RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FADS1 (Homo sapiens)

Ensembl gene IDs: ENSG00000149485

Ensembl transcript IDs: ENST00000350997.12, ENST00000421879.5, ENST00000424501.5, ENST00000433932.5, ENST00000448607.1, ENST00000460649.5, ENST00000466716.5, ENST00000473263.1, ENST00000491310.5, ENST00000496123.6, ENST00000536991.5, ENST00000539419.5, ENST00000540767.5, ENST00000541683.1, ENST00000542506.5, ENST00000544309.5, ENST00000544696.5, ENST00000545245.5, ENST00000545405.5, ENST00000545986.1

Found 682 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTGACAAACCTCTCCATGGGTGGTGCATCTGACCCTATCCCAACATaGCTTAGGACGCTCATCTCCTTGACTGTCTGCCATCCCCTCCCA +
Preference number: 1 (lower is better)
Translates to: LTNLSMGGASDPIPT*LRTLISLTVCHPLP
Trigger: TGGGAGGGGATGGCAGACAGTCAAGGAGATGAGCGTCCTAAGGCATGTTGGGATAGGGTCAGATGCACCACCCATGGAGAGGTTTGTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350997.12
3UTR TCA 90 bp GGTTCCAGGATCCTTCAGAGCCAAAAGACCCCAATACCACAGTCTTaGCCTTTGCCCTGCCTGCTTCTGAAACTGGAGAATGGCATCTCC +
Preference number: 1 (lower is better)
Translates to: GSRILQSQKTPIPQS*PLPCLLLKLENGIS
Trigger: GGAGATGCCATTCTCCAGTTTCAGAAGCAGGCAGGGCAAAGGTCAAGACTGTGGTATTGGGGTCTTTTGGCTCTGAAGGATCCTGGAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350997.12
3UTR GCA 90 bp CTTTTGTCACTGTGTGTCCCTTTGTGGCCATGTAAGAGACCACACTaGTGTAGGCTGAGAAGGCCACAGTGGTTCAGGTGCTTTGAGGAC +
Preference number: 1 (lower is better)
Translates to: LLSLCVPLWPCKRPH*CRLRRPQWFRCFED
Trigger: GTCCTCAAAGCACCTGAACCACTGTGGCCTTCTCAGCCTACAGCAGTGTGGTCTCTTACATGGCCACAAAGGGACACACAGTGACAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350997.12
3UTR GCA 90 bp CTACCTGCATGTGCCAAACTAGAAAAAGGAAATAATTTACACCCCTaGCCCAACAGCTCCTTCCCTCCTAGGGACTTCTGTGTCCACCCC +
Preference number: 1 (lower is better)
Translates to: LPACAKLEKGNNLHP*PNSSFPPRDFCVHP
Trigger: GGGGTGGACACAGAAGTCCCTAGGAGGGAAGGAGCTGTTGGGGCAGGGGTGTAAATTATTTCCTTTTTCTAGTTTGGCACATGCAGGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000536991.5
3UTR CCA 90 bp TCACTGGTGTTTGCTCAGATTGGGCAGCCTATGCCCAAAGCTACTTaGCTAAACAGGCTGGTGACACCACACCCAAAAGGTGGCAAAGAA +
Preference number: 1 (lower is better)
Translates to: SLVFAQIGQPMPKAT*LNRLVTPHPKGGKE
Trigger: TTCTTTGCCACCTTTTGGGTGTGGTGTCACCAGCCTGTTTAGCCAAGTAGCTTTGGGCATAGGCTGCCCAATCTGAGCAAACACCAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350997.12
3UTR TCA 90 bp TGCTGTTATAATTCTTGCTCATCAGGTTCAACTGCCTTATCCCTCTaGGGTTTGCAAATGAGGATGGAGAAGCCACTGAGAAATGGACCA +
Preference number: 1 (lower is better)
Translates to: CCYNSCSSGSTALSL*GLQMRMEKPLRNGP
Trigger: TGGTCCATTTCTCAGTGGCTTCTCCATCCTCATTTGCAAACCTCAGAGGGATAAGGCAGTTGAACCTGATGAGCAAGAATTATAACAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350997.12
3UTR-3UTR TCA 90 bp GCTGGAAGTGCATGTGGTTCCACCAACTGGCGGGGGCCCCCTTCAGGTGGCCAATCCACTTTGAGGTGCTaGAGACCGACAGGTGCCCAA +
Preference number: 2 (lower is better)
Translates to: AGSACGSTNWRGPPSGGQSTLRC*RPTGAQ
Trigger: TTGGGCACCTGTCGGTCTTCAGCACCTCAAAGTGGA...TTGGCCACCTGAAGGGGGCCCCCGCCAGTTGGTGGAACCACATGCACTTCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000424501.5
3UTR-3UTR TCA 90 bp TGGAAGTGCATGTGGTTCCACCAACTGGCGGGGGCCCCCTTCAGGTGGCCAATCCAGATGGTTCCACTTTaGGGTGCTGAAGACCGACAG +
Preference number: 2 (lower is better)
Translates to: WKCMWFHQLAGAPFRWPIQMVPL*GAEDRQ
Trigger: CTGTCGGTCTTCAGCACCTCAAAGTGGAACCATCTG...GATTGGCCACCTGAAGGGGGCCCCCGCCAGTTGGTGGAACCACATGCACTTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000424501.5
3UTR-3UTR GCA 90 bp AGTGCATGTGGTTCCACCAACTGGCGGGGGCCCCCTTCAGGTGGCCAATCACAACTGAAGACCGACAGGTaGCCAAAGTCATGCTGCAGC +
Preference number: 2 (lower is better)
Translates to: SACGSTNWRGPPSGGQSQLKTDR*PKSCCS
Trigger: GCTGCAGCATGACTTTGGGCACCTGTCGGTCTTCAG...TTGTGATTGGCCACCTGAAGGGGGCCCCCGCCAGTTGGTGGAACCACATGCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000424501.5
3UTR-3UTR GCA 90 bp ATGCCCAAAGCTACTTGGCTAAACAGGCTGGTGACACCACACCCAAAAGGTGGCCCTCAAGCTCCCCTCTaGCTTGGCTCCAGAGTCTTC +
Preference number: 2 (lower is better)
Translates to: MPKATWLNRLVTPHPKGGPQAPL*LGSRVF
Trigger: GAAGACTCTGGAGCCAAGGCAGAGGGGAGCTTGAGG...GCCACCTTTTGGGTGTGGTGTCACCAGCCTGTTTAGCCAAGTAGCTTTGGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350997.12
3UTR-3UTR GCA 90 bp AATAATTTACACCCCTGCCCCAACAGCTCCTTCCCTCCTAGGGACTTCTGTGTCCCTCAAGCTCCCCTCTaGCTTGGCTCCAGAGTCTTC +
Preference number: 2 (lower is better)
Translates to: NNLHPCPNSSFPPRDFCVPQAPL*LGSRVF
Trigger: GAAGACTCTGGAGCCAAGGCAGAGGGGAGCTTGAGG...GACACAGAAGTCCCTAGGAGGGAAGGAGCTGTTGGGGCAGGGGTGTAAATTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000536991.5
3UTR-3UTR GCA 90 bp CAAGGCAAAGAAGAAGGGATGCATGTTGATGTCTGGGTCTTTGCGGAAGCAGTTTGCCCAAAGTCATGCTaGAGCCAGCCAGCCTGGGCC +
Preference number: 2 (lower is better)
Translates to: QGKEEGMHVDVWVFAEAVCPKSC*SQPAWA
Trigger: GGCCCAGGCTGGCTGGCTGCAGCATGACTTTGGGCA...AACTGCTTCCGCAAAGACCCAGACATCAACATGCATCCCTTCTTCTTTGCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424501.5
3UTR-3UTR CCA 90 bp CCTCTTCTGTTACCCTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAAGCTCCCCTCTGCCTTaGCTCCAGAGTCTTCCTCCT +
Preference number: 2 (lower is better)
Translates to: PLLLPSWFSLFTNYLHVPSSPLP*LQSLPP
Trigger: AGGAGGAAGACTCTGGAGCCAAGGCAGAGGGGAGCT...TGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAGGGTAACAGAAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000536991.5
3UTR-3UTR CCA 90 bp CTCCTCTTCTGTTACCCTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCAGCTCCCCTCTGCCTTaGCTCCAGAGTCTTCCTCCT +
Preference number: 2 (lower is better)
Translates to: LLFCYPPGSLCSPTTCMCSSPLP*LQSLPP
Trigger: AGGAGGAAGACTCTGGAGCCAAGGCAGAGGGGAGCT...GCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAGGGTAACAGAAGAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000536991.5
3UTR-3UTR TCA 90 bp CTGTGTGTCCCTTTGTGGCCATGTAAGAGACCACACTGCTGTAGGCTGAGAAGGCCAATACCACAGTCTTaGCCTTTGCCCTGCCTGCTT +
Preference number: 2 (lower is better)
Translates to: LCVPLWPCKRPHCCRLRRPIPQS*PLPCLL
Trigger: AAGCAGGCAGGGCAAAGGTCAAGACTGTGGTATTGG...CCTTCTCAGCCTACAGCAGTGTGGTCTCTTACATGGCCACAAAGGGACACACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350997.12
3UTR CAA 90 bp CTCACTGGTGTTTGCTCAGATTGGGCAGCCTATGCCCAAAGCTACTaGGCTAAACAGGCTGGTGACACCACACCCAAAAGGTGGCAAAGA +
Preference number: 2 (lower is better)
Translates to: LTGVCSDWAAYAQSY*AKQAGDTTPKRWQR
Trigger: TCTTTGCCACCTTTTGGGTGTGGTGTCACCAGCCTGTTTAGCCAAGTAGCTTTGGGCATAGGCTGCCCAATCTGAGCAAACACCAGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350997.12
3UTR CAA 90 bp TGGTTCCAGGATCCTTCAGAGCCAAAAGACCCCAATACCACAGTCTaGACCTTTGCCCTGCCTGCTTCTGAAACTGGAGAATGGCATCTC +
Preference number: 2 (lower is better)
Translates to: WFQDPSEPKDPNTTV*TFALPASETGEWHL
Trigger: GAGATGCCATTCTCCAGTTTCAGAAGCAGGCAGGGCAAAGGTCAAGACTGTGGTATTGGGGTCTTTTGGCTCTGAAGGATCCTGGAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350997.12
3UTR-3UTR TCA 90 bp CTGTGTGTCCCTTTGTGGCCATGTAAGAGACCACACTGCTGTAGGCTGAGAAGGACTGCCTTATCCCTCTaGGGTTTGCAAATGAGGATG +
Preference number: 2 (lower is better)
Translates to: LCVPLWPCKRPHCCRLRRTALSL*GLQMRM
Trigger: CATCCTCATTTGCAAACCTCAGAGGGATAAGGCAGT...CCTTCTCAGCCTACAGCAGTGTGGTCTCTTACATGGCCACAAAGGGACACACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350997.12
3UTR-3UTR GCA 90 bp GAGTTTGAGTCAGAGGCTTTATGTCCCCAAACCCAACCCCCTCTGAGTATTAAACCTCAAGCTCCCCTCTaGCTTGGCTCCAGAGTCTTC +
Preference number: 2 (lower is better)
Translates to: EFESEALCPQTQPPLSIKPQAPL*LGSRVF
Trigger: GAAGACTCTGGAGCCAAGGCAGAGGGGAGCTTGAGG...TTTAATACTCAGAGGGGGTTGGGTTTGGGGACATAAAGCCTCTGACTCAAACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000460649.5
ENST00000536991.5
3UTR-3UTR GCA 90 bp CTGTGTGTCCCTTTGTGGCCATGTAAGAGACCACACTGCTGTAGGCTGAGAAGGCTCATCAGGTTCAACTaGCTTATCCCTCTGAGGTTT +
Preference number: 2 (lower is better)
Translates to: LCVPLWPCKRPHCCRLRRLIRFN*LIPLRF
Trigger: AAACCTCAGAGGGATAAGGCAGTTGAACCTGATGAG...CCTTCTCAGCCTACAGCAGTGTGGTCTCTTACATGGCCACAAAGGGACACACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350997.12
3UTR-3UTR GCA 90 bp GTGTTTGCTCAGATTGGGCAGCCTATGCCCAAAGCTACTTGGCTAAACAGGCTGACAGGCATGAGCCACTaGATCCAGCTTGCTTCTAAT +
Preference number: 2 (lower is better)
Translates to: VFAQIGQPMPKATWLNRLTGMSH*IQLASN
Trigger: ATTAGAAGCAAGCTGGATGCAGTGGCTCATGCCTGT...CAGCCTGTTTAGCCAAGTAGCTTTGGGCATAGGCTGCCCAATCTGAGCAAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350997.12
3UTR-3UTR GCA 90 bp CAAGGCAAAGAAGAAGGGATGCATGTTGATGTCTGGGTCTTTGCGGAAGCAGTTGCATGGTGCTGGAAGTaGATGTGGTTCCACCAACTG +
Preference number: 2 (lower is better)
Translates to: QGKEEGMHVDVWVFAEAVAWCWK*MWFHQL
Trigger: CAGTTGGTGGAACCACATGCACTTCCAGCACCATGC...AACTGCTTCCGCAAAGACCCAGACATCAACATGCATCCCTTCTTCTTTGCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424501.5
3UTR-3UTR CCA 90 bp GGCATGAGTGGAATTTTAGTGTTAAATCTCTTCCTGACTCTGGGTTCAGTAGGTAGCTCCCCTCTGCCTTaGCTCCAGAGTCTTCCTCCT +
Preference number: 2 (lower is better)
Translates to: GMSGILVLNLFLTLGSVGSSPLP*LQSLPP
Trigger: AGGAGGAAGACTCTGGAGCCAAGGCAGAGGGGAGCT...ACCTACTGAACCCAGAGTCAGGAAGAGATTTAACACTAAAATTCCACTCATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000536991.5
3UTR CAA 90 bp TTTTACCATTGTAACATTCCGAGCCTTTTGTCACTGTGTGTCCCTTaGTGGCCATGTAAGAGACCACACTGCTGTAGGCTGAGAAGGCCA +
Preference number: 2 (lower is better)
Translates to: FYHCNIPSLLSLCVP*WPCKRPHCCRLRRP
Trigger: TGGCCTTCTCAGCCTACAGCAGTGTGGTCTCTTACATGGCCACAAAGGGACACACAGTGACAAAAGGCTCGGAATGTTACAATGGTAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350997.12
3UTR-3UTR GCA 90 bp GCTTTGAGGACTTGGTCTTGGCTCAATAGAGCCTCACTGGTGTTTGCTCAGATTAATAATTTACACCCCTaGCCCAACAGCTCCTTCCCT +
Preference number: 2 (lower is better)
Translates to: ALRTWSWLNRASLVFAQINNLHP*PNSSFP
Trigger: AGGGAAGGAGCTGTTGGGGCAGGGGTGTAAATTATT...AATCTGAGCAAACACCAGTGAGGCTCTATTGAGCCAAGACCAAGTCCTCAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350997.12
3UTR-3UTR GCA 90 bp TCTGTTACCCTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAAACTAAATAATTTACACCCCTaGCCCAACAGCTCCTTCCCT +
Preference number: 2 (lower is better)
Translates to: SVTLLVLSVHQLPACAKLNNLHP*PNSSFP
Trigger: AGGGAAGGAGCTGTTGGGGCAGGGGTGTAAATTATT...TAGTTTGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAGGGTAACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000536991.5
3UTR-3UTR CCA 90 bp AATAATTTACACCCCTGCCCCAACAGCTCCTTCCCTCCTAGGGACTTCTGTGTCTGGGTCTTAGAACTGTaGCTAGAAGATAAAAGGGAG +
Preference number: 2 (lower is better)
Translates to: NNLHPCPNSSFPPRDFCVWVLEL*LEDKRE
Trigger: CTCCCTTTTATCTTCTAGCCACAGTTCTAAGACCCA...GACACAGAAGTCCCTAGGAGGGAAGGAGCTGTTGGGGCAGGGGTGTAAATTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000536991.5
3UTR-3UTR CCA 90 bp ATAGGAAGGATCAGCACCTATTTTGGAGTGAGGAAGCCAATGGAGGTACAACTCGAAGCCACTGAGAAATaGACCAGTGAGCTGAGCTCA +
Preference number: 2 (lower is better)
Translates to: IGRISTYFGVRKPMEVQLEATEK*TSELSS
Trigger: TGAGCTCAGCTCACTGGTCCATTTCTCAGTGGCTTC...GAGTTGTACCTCCATTGGCTTCCTCACTCCAAAATAGGTGCTGATCCTTCCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350997.12
3UTR-3UTR CCA 90 bp GCTTTGAGGACTTGGTCTTGGCTCAATAGAGCCTCACTGGTGTTTGCTCAGATTGCAAAGGGAAACCACTaGGCATCCCCTTTGTTTCTA +
Preference number: 2 (lower is better)
Translates to: ALRTWSWLNRASLVFAQIAKGNH*ASPLFL
Trigger: TAGAAACAAAGGGGATGCCCAGTGGTTTCCCTTTGC...AATCTGAGCAAACACCAGTGAGGCTCTATTGAGCCAAGACCAAGTCCTCAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350997.12
3UTR-3UTR TCA 90 bp TCTGTTACCCTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAAACTAAAACCCAACCCCCTCTaGGTATTAAACTATAGTGGC +
Preference number: 2 (lower is better)
Translates to: SVTLLVLSVHQLPACAKLKPNPL*VLNYSG
Trigger: GCCACTATAGTTTAATACTCAGAGGGGGTTGGGTTT...TAGTTTGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAGGGTAACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000536991.5
3UTR-3UTR TCA 90 bp ATAGGAAGGATCAGCACCTATTTTGGAGTGAGGAAGCCAATGGAGGTACAACTCTCCATGTCTTTGTGTTaGCAAACCTCTCCATGGGTG +
Preference number: 2 (lower is better)
Translates to: IGRISTYFGVRKPMEVQLSMSLC*QTSPWV
Trigger: CACCCATGGAGAGGTTTGTCAACACAAAGACATGGA...GAGTTGTACCTCCATTGGCTTCCTCACTCCAAAATAGGTGCTGATCCTTCCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350997.12
3UTR-3UTR GCA 90 bp GGAATTCATGCTGCCATGATCTACTTGACCAGAGGCAGCTTTTCCTCTCTAAGCCTAACTTGTCCCATCTaGTCACTTGCTTATGGAGCT +
Preference number: 2 (lower is better)
Translates to: GIHAAMIYLTRGSFSSLSLTCPI*SLAYGA
Trigger: AGCTCCATAAGCAAGTGAGCAGATGGGACAAGTTAG...GCTTAGAGAGGAAAAGCTGCCTCTGGTCAAGTAGATCATGGCAGCATGAATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350997.12
3UTR-3UTR TCA 90 bp GCCCGGCATGAGTGGAATTTTAGTGTTAAATCTCTTCCTGACTCTGGGTTCAGTAAACCCAACCCCCTCTaGGTATTAAACTATAGTGGC +
Preference number: 2 (lower is better)
Translates to: ARHEWNFSVKSLPDSGFSKPNPL*VLNYSG
Trigger: GCCACTATAGTTTAATACTCAGAGGGGGTTGGGTTT...ACTGAACCCAGAGTCAGGAAGAGATTTAACACTAAAATTCCACTCATGCCGGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000536991.5
3UTR-3UTR TCA 90 bp CTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAAACTAGAAAAAGGAAAACCCAACCCCCTCTaGGTATTAAACTATAGTGGC +
Preference number: 2 (lower is better)
Translates to: LLVLSVHQLPACAKLEKGKPNPL*VLNYSG
Trigger: GCCACTATAGTTTAATACTCAGAGGGGGTTGGGTTT...TCCTTTTTCTAGTTTGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000536991.5
3UTR-3UTR GCA 90 bp GCTTTGAGGACTTGGTCTTGGCTCAATAGAGCCTCACTGGTGTTTGCTCAGATTTGTTCACCAACTACCTaGATGTGCCAAACTAGAAAA +
Preference number: 2 (lower is better)
Translates to: ALRTWSWLNRASLVFAQICSPTT*MCQTRK
Trigger: TTTTCTAGTTTGGCACATGCAGGTAGTTGGTGAACA...AATCTGAGCAAACACCAGTGAGGCTCTATTGAGCCAAGACCAAGTCCTCAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350997.12
3UTR-3UTR CCA 90 bp CATGAGTGGAATTTTAGTGTTAAATCTCTTCCTGACTCTGGGTTCAGTAGGTCCCTTCTGTTACCCTCCTaGTTCTCTCTGTTCACCAAC +
Preference number: 2 (lower is better)
Translates to: HEWNFSVKSLPDSGFSRSLLLPS*FSLFTN
Trigger: GTTGGTGAACAGAGAGAACCAGGAGGGTAACAGAAG...GGACCTACTGAACCCAGAGTCAGGAAGAGATTTAACACTAAAATTCCACTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000536991.5
3UTR-3UTR CCA 90 bp GGAATTCATGCTGCCATGATCTACTTGACCAGAGGCAGCTTTTCCTCTCTAAGCATAAACCAAAATCAGTaGTTCCAGGATCCTTCAGAG +
Preference number: 2 (lower is better)
Translates to: GIHAAMIYLTRGSFSSLSINQNQ*FQDPSE
Trigger: CTCTGAAGGATCCTGGAACCACTGATTTTGGTTTAT...GCTTAGAGAGGAAAAGCTGCCTCTGGTCAAGTAGATCATGGCAGCATGAATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350997.12
3UTR-3UTR CCA 90 bp TTTGGAGTGAGGAAGCCAATGGAGGTACAACTCCTCAATTCTAAGTTTTTGTTGAGTAATCCTGCCACCTaGAAGCAAAGGCTGTGGGTT +
Preference number: 2 (lower is better)
Translates to: FGVRKPMEVQLLNSKFLLSNPAT*KQRLWV
Trigger: AACCCACAGCCTTTGCTTCCAGGTGGCAGGATTACT...CAACAAAAACTTAGAATTGAGGAGTTGTACCTCCATTGGCTTCCTCACTCCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000350997.12
3UTR-3UTR GCA 90 bp GCCCGGCATGAGTGGAATTTTAGTGTTAAATCTCTTCCTGACTCTGGGTTCAGTTGTTCACCAACTACCTaGATGTGCCAAACTAGAAAA +
Preference number: 2 (lower is better)
Translates to: ARHEWNFSVKSLPDSGFSCSPTT*MCQTRK
Trigger: TTTTCTAGTTTGGCACATGCAGGTAGTTGGTGAACA...ACTGAACCCAGAGTCAGGAAGAGATTTAACACTAAAATTCCACTCATGCCGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000536991.5
3UTR-3UTR TCA 90 bp ACCCAGGCTGTTTTAAACCTAGTTCTCCAGCTAAGTAAAATGTGCCCAAATGGACCCTTACATTCTTTATaGCCGAAATCTGTGTCTTTC +
Preference number: 2 (lower is better)
Translates to: TQAVLNLVLQLSKMCPNGPLHSL*PKSVSF
Trigger: GAAAGACACAGATTTCGGTCATAAAGAATGTAAGGG...TCCATTTGGGCACATTTTACTTAGCTGGAGAACTAGGTTTAAAACAGCCTGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350997.12
3UTR-3UTR CCA 90 bp GTTAGATACTTGAACAAGAGTGGACAGAGTAAGATACCTAGCTACAGCAATAGAAATTATCTCCCAATTTaGTCACTTCTGCTAATTGCT +
Preference number: 2 (lower is better)
Translates to: VRYLNKSGQSKIPSYSNRNYLPI*SLLLIA
Trigger: AGCAATTAGCAGAAGTGACCAAATTGGGAGATAATT...TCTATTGCTGTAGCTAGGTATCTTACTCTGTCCACTCTTGTTCAAGTATCTAAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350997.12
3UTR-3UTR CAA 90 bp AATAATTTACACCCCTGCCCCAACAGCTCCTTCCCTCCTAGGGACTTCTGTGTCAAGCTCCCCTCTGCCTaGGCTCCAGAGTCTTCCTCC +
Preference number: 3 (lower is better)
Translates to: NNLHPCPNSSFPPRDFCVKLPSA*APESSS
Trigger: GGAGGAAGACTCTGGAGCCAAGGCAGAGGGGAGCTT...GACACAGAAGTCCCTAGGAGGGAAGGAGCTGTTGGGGCAGGGGTGTAAATTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000536991.5
3UTR GCA 72 bp CTCTCCATGGGTGGTGCATCTGACCCTATCCCAACATaGCTTAGGACGCTCATCTCCTTGACTGTCTGCCAT +
Preference number: 3 (lower is better)
Translates to: LSMGGASDPIPT*LRTLISLTVCH
Trigger: ATGGCAGACAGTCAAGGAGATGAGCGTCCTAAGGCATGTTGGGATAGGGTCAGATGCACCACCCATGGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350997.12
3UTR TCA 72 bp CAATACCACAGTCTTGACCTTTGCCCTGCCTGCTTCTaGAACTGGAGAATGGCATCTCCCAGCAGCCTAAGG +
Preference number: 3 (lower is better)
Translates to: QYHSLDLCPACF*NWRMASPSSLR
Trigger: CCTTAGGCTGCTGGGAGATGCCATTCTCCAGTTTCAGAAGCAGGCAGGGCAAAGGTCAAGACTGTGGTATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350997.12
3UTR-3UTR CAA 90 bp CTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAAACTAGAAAAAGGAAAGCTCCCCTCTGCCTaGGCTCCAGAGTCTTCCTCC +
Preference number: 3 (lower is better)
Translates to: LLVLSVHQLPACAKLEKGKLPSA*APESSS
Trigger: GGAGGAAGACTCTGGAGCCAAGGCAGAGGGGAGCTT...TCCTTTTTCTAGTTTGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000536991.5
3UTR CCA 72 bp GGCCACAGTGGTTCAGGTGCTTTGAGGACTTGGTCTTaGCTCAATAGAGCCTCACTGGTGTTTGCTCAGATT +
Preference number: 3 (lower is better)
Translates to: GHSGSGALRTWS*LNRASLVFAQI
Trigger: AATCTGAGCAAACACCAGTGAGGCTCTATTGAGCCAAGACCAAGTCCTCAAAGCACCTGAACCACTGTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350997.12
3UTR-3UTR CAA 90 bp CATGAGTGGAATTTTAGTGTTAAATCTCTTCCTGACTCTGGGTTCAGTAGGTCCAAGCTCCCCTCTGCCTaGGCTCCAGAGTCTTCCTCC +
Preference number: 3 (lower is better)
Translates to: HEWNFSVKSLPDSGFSRSKLPSA*APESSS
Trigger: GGAGGAAGACTCTGGAGCCAAGGCAGAGGGGAGCTT...GGACCTACTGAACCCAGAGTCAGGAAGAGATTTAACACTAAAATTCCACTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000536991.5
3UTR CCA 72 bp AACATTCCGAGCCTTTTGTCACTGTGTGTCCCTTTGTaGCCATGTAAGAGACCACACTGCTGTAGGCTGAGA +
Preference number: 3 (lower is better)
Translates to: NIPSLLSLCVPL*PCKRPHCCRLR
Trigger: TCTCAGCCTACAGCAGTGTGGTCTCTTACATGGCCACAAAGGGACACACAGTGACAAAAGGCTCGGAATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350997.12
3UTR-3UTR CAA 90 bp ATAATTTACACCCCTGCCCCAACAGCTCCTTCCCTCCTAGGGACTTCTGTGTCCATAAAAGGGAGGAGTTaGAGTCAGAGGCTTTATGTC +
Preference number: 3 (lower is better)
Translates to: IIYTPAPTAPSLLGTSVSIKGRS*SQRLYV
Trigger: GACATAAAGCCTCTGACTCAAACTCCTCCCTTTTAT...GGACACAGAAGTCCCTAGGAGGGAAGGAGCTGTTGGGGCAGGGGTGTAAATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000536991.5
3UTR TCA 72 bp ATCCTTCAGAGCCAAAAGACCCCAATACCACAGTCTTaGCCTTTGCCCTGCCTGCTTCTGAAACTGGAGAAT +
Preference number: 3 (lower is better)
Translates to: ILQSQKTPIPQS*PLPCLLLKLEN
Trigger: ATTCTCCAGTTTCAGAAGCAGGCAGGGCAAAGGTCAAGACTGTGGTATTGGGGTCTTTTGGCTCTGAAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350997.12
3UTR-3UTR CAA 90 bp GTGTTTGCTCAGATTGGGCAGCCTATGCCCAAAGCTACTTGGCTAAACAGGCTGATAAAAGGGAGGAGTTaGAGTCAGAGGCTTTATGTC +
Preference number: 3 (lower is better)
Translates to: VFAQIGQPMPKATWLNRLIKGRS*SQRLYV
Trigger: GACATAAAGCCTCTGACTCAAACTCCTCCCTTTTAT...CAGCCTGTTTAGCCAAGTAGCTTTGGGCATAGGCTGCCCAATCTGAGCAAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350997.12
3UTR-3UTR CAA 90 bp GCTTTGAGGACTTGGTCTTGGCTCAATAGAGCCTCACTGGTGTTTGCTCAGATTGTCATATTCCTATGTTaGCTCTCTGGAGAGATGGGC +
Preference number: 3 (lower is better)
Translates to: ALRTWSWLNRASLVFAQIVIFLC*LSGEMG
Trigger: GCCCATCTCTCCAGAGAGCAAACATAGGAATATGAC...AATCTGAGCAAACACCAGTGAGGCTCTATTGAGCCAAGACCAAGTCCTCAAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350997.12
3UTR-3UTR CAA 90 bp GGAATTCATGCTGCCATGATCTACTTGACCAGAGGCAGCTTTTCCTCTCTAAGCAACATTCCGAGCCTTTaGTCACTGTGTGTCCCTTTG +
Preference number: 3 (lower is better)
Translates to: GIHAAMIYLTRGSFSSLSNIPSL*SLCVPL
Trigger: CAAAGGGACACACAGTGACAAAAGGCTCGGAATGTT...GCTTAGAGAGGAAAAGCTGCCTCTGGTCAAGTAGATCATGGCAGCATGAATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350997.12
3UTR TCA 72 bp AGTCAGAGGCTTTATGTCCCCAAACCCAACCCCCTCTaGGTATTAAACTATAGTGGCATTGTCCCTCAAGCT +
Preference number: 3 (lower is better)
Translates to: SQRLYVPKPNPL*VLNYSGIVPQA
Trigger: AGCTTGAGGGACAATGCCACTATAGTTTAATACTCAGAGGGGGTTGGGTTTGGGGACATAAAGCCTCTGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000460649.5
ENST00000536991.5
3UTR TCA 72 bp TACATTCTTTATGACCGAAATCTGTGTCTTTCCTCATaGCTGATAATTATCTCCCAATTTGGTCACTTCTGC +
Preference number: 3 (lower is better)
Translates to: YILYDRNLCLSS*LIIISQFGHFC
Trigger: GCAGAAGTGACCAAATTGGGAGATAATTATCAGTCATGAGGAAAGACACAGATTTCGGTCATAAAGAATGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350997.12
3UTR TCA 72 bp TCCTCTCTAAGCCTATTTTATATCTGTCAGTGGATTTaGGATCACTCATTTTACCATTGTAACATTCCGAGC +
Preference number: 3 (lower is better)
Translates to: SSLSLFYICQWI*DHSFYHCNIPS
Trigger: GCTCGGAATGTTACAATGGTAAAATGAGTGATCTCAAATCCACTGACAGATATAAAATAGGCTTAGAGAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR TCA 90 bp TGGAAGTGCATGTGGTTCCACCAACTGGCGGGGGCCCCCTTCAGGTGGCCAATCCCGCTCCTCGCACCCTaGGCGCTGGGCCACCTCGTC +
Preference number: 4 (lower is better)
Translates to: WKCMWFHQLAGAPFRWPIPLLAP*ALGHLV
Trigger: GACGAGGTGGCCCAGCGCTCAGGGTGCGAGGAGCGG...GATTGGCCACCTGAAGGGGGCCCCCGCCAGTTGGTGGAACCACATGCACTTCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000424501.5
CDS-3UTR GCA 90 bp AGTGCATGTGGTTCCACCAACTGGCGGGGGCCCCCTTCAGGTGGCCAATCACAACGGGAGCCCCCTGGATaGCGGCGGGTGAACTCGCTG +
Preference number: 4 (lower is better)
Translates to: SACGSTNWRGPPSGGQSQREPPG*RRVNSL
