RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAIM2 (Homo sapiens)

Ensembl gene IDs: ENSG00000135472

Ensembl transcript IDs: ENST00000320634.8, ENST00000547871.1, ENST00000550195.5, ENST00000550635.6, ENST00000550890.5, ENST00000552669.5, ENST00000552863.5

Found 419 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CACAGGCGCCCCTCTGGGGGTTGGAGGGCTGACGCACACCCTGCCTaGGATCCCAGCCGCCTGGAAGCTGATAAGGAGCCCTGGCCTCAT +
Preference number: 1 (lower is better)
Translates to: HRRPSGGWRADAHPA*DPSRLEADKEPWPH
Trigger: ATGAGGCCAGGGCTCCTTATCAGCTTCCAGGCGGCTGGGATCTCAGGCAGGGTGTGCGTCAGCCCTCCAACCCCCAGAGGGGCGCCTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR CCA 90 bp GTGGACAGCAGGAGTGTCGGGGGTGTGGCAGCTGGCCTGGGTCCCTaGAGCTGTGTCTGCCCTCAGGGACTCAGGAGAACGGCTCAGGGA +
Preference number: 1 (lower is better)
Translates to: VDSRSVGGVAAGLGP*SCVCPQGLRRTAQG
Trigger: TCCCTGAGCCGTTCTCCTGAGTCCCTGAGGGCAGACACAGCTCCAGGGACCCAGGCCAGCTGCCACACCCCCGACACTCCTGCTGTCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR CCA 90 bp GCCTGTGGCAGCTGCCTGGCGGGTGGAGAAGTGAGTGAGAGGATGTaGGTCTCGGTCCTGCAACCCCAAATGCCTCCCAGGTGGACGCGG +
Preference number: 1 (lower is better)
Translates to: ACGSCLAGGEVSERM*VSVLQPQMPPRWTR
Trigger: CCGCGTCCACCTGGGAGGCATTTGGGGTTGCAGGACCGAGACCCACATCCTCTCACTCACTTCTCCACCCGCCAGGCAGCTGCCACAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR CCA 90 bp CCCAGGACATCAGGGCCTGACCACCCACCTCTCTGCGCTCTCATGTaGTCTCATTCCGGCCCCCACCCAGGCCCAGGGGCAAGCGTGATA +
Preference number: 1 (lower is better)
Translates to: PRTSGPDHPPLCALM*SHSGPHPGPGASVI
Trigger: TATCACGCTTGCCCCTGGGCCTGGGTGGGGGCCGGAATGAGACCACATGAGAGCGCAGAGAGGTGGGTGGTCAGGCCCTGATGTCCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR TCA 90 bp GGGGCTAACCCTCTGGAACTGAGGCCAGAGATGAGGAGAGGAAACTaGGGGGCCCGGAGGAGAGGAGGTGGAGGAGGGTGGGAACCGGGT +
Preference number: 1 (lower is better)
Translates to: GANPLELRPEMRRGN*GARRRGGGGGWEPG
Trigger: ACCCGGTTCCCACCCTCCTCCACCTCCTCTCCTCCGGGCCCCTCAGTTTCCTCTCCTCATCTCTGGCCTCAGTTCCAGAGGGTTAGCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR GCA 90 bp GCAGGGACTCCTTCCAGATGGGGCTGGCCTGGCAGCTACAGCGATTaGCTCCTCCCCCAGAACATCCAGCCGGAGGGCCCAATCACACCT +
Preference number: 1 (lower is better)
Translates to: AGTPSRWGWPGSYSD*LLPQNIQPEGPITP
Trigger: AGGTGTGATTGGGCCCTCCGGCTGGATGTTCTGGGGGAGGAGGCAATCGCTGTAGCTGCCAGGCCAGCCCCATCTGGAAGGAGTCCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR CCA 90 bp GAGAGGATGTGGGTCTCGGTCCTGCAACCCCAAATGCCTCCCAGGTaGACGCGGGTCTGGGTGGATTGGCTCCCCAGCTCCCACTTCCCT +
Preference number: 1 (lower is better)
Translates to: ERMWVSVLQPQMPPR*TRVWVDWLPSSHFP
Trigger: AGGGAAGTGGGAGCTGGGGAGCCAATCCACCCAGACCCGCGTCCACCTGGGAGGCATTTGGGGTTGCAGGACCGAGACCCACATCCTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR TCA 90 bp GGCCGGGTGGCACTGAGGACAAGAAATCCCCAGGACATCAGGGCCTaGCCACCCACCTCTCTGCGCTCTCATGTGGTCTCATTCCGGCCC +
Preference number: 1 (lower is better)
Translates to: GRVALRTRNPQDIRA*PPTSLRSHVVSFRP
Trigger: GGGCCGGAATGAGACCACATGAGAGCGCAGAGAGGTGGGTGGTCAGGCCCTGATGTCCTGGGGATTTCTTGTCCTCAGTGCCACCCGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR CCA 90 bp TTAGGGCTGAGGCAGAGCAGGGACTCCTTCCAGATGGGGCTGGCCTaGCAGCTACAGCGATTGCCTCCTCCCCCAGAACATCCAGCCGGA +
Preference number: 1 (lower is better)
Translates to: LGLRQSRDSFQMGLA*QLQRLPPPPEHPAG
Trigger: TCCGGCTGGATGTTCTGGGGGAGGAGGCAATCGCTGTAGCTGCCAGGCCAGCCCCATCTGGAAGGAGTCCCTGCTCTGCCTCAGCCCTAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR CCA 90 bp GGGGTTGGAGGGCTGACGCACACCCTGCCTGAGATCCCAGCCGCCTaGAAGCTGATAAGGAGCCCTGGCCTCATTACATGGGACCAGCTG +
Preference number: 1 (lower is better)
Translates to: GVGGLTHTLPEIPAA*KLIRSPGLITWDQL
Trigger: CAGCTGGTCCCATGTAATGAGGCCAGGGCTCCTTATCAGCTTCCAGGCGGCTGGGATCTCAGGCAGGGTGTGCGTCAGCCCTCCAACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR GCA 90 bp ATCCACACAGTAACTTTCCACTGGCCTGGAGTTGGCCACTGCACATaGTGGCTGCACGCTCCCCCAGTGTGGCCTCCTGGTTCCCTCCCC +
Preference number: 1 (lower is better)
Translates to: IHTVTFHWPGVGHCT*WLHAPPVWPPGSLP
Trigger: GGGGAGGGAACCAGGAGGCCACACTGGGGGAGCGTGCAGCCAGCATGTGCAGTGGCCAACTCCAGGCCAGTGGAAAGTTACTGTGTGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR CCA 90 bp CTGTGTCTGCCCTCAGGGACTCAGGAGAACGGCTCAGGGAGGGCTTaGGAGGGGGTACACTGTGTCCGAGAGATGCAACCATCGTTCGGC +
Preference number: 1 (lower is better)
Translates to: LCLPSGTQENGSGRA*EGVHCVREMQPSFG
Trigger: GCCGAACGATGGTTGCATCTCTCGGACACAGTGTACCCCCTCCCAAGCCCTCCCTGAGCCGTTCTCCTGAGTCCCTGAGGGCAGACACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR CCA 90 bp GCCTTCAGCCTTGACCGTCCCAGTTTGGAAGATGTAACGGGCGAATaGGGCGGCACAGGGATTGACGTGGCCTCAGTTCCTCAGGGTCCC +
Preference number: 1 (lower is better)
Translates to: AFSLDRPSLEDVTGE*GGTGIDVASVPQGP
Trigger: GGGACCCTGAGGAACTGAGGCCACGTCAATCCCTGTGCCGCCCCATTCGCCCGTTACATCTTCCAAACTGGGACGGTCAAGGCTGAAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR TCA 90 bp CCTCCTTGTCCCTTGGACCCTCAAACCCAGAGGAGCCTTCAGCCTTaGCCGTCCCAGTTTGGAAGATGTAACGGGCGAATGGGGCGGCAC +
Preference number: 1 (lower is better)
Translates to: PPCPLDPQTQRSLQP*PSQFGRCNGRMGRH
Trigger: GTGCCGCCCCATTCGCCCGTTACATCTTCCAAACTGGGACGGTCAAGGCTGAAGGCTCCTCTGGGTTTGAGGGTCCAAGGGACAAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR TCA 90 bp GGGGCTCAGGGCTCTGCCGGGCTTCCTGGGTCTCTCTCCTGCATCTaGAATCCTGCTAGGCTTCTCCTCCTTGTCCCTTGGACCCTCAAA +
Preference number: 1 (lower is better)
Translates to: GAQGSAGLPGSLSCI*NPARLLLLVPWTLK
Trigger: TTTGAGGGTCCAAGGGACAAGGAGGAGAAGCCTAGCAGGATTTCAGATGCAGGAGAGAGACCCAGGAAGCCCGGCAGAGCCCTGAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR GCA 90 bp TCCTGTATCCACACAGTAACTTTCCACTGGCCTGGAGTTGGCCACTaGACATGCTGGCTGCACGCTCCCCCAGTGTGGCCTCCTGGTTCC +
Preference number: 1 (lower is better)
Translates to: SCIHTVTFHWPGVGH*TCWLHAPPVWPPGS
Trigger: GGAACCAGGAGGCCACACTGGGGGAGCGTGCAGCCAGCATGTGCAGTGGCCAACTCCAGGCCAGTGGAAAGTTACTGTGTGGATACAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR CCA 90 bp AGAGCCTTCCTGTATCCACACAGTAACTTTCCACTGGCCTGGAGTTaGCCACTGCACATGCTGGCTGCACGCTCCCCCAGTGTGGCCTCC +
Preference number: 1 (lower is better)
Translates to: RAFLYPHSNFPLAWS*PLHMLAARSPSVAS
Trigger: GGAGGCCACACTGGGGGAGCGTGCAGCCAGCATGTGCAGTGGCCAACTCCAGGCCAGTGGAAAGTTACTGTGTGGATACAGGAAGGCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR CCA 90 bp CCACTCAGAGCCTTCCTGTATCCACACAGTAACTTTCCACTGGCCTaGAGTTGGCCACTGCACATGCTGGCTGCACGCTCCCCCAGTGTG +
Preference number: 1 (lower is better)
Translates to: PLRAFLYPHSNFPLA*SWPLHMLAARSPSV
Trigger: CACACTGGGGGAGCGTGCAGCCAGCATGTGCAGTGGCCAACTCCAGGCCAGTGGAAAGTTACTGTGTGGATACAGGAAGGCTCTGAGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR CCA 90 bp GCTAGCCACTCAGAGCCTTCCTGTATCCACACAGTAACTTTCCACTaGCCTGGAGTTGGCCACTGCACATGCTGGCTGCACGCTCCCCCA +
Preference number: 1 (lower is better)
Translates to: ASHSEPSCIHTVTFH*PGVGHCTCWLHAPP
Trigger: TGGGGGAGCGTGCAGCCAGCATGTGCAGTGGCCAACTCCAGGCCAGTGGAAAGTTACTGTGTGGATACAGGAAGGCTCTGAGTGGCTAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR TCA 90 bp TCCCAGTTTGGAAGATGTAACGGGCGAATGGGGCGGCACAGGGATTaGCGTGGCCTCAGTTCCTCAGGGTCCCCATGGCGTATGTACAAG +
Preference number: 1 (lower is better)
Translates to: SQFGRCNGRMGRHRD*RGLSSSGSPWRMYK
Trigger: CTTGTACATACGCCATGGGGACCCTGAGGAACTGAGGCCACGTCAATCCCTGTGCCGCCCCATTCGCCCGTTACATCTTCCAAACTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR CCA 90 bp AGGGACTCTGGGCTGAGTGAGTGGCCAGTGAAGCTAGAAGAGATGTaGACTGTGCCAACTATGAAGACCTCAGGAGGCCTGGCTGGGGAC +
Preference number: 1 (lower is better)
Translates to: RDSGLSEWPVKLEEM*TVPTMKTSGGLAGD
Trigger: GTCCCCAGCCAGGCCTCCTGAGGTCTTCATAGTTGGCACAGTCCACATCTCTTCTAGCTTCACTGGCCACTCACTCAGCCCAGAGTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR CCA 90 bp GGAGCCCTGGCCTCATTACATGGGACCAGCTGGAGGGACTGGCCCTaGCTGTTAGCATCAGCTGGATGGCTTCCAAATTGGAGAGATGCA +
Preference number: 1 (lower is better)
Translates to: GALASLHGTSWRDWP*LLASAGWLPNWRDA
Trigger: TGCATCTCTCCAATTTGGAAGCCATCCAGCTGATGCTAACAGCCAGGGCCAGTCCCTCCAGCTGGTCCCATGTAATGAGGCCAGGGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR GCA 90 bp ACCAGCACACAGTGGGCATCTCACCCGTGCCCCCAATGCCTTTGCTaGACACACACCACCCGCCAGTTCTTGGCTCCTTTTCTCTTCAAA +
Preference number: 1 (lower is better)
Translates to: TSTQWASHPCPQCLC*THTTRQFLAPFLFK
Trigger: TTTGAAGAGAAAAGGAGCCAAGAACTGGCGGGTGGTGTGTGTGCAGCAAAGGCATTGGGGGCACGGGTGAGATGCCCACTGTGTGCTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR CCA 90 bp GGGACCAGCTGGAGGGACTGGCCCTGGCTGTTAGCATCAGCTGGATaGCTTCCAAATTGGAGAGATGCAGAGATAAGTGGGGGAGCACTT +
Preference number: 1 (lower is better)
Translates to: GTSWRDWPWLLASAG*LPNWRDAEISGGAL
Trigger: AAGTGCTCCCCCACTTATCTCTGCATCTCTCCAATTTGGAAGCCATCCAGCTGATGCTAACAGCCAGGGCCAGTCCCTCCAGCTGGTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR CCA 90 bp CTCCCAGCTCTTGTCTGGAAGATAGAAACCTCAGAGTGCAAAATCTaGCGAGGGGTTTCAGGAAAGACGGGAGGCCGGGTGGCACTGAGG +
Preference number: 1 (lower is better)
Translates to: LPALVWKIETSECKI*RGVSGKTGGRVALR
Trigger: CCTCAGTGCCACCCGGCCTCCCGTCTTTCCTGAAACCCCTCGCCAGATTTTGCACTCTGAGGTTTCTATCTTCCAGACAAGAGCTGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR CCA 90 bp TGCTACGGACATGAGCAGAGCGCTGTCTCTGGAGGATCACTGCGATaGATTAATTTAGACCAGCACACAGTGGGCATCTCACCCGTGCCC +
Preference number: 1 (lower is better)
Translates to: CYGHEQSAVSGGSLR*INLDQHTVGISPVP
Trigger: GGGCACGGGTGAGATGCCCACTGTGTGCTGGTCTAAATTAATCCATCGCAGTGATCCTCCAGAGACAGCGCTCTGCTCATGTCCGTAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR TCA 90 bp CCCGGCTTCCCCAGCTCTGCAAAGAAGCCATTTCTCAAATGGCTGTaGTGCGTGTGTGACACTGTTTATTGCCGAGGACCTGTCCCTCCT +
Preference number: 1 (lower is better)
Translates to: PGFPSSAKKPFLKWL*CVCDTVYCRGPVPP
Trigger: AGGAGGGACAGGTCCTCGGCAATAAACAGTGTCACACACGCATCACAGCCATTTGAGAAATGGCTTCTTTGCAGAGCTGGGGAAGCCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR GCA 90 bp AAATCTTGCCTCCCAGCTCTTGTCTGGAAGATAGAAACCTCAGAGTaGAAAATCTGGCGAGGGGTTTCAGGAAAGACGGGAGGCCGGGTG +
Preference number: 1 (lower is better)
Translates to: KSCLPALVWKIETSE*KIWRGVSGKTGGRV
Trigger: CACCCGGCCTCCCGTCTTTCCTGAAACCCCTCGCCAGATTTTGCACTCTGAGGTTTCTATCTTCCAGACAAGAGCTGGGAGGCAAGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR CCA 90 bp GCAGAGATAAGTGGGGGAGCACTTAGGGACTCTGGGCTGAGTGAGTaGCCAGTGAAGCTAGAAGAGATGTGGACTGTGCCAACTATGAAG +
Preference number: 1 (lower is better)
Translates to: AEISGGALRDSGLSE*PVKLEEMWTVPTMK
Trigger: CTTCATAGTTGGCACAGTCCACATCTCTTCTAGCTTCACTGGCCACTCACTCAGCCCAGAGTCCCTAAGTGCTCCCCCACTTATCTCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR TCA 90 bp CAGCTCTGCAAAGAAGCCATTTCTCAAATGGCTGTGATGCGTGTGTaGCACTGTTTATTGCCGAGGACCTGTCCCTCCTCCCCCAAGCTT +
Preference number: 1 (lower is better)
Translates to: QLCKEAISQMAVMRV*HCLLPRTCPSSPKL
Trigger: AAGCTTGGGGGAGGAGGGACAGGTCCTCGGCAATAAACAGTGTCACACACGCATCACAGCCATTTGAGAAATGGCTTCTTTGCAGAGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR GCA 90 bp AGGAGCCCGCTGGCAGTGAGGCTAGGAACCAGAAACCAGAAATCTTaGCTCCCAGCTCTTGTCTGGAAGATAGAAACCTCAGAGTGCAAA +
Preference number: 1 (lower is better)
Translates to: RSPLAVRLGTRNQKS*LPALVWKIETSECK
Trigger: TTTGCACTCTGAGGTTTCTATCTTCCAGACAAGAGCTGGGAGGCAAGATTTCTGGTTTCTGGTTCCTAGCCTCACTGCCAGCGGGCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR TCA 90 bp CCGCCCTATCCTGGCTATGAACTTCCATGTGGCAGATGGAAAAACTaGATTCCAGACAGCAAGAAACCCTCACCTAATAGCAGGAGCCCG +
Preference number: 1 (lower is better)
Translates to: PPYPGYELPCGRWKN*IPDSKKPSPNSRSP
Trigger: CGGGCTCCTGCTATTAGGTGAGGGTTTCTTGCTGTCTGGAATTCAGTTTTTCCATCTGCCACATGGAAGTTCATAGCCAGGATAGGGCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR CCA 90 bp AGGCTAGGAACCAGAAACCAGAAATCTTGCCTCCCAGCTCTTGTCTaGAAGATAGAAACCTCAGAGTGCAAAATCTGGCGAGGGGTTTCA +
Preference number: 1 (lower is better)
Translates to: RLGTRNQKSCLPALV*KIETSECKIWRGVS
Trigger: TGAAACCCCTCGCCAGATTTTGCACTCTGAGGTTTCTATCTTCCAGACAAGAGCTGGGAGGCAAGATTTCTGGTTTCTGGTTCCTAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR-3UTR TCA 90 bp CCCCAAATGCCTCCCAGGTGGACGCGGGTCTGGGTGGATTGGCTCCCCAGCTCCGGCTGGGGTAGACAGTaGCCTGGCCACAGGCTGGGT +
Preference number: 2 (lower is better)
Translates to: PQMPPRWTRVWVDWLPSSGWGRQ*PGHRLG
Trigger: ACCCAGCCTGTGGCCAGGTCACTGTCTACCCCAGCC...GGAGCTGGGGAGCCAATCCACCCAGACCCGCGTCCACCTGGGAGGCATTTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR-3UTR GCA 90 bp GCCAGTGGACAGCAGGAGTGTCGGGGGTGTGGCAGCTGGCCTGGGTCCCTGGAGTCCTGCAACCCCAAATaGCTCCCAGGTGGACGCGGG +
Preference number: 2 (lower is better)
Translates to: ASGQQECRGCGSWPGSLESCNPK*LPGGRG
Trigger: CCCGCGTCCACCTGGGAGGCATTTGGGGTTGCAGGA...CTCCAGGGACCCAGGCCAGCTGCCACACCCCCGACACTCCTGCTGTCCACTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR-3UTR CCA 90 bp GCCAGTGGACAGCAGGAGTGTCGGGGGTGTGGCAGCTGGCCTGGGTCCCTGGAGCTCTGCCGGGCTTCCTaGGTCTCTCTCCTGCATCTG +
Preference number: 2 (lower is better)
Translates to: ASGQQECRGCGSWPGSLELCRAS*VSLLHL
Trigger: CAGATGCAGGAGAGAGACCCAGGAAGCCCGGCAGAG...CTCCAGGGACCCAGGCCAGCTGCCACACCCCCGACACTCCTGCTGTCCACTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR-3UTR CCA 90 bp GCCAGTGGACAGCAGGAGTGTCGGGGGTGTGGCAGCTGGCCTGGGTCCCTGGAGTCCTCAGGGTCCCCATaGCGTATGTACAAGCGGCAG +
Preference number: 2 (lower is better)
Translates to: ASGQQECRGCGSWPGSLESSGSP*RMYKRQ
Trigger: CTGCCGCTTGTACATACGCCATGGGGACCCTGAGGA...CTCCAGGGACCCAGGCCAGCTGCCACACCCCCGACACTCCTGCTGTCCACTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR-3UTR CCA 90 bp GATGGGGCTGGGAAGGAACAGCACACCTCGTCTCCCTTCCCAAGGCAGACGGAGGGACGCGGGTCTGGGTaGATTGGCTCCCCAGCTCCC +
Preference number: 2 (lower is better)
Translates to: DGAGKEQHTSSPFPRQTEGRGSG*IGSPAP
Trigger: GGGAGCTGGGGAGCCAATCCACCCAGACCCGCGTCC...CTCCGTCTGCCTTGGGAAGGGAGACGAGGTGTGCTGTTCCTTCCCAGCCCCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR-3UTR TCA 90 bp GATGGGGCTGGGAAGGAACAGCACACCTCGTCTCCCTTCCCAAGGCAGACGGAGTGGGGGTTGGAGGGCTaGCGCACACCCTGCCTGAGA +
Preference number: 2 (lower is better)
Translates to: DGAGKEQHTSSPFPRQTEWGLEG*RTPCLR
Trigger: TCTCAGGCAGGGTGTGCGTCAGCCCTCCAACCCCCA...CTCCGTCTGCCTTGGGAAGGGAGACGAGGTGTGCTGTTCCTTCCCAGCCCCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR-3UTR GCA 90 bp CAGCACACCTCGTCTCCCTTCCCAAGGCAGACGGAGCTCCCAGCACAGGGGAGAACTGCACATGCTGGCTaGACGCTCCCCCAGTGTGGC +
Preference number: 2 (lower is better)
Translates to: QHTSSPFPRQTELPAQGRTAHAG*TLPQCG
Trigger: GCCACACTGGGGGAGCGTGCAGCCAGCATGTGCAGT...TCTCCCCTGTGCTGGGAGCTCCGTCTGCCTTGGGAAGGGAGACGAGGTGTGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR-3UTR CCA 90 bp ACCCACCTCTCTGCGCTCTCATGTGGTCTCATTCCGGCCCCCACCCAGGCCCAGCCTTCCAGATGGGGCTaGCCTGGCAGCTACAGCGAT +
Preference number: 2 (lower is better)
Translates to: THLSALSCGLIPAPTQAQPSRWG*PGSYSD
Trigger: ATCGCTGTAGCTGCCAGGCCAGCCCCATCTGGAAGG...CTGGGCCTGGGTGGGGGCCGGAATGAGACCACATGAGAGCGCAGAGAGGTGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR-3UTR CCA 90 bp GATGGGGCTGGGAAGGAACAGCACACCTCGTCTCCCTTCCCAAGGCAGACGGAGGGCCACTGCACATGCTaGCTGCACGCTCCCCCAGTG +
Preference number: 2 (lower is better)
Translates to: DGAGKEQHTSSPFPRQTEGHCTC*LHAPPV
Trigger: CACTGGGGGAGCGTGCAGCCAGCATGTGCAGTGGCC...CTCCGTCTGCCTTGGGAAGGGAGACGAGGTGTGCTGTTCCTTCCCAGCCCCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR-3UTR GCA 90 bp GCCAGTGGACAGCAGGAGTGTCGGGGGTGTGGCAGCTGGCCTGGGTCCCTGGAGAGGACACAGACTGGATaGAGGACAGTGTGCCCTAAG +
Preference number: 2 (lower is better)
Translates to: ASGQQECRGCGSWPGSLERTQTG*RTVCPK
Trigger: CTTAGGGCACACTGTCCTGCATCCAGTCTGTGTCCT...CTCCAGGGACCCAGGCCAGCTGCCACACCCCCGACACTCCTGCTGTCCACTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR-3UTR CCA 90 bp CATTCTCTGGAGGACGGTGGGGCAGGGAGGGCTCCTCATTCTCGGTTAGTGCCAGAGGGGCGCATTCTCTaGAGGACGGTGGGGCAGGGA +
Preference number: 2 (lower is better)
Translates to: HSLEDGGAGRAPHSRLVPEGRIL*RTVGQG
Trigger: TCCCTGCCCCACCGTCCTCCAGAGAATGCGCCCCTC...TGGCACTAACCGAGAATGAGGAGCCCTCCCTGCCCCACCGTCCTCCAGAGAATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550195.5
3UTR-3UTR CCA 90 bp GCCAGTGGACAGCAGGAGTGTCGGGGGTGTGGCAGCTGGCCTGGGTCCCTGGAGTGGAGAGAAATGTTCTaGTGCCTCTCCCGCCCTATC +
Preference number: 2 (lower is better)
Translates to: ASGQQECRGCGSWPGSLEWREMF*CLSRPI
Trigger: GATAGGGCGGGAGAGGCACCAGAACATTTCTCTCCA...CTCCAGGGACCCAGGCCAGCTGCCACACCCCCGACACTCCTGCTGTCCACTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR-3UTR GCA 90 bp CACAGTAACTTTCCACTGGCCTGGAGTTGGCCACTGCACATGCTGGCTGCACGCCTGGGACAGCCATCCTaGCCACCCACTCCACCTGCC +
Preference number: 2 (lower is better)
Translates to: HSNFPLAWSWPLHMLAARLGQPS*PPTPPA
Trigger: GGCAGGTGGAGTGGGTGGGCAGGATGGCTGTCCCAG...GCGTGCAGCCAGCATGTGCAGTGGCCAACTCCAGGCCAGTGGAAAGTTACTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR-3UTR CCA 90 bp GATGGGGCTGGGAAGGAACAGCACACCTCGTCTCCCTTCCCAAGGCAGACGGAGCAGATGGGGCTGGCCTaGCAGCTACAGCGATTGCCT +
Preference number: 2 (lower is better)
Translates to: DGAGKEQHTSSPFPRQTEQMGLA*QLQRLP
Trigger: AGGCAATCGCTGTAGCTGCCAGGCCAGCCCCATCTG...CTCCGTCTGCCTTGGGAAGGGAGACGAGGTGTGCTGTTCCTTCCCAGCCCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR-3UTR GCA 90 bp GAGGGGCGCATTCTCTGGAGGACGGTGGGGCAGGGAGGGCTCCTCATTCTCGGTTACACCCGCTCCCAGTaGTGCATAAACTGCATGGAG +
Preference number: 2 (lower is better)
Translates to: EGRILWRTVGQGGLLILGYTRSQ*CINCME
Trigger: CTCCATGCAGTTTATGCAGCACTGGGAGCGGGTGTA...ACCGAGAATGAGGAGCCCTCCCTGCCCCACCGTCCTCCAGAGAATGCGCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550195.5
3UTR-3UTR CCA 90 bp CAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGAACCAGGAGGGGCGCATTCTCTaGAGGACGGTGGGGCAGGGA +
Preference number: 2 (lower is better)
Translates to: QLVLYLVSQERRGGTGNQEGRIL*RTVGQG
Trigger: TCCCTGCCCCACCGTCCTCCAGAGAATGCGCCCCTC...CTGGTTCCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000320634.8
ENST00000550890.5
3UTR-3UTR CCA 90 bp CACAGTAACTTTCCACTGGCCTGGAGTTGGCCACTGCACATGCTGGCTGCACGCGGGACTCCTTCCAGATaGGGCTGGCCTGGCAGCTAC +
Preference number: 2 (lower is better)
Translates to: HSNFPLAWSWPLHMLAARGTPSR*GWPGSY
Trigger: GTAGCTGCCAGGCCAGCCCCATCTGGAAGGAGTCCC...GCGTGCAGCCAGCATGTGCAGTGGCCAACTCCAGGCCAGTGGAAAGTTACTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR-3UTR CCA 90 bp ACACCTCGTCTCCCTTCCCAAGGCAGACGGAGCTCCCAGCACAGGGGAGAGAGACCTGGCCTCATTACATaGGACCAGCTGGAGGGACTG +
