RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAF1 (Homo sapiens)

Ensembl gene IDs: ENSG00000185104

Ensembl transcript IDs: ENST00000371778.5, ENST00000396153.7, ENST00000472808.1, ENST00000487898.1, ENST00000494400.5

Found 480 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGACGCAGGCTaGTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTGTT +
Preference number: 1 (lower is better)
Translates to: ERVGGLARSPSPDAG*WLVKEWLVPPLGRV
Trigger: AACACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494400.5
3UTR CCA 90 bp CGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGACGCAGGCTGCTaGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTGTTTAC +
Preference number: 1 (lower is better)
Translates to: RVGGLARSPSPDAGC*LVKEWLVPPLGRVY
Trigger: GTAAACACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGGAGAAGGGCTCCTCGCCAACCCACCCACACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494400.5
3UTR CCA 90 bp TGCAAGAGGCAGAAGTGTGACATTGAATTGAGTGAGACGAGCGTGTaGGTGGGTTGGCGAGGAGCCCTTCTCCTGACGCAGGCTGCTGGC +
Preference number: 1 (lower is better)
Translates to: CKRQKCDIELSETSV*VGWRGALLLTQAAG
Trigger: GCCAGCAGCCTGCGTCAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACACTTCTGCCTCTTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
3UTR CCA 90 bp GGAGCCCTTCTCCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTaGTTCCACCGCTGGGCCGTGTTTACTCTTTTGCTTCAAGGAAAA +
Preference number: 1 (lower is better)
Translates to: GALLLTQAAGLSRNG*FHRWAVFTLLLQGK
Trigger: TTTTCCTTGAAGCAAAAGAGTAAACACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGGAGAAGGGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494400.5
3UTR TCA 90 bp AAGATAGGAATAGAGCTGGAGAGAAGTGTTCAGTTTGAACTCCCCTaGACACTTCCCCTGAAGGGAGACCCATGGGTCTCTCAGCCTCCC +
Preference number: 1 (lower is better)
Translates to: KIGIELERSVQFELP*TLPLKGDPWVSQPP
Trigger: GGGAGGCTGAGAGACCCATGGGTCTCCCTTCAGGGGAAGTGTTCAGGGGAGTTCAAACTGAACACTTCTCTCCAGCTCTATTCCTATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396153.7
3UTR CCA 90 bp AGTTACTCCTGGACTGAACTAAAGACTCCAAGTCCCATCCACTTGTaGGGACCCAGGACTGGATGGCTAAGGGACAGAAAAGGATGGGTA +
Preference number: 1 (lower is better)
Translates to: SYSWTELKTPSPIHL*GPRTGWLRDRKGWV
Trigger: TACCCATCCTTTTCTGTCCCTTAGCCATCCAGTCCTGGGTCCCCACAAGTGGATGGGACTTGGAGTCTTTAGTTCAGTCCAGGAGTAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396153.7
3UTR CCA 90 bp AACTGCACATCCAGCAGTCCAAGAACACAAGGGAGTAAACTGGAATaGGGGATGACAAAGAGTCCTGGAGCTTCACTGTCAACAGTTGGG +
Preference number: 1 (lower is better)
Translates to: NCTSSSPRTQGSKLE*GMTKSPGASLSTVG
Trigger: CCCAACTGTTGACAGTGAAGCTCCAGGACTCTTTGTCATCCCCCATTCCAGTTTACTCCCTTGTGTTCTTGGACTGCTGGATGTGCAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396153.7
3UTR TCA 90 bp CACTGTCAACAGTTGGGCATAAGAATGCCAAGCAAATATTCAGACTaGCTCACTTACTGGGCCTGGAGGCTGGGATGTAAAGCCCAAGGA +
Preference number: 1 (lower is better)
Translates to: HCQQLGIRMPSKYSD*LTYWAWRLGCKAQG
Trigger: TCCTTGGGCTTTACATCCCAGCCTCCAGGCCCAGTAAGTGAGTCAGTCTGAATATTTGCTTGGCATTCTTATGCCCAACTGTTGACAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
3UTR TCA 90 bp CATCCAGCAGTCCAAGAACACAAGGGAGTAAACTGGAATGGGGGATaGCAAAGAGTCCTGGAGCTTCACTGTCAACAGTTGGGCATAAGA +
Preference number: 1 (lower is better)
Translates to: HPAVQEHKGVNWNGG*QRVLELHCQQLGIR
Trigger: TCTTATGCCCAACTGTTGACAGTGAAGCTCCAGGACTCTTTGTCATCCCCCATTCCAGTTTACTCCCTTGTGTTCTTGGACTGCTGGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396153.7
3UTR GCA 90 bp TGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTGTTTACTCTTTTaGTTCAAGGAAAAGGGTTTCTTGAGGGAACAACTTTACCTCCAA +
Preference number: 1 (lower is better)
Translates to: CQGMAGSTAGPCLLF*FKEKGFLREQLYLQ
Trigger: TTGGAGGTAAAGTTGTTCCCTCAAGAAACCCTTTTCCTTGAAGCAAAAGAGTAAACACGGCCCAGCGGTGGAACCAGCCATTCCTTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494400.5
3UTR TCA 90 bp CCAAATGCAAACCTAACAGTAGCCTCTTGCCATTGGGCCAGATACTaGAGTTTTGGTACTGGCCTCTCTGCACATGATCTCAACATTCAC +
Preference number: 1 (lower is better)
Translates to: PNANLTVASCHWARY*SFGTGLSAHDLNIH
Trigger: GTGAATGTTGAGATCATGTGCAGAGAGGCCAGTACCAAAACTTCAGTATCTGGCCCAATGGCAAGAGGCTACTGTTAGGTTTGCATTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396153.7
3UTR TCA 90 bp TACACAGACTATAATGTGCAATGCCTATATGAGTTACTCCTGGACTaGACTAAAGACTCCAAGTCCCATCCACTTGTGGGGACCCAGGAC +
Preference number: 1 (lower is better)
Translates to: YTDYNVQCLYELLLD*TKDSKSHPLVGTQD
Trigger: GTCCTGGGTCCCCACAAGTGGATGGGACTTGGAGTCTTTAGTTCAGTCCAGGAGTAACTCATATAGGCATTGCACATTATAGTCTGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396153.7
3UTR TCA 90 bp CCATTGGGCCAGATACTGAAGTTTTGGTACTGGCCTCTCTGCACATaGTCTCAACATTCACATTGTGTGCTTGAACAGTTTCCCTATGCT +
Preference number: 1 (lower is better)
Translates to: PLGQILKFWYWPLCT*SQHSHCVLEQFPYA
Trigger: AGCATAGGGAAACTGTTCAAGCACACAATGTGAATGTTGAGATCATGTGCAGAGAGGCCAGTACCAAAACTTCAGTATCTGGCCCAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396153.7
3UTR CCA 90 bp TTCCCTATGCTGCAATGGAACAGCAAATACCTCCTAGGTAGAACCTaGAGACCCAAGGCAGCAGCAGTAAATAAATATCTTGCATATATG +
Preference number: 1 (lower is better)
Translates to: FPMLQWNSKYLLGRT*RPKAAAVNKYLAYM
Trigger: CATATATGCAAGATATTTATTTACTGCTGCTGCCTTGGGTCTCCAGGTTCTACCTAGGAGGTATTTGCTGTTCCATTGCAGCATAGGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
3UTR CCA 90 bp AAGGTGAGTGGGAGGGAACAATATAATGAAGAAACCCAAGTCAGATaGAACAGGTTAAACATGAAGGTGAATTCAGAGTACCTTCCCTCA +
Preference number: 1 (lower is better)
Translates to: KVSGREQYNEETQVR*NRLNMKVNSEYLPS
Trigger: TGAGGGAAGGTACTCTGAATTCACCTTCATGTTTAACCTGTTCCATCTGACTTGGGTTTCTTCATTATATTGTTCCCTCCCACTCACCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
3UTR TCA 90 bp TGCAGTGGTATCCTTGATGGTGGCTTTGGTCACTATACTATTAAATaGCAATATAAGTGGGGAAGGCCCAGAGGGGATTCTATTAAGAAT +
Preference number: 1 (lower is better)
Translates to: CSGILDGGFGHYTIK*QYKWGRPRGDSIKN
Trigger: ATTCTTAATAGAATCCCCTCTGGGCCTTCCCCACTTATATTGTCATTTAATAGTATAGTGACCAAAGCCACCATCAAGGATACCACTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494400.5
3UTR-3UTR CCA 90 bp CCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTAGACGAGCGTGTGGGTaGGTTGGCGAGGAGCCCTTC +
Preference number: 2 (lower is better)
Translates to: PDAGCWLVKEWLVPPLGRRRACG*VGEEPF
Trigger: GAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCT...ACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
3UTR-3UTR CCA 90 bp AGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGACGCAGGCTTTGTCAAGGAATGGCTaGTTCCACCGCTGGGCCGTG +
Preference number: 2 (lower is better)
Translates to: SETSVWVGWRGALLLTQALSRNG*FHRWAV
Trigger: CACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAA...AGCCTGCGTCAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
3UTR-3UTR CCA 90 bp AGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGACGCAGGCTTGGCTTGTCAAGGAATaGCTGGTTCCACCGCTGGGC +
Preference number: 2 (lower is better)
Translates to: SETSVWVGWRGALLLTQAWLVKE*LVPPLG
Trigger: GCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCA...AGCCTGCGTCAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
3UTR-3UTR CCA 90 bp ATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGTTGTCAAGGAATGGCTaGTTCCACCGCTGGGCCGTG +
Preference number: 2 (lower is better)
Translates to: IELSETSVWVGWRGALLLLSRNG*FHRWAV
Trigger: CACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAA...CAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTCAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
3UTR-3UTR CCA 90 bp CAGGGGGTAGGGGAGGGTGGCAGAGTTGTAATTCTCTGTAATAAGGGTTGGGAAAGACGAGCGTGTGGGTaGGTTGGCGAGGAGCCCTTC +
Preference number: 2 (lower is better)
Translates to: QGVGEGGRVVILCNKGWERRACG*VGEEPF
Trigger: GAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCT...TTCCCAACCCTTATTACAGAGAATTACAACTCTGCCACCCTCCCCTACCCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396153.7
3UTR-3UTR GCA 90 bp CAGAAGTGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGATCTCCTGACGCAGGCTaGTGGCTTGTCAAGGAATGG +
Preference number: 2 (lower is better)
Translates to: QKCDIELSETSVWVGWRGSPDAG*WLVKEW
Trigger: CCATTCCTTGACAAGCCAGCAGCCTGCGTCAGGAGA...TCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACACTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
3UTR-3UTR CCA 90 bp AAGAGGCAGAAGTGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCCTGACGCAGGCTGCTaGCTTGTCAAGGAATGGCTG +
Preference number: 2 (lower is better)
Translates to: KRQKCDIELSETSVWVGWPDAGC*LVKEWL
Trigger: CAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGG...CCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACACTTCTGCCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
3UTR-3UTR TCA 90 bp TGGTCTCAAACTTGGCACACTGTCGGGGACACCCTGGGCACCAAACAAAAGCTGAGTGTGACATTGAATTaGGTGAGACGAGCGTGTGGG +
Preference number: 2 (lower is better)
Translates to: WSQTWHTVGDTLGTKQKLSVTLN*VRRACG
Trigger: CCCACACGCTCGTCTCACTCAATTCAATGTCACACT...CAGCTTTTGTTTGGTGCCCAGGGTGTCCCCGACAGTGTGCCAAGTTTGAGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494400.5
3UTR-3UTR GCA 90 bp AAAATGGTCTCAAACTTGGCACACTGTCGGGGACACCCTGGGCACCAAACAAAATCTCCTGACGCAGGCTaGTGGCTTGTCAAGGAATGG +
Preference number: 2 (lower is better)
Translates to: KMVSNLAHCRGHPGHQTKSPDAG*WLVKEW
Trigger: CCATTCCTTGACAAGCCAGCAGCCTGCGTCAGGAGA...TTTTGTTTGGTGCCCAGGGTGTCCCCGACAGTGTGCCAAGTTTGAGACCATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000494400.5
3UTR CAA 90 bp ATGAGTTACTCCTGGACTGAACTAAAGACTCCAAGTCCCATCCACTaGTGGGGACCCAGGACTGGATGGCTAAGGGACAGAAAAGGATGG +
Preference number: 2 (lower is better)
Translates to: MSYSWTELKTPSPIH*WGPRTGWLRDRKGW
Trigger: CCATCCTTTTCTGTCCCTTAGCCATCCAGTCCTGGGTCCCCACAAGTGGATGGGACTTGGAGTCTTTAGTTCAGTCCAGGAGTAACTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396153.7
3UTR-3UTR GCA 90 bp CAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTGTTTACTTTTTTCCAGCAATTTTaGAAGAGGCAGAAGTGTGAC +
Preference number: 2 (lower is better)
Translates to: QAAGLSRNGWFHRWAVFTFFQQF*KRQKCD
Trigger: GTCACACTTCTGCCTCTTGCAAAATTGCTGGAAAAA...AGTAAACACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000494400.5
3UTR-3UTR CCA 90 bp AGCAGTCCAAGAACACAAGGGAGTAAACTGGAATGGGGGATGACAAAGAGTCCTGGGGGTAGGGGAGGGTaGCAGAGTTGTAATTCTCTG +
Preference number: 2 (lower is better)
Translates to: SSPRTQGSKLEWGMTKSPGGRGG*QSCNSL
Trigger: CAGAGAATTACAACTCTGCCACCCTCCCCTACCCCC...AGGACTCTTTGTCATCCCCCATTCCAGTTTACTCCCTTGTGTTCTTGGACTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000396153.7
3UTR-3UTR TCA 90 bp AGCAGTCCAAGAACACAAGGGAGTAAACTGGAATGGGGGATGACAAAGAGTCCTGGGAGCTGGTATCTGTaGGGTTCTAACTGCCCAAAT +
Preference number: 2 (lower is better)
Translates to: SSPRTQGSKLEWGMTKSPGSWYL*GSNCPN
Trigger: ATTTGGGCAGTTAGAACCTCACAGATACCAGCTCCC...AGGACTCTTTGTCATCCCCCATTCCAGTTTACTCCCTTGTGTTCTTGGACTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396153.7
3UTR-3UTR CCA 90 bp CAAATGAAAAAGTCTATACTTTGGGGGAAATTTGCCAGAGCTCTCCACCTCTTATTGTCAAGGAATGGCTaGTTCCACCGCTGGGCCGTG +
Preference number: 2 (lower is better)
Translates to: QMKKSILWGKFARALHLLLSRNG*FHRWAV
Trigger: CACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAA...TAAGAGGTGGAGAGCTCTGGCAAATTTCCCCCAAAGTATAGACTTTTTCATTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000396153.7
3UTR-3UTR CCA 90 bp CCTCCAATAATGATTTATTTGGGTCCAGTTGAGTTACCCAAGTTTATTCAGCATAGACGAGCGTGTGGGTaGGTTGGCGAGGAGCCCTTC +
Preference number: 2 (lower is better)
Translates to: PPIMIYLGPVELPKFIQHRRACG*VGEEPF
Trigger: GAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCT...ATGCTGAATAAACTTGGGTAACTCAACTGGACCCAAATAAATCATTATTGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494400.5
3UTR-3UTR CCA 90 bp CCAATAATGATTTATTTGGGTCCAGTTGAGTTACCCAAGTTTATTCAGCATTCAAGCGTGTGGGTGGGTTaGCGAGGAGCCCTTCTCCTG +
Preference number: 2 (lower is better)
Translates to: PIMIYLGPVELPKFIQHSSVWVG*RGALLL
Trigger: CAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCT...TGAATGCTGAATAAACTTGGGTAACTCAACTGGACCCAAATAAATCATTATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494400.5
3UTR-3UTR CCA 90 bp CAAATGAAAAAGTCTATACTTTGGGGGAAATTTGCCAGAGCTCTCCACCTCTTACTCCTAGGTAGAACCTaGAGACCCAAGGCAGCAGCA +
Preference number: 2 (lower is better)
Translates to: QMKKSILWGKFARALHLLLLGRT*RPKAAA
Trigger: TGCTGCTGCCTTGGGTCTCCAGGTTCTACCTAGGAG...TAAGAGGTGGAGAGCTCTGGCAAATTTCCCCCAAAGTATAGACTTTTTCATTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000396153.7
3UTR CAA 90 bp GTTCCTTATTACAGGAGAGTCCATGGGGCTGCTCATCAGATTTTGTaGATAGGCAAGGTGCTTAAACACCAAGTGACAAGGTCCAAATGT +
Preference number: 2 (lower is better)
Translates to: VPYYRRVHGAAHQIL*IGKVLKHQVTRSKC
Trigger: ACATTTGGACCTTGTCACTTGGTGTTTAAGCACCTTGCCTATCAACAAAATCTGATGAGCAGCCCCATGGACTCTCCTGTAATAAGGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396153.7
3UTR CAA 90 bp CAAGTTCCTTATTACAGGAGAGTCCATGGGGCTGCTCATCAGATTTaGTTGATAGGCAAGGTGCTTAAACACCAAGTGACAAGGTCCAAA +
Preference number: 2 (lower is better)
Translates to: QVPYYRRVHGAAHQI*LIGKVLKHQVTRSK
Trigger: TTTGGACCTTGTCACTTGGTGTTTAAGCACCTTGCCTATCAACAAAATCTGATGAGCAGCCCCATGGACTCTCCTGTAATAAGGAACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396153.7
3UTR-3UTR TCA 90 bp TTGTTGATAGGCAAGGTGCTTAAACACCAAGTGACAAGGTCCAAATGTGTGAGGTGGCCTCTCTGCACATaGTCTCAACATTCACATTGT +
Preference number: 2 (lower is better)
Translates to: LLIGKVLKHQVTRSKCVRWPLCT*SQHSHC
Trigger: ACAATGTGAATGTTGAGATCATGTGCAGAGAGGCCA...CCTCACACATTTGGACCTTGTCACTTGGTGTTTAAGCACCTTGCCTATCAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
3UTR-3UTR TCA 90 bp AGCAGTCCAAGAACACAAGGGAGTAAACTGGAATGGGGGATGACAAAGAGTCCTTTTTCAGCCACAGAATaGGATCCCTTTCATTTGAGT +
Preference number: 2 (lower is better)
Translates to: SSPRTQGSKLEWGMTKSPFSATE*DPFHLS
Trigger: ACTCAAATGAAAGGGATCTCATTCTGTGGCTGAAAA...AGGACTCTTTGTCATCCCCCATTCCAGTTTACTCCCTTGTGTTCTTGGACTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000396153.7
3UTR-3UTR TCA 90 bp CTCTCATTCATCTTTGATTCTGGATGCTTACAATCCAGAGATGAACATCTGTGTCAGTTTGAACTCCCCTaGACACTTCCCCTGAAGGGA +
Preference number: 2 (lower is better)
Translates to: LSFIFDSGCLQSRDEHLCQFELP*TLPLKG
Trigger: TCCCTTCAGGGGAAGTGTTCAGGGGAGTTCAAACTG...ACACAGATGTTCATCTCTGGATTGTAAGCATCCAGAATCAAAGATGAATGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396153.7
3UTR-3UTR GCA 90 bp AGCAGTCCAAGAACACAAGGGAGTAAACTGGAATGGGGGATGACAAAGAGTCCTTTTTTCCAGCAATTTTaGAAGAGGCAGAAGTGTGAC +
Preference number: 2 (lower is better)
Translates to: SSPRTQGSKLEWGMTKSPFFQQF*KRQKCD
Trigger: GTCACACTTCTGCCTCTTGCAAAATTGCTGGAAAAA...AGGACTCTTTGTCATCCCCCATTCCAGTTTACTCCCTTGTGTTCTTGGACTGCT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000396153.7
3UTR-3UTR TCA 90 bp AGCAGTCCAAGAACACAAGGGAGTAAACTGGAATGGGGGATGACAAAGAGTCCTATAAATCATTGGCTGTaGAGGTATAAACGGTGTTCT +
Preference number: 2 (lower is better)
Translates to: SSPRTQGSKLEWGMTKSPINHWL*RYKRCS
Trigger: AGAACACCGTTTATACCTTCACAGCCAATGATTTAT...AGGACTCTTTGTCATCCCCCATTCCAGTTTACTCCCTTGTGTTCTTGGACTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396153.7
3UTR-3UTR CCA 90 bp CTCTCATTCATCTTTGATTCTGGATGCTTACAATCCAGAGATGAACATCTGTGTGATGGACTAGCAACTTaGGAGCTGGTATCTGTGAGG +
Preference number: 2 (lower is better)
Translates to: LSFIFDSGCLQSRDEHLCDGLAT*ELVSVR
Trigger: CCTCACAGATACCAGCTCCCAAGTTGCTAGTCCATC...ACACAGATGTTCATCTCTGGATTGTAAGCATCCAGAATCAAAGATGAATGAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
3UTR CAA 90 bp AAAAGCTGTAACCTTCTCCTTGCAGTGGTATCCTTGATGGTGGCTTaGGTCACTATACTATTAAATGACAATATAAGTGGGGAAGGCCCA +
Preference number: 2 (lower is better)
Translates to: KSCNLLLAVVSLMVA*VTILLNDNISGEGP
Trigger: TGGGCCTTCCCCACTTATATTGTCATTTAATAGTATAGTGACCAAAGCCACCATCAAGGATACCACTGCAAGGAGAAGGTTACAGCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494400.5
3UTR-3UTR TCA 90 bp CTCTCATTCATCTTTGATTCTGGATGCTTACAATCCAGAGATGAACATCTGTGTGCAACACATGTCTTCTaGGTTGAGTCCCCAAGTTTG +
Preference number: 2 (lower is better)
Translates to: LSFIFDSGCLQSRDEHLCATHVF*VESPSL
Trigger: CAAACTTGGGGACTCAACTCAGAAGACATGTGTTGC...ACACAGATGTTCATCTCTGGATTGTAAGCATCCAGAATCAAAGATGAATGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396153.7
3UTR-3UTR TCA 90 bp CCTCCAATAATGATTTATTTGGGTCCAGTTGAGTTACCCAAGTTTATTCAGCATTTGCAGTGGTATCCTTaGTGGTGGCTTTGGTCACTA +
Preference number: 2 (lower is better)
Translates to: PPIMIYLGPVELPKFIQHLQWYP*WWLWSL
Trigger: TAGTGACCAAAGCCACCATCAAGGATACCACTGCAA...ATGCTGAATAAACTTGGGTAACTCAACTGGACCCAAATAAATCATTATTGGAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494400.5
3UTR-3UTR CCA 90 bp CTCTCATTCATCTTTGATTCTGGATGCTTACAATCCAGAGATGAACATCTGTGTGATGACAAAGAGTCCTaGAGCTTCACTGTCAACAGT +
Preference number: 2 (lower is better)
Translates to: LSFIFDSGCLQSRDEHLCDDKES*SFTVNS
Trigger: ACTGTTGACAGTGAAGCTCCAGGACTCTTTGTCATC...ACACAGATGTTCATCTCTGGATTGTAAGCATCCAGAATCAAAGATGAATGAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
3UTR CAA 90 bp TGGGCACCAAACAAAAGCTGTAACCTTCTCCTTGCAGTGGTATCCTaGATGGTGGCTTTGGTCACTATACTATTAAATGACAATATAAGT +
Preference number: 2 (lower is better)
Translates to: WAPNKSCNLLLAVVS*MVALVTILLNDNIS
Trigger: ACTTATATTGTCATTTAATAGTATAGTGACCAAAGCCACCATCAAGGATACCACTGCAAGGAGAAGGTTACAGCTTTTGTTTGGTGCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494400.5
3UTR-3UTR TCA 90 bp CTCTCATTCATCTTTGATTCTGGATGCTTACAATCCAGAGATGAACATCTGTGTTCCTCAAACAAAACCTaGCATCTTAGTAAAGCCATC +
Preference number: 2 (lower is better)
Translates to: LSFIFDSGCLQSRDEHLCSSNKT*HLSKAI
Trigger: GATGGCTTTACTAAGATGTCAGGTTTTGTTTGAGGA...ACACAGATGTTCATCTCTGGATTGTAAGCATCCAGAATCAAAGATGAATGAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396153.7
3UTR-3UTR CCA 90 bp CAAATGAAAAAGTCTATACTTTGGGGGAAATTTGCCAGAGCTCTCCACCTCTTAGGAAAAGATGGGCACTaGAGAGGTAAAAATTCTATT +
Preference number: 2 (lower is better)
Translates to: QMKKSILWGKFARALHLLGKDGH*RGKNSI
Trigger: AATAGAATTTTTACCTCTCCAGTGCCCATCTTTTCC...TAAGAGGTGGAGAGCTCTGGCAAATTTCCCCCAAAGTATAGACTTTTTCATTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000396153.7
3UTR CAA 90 bp AAAGGGTTTCTTGAGGGAACAACTTTACCTCCAATAATGATTTATTaGGGTCCAGTTGAGTTACCCAAGTTTATTCAGCATTCATGGCAA +
Preference number: 2 (lower is better)
Translates to: KGFLEGTTLPPIMIY*GPVELPKFIQHSWQ
Trigger: TTGCCATGAATGCTGAATAAACTTGGGTAACTCAACTGGACCCAAATAAATCATTATTGGAGGTAAAGTTGTTCCCTCAAGAAACCCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494400.5
3UTR-3UTR CAA 90 bp CCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTGAGCGTGTGGGTGGGTaGGCGAGGAGCCCTTCTCCT +
Preference number: 3 (lower is better)
Translates to: PDAGCWLVKEWLVPPLGRERVGG*ARSPSP
Trigger: AGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTC...ACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
3UTR CCA 72 bp GACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTaGCGAGGAGCCCTTCTCCTGACGCAGGCTGCTGGC +
Preference number: 3 (lower is better)
Translates to: DIELSETSVWVG*RGALLLTQAAG
Trigger: GCCAGCAGCCTGCGTCAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
3UTR TCA 72 bp CCACCCACACCCCTGCTGCTGTTCCTGAGTATGACCTaGGTTCAGGGCTGCAGCTTCTTCACAGCAGCTACA +
Preference number: 3 (lower is better)
Translates to: PPTPLLLFLSMT*VQGCSFFTAAT
Trigger: TGTAGCTGCTGTGAAGAAGCTGCAGCCCTGAACTCAGGTCATACTCAGGAACAGCAGCAGGGGTGTGGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396153.7
3UTR CCA 72 bp CAGAAGTGTGACATTGAATTGAGTGAGACGAGCGTGTaGGTGGGTTGGCGAGGAGCCCTTCTCCTGACGCAG +
Preference number: 3 (lower is better)
Translates to: QKCDIELSETSV*VGWRGALLLTQ
Trigger: CTGCGTCAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACACTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
3UTR CCA 72 bp CTCCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTaGTTCCACCGCTGGGCCGTGTTTACTCTTTTGCTT +
Preference number: 3 (lower is better)
Translates to: LLTQAAGLSRNG*FHRWAVFTLLL
Trigger: AAGCAAAAGAGTAAACACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494400.5
3UTR CCA 72 bp CCTTCTCCTGACGCAGGCTGCTGGCTTGTCAAGGAATaGCTGGTTCCACCGCTGGGCCGTGTTTACTCTTTT +
Preference number: 3 (lower is better)
Translates to: PSPDAGCWLVKE*LVPPLGRVYSF
Trigger: AAAAGAGTAAACACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGGAGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494400.5
3UTR-3UTR CAA 90 bp CAGAAGTGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAACGCAGGCTGCTGGCTaGTCAAGGAATGGCTGGTTC +
Preference number: 3 (lower is better)
Translates to: QKCDIELSETSVWVGWRGTQAAG*SRNGWF
Trigger: GAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGT...TCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACACTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
3UTR TCA 72 bp GAAGTGTTCAGTTTGAACTCCCCTGAACACTTCCCCTaGAGGGAGACCCATGGGTCTCTCAGCCTCCCTAGA +
