGTGTGGA +
Preference number: 4 (lower is better)
Translates to: TKASAPGVSGDTGREAPSGGAME*CYGECG
Trigger: TCCACACTCCCCGTAGCATCATTCCATTGCCCCTCC...TGAGGGGGCCTCTCTACCTGTGTCCCCACTCACTCCAGGAGCACTGGCTTTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR TCA 90 bp AGGAAGGCTGAGGCTTTTCTGGTAAGGAAGCCAGCTCCGGACCAGTCCAGCCACCACGGGTCTCAGACCTaGGCTGGAGCTAACTGGAGG +
Preference number: 4 (lower is better)
Translates to: RKAEAFLVRKPAPDQSSHHGSQT*AGANWR
Trigger: CCTCCAGTTAGCTCCAGCTCAGGTCTGAGACCCGTG...GTGGCTGGACTGGTCCGGAGCTGGCTTCCTTACCAGAAAAGCCTCAGCCTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR TCA 90 bp CTGGTCTGGAGGAGTCTCCCCAACAGCGCCAAAGCTGGCTGTTTTCCACCCAAAAGGGACTCTCAGGGCTaGGCAGAGCCTTCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: LVWRSLPNSAKAGCFPPKRDSQG*AEPSPA
Trigger: CGCTGGAGAAGGCTCTGCTCAGCCCTGAGAGTCCCT...TTTGGGTGGAAAACAGCCAGCTTTGGCGCTGTTGGGGAGACTCCTCCAGACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR TCA 90 bp GCCAGGGAGTTCCAAGACCAAGAAGCCCAACTCTCACCAGCGGGGGCAGATGGGCTGGTGGGAATTCACTaGGCTCAAGGGGACAAGAGG +
Preference number: 4 (lower is better)
Translates to: AREFQDQEAQLSPAGADGLVGIH*AQGDKR
Trigger: CCTCTTGTCCCCTTGAGCTCAGTGAATTCCCACCAG...CCCATCTGCCCCCGCTGGTGAGAGTTGGGCTTCTTGGTCTTGGAACTCCCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR TCA 90 bp GCAAGGGAACAACGGAGCAAGGCCCTGCTGCTAAGACGTGACCAAAGCCAGTGCTTCCTCTGGCAGCCCTaGGCTGAGAATAGTGGGCCG +
Preference number: 4 (lower is better)
Translates to: AREQRSKALLLRRDQSQCFLWQP*AENSGP
Trigger: CGGCCCACTATTCTCAGCTCAGGGCTGCCAGAGGAA...GCACTGGCTTTGGTCACGTCTTAGCAGCAGGGCCTTGCTCCGTTGTTCCCTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR GCA 90 bp AGGGCTCCCACATGGGGACAAGGCCAGGCTTTCTGGCCTCTGGTTCCAGCCAGCGCCTCGACTGACTGTTaGATAACTGGGACCCAAGGA +
Preference number: 4 (lower is better)
Translates to: RAPTWGQGQAFWPLVPASASTDC*ITGTQG
Trigger: TCCTTGGGTCCCAGTTATGCAACAGTCAGTCGAGGC...GCTGGCTGGAACCAGAGGCCAGAAAGCCTGGCCTTGTCCCCATGTGGGAGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373084.8
CDS-3UTR GCA 90 bp GGATGCTTCCAGAGGAAGGCTGAGGCTTTTCTGGTAAGGAAGCCAGCTCCGGACGACGTGTTGCGGCGGTaGGTCAGGTCTGAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: GCFQRKAEAFLVRKPAPDDVLRR*VRSERL
Trigger: CAGCCTCTCAGACCTGACGCACCGCCGCAACACGTC...GTCCGGAGCTGGCTTCCTTACCAGAAAAGCCTCAGCCTTCCTCTGGAAGCATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR GCA 90 bp TGGGAATTCACTGAGCTCAAGGGGACAAGAGGGCTGAGGACAGGGCTCCCACATGACGTGTTGCGGCGGTaGGTCAGGTCTGAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: WEFTELKGTRGLRTGLPHDVLRR*VRSERL
Trigger: CAGCCTCTCAGACCTGACGCACCGCCGCAACACGTC...ATGTGGGAGCCCTGTCCTCAGCCCTCTTGTCCCCTTGAGCTCAGTGAATTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR GCA 90 bp TGGGAATTCACTGAGCTCAAGGGGACAAGAGGGCTGAGGACAGGGCTCCCACATTGCTGGTGGACGTGTTaGGGCGGTGCGTCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: WEFTELKGTRGLRTGLPHCWWTC*GGASGL
Trigger: CAGACCTGACGCACCGCCGCAACACGTCCACCAGCA...ATGTGGGAGCCCTGTCCTCAGCCCTCTTGTCCCCTTGAGCTCAGTGAATTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR GCA 90 bp TGGGAATTCACTGAGCTCAAGGGGACAAGAGGGCTGAGGACAGGGCTCCCACATCTGGCCTGCCTGGCCTaGCCTCTAGTGGTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: WEFTELKGTRGLRTGLPHLACLA*PLVVQR
Trigger: CCTCTGAACCACTAGAGGGCAGGCCAGGCAGGCCAG...ATGTGGGAGCCCTGTCCTCAGCCCTCTTGTCCCCTTGAGCTCAGTGAATTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR GCA 90 bp CTGGCTGGCAGCCAGAACCCACCTTCAAGCAAGTTACAAGGACTTGGGGGAAAGTTCTTGCCCACAAGCTaGACGGGCCCGCCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: LAGSQNPPSSKLQGLGGKFLPTS*TGPPGL
Trigger: CAGGCCAGGCGGGCCCGTGCAGCTTGTGGGCAAGAA...CTTTCCCCCAAGTCCTTGTAACTTGCTTGAAGGTGGGTTCTGGCTGCCAGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR GCA 90 bp CTGCCTGGCCTGCCCTCTAGTGGTTCAGAGGAGAATATTCACAGTGGTGCCTGGAGCAGCGCCGGTCCTTaGCAGCTCCTTCTTGCCCAC +
Preference number: 4 (lower is better)
Translates to: LPGLPSSGSEENIHSGAWSSAGP*QLLLAH
Trigger: GTGGGCAAGAAGGAGCTGGCAAGGACCGGCGCTGCT...CCAGGCACCACTGTGAATATTCTCCTCTGAACCACTAGAGGGCAGGCCAGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR GCA 90 bp CCCTCTAGTGGTTCAGAGGAGAATATTCACAGTGGTGCCTGGGCCTTGGTGGGCCCCTGGGCCTCTGACTaGACAGCAGGCAGTGACCAG +
Preference number: 4 (lower is better)
Translates to: PSSGSEENIHSGAWALVGPWASD*TAGSDQ
Trigger: CTGGTCACTGCCTGCTGTGCAGTCAGAGGCCCAGGG...GCCCACCAAGGCCCAGGCACCACTGTGAATATTCTCCTCTGAACCACTAGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR GCA 90 bp TGGGAATTCACTGAGCTCAAGGGGACAAGAGGGCTGAGGACAGGGCTCCCACATGGAGCCCTTCCCCCTTaGCCAGAACGGGGGATGCTT +
Preference number: 4 (lower is better)
Translates to: WEFTELKGTRGLRTGLPHGALPP*PERGML
Trigger: AAGCATCCCCCGTTCTGGGCAAGGGGGAAGGGCTCC...ATGTGGGAGCCCTGTCCTCAGCCCTCTTGTCCCCTTGAGCTCAGTGAATTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR GCA 90 bp TGCAGGAAAACCAGCTGCTCAGGACCCAGCCCTGGGCAGAGGGCACGGTCGGTGATGCTCTGTTCCCAATaGCAGGGAGTTCCAAGACCA +
Preference number: 4 (lower is better)
Translates to: CRKTSCSGPSPGQRARSVMLCSQ*QGVPRP
Trigger: TGGTCTTGGAACTCCCTGGCATTGGGAACAGAGCAT...CACCGACCGTGCCCTCTGCCCAGGGCTGGGTCCTGAGCAGCTGGTTTTCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR GCA 90 bp CCCTCAGCCACAGGCATCTCTACATTTAGGAGCCGCTGCATGTCCTCAGCCAGATGCTGCTGCCCCCACTaGTGGTCCCACCACCCTTAC +
Preference number: 4 (lower is better)
Translates to: PSATGISTFRSRCMSSARCCCPH*WSHHPY
Trigger: GTAAGGGTGGTGGGACCAGCAGTGGGGGCAGCAGCA...TCTGGCTGAGGACATGCAGCGGCTCCTAAATGTAGAGATGCCTGTGGCTGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR GCA 90 bp CTCCCCATCTTCTGGGGGCCAATTCGTCTGGACACTGTGCGGTCAGCTTCCTTTTCAGGGAGTTGGTGCTaGTGCCCCCACTGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: LPIFWGPIRLDTVRSASFSGSWC*CPHCWS
Trigger: GGACCAGCAGTGGGGGCAGCAGCACCAACTCCCTGA...AAAGGAAGCTGACCGCACAGTGTCCAGACGAATTGGCCCCCAGAAGATGGGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp GGATGCTTCCAGAGGAAGGCTGAGGCTTTTCTGGTAAGGAAGCCAGCTCCGGACGTGTGGGCTCCTGGCTaGCGGAAGCCCAGAAGGGTA +
Preference number: 4 (lower is better)
Translates to: GCFQRKAEAFLVRKPAPDVWAPG*RKPRRV
Trigger: TACCCTTCTGGGCTTCCGCCAGCCAGGAGCCCACAC...GTCCGGAGCTGGCTTCCTTACCAGAAAAGCCTCAGCCTTCCTCTGGAAGCATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373084.8
CDS-3UTR CCA 90 bp TGCAGGAAAACCAGCTGCTCAGGACCCAGCCCTGGGCAGAGGGCACGGTCGGTGAGGATGGAGTTGTCCTaGCGAGTGTTCTTCGTGTCA +
Preference number: 4 (lower is better)
Translates to: CRKTSCSGPSPGQRARSVRMELS*RVFFVS
Trigger: TGACACGAAGAACACTCGCCAGGACAACTCCATCCT...CACCGACCGTGCCCTCTGCCCAGGGCTGGGTCCTGAGCAGCTGGTTTTCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp TGGGAATTCACTGAGCTCAAGGGGACAAGAGGGCTGAGGACAGGGCTCCCACATGGGCTGGACAGGTTCTaGTCGGGTTCCTCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: WEFTELKGTRGLRTGLPHGLDRF*SGSSGS
Trigger: GCTGCCAGAGGAACCCGACCAGAACCTGTCCAGCCC...ATGTGGGAGCCCTGTCCTCAGCCCTCTTGTCCCCTTGAGCTCAGTGAATTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp GGATGCTTCCAGAGGAAGGCTGAGGCTTTTCTGGTAAGGAAGCCAGCTCCGGACCGGGAGTGGCCAGAGTaGAACACCTCCTCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: GCFQRKAEAFLVRKPAPDREWPE*NTSSGL
Trigger: CAGCCCTGAGGAGGTGTTCCACTCTGGCCACTCCCG...GTCCGGAGCTGGCTTCCTTACCAGAAAAGCCTCAGCCTTCCTCTGGAAGCATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp GCAAGGGAACAACGGAGCAAGGCCCTGCTGCTAAGACGTGACCAAAGCCAGTGCTCAGGTCTGAGAGGCTaGAGGAGCGCGAGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: AREQRSKALLLRRDQSQCSGLRG*RSASAL
Trigger: CAGAGCACTCGCGCTCCTCCAGCCTCTCAGACCTGA...GCACTGGCTTTGGTCACGTCTTAGCAGCAGGGCCTTGCTCCGTTGTTCCCTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp GGATGCTTCCAGAGGAAGGCTGAGGCTTTTCTGGTAAGGAAGCCAGCTCCGGACTCCACCCAGGTCGGGTaGCTCTCCACCGAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: GCFQRKAEAFLVRKPAPDSTQVG*LSTESF
Trigger: GAAGGACTCGGTGGAGAGCCACCCGACCTGGGTGGA...GTCCGGAGCTGGCTTCCTTACCAGAAAAGCCTCAGCCTTCCTCTGGAAGCATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp CCCTCAGCCACAGGCATCTCTACATTTAGGAGCCGCTGCATGTCCTCAGCCAGATCCACCCAGGTCGGGTaGCTCTCCACCGAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: PSATGISTFRSRCMSSARSTQVG*LSTESF
Trigger: GAAGGACTCGGTGGAGAGCCACCCGACCTGGGTGGA...TCTGGCTGAGGACATGCAGCGGCTCCTAAATGTAGAGATGCCTGTGGCTGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp ACCAAAGCCAGTGCTCCTGGAGTGAGTGGGGACACAGGTAGAGAGGCCCCCTCACGATCTTCTCCACGATaGCATCCGCATCGATCCGCG +
Preference number: 4 (lower is better)
Translates to: TKASAPGVSGDTGREAPSRSSPR*HPHRSA
Trigger: CGCGGATCGATGCGGATGCCATCGTGGAGAAGATCG...TGAGGGGGCCTCTCTACCTGTGTCCCCACTCACTCCAGGAGCACTGGCTTTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp TGCAGGAAAACCAGCTGCTCAGGACCCAGCCCTGGGCAGAGGGCACGGTCGGTGCCATCTGTGAAATCCTaGCTCTGCACGATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: CRKTSCSGPSPGQRARSVPSVKS*LCTIFS
Trigger: GGAGAAGATCGTGCAGAGCCAGGATTTCACAGATGG...CACCGACCGTGCCCTCTGCCCAGGGCTGGGTCCTGAGCAGCTGGTTTTCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp CTGGTCTGGAGGAGTCTCCCCAACAGCGCCAAAGCTGGCTGTTTTCCACCCAAAACCCTGGTGGCAAGCTaGATGCCGCTCAGCGTGGCA +
Preference number: 4 (lower is better)
Translates to: LVWRSLPNSAKAGCFPPKTLVAS*MPLSVA
Trigger: TGCCACGCTGAGCGGCATCCAGCTTGCCACCAGGGT...TTTGGGTGGAAAACAGCCAGCTTTGGCGCTGTTGGGGAGACTCCTCCAGACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp CTCCCCATCTTCTGGGGGCCAATTCGTCTGGACACTGTGCGGTCAGCTTCCTTTCCCCAGAAGAGACCCTaGTGGCAAGCTGGATGCCGC +
Preference number: 4 (lower is better)
Translates to: LPIFWGPIRLDTVRSASFPQKRP*WQAGCR
Trigger: GCGGCATCCAGCTTGCCACCAGGGTCTCTTCTGGGG...AAAGGAAGCTGACCGCACAGTGTCCAGACGAATTGGCCCCCAGAAGATGGGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp GGATGCTTCCAGAGGAAGGCTGAGGCTTTTCTGGTAAGGAAGCCAGCTCCGGACCCCCAGAAGAGACCCTaGTGGCAAGCTGGATGCCGC +
Preference number: 4 (lower is better)
Translates to: GCFQRKAEAFLVRKPAPDPQKRP*WQAGCR
Trigger: GCGGCATCCAGCTTGCCACCAGGGTCTCTTCTGGGG...GTCCGGAGCTGGCTTCCTTACCAGAAAAGCCTCAGCCTTCCTCTGGAAGCATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp CCCACTGGGAAAGCACACCCCTTAAAGGAGCCCTTCCCCCTTGCCCAGAACGGGGGATGGGAGGGGCAATaGAATGATGCTACGGGGAGT +
Preference number: 4 (lower is better)
Translates to: PTGKAHPLKEPFPLAQNGGWEGQ*NDATGS
Trigger: ACTCCCCGTAGCATCATTCCATTGCCCCTCCCATCC...CCCGTTCTGGGCAAGGGGGAAGGGCTCCTTTAAGGGGTGTGCTTTCCCAGTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp CCCACTGGGAAAGCACACCCCTTAAAGGAGCCCTTCCCCCTTGCCCAGAACGGGGGGTCCCAGCATGGATaGGAGGGGCAATGGAATGAT +
Preference number: 4 (lower is better)
Translates to: PTGKAHPLKEPFPLAQNGGSQHG*EGQWND
Trigger: ATCATTCCATTGCCCCTCCCATCCATGCTGGGACCC...CCCGTTCTGGGCAAGGGGGAAGGGCTCCTTTAAGGGGTGTGCTTTCCCAGTGGG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp CTGGTCTGGAGGAGTCTCCCCAACAGCGCCAAAGCTGGCTGTTTTCCACCCAAATGGGGTCTGAGGTCATaGCTCCCAGGAAGAGGCCGC +
Preference number: 4 (lower is better)
Translates to: LVWRSLPNSAKAGCFPPKWGLRS*LPGRGR
Trigger: GCGGCCTCTTCCTGGGAGCCATGACCTCAGACCCCA...TTTGGGTGGAAAACAGCCAGCTTTGGCGCTGTTGGGGAGACTCCTCCAGACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp ACCAAAGCCAGTGCTCCTGGAGTGAGTGGGGACACAGGTAGAGAGGCCCCCTCAGATCTGGAGTGTGGGTaGGGTCTGAGGTCATGGCTC +
Preference number: 4 (lower is better)
Translates to: TKASAPGVSGDTGREAPSDLECG*GLRSWL
Trigger: GAGCCATGACCTCAGACCCCACCCACACTCCAGATC...TGAGGGGGCCTCTCTACCTGTGTCCCCACTCACTCCAGGAGCACTGGCTTTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp CCCACATGGGGACAAGGCCAGGCTTTCTGGCCTCTGGTTCCAGCCAGCATCAATACCTCCCTCCTAGGCTaGGTGAGGTCACGCAGACAC +
Preference number: 4 (lower is better)
Translates to: PTWGQGQAFWPLVPASINTSLLG*VRSRRH
Trigger: GTGTCTGCGTGACCTCACCCAGCCTAGGAGGGAGGT...ATTGATGCTGGCTGGAACCAGAGGCCAGAAAGCCTGGCCTTGTCCCCATGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp AGGAAGGCTGAGGCTTTTCTGGTAAGGAAGCCAGCTCCGGACCAGTCCAGCCACCTGGGGTTCCTGGTCTaGAGGAGTCTCCCCAACAGC +
Preference number: 4 (lower is better)
Translates to: RKAEAFLVRKPAPDQSSHLGFLV*RSLPNS
Trigger: GCTGTTGGGGAGACTCCTCCAGACCAGGAACCCCAG...GTGGCTGGACTGGTCCGGAGCTGGCTTCCTTACCAGAAAAGCCTCAGCCTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp GGGGGTGAGCATGTGCAAAGTGCAGGCTGCAAGGCAGCGGGAGGACATTTGCCGGCTGTGGGCACCTGGTaGGAATTCACTGAGCTCAAG +
Preference number: 4 (lower is better)
Translates to: GGEHVQSAGCKAAGGHLPAVGTW*EFTELK