Trigger: CAGCGAGTTCACCCGCCGGCATCCAGGGGGCTCCCG...TTGTGATTGGCCACCTGAAGGGGGCCCCCGCCAGTTGGTGGAACCACATGCACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000424501.5
CDS-3UTR CCA 90 bp CTGGAAGTGCATGTGGTTCCACCAACTGGCGGGGGCCCCCTTCAGGTGGCCAATTCGCACCCTGAGCGCTaGGCCACCTCGTCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: LEVHVVPPTGGGPLQVANSHPER*ATSSQV
Trigger: CACCTGGGACGAGGTGGCCCAGCGCTCAGGGTGCGA...ATTGGCCACCTGAAGGGGGCCCCCGCCAGTTGGTGGAACCACATGCACTTCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000424501.5
CDS-3UTR TCA 90 bp GCTGGAAGTGCATGTGGTTCCACCAACTGGCGGGGGCCCCCTTCAGGTGGCCAACATGGTTGGCCTTCATaGGCCCCATCCGCTCCACTG +
Preference number: 4 (lower is better)
Translates to: AGSACGSTNWRGPPSGGQHGWPS*APSAPL
Trigger: CAGTGGAGCGGATGGGGCTCATGAAGGCCAACCATG...TTGGCCACCTGAAGGGGGCCCCCGCCAGTTGGTGGAACCACATGCACTTCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000424501.5
CDS-3UTR GCA 90 bp CTGGAAGTGCATGTGGTTCCACCAACTGGCGGGGGCCCCCTTCAGGTGGCCAATTGCCCAAAGTCATGCTaGAGCCAGCCAGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LEVHVVPPTGGGPLQVANCPKSC*SQPAWA
Trigger: GGCCCAGGCTGGCTGGCTGCAGCATGACTTTGGGCA...ATTGGCCACCTGAAGGGGGCCCCCGCCAGTTGGTGGAACCACATGCACTTCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000424501.5
CDS-3UTR CCA 90 bp GCTGGAAGTGCATGTGGTTCCACCAACTGGCGGGGGCCCCCTTCAGGTGGCCAACCACAAAGGGATCCGTaGCATCCTGCCCGGCGTAGT +
Preference number: 4 (lower is better)
Translates to: AGSACGSTNWRGPPSGGQPQRDP*HPARRS
Trigger: ACTACGCCGGGCAGGATGCCACGGATCCCTTTGTGG...TTGGCCACCTGAAGGGGGCCCCCGCCAGTTGGTGGAACCACATGCACTTCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000424501.5
CDS-3UTR CCA 90 bp GCTGGAAGTGCATGTGGTTCCACCAACTGGCGGGGGCCCCCTTCAGGTGGCCAATGCAGCCAGCCAGCCTaGGCCTCAAATGATCTGCCC +
Preference number: 4 (lower is better)
Translates to: AGSACGSTNWRGPPSGGQCSQPA*ASNDLP
Trigger: GGGCAGATCATTTGAGGCCCAGGCTGGCTGGCTGCA...TTGGCCACCTGAAGGGGGCCCCCGCCAGTTGGTGGAACCACATGCACTTCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000424501.5
CDS-3UTR GCA 90 bp GTGCTGGAAGTGCATGTGGTTCCACCAACTGGCGGGGGCCCCCTTCAGGTGGCCCCCAAAGTGCTGAACTaGACTGAGCAGCACCGCACA +
Preference number: 4 (lower is better)
Translates to: VLEVHVVPPTGGGPLQVAPKVLN*TEQHRT
Trigger: TGTGCGGTGCTGCTCAGTGCAGTTCAGCACTTTGGG...GGCCACCTGAAGGGGGCCCCCGCCAGTTGGTGGAACCACATGCACTTCCAGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000424501.5
CDS-3UTR TCA 90 bp TGGAAGTGCATGTGGTTCCACCAACTGGCGGGGGCCCCCTTCAGGTGGCCAATCAGTGCTGAACTGCACTaGGCAGCACCGCACAGAGGA +
Preference number: 4 (lower is better)
Translates to: WKCMWFHQLAGAPFRWPISAELH*AAPHRG
Trigger: TCCTCTGTGCGGTGCTGCTCAGTGCAGTTCAGCACT...GATTGGCCACCTGAAGGGGGCCCCCGCCAGTTGGTGGAACCACATGCACTTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000424501.5
CDS-3UTR TCA 90 bp AGTGCATGTGGTTCCACCAACTGGCGGGGGCCCCCTTCAGGTGGCCAATCACAAGGCCTCCCAAAGTGCTaGACTGCACTGAGCAGCACC +
Preference number: 4 (lower is better)
Translates to: SACGSTNWRGPPSGGQSQGLPKC*TALSST
Trigger: GGTGCTGCTCAGTGCAGTTCAGCACTTTGGGAGGCC...TTGTGATTGGCCACCTGAAGGGGGCCCCCGCCAGTTGGTGGAACCACATGCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000424501.5
CDS-3UTR CCA 90 bp ATAATTTACACCCCTGCCCCAACAGCTCCTTCCCTCCTAGGGACTTCTGTGTCCCGCGGGCTCCAGGAGTaGATTTGCTGGCGCGCGCCC +
Preference number: 4 (lower is better)
Translates to: IIYTPAPTAPSLLGTSVSRGLQE*ICWRAP
Trigger: GGGCGCGCGCCAGCAAATCCACTCCTGGAGCCCGCG...GGACACAGAAGTCCCTAGGAGGGAAGGAGCTGTTGGGGCAGGGGTGTAAATTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CCA 90 bp TGGAAGTGCATGTGGTTCCACCAACTGGCGGGGGCCCCCTTCAGGTGGCCAATCTGCTGGAAGTGCATGTaGTTCCACCAACTGGCGGGG +
Preference number: 4 (lower is better)
Translates to: WKCMWFHQLAGAPFRWPICWKCM*FHQLAG
Trigger: CCCCGCCAGTTGGTGGAACCACATGCACTTCCAGCA...GATTGGCCACCTGAAGGGGGCCCCCGCCAGTTGGTGGAACCACATGCACTTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000424501.5
CDS-3UTR CCA 90 bp GCTGGAAGTGCATGTGGTTCCACCAACTGGCGGGGGCCCCCTTCAGGTGGCCAAGGCCTCCCAAGGTACTaGTATTACAGGCGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: AGSACGSTNWRGPPSGGQGLPRY*YYRREP
Trigger: TGGCTCACGCCTGTAATACCAGTACCTTGGGAGGCC...TTGGCCACCTGAAGGGGGCCCCCGCCAGTTGGTGGAACCACATGCACTTCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000424501.5
CDS-3UTR TCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGACCGCTCCTCGCACCCTaGGCGCTGGGCCACCTCGTC +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRPLLAP*ALGHLV
Trigger: GACGAGGTGGCCCAGCGCTCAGGGTGCGAGGAGCGG...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR TCA 90 bp CTGGAAGTGCATGTGGTTCCACCAACTGGCGGGGGCCCCCTTCAGGTGGCCAATTCCACTTTGAGGTGCTaGAGACCGACAGGTGCCCAA +
Preference number: 4 (lower is better)
Translates to: LEVHVVPPTGGGPLQVANSTLRC*RPTGAQ
Trigger: TTGGGCACCTGTCGGTCTTCAGCACCTCAAAGTGGA...ATTGGCCACCTGAAGGGGGCCCCCGCCAGTTGGTGGAACCACATGCACTTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000424501.5
CDS-3UTR TCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGACCCGGGCCCTGTAAGTaGTGCGGCGTGTGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRPGPCK*CGVWGG
Trigger: CCCGCCCCACACGCCGCATCACTTACAGGGCCCGGG...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542506.5
CDS-3UTR GCA 90 bp CTGGAAGTGCATGTGGTTCCACCAACTGGCGGGGGCCCCCTTCAGGTGGCCAATCTGAAGACCGACAGGTaGCCAAAGTCATGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LEVHVVPPTGGGPLQVANLKTDR*PKSCCS
Trigger: GCTGCAGCATGACTTTGGGCACCTGTCGGTCTTCAG...ATTGGCCACCTGAAGGGGGCCCCCGCCAGTTGGTGGAACCACATGCACTTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000424501.5
CDS-3UTR GCA 90 bp TGGAAGTGCATGTGGTTCCACCAACTGGCGGGGGCCCCCTTCAGGTGGCCAATCGGGCCTCAAATGATCTaGCCATCTTGGCCTCCCAAG +
Preference number: 4 (lower is better)
Translates to: WKCMWFHQLAGAPFRWPIGPQMI*PSWPPK
Trigger: CTTGGGAGGCCAAGATGGGCAGATCATTTGAGGCCC...GATTGGCCACCTGAAGGGGGCCCCCGCCAGTTGGTGGAACCACATGCACTTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000424501.5
CDS-3UTR CCA 90 bp ATAATTTACACCCCTGCCCCAACAGCTCCTTCCCTCCTAGGGACTTCTGTGTCCTCGCACCCTGAGCGCTaGGCCACCTCGTCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: IIYTPAPTAPSLLGTSVSSHPER*ATSSQV
Trigger: CACCTGGGACGAGGTGGCCCAGCGCTCAGGGTGCGA...GGACACAGAAGTCCCTAGGAGGGAAGGAGCTGTTGGGGCAGGGGTGTAAATTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CCA 90 bp CTGGAAGTGCATGTGGTTCCACCAACTGGCGGGGGCCCCCTTCAGGTGGCCAATTGGTGGGCTCAAAGCTaGGCTGCTCTGGAGACAGTT +
Preference number: 4 (lower is better)
Translates to: LEVHVVPPTGGGPLQVANWWAQS*AALETV
Trigger: AACTGTCTCCAGAGCAGCCCAGCTTTGAGCCCACCA...ATTGGCCACCTGAAGGGGGCCCCCGCCAGTTGGTGGAACCACATGCACTTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000424501.5
CDS-3UTR CCA 90 bp TGGAAGTGCATGTGGTTCCACCAACTGGCGGGGGCCCCCTTCAGGTGGCCAATCGGCTTGGCATGGTGCTaGAAGTGCATGTGGTTCCAC +
Preference number: 4 (lower is better)
Translates to: WKCMWFHQLAGAPFRWPIGLAWC*KCMWFH
Trigger: GTGGAACCACATGCACTTCCAGCACCATGCCAAGCC...GATTGGCCACCTGAAGGGGGCCCCCGCCAGTTGGTGGAACCACATGCACTTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000424501.5
CDS-3UTR CCA 90 bp ATAATTTACACCCCTGCCCCAACAGCTCCTTCCCTCCTAGGGACTTCTGTGTCCCCTCTCCGCTCCTGCTaGCGAGTGGAGACCGGCACC +
Preference number: 4 (lower is better)
Translates to: IIYTPAPTAPSLLGTSVSPLRSC*RVETGT
Trigger: GGTGCCGGTCTCCACTCGCCAGCAGGAGCGGAGAGG...GGACACAGAAGTCCCTAGGAGGGAAGGAGCTGTTGGGGCAGGGGTGTAAATTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000433932.5
CDS-3UTR GCA 90 bp AGTGCATGTGGTTCCACCAACTGGCGGGGGCCCCCTTCAGGTGGCCAATCACAAAAGGGTGAGCCAGGCTaGACCATCCAGCAGCAAGAT +
Preference number: 4 (lower is better)
Translates to: SACGSTNWRGPPSGGQSQKGEPG*TIQQQD
Trigger: ATCTTGCTGCTGGATGGTGCAGCCTGGCTCACCCTT...TTGTGATTGGCCACCTGAAGGGGGCCCCCGCCAGTTGGTGGAACCACATGCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000424501.5
CDS-3UTR TCA 90 bp TGGAAGTGCATGTGGTTCCACCAACTGGCGGGGGCCCCCTTCAGGTGGCCAATCAGAAGGGATGCATGTTaGTGTCTGGGTCTTTGCGGA +
Preference number: 4 (lower is better)
Translates to: WKCMWFHQLAGAPFRWPIRRDAC*CLGLCG
Trigger: TCCGCAAAGACCCAGACATCAACATGCATCCCTTCT...GATTGGCCACCTGAAGGGGGCCCCCGCCAGTTGGTGGAACCACATGCACTTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000424501.5
CDS-3UTR GCA 90 bp GCTTTGAGGACTTGGTCTTGGCTCAATAGAGCCTCACTGGTGTTTGCTCAGATTCGGGAGCCCCCTGGATaGCGGCGGGTGAACTCGCTG +
Preference number: 4 (lower is better)
Translates to: ALRTWSWLNRASLVFAQIREPPG*RRVNSL
Trigger: CAGCGAGTTCACCCGCCGGCATCCAGGGGGCTCCCG...AATCTGAGCAAACACCAGTGAGGCTCTATTGAGCCAAGACCAAGTCCTCAAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR GCA 90 bp AGTGCATGTGGTTCCACCAACTGGCGGGGGCCCCCTTCAGGTGGCCAATCACAAGCATGGTGCTGGAAGTaGATGTGGTTCCACCAACTG +
Preference number: 4 (lower is better)
Translates to: SACGSTNWRGPPSGGQSQAWCWK*MWFHQL
Trigger: CAGTTGGTGGAACCACATGCACTTCCAGCACCATGC...TTGTGATTGGCCACCTGAAGGGGGCCCCCGCCAGTTGGTGGAACCACATGCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000424501.5
CDS-3UTR GCA 90 bp ATAATTTACACCCCTGCCCCAACAGCTCCTTCCCTCCTAGGGACTTCTGTGTCCAGGTCCAGACGCGGCTaGGCTGCCTCTCCTAGCCAT +
Preference number: 4 (lower is better)
Translates to: IIYTPAPTAPSLLGTSVSRSRRG*AASPSH
Trigger: ATGGCTAGGAGAGGCAGCGCAGCCGCGTCTGGACCT...GGACACAGAAGTCCCTAGGAGGGAAGGAGCTGTTGGGGCAGGGGTGTAAATTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433932.5
CDS-3UTR GCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGACTCCCTCTCCGCTCCTaGTGGCGAGTGGAGACCGGC +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRLPLRS*WRVETG
Trigger: GCCGGTCTCCACTCGCCAGCAGGAGCGGAGAGGGAG...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433932.5
CDS-3UTR CCA 90 bp CGTGCCACCACGCCCGGCATGAGTGGAATTTTAGTGTTAAATCTCTTCCTGACTATTGGCCGAGCCTCGTaGCGCGGGGAGCGAGATCCC +
Preference number: 4 (lower is better)
Translates to: RATTPGMSGILVLNLFLTIGRAS*RGERDP
Trigger: GGGATCTCGCTCCCCGCGCCACGAGGCTCGGCCAAT...AGTCAGGAAGAGATTTAACACTAAAATTCCACTCATGCCGGGCGTGGTGGCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CCA 90 bp CTGGAAGTGCATGTGGTTCCACCAACTGGCGGGGGCCCCCTTCAGGTGGCCAATGCTCTTTATTCTTGGTaGGCTCAAAGCTGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: LEVHVVPPTGGGPLQVANALYSW*AQSWAA
Trigger: AGCAGCCCAGCTTTGAGCCCACCAAGAATAAAGAGC...ATTGGCCACCTGAAGGGGGCCCCCGCCAGTTGGTGGAACCACATGCACTTCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000424501.5
CDS-3UTR TCA 90 bp ATAATTTACACCCCTGCCCCAACAGCTCCTTCCCTCCTAGGGACTTCTGTGTCCCATGGTTGGCCTTCATaGGCCCCATCCGCTCCACTG +
Preference number: 4 (lower is better)
Translates to: IIYTPAPTAPSLLGTSVSHGWPS*APSAPL
Trigger: CAGTGGAGCGGATGGGGCTCATGAAGGCCAACCATG...GGACACAGAAGTCCCTAGGAGGGAAGGAGCTGTTGGGGCAGGGGTGTAAATTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000433932.5
CDS-3UTR TCA 90 bp CTCCTCTTCTGTTACCCTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCGGGCCTGAACTGCACTaGGCAGCACCGCACAGAGGA +
Preference number: 4 (lower is better)
Translates to: LLFCYPPGSLCSPTTCMCGPELH*AAPHRG
Trigger: TCCTCTGTGCGGTGCTGCTCAGTGCAGTTCAGGCCC...GCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAGGGTAACAGAAGAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000433932.5
CDS-3UTR TCA 90 bp CTCCTCTTCTGTTACCCTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCGATGTCGGCGAAGGCTaGCAGCAGGGGCTTGGACTG +
Preference number: 4 (lower is better)
Translates to: LLFCYPPGSLCSPTTCMCDVGEG*QQGLGL
Trigger: CAGTCCAAGCCCCTGCTGTCAGCCTTCGCCGACATC...GCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAGGGTAACAGAAGAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000536991.5
CDS-3UTR GCA 90 bp GCTGGAAGTGCATGTGGTTCCACCAACTGGCGGGGGCCCCCTTCAGGTGGCCAAGCAAAGAAGAAGGGATaGATGTTGATGTCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: AGSACGSTNWRGPPSGGQAKKKG*MLMSGS
Trigger: AGACCCAGACATCAACATGCATCCCTTCTTCTTTGC...TTGGCCACCTGAAGGGGGCCCCCGCCAGTTGGTGGAACCACATGCACTTCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000424501.5
CDS-3UTR CCA 90 bp GTGTTTGCTCAGATTGGGCAGCCTATGCCCAAAGCTACTTGGCTAAACAGGCTGGATCCCGTCCCCCGGTaGGTCTTGGGCAACTCACAG +
Preference number: 4 (lower is better)
Translates to: VFAQIGQPMPKATWLNRLDPVPR*VLGNSQ
Trigger: CTGTGAGTTGCCCAAGACCCACCGGGGGACGGGATC...CAGCCTGTTTAGCCAAGTAGCTTTGGGCATAGGCTGCCCAATCTGAGCAAACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CCA 90 bp CTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAAACTAGAAAAAGGAAGCGCGCGTTCCCATTaGCCGAGCCTCGTGGCGCGG +
Preference number: 4 (lower is better)
Translates to: LLVLSVHQLPACAKLEKGSARSH*PSLVAR
Trigger: CCGCGCCACGAGGCTCGGCCAATGGGAACGCGCGCT...TCCTTTTTCTAGTTTGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CCA 90 bp CTGTGTGTCCCTTTGTGGCCATGTAAGAGACCACACTGCTGTAGGCTGAGAAGGCCACAAAGGGATCCGTaGCATCCTGCCCGGCGTAGT +
Preference number: 4 (lower is better)
Translates to: LCVPLWPCKRPHCCRLRRPQRDP*HPARRS
Trigger: ACTACGCCGGGCAGGATGCCACGGATCCCTTTGTGG...CCTTCTCAGCCTACAGCAGTGTGGTCTCTTACATGGCCACAAAGGGACACACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CCA 90 bp AGTGCATGTGGTTCCACCAACTGGCGGGGGCCCCCTTCAGGTGGCCAATCACAAAAAGCTGGGCTGCTCTaGAGACAGTTCTCCAATCAG +
Preference number: 4 (lower is better)
Translates to: SACGSTNWRGPPSGGQSQKAGLL*RQFSNQ
Trigger: CTGATTGGAGAACTGTCTCCAGAGCAGCCCAGCTTT...TTGTGATTGGCCACCTGAAGGGGGCCCCCGCCAGTTGGTGGAACCACATGCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000424501.5
CDS-3UTR CCA 90 bp AATAATTTACACCCCTGCCCCAACAGCTCCTTCCCTCCTAGGGACTTCTGTGTCTGTGGTTCCACCAACTaGCGGGGGCCCCCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: NNLHPCPNSSFPPRDFCVCGSTN*RGPPSG
Trigger: ACCTGAAGGGGGCCCCCGCCAGTTGGTGGAACCACA...GACACAGAAGTCCCTAGGAGGGAAGGAGCTGTTGGGGCAGGGGTGTAAATTATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000433932.5
CDS-3UTR CCA 90 bp ATAATTTACACCCCTGCCCCAACAGCTCCTTCCCTCCTAGGGACTTCTGTGTCCGGCTGGGGGCCCAACTaGGGAGGAAACCGAGACAAA +
Preference number: 4 (lower is better)
Translates to: IIYTPAPTAPSLLGTSVSGWGPN*GGNRDK
Trigger: TTTGTCTCGGTTTCCTCCCCAGTTGGGCCCCCAGCC...GGACACAGAAGTCCCTAGGAGGGAAGGAGCTGTTGGGGCAGGGGTGTAAATTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS-3UTR TCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGAGGGCCTGAACTGCACTaGGCAGCACCGCACAGAGGA +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRGPELH*AAPHRG
Trigger: TCCTCTGTGCGGTGCTGCTCAGTGCAGTTCAGGCCC...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000542506.5
CDS-3UTR TCA 90 bp TGGAAGTGCATGTGGTTCCACCAACTGGCGGGGGCCCCCTTCAGGTGGCCAATCTGGCCAATCACAAAATaGTGTAGCAGATGGTTCCAC +
Preference number: 4 (lower is better)
Translates to: WKCMWFHQLAGAPFRWPIWPITK*CSRWFH
Trigger: GTGGAACCATCTGCTACATCATTTTGTGATTGGCCA...GATTGGCCACCTGAAGGGGGCCCCCGCCAGTTGGTGGAACCACATGCACTTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000424501.5
CDS-3UTR TCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGAGATGTCGGCGAAGGCTaGCAGCAGGGGCTTGGACTG +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRDVGEG*QQGLGL
Trigger: CAGTCCAAGCCCCTGCTGTCAGCCTTCGCCGACATC...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000460649.5
ENST00000536991.5
ENST00000542506.5
CDS-3UTR GCA 90 bp GAGTTTGAGTCAGAGGCTTTATGTCCCCAAACCCAACCCCCTCTGAGTATTAAACCAGAGCCAGCCGCCTaGGCGCCGGGTTTTCAGCAC +
Preference number: 4 (lower is better)
Translates to: EFESEALCPQTQPPLSIKPEPAA*APGFQH
Trigger: GTGCTGAAAACCCGGCGCGCAGGCGGCTGGCTCTGG...TTTAATACTCAGAGGGGGTTGGGTTTGGGGACATAAAGCCTCTGACTCAAACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR GCA 90 bp CCTCTTCTGTTACCCTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAAGCCTGGGCCTGAACTaGACTGAGCAGCACCGCACA +
Preference number: 4 (lower is better)
Translates to: PLLLPSWFSLFTNYLHVPSLGLN*TEQHRT
Trigger: TGTGCGGTGCTGCTCAGTGCAGTTCAGGCCCAGGCT...TGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAGGGTAACAGAAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000433932.5
CDS-3UTR GCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGATGCCCAAAGTCATGCTaGAGCCAGCCAGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRCPKSC*SQPAWA
Trigger: GGCCCAGGCTGGCTGGCTGCAGCATGACTTTGGGCA...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000542506.5
CDS-3UTR CCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGATGTGGTTCCACCAACTaGCGGGGGCCCCCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRCGSTN*RGPPSG
Trigger: ACCTGAAGGGGGCCCCCGCCAGTTGGTGGAACCACA...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000542506.5
CDS-3UTR CCA 90 bp CTGGAAGTGCATGTGGTTCCACCAACTGGCGGGGGCCCCCTTCAGGTGGCCAATATGCATGTTGATGTCTaGGTCTTTGCGGAAGCAGTT +
Preference number: 4 (lower is better)
Translates to: LEVHVVPPTGGGPLQVANMHVDV*VFAEAV
Trigger: AACTGCTTCCGCAAAGACCCAGACATCAACATGCAT...ATTGGCCACCTGAAGGGGGCCCCCGCCAGTTGGTGGAACCACATGCACTTCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000424501.5
CDS-3UTR CCA 90 bp ATAATTTACACCCCTGCCCCAACAGCTCCTTCCCTCCTAGGGACTTCTGTGTCCCATGTGGCCTGGAGCTaGGTGGAAACCCAGTCCATG +
Preference number: 4 (lower is better)
Translates to: IIYTPAPTAPSLLGTSVSHVAWS*VETQSM
Trigger: CATGGACTGGGTTTCCACCCAGCTCCAGGCCACATG...GGACACAGAAGTCCCTAGGAGGGAAGGAGCTGTTGGGGCAGGGGTGTAAATTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000536991.5
CDS-3UTR CCA 90 bp AATAATTTACACCCCTGCCCCAACAGCTCCTTCCCTCCTAGGGACTTCTGTGTCAGCCTCCTGGGTAGCTaGGATTACAGGCGCGTGCCA +
Preference number: 4 (lower is better)
Translates to: NNLHPCPNSSFPPRDFCVSLLGS*DYRRVP
Trigger: TGGCACGCGCCTGTAATCCCAGCTACCCAGGAGGCT...GACACAGAAGTCCCTAGGAGGGAAGGAGCTGTTGGGGCAGGGGTGTAAATTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CCA 90 bp ATAATTTACACCCCTGCCCCAACAGCTCCTTCCCTCCTAGGGACTTCTGTGTCCGGTGAGGGGTGCGAGTaGCACTCTTCAGTGACAGGT +
Preference number: 4 (lower is better)
Translates to: IIYTPAPTAPSLLGTSVSGEGCE*HSSVTG
Trigger: ACCTGTCACTGAAGAGTGCCACTCGCACCCCTCACC...GGACACAGAAGTCCCTAGGAGGGAAGGAGCTGTTGGGGCAGGGGTGTAAATTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS-3UTR TCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGACATGGTTGGCCTTCATaGGCCCCATCCGCTCCACTG +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRHGWPS*APSAPL
Trigger: CAGTGGAGCGGATGGGGCTCATGAAGGCCAACCATG...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000542506.5
CDS-3UTR TCA 90 bp CGTGCCACCACGCCCGGCATGAGTGGAATTTTAGTGTTAAATCTCTTCCTGACTTGGAGTGCAGTGGTGTaGTCTCAGCTCGCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: RATTPGMSGILVLNLFLTWSAVV*SQLAAG
Trigger: GCCTGCAGCGAGCTGAGATCACACCACTGCACTCCA...AGTCAGGAAGAGATTTAACACTAAAATTCCACTCATGCCGGGCGTGGTGGCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR TCA 90 bp GCCCGGCATGAGTGGAATTTTAGTGTTAAATCTCTTCCTGACTCTGGGTTCAGTGGATGCCAGGGAAGGTaGGGGGTGCGAGTGGCACTC +
Preference number: 4 (lower is better)
Translates to: ARHEWNFSVKSLPDSGFSGCQGR*GVRVAL
Trigger: GAGTGCCACTCGCACCCCTCACCTTCCCTGGCATCC...ACTGAACCCAGAGTCAGGAAGAGATTTAACACTAAAATTCCACTCATGCCGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS-3UTR GCA 90 bp CTGTGTGTCCCTTTGTGGCCATGTAAGAGACCACACTGCTGTAGGCTGAGAAGGGGCTCAAAGCTGGGCTaGTCTGGAGACAGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LCVPLWPCKRPHCCRLRRGSKLG*SGDSSP
Trigger: TGGAGAACTGTCTCCAGAGCAGCCCAGCTTTGAGCC...CCTTCTCAGCCTACAGCAGTGTGGTCTCTTACATGGCCACAAAGGGACACACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR GCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGAAGCCTGGGCCTGAACTaGACTGAGCAGCACCGCACA +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRSLGLN*TEQHRT
Trigger: TGTGCGGTGCTGCTCAGTGCAGTTCAGGCCCAGGCT...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000542506.5
CDS-3UTR GCA 90 bp ATAATTTACACCCCTGCCCCAACAGCTCCTTCCCTCCTAGGGACTTCTGTGTCCCAGACTTGTGGACATTaGATGTGGCCTGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: IIYTPAPTAPSLLGTSVSQTCGH*MWPGAG
Trigger: CCCAGCTCCAGGCCACATGCAATGTCCACAAGTCTG...GGACACAGAAGTCCCTAGGAGGGAAGGAGCTGTTGGGGCAGGGGTGTAAATTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000536991.5
CDS-3UTR GCA 90 bp ATAATTTACACCCCTGCCCCAACAGCTCCTTCCCTCCTAGGGACTTCTGTGTCCTTGGCACACAAGGACTaGACCAGGGGAGCCACTTTG +
Preference number: 4 (lower is better)
Translates to: IIYTPAPTAPSLLGTSVSLAHKD*TRGATL
Trigger: CAAAGTGGCTCCCCTGGTGCAGTCCTTGTGTGCCAA...GGACACAGAAGTCCCTAGGAGGGAAGGAGCTGTTGGGGCAGGGGTGTAAATTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000536991.5
CDS-3UTR GCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGAGGCCCCAAATCACACTaGGGGAAGCTCCAGCGTTGG +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRGPKSH*GKLQRW
Trigger: CCAACGCTGGAGCTTCCCGCAGTGTGATTTGGGGCC...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000542506.5
CDS-3UTR CCA 90 bp CAAGGCAAAGAAGAAGGGATGCATGTTGATGTCTGGGTCTTTGCGGAAGCAGTTTGTGGTTCCACCAACTaGCGGGGGCCCCCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: QGKEEGMHVDVWVFAEAVCGSTN*RGPPSG
Trigger: ACCTGAAGGGGGCCCCCGCCAGTTGGTGGAACCACA...AACTGCTTCCGCAAAGACCCAGACATCAACATGCATCCCTTCTTCTTTGCCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000424501.5
CDS-3UTR CCA 90 bp AATAATTTACACCCCTGCCCCAACAGCTCCTTCCCTCCTAGGGACTTCTGTGTCTGCTGGAAGTGCATGTaGTTCCACCAACTGGCGGGG +
Preference number: 4 (lower is better)
Translates to: NNLHPCPNSSFPPRDFCVCWKCM*FHQLAG
Trigger: CCCCGCCAGTTGGTGGAACCACATGCACTTCCAGCA...GACACAGAAGTCCCTAGGAGGGAAGGAGCTGTTGGGGCAGGGGTGTAAATTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000433932.5
CDS-3UTR CCA 90 bp CCTCTTCTGTTACCCTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCATGCTGGAAGTGCATGTaGTTCCACCAACTGGCGGGG +
Preference number: 4 (lower is better)
Translates to: PLLLPSWFSLFTNYLHVPCWKCM*FHQLAG
Trigger: CCCCGCCAGTTGGTGGAACCACATGCACTTCCAGCA...TGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAGGGTAACAGAAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000433932.5
CDS-3UTR CCA 90 bp GTGTTTGCTCAGATTGGGCAGCCTATGCCCAAAGCTACTTGGCTAAACAGGCTGTGGCCTGGAGCTGGGTaGAAACCCAGTCCATGTTCC +
Preference number: 4 (lower is better)
Translates to: VFAQIGQPMPKATWLNRLWPGAG*KPSPCS
