Pregenerated sensors for FAHD2B (Homo sapiens)
Ensembl gene IDs: ENSG00000144199Ensembl transcript IDs: ENST00000468548.1
Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GAGCCTGGAACGTCTTGGCCAGAAAGCAAATATATGCTAAAAGCTTaGGGATGGAACAAACTTGAAGGTCCCTCATTGGCCAAATTGAGG | + |
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Preference number: 5 (lower is better) Translates to: EPGTSWPESKYMLKA*GWNKLEGPSLAKLR Trigger: CCTCAATTTGGCCAATGAGGGACCTTCAAGTTTGTTCCATCCCCAAGCTTTTAGCATATATTTGCTTTCTGGCCAAGACGTTCCAGGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468548.1 |
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| CDS CCA 90 bp | GGAACGTCTTGGCCAGAAAGCAAATATATGCTAAAAGCTTGGGGATaGAACAAACTTGAAGGTCCCTCATTGGCCAAATTGAGGTCACCT | + |
|
Preference number: 5 (lower is better) Translates to: GTSWPESKYMLKAWG*NKLEGPSLAKLRSP Trigger: AGGTGACCTCAATTTGGCCAATGAGGGACCTTCAAGTTTGTTCCATCCCCAAGCTTTTAGCATATATTTGCTTTCTGGCCAAGACGTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000468548.1 |
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| CDS TCA 90 bp | TTAACTCACTTTAGTAAGAGAAAGATTGACATGCCACAAAGGACTTaGGTAAGCAATTCACAAAAAGGTAACGGACATGGCCACAAAACA | + |
|
Preference number: 5 (lower is better) Translates to: LTHFSKRKIDMPQRT*VSNSQKGNGHGHKT Trigger: TGTTTTGTGGCCATGTCCGTTACCTTTTTGTGAATTGCTTACTCAAGTCCTTTGTGGCATGTCAATCTTTCTCTTACTAAAGTGAGTTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000468548.1 |
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| CDS CAA 72 bp | AAAGCTTGGGGATGGAACAAACTTGAAGGTCCCTCATaGGCCAAATTGAGGTCACCTGGCTCTGTGGTGGGA | + |
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Preference number: 6 (lower is better) Translates to: KAWGWNKLEGPS*AKLRSPGSVVG Trigger: TCCCACCACAGAGCCAGGTGACCTCAATTTGGCCAATGAGGGACCTTCAAGTTTGTTCCATCCCCAAGCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468548.1 |
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| CDS TCA 72 bp | TTTAGTAAGAGAAAGATTGACATGCCACAAAGGACTTaGGTAAGCAATTCACAAAAAGGTAACGGACATGGC | + |
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Preference number: 6 (lower is better) Translates to: FSKRKIDMPQRT*VSNSQKGNGHG Trigger: GCCATGTCCGTTACCTTTTTGTGAATTGCTTACTCAAGTCCTTTGTGGCATGTCAATCTTTCTCTTACTAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000468548.1 |
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