RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAF2 (Homo sapiens)

Ensembl gene IDs: ENSG00000113194

Ensembl transcript IDs: ENST00000261942.7, ENST00000504983.1, ENST00000506061.1, ENST00000510446.1, ENST00000510730.5

Found 256 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCCCGCCCTCACAGCATTCTAGGAACTACAGTAACGTCAGTCGGTTaGAGTGGTACAACGAGCCTGCACCAGTCTAGCTACAGAACACTT +
Preference number: 1 (lower is better)
Translates to: PRPHSILGTTVTSVG*SGTTSLHQSSYRTL
Trigger: AAGTGTTCTGTAGCTAGACTGGTGCAGGCTCGTTGTACCACTGCAACCGACTGACGTTACTGTAGTTCCTAGAATGCTGTGAGGGCGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR CCA 90 bp AGTGACAAAATGTGCAGCCTGTATTTGACTGAGGAGGAAAGGAAATaGCACCTAGGCAGCAGCGCTAGGGTCAGCAAGGAGACCGGCCTA +
Preference number: 1 (lower is better)
Translates to: SDKMCSLYLTEEERK*HLGSSARVSKETGL
Trigger: TAGGCCGGTCTCCTTGCTGACCCTAGCGCTGCTGCCTAGGTGCCATTTCCTTTCCTCCTCAGTCAAATACAGGCTGCACATTTTGTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR TCA 90 bp TTCAAGGCCTCTGGTTCTATCCTTAAAACAATAATACACTTCCACTaGGACAGGCAGGGCACTCTCCTGTGGTTCTGCTGGCTCCACCAC +
Preference number: 1 (lower is better)
Translates to: FKASGSILKTIIHFH*DRQGTLLWFCWLHH
Trigger: GTGGTGGAGCCAGCAGAACCACAGGAGAGTGCCCTGCCTGTCTCAGTGGAAGTGTATTATTGTTTTAAGGATAGAACCAGAGGCCTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR CCA 90 bp TGCAGTGGTACAACGAGCCTGCACCAGTCTAGCTACAGAACACTTTaGAATACTTGTCAGAGCGCACTGGCATCTGTTAATACATGGCCT +
Preference number: 1 (lower is better)
Translates to: CSGTTSLHQSSYRTL*NTCQSALASVNTWP
Trigger: AGGCCATGTATTAACAGATGCCAGTGCGCTCTGACAAGTATTCCAAAGTGTTCTGTAGCTAGACTGGTGCAGGCTCGTTGTACCACTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR CCA 90 bp CAGGCTCTCCAAGTTAATTTCTGTGGGGTGCCTTACTCTGCCATGTaGGATTTACCCCAACAACTGAGGACTGCAGTGGATAGTAACCAT +
Preference number: 1 (lower is better)
Translates to: QALQVNFCGVPYSAM*DLPQQLRTAVDSNH
Trigger: ATGGTTACTATCCACTGCAGTCCTCAGTTGTTGGGGTAAATCCCACATGGCAGAGTAAGGCACCCCACAGAAATTAACTTGGAGAGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR CCA 90 bp ATCCCAGAGGTGATGTGGAAACAAGAGCAAATGCTTGCAGATCACTaGCTTCTCAGTGTCTTCTCCCTCGCAGGTCTCATCAAAATCCCA +
Preference number: 1 (lower is better)
Translates to: IPEVMWKQEQMLADH*LLSVFSLAGLIKIP
Trigger: TGGGATTTTGATGAGACCTGCGAGGGAGAAGACACTGAGAAGCCAGTGATCTGCAAGCATTTGCTCTTGTTTCCACATCACCTCTGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR TCA 90 bp TGCACAGGTGGTAAGAAAGGACAGCAAGAGTTGGACCAAAAAGAATaGCCTCTCTGGGAACGTGAGAGGGACAATGGCAGAAATAAGCAC +
Preference number: 1 (lower is better)
Translates to: CTGGKKGQQELDQKE*PLWERERDNGRNKH
Trigger: GTGCTTATTTCTGCCATTGTCCCTCTCACGTTCCCAGAGAGGTCATTCTTTTTGGTCCAACTCTTGCTGTCCTTTCTTACCACCTGTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR TCA 90 bp CCTGCTGTTCACGCCAGATACATTTTATTGACAGCAGTCAGATGGTaGTTCCACTCATCTGGCCTTGGGACAGCAGAAAACGAAGTGGAA +
Preference number: 1 (lower is better)
Translates to: PAVHARYILLTAVRW*FHSSGLGTAENEVE
Trigger: TTCCACTTCGTTTTCTGCTGTCCCAAGGCCAGATGAGTGGAATCACCATCTGACTGCTGTCAATAAAATGTATCTGGCGTGAACAGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR CCA 90 bp CATTTTATTGACAGCAGTCAGATGGTGATTCCACTCATCTGGCCTTaGGACAGCAGAAAACGAAGTGGAAGAACAATAGCTGGCCAGGGA +
Preference number: 1 (lower is better)
Translates to: HFIDSSQMVIPLIWP*DSRKRSGRTIAGQG
Trigger: TCCCTGGCCAGCTATTGTTCTTCCACTTCGTTTTCTGCTGTCCCAAGGCCAGATGAGTGGAATCACCATCTGACTGCTGTCAATAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR GCA 90 bp GTAAATTATCACATGACTATTCAGGCGCAGTACAAGTTGGGGCACTaGATCCTTTGTGGATGGATTTCCGTTGCTGTGTTCCTCACAAGT +
Preference number: 1 (lower is better)
Translates to: VNYHMTIQAQYKLGH*ILCGWISVAVFLTS
Trigger: ACTTGTGAGGAACACAGCAACGGAAATCCATCCACAAAGGATGCAGTGCCCCAACTTGTACTGCGCCTGAATAGTCATGTGATAATTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR CCA 90 bp CAGATACATTTTATTGACAGCAGTCAGATGGTGATTCCACTCATCTaGCCTTGGGACAGCAGAAAACGAAGTGGAAGAACAATAGCTGGC +
Preference number: 1 (lower is better)
Translates to: QIHFIDSSQMVIPLI*PWDSRKRSGRTIAG
Trigger: GCCAGCTATTGTTCTTCCACTTCGTTTTCTGCTGTCCCAAGGCCAGATGAGTGGAATCACCATCTGACTGCTGTCAATAAAATGTATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR TCA 90 bp GAAGAAAAGACCAGAAGGGCTCCACTGAGGGTACAAATATTCAACTaGCTCCAATCGAGTGTCTTTGCTTGGTCACTTCCCATGGTTATT +
Preference number: 1 (lower is better)
Translates to: EEKTRRAPLRVQIFN*LQSSVFAWSLPMVI
Trigger: AATAACCATGGGAAGTGACCAAGCAAAGACACTCGATTGGAGTCAGTTGAATATTTGTACCCTCAGTGGAGCCCTTCTGGTCTTTTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR CCA 90 bp TATTCAACTGACTCCAATCGAGTGTCTTTGCTTGGTCACTTCCCATaGTTATTCAGCTCAATCTACAACTTCAGTCGTGGGAGTGCAGAA +
Preference number: 1 (lower is better)
Translates to: YSTDSNRVSLLGHFP*LFSSIYNFSRGSAE
Trigger: TTCTGCACTCCCACGACTGAAGTTGTAGATTGAGCTGAATAACCATGGGAAGTGACCAAGCAAAGACACTCGATTGGAGTCAGTTGAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR GCA 90 bp AGGTTTCACGTAAGGTTATCCTTATGTGGAGAACATGGGTTATCCTaGTGTTCACGCCAGATACATTTTATTGACAGCAGTCAGATGGTG +
Preference number: 1 (lower is better)
Translates to: RFHVRLSLCGEHGLS*CSRQIHFIDSSQMV
Trigger: CACCATCTGACTGCTGTCAATAAAATGTATCTGGCGTGAACAGCAGGATAACCCATGTTCTCCACATAAGGATAACCTTACGTGAAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR CCA 90 bp TGCATGGTTGTCAGCAGGAAGGTTTCACGTAAGGTTATCCTTATGTaGAGAACATGGGTTATCCTGCTGTTCACGCCAGATACATTTTAT +
Preference number: 1 (lower is better)
Translates to: CMVVSRKVSRKVILM*RTWVILLFTPDTFY
Trigger: ATAAAATGTATCTGGCGTGAACAGCAGGATAACCCATGTTCTCCACATAAGGATAACCTTACGTGAAACCTTCCTGCTGACAACCATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR TCA 90 bp TTGATGATTTGCCATTTGGAAACAACAGCTGAAATATCCCAGAGGTaGTGTGGAAACAAGAGCAAATGCTTGCAGATCACTGGCTTCTCA +
Preference number: 1 (lower is better)
Translates to: LMICHLETTAEISQR*CGNKSKCLQITGFS
Trigger: TGAGAAGCCAGTGATCTGCAAGCATTTGCTCTTGTTTCCACATCACCTCTGGGATATTTCAGCTGTTGTTTCCAAATGGCAAATCATCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR GCA 90 bp TCCACTGAGGGTACAAATATTCAACTGACTCCAATCGAGTGTCTTTaGTTGGTCACTTCCCATGGTTATTCAGCTCAATCTACAACTTCA +
Preference number: 1 (lower is better)
Translates to: STEGTNIQLTPIECL*LVTSHGYSAQSTTS
Trigger: TGAAGTTGTAGATTGAGCTGAATAACCATGGGAAGTGACCAAGCAAAGACACTCGATTGGAGTCAGTTGAATATTTGTACCCTCAGTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR CCA 90 bp CTGGCTCCACCACAGGCCCTGCTAGTCCTTTGGAAAGGCACCAGGCTTGGCAATAGGCCACAGGAAGGGTaGGCTTGCCAAGCGGGTACG +
Preference number: 2 (lower is better)
Translates to: LAPPQALLVLWKGTRLGNRPQEG*ACQAGT
Trigger: CGTACCCGCTTGGCAAGCCCACCCTTCCTGTGGCCT...ATTGCCAAGCCTGGTGCCTTTCCAAAGGACTAGCAGGGCCTGTGGTGGAGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR TCA 90 bp CTGGCTCCACCACAGGCCCTGCTAGTCCTTTGGAAAGGCACCAGGCTTGGCAATTGGATGGGTCGAAGGTaGAGAGTCTCTGTTCACTGG +
Preference number: 2 (lower is better)
Translates to: LAPPQALLVLWKGTRLGNWMGRR*RVSVHW
Trigger: CCAGTGAACAGAGACTCTTCACCTTCGACCCATCCA...ATTGCCAAGCCTGGTGCCTTTCCAAAGGACTAGCAGGGCCTGTGGTGGAGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR GCA 90 bp CCGCCCTCACAGCATTCTAGGAACTACAGTAACGTCAGTCGGTTGCAGTGGTACCAGGAAGGGTGGGCTTaGCAAGCGGGTACGTTTGTT +
Preference number: 2 (lower is better)
Translates to: PPSQHSRNYSNVSRLQWYQEGWA*QAGTFV
Trigger: AACAAACGTACCCGCTTGGCAAGCCCACCCTTCCTG...GTACCACTGCAACCGACTGACGTTACTGTAGTTCCTAGAATGCTGTGAGGGCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR GCA 90 bp GACTCCAATCGAGTGTCTTTGCTTGGTCACTTCCCATGGTTATTCAGCTCAATCACTCTCCTGTGGTTCTaGTGGCTCCACCACAGGCCC +
Preference number: 2 (lower is better)
Translates to: DSNRVSLLGHFPWLFSSITLLWF*WLHHRP
Trigger: GGGCCTGTGGTGGAGCCAGCAGAACCACAGGAGAGT...GATTGAGCTGAATAACCATGGGAAGTGACCAAGCAAAGACACTCGATTGGAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR GCA 90 bp GAGCAAATGCTTGCAGATCACTGGCTTCTCAGTGTCTTCTCCCTCGCAGGTCTCGTGGTACAACGAGCCTaGACCAGTCTAGCTACAGAA +
Preference number: 2 (lower is better)
Translates to: EQMLADHWLLSVFSLAGLVVQRA*TSLATE
Trigger: TTCTGTAGCTAGACTGGTGCAGGCTCGTTGTACCAC...GAGACCTGCGAGGGAGAAGACACTGAGAAGCCAGTGATCTGCAAGCATTTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR GCA 90 bp CCGCCCTCACAGCATTCTAGGAACTACAGTAACGTCAGTCGGTTGCAGTGGTACACATCTCTGCTTCTCTaGTCTGTGCTTTCTCTTCCC +
Preference number: 2 (lower is better)
Translates to: PPSQHSRNYSNVSRLQWYTSLLL*SVLSLP
Trigger: GGGAAGAGAAAGCACAGAGCAGAGAAGCAGAGATGT...GTACCACTGCAACCGACTGACGTTACTGTAGTTCCTAGAATGCTGTGAGGGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR CCA 90 bp GAGCAAATGCTTGCAGATCACTGGCTTCTCAGTGTCTTCTCCCTCGCAGGTCTCATTTCTTTTAGGGACTaGGGTAGGAGGGGACAGGAA +
Preference number: 2 (lower is better)
Translates to: EQMLADHWLLSVFSLAGLISFRD*GRRGQE
Trigger: TTCCTGTCCCCTCCTACCCCAGTCCCTAAAAGAAAT...GAGACCTGCGAGGGAGAAGACACTGAGAAGCCAGTGATCTGCAAGCATTTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR CCA 90 bp TCAGTGTCTTCTCCCTCGCAGGTCTCATCAAAATCCCAAAAGTCCTTAGGAGTAGCCCTGCTAGTCCTTTaGAAAGGCACCAGGCTTGGC +
Preference number: 2 (lower is better)
Translates to: SVSSPSQVSSKSQKSLGVALLVL*KGTRLG
Trigger: GCCAAGCCTGGTGCCTTTCCAAAGGACTAGCAGGGC...TACTCCTAAGGACTTTTGGGATTTTGATGAGACCTGCGAGGGAGAAGACACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR TCA 90 bp AGTTGTAGAGCGGAGCTCCTTGTTCAAGCACCGGATAATGATGCCCCTGATTTTACCTCTCTGGGAACGTaGGAGGGACAATGGCAGAAA +
Preference number: 2 (lower is better)
Translates to: SCRAELLVQAPDNDAPDFTSLGT*EGQWQK
Trigger: TTTCTGCCATTGTCCCTCTCACGTTCCCAGAGAGGT...AAAATCAGGGGCATCATTATCCGGTGCTTGAACAAGGAGCTCCGCTCTACAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR GCA 90 bp TTCTGGCAGCTGACTTCCTTCACTGAACAACTATTATCAAAAGGCGAGAGGCATTCACTGGAAGGTGCGTaGACAGAGGCCACAGGAAGG +
Preference number: 2 (lower is better)
Translates to: FWQLTSFTEQLLSKGERHSLEGA*TEATGR
Trigger: CCTTCCTGTGGCCTCTGTGCACGCACCTTCCAGTGA...ATGCCTCTCGCCTTTTGATAATAGTTGTTCAGTGAAGGAAGTCAGCTGCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR GCA 90 bp AGTTGTAGAGCGGAGCTCCTTGTTCAAGCACCGGATAATGATGCCCCTGATTTTTGGGGTGCCTTACTCTaGCATGTGGGATTTACCCCA +
Preference number: 2 (lower is better)
Translates to: SCRAELLVQAPDNDAPDFWGALL*HVGFTP
Trigger: TGGGGTAAATCCCACATGGCAGAGTAAGGCACCCCA...AAAATCAGGGGCATCATTATCCGGTGCTTGAACAAGGAGCTCCGCTCTACAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR CCA 90 bp TTGGGGCACTGCATCCTTTGTGGATGGATTTCCGTTGCTGTGTTCCTCACAAGTAGCTGGGACAATGGATaGGTCGAAGGTGAAGAGTCT +
Preference number: 2 (lower is better)
Translates to: LGHCILCGWISVAVFLTSSWDNG*VEGEES
Trigger: AGACTCTTCACCTTCGACCCATCCATTGTCCCAGCT...ACTTGTGAGGAACACAGCAACGGAAATCCATCCACAAAGGATGCAGTGCCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR CCA 90 bp GAGCAAATGCTTGCAGATCACTGGCTTCTCAGTGTCTTCTCCCTCGCAGGTCTCTTTATTACACTATTGTaGGCTAAGGAGCCCAGGGCA +
Preference number: 2 (lower is better)
Translates to: EQMLADHWLLSVFSLAGLFITLL*AKEPRA
Trigger: TGCCCTGGGCTCCTTAGCCCACAATAGTGTAATAAA...GAGACCTGCGAGGGAGAAGACACTGAGAAGCCAGTGATCTGCAAGCATTTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR CCA 90 bp CTGACTCCAATCGAGTGTCTTTGCTTGGTCACTTCCCATGGTTATTCAGCTCAATCCCACTGCTCCAAGTaGGGTGCACAGGTGGTAAGA +
Preference number: 2 (lower is better)
Translates to: LTPIECLCLVTSHGYSAQSHCSK*GAQVVR