Preference number: 3 (lower is better)
Translates to: EVFSLNSPEHFP*RETHGSLSLPR
Trigger: TCTAGGGAGGCTGAGAGACCCATGGGTCTCCCTTCAGGGGAAGTGTTCAGGGGAGTTCAAACTGAACACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396153.7
3UTR CCA 72 bp GCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTaGGCCGTGTTTACTCTTTTGCTTCAAGGAAAAGGG +
Preference number: 3 (lower is better)
Translates to: AAGLSRNGWFHR*AVFTLLLQGKG
Trigger: CCCTTTTCCTTGAAGCAAAAGAGTAAACACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494400.5
3UTR TCA 72 bp ATAGAGCTGGAGAGAAGTGTTCAGTTTGAACTCCCCTaGACACTTCCCCTGAAGGGAGACCCATGGGTCTCT +
Preference number: 3 (lower is better)
Translates to: IELERSVQFELP*TLPLKGDPWVS
Trigger: AGAGACCCATGGGTCTCCCTTCAGGGGAAGTGTTCAGGGGAGTTCAAACTGAACACTTCTCTCCAGCTCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396153.7
3UTR CCA 72 bp AATGGTCTCAAACTTGGCACACTGTCGGGGACACCCTaGGCACCAAACAAAAGCTGTAACCTTCTCCTTGCA +
Preference number: 3 (lower is better)
Translates to: NGLKLGTLSGTP*APNKSCNLLLA
Trigger: TGCAAGGAGAAGGTTACAGCTTTTGTTTGGTGCCCAGGGTGTCCCCGACAGTGTGCCAAGTTTGAGACCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494400.5
3UTR-3UTR CAA 90 bp TTGTTGATAGGCAAGGTGCTTAAACACCAAGTGACAAGGTCCAAATGTGTGAGGACGCAGGCTGCTGGCTaGTCAAGGAATGGCTGGTTC +
Preference number: 3 (lower is better)
Translates to: LLIGKVLKHQVTRSKCVRTQAAG*SRNGWF
Trigger: GAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGT...CCTCACACATTTGGACCTTGTCACTTGGTGTTTAAGCACCTTGCCTATCAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
3UTR TCA 72 bp GAAGATAGGAATAGAGCTGGAGAGAAGTGTTCAGTTTaGACTCCCCTGAACACTTCCCCTGAAGGGAGACCC +
Preference number: 3 (lower is better)
Translates to: EDRNRAGEKCSV*TPLNTSPEGRP
Trigger: GGGTCTCCCTTCAGGGGAAGTGTTCAGGGGAGTTCAAACTGAACACTTCTCTCCAGCTCTATTCCTATCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396153.7
3UTR TCA 72 bp GTCCAAGAACACAAGGGAGTAAACTGGAATGGGGGATaGCAAAGAGTCCTGGAGCTTCACTGTCAACAGTTG +
Preference number: 3 (lower is better)
Translates to: VQEHKGVNWNGG*QRVLELHCQQL
Trigger: CAACTGTTGACAGTGAAGCTCCAGGACTCTTTGTCATCCCCCATTCCAGTTTACTCCCTTGTGTTCTTGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396153.7
3UTR CCA 72 bp CACATTGTGTGCTTGAACAGTTTCCCTATGCTGCAATaGAACAGCAAATACCTCCTAGGTAGAACCTGGAGA +
Preference number: 3 (lower is better)
Translates to: HIVCLNSFPMLQ*NSKYLLGRTWR
Trigger: TCTCCAGGTTCTACCTAGGAGGTATTTGCTGTTCCATTGCAGCATAGGGAAACTGTTCAAGCACACAATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
3UTR TCA 72 bp TATAATGTGCAATGCCTATATGAGTTACTCCTGGACTaGACTAAAGACTCCAAGTCCCATCCACTTGTGGGG +
Preference number: 3 (lower is better)
Translates to: YNVQCLYELLLD*TKDSKSHPLVG
Trigger: CCCCACAAGTGGATGGGACTTGGAGTCTTTAGTTCAGTCCAGGAGTAACTCATATAGGCATTGCACATTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
3UTR CCA 72 bp CTGCAATGGAACAGCAAATACCTCCTAGGTAGAACCTaGAGACCCAAGGCAGCAGCAGTAAATAAATATCTT +
Preference number: 3 (lower is better)
Translates to: LQWNSKYLLGRT*RPKAAAVNKYL
Trigger: AAGATATTTATTTACTGCTGCTGCCTTGGGTCTCCAGGTTCTACCTAGGAGGTATTTGCTGTTCCATTGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
3UTR-3UTR CAA 90 bp ACCCAAGTTTATTCAGCATTCATGGCAAATCTGGATTCTTCATTCCTAGCCTATCTTGCAGTGGTATCCTaGATGGTGGCTTTGGTCACT +
Preference number: 3 (lower is better)
Translates to: TQVYSAFMANLDSSFLAYLAVVS*MVALVT
Trigger: AGTGACCAAAGCCACCATCAAGGATACCACTGCAAG...ATAGGCTAGGAATGAAGAATCCAGATTTGCCATGAATGCTGAATAAACTTGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494400.5
3UTR GCA 72 bp AGGCAACACATGTCTTCTGAGTTGAGTCCCCAAGTTTaGTCTCTTCAACATATGAAGTCTGATTTTTCAGCC +
Preference number: 3 (lower is better)
Translates to: RQHMSSELSPQV*SLQHMKSDFSA
Trigger: GGCTGAAAAATCAGACTTCATATGTTGAAGAGAGCAAACTTGGGGACTCAACTCAGAAGACATGTGTTGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396153.7
3UTR-3UTR CAA 90 bp CTCTCATTCATCTTTGATTCTGGATGCTTACAATCCAGAGATGAACATCTGTGTAGTAGCCTCTTGCCATaGGGCCAGATACTGAAGTTT +
Preference number: 3 (lower is better)
Translates to: LSFIFDSGCLQSRDEHLCSSLLP*GQILKF
Trigger: AAACTTCAGTATCTGGCCCAATGGCAAGAGGCTACT...ACACAGATGTTCATCTCTGGATTGTAAGCATCCAGAATCAAAGATGAATGAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
3UTR TCA 72 bp GGGCTGAGTAGGCCAAAAGAACTTTCTAAGGCAGGTTaGAAAAGGTTGTATCAACTTCACACACATTCAAGT +
Preference number: 3 (lower is better)
Translates to: GLSRPKELSKAG*KRLYQLHTHSS
Trigger: ACTTGAATGTGTGTGAAGTTGATACAACCTTTTTCAACCTGCCTTAGAAAGTTCTTTTGGCCTACTCAGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396153.7
3UTR-3UTR CAA 90 bp ATAATGATTTATTTGGGTCCAGTTGAGTTACCCAAGTTTATTCAGCATTCATGGAAAATGGTCTCAAACTaGGCACACTGTCGGGGACAC +
Preference number: 3 (lower is better)
Translates to: IMIYLGPVELPKFIQHSWKMVSN*AHCRGH
Trigger: GTGTCCCCGACAGTGTGCCAAGTTTGAGACCATTTT...CCATGAATGCTGAATAAACTTGGGTAACTCAACTGGACCCAAATAAATCATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494400.5
3UTR CCA 72 bp GGGAGGGAACAATATAATGAAGAAACCCAAGTCAGATaGAACAGGTTAAACATGAAGGTGAATTCAGAGTAC +
Preference number: 3 (lower is better)
Translates to: GREQYNEETQVR*NRLNMKVNSEY
Trigger: GTACTCTGAATTCACCTTCATGTTTAACCTGTTCCATCTGACTTGGGTTTCTTCATTATATTGTTCCCTCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CCA 90 bp CCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTCCATGTTGGACGCCATaGCGGCCGCCGAGTTCCGCG +
Preference number: 4 (lower is better)
Translates to: PDAGCWLVKEWLVPPLGRPCWTP*RPPSSA
Trigger: CGCGGAACTCGGCGGCCGCCATGGCGTCCAACATGG...ACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CCA 90 bp CTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTGTCTCCCGGTCCATGTTaGACGCCATGGCGGCCGCCG +
Preference number: 4 (lower is better)
Translates to: LTQAAGLSRNGWFHRWAVSPGPC*TPWRPP
Trigger: CGGCGGCCGCCATGGCGTCCAACATGGACCGGGAGA...CACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CCA 90 bp GAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGACGCAGGCTGCTAGCGTGTGGGTGGGTTaGCGAGGAGCCCTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: ETSVWVGWRGALLLTQAASVWVG*RGALLL
Trigger: CAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCT...AGCAGCCTGCGTCAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CCA 90 bp GAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGACGCAGGCTGCTAGACGAGCGTGTGGGTaGGTTGGCGAGGAGCCCTTC +
Preference number: 4 (lower is better)
Translates to: ETSVWVGWRGALLLTQAARRACG*VGEEPF
Trigger: GAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCT...AGCAGCCTGCGTCAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CCA 90 bp CTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTGAGTGAGACGAGCGTGTaGGTGGGTTGGCGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: LTQAAGLSRNGWFHRWAVSETSV*VGWRGA
Trigger: GGCTCCTCGCCAACCCACCCACACGCTCGTCTCACT...CACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CCA 90 bp CTTCTCCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGAGCGAAGCGCGCACCTaGGAGGCAGACGGCACCTCC +
Preference number: 4 (lower is better)
Translates to: LLLTQAAGLSRNGWFHRWSEART*EADGTS
Trigger: GGAGGTGCCGTCTGCCTCCCAGGTGCGCGCTTCGCT...CCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGGAGAAG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR TCA 90 bp GAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGACGCAGGCTGCTCCTGAACACTTCCCCTaGAGGGAGACCCATGGGTCT +
Preference number: 4 (lower is better)
Translates to: ETSVWVGWRGALLLTQAAPEHFP*RETHGS
Trigger: AGACCCATGGGTCTCCCTTCAGGGGAAGTGTTCAGG...AGCAGCCTGCGTCAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR GCA 90 bp GAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGACGCAGGCTGCTTCAGGAGGCAGGGCTTaGTCTAAGGACAGCCGGATG +
Preference number: 4 (lower is better)
Translates to: ETSVWVGWRGALLLTQAASGGRA*SKDSRM
Trigger: CATCCGGCTGTCCTTAGAGCAAGCCCTGCCTCCTGA...AGCAGCCTGCGTCAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR GCA 90 bp GAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGACGCAGGCTGCTCAATCTGGAGCTTGTTaGTGGCCAGGAAACGCCGCT +
Preference number: 4 (lower is better)
Translates to: ETSVWVGWRGALLLTQAAQSGAC*WPGNAA
Trigger: AGCGGCGTTTCCTGGCCAGCAACAAGCTCCAGATTG...AGCAGCCTGCGTCAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CCA 90 bp CTCCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCTCTGGAGCTTGTTGCTaGCCAGGAAACGCCGCTCCA +
Preference number: 4 (lower is better)
Translates to: LLTQAAGLSRNGWFHRWASGACC*PGNAAP
Trigger: TGGAGCGGCGTTTCCTGGCCAGCAACAAGCTCCAGA...GGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CCA 90 bp CTCCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCTTGTCAAGGAATGGCTaGTTCCACCGCTGGGCCGTG +
Preference number: 4 (lower is better)
Translates to: LLTQAAGLSRNGWFHRWALSRNG*FHRWAV
Trigger: CACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAA...GGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CCA 90 bp GAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGACGAGCGTGTGGGTGGGTTaGCGAGGAGCCCTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: ELSETSVWVGWRGALLLTSVWVG*RGALLL
Trigger: CAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCT...CGTCAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CCA 90 bp CTTCTCCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGAGACGAGCGTGTGGGTaGGTTGGCGAGGAGCCCTTC +
Preference number: 4 (lower is better)
Translates to: LLLTQAAGLSRNGWFHRWRRACG*VGEEPF
Trigger: GAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCT...CCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGGAGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CCA 90 bp CCTTCTCCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGAGACGAGCGTGTGGGTaGGTTGGCGAGGAGCCCTTC +
Preference number: 4 (lower is better)
Translates to: PSPDAGCWLVKEWLVPPLRRACG*VGEEPF
Trigger: GAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCT...CAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGGAGAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CCA 90 bp CCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTCCCGGACAGGAAGATTaGTCTGGATGTGGGTCCGGT +
Preference number: 4 (lower is better)
Translates to: PDAGCWLVKEWLVPPLGRPGQED*SGCGSG
Trigger: ACCGGACCCACATCCAGACCAATCTTCCTGTCCGGG...ACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR TCA 90 bp CTCCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGCCATCTCTCTCTCGTaGGCTTCCCTCTTTGCTCTG +
Preference number: 4 (lower is better)
Translates to: LLTQAAGLSRNGWFHRWAAISLS*ASLFAL
Trigger: CAGAGCAAAGAGGGAAGCTCACGAGAGAGAGATGGC...GGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR TCA 90 bp CTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTGCCGGGTCTGTGCAGGTaGAGATCTTCTTCCCACTGT +
Preference number: 4 (lower is better)
Translates to: LTQAAGLSRNGWFHRWAVPGLCR*RSSSHC
Trigger: ACAGTGGGAAGAAGATCTTCACCTGCACAGACCCGG...CACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396153.7
ENST00000494400.5
CDS-3UTR TCA 90 bp CTCCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCCCGGGTCTGTGCAGGTaGAGATCTTCTTCCCACTGT +
Preference number: 4 (lower is better)
Translates to: LLTQAAGLSRNGWFHRWAPGLCR*RSSSHC
Trigger: ACAGTGGGAAGAAGATCTTCACCTGCACAGACCCGG...GGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396153.7
ENST00000494400.5
CDS-3UTR GCA 90 bp CCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTCAATCTGGAGCTTGTTaGTGGCCAGGAAACGCCGCT +
Preference number: 4 (lower is better)
Translates to: PDAGCWLVKEWLVPPLGRQSGAC*WPGNAA
Trigger: AGCGGCGTTTCCTGGCCAGCAACAAGCTCCAGATTG...ACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR GCA 90 bp AGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGACGCAGGCTTCTCCTGACGCAGGCTaGTGGCTTGTCAAGGAATGG +
Preference number: 4 (lower is better)
Translates to: SETSVWVGWRGALLLTQASPDAG*WLVKEW
Trigger: CCATTCCTTGACAAGCCAGCAGCCTGCGTCAGGAGA...AGCCTGCGTCAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR GCA 90 bp CTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTGTCTCCTGACGCAGGCTaGTGGCTTGTCAAGGAATGG +
Preference number: 4 (lower is better)
Translates to: LTQAAGLSRNGWFHRWAVSPDAG*WLVKEW
Trigger: CCATTCCTTGACAAGCCAGCAGCCTGCGTCAGGAGA...CACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CCA 90 bp CTTCTCCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGCCAAGAACTCGCCACTaGGGGTCCGGATCCGCAGTT +
Preference number: 4 (lower is better)
Translates to: LLLTQAAGLSRNGWFHRWPRTRH*GSGSAV
Trigger: AACTGCGGATCCGGACCCCCAGTGGCGAGTTCTTGG...CCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGGAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CCA 90 bp CCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTGGCTGGTTCCACCGCTaGGCCGTGTTTACTCTTTTG +
Preference number: 4 (lower is better)
Translates to: PDAGCWLVKEWLVPPLGRGWFHR*AVFTLL
Trigger: CAAAAGAGTAAACACGGCCCAGCGGTGGAACCAGCC...ACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CCA 90 bp CTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTGGGGGGTAGGGGAGGGTaGCAGAGTTGTAATTCTCTG +
Preference number: 4 (lower is better)
Translates to: LTQAAGLSRNGWFHRWAVGGRGG*QSCNSL
Trigger: CAGAGAATTACAACTCTGCCACCCTCCCCTACCCCC...CACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CCA 90 bp GAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGACGGTAACCCTGGCACTTTaGGAGGCTGAGGTGGGCCGA +
Preference number: 4 (lower is better)
Translates to: ELSETSVWVGWRGALLLTVTLAL*EAEVGR
Trigger: TCGGCCCACCTCAGCCTCCCAAAGTGCCAGGGTTAC...CGTCAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR TCA 90 bp AGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGACGCAGGCTAGAGGAAGTAGGAGCTaGAGCTGGATGACTTGCTGG +
Preference number: 4 (lower is better)
Translates to: SETSVWVGWRGALLLTQARGSRS*SWMTCW
Trigger: CCAGCAAGTCATCCAGCTTCAGCTCCTACTTCCTCT...AGCCTGCGTCAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371778.5
ENST00000396153.7
CDS-3UTR TCA 90 bp GAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGACGCAGGCTGCTCTCTGTATTCAACCCTaGAGTCCAGCATCCGAGGTT +
Preference number: 4 (lower is better)
Translates to: ETSVWVGWRGALLLTQAALCIQP*SPASEV
Trigger: AACCTCGGATGCTGGACTTCAGGGTTGAATACAGAG...AGCAGCCTGCGTCAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371778.5
ENST00000396153.7
CDS-3UTR TCA 90 bp CCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTCCTGTTGTTGGGCTGTaGAGATCTCCATTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: PDAGCWLVKEWLVPPLGRPVVGL*RSPLQP
Trigger: TGGCTGCAATGGAGATCTTCACAGCCCAACAACAGG...ACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR TCA 90 bp CAGAAGTGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAAGTCGCGGGCCAGGATaGGGGCAGGTTGCGACAGCG +
Preference number: 4 (lower is better)
Translates to: QKCDIELSETSVWVGWRGSRGPG*GQVATA
Trigger: CGCTGTCGCAACCTGCCCTCATCCTGGCCCGCGACT...TCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACACTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR TCA 90 bp CCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTCAGTTTGAACTCCCCTaGACACTTCCCCTGAAGGGA +
Preference number: 4 (lower is better)
Translates to: PDAGCWLVKEWLVPPLGRQFELP*TLPLKG
Trigger: TCCCTTCAGGGGAAGTGTTCAGGGGAGTTCAAACTG...ACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR TCA 90 bp GAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGACGGGCAGGAGAACTGCTTaGGCCCAGGAGATGGAGGTT +
Preference number: 4 (lower is better)
Translates to: ELSETSVWVGWRGALLLTGRRTA*AQEMEV
Trigger: AACCTCCATCTCCTGGGCTCAAGCAGTTCTCCTGCC...CGTCAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR GCA 90 bp GAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGACGCCAGGAGATGGAGGTTaGAGTGAGCCGAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: ELSETSVWVGWRGALLLTPGDGG*SEPRSC
Trigger: GCACGATCTCGGCTCACTGCAACCTCCATCTCCTGG...CGTCAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CCA 90 bp CTTCTCCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGTCTGGAGCTTGTTGCTaGCCAGGAAACGCCGCTCCA +
Preference number: 4 (lower is better)
Translates to: LLLTQAAGLSRNGWFHRWSGACC*PGNAAP
Trigger: TGGAGCGGCGTTTCCTGGCCAGCAACAAGCTCCAGA...CCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGGAGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CCA 90 bp GAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGACGTGGCTTGTCAAGGAATaGCTGGTTCCACCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: ELSETSVWVGWRGALLLTWLVKE*LVPPLG
Trigger: GCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCA...CGTCAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CCA 90 bp CTTCTCCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGCCTGACGCAGGCTGCTaGCTTGTCAAGGAATGGCTG +
Preference number: 4 (lower is better)
Translates to: LLLTQAAGLSRNGWFHRWPDAGC*LVKEWL
Trigger: CAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGG...CCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGGAGAAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CCA 90 bp ATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGAGTGAGACGAGCGTGTaGGTGGGTTGGCGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: IELSETSVWVGWRGALLLSETSV*VGWRGA
Trigger: GGCTCCTCGCCAACCCACCCACACGCTCGTCTCACT...CAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTCAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CCA 90 bp GAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGACGCAGGCTGCTCCCTCCCATAATTGGTaGCGAACGGGGATACTTGTA +
Preference number: 4 (lower is better)
Translates to: ETSVWVGWRGALLLTQAAPSHNW*RTGILV
Trigger: TACAAGTATCCCCGTTCGCCACCAATTATGGGAGGG...AGCAGCCTGCGTCAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CCA 90 bp AGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGACGCAGGCTCAGCCCTCCCATAATTaGTGGCGAACGGGGATACTT +
Preference number: 4 (lower is better)
Translates to: SETSVWVGWRGALLLTQAQPSHN*WRTGIL
Trigger: AAGTATCCCCGTTCGCCACCAATTATGGGAGGGCTG...AGCCTGCGTCAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CCA 90 bp CTCCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCAAAGAGGTGGTGCCCTaGTGCATCTGTAGCACTGGA +
Preference number: 4 (lower is better)
Translates to: LLTQAAGLSRNGWFHRWAKEVVP*CICSTG
Trigger: TCCAGTGCTACAGATGCACCAGGGCACCACCTCTTT...GGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR TCA 90 bp CTCCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCATGCCAGTACATGCCTaGAAATCCGCCAGGATCATC +
Preference number: 4 (lower is better)
Translates to: LLTQAAGLSRNGWFHRWAMPVHA*KSARII
Trigger: GATGATCCTGGCGGATTTTCAGGCATGTACTGGCAT...GGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371778.5
ENST00000396153.7
CDS-3UTR TCA 90 bp CTTCTCCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCATCTCTCTCTCGTaGGCTTCCCTCTTTGCTCTG +
Preference number: 4 (lower is better)
Translates to: LLLTQAAGLSRNGWFHRWAISLS*ASLFAL
Trigger: CAGAGCAAAGAGGGAAGCTCACGAGAGAGAGATGGC...CCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGGAGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR TCA 90 bp CCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTAGTGTGACATTGAATTaGGTGAGACGAGCGTGTGGG +
Preference number: 4 (lower is better)
Translates to: PDAGCWLVKEWLVPPLGRSVTLN*VRRACG
Trigger: CCCACACGCTCGTCTCACTCAATTCAATGTCACACT...ACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR TCA 90 bp CCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTCAATGCATTCGTCATTaGAGGAGGGTGAAGTGCAGG +
Preference number: 4 (lower is better)
Translates to: PDAGCWLVKEWLVPPLGRQCIRH*RRVKCR
Trigger: CCTGCACTTCACCCTCCTTCAATGACGAATGCATTG...ACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR TCA 90 bp CCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTCATTGGGCCAGATACTaGAGTTTTGGTACTGGCCTC +
Preference number: 4 (lower is better)
Translates to: PDAGCWLVKEWLVPPLGRHWARY*SFGTGL
Trigger: GAGGCCAGTACCAAAACTTCAGTATCTGGCCCAATG...ACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR GCA 90 bp CAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTGTTTACTTCAGGAGGCAGGGCTTaGTCTAAGGACAGCCGGATG +
Preference number: 4 (lower is better)
Translates to: QAAGLSRNGWFHRWAVFTSGGRA*SKDSRM
Trigger: CATCCGGCTGTCCTTAGAGCAAGCCCTGCCTCCTGA...AGTAAACACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494400.5
CDS-3UTR GCA 90 bp GAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGACGTCTCCTGACGCAGGCTaGTGGCTTGTCAAGGAATGG +
Preference number: 4 (lower is better)
Translates to: ELSETSVWVGWRGALLLTSPDAG*WLVKEW
Trigger: CCATTCCTTGACAAGCCAGCAGCCTGCGTCAGGAGA...CGTCAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR GCA 90 bp AGCAGTCCAAGAACACAAGGGAGTAAACTGGAATGGGGGATGACAAAGAGTCCTCGCCCGCCTGCAACCTaGGGAGCCCGCGTCGCAGCA +
Preference number: 4 (lower is better)
Translates to: SSPRTQGSKLEWGMTKSPRPPAT*GARVAA