Trigger: CTTGAGCTCAGTGAATTCCCACCAGGTGCCCACAGC...CGGCAAATGTCCTCCCGCTGCCTTGCAGCCTGCACTTTGCACATGCTCACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp GCCAGGGAGTTCCAAGACCAAGAAGCCCAACTCTCACCAGCGGGGGCAGATGGGGAAGTCCAGGAGCTGTaGGCACCTGGTGGGAATTCA +
Preference number: 4 (lower is better)
Translates to: AREFQDQEAQLSPAGADGEVQEL*APGGNS
Trigger: TGAATTCCCACCAGGTGCCCACAGCTCCTGGACTTC...CCCATCTGCCCCCGCTGGTGAGAGTTGGGCTTCTTGGTCTTGGAACTCCCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp ACCAAAGCCAGTGCTCCTGGAGTGAGTGGGGACACAGGTAGAGAGGCCCCCTCAGGAGGAATCCTGGCCTaGGATGGAGATGGACTTGGC +
Preference number: 4 (lower is better)
Translates to: TKASAPGVSGDTGREAPSGGILA*DGDGLG
Trigger: GCCAAGTCCATCTCCATCCCAGGCCAGGATTCCTCC...TGAGGGGGCCTCTCTACCTGTGTCCCCACTCACTCCAGGAGCACTGGCTTTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp CCCTCTAGTGGTTCAGAGGAGAATATTCACAGTGGTGCCTGGGCCTTGGTGGGCACCCAGTCAGGGAGTTaGTGCTGCTGCCCCCACTGC +
Preference number: 4 (lower is better)
Translates to: PSSGSEENIHSGAWALVGTQSGS*CCCPHC
Trigger: GCAGTGGGGGCAGCAGCACCAACTCCCTGACTGGGT...GCCCACCAAGGCCCAGGCACCACTGTGAATATTCTCCTCTGAACCACTAGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp CCCACTGGGAAAGCACACCCCTTAAAGGAGCCCTTCCCCCTTGCCCAGAACGGGCAGCGAAGCCCAGCTTaGAATAAGCCTTCCCGCCTT +
Preference number: 4 (lower is better)
Translates to: PTGKAHPLKEPFPLAQNGQRSPA*NKPSRL
Trigger: AAGGCGGGAAGGCTTATTCCAAGCTGGGCTTCGCTG...CCCGTTCTGGGCAAGGGGGAAGGGCTCCTTTAAGGGGTGTGCTTTCCCAGTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373095.6
CDS-3UTR TCA 90 bp TGCAGGAAAACCAGCTGCTCAGGACCCAGCCCTGGGCAGAGGGCACGGTCGGTGAAGTTCCTCATGGAATaGTACAGGTCTGGACTCCAG +
Preference number: 4 (lower is better)
Translates to: CRKTSCSGPSPGQRARSVKFLME*YRSGLQ
Trigger: CTGGAGTCCAGACCTGTATCATTCCATGAGGAACTT...CACCGACCGTGCCCTCTGCCCAGGGCTGGGTCCTGAGCAGCTGGTTTTCCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR TCA 90 bp CCCTCTAGTGGTTCAGAGGAGAATATTCACAGTGGTGCCTGGGCCTTGGTGGGCGGACTGTGCTGGGGGTaGGCATGTGCAAAGTGCAGG +
Preference number: 4 (lower is better)
Translates to: PSSGSEENIHSGAWALVGGLCWG*ACAKCR
Trigger: CCTGCACTTTGCACATGCTCACCCCCAGCACAGTCC...GCCCACCAAGGCCCAGGCACCACTGTGAATATTCTCCTCTGAACCACTAGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR TCA 90 bp GGATGCTTCCAGAGGAAGGCTGAGGCTTTTCTGGTAAGGAAGCCAGCTCCGGACTTCCTCTGGCAGCCCTaGGCTGAGAATAGTGGGCCG +
Preference number: 4 (lower is better)
Translates to: GCFQRKAEAFLVRKPAPDFLWQP*AENSGP
Trigger: CGGCCCACTATTCTCAGCTCAGGGCTGCCAGAGGAA...GTCCGGAGCTGGCTTCCTTACCAGAAAAGCCTCAGCCTTCCTCTGGAAGCATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR TCA 90 bp GCCAGGGAGTTCCAAGACCAAGAAGCCCAACTCTCACCAGCGGGGGCAGATGGGTCTTACACACGAAGGTaGACCTCTTTCGCCACCGCA +
Preference number: 4 (lower is better)
Translates to: AREFQDQEAQLSPAGADGSYTRR*TSFATA
Trigger: TGCGGTGGCGAAAGAGGTTCACCTTCGTGTGTAAGA...CCCATCTGCCCCCGCTGGTGAGAGTTGGGCTTCTTGGTCTTGGAACTCCCTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373095.6
CDS-3UTR GCA 90 bp TCTGGAGGAGTCTCCCCAACAGCGCCAAAGCTGGCTGTTTTCCACCCAAAGCCCAGCGCGAGTGCTCTGTaGTGTAGCCGGAGATCTTGG +
Preference number: 4 (lower is better)
Translates to: SGGVSPTAPKLAVFHPKPSASAL*CSRRSW
Trigger: CCAAGATCTCCGGCTACAGCACAGAGCACTCGCGCT...GGGCTTTGGGTGGAAAACAGCCAGCTTTGGCGCTGTTGGGGAGACTCCTCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR GCA 90 bp AGGAAGGCTGAGGCTTTTCTGGTAAGGAAGCCAGCTCCGGACCAGTCCAGCCACAGCGCGAGTGCTCTGTaGTGTAGCCGGAGATCTTGG +
Preference number: 4 (lower is better)
Translates to: RKAEAFLVRKPAPDQSSHSASAL*CSRRSW
Trigger: CCAAGATCTCCGGCTACAGCACAGAGCACTCGCGCT...GTGGCTGGACTGGTCCGGAGCTGGCTTCCTTACCAGAAAAGCCTCAGCCTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR GCA 90 bp AGGCCAGGCTTTCTGGCCTCTGGTTCCAGCCAGCATCAATTTGGTTGTGGCCAATGCTGGTGGACGTGTTaGGGCGGTGCGTCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: RPGFLASGSSQHQFGCGQCWWTC*GGASGL
Trigger: CAGACCTGACGCACCGCCGCAACACGTCCACCAGCA...TTGGCCACAACCAAATTGATGCTGGCTGGAACCAGAGGCCAGAAAGCCTGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR GCA 90 bp AGGCCAGGCTTTCTGGCCTCTGGTTCCAGCCAGCATCAATTTGGTTGTGGCCAATGGTGGCAAGCTGGATaGCGCTCAGCGTGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: RPGFLASGSSQHQFGCGQWWQAG*RSAWQS
Trigger: GCTCTGCCACGCTGAGCGGCATCCAGCTTGCCACCA...TTGGCCACAACCAAATTGATGCTGGCTGGAACCAGAGGCCAGAAAGCCTGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR GCA 90 bp ACCAAAGCCAGTGCTCCTGGAGTGAGTGGGGACACAGGTAGAGAGGCCCCCTCAGAATATTCACAGTGGTaGCTGGGCCTTGGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: TKASAPGVSGDTGREAPSEYSQW*LGLGGP
Trigger: TGGCCCACCAAGGCCCAGGCACCACTGTGAATATTC...TGAGGGGGCCTCTCTACCTGTGTCCCCACTCACTCCAGGAGCACTGGCTTTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR GCA 90 bp ACCAAAGCCAGTGCTCCTGGAGTGAGTGGGGACACAGGTAGAGAGGCCCCCTCAACATTTAGGAGCCGCTaGATGTCCTCAGCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: TKASAPGVSGDTGREAPSTFRSR*MSSARG
Trigger: CCCTCTGGCTGAGGACATGCAGCGGCTCCTAAATGT...TGAGGGGGCCTCTCTACCTGTGTCCCCACTCACTCCAGGAGCACTGGCTTTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR GCA 90 bp CCCACTGGGAAAGCACACCCCTTAAAGGAGCCCTTCCCCCTTGCCCAGAACGGGGGCAGAGAAGGACTTTaGTTGCTCCAACCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: PTGKAHPLKEPFPLAQNGGREGL*LLQPSC
Trigger: GCAGGAAGGTTGGAGCAAGCAAAGTCCTTCTCTGCC...CCCGTTCTGGGCAAGGGGGAAGGGCTCCTTTAAGGGGTGTGCTTTCCCAGTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR GCA 90 bp CCCTCTAGTGGTTCAGAGGAGAATATTCACAGTGGTGCCTGGGCCTTGGTGGGCGCCCAGAACGGGGGATaGTTCCAGAGGAAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: PSSGSEENIHSGAWALVGAQNGG*FQRKAE
Trigger: CTCAGCCTTCCTCTGGAAGCATCCCCCGTTCTGGGC...GCCCACCAAGGCCCAGGCACCACTGTGAATATTCTCCTCTGAACCACTAGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp AGGAAGGCTGAGGCTTTTCTGGTAAGGAAGCCAGCTCCGGACCAGTCCAGCCACCAGAAGAGACCCTGGTaGCAAGCTGGATGCCGCTCA +
Preference number: 4 (lower is better)
Translates to: RKAEAFLVRKPAPDQSSHQKRPW*QAGCRS
Trigger: TGAGCGGCATCCAGCTTGCCACCAGGGTCTCTTCTG...GTGGCTGGACTGGTCCGGAGCTGGCTTCCTTACCAGAAAAGCCTCAGCCTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp GGGGGTGAGCATGTGCAAAGTGCAGGCTGCAAGGCAGCGGGAGGACATTTGCCGCAGACTGCTCCCCACTaGGAAAGCACACCCCTTAAA +
Preference number: 4 (lower is better)
Translates to: GGEHVQSAGCKAAGGHLPQTAPH*ESTPLK
Trigger: TTTAAGGGGTGTGCTTTCCCAGTGGGGAGCAGTCTG...CGGCAAATGTCCTCCCGCTGCCTTGCAGCCTGCACTTTGCACATGCTCACCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp GGATGCTTCCAGAGGAAGGCTGAGGCTTTTCTGGTAAGGAAGCCAGCTCCGGACGAACCAGCCGGCAGGTaGGGCAGAAAAGCAGCACCT +
Preference number: 4 (lower is better)
Translates to: GCFQRKAEAFLVRKPAPDEPAGR*GRKAAP
Trigger: AGGTGCTGCTTTTCTGCCCCACCTGCCGGCTGGTTC...GTCCGGAGCTGGCTTCCTTACCAGAAAAGCCTCAGCCTTCCTCTGGAAGCATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp GGGACTGGCTGGCAGCCAGAACCCACCTTCAAGCAAGTTACAAGGACTTGGGGGGGGGGCCAATTCGTCTaGACACTGTGCGGTCAGCTT +
Preference number: 4 (lower is better)
Translates to: GTGWQPEPTFKQVTRTWGGGQFV*TLCGQL
Trigger: AAGCTGACCGCACAGTGTCCAGACGAATTGGCCCCC...CCCCCAAGTCCTTGTAACTTGCTTGAAGGTGGGTTCTGGCTGCCAGCCAGTCCC
59% GC, longest homopolymer 10 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp GCCAGGGAGTTCCAAGACCAAGAAGCCCAACTCTCACCAGCGGGGGCAGATGGGCAACAGCGCCAAAGCTaGCTGTTTTCCACCCAAAGC +
Preference number: 4 (lower is better)
Translates to: AREFQDQEAQLSPAGADGQQRQS*LFSTQS
Trigger: GCTTTGGGTGGAAAACAGCCAGCTTTGGCGCTGTTG...CCCATCTGCCCCCGCTGGTGAGAGTTGGGCTTCTTGGTCTTGGAACTCCCTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp CCCACATGGGGACAAGGCCAGGCTTTCTGGCCTCTGGTTCCAGCCAGCATCAATTCCTTCTGGGGTTCCTaGTCTGGAGGAGTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: PTWGQGQAFWPLVPASINSFWGS*SGGVSP
Trigger: TGGGGAGACTCCTCCAGACCAGGAACCCCAGAAGGA...ATTGATGCTGGCTGGAACCAGAGGCCAGAAAGCCTGGCCTTGTCCCCATGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp TCTGGAGGAGTCTCCCCAACAGCGCCAAAGCTGGCTGTTTTCCACCCAAAGCCCGGCCTGGGATGGAGATaGACTTGGCAGTCGATGGTG +
Preference number: 4 (lower is better)
Translates to: SGGVSPTAPKLAVFHPKPGLGWR*TWQSMV
Trigger: CACCATCGACTGCCAAGTCCATCTCCATCCCAGGCC...GGGCTTTGGGTGGAAAACAGCCAGCTTTGGCGCTGTTGGGGAGACTCCTCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp AGGCCAGGCTTTCTGGCCTCTGGTTCCAGCCAGCATCAATTTGGTTGTGGCCAAACCCAGTCAGGGAGTTaGTGCTGCTGCCCCCACTGC +
Preference number: 4 (lower is better)
Translates to: RPGFLASGSSQHQFGCGQTQSGS*CCCPHC
Trigger: GCAGTGGGGGCAGCAGCACCAACTCCCTGACTGGGT...TTGGCCACAACCAAATTGATGCTGGCTGGAACCAGAGGCCAGAAAGCCTGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR TCA 90 bp ACCAAAGCCAGTGCTCCTGGAGTGAGTGGGGACACAGGTAGAGAGGCCCCCTCATGTTGCTGCCATCTGTaGAATCCTGGCTCTGCACGA +
Preference number: 4 (lower is better)
Translates to: TKASAPGVSGDTGREAPSCCCHL*NPGSAR
Trigger: TCGTGCAGAGCCAGGATTTCACAGATGGCAGCAACA...TGAGGGGGCCTCTCTACCTGTGTCCCCACTCACTCCAGGAGCACTGGCTTTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR TCA 90 bp TGCCTGGCCTGCCCTCTAGTGGTTCAGAGGAGAATATTCACAGTGGTGCCTGGGCCTGCTGCTAAGACGTaGCCAAAGCCAGTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: CLACPLVVQRRIFTVVPGPAAKT*PKPVLL
Trigger: CAGGAGCACTGGCTTTGGTCACGTCTTAGCAGCAGG...CCCAGGCACCACTGTGAATATTCTCCTCTGAACCACTAGAGGGCAGGCCAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR TCA 90 bp TGGGAATTCACTGAGCTCAAGGGGACAAGAGGGCTGAGGACAGGGCTCCCACATCCTGCTGCTAAGACGTaGCCAAAGCCAGTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: WEFTELKGTRGLRTGLPHPAAKT*PKPVLL
Trigger: CAGGAGCACTGGCTTTGGTCACGTCTTAGCAGCAGG...ATGTGGGAGCCCTGTCCTCAGCCCTCTTGTCCCCTTGAGCTCAGTGAATTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR TCA 90 bp CTGGCTGGCAGCCAGAACCCACCTTCAAGCAAGTTACAAGGACTTGGGGGAAAGGGACTGTGCTGGGGGTaGGCATGTGCAAAGTGCAGG +
Preference number: 4 (lower is better)
Translates to: LAGSQNPPSSKLQGLGGKGLCWG*ACAKCR
Trigger: CCTGCACTTTGCACATGCTCACCCCCAGCACAGTCC...CTTTCCCCCAAGTCCTTGTAACTTGCTTGAAGGTGGGTTCTGGCTGCCAGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR TCA 90 bp GGGGGTGAGCATGTGCAAAGTGCAGGCTGCAAGGCAGCGGGAGGACATTTGCCGCTTCCAGAGGAAGGCTaGGGCTTTTCTGGTAAGGAA +
Preference number: 4 (lower is better)
Translates to: GGEHVQSAGCKAAGGHLPLPEEG*GFSGKE
Trigger: TTCCTTACCAGAAAAGCCTCAGCCTTCCTCTGGAAG...CGGCAAATGTCCTCCCGCTGCCTTGCAGCCTGCACTTTGCACATGCTCACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR TCA 90 bp CCCACTGGGAAAGCACACCCCTTAAAGGAGCCCTTCCCCCTTGCCCAGAACGGGCTTCCAGAGGAAGGCTaGGGCTTTTCTGGTAAGGAA +
Preference number: 4 (lower is better)
Translates to: PTGKAHPLKEPFPLAQNGLPEEG*GFSGKE
Trigger: TTCCTTACCAGAAAAGCCTCAGCCTTCCTCTGGAAG...CCCGTTCTGGGCAAGGGGGAAGGGCTCCTTTAAGGGGTGTGCTTTCCCAGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR TCA 90 bp AAAGTTCCTCATGGAATGATACAGGTCTGGACTCCAGAGAAAGCAGGACTCTTCAGCCGGATCCCGCCCTaGTGGTGGCGGAGACGGCGG +
Preference number: 4 (lower is better)
Translates to: KVPHGMIQVWTPEKAGLFSRIPP*WWRRRR
Trigger: CCGCCGTCTCCGCCACCATCAGGGCGGGATCCGGCT...GAAGAGTCCTGCTTTCTCTGGAGTCCAGACCTGTATCATTCCATGAGGAACTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373095.6
CDS-3UTR GCA 90 bp CCCTCTAGTGGTTCAGAGGAGAATATTCACAGTGGTGCCTGGGCCTTGGTGGGCTGGCATAGCTGGAGTTaGGGGAGTGGCCAGAGTGGA +
Preference number: 4 (lower is better)
Translates to: PSSGSEENIHSGAWALVGWHSWS*GSGQSG
Trigger: TCCACTCTGGCCACTCCCGCAACTCCAGCTATGCCA...GCCCACCAAGGCCCAGGCACCACTGTGAATATTCTCCTCTGAACCACTAGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR GCA 90 bp GGGGGTGAGCATGTGCAAAGTGCAGGCTGCAAGGCAGCGGGAGGACATTTGCCGGTGAAATCCTGGCTCTaGACGATCTTCTCCACGATG +
Preference number: 4 (lower is better)
Translates to: GGEHVQSAGCKAAGGHLPVKSWL*TIFSTM
Trigger: CATCGTGGAGAAGATCGTGCAGAGCCAGGATTTCAC...CGGCAAATGTCCTCCCGCTGCCTTGCAGCCTGCACTTTGCACATGCTCACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR GCA 90 bp CCCACTGGGAAAGCACACCCCTTAAAGGAGCCCTTCCCCCTTGCCCAGAACGGGGTGAAATCCTGGCTCTaGACGATCTTCTCCACGATG +
Preference number: 4 (lower is better)
Translates to: PTGKAHPLKEPFPLAQNGVKSWL*TIFSTM
Trigger: CATCGTGGAGAAGATCGTGCAGAGCCAGGATTTCAC...CCCGTTCTGGGCAAGGGGGAAGGGCTCCTTTAAGGGGTGTGCTTTCCCAGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR GCA 90 bp AGGAAGGCTGAGGCTTTTCTGGTAAGGAAGCCAGCTCCGGACCAGTCCAGCCACGAGTGTGGACTGGAGTaGATGGAGGAGGCATGGATG +