Trigger: TCTTACCACCTGTGCACCCCACTTGGAGCAGTGGGA...TTGAGCTGAATAACCATGGGAAGTGACCAAGCAAAGACACTCGATTGGAGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR CCA 90 bp AGTTGTAGAGCGGAGCTCCTTGTTCAAGCACCGGATAATGATGCCCCTGATTTTGAAAGGCACCAGGCTTaGCAATTCAGGAAAGCCCAG +
Preference number: 2 (lower is better)
Translates to: SCRAELLVQAPDNDAPDFERHQA*QFRKAQ
Trigger: CTGGGCTTTCCTGAATTGCCAAGCCTGGTGCCTTTC...AAAATCAGGGGCATCATTATCCGGTGCTTGAACAAGGAGCTCCGCTCTACAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR CCA 90 bp AAGTCCTTAGGAGTAACACAGATTGTACTGGCATTAAGTGACAAAATGTGCAGCCTCCTGTGGTTCTGCTaGCTCCACCACAGGCCCTGC +
Preference number: 2 (lower is better)
Translates to: KSLGVTQIVLALSDKMCSLLWFC*LHHRPC
Trigger: GCAGGGCCTGTGGTGGAGCCAGCAGAACCACAGGAG...GCTGCACATTTTGTCACTTAATGCCAGTACAATCTGTGTTACTCCTAAGGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR TCA 90 bp ACAATGGCAGAAATAAGCACAAACCAGCCCGGGGCACTTTTATTACACTATTGTCGCACACACAGGTTGTaGCTCTTACGGGCAGCATGG +
Preference number: 2 (lower is better)
Translates to: TMAEISTNQPGALLLHYCRTHRL*LLRAAW
Trigger: CCATGCTGCCCGTAAGAGTCACAACCTGTGTGTGCG...ACAATAGTGTAATAAAAGTGCCCCGGGCTGGTTTGTGCTTATTTCTGCCATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR TCA 90 bp TTGGGGCACTGCATCCTTTGTGGATGGATTTCCGTTGCTGTGTTCCTCACAAGTCAGCCTGTATTTGACTaGGGAGGAAAGGAAATGGCA +
Preference number: 2 (lower is better)
Translates to: LGHCILCGWISVAVFLTSQPVFD*GGKEMA
Trigger: TGCCATTTCCTTTCCTCCTCAGTCAAATACAGGCTG...ACTTGTGAGGAACACAGCAACGGAAATCCATCCACAAAGGATGCAGTGCCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR TCA 90 bp GAGCAAATGCTTGCAGATCACTGGCTTCTCAGTGTCTTCTCCCTCGCAGGTCTCTGTACTGGCATTAAGTaGCAAAATGTGCAGCCTGTA +
Preference number: 2 (lower is better)
Translates to: EQMLADHWLLSVFSLAGLCTGIK*QNVQPV
Trigger: TACAGGCTGCACATTTTGTCACTTAATGCCAGTACA...GAGACCTGCGAGGGAGAAGACACTGAGAAGCCAGTGATCTGCAAGCATTTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR GCA 90 bp GACTCCAATCGAGTGTCTTTGCTTGGTCACTTCCCATGGTTATTCAGCTCAATCGTAACGTCAGTCGGTTaGAGTGGTACAACGAGCCTG +
Preference number: 2 (lower is better)
Translates to: DSNRVSLLGHFPWLFSSIVTSVG*SGTTSL
Trigger: CAGGCTCGTTGTACCACTGCAACCGACTGACGTTAC...GATTGAGCTGAATAACCATGGGAAGTGACCAAGCAAAGACACTCGATTGGAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR CCA 90 bp AGTTGTAGAGCGGAGCTCCTTGTTCAAGCACCGGATAATGATGCCCCTGATTTTTTCCCCAAAGAGGTGTaGACAGTGTACCTAGCCTCA +
Preference number: 2 (lower is better)
Translates to: SCRAELLVQAPDNDAPDFFPKEV*TVYLAS
Trigger: TGAGGCTAGGTACACTGTCCACACCTCTTTGGGGAA...AAAATCAGGGGCATCATTATCCGGTGCTTGAACAAGGAGCTCCGCTCTACAACT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR CCA 90 bp TTGGGGCACTGCATCCTTTGTGGATGGATTTCCGTTGCTGTGTTCCTCACAAGTCCTGATTTTGCATTCTaGGGGTTATCGCTCCTTCTC +
Preference number: 2 (lower is better)
Translates to: LGHCILCGWISVAVFLTSPDFAF*GLSLLL
Trigger: GAGAAGGAGCGATAACCCCCAGAATGCAAAATCAGG...ACTTGTGAGGAACACAGCAACGGAAATCCATCCACAAAGGATGCAGTGCCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR CAA 90 bp ACACAGATTGTACTGGCATTAAGTGACAAAATGTGCAGCCTGTATTaGACTGAGGAGGAAAGGAAATGGCACCTAGGCAGCAGCGCTAGG +
Preference number: 2 (lower is better)
Translates to: TQIVLALSDKMCSLY*TEEERKWHLGSSAR
Trigger: CCTAGCGCTGCTGCCTAGGTGCCATTTCCTTTCCTCCTCAGTCAAATACAGGCTGCACATTTTGTCACTTAATGCCAGTACAATCTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR TCA 90 bp AGTTGTAGAGCGGAGCTCCTTGTTCAAGCACCGGATAATGATGCCCCTGATTTTTTGGACCAAAAAGAATaGCCTCTCTGGGAACGTGAG +
Preference number: 2 (lower is better)
Translates to: SCRAELLVQAPDNDAPDFLDQKE*PLWERE
Trigger: CTCACGTTCCCAGAGAGGTCATTCTTTTTGGTCCAA...AAAATCAGGGGCATCATTATCCGGTGCTTGAACAAGGAGCTCCGCTCTACAACT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR TCA 90 bp TCAGTGTCTTCTCCCTCGCAGGTCTCATCAAAATCCCAAAAGTCCTTAGGAGTAATAATACACTTCCACTaGGACAGGCAGGGCACTCTC +
Preference number: 2 (lower is better)
Translates to: SVSSPSQVSSKSQKSLGVIIHFH*DRQGTL
Trigger: GAGAGTGCCCTGCCTGTCTCAGTGGAAGTGTATTAT...TACTCCTAAGGACTTTTGGGATTTTGATGAGACCTGCGAGGGAGAAGACACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR TCA 90 bp TCAGTGTCTTCTCCCTCGCAGGTCTCATCAAAATCCCAAAAGTCCTTAGGAGTAACAGCAGTCAGATGGTaGTTCCACTCATCTGGCCTT +
Preference number: 2 (lower is better)
Translates to: SVSSPSQVSSKSQKSLGVTAVRW*FHSSGL
Trigger: AAGGCCAGATGAGTGGAATCACCATCTGACTGCTGT...TACTCCTAAGGACTTTTGGGATTTTGATGAGACCTGCGAGGGAGAAGACACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR TCA 90 bp GAGCAAATGCTTGCAGATCACTGGCTTCTCAGTGTCTTCTCCCTCGCAGGTCTCCCAGATACATTTTATTaGCAGCAGTCAGATGGTGAT +
Preference number: 2 (lower is better)
Translates to: EQMLADHWLLSVFSLAGLPDTFY*QQSDGD
Trigger: ATCACCATCTGACTGCTGTCAATAAAATGTATCTGG...GAGACCTGCGAGGGAGAAGACACTGAGAAGCCAGTGATCTGCAAGCATTTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR GCA 90 bp TTGGGGCACTGCATCCTTTGTGGATGGATTTCCGTTGCTGTGTTCCTCACAAGTGAACATGGGTTATCCTaGTGTTCACGCCAGATACAT +
Preference number: 2 (lower is better)
Translates to: LGHCILCGWISVAVFLTSEHGLS*CSRQIH
Trigger: ATGTATCTGGCGTGAACAGCAGGATAACCCATGTTC...ACTTGTGAGGAACACAGCAACGGAAATCCATCCACAAAGGATGCAGTGCCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR CCA 90 bp GGTCTCATCAAAATCCCAAAAGTCCTTAGGAGTAACACAGATTGTACTGGCATTTGTCCCCTTCCCAGCTaGGACAATGGATGGGTCGAA +
Preference number: 2 (lower is better)
Translates to: GLIKIPKVLRSNTDCTGICPLPS*DNGWVE
Trigger: TTCGACCCATCCATTGTCCCAGCTGGGAAGGGGACA...AATGCCAGTACAATCTGTGTTACTCCTAAGGACTTTTGGGATTTTGATGAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR CCA 90 bp GGTCTCATCAAAATCCCAAAAGTCCTTAGGAGTAACACAGATTGTACTGGCATTGTCAGTCGGTTGCAGTaGTACAACGAGCCTGCACCA +
Preference number: 2 (lower is better)
Translates to: GLIKIPKVLRSNTDCTGIVSRLQ*YNEPAP
Trigger: TGGTGCAGGCTCGTTGTACCACTGCAACCGACTGAC...AATGCCAGTACAATCTGTGTTACTCCTAAGGACTTTTGGGATTTTGATGAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR CCA 90 bp AGTTGTAGAGCGGAGCTCCTTGTTCAAGCACCGGATAATGATGCCCCTGATTTTCAGCAGAAAACGAAGTaGAAGAACAATAGCTGGCCA +
Preference number: 2 (lower is better)
Translates to: SCRAELLVQAPDNDAPDFQQKTK*KNNSWP
Trigger: TGGCCAGCTATTGTTCTTCCACTTCGTTTTCTGCTG...AAAATCAGGGGCATCATTATCCGGTGCTTGAACAAGGAGCTCCGCTCTACAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR CCA 90 bp TTCTGGCAGCTGACTTCCTTCACTGAACAACTATTATCAAAAGGCGAGAGGCATCCACTCATCTGGCCTTaGGACAGCAGAAAACGAAGT +
Preference number: 2 (lower is better)
Translates to: FWQLTSFTEQLLSKGERHPLIWP*DSRKRS
Trigger: ACTTCGTTTTCTGCTGTCCCAAGGCCAGATGAGTGG...ATGCCTCTCGCCTTTTGATAATAGTTGTTCAGTGAAGGAAGTCAGCTGCCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR CCA 90 bp TTGGGGCACTGCATCCTTTGTGGATGGATTTCCGTTGCTGTGTTCCTCACAAGTTCGAGTGTCTTTGCTTaGTCACTTCCCATGGTTATT +
Preference number: 2 (lower is better)
Translates to: LGHCILCGWISVAVFLTSSSVFA*SLPMVI
Trigger: AATAACCATGGGAAGTGACCAAGCAAAGACACTCGA...ACTTGTGAGGAACACAGCAACGGAAATCCATCCACAAAGGATGCAGTGCCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR TCA 90 bp GTACTGGCATTAAGTGACAAAATGTGCAGCCTGTATTTGACTGAGGAGGAAAGGTGGGGAGGAAGGCTCTaGCTTAAGTGGAAAAATTCC +
Preference number: 2 (lower is better)
Translates to: VLALSDKMCSLYLTEEERWGGRL*LKWKNS
Trigger: GGAATTTTTCCACTTAAGTCAGAGCCTTCCTCCCCA...CCTTTCCTCCTCAGTCAAATACAGGCTGCACATTTTGTCACTTAATGCCAGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR TCA 90 bp GTACTGGCATTAAGTGACAAAATGTGCAGCCTGTATTTGACTGAGGAGGAAAGGGGCATGTGCTTCCGGTaGATCCTCTTGAAACCTAAA +
Preference number: 2 (lower is better)
Translates to: VLALSDKMCSLYLTEEERGMCFR*ILLKPK
Trigger: TTTAGGTTTCAAGAGGATTCACCGGAAGCACATGCC...CCTTTCCTCCTCAGTCAAATACAGGCTGCACATTTTGTCACTTAATGCCAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR TCA 90 bp CTGACTCCAATCGAGTGTCTTTGCTTGGTCACTTCCCATGGTTATTCAGCTCAATGTGCAGCCTGTATTTaGCTGAGGAGGAAAGGAAAT +
Preference number: 2 (lower is better)
Translates to: LTPIECLCLVTSHGYSAQCAACI*LRRKGN
Trigger: ATTTCCTTTCCTCCTCAGTCAAATACAGGCTGCACA...TTGAGCTGAATAACCATGGGAAGTGACCAAGCAAAGACACTCGATTGGAGTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR GCA 90 bp TGCAGAAGTGGAAGAAAAGACCAGAAGGGCTCCACTGAGGGTACAAATATTCAAAGAAAGGATAAAAGCTaGCTCCAGAAGGTGGCTGCA +
Preference number: 2 (lower is better)
Translates to: CRSGRKDQKGSTEGTNIQRKDKS*LQKVAA
Trigger: TGCAGCCACCTTCTGGAGGCAGCTTTTATCCTTTCT...TTGAATATTTGTACCCTCAGTGGAGCCCTTCTGGTCTTTTCTTCCACTTCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR CCA 90 bp GCAGGAAGGTTTCACGTAAGGTTATCCTTATGTGGAGAACATGGGTTATCCTGCCATATACAGCCTTTGTaGGGCCACAAACCCAGATTT +
Preference number: 2 (lower is better)
Translates to: AGRFHVRLSLCGEHGLSCHIQPL*GHKPRF
Trigger: AAATCTGGGTTTGTGGCCCCACAAAGGCTGTATATG...GCAGGATAACCCATGTTCTCCACATAAGGATAACCTTACGTGAAACCTTCCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR CCA 90 bp GTACTGGCATTAAGTGACAAAATGTGCAGCCTGTATTTGACTGAGGAGGAAAGGAGAGCTGCTATCCTTTaGTTCAGACCCCATAACCAC +
Preference number: 2 (lower is better)
Translates to: VLALSDKMCSLYLTEEERRAAIL*FRPHNH
Trigger: GTGGTTATGGGGTCTGAACCAAAGGATAGCAGCTCT...CCTTTCCTCCTCAGTCAAATACAGGCTGCACATTTTGTCACTTAATGCCAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR CCA 90 bp GTACTGGCATTAAGTGACAAAATGTGCAGCCTGTATTTGACTGAGGAGGAAAGGATAGATTACACAGGCTaGGAGTTCTGTCTTGGCTCC +
Preference number: 2 (lower is better)
Translates to: VLALSDKMCSLYLTEEERIDYTG*EFCLGS
Trigger: GGAGCCAAGACAGAACTCCCAGCCTGTGTAATCTAT...CCTTTCCTCCTCAGTCAAATACAGGCTGCACATTTTGTCACTTAATGCCAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR CCA 90 bp GCAGGAAGGTTTCACGTAAGGTTATCCTTATGTGGAGAACATGGGTTATCCTGCGCATCTGTTAATACATaGCCTGACCCATGTACCCAT +
Preference number: 2 (lower is better)
Translates to: AGRFHVRLSLCGEHGLSCASVNT*PDPCTH
Trigger: ATGGGTACATGGGTCAGGCCATGTATTAACAGATGC...GCAGGATAACCCATGTTCTCCACATAAGGATAACCTTACGTGAAACCTTCCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR TCA 90 bp TGCAGAAGTGGAAGAAAAGACCAGAAGGGCTCCACTGAGGGTACAAATATTCAAATGTCAGAAGAGGAATaGAGAGCTGCTATCCTTTGG +
Preference number: 2 (lower is better)
Translates to: CRSGRKDQKGSTEGTNIQMSEEE*RAAILW
Trigger: CCAAAGGATAGCAGCTCTTCATTCCTCTTCTGACAT...TTGAATATTTGTACCCTCAGTGGAGCCCTTCTGGTCTTTTCTTCCACTTCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR CCA 90 bp CTGACTCCAATCGAGTGTCTTTGCTTGGTCACTTCCCATGGTTATTCAGCTCAAAAGGACAGCAAGAGTTaGACCAAAAAGAATGACCTC +
Preference number: 2 (lower is better)
Translates to: LTPIECLCLVTSHGYSAQKDSKS*TKKNDL
Trigger: GAGGTCATTCTTTTTGGTCCAACTCTTGCTGTCCTT...TTGAGCTGAATAACCATGGGAAGTGACCAAGCAAAGACACTCGATTGGAGTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR CAA 90 bp ATTTCTTCAGTAAATTATCACATGACTATTCAGGCGCAGTACAAGTaGGGGCACTGCATCCTTTGTGGATGGATTTCCGTTGCTGTGTTC +
Preference number: 2 (lower is better)
Translates to: ISSVNYHMTIQAQYK*GHCILCGWISVAVF
Trigger: GAACACAGCAACGGAAATCCATCCACAAAGGATGCAGTGCCCCAACTTGTACTGCGCCTGAATAGTCATGTGATAATTTACTGAAGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR TCA 90 bp TGCAGAAGTGGAAGAAAAGACCAGAAGGGCTCCACTGAGGGTACAAATATTCAATTTGGAAACAACAGCTaGAATATCCCAGAGGTGATG +
Preference number: 2 (lower is better)
Translates to: CRSGRKDQKGSTEGTNIQFGNNS*NIPEVM
Trigger: CATCACCTCTGGGATATTTCAGCTGTTGTTTCCAAA...TTGAATATTTGTACCCTCAGTGGAGCCCTTCTGGTCTTTTCTTCCACTTCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR GCA 90 bp AGTTGTAGAGCGGAGCTCCTTGTTCAAGCACCGGATAATGATGCCCCTGATTTTAGCAATTTTCACAACTaGTCAATTGAAGGTTCTAGG +