Preference number: 2 (lower is better)
Translates to: TPRLPSQGRRSSQHRGERPGLIT*DQLEGL
Trigger: CAGTCCCTCCAGCTGGTCCCATGTAATGAGGCCAGG...TCTCTCTCCCCTGTGCTGGGAGCTCCGTCTGCCTTGGGAAGGGAGACGAGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR-3UTR CCA 90 bp CATTCTCTGGAGGACGGTGGGGCAGGGAGGGCTCCTCATTCTCGGTTAGTGCCATCAGGGCTCAGCGAGTaGCGTCGGTTACCCATCAGC +
Preference number: 2 (lower is better)
Translates to: HSLEDGGAGRAPHSRLVPSGLSE*RRLPIS
Trigger: GCTGATGGGTAACCGACGCCACTCGCTGAGCCCTGA...TGGCACTAACCGAGAATGAGGAGCCCTCCCTGCCCCACCGTCCTCCAGAGAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550195.5
3UTR-3UTR TCA 90 bp ACCCACCTCTCTGCGCTCTCATGTGGTCTCATTCCGGCCCCCACCCAGGCCCAGTCTCTCTCCTGCATCTaGAATCCTGCTAGGCTTCTC +
Preference number: 2 (lower is better)
Translates to: THLSALSCGLIPAPTQAQSLSCI*NPARLL
Trigger: GAGAAGCCTAGCAGGATTTCAGATGCAGGAGAGAGA...CTGGGCCTGGGTGGGGGCCGGAATGAGACCACATGAGAGCGCAGAGAGGTGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR-3UTR TCA 90 bp ACACCTCGTCTCCCTTCCCAAGGCAGACGGAGCTCCCAGCACAGGGGAGAGAGAAAAAGAGCTCTGTCATaGCCCGGGAGGGCCATTCAC +
Preference number: 2 (lower is better)
Translates to: TPRLPSQGRRSSQHRGERKRALS*PGRAIH
Trigger: GTGAATGGCCCTCCCGGGTCATGACAGAGCTCTTTT...TCTCTCTCCCCTGTGCTGGGAGCTCCGTCTGCCTTGGGAAGGGAGACGAGGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR-3UTR CCA 90 bp AGGGCCATTCACAGCAAGCAGCAGACAGCACAGGCTTCAGACCCTCTCCTATTGGAGGGGCGCATTCTCTaGAGGACGGTGGGGCAGGGA +
Preference number: 2 (lower is better)
Translates to: RAIHSKQQTAQASDPLLLEGRIL*RTVGQG
Trigger: TCCCTGCCCCACCGTCCTCCAGAGAATGCGCCCCTC...CAATAGGAGAGGGTCTGAAGCCTGTGCTGTCTGCTGCTTGCTGTGAATGGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR-3UTR CCA 90 bp CACAGTAACTTTCCACTGGCCTGGAGTTGGCCACTGCACATGCTGGCTGCACGCTTACATGGGACCAGCTaGAGGGACTGGCCCTGGCTG +
Preference number: 2 (lower is better)
Translates to: HSNFPLAWSWPLHMLAARLHGTS*RDWPWL
Trigger: CAGCCAGGGCCAGTCCCTCCAGCTGGTCCCATGTAA...GCGTGCAGCCAGCATGTGCAGTGGCCAACTCCAGGCCAGTGGAAAGTTACTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR-3UTR CCA 90 bp AGGGAACAGGTGCGGACACTGGGGAACTTGCAGGAGCTAAGGCCAGTGGACAGCGAGATCCCAGCCGCCTaGAAGCTGATAAGGAGCCCT +
Preference number: 2 (lower is better)
Translates to: REQVRTLGNLQELRPVDSEIPAA*KLIRSP
Trigger: AGGGCTCCTTATCAGCTTCCAGGCGGCTGGGATCTC...GCTGTCCACTGGCCTTAGCTCCTGCAAGTTCCCCAGTGTCCGCACCTGTTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR-3UTR CCA 90 bp GGGCTCAGCGAGTGGCGTCGGTTACCCATCAGCAACTGGGTGTCAAGTGCCAGGAGCCAGGGCACATATTaGAAGGGTAGGAGGATGGCC +
Preference number: 2 (lower is better)
Translates to: GLSEWRRLPISNWVSSARSQGTY*KGRRMA
Trigger: GGCCATCCTCCTACCCTTCCAATATGTGCCCTGGCT...CCTGGCACTTGACACCCAGTTGCTGATGGGTAACCGACGCCACTCGCTGAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550195.5
3UTR CAA 90 bp TGGACCCTCAAACCCAGAGGAGCCTTCAGCCTTGACCGTCCCAGTTaGGAAGATGTAACGGGCGAATGGGGCGGCACAGGGATTGACGTG +
Preference number: 2 (lower is better)
Translates to: WTLKPRGAFSLDRPS*EDVTGEWGGTGIDV
Trigger: CACGTCAATCCCTGTGCCGCCCCATTCGCCCGTTACATCTTCCAAACTGGGACGGTCAAGGCTGAAGGCTCCTCTGGGTTTGAGGGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR-3UTR TCA 90 bp AAGCTGATAAGGAGCCCTGGCCTCATTACATGGGACCAGCTGGAGGGACTGGCCTGCCCTAAGGCCACATaGTTGTGCAGCCCTAGGAGG +
Preference number: 2 (lower is better)
Translates to: KLIRSPGLITWDQLEGLACPKAT*LCSPRR
Trigger: CCTCCTAGGGCTGCACAATCATGTGGCCTTAGGGCA...GGCCAGTCCCTCCAGCTGGTCCCATGTAATGAGGCCAGGGCTCCTTATCAGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR-3UTR TCA 90 bp AGACTCCCTTCCTCCTTTACAGCTTGTGACACCTGCTCAGCTGCGGTTTCCTTAAGGCAGCTGTGGGTCTaGACCCCAGGCCCGCCACTC +
Preference number: 2 (lower is better)
Translates to: RLPSSFTACDTCSAAVSLRQLWV*TPGPPL
Trigger: GAGTGGCGGGCCTGGGGTTCAGACCCACAGCTGCCT...TAAGGAAACCGCAGCTGAGCAGGTGTCACAAGCTGTAAAGGAGGAAGGGAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR-3UTR CCA 90 bp GCCAGTGGACAGCAGGAGTGTCGGGGGTGTGGCAGCTGGCCTGGGTCCCTGGAGGGATGGCTTCCAAATTaGAGAGATGCAGAGATAAGT +
Preference number: 2 (lower is better)
Translates to: ASGQQECRGCGSWPGSLEGWLPN*RDAEIS
Trigger: ACTTATCTCTGCATCTCTCCAATTTGGAAGCCATCC...CTCCAGGGACCCAGGCCAGCTGCCACACCCCCGACACTCCTGCTGTCCACTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR-3UTR CCA 90 bp AGACTCCCTTCCTCCTTTACAGCTTGTGACACCTGCTCAGCTGCGGTTTCCTTACACGCTCCCCCAGTGTaGCCTCCTGGTTCCCTCCCC +
Preference number: 2 (lower is better)
Translates to: RLPSSFTACDTCSAAVSLHAPPV*PPGSLP
Trigger: GGGGAGGGAACCAGGAGGCCACACTGGGGGAGCGTG...TAAGGAAACCGCAGCTGAGCAGGTGTCACAAGCTGTAAAGGAGGAAGGGAGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR-3UTR CCA 90 bp GGGGCGCATTCTCTGGAGGACGGTGGGGCAGGGAGGGCTCCTCATTCTCGGTTATTACCCATCAGCAACTaGGTGTCAAGTGCCAGGAAC +
Preference number: 2 (lower is better)
Translates to: GAHSLEDGGAGRAPHSRLLPISN*VSSARN
Trigger: GTTCCTGGCACTTGACACCCAGTTGCTGATGGGTAA...TAACCGAGAATGAGGAGCCCTCCCTGCCCCACCGTCCTCCAGAGAATGCGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550195.5
3UTR CAA 90 bp CTGGGTCTCTCTCCTGCATCTGAAATCCTGCTAGGCTTCTCCTCCTaGTCCCTTGGACCCTCAAACCCAGAGGAGCCTTCAGCCTTGACC +
Preference number: 2 (lower is better)
Translates to: LGLSPASEILLGFSS*SLGPSNPEEPSALT
Trigger: GGTCAAGGCTGAAGGCTCCTCTGGGTTTGAGGGTCCAAGGGACAAGGAGGAGAAGCCTAGCAGGATTTCAGATGCAGGAGAGAGACCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR-3UTR CCA 90 bp CCCAGTTTGGAAGATGTAACGGGCGAATGGGGCGGCACAGGGATTGACGTGGCCGGCCACAGGCTGGGTTaGCAGCTAGTTTTATATCTG +
Preference number: 2 (lower is better)
Translates to: PSLEDVTGEWGGTGIDVAGHRLG*QLVLYL
Trigger: CAGATATAAAACTAGCTGCCAACCCAGCCTGTGGCC...GGCCACGTCAATCCCTGTGCCGCCCCATTCGCCCGTTACATCTTCCAAACTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR-3UTR CCA 90 bp AGACCCTCTCCTATTGCCCTTGGCCTCCAGGTCCAAATCCCTAGAACAAGCCGCCTCCTCCTTGTCCCTTaGACCCTCAAACCCAGAGGA +
Preference number: 2 (lower is better)
Translates to: RPSPIALGLQVQIPRTSRLLLVP*TLKPRG
Trigger: TCCTCTGGGTTTGAGGGTCCAAGGGACAAGGAGGAG...GCGGCTTGTTCTAGGGATTTGGACCTGGAGGCCAAGGGCAATAGGAGAGGGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR-3UTR CCA 90 bp AGGGCCATTCACAGCAAGCAGCAGACAGCACAGGCTTCAGACCCTCTCCTATTGAGAAGATGGGCAGACTaGGACAGCCATCCTGCCCAC +
Preference number: 2 (lower is better)
Translates to: RAIHSKQQTAQASDPLLLRRWAD*DSHPAH
Trigger: GTGGGCAGGATGGCTGTCCCAGTCTGCCCATCTTCT...CAATAGGAGAGGGTCTGAAGCCTGTGCTGTCTGCTGCTTGCTGTGAATGGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR-3UTR CCA 90 bp AAGCTGATAAGGAGCCCTGGCCTCATTACATGGGACCAGCTGGAGGGACTGGCCTCTGGGCTGAGTGAGTaGCCAGTGAAGCTAGAAGAG +
Preference number: 2 (lower is better)
Translates to: KLIRSPGLITWDQLEGLASGLSE*PVKLEE
Trigger: CTCTTCTAGCTTCACTGGCCACTCACTCAGCCCAGA...GGCCAGTCCCTCCAGCTGGTCCCATGTAATGAGGCCAGGGCTCCTTATCAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR-3UTR CCA 90 bp ACCCACCTCTCTGCGCTCTCATGTGGTCTCATTCCGGCCCCCACCCAGGCCCAGTTAGCATCAGCTGGATaGCTTCCAAATTGGAGAGAT +
Preference number: 2 (lower is better)
Translates to: THLSALSCGLIPAPTQAQLASAG*LPNWRD
Trigger: ATCTCTCCAATTTGGAAGCCATCCAGCTGATGCTAA...CTGGGCCTGGGTGGGGGCCGGAATGAGACCACATGAGAGCGCAGAGAGGTGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR CAA 90 bp ATTCACAGCAAGCAGCAGACAGCACAGGCTTCAGACCCTCTCCTATaGCCCTTGGCCTCCAGGTCCAAATCCCTAGAACAAGCCGCTGGT +
Preference number: 2 (lower is better)
Translates to: IHSKQQTAQASDPLL*PLASRSKSLEQAAG
Trigger: ACCAGCGGCTTGTTCTAGGGATTTGGACCTGGAGGCCAAGGGCAATAGGAGAGGGTCTGAAGCCTGTGCTGTCTGCTGCTTGCTGTGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR CAA 90 bp CTTCTGACGCCTCTCCTGGTGTTTCAGGATTCCTCACTGCCTGGATaGGAGATGGAACGCATAGACTTTGGCCCTGACCCTGCTGCCTAC +
Preference number: 2 (lower is better)
Translates to: LLTPLLVFQDSSLPG*EMERIDFGPDPAAY
Trigger: GTAGGCAGCAGGGTCAGGGCCAAAGTCTATGCGTTCCATCTCCAATCCAGGCAGTGAGGAATCCTGAAACACCAGGAGAGGCGTCAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR-3UTR GCA 90 bp CTTCCAGAAGAGGACTTCAGTGGGAGACCCCTCAACTCACATTCCGGACAGTCACCTGCCCTCACCTCCTaGCCCAAAAGAGCTCTGTCA +
Preference number: 2 (lower is better)
Translates to: LPEEDFSGRPLNSHSGQSPALTS*PKRALS
Trigger: TGACAGAGCTCTTTTGGGGCAGGAGGTGAGGGCAGG...TGACTGTCCGGAATGTGAGTTGAGGGGTCTCCCACTGAAGTCCTCTTCTGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR-3UTR GCA 90 bp AAAATATACTCCTCAGGGCTCAGCGAGTGGCGTCGGTTACCCATCAGCAACTGGACCCGCTCCCAGTGCTaGATAAACTGCATGGAGCCA +
Preference number: 2 (lower is better)
Translates to: KIYSSGLSEWRRLPISNWTRSQC*INCMEP
Trigger: TGGCTCCATGCAGTTTATGCAGCACTGGGAGCGGGT...CCAGTTGCTGATGGGTAACCGACGCCACTCGCTGAGCCCTGAGGAGTATATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550195.5
3UTR CAA 90 bp CAGGAGCCCGCTGGCAGTGAGGCTAGGAACCAGAAACCAGAAATCTaGCCTCCCAGCTCTTGTCTGGAAGATAGAAACCTCAGAGTGCAA +
Preference number: 2 (lower is better)
Translates to: QEPAGSEARNQKPEI*PPSSCLEDRNLRVQ
Trigger: TTGCACTCTGAGGTTTCTATCTTCCAGACAAGAGCTGGGAGGCAAGATTTCTGGTTTCTGGTTCCTAGCCTCACTGCCAGCGGGCTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR-3UTR CCA 90 bp CTTCCAGAAGAGGACTTCAGTGGGAGACCCCTCAACTCACATTCCGGACAGTCAGCTGATAAGGAGCCCTaGCCTCATTACATGGGACCA +
Preference number: 2 (lower is better)
Translates to: LPEEDFSGRPLNSHSGQSADKEP*PHYMGP
Trigger: TGGTCCCATGTAATGAGGCCAGGGCTCCTTATCAGC...TGACTGTCCGGAATGTGAGTTGAGGGGTCTCCCACTGAAGTCCTCTTCTGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR-3UTR CCA 90 bp CTTCCAGAAGAGGACTTCAGTGGGAGACCCCTCAACTCACATTCCGGACAGTCAAACTTTCCACTGGCCTaGAGTTGGCCACTGCACATG +
Preference number: 2 (lower is better)
Translates to: LPEEDFSGRPLNSHSGQSNFPLA*SWPLHM
Trigger: CATGTGCAGTGGCCAACTCCAGGCCAGTGGAAAGTT...TGACTGTCCGGAATGTGAGTTGAGGGGTCTCCCACTGAAGTCCTCTTCTGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR-3UTR GCA 90 bp TCTGGAGGACGGTGGGGCAGGGAGGGCTCCTCATTCTCGGTTAGTGCCAAAAAGCAACTGGGTGTCAAGTaGCAGGAACAATGTAAATAC +
Preference number: 2 (lower is better)
Translates to: SGGRWGREGSSFSVSAKKQLGVK*QEQCKY
Trigger: GTATTTACATTGTTCCTGGCACTTGACACCCAGTTG...CTTTTTGGCACTAACCGAGAATGAGGAGCCCTCCCTGCCCCACCGTCCTCCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550195.5
3UTR-3UTR GCA 90 bp AGACTCCCTTCCTCCTTTACAGCTTGTGACACCTGCTCAGCTGCGGTTTCCTTACGGCTTCCCCAGCTCTaGAAAGAAGCCATTTCTCAA +
Preference number: 2 (lower is better)
Translates to: RLPSSFTACDTCSAAVSLRLPQL*KEAISQ
Trigger: TTGAGAAATGGCTTCTTTGCAGAGCTGGGGAAGCCG...TAAGGAAACCGCAGCTGAGCAGGTGTCACAAGCTGTAAAGGAGGAAGGGAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR-3UTR GCA 90 bp CGGTTACCCATCAGCAACTGGGTGTCAAGTGCCAGGAACAATGTAAATACACCCCAGTGCTGCATAAACTaGATGGAGCCAGGGCACATA +
Preference number: 2 (lower is better)
Translates to: RLPISNWVSSARNNVNTPQCCIN*MEPGHI
Trigger: TATGTGCCCTGGCTCCATGCAGTTTATGCAGCACTG...GGGTGTATTTACATTGTTCCTGGCACTTGACACCCAGTTGCTGATGGGTAACCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550195.5
3UTR-3UTR GCA 90 bp AGACTCCCTTCCTCCTTTACAGCTTGTGACACCTGCTCAGCTGCGGTTTCCTTAATAGAAACCTCAGAGTaGAAAATCTGGCGAGGGGTT +
Preference number: 2 (lower is better)
Translates to: RLPSSFTACDTCSAAVSLIETSE*KIWRGV
Trigger: AACCCCTCGCCAGATTTTGCACTCTGAGGTTTCTAT...TAAGGAAACCGCAGCTGAGCAGGTGTCACAAGCTGTAAAGGAGGAAGGGAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR-3UTR CAA 90 bp GCCAGTGGACAGCAGGAGTGTCGGGGGTGTGGCAGCTGGCCTGGGTCCCTGGAGCAGGACACCTGGGACTaGGCTTCAGGTGGGCCAGGG +
Preference number: 3 (lower is better)
Translates to: ASGQQECRGCGSWPGSLEQDTWD*ASGGPG
Trigger: CCCTGGCCCACCTGAAGCCAAGTCCCAGGTGTCCTG...CTCCAGGGACCCAGGCCAGCTGCCACACCCCCGACACTCCTGCTGTCCACTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR CCA 72 bp TCAGGGCCTGACCACCCACCTCTCTGCGCTCTCATGTaGTCTCATTCCGGCCCCCACCCAGGCCCAGGGGCA +
Preference number: 3 (lower is better)
Translates to: SGPDHPPLCALM*SHSGPHPGPGA
Trigger: TGCCCCTGGGCCTGGGTGGGGGCCGGAATGAGACCACATGAGAGCGCAGAGAGGTGGGTGGTCAGGCCCTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR TCA 72 bp CCCTCTGGGGGTTGGAGGGCTGACGCACACCCTGCCTaGGATCCCAGCCGCCTGGAAGCTGATAAGGAGCCC +
Preference number: 3 (lower is better)
Translates to: PSGGWRADAHPA*DPSRLEADKEP
Trigger: GGGCTCCTTATCAGCTTCCAGGCGGCTGGGATCTCAGGCAGGGTGTGCGTCAGCCCTCCAACCCCCAGAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR TCA 72 bp CCCAGGCCCAGGGGCAAGCGTGATACCCTGTTTGCTTaGGGCAGCTGTGGGTCTGAACCCCAGGCCCGCCAC +
Preference number: 3 (lower is better)
Translates to: PRPRGKRDTLFA*GSCGSEPQARH
Trigger: GTGGCGGGCCTGGGGTTCAGACCCACAGCTGCCTCAAGCAAACAGGGTATCACGCTTGCCCCTGGGCCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR GCA 72 bp CCTTCCAGATGGGGCTGGCCTGGCAGCTACAGCGATTaGCTCCTCCCCCAGAACATCCAGCCGGAGGGCCCA +
Preference number: 3 (lower is better)
Translates to: PSRWGWPGSYSD*LLPQNIQPEGP
Trigger: TGGGCCCTCCGGCTGGATGTTCTGGGGGAGGAGGCAATCGCTGTAGCTGCCAGGCCAGCCCCATCTGGAAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR GCA 72 bp TCCACTGGCCTGGAGTTGGCCACTGCACATGCTGGCTaGACGCTCCCCCAGTGTGGCCTCCTGGTTCCCTCC +
Preference number: 3 (lower is better)
Translates to: STGLELATAHAG*TLPQCGLLVPS
Trigger: GGAGGGAACCAGGAGGCCACACTGGGGGAGCGTGCAGCCAGCATGTGCAGTGGCCAACTCCAGGCCAGTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR CCA 72 bp CTGCAACCCCAAATGCCTCCCAGGTGGACGCGGGTCTaGGTGGATTGGCTCCCCAGCTCCCACTTCCCTGGG +
Preference number: 3 (lower is better)
Translates to: LQPQMPPRWTRV*VDWLPSSHFPG
Trigger: CCCAGGGAAGTGGGAGCTGGGGAGCCAATCCACCCAGACCCGCGTCCACCTGGGAGGCATTTGGGGTTGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR-3UTR CAA 90 bp GCCAGTGGACAGCAGGAGTGTCGGGGGTGTGGCAGCTGGCCTGGGTCCCTGGAGCCTCTCCTATTGCCCTaGGCCTCCAGGTCCAAATCC +
Preference number: 3 (lower is better)
Translates to: ASGQQECRGCGSWPGSLEPLLLP*ASRSKS
Trigger: GGATTTGGACCTGGAGGCCAAGGGCAATAGGAGAGG...CTCCAGGGACCCAGGCCAGCTGCCACACCCCCGACACTCCTGCTGTCCACTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR TCA 72 bp CCTCTGGAACTGAGGCCAGAGATGAGGAGAGGAAACTaGGGGGCCCGGAGGAGAGGAGGTGGAGGAGGGTGG +
Preference number: 3 (lower is better)
Translates to: PLELRPEMRRGN*GARRRGGGGGW
Trigger: CCACCCTCCTCCACCTCCTCTCCTCCGGGCCCCTCAGTTTCCTCTCCTCATCTCTGGCCTCAGTTCCAGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR GCA 72 bp GTGAGAGGATGTGGGTCTCGGTCCTGCAACCCCAAATaGCTCCCAGGTGGACGCGGGTCTGGGTGGATTGGC +
Preference number: 3 (lower is better)
Translates to: VRGCGSRSCNPK*LPGGRGSGWIG
Trigger: GCCAATCCACCCAGACCCGCGTCCACCTGGGAGGCATTTGGGGTTGCAGGACCGAGACCCACATCCTCTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR-3UTR CAA 90 bp TGCAGCCCTAGGAGGAATTGCAGTGGGGCTCAGGGCTCTGCCGGGCTTCCTGGGGAGGAGCCTTCAGCCTaGACCGTCCCAGTTTGGAAG +
Preference number: 3 (lower is better)
Translates to: CSPRRNCSGAQGSAGLPGEEPSA*TVPVWK
Trigger: CTTCCAAACTGGGACGGTCAAGGCTGAAGGCTCCTC...CCCAGGAAGCCCGGCAGAGCCCTGAGCCCCACTGCAATTCCTCCTAGGGCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR-3UTR CAA 90 bp CAGCACACCTCGTCTCCCTTCCCAAGGCAGACGGAGCTCCCAGCACAGGGGAGATGGCAGCTACAGCGATaGCCTCCTCCCCCAGAACAT +
Preference number: 3 (lower is better)
Translates to: QHTSSPFPRQTELPAQGRWQLQR*PPPPEH
Trigger: ATGTTCTGGGGGAGGAGGCAATCGCTGTAGCTGCCA...TCTCCCCTGTGCTGGGAGCTCCGTCTGCCTTGGGAAGGGAGACGAGGTGTGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR TCA 72 bp GGAAGATGTAACGGGCGAATGGGGCGGCACAGGGATTaGCGTGGCCTCAGTTCCTCAGGGTCCCCATGGCGT +
Preference number: 3 (lower is better)
Translates to: GRCNGRMGRHRD*RGLSSSGSPWR
Trigger: ACGCCATGGGGACCCTGAGGAACTGAGGCCACGTCAATCCCTGTGCCGCCCCATTCGCCCGTTACATCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR CCA 72 bp AGCTGCCTGGCGGGTGGAGAAGTGAGTGAGAGGATGTaGGTCTCGGTCCTGCAACCCCAAATGCCTCCCAGG +
Preference number: 3 (lower is better)
Translates to: SCLAGGEVSERM*VSVLQPQMPPR
Trigger: CCTGGGAGGCATTTGGGGTTGCAGGACCGAGACCCACATCCTCTCACTCACTTCTCCACCCGCCAGGCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR CCA 72 bp AGGCAGAGCAGGGACTCCTTCCAGATGGGGCTGGCCTaGCAGCTACAGCGATTGCCTCCTCCCCCAGAACAT +
Preference number: 3 (lower is better)
Translates to: RQSRDSFQMGLA*QLQRLPPPPEH
Trigger: ATGTTCTGGGGGAGGAGGCAATCGCTGTAGCTGCCAGGCCAGCCCCATCTGGAAGGAGTCCCTGCTCTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR CCA 72 bp GGGCTGACGCACACCCTGCCTGAGATCCCAGCCGCCTaGAAGCTGATAAGGAGCCCTGGCCTCATTACATGG +
Preference number: 3 (lower is better)
Translates to: GLTHTLPEIPAA*KLIRSPGLITW
Trigger: CCATGTAATGAGGCCAGGGCTCCTTATCAGCTTCCAGGCGGCTGGGATCTCAGGCAGGGTGTGCGTCAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR-3UTR CAA 90 bp TGCAGCCCTAGGAGGAATTGCAGTGGGGCTCAGGGCTCTGCCGGGCTTCCTGGGCTTGACCGTCCCAGTTaGGAAGATGTAACGGGCGAA +
Preference number: 3 (lower is better)
Translates to: CSPRRNCSGAQGSAGLPGLDRPS*EDVTGE
Trigger: TTCGCCCGTTACATCTTCCAAACTGGGACGGTCAAG...CCCAGGAAGCCCGGCAGAGCCCTGAGCCCCACTGCAATTCCTCCTAGGGCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR TCA 72 bp CCTGCCCTCACCTCCTGCCCCAAAAGAGCTCTGTCATaGCCCGGGAGGGCCATTCACAGCAAGCAGCAGACA +
Preference number: 3 (lower is better)
Translates to: PALTSCPKRALS*PGRAIHSKQQT
Trigger: TGTCTGCTGCTTGCTGTGAATGGCCCTCCCGGGTCATGACAGAGCTCTTTTGGGGCAGGAGGTGAGGGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR TCA 72 bp GAGGGGTTTCAGGAAAGACGGGAGGCCGGGTGGCACTaGGGACAAGAAATCCCCAGGACATCAGGGCCTGAC +
Preference number: 3 (lower is better)
Translates to: EGFQERREAGWH*GQEIPRTSGPD
Trigger: GTCAGGCCCTGATGTCCTGGGGATTTCTTGTCCTCAGTGCCACCCGGCCTCCCGTCTTTCCTGAAACCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR GCA 72 bp CACACAGTAACTTTCCACTGGCCTGGAGTTGGCCACTaGACATGCTGGCTGCACGCTCCCCCAGTGTGGCCT +
Preference number: 3 (lower is better)
Translates to: HTVTFHWPGVGH*TCWLHAPPVWP
Trigger: AGGCCACACTGGGGGAGCGTGCAGCCAGCATGTGCAGTGGCCAACTCCAGGCCAGTGGAAAGTTACTGTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR-3UTR CAA 90 bp TGCAGCCCTAGGAGGAATTGCAGTGGGGCTCAGGGCTCTGCCGGGCTTCCTGGGTGGCCACAGGCTGGGTaGGCAGCTAGTTTTATATCT +
Preference number: 3 (lower is better)
Translates to: CSPRRNCSGAQGSAGLPGWPQAG*AASFIS
Trigger: AGATATAAAACTAGCTGCCAACCCAGCCTGTGGCCA...CCCAGGAAGCCCGGCAGAGCCCTGAGCCCCACTGCAATTCCTCCTAGGGCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR-3UTR CAA 90 bp CACAGTAACTTTCCACTGGCCTGGAGTTGGCCACTGCACATGCTGGCTGCACGCTCAGACCCTCTCCTATaGCCCTTGGCCTCCAGGTCC +
Preference number: 3 (lower is better)