Trigger: TGCTGCGACGCGGGCTCCGCAGGTTGCAGGCGGGCG...AGGACTCTTTGTCATCCCCCATTCCAGTTTACTCCCTTGTGTTCTTGGACTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR GCA 90 bp CCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTTGGAATCATCATCTCTaGCCTGCTTCCCTCATAGCG +
Preference number: 4 (lower is better)
Translates to: PDAGCWLVKEWLVPPLGRWNHHL*PASLIA
Trigger: CGCTATGAGGGAAGCAGGGCAGAGATGATGATTCCA...ACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CCA 90 bp GAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGACGGGCTGGTTCCACCGCTaGGCCGTGTTTACTCTTTTG +
Preference number: 4 (lower is better)
Translates to: ELSETSVWVGWRGALLLTGWFHR*AVFTLL
Trigger: CAAAAGAGTAAACACGGCCCAGCGGTGGAACCAGCC...CGTCAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CCA 90 bp CTTCTCCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGAGGTTGTACTCCCGCTaGACTTCTCGGTGGGTGATG +
Preference number: 4 (lower is better)
Translates to: LLLTQAAGLSRNGWFHRWRLYSR*TSRWVM
Trigger: CATCACCCACCGAGAAGTCCAGCGGGAGTACAACCT...CCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGGAGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CCA 90 bp CCTTCTCCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGCTCCTAGGTAGAACCTaGAGACCCAAGGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: PSPDAGCWLVKEWLVPPLLLGRT*RPKAAA
Trigger: TGCTGCTGCCTTGGGTCTCCAGGTTCTACCTAGGAG...CAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGGAGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CCA 90 bp CTCCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGATGGACTAGCAACTTaGGAGCTGGTATCTGTGAGG +
Preference number: 4 (lower is better)
Translates to: LLTQAAGLSRNGWFHRWADGLAT*ELVSVR
Trigger: CCTCACAGATACCAGCTCCCAAGTTGCTAGTCCATC...GGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CCA 90 bp CCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTATCTGGAGAGGTCCCTaGTTGGAGCATCAGAGAAGA +
Preference number: 4 (lower is better)
Translates to: PDAGCWLVKEWLVPPLGRIWRGP*LEHQRR
Trigger: TCTTCTCTGATGCTCCAACCAGGGACCTCTCCAGAT...ACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CCA 90 bp CCTTCTCCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGTGGGGACCCAGGACTaGATGGCTAAGGGACAGAAA +
Preference number: 4 (lower is better)
Translates to: PSPDAGCWLVKEWLVPPLVGTQD*MAKGQK
Trigger: TTTCTGTCCCTTAGCCATCCAGTCCTGGGTCCCCAC...CAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGGAGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CCA 90 bp CTCCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGCAGTCGCACTATCATaGCTCACTGTAGCCTTGAAC +
Preference number: 4 (lower is better)
Translates to: LLTQAAGLSRNGWFHRWAAVALS*LTVALN
Trigger: GTTCAAGGCTACAGTGAGCCATGATAGTGCGACTGC...GGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR TCA 90 bp CTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTGGCAATCACCATATCTTaGAGAAAACTCCTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: LTQAAGLSRNGWFHRWAVAITIS*RKLLQG
Trigger: GCCCTGCAGGAGTTTTCTTCAAGATATGGTGATTGC...CACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371778.5
CDS-3UTR TCA 90 bp CCTTCTCCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGCCTGTTGTTGGGCTGTaGAGATCTCCATTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: PSPDAGCWLVKEWLVPPLPVVGL*RSPLQP
Trigger: TGGCTGCAATGGAGATCTTCACAGCCCAACAACAGG...CAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGGAGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR TCA 90 bp AGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGACGCAGGCTGTCCTGAGTGAACAGTaGCAATTAGCTGAGGCCTTT +
Preference number: 4 (lower is better)
Translates to: SETSVWVGWRGALLLTQAVLSEQ*QLAEAF
Trigger: AAAGGCCTCAGCTAATTGTCACTGTTCACTCAGGAC...AGCCTGCGTCAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR GCA 90 bp CTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTGAGTCCGAATGGTTTGTaGCACAACACTGCCAAAGTG +
Preference number: 4 (lower is better)
Translates to: LTQAAGLSRNGWFHRWAVSPNGL*HNTAKV
Trigger: CACTTTGGCAGTGTTGTGGCACAAACCATTCGGACT...CACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CCA 90 bp CCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTAGCTGGATGACTTGCTaGATTAAATGCAGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: PDAGCWLVKEWLVPPLGRSWMTC*IKCRSW
Trigger: CCAGGACCTGCATTTAATCCAGCAAGTCATCCAGCT...ACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371778.5
ENST00000396153.7
CDS-3UTR CCA 90 bp AGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGACGCAGGCTTACAATCTGCCTGGATaGCATTACAGGTCGAAACGC +
Preference number: 4 (lower is better)
Translates to: SETSVWVGWRGALLLTQAYNLPG*HYRSKR
Trigger: GCGTTTCGACCTGTAATGCCATCCAGGCAGATTGTA...AGCCTGCGTCAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371778.5
ENST00000396153.7
CDS-3UTR CCA 90 bp TGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCCCCTTGGCCGAGGCTaGGGGAACAAACCCAGCATT +
Preference number: 4 (lower is better)
Translates to: CDIELSETSVWVGWRGALPLGRG*GNKPSI
Trigger: AATGCTGGGTTTGTTCCCCCAGCCTCGGCCAAGGGG...AAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CCA 90 bp CCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTCATGTTTCCCCATCCTaGAAAGTCCTGGAATGTCTC +
Preference number: 4 (lower is better)
Translates to: PDAGCWLVKEWLVPPLGRHVSPS*KVLECL
Trigger: GAGACATTCCAGGACTTTCCAGGATGGGGAAACATG...ACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494400.5
CDS-3UTR CCA 90 bp CAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTGTTTACTCTGTCGGGGACACCCTaGGCACCAAACAAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: QAAGLSRNGWFHRWAVFTLSGTP*APNKSC
Trigger: ACAGCTTTTGTTTGGTGCCCAGGGTGTCCCCGACAG...AGTAAACACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494400.5
CDS-3UTR TCA 90 bp CAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTGTTTACTTCTGTCAGCCTCAAGTaGAAGGCGATAGGCCTCATC +
Preference number: 4 (lower is better)
Translates to: QAAGLSRNGWFHRWAVFTSVSLK*KAIGLI
Trigger: GATGAGGCCTATCGCCTTTCACTTGAGGCTGACAGA...AGTAAACACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494400.5
CDS-3UTR TCA 90 bp CTTCTCCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGAGTGTGACATTGAATTaGGTGAGACGAGCGTGTGGG +
Preference number: 4 (lower is better)
Translates to: LLLTQAAGLSRNGWFHRWSVTLN*VRRACG
Trigger: CCCACACGCTCGTCTCACTCAATTCAATGTCACACT...CCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGGAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR TCA 90 bp CTCCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCTGGCCTCTCTGCACATaGTCTCAACATTCACATTGT +
Preference number: 4 (lower is better)
Translates to: LLTQAAGLSRNGWFHRWAWPLCT*SQHSHC
Trigger: ACAATGTGAATGTTGAGATCATGTGCAGAGAGGCCA...GGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR TCA 90 bp AGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGACGCAGGCTGTGTTCAGTTTACACTaGTGGACTAGCAACTTGGGA +
Preference number: 4 (lower is better)
Translates to: SETSVWVGWRGALLLTQAVFSLH*WTSNLG
Trigger: TCCCAAGTTGCTAGTCCATCAGTGTAAACTGAACAC...AGCCTGCGTCAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR TCA 90 bp CCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTCAACTTGGAAGACACTaGAGTCTCTGGAATGTGTGT +
Preference number: 4 (lower is better)
Translates to: PDAGCWLVKEWLVPPLGRQLGRH*SLWNVC
Trigger: ACACACATTCCAGAGACTTCAGTGTCTTCCAAGTTG...ACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR GCA 90 bp CCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTTTCAATGCCAGTACATaGCTGAAAATCCGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: PDAGCWLVKEWLVPPLGRFNAST*LKIRQD
Trigger: ATCCTGGCGGATTTTCAGGCATGTACTGGCATTGAA...ACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371778.5
ENST00000396153.7
CDS-3UTR GCA 90 bp CTCCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCACTTGCTGGATTAAATaGAGGTCCTGGTATGGTCTC +
Preference number: 4 (lower is better)
Translates to: LLTQAAGLSRNGWFHRWATCWIK*RSWYGL
Trigger: GAGACCATACCAGGACCTGCATTTAATCCAGCAAGT...GGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371778.5
ENST00000396153.7
CDS-3UTR GCA 90 bp CCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTTGCCTTTCTACAATCTaGCTGGATGGCATTACAGGT +
Preference number: 4 (lower is better)
Translates to: PDAGCWLVKEWLVPPLGRCLSTI*LDGITG
Trigger: ACCTGTAATGCCATCCAGGCAGATTGTAGAAAGGCA...ACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371778.5
ENST00000396153.7
CDS-3UTR GCA 90 bp GAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGACGTCCAGCATCCGAGGTTaGCTTTCTACAATCTGCCTG +
Preference number: 4 (lower is better)
Translates to: ELSETSVWVGWRGALLLTSSIRG*LSTICL
Trigger: CAGGCAGATTGTAGAAAGGCAACCTCGGATGCTGGA...CGTCAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371778.5
ENST00000396153.7
CDS-3UTR GCA 90 bp GAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGACGTCCGGATCCGCAGTTTaGTCACAGGCTCAGCATTTT +
Preference number: 4 (lower is better)
Translates to: ELSETSVWVGWRGALLLTSGSAV*SQAQHF
Trigger: AAAATGCTGAGCCTGTGAGCAAACTGCGGATCCGGA...CGTCAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CCA 90 bp CTCCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCAAATCAAAGACAATCTaGAGCTTGTTGCTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LLTQAAGLSRNGWFHRWAKSKTI*SLLLAR
Trigger: CCTGGCCAGCAACAAGCTCCAGATTGTCTTTGATTT...GGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CCA 90 bp GAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGACGCAGGCTGCTCTTGTACTCATCCCATaGAAATCCTTTGGAAGCTAC +
Preference number: 4 (lower is better)
Translates to: ETSVWVGWRGALLLTQAALVLIP*KSFGSY
Trigger: GTAGCTTCCAAAGGATTTCCATGGGATGAGTACAAG...AGCAGCCTGCGTCAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CCA 90 bp AAGAGGCAGAAGTGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGAGTGAGACGAGCGTGTaGGTGGGTTGGCGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: KRQKCDIELSETSVWVGWSETSV*VGWRGA
Trigger: GGCTCCTCGCCAACCCACCCACACGCTCGTCTCACT...CCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACACTTCTGCCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CCA 90 bp CCTTCTCCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGACAGGAAGATTGGTCTaGATGTGGGTCCGGTCTTAC +
Preference number: 4 (lower is better)
Translates to: PSPDAGCWLVKEWLVPPLTGRLV*MWVRSY
Trigger: GTAAGACCGGACCCACATCCAGACCAATCTTCCTGT...CAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGGAGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CCA 90 bp CCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTCCCCTTGTGCAAAAATaGAATCATCATCTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: PDAGCWLVKEWLVPPLGRPLVQK*NHHLCP
Trigger: AGGGCAGAGATGATGATTCCATTTTTGCACAAGGGG...ACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR TCA 90 bp AGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGACGCAGGCTTCTCCATTGCAGCCATaGGTCTCATCATTAACTCAT +
Preference number: 4 (lower is better)
Translates to: SETSVWVGWRGALLLTQASPLQP*VSSLTH
Trigger: ATGAGTTAATGATGAGACTCATGGCTGCAATGGAGA...AGCCTGCGTCAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR TCA 90 bp ATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGCCTGTTGTTGGGCTGTaGAGATCTCCATTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: IELSETSVWVGWRGALLLPVVGL*RSPLQP
Trigger: TGGCTGCAATGGAGATCTTCACAGCCCAACAACAGG...CAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR TCA 90 bp ATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGTCTGTCAGCCTCAAGTaGAAGGCGATAGGCCTCATC +
Preference number: 4 (lower is better)
Translates to: IELSETSVWVGWRGALLLSVSLK*KAIGLI
Trigger: GATGAGGCCTATCGCCTTTCACTTGAGGCTGACAGA...CAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR TCA 90 bp TGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTGCCATCTCTCTCTCGTaGGCTTCCCTCTTTGCTCTG +
Preference number: 4 (lower is better)
Translates to: CDIELSETSVWVGWRGALAISLS*ASLFAL
Trigger: CAGAGCAAAGAGGGAAGCTCACGAGAGAGAGATGGC...AAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR TCA 90 bp CTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTGAATAGTACTGCTTCCTaGGAAGTTCAGGTTGTACTC +
Preference number: 4 (lower is better)
Translates to: LTQAAGLSRNGWFHRWAVNSTAS*EVQVVL
Trigger: GAGTACAACCTGAACTTCTCAGGAAGCAGTACTATT...CACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396153.7
ENST00000494400.5
CDS-3UTR TCA 90 bp GAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGACGCAGGCTGCTTTTCTCTTTACCTCTTaGATAGTACTGCTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: ETSVWVGWRGALLLTQAAFLFTS*IVLLPE
Trigger: CTCAGGAAGCAGTACTATTCAAGAGGTAAAGAGAAA...AGCAGCCTGCGTCAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396153.7
ENST00000494400.5
CDS-3UTR TCA 90 bp CTCCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCCTTTGGCCTTTTGTCTaGAGCTTAGTAGACCATCAT +
Preference number: 4 (lower is better)
Translates to: LLTQAAGLSRNGWFHRWALWPFV*SLVDHH
Trigger: ATGATGGTCTACTAAGCTTCAGACAAAAGGCCAAAG...GGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR TCA 90 bp AGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGACGCAGGCTCAAGGAACTCAGAGATaGACAAGTTCTAGCTTGCTT +
Preference number: 4 (lower is better)
Translates to: SETSVWVGWRGALLLTQAQGTQR*TSSSLL
Trigger: AAGCAAGCTAGAACTTGTTCATCTCTGAGTTCCTTG...AGCCTGCGTCAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494400.5
CDS-3UTR GCA 90 bp CCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTTTTGTGCCACAACACTaGCAAAGTGTCTATTGCACA +
Preference number: 4 (lower is better)
Translates to: PDAGCWLVKEWLVPPLGRFVPQH*QSVYCT
Trigger: TGTGCAATAGACACTTTGGCAGTGTTGTGGCACAAA...ACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR GCA 90 bp GAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGACGAGTCCGAATGGTTTGTaGCACAACACTGCCAAAGTG +
Preference number: 4 (lower is better)
Translates to: ELSETSVWVGWRGALLLTSPNGL*HNTAKV
Trigger: CACTTTGGCAGTGTTGTGGCACAAACCATTCGGACT...CGTCAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR GCA 90 bp CTTCTCCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGCAAACGAAACTGTTCTaGCATCTCTCTCTCGTGAGC +
Preference number: 4 (lower is better)
Translates to: LLLTQAAGLSRNGWFHRWQTKLF*HLSLVS
Trigger: GCTCACGAGAGAGAGATGGCAGAACAGTTTCGTTTG...CCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGGAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR GCA 90 bp CCTTCTCCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGCAAACGAAACTGTTCTaGCATCTCTCTCTCGTGAGC +
Preference number: 4 (lower is better)
Translates to: PSPDAGCWLVKEWLVPPLQTKLF*HLSLVS
Trigger: GCTCACGAGAGAGAGATGGCAGAACAGTTTCGTTTG...CAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGGAGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CCA 90 bp CCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTTCTTCACATTTTCTCTaGCTTCACGTTCATCCTCGT +
Preference number: 4 (lower is better)
Translates to: PDAGCWLVKEWLVPPLGRSSHFL*LHVHPR
Trigger: ACGAGGATGAACGTGAAGCCAGAGAAAATGTGAAGA...ACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CCA 90 bp CAGAAGTGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGATCTGGAGCTTGTTGCTaGCCAGGAAACGCCGCTCCA +
Preference number: 4 (lower is better)
Translates to: QKCDIELSETSVWVGWRGSGACC*PGNAAP
Trigger: TGGAGCGGCGTTTCCTGGCCAGCAACAAGCTCCAGA...TCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACACTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CCA 90 bp CCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTCTTGTACTCATCCCATaGAAATCCTTTGGAAGCTAC +
Preference number: 4 (lower is better)
Translates to: PDAGCWLVKEWLVPPLGRLVLIP*KSFGSY
Trigger: GTAGCTTCCAAAGGATTTCCATGGGATGAGTACAAG...ACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CCA 90 bp CTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTGTCAGTGATGCTGTTGTaGAGAGAATTAAGACCCTCT +
Preference number: 4 (lower is better)
Translates to: LTQAAGLSRNGWFHRWAVSVMLL*RELRPS
Trigger: AGAGGGTCTTAATTCTCTCCACAACAGCATCACTGA...CACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CCA 90 bp CTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTGAAGAGAGGTTCAACTTaGAAGACACTGAAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: LTQAAGLSRNGWFHRWAVKRGST*KTLKSL
Trigger: CAGAGACTTCAGTGTCTTCCAAGTTGAACCTCTCTT...CACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR TCA 90 bp GAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGACGAGGAAAAGGGTTTCTTaGGGGAACAACTTTACCTCC +
Preference number: 4 (lower is better)
Translates to: ELSETSVWVGWRGALLLTRKRVS*GNNFTS
Trigger: GGAGGTAAAGTTGTTCCCTCAAGAAACCCTTTTCCT...CGTCAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR TCA 90 bp CTTCTCCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGAGGAAAAGGGTTTCTTaGGGGAACAACTTTACCTCC +
Preference number: 4 (lower is better)
Translates to: LLLTQAAGLSRNGWFHRWRKRVS*GNNFTS
Trigger: GGAGGTAAAGTTGTTCCCTCAAGAAACCCTTTTCCT...CCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGGAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR TCA 90 bp TGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTTTGGTTAGAATCTTCTaGGAACCCCTTGGCCGAGGC +
Preference number: 4 (lower is better)
Translates to: CDIELSETSVWVGWRGALLVRIF*EPLGRG
Trigger: GCCTCGGCCAAGGGGTTCTCAGAAGATTCTAACCAA...AAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR TCA 90 bp AGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGACGCAGGCTGACTATTATGATGTGTaGAAGGTGTGTCCAATTGCA +
Preference number: 4 (lower is better)
Translates to: SETSVWVGWRGALLLTQADYYDV*KVCPIA
Trigger: TGCAATTGGACACACCTTTCACACATCATAATAGTC...AGCCTGCGTCAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR TCA 90 bp CAGAAGTGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGGTCAGGGCTGGTCTTaGACTTCTGGCCTCAAGCAA +
Preference number: 4 (lower is better)
Translates to: QKCDIELSETSVWVGWRGGQGWS*TSGLKQ
Trigger: TTGCTTGAGGCCAGAAGTTCAAGACCAGCCCTGACC...TCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACACTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR GCA 90 bp CTCCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCCATAGTGAGAAATCTTaGTCTGTTGGAGTCCTTTGT +
Preference number: 4 (lower is better)
Translates to: LLTQAAGLSRNGWFHRWAHSEKS*SVGVLC
Trigger: ACAAAGGACTCCAACAGAGCAAGATTTCTCACTATG...GGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR GCA 90 bp AAGAGGCAGAAGTGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGTCAGGAGGCAGGGCTTaGTCTAAGGACAGCCGGATG +
Preference number: 4 (lower is better)
Translates to: KRQKCDIELSETSVWVGWSGGRA*SKDSRM
Trigger: CATCCGGCTGTCCTTAGAGCAAGCCCTGCCTCCTGA...CCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACACTTCTGCCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR GCA 90 bp CCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTCCGTGTTTACTCTTTTaGTTCAAGGAAAAGGGTTTC +
Preference number: 4 (lower is better)
Translates to: PDAGCWLVKEWLVPPLGRPCLLF*FKEKGF
Trigger: GAAACCCTTTTCCTTGAAGCAAAAGAGTAAACACGG...ACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR GCA 90 bp GAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGACGCAGGCTGCTATGAACATCTGTGTGTaGTATAAAACTAGTAGTGCC +
Preference number: 4 (lower is better)
Translates to: ETSVWVGWRGALLLTQAAMNICV*YKTSSA
Trigger: GGCACTACTAGTTTTATAGCACACACAGATGTTCAT...AGCAGCCTGCGTCAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CCA 90 bp CTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTGGTGAGCAGAACACGTTaGTTAACACACTTTCATCAT +
Preference number: 4 (lower is better)
Translates to: LTQAAGLSRNGWFHRWAVVSRTR*LTHFHH
Trigger: ATGATGAAAGTGTGTTAACCAACGTGTTCTGCTCAC...CACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CCA 90 bp CTCCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCATATCTTCCTGTTGTTaGGCTGTGAAGATCTCCATT +
Preference number: 4 (lower is better)
Translates to: LLTQAAGLSRNGWFHRWAISSCC*AVKISI
Trigger: AATGGAGATCTTCACAGCCCAACAACAGGAAGATAT...GGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CCA 90 bp AGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGACGCAGGCTGTTTTCTGGCATCATTaGAGATTTTCTCAAGGCAGA +
Preference number: 4 (lower is better)
Translates to: SETSVWVGWRGALLLTQAVFWHH*RFSQGR
Trigger: TCTGCCTTGAGAAAATCTCCAATGATGCCAGAAAAC...AGCCTGCGTCAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CCA 90 bp ATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGTTAGAGACAGGGTCTTaGTATGTGGTCAGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: IELSETSVWVGWRGALLLLETGS*YVVRAG
Trigger: ACCAGCCCTGACCACATACCAAGACCCTGTCTCTAA...CAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR TCA 90 bp TGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCTGTATTCAACCCTaGAGTCCAGCATCCGAGGTT +
Preference number: 4 (lower is better)
Translates to: CDIELSETSVWVGWRGALLCIQP*SPASEV