Trigger: GGAACATGGACTGGGTTTCCACCCAGCTCCAGGCCA...CAGCCTGTTTAGCCAAGTAGCTTTGGGCATAGGCTGCCCAATCTGAGCAAACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CCA 90 bp CCTCTTCTGTTACCCTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCATGGCCTGGAGCTGGGTaGAAACCCAGTCCATGTTCC +
Preference number: 4 (lower is better)
Translates to: PLLLPSWFSLFTNYLHVPWPGAG*KPSPCS
Trigger: GGAACATGGACTGGGTTTCCACCCAGCTCCAGGCCA...TGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAGGGTAACAGAAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000536991.5
CDS-3UTR CCA 90 bp GTGTTTGCTCAGATTGGGCAGCCTATGCCCAAAGCTACTTGGCTAAACAGGCTGAGCTCCCCTCTGCCTTaGCTCCAGAGTCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: VFAQIGQPMPKATWLNRLSSPLP*LQSLPP
Trigger: AGGAGGAAGACTCTGGAGCCAAGGCAGAGGGGAGCT...CAGCCTGTTTAGCCAAGTAGCTTTGGGCATAGGCTGCCCAATCTGAGCAAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CCA 90 bp CTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAAACTAGAAAAAGGAGCTCCTGCTGGCGAGTaGAGACCGGCACCTAGGTCC +
Preference number: 4 (lower is better)
Translates to: LLVLSVHQLPACAKLEKGAPAGE*RPAPRS
Trigger: GGACCTAGGTGCCGGTCTCCACTCGCCAGCAGGAGC...TCCTTTTTCTAGTTTGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433932.5
CDS-3UTR CCA 90 bp CTCCTCTTCTGTTACCCTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCCCCATCCTCGAGAATaGGCTCCTTTCCTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: LLFCYPPGSLCSPTTCMCPHPRE*APFLLP
Trigger: AGGGAGCAGGAAAGGAGCCCATTCTCGAGGATGGGG...GCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAGGGTAACAGAAGAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433932.5
CDS-3UTR CCA 90 bp GCCCGGCATGAGTGGAATTTTAGTGTTAAATCTCTTCCTGACTCTGGGTTCAGTGAGAGGCAGCAAGGCTaGGGGCCCAACTGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: ARHEWNFSVKSLPDSGFSERQQG*GPNWGG
Trigger: TCCTCCCCAGTTGGGCCCCCAGCCTTGCTGCCTCTC...ACTGAACCCAGAGTCAGGAAGAGATTTAACACTAAAATTCCACTCATGCCGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS-3UTR TCA 90 bp AATAATTTACACCCCTGCCCCAACAGCTCCTTCCCTCCTAGGGACTTCTGTGTCTCCACTTTGAGGTGCTaGAGACCGACAGGTGCCCAA +
Preference number: 4 (lower is better)
Translates to: NNLHPCPNSSFPPRDFCVSTLRC*RPTGAQ
Trigger: TTGGGCACCTGTCGGTCTTCAGCACCTCAAAGTGGA...GACACAGAAGTCCCTAGGAGGGAAGGAGCTGTTGGGGCAGGGGTGTAAATTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000433932.5
CDS-3UTR TCA 90 bp GAGTTTGAGTCAGAGGCTTTATGTCCCCAAACCCAACCCCCTCTGAGTATTAAAGATGTCGGCGAAGGCTaGCAGCAGGGGCTTGGACTG +
Preference number: 4 (lower is better)
Translates to: EFESEALCPQTQPPLSIKDVGEG*QQGLGL
Trigger: CAGTCCAAGCCCCTGCTGTCAGCCTTCGCCGACATC...TTTAATACTCAGAGGGGGTTGGGTTTGGGGACATAAAGCCTCTGACTCAAACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000460649.5
ENST00000536991.5
CDS-3UTR TCA 90 bp ATAATTTACACCCCTGCCCCAACAGCTCCTTCCCTCCTAGGGACTTCTGTGTCCCCTTTAGTGAGTGGATaGTGTCGGCGAAGGCTGACA +
Preference number: 4 (lower is better)
Translates to: IIYTPAPTAPSLLGTSVSPLVSG*CRRRLT
Trigger: TGTCAGCCTTCGCCGACATCATCCACTCACTAAAGG...GGACACAGAAGTCCCTAGGAGGGAAGGAGCTGTTGGGGCAGGGGTGTAAATTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000536991.5
CDS-3UTR TCA 90 bp TGCCACCACGCCCGGCATGAGTGGAATTTTAGTGTTAAATCTCTTCCTGACTCTAGGGGGAAGCGGGTGTaGGGGCTGATGATAAGCCCT +
Preference number: 4 (lower is better)
Translates to: CHHARHEWNFSVKSLPDSRGKRV*GLMISP
Trigger: AGGGCTTATCATCAGCCCTCACACCCGCTTCCCCCT...AGAGTCAGGAAGAGATTTAACACTAAAATTCCACTCATGCCGGGCGTGGTGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR TCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGACAGCATGCCGCCAAATaGATCTGCCAGGACCATGGC +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRQHAAK*ICQDHG
Trigger: GCCATGGTCCTGGCAGATTCATTTGGCGGCATGCTG...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460649.5
CDS-3UTR TCA 90 bp CTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAAACTAGAAAAAGGAGCGGAGAGCTTGCAGTaGGCCGAGATTGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: LLVLSVHQLPACAKLEKGAESLQ*AEIAPL
Trigger: CAGTGGCGCAATCTCGGCTCACTGCAAGCTCTCCGC...TCCTTTTTCTAGTTTGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS-3UTR TCA 90 bp TGCCACCACGCCCGGCATGAGTGGAATTTTAGTGTTAAATCTCTTCCTGACTCTTGTGCCACCCCAATCTaGAGCCCTGGAGGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: CHHARHEWNFSVKSLPDSCATPI*SPGGQL
Trigger: CAGCTGACCTCCAGGGCTTCAGATTGGGGTGGCACA...AGAGTCAGGAAGAGATTTAACACTAAAATTCCACTCATGCCGGGCGTGGTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS-3UTR TCA 90 bp ATAATTTACACCCCTGCCCCAACAGCTCCTTCCCTCCTAGGGACTTCTGTGTCCCATGAAAGGGCCAGTTaGTGTTGGGAGAGATGGCCT +
Preference number: 4 (lower is better)
Translates to: IIYTPAPTAPSLLGTSVSHERAS*CWERWP
Trigger: AGGCCATCTCTCCCAACATCAACTGGCCCTTTCATG...GGACACAGAAGTCCCTAGGAGGGAAGGAGCTGTTGGGGCAGGGGTGTAAATTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS-3UTR GCA 90 bp CCTCTTCTGTTACCCTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAAAGGGTGAGCCAGGCTaGACCATCCAGCAGCAAGAT +
Preference number: 4 (lower is better)
Translates to: PLLLPSWFSLFTNYLHVPKGEPG*TIQQQD
Trigger: ATCTTGCTGCTGGATGGTGCAGCCTGGCTCACCCTT...TGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAGGGTAACAGAAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000433932.5
CDS-3UTR GCA 90 bp GTGTTTGCTCAGATTGGGCAGCCTATGCCCAAAGCTACTTGGCTAAACAGGCTGCTGAAGACCGACAGGTaGCCAAAGTCATGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: VFAQIGQPMPKATWLNRLLKTDR*PKSCCS
Trigger: GCTGCAGCATGACTTTGGGCACCTGTCGGTCTTCAG...CAGCCTGTTTAGCCAAGTAGCTTTGGGCATAGGCTGCCCAATCTGAGCAAACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR GCA 90 bp ATAATTTACACCCCTGCCCCAACAGCTCCTTCCCTCCTAGGGACTTCTGTGTCCGCATGGTGCTGGAAGTaGATGTGGTTCCACCAACTG +
Preference number: 4 (lower is better)
Translates to: IIYTPAPTAPSLLGTSVSAWCWK*MWFHQL
Trigger: CAGTTGGTGGAACCACATGCACTTCCAGCACCATGC...GGACACAGAAGTCCCTAGGAGGGAAGGAGCTGTTGGGGCAGGGGTGTAAATTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000433932.5
CDS-3UTR GCA 90 bp CTGTGTGTCCCTTTGTGGCCATGTAAGAGACCACACTGCTGTAGGCTGAGAAGGGCATCTAGCCAGAGCTaGCCTGACTCCTTTAGTGAG +
Preference number: 4 (lower is better)
Translates to: LCVPLWPCKRPHCCRLRRASSQS*PDSFSE
Trigger: CTCACTAAAGGAGTCAGGGCAGCTCTGGCTAGATGC...CCTTCTCAGCCTACAGCAGTGTGGTCTCTTACATGGCCACAAAGGGACACACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR GCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGACCTCAAGCTCCCCTCTaGCTTGGCTCCAGAGTCTTC +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRPQAPL*LGSRVF
Trigger: GAAGACTCTGGAGCCAAGGCAGAGGGGAGCTTGAGG...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000460649.5
ENST00000536991.5
ENST00000542506.5
CDS-3UTR CCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGATGCTGGAAGTGCATGTaGTTCCACCAACTGGCGGGG +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRCWKCM*FHQLAG
Trigger: CCCCGCCAGTTGGTGGAACCACATGCACTTCCAGCA...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000542506.5
CDS-3UTR CCA 90 bp GTGTTTGCTCAGATTGGGCAGCCTATGCCCAAAGCTACTTGGCTAAACAGGCTGGGCTTGGCATGGTGCTaGAAGTGCATGTGGTTCCAC +
Preference number: 4 (lower is better)
Translates to: VFAQIGQPMPKATWLNRLGLAWC*KCMWFH
Trigger: GTGGAACCACATGCACTTCCAGCACCATGCCAAGCC...CAGCCTGTTTAGCCAAGTAGCTTTGGGCATAGGCTGCCCAATCTGAGCAAACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGATGGCCTGGAGCTGGGTaGAAACCCAGTCCATGTTCC +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRWPGAG*KPSPCS
Trigger: GGAACATGGACTGGGTTTCCACCCAGCTCCAGGCCA...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000460649.5
ENST00000536991.5
ENST00000542506.5
CDS-3UTR CCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGACATGTGGCCTGGAGCTaGGTGGAAACCCAGTCCATG +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRHVAWS*VETQSM
Trigger: CATGGACTGGGTTTCCACCCAGCTCCAGGCCACATG...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000460649.5
ENST00000536991.5
ENST00000542506.5
CDS-3UTR CCA 90 bp AGGCTGAGAAGGCCACAGTGGTTCAGGTGCTTTGAGGACTTGGTCTTGGCTCAACTGACAGCAGGGGCTTaGACTGGTACTCTATGCCAT +
Preference number: 4 (lower is better)
Translates to: RLRRPQWFRCFEDLVLAQLTAGA*TGTLCH
Trigger: ATGGCATAGAGTACCAGTCCAAGCCCCTGCTGTCAG...TTGAGCCAAGACCAAGTCCTCAAAGCACCTGAACCACTGTGGCCTTCTCAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CCA 90 bp CTGTGTGTCCCTTTGTGGCCATGTAAGAGACCACACTGCTGTAGGCTGAGAAGGCCAGACTGGGCAGGGTaGCTGTTGTTATTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: LCVPLWPCKRPHCCRLRRPDWAG*LLLLVK
Trigger: CTTCACCAATAACAACAGCCACCCTGCCCAGTCTGG...CCTTCTCAGCCTACAGCAGTGTGGTCTCTTACATGGCCACAAAGGGACACACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CCA 90 bp ATGCCCAAAGCTACTTGGCTAAACAGGCTGGTGACACCACACCCAAAAGGTGGCCCTCTTCTTCCAGACTaGGCAGGGTGGCTGTTGTTA +
Preference number: 4 (lower is better)
Translates to: MPKATWLNRLVTPHPKGGPLLPD*AGWLLL
Trigger: TAACAACAGCCACCCTGCCCAGTCTGGAAGAAGAGG...GCCACCTTTTGGGTGTGGTGTCACCAGCCTGTTTAGCCAAGTAGCTTTGGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGAAGCTCCCCTCTGCCTTaGCTCCAGAGTCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRSSPLP*LQSLPP
Trigger: AGGAGGAAGACTCTGGAGCCAAGGCAGAGGGGAGCT...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000460649.5
ENST00000536991.5
ENST00000542506.5
CDS-3UTR CCA 90 bp ATAATTTACACCCCTGCCCCAACAGCTCCTTCCCTCCTAGGGACTTCTGTGTCCAGTGATCCTCCTGCCTaGACCTCCCAAAAGTGTTGG +
Preference number: 4 (lower is better)
Translates to: IIYTPAPTAPSLLGTSVSSDPPA*TSQKCW
Trigger: CCAACACTTTTGGGAGGTCCAGGCAGGAGGATCACT...GGACACAGAAGTCCCTAGGAGGGAAGGAGCTGTTGGGGCAGGGGTGTAAATTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CCA 90 bp CTCCTCTTCTGTTACCCTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCGCAGCCCCAAATTCCTaGGCTCAAAGGATGGTCCCA +
Preference number: 4 (lower is better)
Translates to: LLFCYPPGSLCSPTTCMCAAPNS*AQRMVP
Trigger: TGGGACCATCCTTTGAGCCCAGGAATTTGGGGCTGC...GCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAGGGTAACAGAAGAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS-3UTR CCA 90 bp CTCCTCTTCTGTTACCCTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAGGCTGGAGTGCAGTaGCACAATCGGAGCTTACTG +
Preference number: 4 (lower is better)
Translates to: LLFCYPPGSLCSPTTCMCQAGVQ*HNRSLL
Trigger: CAGTAAGCTCCGATTGTGCCACTGCACTCCAGCCTG...GCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAGGGTAACAGAAGAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536991.5
3UTR CAA 72 bp GTTTGCTCAGATTGGGCAGCCTATGCCCAAAGCTACTaGGCTAAACAGGCTGGTGACACCACACCCAAAAGG +
Preference number: 4 (lower is better)
Translates to: VCSDWAAYAQSY*AKQAGDTTPKR
Trigger: CCTTTTGGGTGTGGTGTCACCAGCCTGTTTAGCCAAGTAGCTTTGGGCATAGGCTGCCCAATCTGAGCAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR TCA 90 bp CTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAAACTAGAAAAAGGACATGGTTGGCCTTCATaGGCCCCATCCGCTCCACTG +
Preference number: 4 (lower is better)
Translates to: LLVLSVHQLPACAKLEKGHGWPS*APSAPL
Trigger: CAGTGGAGCGGATGGGGCTCATGAAGGCCAACCATG...TCCTTTTTCTAGTTTGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000433932.5
CDS-3UTR TCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGATCCACTTTGAGGTGCTaGAGACCGACAGGTGCCCAA +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRSTLRC*RPTGAQ
Trigger: TTGGGCACCTGTCGGTCTTCAGCACCTCAAAGTGGA...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000542506.5
CDS-3UTR TCA 90 bp ATAATTTACACCCCTGCCCCAACAGCTCCTTCCCTCCTAGGGACTTCTGTGTCCAGAAGGGATGCATGTTaGTGTCTGGGTCTTTGCGGA +
Preference number: 4 (lower is better)
Translates to: IIYTPAPTAPSLLGTSVSRRDAC*CLGLCG
Trigger: TCCGCAAAGACCCAGACATCAACATGCATCCCTTCT...GGACACAGAAGTCCCTAGGAGGGAAGGAGCTGTTGGGGCAGGGGTGTAAATTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000433932.5
CDS-3UTR TCA 90 bp AGGCTGAGAAGGCCACAGTGGTTCAGGTGCTTTGAGGACTTGGTCTTGGCTCAAGCCCTAGGAGGCTCCTaGGTCATATTCCTATGTTTG +
Preference number: 4 (lower is better)
Translates to: RLRRPQWFRCFEDLVLAQALGGS*VIFLCL
Trigger: CAAACATAGGAATATGACTCAGGAGCCTCCTAGGGC...TTGAGCCAAGACCAAGTCCTCAAAGCACCTGAACCACTGTGGCCTTCTCAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR TCA 90 bp ATAGGAAGGATCAGCACCTATTTTGGAGTGAGGAAGCCAATGGAGGTACAACTCGGACGCTCATCTCCTTaGCTGTCTGCCATCCCCTCC +
Preference number: 4 (lower is better)
Translates to: IGRISTYFGVRKPMEVQLGRSSP*LSAIPS
Trigger: GGAGGGGATGGCAGACAGTCAAGGAGATGAGCGTCC...GAGTTGTACCTCCATTGGCTTCCTCACTCCAAAATAGGTGCTGATCCTTCCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR TCA 90 bp ATAATTTACACCCCTGCCCCAACAGCTCCTTCCCTCCTAGGGACTTCTGTGTCCGACAAAGAGGAGGCATaGGCACAGGAAGGTCATGAA +
Preference number: 4 (lower is better)
Translates to: IIYTPAPTAPSLLGTSVSDKEEA*AQEGHE
Trigger: TTCATGACCTTCCTGTGCTCATGCCTCCTCTTTGTC...GGACACAGAAGTCCCTAGGAGGGAAGGAGCTGTTGGGGCAGGGGTGTAAATTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS-3UTR TCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGACACCTCTCAGGGCTATaGGACTTCCGTCCCTTCTTG +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRHLSGL*DFRPFL
Trigger: CAAGAAGGGACGGAAGTCTCATAGCCCTGAGAGGTG...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542506.5
CDS-3UTR GCA 90 bp CATGAGTGGAATTTTAGTGTTAAATCTCTTCCTGACTCTGGGTTCAGTAGGTCCCTCCAGGAGTGGATTTaGTGGCGCGCGCCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: HEWNFSVKSLPDSGFSRSLQEWI*WRAPRA
Trigger: GGCTCTGGGCGCGCGCCAGCAAATCCACTCCTGGAG...GGACCTACTGAACCCAGAGTCAGGAAGAGATTTAACACTAAAATTCCACTCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR GCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGAAAGGGTGAGCCAGGCTaGACCATCCAGCAGCAAGAT +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRKGEPG*TIQQQD
Trigger: ATCTTGCTGCTGGATGGTGCAGCCTGGCTCACCCTT...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000542506.5
CDS-3UTR GCA 90 bp ATAGGAAGGATCAGCACCTATTTTGGAGTGAGGAAGCCAATGGAGGTACAACTCAGCCTGGGCCTGAACTaGACTGAGCAGCACCGCACA +
Preference number: 4 (lower is better)
Translates to: IGRISTYFGVRKPMEVQLSLGLN*TEQHRT
Trigger: TGTGCGGTGCTGCTCAGTGCAGTTCAGGCCCAGGCT...GAGTTGTACCTCCATTGGCTTCCTCACTCCAAAATAGGTGCTGATCCTTCCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR GCA 90 bp CCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAAACTAGAAAAAGGAAATGCCCAAAGTCATGCTaGAGCCAGCCAGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PGSLCSPTTCMCQTRKRKCPKSC*SQPAWA
Trigger: GGCCCAGGCTGGCTGGCTGCAGCATGACTTTGGGCA...TTTCCTTTTTCTAGTTTGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000433932.5
CDS-3UTR GCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGACTGAAGACCGACAGGTaGCCAAAGTCATGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRLKTDR*PKSCCS
Trigger: GCTGCAGCATGACTTTGGGCACCTGTCGGTCTTCAG...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000542506.5
CDS-3UTR GCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGACAGACTTGTGGACATTaGATGTGGCCTGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRQTCGH*MWPGAG
Trigger: CCCAGCTCCAGGCCACATGCAATGTCCACAAGTCTG...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000460649.5
ENST00000536991.5
ENST00000542506.5
CDS-3UTR GCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGATTGGCACACAAGGACTaGACCAGGGGAGCCACTTTG +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRLAHKD*TRGATL
Trigger: CAAAGTGGCTCCCCTGGTGCAGTCCTTGTGTGCCAA...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000460649.5
ENST00000536991.5
ENST00000542506.5
CDS-3UTR GCA 90 bp CTGTGTGTCCCTTTGTGGCCATGTAAGAGACCACACTGCTGTAGGCTGAGAAGGTGGACTGGTACTCTATaGCATGCTTGGCACACAAGG +
Preference number: 4 (lower is better)
Translates to: LCVPLWPCKRPHCCRLRRWTGTL*HAWHTR
Trigger: CCTTGTGTGCCAAGCATGGCATAGAGTACCAGTCCA...CCTTCTCAGCCTACAGCAGTGTGGTCTCTTACATGGCCACAAAGGGACACACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR GCA 90 bp TGCCACCACGCCCGGCATGAGTGGAATTTTAGTGTTAAATCTCTTCCTGACTCTCCTCAAGCTCCCCTCTaGCTTGGCTCCAGAGTCTTC +
Preference number: 4 (lower is better)
Translates to: CHHARHEWNFSVKSLPDSPQAPL*LGSRVF
Trigger: GAAGACTCTGGAGCCAAGGCAGAGGGGAGCTTGAGG...AGAGTCAGGAAGAGATTTAACACTAAAATTCCACTCATGCCGGGCGTGGTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000536991.5
CDS-3UTR GCA 90 bp CTCCTCTTCTGTTACCCTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCGACCCTATCCCAACATaGCTTAGGACGCTCATCTCC +
Preference number: 4 (lower is better)
Translates to: LLFCYPPGSLCSPTTCMCDPIPT*LRTLIS
Trigger: GGAGATGAGCGTCCTAAGGCATGTTGGGATAGGGTC...GCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAGGGTAACAGAAGAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR GCA 90 bp TCTGTTACCCTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAAACTACCTCTAGCAGGGGGCTaGCTCTTCCAACCATCCCTT +
Preference number: 4 (lower is better)
Translates to: SVTLLVLSVHQLPACAKLPLAGG*LFQPSL
Trigger: AAGGGATGGTTGGAAGAGGCAGCCCCCTGCTAGAGG...TAGTTTGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAGGGTAACAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS-3UTR CCA 90 bp CATGAGTGGAATTTTAGTGTTAAATCTCTTCCTGACTCTGGGTTCAGTAGGTCCCAGGAGTGGATTTGCTaGCGCGCGCCCAGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: HEWNFSVKSLPDSGFSRSQEWIC*RAPRAS
Trigger: GCTGGCTCTGGGCGCGCGCCAGCAAATCCACTCCTG...GGACCTACTGAACCCAGAGTCAGGAAGAGATTTAACACTAAAATTCCACTCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGATGGTGGGCTCAAAGCTaGGCTGCTCTGGAGACAGTT +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRWWAQS*AALETV
Trigger: AACTGTCTCCAGAGCAGCCCAGCTTTGAGCCCACCA...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000542506.5
CDS-3UTR CCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGAGGCTTGGCATGGTGCTaGAAGTGCATGTGGTTCCAC +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRGLAWC*KCMWFH
Trigger: GTGGAACCACATGCACTTCCAGCACCATGCCAAGCC...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000542506.5
CDS-3UTR CCA 90 bp TCTGTTACCCTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAAACTATGGCCTGGAGCTGGGTaGAAACCCAGTCCATGTTCC +
Preference number: 4 (lower is better)
Translates to: SVTLLVLSVHQLPACAKLWPGAG*KPSPCS
Trigger: GGAACATGGACTGGGTTTCCACCCAGCTCCAGGCCA...TAGTTTGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAGGGTAACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000536991.5
CDS-3UTR CCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGAACATTGCATGTGGCCTaGAGCTGGGTGGAAACCCAG +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRTLHVA*SWVETQ
Trigger: CTGGGTTTCCACCCAGCTCCAGGCCACATGCAATGT...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000460649.5
ENST00000536991.5
ENST00000542506.5
CDS-3UTR CCA 90 bp CCTCTTCTGTTACCCTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAAGCAGGGGCTTGGACTaGTACTCTATGCCATGCTTG +
Preference number: 4 (lower is better)
Translates to: PLLLPSWFSLFTNYLHVPSRGLD*YSMPCL
Trigger: CAAGCATGGCATAGAGTACCAGTCCAAGCCCCTGCT...TGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAGGGTAACAGAAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000536991.5
CDS-3UTR CCA 90 bp CCTCTTCTGTTACCCTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCACTGACAGCAGGGGCTTaGACTGGTACTCTATGCCAT +
Preference number: 4 (lower is better)
Translates to: PLLLPSWFSLFTNYLHVPLTAGA*TGTLCH
Trigger: ATGGCATAGAGTACCAGTCCAAGCCCCTGCTGTCAG...TGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAGGGTAACAGAAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000536991.5
CDS-3UTR CCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGACCCAACTCAGCCCCCTaGCATTATGCCCAGTACAAG +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRPNSAP*HYAQYK
Trigger: CTTGTACTGGGCATAATGCCAGGGGGCTGAGTTGGG...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460649.5
CDS-3UTR CCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGACCTCCACCGTTGTTCTaGGTAGGGCTCCACATTTCC +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRPPPLF*VGLHIS
Trigger: GGAAATGTGGAGCCCTACCCAGAACAACGGTGGAGG...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542506.5
CDS-3UTR CCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGACCCATCAACTCCAGCTaGCTTCACCTCTCAGGGCTA +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRPINSS*LHLSGL
Trigger: TAGCCCTGAGAGGTGAAGCCAGCTGGAGTTGATGGG...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542506.5
CDS-3UTR TCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGACAGATGGTTCCACTTTaGGGTGCTGAAGACCGACAG +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRQMVPL*GAEDRQ
Trigger: CTGTCGGTCTTCAGCACCTCAAAGTGGAACCATCTG...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000542506.5
CDS-3UTR TCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGACCTTTAGTGAGTGGATaGTGTCGGCGAAGGCTGACA +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRPLVSG*CRRRLT
Trigger: TGTCAGCCTTCGCCGACATCATCCACTCACTAAAGG...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000460649.5
ENST00000536991.5
ENST00000542506.5
CDS-3UTR TCA 90 bp TCTGTTACCCTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAAACTACATGGGTGGTGCATCTaGCCCTATCCCAACATGCCT +
Preference number: 4 (lower is better)
Translates to: SVTLLVLSVHQLPACAKLHGWCI*PYPNMP
Trigger: AGGCATGTTGGGATAGGGTCAGATGCACCACCCATG...TAGTTTGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAGGGTAACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR TCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGAGGCCAGCTAGAAAAGTaGCTTCACAAAGCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRGQLEK*LHKARC
Trigger: GCACCTGGCTTTGTGAAGTCACTTTTCTAGCTGGCC...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460649.5
CDS-3UTR GCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGAGCATGGTGCTGGAAGTaGATGTGGTTCCACCAACTG +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRAWCWK*MWFHQL
Trigger: CAGTTGGTGGAACCACATGCACTTCCAGCACCATGC...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000542506.5
CDS-3UTR GCA 90 bp GCTTTGAGGACTTGGTCTTGGCTCAATAGAGCCTCACTGGTGTTTGCTCAGATTCAGACTTGTGGACATTaGATGTGGCCTGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: ALRTWSWLNRASLVFAQIQTCGH*MWPGAG