Translates to: HSNFPLAWSWPLHMLAARSDPLL*PLASRS
Trigger: GGACCTGGAGGCCAAGGGCAATAGGAGAGGGTCTGA...GCGTGCAGCCAGCATGTGCAGTGGCCAACTCCAGGCCAGTGGAAAGTTACTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR TCA 72 bp GGCTCTGCCGGGCTTCCTGGGTCTCTCTCCTGCATCTaGAATCCTGCTAGGCTTCTCCTCCTTGTCCCTTGG +
Preference number: 3 (lower is better)
Translates to: GSAGLPGSLSCI*NPARLLLLVPW
Trigger: CCAAGGGACAAGGAGGAGAAGCCTAGCAGGATTTCAGATGCAGGAGAGAGACCCAGGAAGCCCGGCAGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR TCA 72 bp GCCTGGATTGGAGATGGAACGCATAGACTTTGGCCCTaGCCCTGCTGCCTACACTGTGGTACCTGCCACCCC +
Preference number: 3 (lower is better)
Translates to: AWIGDGTHRLWP*PCCLHCGTCHP
Trigger: GGGGTGGCAGGTACCACAGTGTAGGCAGCAGGGTCAGGGCCAAAGTCTATGCGTTCCATCTCCAATCCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR-3UTR CAA 90 bp CTTCCAGAAGAGGACTTCAGTGGGAGACCCCTCAACTCACATTCCGGACAGTCATCCACTGGCCTGGAGTaGGCCACTGCACATGCTGGC +
Preference number: 3 (lower is better)
Translates to: LPEEDFSGRPLNSHSGQSSTGLE*ATAHAG
Trigger: GCCAGCATGTGCAGTGGCCAACTCCAGGCCAGTGGA...TGACTGTCCGGAATGTGAGTTGAGGGGTCTCCCACTGAAGTCCTCTTCTGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR CCA 72 bp CTTGACCGTCCCAGTTTGGAAGATGTAACGGGCGAATaGGGCGGCACAGGGATTGACGTGGCCTCAGTTCCT +
Preference number: 3 (lower is better)
Translates to: LDRPSLEDVTGE*GGTGIDVASVP
Trigger: AGGAACTGAGGCCACGTCAATCCCTGTGCCGCCCCATTCGCCCGTTACATCTTCCAAACTGGGACGGTCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR CCA 72 bp CTGTATCCACACAGTAACTTTCCACTGGCCTGGAGTTaGCCACTGCACATGCTGGCTGCACGCTCCCCCAGT +
Preference number: 3 (lower is better)
Translates to: LYPHSNFPLAWS*PLHMLAARSPS
Trigger: ACTGGGGGAGCGTGCAGCCAGCATGTGCAGTGGCCAACTCCAGGCCAGTGGAAAGTTACTGTGTGGATACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR CCA 72 bp GCCTTCCTGTATCCACACAGTAACTTTCCACTGGCCTaGAGTTGGCCACTGCACATGCTGGCTGCACGCTCC +
Preference number: 3 (lower is better)
Translates to: AFLYPHSNFPLA*SWPLHMLAARS
Trigger: GGAGCGTGCAGCCAGCATGTGCAGTGGCCAACTCCAGGCCAGTGGAAAGTTACTGTGTGGATACAGGAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR TCA 72 bp CAGACTGGATGCAGGACAGTGTGCCCTAAGGCCACATaGTTGTGCAGCCCTAGGAGGAATTGCAGTGGGGCT +
Preference number: 3 (lower is better)
Translates to: QTGCRTVCPKAT*LCSPRRNCSGA
Trigger: AGCCCCACTGCAATTCCTCCTAGGGCTGCACAATCATGTGGCCTTAGGGCACACTGTCCTGCATCCAGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR GCA 72 bp TTACCGAGCCTTTCTGAGCACCTCGGCTTTTCCCTCTaGTACGGACATGAGCAGAGCGCTGTCTCTGGAGGA +
Preference number: 3 (lower is better)
Translates to: LPSLSEHLGFSL*YGHEQSAVSGG
Trigger: TCCTCCAGAGACAGCGCTCTGCTCATGTCCGTAGCAGAGGGAAAAGCCGAGGTGCTCAGAAAGGCTCGGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR GCA 72 bp GAGGCTGCGGCATCTTCTGCCCGGCTTCCCCAGCTCTaGAAAGAAGCCATTTCTCAAATGGCTGTGATGCGT +
Preference number: 3 (lower is better)
Translates to: EAAASSARLPQL*KEAISQMAVMR
Trigger: ACGCATCACAGCCATTTGAGAAATGGCTTCTTTGCAGAGCTGGGGAAGCCGGGCAGAAGATGCCGCAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR CCA 72 bp GCCTCATTACATGGGACCAGCTGGAGGGACTGGCCCTaGCTGTTAGCATCAGCTGGATGGCTTCCAAATTGG +
Preference number: 3 (lower is better)
Translates to: ASLHGTSWRDWP*LLASAGWLPNW
Trigger: CCAATTTGGAAGCCATCCAGCTGATGCTAACAGCCAGGGCCAGTCCCTCCAGCTGGTCCCATGTAATGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR CCA 72 bp GGGCTGAGTGAGTGGCCAGTGAAGCTAGAAGAGATGTaGACTGTGCCAACTATGAAGACCTCAGGAGGCCTG +
Preference number: 3 (lower is better)
Translates to: GLSEWPVKLEEM*TVPTMKTSGGL
Trigger: CAGGCCTCCTGAGGTCTTCATAGTTGGCACAGTCCACATCTCTTCTAGCTTCACTGGCCACTCACTCAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR CCA 72 bp AGACCCCTCAACTCACATTCCGGACAGTCAGATTCCTaGCTGCCTCCAGCTTTACAAAATCCAGCCCACCCC +
Preference number: 3 (lower is better)
Translates to: RPLNSHSGQSDS*LPPALQNPAHP
Trigger: GGGGTGGGCTGGATTTTGTAAAGCTGGAGGCAGCCAGGAATCTGACTGTCCGGAATGTGAGTTGAGGGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR CCA 72 bp GGGCTCAGCGAGTGGCGTCGGTTACCCATCAGCAACTaGGTGTCAAGTGCCAGGAACAATGTAAATACACCC +
Preference number: 3 (lower is better)
Translates to: GLSEWRRLPISN*VSSARNNVNTP
Trigger: GGGTGTATTTACATTGTTCCTGGCACTTGACACCCAGTTGCTGATGGGTAACCGACGCCACTCGCTGAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550195.5
3UTR-3UTR CAA 90 bp CTTCCAGAAGAGGACTTCAGTGGGAGACCCCTCAACTCACATTCCGGACAGTCACTAGGCTTCTCCTCCTaGTCCCTTGGACCCTCAAAC +
Preference number: 3 (lower is better)
Translates to: LPEEDFSGRPLNSHSGQSLGFSS*SLGPSN
Trigger: GTTTGAGGGTCCAAGGGACAAGGAGGAGAAGCCTAG...TGACTGTCCGGAATGTGAGTTGAGGGGTCTCCCACTGAAGTCCTCTTCTGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR-3UTR CAA 90 bp AGGGAACAGGTGCGGACACTGGGGAACTTGCAGGAGCTAAGGCCAGTGGACAGCTGGATGGCTTCCAAATaGGAGAGATGCAGAGATAAG +
Preference number: 3 (lower is better)
Translates to: REQVRTLGNLQELRPVDSWMASK*ERCRDK
Trigger: CTTATCTCTGCATCTCTCCAATTTGGAAGCCATCCA...GCTGTCCACTGGCCTTAGCTCCTGCAAGTTCCCCAGTGTCCGCACCTGTTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR CCA 72 bp CAGCTGGAGGGACTGGCCCTGGCTGTTAGCATCAGCTaGATGGCTTCCAAATTGGAGAGATGCAGAGATAAG +
Preference number: 3 (lower is better)
Translates to: QLEGLALAVSIS*MASKLERCRDK
Trigger: CTTATCTCTGCATCTCTCCAATTTGGAAGCCATCCAGCTGATGCTAACAGCCAGGGCCAGTCCCTCCAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR CCA 72 bp AGGGCTCCAAAAATATACTCCTCAGGGCTCAGCGAGTaGCGTCGGTTACCCATCAGCAACTGGGTGTCAAGT +
Preference number: 3 (lower is better)
Translates to: RAPKIYSSGLSE*RRLPISNWVSS
Trigger: ACTTGACACCCAGTTGCTGATGGGTAACCGACGCCACTCGCTGAGCCCTGAGGAGTATATTTTTGGAGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550195.5
3UTR CCA 72 bp CATGAGCAGAGCGCTGTCTCTGGAGGATCACTGCGATaGATTAATTTAGACCAGCACACAGTGGGCATCTCA +
Preference number: 3 (lower is better)
Translates to: HEQSAVSGGSLR*INLDQHTVGIS
Trigger: TGAGATGCCCACTGTGTGCTGGTCTAAATTAATCCATCGCAGTGATCCTCCAGAGACAGCGCTCTGCTCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR TCA 72 bp AAAGAAGCCATTTCTCAAATGGCTGTGATGCGTGTGTaGCACTGTTTATTGCCGAGGACCTGTCCCTCCTCC +
Preference number: 3 (lower is better)
Translates to: KEAISQMAVMRV*HCLLPRTCPSS
Trigger: GGAGGAGGGACAGGTCCTCGGCAATAAACAGTGTCACACACGCATCACAGCCATTTGAGAAATGGCTTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR GCA 72 bp TGCAGACTCCCTTCCTCCTTTACAGCTTGTGACACCTaGTCAGCTGCGGTTTCCTTAATCTTGCATTCCTGT +
Preference number: 3 (lower is better)
Translates to: CRLPSSFTACDT*SAAVSLILHSC
Trigger: ACAGGAATGCAAGATTAAGGAAACCGCAGCTGAGCAGGTGTCACAAGCTGTAAAGGAGGAAGGGAGTCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR GCA 72 bp TGCCAGGAACAATGTAAATACACCCGCTCCCAGTGCTaGATAAACTGCATGGAGCCAGGGCACATATTGGAA +
Preference number: 3 (lower is better)
Translates to: CQEQCKYTRSQC*INCMEPGHILE
Trigger: TTCCAATATGTGCCCTGGCTCCATGCAGTTTATGCAGCACTGGGAGCGGGTGTATTTACATTGTTCCTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550195.5
3UTR-3UTR CAA 90 bp AGACTCCCTTCCTCCTTTACAGCTTGTGACACCTGCTCAGCTGCGGTTTCCTTACTTCTGCAATGTTTCTaGAAAGCTGGGAGTAGGAAG +
Preference number: 3 (lower is better)
Translates to: RLPSSFTACDTCSAAVSLLLQCF*KAGSRK
Trigger: CTTCCTACTCCCAGCTTTCAAGAAACATTGCAGAAG...TAAGGAAACCGCAGCTGAGCAGGTGTCACAAGCTGTAAAGGAGGAAGGGAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR CCA 72 bp ACCAGAAACCAGAAATCTTGCCTCCCAGCTCTTGTCTaGAAGATAGAAACCTCAGAGTGCAAAATCTGGCGA +
Preference number: 3 (lower is better)
Translates to: TRNQKSCLPALV*KIETSECKIWR
Trigger: TCGCCAGATTTTGCACTCTGAGGTTTCTATCTTCCAGACAAGAGCTGGGAGGCAAGATTTCTGGTTTCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR TCA 72 bp CCTGGCTATGAACTTCCATGTGGCAGATGGAAAAACTaGATTCCAGACAGCAAGAAACCCTCACCTAATAGC +
Preference number: 3 (lower is better)
Translates to: PGYELPCGRWKN*IPDSKKPSPNS
Trigger: GCTATTAGGTGAGGGTTTCTTGCTGTCTGGAATTCAGTTTTTCCATCTGCCACATGGAAGTTCATAGCCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR GCA 90 bp GGGGCGGCACAGGGATTGACGTGGCCTCAGTTCCTCAGGGTCCCCATGGCGTATCCATGCACCTGCTGCTaGCCCTCGGTCCCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: GAAQGLTWPQFLRVPMAYPCTCC*PSVPGA
Trigger: GGCCCCTGGGACCGAGGGGCAGCAGCAGGTGCATGG...ATACGCCATGGGGACCCTGAGGAACTGAGGCCACGTCAATCCCTGTGCCGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp GCCAGTGGACAGCAGGAGTGTCGGGGGTGTGGCAGCTGGCCTGGGTCCCTGGAGAGACCTCAGGAGGCCTaGCTGGGGACGAGCCAGCAA +
Preference number: 4 (lower is better)
Translates to: ASGQQECRGCGSWPGSLERPQEA*LGTSQQ
Trigger: TTGCTGGCTCGTCCCCAGCCAGGCCTCCTGAGGTCT...CTCCAGGGACCCAGGCCAGCTGCCACACCCCCGACACTCCTGCTGTCCACTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp TCCTCAGGGTCCCCATGGCGTATGTACAAGCGGCAGAGGGCTGGGCTGGGCTGGCCCAGTGTGGCCTCCTaGTTCCCTCCCCACAGGCGC +
Preference number: 4 (lower is better)
Translates to: SSGSPWRMYKRQRAGLGWPSVAS*FPPHRR
Trigger: GCGCCTGTGGGGAGGGAACCAGGAGGCCACACTGGG...CCAGCCCAGCCCAGCCCTCTGCCGCTTGTACATACGCCATGGGGACCCTGAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR GCA 90 bp GGGGCGGCACAGGGATTGACGTGGCCTCAGTTCCTCAGGGTCCCCATGGCGTATTCGCCATGCACCTGCTaGTGCCCCTCGGTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: GAAQGLTWPQFLRVPMAYSPCTC*CPSVPG
Trigger: CCCTGGGACCGAGGGGCAGCAGCAGGTGCATGGCGA...ATACGCCATGGGGACCCTGAGGAACTGAGGCCACGTCAATCCCTGTGCCGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR GCA 90 bp GCCAGTGGACAGCAGGAGTGTCGGGGGTGTGGCAGCTGGCCTGGGTCCCTGGAGCCTGGAGTTGGCCACTaGACATGCTGGCTGCACGCT +
Preference number: 4 (lower is better)
Translates to: ASGQQECRGCGSWPGSLEPGVGH*TCWLHA
Trigger: AGCGTGCAGCCAGCATGTGCAGTGGCCAACTCCAGG...CTCCAGGGACCCAGGCCAGCTGCCACACCCCCGACACTCCTGCTGTCCACTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp TGCAGCCCTAGGAGGAATTGCAGTGGGGCTCAGGGCTCTGCCGGGCTTCCTGGGAGGTGGACGCGGGTCTaGGTGGATTGGCTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: CSPRRNCSGAQGSAGLPGRWTRV*VDWLPS
Trigger: GCTGGGGAGCCAATCCACCCAGACCCGCGTCCACCT...CCCAGGAAGCCCGGCAGAGCCCTGAGCCCCACTGCAATTCCTCCTAGGGCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp ACCCACCTCTCTGCGCTCTCATGTGGTCTCATTCCGGCCCCCACCCAGGCCCAGTCAGCCTTAGGCCTGTaGCAGCTGCCTGGCGGGTGG +
Preference number: 4 (lower is better)
Translates to: THLSALSCGLIPAPTQAQSALGL*QLPGGW
Trigger: CCACCCGCCAGGCAGCTGCCACAGGCCTAAGGCTGA...CTGGGCCTGGGTGGGGGCCGGAATGAGACCACATGAGAGCGCAGAGAGGTGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR TCA 90 bp GGGGCGGCACAGGGATTGACGTGGCCTCAGTTCCTCAGGGTCCCCATGGCGTATATAGGAGGGTGGGGCTaGGGGCACTGCTGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: GAAQGLTWPQFLRVPMAYIGGWG*GHCWSL
Trigger: GAGGCTCCAGCAGTGCCCTCAGCCCCACCCTCCTAT...ATACGCCATGGGGACCCTGAGGAACTGAGGCCACGTCAATCCCTGTGCCGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR TCA 90 bp GATGTGGGTCTCGGTCCTGCAACCCCAAATGCCTCCCAGGTGGACGCGGGTCTGGGCTGGGGTAGACAGTaGCCTGGCCACAGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: DVGLGPATPNASQVDAGLGWGRQ*PGHRLG
Trigger: ACCCAGCCTGTGGCCAGGTCACTGTCTACCCCAGCC...CAGACCCGCGTCCACCTGGGAGGCATTTGGGGTTGCAGGACCGAGACCCACATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR TCA 90 bp TCCTCAGGGTCCCCATGGCGTATGTACAAGCGGCAGAGGGCTGGGCTGGGCTGGGAGGCCGGGTGGCACTaGGGACAAGAAATCCCCAGG +
Preference number: 4 (lower is better)
Translates to: SSGSPWRMYKRQRAGLGWEAGWH*GQEIPR
Trigger: CCTGGGGATTTCTTGTCCTCAGTGCCACCCGGCCTC...CCAGCCCAGCCCAGCCCTCTGCCGCTTGTACATACGCCATGGGGACCCTGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR TCA 90 bp TCCTCAGGGTCCCCATGGCGTATGTACAAGCGGCAGAGGGCTGGGCTGGGCTGGCGGGGCTTCCCCAGGTaGTACCGAAGGAGCCATAGG +
Preference number: 4 (lower is better)
Translates to: SSGSPWRMYKRQRAGLGWRGFPR*YRRSHR
Trigger: CCTATGGCTCCTTCGGTATCACCTGGGGAAGCCCCG...CCAGCCCAGCCCAGCCCTCTGCCGCTTGTACATACGCCATGGGGACCCTGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR GCA 90 bp GGGGCGGCACAGGGATTGACGTGGCCTCAGTTCCTCAGGGTCCCCATGGCGTATCCCACCCACTCCACCTaGCCAGCTGTGTCCCCTACC +
Preference number: 4 (lower is better)
Translates to: GAAQGLTWPQFLRVPMAYPTHST*PAVSPT
Trigger: GGTAGGGGACACAGCTGGGCAGGTGGAGTGGGTGGG...ATACGCCATGGGGACCCTGAGGAACTGAGGCCACGTCAATCCCTGTGCCGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR GCA 90 bp CCCCAAATGCCTCCCAGGTGGACGCGGGTCTGGGTGGATTGGCTCCCCAGCTCCTGGGCATCTCACCCGTaGCCCCAATGCCTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: PQMPPRWTRVWVDWLPSSWASHP*PQCLCC
Trigger: GCAGCAAAGGCATTGGGGGCACGGGTGAGATGCCCA...GGAGCTGGGGAGCCAATCCACCCAGACCCGCGTCCACCTGGGAGGCATTTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp GCCAGTGGACAGCAGGAGTGTCGGGGGTGTGGCAGCTGGCCTGGGTCCCTGGAGAGAAGATGGGCAGACTaGGACAGCCATCCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: ASGQQECRGCGSWPGSLERRWAD*DSHPAH
Trigger: GTGGGCAGGATGGCTGTCCCAGTCTGCCCATCTTCT...CTCCAGGGACCCAGGCCAGCTGCCACACCCCCGACACTCCTGCTGTCCACTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp TGCAGCCCTAGGAGGAATTGCAGTGGGGCTCAGGGCTCTGCCGGGCTTCCTGGGCGGGTCTGGGTGGATTaGCTCCCCAGCTCCCACTTC +
Preference number: 4 (lower is better)
Translates to: CSPRRNCSGAQGSAGLPGRVWVD*LPSSHF
Trigger: GAAGTGGGAGCTGGGGAGCCAATCCACCCAGACCCG...CCCAGGAAGCCCGGCAGAGCCCTGAGCCCCACTGCAATTCCTCCTAGGGCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp ACACCTCGTCTCCCTTCCCAAGGCAGACGGAGCTCCCAGCACAGGGGAGAGAGAGGACGCGGGTCTGGGTaGATTGGCTCCCCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: TPRLPSQGRRSSQHRGERGRGSG*IGSPAP
Trigger: GGGAGCTGGGGAGCCAATCCACCCAGACCCGCGTCC...TCTCTCTCCCCTGTGCTGGGAGCTCCGTCTGCCTTGGGAAGGGAGACGAGGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp GATGTGGGTCTCGGTCCTGCAACCCCAAATGCCTCCCAGGTGGACGCGGGTCTGGGCCACTGCACATGCTaGCTGCACGCTCCCCCAGTG +
Preference number: 4 (lower is better)
Translates to: DVGLGPATPNASQVDAGLGHCTC*LHAPPV
Trigger: CACTGGGGGAGCGTGCAGCCAGCATGTGCAGTGGCC...CAGACCCGCGTCCACCTGGGAGGCATTTGGGGTTGCAGGACCGAGACCCACATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR TCA 90 bp TTGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGAACGGGGAAGGGGTCCCTaGGGCCCGGGTGGCCGCTTG +
Preference number: 4 (lower is better)
Translates to: LAASFISGLAGAQGRDRERGRGP*GPGGRL
Trigger: CAAGCGGCCACCCGGGCCTCAGGGACCCCTTCCCCG...TTCCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR TCA 90 bp ACACCTCGTCTCCCTTCCCAAGGCAGACGGAGCTCCCAGCACAGGGGAGAGAGATGGGGGTTGGAGGGCTaGCGCACACCCTGCCTGAGA +
Preference number: 4 (lower is better)
Translates to: TPRLPSQGRRSSQHRGERWGLEG*RTPCLR
Trigger: TCTCAGGCAGGGTGTGCGTCAGCCCTCCAACCCCCA...TCTCTCTCCCCTGTGCTGGGAGCTCCGTCTGCCTTGGGAAGGGAGACGAGGTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR TCA 90 bp GATGTGGGTCTCGGTCCTGCAACCCCAAATGCCTCCCAGGTGGACGCGGGTCTGAGGTCTGGGGAGGTCTaGGGAGAGCTCGGGCCAGAT +
Preference number: 4 (lower is better)
Translates to: DVGLGPATPNASQVDAGLRSGEV*GELGPD
Trigger: ATCTGGCCCGAGCTCTCCTCAGACCTCCCCAGACCT...CAGACCCGCGTCCACCTGGGAGGCATTTGGGGTTGCAGGACCGAGACCCACATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR GCA 90 bp GATGGGGCTGGGAAGGAACAGCACACCTCGTCTCCCTTCCCAAGGCAGACGGAGCTGGGACAGCCATCCTaGCCACCCACTCCACCTGCC +
Preference number: 4 (lower is better)
Translates to: DGAGKEQHTSSPFPRQTELGQPS*PPTPPA
Trigger: GGCAGGTGGAGTGGGTGGGCAGGATGGCTGTCCCAG...CTCCGTCTGCCTTGGGAAGGGAGACGAGGTGTGCTGTTCCTTCCCAGCCCCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR GCA 90 bp TGCAGCCCTAGGAGGAATTGCAGTGGGGCTCAGGGCTCTGCCGGGCTTCCTGGGTCCCGGGCCCCCATCTaGAGCTTCCAGAAGAGGACT +
Preference number: 4 (lower is better)
Translates to: CSPRRNCSGAQGSAGLPGSRAPI*SFQKRT
Trigger: AGTCCTCTTCTGGAAGCTGCAGATGGGGGCCCGGGA...CCCAGGAAGCCCGGCAGAGCCCTGAGCCCCACTGCAATTCCTCCTAGGGCTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp GGTTGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGGCCCGGGTGGCCGCTTaGGTAACCGCAGCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: GWQLVLYLVSQERRGGTGARVAA*VTAACL
Trigger: CAGGCAGGCTGCGGTTACCCAAGCGGCCACCCGGGC...CCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp GATGTGGGTCTCGGTCCTGCAACCCCAAATGCCTCCCAGGTGGACGCGGGTCTGAGCTGGAGCTGCTGCTaGGGTCCACATAGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: DVGLGPATPNASQVDAGLSWSCC*GPHRPS
Trigger: GCTGGGCCTATGTGGACCCCAGCAGCAGCTCCAGCT...CAGACCCGCGTCCACCTGGGAGGCATTTGGGGTTGCAGGACCGAGACCCACATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp GGGGCGGCACAGGGATTGACGTGGCCTCAGTTCCTCAGGGTCCCCATGGCGTATTTCTCTGGAGGACGGTaGGGCAGGGAGGGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: GAAQGLTWPQFLRVPMAYFSGGR*GREGSS
Trigger: TGAGGAGCCCTCCCTGCCCCACCGTCCTCCAGAGAA...ATACGCCATGGGGACCCTGAGGAACTGAGGCCACGTCAATCCCTGTGCCGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp TGCAGCCCTAGGAGGAATTGCAGTGGGGCTCAGGGCTCTGCCGGGCTTCCTGGGTTACATGGGACCAGCTaGAGGGACTGGCCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: CSPRRNCSGAQGSAGLPGLHGTS*RDWPWL
Trigger: CAGCCAGGGCCAGTCCCTCCAGCTGGTCCCATGTAA...CCCAGGAAGCCCGGCAGAGCCCTGAGCCCCACTGCAATTCCTCCTAGGGCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp TCCTCAGGGTCCCCATGGCGTATGTACAAGCGGCAGAGGGCTGGGCTGGGCTGGGGAGGTGGAGGAGGGTaGGAACCGGGTGAGAAAGTC +
Preference number: 4 (lower is better)
Translates to: SSGSPWRMYKRQRAGLGWGGGGG*EPGEKV
Trigger: GACTTTCTCACCCGGTTCCCACCCTCCTCCACCTCC...CCAGCCCAGCCCAGCCCTCTGCCGCTTGTACATACGCCATGGGGACCCTGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp ACCCACCTCTCTGCGCTCTCATGTGGTCTCATTCCGGCCCCCACCCAGGCCCAGAGGACACCTGGGACTTaGCTTCAGGTGGGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: THLSALSCGLIPAPTQAQRTPGT*LQVGQG
Trigger: TCCCTGGCCCACCTGAAGCCAAGTCCCAGGTGTCCT...CTGGGCCTGGGTGGGGGCCGGAATGAGACCACATGAGAGCGCAGAGAGGTGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp AGGGAACAGGTGCGGACACTGGGGAACTTGCAGGAGCTAAGGCCAGTGGACAGCGGAGTGTCGGGGGTGTaGCAGCTGGCCTGGGTCCCT +
Preference number: 4 (lower is better)
Translates to: REQVRTLGNLQELRPVDSGVSGV*QLAWVP
Trigger: AGGGACCCAGGCCAGCTGCCACACCCCCGACACTCC...GCTGTCCACTGGCCTTAGCTCCTGCAAGTTCCCCAGTGTCCGCACCTGTTCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR GCA 90 bp GGGTTGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGTCGCCATGCACCTGCTaGTGCCCCTCGGTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: GLAASFISGLAGAQGRDRSPCTC*CPSVPG
Trigger: CCCTGGGACCGAGGGGCAGCAGCAGGTGCATGGCGA...CCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCAACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320634.8