Trigger: AACCTCGGATGCTGGACTTCAGGGTTGAATACAGAG...AAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371778.5
ENST00000396153.7
CDS-3UTR TCA 90 bp GAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGACGTCTCCATTGCAGCCATaGGTCTCATCATTAACTCAT +
Preference number: 4 (lower is better)
Translates to: ELSETSVWVGWRGALLLTSPLQP*VSSLTH
Trigger: ATGAGTTAATGATGAGACTCATGGCTGCAATGGAGA...CGTCAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR TCA 90 bp CTCCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGCAATCACCATATCTTaGAGAAAACTCTGCTGTAAA +
Preference number: 4 (lower is better)
Translates to: LLTQAAGLSRNGWFHRWAAITIS*RKLCCK
Trigger: TTTACAGCAGAGTTTTCTTCAAGATATGGTGATTGC...GGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396153.7
ENST00000494400.5
CDS-3UTR TCA 90 bp TGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTGGGAGCTGGTATCTGTaGGGTTCTAACTGCCCAAAT +
Preference number: 4 (lower is better)
Translates to: CDIELSETSVWVGWRGALGSWYL*GSNCPN
Trigger: ATTTGGGCAGTTAGAACCTCACAGATACCAGCTCCC...AAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR TCA 90 bp AGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGACGCAGGCTAAAAACCTATTCTACTaGCCAGCACACTTAGATGTT +
Preference number: 4 (lower is better)
Translates to: SETSVWVGWRGALLLTQAKNLFY*PAHLDV
Trigger: AACATCTAAGTGTGCTGGTCAGTAGAATAGGTTTTT...AGCCTGCGTCAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR TCA 90 bp AAGAGGCAGAAGTGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGACTCCTGGGCTCAAGTaGTCACTTTGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: KRQKCDIELSETSVWVGWTPGLK*SLCLSL
Trigger: GAGGCTGAGGCAAAGTGATCACTTGAGCCCAGGAGT...CCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACACTTCTGCCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR TCA 90 bp CTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTGTTATTTGGGTCCAGTTaGGTTACCCAAGTTTATTCA +
Preference number: 4 (lower is better)
Translates to: LTQAAGLSRNGWFHRWAVLFGSS*VTQVYS
Trigger: TGAATAAACTTGGGTAACTCAACTGGACCCAAATAA...CACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494400.5
CDS-3UTR GCA 90 bp GAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGACGTTTGTGCCACAACACTaGCAAAGTGTCTATTGCACA +
Preference number: 4 (lower is better)
Translates to: ELSETSVWVGWRGALLLTFVPQH*QSVYCT
Trigger: TGTGCAATAGACACTTTGGCAGTGTTGTGGCACAAA...CGTCAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR GCA 90 bp CTTCTCCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGTGTGAAGATCTCCATTaGAGCCATGAGTCTCATCAT +
Preference number: 4 (lower is better)
Translates to: LLLTQAAGLSRNGWFHRWCEDLH*SHESHH
Trigger: ATGATGAGACTCATGGCTGCAATGGAGATCTTCACA...CCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGGAGAAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR GCA 90 bp GAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGACGTGTGAAGATCTCCATTaGAGCCATGAGTCTCATCAT +
Preference number: 4 (lower is better)
Translates to: ELSETSVWVGWRGALLLTCEDLH*SHESHH
Trigger: ATGATGAGACTCATGGCTGCAATGGAGATCTTCACA...CGTCAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR GCA 90 bp TGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTTCCGGATCCGCAGTTTaGTCACAGGCTCAGCATTTT +
Preference number: 4 (lower is better)
Translates to: CDIELSETSVWVGWRGALSGSAV*SQAQHF
Trigger: AAAATGCTGAGCCTGTGAGCAAACTGCGGATCCGGA...AAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR GCA 90 bp CAGAAGTGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGAGGTGGTGCCCTGGTaGATCTGTAGCACTGGAAAT +
Preference number: 4 (lower is better)
Translates to: QKCDIELSETSVWVGWRGEVVPW*ICSTGN
Trigger: ATTTCCAGTGCTACAGATGCACCAGGGCACCACCTC...TCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACACTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CCA 90 bp CCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTAATGCCATTTTCCTGTaGTATTACACCATTGATAGC +
Preference number: 4 (lower is better)
Translates to: PDAGCWLVKEWLVPPLGRNAIFL*YYTIDS
Trigger: GCTATCAATGGTGTAATACCACAGGAAAATGGCATT...ACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371778.5
ENST00000396153.7
CDS-3UTR CCA 90 bp CTTCTCCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGATTAAATGCAGGTCCTaGTATGGTCTCACCTCCATA +
Preference number: 4 (lower is better)
Translates to: LLLTQAAGLSRNGWFHRWIKCRS*YGLTSI
Trigger: TATGGAGGTGAGACCATACCAGGACCTGCATTTAAT...CCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGGAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371778.5
ENST00000396153.7
CDS-3UTR CCA 90 bp CTTCTCCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGTTTCTACAATCTGCCTaGATGGCATTACAGGTCGAA +
Preference number: 4 (lower is better)
Translates to: LLLTQAAGLSRNGWFHRWFLQSA*MALQVE
Trigger: TTCGACCTGTAATGCCATCCAGGCAGATTGTAGAAA...CCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGGAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371778.5
ENST00000396153.7
CDS-3UTR CCA 90 bp AGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGACGCAGGCTCCCATGGAAATCCTTTaGAAGCTACAAAATCAAAGA +
Preference number: 4 (lower is better)
Translates to: SETSVWVGWRGALLLTQAPMEIL*KLQNQR
Trigger: TCTTTGATTTTGTAGCTTCCAAAGGATTTCCATGGG...AGCCTGCGTCAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CCA 90 bp AAGAGGCAGAAGTGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGGGCTGGTTCCACCGCTaGGCCGTGTTTACTCTTTTG +
Preference number: 4 (lower is better)
Translates to: KRQKCDIELSETSVWVGWGWFHR*AVFTLL
Trigger: CAAAAGAGTAAACACGGCCCAGCGGTGGAACCAGCC...CCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACACTTCTGCCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CCA 90 bp TGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCCCTCCCATAATTGGTaGCGAACGGGGATACTTGTA +
Preference number: 4 (lower is better)
Translates to: CDIELSETSVWVGWRGALPSHNW*RTGILV
Trigger: TACAAGTATCCCCGTTCGCCACCAATTATGGGAGGG...AAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CCA 90 bp GAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGACGCAGGCTGCTCTCTGTAATAAGGGTTaGGAATATATACTCATGGAT +
Preference number: 4 (lower is better)
Translates to: ETSVWVGWRGALLLTQAALCNKG*EYILMD
Trigger: ATCCATGAGTATATATTCCCAACCCTTATTACAGAG...AGCAGCCTGCGTCAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CCA 90 bp CCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTGGAAAAGATGGGCACTaGAGAGGTAAAAATTCTATT +
Preference number: 4 (lower is better)
Translates to: PDAGCWLVKEWLVPPLGRGKDGH*RGKNSI
Trigger: AATAGAATTTTTACCTCTCCAGTGCCCATCTTTTCC...ACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR TCA 90 bp AAGAGGCAGAAGTGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGAGAGGAAGTAGGAGCTaGAGCTGGATGACTTGCTGG +
Preference number: 4 (lower is better)
Translates to: KRQKCDIELSETSVWVGWRGSRS*SWMTCW
Trigger: CCAGCAAGTCATCCAGCTTCAGCTCCTACTTCCTCT...CCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACACTTCTGCCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371778.5
ENST00000396153.7
CDS-3UTR TCA 90 bp CCTTCTCCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGATCAGCATGAAGTTTTaGTTTAATGACTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PSPDAGCWLVKEWLVPPLISMKF*FNDSCR
Trigger: CCTGCAGGAGTCATTAAATCAAAACTTCATGCTGAT...CAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGGAGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396153.7
ENST00000494400.5
CDS-3UTR TCA 90 bp GAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGACGTTTCTCTTTACCTCTTaGATAGTACTGCTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: ELSETSVWVGWRGALLLTFLFTS*IVLLPE
Trigger: CTCAGGAAGCAGTACTATTCAAGAGGTAAAGAGAAA...CGTCAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396153.7
ENST00000494400.5
CDS-3UTR TCA 90 bp CCTTCTCCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGCTCTCTTCAACATATaGAGTCTGATTTTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: PSPDAGCWLVKEWLVPPLALFNI*SLIFQP
Trigger: TGGCTGAAAAATCAGACTTCATATGTTGAAGAGAGC...CAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGGAGAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR TCA 90 bp GAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGACGGCTCTCATTCATCTTTaGTTCTGGATGCTTACAATC +
Preference number: 4 (lower is better)
Translates to: ELSETSVWVGWRGALLLTALIHL*FWMLTI
Trigger: GATTGTAAGCATCCAGAATCAAAGATGAATGAGAGC...CGTCAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR TCA 90 bp TGGTCTCAAACTTGGCACACTGTCGGGGACACCCTGGGCACCAAACAAAAGCTGTTGCAGTGGTATCCTTaGTGGTGGCTTTGGTCACTA +
Preference number: 4 (lower is better)
Translates to: WSQTWHTVGDTLGTKQKLLQWYP*WWLWSL
Trigger: TAGTGACCAAAGCCACCATCAAGGATACCACTGCAA...CAGCTTTTGTTTGGTGCCCAGGGTGTCCCCGACAGTGTGCCAAGTTTGAGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494400.5
CDS-3UTR GCA 90 bp CCTTCTCCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGTTTTTCCAGCAATTTTaGAAGAGGCAGAAGTGTGAC +
Preference number: 4 (lower is better)
Translates to: PSPDAGCWLVKEWLVPPLFFQQF*KRQKCD
Trigger: GTCACACTTCTGCCTCTTGCAAAATTGCTGGAAAAA...CAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGGAGAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR GCA 90 bp AAGAGGCAGAAGTGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGTCATCATCTCTGCCCTaGTTCCCTCATAGCGGGAGA +
Preference number: 4 (lower is better)
Translates to: KRQKCDIELSETSVWVGWSSSLP*FPHSGR
Trigger: TCTCCCGCTATGAGGGAAGCAGGGCAGAGATGATGA...CCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACACTTCTGCCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CCA 90 bp ATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGAAATCAAAGACAATCTaGAGCTTGTTGCTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: IELSETSVWVGWRGALLLKSKTI*SLLLAR
Trigger: CCTGGCCAGCAACAAGCTCCAGATTGTCTTTGATTT...CAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CCA 90 bp CAGGGGGTAGGGGAGGGTGGCAGAGTTGTAATTCTCTGTAATAAGGGTTGGGAAAGATTGGTCTGGATGTaGGTCCGGTCTTACAGTCGC +
Preference number: 4 (lower is better)
Translates to: QGVGEGGRVVILCNKGWERLVWM*VRSYSR
Trigger: GCGACTGTAAGACCGGACCCACATCCAGACCAATCT...TTCCCAACCCTTATTACAGAGAATTACAACTCTGCCACCCTCCCCTACCCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CCA 90 bp TGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCACGCAGCTACTAAGTaGCAGAAGAGAGGTTCAACT +
Preference number: 4 (lower is better)
Translates to: CDIELSETSVWVGWRGALHAATK*QKRGST
Trigger: AGTTGAACCTCTCTTCTGCCACTTAGTAGCTGCGTG...AAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CCA 90 bp CAGGGGGTAGGGGAGGGTGGCAGAGTTGTAATTCTCTGTAATAAGGGTTGGGAAAAATTTAGAGATTCTTaGCCGGGCGCCGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: QGVGEGGRVVILCNKGWEKFRDS*PGAVAH
Trigger: GTGAGCCACGGCGCCCGGCCAAGAATCTCTAAATTT...TTCCCAACCCTTATTACAGAGAATTACAACTCTGCCACCCTCCCCTACCCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR TCA 90 bp AAGAGGCAGAAGTGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGATGCCAGTACATGCCTaGAAATCCGCCAGGATCATC +
Preference number: 4 (lower is better)
Translates to: KRQKCDIELSETSVWVGWMPVHA*KSARII
Trigger: GATGATCCTGGCGGATTTTCAGGCATGTACTGGCAT...CCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACACTTCTGCCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371778.5
ENST00000396153.7
CDS-3UTR TCA 90 bp GCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTGTTTACTCTTTTGTTTTCTCAAGGCAGATaGCGCCATGCCAAATACTTC +
Preference number: 4 (lower is better)
Translates to: AGLSRNGWFHRWAVFTLLFSQGR*RHAKYF
Trigger: GAAGTATTTGGCATGGCGTCATCTGCCTTGAGAAAA...CAAAAGAGTAAACACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494400.5
CDS-3UTR TCA 90 bp CAGAAGTGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAAGCAAATATTCAGACTaGCTCACTTACTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: QKCDIELSETSVWVGWRGSKYSD*LTYWAW
Trigger: CCAGGCCCAGTAAGTGAGTCAGTCTGAATATTTGCT...TCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACACTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR TCA 90 bp CTTCTCCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGAAGAGAAAATACAGGTaGAAGGGTTACACAGACTAT +
Preference number: 4 (lower is better)
Translates to: LLLTQAAGLSRNGWFHRWKRKYR*KGYTDY
Trigger: ATAGTCTGTGTAACCCTTTCACCTGTATTTTCTCTT...CCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR GCA 90 bp TGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTTTCAATGCCAGTACATaGCTGAAAATCCGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: CDIELSETSVWVGWRGALFNAST*LKIRQD
Trigger: ATCCTGGCGGATTTTCAGGCATGTACTGGCATTGAA...AAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371778.5
ENST00000396153.7
CDS-3UTR GCA 90 bp CAGAAGTGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAAGTCCGAATGGTTTGTaGCACAACACTGCCAAAGTG +
Preference number: 4 (lower is better)
Translates to: QKCDIELSETSVWVGWRGSPNGL*HNTAKV
Trigger: CACTTTGGCAGTGTTGTGGCACAAACCATTCGGACT...TCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACACTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR GCA 90 bp AAGAGGCAGAAGTGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGTCCGGATCCGCAGTTTaGTCACAGGCTCAGCATTTT +
Preference number: 4 (lower is better)
Translates to: KRQKCDIELSETSVWVGWSGSAV*SQAQHF
Trigger: AAAATGCTGAGCCTGTGAGCAAACTGCGGATCCGGA...CCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACACTTCTGCCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR GCA 90 bp GAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGACGAACATTCACATTGTGTaGTTGAACAGTTTCCCTATG +
Preference number: 4 (lower is better)
Translates to: ELSETSVWVGWRGALLLTNIHIV*LNSFPM
Trigger: CATAGGGAAACTGTTCAAGCACACAATGTGAATGTT...CGTCAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR GCA 90 bp CAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTGTTTACTGAACAAGTTCTAGCTTaGTTTACAGCTAGCTGCAAA +
Preference number: 4 (lower is better)
Translates to: QAAGLSRNGWFHRWAVFTEQVLA*FTASCK
Trigger: TTTGCAGCTAGCTGTAAAGCAAGCTAGAACTTGTTC...AGTAAACACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494400.5
CDS-3UTR CCA 90 bp CAGAAGTGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGATACAATCTGCCTGGATaGCATTACAGGTCGAAACGC +
Preference number: 4 (lower is better)
Translates to: QKCDIELSETSVWVGWRGYNLPG*HYRSKR
Trigger: GCGTTTCGACCTGTAATGCCATCCAGGCAGATTGTA...TCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACACTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371778.5
ENST00000396153.7
CDS-3UTR CCA 90 bp CAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTGTTTACTGTGAGCAGAACACGTTaGTTAACACACTTTCATCAT +
Preference number: 4 (lower is better)
Translates to: QAAGLSRNGWFHRWAVFTVSRTR*LTHFHH
Trigger: ATGATGAAAGTGTGTTAACCAACGTGTTCTGCTCAC...AGTAAACACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494400.5
CDS-3UTR CCA 90 bp TGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTAAATCAAAGACAATCTaGAGCTTGTTGCTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: CDIELSETSVWVGWRGALKSKTI*SLLLAR
Trigger: CCTGGCCAGCAACAAGCTCCAGATTGTCTTTGATTT...AAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CCA 90 bp GAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGACGCCCATGGAAATCCTTTaGAAGCTACAAAATCAAAGA +
Preference number: 4 (lower is better)
Translates to: ELSETSVWVGWRGALLLTPMEIL*KLQNQR
Trigger: TCTTTGATTTTGTAGCTTCCAAAGGATTTCCATGGG...CGTCAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CCA 90 bp CCTTCTCCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGCCCATGGAAATCCTTTaGAAGCTACAAAATCAAAGA +
Preference number: 4 (lower is better)
Translates to: PSPDAGCWLVKEWLVPPLPMEIL*KLQNQR
Trigger: TCTTTGATTTTGTAGCTTCCAAAGGATTTCCATGGG...CAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGGAGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CCA 90 bp AACAAAAGCTGTAACCTTCTCCTTGCAGTGGTATCCTTGATGGTGGCTTTGGTCTGGCTTGTCAAGGAATaGCTGGTTCCACCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: NKSCNLLLAVVSLMVALVWLVKE*LVPPLG
Trigger: GCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCA...GACCAAAGCCACCATCAAGGATACCACTGCAAGGAGAAGGTTACAGCTTTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494400.5
CDS-3UTR CCA 90 bp AAAATGGTCTCAAACTTGGCACACTGTCGGGGACACCCTGGGCACCAAACAAAACGCTGGACTTCTCGGTaGGTGATGATCAGCATGAAG +
Preference number: 4 (lower is better)
Translates to: KMVSNLAHCRGHPGHQTKRWTSR*VMISMK
Trigger: CTTCATGCTGATCATCACCCACCGAGAAGTCCAGCG...TTTTGTTTGGTGCCCAGGGTGTCCCCGACAGTGTGCCAAGTTTGAGACCATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000494400.5
CDS-3UTR CCA 90 bp AAGAGGCAGAAGTGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGAGCCTCAACAGTAGCTaGGACTACAGGCAAGTACCA +
Preference number: 4 (lower is better)
Translates to: KRQKCDIELSETSVWVGWSLNSS*DYRQVP
Trigger: TGGTACTTGCCTGTAGTCCCAGCTACTGTTGAGGCT...CCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACACTTCTGCCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR TCA 90 bp AAGAGGCAGAAGTGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGTACAGGTCGAAACGCTaGAGAAGAAGAGGAAGTAGG +
Preference number: 4 (lower is better)
Translates to: KRQKCDIELSETSVWVGWYRSKR*RRRGSR
Trigger: CCTACTTCCTCTTCTTCTTCAGCGTTTCGACCTGTA...CCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACACTTCTGCCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371778.5
ENST00000396153.7
CDS-3UTR TCA 90 bp CAGGGGGTAGGGGAGGGTGGCAGAGTTGTAATTCTCTGTAATAAGGGTTGGGAACAAGGTCCAAATGTGTaGGGGAGTAGAGAGAGAGAA +
Preference number: 4 (lower is better)
Translates to: QGVGEGGRVVILCNKGWEQGPNV*GSRERE
Trigger: TTCTCTCTCTCTACTCCCTCACACATTTGGACCTTG...TTCCCAACCCTTATTACAGAGAATTACAACTCTGCCACCCTCCCCTACCCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR TCA 90 bp ATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGTTTTCAGCCACAGAATaGGATCCCTTTCATTTGAGT +
Preference number: 4 (lower is better)
Translates to: IELSETSVWVGWRGALLLFSATE*DPFHLS
Trigger: ACTCAAATGAAAGGGATCTCATTCTGTGGCTGAAAA...CAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR TCA 90 bp AAGAGGCAGAAGTGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGACATGTCTTCTGAGTTaGGTCCCCAAGTTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: KRQKCDIELSETSVWVGWTCLLS*VPKFAL
Trigger: GAGAGCAAACTTGGGGACTCAACTCAGAAGACATGT...CCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACACTTCTGCCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR TCA 90 bp ATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGCTTACAATCCAGAGATaGACATCTGTGTGTGCTATA +
Preference number: 4 (lower is better)
Translates to: IELSETSVWVGWRGALLLLTIQR*TSVCAI
Trigger: TATAGCACACACAGATGTTCATCTCTGGATTGTAAG...CAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR TCA 90 bp AAGAGGCAGAAGTGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGTTCAAAATGCAACAGTaGGGAGCTGTGTGGCCAGTT +
Preference number: 4 (lower is better)
Translates to: KRQKCDIELSETSVWVGWFKMQQ*GAVWPV
Trigger: AACTGGCCACACAGCTCCTCACTGTTGCATTTTGAA...CCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACACTTCTGCCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR GCA 90 bp CAGAAGTGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAAGGCAGATGACGCCATaGCAAATACTTCTCCATCAT +
Preference number: 4 (lower is better)
Translates to: QKCDIELSETSVWVGWRGRQMTP*QILLHH
Trigger: ATGATGGAGAAGTATTTGGCATGGCGTCATCTGCCT...TCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACACTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396153.7
ENST00000494400.5
CDS-3UTR GCA 90 bp AAGAGGCAGAAGTGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGAACTGCAGAGGACACTaGTATTTCTGTGGTGATGGG +
Preference number: 4 (lower is better)
Translates to: KRQKCDIELSETSVWVGWNCRGH*YFCGDG
Trigger: CCCATCACCACAGAAATAGCAGTGTCCTCTGCAGTT...CCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACACTTCTGCCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CCA 90 bp TGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTAGGTGGTGGCAAATCTaGTGTAAGGACATAAAGACT +
Preference number: 4 (lower is better)
Translates to: CDIELSETSVWVGWRGALRWWQI*CKDIKT
Trigger: AGTCTTTATGTCCTTACACCAGATTTGCCACCACCT...AAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371778.5
ENST00000396153.7
CDS-3UTR CCA 90 bp TGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTTCTTCACATTTTCTCTaGCTTCACGTTCATCCTCGT +
Preference number: 4 (lower is better)
Translates to: CDIELSETSVWVGWRGALSSHFL*LHVHPR
Trigger: ACGAGGATGAACGTGAAGCCAGAGAAAATGTGAAGA...AAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CCA 90 bp AGCAGTCCAAGAACACAAGGGAGTAAACTGGAATGGGGGATGACAAAGAGTCCTCGCTGGACTTCTCGGTaGGTGATGATCAGCATGAAG +
Preference number: 4 (lower is better)
Translates to: SSPRTQGSKLEWGMTKSPRWTSR*VMISMK