Preference number: 4 (lower is better)
Translates to: RKAEAFLVRKPAPDQSSHECGLE*MEEAWM
Trigger: CATCCATGCCTCCTCCATGCACTCCAGTCCACACTC...GTGGCTGGACTGGTCCGGAGCTGGCTTCCTTACCAGAAAAGCCTCAGCCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR GCA 90 bp AGGAAGGCTGAGGCTTTTCTGGTAAGGAAGCCAGCTCCGGACCAGTCCAGCCACACATTTAGGAGCCGCTaGATGTCCTCAGCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: RKAEAFLVRKPAPDQSSHTFRSR*MSSARG
Trigger: CCCTCTGGCTGAGGACATGCAGCGGCTCCTAAATGT...GTGGCTGGACTGGTCCGGAGCTGGCTTCCTTACCAGAAAAGCCTCAGCCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR GCA 90 bp GCCAGGGAGTTCCAAGACCAAGAAGCCCAACTCTCACCAGCGGGGGCAGATGGGATGCTCTGTTCCCAATaGCAGGGAGTTCCAAGACCA +
Preference number: 4 (lower is better)
Translates to: AREFQDQEAQLSPAGADGMLCSQ*QGVPRP
Trigger: TGGTCTTGGAACTCCCTGGCATTGGGAACAGAGCAT...CCCATCTGCCCCCGCTGGTGAGAGTTGGGCTTCTTGGTCTTGGAACTCCCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR GCA 90 bp TGGGAATTCACTGAGCTCAAGGGGACAAGAGGGCTGAGGACAGGGCTCCCACATCCCTTACACGTCAGCTaGAGGGAGGAATCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: WEFTELKGTRGLRTGLPHPLHVS*REESWP
Trigger: AGGCCAGGATTCCTCCCTGCAGCTGACGTGTAAGGG...ATGTGGGAGCCCTGTCCTCAGCCCTCTTGTCCCCTTGAGCTCAGTGAATTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR GCA 90 bp TGCCTGGCCTGCCCTCTAGTGGTTCAGAGGAGAATATTCACAGTGGTGCCTGGGCCCTTACACGTCAGCTaGAGGGAGGAATCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: CLACPLVVQRRIFTVVPGPLHVS*REESWP
Trigger: AGGCCAGGATTCCTCCCTGCAGCTGACGTGTAAGGG...CCCAGGCACCACTGTGAATATTCTCCTCTGAACCACTAGAGGGCAGGCCAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp TGCCTGGCCTGCCCTCTAGTGGTTCAGAGGAGAATATTCACAGTGGTGCCTGGGACACCTCCTCAGGGCTaGACAGGTTCTGGTCGGGTT +
Preference number: 4 (lower is better)
Translates to: CLACPLVVQRRIFTVVPGTPPQG*TGSGRV
Trigger: AACCCGACCAGAACCTGTCCAGCCCTGAGGAGGTGT...CCCAGGCACCACTGTGAATATTCTCCTCTGAACCACTAGAGGGCAGGCCAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp AGGCCAGGCTTTCTGGCCTCTGGTTCCAGCCAGCATCAATTTGGTTGTGGCCAACTGGAGTTGCGGGAGTaGCCAGAGTGGAACACCTCC +
Preference number: 4 (lower is better)
Translates to: RPGFLASGSSQHQFGCGQLELRE*PEWNTS
Trigger: GGAGGTGTTCCACTCTGGCCACTCCCGCAACTCCAG...TTGGCCACAACCAAATTGATGCTGGCTGGAACCAGAGGCCAGAAAGCCTGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp TGCCTGGCCTGCCCTCTAGTGGTTCAGAGGAGAATATTCACAGTGGTGCCTGGGCGATCTTCTCCACGATaGCATCCGCATCGATCCGCG +
Preference number: 4 (lower is better)
Translates to: CLACPLVVQRRIFTVVPGRSSPR*HPHRSA
Trigger: CGCGGATCGATGCGGATGCCATCGTGGAGAAGATCG...CCCAGGCACCACTGTGAATATTCTCCTCTGAACCACTAGAGGGCAGGCCAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp CTCCCCATCTTCTGGGGGCCAATTCGTCTGGACACTGTGCGGTCAGCTTCCTTTCAGAAGAGACCCTGGTaGCAAGCTGGATGCCGCTCA +
Preference number: 4 (lower is better)
Translates to: LPIFWGPIRLDTVRSASFQKRPW*QAGCRS
Trigger: TGAGCGGCATCCAGCTTGCCACCAGGGTCTCTTCTG...AAAGGAAGCTGACCGCACAGTGTCCAGACGAATTGGCCCCCAGAAGATGGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp AGGGCTCCCACATGGGGACAAGGCCAGGCTTTCTGGCCTCTGGTTCCAGCCAGCGCTTTCAATCACAACTaGCTCGTAGACCCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: RAPTWGQGQAFWPLVPASAFNHN*LVDPRR
Trigger: TCTTCTGGGGTCTACGAGCCAGTTGTGATTGAAAGC...GCTGGCTGGAACCAGAGGCCAGAAAGCCTGGCCTTGTCCCCATGTGGGAGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp GGGACTGGCTGGCAGCCAGAACCCACCTTCAAGCAAGTTACAAGGACTTGGGGGGGATGGGAGGGGCAATaGAATGATGCTACGGGGAGT +
Preference number: 4 (lower is better)
Translates to: GTGWQPEPTFKQVTRTWGGWEGQ*NDATGS
Trigger: ACTCCCCGTAGCATCATTCCATTGCCCCTCCCATCC...CCCCCAAGTCCTTGTAACTTGCTTGAAGGTGGGTTCTGGCTGCCAGCCAGTCCC
58% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp AGGAAGGCTGAGGCTTTTCTGGTAAGGAAGCCAGCTCCGGACCAGTCCAGCCACTCAGACAGTCACAGGTaGCAGGATTCCGGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: RKAEAFLVRKPAPDQSSHSDSHR*QDSGGG
Trigger: ACCACCTCCGGAATCCTGCCACCTGTGACTGTCTGA...GTGGCTGGACTGGTCCGGAGCTGGCTTCCTTACCAGAAAAGCCTCAGCCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp CCCTCTAGTGGTTCAGAGGAGAATATTCACAGTGGTGCCTGGGCCTTGGTGGGCGTGACCAGGAGTCCTTaGGAAGGAGCTCAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: PSSGSEENIHSGAWALVGVTRSP*EGAQGR
Trigger: CCTTCCCTGAGCTCCTTCCCAAGGACTCCTGGTCAC...GCCCACCAAGGCCCAGGCACCACTGTGAATATTCTCCTCTGAACCACTAGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp GCAAGGGAACAACGGAGCAAGGCCCTGCTGCTAAGACGTGACCAAAGCCAGTGCAAGTGCCAGTATCGGTaGGGCAGGAAGGGACTCTCA +
Preference number: 4 (lower is better)
Translates to: AREQRSKALLLRRDQSQCKCQYR*GRKGLS
Trigger: TGAGAGTCCCTTCCTGCCCCACCGATACTGGCACTT...GCACTGGCTTTGGTCACGTCTTAGCAGCAGGGCCTTGCTCCGTTGTTCCCTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp GGGACTGGCTGGCAGCCAGAACCCACCTTCAAGCAAGTTACAAGGACTTGGGGGAAGTGCCAGTATCGGTaGGGCAGGAAGGGACTCTCA +
Preference number: 4 (lower is better)
Translates to: GTGWQPEPTFKQVTRTWGKCQYR*GRKGLS
Trigger: TGAGAGTCCCTTCCTGCCCCACCGATACTGGCACTT...CCCCCAAGTCCTTGTAACTTGCTTGAAGGTGGGTTCTGGCTGCCAGCCAGTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp GGATGCTTCCAGAGGAAGGCTGAGGCTTTTCTGGTAAGGAAGCCAGCTCCGGACGGGGGCCAATTCGTCTaGACACTGTGCGGTCAGCTT +
Preference number: 4 (lower is better)
Translates to: GCFQRKAEAFLVRKPAPDGGQFV*TLCGQL
Trigger: AAGCTGACCGCACAGTGTCCAGACGAATTGGCCCCC...GTCCGGAGCTGGCTTCCTTACCAGAAAAGCCTCAGCCTTCCTCTGGAAGCATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp TGGGAATTCACTGAGCTCAAGGGGACAAGAGGGCTGAGGACAGGGCTCCCACATTCCTTCTGGGGTTCCTaGTCTGGAGGAGTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: WEFTELKGTRGLRTGLPHSFWGS*SGGVSP
Trigger: TGGGGAGACTCCTCCAGACCAGGAACCCCAGAAGGA...ATGTGGGAGCCCTGTCCTCAGCCCTCTTGTCCCCTTGAGCTCAGTGAATTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp CTGGCTGGCAGCCAGAACCCACCTTCAAGCAAGTTACAAGGACTTGGGGGAAAGCAAGGCCAGGCTTTCTaGCCTCTGGTTCCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: LAGSQNPPSSKLQGLGGKQGQAF*PLVPAS
Trigger: GCTGGCTGGAACCAGAGGCCAGAAAGCCTGGCCTTG...CTTTCCCCCAAGTCCTTGTAACTTGCTTGAAGGTGGGTTCTGGCTGCCAGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp CTCCCCATCTTCTGGGGGCCAATTCGTCTGGACACTGTGCGGTCAGCTTCCTTTGGAGCTGTGGGCACCTaGTGGGAATTCACTGAGCTC +
Preference number: 4 (lower is better)
Translates to: LPIFWGPIRLDTVRSASFGAVGT*WEFTEL
Trigger: GAGCTCAGTGAATTCCCACCAGGTGCCCACAGCTCC...AAAGGAAGCTGACCGCACAGTGTCCAGACGAATTGGCCCCCAGAAGATGGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp CTGCCTGGCCTGCCCTCTAGTGGTTCAGAGGAGAATATTCACAGTGGTGCCTGGGGACTTGGCAGTCGATaGTGGCGTCTTGAAGCAGGG +
Preference number: 4 (lower is better)
Translates to: LPGLPSSGSEENIHSGAWGLGSR*WRLEAG
Trigger: CCCTGCTTCAAGACGCCACCATCGACTGCCAAGTCC...CCAGGCACCACTGTGAATATTCTCCTCTGAACCACTAGAGGGCAGGCCAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp CTGCCTGGCCTGCCCTCTAGTGGTTCAGAGGAGAATATTCACAGTGGTGCCTGGGGCCTGGGATGGAGATaGACTTGGCAGTCGATGGTG +
Preference number: 4 (lower is better)
Translates to: LPGLPSSGSEENIHSGAWGLGWR*TWQSMV
Trigger: CACCATCGACTGCCAAGTCCATCTCCATCCCAGGCC...CCAGGCACCACTGTGAATATTCTCCTCTGAACCACTAGAGGGCAGGCCAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp GCAAGGGAACAACGGAGCAAGGCCCTGCTGCTAAGACGTGACCAAAGCCAGTGCAATCCTGGCCTGGGATaGAGATGGACTTGGCAGTCG +
Preference number: 4 (lower is better)
Translates to: AREQRSKALLLRRDQSQCNPGLG*RWTWQS
Trigger: CGACTGCCAAGTCCATCTCCATCCCAGGCCAGGATT...GCACTGGCTTTGGTCACGTCTTAGCAGCAGGGCCTTGCTCCGTTGTTCCCTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp CCCTCTAGTGGTTCAGAGGAGAATATTCACAGTGGTGCCTGGGCCTTGGTGGGCTGCAGGGAGGAATCCTaGCCTGGGATGGAGATGGAC +
Preference number: 4 (lower is better)
Translates to: PSSGSEENIHSGAWALVGCREES*PGMEMD
Trigger: GTCCATCTCCATCCCAGGCCAGGATTCCTCCCTGCA...GCCCACCAAGGCCCAGGCACCACTGTGAATATTCTCCTCTGAACCACTAGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR TCA 90 bp AGGCCAGGCTTTCTGGCCTCTGGTTCCAGCCAGCATCAATTTGGTTGTGGCCAACCCCACAGCCTCGACTaGCTGTTGCATAACTGGGAC +
Preference number: 4 (lower is better)
Translates to: RPGFLASGSSQHQFGCGQPHSLD*LLHNWD
Trigger: GTCCCAGTTATGCAACAGTCAGTCGAGGCTGTGGGG...TTGGCCACAACCAAATTGATGCTGGCTGGAACCAGAGGCCAGAAAGCCTGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373084.8
CDS-3UTR TCA 90 bp CCCACATGGGGACAAGGCCAGGCTTTCTGGCCTCTGGTTCCAGCCAGCATCAATCAAGGAAGGGACAGCTaGAGCACTAAGCAGTCAGAC +
Preference number: 4 (lower is better)
Translates to: PTWGQGQAFWPLVPASINQGRDS*STKQSD
Trigger: GTCTGACTGCTTAGTGCTTCAGCTGTCCCTTCCTTG...ATTGATGCTGGCTGGAACCAGAGGCCAGAAAGCCTGGCCTTGTCCCCATGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR TCA 90 bp AGGGCTCCCACATGGGGACAAGGCCAGGCTTTCTGGCCTCTGGTTCCAGCCAGCGGCAATATTGAACCGTaGACTCAAGAAGAAAGACGG +
Preference number: 4 (lower is better)
Translates to: RAPTWGQGQAFWPLVPASGNIEP*TQEERR
Trigger: CCGTCTTTCTTCTTGAGTTCACGGTTCAATATTGCC...GCTGGCTGGAACCAGAGGCCAGAAAGCCTGGCCTTGTCCCCATGTGGGAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR TCA 90 bp CTGGTCTGGAGGAGTCTCCCCAACAGCGCCAAAGCTGGCTGTTTTCCACCCAAAGAGGCAAATCTACCCTaGATGCACCTCCCTCCTAGG +
Preference number: 4 (lower is better)
Translates to: LVWRSLPNSAKAGCFPPKEANLP*MHLPPR
Trigger: CCTAGGAGGGAGGTGCATTCAGGGTAGATTTGCCTC...TTTGGGTGGAAAACAGCCAGCTTTGGCGCTGTTGGGGAGACTCCTCCAGACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR TCA 90 bp CCCTCAGCCACAGGCATCTCTACATTTAGGAGCCGCTGCATGTCCTCAGCCAGACTGGTGGGAATTCACTaGGCTCAAGGGGACAAGAGG +
Preference number: 4 (lower is better)
Translates to: PSATGISTFRSRCMSSARLVGIH*AQGDKR
Trigger: CCTCTTGTCCCCTTGAGCTCAGTGAATTCCCACCAG...TCTGGCTGAGGACATGCAGCGGCTCCTAAATGTAGAGATGCCTGTGGCTGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR TCA 90 bp TGGGAATTCACTGAGCTCAAGGGGACAAGAGGGCTGAGGACAGGGCTCCCACATTCGATGGTGGCGTCTTaGAGCAGGGATCTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: WEFTELKGTRGLRTGLPHSMVAS*SRDLQR
Trigger: TCTCTGGAGATCCCTGCTTCAAGACGCCACCATCGA...ATGTGGGAGCCCTGTCCTCAGCCCTCTTGTCCCCTTGAGCTCAGTGAATTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR TCA 90 bp CAGAGGAGAACATGGACACCCTCCATCCTGATAGACATGCCATGTGGTCAGTTTCCGGGGCCCCAGGTCTaGGAGATCCACCAGTCCAGT +
Preference number: 4 (lower is better)
Translates to: QRRTWTPSILIDMPCGQFPGPQV*EIHQSS
Trigger: ACTGGACTGGTGGATCTCTCAGACCTGGGGCCCCGG...AAACTGACCACATGGCATGTCTATCAGGATGGAGGGTGTCCATGTTCTCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373095.6
CDS-3UTR TCA 90 bp ACCAAAGCCAGTGCTCCTGGAGTGAGTGGGGACACAGGTAGAGAGGCCCCCTCACTGTACCTCCTCCCTTaGCGACAAGCTGACAAAATC +
Preference number: 4 (lower is better)
Translates to: TKASAPGVSGDTGREAPSLYLLP*RQADKI
Trigger: GATTTTGTCAGCTTGTCGTCAAGGGAGGAGGTACAG...TGAGGGGGCCTCTCTACCTGTGTCCCCACTCACTCCAGGAGCACTGGCTTTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373095.6
CDS-3UTR GCA 90 bp CCCTCTAGTGGTTCAGAGGAGAATATTCACAGTGGTGCCTGGGCCTTGGTGGGCGAATATTCACAGTGGTaGCTGGGCCTTGGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: PSSGSEENIHSGAWALVGEYSQW*LGLGGP
Trigger: TGGCCCACCAAGGCCCAGGCACCACTGTGAATATTC...GCCCACCAAGGCCCAGGCACCACTGTGAATATTCTCCTCTGAACCACTAGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR GCA 90 bp TGGGAATTCACTGAGCTCAAGGGGACAAGAGGGCTGAGGACAGGGCTCCCACATCGCCTTTCAGCTCCTTaGGCACAGACACACGGAAGA +
Preference number: 4 (lower is better)
Translates to: WEFTELKGTRGLRTGLPHRLSAP*AQTHGR
Trigger: TCTTCCGTGTGTCTGTGCGCAAGGAGCTGAAAGGCG...ATGTGGGAGCCCTGTCCTCAGCCCTCTTGTCCCCTTGAGCTCAGTGAATTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373095.6
CDS-3UTR CCA 90 bp GGGGGTGAGCATGTGCAAAGTGCAGGCTGCAAGGCAGCGGGAGGACATTTGCCGACACCTGCTCCTCAATaGCTTTCAATCACAACTGGC +
Preference number: 4 (lower is better)
Translates to: GGEHVQSAGCKAAGGHLPTPAPQ*LSITTG
Trigger: GCCAGTTGTGATTGAAAGCCATTGAGGAGCAGGTGT...CGGCAAATGTCCTCCCGCTGCCTTGCAGCCTGCACTTTGCACATGCTCACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp CTGCCTGGCCTGCCCTCTAGTGGTTCAGAGGAGAATATTCACAGTGGTGCCTGGGGGTCCCAGCATGGATaGGAGGGGCAATGGAATGAT +
Preference number: 4 (lower is better)
Translates to: LPGLPSSGSEENIHSGAWGSQHG*EGQWND
Trigger: ATCATTCCATTGCCCCTCCCATCCATGCTGGGACCC...CCAGGCACCACTGTGAATATTCTCCTCTGAACCACTAGAGGGCAGGCCAGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp AACAAACACAGCCCACTCAAGCAGTGGTGGCAACATTCTGTTAGAAAGGAGGGGCCTCAGCCAGAGGGCTaGGTCAGTCTCCAGCAGCGC +
Preference number: 4 (lower is better)