Preference number: 2 (lower is better)
Translates to: SCRAELLVQAPDNDAPDFSNFHN*SIEGSR
Trigger: CCTAGAACCTTCAATTGAGCAGTTGTGAAAATTGCT...AAAATCAGGGGCATCATTATCCGGTGCTTGAACAAGGAGCTCCGCTCTACAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR CCA 90 bp AAGTCCTTAGGAGTAACACAGATTGTACTGGCATTAAGTGACAAAATGTGCAGCCTTGTCAGAGCGCACTaGCATCTGTTAATACATGGC +
Preference number: 2 (lower is better)
Translates to: KSLGVTQIVLALSDKMCSLVRAH*HLLIHG
Trigger: GCCATGTATTAACAGATGCCAGTGCGCTCTGACAAG...GCTGCACATTTTGTCACTTAATGCCAGTACAATCTGTGTTACTCCTAAGGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR CCA 90 bp GGTCTCATCAAAATCCCAAAAGTCCTTAGGAGTAACACAGATTGTACTGGCATTGTGATTCCACTCATCTaGCCTTGGGACAGCAGAAAA +
Preference number: 2 (lower is better)
Translates to: GLIKIPKVLRSNTDCTGIVIPLI*PWDSRK
Trigger: TTTTCTGCTGTCCCAAGGCCAGATGAGTGGAATCAC...AATGCCAGTACAATCTGTGTTACTCCTAAGGACTTTTGGGATTTTGATGAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR CAA 90 bp ACTGAGGGTACAAATATTCAACTGACTCCAATCGAGTGTCTTTGCTaGGTCACTTCCCATGGTTATTCAGCTCAATCTACAACTTCAGTC +
Preference number: 2 (lower is better)
Translates to: TEGTNIQLTPIECLC*VTSHGYSAQSTTSV
Trigger: GACTGAAGTTGTAGATTGAGCTGAATAACCATGGGAAGTGACCAAGCAAAGACACTCGATTGGAGTCAGTTGAATATTTGTACCCTCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR GCA 90 bp GGTCTCATCAAAATCCCAAAAGTCCTTAGGAGTAACACAGATTGTACTGGCATTCCTCCAGAAGGTGGCTaGATCAGAAATGAAAATGTG +
Preference number: 2 (lower is better)
Translates to: GLIKIPKVLRSNTDCTGIPPEGG*IRNENV
Trigger: CACATTTTCATTTCTGATGCAGCCACCTTCTGGAGG...AATGCCAGTACAATCTGTGTTACTCCTAAGGACTTTTGGGATTTTGATGAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR GCA 90 bp GGTCTCATCAAAATCCCAAAAGTCCTTAGGAGTAACACAGATTGTACTGGCATTGTGGAAAAATTCCTCTaGATGGTTGTCAGCAGGAAG +
Preference number: 2 (lower is better)
Translates to: GLIKIPKVLRSNTDCTGIVEKFL*MVVSRK
Trigger: CTTCCTGCTGACAACCATGCAGAGGAATTTTTCCAC...AATGCCAGTACAATCTGTGTTACTCCTAAGGACTTTTGGGATTTTGATGAGACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR CCA 90 bp TGCAGAAGTGGAAGAAAAGACCAGAAGGGCTCCACTGAGGGTACAAATATTCAAAAGGTTATCCTTATGTaGAGAACATGGGTTATCCTG +
Preference number: 2 (lower is better)
Translates to: CRSGRKDQKGSTEGTNIQKVILM*RTWVIL
Trigger: CAGGATAACCCATGTTCTCCACATAAGGATAACCTT...TTGAATATTTGTACCCTCAGTGGAGCCCTTCTGGTCTTTTCTTCCACTTCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR CCA 90 bp AGTTGTAGAGCGGAGCTCCTTGTTCAAGCACCGGATAATGATGCCCCTGATTTTACAAGTGTTATCCTCTaGCCATCTCTTATTCAAATA +
Preference number: 2 (lower is better)
Translates to: SCRAELLVQAPDNDAPDFTSVIL*PSLIQI
Trigger: TATTTGAATAAGAGATGGCCAGAGGATAACACTTGT...AAAATCAGGGGCATCATTATCCGGTGCTTGAACAAGGAGCTCCGCTCTACAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR CAA 90 bp GTTATCGCTCCTTCTCAGTCATTTTCTGAAACTCTTTGCTTGGCCTaGGCACCATTAGCAATTTTCACAACTGCTCAATTGAAGGTTCTA +
Preference number: 2 (lower is better)
Translates to: VIAPSQSFSETLCLA*APLAIFTTAQLKVL
Trigger: TAGAACCTTCAATTGAGCAGTTGTGAAAATTGCTAATGGTGCCAAGGCCAAGCAAAGAGTTTCAGAAAATGACTGAGAAGGAGCGATAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR CCA 90 bp GGTCTCATCAAAATCCCAAAAGTCCTTAGGAGTAACACAGATTGTACTGGCATTAGCTACAGAACACTTTaGAATACTTGTCAGAGCGCA +
Preference number: 2 (lower is better)
Translates to: GLIKIPKVLRSNTDCTGISYRTL*NTCQSA
Trigger: TGCGCTCTGACAAGTATTCCAAAGTGTTCTGTAGCT...AATGCCAGTACAATCTGTGTTACTCCTAAGGACTTTTGGGATTTTGATGAGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR CCA 72 bp GTTCTGCTGGCTCCACCACAGGCCCTGCTAGTCCTTTaGAAAGGCACCAGGCTTGGCAATTCAGGAAAGCCC +
Preference number: 3 (lower is better)
Translates to: VLLAPPQALLVL*KGTRLGNSGKP
Trigger: GGGCTTTCCTGAATTGCCAAGCCTGGTGCCTTTCCAAAGGACTAGCAGGGCCTGTGGTGGAGCCAGCAGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR CAA 90 bp CTGGCTCCACCACAGGCCCTGCTAGTCCTTTGGAAAGGCACCAGGCTTGGCAATCGTTTGTTGCTAACCTaGCGCGCACACACAGGTTGT +
Preference number: 3 (lower is better)
Translates to: LAPPQALLVLWKGTRLGNRLLLT*RAHTGC
Trigger: ACAACCTGTGTGTGCGCGCAAGGTTAGCAACAAACG...ATTGCCAAGCCTGGTGCCTTTCCAAAGGACTAGCAGGGCCTGTGGTGGAGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR CAA 90 bp GAGCAAATGCTTGCAGATCACTGGCTTCTCAGTGTCTTCTCCCTCGCAGGTCTCGCCAAGCGGGTACGTTaGTTGCTAACCTTGCGCGCA +
Preference number: 3 (lower is better)
Translates to: EQMLADHWLLSVFSLAGLAKRVR*LLTLRA
Trigger: TGCGCGCAAGGTTAGCAACAAACGTACCCGCTTGGC...GAGACCTGCGAGGGAGAAGACACTGAGAAGCCAGTGATCTGCAAGCATTTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR CAA 90 bp CCGCCCTCACAGCATTCTAGGAACTACAGTAACGTCAGTCGGTTGCAGTGGTACAAGCGGGTACGTTTGTaGCTAACCTTGCGCGCACAC +
Preference number: 3 (lower is better)
Translates to: PPSQHSRNYSNVSRLQWYKRVRL*LTLRAH
Trigger: GTGTGCGCGCAAGGTTAGCAACAAACGTACCCGCTT...GTACCACTGCAACCGACTGACGTTACTGTAGTTCCTAGAATGCTGTGAGGGCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR CCA 72 bp ATGTGCAGCCTGTATTTGACTGAGGAGGAAAGGAAATaGCACCTAGGCAGCAGCGCTAGGGTCAGCAAGGAG +
Preference number: 3 (lower is better)
Translates to: MCSLYLTEEERK*HLGSSARVSKE
Trigger: CTCCTTGCTGACCCTAGCGCTGCTGCCTAGGTGCCATTTCCTTTCCTCCTCAGTCAAATACAGGCTGCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR CAA 90 bp AGTTGTAGAGCGGAGCTCCTTGTTCAAGCACCGGATAATGATGCCCCTGATTTTGGCCCTGCTAGTCCTTaGGAAAGGCACCAGGCTTGG +
Preference number: 3 (lower is better)
Translates to: SCRAELLVQAPDNDAPDFGPASP*ERHQAW
Trigger: CCAAGCCTGGTGCCTTTCCAAAGGACTAGCAGGGCC...AAAATCAGGGGCATCATTATCCGGTGCTTGAACAAGGAGCTCCGCTCTACAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR CCA 72 bp TCAGGCGCAGTACAAGTTGGGGCACTGCATCCTTTGTaGATGGATTTCCGTTGCTGTGTTCCTCACAAGTCC +
Preference number: 3 (lower is better)
Translates to: SGAVQVGALHPL*MDFRCCVPHKS
Trigger: GGACTTGTGAGGAACACAGCAACGGAAATCCATCCACAAAGGATGCAGTGCCCCAACTTGTACTGCGCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR CAA 90 bp TTGGGGCACTGCATCCTTTGTGGATGGATTTCCGTTGCTGTGTTCCTCACAAGTGGAAAGGCACCAGGCTaGGCAATTCAGGAAAGCCCA +
Preference number: 3 (lower is better)
Translates to: LGHCILCGWISVAVFLTSGKAPG*AIQESP
Trigger: TGGGCTTTCCTGAATTGCCAAGCCTGGTGCCTTTCC...ACTTGTGAGGAACACAGCAACGGAAATCCATCCACAAAGGATGCAGTGCCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR CAA 90 bp CCGCCCTCACAGCATTCTAGGAACTACAGTAACGTCAGTCGGTTGCAGTGGTACAACACTTTGGAATACTaGTCAGAGCGCACTGGCATC +
Preference number: 3 (lower is better)
Translates to: PPSQHSRNYSNVSRLQWYNTLEY*SERTGI
Trigger: GATGCCAGTGCGCTCTGACAAGTATTCCAAAGTGTT...GTACCACTGCAACCGACTGACGTTACTGTAGTTCCTAGAATGCTGTGAGGGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR GCA 72 bp CACAGCATTCTAGGAACTACAGTAACGTCAGTCGGTTaGAGTGGTACAACGAGCCTGCACCAGTCTAGCTAC +
Preference number: 3 (lower is better)
Translates to: HSILGTTVTSVG*SGTTSLHQSSY
Trigger: GTAGCTAGACTGGTGCAGGCTCGTTGTACCACTGCAACCGACTGACGTTACTGTAGTTCCTAGAATGCTGTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR CAA 90 bp GAGCAAATGCTTGCAGATCACTGGCTTCTCAGTGTCTTCTCCCTCGCAGGTCTCACTTTTATTACACTATaGTGGGCTAAGGAGCCCAGG +
Preference number: 3 (lower is better)
Translates to: EQMLADHWLLSVFSLAGLTFITL*WAKEPR
Trigger: CCTGGGCTCCTTAGCCCACAATAGTGTAATAAAAGT...GAGACCTGCGAGGGAGAAGACACTGAGAAGCCAGTGATCTGCAAGCATTTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR GCA 72 bp CACATGACTATTCAGGCGCAGTACAAGTTGGGGCACTaGATCCTTTGTGGATGGATTTCCGTTGCTGTGTTC +
Preference number: 3 (lower is better)
Translates to: HMTIQAQYKLGH*ILCGWISVAVF
Trigger: GAACACAGCAACGGAAATCCATCCACAAAGGATGCAGTGCCCCAACTTGTACTGCGCCTGAATAGTCATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR CCA 72 bp GTGATGTGGAAACAAGAGCAAATGCTTGCAGATCACTaGCTTCTCAGTGTCTTCTCCCTCGCAGGTCTCATC +
Preference number: 3 (lower is better)
Translates to: VMWKQEQMLADH*LLSVFSLAGLI
Trigger: GATGAGACCTGCGAGGGAGAAGACACTGAGAAGCCAGTGATCTGCAAGCATTTGCTCTTGTTTCCACATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR CCA 72 bp GCGCAGTACAAGTTGGGGCACTGCATCCTTTGTGGATaGATTTCCGTTGCTGTGTTCCTCACAAGTCCTAAA +
Preference number: 3 (lower is better)
Translates to: AQYKLGHCILCG*ISVAVFLTSPK
Trigger: TTTAGGACTTGTGAGGAACACAGCAACGGAAATCCATCCACAAAGGATGCAGTGCCCCAACTTGTACTGCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR CAA 90 bp ACAATGGCAGAAATAAGCACAAACCAGCCCGGGGCACTTTTATTACACTATTGTACAGGAAGGGTGGGCTaGCCAAGCGGGTACGTTTGT +
Preference number: 3 (lower is better)
Translates to: TMAEISTNQPGALLLHYCTGRVG*PSGYVC
Trigger: ACAAACGTACCCGCTTGGCAAGCCCACCCTTCCTGT...ACAATAGTGTAATAAAAGTGCCCCGGGCTGGTTTGTGCTTATTTCTGCCATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR CAA 90 bp CTGACTCCAATCGAGTGTCTTTGCTTGGTCACTTCCCATGGTTATTCAGCTCAAAGTAACGTCAGTCGGTaGCAGTGGTACAACGAGCCT +
Preference number: 3 (lower is better)
Translates to: LTPIECLCLVTSHGYSAQSNVSR*QWYNEP
Trigger: AGGCTCGTTGTACCACTGCAACCGACTGACGTTACT...TTGAGCTGAATAACCATGGGAAGTGACCAAGCAAAGACACTCGATTGGAGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR TCA 72 bp GGTAAGAAAGGACAGCAAGAGTTGGACCAAAAAGAATaGCCTCTCTGGGAACGTGAGAGGGACAATGGCAGA +
Preference number: 3 (lower is better)
Translates to: GKKGQQELDQKE*PLWERERDNGR
Trigger: TCTGCCATTGTCCCTCTCACGTTCCCAGAGAGGTCATTCTTTTTGGTCCAACTCTTGCTGTCCTTTCTTACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR TCA 72 bp ACCAGAAGGGCTCCACTGAGGGTACAAATATTCAACTaGCTCCAATCGAGTGTCTTTGCTTGGTCACTTCCC +
Preference number: 3 (lower is better)
Translates to: TRRAPLRVQIFN*LQSSVFAWSLP
Trigger: GGGAAGTGACCAAGCAAAGACACTCGATTGGAGTCAGTTGAATATTTGTACCCTCAGTGGAGCCCTTCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR CAA 90 bp GTACTGGCATTAAGTGACAAAATGTGCAGCCTGTATTTGACTGAGGAGGAAAGGTCCACTCATCTGGCCTaGGGACAGCAGAAAACGAAG +
Preference number: 3 (lower is better)
Translates to: VLALSDKMCSLYLTEEERSTHLA*GQQKTK
Trigger: CTTCGTTTTCTGCTGTCCCAAGGCCAGATGAGTGGA...CCTTTCCTCCTCAGTCAAATACAGGCTGCACATTTTGTCACTTAATGCCAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR CAA 90 bp GACTCCAATCGAGTGTCTTTGCTTGGTCACTTCCCATGGTTATTCAGCTCAATCGCAAGAGAGAAAGCCTaGAGACTACAACTCCAGCAA +
Preference number: 3 (lower is better)
Translates to: DSNRVSLLGHFPWLFSSIAREKA*RLQLQQ
Trigger: TTGCTGGAGTTGTAGTCTCAAGGCTTTCTCTCTTGC...GATTGAGCTGAATAACCATGGGAAGTGACCAAGCAAAGACACTCGATTGGAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR CAA 90 bp AGTTGTAGAGCGGAGCTCCTTGTTCAAGCACCGGATAATGATGCCCCTGATTTTATCGAGTGTCTTTGCTaGGTCACTTCCCATGGTTAT +
Preference number: 3 (lower is better)
Translates to: SCRAELLVQAPDNDAPDFIECLC*VTSHGY
Trigger: ATAACCATGGGAAGTGACCAAGCAAAGACACTCGAT...AAAATCAGGGGCATCATTATCCGGTGCTTGAACAAGGAGCTCCGCTCTACAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR TCA 72 bp CTGCAGAAGTGGAAGAAAAGACCAGAAGGGCTCCACTaGGGGTACAAATATTCAACTGACTCCAATCGAGTG +
Preference number: 3 (lower is better)
Translates to: LQKWKKRPEGLH*GYKYSTDSNRV
Trigger: CACTCGATTGGAGTCAGTTGAATATTTGTACCCTCAGTGGAGCCCTTCTGGTCTTTTCTTCCACTTCTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR CCA 72 bp ACAACGAGCCTGCACCAGTCTAGCTACAGAACACTTTaGAATACTTGTCAGAGCGCACTGGCATCTGTTAAT +
Preference number: 3 (lower is better)
Translates to: TTSLHQSSYRTL*NTCQSALASVN
Trigger: ATTAACAGATGCCAGTGCGCTCTGACAAGTATTCCAAAGTGTTCTGTAGCTAGACTGGTGCAGGCTCGTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR CCA 72 bp GTCAGCAGGAAGGTTTCACGTAAGGTTATCCTTATGTaGAGAACATGGGTTATCCTGCTGTTCACGCCAGAT +