Trigger: CTTCATGCTGATCATCACCCACCGAGAAGTCCAGCG...AGGACTCTTTGTCATCCCCCATTCCAGTTTACTCCCTTGTGTTCTTGGACTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CCA 90 bp CAGGGGGTAGGGGAGGGTGGCAGAGTTGTAATTCTCTGTAATAAGGGTTGGGAAGGGAGTAAACTGGAATaGGGGATGACAAAGAGTCCT +
Preference number: 4 (lower is better)
Translates to: QGVGEGGRVVILCNKGWEGSKLE*GMTKSP
Trigger: AGGACTCTTTGTCATCCCCCATTCCAGTTTACTCCC...TTCCCAACCCTTATTACAGAGAATTACAACTCTGCCACCCTCCCCTACCCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CCA 90 bp TGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTAGTAGTGCCAGAGAATaGCAACATCCGAAATCAGAA +
Preference number: 4 (lower is better)
Translates to: CDIELSETSVWVGWRGALSSARE*QHPKSE
Trigger: TTCTGATTTCGGATGTTGCCATTCTCTGGCACTACT...AAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR GCA 90 bp CAGAAGTGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGATGTGAAGATCTCCATTaGAGCCATGAGTCTCATCAT +
Preference number: 4 (lower is better)
Translates to: QKCDIELSETSVWVGWRGCEDLH*SHESHH
Trigger: ATGATGAGACTCATGGCTGCAATGGAGATCTTCACA...TCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACACTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR GCA 90 bp TGGTCTCAAACTTGGCACACTGTCGGGGACACCCTGGGCACCAAACAAAAGCTGCCGTGTTTACTCTTTTaGTTCAAGGAAAAGGGTTTC +
Preference number: 4 (lower is better)
Translates to: WSQTWHTVGDTLGTKQKLPCLLF*FKEKGF
Trigger: GAAACCCTTTTCCTTGAAGCAAAAGAGTAAACACGG...CAGCTTTTGTTTGGTGCCCAGGGTGTCCCCGACAGTGTGCCAAGTTTGAGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000494400.5
CDS-3UTR GCA 90 bp CTCTCATTCATCTTTGATTCTGGATGCTTACAATCCAGAGATGAACATCTGTGTAGGATGAGGGCAGGTTaGGACAGCGCGCACCCGGAT +
Preference number: 4 (lower is better)
Translates to: LSFIFDSGCLQSRDEHLCRMRAG*DSAHPD
Trigger: ATCCGGGTGCGCGCTGTCGCAACCTGCCCTCATCCT...ACACAGATGTTCATCTCTGGATTGTAAGCATCCAGAATCAAAGATGAATGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR GCA 90 bp CAGGGGGTAGGGGAGGGTGGCAGAGTTGTAATTCTCTGTAATAAGGGTTGGGAAGAGAGTCCATGGGGCTaGTCATCAGATTTTGTTGAT +
Preference number: 4 (lower is better)
Translates to: QGVGEGGRVVILCNKGWEESPWG*SSDFVD
Trigger: ATCAACAAAATCTGATGAGCAGCCCCATGGACTCTC...TTCCCAACCCTTATTACAGAGAATTACAACTCTGCCACCCTCCCCTACCCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR GCA 90 bp ATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGGACTATAATGTGCAATaGCTATATGAGTTACTCCTG +
Preference number: 4 (lower is better)
Translates to: IELSETSVWVGWRGALLLDYNVQ*LYELLL
Trigger: CAGGAGTAACTCATATAGGCATTGCACATTATAGTC...CAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CCA 90 bp ATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGAATGCCATTTTCCTGTaGTATTACACCATTGATAGC +
Preference number: 4 (lower is better)
Translates to: IELSETSVWVGWRGALLLNAIFL*YYTIDS
Trigger: GCTATCAATGGTGTAATACCACAGGAAAATGGCATT...CAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371778.5
ENST00000396153.7
CDS-3UTR CCA 90 bp CAGAAGTGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGATTTCTACAATCTGCCTaGATGGCATTACAGGTCGAA +
Preference number: 4 (lower is better)
Translates to: QKCDIELSETSVWVGWRGFLQSA*MALQVE
Trigger: TTCGACCTGTAATGCCATCCAGGCAGATTGTAGAAA...TCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACACTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371778.5
ENST00000396153.7
CDS-3UTR CCA 90 bp CAAATGAAAAAGTCTATACTTTGGGGGAAATTTGCCAGAGCTCTCCACCTCTTACCAAGAACTCGCCACTaGGGGTCCGGATCCGCAGTT +
Preference number: 4 (lower is better)
Translates to: QMKKSILWGKFARALHLLPRTRH*GSGSAV
Trigger: AACTGCGGATCCGGACCCCCAGTGGCGAGTTCTTGG...TAAGAGGTGGAGAGCTCTGGCAAATTTCCCCCAAAGTATAGACTTTTTCATTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CCA 90 bp GTCTCAAACTTGGCACACTGTCGGGGACACCCTGGGCACCAAACAAAAGCTGTACTTGTACTCATCCCATaGAAATCCTTTGGAAGCTAC +
Preference number: 4 (lower is better)
Translates to: VSNLAHCRGHPGHQTKAVLVLIP*KSFGSY
Trigger: GTAGCTTCCAAAGGATTTCCATGGGATGAGTACAAG...TACAGCTTTTGTTTGGTGCCCAGGGTGTCCCCGACAGTGTGCCAAGTTTGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494400.5
CDS-3UTR CCA 90 bp AATGACAATATAAGTGGGGAAGGCCCAGAGGGGATTCTATTAAGAATGGAATGGTTGTCAAGGAATGGCTaGTTCCACCGCTGGGCCGTG +
Preference number: 4 (lower is better)
Translates to: NDNISGEGPEGILLRMEWLSRNG*FHRWAV
Trigger: CACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAA...CCATTCCATTCTTAATAGAATCCCCTCTGGGCCTTCCCCACTTATATTGTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494400.5
CDS-3UTR CCA 90 bp TATCAAATATACAGCATCCTGGTGTCACAGAACAGACAGAACTGTCCTAGACACCCTGACGCAGGCTGCTaGCTTGTCAAGGAATGGCTG +
Preference number: 4 (lower is better)
Translates to: YQIYSILVSQNRQNCPRHPDAGC*LVKEWL
Trigger: CAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGG...GTGTCTAGGACAGTTCTGTCTGTTCTGTGACACCAGGATGCTGTATATTTGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CCA 90 bp ACCCAAGTTTATTCAGCATTCATGGCAAATCTGGATTCTTCATTCCTAGCCTATAGCGTGTGGGTGGGTTaGCGAGGAGCCCTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: TQVYSAFMANLDSSFLAYSVWVG*RGALLL
Trigger: CAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCT...ATAGGCTAGGAATGAAGAATCCAGATTTGCCATGAATGCTGAATAAACTTGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494400.5
CDS-3UTR CCA 90 bp CAGGGGGTAGGGGAGGGTGGCAGAGTTGTAATTCTCTGTAATAAGGGTTGGGAATTACAGGAGAGTCCATaGGGCTGCTCATCAGATTTT +
Preference number: 4 (lower is better)
Translates to: QGVGEGGRVVILCNKGWELQESP*GCSSDF
Trigger: AAAATCTGATGAGCAGCCCCATGGACTCTCCTGTAA...TTCCCAACCCTTATTACAGAGAATTACAACTCTGCCACCCTCCCCTACCCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CCA 90 bp AAGAGGCAGAAGTGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGGATGACAAAGAGTCCTaGAGCTTCACTGTCAACAGT +
Preference number: 4 (lower is better)
Translates to: KRQKCDIELSETSVWVGWDDKES*SFTVNS
Trigger: ACTGTTGACAGTGAAGCTCCAGGACTCTTTGTCATC...CCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACACTTCTGCCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR TCA 90 bp AAGAGGCAGAAGTGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGTCTCCATTGCAGCCATaGGTCTCATCATTAACTCAT +
Preference number: 4 (lower is better)
Translates to: KRQKCDIELSETSVWVGWSPLQP*VSSLTH
Trigger: ATGAGTTAATGATGAGACTCATGGCTGCAATGGAGA...CCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACACTTCTGCCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR TCA 90 bp TTGTTGATAGGCAAGGTGCTTAAACACCAAGTGACAAGGTCCAAATGTGTGAGGTCTGTCAGCCTCAAGTaGAAGGCGATAGGCCTCATC +
Preference number: 4 (lower is better)
Translates to: LLIGKVLKHQVTRSKCVRSVSLK*KAIGLI
Trigger: GATGAGGCCTATCGCCTTTCACTTGAGGCTGACAGA...CCTCACACATTTGGACCTTGTCACTTGGTGTTTAAGCACCTTGCCTATCAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR TCA 90 bp AAAATGGTCTCAAACTTGGCACACTGTCGGGGACACCCTGGGCACCAAACAAAAAGGAAAAGGGTTTCTTaGGGGAACAACTTTACCTCC +
Preference number: 4 (lower is better)
Translates to: KMVSNLAHCRGHPGHQTKRKRVS*GNNFTS
Trigger: GGAGGTAAAGTTGTTCCCTCAAGAAACCCTTTTCCT...TTTTGTTTGGTGCCCAGGGTGTCCCCGACAGTGTGCCAAGTTTGAGACCATTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000494400.5
CDS-3UTR TCA 90 bp CAGGGGGTAGGGGAGGGTGGCAGAGTTGTAATTCTCTGTAATAAGGGTTGGGAAAATAGTACTGCTTCCTaGGAAGTTCAGGTTGTACTC +
Preference number: 4 (lower is better)
Translates to: QGVGEGGRVVILCNKGWENSTAS*EVQVVL
Trigger: GAGTACAACCTGAACTTCTCAGGAAGCAGTACTATT...TTCCCAACCCTTATTACAGAGAATTACAACTCTGCCACCCTCCCCTACCCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR GCA 90 bp TATCAAATATACAGCATCCTGGTGTCACAGAACAGACAGAACTGTCCTAGACACCAATCTGGAGCTTGTTaGTGGCCAGGAAACGCCGCT +
Preference number: 4 (lower is better)
Translates to: YQIYSILVSQNRQNCPRHQSGAC*WPGNAA
Trigger: AGCGGCGTTTCCTGGCCAGCAACAAGCTCCAGATTG...GTGTCTAGGACAGTTCTGTCTGTTCTGTGACACCAGGATGCTGTATATTTGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR GCA 90 bp ATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGATCTTTGATTCTGGATaGTTACAATCCAGAGATGAA +
Preference number: 4 (lower is better)
Translates to: IELSETSVWVGWRGALLLIFDSG*LQSRDE
Trigger: TTCATCTCTGGATTGTAAGCATCCAGAATCAAAGAT...CAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR GCA 90 bp AAGAGGCAGAAGTGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCCTCTAAGCCCCTTGTaGAAAAATGGAATCATCATC +
Preference number: 4 (lower is better)
Translates to: KRQKCDIELSETSVWVGWPLSPL*KNGIII
Trigger: GATGATGATTCCATTTTTGCACAAGGGGCTTAGAGG...CCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACACTTCTGCCTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CCA 90 bp TATCAAATATACAGCATCCTGGTGTCACAGAACAGACAGAACTGTCCTAGACACAGGTTGTACTCCCGCTaGACTTCTCGGTGGGTGATG +
Preference number: 4 (lower is better)
Translates to: YQIYSILVSQNRQNCPRHRLYSR*TSRWVM
Trigger: CATCACCCACCGAGAAGTCCAGCGGGAGTACAACCT...GTGTCTAGGACAGTTCTGTCTGTTCTGTGACACCAGGATGCTGTATATTTGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CCA 90 bp TATCAAATATACAGCATCCTGGTGTCACAGAACAGACAGAACTGTCCTAGACACCTCACTTACTGGGCCTaGAGGCTGGGATGTAAAGCC +
Preference number: 4 (lower is better)
Translates to: YQIYSILVSQNRQNCPRHLTYWA*RLGCKA
Trigger: GGCTTTACATCCCAGCCTCCAGGCCCAGTAAGTGAG...GTGTCTAGGACAGTTCTGTCTGTTCTGTGACACCAGGATGCTGTATATTTGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CCA 90 bp AGCAGTCCAAGAACACAAGGGAGTAAACTGGAATGGGGGATGACAAAGAGTCCTGTAGCCTTGAACTCCTaGGCTCAAGTGATCACTTTG +
Preference number: 4 (lower is better)
Translates to: SSPRTQGSKLEWGMTKSPVALNS*AQVITL
Trigger: CAAAGTGATCACTTGAGCCCAGGAGTTCAAGGCTAC...AGGACTCTTTGTCATCCCCCATTCCAGTTTACTCCCTTGTGTTCTTGGACTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CCA 90 bp AACAAAAGCTGTAACCTTCTCCTTGCAGTGGTATCCTTGATGGTGGCTTTGGTCAAATGGTCTCAAACTTaGCACACTGTCGGGGACACC +
Preference number: 4 (lower is better)
Translates to: NKSCNLLLAVVSLMVALVKWSQT*HTVGDT
Trigger: GGTGTCCCCGACAGTGTGCCAAGTTTGAGACCATTT...GACCAAAGCCACCATCAAGGATACCACTGCAAGGAGAAGGTTACAGCTTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494400.5
CDS-3UTR TCA 90 bp AGCAGTCCAAGAACACAAGGGAGTAAACTGGAATGGGGGATGACAAAGAGTCCTTTTTCTCAAGGCAGATaGCGCCATGCCAAATACTTC +
Preference number: 4 (lower is better)
Translates to: SSPRTQGSKLEWGMTKSPFSQGR*RHAKYF
Trigger: GAAGTATTTGGCATGGCGTCATCTGCCTTGAGAAAA...AGGACTCTTTGTCATCCCCCATTCCAGTTTACTCCCTTGTGTTCTTGGACTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR TCA 90 bp CAGAAGTGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCAATCACCATATCTTaGAGAAAACTCTGCTGTAAA +
Preference number: 4 (lower is better)
Translates to: QKCDIELSETSVWVGWRGAITIS*RKLCCK
Trigger: TTTACAGCAGAGTTTTCTTCAAGATATGGTGATTGC...TCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACACTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396153.7
ENST00000494400.5
CDS-3UTR TCA 90 bp TTGTTGATAGGCAAGGTGCTTAAACACCAAGTGACAAGGTCCAAATGTGTGAGGAACTGGAATGGGGGATaGCAAAGAGTCCTGGAGCTT +
Preference number: 4 (lower is better)
Translates to: LLIGKVLKHQVTRSKCVRNWNGG*QRVLEL
Trigger: AAGCTCCAGGACTCTTTGTCATCCCCCATTCCAGTT...CCTCACACATTTGGACCTTGTCACTTGGTGTTTAAGCACCTTGCCTATCAACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR TCA 90 bp CAGGGGGTAGGGGAGGGTGGCAGAGTTGTAATTCTCTGTAATAAGGGTTGGGAAAAATGTGTCAATCAGTaGTGCTGTTGTGGAGAGAAT +
Preference number: 4 (lower is better)
Translates to: QGVGEGGRVVILCNKGWEKCVNQ*CCCGEN
Trigger: ATTCTCTCCACAACAGCATCACTGATTGACACATTT...TTCCCAACCCTTATTACAGAGAATTACAACTCTGCCACCCTCCCCTACCCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR GCA 90 bp AAGAGGCAGAAGTGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCATAGTGAGAAATCTTaGTCTGTTGGAGTCCTTTGT +
Preference number: 4 (lower is better)
Translates to: KRQKCDIELSETSVWVGWHSEKS*SVGVLC
Trigger: ACAAAGGACTCCAACAGAGCAAGATTTCTCACTATG...CCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACACTTCTGCCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR GCA 90 bp AAGAGGCAGAAGTGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCCGTGTTTACTCTTTTaGTTCAAGGAAAAGGGTTTC +
Preference number: 4 (lower is better)
Translates to: KRQKCDIELSETSVWVGWPCLLF*FKEKGF
Trigger: GAAACCCTTTTCCTTGAAGCAAAAGAGTAAACACGG...CCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACACTTCTGCCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR GCA 90 bp AAGAGGCAGAAGTGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGTTTTTCCAGCAATTTTaGAAGAGGCAGAAGTGTGAC +
Preference number: 4 (lower is better)
Translates to: KRQKCDIELSETSVWVGWFFQQF*KRQKCD
Trigger: GTCACACTTCTGCCTCTTGCAAAATTGCTGGAAAAA...CCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACACTTCTGCCTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR GCA 90 bp CAGAAGTGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGATGTCCAATTGCAAAGTaGTATCAGAATGTTGTAAGG +
Preference number: 4 (lower is better)
Translates to: QKCDIELSETSVWVGWRGCPIAK*YQNVVR
Trigger: CCTTACAACATTCTGATAGCACTTTGCAATTGGACA...TCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACACTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR GCA 90 bp AAGAGGCAGAAGTGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGACCAAACTTTCAAAATaGAACAGTGAGGAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: KRQKCDIELSETSVWVGWTKLSK*NSEELC
Trigger: ACACAGCTCCTCACTGTTGCATTTTGAAAGTTTGGT...CCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACACTTCTGCCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR GCA 90 bp AACAAAAGCTGTAACCTTCTCCTTGCAGTGGTATCCTTGATGGTGGCTTTGGTCTGCTTTACAGCTAGCTaGAAAAACCCCAGGAGTACC +
Preference number: 4 (lower is better)
Translates to: NKSCNLLLAVVSLMVALVCFTAS*KNPRST
Trigger: GGTACTCCTGGGGTTTTTGCAGCTAGCTGTAAAGCA...GACCAAAGCCACCATCAAGGATACCACTGCAAGGAGAAGGTTACAGCTTTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000494400.5
CDS-3UTR CCA 90 bp AAGAGGCAGAAGTGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGGTGAGCAGAACACGTTaGTTAACACACTTTCATCAT +
Preference number: 4 (lower is better)
Translates to: KRQKCDIELSETSVWVGWVSRTR*LTHFHH
Trigger: ATGATGAAAGTGTGTTAACCAACGTGTTCTGCTCAC...CCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACACTTCTGCCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CCA 90 bp CAGGGGGTAGGGGAGGGTGGCAGAGTTGTAATTCTCTGTAATAAGGGTTGGGAAGTTTTCTGGCATCATTaGAGATTTTCTCAAGGCAGA +
Preference number: 4 (lower is better)
Translates to: QGVGEGGRVVILCNKGWEVFWHH*RFSQGR
Trigger: TCTGCCTTGAGAAAATCTCCAATGATGCCAGAAAAC...TTCCCAACCCTTATTACAGAGAATTACAACTCTGCCACCCTCCCCTACCCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CCA 90 bp CAGGGGGTAGGGGAGGGTGGCAGAGTTGTAATTCTCTGTAATAAGGGTTGGGAAAAATATACAGCATCCTaGTGTCACAGAACAGACAGA +
Preference number: 4 (lower is better)
Translates to: QGVGEGGRVVILCNKGWEKYTAS*CHRTDR
Trigger: TCTGTCTGTTCTGTGACACCAGGATGCTGTATATTT...TTCCCAACCCTTATTACAGAGAATTACAACTCTGCCACCCTCCCCTACCCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CCA 90 bp AAGAGGCAGAAGTGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGGAAACCCAAGTCAGATaGAACAGGTTAAACATGAAG +
Preference number: 4 (lower is better)
Translates to: KRQKCDIELSETSVWVGWETQVR*NRLNMK
Trigger: CTTCATGTTTAACCTGTTCCATCTGACTTGGGTTTC...CCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACACTTCTGCCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
3UTR CAA 72 bp TACAGGAGAGTCCATGGGGCTGCTCATCAGATTTTGTaGATAGGCAAGGTGCTTAAACACCAAGTGACAAGG +
Preference number: 4 (lower is better)
Translates to: YRRVHGAAHQIL*IGKVLKHQVTR
Trigger: CCTTGTCACTTGGTGTTTAAGCACCTTGCCTATCAACAAAATCTGATGAGCAGCCCCATGGACTCTCCTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR TCA 90 bp TATCAAATATACAGCATCCTGGTGTCACAGAACAGACAGAACTGTCCTAGACACAGTGTGACATTGAATTaGGTGAGACGAGCGTGTGGG +
Preference number: 4 (lower is better)
Translates to: YQIYSILVSQNRQNCPRHSVTLN*VRRACG
Trigger: CCCACACGCTCGTCTCACTCAATTCAATGTCACACT...GTGTCTAGGACAGTTCTGTCTGTTCTGTGACACCAGGATGCTGTATATTTGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR TCA 90 bp TATCAAATATACAGCATCCTGGTGTCACAGAACAGACAGAACTGTCCTAGACACGGCCTTTCCCAGTTATaGGGCCTAGAGCATAGGAAA +
Preference number: 4 (lower is better)
Translates to: YQIYSILVSQNRQNCPRHGLSQL*GLEHRK
Trigger: TTTCCTATGCTCTAGGCCTCATAACTGGGAAAGGCC...GTGTCTAGGACAGTTCTGTCTGTTCTGTGACACCAGGATGCTGTATATTTGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR TCA 90 bp TTGTTGATAGGCAAGGTGCTTAAACACCAAGTGACAAGGTCCAAATGTGTGAGGGAGTTACTCCTGGACTaGACTAAAGACTCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: LLIGKVLKHQVTRSKCVRELLLD*TKDSKS
Trigger: GGACTTGGAGTCTTTAGTTCAGTCCAGGAGTAACTC...CCTCACACATTTGGACCTTGTCACTTGGTGTTTAAGCACCTTGCCTATCAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR GCA 90 bp TATCAAATATACAGCATCCTGGTGTCACAGAACAGACAGAACTGTCCTAGACACTCCAGCATCCGAGGTTaGCTTTCTACAATCTGCCTG +
Preference number: 4 (lower is better)
Translates to: YQIYSILVSQNRQNCPRHSSIRG*LSTICL
Trigger: CAGGCAGATTGTAGAAAGGCAACCTCGGATGCTGGA...GTGTCTAGGACAGTTCTGTCTGTTCTGTGACACCAGGATGCTGTATATTTGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CCA 90 bp CAAATGAAAAAGTCTATACTTTGGGGGAAATTTGCCAGAGCTCTCCACCTCTTAGGAGAGGTCCCTGGTTaGAGCATCAGAGAAGACACA +
Preference number: 4 (lower is better)
Translates to: QMKKSILWGKFARALHLLGEVPG*SIREDT
Trigger: TGTGTCTTCTCTGATGCTCCAACCAGGGACCTCTCC...TAAGAGGTGGAGAGCTCTGGCAAATTTCCCCCAAAGTATAGACTTTTTCATTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CCA 90 bp AACAAAAGCTGTAACCTTCTCCTTGCAGTGGTATCCTTGATGGTGGCTTTGGTCCATCCTGGAAAGTCCTaGAATGTCTCTCCTAGGAAA +
Preference number: 4 (lower is better)
Translates to: NKSCNLLLAVVSLMVALVHPGKS*NVSPRK
Trigger: TTTCCTAGGAGAGACATTCCAGGACTTTCCAGGATG...GACCAAAGCCACCATCAAGGATACCACTGCAAGGAGAAGGTTACAGCTTTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494400.5
CDS-3UTR TCA 90 bp AGCAGTCCAAGAACACAAGGGAGTAAACTGGAATGGGGGATGACAAAGAGTCCTTCCTCAAACAAAACCTaGCATCTTAGTAAAGCCATC +
Preference number: 4 (lower is better)
Translates to: SSPRTQGSKLEWGMTKSPSSNKT*HLSKAI
Trigger: GATGGCTTTACTAAGATGTCAGGTTTTGTTTGAGGA...AGGACTCTTTGTCATCCCCCATTCCAGTTTACTCCCTTGTGTTCTTGGACTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR TCA 90 bp TATCAAATATACAGCATCCTGGTGTCACAGAACAGACAGAACTGTCCTAGACACGCAACACATGTCTTCTaGGTTGAGTCCCCAAGTTTG +
Preference number: 4 (lower is better)
Translates to: YQIYSILVSQNRQNCPRHATHVF*VESPSL
Trigger: CAAACTTGGGGACTCAACTCAGAAGACATGTGTTGC...GTGTCTAGGACAGTTCTGTCTGTTCTGTGACACCAGGATGCTGTATATTTGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR GCA 90 bp TTGTTGATAGGCAAGGTGCTTAAACACCAAGTGACAAGGTCCAAATGTGTGAGGACTTGCTGGATTAAATaGAGGTCCTGGTATGGTCTC +
Preference number: 4 (lower is better)
Translates to: LLIGKVLKHQVTRSKCVRTCWIK*RSWYGL
Trigger: GAGACCATACCAGGACCTGCATTTAATCCAGCAAGT...CCTCACACATTTGGACCTTGTCACTTGGTGTTTAAGCACCTTGCCTATCAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR GCA 90 bp AATGACAATATAAGTGGGGAAGGCCCAGAGGGGATTCTATTAAGAATGGAATGGCAAACGAAACTGTTCTaGCATCTCTCTCTCGTGAGC +
Preference number: 4 (lower is better)
Translates to: NDNISGEGPEGILLRMEWQTKLF*HLSLVS
Trigger: GCTCACGAGAGAGAGATGGCAGAACAGTTTCGTTTG...CCATTCCATTCTTAATAGAATCCCCTCTGGGCCTTCCCCACTTATATTGTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494400.5
CDS-3UTR GCA 90 bp TATCAAATATACAGCATCCTGGTGTCACAGAACAGACAGAACTGTCCTAGACACACTTTGGGGGAAATTTaGCAGAGCTCTCCACCTCTT +
Preference number: 4 (lower is better)
Translates to: YQIYSILVSQNRQNCPRHTLGEI*QSSPPL
Trigger: AAGAGGTGGAGAGCTCTGGCAAATTTCCCCCAAAGT...GTGTCTAGGACAGTTCTGTCTGTTCTGTGACACCAGGATGCTGTATATTTGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CCA 90 bp ACCCAAGTTTATTCAGCATTCATGGCAAATCTGGATTCTTCATTCCTAGCCTATCAGCCCTCCCATAATTaGTGGCGAACGGGGATACTT +
Preference number: 4 (lower is better)
Translates to: TQVYSAFMANLDSSFLAYQPSHN*WRTGIL
Trigger: AAGTATCCCCGTTCGCCACCAATTATGGGAGGGCTG...ATAGGCTAGGAATGAAGAATCCAGATTTGCCATGAATGCTGAATAAACTTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494400.5
3UTR CAA 72 bp TATTACAGGAGAGTCCATGGGGCTGCTCATCAGATTTaGTTGATAGGCAAGGTGCTTAAACACCAAGTGACA +
Preference number: 4 (lower is better)
Translates to: YYRRVHGAAHQI*LIGKVLKHQVT
Trigger: TGTCACTTGGTGTTTAAGCACCTTGCCTATCAACAAAATCTGATGAGCAGCCCCATGGACTCTCCTGTAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR GCA 90 bp TTGTTGATAGGCAAGGTGCTTAAACACCAAGTGACAAGGTCCAAATGTGTGAGGAGGCAAGTACCAGCATaGCTGGCTAATGAAAAGTTT +
Preference number: 4 (lower is better)
Translates to: LLIGKVLKHQVTRSKCVRRQVPA*LANEKF
Trigger: AAACTTTTCATTAGCCAGGCATGCTGGTACTTGCCT...CCTCACACATTTGGACCTTGTCACTTGGTGTTTAAGCACCTTGCCTATCAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR TCA 90 bp TTGTTGATAGGCAAGGTGCTTAAACACCAAGTGACAAGGTCCAAATGTGTGAGGATCAGCATGAAGTTTTaGTTTAATGACTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LLIGKVLKHQVTRSKCVRISMKF*FNDSCR
Trigger: CCTGCAGGAGTCATTAAATCAAAACTTCATGCTGAT...CCTCACACATTTGGACCTTGTCACTTGGTGTTTAAGCACCTTGCCTATCAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR TCA 90 bp CTCTCATTCATCTTTGATTCTGGATGCTTACAATCCAGAGATGAACATCTGTGTGAGAAGTGTTCAGTTTaGACTCCCCTGAACACTTCC +