Translates to: NKHSPLKQWWQHSVRKEGPQPEG*VSLQQR
Trigger: GCGCTGCTGGAGACTGACCCAGCCCTCTGGCTGAGG...CCCCTCCTTTCTAACAGAATGTTGCCACCACTGCTTGAGTGGGCTGTGTTTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373095.6
CDS-3UTR CCA 90 bp TGGGAATTCACTGAGCTCAAGGGGACAAGAGGGCTGAGGACAGGGCTCCCACATTCAGACAGTCACAGGTaGCAGGATTCCGGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: WEFTELKGTRGLRTGLPHSDSHR*QDSGGG
Trigger: ACCACCTCCGGAATCCTGCCACCTGTGACTGTCTGA...ATGTGGGAGCCCTGTCCTCAGCCCTCTTGTCCCCTTGAGCTCAGTGAATTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp TGGGAATTCACTGAGCTCAAGGGGACAAGAGGGCTGAGGACAGGGCTCCCACATGAACTCCCCATCTTCTaGGGGCCAATTCGTCTGGAC +
Preference number: 4 (lower is better)
Translates to: WEFTELKGTRGLRTGLPHELPIF*GPIRLD
Trigger: GTCCAGACGAATTGGCCCCCAGAAGATGGGGAGTTC...ATGTGGGAGCCCTGTCCTCAGCCCTCTTGTCCCCTTGAGCTCAGTGAATTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp CTGGCTGGCAGCCAGAACCCACCTTCAAGCAAGTTACAAGGACTTGGGGGAAAGTGGCGTGGGAGGATGTaGCAGGCTCTGTCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LAGSQNPPSSKLQGLGGKWRGRM*QALSPS
Trigger: AGAAGGAGACAGAGCCTGCCACATCCTCCCACGCCA...CTTTCCCCCAAGTCCTTGTAACTTGCTTGAAGGTGGGTTCTGGCTGCCAGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp CTGGTCTGGAGGAGTCTCCCCAACAGCGCCAAAGCTGGCTGTTTTCCACCCAAAGCTGTGGGCACCTGGTaGGAATTCACTGAGCTCAAG +
Preference number: 4 (lower is better)
Translates to: LVWRSLPNSAKAGCFPPKAVGTW*EFTELK
Trigger: CTTGAGCTCAGTGAATTCCCACCAGGTGCCCACAGC...TTTGGGTGGAAAACAGCCAGCTTTGGCGCTGTTGGGGAGACTCCTCCAGACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp AGGCCAGGCTTTCTGGCCTCTGGTTCCAGCCAGCATCAATTTGGTTGTGGCCAAGGAGCTGTGGGCACCTaGTGGGAATTCACTGAGCTC +
Preference number: 4 (lower is better)
Translates to: RPGFLASGSSQHQFGCGQGAVGT*WEFTEL
Trigger: GAGCTCAGTGAATTCCCACCAGGTGCCCACAGCTCC...TTGGCCACAACCAAATTGATGCTGGCTGGAACCAGAGGCCAGAAAGCCTGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp GGATGCTTCCAGAGGAAGGCTGAGGCTTTTCTGGTAAGGAAGCCAGCTCCGGACGGATGGAGATGGACTTaGCAGTCGATGGTGGCGTCT +
Preference number: 4 (lower is better)
Translates to: GCFQRKAEAFLVRKPAPDGWRWT*QSMVAS
Trigger: AGACGCCACCATCGACTGCCAAGTCCATCTCCATCC...GTCCGGAGCTGGCTTCCTTACCAGAAAAGCCTCAGCCTTCCTCTGGAAGCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp GGATGCTTCCAGAGGAAGGCTGAGGCTTTTCTGGTAAGGAAGCCAGCTCCGGACAATCCTGGCCTGGGATaGAGATGGACTTGGCAGTCG +
Preference number: 4 (lower is better)
Translates to: GCFQRKAEAFLVRKPAPDNPGLG*RWTWQS
Trigger: CGACTGCCAAGTCCATCTCCATCCCAGGCCAGGATT...GTCCGGAGCTGGCTTCCTTACCAGAAAAGCCTCAGCCTTCCTCTGGAAGCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp AGGCCAGGCTTTCTGGCCTCTGGTTCCAGCCAGCATCAATTTGGTTGTGGCCAATGCAGGGAGGAATCCTaGCCTGGGATGGAGATGGAC +
Preference number: 4 (lower is better)
Translates to: RPGFLASGSSQHQFGCGQCREES*PGMEMD
Trigger: GTCCATCTCCATCCCAGGCCAGGATTCCTCCCTGCA...TTGGCCACAACCAAATTGATGCTGGCTGGAACCAGAGGCCAGAAAGCCTGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp AAAGTTCCTCATGGAATGATACAGGTCTGGACTCCAGAGAAAGCAGGACTCTTCCGCGAGCGGCCGCGCTaGCTTGCAGCATCCCGAGAC +
Preference number: 4 (lower is better)
Translates to: KVPHGMIQVWTPEKAGLFRERPR*LAASRD
Trigger: GTCTCGGGATGCTGCAAGCCAGCGCGGCCGCTCGCG...GAAGAGTCCTGCTTTCTCTGGAGTCCAGACCTGTATCATTCCATGAGGAACTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373095.6
CDS-3UTR TCA 90 bp CTGGCTGGCAGCCAGAACCCACCTTCAAGCAAGTTACAAGGACTTGGGGGAAAGGGCGCAGAGGTGATCTaGAGGGGAAAGTTCCTCATG +
Preference number: 4 (lower is better)
Translates to: LAGSQNPPSSKLQGLGGKGAEVI*RGKFLM
Trigger: CATGAGGAACTTTCCCCTTCAGATCACCTCTGCGCC...CTTTCCCCCAAGTCCTTGTAACTTGCTTGAAGGTGGGTTCTGGCTGCCAGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR TCA 90 bp CCCACTGGGAAAGCACACCCCTTAAAGGAGCCCTTCCCCCTTGCCCAGAACGGGAAAGCCCCAGAACTTTaGATGAGAGGCAAATCTACC +
Preference number: 4 (lower is better)
Translates to: PTGKAHPLKEPFPLAQNGKAPEL*MRGKST
Trigger: GGTAGATTTGCCTCTCATTCAAAGTTCTGGGGCTTT...CCCGTTCTGGGCAAGGGGGAAGGGCTCCTTTAAGGGGTGTGCTTTCCCAGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR TCA 90 bp GGGACTGGCTGGCAGCCAGAACCCACCTTCAAGCAAGTTACAAGGACTTGGGGGTCATCAAGAAAGCCATaGGCGAGTTCCCTGAGTCTG +
Preference number: 4 (lower is better)
Translates to: GTGWQPEPTFKQVTRTWGSSRKP*ASSLSL
Trigger: CAGACTCAGGGAACTCGCTCATGGCTTTCTTGATGA...CCCCCAAGTCCTTGTAACTTGCTTGAAGGTGGGTTCTGGCTGCCAGCCAGTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373095.6
CDS-3UTR GCA 90 bp AACAAACACAGCCCACTCAAGCAGTGGTGGCAACATTCTGTTAGAAAGGAGGGGCTGGCCTGCCTGGCCTaGCCTCTAGTGGTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: NKHSPLKQWWQHSVRKEGLACLA*PLVVQR
Trigger: CCTCTGAACCACTAGAGGGCAGGCCAGGCAGGCCAG...CCCCTCCTTTCTAACAGAATGTTGCCACCACTGCTTGAGTGGGCTGTGTTTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373095.6
CDS-3UTR GCA 90 bp CCCTCAGCCACAGGCATCTCTACATTTAGGAGCCGCTGCATGTCCTCAGCCAGAGGCAGAGAAGGACTTTaGTTGCTCCAACCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: PSATGISTFRSRCMSSARGREGL*LLQPSC
Trigger: GCAGGAAGGTTGGAGCAAGCAAAGTCCTTCTCTGCC...TCTGGCTGAGGACATGCAGCGGCTCCTAAATGTAGAGATGCCTGTGGCTGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR GCA 90 bp GGGACTGGCTGGCAGCCAGAACCCACCTTCAAGCAAGTTACAAGGACTTGGGGGGCTTCCTTTTTAAAGTaGCAGTATCGGTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: GTGWQPEPTFKQVTRTWGASFLK*QYRWGR
Trigger: CCTGCCCCACCGATACTGGCACTTTAAAAAGGAAGC...CCCCCAAGTCCTTGTAACTTGCTTGAAGGTGGGTTCTGGCTGCCAGCCAGTCCC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp CCCTCAGCCACAGGCATCTCTACATTTAGGAGCCGCTGCATGTCCTCAGCCAGAGGCATGGATGAGATGTaGCGCAGAGGTGATCTGAAG +
Preference number: 4 (lower is better)
Translates to: PSATGISTFRSRCMSSARGMDEM*RRGDLK
Trigger: CTTCAGATCACCTCTGCGCCACATCTCATCCATGCC...TCTGGCTGAGGACATGCAGCGGCTCCTAAATGTAGAGATGCCTGTGGCTGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp AGGCCAGGCTTTCTGGCCTCTGGTTCCAGCCAGCATCAATTTGGTTGTGGCCAAATGCTACGGGGAGTGTaGACTGGAGTGCATGGAGGA +
Preference number: 4 (lower is better)
Translates to: RPGFLASGSSQHQFGCGQMLRGV*TGVHGG
Trigger: TCCTCCATGCACTCCAGTCCACACTCCCCGTAGCAT...TTGGCCACAACCAAATTGATGCTGGCTGGAACCAGAGGCCAGAAAGCCTGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp CCCTCAGCCACAGGCATCTCTACATTTAGGAGCCGCTGCATGTCCTCAGCCAGACAGACTGCTCCCCACTaGGAAAGCACACCCCTTAAA +
Preference number: 4 (lower is better)
Translates to: PSATGISTFRSRCMSSARQTAPH*ESTPLK
Trigger: TTTAAGGGGTGTGCTTTCCCAGTGGGGAGCAGTCTG...TCTGGCTGAGGACATGCAGCGGCTCCTAAATGTAGAGATGCCTGTGGCTGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp TGCCTGGCCTGCCCTCTAGTGGTTCAGAGGAGAATATTCACAGTGGTGCCTGGGCAACAGCGCCAAAGCTaGCTGTTTTCCACCCAAAGC +
Preference number: 4 (lower is better)
Translates to: CLACPLVVQRRIFTVVPGQQRQS*LFSTQS
Trigger: GCTTTGGGTGGAAAACAGCCAGCTTTGGCGCTGTTG...CCCAGGCACCACTGTGAATATTCTCCTCTGAACCACTAGAGGGCAGGCCAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp AAAGTTCCTCATGGAATGATACAGGTCTGGACTCCAGAGAAAGCAGGACTCTTCGCCCAGGGCCTGGCGTaGGAGGATGTGGCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: KVPHGMIQVWTPEKAGLFAQGLA*EDVAGS
Trigger: AGAGCCTGCCACATCCTCCCACGCCAGGCCCTGGGC...GAAGAGTCCTGCTTTCTCTGGAGTCCAGACCTGTATCATTCCATGAGGAACTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp TGCAGGAAAACCAGCTGCTCAGGACCCAGCCCTGGGCAGAGGGCACGGTCGGTGGCATCAATTTGGTTGTaGCCAAATTCTCAGTCCAAT +
Preference number: 4 (lower is better)
Translates to: CRKTSCSGPSPGQRARSVASIWL*PNSQSN
Trigger: ATTGGACTGAGAATTTGGCCACAACCAAATTGATGC...CACCGACCGTGCCCTCTGCCCAGGGCTGGGTCCTGAGCAGCTGGTTTTCCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp GGGACTGGCTGGCAGCCAGAACCCACCTTCAAGCAAGTTACAAGGACTTGGGGGAGGCTTTCTGGCCTCTaGTTCCAGCCAGCATCAATT +
Preference number: 4 (lower is better)
Translates to: GTGWQPEPTFKQVTRTWGRLSGL*FQPASI
Trigger: AATTGATGCTGGCTGGAACCAGAGGCCAGAAAGCCT...CCCCCAAGTCCTTGTAACTTGCTTGAAGGTGGGTTCTGGCTGCCAGCCAGTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp AGGCCAGGCTTTCTGGCCTCTGGTTCCAGCCAGCATCAATTTGGTTGTGGCCAAGAAGTCCAGGAGCTGTaGGCACCTGGTGGGAATTCA +
Preference number: 4 (lower is better)
Translates to: RPGFLASGSSQHQFGCGQEVQEL*APGGNS
Trigger: TGAATTCCCACCAGGTGCCCACAGCTCCTGGACTTC...TTGGCCACAACCAAATTGATGCTGGCTGGAACCAGAGGCCAGAAAGCCTGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR TCA 90 bp AGGCCAGGCTTTCTGGCCTCTGGTTCCAGCCAGCATCAATTTGGTTGTGGCCAATGTTGCTGCCATCTGTaGAATCCTGGCTCTGCACGA +
Preference number: 4 (lower is better)
Translates to: RPGFLASGSSQHQFGCGQCCCHL*NPGSAR
Trigger: TCGTGCAGAGCCAGGATTTCACAGATGGCAGCAACA...TTGGCCACAACCAAATTGATGCTGGCTGGAACCAGAGGCCAGAAAGCCTGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR TCA 90 bp GCAAGGGAACAACGGAGCAAGGCCCTGCTGCTAAGACGTGACCAAAGCCAGTGCGCGAGGAGGCAATATTaGACCGTGAACTCAAGAAGA +
Preference number: 4 (lower is better)
Translates to: AREQRSKALLLRRDQSQCARRQY*TVNSRR
Trigger: TCTTCTTGAGTTCACGGTTCAATATTGCCTCCTCGC...GCACTGGCTTTGGTCACGTCTTAGCAGCAGGGCCTTGCTCCGTTGTTCCCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR TCA 90 bp GGGGGTGAGCATGTGCAAAGTGCAGGCTGCAAGGCAGCGGGAGGACATTTGCCGTCAATATATAGAATTTaGAGTCCAGGAGCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: GGEHVQSAGCKAAGGHLPSIYRI*SPGAVG
Trigger: GCCCACAGCTCCTGGACTTCAAATTCTATATATTGA...CGGCAAATGTCCTCCCGCTGCCTTGCAGCCTGCACTTTGCACATGCTCACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR GCA 90 bp CTGGTCTGGAGGAGTCTCCCCAACAGCGCCAAAGCTGGCTGTTTTCCACCCAAAGCTTCCTTTTTAAAGTaGCAGTATCGGTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: LVWRSLPNSAKAGCFPPKASFLK*QYRWGR
Trigger: CCTGCCCCACCGATACTGGCACTTTAAAAAGGAAGC...TTTGGGTGGAAAACAGCCAGCTTTGGCGCTGTTGGGGAGACTCCTCCAGACCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp AAAGTTCCTCATGGAATGATACAGGTCTGGACTCCAGAGAAAGCAGGACTCTTCCAGAGGCGCTGCTGCTaGTGGACGTGTTGCGGCGGT +
Preference number: 4 (lower is better)
Translates to: KVPHGMIQVWTPEKAGLFQRRCC*WTCCGG
Trigger: ACCGCCGCAACACGTCCACCAGCAGCAGCGCCTCTG...GAAGAGTCCTGCTTTCTCTGGAGTCCAGACCTGTATCATTCCATGAGGAACTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp GGGACTGGCTGGCAGCCAGAACCCACCTTCAAGCAAGTTACAAGGACTTGGGGGACACCTGCTCCTCAATaGCTTTCAATCACAACTGGC +
Preference number: 4 (lower is better)
Translates to: GTGWQPEPTFKQVTRTWGTPAPQ*LSITTG
Trigger: GCCAGTTGTGATTGAAAGCCATTGAGGAGCAGGTGT...CCCCCAAGTCCTTGTAACTTGCTTGAAGGTGGGTTCTGGCTGCCAGCCAGTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp AACAAACACAGCCCACTCAAGCAGTGGTGGCAACATTCTGTTAGAAAGGAGGGGATTCACAGTGGTGCCTaGGCCTTGGTGGGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: NKHSPLKQWWQHSVRKEGIHSGA*ALVGQE
Trigger: CTCCTGGCCCACCAAGGCCCAGGCACCACTGTGAAT...CCCCTCCTTTCTAACAGAATGTTGCCACCACTGCTTGAGTGGGCTGTGTTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373095.6
CDS-3UTR CCA 90 bp CCCACATGGGGACAAGGCCAGGCTTTCTGGCCTCTGGTTCCAGCCAGCATCAATCAAGTTACAAGGACTTaGGGGAAAGTGCTGAGAGCA +
Preference number: 4 (lower is better)
Translates to: PTWGQGQAFWPLVPASINQVTRT*GKVLRA
Trigger: TGCTCTCAGCACTTTCCCCCAAGTCCTTGTAACTTG...ATTGATGCTGGCTGGAACCAGAGGCCAGAAAGCCTGGCCTTGTCCCCATGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR TCA 90 bp AGGAAGGCTGAGGCTTTTCTGGTAAGGAAGCCAGCTCCGGACCAGTCCAGCCACGGCAATATTGAACCGTaGACTCAAGAAGAAAGACGG +
Preference number: 4 (lower is better)
Translates to: RKAEAFLVRKPAPDQSSHGNIEP*TQEERR
Trigger: CCGTCTTTCTTCTTGAGTTCACGGTTCAATATTGCC...GTGGCTGGACTGGTCCGGAGCTGGCTTCCTTACCAGAAAAGCCTCAGCCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR TCA 90 bp CTGGTCTGGAGGAGTCTCCCCAACAGCGCCAAAGCTGGCTGTTTTCCACCCAAAGCGAGGAGGCAATATTaGACCGTGAACTCAAGAAGA +
Preference number: 4 (lower is better)
Translates to: LVWRSLPNSAKAGCFPPKARRQY*TVNSRR
Trigger: TCTTCTTGAGTTCACGGTTCAATATTGCCTCCTCGC...TTTGGGTGGAAAACAGCCAGCTTTGGCGCTGTTGGGGAGACTCCTCCAGACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR TCA 90 bp CCCTCAGCCACAGGCATCTCTACATTTAGGAGCCGCTGCATGTCCTCAGCCAGAACGCTGACACTAGCCTaGGTTCCCCTAACAATGTTA +
Preference number: 4 (lower is better)
Translates to: PSATGISTFRSRCMSSARTLTLA*VPLTML
Trigger: TAACATTGTTAGGGGAACTCAGGCTAGTGTCAGCGT...TCTGGCTGAGGACATGCAGCGGCTCCTAAATGTAGAGATGCCTGTGGCTGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373095.6
CDS-3UTR GCA 90 bp GCAAGGGAACAACGGAGCAAGGCCCTGCTGCTAAGACGTGACCAAAGCCAGTGCAACAAATGCTGGAAATaGTCTGTTCCCAATGCCAGG +
Preference number: 4 (lower is better)