ENST00000550890.5
CDS-3UTR GCA 90 bp GGGGCGGCACAGGGATTGACGTGGCCTCAGTTCCTCAGGGTCCCCATGGCGTATTCCTTCTTCTCGCCATaGACCTGCTGCTGCCCCTCG +
Preference number: 4 (lower is better)
Translates to: GAAQGLTWPQFLRVPMAYSFFSP*TCCCPS
Trigger: CGAGGGGCAGCAGCAGGTGCATGGCGAGAAGAAGGA...ATACGCCATGGGGACCCTGAGGAACTGAGGCCACGTCAATCCCTGTGCCGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR GCA 90 bp CCCCCAGAACATCCAGCCGGAGGGCCCAATCACACCTCACTCAGCCTTAGGCCTTCCTGCAACCCCAAATaGCTCCCAGGTGGACGCGGG +
Preference number: 4 (lower is better)
Translates to: PPEHPAGGPNHTSLSLRPSCNPK*LPGGRG
Trigger: CCCGCGTCCACCTGGGAGGCATTTGGGGTTGCAGGA...AGGCCTAAGGCTGAGTGAGGTGTGATTGGGCCCTCCGGCTGGATGTTCTGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp CAGCACACCTCGTCTCCCTTCCCAAGGCAGACGGAGCTCCCAGCACAGGGGAGAGCTTTCCCTGGGTCATaGTGCCGTCTCTCGGGGAAG +
Preference number: 4 (lower is better)
Translates to: QHTSSPFPRQTELPAQGRAFPGS*CRLSGK
Trigger: CTTCCCCGAGAGACGGCACCATGACCCAGGGAAAGC...TCTCCCCTGTGCTGGGAGCTCCGTCTGCCTTGGGAAGGGAGACGAGGTGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp TCCTCAGGGTCCCCATGGCGTATGTACAAGCGGCAGAGGGCTGGGCTGGGCTGGCAGGAGGACACAGACTaGATGCAGGACAGTGTGCCC +
Preference number: 4 (lower is better)
Translates to: SSGSPWRMYKRQRAGLGWQEDTD*MQDSVP
Trigger: GGGCACACTGTCCTGCATCCAGTCTGTGTCCTCCTG...CCAGCCCAGCCCAGCCCTCTGCCGCTTGTACATACGCCATGGGGACCCTGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp GATGTGGGTCTCGGTCCTGCAACCCCAAATGCCTCCCAGGTGGACGCGGGTCTGCCTTCCAGATGGGGCTaGCCTGGCAGCTACAGCGAT +
Preference number: 4 (lower is better)
Translates to: DVGLGPATPNASQVDAGLPSRWG*PGSYSD
Trigger: ATCGCTGTAGCTGCCAGGCCAGCCCCATCTGGAAGG...CAGACCCGCGTCCACCTGGGAGGCATTTGGGGTTGCAGGACCGAGACCCACATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp GATGGGGCTGGGAAGGAACAGCACACCTCGTCTCCCTTCCCAAGGCAGACGGAGCTCAGGAGGCCTGGCTaGGGACGAGCCAGCAAACAG +
Preference number: 4 (lower is better)
Translates to: DGAGKEQHTSSPFPRQTELRRPG*GRASKQ
Trigger: CTGTTTGCTGGCTCGTCCCCAGCCAGGCCTCCTGAG...CTCCGTCTGCCTTGGGAAGGGAGACGAGGTGTGCTGTTCCTTCCCAGCCCCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp ACCCACCTCTCTGCGCTCTCATGTGGTCTCATTCCGGCCCCCACCCAGGCCCAGGAGATCCCAGCCGCCTaGAAGCTGATAAGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: THLSALSCGLIPAPTQAQEIPAA*KLIRSP
Trigger: AGGGCTCCTTATCAGCTTCCAGGCGGCTGGGATCTC...CTGGGCCTGGGTGGGGGCCGGAATGAGACCACATGAGAGCGCAGAGAGGTGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR TCA 90 bp CATCAGCAACTGGGTGTCAAGTGCCAGGAACAATGTAAATACACCCGCTCCCAGCGGGGAAGGGGTCCCTaGGGCCCGGGTGGCCGCTTG +
Preference number: 4 (lower is better)
Translates to: HQQLGVKCQEQCKYTRSQRGRGP*GPGGRL
Trigger: CAAGCGGCCACCCGGGCCTCAGGGACCCCTTCCCCG...CTGGGAGCGGGTGTATTTACATTGTTCCTGGCACTTGACACCCAGTTGCTGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550195.5
CDS-3UTR TCA 90 bp AGCCTTGACCGTCCCAGTTTGGAAGATGTAACGGGCGAATGGGGCGGCACAGGGGGGCGGCACAGGGATTaGCGTGGCCTCAGTTCCTCA +
Preference number: 4 (lower is better)
Translates to: SLDRPSLEDVTGEWGGTGGRHRD*RGLSSS
Trigger: TGAGGAACTGAGGCCACGTCAATCCCTGTGCCGCCC...CCCTGTGCCGCCCCATTCGCCCGTTACATCTTCCAAACTGGGACGGTCAAGGCT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR TCA 90 bp AAGCTGATAAGGAGCCCTGGCCTCATTACATGGGACCAGCTGGAGGGACTGGCCGACGCACACCCTGCCTaGGATCCCAGCCGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: KLIRSPGLITWDQLEGLADAHPA*DPSRLE
Trigger: TTCCAGGCGGCTGGGATCTCAGGCAGGGTGTGCGTC...GGCCAGTCCCTCCAGCTGGTCCCATGTAATGAGGCCAGGGCTCCTTATCAGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR TCA 90 bp CCCCCAGAACATCCAGCCGGAGGGCCCAATCACACCTCACTCAGCCTTAGGCCTCCTCTGCTACGGACATaGGCAGAGCGCTGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: PPEHPAGGPNHTSLSLRPPLLRT*AERCLW
Trigger: CCAGAGACAGCGCTCTGCTCATGTCCGTAGCAGAGG...AGGCCTAAGGCTGAGTGAGGTGTGATTGGGCCCTCCGGCTGGATGTTCTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR GCA 90 bp CAGCACACCTCGTCTCCCTTCCCAAGGCAGACGGAGCTCCCAGCACAGGGGAGAGGCAGCTACAGCGATTaGCTCCTCCCCCAGAACATC +
Preference number: 4 (lower is better)
Translates to: QHTSSPFPRQTELPAQGRGSYSD*LLPQNI
Trigger: GATGTTCTGGGGGAGGAGGCAATCGCTGTAGCTGCC...TCTCCCCTGTGCTGGGAGCTCCGTCTGCCTTGGGAAGGGAGACGAGGTGTGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR GCA 90 bp GGTTGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGGGCTGCGGCATCTTCTaGCCGGCTTCCCCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: GWQLVLYLVSQERRGGTGGCGIF*PASPAL
Trigger: CAGAGCTGGGGAAGCCGGGCAGAAGATGCCGCAGCC...CCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR GCA 90 bp AAGCTGATAAGGAGCCCTGGCCTCATTACATGGGACCAGCTGGAGGGACTGGCCGCTCGGGCCAGATCCTaGCCCCAACCTCCAGCCACA +
Preference number: 4 (lower is better)
Translates to: KLIRSPGLITWDQLEGLAARARS*PQPPAT
Trigger: TGTGGCTGGAGGTTGGGGGCAGGATCTGGCCCGAGC...GGCCAGTCCCTCCAGCTGGTCCCATGTAATGAGGCCAGGGCTCCTTATCAGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp GGCTCAGCGAGTGGCGTCGGTTACCCATCAGCAACTGGGTGTCAAGTGCCAGGAAGCTGGAGCTGCTGCTaGGGTCCACATAGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: GSASGVGYPSATGCQVPGSWSCC*GPHRPS
Trigger: GCTGGGCCTATGTGGACCCCAGCAGCAGCTCCAGCT...TCCTGGCACTTGACACCCAGTTGCTGATGGGTAACCGACGCCACTCGCTGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550195.5
CDS-3UTR CCA 90 bp TCCTCAGGGTCCCCATGGCGTATGTACAAGCGGCAGAGGGCTGGGCTGGGCTGGAGGGGAAATGCCTCCTaGGTCCAGAACAGCAAGCCA +
Preference number: 4 (lower is better)
Translates to: SSGSPWRMYKRQRAGLGWRGNAS*VQNSKP
Trigger: TGGCTTGCTGTTCTGGACCCAGGAGGCATTTCCCCT...CCAGCCCAGCCCAGCCCTCTGCCGCTTGTACATACGCCATGGGGACCCTGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp TCCTCAGGGTCCCCATGGCGTATGTACAAGCGGCAGAGGGCTGGGCTGGGCTGGAGCCAGGGCACATATTaGAAGGGTAGGAGGATGGCC +
Preference number: 4 (lower is better)
Translates to: SSGSPWRMYKRQRAGLGWSQGTY*KGRRMA
Trigger: GGCCATCCTCCTACCCTTCCAATATGTGCCCTGGCT...CCAGCCCAGCCCAGCCCTCTGCCGCTTGTACATACGCCATGGGGACCCTGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp GGTTGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGGAGGGGCGCATTCTCTaGAGGACGGTGGGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: GWQLVLYLVSQERRGGTGEGRIL*RTVGQG
Trigger: TCCCTGCCCCACCGTCCTCCAGAGAATGCGCCCCTC...CCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000320634.8
ENST00000550890.5
CDS-3UTR CCA 90 bp AGCCTTGACCGTCCCAGTTTGGAAGATGTAACGGGCGAATGGGGCGGCACAGGGGGGACTCCTTCCAGATaGGGCTGGCCTGGCAGCTAC +
Preference number: 4 (lower is better)
Translates to: SLDRPSLEDVTGEWGGTGGTPSR*GWPGSY
Trigger: GTAGCTGCCAGGCCAGCCCCATCTGGAAGGAGTCCC...CCCTGTGCCGCCCCATTCGCCCGTTACATCTTCCAAACTGGGACGGTCAAGGCT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp CCCCAAATGCCTCCCAGGTGGACGCGGGTCTGGGTGGATTGGCTCCCCAGCTCCTCTGGGCTGAGTGAGTaGCCAGTGAAGCTAGAAGAG +
Preference number: 4 (lower is better)
Translates to: PQMPPRWTRVWVDWLPSSSGLSE*PVKLEE
Trigger: CTCTTCTAGCTTCACTGGCCACTCACTCAGCCCAGA...GGAGCTGGGGAGCCAATCCACCCAGACCCGCGTCCACCTGGGAGGCATTTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp CCCCCAGAACATCCAGCCGGAGGGCCCAATCACACCTCACTCAGCCTTAGGCCTCTCTGCGCTCTCATGTaGTCTCATTCCGGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: PPEHPAGGPNHTSLSLRPLCALM*SHSGPH
Trigger: GTGGGGGCCGGAATGAGACCACATGAGAGCGCAGAG...AGGCCTAAGGCTGAGTGAGGTGTGATTGGGCCCTCCGGCTGGATGTTCTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp GATGGGGCTGGGAAGGAACAGCACACCTCGTCTCCCTTCCCAAGGCAGACGGAGACAGTGGCAGGAGAGTaGGGTGCTGGGGCTAACCCT +
Preference number: 4 (lower is better)
Translates to: DGAGKEQHTSSPFPRQTETVAGE*GAGANP
Trigger: AGGGTTAGCCCCAGCACCCCACTCTCCTGCCACTGT...CTCCGTCTGCCTTGGGAAGGGAGACGAGGTGTGCTGTTCCTTCCCAGCCCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR TCA 90 bp GATGGGGCTGGGAAGGAACAGCACACCTCGTCTCCCTTCCCAAGGCAGACGGAGGGGTGGAGAAGTGAGTaGGAGGATGTGGGTCTCGGT +
Preference number: 4 (lower is better)
Translates to: DGAGKEQHTSSPFPRQTEGWRSE*EDVGLG
Trigger: ACCGAGACCCACATCCTCTCACTCACTTCTCCACCC...CTCCGTCTGCCTTGGGAAGGGAGACGAGGTGTGCTGTTCCTTCCCAGCCCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR TCA 90 bp AGGGCCATTCACAGCAAGCAGCAGACAGCACAGGCTTCAGACCCTCTCCTATTGAGGCAGCTGTGGGTCTaGACCCCAGGCCCGCCACTC +
Preference number: 4 (lower is better)
Translates to: RAIHSKQQTAQASDPLLLRQLWV*TPGPPL
Trigger: GAGTGGCGGGCCTGGGGTTCAGACCCACAGCTGCCT...CAATAGGAGAGGGTCTGAAGCCTGTGCTGTCTGCTGCTTGCTGTGAATGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR TCA 90 bp CCCAGTTTGGAAGATGTAACGGGCGAATGGGGCGGCACAGGGATTGACGTGGCCGCCCAGGGGCAAGCGTaGTACCCTGTTTGCTTGAGG +
Preference number: 4 (lower is better)
Translates to: PSLEDVTGEWGGTGIDVAAQGQA*YPVCLR
Trigger: CCTCAAGCAAACAGGGTATCACGCTTGCCCCTGGGC...GGCCACGTCAATCCCTGTGCCGCCCCATTCGCCCGTTACATCTTCCAAACTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR TCA 90 bp TGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGAACCACATGGGCCCTCGGTaGCTCTCCCAAACCAGGCCC +
Preference number: 4 (lower is better)
Translates to: WQLVLYLVSQERRGGTGNHMGPR*LSQTRP
Trigger: GGGCCTGGTTTGGGAGAGTCACCGAGGGCCCATGTG...GTTCCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR TCA 90 bp GGTTGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGCTGCATGTGGCCCACTaGGAGGCAGGGCCTAGGCAT +
Preference number: 4 (lower is better)
Translates to: GWQLVLYLVSQERRGGTGLHVAH*EAGPRH
Trigger: ATGCCTAGGCCCTGCCTCTCAGTGGGCCACATGCAG...CCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550890.5
CDS-3UTR GCA 90 bp AAGCTGATAAGGAGCCCTGGCCTCATTACATGGGACCAGCTGGAGGGACTGGCCTTCCCTGGGTCATGGTaGCGTCTCTCGGGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: KLIRSPGLITWDQLEGLAFPGSW*RLSGKG
Trigger: CCCCTTCCCCGAGAGACGGCACCATGACCCAGGGAA...GGCCAGTCCCTCCAGCTGGTCCCATGTAATGAGGCCAGGGCTCCTTATCAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR GCA 90 bp AGGGCTCCAAAAATATACTCCTCAGGGCTCAGCGAGTGGCGTCGGTTACCCATCTCGCCATGCACCTGCTaGTGCCCCTCGGTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: RAPKIYSSGLSEWRRLPISPCTC*CPSVPG
Trigger: CCCTGGGACCGAGGGGCAGCAGCAGGTGCATGGCGA...GATGGGTAACCGACGCCACTCGCTGAGCCCTGAGGAGTATATTTTTGGAGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550195.5
CDS-3UTR GCA 90 bp CCCCCAGAACATCCAGCCGGAGGGCCCAATCACACCTCACTCAGCCTTAGGCCTCCTGCCCTCACCTCCTaGCCCAAAAGAGCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: PPEHPAGGPNHTSLSLRPPALTS*PKRALS
Trigger: TGACAGAGCTCTTTTGGGGCAGGAGGTGAGGGCAGG...AGGCCTAAGGCTGAGTGAGGTGTGATTGGGCCCTCCGGCTGGATGTTCTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR GCA 90 bp CCCCAAATGCCTCCCAGGTGGACGCGGGTCTGGGTGGATTGGCTCCCCAGCTCCCGGCTTCCCCAGCTCTaGAAAGAAGCCATTTCTCAA +
Preference number: 4 (lower is better)
Translates to: PQMPPRWTRVWVDWLPSSRLPQL*KEAISQ
Trigger: TTGAGAAATGGCTTCTTTGCAGAGCTGGGGAAGCCG...GGAGCTGGGGAGCCAATCCACCCAGACCCGCGTCCACCTGGGAGGCATTTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR GCA 90 bp AAGCTGATAAGGAGCCCTGGCCTCATTACATGGGACCAGCTGGAGGGACTGGCCCCCAGAGTAGGAGGCTaGGGCATCTTCTGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: KLIRSPGLITWDQLEGLAPRVGG*GIFCPA
Trigger: AGCCGGGCAGAAGATGCCGCAGCCTCCTACTCTGGG...GGCCAGTCCCTCCAGCTGGTCCCATGTAATGAGGCCAGGGCTCCTTATCAGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR GCA 90 bp GCCAGTGGACAGCAGGAGTGTCGGGGGTGTGGCAGCTGGCCTGGGTCCCTGGAGTGGAGGGCAGCAAAGTaGTTATGCAAAAATCCCACC +
Preference number: 4 (lower is better)
Translates to: ASGQQECRGCGSWPGSLEWRAAK*LCKNPT
Trigger: GGTGGGATTTTTGCATAAGCACTTTGCTGCCCTCCA...CTCCAGGGACCCAGGCCAGCTGCCACACCCCCGACACTCCTGCTGTCCACTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp GGGCTCAGCGAGTGGCGTCGGTTACCCATCAGCAACTGGGTGTCAAGTGCCAGGACGGAGAGCTTTCCCTaGGTCATGGTGCCGTCTCTC +
Preference number: 4 (lower is better)
Translates to: GLSEWRRLPISNWVSSARTESFP*VMVPSL
Trigger: GAGAGACGGCACCATGACCCAGGGAAAGCTCTCCGT...CCTGGCACTTGACACCCAGTTGCTGATGGGTAACCGACGCCACTCGCTGAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550195.5
CDS-3UTR CCA 90 bp CCCAGTTTGGAAGATGTAACGGGCGAATGGGGCGGCACAGGGATTGACGTGGCCTCCCCTCCCCAGAGGTaGCTTCCTCATAGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: PSLEDVTGEWGGTGIDVASPPQR*LPHRRV
Trigger: CACCCTCCTATGAGGAAGCCACCTCTGGGGAGGGGA...GGCCACGTCAATCCCTGTGCCGCCCCATTCGCCCGTTACATCTTCCAAACTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp GATGTGGGTCTCGGTCCTGCAACCCCAAATGCCTCCCAGGTGGACGCGGGTCTGGCTCATGGTCTCCGGTaGGGAAACCGTTGTCATAGC +
Preference number: 4 (lower is better)
Translates to: DVGLGPATPNASQVDAGLAHGLR*GNRCHS
Trigger: GCTATGACAACGGTTTCCCCACCGGAGACCATGAGC...CAGACCCGCGTCCACCTGGGAGGCATTTGGGGTTGCAGGACCGAGACCCACATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp ACACCTCGTCTCCCTTCCCAAGGCAGACGGAGCTCCCAGCACAGGGGAGAGAGATGCCCAGTACCAGCCTaGGTTGGCCTGGACATAGTC +
Preference number: 4 (lower is better)
Translates to: TPRLPSQGRRSSQHRGERCPVPA*VGLDIV
Trigger: GACTATGTCCAGGCCAACCCAGGCTGGTACTGGGCA...TCTCTCTCCCCTGTGCTGGGAGCTCCGTCTGCCTTGGGAAGGGAGACGAGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp GATGGGGCTGGGAAGGAACAGCACACCTCGTCTCCCTTCCCAAGGCAGACGGAGACCAGCTGGAGGGACTaGCCCTGGCTGTTAGCATCA +
Preference number: 4 (lower is better)
Translates to: DGAGKEQHTSSPFPRQTETSWRD*PWLLAS
Trigger: TGATGCTAACAGCCAGGGCCAGTCCCTCCAGCTGGT...CTCCGTCTGCCTTGGGAAGGGAGACGAGGTGTGCTGTTCCTTCCCAGCCCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp ACCCACCTCTCTGCGCTCTCATGTGGTCTCATTCCGGCCCCCACCCAGGCCCAGGCTGATAAGGAGCCCTaGCCTCATTACATGGGACCA +
Preference number: 4 (lower is better)
Translates to: THLSALSCGLIPAPTQAQADKEP*PHYMGP
Trigger: TGGTCCCATGTAATGAGGCCAGGGCTCCTTATCAGC...CTGGGCCTGGGTGGGGGCCGGAATGAGACCACATGAGAGCGCAGAGAGGTGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp AGGGCCATTCACAGCAAGCAGCAGACAGCACAGGCTTCAGACCCTCTCCTATTGCACGCTCCCCCAGTGTaGCCTCCTGGTTCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: RAIHSKQQTAQASDPLLLHAPPV*PPGSLP
Trigger: GGGGAGGGAACCAGGAGGCCACACTGGGGGAGCGTG...CAATAGGAGAGGGTCTGAAGCCTGTGCTGTCTGCTGCTTGCTGTGAATGGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp CCCAGTTTGGAAGATGTAACGGGCGAATGGGGCGGCACAGGGATTGACGTGGCCCCACTGGCCTGGAGTTaGCCACTGCACATGCTGGCT +
Preference number: 4 (lower is better)
Translates to: PSLEDVTGEWGGTGIDVAPLAWS*PLHMLA
Trigger: AGCCAGCATGTGCAGTGGCCAACTCCAGGCCAGTGG...GGCCACGTCAATCCCTGTGCCGCCCCATTCGCCCGTTACATCTTCCAAACTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp CACAGTAACTTTCCACTGGCCTGGAGTTGGCCACTGCACATGCTGGCTGCACGCCAACCTCCAGCCACATaGGCCCTCGGTGACTCTCCC +
Preference number: 4 (lower is better)
Translates to: HSNFPLAWSWPLHMLAARQPPAT*ALGDSP
Trigger: GGGAGAGTCACCGAGGGCCCATGTGGCTGGAGGTTG...GCGTGCAGCCAGCATGTGCAGTGGCCAACTCCAGGCCAGTGGAAAGTTACTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp AAGCTGATAAGGAGCCCTGGCCTCATTACATGGGACCAGCTGGAGGGACTGGCCGGCTCAGGGAGGGCTTaGGAGGGGGTACACTGTGTC +
Preference number: 4 (lower is better)
Translates to: KLIRSPGLITWDQLEGLAGSGRA*EGVHCV
Trigger: GACACAGTGTACCCCCTCCCAAGCCCTCCCTGAGCC...GGCCAGTCCCTCCAGCTGGTCCCATGTAATGAGGCCAGGGCTCCTTATCAGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR TCA 90 bp TTGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGAAATAGGAGGGTGGGGCTaGGGGCACTGCTGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: LAASFISGLAGAQGRDREIGGWG*GHCWSL
Trigger: GAGGCTCCAGCAGTGCCCTCAGCCCCACCCTCCTAT...TTCCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000320634.8
ENST00000550890.5
CDS-3UTR TCA 90 bp GGGTTGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGCTGAAGACGGTGACTaGGAGGCAGACAAGGGCCGT +
Preference number: 4 (lower is better)
Translates to: GLAASFISGLAGAQGRDRAEDGD*EADKGR
Trigger: ACGGCCCTTGTCTGCCTCTCAGTCACCGTCTTCAGC...CCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320634.8
ENST00000550890.5
CDS-3UTR TCA 90 bp AGGGAACAGGTGCGGACACTGGGGAACTTGCAGGAGCTAAGGCCAGTGGACAGCTGCCCTAAGGCCACATaGTTGTGCAGCCCTAGGAGG +
Preference number: 4 (lower is better)
Translates to: REQVRTLGNLQELRPVDSCPKAT*LCSPRR
Trigger: CCTCCTAGGGCTGCACAATCATGTGGCCTTAGGGCA...GCTGTCCACTGGCCTTAGCTCCTGCAAGTTCCCCAGTGTCCGCACCTGTTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR TCA 90 bp GATGGGGCTGGGAAGGAACAGCACACCTCGTCTCCCTTCCCAAGGCAGACGGAGATGACCAAGGCTATCTaGCAGTGGCAGGAGAGTGGG +
Preference number: 4 (lower is better)
Translates to: DGAGKEQHTSSPFPRQTEMTKAI*QWQESG
Trigger: CCCACTCTCCTGCCACTGTCAGATAGCCTTGGTCAT...CTCCGTCTGCCTTGGGAAGGGAGACGAGGTGTGCTGTTCCTTCCCAGCCCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR TCA 90 bp CCCAGTTTGGAAGATGTAACGGGCGAATGGGGCGGCACAGGGATTGACGTGGCCCCCAGGCCAAAAATGTaGAGGGCCTGCAGACTCCCT +
Preference number: 4 (lower is better)
Translates to: PSLEDVTGEWGGTGIDVAPRPKM*RACRLP
Trigger: AGGGAGTCTGCAGGCCCTTCACATTTTTGGCCTGGG...GGCCACGTCAATCCCTGTGCCGCCCCATTCGCCCGTTACATCTTCCAAACTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR GCA 90 bp AGGGAACAGGTGCGGACACTGGGGAACTTGCAGGAGCTAAGGCCAGTGGACAGCTGGGTAACCGCAGCCTaGCTGCGTCTCTTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: REQVRTLGNLQELRPVDSWVTAA*LRLFLP
Trigger: AGGAAGGAAGAGACGCAGGCAGGCTGCGGTTACCCA...GCTGTCCACTGGCCTTAGCTCCTGCAAGTTCCCCAGTGTCCGCACCTGTTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR GCA 90 bp GGGTTGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGTCCTTCTTCTCGCCATaGACCTGCTGCTGCCCCTCG +
Preference number: 4 (lower is better)
Translates to: GLAASFISGLAGAQGRDRSFFSP*TCCCPS
Trigger: CGAGGGGCAGCAGCAGGTGCATGGCGAGAAGAAGGA...CCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320634.8
ENST00000550890.5
CDS-3UTR GCA 90 bp CCCCAAATGCCTCCCAGGTGGACGCGGGTCTGGGTGGATTGGCTCCCCAGCTCCCAGGGTCAGGTAGGTTaGAAAGAACACAGCATAGGA +
Preference number: 4 (lower is better)
Translates to: PQMPPRWTRVWVDWLPSSQGQVG*KEHSIG
Trigger: TCCTATGCTGTGTTCTTTGCAACCTACCTGACCCTG...GGAGCTGGGGAGCCAATCCACCCAGACCCGCGTCCACCTGGGAGGCATTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR GCA 90 bp GATGGGGCTGGGAAGGAACAGCACACCTCGTCTCCCTTCCCAAGGCAGACGGAGAGGTTCCAGGGGAAATaGCTCCTGGGTCCAGAACAG +
Preference number: 4 (lower is better)
Translates to: DGAGKEQHTSSPFPRQTERFQGK*LLGPEQ
Trigger: CTGTTCTGGACCCAGGAGGCATTTCCCCTGGAACCT...CTCCGTCTGCCTTGGGAAGGGAGACGAGGTGTGCTGTTCCTTCCCAGCCCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR GCA 90 bp GGGTTGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGCCCCAATGCCTTTGCTaGACACACACCACCCGCCAG +