Trigger: CCCAGCTCCAGGCCACATGCAATGTCCACAAGTCTG...AATCTGAGCAAACACCAGTGAGGCTCTATTGAGCCAAGACCAAGTCCTCAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR GCA 90 bp CTCCTCTTCTGTTACCCTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCTGGTACTCTATGCCATaGTTGGCACACAAGGACTGC +
Preference number: 4 (lower is better)
Translates to: LLFCYPPGSLCSPTTCMCWYSMP*LAHKDC
Trigger: GCAGTCCTTGTGTGCCAAGCATGGCATAGAGTACCA...GCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAGGGTAACAGAAGAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000536991.5
CDS-3UTR GCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGAGCATCTAGCCAGAGCTaGCCTGACTCCTTTAGTGAG +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRASSQS*PDSFSE
Trigger: CTCACTAAAGGAGTCAGGGCAGCTCTGGCTAGATGC...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000460649.5
ENST00000536991.5
ENST00000542506.5
CDS-3UTR GCA 90 bp GAGTTTGAGTCAGAGGCTTTATGTCCCCAAACCCAACCCCCTCTGAGTATTAAAATCCCCCACTCTGGGTaGTGGAGACAAGGATGTGGG +
Preference number: 4 (lower is better)
Translates to: EFESEALCPQTQPPLSIKIPHSG*WRQGCG
Trigger: CCCACATCCTTGTCTCCAGCACCCAGAGTGGGGGAT...TTTAATACTCAGAGGGGGTTGGGTTTGGGGACATAAAGCCTCTGACTCAAACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000460649.5
CDS-3UTR GCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGACTTCACAAAGCCAGGTaGAGTCAGGCCCCTTTTGGA +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRLHKAR*SQAPFG
Trigger: TCCAAAAGGGGCCTGACTGCACCTGGCTTTGTGAAG...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460649.5
CDS-3UTR GCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGACCATGGCTCAGTCCATaGCAGTGCCCTGATCAAATC +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRPWLSP*QCPDQI
Trigger: GATTTGATCAGGGCACTGGCATGGACTGAGCCATGG...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460649.5
CDS-3UTR GCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGAGAACTGGGGCACTTCTaGGTTTCTTCCCTTTCCCTC +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRELGHF*VSSLSL
Trigger: GAGGGAAAGGGAAGAAACGCAGAAGTGCCCCAGTTC...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542506.5
CDS-3UTR GCA 90 bp CTCCTCTTCTGTTACCCTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCTCTGCTCTACCCTTCTaGCCCATCGCCTTTCTCTAT +
Preference number: 4 (lower is better)
Translates to: LLFCYPPGSLCSPTTCMCSALPF*PIAFLY
Trigger: ATAGAGAAAGGCGATGGGGCAGAAGGGTAGAGCAGA...GCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAGGGTAACAGAAGAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS-3UTR GCA 90 bp GAGTTTGAGTCAGAGGCTTTATGTCCCCAAACCCAACCCCCTCTGAGTATTAAAAGGGAAGGTGAGGGGTaGGAGTGGCACTCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: EFESEALCPQTQPPLSIKREGEG*EWHSSV
Trigger: CACTGAAGAGTGCCACTCGCACCCCTCACCTTCCCT...TTTAATACTCAGAGGGGGTTGGGTTTGGGGACATAAAGCCTCTGACTCAAACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS-3UTR CCA 90 bp ACCCAGGCTGTTTTAAACCTAGTTCTCCAGCTAAGTAAAATGTGCCCAAATGGATCCCCCGGTGGGTCTTaGGCAACTCACAGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: TQAVLNLVLQLSKMCPNGSPGGS*ATHSWA
Trigger: AGCCCAGCTGTGAGTTGCCCAAGACCCACCGGGGGA...TCCATTTGGGCACATTTTACTTAGCTGGAGAACTAGGTTTAAAACAGCCTGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CCA 90 bp AATAATTTACACCCCTGCCCCAACAGCTCCTTCCCTCCTAGGGACTTCTGTGTCAAAGCTGGGCTGCTCTaGAGACAGTTCTCCAATCAG +
Preference number: 4 (lower is better)
Translates to: NNLHPCPNSSFPPRDFCVKAGLL*RQFSNQ
Trigger: CTGATTGGAGAACTGTCTCCAGAGCAGCCCAGCTTT...GACACAGAAGTCCCTAGGAGGGAAGGAGCTGTTGGGGCAGGGGTGTAAATTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000433932.5
CDS-3UTR CCA 90 bp TGCCACCACGCCCGGCATGAGTGGAATTTTAGTGTTAAATCTCTTCCTGACTCTTGGTGGGCTCAAAGCTaGGCTGCTCTGGAGACAGTT +
Preference number: 4 (lower is better)
Translates to: CHHARHEWNFSVKSLPDSWWAQS*AALETV
Trigger: AACTGTCTCCAGAGCAGCCCAGCTTTGAGCCCACCA...AGAGTCAGGAAGAGATTTAACACTAAAATTCCACTCATGCCGGGCGTGGTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CCA 90 bp CTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAAACTAGAAAAAGGACATGTGGCCTGGAGCTaGGTGGAAACCCAGTCCATG +
Preference number: 4 (lower is better)
Translates to: LLVLSVHQLPACAKLEKGHVAWS*VETQSM
Trigger: CATGGACTGGGTTTCCACCCAGCTCCAGGCCACATG...TCCTTTTTCTAGTTTGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000536991.5
CDS-3UTR CCA 90 bp GAGTTTGAGTCAGAGGCTTTATGTCCCCAAACCCAACCCCCTCTGAGTATTAAACATGTGGCCTGGAGCTaGGTGGAAACCCAGTCCATG +
Preference number: 4 (lower is better)
Translates to: EFESEALCPQTQPPLSIKHVAWS*VETQSM
Trigger: CATGGACTGGGTTTCCACCCAGCTCCAGGCCACATG...TTTAATACTCAGAGGGGGTTGGGTTTGGGGACATAAAGCCTCTGACTCAAACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000460649.5
ENST00000536991.5
CDS-3UTR CCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGAAGCAGGGGCTTGGACTaGTACTCTATGCCATGCTTG +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRSRGLD*YSMPCL
Trigger: CAAGCATGGCATAGAGTACCAGTCCAAGCCCCTGCT...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000460649.5
ENST00000536991.5
ENST00000542506.5
CDS-3UTR CCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGACTGACAGCAGGGGCTTaGACTGGTACTCTATGCCAT +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRLTAGA*TGTLCH
Trigger: ATGGCATAGAGTACCAGTCCAAGCCCCTGCTGTCAG...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000460649.5
ENST00000536991.5
ENST00000542506.5
CDS-3UTR CCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGACCAGACTGGGCAGGGTaGCTGTTGTTATTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRPDWAG*LLLLVK
Trigger: CTTCACCAATAACAACAGCCACCCTGCCCAGTCTGG...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000460649.5
ENST00000536991.5
ENST00000542506.5
CDS-3UTR CCA 90 bp CGTGCCACCACGCCCGGCATGAGTGGAATTTTAGTGTTAAATCTCTTCCTGACTCCAGACTGGGCAGGGTaGCTGTTGTTATTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: RATTPGMSGILVLNLFLTPDWAG*LLLLVK
Trigger: CTTCACCAATAACAACAGCCACCCTGCCCAGTCTGG...AGTCAGGAAGAGATTTAACACTAAAATTCCACTCATGCCGGGCGTGGTGGCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000536991.5
CDS-3UTR CCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGACCTCTTCTTCCAGACTaGGCAGGGTGGCTGTTGTTA +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRPLLPD*AGWLLL
Trigger: TAACAACAGCCACCCTGCCCAGTCTGGAAGAAGAGG...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000460649.5
ENST00000536991.5
ENST00000542506.5
CDS-3UTR CCA 90 bp GAGTTTGAGTCAGAGGCTTTATGTCCCCAAACCCAACCCCCTCTGAGTATTAAAAGCTCCCCTCTGCCTTaGCTCCAGAGTCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: EFESEALCPQTQPPLSIKSSPLP*LQSLPP
Trigger: AGGAGGAAGACTCTGGAGCCAAGGCAGAGGGGAGCT...TTTAATACTCAGAGGGGGTTGGGTTTGGGGACATAAAGCCTCTGACTCAAACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000460649.5
ENST00000536991.5
CDS-3UTR CCA 90 bp ATAATTTACACCCCTGCCCCAACAGCTCCTTCCCTCCTAGGGACTTCTGTGTCCCTTCTGTTACCCTCCTaGTTCTCTCTGTTCACCAAC +
Preference number: 4 (lower is better)
Translates to: IIYTPAPTAPSLLGTSVSLLLPS*FSLFTN
Trigger: GTTGGTGAACAGAGAGAACCAGGAGGGTAACAGAAG...GGACACAGAAGTCCCTAGGAGGGAAGGAGCTGTTGGGGCAGGGGTGTAAATTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000536991.5
CDS-3UTR CCA 90 bp CCTCTTCTGTTACCCTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAGAAGCCACTGAGAAATaGACCAGTGAGCTGAGCTCA +
Preference number: 4 (lower is better)
Translates to: PLLLPSWFSLFTNYLHVPEATEK*TSELSS
Trigger: TGAGCTCAGCTCACTGGTCCATTTCTCAGTGGCTTC...TGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAGGGTAACAGAAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CCA 90 bp ATGCCCAAAGCTACTTGGCTAAACAGGCTGGTGACACCACACCCAAAAGGTGGCCCTCCCAAAACTAAGTaGAGGCTCTGTCTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: MPKATWLNRLVTPHPKGGPPKTK*RLCLFL
Trigger: GAGGAAAAGACAGAGCCTCCACTTAGTTTTGGGAGG...GCCACCTTTTGGGTGTGGTGTCACCAGCCTGTTTAGCCAAGTAGCTTTGGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CCA 90 bp AGGCTGAGAAGGCCACAGTGGTTCAGGTGCTTTGAGGACTTGGTCTTGGCTCAAATGCCCAAAGCTACTTaGCTAAACAGGCTGGTGACA +
Preference number: 4 (lower is better)
Translates to: RLRRPQWFRCFEDLVLAQMPKAT*LNRLVT
Trigger: TGTCACCAGCCTGTTTAGCCAAGTAGCTTTGGGCAT...TTGAGCCAAGACCAAGTCCTCAAAGCACCTGAACCACTGTGGCCTTCTCAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CCA 90 bp CTGTGTGTCCCTTTGTGGCCATGTAAGAGACCACACTGCTGTAGGCTGAGAAGGTCAATAGAGCCTCACTaGTGTTTGCTCAGATTGGGC +
Preference number: 4 (lower is better)
Translates to: LCVPLWPCKRPHCCRLRRSIEPH*CLLRLG
Trigger: GCCCAATCTGAGCAAACACCAGTGAGGCTCTATTGA...CCTTCTCAGCCTACAGCAGTGTGGTCTCTTACATGGCCACAAAGGGACACACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CCA 90 bp CCTCTTCTGTTACCCTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAGGTGCTTTGAGGACTTaGTCTTGGCTCAATAGAGCC +
Preference number: 4 (lower is better)
Translates to: PLLLPSWFSLFTNYLHVPGALRT*SWLNRA
Trigger: GGCTCTATTGAGCCAAGACCAAGTCCTCAAAGCACC...TGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAGGGTAACAGAAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGACTGGAGACAAGGATGTaGGCTTCTTGGGCCATGGAT +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRLETRM*ASWAMD
Trigger: ATCCATGGCCCAAGAAGCCCACATCCTTGTCTCCAG...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460649.5
CDS-3UTR CCA 90 bp GAGTTTGAGTCAGAGGCTTTATGTCCCCAAACCCAACCCCCTCTGAGTATTAAACCCTATCCCCCACTCTaGGTGCTGGAGACAAGGATG +
Preference number: 4 (lower is better)
Translates to: EFESEALCPQTQPPLSIKPYPPL*VLETRM
Trigger: CATCCTTGTCTCCAGCACCCAGAGTGGGGGATAGGG...TTTAATACTCAGAGGGGGTTGGGTTTGGGGACATAAAGCCTCTGACTCAAACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000460649.5
CDS-3UTR CCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGATCCCTACGTCCGAACTaGGGCACTTCTGCGTTTCTT +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRSLRPN*GTSAFL
Trigger: AAGAAACGCAGAAGTGCCCCAGTTCGGACGTAGGGA...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542506.5
CDS-3UTR CCA 90 bp GCCCGGCATGAGTGGAATTTTAGTGTTAAATCTCTTCCTGACTCTGGGTTCAGTCACCCAGCTTCCCAGTaGAAACTGGGGTTGGATGGG +
Preference number: 4 (lower is better)
Translates to: ARHEWNFSVKSLPDSGFSHPASQ*KLGLDG
Trigger: CCCATCCAACCCCAGTTTCCACTGGGAAGCTGGGTG...ACTGAACCCAGAGTCAGGAAGAGATTTAACACTAAAATTCCACTCATGCCGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS-3UTR CCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGACCTGGGCTCAAAGGATaGTCCCACCTCAGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRPGLKG*SHLSFL
Trigger: AAGGAAACTGAGGTGGGACCATCCTTTGAGCCCAGG...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS-3UTR CCA 90 bp CTCCTCTTCTGTTACCCTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCTTAAACTAGGGAGATaGGCTTGTGCCACCCCAATC +
Preference number: 4 (lower is better)
Translates to: LLFCYPPGSLCSPTTCMCLKLGR*ACATPI
Trigger: GATTGGGGTGGCACAAGCCCATCTCCCTAGTTTAAG...GCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAGGGTAACAGAAGAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536991.5
3UTR CAA 72 bp GGACTTGGTCTTGGCTCAATAGAGCCTCACTGGTGTTaGCTCAGATTGGGCAGCCTATGCCCAAAGCTACTT +
Preference number: 4 (lower is better)
Translates to: GLGLGSIEPHWC*LRLGSLCPKLL
Trigger: AAGTAGCTTTGGGCATAGGCTGCCCAATCTGAGCAAACACCAGTGAGGCTCTATTGAGCCAAGACCAAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR TCA 90 bp GCTTTGAGGACTTGGTCTTGGCTCAATAGAGCCTCACTGGTGTTTGCTCAGATTTCACAAGGCCCTTGTTaGTGTGGAAGGCCACAAAGG +
Preference number: 4 (lower is better)
Translates to: ALRTWSWLNRASLVFAQISQGPC*CGRPQR
Trigger: CCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGA...AATCTGAGCAAACACCAGTGAGGCTCTATTGAGCCAAGACCAAGTCCTCAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR TCA 90 bp CAAGGCAAAGAAGAAGGGATGCATGTTGATGTCTGGGTCTTTGCGGAAGCAGTTTCACAAGGCCCTTGTTaGTGTGGAAGGCCACAAAGG +
Preference number: 4 (lower is better)
Translates to: QGKEEGMHVDVWVFAEAVSQGPC*CGRPQR
Trigger: CCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGA...AACTGCTTCCGCAAAGACCCAGACATCAACATGCATCCCTTCTTCTTTGCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424501.5
CDS-3UTR TCA 90 bp TCTGTTACCCTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAAACTATCACAAGGCCCTTGTTaGTGTGGAAGGCCACAAAGG +
Preference number: 4 (lower is better)
Translates to: SVTLLVLSVHQLPACAKLSQGPC*CGRPQR
Trigger: CCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGA...TAGTTTGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAGGGTAACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000433932.5
CDS-3UTR TCA 90 bp CAAGGCAAAGAAGAAGGGATGCATGTTGATGTCTGGGTCTTTGCGGAAGCAGTTCAGATGGTTCCACTTTaGGGTGCTGAAGACCGACAG +
Preference number: 4 (lower is better)
Translates to: QGKEEGMHVDVWVFAEAVQMVPL*GAEDRQ
Trigger: CTGTCGGTCTTCAGCACCTCAAAGTGGAACCATCTG...AACTGCTTCCGCAAAGACCCAGACATCAACATGCATCCCTTCTTCTTTGCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424501.5
CDS-3UTR TCA 90 bp TCTGTTACCCTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAAACTACAGATGGTTCCACTTTaGGGTGCTGAAGACCGACAG +
Preference number: 4 (lower is better)
Translates to: SVTLLVLSVHQLPACAKLQMVPL*GAEDRQ
Trigger: CTGTCGGTCTTCAGCACCTCAAAGTGGAACCATCTG...TAGTTTGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAGGGTAACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000433932.5
CDS-3UTR TCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGAAGAAGGGATGCATGTTaGTGTCTGGGTCTTTGCGGA +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRRRDAC*CLGLCG
Trigger: TCCGCAAAGACCCAGACATCAACATGCATCCCTTCT...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000542506.5
CDS-3UTR TCA 90 bp AATAATTTACACCCCTGCCCCAACAGCTCCTTCCCTCCTAGGGACTTCTGTGTCATAGTGGCACATAAGTaGGGAAGAAGCGGACGTAGA +
Preference number: 4 (lower is better)
Translates to: NNLHPCPNSSFPPRDFCVIVAHK*GRSGRR
Trigger: TCTACGTCCGCTTCTTCCTCACTTATGTGCCACTAT...GACACAGAAGTCCCTAGGAGGGAAGGAGCTGTTGGGGCAGGGGTGTAAATTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000536991.5
CDS-3UTR TCA 90 bp ATAATTTACACCCCTGCCCCAACAGCTCCTTCCCTCCTAGGGACTTCTGTGTCCAAACCCAACCCCCTCTaGGTATTAAACTATAGTGGC +
Preference number: 4 (lower is better)
Translates to: IIYTPAPTAPSLLGTSVSKPNPL*VLNYSG
Trigger: GCCACTATAGTTTAATACTCAGAGGGGGTTGGGTTT...GGACACAGAAGTCCCTAGGAGGGAAGGAGCTGTTGGGGCAGGGGTGTAAATTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000536991.5
CDS-3UTR TCA 90 bp CTCCTCTTCTGTTACCCTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCTCCATGTCTTTGTGTTaGCAAACCTCTCCATGGGTG +
Preference number: 4 (lower is better)
Translates to: LLFCYPPGSLCSPTTCMCSMSLC*QTSPWV
Trigger: CACCCATGGAGAGGTTTGTCAACACAAAGACATGGA...GCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAGGGTAACAGAAGAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR GCA 90 bp AGGCTGAGAAGGCCACAGTGGTTCAGGTGCTTTGAGGACTTGGTCTTGGCTCAAGCAAAGAAGAAGGGATaGATGTTGATGTCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: RLRRPQWFRCFEDLVLAQAKKKG*MLMSGS
Trigger: AGACCCAGACATCAACATGCATCCCTTCTTCTTTGC...TTGAGCCAAGACCAAGTCCTCAAAGCACCTGAACCACTGTGGCCTTCTCAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR GCA 90 bp GAGTTTGAGTCAGAGGCTTTATGTCCCCAAACCCAACCCCCTCTGAGTATTAAACAGACTTGTGGACATTaGATGTGGCCTGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: EFESEALCPQTQPPLSIKQTCGH*MWPGAG
Trigger: CCCAGCTCCAGGCCACATGCAATGTCCACAAGTCTG...TTTAATACTCAGAGGGGGTTGGGTTTGGGGACATAAAGCCTCTGACTCAAACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000460649.5
ENST00000536991.5
CDS-3UTR GCA 90 bp GAGTTTGAGTCAGAGGCTTTATGTCCCCAAACCCAACCCCCTCTGAGTATTAAATTGGCACACAAGGACTaGACCAGGGGAGCCACTTTG +
Preference number: 4 (lower is better)
Translates to: EFESEALCPQTQPPLSIKLAHKD*TRGATL
Trigger: CAAAGTGGCTCCCCTGGTGCAGTCCTTGTGTGCCAA...TTTAATACTCAGAGGGGGTTGGGTTTGGGGACATAAAGCCTCTGACTCAAACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000460649.5
ENST00000536991.5
CDS-3UTR GCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGATGGTACTCTATGCCATaGTTGGCACACAAGGACTGC +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRWYSMP*LAHKDC
Trigger: GCAGTCCTTGTGTGCCAAGCATGGCATAGAGTACCA...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000460649.5
ENST00000536991.5
ENST00000542506.5
CDS-3UTR GCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGATGGACTGGTACTCTATaGCATGCTTGGCACACAAGG +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRWTGTL*HAWHTR
Trigger: CCTTGTGTGCCAAGCATGGCATAGAGTACCAGTCCA...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000460649.5
ENST00000536991.5
ENST00000542506.5
CDS-3UTR GCA 90 bp CTGTGTGTCCCTTTGTGGCCATGTAAGAGACCACACTGCTGTAGGCTGAGAAGGCTAACTTGTCCCATCTaGTCACTTGCTTATGGAGCT +
Preference number: 4 (lower is better)
Translates to: LCVPLWPCKRPHCCRLRRLTCPI*SLAYGA
Trigger: AGCTCCATAAGCAAGTGAGCAGATGGGACAAGTTAG...CCTTCTCAGCCTACAGCAGTGTGGTCTCTTACATGGCCACAAAGGGACACACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR GCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGACCACAGTGGTTCAGGTaGTTTGAGGACTTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRPQWFR*FEDLVL
Trigger: CAAGACCAAGTCCTCAAAGCACCTGAACCACTGTGG...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR GCA 90 bp CGTGCCACCACGCCCGGCATGAGTGGAATTTTAGTGTTAAATCTCTTCCTGACTTGTAAGAGACCACACTaGTGTAGGCTGAGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: RATTPGMSGILVLNLFLTCKRPH*CRLRRP
Trigger: TGGCCTTCTCAGCCTACAGCAGTGTGGTCTCTTACA...AGTCAGGAAGAGATTTAACACTAAAATTCCACTCATGCCGGGCGTGGTGGCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR GCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGACAGCAGCTCTTTGTTTaGATGGTGCAGCCATTCTCC +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRQQLFV*MVQPFS
Trigger: GGAGAATGGCTGCACCATGCAAACAAAGAGCTGCTG...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460649.5
CDS-3UTR GCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGAAGCTACTTTGGGTTGTaGAAGGTAAGGTCCATGGCG +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRSYFGL*KVRSMA
Trigger: CGCCATGGACCTTACCTTGCACAACCCAAAGTAGCT...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542506.5
CDS-3UTR GCA 90 bp GAGTTTGAGTCAGAGGCTTTATGTCCCCAAACCCAACCCCCTCTGAGTATTAAACTCTTCAGTGACAGGTaGTTGGGAACTCAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: EFESEALCPQTQPPLSIKLFSDR*LGTQAP
Trigger: TGGGGCCTGAGTTCCCAAGCACCTGTCACTGAAGAG...TTTAATACTCAGAGGGGGTTGGGTTTGGGGACATAAAGCCTCTGACTCAAACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS-3UTR GCA 90 bp GCCCGGCATGAGTGGAATTTTAGTGTTAAATCTCTTCCTGACTCTGGGTTCAGTTGTCTCCCCTCCAGGTaGTTGAGTGCTCTGCAATCC +
Preference number: 4 (lower is better)
Translates to: ARHEWNFSVKSLPDSGFSCLPSR*LSALQS
Trigger: GGATTGCAGAGCACTCAAGCACCTGGAGGGGAGACA...ACTGAACCCAGAGTCAGGAAGAGATTTAACACTAAAATTCCACTCATGCCGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS-3UTR CCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGAAAAGCTGGGCTGCTCTaGAGACAGTTCTCCAATCAG +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRKAGLL*RQFSNQ
Trigger: CTGATTGGAGAACTGTCTCCAGAGCAGCCCAGCTTT...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000542506.5
CDS-3UTR CCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGAGCTCTTTATTCTTGGTaGGCTCAAAGCTGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRALYSW*AQSWAA
Trigger: AGCAGCCCAGCTTTGAGCCCACCAAGAATAAAGAGC...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000542506.5
CDS-3UTR CCA 90 bp CCTCTTCTGTTACCCTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCATCAGCTCTTTATTCTTaGTGGGCTCAAAGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: PLLLPSWFSLFTNYLHVPSALYS*WAQSWA
Trigger: AGCCCAGCTTTGAGCCCACCAAGAATAAAGAGCTGA...TGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAGGGTAACAGAAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000433932.5
CDS-3UTR CCA 90 bp ATAGGAAGGATCAGCACCTATTTTGGAGTGAGGAAGCCAATGGAGGTACAACTCACATTGCATGTGGCCTaGAGCTGGGTGGAAACCCAG +
Preference number: 4 (lower is better)
Translates to: IGRISTYFGVRKPMEVQLTLHVA*SWVETQ
Trigger: CTGGGTTTCCACCCAGCTCCAGGCCACATGCAATGT...GAGTTGTACCTCCATTGGCTTCCTCACTCCAAAATAGGTGCTGATCCTTCCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CCA 90 bp CTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAAACTAGAAAAAGGAACATTGCATGTGGCCTaGAGCTGGGTGGAAACCCAG +
Preference number: 4 (lower is better)
Translates to: LLVLSVHQLPACAKLEKGTLHVA*SWVETQ
Trigger: CTGGGTTTCCACCCAGCTCCAGGCCACATGCAATGT...TCCTTTTTCTAGTTTGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000536991.5
CDS-3UTR CCA 90 bp GAGTTTGAGTCAGAGGCTTTATGTCCCCAAACCCAACCCCCTCTGAGTATTAAAACATTGCATGTGGCCTaGAGCTGGGTGGAAACCCAG +
Preference number: 4 (lower is better)
Translates to: EFESEALCPQTQPPLSIKTLHVA*SWVETQ
Trigger: CTGGGTTTCCACCCAGCTCCAGGCCACATGCAATGT...TTTAATACTCAGAGGGGGTTGGGTTTGGGGACATAAAGCCTCTGACTCAAACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000460649.5
ENST00000536991.5
CDS-3UTR CCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGAGACTCCTTTAGTGAGTaGATGATGTCGGCGAAGGCT +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRDSFSE*MMSAKA
Trigger: AGCCTTCGCCGACATCATCCACTCACTAAAGGAGTC...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000460649.5
ENST00000536991.5
ENST00000542506.5
CDS-3UTR CCA 90 bp CGTGCCACCACGCCCGGCATGAGTGGAATTTTAGTGTTAAATCTCTTCCTGACTGACTCCTTTAGTGAGTaGATGATGTCGGCGAAGGCT +
Preference number: 4 (lower is better)
Translates to: RATTPGMSGILVLNLFLTDSFSE*MMSAKA
Trigger: AGCCTTCGCCGACATCATCCACTCACTAAAGGAGTC...AGTCAGGAAGAGATTTAACACTAAAATTCCACTCATGCCGGGCGTGGTGGCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000536991.5
CDS-3UTR CCA 90 bp TGCCACCACGCCCGGCATGAGTGGAATTTTAGTGTTAAATCTCTTCCTGACTCTCCTCTTCTTCCAGACTaGGCAGGGTGGCTGTTGTTA +
Preference number: 4 (lower is better)
Translates to: CHHARHEWNFSVKSLPDSPLLPD*AGWLLL
Trigger: TAACAACAGCCACCCTGCCCAGTCTGGAAGAAGAGG...AGAGTCAGGAAGAGATTTAACACTAAAATTCCACTCATGCCGGGCGTGGTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000536991.5