Translates to: AREQRSKALLLRRDQSQCNKCWK*SVPNAR
Trigger: CCTGGCATTGGGAACAGAGCATTTCCAGCATTTGTT...GCACTGGCTTTGGTCACGTCTTAGCAGCAGGGCCTTGCTCCGTTGTTCCCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR GCA 90 bp AAAGTTCCTCATGGAATGATACAGGTCTGGACTCCAGAGAAAGCAGGACTCTTCTCAGGGAGTTGGTGCTaGTGCCCCCACTGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: KVPHGMIQVWTPEKAGLFSGSWC*CPHCWS
Trigger: GGACCAGCAGTGGGGGCAGCAGCACCAACTCCCTGA...GAAGAGTCCTGCTTTCTCTGGAGTCCAGACCTGTATCATTCCATGAGGAACTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp CTCCCCATCTTCTGGGGGCCAATTCGTCTGGACACTGTGCGGTCAGCTTCCTTTGCTTTCAATCACAACTaGCTCGTAGACCCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: LPIFWGPIRLDTVRSASFAFNHN*LVDPRR
Trigger: TCTTCTGGGGTCTACGAGCCAGTTGTGATTGAAAGC...AAAGGAAGCTGACCGCACAGTGTCCAGACGAATTGGCCCCCAGAAGATGGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp CCCTCTAGTGGTTCAGAGGAGAATATTCACAGTGGTGCCTGGGCCTTGGTGGGCGGAATGATACAGGTCTaGACTCCAGAGAAAGCAGGA +
Preference number: 4 (lower is better)
Translates to: PSSGSEENIHSGAWALVGGMIQV*TPEKAG
Trigger: TCCTGCTTTCTCTGGAGTCCAGACCTGTATCATTCC...GCCCACCAAGGCCCAGGCACCACTGTGAATATTCTCCTCTGAACCACTAGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp CCCTCAGCCACAGGCATCTCTACATTTAGGAGCCGCTGCATGTCCTCAGCCAGAGGGGAAAGTTCCTCATaGAATGATACAGGTCTGGAC +
Preference number: 4 (lower is better)
Translates to: PSATGISTFRSRCMSSARGESSS*NDTGLD
Trigger: GTCCAGACCTGTATCATTCCATGAGGAACTTTCCCC...TCTGGCTGAGGACATGCAGCGGCTCCTAAATGTAGAGATGCCTGTGGCTGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp GGATGCTTCCAGAGGAAGGCTGAGGCTTTTCTGGTAAGGAAGCCAGCTCCGGACGGGGAAAGTTCCTCATaGAATGATACAGGTCTGGAC +
Preference number: 4 (lower is better)
Translates to: GCFQRKAEAFLVRKPAPDGESSS*NDTGLD
Trigger: GTCCAGACCTGTATCATTCCATGAGGAACTTTCCCC...GTCCGGAGCTGGCTTCCTTACCAGAAAAGCCTCAGCCTTCCTCTGGAAGCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp CAGAGGAGAACATGGACACCCTCCATCCTGATAGACATGCCATGTGGTCAGTTTGTGACCAGGAGTCCTTaGGAAGGAGCTCAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: QRRTWTPSILIDMPCGQFVTRSP*EGAQGR
Trigger: CCTTCCCTGAGCTCCTTCCCAAGGACTCCTGGTCAC...AAACTGACCACATGGCATGTCTATCAGGATGGAGGGTGTCCATGTTCTCCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373095.6
CDS-3UTR CCA 90 bp GCAAGGGAACAACGGAGCAAGGCCCTGCTGCTAAGACGTGACCAAAGCCAGTGCGATAGACATGCCATGTaGTCAGTTTGTGCGGTAAAC +
Preference number: 4 (lower is better)
Translates to: AREQRSKALLLRRDQSQCDRHAM*SVCAVN
Trigger: GTTTACCGCACAAACTGACCACATGGCATGTCTATC...GCACTGGCTTTGGTCACGTCTTAGCAGCAGGGCCTTGCTCCGTTGTTCCCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373095.6
CDS-3UTR CCA 90 bp GCAAGGGAACAACGGAGCAAGGCCCTGCTGCTAAGACGTGACCAAAGCCAGTGCCCACTCAAGCAGTGGTaGCAACATTCTGTTAGAAAG +
Preference number: 4 (lower is better)
Translates to: AREQRSKALLLRRDQSQCPLKQW*QHSVRK
Trigger: CTTTCTAACAGAATGTTGCCACCACTGCTTGAGTGG...GCACTGGCTTTGGTCACGTCTTAGCAGCAGGGCCTTGCTCCGTTGTTCCCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373095.6
CDS-3UTR CCA 90 bp TGCCTGGCCTGCCCTCTAGTGGTTCAGAGGAGAATATTCACAGTGGTGCCTGGGAGCCCACTCAAGCAGTaGTGGCAACATTCTGTTAGA +
Preference number: 4 (lower is better)
Translates to: CLACPLVVQRRIFTVVPGSPLKQ*WQHSVR
Trigger: TCTAACAGAATGTTGCCACCACTGCTTGAGTGGGCT...CCCAGGCACCACTGTGAATATTCTCCTCTGAACCACTAGAGGGCAGGCCAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373095.6
CDS-3UTR TCA 90 bp AGGCCAGGCTTTCTGGCCTCTGGTTCCAGCCAGCATCAATTTGGTTGTGGCCAAAAGTTCCTCATGGAATaGTACAGGTCTGGACTCCAG +
Preference number: 4 (lower is better)
Translates to: RPGFLASGSSQHQFGCGQKFLME*YRSGLQ
Trigger: CTGGAGTCCAGACCTGTATCATTCCATGAGGAACTT...TTGGCCACAACCAAATTGATGCTGGCTGGAACCAGAGGCCAGAAAGCCTGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR GCA 90 bp GGATGCTTCCAGAGGAAGGCTGAGGCTTTTCTGGTAAGGAAGCCAGCTCCGGACAACAAATGCTGGAAATaGTCTGTTCCCAATGCCAGG +
Preference number: 4 (lower is better)
Translates to: GCFQRKAEAFLVRKPAPDNKCWK*SVPNAR
Trigger: CCTGGCATTGGGAACAGAGCATTTCCAGCATTTGTT...GTCCGGAGCTGGCTTCCTTACCAGAAAAGCCTCAGCCTTCCTCTGGAAGCATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp CAGAGGAGAACATGGACACCCTCCATCCTGATAGACATGCCATGTGGTCAGTTTATGCTACGGGGAGTGTaGACTGGAGTGCATGGAGGA +
Preference number: 4 (lower is better)
Translates to: QRRTWTPSILIDMPCGQFMLRGV*TGVHGG
Trigger: TCCTCCATGCACTCCAGTCCACACTCCCCGTAGCAT...AAACTGACCACATGGCATGTCTATCAGGATGGAGGGTGTCCATGTTCTCCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373095.6
CDS-3UTR CCA 90 bp AAAGTTCCTCATGGAATGATACAGGTCTGGACTCCAGAGAAAGCAGGACTCTTCATTCACAGTGGTGCCTaGGCCTTGGTGGGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: KVPHGMIQVWTPEKAGLFIHSGA*ALVGQE
Trigger: CTCCTGGCCCACCAAGGCCCAGGCACCACTGTGAAT...GAAGAGTCCTGCTTTCTCTGGAGTCCAGACCTGTATCATTCCATGAGGAACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp AGGCCAGGCTTTCTGGCCTCTGGTTCCAGCCAGCATCAATTTGGTTGTGGCCAACAAGTTACAAGGACTTaGGGGAAAGTGCTGAGAGCA +
Preference number: 4 (lower is better)
Translates to: RPGFLASGSSQHQFGCGQQVTRT*GKVLRA
Trigger: TGCTCTCAGCACTTTCCCCCAAGTCCTTGTAACTTG...TTGGCCACAACCAAATTGATGCTGGCTGGAACCAGAGGCCAGAAAGCCTGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp AAAGTTCCTCATGGAATGATACAGGTCTGGACTCCAGAGAAAGCAGGACTCTTCTGTCCAGGGACTGGCTaGCAGCCAGAACCCACCTTC +
Preference number: 4 (lower is better)
Translates to: KVPHGMIQVWTPEKAGLFCPGTG*QPEPTF
Trigger: GAAGGTGGGTTCTGGCTGCCAGCCAGTCCCTGGACA...GAAGAGTCCTGCTTTCTCTGGAGTCCAGACCTGTATCATTCCATGAGGAACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp AAAGTTCCTCATGGAATGATACAGGTCTGGACTCCAGAGAAAGCAGGACTCTTCACCTCCCTCCTAGGCTaGGTGAGGTCACGCAGACAC +
Preference number: 4 (lower is better)
Translates to: KVPHGMIQVWTPEKAGLFTSLLG*VRSRRH
Trigger: GTGTCTGCGTGACCTCACCCAGCCTAGGAGGGAGGT...GAAGAGTCCTGCTTTCTCTGGAGTCCAGACCTGTATCATTCCATGAGGAACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp AAAGTTCCTCATGGAATGATACAGGTCTGGACTCCAGAGAAAGCAGGACTCTTCCTGGGGTTCCTGGTCTaGAGGAGTCTCCCCAACAGC +
Preference number: 4 (lower is better)
Translates to: KVPHGMIQVWTPEKAGLFLGFLV*RSLPNS
Trigger: GCTGTTGGGGAGACTCCTCCAGACCAGGAACCCCAG...GAAGAGTCCTGCTTTCTCTGGAGTCCAGACCTGTATCATTCCATGAGGAACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp AAAGTTCCTCATGGAATGATACAGGTCTGGACTCCAGAGAAAGCAGGACTCTTCCAAGGCCAGGCTTTCTaGCCTCTGGTTCCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: KVPHGMIQVWTPEKAGLFQGQAF*PLVPAS
Trigger: GCTGGCTGGAACCAGAGGCCAGAAAGCCTGGCCTTG...GAAGAGTCCTGCTTTCTCTGGAGTCCAGACCTGTATCATTCCATGAGGAACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp AAAGTTCCTCATGGAATGATACAGGTCTGGACTCCAGAGAAAGCAGGACTCTTCACACCTCCTCAGGGCTaGACAGGTTCTGGTCGGGTT +
Preference number: 4 (lower is better)
Translates to: KVPHGMIQVWTPEKAGLFTPPQG*TGSGRV
Trigger: AACCCGACCAGAACCTGTCCAGCCCTGAGGAGGTGT...GAAGAGTCCTGCTTTCTCTGGAGTCCAGACCTGTATCATTCCATGAGGAACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp AAAGTTCCTCATGGAATGATACAGGTCTGGACTCCAGAGAAAGCAGGACTCTTCACGGGGAGTGTGGACTaGAGTGCATGGAGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: KVPHGMIQVWTPEKAGLFTGSVD*SAWRRH
Trigger: ATGCCTCCTCCATGCACTCCAGTCCACACTCCCCGT...GAAGAGTCCTGCTTTCTCTGGAGTCCAGACCTGTATCATTCCATGAGGAACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp AAAGTTCCTCATGGAATGATACAGGTCTGGACTCCAGAGAAAGCAGGACTCTTCGGAGGAATCCTGGCCTaGGATGGAGATGGACTTGGC +
Preference number: 4 (lower is better)
Translates to: KVPHGMIQVWTPEKAGLFGGILA*DGDGLG
Trigger: GCCAAGTCCATCTCCATCCCAGGCCAGGATTCCTCC...GAAGAGTCCTGCTTTCTCTGGAGTCCAGACCTGTATCATTCCATGAGGAACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
3UTR CAA 72 bp AGCAGCACCTCCCCTCACCAGGGCGAGGAGGCAATATaGAACCGTGAACTCAAGAAGAAAGACGGAAAGAAA +
Preference number: 4 (lower is better)
Translates to: SSTSPHQGEEAI*NRELKKKDGKK
Trigger: TTTCTTTCCGTCTTTCTTCTTGAGTTCACGGTTCAATATTGCCTCCTCGCCCTGGTGAGGGGAGGTGCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR TCA 90 bp AAAGTTCCTCATGGAATGATACAGGTCTGGACTCCAGAGAAAGCAGGACTCTTCGAGGCAAATCTACCCTaGATGCACCTCCCTCCTAGG +
Preference number: 4 (lower is better)
Translates to: KVPHGMIQVWTPEKAGLFEANLP*MHLPPR
Trigger: CCTAGGAGGGAGGTGCATTCAGGGTAGATTTGCCTC...GAAGAGTCCTGCTTTCTCTGGAGTCCAGACCTGTATCATTCCATGAGGAACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR TCA 90 bp AGGCCAGGCTTTCTGGCCTCTGGTTCCAGCCAGCATCAATTTGGTTGTGGCCAATCAATATATAGAATTTaGAGTCCAGGAGCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: RPGFLASGSSQHQFGCGQSIYRI*SPGAVG
Trigger: GCCCACAGCTCCTGGACTTCAAATTCTATATATTGA...TTGGCCACAACCAAATTGATGCTGGCTGGAACCAGAGGCCAGAAAGCCTGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR GCA 90 bp CAGAGGAGAACATGGACACCCTCCATCCTGATAGACATGCCATGTGGTCAGTTTTTGCTCCAACCTTCCTaGAGGAAAACCAGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: QRRTWTPSILIDMPCGQFLLQPS*RKTSCS
Trigger: TGAGCAGCTGGTTTTCCTGCAGGAAGGTTGGAGCAA...AAACTGACCACATGGCATGTCTATCAGGATGGAGGGTGTCCATGTTCTCCTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373095.6
CDS-3UTR CCA 90 bp TGGGAATTCACTGAGCTCAAGGGGACAAGAGGGCTGAGGACAGGGCTCCCACATGCATCAATTTGGTTGTaGCCAAATTCTCAGTCCAAT +
Preference number: 4 (lower is better)
Translates to: WEFTELKGTRGLRTGLPHASIWL*PNSQSN
Trigger: ATTGGACTGAGAATTTGGCCACAACCAAATTGATGC...ATGTGGGAGCCCTGTCCTCAGCCCTCTTGTCCCCTTGAGCTCAGTGAATTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CCA 90 bp CAGAGGAGAACATGGACACCCTCCATCCTGATAGACATGCCATGTGGTCAGTTTAGGCTTTCTGGCCTCTaGTTCCAGCCAGCATCAATT +
Preference number: 4 (lower is better)
Translates to: QRRTWTPSILIDMPCGQFRLSGL*FQPASI
Trigger: AATTGATGCTGGCTGGAACCAGAGGCCAGAAAGCCT...AAACTGACCACATGGCATGTCTATCAGGATGGAGGGTGTCCATGTTCTCCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373095.6
CDS-3UTR TCA 90 bp AAAGTTCCTCATGGAATGATACAGGTCTGGACTCCAGAGAAAGCAGGACTCTTCCCCTTGACGACAAGCTaGCAAAATCCCCTCCATCCA +
Preference number: 4 (lower is better)
Translates to: KVPHGMIQVWTPEKAGLFPLTTS*QNPLHP
Trigger: TGGATGGAGGGGATTTTGTCAGCTTGTCGTCAAGGG...GAAGAGTCCTGCTTTCTCTGGAGTCCAGACCTGTATCATTCCATGAGGAACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373095.6
CDS-3UTR CCA 90 bp AACAAACACAGCCCACTCAAGCAGTGGTGGCAACATTCTGTTAGAAAGGAGGGGGGAATGATACAGGTCTaGACTCCAGAGAAAGCAGGA +
Preference number: 4 (lower is better)
Translates to: NKHSPLKQWWQHSVRKEGGMIQV*TPEKAG
Trigger: TCCTGCTTTCTCTGGAGTCCAGACCTGTATCATTCC...CCCCTCCTTTCTAACAGAATGTTGCCACCACTGCTTGAGTGGGCTGTGTTTGTT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000373095.6
CDS-3UTR CCA 90 bp AACAAACACAGCCCACTCAAGCAGTGGTGGCAACATTCTGTTAGAAAGGAGGGGAGACAGAGGAGAACATaGACACCCTCCATCCTGATA +
Preference number: 4 (lower is better)
Translates to: NKHSPLKQWWQHSVRKEGRQRRT*TPSILI
Trigger: TATCAGGATGGAGGGTGTCCATGTTCTCCTCTGTCT...CCCCTCCTTTCTAACAGAATGTTGCCACCACTGCTTGAGTGGGCTGTGTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373095.6
CDS-3UTR GCA 90 bp AAAGTTCCTCATGGAATGATACAGGTCTGGACTCCAGAGAAAGCAGGACTCTTCTTGCTCCAACCTTCCTaGAGGAAAACCAGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: KVPHGMIQVWTPEKAGLFLLQPS*RKTSCS
Trigger: TGAGCAGCTGGTTTTCCTGCAGGAAGGTTGGAGCAA...GAAGAGTCCTGCTTTCTCTGGAGTCCAGACCTGTATCATTCCATGAGGAACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS TCA 90 bp GATGGTGGCGGAGACGGCGGAGATCGGAGTCCGGGGCCCCAGGTCTaGGAGATCCACCAGTCCAGTTCGCGGGCCGGCGGGCTTCACCCT +
Preference number: 5 (lower is better)
Translates to: DGGGDGGDRSPGPQV*EIHQSSSRAGGLHP
Trigger: AGGGTGAAGCCCGCCGGCCCGCGAACTGGACTGGTGGATCTCTCAGACCTGGGGCCCCGGACTCCGATCTCCGCCGTCTCCGCCACCATC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373095.6
ENST00000494606.1
CDS GCA 90 bp CCTCAGGGCCCTCCACGGTCATGCCAAGGCCCCCAGAGGCGCTGCTaGTGGTGGACGTGTTGCGGCGGTGCGTCAGGTCTGAGAGGCTGG +
Preference number: 5 (lower is better)
Translates to: PQGPPRSCQGPQRRC*WWTCCGGASGLRGW
Trigger: CCAGCCTCTCAGACCTGACGCACCGCCGCAACACGTCCACCAGCAGCAGCGCCTCTGGGGGCCTTGGCATGACCGTGGAGGGCCCTGAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300434.3
ENST00000373084.8
ENST00000373095.6
ENST00000465821.5
CDS GCA 90 bp TGCCCTCAGGGCCCTCCACGGTCATGCCAAGGCCCCCAGAGGCGCTaGTGCTGGTGGACGTGTTGCGGCGGTGCGTCAGGTCTGAGAGGC +
Preference number: 5 (lower is better)
Translates to: CPQGPPRSCQGPQRR*CWWTCCGGASGLRG
Trigger: GCCTCTCAGACCTGACGCACCGCCGCAACACGTCCACCAGCAGCAGCGCCTCTGGGGGCCTTGGCATGACCGTGGAGGGCCCTGAGGGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300434.3