Preference number: 4 (lower is better)
Translates to: GLAASFISGLAGAQGRDRPQCLC*THTTRQ
Trigger: CTGGCGGGTGGTGTGTGTGCAGCAAAGGCATTGGGG...CCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR GCA 90 bp AAGCTGATAAGGAGCCCTGGCCTCATTACATGGGACCAGCTGGAGGGACTGGCCCCCTGGAGCTGTGTCTaGCCTCAGGGACTCAGGAGA +
Preference number: 4 (lower is better)
Translates to: KLIRSPGLITWDQLEGLAPWSCV*PQGLRR
Trigger: TCTCCTGAGTCCCTGAGGGCAGACACAGCTCCAGGG...GGCCAGTCCCTCCAGCTGGTCCCATGTAATGAGGCCAGGGCTCCTTATCAGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp CAGCACACCTCGTCTCCCTTCCCAAGGCAGACGGAGCTCCCAGCACAGGGGAGACTTCCTTCCTCCGCGTaGGTTCTAGCAACATCCACT +
Preference number: 4 (lower is better)
Translates to: QHTSSPFPRQTELPAQGRLPSSA*VLATST
Trigger: AGTGGATGTTGCTAGAACCCACGCGGAGGAAGGAAG...TCTCCCCTGTGCTGGGAGCTCCGTCTGCCTTGGGAAGGGAGACGAGGTGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp GAGGGGCGCATTCTCTGGAGGACGGTGGGGCAGGGAGGGCTCCTCATTCTCGGTTTACCCATCAGCAACTaGGTGTCAAGTGCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: EGRILWRTVGQGGLLILGLPISN*VSSARN
Trigger: GTTCCTGGCACTTGACACCCAGTTGCTGATGGGTAA...ACCGAGAATGAGGAGCCCTCCCTGCCCCACCGTCCTCCAGAGAATGCGCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550195.5
CDS-3UTR CCA 90 bp GGTTGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGTCAGGGCTCAGCGAGTaGCGTCGGTTACCCATCAGC +
Preference number: 4 (lower is better)
Translates to: GWQLVLYLVSQERRGGTGSGLSE*RRLPIS
Trigger: GCTGATGGGTAACCGACGCCACTCGCTGAGCCCTGA...CCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320634.8
ENST00000550890.5
CDS-3UTR CCA 90 bp CAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGAACCAGTTCTCTGGAGGACGGTaGGGCAGGGAGGGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: QLVLYLVSQERRGGTGNQFSGGR*GREGSS
Trigger: TGAGGAGCCCTCCCTGCCCCACCGTCCTCCAGAGAA...CTGGTTCCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320634.8
ENST00000550890.5
CDS-3UTR CCA 90 bp GTTGAGGGCTCCAAAAATATACTCCTCAGGGCTCAGCGAGTGGCGTCGGTTACCGAGGGGCGCATTCTCTaGAGGACGGTGGGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: VEGSKNILLRAQRVASVTEGRIL*RTVGQG
Trigger: TCCCTGCCCCACCGTCCTCCAGAGAATGCGCCCCTC...GGTAACCGACGCCACTCGCTGAGCCCTGAGGAGTATATTTTTGGAGCCCTCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000550195.5
CDS-3UTR CCA 90 bp GGTTGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGCAGATGGGGCTGGCCTaGCAGCTACAGCGATTGCCT +
Preference number: 4 (lower is better)
Translates to: GWQLVLYLVSQERRGGTGQMGLA*QLQRLP
Trigger: AGGCAATCGCTGTAGCTGCCAGGCCAGCCCCATCTG...CCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp AGCCTTGACCGTCCCAGTTTGGAAGATGTAACGGGCGAATGGGGCGGCACAGGGCCTGGCCTCATTACATaGGACCAGCTGGAGGGACTG +
Preference number: 4 (lower is better)
Translates to: SLDRPSLEDVTGEWGGTGPGLIT*DQLEGL
Trigger: CAGTCCCTCCAGCTGGTCCCATGTAATGAGGCCAGG...CCCTGTGCCGCCCCATTCGCCCGTTACATCTTCCAAACTGGGACGGTCAAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp CCCCAAATGCCTCCCAGGTGGACGCGGGTCTGGGTGGATTGGCTCCCCAGCTCCCCACCCGCCAGTTCTTaGCTCCTTTTCTCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: PQMPPRWTRVWVDWLPSSPPASS*LLFSSN
Trigger: ATTTGAAGAGAAAAGGAGCCAAGAACTGGCGGGTGG...GGAGCTGGGGAGCCAATCCACCCAGACCCGCGTCCACCTGGGAGGCATTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp GGGGCGGCACAGGGATTGACGTGGCCTCAGTTCCTCAGGGTCCCCATGGCGTATTGGAGAGAAATGTTCTaGTGCCTCTCCCGCCCTATC +
Preference number: 4 (lower is better)
Translates to: GAAQGLTWPQFLRVPMAYWREMF*CLSRPI
Trigger: GATAGGGCGGGAGAGGCACCAGAACATTTCTCTCCA...ATACGCCATGGGGACCCTGAGGAACTGAGGCCACGTCAATCCCTGTGCCGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp GGTTGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGAGCAGCCAGGACACCTaGGACTTGGCTTCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: GWQLVLYLVSQERRGGTGSSQDT*DLASGG
Trigger: CCCACCTGAAGCCAAGTCCCAGGTGTCCTGGCTGCT...CCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp TGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGAACGTGTGGCAGCTGGCCTaGGTCCCTGGAGCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: WQLVLYLVSQERRGGTGNVWQLA*VPGAVS
Trigger: AGACACAGCTCCAGGGACCCAGGCCAGCTGCCACAC...GTTCCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR CAA 72 bp AAACCCAGAGGAGCCTTCAGCCTTGACCGTCCCAGTTaGGAAGATGTAACGGGCGAATGGGGCGGCACAGGG +
Preference number: 4 (lower is better)
Translates to: KPRGAFSLDRPS*EDVTGEWGGTG
Trigger: CCCTGTGCCGCCCCATTCGCCCGTTACATCTTCCAAACTGGGACGGTCAAGGCTGAAGGCTCCTCTGGGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR TCA 90 bp CAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGAACCAGGCTGAAGACGGTGACTaGGAGGCAGACAAGGGCCGT +
Preference number: 4 (lower is better)
Translates to: QLVLYLVSQERRGGTGNQAEDGD*EADKGR
Trigger: ACGGCCCTTGTCTGCCTCTCAGTCACCGTCTTCAGC...CTGGTTCCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320634.8
ENST00000550890.5
CDS-3UTR TCA 90 bp CACAGTAACTTTCCACTGGCCTGGAGTTGGCCACTGCACATGCTGGCTGCACGCTGGCGGGTGGAGAAGTaGGTGAGAGGATGTGGGTCT +
Preference number: 4 (lower is better)
Translates to: HSNFPLAWSWPLHMLAARWRVEK*VRGCGS
Trigger: AGACCCACATCCTCTCACTCACTTCTCCACCCGCCA...GCGTGCAGCCAGCATGTGCAGTGGCCAACTCCAGGCCAGTGGAAAGTTACTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR TCA 90 bp CACAGTAACTTTCCACTGGCCTGGAGTTGGCCACTGCACATGCTGGCTGCACGCGGACTGTGCCAACTATaGAGACCTCAGGAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: HSNFPLAWSWPLHMLAARGLCQL*RPQEAW
Trigger: CCAGGCCTCCTGAGGTCTTCATAGTTGGCACAGTCC...GCGTGCAGCCAGCATGTGCAGTGGCCAACTCCAGGCCAGTGGAAAGTTACTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR TCA 90 bp AAGCTGATAAGGAGCCCTGGCCTCATTACATGGGACCAGCTGGAGGGACTGGCCGGACTCTGGGCTGAGTaGGTGGCCAGTGAAGCTAGA +
Preference number: 4 (lower is better)
Translates to: KLIRSPGLITWDQLEGLAGLWAE*VASEAR
Trigger: TCTAGCTTCACTGGCCACTCACTCAGCCCAGAGTCC...GGCCAGTCCCTCCAGCTGGTCCCATGTAATGAGGCCAGGGCTCCTTATCAGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR TCA 90 bp CTTCCAGAAGAGGACTTCAGTGGGAGACCCCTCAACTCACATTCCGGACAGTCACAGGACATCAGGGCCTaGCCACCCACCTCTCTGCGC +
Preference number: 4 (lower is better)
Translates to: LPEEDFSGRPLNSHSGQSQDIRA*PPTSLR
Trigger: GCGCAGAGAGGTGGGTGGTCAGGCCCTGATGTCCTG...TGACTGTCCGGAATGTGAGTTGAGGGGTCTCCCACTGAAGTCCTCTTCTGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR TCA 90 bp CCCCCAGAACATCCAGCCGGAGGGCCCAATCACACCTCACTCAGCCTTAGGCCTGCTGTGATGCGTGTGTaGCACTGTTTATTGCCGAGG +
Preference number: 4 (lower is better)
Translates to: PPEHPAGGPNHTSLSLRPAVMRV*HCLLPR
Trigger: CCTCGGCAATAAACAGTGTCACACACGCATCACAGC...AGGCCTAAGGCTGAGTGAGGTGTGATTGGGCCCTCCGGCTGGATGTTCTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR TCA 90 bp CCCAGTTTGGAAGATGTAACGGGCGAATGGGGCGGCACAGGGATTGACGTGGCCTGCCCTTCCTACTTCTaGCGCCTCTCCTGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: PSLEDVTGEWGGTGIDVACPSYF*RLSWCF
Trigger: GAAACACCAGGAGAGGCGTCAGAAGTAGGAAGGGCA...GGCCACGTCAATCCCTGTGCCGCCCCATTCGCCCGTTACATCTTCCAAACTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR TCA 90 bp TGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGAACAGGTGTGCCCGGGAATaGGTCCCAGACTCGTGTGTG +
Preference number: 4 (lower is better)
Translates to: WQLVLYLVSQERRGGTGNRCARE*VPDSCV
Trigger: CACACACGAGTCTGGGACTCATTCCCGGGCACACCT...GTTCCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR TCA 90 bp AAGCTGATAAGGAGCCCTGGCCTCATTACATGGGACCAGCTGGAGGGACTGGCCGTGTCTGTCCCATCCTaGCTCCCTCGGAAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: KLIRSPGLITWDQLEGLAVSVPS*LPRKEE
Trigger: CTCTTCCTTCCGAGGGAGTCAGGATGGGACAGACAC...GGCCAGTCCCTCCAGCTGGTCCCATGTAATGAGGCCAGGGCTCCTTATCAGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR GCA 90 bp AGGGCTCCAAAAATATACTCCTCAGGGCTCAGCGAGTGGCGTCGGTTACCCATCTTCCCTGGGTCATGGTaGCGTCTCTCGGGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: RAPKIYSSGLSEWRRLPIFPGSW*RLSGKG
Trigger: CCCCTTCCCCGAGAGACGGCACCATGACCCAGGGAA...GATGGGTAACCGACGCCACTCGCTGAGCCCTGAGGAGTATATTTTTGGAGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550195.5
CDS-3UTR GCA 90 bp GGGGCAGGGAGGGCTCCTCATTCTCGGTTAGTGCCAAAAAGCTGCAGGAAGAAGCATAGCTGGAGCTGCTaGTGGGGTCCACATAGGCCC +
Preference number: 4 (lower is better)
Translates to: GAGRAPHSRLVPKSCRKKHSWSC*WGPHRP
Trigger: GGGCCTATGTGGACCCCAGCAGCAGCTCCAGCTATG...CTTCTTCCTGCAGCTTTTTGGCACTAACCGAGAATGAGGAGCCCTCCCTGCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000550195.5
CDS-3UTR GCA 90 bp GGGTTGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGAGCCCTAGGAGGAATTaGAGTGGGGCTCAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: GLAASFISGLAGAQGRDRSPRRN*SGAQGS
Trigger: AGAGCCCTGAGCCCCACTGCAATTCCTCCTAGGGCT...CCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR GCA 90 bp CACAGTAACTTTCCACTGGCCTGGAGTTGGCCACTGCACATGCTGGCTGCACGCTGTGGGTCTCGGTCCTaGAACCCCAAATGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: HSNFPLAWSWPLHMLAARCGSRS*NPKCLP
Trigger: TGGGAGGCATTTGGGGTTGCAGGACCGAGACCCACA...GCGTGCAGCCAGCATGTGCAGTGGCCAACTCCAGGCCAGTGGAAAGTTACTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR GCA 90 bp TTGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGAACTCAGATGTGTCCCCTaGCCCCCACCCGTGGACATG +
Preference number: 4 (lower is better)
Translates to: LAASFISGLAGAQGRDRELRCVP*PPPVDM
Trigger: CATGTCCACGGGTGGGGGGCAGGGGACACATCTGAG...TTCCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000550890.5
CDS-3UTR CCA 90 bp GCGAGTGGCGTCGGTTACCCATCAGCAACTGGGTGTCAAGTGCCAGGAACAATGGCTTTCCCTGGGTCATaGTGCCGTCTCTCGGGGAAG +
Preference number: 4 (lower is better)
Translates to: ASGVGYPSATGCQVPGTMAFPGS*CRLSGK
Trigger: CTTCCCCGAGAGACGGCACCATGACCCAGGGAAAGC...CATTGTTCCTGGCACTTGACACCCAGTTGCTGATGGGTAACCGACGCCACTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550195.5
CDS-3UTR CCA 90 bp CACAGTAACTTTCCACTGGCCTGGAGTTGGCCACTGCACATGCTGGCTGCACGCACGGAGAGCTTTCCCTaGGTCATGGTGCCGTCTCTC +
Preference number: 4 (lower is better)
Translates to: HSNFPLAWSWPLHMLAARTESFP*VMVPSL
Trigger: GAGAGACGGCACCATGACCCAGGGAAAGCTCTCCGT...GCGTGCAGCCAGCATGTGCAGTGGCCAACTCCAGGCCAGTGGAAAGTTACTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp CAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGAACCAGTCCCCTCCCCAGAGGTaGCTTCCTCATAGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: QLVLYLVSQERRGGTGNQSPPQR*LPHRRV
Trigger: CACCCTCCTATGAGGAAGCCACCTCTGGGGAGGGGA...CTGGTTCCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000320634.8
ENST00000550890.5
CDS-3UTR CCA 90 bp TTGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGAAAGCTGGAGCTGCTGCTaGGGTCCACATAGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: LAASFISGLAGAQGRDRESWSCC*GPHRPS
Trigger: GCTGGGCCTATGTGGACCCCAGCAGCAGCTCCAGCT...TTCCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320634.8
ENST00000550890.5
CDS-3UTR CCA 90 bp GGGTTGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGTGGTGAAGAGCTCATaGTCTCCGGTGGGGAAACCG +
Preference number: 4 (lower is better)
Translates to: GLAASFISGLAGAQGRDRVVKSS*SPVGKP
Trigger: CGGTTTCCCCACCGGAGACCATGAGCTCTTCACCAC...CCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320634.8
ENST00000550890.5
CDS-3UTR CCA 90 bp GGGGCGGCACAGGGATTGACGTGGCCTCAGTTCCTCAGGGTCCCCATGGCGTATTTACCCATCAGCAACTaGGTGTCAAGTGCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: GAAQGLTWPQFLRVPMAYLPISN*VSSARN
Trigger: GTTCCTGGCACTTGACACCCAGTTGCTGATGGGTAA...ATACGCCATGGGGACCCTGAGGAACTGAGGCCACGTCAATCCCTGTGCCGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp GGCTCCAAAAATATACTCCTCAGGGCTCAGCGAGTGGCGTCGGTTACCCATCAGTTCTCTGGAGGACGGTaGGGCAGGGAGGGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: GSKNILLRAQRVASVTHQFSGGR*GREGSS
Trigger: TGAGGAGCCCTCCCTGCCCCACCGTCCTCCAGAGAA...CTGATGGGTAACCGACGCCACTCGCTGAGCCCTGAGGAGTATATTTTTGGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550195.5
CDS-3UTR CCA 90 bp TGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGAACCTCTGCCGGGCTTCCTaGGTCTCTCTCCTGCATCTG +
Preference number: 4 (lower is better)
Translates to: WQLVLYLVSQERRGGTGNLCRAS*VSLLHL
Trigger: CAGATGCAGGAGAGAGACCCAGGAAGCCCGGCAGAG...GTTCCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp TGCAGCCCTAGGAGGAATTGCAGTGGGGCTCAGGGCTCTGCCGGGCTTCCTGGGGCTGTTAGCATCAGCTaGATGGCTTCCAAATTGGAG +
Preference number: 4 (lower is better)
Translates to: CSPRRNCSGAQGSAGLPGAVSIS*MASKLE
Trigger: CTCCAATTTGGAAGCCATCCAGCTGATGCTAACAGC...CCCAGGAAGCCCGGCAGAGCCCTGAGCCCCACTGCAATTCCTCCTAGGGCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp GGGTTGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGTGGAGGGACTGGCCCTaGCTGTTAGCATCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: GLAASFISGLAGAQGRDRWRDWP*LLASAG
Trigger: TCCAGCTGATGCTAACAGCCAGGGCCAGTCCCTCCA...CCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp AGACTCCCTTCCTCCTTTACAGCTTGTGACACCTGCTCAGCTGCGGTTTCCTTACGCCCCTCTGGGGGTTaGAGGGCTGACGCACACCCT +
Preference number: 4 (lower is better)
Translates to: RLPSSFTACDTCSAAVSLRPSGG*RADAHP
Trigger: AGGGTGTGCGTCAGCCCTCCAACCCCCAGAGGGGCG...TAAGGAAACCGCAGCTGAGCAGGTGTCACAAGCTGTAAAGGAGGAAGGGAGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp GATGGGGCTGGGAAGGAACAGCACACCTCGTCTCCCTTCCCAAGGCAGACGGAGAACTTTCCACTGGCCTaGAGTTGGCCACTGCACATG +
Preference number: 4 (lower is better)
Translates to: DGAGKEQHTSSPFPRQTENFPLA*SWPLHM
Trigger: CATGTGCAGTGGCCAACTCCAGGCCAGTGGAAAGTT...CTCCGTCTGCCTTGGGAAGGGAGACGAGGTGTGCTGTTCCTTCCCAGCCCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp CAGCACACCTCGTCTCCCTTCCCAAGGCAGACGGAGCTCCCAGCACAGGGGAGAAGAAGAGGACTTCAGTaGGAGACCCCTCAACTCACA +
Preference number: 4 (lower is better)
Translates to: QHTSSPFPRQTELPAQGRRRGLQ*ETPQLT
Trigger: TGTGAGTTGAGGGGTCTCCCACTGAAGTCCTCTTCT...TCTCCCCTGTGCTGGGAGCTCCGTCTGCCTTGGGAAGGGAGACGAGGTGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp GGTTGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGGAAGGGCCTTCAGGGTaGAGGAAGGGCAAGAGGATC +
Preference number: 4 (lower is better)
Translates to: GWQLVLYLVSQERRGGTGEGPSG*RKGKRI
Trigger: GATCCTCTTGCCCTTCCTCCACCCTGAAGGCCCTTC...CCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550890.5
CDS-3UTR TCA 90 bp CATCAGCAACTGGGTGTCAAGTGCCAGGAACAATGTAAATACACCCGCTCCCAGATAGGAGGGTGGGGCTaGGGGCACTGCTGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: HQQLGVKCQEQCKYTRSQIGGWG*GHCWSL
Trigger: GAGGCTCCAGCAGTGCCCTCAGCCCCACCCTCCTAT...CTGGGAGCGGGTGTATTTACATTGTTCCTGGCACTTGACACCCAGTTGCTGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550195.5
CDS-3UTR TCA 90 bp AAGCTGATAAGGAGCCCTGGCCTCATTACATGGGACCAGCTGGAGGGACTGGCCAAAAGAGCTCTGTCATaGCCCGGGAGGGCCATTCAC +
Preference number: 4 (lower is better)
Translates to: KLIRSPGLITWDQLEGLAKRALS*PGRAIH
Trigger: GTGAATGGCCCTCCCGGGTCATGACAGAGCTCTTTT...GGCCAGTCCCTCCAGCTGGTCCCATGTAATGAGGCCAGGGCTCCTTATCAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR TCA 90 bp GGTTGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGCTGGGAAGGCCTGAATaGGGCAGCCAGAGAAGGAAA +
Preference number: 4 (lower is better)
Translates to: GWQLVLYLVSQERRGGTGLGRPE*GSQRRK
Trigger: TTTCCTTCTCTGGCTGCCTCATTCAGGCCTTCCCAG...CCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550890.5
CDS-3UTR TCA 90 bp CAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGAACCAGAACAGACTCACAGAGTaGCCCAGTGGAAGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: QLVLYLVSQERRGGTGNQNRLTE*PSGRGL
Trigger: GAGGCCCCTTCCACTGGGTCACTCTGTGAGTCTGTT...CTGGTTCCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550890.5
CDS-3UTR GCA 90 bp CGTCGGTTACCCATCAGCAACTGGGTGTCAAGTGCCAGGAACAATGTAAATACACCATGCACCTGCTGCTaGCCCTCGGTCCCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: RRLPISNWVSSARNNVNTPCTCC*PSVPGA
Trigger: GGCCCCTGGGACCGAGGGGCAGCAGCAGGTGCATGG...TGTATTTACATTGTTCCTGGCACTTGACACCCAGTTGCTGATGGGTAACCGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550195.5
CDS-3UTR GCA 90 bp GTTGAGGGCTCCAAAAATATACTCCTCAGGGCTCAGCGAGTGGCGTCGGTTACCTCCTTCTTCTCGCCATaGACCTGCTGCTGCCCCTCG +
Preference number: 4 (lower is better)
Translates to: VEGSKNILLRAQRVASVTSFFSP*TCCCPS
Trigger: CGAGGGGCAGCAGCAGGTGCATGGCGAGAAGAAGGA...GGTAACCGACGCCACTCGCTGAGCCCTGAGGAGTATATTTTTGGAGCCCTCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550195.5
CDS-3UTR GCA 90 bp TTGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGAACATAGCTGGAGCTGCTaGTGGGGTCCACATAGGCCC +
Preference number: 4 (lower is better)
Translates to: LAASFISGLAGAQGRDREHSWSC*WGPHRP
Trigger: GGGCCTATGTGGACCCCAGCAGCAGCTCCAGCTATG...TTCCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320634.8
ENST00000550890.5
CDS-3UTR GCA 90 bp GATGGGGCTGGGAAGGAACAGCACACCTCGTCTCCCTTCCCAAGGCAGACGGAGCAGTGCTGCATAAACTaGATGGAGCCAGGGCACATA +
Preference number: 4 (lower is better)
Translates to: DGAGKEQHTSSPFPRQTEQCCIN*MEPGHI
Trigger: TATGTGCCCTGGCTCCATGCAGTTTATGCAGCACTG...CTCCGTCTGCCTTGGGAAGGGAGACGAGGTGTGCTGTTCCTTCCCAGCCCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR GCA 90 bp GGGTTGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGACCCGCTCCCAGTGCTaGATAAACTGCATGGAGCCA +
Preference number: 4 (lower is better)
Translates to: GLAASFISGLAGAQGRDRTRSQC*INCMEP
Trigger: TGGCTCCATGCAGTTTATGCAGCACTGGGAGCGGGT...CCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320634.8
ENST00000550890.5
CDS-3UTR GCA 90 bp GGTTGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGACCCGCTCCCAGTGCTaGATAAACTGCATGGAGCCA +
Preference number: 4 (lower is better)
Translates to: GWQLVLYLVSQERRGGTGTRSQC*INCMEP
Trigger: TGGCTCCATGCAGTTTATGCAGCACTGGGAGCGGGT...CCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320634.8
ENST00000550890.5
CDS-3UTR CCA 90 bp AAGTGCCAGGAACAATGTAAATACACCCGCTCCCAGTGCTGCATAAACTGCATGGCCCGGGTGGCCGCTTaGGTAACCGCAGCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: KCQEQCKYTRSQCCINCMARVAA*VTAACL
Trigger: CAGGCAGGCTGCGGTTACCCAAGCGGCCACCCGGGC...CATGCAGTTTATGCAGCACTGGGAGCGGGTGTATTTACATTGTTCCTGGCACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550195.5
CDS-3UTR CCA 90 bp TGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGAACGTGGTGAAGAGCTCATaGTCTCCGGTGGGGAAACCG +