Preference number: 4 (lower is better)
Translates to: LSFIFDSGCLQSRDEHLCEKCSV*TPLNTS
Trigger: GGAAGTGTTCAGGGGAGTTCAAACTGAACACTTCTC...ACACAGATGTTCATCTCTGGATTGTAAGCATCCAGAATCAAAGATGAATGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CCA 90 bp TATCAAATATACAGCATCCTGGTGTCACAGAACAGACAGAACTGTCCTAGACACATTAAATGCAGGTCCTaGTATGGTCTCACCTCCATA +
Preference number: 4 (lower is better)
Translates to: YQIYSILVSQNRQNCPRHIKCRS*YGLTSI
Trigger: TATGGAGGTGAGACCATACCAGGACCTGCATTTAAT...GTGTCTAGGACAGTTCTGTCTGTTCTGTGACACCAGGATGCTGTATATTTGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CCA 90 bp TATCAAATATACAGCATCCTGGTGTCACAGAACAGACAGAACTGTCCTAGACACTTCCCTATGCTGCAATaGAACAGCAAATACCTCCTA +
Preference number: 4 (lower is better)
Translates to: YQIYSILVSQNRQNCPRHFPMLQ*NSKYLL
Trigger: TAGGAGGTATTTGCTGTTCCATTGCAGCATAGGGAA...GTGTCTAGGACAGTTCTGTCTGTTCTGTGACACCAGGATGCTGTATATTTGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CCA 90 bp TTGTTGATAGGCAAGGTGCTTAAACACCAAGTGACAAGGTCCAAATGTGTGAGGACCTATCTCCAGCTTTaGTTAGAATCTTCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: LLIGKVLKHQVTRSKCVRTYLQL*LESSEN
Trigger: GTTCTCAGAAGATTCTAACCAAAGCTGGAGATAGGT...CCTCACACATTTGGACCTTGTCACTTGGTGTTTAAGCACCTTGCCTATCAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CCA 90 bp AGCAGTCCAAGAACACAAGGGAGTAAACTGGAATGGGGGATGACAAAGAGTCCTTTTGTAGACAAGCAGTaGAAAATTAGAGTTAGCACT +
Preference number: 4 (lower is better)
Translates to: SSPRTQGSKLEWGMTKSPFVDKQ*KIRVST
Trigger: AGTGCTAACTCTAATTTTCCACTGCTTGTCTACAAA...AGGACTCTTTGTCATCCCCCATTCCAGTTTACTCCCTTGTGTTCTTGGACTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396153.7
3UTR CAA 72 bp TTATATGCAGGTTTCAGGCAACACATGTCTTCTGAGTaGAGTCCCCAAGTTTGCTCTCTTCAACATATGAAG +
Preference number: 4 (lower is better)
Translates to: LYAGFRQHMSSE*SPQVCSLQHMK
Trigger: CTTCATATGTTGAAGAGAGCAAACTTGGGGACTCAACTCAGAAGACATGTGTTGCCTGAAACCTGCATATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR TCA 90 bp CAAATGAAAAAGTCTATACTTTGGGGGAAATTTGCCAGAGCTCTCCACCTCTTAGTGATCACTCACACTTaGACAATGCATTCGTCATTG +
Preference number: 4 (lower is better)
Translates to: QMKKSILWGKFARALHLLVITHT*TMHSSL
Trigger: CAATGACGAATGCATTGTTCAAGTGTGAGTGATCAC...TAAGAGGTGGAGAGCTCTGGCAAATTTCCCCCAAAGTATAGACTTTTTCATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR TCA 90 bp CTCTCATTCATCTTTGATTCTGGATGCTTACAATCCAGAGATGAACATCTGTGTAGGAAATCATGGGGCTaGGTAGGCCAAAAGAACTTT +
Preference number: 4 (lower is better)
Translates to: LSFIFDSGCLQSRDEHLCRKSWG*VGQKNF
Trigger: AAAGTTCTTTTGGCCTACTCAGCCCCATGATTTCCT...ACACAGATGTTCATCTCTGGATTGTAAGCATCCAGAATCAAAGATGAATGAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR GCA 90 bp ACCCAAGTTTATTCAGCATTCATGGCAAATCTGGATTCTTCATTCCTAGCCTATAGGCAGATGACGCCATaGCAAATACTTCTCCATCAT +
Preference number: 4 (lower is better)
Translates to: TQVYSAFMANLDSSFLAYRQMTP*QILLHH
Trigger: ATGATGGAGAAGTATTTGGCATGGCGTCATCTGCCT...ATAGGCTAGGAATGAAGAATCCAGATTTGCCATGAATGCTGAATAAACTTGGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494400.5
CDS-3UTR CCA 90 bp TATCAAATATACAGCATCCTGGTGTCACAGAACAGACAGAACTGTCCTAGACACATATCTTCCTGTTGTTaGGCTGTGAAGATCTCCATT +
Preference number: 4 (lower is better)
Translates to: YQIYSILVSQNRQNCPRHISSCC*AVKISI
Trigger: AATGGAGATCTTCACAGCCCAACAACAGGAAGATAT...GTGTCTAGGACAGTTCTGTCTGTTCTGTGACACCAGGATGCTGTATATTTGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CCA 90 bp AATGACAATATAAGTGGGGAAGGCCCAGAGGGGATTCTATTAAGAATGGAATGGATATCTTCCTGTTGTTaGGCTGTGAAGATCTCCATT +
Preference number: 4 (lower is better)
Translates to: NDNISGEGPEGILLRMEWISSCC*AVKISI
Trigger: AATGGAGATCTTCACAGCCCAACAACAGGAAGATAT...CCATTCCATTCTTAATAGAATCCCCTCTGGGCCTTCCCCACTTATATTGTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494400.5
CDS-3UTR CCA 90 bp CTCTCATTCATCTTTGATTCTGGATGCTTACAATCCAGAGATGAACATCTGTGTCAGATACTGAAGTTTTaGTACTGGCCTCTCTGCACA +
Preference number: 4 (lower is better)
Translates to: LSFIFDSGCLQSRDEHLCQILKF*YWPLCT
Trigger: TGTGCAGAGAGGCCAGTACCAAAACTTCAGTATCTG...ACACAGATGTTCATCTCTGGATTGTAAGCATCCAGAATCAAAGATGAATGAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CCA 90 bp TTGTTGATAGGCAAGGTGCTTAAACACCAAGTGACAAGGTCCAAATGTGTGAGGAAAAAGTCTATACTTTaGGGGAAATTTGCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: LLIGKVLKHQVTRSKCVRKKSIL*GKFARA
Trigger: AGCTCTGGCAAATTTCCCCCAAAGTATAGACTTTTT...CCTCACACATTTGGACCTTGTCACTTGGTGTTTAAGCACCTTGCCTATCAACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR TCA 90 bp TATCAAATATACAGCATCCTGGTGTCACAGAACAGACAGAACTGTCCTAGACACATAAATCATTGGCTGTaGAGGTATAAACGGTGTTCT +
Preference number: 4 (lower is better)
Translates to: YQIYSILVSQNRQNCPRHINHWL*RYKRCS
Trigger: AGAACACCGTTTATACCTTCACAGCCAATGATTTAT...GTGTCTAGGACAGTTCTGTCTGTTCTGTGACACCAGGATGCTGTATATTTGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR GCA 90 bp CAAATGAAAAAGTCTATACTTTGGGGGAAATTTGCCAGAGCTCTCCACCTCTTACATAGTGAGAAATCTTaGTCTGTTGGAGTCCTTTGT +
Preference number: 4 (lower is better)
Translates to: QMKKSILWGKFARALHLLHSEKS*SVGVLC
Trigger: ACAAAGGACTCCAACAGAGCAAGATTTCTCACTATG...TAAGAGGTGGAGAGCTCTGGCAAATTTCCCCCAAAGTATAGACTTTTTCATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR GCA 90 bp TTGTTGATAGGCAAGGTGCTTAAACACCAAGTGACAAGGTCCAAATGTGTGAGGGGACAAAATACTAAATaGAGAGATATTCAAGGCAAG +
Preference number: 4 (lower is better)
Translates to: LLIGKVLKHQVTRSKCVRGQNTK*RDIQGK
Trigger: CTTGCCTTGAATATCTCTGCATTTAGTATTTTGTCC...CCTCACACATTTGGACCTTGTCACTTGGTGTTTAAGCACCTTGCCTATCAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CCA 90 bp CTCTCATTCATCTTTGATTCTGGATGCTTACAATCCAGAGATGAACATCTGTGTAGGTGGTGGCAAATCTaGTGTAAGGACATAAAGACT +
Preference number: 4 (lower is better)
Translates to: LSFIFDSGCLQSRDEHLCRWWQI*CKDIKT
Trigger: AGTCTTTATGTCCTTACACCAGATTTGCCACCACCT...ACACAGATGTTCATCTCTGGATTGTAAGCATCCAGAATCAAAGATGAATGAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CCA 90 bp ACCCAAGTTTATTCAGCATTCATGGCAAATCTGGATTCTTCATTCCTAGCCTATTCTTCACATTTTCTCTaGCTTCACGTTCATCCTCGT +
Preference number: 4 (lower is better)
Translates to: TQVYSAFMANLDSSFLAYSSHFL*LHVHPR
Trigger: ACGAGGATGAACGTGAAGCCAGAGAAAATGTGAAGA...ATAGGCTAGGAATGAAGAATCCAGATTTGCCATGAATGCTGAATAAACTTGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494400.5
3UTR CAA 72 bp TTTATGTACAACTGTAGAGGATTCCAAGATCCGTTCTaGAATATAAAATTTAGAGATTCTTGGCCGGGCGCC +
Preference number: 4 (lower is better)
Translates to: FMYNCRGFQDPF*NIKFRDSWPGA
Trigger: GGCGCCCGGCCAAGAATCTCTAAATTTTATATTCAAGAACGGATCTTGGAATCCTCTACAGTTGTACATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396153.7
3UTR CAA 72 bp AACCTTCTCCTTGCAGTGGTATCCTTGATGGTGGCTTaGGTCACTATACTATTAAATGACAATATAAGTGGG +
Preference number: 4 (lower is better)
Translates to: NLLLAVVSLMVA*VTILLNDNISG
Trigger: CCCACTTATATTGTCATTTAATAGTATAGTGACCAAAGCCACCATCAAGGATACCACTGCAAGGAGAAGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494400.5
3UTR CAA 72 bp AACAAAAGCTGTAACCTTCTCCTTGCAGTGGTATCCTaGATGGTGGCTTTGGTCACTATACTATTAAATGAC +
Preference number: 4 (lower is better)
Translates to: NKSCNLLLAVVS*MVALVTILLND
Trigger: GTCATTTAATAGTATAGTGACCAAAGCCACCATCAAGGATACCACTGCAAGGAGAAGGTTACAGCTTTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494400.5
CDS-3UTR CCA 90 bp CCAATAATGATTTATTTGGGTCCAGTTGAGTTACCCAAGTTTATTCAGCATTCACCACACAGGCATGTCTaGGCCCAATGTTATCATATT +
Preference number: 4 (lower is better)
Translates to: PIMIYLGPVELPKFIQHSPHRHV*AQCYHI
Trigger: AATATGATAACATTGGGCCCAGACATGCCTGTGTGG...TGAATGCTGAATAAACTTGGGTAACTCAACTGGACCCAAATAAATCATTATTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494400.5
3UTR CAA 72 bp CTTGAGGGAACAACTTTACCTCCAATAATGATTTATTaGGGTCCAGTTGAGTTACCCAAGTTTATTCAGCAT +
Preference number: 4 (lower is better)
Translates to: LEGTTLPPIMIY*GPVELPKFIQH
Trigger: ATGCTGAATAAACTTGGGTAACTCAACTGGACCCAAATAAATCATTATTGGAGGTAAAGTTGTTCCCTCAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494400.5
CDS-3UTR CCA 90 bp CTCTCATTCATCTTTGATTCTGGATGCTTACAATCCAGAGATGAACATCTGTGTAAGTACCAGCATGCCTaGCTAATGAAAAGTTTTATT +
Preference number: 4 (lower is better)
Translates to: LSFIFDSGCLQSRDEHLCKYQHA*LMKSFI
Trigger: AATAAAACTTTTCATTAGCCAGGCATGCTGGTACTT...ACACAGATGTTCATCTCTGGATTGTAAGCATCCAGAATCAAAGATGAATGAGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS CCA 90 bp ATGGCGGCCGCCGAGTTCCGCGGCTCCGGGAGCGAAGCGCGCACCTaGGAGGCAGACGGCACCTCCTGCGACCGTCGCCGCCACCGCCGC +
Preference number: 5 (lower is better)
Translates to: MAAAEFRGSGSEART*EADGTSCDRRRHRR
Trigger: GCGGCGGTGGCGGCGACGGTCGCAGGAGGTGCCGTCTGCCTCCCAGGTGCGCGCTTCGCTCCCGGAGCCGCGGAACTCGGCGGCCGCCAT
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS GCA 90 bp GGCGCTCATGCACTCGGTAACCTTCAGGCGCCCCGGCCGCCCGCCTaGAACCTGCGGAGCCCGCGTCGCAGCAGCCCGGACAGGAAGATT +
Preference number: 5 (lower is better)
Translates to: GAHALGNLQAPRPPA*NLRSPRRSSPDRKI
Trigger: AATCTTCCTGTCCGGGCTGCTGCGACGCGGGCTCCGCAGGTTGCAGGCGGGCGGCCGGGGCGCCTGAAGGTTACCGAGTGCATGAGCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS GCA 90 bp GATGTGGGTCCGGTCTTACAGTCGCGGGCCAGGATGAGGGCAGGTTaGGACAGCGCGCACCCGGATACCTTCAGCGGCGTTAAGCCCGGC +
Preference number: 5 (lower is better)
Translates to: DVGPVLQSRARMRAG*DSAHPDTFSGVKPG
Trigger: GCCGGGCTTAACGCCGCTGAAGGTATCCGGGTGCGCGCTGTCGCAACCTGCCCTCATCCTGGCCCGCGACTGTAAGACCGGACCCACATC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS TCA 90 bp AGATTGGTCTGGATGTGGGTCCGGTCTTACAGTCGCGGGCCAGGATaGGGGCAGGTTGCGACAGCGCGCACCCGGATACCTTCAGCGGCG +
Preference number: 5 (lower is better)
Translates to: RLVWMWVRSYSRGPG*GQVATARTRIPSAA
Trigger: CGCCGCTGAAGGTATCCGGGTGCGCGCTGTCGCAACCTGCCCTCATCCTGGCCCGCGACTGTAAGACCGGACCCACATCCAGACCAATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS CCA 90 bp CAGTACATGCCTGAAAATCCGCCAGGATCATCTCCCGGTCCATGTTaGACGCCATGGCGGCCGCCGAGTTCCGCGGCTCCGGGAGCGAAG +
Preference number: 5 (lower is better)
Translates to: QYMPENPPGSSPGPC*TPWRPPSSAAPGAK
Trigger: CTTCGCTCCCGGAGCCGCGGAACTCGGCGGCCGCCATGGCGTCCAACATGGACCGGGAGATGATCCTGGCGGATTTTCAGGCATGTACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CAA 90 bp CTTCTCCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGAGCGTGTGGGTGGGTaGGCGAGGAGCCCTTCTCCT +
Preference number: 5 (lower is better)
Translates to: LLLTQAAGLSRNGWFHRWERVGG*ARSPSP
Trigger: AGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTC...CCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGGAGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CAA 90 bp CCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTTCTTCTGAGAACCCCTaGGCCGAGGCTGGGGGAACA +
Preference number: 5 (lower is better)
Translates to: PDAGCWLVKEWLVPPLGRSSENP*AEAGGT
Trigger: TGTTCCCCCAGCCTCGGCCAAGGGGTTCTCAGAAGA...ACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CAA 90 bp CTTCTCCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCCGGACAGGAAGATaGGTCTGGATGTGGGTCCGG +
Preference number: 5 (lower is better)
Translates to: LLLTQAAGLSRNGWFHRWARTGR*VWMWVR
Trigger: CCGGACCCACATCCAGACCAATCTTCCTGTCCGGGC...CCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGGAGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CAA 90 bp GAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGACGCAGGCTGCTGTCCAGCATCCGAGGTaGCCTTTCTACAATCTGCCT +
Preference number: 5 (lower is better)
Translates to: ETSVWVGWRGALLLTQAAVQHPR*PFYNLP
Trigger: AGGCAGATTGTAGAAAGGCAACCTCGGATGCTGGAC...AGCAGCCTGCGTCAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371778.5
ENST00000396153.7
CDS-3UTR CAA 90 bp CTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTGCTCTGTTGGAGTCCTTaGTCAGATCCCAAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: LTQAAGLSRNGWFHRWAVLCWSP*SDPKPR
Trigger: CCTGGGCTTGGGATCTGACAAAGGACTCCAACAGAG...CACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CAA 90 bp CTCCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCCGTGAGCTTCCCTCTTaGCTCTGTCAGCCTCAAGTG +
Preference number: 5 (lower is better)
Translates to: LLTQAAGLSRNGWFHRWARELPS*LCQPQV
Trigger: CACTTGAGGCTGACAGAGCAAAGAGGGAAGCTCACG...GGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CAA 90 bp AGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGACGCAGGCTCGTGAGCTTCCCTCTTaGCTCTGTCAGCCTCAAGTG +
Preference number: 5 (lower is better)
Translates to: SETSVWVGWRGALLLTQARELPS*LCQPQV
Trigger: CACTTGAGGCTGACAGAGCAAAGAGGGAAGCTCACG...AGCCTGCGTCAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CAA 90 bp CTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTGGTCCGGATCCGCAGTTaGCTCACAGGCTCAGCATTT +
Preference number: 5 (lower is better)
Translates to: LTQAAGLSRNGWFHRWAVVRIRS*LTGSAF
Trigger: AAATGCTGAGCCTGTGAGCAAACTGCGGATCCGGAC...CACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CAA 90 bp CCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTTGGAGAGGTCCCTGGTaGGAGCATCAGAGAAGACAC +
Preference number: 5 (lower is better)
Translates to: PDAGCWLVKEWLVPPLGRWRGPW*EHQRRH
Trigger: GTGTCTTCTCTGATGCTCCAACCAGGGACCTCTCCA...ACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CAA 90 bp CCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTGTCCAGCATCCGAGGTaGCCTTTCTACAATCTGCCT +
Preference number: 5 (lower is better)
Translates to: PDAGCWLVKEWLVPPLGRVQHPR*PFYNLP
Trigger: AGGCAGATTGTAGAAAGGCAACCTCGGATGCTGGAC...ACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371778.5
ENST00000396153.7
CDS-3UTR CAA 90 bp CCTTCTCCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGACAATCTGGAGCTTGTaGCTGGCCAGGAAACGCCGC +
Preference number: 5 (lower is better)
Translates to: PSPDAGCWLVKEWLVPPLTIWSL*LARKRR
Trigger: GCGGCGTTTCCTGGCCAGCAACAAGCTCCAGATTGT...CAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGGAGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CAA 90 bp AGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGACGCAGGCTAAGACAATCTGGAGCTaGTTGCTGGCCAGGAAACGC +
Preference number: 5 (lower is better)
Translates to: SETSVWVGWRGALLLTQAKTIWS*LLARKR
Trigger: GCGTTTCCTGGCCAGCAACAAGCTCCAGATTGTCTT...AGCCTGCGTCAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CAA 90 bp CCTTCTCCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGACGCAGGCTGCTGGCTaGTCAAGGAATGGCTGGTTC +
Preference number: 5 (lower is better)
Translates to: PSPDAGCWLVKEWLVPPLTQAAG*SRNGWF
Trigger: GAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGT...CAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGGAGAAGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CAA 90 bp CCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTTTTAGAGACAGGGTCTaGGTATGTGGTCAGGGCTGG +
Preference number: 5 (lower is better)
Translates to: PDAGCWLVKEWLVPPLGRFRDRV*VCGQGW
Trigger: CCAGCCCTGACCACATACCAAGACCCTGTCTCTAAA...ACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS CCA 90 bp GGAGCTTGTTGCTGGCCAGGAAACGCCGCTCCAAGAACTCGCCACTaGGGGTCCGGATCCGCAGTTTGCTCACAGGCTCAGCATTTTCTT +
Preference number: 5 (lower is better)
Translates to: GACCWPGNAAPRTRH*GSGSAVCSQAQHFL
Trigger: AAGAAAATGCTGAGCCTGTGAGCAAACTGCGGATCCGGACCCCCAGTGGCGAGTTCTTGGAGCGGCGTTTCCTGGCCAGCAACAAGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CAA 90 bp GAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGACGCTCTGTTGGAGTCCTTaGTCAGATCCCAAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: ELSETSVWVGWRGALLLTLCWSP*SDPKPR
Trigger: CCTGGGCTTGGGATCTGACAAAGGACTCCAACAGAG...CGTCAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CAA 90 bp CTTCTCCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGCGTGAGCTTCCCTCTTaGCTCTGTCAGCCTCAAGTG +
Preference number: 5 (lower is better)
Translates to: LLLTQAAGLSRNGWFHRWRELPS*LCQPQV
Trigger: CACTTGAGGCTGACAGAGCAAAGAGGGAAGCTCACG...CCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGGAGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CAA 90 bp CCTTCTCCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGTCCGGATCCGCAGTTaGCTCACAGGCTCAGCATTT +
Preference number: 5 (lower is better)
Translates to: PSPDAGCWLVKEWLVPPLVRIRS*LTGSAF
Trigger: AAATGCTGAGCCTGTGAGCAAACTGCGGATCCGGAC...CAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGGAGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CAA 90 bp CTTCTCCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGTCCGGATCCGCAGTTaGCTCACAGGCTCAGCATTT +
Preference number: 5 (lower is better)
Translates to: LLLTQAAGLSRNGWFHRWVRIRS*LTGSAF
Trigger: AAATGCTGAGCCTGTGAGCAAACTGCGGATCCGGAC...CCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGGAGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CAA 90 bp GTCTCAAACTTGGCACACTGTCGGGGACACCCTGGGCACCAAACAAAAGCTGTAGAGCGTGTGGGTGGGTaGGCGAGGAGCCCTTCTCCT +
Preference number: 5 (lower is better)
Translates to: VSNLAHCRGHPGHQTKAVERVGG*ARSPSP
Trigger: AGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTC...TACAGCTTTTGTTTGGTGCCCAGGGTGTCCCCGACAGTGTGCCAAGTTTGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494400.5
CDS-3UTR CAA 90 bp CAGGGGGTAGGGGAGGGTGGCAGAGTTGTAATTCTCTGTAATAAGGGTTGGGAAATCTCCCGGTCCATGTaGGACGCCATGGCGGCCGCC +
Preference number: 5 (lower is better)
Translates to: QGVGEGGRVVILCNKGWEISRSM*DAMAAA
Trigger: GGCGGCCGCCATGGCGTCCAACATGGACCGGGAGAT...TTCCCAACCCTTATTACAGAGAATTACAACTCTGCCACCCTCCCCTACCCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CAA 90 bp GAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGACGCAGCATTTTCTTCCTTaGGCTCAGGAGGCAGGGCTT +
Preference number: 5 (lower is better)
Translates to: ELSETSVWVGWRGALLLTQHFLP*AQEAGL
Trigger: AAGCCCTGCCTCCTGAGCCAAAGGAAGAAAATGCTG...CGTCAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CAA 90 bp CCTTCTCCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGCAGCATTTTCTTCCTTaGGCTCAGGAGGCAGGGCTT +
Preference number: 5 (lower is better)
Translates to: PSPDAGCWLVKEWLVPPLQHFLP*AQEAGL
Trigger: AAGCCCTGCCTCCTGAGCCAAAGGAAGAAAATGCTG...CAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGGAGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CAA 90 bp CCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTATGAACATCGGTGATTaGTTCTTCCGACTGTTCCCG +
Preference number: 5 (lower is better)
Translates to: PDAGCWLVKEWLVPPLGRMNIGD*FFRLFP
Trigger: CGGGAACAGTCGGAAGAACAAATCACCGATGTTCAT...ACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CAA 90 bp CCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTAGTAGCCTCTTGCCATaGGGCCAGATACTGAAGTTT +
Preference number: 5 (lower is better)
Translates to: PDAGCWLVKEWLVPPLGRSSLLP*GQILKF
Trigger: AAACTTCAGTATCTGGCCCAATGGCAAGAGGCTACT...ACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CAA 90 bp CCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTCACATGTCTTCTGAGTaGAGTCCCCAAGTTTGCTCT +
Preference number: 5 (lower is better)
Translates to: PDAGCWLVKEWLVPPLGRHMSSE*SPQVCS
Trigger: AGAGCAAACTTGGGGACTCAACTCAGAAGACATGTG...ACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CAA 90 bp CTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTGTGTGGTATTACACCATaGATAGCTGCCACTAAGTCC +
Preference number: 5 (lower is better)
Translates to: LTQAAGLSRNGWFHRWAVCGITP*IAATKS
Trigger: GGACTTAGTGGCAGCTATCAATGGTGTAATACCACA...CACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371778.5
ENST00000396153.7
CDS-3UTR CAA 90 bp GAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGACGCAGGCTGCTTGTGAGCAGAACACGTaGGTTAACACACTTTCATCA +
Preference number: 5 (lower is better)
Translates to: ETSVWVGWRGALLLTQAACEQNT*VNTLSS
Trigger: TGATGAAAGTGTGTTAACCAACGTGTTCTGCTCACA...AGCAGCCTGCGTCAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CAA 90 bp AGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGACGCAGGCTAGAAATCTTGCTCTGTaGGAGTCCTTTGTCAGATCC +
Preference number: 5 (lower is better)
Translates to: SETSVWVGWRGALLLTQARNLAL*ESFVRS
Trigger: GGATCTGACAAAGGACTCCAACAGAGCAAGATTTCT...AGCCTGCGTCAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CAA 90 bp TGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTACGCAGGCTGCTGGCTaGTCAAGGAATGGCTGGTTC +
Preference number: 5 (lower is better)
Translates to: CDIELSETSVWVGWRGALTQAAG*SRNGWF
Trigger: GAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGT...AAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CAA 90 bp CTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTGCGTTTTCTGGCATCATaGGAGATTTTCTCAAGGCAG +
Preference number: 5 (lower is better)
Translates to: LTQAAGLSRNGWFHRWAVRFLAS*EIFSRQ
Trigger: CTGCCTTGAGAAAATCTCCAATGATGCCAGAAAACG...CACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CAA 90 bp AGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGACGCAGGCTAGAGAAGTGTTCAGTTaGAACTCCCCTGAACACTTC +
Preference number: 5 (lower is better)