ENST00000373084.8
ENST00000373095.6
ENST00000465821.5
CDS CCA 90 bp GGCCCTCCACGGTCATGCCAAGGCCCCCAGAGGCGCTGCTGCTGGTaGACGTGTTGCGGCGGTGCGTCAGGTCTGAGAGGCTGGAGGAGC +
Preference number: 5 (lower is better)
Translates to: GPPRSCQGPQRRCCW*TCCGGASGLRGWRS
Trigger: GCTCCTCCAGCCTCTCAGACCTGACGCACCGCCGCAACACGTCCACCAGCAGCAGCGCCTCTGGGGGCCTTGGCATGACCGTGGAGGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300434.3
ENST00000373084.8
ENST00000373095.6
ENST00000465821.5
CDS CCA 90 bp CAGGGCCCTCCACGGTCATGCCAAGGCCCCCAGAGGCGCTGCTGCTaGTGGACGTGTTGCGGCGGTGCGTCAGGTCTGAGAGGCTGGAGG +
Preference number: 5 (lower is better)
Translates to: QGPPRSCQGPQRRCC*WTCCGGASGLRGWR
Trigger: CCTCCAGCCTCTCAGACCTGACGCACCGCCGCAACACGTCCACCAGCAGCAGCGCCTCTGGGGGCCTTGGCATGACCGTGGAGGGCCCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300434.3
ENST00000373084.8
ENST00000373095.6
ENST00000465821.5
CDS CCA 90 bp GGGGCCGGGACCCAGTCAGGGAGTTGGTGCTGCTGCCCCCACTGCTaGTCCCACCACCCTTACACGTCAGCTGCAGGGAGGAATCCTGGC +
Preference number: 5 (lower is better)
Translates to: GAGTQSGSWCCCPHC*SHHPYTSAAGRNPG
Trigger: GCCAGGATTCCTCCCTGCAGCTGACGTGTAAGGGTGGTGGGACCAGCAGTGGGGGCAGCAGCACCAACTCCCTGACTGGGTCCCGGCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS CCA 90 bp CTCACCGCCCCCTCACCCCCACCCGAGAGCAGCCCAGGAGGCTACTaGGAGGTGATAGCTGCCATTCCAGGCCGTGGCCAGCAGGAGTCA +
Preference number: 5 (lower is better)
Translates to: LTAPSPPPESSPGGY*EVIAAIPGRGQQES
Trigger: TGACTCCTGCTGGCCACGGCCTGGAATGGCAGCTATCACCTCCCAGTAGCCTCCTGGGCTGCTCTCGGGTGGGGGTGAGGGGGCGGTGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000465821.5
CDS TCA 90 bp AGAGGCGCTGCTGCTGGTGGACGTGTTGCGGCGGTGCGTCAGGTCTaGGAGGCTGGAGGAGCGCGAGTGCTCTGTGCTGTAGCCGGAGAT +
Preference number: 5 (lower is better)
Translates to: RGAAAGGRVAAVRQV*EAGGARVLCAVAGD
Trigger: ATCTCCGGCTACAGCACAGAGCACTCGCGCTCCTCCAGCCTCTCAGACCTGACGCACCGCCGCAACACGTCCACCAGCAGCAGCGCCTCT
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300434.3
ENST00000373084.8
ENST00000373095.6
ENST00000465821.5
CDS-3UTR CAA 90 bp AGGGCTCCCACATGGGGACAAGGCCAGGCTTTCTGGCCTCTGGTTCCAGCCAGCCTGCTGGTGGACGTGTaGCGGCGGTGCGTCAGGTCT +
Preference number: 5 (lower is better)
Translates to: RAPTWGQGQAFWPLVPASLLVDV*RRCVRS
Trigger: AGACCTGACGCACCGCCGCAACACGTCCACCAGCAG...GCTGGCTGGAACCAGAGGCCAGAAAGCCTGGCCTTGTCCCCATGTGGGAGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS CCA 90 bp AGACCCCAGAAGAGACCCTGGTGGCAAGCTGGATGCCGCTCAGCGTaGCAGAGCCATCGCGGCTCACGAACAGCCGGAGGTTGCTGTCCT +
Preference number: 5 (lower is better)
Translates to: RPQKRPWWQAGCRSA*QSHRGSRTAGGCCP
Trigger: AGGACAGCAACCTCCGGCTGTTCGTGAGCCGCGATGGCTCTGCCACGCTGAGCGGCATCCAGCTTGCCACCAGGGTCTCTTCTGGGGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300434.3
ENST00000373084.8
ENST00000373095.6
CDS CCA 90 bp AAGCATCAGAGTCTGTGGGGCCTGCAGAGCCCTTCCGGGCACATCTaGCTGTGCCACCCCATCCTCACGGTCACCTCGGCAGGGAGTCAC +
Preference number: 5 (lower is better)
Translates to: KHQSLWGLQSPSGHI*LCHPILTVTSAGSH
Trigger: GTGACTCCCTGCCGAGGTGACCGTGAGGATGGGGTGGCACAGCCAGATGTGCCCGGAAGGGCTCTGCAGGCCCCACAGACTCTGATGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465821.5
CDS-3UTR CAA 90 bp GGGGGTGAGCATGTGCAAAGTGCAGGCTGCAAGGCAGCGGGAGGACATTTGCCGGACCCAGTCAGGGAGTaGGTGCTGCTGCCCCCACTG +
Preference number: 5 (lower is better)
Translates to: GGEHVQSAGCKAAGGHLPDPVRE*VLLPPL
Trigger: CAGTGGGGGCAGCAGCACCAACTCCCTGACTGGGTC...CGGCAAATGTCCTCCCGCTGCCTTGCAGCCTGCACTTTGCACATGCTCACCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS CCA 90 bp TGCTGCTGGTGGACGTGTTGCGGCGGTGCGTCAGGTCTGAGAGGCTaGAGGAGCGCGAGTGCTCTGTGCTGTAGCCGGAGATCTTGGACT +
Preference number: 5 (lower is better)
Translates to: CCWWTCCGGASGLRG*RSASALCCSRRSWT
Trigger: AGTCCAAGATCTCCGGCTACAGCACAGAGCACTCGCGCTCCTCCAGCCTCTCAGACCTGACGCACCGCCGCAACACGTCCACCAGCAGCA
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300434.3
ENST00000373084.8
ENST00000373095.6
ENST00000465821.5
CDS CCA 90 bp ACGATGGCATCCGCATCGATCCGCGTGTCGTCCACCCAGGTCGGGTaGCTCTCCACCGAGTCCTTCTTCCGCCTGAAAGAGCGATCGGAC +
Preference number: 5 (lower is better)
Translates to: TMASASIRVSSTQVG*LSTESFFRLKERSD
Trigger: GTCCGATCGCTCTTTCAGGCGGAAGAAGGACTCGGTGGAGAGCCACCCGACCTGGGTGGACGACACGCGGATCGATGCGGATGCCATCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300434.3
ENST00000373084.8
ENST00000373095.6
ENST00000465821.5
CDS CCA 90 bp CGGGAGTGGCCAGAGTGGAACACCTCCTCAGGGCTGGACAGGTTCTaGTCGGGTTCCTCTGGCAGCCCTGAGCTGAGAATAGTGGGCCGA +
Preference number: 5 (lower is better)
Translates to: REWPEWNTSSGLDRF*SGSSGSPELRIVGR
Trigger: TCGGCCCACTATTCTCAGCTCAGGGCTGCCAGAGGAACCCGACCAGAACCTGTCCAGCCCTGAGGAGGTGTTCCACTCTGGCCACTCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373084.8
ENST00000373095.6
ENST00000465821.5
CDS-3UTR CAA 90 bp ACCAAAGCCAGTGCTCCTGGAGTGAGTGGGGACACAGGTAGAGAGGCCCCCTCACTGCTGGTGGACGTGTaGCGGCGGTGCGTCAGGTCT +
Preference number: 5 (lower is better)
Translates to: TKASAPGVSGDTGREAPSLLVDV*RRCVRS
Trigger: AGACCTGACGCACCGCCGCAACACGTCCACCAGCAG...TGAGGGGGCCTCTCTACCTGTGTCCCCACTCACTCCAGGAGCACTGGCTTTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CAA 90 bp AGGGCTCCCACATGGGGACAAGGCCAGGCTTTCTGGCCTCTGGTTCCAGCCAGCAAGGGGCAGGAGAGTTaGTCCAGGGACTGGCTGGCA +
Preference number: 5 (lower is better)
Translates to: RAPTWGQGQAFWPLVPASKGQES*SRDWLA
Trigger: TGCCAGCCAGTCCCTGGACAAACTCTCCTGCCCCTT...GCTGGCTGGAACCAGAGGCCAGAAAGCCTGGCCTTGTCCCCATGTGGGAGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CAA 90 bp AGGGCTCCCACATGGGGACAAGGCCAGGCTTTCTGGCCTCTGGTTCCAGCCAGCGGGATGGAGATGGACTaGGCAGTCGATGGTGGCGTC +
Preference number: 5 (lower is better)
Translates to: RAPTWGQGQAFWPLVPASGMEMD*AVDGGV
Trigger: GACGCCACCATCGACTGCCAAGTCCATCTCCATCCC...GCTGGCTGGAACCAGAGGCCAGAAAGCCTGGCCTTGTCCCCATGTGGGAGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CAA 90 bp GGATGCTTCCAGAGGAAGGCTGAGGCTTTTCTGGTAAGGAAGCCAGCTCCGGACAGCGGCCGCGCTGGCTaGCAGCATCCCGAGACGCGA +
Preference number: 5 (lower is better)
Translates to: GCFQRKAEAFLVRKPAPDSGRAG*QHPETR
Trigger: TCGCGTCTCGGGATGCTGCAAGCCAGCGCGGCCGCT...GTCCGGAGCTGGCTTCCTTACCAGAAAAGCCTCAGCCTTCCTCTGGAAGCATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373095.6
CDS CCA 90 bp GTGAGAGGAGCGTGTGGGAGGGCTGAGGGAGTGTGGGCTCCTGGCTaGCGGAAGCCCAGAAGGGTAACTTGGCAAAAGTTGGAGAGGGAG +
Preference number: 5 (lower is better)
Translates to: VRGACGRAEGVWAPG*RKPRRVTWQKLERE
Trigger: CTCCCTCTCCAACTTTTGCCAAGTTACCCTTCTGGGCTTCCGCCAGCCAGGAGCCCACACTCCCTCAGCCCTCCCACACGCTCCTCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300434.3
ENST00000373084.8
CDS CCA 90 bp GAGTGTTCTTCGTGTCATATCCCTCGAGCAGGCAGCAGCGCACCGTaGAGCCCGAGCCCGCAAACTCGGCCAGGTTCAAGTCAGCGAAGC +
Preference number: 5 (lower is better)
Translates to: ECSSCHIPRAGSSAP*SPSPQTRPGSSQRS
Trigger: GCTTCGCTGACTTGAACCTGGCCGAGTTTGCGGGCTCGGGCTCCACGGTGCGCTGCTGCCTGCTCGAGGGATATGACACGAAGAACACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300434.3
ENST00000373084.8
ENST00000373095.6
ENST00000479828.1
CDS-3UTR CAA 90 bp TCTGGAGGAGTCTCCCCAACAGCGCCAAAGCTGGCTGTTTTCCACCCAAAGCCCAGGAGCCCTTCCCCCTaGCCCAGAACGGGGGATGCT +
Preference number: 5 (lower is better)
Translates to: SGGVSPTAPKLAVFHPKPRSPSP*PRTGDA
Trigger: AGCATCCCCCGTTCTGGGCAAGGGGGAAGGGCTCCT...GGGCTTTGGGTGGAAAACAGCCAGCTTTGGCGCTGTTGGGGAGACTCCTCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS GCA 90 bp TGCTGTAGCCGGAGATCTTGGACTGCTGGCTGGCATAGCTGGAGTTaGGGGAGTGGCCAGAGTGGAACACCTCCTCAGGGCTGGACAGGT +
Preference number: 5 (lower is better)
Translates to: CCSRRSWTAGWHSWS*GSGQSGTPPQGWTG
Trigger: ACCTGTCCAGCCCTGAGGAGGTGTTCCACTCTGGCCACTCCCGCAACTCCAGCTATGCCAGCCAGCAGTCCAAGATCTCCGGCTACAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300434.3
ENST00000373084.8
ENST00000373095.6
ENST00000465821.5
CDS CCA 90 bp GAGGGAGTGTGGGCTCCTGGCTGGCGGAAGCCCAGAAGGGTAACTTaGCAAAAGTTGGAGAGGGAGACAGATAAAGCCCCTGGGCCAGCC +
Preference number: 5 (lower is better)
Translates to: EGVWAPGWRKPRRVT*QKLERETDKAPGPA
Trigger: GGCTGGCCCAGGGGCTTTATCTGTCTCCCTCTCCAACTTTTGCCAAGTTACCCTTCTGGGCTTCCGCCAGCCAGGAGCCCACACTCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300434.3
ENST00000373084.8
CDS CCA 90 bp AGCTGGAGTTGCGGGAGTGGCCAGAGTGGAACACCTCCTCAGGGCTaGACAGGTTCTGGTCGGGTTCCTCTGGCAGCCCTTAAGGATGGA +
Preference number: 5 (lower is better)
Translates to: SWSCGSGQSGTPPQG*TGSGRVPLAALKDG
Trigger: TCCATCCTTAAGGGCTGCCAGAGGAACCCGACCAGAACCTGTCCAGCCCTGAGGAGGTGTTCCACTCTGGCCACTCCCGCAACTCCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300434.3
CDS-3UTR CAA 90 bp GGGGGTGAGCATGTGCAAAGTGCAGGCTGCAAGGCAGCGGGAGGACATTTGCCGGTCGATGGTGGCGTCTaGAAGCAGGGATCTCCAGAG +
Preference number: 5 (lower is better)
Translates to: GGEHVQSAGCKAAGGHLPVDGGV*KQGSPE
Trigger: CTCTGGAGATCCCTGCTTCAAGACGCCACCATCGAC...CGGCAAATGTCCTCCCGCTGCCTTGCAGCCTGCACTTTGCACATGCTCACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CAA 90 bp CTGGTCTGGAGGAGTCTCCCCAACAGCGCCAAAGCTGGCTGTTTTCCACCCAAAGACCCAGTCAGGGAGTaGGTGCTGCTGCCCCCACTG +
Preference number: 5 (lower is better)
Translates to: LVWRSLPNSAKAGCFPPKDPVRE*VLLPPL
Trigger: CAGTGGGGGCAGCAGCACCAACTCCCTGACTGGGTC...TTTGGGTGGAAAACAGCCAGCTTTGGCGCTGTTGGGGAGACTCCTCCAGACCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CAA 90 bp AGGAAGGCTGAGGCTTTTCTGGTAAGGAAGCCAGCTCCGGACCAGTCCAGCCACACGAACAGCCGGAGGTaGCTGTCCTCGGTGTTGCTG +
Preference number: 5 (lower is better)
Translates to: RKAEAFLVRKPAPDQSSHTNSRR*LSSVLL
Trigger: CAGCAACACCGAGGACAGCAACCTCCGGCTGTTCGT...GTGGCTGGACTGGTCCGGAGCTGGCTTCCTTACCAGAAAAGCCTCAGCCTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CAA 90 bp GCCAGGGAGTTCCAAGACCAAGAAGCCCAACTCTCACCAGCGGGGGCAGATGGGGGGCAGAGAAGGACTTaGCTTGCTCCAACCTTCCTG +
Preference number: 5 (lower is better)
Translates to: AREFQDQEAQLSPAGADGGQRRT*LAPTFL
Trigger: CAGGAAGGTTGGAGCAAGCAAAGTCCTTCTCTGCCC...CCCATCTGCCCCCGCTGGTGAGAGTTGGGCTTCTTGGTCTTGGAACTCCCTGGC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CAA 90 bp GCAAGGGAACAACGGAGCAAGGCCCTGCTGCTAAGACGTGACCAAAGCCAGTGCGGGATGGAGATGGACTaGGCAGTCGATGGTGGCGTC +
Preference number: 5 (lower is better)
Translates to: AREQRSKALLLRRDQSQCGMEMD*AVDGGV
Trigger: GACGCCACCATCGACTGCCAAGTCCATCTCCATCCC...GCACTGGCTTTGGTCACGTCTTAGCAGCAGGGCCTTGCTCCGTTGTTCCCTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS TCA 90 bp CAGGTGAGAGACAGGTCAGCATGTCCCCCTCGATACCCCATTTCCTaGGCGCTCCACTGGACCAGGCCTCTGGAGGTGTTTCACAAGCAG +
Preference number: 5 (lower is better)
Translates to: QVRDRSACPPRYPIS*ALHWTRPLEVFHKQ
Trigger: CTGCTTGTGAAACACCTCCAGAGGCCTGGTCCAGTGGAGCGCTCAGGAAATGGGGTATCGAGGGGGACATGCTGACCTGTCTCTCACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465821.5
CDS CCA 90 bp AGCCGGAGGTTGCTGTCCTCGGTGTTGCTGCCATCTGTGAAATCCTaGCTCTGCACGATCTTCTCCACGATGGCATCCGCATCGATCCGC +
Preference number: 5 (lower is better)
Translates to: SRRLLSSVLLPSVKS*LCTIFSTMASASIR
Trigger: GCGGATCGATGCGGATGCCATCGTGGAGAAGATCGTGCAGAGCCAGGATTTCACAGATGGCAGCAACACCGAGGACAGCAACCTCCGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300434.3
ENST00000373084.8
ENST00000373095.6
ENST00000465821.5
CDS-3UTR CAA 90 bp GGGGGTGAGCATGTGCAAAGTGCAGGCTGCAAGGCAGCGGGAGGACATTTGCCGGCAAGTTACAAGGACTaGGGGGAAAGTGCTGAGAGC +
Preference number: 5 (lower is better)
Translates to: GGEHVQSAGCKAAGGHLPASYKD*GESAES
Trigger: GCTCTCAGCACTTTCCCCCAAGTCCTTGTAACTTGC...CGGCAAATGTCCTCCCGCTGCCTTGCAGCCTGCACTTTGCACATGCTCACCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CAA 90 bp CTCCCCATCTTCTGGGGGCCAATTCGTCTGGACACTGTGCGGTCAGCTTCCTTTAAGGGGCAGGAGAGTTaGTCCAGGGACTGGCTGGCA +
Preference number: 5 (lower is better)
Translates to: LPIFWGPIRLDTVRSASFKGQES*SRDWLA
Trigger: TGCCAGCCAGTCCCTGGACAAACTCTCCTGCCCCTT...AAAGGAAGCTGACCGCACAGTGTCCAGACGAATTGGCCCCCAGAAGATGGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CAA 90 bp TGCCTGGCCTGCCCTCTAGTGGTTCAGAGGAGAATATTCACAGTGGTGCCTGGGCCGCCTTTCAGCTCCTaGCGCACAGACACACGGAAG +
Preference number: 5 (lower is better)
Translates to: CLACPLVVQRRIFTVVPGPPFSS*RTDTRK
Trigger: CTTCCGTGTGTCTGTGCGCAAGGAGCTGAAAGGCGG...CCCAGGCACCACTGTGAATATTCTCCTCTGAACCACTAGAGGGCAGGCCAGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373095.6