Preference number: 4 (lower is better)
Translates to: WQLVLYLVSQERRGGTGNVVKSS*SPVGKP
Trigger: CGGTTTCCCCACCGGAGACCATGAGCTCTTCACCAC...GTTCCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320634.8
ENST00000550890.5
CDS-3UTR CCA 90 bp TCAGCGAGTGGCGTCGGTTACCCATCAGCAACTGGGTGTCAAGTGCCAGGAACAGTGGTGAAGAGCTCATaGTCTCCGGTGGGGAAACCG +
Preference number: 4 (lower is better)
Translates to: SASGVGYPSATGCQVPGTVVKSS*SPVGKP
Trigger: CGGTTTCCCCACCGGAGACCATGAGCTCTTCACCAC...TGTTCCTGGCACTTGACACCCAGTTGCTGATGGGTAACCGACGCCACTCGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550195.5
CDS-3UTR CCA 90 bp GGGGCAGGGAGGGCTCCTCATTCTCGGTTAGTGCCAAAAAGCTGCAGGAAGAAGTGCCCAGTACCAGCCTaGGTTGGCCTGGACATAGTC +
Preference number: 4 (lower is better)
Translates to: GAGRAPHSRLVPKSCRKKCPVPA*VGLDIV
Trigger: GACTATGTCCAGGCCAACCCAGGCTGGTACTGGGCA...CTTCTTCCTGCAGCTTTTTGGCACTAACCGAGAATGAGGAGCCCTCCCTGCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550195.5
CDS-3UTR CCA 90 bp TGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGAACTGCCCAGTACCAGCCTaGGTTGGCCTGGACATAGTC +
Preference number: 4 (lower is better)
Translates to: WQLVLYLVSQERRGGTGNCPVPA*VGLDIV
Trigger: GACTATGTCCAGGCCAACCCAGGCTGGTACTGGGCA...GTTCCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320634.8
ENST00000550890.5
CDS-3UTR CCA 90 bp GGGTTGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGAGGGGAAATGCCTCCTaGGTCCAGAACAGCAAGCCA +
Preference number: 4 (lower is better)
Translates to: GLAASFISGLAGAQGRDRRGNAS*VQNSKP
Trigger: TGGCTTGCTGTTCTGGACCCAGGAGGCATTTCCCCT...CCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320634.8
ENST00000550890.5
CDS-3UTR CCA 90 bp AGACTCCCTTCCTCCTTTACAGCTTGTGACACCTGCTCAGCTGCGGTTTCCTTAGAGGGGCGCATTCTCTaGAGGACGGTGGGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: RLPSSFTACDTCSAAVSLEGRIL*RTVGQG
Trigger: TCCCTGCCCCACCGTCCTCCAGAGAATGCGCCCCTC...TAAGGAAACCGCAGCTGAGCAGGTGTCACAAGCTGTAAAGGAGGAAGGGAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp GATGGGGCTGGGAAGGAACAGCACACCTCGTCTCCCTTCCCAAGGCAGACGGAGGGCCACAGGCTGGGTTaGCAGCTAGTTTTATATCTG +
Preference number: 4 (lower is better)
Translates to: DGAGKEQHTSSPFPRQTEGHRLG*QLVLYL
Trigger: CAGATATAAAACTAGCTGCCAACCCAGCCTGTGGCC...CTCCGTCTGCCTTGGGAAGGGAGACGAGGTGTGCTGTTCCTTCCCAGCCCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp CAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGAACCAGTCCTCAGGGTCCCCATaGCGTATGTACAAGCGGCAG +
Preference number: 4 (lower is better)
Translates to: QLVLYLVSQERRGGTGNQSSGSP*RMYKRQ
Trigger: CTGCCGCTTGTACATACGCCATGGGGACCCTGAGGA...CTGGTTCCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp CAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGAACCAGGCACAGGGATTGACGTaGCCTCAGTTCCTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: QLVLYLVSQERRGGTGNQAQGLT*PQFLRV
Trigger: GACCCTGAGGAACTGAGGCCACGTCAATCCCTGTGC...CTGGTTCCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp AGACCCTCTCCTATTGCCCTTGGCCTCCAGGTCCAAATCCCTAGAACAAGCCGCGATGTAACGGGCGAATaGGGCGGCACAGGGATTGAC +
Preference number: 4 (lower is better)
Translates to: RPSPIALGLQVQIPRTSRDVTGE*GGTGID
Trigger: GTCAATCCCTGTGCCGCCCCATTCGCCCGTTACATC...GCGGCTTGTTCTAGGGATTTGGACCTGGAGGCCAAGGGCAATAGGAGAGGGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp CCCAGTTTGGAAGATGTAACGGGCGAATGGGGCGGCACAGGGATTGACGTGGCCAGAGCCAAGAGAAGATaGGCAGACTGGGACAGCCAT +
Preference number: 4 (lower is better)
Translates to: PSLEDVTGEWGGTGIDVARAKRR*ADWDSH
Trigger: ATGGCTGTCCCAGTCTGCCCATCTTCTCTTGGCTCT...GGCCACGTCAATCCCTGTGCCGCCCCATTCGCCCGTTACATCTTCCAAACTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp CACAGTAACTTTCCACTGGCCTGGAGTTGGCCACTGCACATGCTGGCTGCACGCCCTAGAACAAGCCGCTaGTCCCAGAGCCAAGAGAAG +
Preference number: 4 (lower is better)
Translates to: HSNFPLAWSWPLHMLAARPRTSR*SQSQEK
Trigger: CTTCTCTTGGCTCTGGGACCAGCGGCTTGTTCTAGG...GCGTGCAGCCAGCATGTGCAGTGGCCAACTCCAGGCCAGTGGAAAGTTACTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp GGTTGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGGGGGCAGGGTCTCTATaGTTCCAGAAAAGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: GWQLVLYLVSQERRGGTGGAGSL*FQKRAW
Trigger: CCAGGCTCTTTTCTGGAACCATAGAGACCCTGCCCC...CCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCAACC
58% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000550890.5
CDS-3UTR CCA 90 bp GGTTGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGAGCTGGGGCACATGGTaGAGCTGGGATAGGAACAGA +
Preference number: 4 (lower is better)
Translates to: GWQLVLYLVSQERRGGTGSWGTW*SWDRNR
Trigger: TCTGTTCCTATCCCAGCTCCACCATGTGCCCCAGCT...CCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550890.5
CDS-3UTR CCA 90 bp TGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGAACGCTAGCTGGGGCACATaGTGGAGCTGGGATAGGAAC +
Preference number: 4 (lower is better)
Translates to: WQLVLYLVSQERRGGTGNASWGT*WSWDRN
Trigger: GTTCCTATCCCAGCTCCACCATGTGCCCCAGCTAGC...GTTCCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550890.5
CDS-3UTR TCA 90 bp CAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGAACCAGAGGAGCCTTCAGCCTTaGCCGTCCCAGTTTGGAAGA +
Preference number: 4 (lower is better)
Translates to: QLVLYLVSQERRGGTGNQRSLQP*PSQFGR
Trigger: TCTTCCAAACTGGGACGGTCAAGGCTGAAGGCTCCT...CTGGTTCCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR TCA 90 bp CACAGTAACTTTCCACTGGCCTGGAGTTGGCCACTGCACATGCTGGCTGCACGCATTACCGAGCCTTTCTaGGCACCTCGGCTTTTCCCT +
Preference number: 4 (lower is better)
Translates to: HSNFPLAWSWPLHMLAARITEPF*APRLFP
Trigger: AGGGAAAAGCCGAGGTGCTCAGAAAGGCTCGGTAAT...GCGTGCAGCCAGCATGTGCAGTGGCCAACTCCAGGCCAGTGGAAAGTTACTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR GCA 90 bp GGTTGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGGAACACAGCATAGGATaGCCAGTACCAGCCTGGGTT +
Preference number: 4 (lower is better)
Translates to: GWQLVLYLVSQERRGGTGEHSIG*PVPAWV
Trigger: AACCCAGGCTGGTACTGGGCATCCTATGCTGTGTTC...CCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320634.8
ENST00000550890.5
CDS-3UTR GCA 90 bp TGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGAACAGGTTCCAGGGGAAATaGCTCCTGGGTCCAGAACAG +
Preference number: 4 (lower is better)
Translates to: WQLVLYLVSQERRGGTGNRFQGK*LLGPEQ
Trigger: CTGTTCTGGACCCAGGAGGCATTTCCCCTGGAACCT...GTTCCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320634.8
ENST00000550890.5
CDS-3UTR GCA 90 bp GGGGCAGGGAGGGCTCCTCATTCTCGGTTAGTGCCAAAAAGCTGCAGGAAGAAGACCCGCTCCCAGTGCTaGATAAACTGCATGGAGCCA +
Preference number: 4 (lower is better)
Translates to: GAGRAPHSRLVPKSCRKKTRSQC*INCMEP
Trigger: TGGCTCCATGCAGTTTATGCAGCACTGGGAGCGGGT...CTTCTTCCTGCAGCTTTTTGGCACTAACCGAGAATGAGGAGCCCTCCCTGCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550195.5
CDS-3UTR GCA 90 bp AGACTCCCTTCCTCCTTTACAGCTTGTGACACCTGCTCAGCTGCGGTTTCCTTAGTTGGCCACTGCACATaGTGGCTGCACGCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: RLPSSFTACDTCSAAVSLVGHCT*WLHAPP
Trigger: TGGGGGAGCGTGCAGCCAGCATGTGCAGTGGCCAAC...TAAGGAAACCGCAGCTGAGCAGGTGTCACAAGCTGTAAAGGAGGAAGGGAGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR GCA 90 bp TTGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGAACCAAGGTCACAGAGCTaGATGTGGCCCACTGAGAGG +
Preference number: 4 (lower is better)
Translates to: LAASFISGLAGAQGRDREPRSQS*MWPTER
Trigger: CCTCTCAGTGGGCCACATGCAGCTCTGTGACCTTGG...TTCCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550890.5
CDS-3UTR CCA 90 bp GGGGCAGGGAGGGCTCCTCATTCTCGGTTAGTGCCAAAAAGCTGCAGGAAGAAGGCTCATGGTCTCCGGTaGGGAAACCGTTGTCATAGC +
Preference number: 4 (lower is better)
Translates to: GAGRAPHSRLVPKSCRKKAHGLR*GNRCHS
Trigger: GCTATGACAACGGTTTCCCCACCGGAGACCATGAGC...CTTCTTCCTGCAGCTTTTTGGCACTAACCGAGAATGAGGAGCCCTCCCTGCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550195.5
CDS-3UTR CCA 90 bp TGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGAACGCTCATGGTCTCCGGTaGGGAAACCGTTGTCATAGC +
Preference number: 4 (lower is better)
Translates to: WQLVLYLVSQERRGGTGNAHGLR*GNRCHS
Trigger: GCTATGACAACGGTTTCCCCACCGGAGACCATGAGC...GTTCCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320634.8
ENST00000550890.5
CDS-3UTR CCA 90 bp CTTCCAGAAGAGGACTTCAGTGGGAGACCCCTCAACTCACATTCCGGACAGTCATCAGGGCTCAGCGAGTaGCGTCGGTTACCCATCAGC +
Preference number: 4 (lower is better)
Translates to: LPEEDFSGRPLNSHSGQSSGLSE*RRLPIS
Trigger: GCTGATGGGTAACCGACGCCACTCGCTGAGCCCTGA...TGACTGTCCGGAATGTGAGTTGAGGGGTCTCCCACTGAAGTCCTCTTCTGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp AAAATATACTCCTCAGGGCTCAGCGAGTGGCGTCGGTTACCCATCAGCAACTGGTCAGGGCTCAGCGAGTaGCGTCGGTTACCCATCAGC +
Preference number: 4 (lower is better)
Translates to: KIYSSGLSEWRRLPISNWSGLSE*RRLPIS
Trigger: GCTGATGGGTAACCGACGCCACTCGCTGAGCCCTGA...CCAGTTGCTGATGGGTAACCGACGCCACTCGCTGAGCCCTGAGGAGTATATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550195.5
CDS-3UTR CCA 90 bp AGGGAACAGGTGCGGACACTGGGGAACTTGCAGGAGCTAAGGCCAGTGGACAGCGGATTCCTCACTGCCTaGATTGGAGATGGAACGCAT +
Preference number: 4 (lower is better)
Translates to: REQVRTLGNLQELRPVDSGFLTA*IGDGTH
Trigger: ATGCGTTCCATCTCCAATCCAGGCAGTGAGGAATCC...GCTGTCCACTGGCCTTAGCTCCTGCAAGTTCCCCAGTGTCCGCACCTGTTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp CAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGAACCAGCACAGAGTGACCCAGTaGAAGGGGCCTCAGAAGACA +
Preference number: 4 (lower is better)
Translates to: QLVLYLVSQERRGGTGNQHRVTQ*KGPQKT
Trigger: TGTCTTCTGAGGCCCCTTCCACTGGGTCACTCTGTG...CTGGTTCCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550890.5
CDS-3UTR CCA 90 bp TTGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGAACACTGTCATTGTCCCTaGGGTAGGGGCAGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: LAASFISGLAGAQGRDREHCHCP*GRGRVS
Trigger: AGAGACCCTGCCCCTACCCCAGGGACAATGACAGTG...TTCCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550890.5
CDS-3UTR TCA 90 bp CAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGAACCAGGATACCCTGTTTGCTTaGGGCAGCTGTGGGTCTGAA +
Preference number: 4 (lower is better)
Translates to: QLVLYLVSQERRGGTGNQDTLFA*GSCGSE
Trigger: TTCAGACCCACAGCTGCCTCAAGCAAACAGGGTATC...CTGGTTCCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR TCA 90 bp AGACTCCCTTCCTCCTTTACAGCTTGTGACACCTGCTCAGCTGCGGTTTCCTTAATGAGGAGAGGAAACTaGGGGGCCCGGAGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: RLPSSFTACDTCSAAVSLMRRGN*GARRRG
Trigger: TCCTCTCCTCCGGGCCCCTCAGTTTCCTCTCCTCAT...TAAGGAAACCGCAGCTGAGCAGGTGTCACAAGCTGTAAAGGAGGAAGGGAGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR GCA 90 bp AGACTCCCTTCCTCCTTTACAGCTTGTGACACCTGCTCAGCTGCGGTTTCCTTACATAGCTGGAGCTGCTaGTGGGGTCCACATAGGCCC +
Preference number: 4 (lower is better)
Translates to: RLPSSFTACDTCSAAVSLHSWSC*WGPHRP
Trigger: GGGCCTATGTGGACCCCAGCAGCAGCTCCAGCTATG...TAAGGAAACCGCAGCTGAGCAGGTGTCACAAGCTGTAAAGGAGGAAGGGAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR GCA 90 bp AGACCCTCTCCTATTGCCCTTGGCCTCCAGGTCCAAATCCCTAGAACAAGCCGCGAACACAGCATAGGATaGCCAGTACCAGCCTGGGTT +
Preference number: 4 (lower is better)
Translates to: RPSPIALGLQVQIPRTSREHSIG*PVPAWV
Trigger: AACCCAGGCTGGTACTGGGCATCCTATGCTGTGTTC...GCGGCTTGTTCTAGGGATTTGGACCTGGAGGCCAAGGGCAATAGGAGAGGGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR GCA 90 bp TCAGCGAGTGGCGTCGGTTACCCATCAGCAACTGGGTGTCAAGTGCCAGGAACAGAACACAGCATAGGATaGCCAGTACCAGCCTGGGTT +
Preference number: 4 (lower is better)
Translates to: SASGVGYPSATGCQVPGTEHSIG*PVPAWV
Trigger: AACCCAGGCTGGTACTGGGCATCCTATGCTGTGTTC...TGTTCCTGGCACTTGACACCCAGTTGCTGATGGGTAACCGACGCCACTCGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550195.5
CDS-3UTR GCA 90 bp TCTGGAGGACGGTGGGGCAGGGAGGGCTCCTCATTCTCGGTTAGTGCCAAAAAGCAGTGCTGCATAAACTaGATGGAGCCAGGGCACATA +
Preference number: 4 (lower is better)
Translates to: SGGRWGREGSSFSVSAKKQCCIN*MEPGHI
Trigger: TATGTGCCCTGGCTCCATGCAGTTTATGCAGCACTG...CTTTTTGGCACTAACCGAGAATGAGGAGCCCTCCCTGCCCCACCGTCCTCCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550195.5
CDS-3UTR GCA 90 bp AGACCCTCTCCTATTGCCCTTGGCCTCCAGGTCCAAATCCCTAGAACAAGCCGCTACACCCGCTCCCAGTaGTGCATAAACTGCATGGAG +
Preference number: 4 (lower is better)
Translates to: RPSPIALGLQVQIPRTSRYTRSQ*CINCME
Trigger: CTCCATGCAGTTTATGCAGCACTGGGAGCGGGTGTA...GCGGCTTGTTCTAGGGATTTGGACCTGGAGGCCAAGGGCAATAGGAGAGGGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR GCA 90 bp TGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGAACTACACCCGCTCCCAGTaGTGCATAAACTGCATGGAG +
Preference number: 4 (lower is better)
Translates to: WQLVLYLVSQERRGGTGNYTRSQ*CINCME
Trigger: CTCCATGCAGTTTATGCAGCACTGGGAGCGGGTGTA...GTTCCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320634.8
ENST00000550890.5
CDS-3UTR GCA 90 bp AGGGAACAGGTGCGGACACTGGGGAACTTGCAGGAGCTAAGGCCAGTGGACAGCAGAAACCAGAAATCTTaGCTCCCAGCTCTTGTCTGG +
Preference number: 4 (lower is better)
Translates to: REQVRTLGNLQELRPVDSRNQKS*LPALVW
Trigger: CCAGACAAGAGCTGGGAGGCAAGATTTCTGGTTTCT...GCTGTCCACTGGCCTTAGCTCCTGCAAGTTCCCCAGTGTCCGCACCTGTTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR GCA 90 bp TGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGAACAGAGAAATGTTCTGGTaGCTCTCCCGCCCTATCCTG +
Preference number: 4 (lower is better)
Translates to: WQLVLYLVSQERRGGTGNREMFW*LSRPIL
Trigger: CAGGATAGGGCGGGAGAGGCACCAGAACATTTCTCT...GTTCCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR GCA 90 bp CTTCCAGAAGAGGACTTCAGTGGGAGACCCCTCAACTCACATTCCGGACAGTCATCCCAAACCAGGCCCTaGGTTTCCTCAAGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: LPEEDFSGRPLNSHSGQSSQTRP*VSSSSH
Trigger: GTGGCTGCTTGAGGAAACGCAGGGCCTGGTTTGGGA...TGACTGTCCGGAATGTGAGTTGAGGGGTCTCCCACTGAAGTCCTCTTCTGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp CATCAGCAACTGGGTGTCAAGTGCCAGGAACAATGTAAATACACCCGCTCCCAGTCCCCTCCCCAGAGGTaGCTTCCTCATAGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: HQQLGVKCQEQCKYTRSQSPPQR*LPHRRV
Trigger: CACCCTCCTATGAGGAAGCCACCTCTGGGGAGGGGA...CTGGGAGCGGGTGTATTTACATTGTTCCTGGCACTTGACACCCAGTTGCTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550195.5
CDS-3UTR CCA 90 bp AGGGAACAGGTGCGGACACTGGGGAACTTGCAGGAGCTAAGGCCAGTGGACAGCAAGTCGAACTTGGTCTaGAAGCTGAAGACGGTGACT +
Preference number: 4 (lower is better)
Translates to: REQVRTLGNLQELRPVDSKSNLV*KLKTVT
Trigger: AGTCACCGTCTTCAGCTTCCAGACCAAGTTCGACTT...GCTGTCCACTGGCCTTAGCTCCTGCAAGTTCCCCAGTGTCCGCACCTGTTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp TTGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGAAAGCCAGGGCACATATTaGAAGGGTAGGAGGATGGCC +
Preference number: 4 (lower is better)
Translates to: LAASFISGLAGAQGRDRESQGTY*KGRRMA
Trigger: GGCCATCCTCCTACCCTTCCAATATGTGCCCTGGCT...TTCCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320634.8
ENST00000550890.5
CDS-3UTR CCA 90 bp AGACCCTCTCCTATTGCCCTTGGCCTCCAGGTCCAAATCCCTAGAACAAGCCGCACAGTAACTTTCCACTaGCCTGGAGTTGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: RPSPIALGLQVQIPRTSRTVTFH*PGVGHC
Trigger: GCAGTGGCCAACTCCAGGCCAGTGGAAAGTTACTGT...GCGGCTTGTTCTAGGGATTTGGACCTGGAGGCCAAGGGCAATAGGAGAGGGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp TGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGAACCTGGGGTGGAGGGGGTaGTGTGAAATTGAAACAGCA +
Preference number: 4 (lower is better)
Translates to: WQLVLYLVSQERRGGTGNLGWRG*CEIETA
Trigger: TGCTGTTTCAATTTCACACCACCCCCTCCACCCCAG...GTTCCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000550890.5
CDS-3UTR CCA 90 bp GGTTGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGAAGGAAAGACTGGGGTaGAGGGGGTGGTGTGAAATT +
Preference number: 4 (lower is better)
Translates to: GWQLVLYLVSQERRGGTGKERLG*RGWCEI
Trigger: AATTTCACACCACCCCCTCCACCCCAGTCTTTCCTT...CCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000550890.5
CDS-3UTR CCA 90 bp GGGTTGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGTCCCCATGGCAGGTTaGAAATGCGAGTCCATTTAC +
Preference number: 4 (lower is better)
Translates to: GLAASFISGLAGAQGRDRVPMAG*KCESIY
Trigger: GTAAATGGACTCGCATTTCCAACCTGCCATGGGGAC...CCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550890.5
CDS-3UTR CCA 90 bp GGGTTGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGAGCCACGGAGAGCTATaGAGTAGAGTCAGAGAGAGA +
Preference number: 4 (lower is better)
Translates to: GLAASFISGLAGAQGRDRSHGEL*SRVRER
Trigger: TCTCTCTCTGACTCTACTCCATAGCTCTCCGTGGCT...CCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550890.5
CDS-3UTR TCA 90 bp ACCCACCTCTCTGCGCTCTCATGTGGTCTCATTCCGGCCCCCACCCAGGCCCAGTGTCTAGGTAAATGTTaGGGGCTCCAAAAATATACT +
Preference number: 4 (lower is better)
Translates to: THLSALSCGLIPAPTQAQCLGKC*GLQKYT
Trigger: AGTATATTTTTGGAGCCCTCAACATTTACCTAGACA...CTGGGCCTGGGTGGGGGCCGGAATGAGACCACATGAGAGCGCAGAGAGGTGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR TCA 90 bp AGACCCTCTCCTATTGCCCTTGGCCTCCAGGTCCAAATCCCTAGAACAAGCCGCTCTCTCTCCTGCATCTaGAATCCTGCTAGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: RPSPIALGLQVQIPRTSRSLSCI*NPARLL
Trigger: GAGAAGCCTAGCAGGATTTCAGATGCAGGAGAGAGA...GCGGCTTGTTCTAGGGATTTGGACCTGGAGGCCAAGGGCAATAGGAGAGGGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR TCA 90 bp GGGTTGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGAGTCTCTTCCGTCACTaGACAGATGAGGAAACTGAG +
Preference number: 4 (lower is better)
Translates to: GLAASFISGLAGAQGRDRSLFRH*TDEETE
Trigger: CTCAGTTTCCTCATCTGTTCAGTGACGGAAGAGACT...CCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550890.5
CDS-3UTR TCA 90 bp CAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGAACCAGCTGTTGCGCTGGAAGTaGTGCAAGGAGAATGGAGAT +
Preference number: 4 (lower is better)
Translates to: QLVLYLVSQERRGGTGNQLLRWK*CKENGD
Trigger: ATCTCCATTCTCCTTGCATCACTTCCAGCGCAACAG...CTGGTTCCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550890.5
CDS-3UTR TCA 90 bp TGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGAACATCATCCACTGGGATTaGTCCTTCTGTTGCGCTGGA +
Preference number: 4 (lower is better)
Translates to: WQLVLYLVSQERRGGTGNIIHWD*SFCCAG
Trigger: TCCAGCGCAACAGAAGGATCAATCCCAGTGGATGAT...GTTCCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550890.5