Translates to: SETSVWVGWRGALLLTQAREVFS*NSPEHF
Trigger: GAAGTGTTCAGGGGAGTTCAAACTGAACACTTCTCT...AGCCTGCGTCAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CAA 90 bp CTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTGAAACTGATCCGTTTTTaGAGTCCGAATGGTTTGTGC +
Preference number: 5 (lower is better)
Translates to: LTQAAGLSRNGWFHRWAVKLIRF*SPNGLC
Trigger: GCACAAACCATTCGGACTCAAAAAACGGATCAGTTT...CACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CAA 90 bp CCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTCTTTATATCTTCCTGTaGTTGGGCTGTGAAGATCTC +
Preference number: 5 (lower is better)
Translates to: PDAGCWLVKEWLVPPLGRLYIFL*LGCEDL
Trigger: GAGATCTTCACAGCCCAACAACAGGAAGATATAAAG...ACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CAA 90 bp CTCCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCCTTTATATCTTCCTGTaGTTGGGCTGTGAAGATCTC +
Preference number: 5 (lower is better)
Translates to: LLTQAAGLSRNGWFHRWALYIFL*LGCEDL
Trigger: GAGATCTTCACAGCCCAACAACAGGAAGATATAAAG...GGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CAA 90 bp CTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTGAAGGAAAAGGGTTTCTaGAGGGAACAACTTTACCTC +
Preference number: 5 (lower is better)
Translates to: LTQAAGLSRNGWFHRWAVKEKGF*REQLYL
Trigger: GAGGTAAAGTTGTTCCCTCAAGAAACCCTTTTCCTT...CACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CAA 90 bp ATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGCCTGAGAAGTTCAGGTaGTACTCCCGCTGGACTTCT +
Preference number: 5 (lower is better)
Translates to: IELSETSVWVGWRGALLLPEKFR*YSRWTS
Trigger: AGAAGTCCAGCGGGAGTACAACCTGAACTTCTCAGG...CAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396153.7
ENST00000494400.5
CDS GCA 90 bp CTCACAGGCTCAGCATTTTCTTCCTTTGGCTCAGGAGGCAGGGCTTaGTCTAAGGACAGCCGGATGGCCTCACGTTCCTCTTCTTGTTCT +
Preference number: 5 (lower is better)
Translates to: LTGSAFSSFGSGGRA*SKDSRMASRSSSCS
Trigger: AGAACAAGAAGAGGAACGTGAGGCCATCCGGCTGTCCTTAGAGCAAGCCCTGCCTCCTGAGCCAAAGGAAGAAAATGCTGAGCCTGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CAA 90 bp CTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTGTACTGTTGTGTTCCCTaGTATCACATTCAACACTTC +
Preference number: 5 (lower is better)
Translates to: LTQAAGLSRNGWFHRWAVYCCVP*YHIQHF
Trigger: GAAGTGTTGAATGTGATACAAGGGAACACAACAGTA...CACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CAA 90 bp AGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGACGCAGGCTTACTGTTGTGTTCCCTaGTATCACATTCAACACTTC +
Preference number: 5 (lower is better)
Translates to: SETSVWVGWRGALLLTQAYCCVP*YHIQHF
Trigger: GAAGTGTTGAATGTGATACAAGGGAACACAACAGTA...AGCCTGCGTCAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CAA 90 bp GCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTGTTTACTCTTTTGAAGACAATCTGGAGCTaGTTGCTGGCCAGGAAACGC +
Preference number: 5 (lower is better)
Translates to: AGLSRNGWFHRWAVFTLLKTIWS*LLARKR
Trigger: GCGTTTCCTGGCCAGCAACAAGCTCCAGATTGTCTT...CAAAAGAGTAAACACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494400.5
CDS-3UTR CAA 90 bp CCTTCTCCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGTTTATTTGGGTCCAGTaGAGTTACGTCTCTCCTAGG +
Preference number: 5 (lower is better)
Translates to: PSPDAGCWLVKEWLVPPLFIWVQ*SYVSPR
Trigger: CCTAGGAGAGACGTAACTCAACTGGACCCAAATAAA...CAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGGAGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371778.5
ENST00000396153.7
CDS CCA 90 bp ATCCTTTGGAAGCTACAAAATCAAAGACAATCTGGAGCTTGTTGCTaGCCAGGAAACGCCGCTCCAAGAACTCGCCACTGGGGGTCCGGA +
Preference number: 5 (lower is better)
Translates to: ILWKLQNQRQSGACC*PGNAAPRTRHWGSG
Trigger: TCCGGACCCCCAGTGGCGAGTTCTTGGAGCGGCGTTTCCTGGCCAGCAACAAGCTCCAGATTGTCTTTGATTTTGTAGCTTCCAAAGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CAA 90 bp ATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGTTGAGTCCGAATGGTTaGTGCCACAACACTGCCAAA +
Preference number: 5 (lower is better)
Translates to: IELSETSVWVGWRGALLLLSPNG*CHNTAK
Trigger: TTTGGCAGTGTTGTGGCACAAACCATTCGGACTCAA...CAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CAA 90 bp GAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGACGAAACTGATCCGTTTTTaGAGTCCGAATGGTTTGTGC +
Preference number: 5 (lower is better)
Translates to: ELSETSVWVGWRGALLLTKLIRF*SPNGLC
Trigger: GCACAAACCATTCGGACTCAAAAAACGGATCAGTTT...CGTCAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CAA 90 bp GAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGACGTATATCTTCCTGTTGTaGGGCTGTGAAGATCTCCAT +
Preference number: 5 (lower is better)
Translates to: ELSETSVWVGWRGALLLTYIFLL*GCEDLH
Trigger: ATGGAGATCTTCACAGCCCAACAACAGGAAGATATA...CGTCAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CAA 90 bp AGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGACGCAGGCTCCAATAATGATTTATTaGGGTCCAGTTGAGTTACGT +
Preference number: 5 (lower is better)
Translates to: SETSVWVGWRGALLLTQAPIMIY*GPVELR
Trigger: ACGTAACTCAACTGGACCCAAATAAATCATTATTGG...AGCCTGCGTCAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371778.5
ENST00000396153.7
CDS-3UTR CAA 90 bp CTTCTCCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGAAGGAAAAGGGTTTCTaGAGGGAACAACTTTACCTC +
Preference number: 5 (lower is better)
Translates to: LLLTQAAGLSRNGWFHRWKEKGF*REQLYL
Trigger: GAGGTAAAGTTGTTCCCTCAAGAAACCCTTTTCCTT...CCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGGAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CAA 90 bp CCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTAAGGATAAAATTGCTTaGGCCTTTTGTCTGAAGCTT +
Preference number: 5 (lower is better)
Translates to: PDAGCWLVKEWLVPPLGRKDKIA*AFCLKL
Trigger: AAGCTTCAGACAAAAGGCCAAAGCAATTTTATCCTT...ACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CAA 90 bp CTTCTCCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGAAAGGTGTGTCCAATaGCAAAGTGCTATCAGAATG +
Preference number: 5 (lower is better)
Translates to: LLLTQAAGLSRNGWFHRWERCVQ*QSAIRM
Trigger: CATTCTGATAGCACTTTGCAATTGGACACACCTTTC...CCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGGAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CAA 90 bp CAGGGGGTAGGGGAGGGTGGCAGAGTTGTAATTCTCTGTAATAAGGGTTGGGAATGGTCAGGGCTGGTCTaGAACTTCTGGCCTCAAGCA +
Preference number: 5 (lower is better)
Translates to: QGVGEGGRVVILCNKGWEWSGLV*NFWPQA
Trigger: TGCTTGAGGCCAGAAGTTCAAGACCAGCCCTGACCA...TTCCCAACCCTTATTACAGAGAATTACAACTCTGCCACCCTCCCCTACCCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CAA 90 bp CCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGGGCCGTTCCTTGATGGTGGCTTaGGTCACTATACTATTAAAT +
Preference number: 5 (lower is better)
Translates to: PDAGCWLVKEWLVPPLGRSLMVA*VTILLN
Trigger: ATTTAATAGTATAGTGACCAAAGCCACCATCAAGGA...ACGGCCCAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494400.5
CDS GCA 90 bp GAAATCCTTTGGAAGCTACAAAATCAAAGACAATCTGGAGCTTGTTaGTGGCCAGGAAACGCCGCTCCAAGAACTCGCCACTGGGGGTCC +
Preference number: 5 (lower is better)
Translates to: EILWKLQNQRQSGAC*WPGNAAPRTRHWGS
Trigger: GGACCCCCAGTGGCGAGTTCTTGGAGCGGCGTTTCCTGGCCAGCAACAAGCTCCAGATTGTCTTTGATTTTGTAGCTTCCAAAGGATTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CAA 90 bp ATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGAGAAATCTTGCTCTGTaGGAGTCCTTTGTCAGATCC +
Preference number: 5 (lower is better)
Translates to: IELSETSVWVGWRGALLLRNLAL*ESFVRS
Trigger: GGATCTGACAAAGGACTCCAACAGAGCAAGATTTCT...CAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CAA 90 bp CCTTCTCCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGCTGCCAAAGTGTCTATaGCACATAGTGAGAAATCTT +
Preference number: 5 (lower is better)
Translates to: PSPDAGCWLVKEWLVPPLLPKCL*HIVRNL
Trigger: AAGATTTCTCACTATGTGCAATAGACACTTTGGCAG...CAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGGAGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CAA 90 bp CCTTCTCCTGACGCAGGCTGCTGGCTTGTCAAGGAATGGCTGGTTCCACCGCTGTACTGTTGTGTTCCCTaGTATCACATTCAACACTTC +
Preference number: 5 (lower is better)
Translates to: PSPDAGCWLVKEWLVPPLYCCVP*YHIQHF
Trigger: GAAGTGTTGAATGTGATACAAGGGAACACAACAGTA...CAGCGGTGGAACCAGCCATTCCTTGACAAGCCAGCAGCCTGCGTCAGGAGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CAA 90 bp TATCAAATATACAGCATCCTGGTGTCACAGAACAGACAGAACTGTCCTAGACACGAGCGTGTGGGTGGGTaGGCGAGGAGCCCTTCTCCT +
Preference number: 5 (lower is better)
Translates to: YQIYSILVSQNRQNCPRHERVGG*ARSPSP
Trigger: AGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTC...GTGTCTAGGACAGTTCTGTCTGTTCTGTGACACCAGGATGCTGTATATTTGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CAA 90 bp CAAATGAAAAAGTCTATACTTTGGGGGAAATTTGCCAGAGCTCTCCACCTCTTACAGGATGAGGGCAGGTaGCGACAGCGCGCACCCGGA +
Preference number: 5 (lower is better)
Translates to: QMKKSILWGKFARALHLLQDEGR*RQRAPG
Trigger: TCCGGGTGCGCGCTGTCGCAACCTGCCCTCATCCTG...TAAGAGGTGGAGAGCTCTGGCAAATTTCCCCCAAAGTATAGACTTTTTCATTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CAA 90 bp TGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTATGAACATCGGTGATTaGTTCTTCCGACTGTTCCCG +
Preference number: 5 (lower is better)
Translates to: CDIELSETSVWVGWRGALMNIGD*FFRLFP
Trigger: CGGGAACAGTCGGAAGAACAAATCACCGATGTTCAT...AAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CAA 90 bp AAGAGGCAGAAGTGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCCTAACAGTAGCCTCTaGCCATTGGGCCAGATACTG +
Preference number: 5 (lower is better)
Translates to: KRQKCDIELSETSVWVGWPNSSL*PLGQIL
Trigger: CAGTATCTGGCCCAATGGCAAGAGGCTACTGTTAGG...CCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACACTTCTGCCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CAA 90 bp TGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTTCACTGTCAACAGTaGGGCATAAGAATGCCAAGC +
Preference number: 5 (lower is better)
Translates to: CDIELSETSVWVGWRGALLHCQQ*GIRMPS
Trigger: GCTTGGCATTCTTATGCCCAACTGTTGACAGTGAAG...AAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CAA 90 bp ATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGGAAGAGAGGTTCAACTaGGAAGACACTGAAGTCTCT +
Preference number: 5 (lower is better)
Translates to: IELSETSVWVGWRGALLLEERFN*EDTEVS
Trigger: AGAGACTTCAGTGTCTTCCAAGTTGAACCTCTCTTC...CAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CAA 90 bp CAGAAGTGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGGCAATCACCATATCTaGAAGAAAACTCCTGCAGGG +
Preference number: 5 (lower is better)
Translates to: QKCDIELSETSVWVGWRGGNHHI*KKTPAG
Trigger: CCCTGCAGGAGTTTTCTTCAAGATATGGTGATTGCC...TCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACACTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371778.5
CDS-3UTR CAA 90 bp GAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGACGTTAACTCATCTACTGTaGTGTTCCCTTGTATCACAT +
Preference number: 5 (lower is better)
Translates to: ELSETSVWVGWRGALLLTLTHLL*CSLVSH
Trigger: ATGTGATACAAGGGAACACAACAGTAGATGAGTTAA...CGTCAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CAA 90 bp ATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGTATATCTTCCTGTTGTaGGGCTGTGAAGATCTCCAT +
Preference number: 5 (lower is better)
Translates to: IELSETSVWVGWRGALLLYIFLL*GCEDLH
Trigger: ATGGAGATCTTCACAGCCCAACAACAGGAAGATATA...CAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CAA 90 bp ATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGCTTTATATCTTCCTGTaGTTGGGCTGTGAAGATCTC +
Preference number: 5 (lower is better)
Translates to: IELSETSVWVGWRGALLLLYIFL*LGCEDL
Trigger: GAGATCTTCACAGCCCAACAACAGGAAGATATAAAG...CAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CAA 90 bp TGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTTCCTCTTCTTGTTCTTaGCGAATCTGCTCCAAACGA +
Preference number: 5 (lower is better)
Translates to: CDIELSETSVWVGWRGALSSSCS*RICSKR
Trigger: TCGTTTGGAGCAGATTCGCAAAGAACAAGAAGAGGA...AAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CAA 90 bp ATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGAAGGTGCTCAGTAACTaGTACTCATCCCATGGAAAT +
Preference number: 5 (lower is better)
Translates to: IELSETSVWVGWRGALLLKVLSN*YSSHGN
Trigger: ATTTCCATGGGATGAGTACAAGTTACTGAGCACCTT...CAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CAA 90 bp ATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGTATCCTCTAAGCCCCTaGTGCAAAAATGGAATCATC +
Preference number: 5 (lower is better)
Translates to: IELSETSVWVGWRGALLLYPLSP*CKNGII
Trigger: GATGATTCCATTTTTGCACAAGGGGCTTAGAGGATA...CAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS TCA 90 bp AACATCGGTGATTTGTTCTTCCGACTGTTCCCGGGTCTGTGCAGGTaGAGATCTTCTTCCCACTGTAAGTCGATGGCAGGGATAAGAGAG +
Preference number: 5 (lower is better)
Translates to: NIGDLFFRLFPGLCR*RSSSHCKSMAGIRE
Trigger: CTCTCTTATCCCTGCCATCGACTTACAGTGGGAAGAAGATCTTCACCTGCACAGACCCGGGAACAGTCGGAAGAACAAATCACCGATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396153.7
ENST00000472808.1
ENST00000494400.5
CDS-3UTR CAA 90 bp CAGAAGTGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAAGAAATCTTGCTCTGTaGGAGTCCTTTGTCAGATCC +
Preference number: 5 (lower is better)
Translates to: QKCDIELSETSVWVGWRGRNLAL*ESFVRS
Trigger: GGATCTGACAAAGGACTCCAACAGAGCAAGATTTCT...TCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACACTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CAA 90 bp AAGAGGCAGAAGTGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGTTGAGTCCGAATGGTTaGTGCCACAACACTGCCAAA +
Preference number: 5 (lower is better)
Translates to: KRQKCDIELSETSVWVGWLSPNG*CHNTAK
Trigger: TTTGGCAGTGTTGTGGCACAAACCATTCGGACTCAA...CCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACACTTCTGCCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CAA 90 bp AGCAGTCCAAGAACACAAGGGAGTAAACTGGAATGGGGGATGACAAAGAGTCCTCAGCATTTTCTTCCTTaGGCTCAGGAGGCAGGGCTT +
Preference number: 5 (lower is better)
Translates to: SSPRTQGSKLEWGMTKSPQHFLP*AQEAGL
Trigger: AAGCCCTGCCTCCTGAGCCAAAGGAAGAAAATGCTG...AGGACTCTTTGTCATCCCCCATTCCAGTTTACTCCCTTGTGTTCTTGGACTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CAA 90 bp TGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTAAGGTGCTCAGTAACTaGTACTCATCCCATGGAAAT +
Preference number: 5 (lower is better)
Translates to: CDIELSETSVWVGWRGALKVLSN*YSSHGN
Trigger: ATTTCCATGGGATGAGTACAAGTTACTGAGCACCTT...AAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CAA 90 bp ATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTCCTGAGTGATCACTCACACTaGAACAATGCATTCGTCATT +
Preference number: 5 (lower is better)
Translates to: IELSETSVWVGWRGALLLSDHSH*NNAFVI
Trigger: AATGACGAATGCATTGTTCAAGTGTGAGTGATCACT...CAGGAGAAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS GCA 90 bp TTCCTCTTCTTGTTCTTTGCGAATCTGCTCCAAACGAAACTGTTCTaGCATCTCTCTCTCGTGAGCTTCCCTCTTTGCTCTGTCAGCCTC +
Preference number: 5 (lower is better)
Translates to: FLFLFFANLLQTKLF*HLSLVSFPLCSVSL
Trigger: GAGGCTGACAGAGCAAAGAGGGAAGCTCACGAGAGAGAGATGGCAGAACAGTTTCGTTTGGAGCAGATTCGCAAAGAACAAGAAGAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CAA 90 bp AAGAGGCAGAAGTGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGTGTGGTATTACACCATaGATAGCTGCCACTAAGTCC +
Preference number: 5 (lower is better)
Translates to: KRQKCDIELSETSVWVGWCGITP*IAATKS
Trigger: GGACTTAGTGGCAGCTATCAATGGTGTAATACCACA...CCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACACTTCTGCCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371778.5
ENST00000396153.7
CDS-3UTR CAA 90 bp TGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCTGCCAAAGTGTCTATaGCACATAGTGAGAAATCTT +
Preference number: 5 (lower is better)
Translates to: CDIELSETSVWVGWRGALLPKCL*HIVRNL
Trigger: AAGATTTCTCACTATGTGCAATAGACACTTTGGCAG...AAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CAA 90 bp AAGAGGCAGAAGTGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGTTTTCTGGCATCATaGGAGATTTTCTCAAGGCAG +
Preference number: 5 (lower is better)
Translates to: KRQKCDIELSETSVWVGWRFLAS*EIFSRQ
Trigger: CTGCCTTGAGAAAATCTCCAATGATGCCAGAAAACG...CCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACACTTCTGCCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CAA 90 bp AGCAGTCCAAGAACACAAGGGAGTAAACTGGAATGGGGGATGACAAAGAGTCCTCCAGATACTGAAGTTTaGGTACTGGCCTCTCTGCAC +
Preference number: 5 (lower is better)
Translates to: SSPRTQGSKLEWGMTKSPPDTEV*VLASLH
Trigger: GTGCAGAGAGGCCAGTACCAAAACTTCAGTATCTGG...AGGACTCTTTGTCATCCCCCATTCCAGTTTACTCCCTTGTGTTCTTGGACTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CAA 90 bp AGCAGTCCAAGAACACAAGGGAGTAAACTGGAATGGGGGATGACAAAGAGTCCTTACTTTGGGGGAAATTaGCCAGAGCTCTCCACCTCT +
Preference number: 5 (lower is better)
Translates to: SSPRTQGSKLEWGMTKSPYFGGN*PELSTS
Trigger: AGAGGTGGAGAGCTCTGGCAAATTTCCCCCAAAGTA...AGGACTCTTTGTCATCCCCCATTCCAGTTTACTCCCTTGTGTTCTTGGACTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS GCA 90 bp TATTCAACCCTGAAGTCCAGCATCCGAGGTTGCCTTTCTACAATCTaGCTGGATGGCATTACAGGTCGAAACGCTGAAGAAGAAGAGGAA +
Preference number: 5 (lower is better)
Translates to: YSTLKSSIRGCLSTI*LDGITGRNAEEEEE
Trigger: TTCCTCTTCTTCTTCAGCGTTTCGACCTGTAATGCCATCCAGGCAGATTGTAGAAAGGCAACCTCGGATGCTGGACTTCAGGGTTGAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000487898.1
CDS CCA 90 bp CACATTGAGTCGTCTGTAGCAGAAGTTGGCCAGCCCTCCCATAATTaGTGGCGAACGGGGATACTTGTAAGGTCATACACATTTCTCTTT +
Preference number: 5 (lower is better)
Translates to: HIESSVAEVGQPSHN*WRTGILVRSYTFLF
Trigger: AAAGAGAAATGTGTATGACCTTACAAGTATCCCCGTTCGCCACCAATTATGGGAGGGCTGGCCAACTTCTGCTACAGACGACTCAATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CAA 90 bp AAGAGGCAGAAGTGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGTGTGAGCAGAACACGTaGGTTAACACACTTTCATCA +
Preference number: 5 (lower is better)
Translates to: KRQKCDIELSETSVWVGWCEQNT*VNTLSS
Trigger: TGATGAAAGTGTGTTAACCAACGTGTTCTGCTCACA...CCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACACTTCTGCCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CAA 90 bp TATCAAATATACAGCATCCTGGTGTCACAGAACAGACAGAACTGTCCTAGACACCTCTGTTGGAGTCCTTaGTCAGATCCCAAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: YQIYSILVSQNRQNCPRHLCWSP*SDPKPR
Trigger: CCTGGGCTTGGGATCTGACAAAGGACTCCAACAGAG...GTGTCTAGGACAGTTCTGTCTGTTCTGTGACACCAGGATGCTGTATATTTGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CAA 90 bp TTGTTGATAGGCAAGGTGCTTAAACACCAAGTGACAAGGTCCAAATGTGTGAGGAAGACAATCTGGAGCTaGTTGCTGGCCAGGAAACGC +
Preference number: 5 (lower is better)
Translates to: LLIGKVLKHQVTRSKCVRKTIWS*LLARKR
Trigger: GCGTTTCCTGGCCAGCAACAAGCTCCAGATTGTCTT...CCTCACACATTTGGACCTTGTCACTTGGTGTTTAAGCACCTTGCCTATCAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CAA 90 bp AAGAGGCAGAAGTGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGAAGGTGCTCAGTAACTaGTACTCATCCCATGGAAAT +
Preference number: 5 (lower is better)
Translates to: KRQKCDIELSETSVWVGWKVLSN*YSSHGN
Trigger: ATTTCCATGGGATGAGTACAAGTTACTGAGCACCTT...CCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACACTTCTGCCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CAA 90 bp TGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGAGCCCTTCCAATAATGATTTATTaGGGTCCAGTTGAGTTACGT +
Preference number: 5 (lower is better)
Translates to: CDIELSETSVWVGWRGALPIMIY*GPVELR
Trigger: ACGTAACTCAACTGGACCCAAATAAATCATTATTGG...AAGGGCTCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371778.5
ENST00000396153.7
CDS-3UTR CAA 90 bp AAGAGGCAGAAGTGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGAAGGAAAAGGGTTTCTaGAGGGAACAACTTTACCTC +
Preference number: 5 (lower is better)
Translates to: KRQKCDIELSETSVWVGWKEKGF*REQLYL
Trigger: GAGGTAAAGTTGTTCCCTCAAGAAACCCTTTTCCTT...CCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACACTTCTGCCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CAA 90 bp AACAAAAGCTGTAACCTTCTCCTTGCAGTGGTATCCTTGATGGTGGCTTTGGTCTTGAGTCCGAATGGTTaGTGCCACAACACTGCCAAA +
Preference number: 5 (lower is better)
Translates to: NKSCNLLLAVVSLMVALVLSPNG*CHNTAK
Trigger: TTTGGCAGTGTTGTGGCACAAACCATTCGGACTCAA...GACCAAAGCCACCATCAAGGATACCACTGCAAGGAGAAGGTTACAGCTTTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494400.5
CDS-3UTR CAA 90 bp CAGAAGTGTGACATTGAATTGAGTGAGACGAGCGTGTGGGTGGGTTGGCGAGGATTAACTCATCTACTGTaGTGTTCCCTTGTATCACAT +
Preference number: 5 (lower is better)
Translates to: QKCDIELSETSVWVGWRGLTHLL*CSLVSH
Trigger: ATGTGATACAAGGGAACACAACAGTAGATGAGTTAA...TCCTCGCCAACCCACCCACACGCTCGTCTCACTCAATTCAATGTCACACTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS TCA 90 bp TGTCTTCAAGTACCACATCAACATTTCTGTCTCTGTATTCAACCCTaGAGTCCAGCATCCGAGGTTGCCTTTCTACAATCTGCCTGGATG +
Preference number: 5 (lower is better)
Translates to: CLQVPHQHFCLCIQP*SPASEVAFLQSAWM
Trigger: CATCCAGGCAGATTGTAGAAAGGCAACCTCGGATGCTGGACTTCAGGGTTGAATACAGAGACAGAAATGTTGATGTGGTACTTGAAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000487898.1