Preference number: 3 (lower is better)
Translates to: VSRKVSRKVILM*RTWVILLFTPD
Trigger: ATCTGGCGTGAACAGCAGGATAACCCATGTTCTCCACATAAGGATAACCTTACGTGAAACCTTCCTGCTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR CCA 72 bp GACTCCAATCGAGTGTCTTTGCTTGGTCACTTCCCATaGTTATTCAGCTCAATCTACAACTTCAGTCGTGGG +
Preference number: 3 (lower is better)
Translates to: DSNRVSLLGHFP*LFSSIYNFSRG
Trigger: CCCACGACTGAAGTTGTAGATTGAGCTGAATAACCATGGGAAGTGACCAAGCAAAGACACTCGATTGGAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR CAA 90 bp TTCTGGCAGCTGACTTCCTTCACTGAACAACTATTATCAAAAGGCGAGAGGCATTTACATATACAGCCTTaGTGGGGCCACAAACCCAGA +
Preference number: 3 (lower is better)
Translates to: FWQLTSFTEQLLSKGERHLHIQP*WGHKPR
Trigger: TCTGGGTTTGTGGCCCCACAAAGGCTGTATATGTAA...ATGCCTCTCGCCTTTTGATAATAGTTGTTCAGTGAAGGAAGTCAGCTGCCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR CCA 72 bp TTTATTGACAGCAGTCAGATGGTGATTCCACTCATCTaGCCTTGGGACAGCAGAAAACGAAGTGGAAGAACA +
Preference number: 3 (lower is better)
Translates to: FIDSSQMVIPLI*PWDSRKRSGRT
Trigger: TGTTCTTCCACTTCGTTTTCTGCTGTCCCAAGGCCAGATGAGTGGAATCACCATCTGACTGCTGTCAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR-3UTR CAA 90 bp TGCAGAAGTGGAAGAAAAGACCAGAAGGGCTCCACTGAGGGTACAAATATTCAAAACAAGAGCAAATGCTaGCAGATCACTGGCTTCTCA +
Preference number: 3 (lower is better)
Translates to: CRSGRKDQKGSTEGTNIQNKSKC*QITGFS
Trigger: TGAGAAGCCAGTGATCTGCAAGCATTTGCTCTTGTT...TTGAATATTTGTACCCTCAGTGGAGCCCTTCTGGTCTTTTCTTCCACTTCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR GCA 72 bp GGTACAAATATTCAACTGACTCCAATCGAGTGTCTTTaGTTGGTCACTTCCCATGGTTATTCAGCTCAATCT +
Preference number: 3 (lower is better)
Translates to: GTNIQLTPIECL*LVTSHGYSAQS
Trigger: AGATTGAGCTGAATAACCATGGGAAGTGACCAAGCAAAGACACTCGATTGGAGTCAGTTGAATATTTGTACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR GCA 72 bp GTTATCGCTCCTTCTCAGTCATTTTCTGAAACTCTTTaGTTGGCCTTGGCACCATTAGCAATTTTCACAACT +
Preference number: 3 (lower is better)
Translates to: VIAPSQSFSETL*LALAPLAIFTT
Trigger: AGTTGTGAAAATTGCTAATGGTGCCAAGGCCAAGCAAAGAGTTTCAGAAAATGACTGAGAAGGAGCGATAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR CCA 72 bp CCCATGGTTATTCAGCTCAATCTACAACTTCAGTCGTaGGAGTGCAGAACAAAACTTGAAACAAGTGCTTTT +
Preference number: 3 (lower is better)
Translates to: PMVIQLNLQLQS*ECRTKLETSAF
Trigger: AAAAGCACTTGTTTCAAGTTTTGTTCTGCACTCCCACGACTGAAGTTGTAGATTGAGCTGAATAACCATGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR TCA 90 bp CCGCCCTCACAGCATTCTAGGAACTACAGTAACGTCAGTCGGTTGCAGTGGTACCCCCAACGGGGTCAGTaGCCCGGCTGCGAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: PPSQHSRNYSNVSRLQWYPQRGQ*PGCEGQ
Trigger: CTGACCCTCGCAGCCGGGTCACTGACCCCGTTGGGG...GTACCACTGCAACCGACTGACGTTACTGTAGTTCCTAGAATGCTGTGAGGGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR CCA 90 bp GCTAGTCCTTTGGAAAGGCACCAGGCTTGGCAATTCAGGAAAGCCCAGGGCTGGTGTCCCCTTCCCAGCTaGGACAATGGATGGGTCGAA +
Preference number: 4 (lower is better)
Translates to: ASPLERHQAWQFRKAQGWCPLPS*DNGWVE
Trigger: TTCGACCCATCCATTGTCCCAGCTGGGAAGGGGACA...CCAGCCCTGGGCTTTCCTGAATTGCCAAGCCTGGTGCCTTTCCAAAGGACTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR TCA 90 bp GCTAGTCCTTTGGAAAGGCACCAGGCTTGGCAATTCAGGAAAGCCCAGGGCTGGTGGATGGGTCGAAGGTaGAGAGTCTCTGTTCACTGG +
Preference number: 4 (lower is better)
Translates to: ASPLERHQAWQFRKAQGWWMGRR*RVSVHW
Trigger: CCAGTGAACAGAGACTCTTCACCTTCGACCCATCCA...CCAGCCCTGGGCTTTCCTGAATTGCCAAGCCTGGTGCCTTTCCAAAGGACTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR CCA 90 bp CTGGCTCCACCACAGGCCCTGCTAGTCCTTTGGAAAGGCACCAGGCTTGGCAATAGCTGGGACAATGGATaGGTCGAAGGTGAAGAGTCT +
Preference number: 4 (lower is better)
Translates to: LAPPQALLVLWKGTRLGNSWDNG*VEGEES
Trigger: AGACTCTTCACCTTCGACCCATCCATTGTCCCAGCT...ATTGCCAAGCCTGGTGCCTTTCCAAAGGACTAGCAGGGCCTGTGGTGGAGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR CCA 90 bp ATCCTTTGGTTCAGACCCCATAACCACCACCTGGTACAGACTCCAAGGAAAAGCCTCCTGTGGTTCTGCTaGCTCCACCACAGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: ILWFRPHNHHLVQTPRKSLLWFC*LHHRPC
Trigger: GCAGGGCCTGTGGTGGAGCCAGCAGAACCACAGGAG...GCTTTTCCTTGGAGTCTGTACCAGGTGGTGGTTATGGGGTCTGAACCAAAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR TCA 90 bp CTGGCTCCACCACAGGCCCTGCTAGTCCTTTGGAAAGGCACCAGGCTTGGCAATCCAGAAGGGCTCCACTaGGGGTACAAATATTCAACT +
Preference number: 4 (lower is better)
Translates to: LAPPQALLVLWKGTRLGNPEGLH*GYKYST
Trigger: AGTTGAATATTTGTACCCTCAGTGGAGCCCTTCTGG...ATTGCCAAGCCTGGTGCCTTTCCAAAGGACTAGCAGGGCCTGTGGTGGAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR GCA 90 bp CTGGCTCCACCACAGGCCCTGCTAGTCCTTTGGAAAGGCACCAGGCTTGGCAATCTAGGTACGCCCTCTTaGTCATTCAATCTGTCCTGT +
Preference number: 4 (lower is better)
Translates to: LAPPQALLVLWKGTRLGNLGTPS*SFNLSC
Trigger: ACAGGACAGATTGAATGAGCAAGAGGGCGTACCTAG...ATTGCCAAGCCTGGTGCCTTTCCAAAGGACTAGCAGGGCCTGTGGTGGAGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR GCA 90 bp CCGCCCTCACAGCATTCTAGGAACTACAGTAACGTCAGTCGGTTGCAGTGGTACCCGCCGTCTCTCCTCTaGCAACTTTTGCTGTTGCAC +
Preference number: 4 (lower is better)
Translates to: PPSQHSRNYSNVSRLQWYPPSLL*QLLLLH
Trigger: GTGCAACAGCAAAAGTTGGCAGAGGAGAGACGGCGG...GTACCACTGCAACCGACTGACGTTACTGTAGTTCCTAGAATGCTGTGAGGGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR GCA 90 bp ATCCTTTGGTTCAGACCCCATAACCACCACCTGGTACAGACTCCAAGGAAAAGCACTCCTCTGAAGGGATaGAGGGCAGCACTCGCCTGG +
Preference number: 4 (lower is better)
Translates to: ILWFRPHNHHLVQTPRKSTPLKG*RAALAW
Trigger: CCAGGCGAGTGCTGCCCTGCATCCCTTCAGAGGAGT...GCTTTTCCTTGGAGTCTGTACCAGGTGGTGGTTATGGGGTCTGAACCAAAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR GCA 90 bp CTGGCTCCACCACAGGCCCTGCTAGTCCTTTGGAAAGGCACCAGGCTTGGCAATAGAAAGGATAAAAGCTaGCTCCAGAAGGTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: LAPPQALLVLWKGTRLGNRKDKS*LQKVAA
Trigger: TGCAGCCACCTTCTGGAGGCAGCTTTTATCCTTTCT...ATTGCCAAGCCTGGTGCCTTTCCAAAGGACTAGCAGGGCCTGTGGTGGAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR CCA 90 bp CCGCCCTCACAGCATTCTAGGAACTACAGTAACGTCAGTCGGTTGCAGTGGTACGTCAGTCGGTTGCAGTaGTACAACGAGCCTGCACCA +
Preference number: 4 (lower is better)
Translates to: PPSQHSRNYSNVSRLQWYVSRLQ*YNEPAP
Trigger: TGGTGCAGGCTCGTTGTACCACTGCAACCGACTGAC...GTACCACTGCAACCGACTGACGTTACTGTAGTTCCTAGAATGCTGTGAGGGCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR CCA 90 bp CTGGCTCCACCACAGGCCCTGCTAGTCCTTTGGAAAGGCACCAGGCTTGGCAATGCACTGCATCCTTTGTaGATGGATTTCCGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: LAPPQALLVLWKGTRLGNALHPL*MDFRCC
Trigger: ACAGCAACGGAAATCCATCCACAAAGGATGCAGTGC...ATTGCCAAGCCTGGTGCCTTTCCAAAGGACTAGCAGGGCCTGTGGTGGAGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR TCA 90 bp TTGGGGCACTGCATCCTTTGTGGATGGATTTCCGTTGCTGTGTTCCTCACAAGTCGCACACACAGGTTGTaGCTCTTACGGGCAGCATGG +
Preference number: 4 (lower is better)
Translates to: LGHCILCGWISVAVFLTSRTHRL*LLRAAW
Trigger: CCATGCTGCCCGTAAGAGTCACAACCTGTGTGTGCG...ACTTGTGAGGAACACAGCAACGGAAATCCATCCACAAAGGATGCAGTGCCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR GCA 90 bp TTCTGGCAGCTGACTTCCTTCACTGAACAACTATTATCAAAAGGCGAGAGGCATCAGGCGCCGCCATTTTaGCGCCGCCTCTACGCTCCT +
Preference number: 4 (lower is better)
Translates to: FWQLTSFTEQLLSKGERHQAPPF*RRLYAP
Trigger: AGGAGCGTAGAGGCGGCGGCAAAATGGCGGCGCCTG...ATGCCTCTCGCCTTTTGATAATAGTTGTTCAGTGAAGGAAGTCAGCTGCCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR GCA 90 bp CTGGCTCCACCACAGGCCCTGCTAGTCCTTTGGAAAGGCACCAGGCTTGGCAATGAACATGGGTTATCCTaGTGTTCACGCCAGATACAT +
Preference number: 4 (lower is better)
Translates to: LAPPQALLVLWKGTRLGNEHGLS*CSRQIH
Trigger: ATGTATCTGGCGTGAACAGCAGGATAACCCATGTTC...ATTGCCAAGCCTGGTGCCTTTCCAAAGGACTAGCAGGGCCTGTGGTGGAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR CCA 90 bp GAGCAAATGCTTGCAGATCACTGGCTTCTCAGTGTCTTCTCCCTCGCAGGTCTCGAAAGGCACCAGGCTTaGCAATTCAGGAAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: EQMLADHWLLSVFSLAGLERHQA*QFRKAQ
Trigger: CTGGGCTTTCCTGAATTGCCAAGCCTGGTGCCTTTC...GAGACCTGCGAGGGAGAAGACACTGAGAAGCCAGTGATCTGCAAGCATTTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR CCA 90 bp CTGGCTCCACCACAGGCCCTGCTAGTCCTTTGGAAAGGCACCAGGCTTGGCAATTGCATCCTTTGTGGATaGATTTCCGTTGCTGTGTTC +
Preference number: 4 (lower is better)
Translates to: LAPPQALLVLWKGTRLGNCILCG*ISVAVF
Trigger: GAACACAGCAACGGAAATCCATCCACAAAGGATGCA...ATTGCCAAGCCTGGTGCCTTTCCAAAGGACTAGCAGGGCCTGTGGTGGAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR CCA 90 bp GAGCAAATGCTTGCAGATCACTGGCTTCTCAGTGTCTTCTCCCTCGCAGGTCTCAGGCGCAGTACAAGTTaGGGCACTGCATCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: EQMLADHWLLSVFSLAGLRRSTS*GTASFV
Trigger: CACAAAGGATGCAGTGCCCCAACTTGTACTGCGCCT...GAGACCTGCGAGGGAGAAGACACTGAGAAGCCAGTGATCTGCAAGCATTTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR TCA 90 bp GCAGGAAGGTTTCACGTAAGGTTATCCTTATGTGGAGAACATGGGTTATCCTGCGAACTTCTGTGTGGCTaGGTCCGGCCTCCTGTAGCG +
Preference number: 4 (lower is better)
Translates to: AGRFHVRLSLCGEHGLSCELLCG*VRPPVA
Trigger: CGCTACAGGAGGCCGGACTCAGCCACACAGAAGTTC...GCAGGATAACCCATGTTCTCCACATAAGGATAACCTTACGTGAAACCTTCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR TCA 90 bp CCGCCCTCACAGCATTCTAGGAACTACAGTAACGTCAGTCGGTTGCAGTGGTACACAGCAGTCAGATGGTaGTTCCACTCATCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: PPSQHSRNYSNVSRLQWYTAVRW*FHSSGL
Trigger: AAGGCCAGATGAGTGGAATCACCATCTGACTGCTGT...GTACCACTGCAACCGACTGACGTTACTGTAGTTCCTAGAATGCTGTGAGGGCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR TCA 90 bp GCTAGTCCTTTGGAAAGGCACCAGGCTTGGCAATTCAGGAAAGCCCAGGGCTGGTGTGCAGCCTGTATTTaGCTGAGGAGGAAAGGAAAT +
Preference number: 4 (lower is better)
Translates to: ASPLERHQAWQFRKAQGWCAACI*LRRKGN
Trigger: ATTTCCTTTCCTCCTCAGTCAAATACAGGCTGCACA...CCAGCCCTGGGCTTTCCTGAATTGCCAAGCCTGGTGCCTTTCCAAAGGACTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR GCA 90 bp AGTTGTAGAGCGGAGCTCCTTGTTCAAGCACCGGATAATGATGCCCCTGATTTTTCACTGGAAGGTGCGTaGACAGAGGCCACAGGAAGG +
Preference number: 4 (lower is better)
Translates to: SCRAELLVQAPDNDAPDFSLEGA*TEATGR
Trigger: CCTTCCTGTGGCCTCTGTGCACGCACCTTCCAGTGA...AAAATCAGGGGCATCATTATCCGGTGCTTGAACAAGGAGCTCCGCTCTACAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR GCA 90 bp GCAGGAAGGTTTCACGTAAGGTTATCCTTATGTGGAGAACATGGGTTATCCTGCACTCTCCTGTGGTTCTaGTGGCTCCACCACAGGCCC +
Preference number: 4 (lower is better)
Translates to: AGRFHVRLSLCGEHGLSCTLLWF*WLHHRP
Trigger: GGGCCTGTGGTGGAGCCAGCAGAACCACAGGAGAGT...GCAGGATAACCCATGTTCTCCACATAAGGATAACCTTACGTGAAACCTTCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR CCA 90 bp TGCAGAAGTGGAAGAAAAGACCAGAAGGGCTCCACTGAGGGTACAAATATTCAAAGGCCACAGGAAGGGTaGGCTTGCCAAGCGGGTACG +
Preference number: 4 (lower is better)
Translates to: CRSGRKDQKGSTEGTNIQRPQEG*ACQAGT
Trigger: CGTACCCGCTTGGCAAGCCCACCCTTCCTGTGGCCT...TTGAATATTTGTACCCTCAGTGGAGCCCTTCTGGTCTTTTCTTCCACTTCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR CCA 90 bp GAGCAAATGCTTGCAGATCACTGGCTTCTCAGTGTCTTCTCCCTCGCAGGTCTCCCACTCATCTGGCCTTaGGACAGCAGAAAACGAAGT +
Preference number: 4 (lower is better)
Translates to: EQMLADHWLLSVFSLAGLPLIWP*DSRKRS