CDS-3UTR GCA 90 bp GGTTGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGCAGGGTCAGGTAGGTTaGAAAGAACACAGCATAGGA +
Preference number: 4 (lower is better)
Translates to: GWQLVLYLVSQERRGGTGQGQVG*KEHSIG
Trigger: TCCTATGCTGTGTTCTTTGCAACCTACCTGACCCTG...CCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320634.8
ENST00000550890.5
CDS-3UTR GCA 90 bp AGGGCCATTCACAGCAAGCAGCAGACAGCACAGGCTTCAGACCCTCTCCTATTGAGGACACAGACTGGATaGAGGACAGTGTGCCCTAAG +
Preference number: 4 (lower is better)
Translates to: RAIHSKQQTAQASDPLLLRTQTG*RTVCPK
Trigger: CTTAGGGCACACTGTCCTGCATCCAGTCTGTGTCCT...CAATAGGAGAGGGTCTGAAGCCTGTGCTGTCTGCTGCTTGCTGTGAATGGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR GCA 90 bp AAGCTGATAAGGAGCCCTGGCCTCATTACATGGGACCAGCTGGAGGGACTGGCCTCCAAATTGGAGAGATaGAGAGATAAGTGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: KLIRSPGLITWDQLEGLASKLER*RDKWGS
Trigger: GCTCCCCCACTTATCTCTGCATCTCTCCAATTTGGA...GGCCAGTCCCTCCAGCTGGTCCCATGTAATGAGGCCAGGGCTCCTTATCAGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR GCA 90 bp AGACCCTCTCCTATTGCCCTTGGCCTCCAGGTCCAAATCCCTAGAACAAGCCGCACAGCTTGTGACACCTaGTCAGCTGCGGTTTCCTTA +
Preference number: 4 (lower is better)
Translates to: RPSPIALGLQVQIPRTSRTACDT*SAAVSL
Trigger: TAAGGAAACCGCAGCTGAGCAGGTGTCACAAGCTGT...GCGGCTTGTTCTAGGGATTTGGACCTGGAGGCCAAGGGCAATAGGAGAGGGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR GCA 90 bp TGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGAACGGTTCCTTCCTTACCTaGACTTGGAAGCCAGGAATG +
Preference number: 4 (lower is better)
Translates to: WQLVLYLVSQERRGGTGNGSFLT*TWKPGM
Trigger: CATTCCTGGCTTCCAAGTGCAGGTAAGGAAGGAACC...GTTCCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550890.5
CDS-3UTR CCA 90 bp GGTTGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGACTCGACGAACTTTCTaGTCATCCCAGCTGAAAGTG +
Preference number: 4 (lower is better)
Translates to: GWQLVLYLVSQERRGGTGTRRTF*SSQLKV
Trigger: CACTTTCAGCTGGGATGACCAGAAAGTTCGTCGAGT...CCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320634.8
ENST00000550890.5
CDS-3UTR CCA 90 bp AAAATATACTCCTCAGGGCTCAGCGAGTGGCGTCGGTTACCCATCAGCAACTGGAGCCAGGGCACATATTaGAAGGGTAGGAGGATGGCC +
Preference number: 4 (lower is better)
Translates to: KIYSSGLSEWRRLPISNWSQGTY*KGRRMA
Trigger: GGCCATCCTCCTACCCTTCCAATATGTGCCCTGGCT...CCAGTTGCTGATGGGTAACCGACGCCACTCGCTGAGCCCTGAGGAGTATATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550195.5
CDS-3UTR CCA 90 bp CAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGAACCAGTTACCCATCAGCAACTaGGTGTCAAGTGCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: QLVLYLVSQERRGGTGNQLPISN*VSSARN
Trigger: GTTCCTGGCACTTGACACCCAGTTGCTGATGGGTAA...CTGGTTCCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320634.8
ENST00000550890.5
CDS-3UTR CCA 90 bp AGACTCCCTTCCTCCTTTACAGCTTGTGACACCTGCTCAGCTGCGGTTTCCTTAGTGAGTGAGAGGATGTaGGTCTCGGTCCTGCAACCC +
Preference number: 4 (lower is better)
Translates to: RLPSSFTACDTCSAAVSLVSERM*VSVLQP
Trigger: GGGTTGCAGGACCGAGACCCACATCCTCTCACTCAC...TAAGGAAACCGCAGCTGAGCAGGTGTCACAAGCTGTAAAGGAGGAAGGGAGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp CCCCCAGAACATCCAGCCGGAGGGCCCAATCACACCTCACTCAGCCTTAGGCCTGGATGGCTTCCAAATTaGAGAGATGCAGAGATAAGT +
Preference number: 4 (lower is better)
Translates to: PPEHPAGGPNHTSLSLRPGWLPN*RDAEIS
Trigger: ACTTATCTCTGCATCTCTCCAATTTGGAAGCCATCC...AGGCCTAAGGCTGAGTGAGGTGTGATTGGGCCCTCCGGCTGGATGTTCTGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp AGACCCTCTCCTATTGCCCTTGGCCTCCAGGTCCAAATCCCTAGAACAAGCCGCAGGCAAGGAGCCTTTTaGAAAATGGGTGTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: RPSPIALGLQVQIPRTSRRQGAF*KMGVCP
Trigger: GGGACAGACACCCATTTTCCAAAAGGCTCCTTGCCT...GCGGCTTGTTCTAGGGATTTGGACCTGGAGGCCAAGGGCAATAGGAGAGGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp TGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGAACGCTAAGGGTCTGTTCTaGCCTCATCCTGTAGGAATC +
Preference number: 4 (lower is better)
Translates to: WQLVLYLVSQERRGGTGNAKGLF*PHPVGI
Trigger: GATTCCTACAGGATGAGGCCAGAACAGACCCTTAGC...GTTCCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550890.5
CDS-3UTR CCA 90 bp CAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGAACCAGCAAGGAGAATGGAGATaGGAGAGAGAAGGGCAACAG +
Preference number: 4 (lower is better)
Translates to: QLVLYLVSQERRGGTGNQQGEWR*EREGQQ
Trigger: CTGTTGCCCTTCTCTCTCCCATCTCCATTCTCCTTG...CTGGTTCCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550890.5
3UTR CAA 72 bp AAGCAGCAGACAGCACAGGCTTCAGACCCTCTCCTATaGCCCTTGGCCTCCAGGTCCAAATCCCTAGAACAA +
Preference number: 4 (lower is better)
Translates to: KQQTAQASDPLL*PLASRSKSLEQ
Trigger: TTGTTCTAGGGATTTGGACCTGGAGGCCAAGGGCAATAGGAGAGGGTCTGAAGCCTGTGCTGTCTGCTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR TCA 90 bp GGGTTGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGTGGTGTAGACCTTTCTaGCAAAGACTCGACGAACTT +
Preference number: 4 (lower is better)
Translates to: GLAASFISGLAGAQGRDRWCRPF*QRLDEL
Trigger: AAGTTCGTCGAGTCTTTGTCAGAAAGGTCTACACCA...CCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320634.8
ENST00000550890.5
CDS-3UTR TCA 90 bp GTTGAGGGCTCCAAAAATATACTCCTCAGGGCTCAGCGAGTGGCGTCGGTTACCGGGAGGGGTTCTTTCTaGCAAAGACTCGACGAACTT +
Preference number: 4 (lower is better)
Translates to: VEGSKNILLRAQRVASVTGRGSF*QRLDEL
Trigger: AAGTTCGTCGAGTCTTTGTCAGAAAGAACCCCTCCC...GGTAACCGACGCCACTCGCTGAGCCCTGAGGAGTATATTTTTGGAGCCCTCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550195.5
CDS-3UTR TCA 90 bp AAGTGCCAGGAACAATGTAAATACACCCGCTCCCAGTGCTGCATAAACTGCATGCGCCCTGGCAGGAGGTaGAGTCGAACTGGACAGCAT +
Preference number: 4 (lower is better)
Translates to: KCQEQCKYTRSQCCINCMRPGRR*SRTGQH
Trigger: ATGCTGTCCAGTTCGACTTCACCTCCTGCCAGGGCG...CATGCAGTTTATGCAGCACTGGGAGCGGGTGTATTTACATTGTTCCTGGCACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550195.5
CDS-3UTR GCA 90 bp CATCAGCAACTGGGTGTCAAGTGCCAGGAACAATGTAAATACACCCGCTCCCAGAGGTTCCAGGGGAAATaGCTCCTGGGTCCAGAACAG +
Preference number: 4 (lower is better)
Translates to: HQQLGVKCQEQCKYTRSQRFQGK*LLGPEQ
Trigger: CTGTTCTGGACCCAGGAGGCATTTCCCCTGGAACCT...CTGGGAGCGGGTGTATTTACATTGTTCCTGGCACTTGACACCCAGTTGCTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550195.5
CDS-3UTR GCA 90 bp TTGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGAACAGTGCTGCATAAACTaGATGGAGCCAGGGCACATA +
Preference number: 4 (lower is better)
Translates to: LAASFISGLAGAQGRDREQCCIN*MEPGHI
Trigger: TATGTGCCCTGGCTCCATGCAGTTTATGCAGCACTG...TTCCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320634.8
ENST00000550890.5
CDS-3UTR GCA 90 bp AGCCTTGACCGTCCCAGTTTGGAAGATGTAACGGGCGAATGGGGCGGCACAGGGCAACTGGGTGTCAAGTaGCAGGAACAATGTAAATAC +
Preference number: 4 (lower is better)
Translates to: SLDRPSLEDVTGEWGGTGQLGVK*QEQCKY
Trigger: GTATTTACATTGTTCCTGGCACTTGACACCCAGTTG...CCCTGTGCCGCCCCATTCGCCCGTTACATCTTCCAAACTGGGACGGTCAAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp TCAGCGAGTGGCGTCGGTTACCCATCAGCAACTGGGTGTCAAGTGCCAGGAACAACTCGACGAACTTTCTaGTCATCCCAGCTGAAAGTG +
Preference number: 4 (lower is better)
Translates to: SASGVGYPSATGCQVPGTTRRTF*SSQLKV
Trigger: CACTTTCAGCTGGGATGACCAGAAAGTTCGTCGAGT...TGTTCCTGGCACTTGACACCCAGTTGCTGATGGGTAACCGACGCCACTCGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550195.5
CDS-3UTR CCA 90 bp AGCCTTGACCGTCCCAGTTTGGAAGATGTAACGGGCGAATGGGGCGGCACAGGGTTAGCATCAGCTGGATaGCTTCCAAATTGGAGAGAT +
Preference number: 4 (lower is better)
Translates to: SLDRPSLEDVTGEWGGTGLASAG*LPNWRD
Trigger: ATCTCTCCAATTTGGAAGCCATCCAGCTGATGCTAA...CCCTGTGCCGCCCCATTCGCCCGTTACATCTTCCAAACTGGGACGGTCAAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp TGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGAACTCAGAGTGCAAAATCTaGCGAGGGGTTTCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: WQLVLYLVSQERRGGTGNSECKI*RGVSGK
Trigger: CTTTCCTGAAACCCCTCGCCAGATTTTGCACTCTGA...GTTCCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp CAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGAACCAGCTCCCAGCTCTTGTCTaGAAGATAGAAACCTCAGAG +
Preference number: 4 (lower is better)
Translates to: QLVLYLVSQERRGGTGNQLPALV*KIETSE
Trigger: CTCTGAGGTTTCTATCTTCCAGACAAGAGCTGGGAG...CTGGTTCCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320634.8
3UTR CAA 72 bp GCTTGTGACACCTGCTCAGCTGCGGTTTCCTTAATCTaGCATTCCTGTTCCCCTGCCCTTCCTACTTCTGAC +
Preference number: 4 (lower is better)
Translates to: ACDTCSAAVSLI*HSCSPALPTSD
Trigger: GTCAGAAGTAGGAAGGGCAGGGGAACAGGAATGCAAGATTAAGGAAACCGCAGCTGAGCAGGTGTCACAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR TCA 90 bp AAGCTGATAAGGAGCCCTGGCCTCATTACATGGGACCAGCTGGAGGGACTGGCCGGCAGATGGAAAAACTaGATTCCAGACAGCAAGAAA +
Preference number: 4 (lower is better)
Translates to: KLIRSPGLITWDQLEGLAGRWKN*IPDSKK
Trigger: TTTCTTGCTGTCTGGAATTCAGTTTTTCCATCTGCC...GGCCAGTCCCTCCAGCTGGTCCCATGTAATGAGGCCAGGGCTCCTTATCAGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR TCA 90 bp TGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGAACTTTCTCAAATGGCTGTaGTGCGTGTGTGACACTGTT +
Preference number: 4 (lower is better)
Translates to: WQLVLYLVSQERRGGTGNFLKWL*CVCDTV
Trigger: AACAGTGTCACACACGCATCACAGCCATTTGAGAAA...GTTCCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR GCA 90 bp AGGGCTCCAAAAATATACTCCTCAGGGCTCAGCGAGTGGCGTCGGTTACCCATCCAGGGTCAGGTAGGTTaGAAAGAACACAGCATAGGA +
Preference number: 4 (lower is better)
Translates to: RAPKIYSSGLSEWRRLPIQGQVG*KEHSIG
Trigger: TCCTATGCTGTGTTCTTTGCAACCTACCTGACCCTG...GATGGGTAACCGACGCCACTCGCTGAGCCCTGAGGAGTATATTTTTGGAGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550195.5
CDS-3UTR GCA 90 bp CCCAGTTTGGAAGATGTAACGGGCGAATGGGGCGGCACAGGGATTGACGTGGCCTTAGTGCCAAAAAGCTaGAGGAAGAAGGTGAAGATA +
Preference number: 4 (lower is better)
Translates to: PSLEDVTGEWGGTGIDVALVPKS*RKKVKI
Trigger: TATCTTCACCTTCTTCCTGCAGCTTTTTGGCACTAA...GGCCACGTCAATCCCTGTGCCGCCCCATTCGCCCGTTACATCTTCCAAACTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR GCA 90 bp CTTCCAGAAGAGGACTTCAGTGGGAGACCCCTCAACTCACATTCCGGACAGTCATGTGACACTGTTTATTaGCGAGGACCTGTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: LPEEDFSGRPLNSHSGQSCDTVY*RGPVPP
Trigger: AGGAGGGACAGGTCCTCGGCAATAAACAGTGTCACA...TGACTGTCCGGAATGTGAGTTGAGGGGTCTCCCACTGAAGTCCTCTTCTGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp CGGTTACCCATCAGCAACTGGGTGTCAAGTGCCAGGAACAATGTAAATACACCCAGGGGAAATGCCTCCTaGGTCCAGAACAGCAAGCCA +
Preference number: 4 (lower is better)
Translates to: RLPISNWVSSARNNVNTPRGNAS*VQNSKP
Trigger: TGGCTTGCTGTTCTGGACCCAGGAGGCATTTCCCCT...GGGTGTATTTACATTGTTCCTGGCACTTGACACCCAGTTGCTGATGGGTAACCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550195.5
CDS-3UTR CCA 90 bp TTGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGAAAAGTCGAACTTGGTCTaGAAGCTGAAGACGGTGACT +
Preference number: 4 (lower is better)
Translates to: LAASFISGLAGAQGRDREKSNLV*KLKTVT
Trigger: AGTCACCGTCTTCAGCTTCCAGACCAAGTTCGACTT...TTCCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320634.8
ENST00000550890.5
CDS-3UTR CCA 90 bp CGTCGGTTACCCATCAGCAACTGGGTGTCAAGTGCCAGGAACAATGTAAATACAGCTGAATCAGCAGGATaGTGTAGACCTGGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: RRLPISNWVSSARNNVNTAESAG*CRPGGG
Trigger: CCCACCCCCAGGTCTACACCATCCTGCTGATTCAGC...TGTATTTACATTGTTCCTGGCACTTGACACCCAGTTGCTGATGGGTAACCGACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550195.5
CDS-3UTR GCA 90 bp GGGGCAGGGAGGGCTCCTCATTCTCGGTTAGTGCCAAAAAGCTGCAGGAAGAAGCAACTGGGTGTCAAGTaGCAGGAACAATGTAAATAC +
Preference number: 4 (lower is better)
Translates to: GAGRAPHSRLVPKSCRKKQLGVK*QEQCKY
Trigger: GTATTTACATTGTTCCTGGCACTTGACACCCAGTTG...CTTCTTCCTGCAGCTTTTTGGCACTAACCGAGAATGAGGAGCCCTCCCTGCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550195.5
CDS-3UTR GCA 90 bp TGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGAACCAACTGGGTGTCAAGTaGCAGGAACAATGTAAATAC +
Preference number: 4 (lower is better)
Translates to: WQLVLYLVSQERRGGTGNQLGVK*QEQCKY
Trigger: GTATTTACATTGTTCCTGGCACTTGACACCCAGTTG...GTTCCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320634.8
ENST00000550890.5
CDS-3UTR GCA 90 bp GGGTTGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGTTAGTGCCAAAAAGCTaGAGGAAGAAGGTGAAGATA +
Preference number: 4 (lower is better)
Translates to: GLAASFISGLAGAQGRDRLVPKS*RKKVKI
Trigger: TATCTTCACCTTCTTCCTGCAGCTTTTTGGCACTAA...CCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCAACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000320634.8
ENST00000550890.5
CDS-3UTR GCA 90 bp TTGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGAAATAGAAACCTCAGAGTaGAAAATCTGGCGAGGGGTT +
Preference number: 4 (lower is better)
Translates to: LAASFISGLAGAQGRDREIETSE*KIWRGV
Trigger: AACCCCTCGCCAGATTTTGCACTCTGAGGTTTCTAT...TTCCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR GCA 90 bp CTTCCAGAAGAGGACTTCAGTGGGAGACCCCTCAACTCACATTCCGGACAGTCAACTGTGTCCGAGAGATaGAACCATCGTTCGGCAAAA +
Preference number: 4 (lower is better)
Translates to: LPEEDFSGRPLNSHSGQSTVSER*NHRSAK
Trigger: TTTTGCCGAACGATGGTTGCATCTCTCGGACACAGT...TGACTGTCCGGAATGTGAGTTGAGGGGTCTCCCACTGAAGTCCTCTTCTGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CCA 90 bp TTGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGAATTCCTGGAACTTTCATaGTTCCTTCCTTACCTGCAC +
Preference number: 4 (lower is better)
Translates to: LAASFISGLAGAQGRDREFLELS*FLPYLH
Trigger: GTGCAGGTAAGGAAGGAACCATGAAAGTTCCAGGAA...TTCCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550890.5
CDS-3UTR GCA 90 bp AAGTGCCAGGAACAATGTAAATACACCCGCTCCCAGTGCTGCATAAACTGCATGTACACCCGCTCCCAGTaGTGCATAAACTGCATGGAG +
Preference number: 4 (lower is better)
Translates to: KCQEQCKYTRSQCCINCMYTRSQ*CINCME
Trigger: CTCCATGCAGTTTATGCAGCACTGGGAGCGGGTGTA...CATGCAGTTTATGCAGCACTGGGAGCGGGTGTATTTACATTGTTCCTGGCACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550195.5
CDS-3UTR CCA 90 bp CAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGAACCAGCAACTCTTCAATTCCTaGAACTTTCATGGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: QLVLYLVSQERRGGTGNQQLFNS*NFHGSF
Trigger: GAAGGAACCATGAAAGTTCCAGGAATTGAAGAGTTG...CTGGTTCCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550890.5
CDS-3UTR TCA 90 bp CAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGAACCAGTGTCTAGGTAAATGTTaGGGGCTCCAAAAATATACT +
Preference number: 4 (lower is better)
Translates to: QLVLYLVSQERRGGTGNQCLGKC*GLQKYT
Trigger: AGTATATTTTTGGAGCCCTCAACATTTACCTAGACA...CTGGTTCCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000320634.8
ENST00000550890.5
CDS-3UTR GCA 90 bp GTTGAGGGCTCCAAAAATATACTCCTCAGGGCTCAGCGAGTGGCGTCGGTTACCTTAGTGCCAAAAAGCTaGAGGAAGAAGGTGAAGATA +
Preference number: 4 (lower is better)
Translates to: VEGSKNILLRAQRVASVTLVPKS*RKKVKI
Trigger: TATCTTCACCTTCTTCCTGCAGCTTTTTGGCACTAA...GGTAACCGACGCCACTCGCTGAGCCCTGAGGAGTATATTTTTGGAGCCCTCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000550195.5
CDS-3UTR TCA 90 bp CGGTTACCCATCAGCAACTGGGTGTCAAGTGCCAGGAACAATGTAAATACACCCTGTCTAGGTAAATGTTaGGGGCTCCAAAAATATACT +
Preference number: 4 (lower is better)
Translates to: RLPISNWVSSARNNVNTPCLGKC*GLQKYT
Trigger: AGTATATTTTTGGAGCCCTCAACATTTACCTAGACA...GGGTGTATTTACATTGTTCCTGGCACTTGACACCCAGTTGCTGATGGGTAACCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550195.5
CDS-3UTR CAA 90 bp ACCCACCTCTCTGCGCTCTCATGTGGTCTCATTCCGGCCCCCACCCAGGCCCAGGGCCCGGGTGGCCGCTaGGGTAACCGCAGCCTGCCT +
Preference number: 5 (lower is better)
Translates to: THLSALSCGLIPAPTQAQGPGGR*GNRSLP
Trigger: AGGCAGGCTGCGGTTACCCAAGCGGCCACCCGGGCC...CTGGGCCTGGGTGGGGGCCGGAATGAGACCACATGAGAGCGCAGAGAGGTGGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS CCA 90 bp CGCTTGGGTAACCGCAGCCTGCCTGCGTCTCTTCCTTCCTCCGCGTaGGTTCTAGCAACATCCACTGCAGCCGGGCCAGGCGAGCCGGCG +
Preference number: 5 (lower is better)
Translates to: RLGNRSLPASLPSSA*VLATSTAAGPGEPA
Trigger: CGCCGGCTCGCCTGGCCCGGCTGCAGTGGATGTTGCTAGAACCCACGCGGAGGAAGGAAGAGACGCAGGCAGGCTGCGGTTACCCAAGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550635.6
CDS-3UTR CAA 90 bp GGGGCGGCACAGGGATTGACGTGGCCTCAGTTCCTCAGGGTCCCCATGGCGTATCGGCTCAGGGAGGGCTaGGGAGGGGGTACACTGTGT +
Preference number: 5 (lower is better)
Translates to: GAAQGLTWPQFLRVPMAYRLREG*GGGTLC
Trigger: ACACAGTGTACCCCCTCCCAAGCCCTCCCTGAGCCG...ATACGCCATGGGGACCCTGAGGAACTGAGGCCACGTCAATCCCTGTGCCGCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CAA 90 bp GCGAGTGGCGTCGGTTACCCATCAGCAACTGGGTGTCAAGTGCCAGGAACAATGGGCCCGGGTGGCCGCTaGGGTAACCGCAGCCTGCCT +
Preference number: 5 (lower is better)
Translates to: ASGVGYPSATGCQVPGTMGPGGR*GNRSLP
Trigger: AGGCAGGCTGCGGTTACCCAAGCGGCCACCCGGGCC...CATTGTTCCTGGCACTTGACACCCAGTTGCTGATGGGTAACCGACGCCACTCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550195.5
CDS-3UTR CAA 90 bp GATGGGGCTGGGAAGGAACAGCACACCTCGTCTCCCTTCCCAAGGCAGACGGAGGGGGCGGCACAGGGATaGACGTGGCCTCAGTTCCTC +
Preference number: 5 (lower is better)
Translates to: DGAGKEQHTSSPFPRQTEGAAQG*TWPQFL
Trigger: GAGGAACTGAGGCCACGTCAATCCCTGTGCCGCCCC...CTCCGTCTGCCTTGGGAAGGGAGACGAGGTGTGCTGTTCCTTCCCAGCCCCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CAA 90 bp GATGGGGCTGGGAAGGAACAGCACACCTCGTCTCCCTTCCCAAGGCAGACGGAGGCGGGTCTGGGTGGATaGGCTCCCCAGCTCCCACTT +
Preference number: 5 (lower is better)
Translates to: DGAGKEQHTSSPFPRQTEAGLGG*APQLPL
Trigger: AAGTGGGAGCTGGGGAGCCAATCCACCCAGACCCGC...CTCCGTCTGCCTTGGGAAGGGAGACGAGGTGTGCTGTTCCTTCCCAGCCCCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CAA 90 bp GGGGCGGCACAGGGATTGACGTGGCCTCAGTTCCTCAGGGTCCCCATGGCGTATTCAGACCCTCTCCTATaGCCCTTGGCCTCCAGGTCC +
Preference number: 5 (lower is better)
Translates to: GAAQGLTWPQFLRVPMAYSDPLL*PLASRS
Trigger: GGACCTGGAGGCCAAGGGCAATAGGAGAGGGTCTGA...ATACGCCATGGGGACCCTGAGGAACTGAGGCCACGTCAATCCCTGTGCCGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CAA 90 bp TCCTCAGGGTCCCCATGGCGTATGTACAAGCGGCAGAGGGCTGGGCTGGGCTGGTGGCAGCTACAGCGATaGCCTCCTCCCCCAGAACAT +
Preference number: 5 (lower is better)
Translates to: SSGSPWRMYKRQRAGLGWWQLQR*PPPPEH