CDS GCA 90 bp AGGTTGCTGTCCTCGGTGTTGCTGCCATCTGTGAAATCCTGGCTCTaGACGATCTTCTCCACGATGGCATCCGCATCGATCCGCGTGTCG +
Preference number: 5 (lower is better)
Translates to: RLLSSVLLPSVKSWL*TIFSTMASASIRVS
Trigger: CGACACGCGGATCGATGCGGATGCCATCGTGGAGAAGATCGTGCAGAGCCAGGATTTCACAGATGGCAGCAACACCGAGGACAGCAACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300434.3
ENST00000373084.8
ENST00000373095.6
ENST00000465821.5
CDS CCA 90 bp TTCTCCAGCCCGGACACCTGCTCCTCAATGGCTTTCAATCACAACTaGCTCGTAGACCCCAGAAGAGACCCTGGTGGCAAGCTGGATGCC +
Preference number: 5 (lower is better)
Translates to: FSSPDTCSSMAFNHN*LVDPRRDPGGKLDA
Trigger: GGCATCCAGCTTGCCACCAGGGTCTCTTCTGGGGTCTACGAGCCAGTTGTGATTGAAAGCCATTGAGGAGCAGGTGTCCGGGCTGGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300434.3
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CAA 90 bp CCCTCTAGTGGTTCAGAGGAGAATATTCACAGTGGTGCCTGGGCCTTGGTGGGCAGTGACCAGGAGTCCTaGGGAAGGAGCTCAGGGAAG +
Preference number: 5 (lower is better)
Translates to: PSSGSEENIHSGAWALVGSDQES*GRSSGK
Trigger: CTTCCCTGAGCTCCTTCCCAAGGACTCCTGGTCACT...GCCCACCAAGGCCCAGGCACCACTGTGAATATTCTCCTCTGAACCACTAGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CAA 90 bp TGCAGGAAAACCAGCTGCTCAGGACCCAGCCCTGGGCAGAGGGCACGGTCGGTGCAAAGCCCCAGAACTTaGAATGAGAGGCAAATCTAC +
Preference number: 5 (lower is better)
Translates to: CRKTSCSGPSPGQRARSVQSPRT*NERQIY
Trigger: GTAGATTTGCCTCTCATTCAAAGTTCTGGGGCTTTG...CACCGACCGTGCCCTCTGCCCAGGGCTGGGTCCTGAGCAGCTGGTTTTCCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CAA 90 bp CTGGCTGGCAGCCAGAACCCACCTTCAAGCAAGTTACAAGGACTTGGGGGAAAGAGTGACCAGGAGTCCTaGGGAAGGAGCTCAGGGAAG +
Preference number: 5 (lower is better)
Translates to: LAGSQNPPSSKLQGLGGKSDQES*GRSSGK
Trigger: CTTCCCTGAGCTCCTTCCCAAGGACTCCTGGTCACT...CTTTCCCCCAAGTCCTTGTAACTTGCTTGAAGGTGGGTTCTGGCTGCCAGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CAA 90 bp CAGAGGAGAACATGGACACCCTCCATCCTGATAGACATGCCATGTGGTCAGTTTAGGAGCCCTTCCCCCTaGCCCAGAACGGGGGATGCT +
Preference number: 5 (lower is better)
Translates to: QRRTWTPSILIDMPCGQFRSPSP*PRTGDA
Trigger: AGCATCCCCCGTTCTGGGCAAGGGGGAAGGGCTCCT...AAACTGACCACATGGCATGTCTATCAGGATGGAGGGTGTCCATGTTCTCCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373095.6
CDS-3UTR CAA 90 bp TGCCTGGCCTGCCCTCTAGTGGTTCAGAGGAGAATATTCACAGTGGTGCCTGGGGCCCAGAAGGGTAACTaGGCAAAAGTTGGAGAGGGA +
Preference number: 5 (lower is better)
Translates to: CLACPLVVQRRIFTVVPGAQKGN*AKVGEG
Trigger: TCCCTCTCCAACTTTTGCCAAGTTACCCTTCTGGGC...CCCAGGCACCACTGTGAATATTCTCCTCTGAACCACTAGAGGGCAGGCCAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373084.8
CDS-3UTR CAA 90 bp TGCCTGGCCTGCCCTCTAGTGGTTCAGAGGAGAATATTCACAGTGGTGCCTGGGTTGCTGTCCTCGGTGTaGCTGCCATCTGTGAAATCC +
Preference number: 5 (lower is better)
Translates to: CLACPLVVQRRIFTVVPGLLSSV*LPSVKS
Trigger: GGATTTCACAGATGGCAGCAACACCGAGGACAGCAA...CCCAGGCACCACTGTGAATATTCTCCTCTGAACCACTAGAGGGCAGGCCAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CAA 90 bp CCCTCAGCCACAGGCATCTCTACATTTAGGAGCCGCTGCATGTCCTCAGCCAGAAGAGAAGGACTTTGCTaGCTCCAACCTTCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: PSATGISTFRSRCMSSARREGLC*LQPSCR
Trigger: CCTGCAGGAAGGTTGGAGCAAGCAAAGTCCTTCTCT...TCTGGCTGAGGACATGCAGCGGCTCCTAAATGTAGAGATGCCTGTGGCTGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CAA 90 bp CTGCCTGGCCTGCCCTCTAGTGGTTCAGAGGAGAATATTCACAGTGGTGCCTGGGCAAGTTACAAGGACTaGGGGGAAAGTGCTGAGAGC +
Preference number: 5 (lower is better)
Translates to: LPGLPSSGSEENIHSGAWASYKD*GESAES
Trigger: GCTCTCAGCACTTTCCCCCAAGTCCTTGTAACTTGC...CCAGGCACCACTGTGAATATTCTCCTCTGAACCACTAGAGGGCAGGCCAGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CAA 90 bp TCTGGAGGAGTCTCCCCAACAGCGCCAAAGCTGGCTGTTTTCCACCCAAAGCCCACCTTAAGGATGGAGTaGTCCTGGCGAGTGTTCTTC +
Preference number: 5 (lower is better)
Translates to: SGGVSPTAPKLAVFHPKPTLRME*SWRVFF
Trigger: GAAGAACACTCGCCAGGACAACTCCATCCTTAAGGT...GGGCTTTGGGTGGAAAACAGCCAGCTTTGGCGCTGTTGGGGAGACTCCTCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CAA 90 bp AACAAACACAGCCCACTCAAGCAGTGGTGGCAACATTCTGTTAGAAAGGAGGGGACGAACAGCCGGAGGTaGCTGTCCTCGGTGTTGCTG +
Preference number: 5 (lower is better)
Translates to: NKHSPLKQWWQHSVRKEGTNSRR*LSSVLL
Trigger: CAGCAACACCGAGGACAGCAACCTCCGGCTGTTCGT...CCCCTCCTTTCTAACAGAATGTTGCCACCACTGCTTGAGTGGGCTGTGTTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373095.6
CDS-3UTR CAA 90 bp CTGCCTGGCCTGCCCTCTAGTGGTTCAGAGGAGAATATTCACAGTGGTGCCTGGGGCGAGGAGGCAATATaGAACCGTGAACTCAAGAAG +
Preference number: 5 (lower is better)
Translates to: LPGLPSSGSEENIHSGAWGEEAI*NRELKK
Trigger: CTTCTTGAGTTCACGGTTCAATATTGCCTCCTCGCC...CCAGGCACCACTGTGAATATTCTCCTCTGAACCACTAGAGGGCAGGCCAGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CAA 90 bp AGGAAGGCTGAGGCTTTTCTGGTAAGGAAGCCAGCTCCGGACCAGTCCAGCCACCCAGCATCAATTTGGTaGTGGCCAAATTCTCAGTCC +
Preference number: 5 (lower is better)
Translates to: RKAEAFLVRKPAPDQSSHPASIW*WPNSQS
Trigger: GGACTGAGAATTTGGCCACAACCAAATTGATGCTGG...GTGGCTGGACTGGTCCGGAGCTGGCTTCCTTACCAGAAAAGCCTCAGCCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CAA 90 bp CCCACATGGGGACAAGGCCAGGCTTTCTGGCCTCTGGTTCCAGCCAGCATCAATCCAGCATCAATTTGGTaGTGGCCAAATTCTCAGTCC +
Preference number: 5 (lower is better)
Translates to: PTWGQGQAFWPLVPASINPASIW*WPNSQS
Trigger: GGACTGAGAATTTGGCCACAACCAAATTGATGCTGG...ATTGATGCTGGCTGGAACCAGAGGCCAGAAAGCCTGGCCTTGTCCCCATGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CAA 90 bp GCAAGGGAACAACGGAGCAAGGCCCTGCTGCTAAGACGTGACCAAAGCCAGTGCCCAGCCAGCATCAATTaGGTTGTGGCCAAATTCTCA +
Preference number: 5 (lower is better)
Translates to: AREQRSKALLLRRDQSQCPASIN*VVAKFS
Trigger: TGAGAATTTGGCCACAACCAAATTGATGCTGGCTGG...GCACTGGCTTTGGTCACGTCTTAGCAGCAGGGCCTTGCTCCGTTGTTCCCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CAA 90 bp CCCACTGGGAAAGCACACCCCTTAAAGGAGCCCTTCCCCCTTGCCCAGAACGGGGATTCCAAACTGACATaGCATAGACCAACTCCTTTC +
Preference number: 5 (lower is better)
Translates to: PTGKAHPLKEPFPLAQNGDSKLT*HRPTPF
Trigger: GAAAGGAGTTGGTCTATGCAATGTCAGTTTGGAATC...CCCGTTCTGGGCAAGGGGGAAGGGCTCCTTTAAGGGGTGTGCTTTCCCAGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CAA 90 bp TGGGAATTCACTGAGCTCAAGGGGACAAGAGGGCTGAGGACAGGGCTCCCACATACCTTAAGGATGGAGTaGTCCTGGCGAGTGTTCTTC +
Preference number: 5 (lower is better)
Translates to: WEFTELKGTRGLRTGLPHTLRME*SWRVFF
Trigger: GAAGAACACTCGCCAGGACAACTCCATCCTTAAGGT...ATGTGGGAGCCCTGTCCTCAGCCCTCTTGTCCCCTTGAGCTCAGTGAATTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CAA 90 bp CTGGCTGGCAGCCAGAACCCACCTTCAAGCAAGTTACAAGGACTTGGGGGAAAGGGCGAGGAGGCAATATaGAACCGTGAACTCAAGAAG +
Preference number: 5 (lower is better)
Translates to: LAGSQNPPSSKLQGLGGKGEEAI*NRELKK
Trigger: CTTCTTGAGTTCACGGTTCAATATTGCCTCCTCGCC...CTTTCCCCCAAGTCCTTGTAACTTGCTTGAAGGTGGGTTCTGGCTGCCAGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CAA 90 bp CCCACATGGGGACAAGGCCAGGCTTTCTGGCCTCTGGTTCCAGCCAGCATCAATGTAACTTGGCAAAAGTaGGAGAGGGAGACAGATAAA +
Preference number: 5 (lower is better)
Translates to: PTWGQGQAFWPLVPASINVTWQK*ERETDK
Trigger: TTTATCTGTCTCCCTCTCCAACTTTTGCCAAGTTAC...ATTGATGCTGGCTGGAACCAGAGGCCAGAAAGCCTGGCCTTGTCCCCATGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373084.8
CDS-3UTR CAA 90 bp AACAAACACAGCCCACTCAAGCAGTGGTGGCAACATTCTGTTAGAAAGGAGGGGAGAGAAGGACTTTGCTaGCTCCAACCTTCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: NKHSPLKQWWQHSVRKEGREGLC*LQPSCR
Trigger: CCTGCAGGAAGGTTGGAGCAAGCAAAGTCCTTCTCT...CCCCTCCTTTCTAACAGAATGTTGCCACCACTGCTTGAGTGGGCTGTGTTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373095.6
CDS-3UTR CAA 90 bp AGGCCAGGCTTTCTGGCCTCTGGTTCCAGCCAGCATCAATTTGGTTGTGGCCAACAAAGCCCCAGAACTTaGAATGAGAGGCAAATCTAC +
Preference number: 5 (lower is better)
Translates to: RPGFLASGSSQHQFGCGQQSPRT*NERQIY
Trigger: GTAGATTTGCCTCTCATTCAAAGTTCTGGGGCTTTG...TTGGCCACAACCAAATTGATGCTGGCTGGAACCAGAGGCCAGAAAGCCTGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CAA 90 bp CCCTCTAGTGGTTCAGAGGAGAATATTCACAGTGGTGCCTGGGCCTTGGTGGGCGATTCCAAACTGACATaGCATAGACCAACTCCTTTC +
Preference number: 5 (lower is better)
Translates to: PSSGSEENIHSGAWALVGDSKLT*HRPTPF
Trigger: GAAAGGAGTTGGTCTATGCAATGTCAGTTTGGAATC...GCCCACCAAGGCCCAGGCACCACTGTGAATATTCTCCTCTGAACCACTAGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS-3UTR CAA 90 bp AAAGTTCCTCATGGAATGATACAGGTCTGGACTCCAGAGAAAGCAGGACTCTTCGTCGATGGTGGCGTCTaGAAGCAGGGATCTCCAGAG +
Preference number: 5 (lower is better)
Translates to: KVPHGMIQVWTPEKAGLFVDGGV*KQGSPE
Trigger: CTCTGGAGATCCCTGCTTCAAGACGCCACCATCGAC...GAAGAGTCCTGCTTTCTCTGGAGTCCAGACCTGTATCATTCCATGAGGAACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS CCA 90 bp GGCCTGGAGAGAGGAAAGGGGACAGAAACTGGCCCTTTTGCTCTGTaGACTTCTGTACCATTTATATTGCAACAACCATATGCTGCCTTT +
Preference number: 5 (lower is better)
Translates to: GLERGKGTETGPFAL*TSVPFILQQPYAAF
Trigger: AAAGGCAGCATATGGTTGTTGCAATATAAATGGTACAGAAGTCCACAGAGCAAAAGGGCCAGTTTCTGTCCCCTTTCCTCTCTCCAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493175.1
CDS-3UTR CAA 90 bp AAAGTTCCTCATGGAATGATACAGGTCTGGACTCCAGAGAAAGCAGGACTCTTCTGCCATGTGGTCAGTTaGTGCGGTAAACAGGAAAAA +
Preference number: 5 (lower is better)
Translates to: KVPHGMIQVWTPEKAGLFCHVVS*CGKQEK
Trigger: TTTTTCCTGTTTACCGCACAAACTGACCACATGGCA...GAAGAGTCCTGCTTTCTCTGGAGTCCAGACCTGTATCATTCCATGAGGAACTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373095.6
CDS GCA 72 bp GAGGTGCGGGGCTGCGCGCGAGCGGCCGCGCTGGCTTaGAGCATCCCGAGACGCGATGTCCGGGGAGCTCAC +
Preference number: 6 (lower is better)
Translates to: EVRGCARAAALA*SIPRRDVRGAH
Trigger: GTGAGCTCCCCGGACATCGCGTCTCGGGATGCTGCAAGCCAGCGCGGCCGCTCGCGCGCAGCCCCGCACCTC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373095.6
CDS CAA 72 bp GGAGGTGCGGGGCTGCGCGCGAGCGGCCGCGCTGGCTaGCAGCATCCCGAGACGCGATGTCCGGGGAGCTCA +
Preference number: 6 (lower is better)
Translates to: GGAGLRASGRAG*QHPETRCPGSS
Trigger: TGAGCTCCCCGGACATCGCGTCTCGGGATGCTGCAAGCCAGCGCGGCCGCTCGCGCGCAGCCCCGCACCTCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373095.6
CDS TCA 72 bp GGAGACGGCGGAGATCGGAGTCCGGGGCCCCAGGTCTaGGAGATCCACCAGTCCAGTTCGCGGGCCGGCGGG +
Preference number: 6 (lower is better)
Translates to: GDGGDRSPGPQV*EIHQSSSRAGG
Trigger: CCCGCCGGCCCGCGAACTGGACTGGTGGATCTCTCAGACCTGGGGCCCCGGACTCCGATCTCCGCCGTCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373095.6
ENST00000494606.1
CDS GCA 72 bp CCTCCACGGTCATGCCAAGGCCCCCAGAGGCGCTGCTaGTGGTGGACGTGTTGCGGCGGTGCGTCAGGTCTG +
Preference number: 6 (lower is better)
Translates to: PPRSCQGPQRRC*WWTCCGGASGL
Trigger: CAGACCTGACGCACCGCCGCAACACGTCCACCAGCAGCAGCGCCTCTGGGGGCCTTGGCATGACCGTGGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300434.3
ENST00000373084.8
ENST00000373095.6
ENST00000465821.5
CDS GCA 72 bp GAGTCCTTCTTCCGCCTGAAAGAGCGATCGGACAGATaGAGGGGCCGGGGTGGCCGCGGCGGCTTCTCCGGG +
Preference number: 6 (lower is better)
Translates to: ESFFRLKERSDR*RGRGGRGGFSG
Trigger: CCCGGAGAAGCCGCCGCGGCCACCCCGGCCCCTGCATCTGTCCGATCGCTCTTTCAGGCGGAAGAAGGACTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300434.3
ENST00000373084.8
ENST00000373095.6
ENST00000465821.5
CDS TCA 72 bp ACCCCCTCCTCAAAACACCAGAGCCGGATCCCGCCCTaGTGGTGGCGGAGACGGCGGAGATCGGAGTCCGGG +
Preference number: 6 (lower is better)
Translates to: TPSSKHQSRIPP*WWRRRRRSESG
Trigger: CCCGGACTCCGATCTCCGCCGTCTCCGCCACCATCAGGGCGGGATCCGGCTCTGGTGTTTTGAGGAGGGGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373095.6
ENST00000494606.1
CDS CCA 72 bp CCACGGTCATGCCAAGGCCCCCAGAGGCGCTGCTGCTaGTGGACGTGTTGCGGCGGTGCGTCAGGTCTGAGA +
Preference number: 6 (lower is better)
Translates to: PRSCQGPQRRCC*WTCCGGASGLR
Trigger: TCTCAGACCTGACGCACCGCCGCAACACGTCCACCAGCAGCAGCGCCTCTGGGGGCCTTGGCATGACCGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300434.3
ENST00000373084.8
ENST00000373095.6
ENST00000465821.5
CDS CCA 72 bp GACCCCTCCCTAAGCCTGCCCTACCTGGTGGCAAGCTaGATGCCGCTCAGCGTGGCAGAGCCATCGCGGCTC +
Preference number: 6 (lower is better)
Translates to: DPSLSLPYLVAS*MPLSVAEPSRL
Trigger: GAGCCGCGATGGCTCTGCCACGCTGAGCGGCATCCAGCTTGCCACCAGGTAGGGCAGGCTTAGGGAGGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465821.5
CDS GCA 72 bp GGGACCCAGTCAGGGAGTTGGTGCTGCTGCCCCCACTaGTGGTCCCACCACCCTTACACGTCAGCTGCAGGG +