Trigger: ACTTCGTTTTCTGCTGTCCCAAGGCCAGATGAGTGG...GAGACCTGCGAGGGAGAAGACACTGAGAAGCCAGTGATCTGCAAGCATTTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR GCA 90 bp GAGCAAATGCTTGCAGATCACTGGCTTCTCAGTGTCTTCTCCCTCGCAGGTCTCACATCTCTGCTTCTCTaGTCTGTGCTTTCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: EQMLADHWLLSVFSLAGLTSLLL*SVLSLP
Trigger: GGGAAGAGAAAGCACAGAGCAGAGAAGCAGAGATGT...GAGACCTGCGAGGGAGAAGACACTGAGAAGCCAGTGATCTGCAAGCATTTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR GCA 90 bp ATCCTTTGGTTCAGACCCCATAACCACCACCTGGTACAGACTCCAAGGAAAAGCGTAACGTCAGTCGGTTaGAGTGGTACAACGAGCCTG +
Preference number: 4 (lower is better)
Translates to: ILWFRPHNHHLVQTPRKSVTSVG*SGTTSL
Trigger: CAGGCTCGTTGTACCACTGCAACCGACTGACGTTAC...GCTTTTCCTTGGAGTCTGTACCAGGTGGTGGTTATGGGGTCTGAACCAAAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR GCA 90 bp CCGCCCTCACAGCATTCTAGGAACTACAGTAACGTCAGTCGGTTGCAGTGGTACCCAATCGAGTGTCTTTaGTTGGTCACTTCCCATGGT +
Preference number: 4 (lower is better)
Translates to: PPSQHSRNYSNVSRLQWYPIECL*LVTSHG
Trigger: ACCATGGGAAGTGACCAAGCAAAGACACTCGATTGG...GTACCACTGCAACCGACTGACGTTACTGTAGTTCCTAGAATGCTGTGAGGGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR GCA 90 bp GAGCAAATGCTTGCAGATCACTGGCTTCTCAGTGTCTTCTCCCTCGCAGGTCTCTGGATGGATTTCCGTTaGTGTGTTCCTCACAAGTCC +
Preference number: 4 (lower is better)
Translates to: EQMLADHWLLSVFSLAGLWMDFR*CVPHKS
Trigger: GGACTTGTGAGGAACACAGCAACGGAAATCCATCCA...GAGACCTGCGAGGGAGAAGACACTGAGAAGCCAGTGATCTGCAAGCATTTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR CCA 90 bp CCGCCCTCACAGCATTCTAGGAACTACAGTAACGTCAGTCGGTTGCAGTGGTACATTTCTTTTAGGGACTaGGGTAGGAGGGGACAGGAA +
Preference number: 4 (lower is better)
Translates to: PPSQHSRNYSNVSRLQWYISFRD*GRRGQE
Trigger: TTCCTGTCCCCTCCTACCCCAGTCCCTAAAAGAAAT...GTACCACTGCAACCGACTGACGTTACTGTAGTTCCTAGAATGCTGTGAGGGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR CCA 90 bp GCTAGTCCTTTGGAAAGGCACCAGGCTTGGCAATTCAGGAAAGCCCAGGGCTGGAAGGACAGCAAGAGTTaGACCAAAAAGAATGACCTC +
Preference number: 4 (lower is better)
Translates to: ASPLERHQAWQFRKAQGWKDSKS*TKKNDL
Trigger: GAGGTCATTCTTTTTGGTCCAACTCTTGCTGTCCTT...CCAGCCCTGGGCTTTCCTGAATTGCCAAGCCTGGTGCCTTTCCAAAGGACTAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR CCA 90 bp CCGCCCTCACAGCATTCTAGGAACTACAGTAACGTCAGTCGGTTGCAGTGGTACATAGATTACACAGGCTaGGAGTTCTGTCTTGGCTCC +
Preference number: 4 (lower is better)
Translates to: PPSQHSRNYSNVSRLQWYIDYTG*EFCLGS
Trigger: GGAGCCAAGACAGAACTCCCAGCCTGTGTAATCTAT...GTACCACTGCAACCGACTGACGTTACTGTAGTTCCTAGAATGCTGTGAGGGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR GCA 90 bp GCAGGAAGGTTTCACGTAAGGTTATCCTTATGTGGAGAACATGGGTTATCCTGCCAGGAAGGGTGGGCTTaGCAAGCGGGTACGTTTGTT +
Preference number: 4 (lower is better)
Translates to: AGRFHVRLSLCGEHGLSCQEGWA*QAGTFV
Trigger: AACAAACGTACCCGCTTGGCAAGCCCACCCTTCCTG...GCAGGATAACCCATGTTCTCCACATAAGGATAACCTTACGTGAAACCTTCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR GCA 90 bp CCGCCCTCACAGCATTCTAGGAACTACAGTAACGTCAGTCGGTTGCAGTGGTACTGTTCTAGACAGCTATaGCAAGGCCACTGGGAATTT +
Preference number: 4 (lower is better)
Translates to: PPSQHSRNYSNVSRLQWYCSRQL*QGHWEF
Trigger: AAATTCCCAGTGGCCTTGGCATAGCTGTCTAGAACA...GTACCACTGCAACCGACTGACGTTACTGTAGTTCCTAGAATGCTGTGAGGGCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR CCA 90 bp CTGGCTCCACCACAGGCCCTGCTAGTCCTTTGGAAAGGCACCAGGCTTGGCAATGAGAATAAGAAGTCGTaGATTACTGTTAGAGACTGT +
Preference number: 4 (lower is better)
Translates to: LAPPQALLVLWKGTRLGNENKKS*ITVRDC
Trigger: ACAGTCTCTAACAGTAATCCACGACTTCTTATTCTC...ATTGCCAAGCCTGGTGCCTTTCCAAAGGACTAGCAGGGCCTGTGGTGGAGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR CCA 90 bp GTACTGGCATTAAGTGACAAAATGTGCAGCCTGTATTTGACTGAGGAGGAAAGGGCCCTGCTAGTCCTTTaGAAAGGCACCAGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: VLALSDKMCSLYLTEEERALLVL*KGTRLG
Trigger: GCCAAGCCTGGTGCCTTTCCAAAGGACTAGCAGGGC...CCTTTCCTCCTCAGTCAAATACAGGCTGCACATTTTGTCACTTAATGCCAGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR CAA 72 bp TATTCAGGCGCAGTACAAGTTGGGGCACTGCATCCTTaGTGGATGGATTTCCGTTGCTGTGTTCCTCACAAG +
Preference number: 4 (lower is better)
Translates to: YSGAVQVGALHP*WMDFRCCVPHK
Trigger: CTTGTGAGGAACACAGCAACGGAAATCCATCCACAAAGGATGCAGTGCCCCAACTTGTACTGCGCCTGAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR TCA 90 bp CCGCCCTCACAGCATTCTAGGAACTACAGTAACGTCAGTCGGTTGCAGTGGTACAAAAGAGTGCATAAATaGAACAATGTCCCCAACGGG +
Preference number: 4 (lower is better)
Translates to: PPSQHSRNYSNVSRLQWYKRVHK*NNVPNG
Trigger: CCCGTTGGGGACATTGTTTCATTTATGCACTCTTTT...GTACCACTGCAACCGACTGACGTTACTGTAGTTCCTAGAATGCTGTGAGGGCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR TCA 90 bp CTGACTCCAATCGAGTGTCTTTGCTTGGTCACTTCCCATGGTTATTCAGCTCAAACCTCTCTGGGAACGTaGGAGGGACAATGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: LTPIECLCLVTSHGYSAQTSLGT*EGQWQK
Trigger: TTTCTGCCATTGTCCCTCTCACGTTCCCAGAGAGGT...TTGAGCTGAATAACCATGGGAAGTGACCAAGCAAAGACACTCGATTGGAGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR CCA 90 bp GCAGGAAGGTTTCACGTAAGGTTATCCTTATGTGGAGAACATGGGTTATCCTGCCTATGCCAAGGCCACTaGGAATTTCTCAGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: AGRFHVRLSLCGEHGLSCLCQGH*EFLRLS
Trigger: GGAGAGCCTGAGAAATTCCCAGTGGCCTTGGCATAG...GCAGGATAACCCATGTTCTCCACATAAGGATAACCTTACGTGAAACCTTCCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR GCA 90 bp TTGGGGCACTGCATCCTTTGTGGATGGATTTCCGTTGCTGTGTTCCTCACAAGTCCTCCAGAAGGTGGCTaGATCAGAAATGAAAATGTG +
Preference number: 4 (lower is better)
Translates to: LGHCILCGWISVAVFLTSPPEGG*IRNENV
Trigger: CACATTTTCATTTCTGATGCAGCCACCTTCTGGAGG...ACTTGTGAGGAACACAGCAACGGAAATCCATCCACAAAGGATGCAGTGCCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR GCA 90 bp GCAGGAAGGTTTCACGTAAGGTTATCCTTATGTGGAGAACATGGGTTATCCTGCGTGGTACAACGAGCCTaGACCAGTCTAGCTACAGAA +
Preference number: 4 (lower is better)
Translates to: AGRFHVRLSLCGEHGLSCVVQRA*TSLATE
Trigger: TTCTGTAGCTAGACTGGTGCAGGCTCGTTGTACCAC...GCAGGATAACCCATGTTCTCCACATAAGGATAACCTTACGTGAAACCTTCCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR GCA 90 bp TTCTGGCAGCTGACTTCCTTCACTGAACAACTATTATCAAAAGGCGAGAGGCATTGGGGTGCCTTACTCTaGCATGTGGGATTTACCCCA +
Preference number: 4 (lower is better)
Translates to: FWQLTSFTEQLLSKGERHWGALL*HVGFTP
Trigger: TGGGGTAAATCCCACATGGCAGAGTAAGGCACCCCA...ATGCCTCTCGCCTTTTGATAATAGTTGTTCAGTGAAGGAAGTCAGCTGCCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR CCA 90 bp TTGGGGCACTGCATCCTTTGTGGATGGATTTCCGTTGCTGTGTTCCTCACAAGTCAGCAGAAAACGAAGTaGAAGAACAATAGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: LGHCILCGWISVAVFLTSQQKTK*KNNSWP
Trigger: TGGCCAGCTATTGTTCTTCCACTTCGTTTTCTGCTG...ACTTGTGAGGAACACAGCAACGGAAATCCATCCACAAAGGATGCAGTGCCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR TCA 90 bp TTCTGGCAGCTGACTTCCTTCACTGAACAACTATTATCAAAAGGCGAGAGGCATATGCCAGTGAGATCCTaGAACTGCAGCAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: FWQLTSFTEQLLSKGERHMPVRS*NCSSFS
Trigger: AGAGAAGCTGCTGCAGTTTCAGGATCTCACTGGCAT...ATGCCTCTCGCCTTTTGATAATAGTTGTTCAGTGAAGGAAGTCAGCTGCCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR TCA 90 bp CTGACTCCAATCGAGTGTCTTTGCTTGGTCACTTCCCATGGTTATTCAGCTCAAGGCATGTGCTTCCGGTaGATCCTCTTGAAACCTAAA +
Preference number: 4 (lower is better)
Translates to: LTPIECLCLVTSHGYSAQGMCFR*ILLKPK
Trigger: TTTAGGTTTCAAGAGGATTCACCGGAAGCACATGCC...TTGAGCTGAATAACCATGGGAAGTGACCAAGCAAAGACACTCGATTGGAGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR TCA 90 bp GACTCCAATCGAGTGTCTTTGCTTGGTCACTTCCCATGGTTATTCAGCTCAATCCAGCCTGTATTTGACTaGGGAGGAAAGGAAATGGCA +
Preference number: 4 (lower is better)
Translates to: DSNRVSLLGHFPWLFSSIQPVFD*GGKEMA
Trigger: TGCCATTTCCTTTCCTCCTCAGTCAAATACAGGCTG...GATTGAGCTGAATAACCATGGGAAGTGACCAAGCAAAGACACTCGATTGGAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR TCA 90 bp GAGCAAATGCTTGCAGATCACTGGCTTCTCAGTGTCTTCTCCCTCGCAGGTCTCGTACAAATATTCAACTaGCTCCAATCGAGTGTCTTT +
Preference number: 4 (lower is better)
Translates to: EQMLADHWLLSVFSLAGLVQIFN*LQSSVF
Trigger: AAAGACACTCGATTGGAGTCAGTTGAATATTTGTAC...GAGACCTGCGAGGGAGAAGACACTGAGAAGCCAGTGATCTGCAAGCATTTGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR GCA 90 bp AAGTCCTTAGGAGTAACACAGATTGTACTGGCATTAAGTGACAAAATGTGCAGCTCCTCCTGTAAATTCTaGCGCCGTCTCTCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: KSLGVTQIVLALSDKMCSSSCKF*RRLSSA
Trigger: GGCAGAGGAGAGACGGCGGCAGAATTTACAGGAGGA...GCTGCACATTTTGTCACTTAATGCCAGTACAATCTGTGTTACTCCTAAGGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR GCA 90 bp AGTTGTAGAGCGGAGCTCCTTGTTCAAGCACCGGATAATGATGCCCCTGATTTTGTGGAAAAATTCCTCTaGATGGTTGTCAGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: SCRAELLVQAPDNDAPDFVEKFL*MVVSRK
Trigger: CTTCCTGCTGACAACCATGCAGAGGAATTTTTCCAC...AAAATCAGGGGCATCATTATCCGGTGCTTGAACAAGGAGCTCCGCTCTACAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR GCA 90 bp CCGCCCTCACAGCATTCTAGGAACTACAGTAACGTCAGTCGGTTGCAGTGGTACTTAAGTGACAAAATGTaGAGCCTGTATTTGACTGAG +
Preference number: 4 (lower is better)
Translates to: PPSQHSRNYSNVSRLQWYLSDKM*SLYLTE
Trigger: CTCAGTCAAATACAGGCTGCACATTTTGTCACTTAA...GTACCACTGCAACCGACTGACGTTACTGTAGTTCCTAGAATGCTGTGAGGGCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR GCA 90 bp AGTTGTAGAGCGGAGCTCCTTGTTCAAGCACCGGATAATGATGCCCCTGATTTTGGAAACAAGAGCAAATaGTTGCAGATCACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: SCRAELLVQAPDNDAPDFGNKSK*LQITGF
Trigger: GAAGCCAGTGATCTGCAAGCATTTGCTCTTGTTTCC...AAAATCAGGGGCATCATTATCCGGTGCTTGAACAAGGAGCTCCGCTCTACAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR CCA 90 bp GGTCTCATCAAAATCCCAAAAGTCCTTAGGAGTAACACAGATTGTACTGGCATTTCCCACTGCTCCAAGTaGGGTGCACAGGTGGTAAGA +
Preference number: 4 (lower is better)
Translates to: GLIKIPKVLRSNTDCTGISHCSK*GAQVVR
Trigger: TCTTACCACCTGTGCACCCCACTTGGAGCAGTGGGA...AATGCCAGTACAATCTGTGTTACTCCTAAGGACTTTTGGGATTTTGATGAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR CCA 90 bp GACTCCAATCGAGTGTCTTTGCTTGGTCACTTCCCATGGTTATTCAGCTCAATCCTTGTCAGAGCGCACTaGCATCTGTTAATACATGGC +
Preference number: 4 (lower is better)
Translates to: DSNRVSLLGHFPWLFSSILVRAH*HLLIHG
Trigger: GCCATGTATTAACAGATGCCAGTGCGCTCTGACAAG...GATTGAGCTGAATAACCATGGGAAGTGACCAAGCAAAGACACTCGATTGGAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR CCA 90 bp TCAGTGTCTTCTCCCTCGCAGGTCTCATCAAAATCCCAAAAGTCCTTAGGAGTACCTTACTCTGCCATGTaGGATTTACCCCAACAACTG +
Preference number: 4 (lower is better)
Translates to: SVSSPSQVSSKSQKSLGVPYSAM*DLPQQL
Trigger: CAGTTGTTGGGGTAAATCCCACATGGCAGAGTAAGG...TACTCCTAAGGACTTTTGGGATTTTGATGAGACCTGCGAGGGAGAAGACACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR CCA 90 bp TCAGTGTCTTCTCCCTCGCAGGTCTCATCAAAATCCCAAAAGTCCTTAGGAGTAATGCTTGCAGATCACTaGCTTCTCAGTGTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SVSSPSQVSSKSQKSLGVMLADH*LLSVFS
Trigger: GGAGAAGACACTGAGAAGCCAGTGATCTGCAAGCAT...TACTCCTAAGGACTTTTGGGATTTTGATGAGACCTGCGAGGGAGAAGACACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR CCA 90 bp ATCCTTTGGTTCAGACCCCATAACCACCACCTGGTACAGACTCCAAGGAAAAGCCTACAACTTCAGTCGTaGGAGTGCAGAACAAAACTT +
Preference number: 4 (lower is better)
Translates to: ILWFRPHNHHLVQTPRKSLQLQS*ECRTKL