Trigger: ATGTTCTGGGGGAGGAGGCAATCGCTGTAGCTGCCA...CCAGCCCAGCCCAGCCCTCTGCCGCTTGTACATACGCCATGGGGACCCTGAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CAA 90 bp GATGGGGCTGGGAAGGAACAGCACACCTCGTCTCCCTTCCCAAGGCAGACGGAGTCCACTGGCCTGGAGTaGGCCACTGCACATGCTGGC +
Preference number: 5 (lower is better)
Translates to: DGAGKEQHTSSPFPRQTESTGLE*ATAHAG
Trigger: GCCAGCATGTGCAGTGGCCAACTCCAGGCCAGTGGA...CTCCGTCTGCCTTGGGAAGGGAGACGAGGTGTGCTGTTCCTTCCCAGCCCCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CAA 90 bp GGGCTCAGCGAGTGGCGTCGGTTACCCATCAGCAACTGGGTGTCAAGTGCCAGGTCGGTCCCAGGGGCCTaGTTAGCCACGGAGAGCTTT +
Preference number: 5 (lower is better)
Translates to: GLSEWRRLPISNWVSSARSVPGA*LATESF
Trigger: AAAGCTCTCCGTGGCTAACAAGGCCCCTGGGACCGA...CCTGGCACTTGACACCCAGTTGCTGATGGGTAACCGACGCCACTCGCTGAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550195.5
CDS-3UTR CAA 90 bp GCCAGTGGACAGCAGGAGTGTCGGGGGTGTGGCAGCTGGCCTGGGTCCCTGGAGTGGCCACAGGCTGGGTaGGCAGCTAGTTTTATATCT +
Preference number: 5 (lower is better)
Translates to: ASGQQECRGCGSWPGSLEWPQAG*AASFIS
Trigger: AGATATAAAACTAGCTGCCAACCCAGCCTGTGGCCA...CTCCAGGGACCCAGGCCAGCTGCCACACCCCCGACACTCCTGCTGTCCACTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CAA 90 bp CACAGTAACTTTCCACTGGCCTGGAGTTGGCCACTGCACATGCTGGCTGCACGCCAGGACACCTGGGACTaGGCTTCAGGTGGGCCAGGG +
Preference number: 5 (lower is better)
Translates to: HSNFPLAWSWPLHMLAARQDTWD*ASGGPG
Trigger: CCCTGGCCCACCTGAAGCCAAGTCCCAGGTGTCCTG...GCGTGCAGCCAGCATGTGCAGTGGCCAACTCCAGGCCAGTGGAAAGTTACTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CAA 90 bp AGCCTTGACCGTCCCAGTTTGGAAGATGTAACGGGCGAATGGGGCGGCACAGGGTCGGTCCCAGGGGCCTaGTTAGCCACGGAGAGCTTT +
Preference number: 5 (lower is better)
Translates to: SLDRPSLEDVTGEWGGTGSVPGA*LATESF
Trigger: AAAGCTCTCCGTGGCTAACAAGGCCCCTGGGACCGA...CCCTGTGCCGCCCCATTCGCCCGTTACATCTTCCAAACTGGGACGGTCAAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CAA 90 bp TCCTCAGGGTCCCCATGGCGTATGTACAAGCGGCAGAGGGCTGGGCTGGGCTGGGAGGTGAAGTCGAACTaGGTCTGGAAGCTGAAGACG +
Preference number: 5 (lower is better)
Translates to: SSGSPWRMYKRQRAGLGWEVKSN*VWKLKT
Trigger: CGTCTTCAGCTTCCAGACCAAGTTCGACTTCACCTC...CCAGCCCAGCCCAGCCCTCTGCCGCTTGTACATACGCCATGGGGACCCTGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CAA 90 bp AGGGAACAGGTGCGGACACTGGGGAACTTGCAGGAGCTAAGGCCAGTGGACAGCCGGACACTGGGGAACTaGCAGGAGCTAAGGCCAGTG +
Preference number: 5 (lower is better)
Translates to: REQVRTLGNLQELRPVDSRTLGN*QELRPV
Trigger: CACTGGCCTTAGCTCCTGCAAGTTCCCCAGTGTCCG...GCTGTCCACTGGCCTTAGCTCCTGCAAGTTCCCCAGTGTCCGCACCTGTTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS TCA 90 bp GCAGGAGGTGAAGTCGAACTTGGTCTGGAAGCTGAAGACGGTGACTaGGAGGCAGACAAGGGCCGTGATGCCCAGGCACAGCAGCACGGA +
Preference number: 5 (lower is better)
Translates to: AGGEVELGLEAEDGD*EADKGRDAQAQQHG
Trigger: TCCGTGCTGCTGTGCCTGGGCATCACGGCCCTTGTCTGCCTCTCAGTCACCGTCTTCAGCTTCCAGACCAAGTTCGACTTCACCTCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320634.8
ENST00000550635.6
ENST00000550890.5
ENST00000552669.5
ENST00000552863.5
CDS CCA 90 bp CTGCTGCCCCTCGGTCCCAGGGGCCTTGTTAGCCACGGAGAGCTATaGAGTAGAGTCAGAGAGAGAGATAGTCACCAGGGAAAGGGAGCC +
Preference number: 5 (lower is better)
Translates to: LLPLGPRGLVSHGEL*SRVRERDSHQGKGA
Trigger: GGCTCCCTTTCCCTGGTGACTATCTCTCTCTCTGACTCTACTCCATAGCTCTCCGTGGCTAACAAGGCCCCTGGGACCGAGGGGCAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550890.5
CDS-3UTR CAA 90 bp AGCCTTGACCGTCCCAGTTTGGAAGATGTAACGGGCGAATGGGGCGGCACAGGGCTAGGCTTCTCCTCCTaGTCCCTTGGACCCTCAAAC +
Preference number: 5 (lower is better)
Translates to: SLDRPSLEDVTGEWGGTGLGFSS*SLGPSN
Trigger: GTTTGAGGGTCCAAGGGACAAGGAGGAGAAGCCTAG...CCCTGTGCCGCCCCATTCGCCCGTTACATCTTCCAAACTGGGACGGTCAAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CAA 90 bp ACACCTCGTCTCCCTTCCCAAGGCAGACGGAGCTCCCAGCACAGGGGAGAGAGATCCTCACTGCCTGGATaGGAGATGGAACGCATAGAC +
Preference number: 5 (lower is better)
Translates to: TPRLPSQGRRSSQHRGERSSLPG*EMERID
Trigger: GTCTATGCGTTCCATCTCCAATCCAGGCAGTGAGGA...TCTCTCTCCCCTGTGCTGGGAGCTCCGTCTGCCTTGGGAAGGGAGACGAGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CAA 90 bp TGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGAACTCGGTCCCAGGGGCCTaGTTAGCCACGGAGAGCTAT +
Preference number: 5 (lower is better)
Translates to: WQLVLYLVSQERRGGTGNSVPGA*LATESY
Trigger: ATAGCTCTCCGTGGCTAACAAGGCCCCTGGGACCGA...GTTCCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550890.5
CDS-3UTR CAA 90 bp TCCTCAGGGTCCCCATGGCGTATGTACAAGCGGCAGAGGGCTGGGCTGGGCTGGTGGATGGCTTCCAAATaGGAGAGATGCAGAGATAAG +
Preference number: 5 (lower is better)
Translates to: SSGSPWRMYKRQRAGLGWWMASK*ERCRDK
Trigger: CTTATCTCTGCATCTCTCCAATTTGGAAGCCATCCA...CCAGCCCAGCCCAGCCCTCTGCCGCTTGTACATACGCCATGGGGACCCTGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CAA 90 bp CCCAGTTTGGAAGATGTAACGGGCGAATGGGGCGGCACAGGGATTGACGTGGCCGAGGCAAGGAGCCTTTaGGAAAATGGGTGTCTGTCC +
Preference number: 5 (lower is better)
Translates to: PSLEDVTGEWGGTGIDVAEARSL*ENGCLS
Trigger: GGACAGACACCCATTTTCCAAAAGGCTCCTTGCCTC...GGCCACGTCAATCCCTGTGCCGCCCCATTCGCCCGTTACATCTTCCAAACTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CAA 90 bp CACAGTAACTTTCCACTGGCCTGGAGTTGGCCACTGCACATGCTGGCTGCACGCCTTGACCGTCCCAGTTaGGAAGATGTAACGGGCGAA +
Preference number: 5 (lower is better)
Translates to: HSNFPLAWSWPLHMLAARLDRPS*EDVTGE
Trigger: TTCGCCCGTTACATCTTCCAAACTGGGACGGTCAAG...GCGTGCAGCCAGCATGTGCAGTGGCCAACTCCAGGCCAGTGGAAAGTTACTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CAA 90 bp AGGGCCATTCACAGCAAGCAGCAGACAGCACAGGCTTCAGACCCTCTCCTATTGGAGGAGCCTTCAGCCTaGACCGTCCCAGTTTGGAAG +
Preference number: 5 (lower is better)
Translates to: RAIHSKQQTAQASDPLLLEEPSA*TVPVWK
Trigger: CTTCCAAACTGGGACGGTCAAGGCTGAAGGCTCCTC...CAATAGGAGAGGGTCTGAAGCCTGTGCTGTCTGCTGCTTGCTGTGAATGGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CAA 90 bp AGGGCCATTCACAGCAAGCAGCAGACAGCACAGGCTTCAGACCCTCTCCTATTGCCTCTCCTATTGCCCTaGGCCTCCAGGTCCAAATCC +
Preference number: 5 (lower is better)
Translates to: RAIHSKQQTAQASDPLLLPLLLP*ASRSKS
Trigger: GGATTTGGACCTGGAGGCCAAGGGCAATAGGAGAGG...CAATAGGAGAGGGTCTGAAGCCTGTGCTGTCTGCTGCTTGCTGTGAATGGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CAA 90 bp AGACCCTCTCCTATTGCCCTTGGCCTCCAGGTCCAAATCCCTAGAACAAGCCGCAGCGTGATACCCTGTTaGCTTGAGGCAGCTGTGGGT +
Preference number: 5 (lower is better)
Translates to: RPSPIALGLQVQIPRTSRSVIPC*LEAAVG
Trigger: ACCCACAGCTGCCTCAAGCAAACAGGGTATCACGCT...GCGGCTTGTTCTAGGGATTTGGACCTGGAGGCCAAGGGCAATAGGAGAGGGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CAA 90 bp GGTTGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGCTTCCTTACCTGCACTaGGAAGCCAGGAATGCAGAC +
Preference number: 5 (lower is better)
Translates to: GWQLVLYLVSQERRGGTGLPYLH*EARNAD
Trigger: GTCTGCATTCCTGGCTTCCAAGTGCAGGTAAGGAAG...CCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550890.5
CDS TCA 90 bp AGGAAGAGCGATTCATCCAAGGTCACAGAGCTGCATGTGGCCCACTaGGAGGCAGGGCCTAGGCATCATCCACTGGGATTGATCCTTCTG +
Preference number: 5 (lower is better)
Translates to: RKSDSSKVTELHVAH*EAGPRHHPLGLILL
Trigger: CAGAAGGATCAATCCCAGTGGATGATGCCTAGGCCCTGCCTCTCAGTGGGCCACATGCAGCTCTGTGACCTTGGATGAATCGCTCTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550890.5
CDS CCA 90 bp TCAGGGTGGAGGAAGGGCAAGAGGATCCAGGCTAAGGGTCTGTTCTaGCCTCATCCTGTAGGAATCTCAGCCTCTCCCCTAAACCAGAAC +
Preference number: 5 (lower is better)
Translates to: SGWRKGKRIQAKGLF*PHPVGISASPLNQN
Trigger: GTTCTGGTTTAGGGGAGAGGCTGAGATTCCTACAGGATGAGGCCAGAACAGACCCTTAGCCTGGATCCTCTTGCCCTTCCTCCACCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550890.5
CDS-3UTR CAA 90 bp TGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGAACGAGGTGAAGTCGAACTaGGTCTGGAAGCTGAAGACG +
Preference number: 5 (lower is better)
Translates to: WQLVLYLVSQERRGGTGNEVKSN*VWKLKT
Trigger: CGTCTTCAGCTTCCAGACCAAGTTCGACTTCACCTC...GTTCCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320634.8
ENST00000550890.5
CDS-3UTR CAA 90 bp GGTTGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGCAGAAACCAGAAATCTaGCCTCCCAGCTCTTGTCTG +
Preference number: 5 (lower is better)
Translates to: GWQLVLYLVSQERRGGTGQKPEI*PPSSCL
Trigger: CAGACAAGAGCTGGGAGGCAAGATTTCTGGTTTCTG...CCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CAA 90 bp TGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGAACCGTCCCCATGGCAGGTaGGAAATGCGAGTCCATTTA +
Preference number: 5 (lower is better)
Translates to: WQLVLYLVSQERRGGTGNRPHGR*EMRVHL
Trigger: TAAATGGACTCGCATTTCCAACCTGCCATGGGGACG...GTTCCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550890.5
CDS CCA 90 bp TGGGGGTGGGAGGGGTTCTTTCTGACAAAGACTCGACGAACTTTCTaGTCATCCCAGCTGAAAGTGGTGAAGAGCTCATGGTCTCCGGTG +
Preference number: 5 (lower is better)
Translates to: WGWEGFFLTKTRRTF*SSQLKVVKSSWSPV
Trigger: CACCGGAGACCATGAGCTCTTCACCACTTTCAGCTGGGATGACCAGAAAGTTCGTCGAGTCTTTGTCAGAAAGAACCCCTCCCACCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550195.5
CDS-3UTR CAA 90 bp AGGGCCATTCACAGCAAGCAGCAGACAGCACAGGCTTCAGACCCTCTCCTATTGCCAGGGTCAGGTAGGTaGCAAAGAACACAGCATAGG +
Preference number: 5 (lower is better)
Translates to: RAIHSKQQTAQASDPLLLPGSGR*QRTQHR
Trigger: CCTATGCTGTGTTCTTTGCAACCTACCTGACCCTGG...CAATAGGAGAGGGTCTGAAGCCTGTGCTGTCTGCTGCTTGCTGTGAATGGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CAA 90 bp CCCAGTTTGGAAGATGTAACGGGCGAATGGGGCGGCACAGGGATTGACGTGGCCCTTCTGCAATGTTTCTaGAAAGCTGGGAGTAGGAAG +
Preference number: 5 (lower is better)
Translates to: PSLEDVTGEWGGTGIDVALLQCF*KAGSRK
Trigger: CTTCCTACTCCCAGCTTTCAAGAAACATTGCAGAAG...GGCCACGTCAATCCCTGTGCCGCCCCATTCGCCCGTTACATCTTCCAAACTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CAA 90 bp TTGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGAAGCGGTTTCCTTAATCTaGCATTCCTGTTCCCCTGCC +
Preference number: 5 (lower is better)
Translates to: LAASFISGLAGAQGRDREAVSLI*HSCSPA
Trigger: GGCAGGGGAACAGGAATGCAAGATTAAGGAAACCGC...TTCCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS-3UTR CAA 90 bp TTGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGAACATCATCCACTGGGATaGATCCTTCTGTTGCGCTGG +
Preference number: 5 (lower is better)
Translates to: LAASFISGLAGAQGRDREHHPLG*ILLLRW
Trigger: CCAGCGCAACAGAAGGATCAATCCCAGTGGATGATG...TTCCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550890.5
CDS-3UTR CAA 90 bp CAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGGAACCAGAGTGTCCACCATTGGTaGTCACTGTCATTGTCCCTG +
Preference number: 5 (lower is better)
Translates to: QLVLYLVSQERRGGTGNQSVHHW*SLSLSL
Trigger: CAGGGACAATGACAGTGACAACCAATGGTGGACACT...CTGGTTCCCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550890.5
CDS-3UTR CAA 90 bp GGGTTGGCAGCTAGTTTTATATCTGGTCTCGCAGGAGCGCAGGGGAGGGACAGGTGGACATGTTTAGCTTaGGTGAGAGGATTTGAGCTG +
Preference number: 5 (lower is better)
Translates to: GLAASFISGLAGAQGRDRWTCLA*VRGFEL
Trigger: CAGCTCAAATCCTCTCACCAAAGCTAAACATGTCCA...CCTGTCCCTCCCCTGCGCTCCTGCGAGACCAGATATAAAACTAGCTGCCAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550890.5
CDS-3UTR CAA 90 bp CTTCCAGAAGAGGACTTCAGTGGGAGACCCCTCAACTCACATTCCGGACAGTCAACCACCCGCCAGTTCTaGGCTCCTTTTCTCTTCAAA +
Preference number: 5 (lower is better)
Translates to: LPEEDFSGRPLNSHSGQSTTRQF*APFLFK
Trigger: TTTGAAGAGAAAAGGAGCCAAGAACTGGCGGGTGGT...TGACTGTCCGGAATGTGAGTTGAGGGGTCTCCCACTGAAGTCCTCTTCTGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320634.8
CDS CCA 90 bp AAATTCTTAGGAGTGTCCACCATTGGTTGTCACTGTCATTGTCCCTaGGGTAGGGGCAGGGTCTCTATGGTTCCAGAAAAGAGCCTGGCA +
Preference number: 5 (lower is better)
Translates to: KFLGVSTIGCHCHCP*GRGRVSMVPEKSLA
Trigger: TGCCAGGCTCTTTTCTGGAACCATAGAGACCCTGCCCCTACCCCAGGGACAATGACAGTGACAACCAATGGTGGACACTCCTAAGAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550890.5
CDS CCA 90 bp ATTGATCCTTCTGTTGCGCTGGAAGTGATGCAAGGAGAATGGAGATaGGAGAGAGAAGGGCAACAGAAAGGGAAGAGGAGAGGGAGAAAA +
Preference number: 5 (lower is better)
Translates to: IDPSVALEVMQGEWR*EREGQQKGKRRGRK
Trigger: TTTTCTCCCTCTCCTCTTCCCTTTCTGTTGCCCTTCTCTCTCCCATCTCCATTCTCCTTGCATCACTTCCAGCGCAACAGAAGGATCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550890.5
CDS CCA 72 bp CTCGGGGAAGGGGTCCCTGAGGCCCGGGTGGCCGCTTaGGTAACCGCAGCCTGCCTGCGTCTCTTCCTTCCT +
Preference number: 6 (lower is better)
Translates to: LGEGVPEARVAA*VTAACLRLFLP
Trigger: AGGAAGGAAGAGACGCAGGCAGGCTGCGGTTACCCAAGCGGCCACCCGGGCCTCAGGGACCCCTTCCCCGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320634.8
ENST00000550635.6
CDS GCA 72 bp GCTGAGGGCACTGCTGGAGCCTCCTTCTTCTCGCCATaGACCTGCTGCTGCCCCTCGGTCCCAGGGGCCTTG +
Preference number: 6 (lower is better)
Translates to: AEGTAGASFFSP*TCCCPSVPGAL
Trigger: CAAGGCCCCTGGGACCGAGGGGCAGCAGCAGGTGCATGGCGAGAAGAAGGAGGCTCCAGCAGTGCCCTCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320634.8
ENST00000547871.1
ENST00000550195.5
ENST00000550635.6
ENST00000550890.5
CDS GCA 72 bp TCTTCCTTCCTCCGCGTGGGTTCTAGCAACATCCACTaGAGCCGGGCCAGGCGAGCCGGCGCGTACCATCGG +
Preference number: 6 (lower is better)
Translates to: SSFLRVGSSNIH*SRARRAGAYHR
Trigger: CCGATGGTACGCGCCGGCTCGCCTGGCCCGGCTGCAGTGGATGTTGCTAGAACCCACGCGGAGGAAGGAAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550635.6
CDS CCA 72 bp AACCGCAGCCTGCCTGCGTCTCTTCCTTCCTCCGCGTaGGTTCTAGCAACATCCACTGCAGCCGGGCCAGGC +
Preference number: 6 (lower is better)
Translates to: NRSLPASLPSSA*VLATSTAAGPG
Trigger: GCCTGGCCCGGCTGCAGTGGATGTTGCTAGAACCCACGCGGAGGAAGGAAGAGACGCAGGCAGGCTGCGGTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550635.6
CDS TCA 72 bp AGGGGCCTTGTTAGCCACGGAGAGGGCACTCCCAAGTaGGGTGTGACCAATGGCGGGAGGTGGTATCACCCA +
Preference number: 6 (lower is better)
Translates to: RGLVSHGEGTPK*GVTNGGRWYHP
Trigger: TGGGTGATACCACCTCCCGCCATTGGTCACACCTCACTTGGGAGTGCCCTCTCCGTGGCTAACAAGGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547871.1
CDS CAA 90 bp TTCTTCTCGCCATGCACCTGCTGCTGCCCCTCGGTCCCAGGGGCCTaGTTAGCCACGGAGAGCTATGGAGTAGAGTCAGAGAGAGAGATA +
Preference number: 6 (lower is better)
Translates to: FFSPCTCCCPSVPGA*LATESYGVESEREI
Trigger: TATCTCTCTCTCTGACTCTACTCCATAGCTCTCCGTGGCTAACAAGGCCCCTGGGACCGAGGGGCAGCAGCAGGTGCATGGCGAGAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550890.5
CDS CCA 72 bp GGAAGAGCGATTCATCCAAGGTCACAGAGCTGCATGTaGCCCACTGAGAGGCAGGGCCTAGGCATCATCCAC +
Preference number: 6 (lower is better)
Translates to: GRAIHPRSQSCM*PTERQGLGIIH
Trigger: GTGGATGATGCCTAGGCCCTGCCTCTCAGTGGGCCACATGCAGCTCTGTGACCTTGGATGAATCGCTCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550890.5
CDS TCA 72 bp GATTCATCCAAGGTCACAGAGCTGCATGTGGCCCACTaGGAGGCAGGGCCTAGGCATCATCCACTGGGATTG +
Preference number: 6 (lower is better)
Translates to: DSSKVTELHVAH*EAGPRHHPLGL
Trigger: CAATCCCAGTGGATGATGCCTAGGCCCTGCCTCTCAGTGGGCCACATGCAGCTCTGTGACCTTGGATGAATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550890.5
CDS GCA 72 bp CCTGGGTCCAGAACAGCAAGCCAGGGTCAGGTAGGTTaGAAAGAACACAGCATAGGATGCCCAGTACCAGCC +
Preference number: 6 (lower is better)
Translates to: PGSRTASQGQVG*KEHSIGCPVPA
Trigger: GGCTGGTACTGGGCATCCTATGCTGTGTTCTTTGCAACCTACCTGACCCTGGCTTGCTGTTCTGGACCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320634.8
ENST00000550195.5
ENST00000550635.6
ENST00000550890.5
ENST00000552669.5
ENST00000552863.5
CDS CCA 72 bp GGGCTCAGCGAGTGGCGTCGGTTACCCATCAGCAACTaGGTGTCAAGTGCCAGGAAATATTGGAAGGGTAGG +
Preference number: 6 (lower is better)
Translates to: GLSEWRRLPISN*VSSARKYWKGR
Trigger: CCTACCCTTCCAATATTTCCTGGCACTTGACACCCAGTTGCTGATGGGTAACCGACGCCACTCGCTGAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552863.5
CDS CCA 72 bp CTCGGTCCCAGGGGCCTTGTTAGCCACGGAGAGCTATaGAGTAGAGTCAGAGAGAGAGATAGTCACCAGGGA +
Preference number: 6 (lower is better)
Translates to: LGPRGLVSHGEL*SRVRERDSHQG
Trigger: TCCCTGGTGACTATCTCTCTCTCTGACTCTACTCCATAGCTCTCCGTGGCTAACAAGGCCCCTGGGACCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550890.5
CDS GCA 72 bp GGCTCAAAGGGAAACGTCCCCATGGCAGGTTGGAAATaGGAGTCCATTTACACTCAGATGTGTCCCCTGCCC +
Preference number: 6 (lower is better)
Translates to: GSKGNVPMAGWK*ESIYTQMCPLP
Trigger: GGGCAGGGGACACATCTGAGTGTAAATGGACTCGCATTTCCAACCTGCCATGGGGACGTTTCCCTTTGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550890.5
CDS CCA 72 bp AGGAAGGGCAAGAGGATCCAGGCTAAGGGTCTGTTCTaGCCTCATCCTGTAGGAATCTCAGCCTCTCCCCTA +
Preference number: 6 (lower is better)
Translates to: RKGKRIQAKGLF*PHPVGISASPL
Trigger: TAGGGGAGAGGCTGAGATTCCTACAGGATGAGGCCAGAACAGACCCTTAGCCTGGATCCTCTTGCCCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550890.5
CDS TCA 72 bp ACTGAGAGGCAGGGCCTAGGCATCATCCACTGGGATTaGTCCTTCTGTTGCGCTGGAAGTGATGCAAGGAGA +
Preference number: 6 (lower is better)
Translates to: TERQGLGIIHWD*SFCCAGSDARR
Trigger: TCTCCTTGCATCACTTCCAGCGCAACAGAAGGATCAATCCCAGTGGATGATGCCTAGGCCCTGCCTCTCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550890.5
CDS GCA 72 bp GGAAATGCGAGTCCATTTACACTCAGATGTGTCCCCTaGCCCCCACCCGTGGACATGTTTAGCTTTGGTGAG +
Preference number: 6 (lower is better)
Translates to: GNASPFTLRCVP*PPPVDMFSFGE
Trigger: CTCACCAAAGCTAAACATGTCCACGGGTGGGGGGCAGGGGACACATCTGAGTGTAAATGGACTCGCATTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550890.5
CDS CCA 72 bp TGCAAAGAACACAGCATAGGATGCCCAGTACCAGCCTaGGTTGGCCTGGACATAGTCCTTGACAGGGTCACA +
Preference number: 6 (lower is better)
Translates to: CKEHSIGCPVPA*VGLDIVLDRVT
Trigger: TGTGACCCTGTCAAGGACTATGTCCAGGCCAACCCAGGCTGGTACTGGGCATCCTATGCTGTGTTCTTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320634.8
ENST00000547871.1
ENST00000550195.5
ENST00000550635.6
ENST00000550890.5
ENST00000552669.5
CDS CCA 72 bp GATGAGGAAACTGAGGCTCAAAGGGAAACGTCCCCATaGCAGGTTGGAAATGCGAGTCCATTTACACTCAGA +
Preference number: 6 (lower is better)
Translates to: DEETEAQRETSP*QVGNASPFTLR
Trigger: TCTGAGTGTAAATGGACTCGCATTTCCAACCTGCCATGGGGACGTTTCCCTTTGAGCCTCAGTTTCCTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550890.5
CDS CCA 72 bp GAGGGGTTCTTTCTGACAAAGACTCGACGAACTTTCTaGTCATCCCAGCTGAAAGTGGTGAAGAGCTCATGG +
Preference number: 6 (lower is better)
Translates to: EGFFLTKTRRTF*SSQLKVVKSSW
Trigger: CCATGAGCTCTTCACCACTTTCAGCTGGGATGACCAGAAAGTTCGTCGAGTCTTTGTCAGAAAGAACCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550195.5