CDS TCA 90 bp TACTCCCGCTGGACTTCTCGGTGGGTGATGATCAGCATGAAGTTTTaGTTTAATGACTCCTGCAGGGCACTGAAAGGGTTGAAAGAAAAA +
Preference number: 5 (lower is better)
Translates to: YSRWTSRWVMISMKF*FNDSCRALKGLKEK
Trigger: TTTTTCTTTCAACCCTTTCAGTGCCCTGCAGGAGTCATTAAATCAAAACTTCATGCTGATCATCACCCACCGAGAAGTCCAGCGGGAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494400.5
CDS-3UTR CAA 90 bp CCTCCAATAATGATTTATTTGGGTCCAGTTGAGTTACCCAAGTTTATTCAGCATACAATCTGGAGCTTGTaGCTGGCCAGGAAACGCCGC +
Preference number: 5 (lower is better)
Translates to: PPIMIYLGPVELPKFIQHTIWSL*LARKRR
Trigger: GCGGCGTTTCCTGGCCAGCAACAAGCTCCAGATTGT...ATGCTGAATAAACTTGGGTAACTCAACTGGACCCAAATAAATCATTATTGGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494400.5
CDS-3UTR CAA 90 bp TTGTTGATAGGCAAGGTGCTTAAACACCAAGTGACAAGGTCCAAATGTGTGAGGACAATGCATTCGTCATaGAAGGAGGGTGAAGTGCAG +
Preference number: 5 (lower is better)
Translates to: LLIGKVLKHQVTRSKCVRTMHSS*KEGEVQ
Trigger: CTGCACTTCACCCTCCTTCAATGACGAATGCATTGT...CCTCACACATTTGGACCTTGTCACTTGGTGTTTAAGCACCTTGCCTATCAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CAA 90 bp AGCAGTCCAAGAACACAAGGGAGTAAACTGGAATGGGGGATGACAAAGAGTCCTGTTGAGTCCCCAAGTTaGCTCTCTTCAACATATGAA +
Preference number: 5 (lower is better)
Translates to: SSPRTQGSKLEWGMTKSPVESPS*LSSTYE
Trigger: TTCATATGTTGAAGAGAGCAAACTTGGGGACTCAAC...AGGACTCTTTGTCATCCCCCATTCCAGTTTACTCCCTTGTGTTCTTGGACTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CAA 90 bp AAAATGGTCTCAAACTTGGCACACTGTCGGGGACACCCTGGGCACCAAACAAAACCAATAATGATTTATTaGGGTCCAGTTGAGTTACCC +
Preference number: 5 (lower is better)
Translates to: KMVSNLAHCRGHPGHQTKPIMIY*GPVELP
Trigger: GGGTAACTCAACTGGACCCAAATAAATCATTATTGG...TTTTGTTTGGTGCCCAGGGTGTCCCCGACAGTGTGCCAAGTTTGAGACCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000494400.5
CDS CCA 90 bp GACTGGGAATTTCGAAAGGATACATTACATAGCCATGTCCAAAAGTaGAACTTGCTCCAGGTTTCCCATTCAATTCCTGCGAGAGGAACT +
Preference number: 5 (lower is better)
Translates to: DWEFRKDTLHSHVQK*NLLQVSHSIPARGT
Trigger: AGTTCCTCTCGCAGGAATTGAATGGGAAACCTGGAGCAAGTTCCACTTTTGGACATGGCTATGTAATGTATCCTTTCGAAATTCCCAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472808.1
CDS-3UTR CAA 90 bp AACAAAAGCTGTAACCTTCTCCTTGCAGTGGTATCCTTGATGGTGGCTTTGGTCTGTGAGCAGAACACGTaGGTTAACACACTTTCATCA +
Preference number: 5 (lower is better)
Translates to: NKSCNLLLAVVSLMVALVCEQNT*VNTLSS
Trigger: TGATGAAAGTGTGTTAACCAACGTGTTCTGCTCACA...GACCAAAGCCACCATCAAGGATACCACTGCAAGGAGAAGGTTACAGCTTTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494400.5
CDS-3UTR CAA 90 bp CTCTCATTCATCTTTGATTCTGGATGCTTACAATCCAGAGATGAACATCTGTGTCCTGAGAAGTTCAGGTaGTACTCCCGCTGGACTTCT +
Preference number: 5 (lower is better)
Translates to: LSFIFDSGCLQSRDEHLCPEKFR*YSRWTS
Trigger: AGAAGTCCAGCGGGAGTACAACCTGAACTTCTCAGG...ACACAGATGTTCATCTCTGGATTGTAAGCATCCAGAATCAAAGATGAATGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CAA 90 bp AGCAGTCCAAGAACACAAGGGAGTAAACTGGAATGGGGGATGACAAAGAGTCCTTTAACTCATCTACTGTaGTGTTCCCTTGTATCACAT +
Preference number: 5 (lower is better)
Translates to: SSPRTQGSKLEWGMTKSPLTHLL*CSLVSH
Trigger: ATGTGATACAAGGGAACACAACAGTAGATGAGTTAA...AGGACTCTTTGTCATCCCCCATTCCAGTTTACTCCCTTGTGTTCTTGGACTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CAA 90 bp AATGACAATATAAGTGGGGAAGGCCCAGAGGGGATTCTATTAAGAATGGAATGGTCCTCTTCTTGTTCTTaGCGAATCTGCTCCAAACGA +
Preference number: 5 (lower is better)
Translates to: NDNISGEGPEGILLRMEWSSSCS*RICSKR
Trigger: TCGTTTGGAGCAGATTCGCAAAGAACAAGAAGAGGA...CCATTCCATTCTTAATAGAATCCCCTCTGGGCCTTCCCCACTTATATTGTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494400.5
CDS-3UTR CAA 90 bp CTATTAAATGACAATATAAGTGGGGAAGGCCCAGAGGGGATTCTATTAAGAATGCTTGCAGTGGTATCCTaGATGGTGGCTTTGGTCACT +
Preference number: 5 (lower is better)
Translates to: LLNDNISGEGPEGILLRMLAVVS*MVALVT
Trigger: AGTGACCAAAGCCACCATCAAGGATACCACTGCAAG...CATTCTTAATAGAATCCCCTCTGGGCCTTCCCCACTTATATTGTCATTTAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494400.5
CDS-3UTR CAA 90 bp ACCCAAGTTTATTCAGCATTCATGGCAAATCTGGATTCTTCATTCCTAGCCTATAAAATGGTCTCAAACTaGGCACACTGTCGGGGACAC +
Preference number: 5 (lower is better)
Translates to: TQVYSAFMANLDSSFLAYKMVSN*AHCRGH
Trigger: GTGTCCCCGACAGTGTGCCAAGTTTGAGACCATTTT...ATAGGCTAGGAATGAAGAATCCAGATTTGCCATGAATGCTGAATAAACTTGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494400.5
CDS-3UTR CAA 90 bp CAAATGAAAAAGTCTATACTTTGGGGGAAATTTGCCAGAGCTCTCCACCTCTTATCCTCTTCTTGTTCTTaGCGAATCTGCTCCAAACGA +
Preference number: 5 (lower is better)
Translates to: QMKKSILWGKFARALHLLSSSCS*RICSKR
Trigger: TCGTTTGGAGCAGATTCGCAAAGAACAAGAAGAGGA...TAAGAGGTGGAGAGCTCTGGCAAATTTCCCCCAAAGTATAGACTTTTTCATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CAA 90 bp CAAATGAAAAAGTCTATACTTTGGGGGAAATTTGCCAGAGCTCTCCACCTCTTATTTATTTGGGTCCAGTaGAGTTACGTCTCTCCTAGG +
Preference number: 5 (lower is better)
Translates to: QMKKSILWGKFARALHLLFIWVQ*SYVSPR
Trigger: CCTAGGAGAGACGTAACTCAACTGGACCCAAATAAA...TAAGAGGTGGAGAGCTCTGGCAAATTTCCCCCAAAGTATAGACTTTTTCATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CAA 90 bp AACAAAAGCTGTAACCTTCTCCTTGCAGTGGTATCCTTGATGGTGGCTTTGGTCTTTATTTGGGTCCAGTaGAGTTACCCAAGTTTATTC +
Preference number: 5 (lower is better)
Translates to: NKSCNLLLAVVSLMVALVFIWVQ*SYPSLF
Trigger: GAATAAACTTGGGTAACTCAACTGGACCCAAATAAA...GACCAAAGCCACCATCAAGGATACCACTGCAAGGAGAAGGTTACAGCTTTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494400.5
CDS-3UTR CAA 90 bp TTGTTGATAGGCAAGGTGCTTAAACACCAAGTGACAAGGTCCAAATGTGTGAGGGAAAGCAAGAGAGAATaGTGTTCAGTTTACACTGAT +
Preference number: 5 (lower is better)
Translates to: LLIGKVLKHQVTRSKCVRESKRE*CSVYTD
Trigger: ATCAGTGTAAACTGAACACAATTCTCTCTTGCTTTC...CCTCACACATTTGGACCTTGTCACTTGGTGTTTAAGCACCTTGCCTATCAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CAA 90 bp TATCAAATATACAGCATCCTGGTGTCACAGAACAGACAGAACTGTCCTAGACACGCTCATCAGATTTTGTaGATAGGCAAGGTGCTTAAA +
Preference number: 5 (lower is better)
Translates to: YQIYSILVSQNRQNCPRHAHQIL*IGKVLK
Trigger: TTTAAGCACCTTGCCTATCAACAAAATCTGATGAGC...GTGTCTAGGACAGTTCTGTCTGTTCTGTGACACCAGGATGCTGTATATTTGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CAA 90 bp TATCAAATATACAGCATCCTGGTGTCACAGAACAGACAGAACTGTCCTAGACACAAAGGCAATGGGAAATaGGCAACACTTCCTTTAACT +
Preference number: 5 (lower is better)
Translates to: YQIYSILVSQNRQNCPRHKGNGK*ATLPLT
Trigger: AGTTAAAGGAAGTGTTGCCAATTTCCCATTGCCTTT...GTGTCTAGGACAGTTCTGTCTGTTCTGTGACACCAGGATGCTGTATATTTGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CAA 90 bp ACCCAAGTTTATTCAGCATTCATGGCAAATCTGGATTCTTCATTCCTAGCCTATTATATCTTCCTGTTGTaGGGCTGTGAAGATCTCCAT +
Preference number: 5 (lower is better)
Translates to: TQVYSAFMANLDSSFLAYYIFLL*GCEDLH
Trigger: ATGGAGATCTTCACAGCCCAACAACAGGAAGATATA...ATAGGCTAGGAATGAAGAATCCAGATTTGCCATGAATGCTGAATAAACTTGGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494400.5
CDS-3UTR CAA 90 bp CTCTCATTCATCTTTGATTCTGGATGCTTACAATCCAGAGATGAACATCTGTGTATTCACATTGTGTGCTaGAACAGTTTCCCTATGCTG +
Preference number: 5 (lower is better)
Translates to: LSFIFDSGCLQSRDEHLCIHIVC*NSFPML
Trigger: CAGCATAGGGAAACTGTTCAAGCACACAATGTGAAT...ACACAGATGTTCATCTCTGGATTGTAAGCATCCAGAATCAAAGATGAATGAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS-3UTR CAA 90 bp TATCAAATATACAGCATCCTGGTGTCACAGAACAGACAGAACTGTCCTAGACACTGCTCTCATTCATCTTaGATTCTGGATGCTTACAAT +
Preference number: 5 (lower is better)
Translates to: YQIYSILVSQNRQNCPRHCSHSS*ILDAYN
Trigger: ATTGTAAGCATCCAGAATCAAAGATGAATGAGAGCA...GTGTCTAGGACAGTTCTGTCTGTTCTGTGACACCAGGATGCTGTATATTTGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS TCA 90 bp ATCTACTGTTGTGTTCCCTTGTATCACATTCAACACTTCATTAGATaGTCGCTTTCCCATAATAATCAGGAAAAGCGGAAACTGATCCGT +
Preference number: 5 (lower is better)
Translates to: IYCCVPLYHIQHFIR*SLSHNNQEKRKLIR
Trigger: ACGGATCAGTTTCCGCTTTTCCTGATTATTATGGGAAAGCGATCATCTAATGAAGTGTTGAATGTGATACAAGGGAACACAACAGTAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS-3UTR CAA 90 bp CCAATAATGATTTATTTGGGTCCAGTTGAGTTACCCAAGTTTATTCAGCATTCAAAACTGATCCGTTTTTaGAGTCCGAATGGTTTGTGC +
Preference number: 5 (lower is better)
Translates to: PIMIYLGPVELPKFIQHSKLIRF*SPNGLC
Trigger: GCACAAACCATTCGGACTCAAAAAACGGATCAGTTT...TGAATGCTGAATAAACTTGGGTAACTCAACTGGACCCAAATAAATCATTATTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494400.5
CDS GCA 72 bp GCACTCGGTAACCTTCAGGCGCCCCGGCCGCCCGCCTaGAACCTGCGGAGCCCGCGTCGCAGCAGCCCGGAC +
Preference number: 6 (lower is better)
Translates to: ALGNLQAPRPPA*NLRSPRRSSPD
Trigger: GTCCGGGCTGCTGCGACGCGGGCTCCGCAGGTTGCAGGCGGGCGGCCGGGGCGCCTGAAGGTTACCGAGTGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS CCA 72 bp GCCGAGTTCCGCGGCTCCGGGAGCGAAGCGCGCACCTaGGAGGCAGACGGCACCTCCTGCGACCGTCGCCGC +
Preference number: 6 (lower is better)
Translates to: AEFRGSGSEART*EADGTSCDRRR
Trigger: GCGGCGACGGTCGCAGGAGGTGCCGTCTGCCTCCCAGGTGCGCGCTTCGCTCCCGGAGCCGCGGAACTCGGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS CCA 72 bp GCGGAGCCCGCGTCGCAGCAGCCCGGACAGGAAGATTaGTCTGGATGTGGGTCCGGTCTTACAGTCGCGGGC +
Preference number: 6 (lower is better)
Translates to: AEPASQQPGQED*SGCGSGLTVAG
Trigger: GCCCGCGACTGTAAGACCGGACCCACATCCAGACCAATCTTCCTGTCCGGGCTGCTGCGACGCGGGCTCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS GCA 72 bp CCGGTCTTACAGTCGCGGGCCAGGATGAGGGCAGGTTaGGACAGCGCGCACCCGGATACCTTCAGCGGCGTT +
Preference number: 6 (lower is better)
Translates to: PVLQSRARMRAG*DSAHPDTFSGV
Trigger: AACGCCGCTGAAGGTATCCGGGTGCGCGCTGTCGCAACCTGCCCTCATCCTGGCCCGCGACTGTAAGACCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS CCA 72 bp GCCCGCGTCGCAGCAGCCCGGACAGGAAGATTGGTCTaGATGTGGGTCCGGTCTTACAGTCGCGGGCCAGGA +
Preference number: 6 (lower is better)
Translates to: ARVAAARTGRLV*MWVRSYSRGPG
Trigger: TCCTGGCCCGCGACTGTAAGACCGGACCCACATCCAGACCAATCTTCCTGTCCGGGCTGCTGCGACGCGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS CAA 72 bp TCCGGTCTTACAGTCGCGGGCCAGGATGAGGGCAGGTaGCGACAGCGCGCACCCGGATACCTTCAGCGGCGT +
Preference number: 6 (lower is better)
Translates to: SGLTVAGQDEGR*RQRAPGYLQRR
Trigger: ACGCCGCTGAAGGTATCCGGGTGCGCGCTGTCGCAACCTGCCCTCATCCTGGCCCGCGACTGTAAGACCGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS CAA 72 bp TGCGGAGCCCGCGTCGCAGCAGCCCGGACAGGAAGATaGGTCTGGATGTGGGTCCGGTCTTACAGTCGCGGG +
Preference number: 6 (lower is better)
Translates to: CGARVAAARTGR*VWMWVRSYSRG
Trigger: CCCGCGACTGTAAGACCGGACCCACATCCAGACCAATCTTCCTGTCCGGGCTGCTGCGACGCGGGCTCCGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS TCA 72 bp TGGATGTGGGTCCGGTCTTACAGTCGCGGGCCAGGATaGGGGCAGGTTGCGACAGCGCGCACCCGGATACCT +
Preference number: 6 (lower is better)
Translates to: WMWVRSYSRGPG*GQVATARTRIP
Trigger: AGGTATCCGGGTGCGCGCTGTCGCAACCTGCCCTCATCCTGGCCCGCGACTGTAAGACCGGACCCACATCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396153.7
CDS CCA 72 bp TGCTGGCCAGGAAACGCCGCTCCAAGAACTCGCCACTaGGGGTCCGGATCCGCAGTTTGCTCACAGGCTCAG +
Preference number: 6 (lower is better)
Translates to: CWPGNAAPRTRH*GSGSAVCSQAQ
Trigger: CTGAGCCTGTGAGCAAACTGCGGATCCGGACCCCCAGTGGCGAGTTCTTGGAGCGGCGTTTCCTGGCCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS CAA 90 bp AAACGCCGCTCCAAGAACTCGCCACTGGGGGTCCGGATCCGCAGTTaGCTCACAGGCTCAGCATTTTCTTCCTTTGGCTCAGGAGGCAGG +
Preference number: 6 (lower is better)
Translates to: KRRSKNSPLGVRIRS*LTGSAFSSFGSGGR
Trigger: CCTGCCTCCTGAGCCAAAGGAAGAAAATGCTGAGCCTGTGAGCAAACTGCGGATCCGGACCCCCAGTGGCGAGTTCTTGGAGCGGCGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS CCA 72 bp TCAATGCCAGTACATGCCACTGCAGCGTTCAAACGCTaGGAAGAAGACTCCCTTGTGGCACCGGAAACCCAC +
Preference number: 6 (lower is better)
Translates to: SMPVHATAAFKR*EEDSLVAPETH
Trigger: GTGGGTTTCCGGTGCCACAAGGGAGTCTTCTTCCCAGCGTTTGAACGCTGCAGTGGCATGTACTGGCATTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487898.1
CDS CAA 72 bp TCCAAGAACTCGCCACTGGGGGTCCGGATCCGCAGTTaGCTCACAGGCTCAGCATTTTCTTCCTTTGGCTCA +
Preference number: 6 (lower is better)
Translates to: SKNSPLGVRIRS*LTGSAFSSFGS
Trigger: TGAGCCAAAGGAAGAAAATGCTGAGCCTGTGAGCAAACTGCGGATCCGGACCCCCAGTGGCGAGTTCTTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS TCA 72 bp CTCGTGAGCTTCCCTCTTTGCTCTGTCAGCCTCAAGTaGAAGGCGATAGGCCTCATCTTGCTCTCTCTTCAC +
Preference number: 6 (lower is better)
Translates to: LVSFPLCSVSLK*KAIGLILLSLH
Trigger: GTGAAGAGAGAGCAAGATGAGGCCTATCGCCTTTCACTTGAGGCTGACAGAGCAAAGAGGGAAGCTCACGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS TCA 72 bp GATTTGTTCTTCCGACTGTTCCCGGGTCTGTGCAGGTaGAGATCTTCTTCCCACTGTAAGTCGATGGCAGGG +
Preference number: 6 (lower is better)
Translates to: DLFFRLFPGLCR*RSSSHCKSMAG
Trigger: CCCTGCCATCGACTTACAGTGGGAAGAAGATCTTCACCTGCACAGACCCGGGAACAGTCGGAAGAACAAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396153.7
ENST00000472808.1
ENST00000494400.5
CDS CAA 90 bp GGAAATCCTTTGGAAGCTACAAAATCAAAGACAATCTGGAGCTTGTaGCTGGCCAGGAAACGCCGCTCCAAGAACTCGCCACTGGGGGTC +
Preference number: 6 (lower is better)
Translates to: GNPLEATKSKTIWSL*LARKRRSKNSPLGV
Trigger: GACCCCCAGTGGCGAGTTCTTGGAGCGGCGTTTCCTGGCCAGCAACAAGCTCCAGATTGTCTTTGATTTTGTAGCTTCCAAAGGATTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS CAA 90 bp CATGGAAATCCTTTGGAAGCTACAAAATCAAAGACAATCTGGAGCTaGTTGCTGGCCAGGAAACGCCGCTCCAAGAACTCGCCACTGGGG +
Preference number: 6 (lower is better)
Translates to: HGNPLEATKSKTIWS*LLARKRRSKNSPLG
Trigger: CCCCAGTGGCGAGTTCTTGGAGCGGCGTTTCCTGGCCAGCAACAAGCTCCAGATTGTCTTTGATTTTGTAGCTTCCAAAGGATTTCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS GCA 72 bp TGGAAGCTACAAAATCAAAGACAATCTGGAGCTTGTTaGTGGCCAGGAAACGCCGCTCCAAGAACTCGCCAC +
Preference number: 6 (lower is better)
Translates to: WKLQNQRQSGAC*WPGNAAPRTRH
Trigger: GTGGCGAGTTCTTGGAGCGGCGTTTCCTGGCCAGCAACAAGCTCCAGATTGTCTTTGATTTTGTAGCTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS CCA 72 bp AAGCTACAAAATCAAAGACAATCTGGAGCTTGTTGCTaGCCAGGAAACGCCGCTCCAAGAACTCGCCACTGG +
Preference number: 6 (lower is better)
Translates to: KLQNQRQSGACC*PGNAAPRTRHW
Trigger: CCAGTGGCGAGTTCTTGGAGCGGCGTTTCCTGGCCAGCAACAAGCTCCAGATTGTCTTTGATTTTGTAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS CCA 72 bp TCGTCTGTAGCAGAAGTTGGCCAGCCCTCCCATAATTaGTGGCGAACGGGGATACTTGTAAGGTCATACACA +
Preference number: 6 (lower is better)
Translates to: SSVAEVGQPSHN*WRTGILVRSYT
Trigger: TGTGTATGACCTTACAAGTATCCCCGTTCGCCACCAATTATGGGAGGGCTGGCCAACTTCTGCTACAGACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396153.7
ENST00000494400.5
CDS GCA 72 bp CTGAAGTCCAGCATCCGAGGTTGCCTTTCTACAATCTaGCTGGATGGCATTACAGGTCGAAACGCTGAAGAA +
Preference number: 6 (lower is better)
Translates to: LKSSIRGCLSTI*LDGITGRNAEE
Trigger: TTCTTCAGCGTTTCGACCTGTAATGCCATCCAGGCAGATTGTAGAAAGGCAACCTCGGATGCTGGACTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000487898.1
CDS CCA 72 bp AGTCCAGCATCCGAGGTTGCCTTTCTACAATCTGCCTaGATGGCATTACAGGTCGAAACGCTGAAGAAGAAG +
Preference number: 6 (lower is better)
Translates to: SPASEVAFLQSA*MALQVETLKKK
Trigger: CTTCTTCTTCAGCGTTTCGACCTGTAATGCCATCCAGGCAGATTGTAGAAAGGCAACCTCGGATGCTGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000487898.1
CDS CAA 72 bp GTCTCTGTATTCAACCCTGAAGTCCAGCATCCGAGGTaGCCTTTCTACAATCTGCCTGGATGGCATTACAGG +
Preference number: 6 (lower is better)
Translates to: VSVFNPEVQHPR*PFYNLPGWHYR
Trigger: CCTGTAATGCCATCCAGGCAGATTGTAGAAAGGCAACCTCGGATGCTGGACTTCAGGGTTGAATACAGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000487898.1
CDS CAA 72 bp CCTTTGGAAGCTACAAAATCAAAGACAATCTGGAGCTaGTTGCTGGCCAGGAAACGCCGCTCCAAGAACTCG +
Preference number: 6 (lower is better)
Translates to: PLEATKSKTIWS*LLARKRRSKNS
Trigger: CGAGTTCTTGGAGCGGCGTTTCCTGGCCAGCAACAAGCTCCAGATTGTCTTTGATTTTGTAGCTTCCAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS GCA 72 bp TCTCTGTATTCAACCCTGAAGTCCAGCATCCGAGGTTaGCTTTCTACAATCTGCCTGGATGGCATTACAGGT +
Preference number: 6 (lower is better)
Translates to: SLYSTLKSSIRG*LSTICLDGITG
Trigger: ACCTGTAATGCCATCCAGGCAGATTGTAGAAAGGCAACCTCGGATGCTGGACTTCAGGGTTGAATACAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000487898.1
CDS CCA 72 bp GGAAATCCTTTGGAAGCTACAAAATCAAAGACAATCTaGAGCTTGTTGCTGGCCAGGAAACGCCGCTCCAAG +
Preference number: 6 (lower is better)
Translates to: GNPLEATKSKTI*SLLLARKRRSK
Trigger: CTTGGAGCGGCGTTTCCTGGCCAGCAACAAGCTCCAGATTGTCTTTGATTTTGTAGCTTCCAAAGGATTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS CCA 72 bp TCTGTAGCAGAAGTTGGCCAGCCCTCCCATAATTGGTaGCGAACGGGGATACTTGTAAGGTCATACACATTT +
Preference number: 6 (lower is better)
Translates to: SVAEVGQPSHNW*RTGILVRSYTF
Trigger: AAATGTGTATGACCTTACAAGTATCCCCGTTCGCCACCAATTATGGGAGGGCTGGCCAACTTCTGCTACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396153.7
ENST00000494400.5
CDS CCA 72 bp TCACGTTCATCCTCGTCCTTTATATCTTCCTGTTGTTaGGCTGTGAAGATCTCCATTGCAGCCATGAGTCTC +
Preference number: 6 (lower is better)
Translates to: SRSSSSFISSCC*AVKISIAAMSL
Trigger: GAGACTCATGGCTGCAATGGAGATCTTCACAGCCCAACAACAGGAAGATATAAAGGACGAGGATGAACGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS GCA 72 bp GCATCATTGGAGATTTTCTCAAGGCAGATGACGCCATaGCAAATACTTCTCCATCATCCACCCCAAATTCTG +
Preference number: 6 (lower is better)
Translates to: ASLEIFSRQMTP*QILLHHPPQIL
Trigger: CAGAATTTGGGGTGGATGATGGAGAAGTATTTGGCATGGCGTCATCTGCCTTGAGAAAATCTCCAATGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396153.7
ENST00000472808.1
ENST00000494400.5
CDS CAA 72 bp CGAATGGTTTGTGCCACAACACTGCCAAAGTGTCTATaGCACATAGTGAGAAATCTTGCTCTGTTGGAGTCC +
Preference number: 6 (lower is better)
Translates to: RMVCATTLPKCL*HIVRNLALLES
Trigger: GGACTCCAACAGAGCAAGATTTCTCACTATGTGCAATAGACACTTTGGCAGTGTTGTGGCACAAACCATTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000472808.1
ENST00000494400.5
CDS CAA 72 bp TTCACGTTCATCCTCGTCCTTTATATCTTCCTGTTGTaGGGCTGTGAAGATCTCCATTGCAGCCATGAGTCT +
Preference number: 6 (lower is better)
Translates to: FTFILVLYIFLL*GCEDLHCSHES
Trigger: AGACTCATGGCTGCAATGGAGATCTTCACAGCCCAACAACAGGAAGATATAAAGGACGAGGATGAACGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS CAA 72 bp CCTGGAATGTCTCTCCTAGGAAAGGTGCTCAGTAACTaGTACTCATCCCATGGAAATCCTTTGGAAGCTACA +
Preference number: 6 (lower is better)
Translates to: PGMSLLGKVLSN*YSSHGNPLEAT
Trigger: TGTAGCTTCCAAAGGATTTCCATGGGATGAGTACAAGTTACTGAGCACCTTTCCTAGGAGAGACATTCCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494400.5
CDS GCA 72 bp AGGATACATTACATAGCCATGTCCAAAAGTGGAACTTaGTCCAGGTTTCCCATTCAATTCCTGCGAGAGGAA +
Preference number: 6 (lower is better)
Translates to: RIHYIAMSKSGT*SRFPIQFLREE
Trigger: TTCCTCTCGCAGGAATTGAATGGGAAACCTGGAGCAAGTTCCACTTTTGGACATGGCTATGTAATGTATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472808.1
CDS CCA 72 bp GATAGGCCTCATCTTGCTCTCTCTTCACATTTTCTCTaGCTTCACGTTCATCCTCGTCCTTTATATCTTCCT +
Preference number: 6 (lower is better)
Translates to: DRPHLALSSHFL*LHVHPRPLYLP
Trigger: AGGAAGATATAAAGGACGAGGATGAACGTGAAGCCAGAGAAAATGTGAAGAGAGAGCAAGATGAGGCCTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS CAA 90 bp CTGGAAAGTCCTGGAATGTCTCTCCTAGGAAAGGTGCTCAGTAACTaGTACTCATCCCATGGAAATCCTTTGGAAGCTACAAAATCAAAG +
Preference number: 6 (lower is better)
Translates to: LESPGMSLLGKVLSN*YSSHGNPLEATKSK
Trigger: CTTTGATTTTGTAGCTTCCAAAGGATTTCCATGGGATGAGTACAAGTTACTGAGCACCTTTCCTAGGAGAGACATTCCAGGACTTTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494400.5
CDS CAA 90 bp TCGCTTTCCCATAATAATCAGGAAAAGCGGAAACTGATCCGTTTTTaGAGTCCGAATGGTTTGTGCCACAACACTGCCAAAGTGTCTATT +
Preference number: 6 (lower is better)
Translates to: SLSHNNQEKRKLIRF*SPNGLCHNTAKVSI
Trigger: AATAGACACTTTGGCAGTGTTGTGGCACAAACCATTCGGACTCAAAAAACGGATCAGTTTCCGCTTTTCCTGATTATTATGGGAAAGCGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000472808.1
ENST00000494400.5
CDS CAA 72 bp CATAATAATCAGGAAAAGCGGAAACTGATCCGTTTTTaGAGTCCGAATGGTTTGTGCCACAACACTGCCAAA +
Preference number: 6 (lower is better)
Translates to: HNNQEKRKLIRF*SPNGLCHNTAK
Trigger: TTTGGCAGTGTTGTGGCACAAACCATTCGGACTCAAAAAACGGATCAGTTTCCGCTTTTCCTGATTATTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000472808.1
ENST00000494400.5
CDS CCA 72 bp TGCTCAGTAACTTGTACTCATCCCATGGAAATCCTTTaGAAGCTACAAAATCAAAGACAATCTGGAGCTTGT +
Preference number: 6 (lower is better)
Translates to: CSVTCTHPMEIL*KLQNQRQSGAC
Trigger: ACAAGCTCCAGATTGTCTTTGATTTTGTAGCTTCCAAAGGATTTCCATGGGATGAGTACAAGTTACTGAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5
CDS TCA 72 bp TGTGTTCCCTTGTATCACATTCAACACTTCATTAGATaGTCGCTTTCCCATAATAATCAGGAAAAGCGGAAA +
Preference number: 6 (lower is better)
Translates to: CVPLYHIQHFIR*SLSHNNQEKRK
Trigger: TTTCCGCTTTTCCTGATTATTATGGGAAAGCGATCATCTAATGAAGTGTTGAATGTGATACAAGGGAACACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371778.5
ENST00000396153.7
ENST00000494400.5