Trigger: AAGTTTTGTTCTGCACTCCCACGACTGAAGTTGTAG...GCTTTTCCTTGGAGTCTGTACCAGGTGGTGGTTATGGGGTCTGAACCAAAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR CAA 72 bp TCCTTGTTCAAGCACCGGATAATGATGCCCCTGATTTaGCATTCTGGGGGTTATCGCTCCTTCTCAGTCATT +
Preference number: 4 (lower is better)
Translates to: SLFKHRIMMPLI*HSGGYRSFSVI
Trigger: AATGACTGAGAAGGAGCGATAACCCCCAGAATGCAAAATCAGGGGCATCATTATCCGGTGCTTGAACAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR TCA 90 bp TGCAGAAGTGGAAGAAAAGACCAGAAGGGCTCCACTGAGGGTACAAATATTCAAAAGGTATGGCGACACTaGTCCATAGATTCGATGCCA +
Preference number: 4 (lower is better)
Translates to: CRSGRKDQKGSTEGTNIQKVWRH*SIDSMP
Trigger: TGGCATCGAATCTATGGATCAGTGTCGCCATACCTT...TTGAATATTTGTACCCTCAGTGGAGCCCTTCTGGTCTTTTCTTCCACTTCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR TCA 90 bp TGCAGAAGTGGAAGAAAAGACCAGAAGGGCTCCACTGAGGGTACAAATATTCAACAAGAGAGAAAGCCTTaGGACTACAACTCCAGCAAG +
Preference number: 4 (lower is better)
Translates to: CRSGRKDQKGSTEGTNIQQERKP*DYNSSK
Trigger: CTTGCTGGAGTTGTAGTCTCAAGGCTTTCTCTCTTG...TTGAATATTTGTACCCTCAGTGGAGCCCTTCTGGTCTTTTCTTCCACTTCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR TCA 90 bp GACTCCAATCGAGTGTCTTTGCTTGGTCACTTCCCATGGTTATTCAGCTCAATCATTTACCCCAACAACTaGGGACTGCAGTGGATAGTA +
Preference number: 4 (lower is better)
Translates to: DSNRVSLLGHFPWLFSSIIYPNN*GLQWIV
Trigger: TACTATCCACTGCAGTCCTCAGTTGTTGGGGTAAAT...GATTGAGCTGAATAACCATGGGAAGTGACCAAGCAAAGACACTCGATTGGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR CCA 90 bp GCAGGAAGGTTTCACGTAAGGTTATCCTTATGTGGAGAACATGGGTTATCCTGCCTTATGTGGAGAACATaGGTTATCCTGCTGTTCACG +
Preference number: 4 (lower is better)
Translates to: AGRFHVRLSLCGEHGLSCLMWRT*VILLFT
Trigger: CGTGAACAGCAGGATAACCCATGTTCTCCACATAAG...GCAGGATAACCCATGTTCTCCACATAAGGATAACCTTACGTGAAACCTTCCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR CCA 90 bp TTGGGGCACTGCATCCTTTGTGGATGGATTTCCGTTGCTGTGTTCCTCACAAGTAAGGTTATCCTTATGTaGAGAACATGGGTTATCCTG +
Preference number: 4 (lower is better)
Translates to: LGHCILCGWISVAVFLTSKVILM*RTWVIL
Trigger: CAGGATAACCCATGTTCTCCACATAAGGATAACCTT...ACTTGTGAGGAACACAGCAACGGAAATCCATCCACAAAGGATGCAGTGCCCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR CCA 90 bp GTACTGGCATTAAGTGACAAAATGTGCAGCCTGTATTTGACTGAGGAGGAAAGGCCTGATTTTGCATTCTaGGGGTTATCGCTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: VLALSDKMCSLYLTEEERPDFAF*GLSLLL
Trigger: GAGAAGGAGCGATAACCCCCAGAATGCAAAATCAGG...CCTTTCCTCCTCAGTCAAATACAGGCTGCACATTTTGTCACTTAATGCCAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR TCA 90 bp GCAGGAAGGTTTCACGTAAGGTTATCCTTATGTGGAGAACATGGGTTATCCTGCTCGTCAGTTAGGTCCTaGACAAAAAGAACTTCTGTG +
Preference number: 4 (lower is better)
Translates to: AGRFHVRLSLCGEHGLSCSSVRS*TKRTSV
Trigger: CACAGAAGTTCTTTTTGTTCAGGACCTAACTGACGA...GCAGGATAACCCATGTTCTCCACATAAGGATAACCTTACGTGAAACCTTCCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR TCA 90 bp AAGTCCTTAGGAGTAACACAGATTGTACTGGCATTAAGTGACAAAATGTGCAGCATAATACACTTCCACTaGGACAGGCAGGGCACTCTC +
Preference number: 4 (lower is better)
Translates to: KSLGVTQIVLALSDKMCSIIHFH*DRQGTL
Trigger: GAGAGTGCCCTGCCTGTCTCAGTGGAAGTGTATTAT...GCTGCACATTTTGTCACTTAATGCCAGTACAATCTGTGTTACTCCTAAGGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR TCA 90 bp ACAATGGCAGAAATAAGCACAAACCAGCCCGGGGCACTTTTATTACACTATTGTTGGGGAGGAAGGCTCTaGCTTAAGTGGAAAAATTCC +
Preference number: 4 (lower is better)
Translates to: TMAEISTNQPGALLLHYCWGGRL*LKWKNS
Trigger: GGAATTTTTCCACTTAAGTCAGAGCCTTCCTCCCCA...ACAATAGTGTAATAAAAGTGCCCCGGGCTGGTTTGTGCTTATTTCTGCCATTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR TCA 90 bp GACTCCAATCGAGTGTCTTTGCTTGGTCACTTCCCATGGTTATTCAGCTCAATCTTTGGAAACAACAGCTaGAATATCCCAGAGGTGATG +
Preference number: 4 (lower is better)
Translates to: DSNRVSLLGHFPWLFSSIFGNNS*NIPEVM
Trigger: CATCACCTCTGGGATATTTCAGCTGTTGTTTCCAAA...GATTGAGCTGAATAACCATGGGAAGTGACCAAGCAAAGACACTCGATTGGAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR GCA 90 bp TTCTGGCAGCTGACTTCCTTCACTGAACAACTATTATCAAAAGGCGAGAGGCATTACAAGTTGGGGCACTaGATCCTTTGTGGATGGATT +
Preference number: 4 (lower is better)
Translates to: FWQLTSFTEQLLSKGERHYKLGH*ILCGWI
Trigger: AATCCATCCACAAAGGATGCAGTGCCCCAACTTGTA...ATGCCTCTCGCCTTTTGATAATAGTTGTTCAGTGAAGGAAGTCAGCTGCCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR CCA 90 bp TGCAGAAGTGGAAGAAAAGACCAGAAGGGCTCCACTGAGGGTACAAATATTCAATTTATTACACTATTGTaGGCTAAGGAGCCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: CRSGRKDQKGSTEGTNIQFITLL*AKEPRA
Trigger: TGCCCTGGGCTCCTTAGCCCACAATAGTGTAATAAA...TTGAATATTTGTACCCTCAGTGGAGCCCTTCTGGTCTTTTCTTCCACTTCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR CCA 90 bp GTACTGGCATTAAGTGACAAAATGTGCAGCCTGTATTTGACTGAGGAGGAAAGGGCATCTGTTAATACATaGCCTGACCCATGTACCCAT +
Preference number: 4 (lower is better)
Translates to: VLALSDKMCSLYLTEEERASVNT*PDPCTH
Trigger: ATGGGTACATGGGTCAGGCCATGTATTAACAGATGC...CCTTTCCTCCTCAGTCAAATACAGGCTGCACATTTTGTCACTTAATGCCAGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR CCA 90 bp GCAGGAAGGTTTCACGTAAGGTTATCCTTATGTGGAGAACATGGGTTATCCTGCAGCTACAGAACACTTTaGAATACTTGTCAGAGCGCA +
Preference number: 4 (lower is better)
Translates to: AGRFHVRLSLCGEHGLSCSYRTL*NTCQSA
Trigger: TGCGCTCTGACAAGTATTCCAAAGTGTTCTGTAGCT...GCAGGATAACCCATGTTCTCCACATAAGGATAACCTTACGTGAAACCTTCCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR CCA 90 bp AAGTCCTTAGGAGTAACACAGATTGTACTGGCATTAAGTGACAAAATGTGCAGCTTCCCCAAAGAGGTGTaGACAGTGTACCTAGCCTCA +
Preference number: 4 (lower is better)
Translates to: KSLGVTQIVLALSDKMCSFPKEV*TVYLAS
Trigger: TGAGGCTAGGTACACTGTCCACACCTCTTTGGGGAA...GCTGCACATTTTGTCACTTAATGCCAGTACAATCTGTGTTACTCCTAAGGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR CAA 72 bp GTAAATTATCACATGACTATTCAGGCGCAGTACAAGTaGGGGCACTGCATCCTTTGTGGATGGATTTCCGTT +
Preference number: 4 (lower is better)
Translates to: VNYHMTIQAQYK*GHCILCGWISV
Trigger: AACGGAAATCCATCCACAAAGGATGCAGTGCCCCAACTTGTACTGCGCCTGAATAGTCATGTGATAATTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR TCA 90 bp GGTCTCATCAAAATCCCAAAAGTCCTTAGGAGTAACACAGATTGTACTGGCATTTTGGACCAAAAAGAATaGCCTCTCTGGGAACGTGAG +
Preference number: 4 (lower is better)
Translates to: GLIKIPKVLRSNTDCTGILDQKE*PLWERE
Trigger: CTCACGTTCCCAGAGAGGTCATTCTTTTTGGTCCAA...AATGCCAGTACAATCTGTGTTACTCCTAAGGACTTTTGGGATTTTGATGAGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR TCA 90 bp GACTCCAATCGAGTGTCTTTGCTTGGTCACTTCCCATGGTTATTCAGCTCAATCGCTGACTTCCTTCACTaGACAACTATTATCAAAAGG +
Preference number: 4 (lower is better)
Translates to: DSNRVSLLGHFPWLFSSIADFLH*TTIIKR
Trigger: CCTTTTGATAATAGTTGTTCAGTGAAGGAAGTCAGC...GATTGAGCTGAATAACCATGGGAAGTGACCAAGCAAAGACACTCGATTGGAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR TCA 90 bp TTCTGGCAGCTGACTTCCTTCACTGAACAACTATTATCAAAAGGCGAGAGGCATTGTACTGGCATTAAGTaGCAAAATGTGCAGCCTGTA +
Preference number: 4 (lower is better)
Translates to: FWQLTSFTEQLLSKGERHCTGIK*QNVQPV
Trigger: TACAGGCTGCACATTTTGTCACTTAATGCCAGTACA...ATGCCTCTCGCCTTTTGATAATAGTTGTTCAGTGAAGGAAGTCAGCTGCCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR GCA 90 bp GTACTGGCATTAAGTGACAAAATGTGCAGCCTGTATTTGACTGAGGAGGAAAGGCTTCAGTCGTGGGAGTaGAGAACAAAACTTGAAACA +
Preference number: 4 (lower is better)
Translates to: VLALSDKMCSLYLTEEERLQSWE*RTKLET
Trigger: TGTTTCAAGTTTTGTTCTGCACTCCCACGACTGAAG...CCTTTCCTCCTCAGTCAAATACAGGCTGCACATTTTGTCACTTAATGCCAGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR CCA 90 bp TGCAGAAGTGGAAGAAAAGACCAGAAGGGCTCCACTGAGGGTACAAATATTCAACTTGGTCACTTCCCATaGTTATTCAGCTCAATCTAC +
Preference number: 4 (lower is better)
Translates to: CRSGRKDQKGSTEGTNIQLGHFP*LFSSIY
Trigger: GTAGATTGAGCTGAATAACCATGGGAAGTGACCAAG...TTGAATATTTGTACCCTCAGTGGAGCCCTTCTGGTCTTTTCTTCCACTTCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR CCA 90 bp CTGACTCCAATCGAGTGTCTTTGCTTGGTCACTTCCCATGGTTATTCAGCTCAACTTATTCAAATATCATaGTGGAGGCAAGCAAGGAGA +
Preference number: 4 (lower is better)
Translates to: LTPIECLCLVTSHGYSAQLIQIS*WRQARR
Trigger: TCTCCTTGCTTGCCTCCACCATGATATTTGAATAAG...TTGAGCTGAATAACCATGGGAAGTGACCAAGCAAAGACACTCGATTGGAGTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR CAA 72 bp GGGTACAAATATTCAACTGACTCCAATCGAGTGTCTTaGCTTGGTCACTTCCCATGGTTATTCAGCTCAATC +
Preference number: 4 (lower is better)
Translates to: GYKYSTDSNRVS*LGHFPWLFSSI
Trigger: GATTGAGCTGAATAACCATGGGAAGTGACCAAGCAAAGACACTCGATTGGAGTCAGTTGAATATTTGTACCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR TCA 90 bp GGTCTCATCAAAATCCCAAAAGTCCTTAGGAGTAACACAGATTGTACTGGCATTATGTCAGAAGAGGAATaGAGAGCTGCTATCCTTTGG +
Preference number: 4 (lower is better)
Translates to: GLIKIPKVLRSNTDCTGIMSEEE*RAAILW
Trigger: CCAAAGGATAGCAGCTCTTCATTCCTCTTCTGACAT...AATGCCAGTACAATCTGTGTTACTCCTAAGGACTTTTGGGATTTTGATGAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR GCA 90 bp ACAATGGCAGAAATAAGCACAAACCAGCCCGGGGCACTTTTATTACACTATTGTTTTTCTGAAACTCTTTaGTTGGCCTTGGCACCATTA +
Preference number: 4 (lower is better)
Translates to: TMAEISTNQPGALLLHYCFSETL*LALAPL
Trigger: TAATGGTGCCAAGGCCAAGCAAAGAGTTTCAGAAAA...ACAATAGTGTAATAAAAGTGCCCCGGGCTGGTTTGTGCTTATTTCTGCCATTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR CCA 90 bp GGTCTCATCAAAATCCCAAAAGTCCTTAGGAGTAACACAGATTGTACTGGCATTTCGAGTGTCTTTGCTTaGTCACTTCCCATGGTTATT +
Preference number: 4 (lower is better)
Translates to: GLIKIPKVLRSNTDCTGISSVFA*SLPMVI
Trigger: AATAACCATGGGAAGTGACCAAGCAAAGACACTCGA...AATGCCAGTACAATCTGTGTTACTCCTAAGGACTTTTGGGATTTTGATGAGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261942.7
3UTR CAA 72 bp ACAAATATTCAACTGACTCCAATCGAGTGTCTTTGCTaGGTCACTTCCCATGGTTATTCAGCTCAATCTACA +
Preference number: 4 (lower is better)
Translates to: TNIQLTPIECLC*VTSHGYSAQST
Trigger: TGTAGATTGAGCTGAATAACCATGGGAAGTGACCAAGCAAAGACACTCGATTGGAGTCAGTTGAATATTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR CCA 90 bp GGTCTCATCAAAATCCCAAAAGTCCTTAGGAGTAACACAGATTGTACTGGCATTACAAGTGTTATCCTCTaGCCATCTCTTATTCAAATA +
Preference number: 4 (lower is better)
Translates to: GLIKIPKVLRSNTDCTGITSVIL*PSLIQI
Trigger: TATTTGAATAAGAGATGGCCAGAGGATAACACTTGT...AATGCCAGTACAATCTGTGTTACTCCTAAGGACTTTTGGGATTTTGATGAGACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS CCA 90 bp TTGCAGGAAGATCTGGACTCGGCTCCCCGGATCCTCGACCATTCATaGCGCCCCCAGTCGTCCGCACAGCTTGCCGTCCACCGCCGTGAC +
Preference number: 5 (lower is better)
Translates to: LQEDLDSAPRILDHS*RPQSSAQLAVHRRD
Trigger: GTCACGGCGGTGGACGGCAAGCTGTGCGGACGACTGGGGGCGCCATGAATGGTCGAGGATCCGGGGAGCCGAGTCCAGATCTTCCTGCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510730.5
CDS GCA 90 bp GCCTTCGAAGCGGAAGCTGTGGGCAGACTTCGGCCACCGTTCCATTaGCGCTTCGGGGTCACTTGCAGGAAGATCTGGACTCGGCTCCCC +
Preference number: 5 (lower is better)
Translates to: AFEAEAVGRLRPPFH*RFGVTCRKIWTRLP
Trigger: GGGGAGCCGAGTCCAGATCTTCCTGCAAGTGACCCCGAAGCGGCAATGGAACGGTGGCCGAAGTCTGCCCACAGCTTCCGCTTCGAAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510730.5
CDS CCA 90 bp GATACTGGCGCGGCATTTCCGACGCCGCCTTCGAAGCGGAAGCTGTaGGCAGACTTCGGCCACCGTTCCATTGCCGCTTCGGGGTCACTT +
Preference number: 5 (lower is better)
Translates to: DTGAAFPTPPSKRKL*ADFGHRSIAASGSL