CDS-3UTR CCA 90 bp CCTCTTCTGTTACCCTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCACTTCTGTTACCCTCCTaGTTCTCTCTGTTCACCAAC +
Preference number: 4 (lower is better)
Translates to: PLLLPSWFSLFTNYLHVPLLLPS*FSLFTN
Trigger: GTTGGTGAACAGAGAGAACCAGGAGGGTAACAGAAG...TGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAGGGTAACAGAAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000536991.5
CDS-3UTR CCA 90 bp GAGTTTGAGTCAGAGGCTTTATGTCCCCAAACCCAACCCCCTCTGAGTATTAAAAATCTGCCAGGACCATaGCTCAGTCCATGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: EFESEALCPQTQPPLSIKNLPGP*LSPCQC
Trigger: GCACTGGCATGGACTGAGCCATGGTCCTGGCAGATT...TTTAATACTCAGAGGGGGTTGGGTTTGGGGACATAAAGCCTCTGACTCAAACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000460649.5
CDS-3UTR CCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGACCAAGGCAGCTACTTTaGGTTGTGCAAGGTAAGGTC +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRPRQLL*VVQGKV
Trigger: GACCTTACCTTGCACAACCCAAAGTAGCTGCCTTGG...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542506.5
CDS-3UTR CCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGATTCGCTCAGCTGAGATaGCAAACTGCTGTCATGCAG +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRFAQLR*QTAVMQ
Trigger: CTGCATGACAGCAGTTTGCCATCTCAGCTGAGCGAA...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS-3UTR CCA 90 bp GAGTTTGAGTCAGAGGCTTTATGTCCCCAAACCCAACCCCCTCTGAGTATTAAACTCTGGGGGTTGGACTaGGCTCTACCAGGTTACCTT +
Preference number: 4 (lower is better)
Translates to: EFESEALCPQTQPPLSIKLWGLD*ALPGYL
Trigger: AAGGTAACCTGGTAGAGCCCAGTCCAACCCCCAGAG...TTTAATACTCAGAGGGGGTTGGGTTTGGGGACATAAAGCCTCTGACTCAAACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS-3UTR CCA 90 bp GCCCGGCATGAGTGGAATTTTAGTGTTAAATCTCTTCCTGACTCTGGGTTCAGTTGTTCCTCTGGGGGTTaGACTGGGCTCTACCAGGTT +
Preference number: 4 (lower is better)
Translates to: ARHEWNFSVKSLPDSGFSCSSGG*TGLYQV
Trigger: AACCTGGTAGAGCCCAGTCCAACCCCCAGAGGAACA...ACTGAACCCAGAGTCAGGAAGAGATTTAACACTAAAATTCCACTCATGCCGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536991.5
3UTR CAA 72 bp TGTAACATTCCGAGCCTTTTGTCACTGTGTGTCCCTTaGTGGCCATGTAAGAGACCACACTGCTGTAGGCTG +
Preference number: 4 (lower is better)
Translates to: CNIPSLLSLCVP*WPCKRPHCCRL
Trigger: CAGCCTACAGCAGTGTGGTCTCTTACATGGCCACAAAGGGACACACAGTGACAAAAGGCTCGGAATGTTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR TCA 90 bp AATAATTTACACCCCTGCCCCAACAGCTCCTTCCCTCCTAGGGACTTCTGTGTCTGGCCAATCACAAAATaGTGTAGCAGATGGTTCCAC +
Preference number: 4 (lower is better)
Translates to: NNLHPCPNSSFPPRDFCVWPITK*CSRWFH
Trigger: GTGGAACCATCTGCTACATCATTTTGTGATTGGCCA...GACACAGAAGTCCCTAGGAGGGAAGGAGCTGTTGGGGCAGGGGTGTAAATTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000433932.5
CDS-3UTR TCA 90 bp TGCCACCACGCCCGGCATGAGTGGAATTTTAGTGTTAAATCTCTTCCTGACTCTAGAAGGGATGCATGTTaGTGTCTGGGTCTTTGCGGA +
Preference number: 4 (lower is better)
Translates to: CHHARHEWNFSVKSLPDSRRDAC*CLGLCG
Trigger: TCCGCAAAGACCCAGACATCAACATGCATCCCTTCT...AGAGTCAGGAAGAGATTTAACACTAAAATTCCACTCATGCCGGGCGTGGTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR TCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGAATAGTGGCACATAAGTaGGGAAGAAGCGGACGTAGA +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRIVAHK*GRSGRR
Trigger: TCTACGTCCGCTTCTTCCTCACTTATGTGCCACTAT...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000460649.5
ENST00000536991.5
ENST00000542506.5
CDS-3UTR TCA 90 bp ATAGGAAGGATCAGCACCTATTTTGGAGTGAGGAAGCCAATGGAGGTACAACTCCCTTTAGTGAGTGGATaGTGTCGGCGAAGGCTGACA +
Preference number: 4 (lower is better)
Translates to: IGRISTYFGVRKPMEVQLPLVSG*CRRRLT
Trigger: TGTCAGCCTTCGCCGACATCATCCACTCACTAAAGG...GAGTTGTACCTCCATTGGCTTCCTCACTCCAAAATAGGTGCTGATCCTTCCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR TCA 90 bp CTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAAACTAGAAAAAGGACCTTTAGTGAGTGGATaGTGTCGGCGAAGGCTGACA +
Preference number: 4 (lower is better)
Translates to: LLVLSVHQLPACAKLEKGPLVSG*CRRRLT
Trigger: TGTCAGCCTTCGCCGACATCATCCACTCACTAAAGG...TCCTTTTTCTAGTTTGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000536991.5
CDS-3UTR TCA 90 bp CTCCTCTTCTGTTACCCTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCAAACCCAACCCCCTCTaGGTATTAAACTATAGTGGC +
Preference number: 4 (lower is better)
Translates to: LLFCYPPGSLCSPTTCMCKPNPL*VLNYSG
Trigger: GCCACTATAGTTTAATACTCAGAGGGGGTTGGGTTT...GCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAGGGTAACAGAAGAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000536991.5
CDS-3UTR TCA 90 bp CTCCTCTTCTGTTACCCTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCAATGGACCAGTGAGCTaGGCTCACCTTTTATATGAG +
Preference number: 4 (lower is better)
Translates to: LLFCYPPGSLCSPTTCMCNGPVS*AHLLYE
Trigger: CTCATATAAAAGGTGAGCTCAGCTCACTGGTCCATT...GCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAGGGTAACAGAAGAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR TCA 90 bp GAGTTTGAGTCAGAGGCTTTATGTCCCCAAACCCAACCCCCTCTGAGTATTAAATGCCCTGCCTGCTTCTaGAACTGGAGAATGGCATCT +
Preference number: 4 (lower is better)
Translates to: EFESEALCPQTQPPLSIKCPACF*NWRMAS
Trigger: AGATGCCATTCTCCAGTTTCAGAAGCAGGCAGGGCA...TTTAATACTCAGAGGGGGTTGGGTTTGGGGACATAAAGCCTCTGACTCAAACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR TCA 90 bp AATAATTTACACCCCTGCCCCAACAGCTCCTTCCCTCCTAGGGACTTCTGTGTCATGGCTCCTCCATCTTaGTGTGCCATGGATTCTAAA +
Preference number: 4 (lower is better)
Translates to: NNLHPCPNSSFPPRDFCVMAPPS*CAMDSK
Trigger: TTTAGAATCCATGGCACATCAAGATGGAGGAGCCAT...GACACAGAAGTCCCTAGGAGGGAAGGAGCTGTTGGGGCAGGGGTGTAAATTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS-3UTR GCA 90 bp CCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAAACTAGAAAAAGGAAAAAGGGTGAGCCAGGCTaGACCATCCAGCAGCAAGAT +
Preference number: 4 (lower is better)
Translates to: PGSLCSPTTCMCQTRKRKKGEPG*TIQQQD
Trigger: ATCTTGCTGCTGGATGGTGCAGCCTGGCTCACCCTT...TTTCCTTTTTCTAGTTTGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000433932.5
CDS-3UTR GCA 90 bp CCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAAACTAGAAAAAGGAAACTGAAGACCGACAGGTaGCCAAAGTCATGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PGSLCSPTTCMCQTRKRKLKTDR*PKSCCS
Trigger: GCTGCAGCATGACTTTGGGCACCTGTCGGTCTTCAG...TTTCCTTTTTCTAGTTTGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000433932.5
CDS-3UTR GCA 90 bp CCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAAACTAGAAAAAGGAAATTGGCACACAAGGACTaGACCAGGGGAGCCACTTTG +
Preference number: 4 (lower is better)
Translates to: PGSLCSPTTCMCQTRKRKLAHKD*TRGATL
Trigger: CAAAGTGGCTCCCCTGGTGCAGTCCTTGTGTGCCAA...TTTCCTTTTTCTAGTTTGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000536991.5
CDS-3UTR GCA 90 bp GAGTTTGAGTCAGAGGCTTTATGTCCCCAAACCCAACCCCCTCTGAGTATTAAAGCATCTAGCCAGAGCTaGCCTGACTCCTTTAGTGAG +
Preference number: 4 (lower is better)
Translates to: EFESEALCPQTQPPLSIKASSQS*PDSFSE
Trigger: CTCACTAAAGGAGTCAGGGCAGCTCTGGCTAGATGC...TTTAATACTCAGAGGGGGTTGGGTTTGGGGACATAAAGCCTCTGACTCAAACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000460649.5
ENST00000536991.5
CDS-3UTR GCA 90 bp CATGAGTGGAATTTTAGTGTTAAATCTCTTCCTGACTCTGGGTTCAGTAGGTCCCCTCAAGCTCCCCTCTaGCTTGGCTCCAGAGTCTTC +
Preference number: 4 (lower is better)
Translates to: HEWNFSVKSLPDSGFSRSPQAPL*LGSRVF
Trigger: GAAGACTCTGGAGCCAAGGCAGAGGGGAGCTTGAGG...GGACCTACTGAACCCAGAGTCAGGAAGAGATTTAACACTAAAATTCCACTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000536991.5
CDS-3UTR GCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGAAATAATTTACACCCCTaGCCCAACAGCTCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRNNLHP*PNSSFP
Trigger: AGGGAAGGAGCTGTTGGGGCAGGGGTGTAAATTATT...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000536991.5
CDS-3UTR GCA 90 bp TCTGTTACCCTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAAACTAAGCCTCACTGGTGTTTaGTCAGATTGGGCAGCCTAT +
Preference number: 4 (lower is better)
Translates to: SVTLLVLSVHQLPACAKLSLTGV*SDWAAY
Trigger: ATAGGCTGCCCAATCTGAGCAAACACCAGTGAGGCT...TAGTTTGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAGGGTAACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR GCA 90 bp GAGTTTGAGTCAGAGGCTTTATGTCCCCAAACCCAACCCCCTCTGAGTATTAAAAGCCCCCTGGCATTATaGCCAGTACAAGAACCTCTG +
Preference number: 4 (lower is better)
Translates to: EFESEALCPQTQPPLSIKSPLAL*PVQEPL
Trigger: CAGAGGTTCTTGTACTGGGCATAATGCCAGGGGGCT...TTTAATACTCAGAGGGGGTTGGGTTTGGGGACATAAAGCCTCTGACTCAAACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000460649.5
CDS-3UTR GCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGACTCAGTCCATGCCAGTaGCCTGATCAAATCTCTCAT +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRLSPCQ*PDQISH
Trigger: ATGAGAGATTTGATCAGGGCACTGGCATGGACTGAG...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460649.5
CDS-3UTR GCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGAACTTCCGTCCCTTCTTaGGGGTCTTTCAATAAGTCC +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRTSVPS*GSFNKS
Trigger: GGACTTATTGAAAGACCCGCAAGAAGGGACGGAAGT...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542506.5
CDS-3UTR GCA 90 bp CCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAAACTAGAAAAAGGAAACCCACGCATGGGACTTaGTCTGCTCCCACACCTTTA +
Preference number: 4 (lower is better)
Translates to: PGSLCSPTTCMCQTRKRKPTHGT*SAPTPL
Trigger: TAAAGGTGTGGGAGCAGAGCAAGTCCCATGCGTGGG...TTTCCTTTTTCTAGTTTGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS-3UTR GCA 90 bp GAGTTTGAGTCAGAGGCTTTATGTCCCCAAACCCAACCCCCTCTGAGTATTAAACTCCAGGTGCTTGAGTaGTCTGCAATCCACTGGAAC +
Preference number: 4 (lower is better)
Translates to: EFESEALCPQTQPPLSIKLQVLE*SAIHWN
Trigger: GTTCCAGTGGATTGCAGAGCACTCAAGCACCTGGAG...TTTAATACTCAGAGGGGGTTGGGTTTGGGGACATAAAGCCTCTGACTCAAACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS-3UTR CCA 90 bp CCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAAACTAGAAAAAGGAAATGGTGGGCTCAAAGCTaGGCTGCTCTGGAGACAGTT +
Preference number: 4 (lower is better)
Translates to: PGSLCSPTTCMCQTRKRKWWAQS*AALETV
Trigger: AACTGTCTCCAGAGCAGCCCAGCTTTGAGCCCACCA...TTTCCTTTTTCTAGTTTGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000433932.5
CDS-3UTR CCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGATCAGCTCTTTATTCTTaGTGGGCTCAAAGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRSALYS*WAQSWA
Trigger: AGCCCAGCTTTGAGCCCACCAAGAATAAAGAGCTGA...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000542506.5
CDS-3UTR CCA 90 bp CCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAAACTAGAAAAAGGAAAGGCTTGGCATGGTGCTaGAAGTGCATGTGGTTCCAC +
Preference number: 4 (lower is better)
Translates to: PGSLCSPTTCMCQTRKRKGLAWC*KCMWFH
Trigger: GTGGAACCACATGCACTTCCAGCACCATGCCAAGCC...TTTCCTTTTTCTAGTTTGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000433932.5
CDS-3UTR CCA 90 bp GTGTTTGCTCAGATTGGGCAGCCTATGCCCAAAGCTACTTGGCTAAACAGGCTGATGTGCATGGGAATATaGTTCATCTGTGTCACCCAC +
Preference number: 4 (lower is better)
Translates to: VFAQIGQPMPKATWLNRLMCMGI*FICVTH
Trigger: GTGGGTGACACAGATGAACCATATTCCCATGCACAT...CAGCCTGTTTAGCCAAGTAGCTTTGGGCATAGGCTGCCCAATCTGAGCAAACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CCA 90 bp ACCCAGGCTGTTTTAAACCTAGTTCTCCAGCTAAGTAAAATGTGCCCAAATGGACATGTGGCCTGGAGCTaGGTGGAAACCCAGTCCATG +
Preference number: 4 (lower is better)
Translates to: TQAVLNLVLQLSKMCPNGHVAWS*VETQSM
Trigger: CATGGACTGGGTTTCCACCCAGCTCCAGGCCACATG...TCCATTTGGGCACATTTTACTTAGCTGGAGAACTAGGTTTAAAACAGCCTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGATGTGTCGAGGCATCGTaGGAAAAAGATGGTGCTCAA +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRCVEAS*EKDGAQ
Trigger: TTGAGCACCATCTTTTTCCCACGATGCCTCGACACA...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000460649.5
ENST00000536991.5
ENST00000542506.5
CDS-3UTR CCA 90 bp CGTGCCACCACGCCCGGCATGAGTGGAATTTTAGTGTTAAATCTCTTCCTGACTTGTGTCGAGGCATCGTaGGAAAAAGATGGTGCTCAA +
Preference number: 4 (lower is better)
Translates to: RATTPGMSGILVLNLFLTCVEAS*EKDGAQ
Trigger: TTGAGCACCATCTTTTTCCCACGATGCCTCGACACA...AGTCAGGAAGAGATTTAACACTAAAATTCCACTCATGCCGGGCGTGGTGGCACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000536991.5
CDS-3UTR CCA 90 bp GAGTTTGAGTCAGAGGCTTTATGTCCCCAAACCCAACCCCCTCTGAGTATTAAAAGCAGGGGCTTGGACTaGTACTCTATGCCATGCTTG +
Preference number: 4 (lower is better)
Translates to: EFESEALCPQTQPPLSIKSRGLD*YSMPCL
Trigger: CAAGCATGGCATAGAGTACCAGTCCAAGCCCCTGCT...TTTAATACTCAGAGGGGGTTGGGTTTGGGGACATAAAGCCTCTGACTCAAACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000460649.5
ENST00000536991.5
CDS-3UTR CCA 90 bp GAGTTTGAGTCAGAGGCTTTATGTCCCCAAACCCAACCCCCTCTGAGTATTAAACTGACAGCAGGGGCTTaGACTGGTACTCTATGCCAT +
Preference number: 4 (lower is better)
Translates to: EFESEALCPQTQPPLSIKLTAGA*TGTLCH
Trigger: ATGGCATAGAGTACCAGTCCAAGCCCCTGCTGTCAG...TTTAATACTCAGAGGGGGTTGGGTTTGGGGACATAAAGCCTCTGACTCAAACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000460649.5
ENST00000536991.5
CDS-3UTR CCA 90 bp CTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAAACTAGAAAAAGGACCAGACTGGGCAGGGTaGCTGTTGTTATTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: LLVLSVHQLPACAKLEKGPDWAG*LLLLVK
Trigger: CTTCACCAATAACAACAGCCACCCTGCCCAGTCTGG...TCCTTTTTCTAGTTTGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000536991.5
CDS-3UTR CCA 90 bp CTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAAACTAGAAAAAGGACCTCTTCTTCCAGACTaGGCAGGGTGGCTGTTGTTA +
Preference number: 4 (lower is better)
Translates to: LLVLSVHQLPACAKLEKGPLLPD*AGWLLL
Trigger: TAACAACAGCCACCCTGCCCAGTCTGGAAGAAGAGG...TCCTTTTTCTAGTTTGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000536991.5
CDS-3UTR CCA 90 bp GCCCGGCATGAGTGGAATTTTAGTGTTAAATCTCTTCCTGACTCTGGGTTCAGTCAGGCTGGAGTACAATaGCGTGATCTCAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: ARHEWNFSVKSLPDSGFSQAGVQ*RDLSSL
Trigger: CAGTGAGCTGAGATCACGCCATTGTACTCCAGCCTG...ACTGAACCCAGAGTCAGGAAGAGATTTAACACTAAAATTCCACTCATGCCGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CCA 90 bp TTTGGAGTGAGGAAGCCAATGGAGGTACAACTCCTCAATTCTAAGTTTTTGTTGTGGAAGCAAAGGCTGTaGGTTGGAGGGGGAAGCGGG +
Preference number: 4 (lower is better)
Translates to: FGVRKPMEVQLLNSKFLLWKQRL*VGGGSG
Trigger: CCCGCTTCCCCCTCCAACCCACAGCCTTTGCTTCCA...CAACAAAAACTTAGAATTGAGGAGTTGTACCTCCATTGGCTTCCTCACTCCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CCA 90 bp CTCCTCTTCTGTTACCCTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCGATCAGCACCTATTTTaGAGTGAGGAAGCCAATGGA +
Preference number: 4 (lower is better)
Translates to: LLFCYPPGSLCSPTTCMCDQHLF*SEEANG
Trigger: TCCATTGGCTTCCTCACTCCAAAATAGGTGCTGATC...GCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAGGGTAACAGAAGAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CCA 90 bp GCCCGGCATGAGTGGAATTTTAGTGTTAAATCTCTTCCTGACTCTGGGTTCAGTCTGAGAAGGCCACAGTaGTTCAGGTGCTTTGAGGAC +
Preference number: 4 (lower is better)
Translates to: ARHEWNFSVKSLPDSGFSLRRPQ*FRCFED
Trigger: GTCCTCAAAGCACCTGAACCACTGTGGCCTTCTCAG...ACTGAACCCAGAGTCAGGAAGAGATTTAACACTAAAATTCCACTCATGCCGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CCA 90 bp CAAGGCAAAGAAGAAGGGATGCATGTTGATGTCTGGGTCTTTGCGGAAGCAGTTATGATCTGCCCATCTTaGCCTCCCAAGGTACTGGTA +
Preference number: 4 (lower is better)
Translates to: QGKEEGMHVDVWVFAEAVMICPS*PPKVLV
Trigger: TACCAGTACCTTGGGAGGCCAAGATGGGCAGATCAT...AACTGCTTCCGCAAAGACCCAGACATCAACATGCATCCCTTCTTCTTTGCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424501.5
CDS-3UTR CCA 90 bp AATAATTTACACCCCTGCCCCAACAGCTCCTTCCCTCCTAGGGACTTCTGTGTCGAAACTGGGGTTGGATaGGAAGAACTAGTTTGCCTT +
Preference number: 4 (lower is better)
Translates to: NNLHPCPNSSFPPRDFCVETGVG*EELVCL
Trigger: AAGGCAAACTAGTTCTTCCCATCCAACCCCAGTTTC...GACACAGAAGTCCCTAGGAGGGAAGGAGCTGTTGGGGCAGGGGTGTAAATTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS-3UTR CCA 90 bp CTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAAACTAGAAAAAGGAGTACCTTTGTTCCTCTaGGGGTTGGACTGGGCTCTA +
Preference number: 4 (lower is better)
Translates to: LLVLSVHQLPACAKLEKGVPLFL*GLDWAL
Trigger: TAGAGCCCAGTCCAACCCCCAGAGGAACAAAGGTAC...TCCTTTTTCTAGTTTGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS-3UTR CCA 90 bp CATGAGTGGAATTTTAGTGTTAAATCTCTTCCTGACTCTGGGTTCAGTAGGTCCTCAGTGACAGGTGCTTaGGAACTCAGGCCCCACGCA +
Preference number: 4 (lower is better)
Translates to: HEWNFSVKSLPDSGFSRSSVTGA*ELRPHA
Trigger: TGCGTGGGGCCTGAGTTCCCAAGCACCTGTCACTGA...GGACCTACTGAACCCAGAGTCAGGAAGAGATTTAACACTAAAATTCCACTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS-3UTR TCA 90 bp GGCATGAGTGGAATTTTAGTGTTAAATCTCTTCCTGACTCTGGGTTCAGTAGGTTCCACTTTGAGGTGCTaGAGACCGACAGGTGCCCAA +
Preference number: 4 (lower is better)
Translates to: GMSGILVLNLFLTLGSVGSTLRC*RPTGAQ
Trigger: TTGGGCACCTGTCGGTCTTCAGCACCTCAAAGTGGA...ACCTACTGAACCCAGAGTCAGGAAGAGATTTAACACTAAAATTCCACTCATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR TCA 90 bp CCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAAACTAGAAAAAGGAAACAGATGGTTCCACTTTaGGGTGCTGAAGACCGACAG +
Preference number: 4 (lower is better)
Translates to: PGSLCSPTTCMCQTRKRKQMVPL*GAEDRQ
Trigger: CTGTCGGTCTTCAGCACCTCAAAGTGGAACCATCTG...TTTCCTTTTTCTAGTTTGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000433932.5
CDS-3UTR TCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGATGGCCAATCACAAAATaGTGTAGCAGATGGTTCCAC +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRWPITK*CSRWFH
Trigger: GTGGAACCATCTGCTACATCATTTTGTGATTGGCCA...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000542506.5
CDS-3UTR TCA 90 bp TGCCACCACGCCCGGCATGAGTGGAATTTTAGTGTTAAATCTCTTCCTGACTCTATAGTGGCACATAAGTaGGGAAGAAGCGGACGTAGA +
Preference number: 4 (lower is better)
Translates to: CHHARHEWNFSVKSLPDSIVAHK*GRSGRR
Trigger: TCTACGTCCGCTTCTTCCTCACTTATGTGCCACTAT...AGAGTCAGGAAGAGATTTAACACTAAAATTCCACTCATGCCGGGCGTGGTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000536991.5
CDS-3UTR TCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGATCCATGTTCCGGTCATaGTCAATGTGCATGGGAATA +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRSMFRS*SMCMGI
Trigger: TATTCCCATGCACATTGATCATGACCGGAACATGGA...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000460649.5
ENST00000536991.5
ENST00000542506.5
CDS-3UTR TCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGAAAACCCAACCCCCTCTaGGTATTAAACTATAGTGGC +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRKPNPL*VLNYSG
Trigger: GCCACTATAGTTTAATACTCAGAGGGGGTTGGGTTT...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000460649.5
ENST00000536991.5
CDS-3UTR TCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGAGAGACACTGACCGCATaGAATTACACATTGGGAATC +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRETLTA*NYTLGI
Trigger: GATTCCCAATGTGTAATTTCATGCGGTCAGTGTCTC...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460649.5
CDS-3UTR TCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGAAACCTCTGGAGACACTaGCCGCATGAAATTACACAT +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRNLWRH*PHEITH
Trigger: ATGTGTAATTTCATGCGGTCAGTGTCTCCAGAGGTT...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460649.5
CDS-3UTR TCA 90 bp GCCCGGCATGAGTGGAATTTTAGTGTTAAATCTCTTCCTGACTCTGGGTTCAGTTTCACTTCGCTCAGCTaGGATGGCAAACTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: ARHEWNFSVKSLPDSGFSFTSLS*DGKLLS
Trigger: TGACAGCAGTTTGCCATCTCAGCTGAGCGAAGTGAA...ACTGAACCCAGAGTCAGGAAGAGATTTAACACTAAAATTCCACTCATGCCGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS-3UTR GCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGAGCAAAGAAGAAGGGATaGATGTTGATGTCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRAKKKG*MLMSGS
Trigger: AGACCCAGACATCAACATGCATCCCTTCTTCTTTGC...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000542506.5
CDS-3UTR GCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGAGTGGGAAAAAGATGGTaGTCAATCTGGAAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRVGKRW*SIWKLR
Trigger: CCTCAACTTCCAGATTGAGCACCATCTTTTTCCCAC...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000460649.5
ENST00000536991.5
ENST00000542506.5
CDS-3UTR GCA 90 bp CATGAGTGGAATTTTAGTGTTAAATCTCTTCCTGACTCTGGGTTCAGTAGGTCCTTGGCACACAAGGACTaGACCAGGGGAGCCACTTTG +
Preference number: 4 (lower is better)
Translates to: HEWNFSVKSLPDSGFSRSLAHKD*TRGATL
Trigger: CAAAGTGGCTCCCCTGGTGCAGTCCTTGTGTGCCAA...GGACCTACTGAACCCAGAGTCAGGAAGAGATTTAACACTAAAATTCCACTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000536991.5
CDS-3UTR GCA 90 bp GAGTTTGAGTCAGAGGCTTTATGTCCCCAAACCCAACCCCCTCTGAGTATTAAATGGACTGGTACTCTATaGCATGCTTGGCACACAAGG +
Preference number: 4 (lower is better)
Translates to: EFESEALCPQTQPPLSIKWTGTL*HAWHTR
Trigger: CCTTGTGTGCCAAGCATGGCATAGAGTACCAGTCCA...TTTAATACTCAGAGGGGGTTGGGTTTGGGGACATAAAGCCTCTGACTCAAACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000460649.5
ENST00000536991.5
CDS-3UTR GCA 90 bp CTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAAACTAGAAAAAGGATGGACTGGTACTCTATaGCATGCTTGGCACACAAGG +
Preference number: 4 (lower is better)
Translates to: LLVLSVHQLPACAKLEKGWTGTL*HAWHTR
Trigger: CCTTGTGTGCCAAGCATGGCATAGAGTACCAGTCCA...TCCTTTTTCTAGTTTGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000536991.5
CDS-3UTR GCA 90 bp CCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAAACTAGAAAAAGGAAAGCATCTAGCCAGAGCTaGCCTGACTCCTTTAGTGAG +
Preference number: 4 (lower is better)
Translates to: PGSLCSPTTCMCQTRKRKASSQS*PDSFSE
Trigger: CTCACTAAAGGAGTCAGGGCAGCTCTGGCTAGATGC...TTTCCTTTTTCTAGTTTGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000536991.5
CDS-3UTR GCA 90 bp ATGCCCAAAGCTACTTGGCTAAACAGGCTGGTGACACCACACCCAAAAGGTGGCCCAACTACCTGCATGTaGCAAACTAGAAAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: MPKATWLNRLVTPHPKGGPTTCM*QTRKRK