Preference number: 6 (lower is better)
Translates to: GTQSGSWCCCPH*WSHHPYTSAAG
Trigger: CCCTGCAGCTGACGTGTAAGGGTGGTGGGACCAGCAGTGGGGGCAGCAGCACCAACTCCCTGACTGGGTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS CCA 72 bp TGCCCTACCTGGTGGCAAGCTGGATGCCGCTCAGCGTaGCAGAGCCATCGCGGCTCACGAACAGCCGGAGGT +
Preference number: 6 (lower is better)
Translates to: CPTWWQAGCRSA*QSHRGSRTAGG
Trigger: ACCTCCGGCTGTTCGTGAGCCGCGATGGCTCTGCCACGCTGAGCGGCATCCAGCTTGCCACCAGGTAGGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465821.5
CDS CCA 72 bp AGTCTGTGGGGCCTGCAGAGCCCTTCCGGGCACATCTaGCTGTGCCACCCCATCCTCACGGTCACCTCGGCA +
Preference number: 6 (lower is better)
Translates to: SLWGLQSPSGHI*LCHPILTVTSA
Trigger: TGCCGAGGTGACCGTGAGGATGGGGTGGCACAGCCAGATGTGCCCGGAAGGGCTCTGCAGGCCCCACAGACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465821.5
CDS GCA 72 bp CGTAGACCCCAGAAGAGACCCTGGTGGCAAGCTGGATaGCGCTCAGCGTGGCAGAGCCATCGCGGCTCACGA +
Preference number: 6 (lower is better)
Translates to: RRPQKRPWWQAG*RSAWQSHRGSR
Trigger: TCGTGAGCCGCGATGGCTCTGCCACGCTGAGCGGCATCCAGCTTGCCACCAGGGTCTCTTCTGGGGTCTACG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300434.3
ENST00000373084.8
ENST00000373095.6
CDS CCA 72 bp TGGACGTGTTGCGGCGGTGCGTCAGGTCTGAGAGGCTaGAGGAGCGCGAGTGCTCTGTGCTGTAGCCGGAGA +
Preference number: 6 (lower is better)
Translates to: WTCCGGASGLRG*RSASALCCSRR
Trigger: TCTCCGGCTACAGCACAGAGCACTCGCGCTCCTCCAGCCTCTCAGACCTGACGCACCGCCGCAACACGTCCA
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300434.3
ENST00000373084.8
ENST00000373095.6
ENST00000465821.5
CDS CCA 72 bp AAGAGACCCTGGTGGCAAGCTGGATGCCGCTCAGCGTaGCAGAGCCATCGCGGCTCACGAACAGCCGGAGGT +
Preference number: 6 (lower is better)
Translates to: KRPWWQAGCRSA*QSHRGSRTAGG
Trigger: ACCTCCGGCTGTTCGTGAGCCGCGATGGCTCTGCCACGCTGAGCGGCATCCAGCTTGCCACCAGGGTCTCTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300434.3
ENST00000373084.8
ENST00000373095.6
CDS CCA 72 bp ACCCAGTCAGGGAGTTGGTGCTGCTGCCCCCACTGCTaGTCCCACCACCCTTACACGTCAGCTGCAGGGAGG +
Preference number: 6 (lower is better)
Translates to: TQSGSWCCCPHC*SHHPYTSAAGR
Trigger: CCTCCCTGCAGCTGACGTGTAAGGGTGGTGGGACCAGCAGTGGGGGCAGCAGCACCAACTCCCTGACTGGGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373084.8
ENST00000373095.6
CDS CCA 72 bp TGCGGGAGTGGCCAGAGTGGAACACCTCCTCAGGGCTaGACAGGTTCTGGTCGGGTTCCTCTGGCAGCCCTG +
Preference number: 6 (lower is better)
Translates to: CGSGQSGTPPQG*TGSGRVPLAAL
Trigger: CAGGGCTGCCAGAGGAACCCGACCAGAACCTGTCCAGCCCTGAGGAGGTGTTCCACTCTGGCCACTCCCGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373084.8
ENST00000373095.6
ENST00000465821.5
CDS GCA 72 bp ACTGTGGGAAACCACCGAACCTGTCCGTGCCCTCACTaGCCCAGGCTCCCAGGTGAGGTGGTGGTGTCCACA +
Preference number: 6 (lower is better)
Translates to: TVGNHRTCPCPH*PRLPGEVVVST
Trigger: TGTGGACACCACCACCTCACCTGGGAGCCTGGGGCAGTGAGGGCACGGACAGGTTCGGTGGTTTCCCACAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465821.5
CDS CCA 72 bp TCGTGTCATATCCCTCGAGCAGGCAGCAGCGCACCGTaGAGCCCGAGCCCGCAAACTCGGCCAGGTTCAAGT +
Preference number: 6 (lower is better)
Translates to: SCHIPRAGSSAP*SPSPQTRPGSS
Trigger: ACTTGAACCTGGCCGAGTTTGCGGGCTCGGGCTCCACGGTGCGCTGCTGCCTGCTCGAGGGATATGACACGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300434.3
ENST00000373084.8
ENST00000373095.6
ENST00000479828.1
CDS CCA 72 bp TGCGGGAGTGGCCAGAGTGGAACACCTCCTCAGGGCTaGACAGGTTCTGGTCGGGTTCCTCTGGCAGCCCTT +
Preference number: 6 (lower is better)
Translates to: CGSGQSGTPPQG*TGSGRVPLAAL
Trigger: AAGGGCTGCCAGAGGAACCCGACCAGAACCTGTCCAGCCCTGAGGAGGTGTTCCACTCTGGCCACTCCCGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300434.3
CDS CCA 72 bp TCCGCATCGATCCGCGTGTCGTCCACCCAGGTCGGGTaGCTCTCCACCGAGTCCTTCTTCCGCCTGAAAGAG +
Preference number: 6 (lower is better)
Translates to: SASIRVSSTQVG*LSTESFFRLKE
Trigger: CTCTTTCAGGCGGAAGAAGGACTCGGTGGAGAGCCACCCGACCTGGGTGGACGACACGCGGATCGATGCGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300434.3
ENST00000373084.8
ENST00000373095.6
ENST00000465821.5
CDS GCA 72 bp CGGAGATCTTGGACTGCTGGCTGGCATAGCTGGAGTTaGGGGAGTGGCCAGAGTGGAACACCTCCTCAGGGC +
Preference number: 6 (lower is better)
Translates to: RRSWTAGWHSWS*GSGQSGTPPQG
Trigger: GCCCTGAGGAGGTGTTCCACTCTGGCCACTCCCGCAACTCCAGCTATGCCAGCCAGCAGTCCAAGATCTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300434.3
ENST00000373084.8
ENST00000373095.6
ENST00000465821.5
CDS CCA 72 bp ACAAGATTTGGCGTTCAAGGCCAGGTGAGTGGACTGTaGGGACTCTGCTCTCACCCCCAAGCCCCAGCCGCC +
Preference number: 6 (lower is better)
Translates to: TRFGVQGQVSGL*GLCSHPQAPAA
Trigger: GGCGGCTGGGGCTTGGGGGTGAGAGCAGAGTCCCCACAGTCCACTCACCTGGCCTTGAACGCCAAATCTTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465821.5
CDS CCA 72 bp TGTGGCGACAAGATTTGGCGTTCAAGGCCAGGTGAGTaGACTGTGGGGACTCTGCTCTCACCCCCAAGCCCC +
Preference number: 6 (lower is better)
Translates to: CGDKIWRSRPGE*TVGTLLSPPSP
Trigger: GGGGCTTGGGGGTGAGAGCAGAGTCCCCACAGTCCACTCACCTGGCCTTGAACGCCAAATCTTGTCGCCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465821.5
CDS GCA 72 bp CACCCCATCCTCACGGTCACCTCGGCAGGGAGTCACTaGATCCTGCCCCACTTGACAGGTGAAGAAACTGAG +
Preference number: 6 (lower is better)
Translates to: HPILTVTSAGSH*ILPHLTGEETE
Trigger: CTCAGTTTCTTCACCTGTCAAGTGGGGCAGGATGCAGTGACTCCCTGCCGAGGTGACCGTGAGGATGGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465821.5
CDS GCA 72 bp GTGACACAGATAGTAAGCATCAGAGTCTGTGGGGCCTaGAGAGCCCTTCCGGGCACATCTGGCTGTGCCACC +
Preference number: 6 (lower is better)
Translates to: VTQIVSIRVCGA*RALPGTSGCAT
Trigger: GGTGGCACAGCCAGATGTGCCCGGAAGGGCTCTGCAGGCCCCACAGACTCTGATGCTTACTATCTGTGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465821.5
CDS CCA 72 bp CCAGAGTGGAACACCTCCTCAGGGCTGGACAGGTTCTaGTCGGGTTCCTCTGGCAGCCCTGAGCTGAGAATA +
Preference number: 6 (lower is better)
Translates to: PEWNTSSGLDRF*SGSSGSPELRI
Trigger: TATTCTCAGCTCAGGGCTGCCAGAGGAACCCGACCAGAACCTGTCCAGCCCTGAGGAGGTGTTCCACTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373084.8
ENST00000373095.6
ENST00000465821.5
CDS CCA 72 bp GCCCACAGTGACACAGATAGTAAGCATCAGAGTCTGTaGGGCCTGCAGAGCCCTTCCGGGCACATCTGGCTG +
Preference number: 6 (lower is better)
Translates to: AHSDTDSKHQSL*GLQSPSGHIWL
Trigger: CAGCCAGATGTGCCCGGAAGGGCTCTGCAGGCCCCACAGACTCTGATGCTTACTATCTGTGTCACTGTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465821.5
CDS CAA 72 bp GGCTGGCGGAAGCCCAGAAGGGTAACTTGGCAAAAGTaGGAGAGGGAGACAGATAAAGCCCCTGGGCCAGCC +
Preference number: 6 (lower is better)
Translates to: GWRKPRRVTWQK*ERETDKAPGPA
Trigger: GGCTGGCCCAGGGGCTTTATCTGTCTCCCTCTCCAACTTTTGCCAAGTTACCCTTCTGGGCTTCCGCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300434.3
ENST00000373084.8
CDS TCA 72 bp GCCGGAGGTTGCTGTCCTCGGTGTTGCTGCCATCTGTaGAATCCTGGCTCTGCACGATCTTCTCCACGATGG +
Preference number: 6 (lower is better)
Translates to: AGGCCPRCCCHL*NPGSARSSPRW
Trigger: CCATCGTGGAGAAGATCGTGCAGAGCCAGGATTTCACAGATGGCAGCAACACCGAGGACAGCAACCTCCGGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300434.3
ENST00000373084.8
ENST00000373095.6
ENST00000465821.5
CDS TCA 72 bp CCATGTGCTGAGCCCTGCACCAGGCATTGCTGGAGGTaGCCTTGTGAACTGTGGGAAACCACCGAACCTGTC +
Preference number: 6 (lower is better)
Translates to: PCAEPCTRHCWR*PCELWETTEPV
Trigger: GACAGGTTCGGTGGTTTCCCACAGTTCACAAGGTCACCTCCAGCAATGCCTGGTGCAGGGCTCAGCACATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465821.5
CDS CCA 72 bp ATGACAGGCCCAGGGTCACACTGTGGCGACAAGATTTaGCGTTCAAGGCCAGGTGAGTGGACTGTGGGGACT +
Preference number: 6 (lower is better)
Translates to: MTGPGSHCGDKI*RSRPGEWTVGT
Trigger: AGTCCCCACAGTCCACTCACCTGGCCTTGAACGCCAAATCTTGTCGCCACAGTGTGACCCTGGGCCTGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465821.5
CDS GCA 72 bp AACTGTCGTTCCCGCAACTTTGGTCCCATCTACCCCTaGCATCTGTGGATGCTGTGTAGGCAGCAGCCTGCA +
Preference number: 6 (lower is better)
Translates to: NCRSRNFGPIYP*HLWMLCRQQPA
Trigger: TGCAGGCTGCTGCCTACACAGCATCCACAGATGGCAGGGGTAGATGGGACCAAAGTTGCGGGAACGACAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465821.5
CDS GCA 72 bp GTTAACCAGCCCTGTGTTGCAAAGGGGCTAAAACCGTaGCCCAGCGATGGTAAGTCCCTTGCCCACAGTGAC +
Preference number: 6 (lower is better)
Translates to: VNQPCVAKGLKP*PSDGKSLAHSD
Trigger: GTCACTGTGGGCAAGGGACTTACCATCGCTGGGGCACGGTTTTAGCCCCTTTGCAACACAGGGCTGGTTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465821.5
CDS CCA 72 bp TGGGCTCCTGGCTGGCGGAAGCCCAGAAGGGTAACTTaGCAAAAGTTGGAGAGGGAGACAGATAAAGCCCCT +
Preference number: 6 (lower is better)
Translates to: WAPGWRKPRRVT*QKLERETDKAP
Trigger: AGGGGCTTTATCTGTCTCCCTCTCCAACTTTTGCCAAGTTACCCTTCTGGGCTTCCGCCAGCCAGGAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300434.3
ENST00000373084.8
CDS CCA 72 bp GGGTTCCTCTGGCAGCCCTTAAGGATGGAGTTGTCCTaGCGAGTGTTCTTCGTGTCATATCCCTCGAGCAGG +
Preference number: 6 (lower is better)
Translates to: GFLWQPLRMELS*RVFFVSYPSSR
Trigger: CCTGCTCGAGGGATATGACACGAAGAACACTCGCCAGGACAACTCCATCCTTAAGGGCTGCCAGAGGAACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300434.3
CDS CCA 72 bp CCGGACACCTGCTCCTCAATGGCTTTCAATCACAACTaGCTCGTAGACCCCAGAAGAGACCCTGGTGGCAAG +
Preference number: 6 (lower is better)
Translates to: PDTCSSMAFNHN*LVDPRRDPGGK
Trigger: CTTGCCACCAGGGTCTCTTCTGGGGTCTACGAGCCAGTTGTGATTGAAAGCCATTGAGGAGCAGGTGTCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300434.3
ENST00000373084.8
ENST00000373095.6
CDS CCA 72 bp CCGGACACCTGCTCCTCAATGGCTTTCAATCACAACTaGCTCGTAGACCCCAGAAGAGACCCTGCAGGTGAG +
Preference number: 6 (lower is better)
Translates to: PDTCSSMAFNHN*LVDPRRDPAGE
Trigger: CTCACCTGCAGGGTCTCTTCTGGGGTCTACGAGCCAGTTGTGATTGAAAGCCATTGAGGAGCAGGTGTCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465821.5
CDS GCA 72 bp TCCTCGGTGTTGCTGCCATCTGTGAAATCCTGGCTCTaGACGATCTTCTCCACGATGGCATCCGCATCGATC +
Preference number: 6 (lower is better)
Translates to: SSVLLPSVKSWL*TIFSTMASASI
Trigger: GATCGATGCGGATGCCATCGTGGAGAAGATCGTGCAGAGCCAGGATTTCACAGATGGCAGCAACACCGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300434.3
ENST00000373084.8
ENST00000373095.6
ENST00000465821.5
CDS CCA 72 bp TTGCTGTCCTCGGTGTTGCTGCCATCTGTGAAATCCTaGCTCTGCACGATCTTCTCCACGATGGCATCCGCA +
Preference number: 6 (lower is better)
Translates to: LLSSVLLPSVKS*LCTIFSTMASA
Trigger: TGCGGATGCCATCGTGGAGAAGATCGTGCAGAGCCAGGATTTCACAGATGGCAGCAACACCGAGGACAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300434.3
ENST00000373084.8
ENST00000373095.6
ENST00000465821.5
CDS CAA 90 bp AGCAGCCCGCCTGTGGGAAGCTCATTCGCTCACTCGCTCATTCATTaGGTTAGCCAAAGCACATGGAGAGCCAGGCACATAGTCAACATG +
Preference number: 6 (lower is better)
Translates to: SSPPVGSSFAHSLIH*VSQSTWRARHIVNM
Trigger: CATGTTGACTATGTGCCTGGCTCTCCATGTGCTTTGGCTAACCAAATGAATGAGCGAGTGAGCGAATGAGCTTCCCACAGGCGGGCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465821.5
CDS CAA 72 bp CCTGTGGGAAGCTCATTCGCTCACTCGCTCATTCATTaGGTTAGCCAAAGCACATGGAGAGCCAGGCACATA +
Preference number: 6 (lower is better)
Translates to: PVGSSFAHSLIH*VSQSTWRARHI
Trigger: TATGTGCCTGGCTCTCCATGTGCTTTGGCTAACCAAATGAATGAGCGAGTGAGCGAATGAGCTTCCCACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465821.5
CDS CCA 72 bp AACATACCAATGGTGACCTTAAGGATGGAGTTGTCCTaGCGAGTGTTCTTCGTGTCATATCCCTCGAGCAGG +
Preference number: 6 (lower is better)
Translates to: NIPMVTLRMELS*RVFFVSYPSSR
Trigger: CCTGCTCGAGGGATATGACACGAAGAACACTCGCCAGGACAACTCCATCCTTAAGGTCACCATTGGTATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373084.8
ENST00000373095.6
ENST00000479828.1
CDS CAA 72 bp GGCCCTTTTGCTCTGTGGACTTCTGTACCATTTATATaGCAACAACCATATGCTGCCTTTATATTGAGTGCA +
Preference number: 6 (lower is better)
Translates to: GPFALWTSVPFI*QQPYAAFILSA
Trigger: TGCACTCAATATAAAGGCAGCATATGGTTGTTGCAATATAAATGGTACAGAAGTCCACAGAGCAAAAGGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493175.1
CDS CAA 90 bp ACAGAAACTGGCCCTTTTGCTCTGTGGACTTCTGTACCATTTATATaGCAACAACCATATGCTGCCTTTATATTGAGTGCAAAGACCATC +
Preference number: 6 (lower is better)
Translates to: TETGPFALWTSVPFI*QQPYAAFILSAKTI
Trigger: GATGGTCTTTGCACTCAATATAAAGGCAGCATATGGTTGTTGCAATATAAATGGTACAGAAGTCCACAGAGCAAAAGGGCCAGTTTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493175.1