Trigger: AAGTGACCCCGAAGCGGCAATGGAACGGTGGCCGAAGTCTGCCCACAGCTTCCGCTTCGAAGGCGGCGTCGGAAATGCCGCGCCAGTATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510730.5
CDS CCA 90 bp AAGCTCCTGACCATCTCTCGGGAGGTTCCGAAGGGCTCTGGATACTaGCGCGGCATTTCCGACGCCGCCTTCGAAGCGGAAGCTGTGGGC +
Preference number: 5 (lower is better)
Translates to: KLLTISREVPKGSGY*RGISDAAFEAEAVG
Trigger: GCCCACAGCTTCCGCTTCGAAGGCGGCGTCGGAAATGCCGCGCCAGTATCCAGAGCCCTTCGGAACCTCCCGAGAGATGGTCAGGAGCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510730.5
CDS GCA 90 bp GTGGGCAGACTTCGGCCACCGTTCCATTGCCGCTTCGGGGTCACTTaGAGGAAGATCTGGACTCGGCTCCCCGGATCCTCGACCATTCAT +
Preference number: 5 (lower is better)
Translates to: VGRLRPPFHCRFGVT*RKIWTRLPGSSTIH
Trigger: ATGAATGGTCGAGGATCCGGGGAGCCGAGTCCAGATCTTCCTGCAAGTGACCCCGAAGCGGCAATGGAACGGTGGCCGAAGTCTGCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510730.5
CDS CCA 90 bp TTTCCAAAAGCTCCTGACCATCTCTCGGGAGGTTCCGAAGGGCTCTaGATACTGGCGCGGCATTTCCGACGCCGCCTTCGAAGCGGAAGC +
Preference number: 5 (lower is better)
Translates to: FPKAPDHLSGGSEGL*ILARHFRRRLRSGS
Trigger: GCTTCCGCTTCGAAGGCGGCGTCGGAAATGCCGCGCCAGTATCCAGAGCCCTTCGGAACCTCCCGAGAGATGGTCAGGAGCTTTTGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510730.5
CDS GCA 90 bp CCTAAGATTCCAGTGCAGTCTTGCAGAGCCGAGAGGGCCCGAATGTaGCTCGAGAAGCTCCGGAGCATCCCGAATGGCATTCGGCTGATT +
Preference number: 5 (lower is better)
Translates to: PKIPVQSCRAERARM*LEKLRSIPNGIRLI
Trigger: AATCAGCCGAATGCCATTCGGGATGCTCCGGAGCTTCTCGAGGCACATTCGGGCCCTCTCGGCTCTGCAAGACTGCACTGGAATCTTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510730.5
CDS CCA 90 bp CGAGAGGGCCCGAATGTGCCTCGAGAAGCTCCGGAGCATCCCGAATaGCATTCGGCTGATTTCGGCTGCTCTCTAACCATTTTCCGGCAA +
Preference number: 5 (lower is better)
Translates to: REGPNVPREAPEHPE*HSADFGCSLTIFRQ
Trigger: TTGCCGGAAAATGGTTAGAGAGCAGCCGAAATCAGCCGAATGCCATTCGGGATGCTCCGGAGCTTCTCGAGGCACATTCGGGCCCTCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510730.5
CDS GCA 90 bp CTAAGATTAGGCGACGAAAGGAGACCTAAGATTCCAGTGCAGTCTTaGAGAGCCGAGAGGGCCCGAATGTGCCTCGAGAAGCTCCGGAGC +
Preference number: 5 (lower is better)
Translates to: LRLGDERRPKIPVQS*RAERARMCLEKLRS
Trigger: GCTCCGGAGCTTCTCGAGGCACATTCGGGCCCTCTCGGCTCTGCAAGACTGCACTGGAATCTTAGGTCTCCTTTCGTCGCCTAATCTTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510730.5
CDS-3UTR CAA 90 bp GACTCCAATCGAGTGTCTTTGCTTGGTCACTTCCCATGGTTATTCAGCTCAATCTCAGGCGCCGCCATTTaGCCGCCGCCTCTACGCTCC +
Preference number: 5 (lower is better)
Translates to: DSNRVSLLGHFPWLFSSISGAAI*PPPLRS
Trigger: GGAGCGTAGAGGCGGCGGCAAAATGGCGGCGCCTGA...GATTGAGCTGAATAACCATGGGAAGTGACCAAGCAAAGACACTCGATTGGAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR CAA 90 bp GAGCAAATGCTTGCAGATCACTGGCTTCTCAGTGTCTTCTCCCTCGCAGGTCTCGGGGCACTGCATCCTTaGTGGATGGATTTCCGTTGC +
Preference number: 5 (lower is better)
Translates to: EQMLADHWLLSVFSLAGLGALHP*WMDFRC
Trigger: GCAACGGAAATCCATCCACAAAGGATGCAGTGCCCC...GAGACCTGCGAGGGAGAAGACACTGAGAAGCCAGTGATCTGCAAGCATTTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS TCA 90 bp GAATGTGCCTCGAGAAGCTCCGGAGCATCCCGAATGGCATTCGGCTaGTTTCGGCTGCTCTCTAACCATTTTCCGGCAACCTCAGATACT +
Preference number: 5 (lower is better)
Translates to: ECASRSSGASRMAFG*FRLLSNHFPATSDT
Trigger: AGTATCTGAGGTTGCCGGAAAATGGTTAGAGAGCAGCCGAAATCAGCCGAATGCCATTCGGGATGCTCCGGAGCTTCTCGAGGCACATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510730.5
CDS GCA 90 bp CGAGAAGCTCCGGAGCATCCCGAATGGCATTCGGCTGATTTCGGCTaGTCTCTAACCATTTTCCGGCAACCTCAGATACTCTTGGAGGTT +
Preference number: 5 (lower is better)
Translates to: REAPEHPEWHSADFG*SLTIFRQPQILLEV
Trigger: AACCTCCAAGAGTATCTGAGGTTGCCGGAAAATGGTTAGAGAGCAGCCGAAATCAGCCGAATGCCATTCGGGATGCTCCGGAGCTTCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510730.5
CDS-3UTR CAA 90 bp CCGCCCTCACAGCATTCTAGGAACTACAGTAACGTCAGTCGGTTGCAGTGGTACATCCAAGCAGCCCCCTaGGTTGAGGTCTTGAGACAA +
Preference number: 5 (lower is better)
Translates to: PPSQHSRNYSNVSRLQWYIQAAP*VEVLRQ
Trigger: TTGTCTCAAGACCTCAACCAAGGGGGCTGCTTGGAT...GTACCACTGCAACCGACTGACGTTACTGTAGTTCCTAGAATGCTGTGAGGGCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR CAA 90 bp GCTAGTCCTTTGGAAAGGCACCAGGCTTGGCAATTCAGGAAAGCCCAGGGCTGGGCAAGAGAGAAAGCCTaGAGACTACAACTCCAGCAA +
Preference number: 5 (lower is better)
Translates to: ASPLERHQAWQFRKAQGWAREKA*RLQLQQ
Trigger: TTGCTGGAGTTGTAGTCTCAAGGCTTTCTCTCTTGC...CCAGCCCTGGGCTTTCCTGAATTGCCAAGCCTGGTGCCTTTCCAAAGGACTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR CAA 90 bp CTGGCTCCACCACAGGCCCTGCTAGTCCTTTGGAAAGGCACCAGGCTTGGCAATATCGAGTGTCTTTGCTaGGTCACTTCCCATGGTTAT +
Preference number: 5 (lower is better)
Translates to: LAPPQALLVLWKGTRLGNIECLC*VTSHGY
Trigger: ATAACCATGGGAAGTGACCAAGCAAAGACACTCGAT...ATTGCCAAGCCTGGTGCCTTTCCAAAGGACTAGCAGGGCCTGTGGTGGAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR CAA 90 bp TTGGGGCACTGCATCCTTTGTGGATGGATTTCCGTTGCTGTGTTCCTCACAAGTCGTGATGGAGGTGGGTaGAAAACACTAGGTACGCCC +
Preference number: 5 (lower is better)
Translates to: LGHCILCGWISVAVFLTSRDGGG*KTLGTP
Trigger: GGGCGTACCTAGTGTTTTCAACCCACCTCCATCACG...ACTTGTGAGGAACACAGCAACGGAAATCCATCCACAAAGGATGCAGTGCCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR CAA 90 bp GACTCCAATCGAGTGTCTTTGCTTGGTCACTTCCCATGGTTATTCAGCTCAATCTGTAGCGTAGGGGGATaGGGCCACTCCTCTGAAGGG +
Preference number: 5 (lower is better)
Translates to: DSNRVSLLGHFPWLFSSICSVGG*GHSSEG
Trigger: CCCTTCAGAGGAGTGGCCCAATCCCCCTACGCTACA...GATTGAGCTGAATAACCATGGGAAGTGACCAAGCAAAGACACTCGATTGGAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR CAA 90 bp AGTTGTAGAGCGGAGCTCCTTGTTCAAGCACCGGATAATGATGCCCCTGATTTTGCCAAGCGGGTACGTTaGTTGCTAACCTTGCGCGCA +
Preference number: 5 (lower is better)
Translates to: SCRAELLVQAPDNDAPDFAKRVR*LLTLRA
Trigger: TGCGCGCAAGGTTAGCAACAAACGTACCCGCTTGGC...AAAATCAGGGGCATCATTATCCGGTGCTTGAACAAGGAGCTCCGCTCTACAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR CAA 90 bp TCAGTGTCTTCTCCCTCGCAGGTCTCATCAAAATCCCAAAAGTCCTTAGGAGTAACAGGAAGGGTGGGCTaGCCAAGCGGGTACGTTTGT +
Preference number: 5 (lower is better)
Translates to: SVSSPSQVSSKSQKSLGVTGRVG*PSGYVC
Trigger: ACAAACGTACCCGCTTGGCAAGCCCACCCTTCCTGT...TACTCCTAAGGACTTTTGGGATTTTGATGAGACCTGCGAGGGAGAAGACACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR CAA 90 bp GTACTGGCATTAAGTGACAAAATGTGCAGCCTGTATTTGACTGAGGAGGAAAGGGGCCCTGCTAGTCCTTaGGAAAGGCACCAGGCTTGG +
Preference number: 5 (lower is better)
Translates to: VLALSDKMCSLYLTEEERGPASP*ERHQAW
Trigger: CCAAGCCTGGTGCCTTTCCAAAGGACTAGCAGGGCC...CCTTTCCTCCTCAGTCAAATACAGGCTGCACATTTTGTCACTTAATGCCAGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR CAA 90 bp ATCCTTTGGTTCAGACCCCATAACCACCACCTGGTACAGACTCCAAGGAAAAGCAGTAACGTCAGTCGGTaGCAGTGGTACAACGAGCCT +
Preference number: 5 (lower is better)
Translates to: ILWFRPHNHHLVQTPRKSSNVSR*QWYNEP
Trigger: AGGCTCGTTGTACCACTGCAACCGACTGACGTTACT...GCTTTTCCTTGGAGTCTGTACCAGGTGGTGGTTATGGGGTCTGAACCAAAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR CAA 90 bp ATCCTTTGGTTCAGACCCCATAACCACCACCTGGTACAGACTCCAAGGAAAAGCGTAGAGCGGAGCTCCTaGTTCAAGCACCGGATAATG +
Preference number: 5 (lower is better)
Translates to: ILWFRPHNHHLVQTPRKSVERSS*FKHRIM
Trigger: CATTATCCGGTGCTTGAACAAGGAGCTCCGCTCTAC...GCTTTTCCTTGGAGTCTGTACCAGGTGGTGGTTATGGGGTCTGAACCAAAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR CAA 90 bp GACTCCAATCGAGTGTCTTTGCTTGGTCACTTCCCATGGTTATTCAGCTCAATCCGTTTGTTGCTAACCTaGCGCGCACACACAGGTTGT +
Preference number: 5 (lower is better)
Translates to: DSNRVSLLGHFPWLFSSIRLLLT*RAHTGC
Trigger: ACAACCTGTGTGTGCGCGCAAGGTTAGCAACAAACG...GATTGAGCTGAATAACCATGGGAAGTGACCAAGCAAAGACACTCGATTGGAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR CAA 90 bp GTACTGGCATTAAGTGACAAAATGTGCAGCCTGTATTTGACTGAGGAGGAAAGGAAGCGGGTACGTTTGTaGCTAACCTTGCGCGCACAC +
Preference number: 5 (lower is better)
Translates to: VLALSDKMCSLYLTEEERKRVRL*LTLRAH
Trigger: GTGTGCGCGCAAGGTTAGCAACAAACGTACCCGCTT...CCTTTCCTCCTCAGTCAAATACAGGCTGCACATTTTGTCACTTAATGCCAGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR CAA 90 bp TGCAGAAGTGGAAGAAAAGACCAGAAGGGCTCCACTGAGGGTACAAATATTCAAGGAAAGGCACCAGGCTaGGCAATTCAGGAAAGCCCA +
Preference number: 5 (lower is better)
Translates to: CRSGRKDQKGSTEGTNIQGKAPG*AIQESP
Trigger: TGGGCTTTCCTGAATTGCCAAGCCTGGTGCCTTTCC...TTGAATATTTGTACCCTCAGTGGAGCCCTTCTGGTCTTTTCTTCCACTTCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR CAA 90 bp AGTTGTAGAGCGGAGCTCCTTGTTCAAGCACCGGATAATGATGCCCCTGATTTTGTGGATGGATTTCCGTaGCTGTGTTCCTCACAAGTC +
Preference number: 5 (lower is better)
Translates to: SCRAELLVQAPDNDAPDFVDGFP*LCSSQV
Trigger: GACTTGTGAGGAACACAGCAACGGAAATCCATCCAC...AAAATCAGGGGCATCATTATCCGGTGCTTGAACAAGGAGCTCCGCTCTACAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR CAA 90 bp GTACTGGCATTAAGTGACAAAATGTGCAGCCTGTATTTGACTGAGGAGGAAAGGCAGGCGCAGTACAAGTaGGGGCACTGCATCCTTTGT +
Preference number: 5 (lower is better)
Translates to: VLALSDKMCSLYLTEEERQAQYK*GHCILC
Trigger: ACAAAGGATGCAGTGCCCCAACTTGTACTGCGCCTG...CCTTTCCTCCTCAGTCAAATACAGGCTGCACATTTTGTCACTTAATGCCAGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR CAA 90 bp AGTTGTAGAGCGGAGCTCCTTGTTCAAGCACCGGATAATGATGCCCCTGATTTTTTACATATACAGCCTTaGTGGGGCCACAAACCCAGA +
Preference number: 5 (lower is better)
Translates to: SCRAELLVQAPDNDAPDFLHIQP*WGHKPR
Trigger: TCTGGGTTTGTGGCCCCACAAAGGCTGTATATGTAA...AAAATCAGGGGCATCATTATCCGGTGCTTGAACAAGGAGCTCCGCTCTACAACT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR CAA 90 bp TCAGTGTCTTCTCCCTCGCAGGTCTCATCAAAATCCCAAAAGTCCTTAGGAGTATCCAATCGAGTGTCTTaGCTTGGTCACTTCCCATGG +
Preference number: 5 (lower is better)
Translates to: SVSSPSQVSSKSQKSLGVSNRVS*LGHFPW
Trigger: CCATGGGAAGTGACCAAGCAAAGACACTCGATTGGA...TACTCCTAAGGACTTTTGGGATTTTGATGAGACCTGCGAGGGAGAAGACACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR CAA 90 bp TTCTGGCAGCTGACTTCCTTCACTGAACAACTATTATCAAAAGGCGAGAGGCATACTAGGTACGCCCTCTaGCTCATTCAATCTGTCCTG +
Preference number: 5 (lower is better)
Translates to: FWQLTSFTEQLLSKGERHTRYAL*LIQSVL
Trigger: CAGGACAGATTGAATGAGCAAGAGGGCGTACCTAGT...ATGCCTCTCGCCTTTTGATAATAGTTGTTCAGTGAAGGAAGTCAGCTGCCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR CAA 90 bp CTGACTCCAATCGAGTGTCTTTGCTTGGTCACTTCCCATGGTTATTCAGCTCAAAACACTTTGGAATACTaGTCAGAGCGCACTGGCATC +
Preference number: 5 (lower is better)
Translates to: LTPIECLCLVTSHGYSAQNTLEY*SERTGI
Trigger: GATGCCAGTGCGCTCTGACAAGTATTCCAAAGTGTT...TTGAGCTGAATAACCATGGGAAGTGACCAAGCAAAGACACTCGATTGGAGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR CAA 90 bp TTCTGGCAGCTGACTTCCTTCACTGAACAACTATTATCAAAAGGCGAGAGGCATATGATGCCCCTGATTTaGCATTCTGGGGGTTATCGC +
Preference number: 5 (lower is better)
Translates to: FWQLTSFTEQLLSKGERHMMPLI*HSGGYR
Trigger: GCGATAACCCCCAGAATGCAAAATCAGGGGCATCAT...ATGCCTCTCGCCTTTTGATAATAGTTGTTCAGTGAAGGAAGTCAGCTGCCAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR CAA 90 bp AAGTCCTTAGGAGTAACACAGATTGTACTGGCATTAAGTGACAAAATGTGCAGCTCCACTCATCTGGCCTaGGGACAGCAGAAAACGAAG +
Preference number: 5 (lower is better)
Translates to: KSLGVTQIVLALSDKMCSSTHLA*GQQKTK