Trigger: TTTCCTTTTTCTAGTTTGGCACATGCAGGTAGTTGG...GCCACCTTTTGGGTGTGGTGTCACCAGCCTGTTTAGCCAAGTAGCTTTGGGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CCA 90 bp GCCCGGCATGAGTGGAATTTTAGTGTTAAATCTCTTCCTGACTCTGGGTTCAGTGCTCTTTATTCTTGGTaGGCTCAAAGCTGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: ARHEWNFSVKSLPDSGFSALYSW*AQSWAA
Trigger: AGCAGCCCAGCTTTGAGCCCACCAAGAATAAAGAGC...ACTGAACCCAGAGTCAGGAAGAGATTTAACACTAAAATTCCACTCATGCCGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CCA 90 bp GAGTTTGAGTCAGAGGCTTTATGTCCCCAAACCCAACCCCCTCTGAGTATTAAAGCTCTTTATTCTTGGTaGGCTCAAAGCTGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: EFESEALCPQTQPPLSIKALYSW*AQSWAA
Trigger: AGCAGCCCAGCTTTGAGCCCACCAAGAATAAAGAGC...TTTAATACTCAGAGGGGGTTGGGTTTGGGGACATAAAGCCTCTGACTCAAACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000433932.5
CDS-3UTR CCA 90 bp CAAGGCAAAGAAGAAGGGATGCATGTTGATGTCTGGGTCTTTGCGGAAGCAGTTTCAGCTCTTTATTCTTaGTGGGCTCAAAGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: QGKEEGMHVDVWVFAEAVSALYS*WAQSWA
Trigger: AGCCCAGCTTTGAGCCCACCAAGAATAAAGAGCTGA...AACTGCTTCCGCAAAGACCCAGACATCAACATGCATCCCTTCTTCTTTGCCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424501.5
CDS-3UTR CCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGAATGCATGTTGATGTCTaGGTCTTTGCGGAAGCAGTT +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRMHVDV*VFAEAV
Trigger: AACTGCTTCCGCAAAGACCCAGACATCAACATGCAT...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000542506.5
CDS-3UTR CCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGAATGTGCATGGGAATATaGTTCATCTGTGTCACCCAC +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRMCMGI*FICVTH
Trigger: GTGGGTGACACAGATGAACCATATTCCCATGCACAT...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000460649.5
ENST00000536991.5
ENST00000542506.5
CDS-3UTR CCA 90 bp ATAATTTACACCCCTGCCCCAACAGCTCCTTCCCTCCTAGGGACTTCTGTGTCCCATGATCAATGTGCATaGGAATATGGTTCATCTGTG +
Preference number: 4 (lower is better)
Translates to: IIYTPAPTAPSLLGTSVSHDQCA*EYGSSV
Trigger: CACAGATGAACCATATTCCCATGCACATTGATCATG...GGACACAGAAGTCCCTAGGAGGGAAGGAGCTGTTGGGGCAGGGGTGTAAATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000536991.5
CDS-3UTR CCA 90 bp CATGAGTGGAATTTTAGTGTTAAATCTCTTCCTGACTCTGGGTTCAGTAGGTCCACATTGCATGTGGCCTaGAGCTGGGTGGAAACCCAG +
Preference number: 4 (lower is better)
Translates to: HEWNFSVKSLPDSGFSRSTLHVA*SWVETQ
Trigger: CTGGGTTTCCACCCAGCTCCAGGCCACATGCAATGT...GGACCTACTGAACCCAGAGTCAGGAAGAGATTTAACACTAAAATTCCACTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000536991.5
CDS-3UTR CCA 90 bp AATAATTTACACCCCTGCCCCAACAGCTCCTTCCCTCCTAGGGACTTCTGTGTCATCGTGGGAAAAAGATaGTGCTCAATCTGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: NNLHPCPNSSFPPRDFCVIVGKR*CSIWKL
Trigger: CAACTTCCAGATTGAGCACCATCTTTTTCCCACGAT...GACACAGAAGTCCCTAGGAGGGAAGGAGCTGTTGGGGCAGGGGTGTAAATTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000536991.5
CDS-3UTR CCA 90 bp TCTGTTACCCTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAAACTATGTGTCGAGGCATCGTaGGAAAAAGATGGTGCTCAA +
Preference number: 4 (lower is better)
Translates to: SVTLLVLSVHQLPACAKLCVEAS*EKDGAQ
Trigger: TTGAGCACCATCTTTTTCCCACGATGCCTCGACACA...TAGTTTGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAGGGTAACAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000536991.5
CDS-3UTR CCA 90 bp CCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAAACTAGAAAAAGGAAAAGCAGGGGCTTGGACTaGTACTCTATGCCATGCTTG +
Preference number: 4 (lower is better)
Translates to: PGSLCSPTTCMCQTRKRKSRGLD*YSMPCL
Trigger: CAAGCATGGCATAGAGTACCAGTCCAAGCCCCTGCT...TTTCCTTTTTCTAGTTTGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000536991.5
CDS-3UTR CCA 90 bp ATAGGAAGGATCAGCACCTATTTTGGAGTGAGGAAGCCAATGGAGGTACAACTCGACTCCTTTAGTGAGTaGATGATGTCGGCGAAGGCT +
Preference number: 4 (lower is better)
Translates to: IGRISTYFGVRKPMEVQLDSFSE*MMSAKA
Trigger: AGCCTTCGCCGACATCATCCACTCACTAAAGGAGTC...GAGTTGTACCTCCATTGGCTTCCTCACTCCAAAATAGGTGCTGATCCTTCCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CCA 90 bp GAGTTTGAGTCAGAGGCTTTATGTCCCCAAACCCAACCCCCTCTGAGTATTAAAGACTCCTTTAGTGAGTaGATGATGTCGGCGAAGGCT +
Preference number: 4 (lower is better)
Translates to: EFESEALCPQTQPPLSIKDSFSE*MMSAKA
Trigger: AGCCTTCGCCGACATCATCCACTCACTAAAGGAGTC...TTTAATACTCAGAGGGGGTTGGGTTTGGGGACATAAAGCCTCTGACTCAAACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000460649.5
ENST00000536991.5
CDS-3UTR CCA 90 bp CTGTGTGTCCCTTTGTGGCCATGTAAGAGACCACACTGCTGTAGGCTGAGAAGGATAAACCAAAATCAGTaGTTCCAGGATCCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: LCVPLWPCKRPHCCRLRRINQNQ*FQDPSE
Trigger: CTCTGAAGGATCCTGGAACCACTGATTTTGGTTTAT...CCTTCTCAGCCTACAGCAGTGTGGTCTCTTACATGGCCACAAAGGGACACACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CCA 90 bp TGCCACCACGCCCGGCATGAGTGGAATTTTAGTGTTAAATCTCTTCCTGACTCTGCAAAGGGAAACCACTaGGCATCCCCTTTGTTTCTA +
Preference number: 4 (lower is better)
Translates to: CHHARHEWNFSVKSLPDSAKGNH*ASPLFL
Trigger: TAGAAACAAAGGGGATGCCCAGTGGTTTCCCTTTGC...AGAGTCAGGAAGAGATTTAACACTAAAATTCCACTCATGCCGGGCGTGGTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CCA 90 bp CCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAAACTAGAAAAAGGAAATGCTCTGCAATCCACTaGAACCAGCAGGCACTGAAG +
Preference number: 4 (lower is better)
Translates to: PGSLCSPTTCMCQTRKRKCSAIH*NQQALK
Trigger: CTTCAGTGCCTGCTGGTTCCAGTGGATTGCAGAGCA...TTTCCTTTTTCTAGTTTGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS-3UTR TCA 90 bp GCCCGGCATGAGTGGAATTTTAGTGTTAAATCTCTTCCTGACTCTGGGTTCAGTATAGTGGCACATAAGTaGGGAAGAAGCGGACGTAGA +
Preference number: 4 (lower is better)
Translates to: ARHEWNFSVKSLPDSGFSIVAHK*GRSGRR
Trigger: TCTACGTCCGCTTCTTCCTCACTTATGTGCCACTAT...ACTGAACCCAGAGTCAGGAAGAGATTTAACACTAAAATTCCACTCATGCCGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000536991.5
CDS-3UTR TCA 90 bp TGCCACCACGCCCGGCATGAGTGGAATTTTAGTGTTAAATCTCTTCCTGACTCTTCCATGTTCCGGTCATaGTCAATGTGCATGGGAATA +
Preference number: 4 (lower is better)
Translates to: CHHARHEWNFSVKSLPDSSMFRS*SMCMGI
Trigger: TATTCCCATGCACATTGATCATGACCGGAACATGGA...AGAGTCAGGAAGAGATTTAACACTAAAATTCCACTCATGCCGGGCGTGGTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000536991.5
CDS-3UTR TCA 90 bp ATAGGAAGGATCAGCACCTATTTTGGAGTGAGGAAGCCAATGGAGGTACAACTCACTGCCTTATCCCTCTaGGGTTTGCAAATGAGGATG +
Preference number: 4 (lower is better)
Translates to: IGRISTYFGVRKPMEVQLTALSL*GLQMRM
Trigger: CATCCTCATTTGCAAACCTCAGAGGGATAAGGCAGT...GAGTTGTACCTCCATTGGCTTCCTCACTCCAAAATAGGTGCTGATCCTTCCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR TCA 90 bp ATAGGAAGGATCAGCACCTATTTTGGAGTGAGGAAGCCAATGGAGGTACAACTCGAAGTGTTCTGTTCCTaGGGAGTGGTTAAAGAGGTG +
Preference number: 4 (lower is better)
Translates to: IGRISTYFGVRKPMEVQLEVFCS*GVVKEV
Trigger: CACCTCTTTAACCACTCCTCAGGAACAGAACACTTC...GAGTTGTACCTCCATTGGCTTCCTCACTCCAAAATAGGTGCTGATCCTTCCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR TCA 90 bp CTGTGTGTCCCTTTGTGGCCATGTAAGAGACCACACTGCTGTAGGCTGAGAAGGATCTGTCAGTGGATTTaGGATCACTCATTTTACCAT +
Preference number: 4 (lower is better)
Translates to: LCVPLWPCKRPHCCRLRRICQWI*DHSFYH
Trigger: ATGGTAAAATGAGTGATCTCAAATCCACTGACAGAT...CCTTCTCAGCCTACAGCAGTGTGGTCTCTTACATGGCCACAAAGGGACACACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR GCA 90 bp CATGAGTGGAATTTTAGTGTTAAATCTCTTCCTGACTCTGGGTTCAGTAGGTCCGCATGGTGCTGGAAGTaGATGTGGTTCCACCAACTG +
Preference number: 4 (lower is better)
Translates to: HEWNFSVKSLPDSGFSRSAWCWK*MWFHQL
Trigger: CAGTTGGTGGAACCACATGCACTTCCAGCACCATGC...GGACCTACTGAACCCAGAGTCAGGAAGAGATTTAACACTAAAATTCCACTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR GCA 90 bp TCTGTTACCCTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAAACTAGCAAAGAAGAAGGGATaGATGTTGATGTCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: SVTLLVLSVHQLPACAKLAKKKG*MLMSGS
Trigger: AGACCCAGACATCAACATGCATCCCTTCTTCTTTGC...TAGTTTGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAGGGTAACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000433932.5
CDS-3UTR GCA 90 bp GCCCGGCATGAGTGGAATTTTAGTGTTAAATCTCTTCCTGACTCTGGGTTCAGTAATAATTTACACCCCTaGCCCAACAGCTCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: ARHEWNFSVKSLPDSGFSNNLHP*PNSSFP
Trigger: AGGGAAGGAGCTGTTGGGGCAGGGGTGTAAATTATT...ACTGAACCCAGAGTCAGGAAGAGATTTAACACTAAAATTCCACTCATGCCGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000536991.5
CDS-3UTR GCA 90 bp AATAATTTACACCCCTGCCCCAACAGCTCCTTCCCTCCTAGGGACTTCTGTGTCCCAACTACCTGCATGTaGCAAACTAGAAAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: NNLHPCPNSSFPPRDFCVPTTCM*QTRKRK
Trigger: TTTCCTTTTTCTAGTTTGGCACATGCAGGTAGTTGG...GACACAGAAGTCCCTAGGAGGGAAGGAGCTGTTGGGGCAGGGGTGTAAATTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000536991.5
CDS-3UTR GCA 90 bp CTCCTCTTCTGTTACCCTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCTGTTCACCAACTACCTaGATGTGCCAAACTAGAAAA +
Preference number: 4 (lower is better)
Translates to: LLFCYPPGSLCSPTTCMCCSPTT*MCQTRK
Trigger: TTTTCTAGTTTGGCACATGCAGGTAGTTGGTGAACA...GCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAGGGTAACAGAAGAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000536991.5
CDS-3UTR GCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGAAGTTGGAATTCATGCTaGCATGATCTACTTGACCAG +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRSWNSC*HDLLDQ
Trigger: CTGGTCAAGTAGATCATGGCAGCATGAATTCCAACT...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR GCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGATCTTTGTTTGCATGGTaGAGCCATTCTCCTGGTTAT +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRSLFAW*SHSPGY
Trigger: ATAACCAGGAGAATGGCTGCACCATGCAAACAAAGA...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460649.5
CDS-3UTR GCA 90 bp TGCCACCACGCCCGGCATGAGTGGAATTTTAGTGTTAAATCTCTTCCTGACTCTGCATGGGACTTGCTCTaGTCCCACACCTTTATTATT +
Preference number: 4 (lower is better)
Translates to: CHHARHEWNFSVKSLPDSAWDLL*SHTFII
Trigger: AATAATAAAGGTGTGGGAGCAGAGCAAGTCCCATGC...AGAGTCAGGAAGAGATTTAACACTAAAATTCCACTCATGCCGGGCGTGGTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS-3UTR CCA 90 bp TCTGTTACCCTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAAACTAATGCATGTTGATGTCTaGGTCTTTGCGGAAGCAGTT +
Preference number: 4 (lower is better)
Translates to: SVTLLVLSVHQLPACAKLMHVDV*VFAEAV
Trigger: AACTGCTTCCGCAAAGACCCAGACATCAACATGCAT...TAGTTTGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAGGGTAACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000433932.5
CDS-3UTR CCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGAATCGTGGGAAAAAGATaGTGCTCAATCTGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRIVGKR*CSIWKL
Trigger: CAACTTCCAGATTGAGCACCATCTTTTTCCCACGAT...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000460649.5
ENST00000536991.5
ENST00000542506.5
CDS-3UTR CCA 90 bp ATAGGAAGGATCAGCACCTATTTTGGAGTGAGGAAGCCAATGGAGGTACAACTCTGTGTCGAGGCATCGTaGGAAAAAGATGGTGCTCAA +
Preference number: 4 (lower is better)
Translates to: IGRISTYFGVRKPMEVQLCVEAS*EKDGAQ
Trigger: TTGAGCACCATCTTTTTCCCACGATGCCTCGACACA...GAGTTGTACCTCCATTGGCTTCCTCACTCCAAAATAGGTGCTGATCCTTCCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGATGGGTCTTAGAACTGTaGCTAGAAGATAAAAGGGAG +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRWVLEL*LEDKRE
Trigger: CTCCCTTTTATCTTCTAGCCACAGTTCTAAGACCCA...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000460649.5
ENST00000536991.5
CDS-3UTR CCA 90 bp CGTGCCACCACGCCCGGCATGAGTGGAATTTTAGTGTTAAATCTCTTCCTGACTCACGCCCGGCATGAGTaGAATTTTAGTGTTAAATCT +
Preference number: 4 (lower is better)
Translates to: RATTPGMSGILVLNLFLTHARHE*NFSVKS
Trigger: AGATTTAACACTAAAATTCCACTCATGCCGGGCGTG...AGTCAGGAAGAGATTTAACACTAAAATTCCACTCATGCCGGGCGTGGTGGCACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000536991.5
CDS-3UTR CCA 90 bp CTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAAACTAGAAAAAGGATTGAGGACTTGGTCTTaGCTCAATAGAGCCTCACTG +
Preference number: 4 (lower is better)
Translates to: LLVLSVHQLPACAKLEKGLRTWS*LNRASL
Trigger: CAGTGAGGCTCTATTGAGCCAAGACCAAGTCCTCAA...TCCTTTTTCTAGTTTGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CCA 90 bp GAGTTTGAGTCAGAGGCTTTATGTCCCCAAACCCAACCCCCTCTGAGTATTAAACCTCCACAATATGTCTaGTGGTCAAACTTACCCCTC +
Preference number: 4 (lower is better)
Translates to: EFESEALCPQTQPPLSIKPPQYV*WSNLPL
Trigger: GAGGGGTAAGTTTGACCACCAGACATATTGTGGAGG...TTTAATACTCAGAGGGGGTTGGGTTTGGGGACATAAAGCCTCTGACTCAAACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000460649.5
CDS-3UTR CCA 90 bp GAGTTTGAGTCAGAGGCTTTATGTCCCCAAACCCAACCCCCTCTGAGTATTAAAGTGCAGCCATTCTCCTaGTTATCCAGACTCACTCAT +
Preference number: 4 (lower is better)
Translates to: EFESEALCPQTQPPLSIKVQPFS*LSRLTH
Trigger: ATGAGTGAGTCTGGATAACCAGGAGAATGGCTGCAC...TTTAATACTCAGAGGGGGTTGGGTTTGGGGACATAAAGCCTCTGACTCAAACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460649.5
CDS-3UTR CCA 90 bp TCTGTTACCCTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAAACTAAGTGGAAACTGGGGTTaGATGGGAAGAACTAGTTTG +
Preference number: 4 (lower is better)
Translates to: SVTLLVLSVHQLPACAKLSGNWG*MGRTSL
Trigger: CAAACTAGTTCTTCCCATCCAACCCCAGTTTCCACT...TAGTTTGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAGGGTAACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS-3UTR CCA 90 bp CCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAAACTAGAAAAAGGAAATGTAGCCCTTCTCTGTaGCACCTGATGCTACCCATA +
Preference number: 4 (lower is better)
Translates to: PGSLCSPTTCMCQTRKRKCSPSL*HLMLPI
Trigger: TATGGGTAGCATCAGGTGCCACAGAGAAGGGCTACA...TTTCCTTTTTCTAGTTTGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS-3UTR TCA 90 bp GCCCGGCATGAGTGGAATTTTAGTGTTAAATCTCTTCCTGACTCTGGGTTCAGTTCCATGTTCCGGTCATaGTCAATGTGCATGGGAATA +
Preference number: 4 (lower is better)
Translates to: ARHEWNFSVKSLPDSGFSSMFRS*SMCMGI
Trigger: TATTCCCATGCACATTGATCATGACCGGAACATGGA...ACTGAACCCAGAGTCAGGAAGAGATTTAACACTAAAATTCCACTCATGCCGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000536991.5
CDS-3UTR TCA 90 bp CTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAAACTAGAAAAAGGATCCATGTTCCGGTCATaGTCAATGTGCATGGGAATA +
Preference number: 4 (lower is better)
Translates to: LLVLSVHQLPACAKLEKGSMFRS*SMCMGI
Trigger: TATTCCCATGCACATTGATCATGACCGGAACATGGA...TCCTTTTTCTAGTTTGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000536991.5
CDS-3UTR TCA 90 bp CGTGCCACCACGCCCGGCATGAGTGGAATTTTAGTGTTAAATCTCTTCCTGACTCCCTTACATTCTTTATaGCCGAAATCTGTGTCTTTC +
Preference number: 4 (lower is better)
Translates to: RATTPGMSGILVLNLFLTPLHSL*PKSVSF
Trigger: GAAAGACACAGATTTCGGTCATAAAGAATGTAAGGG...AGTCAGGAAGAGATTTAACACTAAAATTCCACTCATGCCGGGCGTGGTGGCACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR TCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGAGAAGAGTTAGATACTTaGACAAGAGTGGACAGAGTA +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSREELDT*TRVDRV
Trigger: TACTCTGTCCACTCTTGTTCAAGTATCTAACTCTTC...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR TCA 90 bp TTTGGAGTGAGGAAGCCAATGGAGGTACAACTCCTCAATTCTAAGTTTTTGTTGGTGGTTCAGGTGCTTTaGGGACTTGGTCTTGGCTCA +
Preference number: 4 (lower is better)
Translates to: FGVRKPMEVQLLNSKFLLVVQVL*GLGLGS
Trigger: TGAGCCAAGACCAAGTCCTCAAAGCACCTGAACCAC...CAACAAAAACTTAGAATTGAGGAGTTGTACCTCCATTGGCTTCCTCACTCCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR TCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGACCTGTACCTCTTTTCTaGTTAATAACCACATTCTGC +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRPVPLF*LITTFC
Trigger: GCAGAATGTGGTTATTAATCAGAAAAGAGGTACAGG...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460649.5
CDS-3UTR GCA 90 bp CTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAAACTAGAAAAAGGAGTGGGAAAAAGATGGTaGTCAATCTGGAAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: LLVLSVHQLPACAKLEKGVGKRW*SIWKLR
Trigger: CCTCAACTTCCAGATTGAGCACCATCTTTTTCCCAC...TCCTTTTTCTAGTTTGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000536991.5
CDS-3UTR GCA 90 bp GAGTTTGAGTCAGAGGCTTTATGTCCCCAAACCCAACCCCCTCTGAGTATTAAAGTGGGAAAAAGATGGTaGTCAATCTGGAAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: EFESEALCPQTQPPLSIKVGKRW*SIWKLR
Trigger: CCTCAACTTCCAGATTGAGCACCATCTTTTTCCCAC...TTTAATACTCAGAGGGGGTTGGGTTTGGGGACATAAAGCCTCTGACTCAAACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000460649.5
ENST00000536991.5
CDS-3UTR GCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGATGTTCACCAACTACCTaGATGTGCCAAACTAGAAAA +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRCSPTT*MCQTRK
Trigger: TTTTCTAGTTTGGCACATGCAGGTAGTTGGTGAACA...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000536991.5
CDS-3UTR GCA 90 bp GGAATTCATGCTGCCATGATCTACTTGACCAGAGGCAGCTTTTCCTCTCTAAGCTCATATTCCTATGTTTaGTCTCTGGAGAGATGGGCT +
Preference number: 4 (lower is better)
Translates to: GIHAAMIYLTRGSFSSLSSYSYV*SLERWA
Trigger: AGCCCATCTCTCCAGAGAGCAAACATAGGAATATGA...GCTTAGAGAGGAAAAGCTGCCTCTGGTCAAGTAGATCATGGCAGCATGAATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR GCA 90 bp GAGTTTGAGTCAGAGGCTTTATGTCCCCAAACCCAACCCCCTCTGAGTATTAAACATTGGGAATCAGGCTaGCTGCTAAGCTCAAATCAT +
Preference number: 4 (lower is better)
Translates to: EFESEALCPQTQPPLSIKHWESG*LLSSNH
Trigger: ATGATTTGAGCTTAGCAGGCAGCCTGATTCCCAATG...TTTAATACTCAGAGGGGGTTGGGTTTGGGGACATAAAGCCTCTGACTCAAACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460649.5
CDS-3UTR GCA 90 bp GAGTTTGAGTCAGAGGCTTTATGTCCCCAAACCCAACCCCCTCTGAGTATTAAACTAAATCCTTCAGCATaGCGCCAAATGAATCTGCCA +
Preference number: 4 (lower is better)
Translates to: EFESEALCPQTQPPLSIKLNPSA*RQMNLP
Trigger: TGGCAGATTCATTTGGCGGCATGCTGAAGGATTTAG...TTTAATACTCAGAGGGGGTTGGGTTTGGGGACATAAAGCCTCTGACTCAAACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460649.5
CDS-3UTR GCA 90 bp CGTGCCACCACGCCCGGCATGAGTGGAATTTTAGTGTTAAATCTCTTCCTGACTGAGTTGAAGAAGTGTTaGATTCTACATGCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: RATTPGMSGILVLNLFLTELKKC*ILHASS
Trigger: TGAGGAAGCATGTAGAATGCAACACTTCTTCAACTC...AGTCAGGAAGAGATTTAACACTAAAATTCCACTCATGCCGGGCGTGGTGGCACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS-3UTR CCA 90 bp AATAATTTACACCCCTGCCCCAACAGCTCCTTCCCTCCTAGGGACTTCTGTGTCAAGAAGTATTTGTGCTaGTGGTTGTACGGCATATAT +
Preference number: 4 (lower is better)
Translates to: NNLHPCPNSSFPPRDFCVKKYLC*WLYGIY
Trigger: ATATATGCCGTACAACCACCAGCACAAATACTTCTT...GACACAGAAGTCCCTAGGAGGGAAGGAGCTGTTGGGGCAGGGGTGTAAATTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000433932.5
CDS-3UTR CCA 90 bp GAGTTTGAGTCAGAGGCTTTATGTCCCCAAACCCAACCCCCTCTGAGTATTAAAATGTGCATGGGAATATaGTTCATCTGTGTCACCCAC +
Preference number: 4 (lower is better)
Translates to: EFESEALCPQTQPPLSIKMCMGI*FICVTH
Trigger: GTGGGTGACACAGATGAACCATATTCCCATGCACAT...TTTAATACTCAGAGGGGGTTGGGTTTGGGGACATAAAGCCTCTGACTCAAACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000460649.5
ENST00000536991.5
CDS-3UTR CCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGACATGATCAATGTGCATaGGAATATGGTTCATCTGTG +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRHDQCA*EYGSSV
Trigger: CACAGATGAACCATATTCCCATGCACATTGATCATG...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000460649.5
ENST00000536991.5
ENST00000542506.5
CDS-3UTR CCA 90 bp CCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAAACTAGAAAAAGGAAACTTCTGTTACCCTCCTaGTTCTCTCTGTTCACCAAC +
Preference number: 4 (lower is better)
Translates to: PGSLCSPTTCMCQTRKRKLLLPS*FSLFTN
Trigger: GTTGGTGAACAGAGAGAACCAGGAGGGTAACAGAAG...TTTCCTTTTTCTAGTTTGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000536991.5
CDS-3UTR CCA 90 bp CTGTGTGTCCCTTTGTGGCCATGTAAGAGACCACACTGCTGTAGGCTGAGAAGGAATTATCTCCCAATTTaGTCACTTCTGCTAATTGCT +
Preference number: 4 (lower is better)
Translates to: LCVPLWPCKRPHCCRLRRNYLPI*SLLLIA
Trigger: AGCAATTAGCAGAAGTGACCAAATTGGGAGATAATT...CCTTCTCAGCCTACAGCAGTGTGGTCTCTTACATGGCCACAAAGGGACACACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR TCA 90 bp GTTAGATACTTGAACAAGAGTGGACAGAGTAAGATACCTAGCTACAGCAATAGACCAATACCACAGTCTTaGCCTTTGCCCTGCCTGCTT +
Preference number: 4 (lower is better)
Translates to: VRYLNKSGQSKIPSYSNRPIPQS*PLPCLL
Trigger: AAGCAGGCAGGGCAAAGGTCAAGACTGTGGTATTGG...TCTATTGCTGTAGCTAGGTATCTTACTCTGTCCACTCTTGTTCAAGTATCTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR TCA 90 bp GAGTTTGAGTCAGAGGCTTTATGTCCCCAAACCCAACCCCCTCTGAGTATTAAACAAATCTCTCATCACTaGACCAAGCACCATACTCTT +
Preference number: 4 (lower is better)
Translates to: EFESEALCPQTQPPLSIKQISHH*TKHHTL
Trigger: AAGAGTATGGTGCTTGGTTCAGTGATGAGAGATTTG...TTTAATACTCAGAGGGGGTTGGGTTTGGGGACATAAAGCCTCTGACTCAAACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460649.5
CDS-3UTR GCA 90 bp TTTGGAGTGAGGAAGCCAATGGAGGTACAACTCCTCAATTCTAAGTTTTTGTTGTGGTACTCTATGCCATaGTTGGCACACAAGGACTGC +
Preference number: 4 (lower is better)
Translates to: FGVRKPMEVQLLNSKFLLWYSMP*LAHKDC
Trigger: GCAGTCCTTGTGTGCCAAGCATGGCATAGAGTACCA...CAACAAAAACTTAGAATTGAGGAGTTGTACCTCCATTGGCTTCCTCACTCCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR GCA 90 bp GGCATGAGTGGAATTTTAGTGTTAAATCTCTTCCTGACTCTGGGTTCAGTAGGTAATAATTTACACCCCTaGCCCAACAGCTCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: GMSGILVLNLFLTLGSVGNNLHP*PNSSFP
Trigger: AGGGAAGGAGCTGTTGGGGCAGGGGTGTAAATTATT...ACCTACTGAACCCAGAGTCAGGAAGAGATTTAACACTAAAATTCCACTCATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000536991.5
CDS-3UTR GCA 90 bp GCTTTGAGGACTTGGTCTTGGCTCAATAGAGCCTCACTGGTGTTTGCTCAGATTTGCTGTTATAATTCTTaGTCATCAGGTTCAACTGCC +
Preference number: 4 (lower is better)
Translates to: ALRTWSWLNRASLVFAQICCYNS*SSGSTA
Trigger: GGCAGTTGAACCTGATGAGCAAGAATTATAACAGCA...AATCTGAGCAAACACCAGTGAGGCTCTATTGAGCCAAGACCAAGTCCTCAAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR GCA 90 bp CTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAAACTAGAAAAAGGATGGGAAGAACTAGTTTaGCTTCAACCAATCATCAGC +
Preference number: 4 (lower is better)
Translates to: LLVLSVHQLPACAKLEKGWEELV*LQPIIS
Trigger: GCTGATGATTGGTTGAAGGCAAACTAGTTCTTCCCA...TCCTTTTTCTAGTTTGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS-3UTR CCA 90 bp ACCCAGGCTGTTTTAAACCTAGTTCTCCAGCTAAGTAAAATGTGCCCAAATGGATCAGCTCTTTATTCTTaGTGGGCTCAAAGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: TQAVLNLVLQLSKMCPNGSALYS*WAQSWA
Trigger: AGCCCAGCTTTGAGCCCACCAAGAATAAAGAGCTGA...TCCATTTGGGCACATTTTACTTAGCTGGAGAACTAGGTTTAAAACAGCCTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CCA 90 bp CCTCTTCTGTTACCCTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAAAGTATTTGTGCTGGTaGTTGTACGGCATATATTTT +
Preference number: 4 (lower is better)
Translates to: PLLLPSWFSLFTNYLHVPKYLCW*LYGIYF
Trigger: AAAATATATGCCGTACAACCACCAGCACAAATACTT...TGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAGGGTAACAGAAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000433932.5
CDS-3UTR CCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGAAAGAAGTATTTGTGCTaGTGGTTGTACGGCATATAT +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRKKYLC*WLYGIY
Trigger: ATATATGCCGTACAACCACCAGCACAAATACTTCTT...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000542506.5
CDS-3UTR CCA 90 bp TCTGTTACCCTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAAACTACATGATCAATGTGCATaGGAATATGGTTCATCTGTG +
Preference number: 4 (lower is better)
Translates to: SVTLLVLSVHQLPACAKLHDQCA*EYGSSV
Trigger: CACAGATGAACCATATTCCCATGCACATTGATCATG...TAGTTTGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAGGGTAACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000536991.5
CDS-3UTR CCA 90 bp CTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAAACTAGAAAAAGGAATCGTGGGAAAAAGATaGTGCTCAATCTGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: LLVLSVHQLPACAKLEKGIVGKR*CSIWKL
Trigger: CAACTTCCAGATTGAGCACCATCTTTTTCCCACGAT...TCCTTTTTCTAGTTTGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000536991.5
CDS-3UTR CCA 90 bp GAGTTTGAGTCAGAGGCTTTATGTCCCCAAACCCAACCCCCTCTGAGTATTAAATGGGTCTTAGAACTGTaGCTAGAAGATAAAAGGGAG +
Preference number: 4 (lower is better)
Translates to: EFESEALCPQTQPPLSIKWVLEL*LEDKRE
Trigger: CTCCCTTTTATCTTCTAGCCACAGTTCTAAGACCCA...TTTAATACTCAGAGGGGGTTGGGTTTGGGGACATAAAGCCTCTGACTCAAACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000460649.5
ENST00000536991.5
CDS-3UTR CCA 90 bp TTTGGAGTGAGGAAGCCAATGGAGGTACAACTCCTCAATTCTAAGTTTTTGTTGCTGTGTGTCCCTTTGTaGCCATGTAAGAGACCACAC +
Preference number: 4 (lower is better)
Translates to: FGVRKPMEVQLLNSKFLLLCVPL*PCKRPH
Trigger: GTGTGGTCTCTTACATGGCCACAAAGGGACACACAG...CAACAAAAACTTAGAATTGAGGAGTTGTACCTCCATTGGCTTCCTCACTCCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CCA 90 bp GAGTTTGAGTCAGAGGCTTTATGTCCCCAAACCCAACCCCCTCTGAGTATTAAACATGAAATTACACATTaGGAATCAGGCTGCCTGCTA +
Preference number: 4 (lower is better)
Translates to: EFESEALCPQTQPPLSIKHEITH*ESGCLL
Trigger: TAGCAGGCAGCCTGATTCCCAATGTGTAATTTCATG...TTTAATACTCAGAGGGGGTTGGGTTTGGGGACATAAAGCCTCTGACTCAAACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460649.5
CDS-3UTR CCA 90 bp GAGTTTGAGTCAGAGGCTTTATGTCCCCAAACCCAACCCCCTCTGAGTATTAAACCACAATATGTCTGGTaGTCAAACTTACCCCTCATT +
Preference number: 4 (lower is better)
Translates to: EFESEALCPQTQPPLSIKPQYVW*SNLPLI
Trigger: AATGAGGGGTAAGTTTGACCACCAGACATATTGTGG...TTTAATACTCAGAGGGGGTTGGGTTTGGGGACATAAAGCCTCTGACTCAAACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000460649.5
CDS-3UTR CCA 90 bp GAGTTTGAGTCAGAGGCTTTATGTCCCCAAACCCAACCCCCTCTGAGTATTAAATCTACCAGGTTACCTTaGCCCATCTTGACAAAGTTT +
Preference number: 4 (lower is better)
Translates to: EFESEALCPQTQPPLSIKSTRLP*PILTKF
Trigger: AAACTTTGTCAAGATGGGCCAAGGTAACCTGGTAGA...TTTAATACTCAGAGGGGGTTGGGTTTGGGGACATAAAGCCTCTGACTCAAACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS-3UTR CCA 90 bp TCTGTTACCCTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAAACTAAGTTTCCTTAGTAGCTaGGACAGACTTTTAAAGCTG +
Preference number: 4 (lower is better)
Translates to: SVTLLVLSVHQLPACAKLSFLSS*DRLLKL
Trigger: CAGCTTTAAAAGTCTGTCCCAGCTACTAAGGAAACT...TAGTTTGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAGGGTAACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS-3UTR TCA 90 bp GGCATGAGTGGAATTTTAGTGTTAAATCTCTTCCTGACTCTGGGTTCAGTAGGTAAACCCAACCCCCTCTaGGTATTAAACTATAGTGGC +
Preference number: 4 (lower is better)
Translates to: GMSGILVLNLFLTLGSVGKPNPL*VLNYSG
Trigger: GCCACTATAGTTTAATACTCAGAGGGGGTTGGGTTT...ACCTACTGAACCCAGAGTCAGGAAGAGATTTAACACTAAAATTCCACTCATGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000536991.5
CDS-3UTR TCA 90 bp CTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAAACTAGAAAAAGGACTGTGTCTTTCCTCATaGCTGATAATTATCTCCCAA +
Preference number: 4 (lower is better)
Translates to: LLVLSVHQLPACAKLEKGLCLSS*LIIISQ
Trigger: TTGGGAGATAATTATCAGTCATGAGGAAAGACACAG...TCCTTTTTCTAGTTTGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR TCA 90 bp GTTAGATACTTGAACAAGAGTGGACAGAGTAAGATACCTAGCTACAGCAATAGAGCACCTATTTTGGAGTaGGGAAGCCAATGGAGGTAC +
Preference number: 4 (lower is better)
Translates to: VRYLNKSGQSKIPSYSNRAPILE*GSQWRY
Trigger: GTACCTCCATTGGCTTCCTCACTCCAAAATAGGTGC...TCTATTGCTGTAGCTAGGTATCTTACTCTGTCCACTCTTGTTCAAGTATCTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR TCA 90 bp GCCCGGCATGAGTGGAATTTTAGTGTTAAATCTCTTCCTGACTCTGGGTTCAGTAAGAAAACTGGGAGTTaGAGAAGTGTTGCATTCTAC +
Preference number: 4 (lower is better)
Translates to: ARHEWNFSVKSLPDSGFSKKTGS*RSVAFY
Trigger: GTAGAATGCAACACTTCTTCAACTCCCAGTTTTCTT...ACTGAACCCAGAGTCAGGAAGAGATTTAACACTAAAATTCCACTCATGCCGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS-3UTR CCA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGAAAGTATTTGTGCTGGTaGTTGTACGGCATATATTTT +
Preference number: 4 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRKYLCW*LYGIYF
Trigger: AAAATATATGCCGTACAACCACCAGCACAAATACTT...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000542506.5
CDS-3UTR CCA 90 bp GAGTTTGAGTCAGAGGCTTTATGTCCCCAAACCCAACCCCCTCTGAGTATTAAACATGATCAATGTGCATaGGAATATGGTTCATCTGTG +
Preference number: 4 (lower is better)
Translates to: EFESEALCPQTQPPLSIKHDQCA*EYGSSV
Trigger: CACAGATGAACCATATTCCCATGCACATTGATCATG...TTTAATACTCAGAGGGGGTTGGGTTTGGGGACATAAAGCCTCTGACTCAAACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000460649.5
ENST00000536991.5
CDS-3UTR CCA 90 bp GAGTTTGAGTCAGAGGCTTTATGTCCCCAAACCCAACCCCCTCTGAGTATTAAACTCTTGAAAGAAAACTaGGAGTTGAAGAAGTGTTGC +
Preference number: 4 (lower is better)
Translates to: EFESEALCPQTQPPLSIKLLKEN*ELKKCC
Trigger: GCAACACTTCTTCAACTCCCAGTTTTCTTTCAAGAG...TTTAATACTCAGAGGGGGTTGGGTTTGGGGACATAAAGCCTCTGACTCAAACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS-3UTR GCA 90 bp GTTAGATACTTGAACAAGAGTGGACAGAGTAAGATACCTAGCTACAGCAATAGAACAGGCATGAGCCACTaGATCCAGCTTGCTTCTAAT +
Preference number: 4 (lower is better)
Translates to: VRYLNKSGQSKIPSYSNRTGMSH*IQLASN
Trigger: ATTAGAAGCAAGCTGGATGCAGTGGCTCATGCCTGT...TCTATTGCTGTAGCTAGGTATCTTACTCTGTCCACTCTTGTTCAAGTATCTAAC
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CCA 90 bp GAGTTTGAGTCAGAGGCTTTATGTCCCCAAACCCAACCCCCTCTGAGTATTAAAAAGAAGTATTTGTGCTaGTGGTTGTACGGCATATAT +
Preference number: 4 (lower is better)
Translates to: EFESEALCPQTQPPLSIKKKYLC*WLYGIY
Trigger: ATATATGCCGTACAACCACCAGCACAAATACTTCTT...TTTAATACTCAGAGGGGGTTGGGTTTGGGGACATAAAGCCTCTGACTCAAACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000433932.5
CDS-3UTR CCA 90 bp CATGAGTGGAATTTTAGTGTTAAATCTCTTCCTGACTCTGGGTTCAGTAGGTCCTGGGTCTTAGAACTGTaGCTAGAAGATAAAAGGGAG +
Preference number: 4 (lower is better)
Translates to: HEWNFSVKSLPDSGFSRSWVLEL*LEDKRE
Trigger: CTCCCTTTTATCTTCTAGCCACAGTTCTAAGACCCA...GGACCTACTGAACCCAGAGTCAGGAAGAGATTTAACACTAAAATTCCACTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000536991.5
CDS-3UTR CCA 90 bp GGCATGAGTGGAATTTTAGTGTTAAATCTCTTCCTGACTCTGGGTTCAGTAGGTCACGCCCGGCATGAGTaGAATTTTAGTGTTAAATCT +
Preference number: 4 (lower is better)
Translates to: GMSGILVLNLFLTLGSVGHARHE*NFSVKS
Trigger: AGATTTAACACTAAAATTCCACTCATGCCGGGCGTG...ACCTACTGAACCCAGAGTCAGGAAGAGATTTAACACTAAAATTCCACTCATGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000536991.5
CDS-3UTR GCA 90 bp CATGAGTGGAATTTTAGTGTTAAATCTCTTCCTGACTCTGGGTTCAGTAGGTCCCCAACTACCTGCATGTaGCAAACTAGAAAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: HEWNFSVKSLPDSGFSRSPTTCM*QTRKRK
Trigger: TTTCCTTTTTCTAGTTTGGCACATGCAGGTAGTTGG...GGACCTACTGAACCCAGAGTCAGGAAGAGATTTAACACTAAAATTCCACTCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000536991.5
CDS-3UTR GCA 90 bp GTTAGATACTTGAACAAGAGTGGACAGAGTAAGATACCTAGCTACAGCAATAGACTCATCAGGTTCAACTaGCTTATCCCTCTGAGGTTT +
Preference number: 4 (lower is better)
Translates to: VRYLNKSGQSKIPSYSNRLIRFN*LIPLRF
Trigger: AAACCTCAGAGGGATAAGGCAGTTGAACCTGATGAG...TCTATTGCTGTAGCTAGGTATCTTACTCTGTCCACTCTTGTTCAAGTATCTAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CCA 90 bp TTTGGAGTGAGGAAGCCAATGGAGGTACAACTCCTCAATTCTAAGTTTTTGTTGATCGTGGGAAAAAGATaGTGCTCAATCTGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: FGVRKPMEVQLLNSKFLLIVGKR*CSIWKL
Trigger: CAACTTCCAGATTGAGCACCATCTTTTTCCCACGAT...CAACAAAAACTTAGAATTGAGGAGTTGTACCTCCATTGGCTTCCTCACTCCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CCA 90 bp TTTGGAGTGAGGAAGCCAATGGAGGTACAACTCCTCAATTCTAAGTTTTTGTTGTGGGTCTTAGAACTGTaGCTAGAAGATAAAAGGGAG +
Preference number: 4 (lower is better)
Translates to: FGVRKPMEVQLLNSKFLLWVLEL*LEDKRE
Trigger: CTCCCTTTTATCTTCTAGCCACAGTTCTAAGACCCA...CAACAAAAACTTAGAATTGAGGAGTTGTACCTCCATTGGCTTCCTCACTCCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CCA 90 bp ACCCAGGCTGTTTTAAACCTAGTTCTCCAGCTAAGTAAAATGTGCCCAAATGGACTTGAAATTTTAGGTTaGGAAGCAAAGGGAAACCAC +
Preference number: 4 (lower is better)
Translates to: TQAVLNLVLQLSKMCPNGLEILG*EAKGNH
Trigger: GTGGTTTCCCTTTGCTTCCCAACCTAAAATTTCAAG...TCCATTTGGGCACATTTTACTTAGCTGGAGAACTAGGTTTAAAACAGCCTGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CCA 90 bp CATGAGTGGAATTTTAGTGTTAAATCTCTTCCTGACTCTGGGTTCAGTAGGTCCAAAGCTGGGAATATGTaGCAGTCATCAGAAAGATCT +
Preference number: 4 (lower is better)
Translates to: HEWNFSVKSLPDSGFSRSKAGNM*QSSERS
Trigger: AGATCTTTCTGATGACTGCCACATATTCCCAGCTTT...GGACCTACTGAACCCAGAGTCAGGAAGAGATTTAACACTAAAATTCCACTCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS-3UTR GCA 90 bp GTTAGATACTTGAACAAGAGTGGACAGAGTAAGATACCTAGCTACAGCAATAGAGTGAGTTGGAATTCATaGTGCCATGATCTACTTGAC +
Preference number: 4 (lower is better)
Translates to: VRYLNKSGQSKIPSYSNRVSWNS*CHDLLD
Trigger: GTCAAGTAGATCATGGCAGCATGAATTCCAACTCAC...TCTATTGCTGTAGCTAGGTATCTTACTCTGTCCACTCTTGTTCAAGTATCTAAC
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR GCA 90 bp GTTAGATACTTGAACAAGAGTGGACAGAGTAAGATACCTAGCTACAGCAATAGATGTTCACCAACTACCTaGATGTGCCAAACTAGAAAA +
Preference number: 4 (lower is better)
Translates to: VRYLNKSGQSKIPSYSNRCSPTT*MCQTRK
Trigger: TTTTCTAGTTTGGCACATGCAGGTAGTTGGTGAACA...TCTATTGCTGTAGCTAGGTATCTTACTCTGTCCACTCTTGTTCAAGTATCTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS CCA 90 bp TCCCTGAGCCGCGGTCTCGGCGGCCACCGGGTCGGGGGCCATAGCTaGCCTGGCGACGCCGCGCGCCGGGCCAGCAGGGGCTGTCAGGCG +
Preference number: 5 (lower is better)
Translates to: SLSRGLGGHRVGGHS*PGDAARRASRGCQA
Trigger: CGCCTGACAGCCCCTGCTGGCCCGGCGCGCGGCGTCGCCAGGCCAGCTATGGCCCCCGACCCGGTGGCCGCCGAGACCGCGGCTCAGGGA
80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS CCA 90 bp AGCACCGCAGGGCAGACCGGCGGGCCTCGCAGCGCGCGTTCCCATTaGCCGAGCCTCGTGGCGCGGGGAGCGAGATCCCGTCCCCCGGTG +
Preference number: 5 (lower is better)
Translates to: STAGQTGGPRSARSH*PSLVARGARSRPPV
Trigger: CACCGGGGGACGGGATCTCGCTCCCCGCGCCACGAGGCTCGGCCAATGGGAACGCGCGCTGCGAGGCCCGCCGGTCTGCCCTGCGGTGCT
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS GCA 90 bp GGCTCCAGGAGTGGATTTGCTGGCGCGCGCCCAGAGCCAGCCGCCTaGGCGCCGGGTTTTCAGCACCGCAGGGCAGACCGGCGGGCCTCG +
Preference number: 5 (lower is better)
Translates to: GSRSGFAGARPEPAA*APGFQHRRADRRAS
Trigger: CGAGGCCCGCCGGTCTGCCCTGCGGTGCTGAAAACCCGGCGCGCAGGCGGCTGGCTCTGGGCGCGCGCCAGCAAATCCACTCCTGGAGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS CCA 90 bp AGACCGGCGGGCCTCGCAGCGCGCGTTCCCATTGGCCGAGCCTCGTaGCGCGGGGAGCGAGATCCCGTCCCCCGGTGGGTCTTGGGCAAC +
Preference number: 5 (lower is better)
Translates to: RPAGLAARVPIGRAS*RGERDPVPRWVLGN
Trigger: GTTGCCCAAGACCCACCGGGGGACGGGATCTCGCTCCCCGCGCCACGAGGCTCGGCCAATGGGAACGCGCGCTGCGAGGCCCGCCGGTCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS GCA 90 bp GCTGTCAGGCGCGTGCTCGGGGTCCGCGGGCTCCAGGAGTGGATTTaGTGGCGCGCGCCCAGAGCCAGCCGCCTGCGCGCCGGGTTTTCA +
Preference number: 5 (lower is better)
Translates to: AVRRVLGVRGLQEWI*WRAPRASRLRAGFS
Trigger: TGAAAACCCGGCGCGCAGGCGGCTGGCTCTGGGCGCGCGCCAGCAAATCCACTCCTGGAGCCCGCGGACCCCGAGCACGCGCCTGACAGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS CCA 90 bp GTCAGGCGCGTGCTCGGGGTCCGCGGGCTCCAGGAGTGGATTTGCTaGCGCGCGCCCAGAGCCAGCCGCCTGCGCGCCGGGTTTTCAGCA +
Preference number: 5 (lower is better)
Translates to: VRRVLGVRGLQEWIC*RAPRASRLRAGFSA
Trigger: TGCTGAAAACCCGGCGCGCAGGCGGCTGGCTCTGGGCGCGCGCCAGCAAATCCACTCCTGGAGCCCGCGGACCCCGAGCACGCGCCTGAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS GCA 90 bp CACACTGCGGGAAGCTCCAGCGTTGGTGCCTGTTTCGTCTGCGCATaGGCCGGGACACGCCTGCGCCCTTGGCCGCAGTCAGGGCTCCCG +
Preference number: 5 (lower is better)
Translates to: HTAGSSSVGACFVCA*AGTRLRPWPQSGLP
Trigger: CGGGAGCCCTGACTGCGGCCAAGGGCGCAGGCGTGTCCCGGCGCATGCGCAGACGAAACAGGCACCAACGCTGGAGCTTCCCGCAGTGTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541683.1
CDS CCA 90 bp CGCCGCCGGATTCGACTTCCTGACGTCAGGCGGGCATCGCGGCGTTaGCTCCCAGGGGGCGCCGCGGTAGGAACAGCGGTTCTAGTGCAG +
Preference number: 5 (lower is better)
Translates to: RRRIRLPDVRRASRR*LPGGAAVGTAVLVQ
Trigger: CTGCACTAGAACCGCTGTTCCTACCGCGGCGCCCCCTGGGAGCCAACGCCGCGATGCCCGCCTGACGTCAGGAAGTCGAATCCGGCGGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544309.5
CDS TCA 90 bp CTGCGCCCTTGGCCGCAGTCAGGGCTCCCGAGTGGTCACTCTGGTTaGCCCGCGCAAGCTCTGGCCTCGCCCACTAGGCTGGTCGCGTCA +
Preference number: 5 (lower is better)
Translates to: LRPWPQSGLPSGHSG*PAQALASPTRLVAS
Trigger: TGACGCGACCAGCCTAGTGGGCGAGGCCAGAGCTTGCGCGGGTCAACCAGAGTGACCACTCGGGAGCCCTGACTGCGGCCAAGGGCGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541683.1
CDS CCA 90 bp GTCACTCTGGTTGACCCGCGCAAGCTCTGGCCTCGCCCACTAGGCTaGTCGCGTCAGAGGGTGGGGCGGGTCTTCGCCCCGCAGCGTCTA +
Preference number: 5 (lower is better)
Translates to: VTLVDPRKLWPRPLG*SRQRVGRVFAPQRL
Trigger: TAGACGCTGCGGGGCGAAGACCCGCCCCACCCTCTGACGCGACCAGCCTAGTGGGCGAGGCCAGAGCTTGCGCGGGTCAACCAGAGTGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541683.1
CDS CCA 90 bp AGTCAGGGCTCCCGAGTGGTCACTCTGGTTGACCCGCGCAAGCTCTaGCCTCGCCCACTAGGCTGGTCGCGTCAGAGGGTGGGGCGGGTC +
Preference number: 5 (lower is better)
Translates to: SQGSRVVTLVDPRKL*PRPLGWSRQRVGRV
Trigger: GACCCGCCCCACCCTCTGACGCGACCAGCCTAGTGGGCGAGGCCAGAGCTTGCGCGGGTCAACCAGAGTGACCACTCGGGAGCCCTGACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541683.1
CDS TCA 90 bp GCTAGCGCCCCAGAGCGTAAACAGCGGTCCGCTCCGCGGAATAGCTaGAGACCTCGCTGGCCTGCGGCTCAGTGGCCTCCCCGGCGATTC +
Preference number: 5 (lower is better)
Translates to: ASAPERKQRSAPRNS*RPRWPAAQWPPRRF
Trigger: GAATCGCCGGGGAGGCCACTGAGCCGCAGGCCAGCGAGGTCTTCAGCTATTCCGCGGAGCGGACCGCTGTTTACGCTCTGGGGCGCTAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473263.1
CDS TCA 90 bp CCTACCGCCCCAGAGCGTAAACAGCGGTCCGCTCCGCGGAATAGCTaGAGACCTCGCTGGCCTGCGGCTCAGTGGCCTCCCCGGCGATTC +
Preference number: 5 (lower is better)
Translates to: PTAPERKQRSAPRNS*RPRWPAAQWPPRRF
Trigger: GAATCGCCGGGGAGGCCACTGAGCCGCAGGCCAGCGAGGTCTTCAGCTATTCCGCGGAGCGGACCGCTGTTTACGCTCTGGGGCGGTAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541683.1
CDS GCA 90 bp CCAGCGTTGGTGCCTGTTTCGTCTGCGCATGCGCCGGGACACGCCTaGGCCCTTGGCCGCAGTCAGGGCTCCCGAGTGGTCACTCTGGTT +
Preference number: 5 (lower is better)
Translates to: PALVPVSSAHAPGHA*ALGRSQGSRVVTLV
Trigger: AACCAGAGTGACCACTCGGGAGCCCTGACTGCGGCCAAGGGCGCAGGCGTGTCCCGGCGCATGCGCAGACGAAACAGGCACCAACGCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541683.1
CDS GCA 90 bp CCAAATCACACTGCGGGAAGCTCCAGCGTTGGTGCCTGTTTCGTCTaGGCATGCGCCGGGACACGCCTGCGCCCTTGGCCGCAGTCAGGG +
Preference number: 5 (lower is better)
Translates to: PNHTAGSSSVGACFV*ACAGTRLRPWPQSG
Trigger: CCCTGACTGCGGCCAAGGGCGCAGGCGTGTCCCGGCGCATGCGCAGACGAAACAGGCACCAACGCTGGAGCTTCCCGCAGTGTGATTTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541683.1
CDS CCA 90 bp GGGCGGGTCTTCGCCCCGCAGCGTCTAAGCTCTGCTGCGACGTTATaGGAACCTGGTGACCCGCGGCACACTCTGGGACGCCAGGGTAGT +
Preference number: 5 (lower is better)
Translates to: GRVFAPQRLSSAATL*EPGDPRHTLGRQGS
Trigger: ACTACCCTGGCGTCCCAGAGTGTGCCGCGGGTCACCAGGTTCCCATAACGTCGCAGCAGAGCTTAGACGCTGCGGGGCGAAGACCCGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541683.1
CDS GCA 90 bp GAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGAGCTTaGAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTG +
Preference number: 5 (lower is better)
Translates to: EAEAGEWREPGKRRA*SEPRLRHCSPQSGL
Trigger: CAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS CCA 90 bp CGTGGCATCCTGCCCGGCGTAGTGGCTGATGACCCGGGAGCCCCCTaGATGCCGGCGGGTGAACTCGCTGATGTTGTACACCTTACGGTC +
Preference number: 5 (lower is better)
Translates to: RGILPGVVADDPGAP*MPAGELADVVHLTV
Trigger: GACCGTAAGGTGTACAACATCAGCGAGTTCACCCGCCGGCATCCAGGGGGCTCCCGGGTCATCAGCCACTACGCCGGGCAGGATGCCACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000424501.5
ENST00000491310.5
CDS CCA 90 bp CCCAAGCTCGAGCCGGCCTTCTTGGGGACCGGCGTCCGGGATTGGTaGAAGGAGAACGGCCTGGGGTTTGCAAAGCCCAGGTCGAGTGAG +
Preference number: 5 (lower is better)
Translates to: PKLEPAFLGTGVRDW*KENGLGFAKPRSSE
Trigger: CTCACTCGACCTGGGCTTTGCAAACCCCAGGCCGTTCTCCTTCCACCAATCCCGGACGCCGGTCCCCAAGAAGGCCGGCTCGAGCTTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000421879.5
ENST00000448607.1
CDS CCA 90 bp ATGTGGAAGGCCACAAAGGGATCCCCAAGCTCGAGCCGGCCTTCTTaGGGACCGGCGTCCGGGATTGGTGGAAGGAGAACGGCCTGGGGT +
Preference number: 5 (lower is better)
Translates to: MWKATKGSPSSSRPS*GPASGIGGRRTAWG
Trigger: ACCCCAGGCCGTTCTCCTTCCACCAATCCCGGACGCCGGTCCCCAAGAAGGCCGGCTCGAGCTTGGGGATCCCTTTGTGGCCTTCCACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421879.5
CDS GCA 90 bp CAAGCTTCCCGTTTCAGCCCCATCCTCGAGAATGGGCTCCTTTCCTaGTCCCTCTCCGCTCCTGCTGGCGAGTGGAGACCGGCACCTAGG +
Preference number: 5 (lower is better)
Translates to: QASRFSPILENGLLS*SLSAPAGEWRPAPR
Trigger: CCTAGGTGCCGGTCTCCACTCGCCAGCAGGAGCGGAGAGGGAGCAGGAAAGGAGCCCATTCTCGAGGATGGGGCTGAAACGGGAAGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433932.5
ENST00000473263.1
ENST00000541683.1
CDS CCA 90 bp GCTCTGCTGCGACGTTATGGGAACCTGGTGACCCGCGGCACACTCTaGGACGCCAGGGTAGTGGATAGGGACAGTGGAGGGCATCACGCT +
Preference number: 5 (lower is better)
Translates to: ALLRRYGNLVTRGTL*DARVVDRDSGGHHA
Trigger: AGCGTGATGCCCTCCACTGTCCCTATCCACTACCCTGGCGTCCCAGAGTGTGCCGCGGGTCACCAGGTTCCCATAACGTCGCAGCAGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541683.1
CDS-3UTR CAA 90 bp GTGCTGGAAGTGCATGTGGTTCCACCAACTGGCGGGGGCCCCCTTCAGGTGGCCTCTTTGCGGAAGCAGTaGGGCTTGGCATGGTGCTGG +
Preference number: 5 (lower is better)
Translates to: VLEVHVVPPTGGGPLQVASLRKQ*GLAWCW
Trigger: CCAGCACCATGCCAAGCCCAACTGCTTCCGCAAAGA...GGCCACCTGAAGGGGGCCCCCGCCAGTTGGTGGAACCACATGCACTTCCAGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000424501.5
CDS GCA 90 bp CAGCCCCCTGGACTCCGGCAGTGTTCGCACCAAAGGCCATCCTCCTaGCCGCCAGAAGGCTGTACCCAAGTTGAAGTGAGAGGTGAAGCC +
Preference number: 5 (lower is better)
Translates to: QPPGLRQCSHQRPSS*PPEGCTQVEVRGEA
Trigger: GGCTTCACCTCTCACTTCAACTTGGGTACAGCCTTCTGGCGGGCAGGAGGATGGCCTTTGGTGCGAACACTGCCGGAGTCCAGGGGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466716.5
CDS GCA 90 bp TCCCCGGCGATTCGAGAACAGCTCTGGGGGTCCTCGCTAAGTGTATaGCATTCCCAATCCCTTATGTACGCCAGCGGCCGCTTGCCCTCC +
Preference number: 5 (lower is better)
Translates to: SPAIREQLWGSSLSV*HSQSLMYASGRLPS
Trigger: GGAGGGCAAGCGGCCGCTGGCGTACATAAGGGATTGGGAATGGCATACACTTAGCGAGGACCCCCAGAGCTGTTCTCGAATCGCCGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473263.1
ENST00000541683.1
CDS-3UTR CAA 90 bp GTGCTGGAAGTGCATGTGGTTCCACCAACTGGCGGGGGCCCCCTTCAGGTGGCCAATGATCTGCCCATCTaGGCCTCCCAAGGTACTGGT +
Preference number: 5 (lower is better)
Translates to: VLEVHVVPPTGGGPLQVANDLPI*ASQGTG
Trigger: ACCAGTACCTTGGGAGGCCAAGATGGGCAGATCATT...GGCCACCTGAAGGGGGCCCCCGCCAGTTGGTGGAACCACATGCACTTCCAGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000424501.5
CDS CCA 90 bp CTGGCCTGCGGCTCAGTGGCCTCCCCGGCGATTCGAGAACAGCTCTaGGGGTCCTCGCTAAGTGTATGCCATTCCCAATCCCTTATGTAC +
Preference number: 5 (lower is better)
Translates to: LACGSVASPAIREQL*GSSLSVCHSQSLMY
Trigger: GTACATAAGGGATTGGGAATGGCATACACTTAGCGAGGACCCCCAGAGCTGTTCTCGAATCGCCGGGGAGGCCACTGAGCCGCAGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473263.1
ENST00000541683.1
CDS TCA 90 bp CTTGACGTCAGCGAGACCACGAGCCCACCTGAAGGAACCAACTCCTaGCACAGAAGCACAGGCCATCTCCCTAGGCCCAGCTGCCTTTTG +
Preference number: 5 (lower is better)
Translates to: LDVSETTSPPEGTNS*HRSTGHLPRPSCLL
Trigger: CAAAAGGCAGCTGGGCCTAGGGAGATGGCCTGTGCTTCTGTGTCAGGAGTTGGTTCCTTCAGGTGGGCTCGTGGTCTCGCTGACGTCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545986.1
CDS CCA 90 bp ACTGGGGCACTTCTGCGTTTCTTCCCTTTCCCTCCACCGTTGTTCTaGGTAGGGCTCCACATTTCCCTAAGCACTCTGGCCACCCCCTGC +
Preference number: 5 (lower is better)
Translates to: TGALLRFFPFPPPLF*VGLHISLSTLATPC
Trigger: GCAGGGGGTGGCCAGAGTGCTTAGGGAAATGTGGAGCCCTACCCAGAACAACGGTGGAGGGAAAGGGAAGAAACGCAGAAGTGCCCCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539419.5
ENST00000541683.1
ENST00000542506.5
ENST00000545245.5