Trigger: CTTCGTTTTCTGCTGTCCCAAGGCCAGATGAGTGGA...GCTGCACATTTTGTCACTTAATGCCAGTACAATCTGTGTTACTCCTAAGGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR CAA 90 bp TTCTGGCAGCTGACTTCCTTCACTGAACAACTATTATCAAAAGGCGAGAGGCATAATTCCTCTGCATGGTaGTCAGCAGGAAGGTTTCAC +
Preference number: 5 (lower is better)
Translates to: FWQLTSFTEQLLSKGERHNSSAW*SAGRFH
Trigger: GTGAAACCTTCCTGCTGACAACCATGCAGAGGAATT...ATGCCTCTCGCCTTTTGATAATAGTTGTTCAGTGAAGGAAGTCAGCTGCCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR CAA 90 bp GACTCCAATCGAGTGTCTTTGCTTGGTCACTTCCCATGGTTATTCAGCTCAATCAACAAGAGCAAATGCTaGCAGATCACTGGCTTCTCA +
Preference number: 5 (lower is better)
Translates to: DSNRVSLLGHFPWLFSSINKSKC*QITGFS
Trigger: TGAGAAGCCAGTGATCTGCAAGCATTTGCTCTTGTT...GATTGAGCTGAATAACCATGGGAAGTGACCAAGCAAAGACACTCGATTGGAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR CAA 90 bp TTCTGGCAGCTGACTTCCTTCACTGAACAACTATTATCAAAAGGCGAGAGGCATTCTGAAACTCTTTGCTaGGCCTTGGCACCATTAGCA +
Preference number: 5 (lower is better)
Translates to: FWQLTSFTEQLLSKGERHSETLC*ALAPLA
Trigger: TGCTAATGGTGCCAAGGCCAAGCAAAGAGTTTCAGA...ATGCCTCTCGCCTTTTGATAATAGTTGTTCAGTGAAGGAAGTCAGCTGCCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR CAA 90 bp GGTCTCATCAAAATCCCAAAAGTCCTTAGGAGTAACACAGATTGTACTGGCATTGGTGCACAGAGTGTGTaGCGACAAAACTCATCAGAG +
Preference number: 5 (lower is better)
Translates to: GLIKIPKVLRSNTDCTGIGAQSV*RQNSSE
Trigger: CTCTGATGAGTTTTGTCGCAACACACTCTGTGCACC...AATGCCAGTACAATCTGTGTTACTCCTAAGGACTTTTGGGATTTTGATGAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR CAA 90 bp TGCAGAAGTGGAAGAAAAGACCAGAAGGGCTCCACTGAGGGTACAAATATTCAAACTTTTATTACACTATaGTGGGCTAAGGAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: CRSGRKDQKGSTEGTNIQTFITL*WAKEPR
Trigger: CCTGGGCTCCTTAGCCCACAATAGTGTAATAAAAGT...TTGAATATTTGTACCCTCAGTGGAGCCCTTCTGGTCTTTTCTTCCACTTCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS TCA 90 bp TCAGGTGCACAGAGTGTGTTGCTGTGGAAAGGTATGAAAAGGATATaGGAACAACTTGCTGACTATAAACTGTCACCAGAAAGAGTCAGA +
Preference number: 5 (lower is better)
Translates to: SGAQSVLLWKGMKRI*EQLADYKLSPERVR
Trigger: TCTGACTCTTTCTGGTGACAGTTTATAGTCAGCAAGTTGTTCTCATATCCTTTTCATACCTTTCCACAGCAACACACTCTGTGCACCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504983.1
CDS-3UTR CAA 90 bp GCAGGAAGGTTTCACGTAAGGTTATCCTTATGTGGAGAACATGGGTTATCCTGCTTCACAACTGCTCAATaGAAGGTTCTAGGTTCTTTT +
Preference number: 5 (lower is better)
Translates to: AGRFHVRLSLCGEHGLSCFTTAQ*KVLGSF
Trigger: AAAAGAACCTAGAACCTTCAATTGAGCAGTTGTGAA...GCAGGATAACCCATGTTCTCCACATAAGGATAACCTTACGTGAAACCTTCCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR CAA 90 bp AAGTCCTTAGGAGTAACACAGATTGTACTGGCATTAAGTGACAAAATGTGCAGCACTCTTTGCTTGGCCTaGGCACCATTAGCAATTTTC +
Preference number: 5 (lower is better)
Translates to: KSLGVTQIVLALSDKMCSTLCLA*APLAIF
Trigger: GAAAATTGCTAATGGTGCCAAGGCCAAGCAAAGAGT...GCTGCACATTTTGTCACTTAATGCCAGTACAATCTGTGTTACTCCTAAGGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS-3UTR CAA 90 bp ACAATGGCAGAAATAAGCACAAACCAGCCCGGGGCACTTTTATTACACTATTGTAGGAGAAAGAAGTATTaGCTAGAGGAAATTCTGCAG +
Preference number: 5 (lower is better)
Translates to: TMAEISTNQPGALLLHYCRRKKY*LEEILQ
Trigger: CTGCAGAATTTCCTCTAGCAAATACTTCTTTCTCCT...ACAATAGTGTAATAAAAGTGCCCCGGGCTGGTTTGTGCTTATTTCTGCCATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261942.7
CDS CAA 90 bp CCCGGATCCTCGACCATTCATGGCGCCCCCAGTCGTCCGCACAGCTaGCCGTCCACCGCCGTGACTGCGGCGCTGGAACCCCGGCCCGGC +
Preference number: 6 (lower is better)
Translates to: PGSSTIHGAPSRPHS*PSTAVTAALEPRPG
Trigger: GCCGGGCCGGGGTTCCAGCGCCGCAGTCACGGCGGTGGACGGCAAGCTGTGCGGACGACTGGGGGCGCCATGAATGGTCGAGGATCCGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510730.5
CDS GCA 72 bp CAGTCGTCCGCACAGCTTGCCGTCCACCGCCGTGACTaGGGCGCTGGAACCCCGGCCCGGCATCTGCTTTTC +
Preference number: 6 (lower is better)
Translates to: QSSAQLAVHRRD*GAGTPARHLLF
Trigger: GAAAAGCAGATGCCGGGCCGGGGTTCCAGCGCCGCAGTCACGGCGGTGGACGGCAAGCTGTGCGGACGACTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510730.5
CDS CAA 72 bp TCGACCATTCATGGCGCCCCCAGTCGTCCGCACAGCTaGCCGTCCACCGCCGTGACTGCGGCGCTGGAACCC +
Preference number: 6 (lower is better)
Translates to: STIHGAPSRPHS*PSTAVTAALEP
Trigger: GGGTTCCAGCGCCGCAGTCACGGCGGTGGACGGCAAGCTGTGCGGACGACTGGGGGCGCCATGAATGGTCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510730.5
CDS GCA 72 bp GCCGTGACTGCGGCGCTGGAACCCCGGCCCGGCATCTaGTTTTCCGTGCCTGGAGCCTTGTCTCTCCGCACT +
Preference number: 6 (lower is better)
Translates to: AVTAALEPRPGI*FSVPGALSLRT
Trigger: AGTGCGGAGAGACAAGGCTCCAGGCACGGAAAAGCAGATGCCGGGCCGGGGTTCCAGCGCCGCAGTCACGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510730.5
CDS CCA 72 bp GATCTGGACTCGGCTCCCCGGATCCTCGACCATTCATaGCGCCCCCAGTCGTCCGCACAGCTTGCCGTCCAC +
Preference number: 6 (lower is better)
Translates to: DLDSAPRILDHS*RPQSSAQLAVH
Trigger: GTGGACGGCAAGCTGTGCGGACGACTGGGGGCGCCATGAATGGTCGAGGATCCGGGGAGCCGAGTCCAGATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510730.5
CDS CCA 72 bp GCGGCATTTCCGACGCCGCCTTCGAAGCGGAAGCTGTaGGCAGACTTCGGCCACCGTTCCATTGCCGCTTCG +
Preference number: 6 (lower is better)
Translates to: AAFPTPPSKRKL*ADFGHRSIAAS
Trigger: CGAAGCGGCAATGGAACGGTGGCCGAAGTCTGCCCACAGCTTCCGCTTCGAAGGCGGCGTCGGAAATGCCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510730.5
CDS GCA 72 bp CTTCGGCCACCGTTCCATTGCCGCTTCGGGGTCACTTaGAGGAAGATCTGGACTCGGCTCCCCGGATCCTCG +
Preference number: 6 (lower is better)
Translates to: LRPPFHCRFGVT*RKIWTRLPGSS
Trigger: CGAGGATCCGGGGAGCCGAGTCCAGATCTTCCTGCAAGTGACCCCGAAGCGGCAATGGAACGGTGGCCGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510730.5
CDS CCA 72 bp GCTCCTGACCATCTCTCGGGAGGTTCCGAAGGGCTCTaGATACTGGCGCGGCATTTCCGACGCCGCCTTCGA +
Preference number: 6 (lower is better)
Translates to: APDHLSGGSEGL*ILARHFRRRLR
Trigger: TCGAAGGCGGCGTCGGAAATGCCGCGCCAGTATCCAGAGCCCTTCGGAACCTCCCGAGAGATGGTCAGGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510730.5
CDS CAA 90 bp CGCCTTCGAAGCGGAAGCTGTGGGCAGACTTCGGCCACCGTTCCATaGCCGCTTCGGGGTCACTTGCAGGAAGATCTGGACTCGGCTCCC +
Preference number: 6 (lower is better)
Translates to: RLRSGSCGQTSATVP*PLRGHLQEDLDSAP
Trigger: GGGAGCCGAGTCCAGATCTTCCTGCAAGTGACCCCGAAGCGGCAATGGAACGGTGGCCGAAGTCTGCCCACAGCTTCCGCTTCGAAGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510730.5
CDS CCA 72 bp ACCATCTCTCGGGAGGTTCCGAAGGGCTCTGGATACTaGCGCGGCATTTCCGACGCCGCCTTCGAAGCGGAA +
Preference number: 6 (lower is better)
Translates to: TISREVPKGSGY*RGISDAAFEAE
Trigger: TTCCGCTTCGAAGGCGGCGTCGGAAATGCCGCGCCAGTATCCAGAGCCCTTCGGAACCTCCCGAGAGATGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510730.5
CDS CAA 72 bp ACTTCGGCCACCGTTCCATTGCCGCTTCGGGGTCACTaGCAGGAAGATCTGGACTCGGCTCCCCGGATCCTC +
Preference number: 6 (lower is better)
Translates to: TSATVPLPLRGH*QEDLDSAPRIL
Trigger: GAGGATCCGGGGAGCCGAGTCCAGATCTTCCTGCAAGTGACCCCGAAGCGGCAATGGAACGGTGGCCGAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510730.5
CDS CAA 90 bp TGTGGGCAGACTTCGGCCACCGTTCCATTGCCGCTTCGGGGTCACTaGCAGGAAGATCTGGACTCGGCTCCCCGGATCCTCGACCATTCA +
Preference number: 6 (lower is better)
Translates to: CGQTSATVPLPLRGH*QEDLDSAPRILDHS
Trigger: TGAATGGTCGAGGATCCGGGGAGCCGAGTCCAGATCTTCCTGCAAGTGACCCCGAAGCGGCAATGGAACGGTGGCCGAAGTCTGCCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510730.5
CDS GCA 72 bp GCGGAAGCTGTGGGCAGACTTCGGCCACCGTTCCATTaGCGCTTCGGGGTCACTTGCAGGAAGATCTGGACT +
Preference number: 6 (lower is better)
Translates to: AEAVGRLRPPFH*RFGVTCRKIWT
Trigger: AGTCCAGATCTTCCTGCAAGTGACCCCGAAGCGGCAATGGAACGGTGGCCGAAGTCTGCCCACAGCTTCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510730.5
CDS GCA 72 bp CCAGTGCAGTCTTGCAGAGCCGAGAGGGCCCGAATGTaGCTCGAGAAGCTCCGGAGCATCCCGAATGGCATT +
Preference number: 6 (lower is better)
Translates to: PVQSCRAERARM*LEKLRSIPNGI
Trigger: AATGCCATTCGGGATGCTCCGGAGCTTCTCGAGGCACATTCGGGCCCTCTCGGCTCTGCAAGACTGCACTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510730.5
CDS CAA 72 bp AGCGGAAGCTGTGGGCAGACTTCGGCCACCGTTCCATaGCCGCTTCGGGGTCACTTGCAGGAAGATCTGGAC +
Preference number: 6 (lower is better)
Translates to: SGSCGQTSATVP*PLRGHLQEDLD
Trigger: GTCCAGATCTTCCTGCAAGTGACCCCGAAGCGGCAATGGAACGGTGGCCGAAGTCTGCCCACAGCTTCCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510730.5
CDS CCA 72 bp TTCCATTGCCGCTTCGGGGTCACTTGCAGGAAGATCTaGACTCGGCTCCCCGGATCCTCGACCATTCATGGC +
Preference number: 6 (lower is better)
Translates to: FHCRFGVTCRKI*TRLPGSSTIHG
Trigger: GCCATGAATGGTCGAGGATCCGGGGAGCCGAGTCCAGATCTTCCTGCAAGTGACCCCGAAGCGGCAATGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510730.5
CDS GCA 72 bp GGCGACGAAAGGAGACCTAAGATTCCAGTGCAGTCTTaGAGAGCCGAGAGGGCCCGAATGTGCCTCGAGAAG +
Preference number: 6 (lower is better)
Translates to: GDERRPKIPVQS*RAERARMCLEK
Trigger: CTTCTCGAGGCACATTCGGGCCCTCTCGGCTCTGCAAGACTGCACTGGAATCTTAGGTCTCCTTTCGTCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510730.5
CDS TCA 72 bp TCGAGAAGCTCCGGAGCATCCCGAATGGCATTCGGCTaGTTTCGGCTGCTCTCTAACCATTTTCCGGCAACC +
Preference number: 6 (lower is better)
Translates to: SRSSGASRMAFG*FRLLSNHFPAT
Trigger: GGTTGCCGGAAAATGGTTAGAGAGCAGCCGAAATCAGCCGAATGCCATTCGGGATGCTCCGGAGCTTCTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510730.5
CDS CCA 72 bp CCGAATGTGCCTCGAGAAGCTCCGGAGCATCCCGAATaGCATTCGGCTGATTTCGGCTGCTCTCTAACCATT +
Preference number: 6 (lower is better)
Translates to: PNVPREAPEHPE*HSADFGCSLTI
Trigger: AATGGTTAGAGAGCAGCCGAAATCAGCCGAATGCCATTCGGGATGCTCCGGAGCTTCTCGAGGCACATTCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510730.5
CDS GCA 72 bp CCGGAGCATCCCGAATGGCATTCGGCTGATTTCGGCTaGTCTCTAACCATTTTCCGGCAACCTCAGATACTC +
Preference number: 6 (lower is better)
Translates to: PEHPEWHSADFG*SLTIFRQPQIL
Trigger: GAGTATCTGAGGTTGCCGGAAAATGGTTAGAGAGCAGCCGAAATCAGCCGAATGCCATTCGGGATGCTCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510730.5
CDS CAA 90 bp GATTTCGGCTGCTCTCTAACCATTTTCCGGCAACCTCAGATACTCTaGGAGGTTTCTCGGGAGACGCAGCCGTTCCGAAATACCAGCCTT +
Preference number: 6 (lower is better)
Translates to: DFGCSLTIFRQPQIL*EVSRETQPFRNTSL
Trigger: AAGGCTGGTATTTCGGAACGGCTGCGTCTCCCGAGAAACCTCCAAGAGTATCTGAGGTTGCCGGAAAATGGTTAGAGAGCAGCCGAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510730.5
CDS CAA 72 bp TGCTCTCTAACCATTTTCCGGCAACCTCAGATACTCTaGGAGGTTTCTCGGGAGACGCAGCCGTTCCGAAAT +
Preference number: 6 (lower is better)
Translates to: CSLTIFRQPQIL*EVSRETQPFRN
Trigger: ATTTCGGAACGGCTGCGTCTCCCGAGAAACCTCCAAGAGTATCTGAGGTTGCCGGAAAATGGTTAGAGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510730.5
CDS GCA 72 bp CAAGCAGAAAAGGGATCATTTCTTCCTCTGCTGGCCTaGATAACTCCTTTAATTCCCCCTTCTCTCTGTCCA +
Preference number: 6 (lower is better)
Translates to: QAEKGSFLPLLA*ITPLIPPSLCP
Trigger: TGGACAGAGAGAAGGGGGAATTAAAGGAGTTATGCAGGCCAGCAGAGGAAGAAATGATCCCTTTTCTGCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506061.1
ENST00000510446.1
CDS TCA 72 bp CAGAGTGTGTTGCTGTGGAAAGGTATGAAAAGGATATaGGAACAACTTGCTGACTATAAACTGTCACCAGAA +
Preference number: 6 (lower is better)
Translates to: QSVLLWKGMKRI*EQLADYKLSPE
Trigger: TTCTGGTGACAGTTTATAGTCAGCAAGTTGTTCTCATATCCTTTTCATACCTTTCCACAGCAACACACTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504983.1