CDS-3UTR CAA 90 bp AATAATTTACACCCCTGCCCCAACAGCTCCTTCCCTCCTAGGGACTTCTGTGTCGTCCCCCGGTGGGTCTaGGGCAACTCACAGCTGGGC +
Preference number: 5 (lower is better)
Translates to: NNLHPCPNSSFPPRDFCVVPRWV*GNSQLG
Trigger: GCCCAGCTGTGAGTTGCCCAAGACCCACCGGGGGAC...GACACAGAAGTCCCTAGGAGGGAAGGAGCTGTTGGGGCAGGGGTGTAAATTATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CAA 90 bp GCTGGAAGTGCATGTGGTTCCACCAACTGGCGGGGGCCCCCTTCAGGTGGCCAATTCACAAGGCCCTTGTaGATGTGGAAGGCCACAAAG +
Preference number: 5 (lower is better)
Translates to: AGSACGSTNWRGPPSGGQFTRPL*MWKATK
Trigger: CTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAA...TTGGCCACCTGAAGGGGGCCCCCGCCAGTTGGTGGAACCACATGCACTTCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000424501.5
CDS-3UTR CAA 90 bp GCTGGAAGTGCATGTGGTTCCACCAACTGGCGGGGGCCCCCTTCAGGTGGCCAATTCTTCACAAGGCCCTaGTTGATGTGGAAGGCCACA +
Preference number: 5 (lower is better)
Translates to: AGSACGSTNWRGPPSGGQFFTRP*LMWKAT
Trigger: TGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAA...TTGGCCACCTGAAGGGGGCCCCCGCCAGTTGGTGGAACCACATGCACTTCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000424501.5
CDS GCA 90 bp AAGCACTCTGGCCACCCCCTGCCCCAAGGCAGCTACTTTGGGTTGTaGAAGGTAAGGTCCATGGCGATAAGATTCACGTTGGCAGGTCCG +
Preference number: 5 (lower is better)
Translates to: KHSGHPLPQGSYFGL*KVRSMAIRFTLAGP
Trigger: CGGACCTGCCAACGTGAATCTTATCGCCATGGACCTTACCTTGCACAACCCAAAGTAGCTGCCTTGGGGCAGGGGGTGGCCAGAGTGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000541683.1
ENST00000542506.5
ENST00000545245.5
CDS-3UTR CAA 90 bp CTGGAAGTGCATGTGGTTCCACCAACTGGCGGGGGCCCCCTTCAGGTGGCCAATAAGAAGGGATGCATGTaGATGTCTGGGTCTTTGCGG +
Preference number: 5 (lower is better)
Translates to: LEVHVVPPTGGGPLQVANKKGCM*MSGSLR
Trigger: CCGCAAAGACCCAGACATCAACATGCATCCCTTCTT...ATTGGCCACCTGAAGGGGGCCCCCGCCAGTTGGTGGAACCACATGCACTTCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000424501.5
CDS TCA 90 bp AAAGGCCATCCTCCTGCCCGCCAGAAGGCTGTACCCAAGTTGAAGTaGGAGGTGAAGCCAGATGGACTTCCTGGGTCGAGTGCAGACTTG +
Preference number: 5 (lower is better)
Translates to: KGHPPARQKAVPKLK*EVKPDGLPGSSADL
Trigger: CAAGTCTGCACTCGACCCAGGAAGTCCATCTGGCTTCACCTCTCACTTCAACTTGGGTACAGCCTTCTGGCGGGCAGGAGGATGGCCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466716.5
CDS-3UTR CAA 90 bp AGTGCATGTGGTTCCACCAACTGGCGGGGGCCCCCTTCAGGTGGCCAATCACAAGTGAACTCGCTGATGTaGTACACCTTACGGTCGATC +
Preference number: 5 (lower is better)
Translates to: SACGSTNWRGPPSGGQSQVNSLM*YTLRSI
Trigger: GATCGACCGTAAGGTGTACAACATCAGCGAGTTCAC...TTGTGATTGGCCACCTGAAGGGGGCCCCCGCCAGTTGGTGGAACCACATGCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000424501.5
CDS-3UTR CAA 90 bp GGCATGAGTGGAATTTTAGTGTTAAATCTCTTCCTGACTCTGGGTTCAGTAGGTCAGCGCGCGTTCCCATaGGCCGAGCCTCGTGGCGCG +
Preference number: 5 (lower is better)
Translates to: GMSGILVLNLFLTLGSVGQRAFP*AEPRGA
Trigger: CGCGCCACGAGGCTCGGCCAATGGGAACGCGCGCTG...ACCTACTGAACCCAGAGTCAGGAAGAGATTTAACACTAAAATTCCACTCATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CAA 90 bp ATAGGAAGGATCAGCACCTATTTTGGAGTGAGGAAGCCAATGGAGGTACAACTCGCTCCAGGAGTGGATTaGCTGGCGCGCGCCCAGAGC +
Preference number: 5 (lower is better)
Translates to: IGRISTYFGVRKPMEVQLAPGVD*LARAQS
Trigger: GCTCTGGGCGCGCGCCAGCAAATCCACTCCTGGAGC...GAGTTGTACCTCCATTGGCTTCCTCACTCCAAAATAGGTGCTGATCCTTCCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CAA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGAGCGATAAGATTCACGTaGGCAGGTCCGGCAGCCCCG +
Preference number: 5 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRAIRFT*AGPAAP
Trigger: CGGGGCTGCCGGACCTGCCAACGTGAATCTTATCGC...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542506.5
CDS TCA 90 bp CTCCAATCAGGAGAGAGTTCATATACTTCTTCACAAGGCCCTTGTTaGTGTGGAAGGCCACAAAGGGATCCCTCCCCGGCCAGCGCTGTC +
Preference number: 5 (lower is better)
Translates to: LQSGESSYTSSQGPC*CGRPQRDPSPASAV
Trigger: GACAGCGCTGGCCGGGGAGGGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCCTGATTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433932.5
CDS TCA 90 bp CTCCAATCAGGAGAGAGTTCATATACTTCTTCACAAGGCCCTTGTTaGTGTGGAAGGCCACAAAGGGATCGCCAGCGGCCGCTTGCCCTC +
Preference number: 5 (lower is better)
Translates to: LQSGESSYTSSQGPC*CGRPQRDRQRPLAL
Trigger: GAGGGCAAGCGGCCGCTGGCGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCCTGATTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544696.5
CDS CCA 90 bp ACCTTTGTTCCTCTGGGGGTTGGACTGGGCTCTACCAGGTTACCTTaGCCCATCTTGACAAAGTTTAAGATAAGGTTGAGGGGCCGGGCG +
Preference number: 5 (lower is better)
Translates to: TFVPLGVGLGSTRLP*PILTKFKIRLRGRA
Trigger: CGCCCGGCCCCTCAACCTTATCTTAAACTTTGTCAAGATGGGCCAAGGTAACCTGGTAGAGCCCAGTCCAACCCCCAGAGGAACAAAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS CCA 90 bp CAGCTTTTGCCCAAGAATTTCAGTATAGGTGAGAAACAGGAGAGATaGGTGGGGCTGTGTCGGGCGTTGGTTCCTTCCGGCGGGTATGGT +
Preference number: 5 (lower is better)
Translates to: QLLPKNFSIGEKQER*VGLCRALVPSGGYG
Trigger: ACCATACCCGCCGGAAGGAACCAACGCCCGACACAGCCCCACCCATCTCTCCTGTTTCTCACCTATACTGAAATTCTTGGGCAAAAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000541683.1
ENST00000545986.1
CDS-3UTR CAA 90 bp GTGTTTGCTCAGATTGGGCAGCCTATGCCCAAAGCTACTTGGCTAAACAGGCTGTCTTTGCGGAAGCAGTaGGGCTTGGCATGGTGCTGG +
Preference number: 5 (lower is better)
Translates to: VFAQIGQPMPKATWLNRLSLRKQ*GLAWCW
Trigger: CCAGCACCATGCCAAGCCCAACTGCTTCCGCAAAGA...CAGCCTGTTTAGCCAAGTAGCTTTGGGCATAGGCTGCCCAATCTGAGCAAACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CAA 90 bp AATAATTTACACCCCTGCCCCAACAGCTCCTTCCCTCCTAGGGACTTCTGTGTCTCTTTGCGGAAGCAGTaGGGCTTGGCATGGTGCTGG +
Preference number: 5 (lower is better)
Translates to: NNLHPCPNSSFPPRDFCVSLRKQ*GLAWCW
Trigger: CCAGCACCATGCCAAGCCCAACTGCTTCCGCAAAGA...GACACAGAAGTCCCTAGGAGGGAAGGAGCTGTTGGGGCAGGGGTGTAAATTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000433932.5
CDS-3UTR CAA 90 bp AATAATTTACACCCCTGCCCCAACAGCTCCTTCCCTCCTAGGGACTTCTGTGTCGCTGACAGCAGGGGCTaGGACTGGTACTCTATGCCA +
Preference number: 5 (lower is better)
Translates to: NNLHPCPNSSFPPRDFCVADSRG*DWYSMP
Trigger: TGGCATAGAGTACCAGTCCAAGCCCCTGCTGTCAGC...GACACAGAAGTCCCTAGGAGGGAAGGAGCTGTTGGGGCAGGGGTGTAAATTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000536991.5
CDS-3UTR CAA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGAAAGCTCCCCTCTGCCTaGGCTCCAGAGTCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRKLPSA*APESSS
Trigger: GGAGGAAGACTCTGGAGCCAAGGCAGAGGGGAGCTT...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000460649.5
ENST00000536991.5
ENST00000542506.5
CDS-3UTR CAA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGACCTTTCCCTCCACCGTaGTTCTGGGTAGGGCTCCAC +
Preference number: 5 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRPFPPP*FWVGLH
Trigger: GTGGAGCCCTACCCAGAACAACGGTGGAGGGAAAGG...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542506.5
CDS TCA 90 bp CTCCAATCAGGAGAGAGTTCATATACTTCTTCACAAGGCCCTTGTTaGTGTGGAAGGCCACAAAGGGATCCGTGGCATCCTGCCCGGCGT +
Preference number: 5 (lower is better)
Translates to: LQSGESSYTSSQGPC*CGRPQRDPWHPARR
Trigger: ACGCCGGGCAGGATGCCACGGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCCTGATTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000424501.5
CDS TCA 90 bp TCTGCTCTAGTTAGAAGGATGCATCAAGGAATGGGAAGCATTGGCTaGGGGGAACCACTAAGAAACACCTGCCTGGGCTGGCCTTTCCCC +
Preference number: 5 (lower is better)
Translates to: SALVRRMHQGMGSIG*GEPLRNTCLGWPFP
Trigger: GGGGAAAGGCCAGCCCAGGCAGGTGTTTCTTAGTGGTTCCCCTCAGCCAATGCTTCCCATTCCTTGATGCATCCTTCTAACTAGAGCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545986.1
CDS CCA 90 bp CCGCCAGAAGGCTGTACCCAAGTTGAAGTGAGAGGTGAAGCCAGATaGACTTCCTGGGTCGAGTGCAGACTTGGAGAACTTTTCTGTAGC +
Preference number: 5 (lower is better)
Translates to: PPEGCTQVEVRGEAR*TSWVECRLGELFCS
Trigger: GCTACAGAAAAGTTCTCCAAGTCTGCACTCGACCCAGGAAGTCCATCTGGCTTCACCTCTCACTTCAACTTGGGTACAGCCTTCTGGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466716.5
CDS CCA 90 bp GGTTCTCCAAAAACCACGAAGAGGAAGACTTCCCTACGTCCGAACTaGGGCACTTCTGCGTTTCTTCCCTTTCCCTCCACCGTTGTTCTG +
Preference number: 5 (lower is better)
Translates to: GSPKTTKRKTSLRPN*GTSAFLPFPSTVVL
Trigger: CAGAACAACGGTGGAGGGAAAGGGAAGAAACGCAGAAGTGCCCCAGTTCGGACGTAGGGAAGTCTTCCTCTTCGTGGTTTTTGGAGAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000539419.5
ENST00000541683.1
ENST00000542506.5
CDS-3UTR CAA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGATCTTTGCGGAAGCAGTaGGGCTTGGCATGGTGCTGG +
Preference number: 5 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRSLRKQ*GLAWCW
Trigger: CCAGCACCATGCCAAGCCCAACTGCTTCCGCAAAGA...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000542506.5
CDS-3UTR CAA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGAGCTGACAGCAGGGGCTaGGACTGGTACTCTATGCCA +
Preference number: 5 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRADSRG*DWYSMP
Trigger: TGGCATAGAGTACCAGTCCAAGCCCCTGCTGTCAGC...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000460649.5
ENST00000536991.5
ENST00000542506.5
CDS-3UTR CAA 90 bp ATAATTTACACCCCTGCCCCAACAGCTCCTTCCCTCCTAGGGACTTCTGTGTCCTGGGCAGGGTGGCTGTaGTTATTGGTGAAGATAGGC +
Preference number: 5 (lower is better)
Translates to: IIYTPAPTAPSLLGTSVSWAGWL*LLVKIG
Trigger: GCCTATCTTCACCAATAACAACAGCCACCCTGCCCA...GGACACAGAAGTCCCTAGGAGGGAAGGAGCTGTTGGGGCAGGGGTGTAAATTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000536991.5
CDS-3UTR CAA 90 bp GCTTTGAGGACTTGGTCTTGGCTCAATAGAGCCTCACTGGTGTTTGCTCAGATTAAGCTCCCCTCTGCCTaGGCTCCAGAGTCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: ALRTWSWLNRASLVFAQIKLPSA*APESSS
Trigger: GGAGGAAGACTCTGGAGCCAAGGCAGAGGGGAGCTT...AATCTGAGCAAACACCAGTGAGGCTCTATTGAGCCAAGACCAAGTCCTCAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CAA 90 bp TCTGTTACCCTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAAACTAAAGCTCCCCTCTGCCTaGGCTCCAGAGTCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: SVTLLVLSVHQLPACAKLKLPSA*APESSS
Trigger: GGAGGAAGACTCTGGAGCCAAGGCAGAGGGGAGCTT...TAGTTTGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAGGGTAACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000536991.5
CDS-3UTR CAA 90 bp AATAATTTACACCCCTGCCCCAACAGCTCCTTCCCTCCTAGGGACTTCTGTGTCGAAAGTGTGTGTGTGTaGGGAGGGACCCTGTGGATC +
Preference number: 5 (lower is better)
Translates to: NNLHPCPNSSFPPRDFCVESVCV*GGTLWI
Trigger: GATCCACAGGGTCCCTCCCAACACACACACACTTTC...GACACAGAAGTCCCTAGGAGGGAAGGAGCTGTTGGGGCAGGGGTGTAAATTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS-3UTR CAA 90 bp AATAATTTACACCCCTGCCCCAACAGCTCCTTCCCTCCTAGGGACTTCTGTGTCACAGTCATCTGCCCTTaGTTCCTGGCAGCTCCACCA +
Preference number: 5 (lower is better)
Translates to: NNLHPCPNSSFPPRDFCVTVICP*FLAAPP
Trigger: TGGTGGAGCTGCCAGGAACAAAGGGCAGATGACTGT...GACACAGAAGTCCCTAGGAGGGAAGGAGCTGTTGGGGCAGGGGTGTAAATTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS TCA 90 bp CTCCAATCAGGAGAGAGTTCATATACTTCTTCACAAGGCCCTTGTTaGTGTGGAAGGCCACAAAGGGATCCCCAAGCTCGAGCCGGCCTT +
Preference number: 5 (lower is better)
Translates to: LQSGESSYTSSQGPC*CGRPQRDPQARAGL
Trigger: AAGGCCGGCTCGAGCTTGGGGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCCTGATTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421879.5
CDS TCA 90 bp TCAGCCCCCTGGCATTATGCCCAGTACAAGAACCTCTGGAGACACTaGCCGCATGAAATTACACATTGGGAATCAGGCTGCCTGCTAAGC +
Preference number: 5 (lower is better)
Translates to: SAPWHYAQYKNLWRH*PHEITHWESGCLLS
Trigger: GCTTAGCAGGCAGCCTGATTCCCAATGTGTAATTTCATGCGGTCAGTGTCTCCAGAGGTTCTTGTACTGGGCATAATGCCAGGGGGCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460649.5
CDS TCA 90 bp CTCCAATCAGGAGAGAGTTCATATACTTCTTCACAAGGCCCTTGTTaGTGTGGAAGGCCACAAAGGGATCCTGAGGCTCGGGGCTGCAGA +
Preference number: 5 (lower is better)
Translates to: LQSGESSYTSSQGPC*CGRPQRDPEARGCR
Trigger: TCTGCAGCCCCGAGCCTCAGGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCCTGATTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540767.5
CDS TCA 90 bp CTCCAATCAGGAGAGAGTTCATATACTTCTTCACAAGGCCCTTGTTaGTGTGGAAGGCCACAAAGGGATCAGCTGGGCTGCCAACACGCG +
Preference number: 5 (lower is better)
Translates to: LQSGESSYTSSQGPC*CGRPQRDQLGCQHA
Trigger: CGCGTGTTGGCAGCCCAGCTGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCCTGATTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544309.5
CDS-3UTR CAA 90 bp ATAATTTACACCCCTGCCCCAACAGCTCCTTCCCTCCTAGGGACTTCTGTGTCCTTCACAAGGCCCTTGTaGATGTGGAAGGCCACAAAG +
Preference number: 5 (lower is better)
Translates to: IIYTPAPTAPSLLGTSVSFTRPL*MWKATK
Trigger: CTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAA...GGACACAGAAGTCCCTAGGAGGGAAGGAGCTGTTGGGGCAGGGGTGTAAATTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000433932.5
CDS-3UTR CAA 90 bp GTGTTTGCTCAGATTGGGCAGCCTATGCCCAAAGCTACTTGGCTAAACAGGCTGGTCAGCTCTTTATTCTaGGTGGGCTCAAAGCTGGGC +
Preference number: 5 (lower is better)
Translates to: VFAQIGQPMPKATWLNRLVSSLF*VGSKLG
Trigger: GCCCAGCTTTGAGCCCACCAAGAATAAAGAGCTGAC...CAGCCTGTTTAGCCAAGTAGCTTTGGGCATAGGCTGCCCAATCTGAGCAAACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CAA 90 bp TGCCACCACGCCCGGCATGAGTGGAATTTTAGTGTTAAATCTCTTCCTGACTCTGCTGACAGCAGGGGCTaGGACTGGTACTCTATGCCA +
Preference number: 5 (lower is better)
Translates to: CHHARHEWNFSVKSLPDSADSRG*DWYSMP
Trigger: TGGCATAGAGTACCAGTCCAAGCCCCTGCTGTCAGC...AGAGTCAGGAAGAGATTTAACACTAAAATTCCACTCATGCCGGGCGTGGTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000536991.5
CDS-3UTR CAA 90 bp CGTGCCACCACGCCCGGCATGAGTGGAATTTTAGTGTTAAATCTCTTCCTGACTCCCAATACCACAGTCTaGACCTTTGCCCTGCCTGCT +
Preference number: 5 (lower is better)
Translates to: RATTPGMSGILVLNLFLTPNTTV*TFALPA
Trigger: AGCAGGCAGGGCAAAGGTCAAGACTGTGGTATTGGG...AGTCAGGAAGAGATTTAACACTAAAATTCCACTCATGCCGGGCGTGGTGGCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CAA 90 bp ATAATTTACACCCCTGCCCCAACAGCTCCTTCCCTCCTAGGGACTTCTGTGTCCTCACTGTGTGTCCCTTaGTGGCCATGTAAGAGACCA +
Preference number: 5 (lower is better)
Translates to: IIYTPAPTAPSLLGTSVSSLCVP*WPCKRP
Trigger: TGGTCTCTTACATGGCCACAAAGGGACACACAGTGA...GGACACAGAAGTCCCTAGGAGGGAAGGAGCTGTTGGGGCAGGGGTGTAAATTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS TCA 90 bp CCATGGCTCAGTCCATGCCAGTGCCCTGATCAAATCTCTCATCACTaGACCAAGCACCATACTCTTCCCCTGACACTAGTCCTCCACAAT +
Preference number: 5 (lower is better)
Translates to: PWLSPCQCPDQISHH*TKHHTLPLTLVLHN
Trigger: ATTGTGGAGGACTAGTGTCAGGGGAAGAGTATGGTGCTTGGTTCAGTGATGAGAGATTTGATCAGGGCACTGGCATGGACTGAGCCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460649.5
CDS CCA 90 bp GACCCATCCTTCCAGAACTATCTGTACCTTTGTTCCTCTGGGGGTTaGACTGGGCTCTACCAGGTTACCTTGGCCCATCTTGACAAAGTT +
Preference number: 5 (lower is better)
Translates to: DPSFQNYLYLCSSGG*TGLYQVTLAHLDKV
Trigger: AACTTTGTCAAGATGGGCCAAGGTAACCTGGTAGAGCCCAGTCCAACCCCCAGAGGAACAAAGGTACAGATAGTTCTGGAAGGATGGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS-3UTR CAA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGAGTCAGCTCTTTATTCTaGGTGGGCTCAAAGCTGGGC +
Preference number: 5 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRVSSLF*VGSKLG
Trigger: GCCCAGCTTTGAGCCCACCAAGAATAAAGAGCTGAC...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000542506.5
CDS-3UTR CAA 90 bp CTCCTCTTCTGTTACCCTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCAAGAAGGGATGCATGTaGATGTCTGGGTCTTTGCGG +
Preference number: 5 (lower is better)
Translates to: LLFCYPPGSLCSPTTCMCKKGCM*MSGSLR
Trigger: CCGCAAAGACCCAGACATCAACATGCATCCCTTCTT...GCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAGGGTAACAGAAGAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000433932.5
CDS-3UTR CAA 90 bp CCTCTTCTGTTACCCTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCACCACTGAACCAGTCATaGAAGGCAGACTTGTGGACA +
Preference number: 5 (lower is better)
Translates to: PLLLPSWFSLFTNYLHVPPLNQS*KADLWT
Trigger: TGTCCACAAGTCTGCCTTCAATGACTGGTTCAGTGG...TGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAGGGTAACAGAAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000536991.5
CDS-3UTR CAA 90 bp CTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAAACTAGAAAAAGGAGCTGACAGCAGGGGCTaGGACTGGTACTCTATGCCA +
Preference number: 5 (lower is better)
Translates to: LLVLSVHQLPACAKLEKGADSRG*DWYSMP
Trigger: TGGCATAGAGTACCAGTCCAAGCCCCTGCTGTCAGC...TCCTTTTTCTAGTTTGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000536991.5
CDS-3UTR CAA 90 bp GAGTTTGAGTCAGAGGCTTTATGTCCCCAAACCCAACCCCCTCTGAGTATTAAAGCTGACAGCAGGGGCTaGGACTGGTACTCTATGCCA +
Preference number: 5 (lower is better)
Translates to: EFESEALCPQTQPPLSIKADSRG*DWYSMP
Trigger: TGGCATAGAGTACCAGTCCAAGCCCCTGCTGTCAGC...TTTAATACTCAGAGGGGGTTGGGTTTGGGGACATAAAGCCTCTGACTCAAACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000460649.5
ENST00000536991.5
CDS-3UTR CAA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGATGGGCAGGGTGGCTGTaGTTATTGGTGAAGATAGGC +
Preference number: 5 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRWAGWL*LLVKIG
Trigger: GCCTATCTTCACCAATAACAACAGCCACCCTGCCCA...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000460649.5
ENST00000536991.5
ENST00000542506.5
CDS-3UTR CAA 90 bp CGTGCCACCACGCCCGGCATGAGTGGAATTTTAGTGTTAAATCTCTTCCTGACTTGGGCAGGGTGGCTGTaGTTATTGGTGAAGATAGGC +
Preference number: 5 (lower is better)
Translates to: RATTPGMSGILVLNLFLTWAGWL*LLVKIG
Trigger: GCCTATCTTCACCAATAACAACAGCCACCCTGCCCA...AGTCAGGAAGAGATTTAACACTAAAATTCCACTCATGCCGGGCGTGGTGGCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000536991.5
CDS-3UTR CAA 90 bp CCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAAACTAGAAAAAGGAAAAAGCTCCCCTCTGCCTaGGCTCCAGAGTCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: PGSLCSPTTCMCQTRKRKKLPSA*APESSS
Trigger: GGAGGAAGACTCTGGAGCCAAGGCAGAGGGGAGCTT...TTTCCTTTTTCTAGTTTGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000536991.5
CDS-3UTR CAA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGAAGTGGTTCAGGTGCTTaGAGGACTTGGTCTTGGCTC +
Preference number: 5 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRSGSGA*RTWSWL
Trigger: GAGCCAAGACCAAGTCCTCAAAGCACCTGAACCACT...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CAA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGAGCTGCCATGATCTACTaGACCAGAGGCAGCTTTTCC +
Preference number: 5 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRAAMIY*TRGSFS
Trigger: GGAAAAGCTGCCTCTGGTCAAGTAGATCATGGCAGC...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CAA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGAGGCAGCTACTTTGGGTaGTGCAAGGTAAGGTCCATG +
Preference number: 5 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRGSYFG*CKVRSM
Trigger: CATGGACCTTACCTTGCACAACCCAAAGTAGCTGCC...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542506.5
CDS-3UTR CAA 90 bp CCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAAACTAGAAAAAGGAAATTCAGTGACAGGTGCTaGGGAACTCAGGCCCCACGC +
Preference number: 5 (lower is better)
Translates to: PGSLCSPTTCMCQTRKRKFSDRC*GTQAPR
Trigger: GCGTGGGGCCTGAGTTCCCAAGCACCTGTCACTGAA...TTTCCTTTTTCTAGTTTGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS TCA 90 bp CTCCAATCAGGAGAGAGTTCATATACTTCTTCACAAGGCCCTTGTTaGTGTGGAAGGCCACAAAGGGATCCTGCAAGTGCCGGGAGAAGA +
Preference number: 5 (lower is better)
Translates to: LQSGESSYTSSQGPC*CGRPQRDPASAGRR
Trigger: TCTTCTCCCGGCACTTGCAGGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCCTGATTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466716.5
CDS TCA 90 bp CTCCAATCAGGAGAGAGTTCATATACTTCTTCACAAGGCCCTTGTTaGTGTGGAAGGCCACAAAGGGATCGTCCGAACTGGGGCACTTCT +
Preference number: 5 (lower is better)
Translates to: LQSGESSYTSSQGPC*CGRPQRDRPNWGTS
Trigger: AGAAGTGCCCCAGTTCGGACGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCCTGATTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545245.5
CDS CCA 90 bp GGATCCCACACTTTTAAAAGGGTGCTAATACTCTCTTACTTACCTTaGCCACAGCCCTGTCCCTACAGTCATCTGCCCTTTGTTCCTGGC +
Preference number: 5 (lower is better)
Translates to: GSHTFKRVLILSYLP*PQPCPYSHLPFVPG
Trigger: GCCAGGAACAAAGGGCAGATGACTGTAGGGACAGGGCTGTGGCCAAGGTAAGTAAGAGAGTATTAGCACCCTTTTAAAAGTGTGGGATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS-3UTR CAA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGATTCACAAGGCCCTTGTaGATGTGGAAGGCCACAAAG +
Preference number: 5 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRFTRPL*MWKATK
Trigger: CTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAA...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000542506.5
CDS-3UTR CAA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGATTCTTCACAAGGCCCTaGTTGATGTGGAAGGCCACA +
Preference number: 5 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRFFTRP*LMWKAT
Trigger: TGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAA...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000542506.5
CDS-3UTR CAA 90 bp CAAGGCAAAGAAGAAGGGATGCATGTTGATGTCTGGGTCTTTGCGGAAGCAGTTGTCAGCTCTTTATTCTaGGTGGGCTCAAAGCTGGGC +
Preference number: 5 (lower is better)
Translates to: QGKEEGMHVDVWVFAEAVVSSLF*VGSKLG
Trigger: GCCCAGCTTTGAGCCCACCAAGAATAAAGAGCTGAC...AACTGCTTCCGCAAAGACCCAGACATCAACATGCATCCCTTCTTCTTTGCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424501.5
CDS-3UTR CAA 90 bp TCTGTTACCCTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAAACTAGTCAGCTCTTTATTCTaGGTGGGCTCAAAGCTGGGC +
Preference number: 5 (lower is better)
Translates to: SVTLLVLSVHQLPACAKLVSSLF*VGSKLG
Trigger: GCCCAGCTTTGAGCCCACCAAGAATAAAGAGCTGAC...TAGTTTGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAGGGTAACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000433932.5
CDS-3UTR CAA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGAAAGAAGGGATGCATGTaGATGTCTGGGTCTTTGCGG +
Preference number: 5 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRKKGCM*MSGSLR
Trigger: CCGCAAAGACCCAGACATCAACATGCATCCCTTCTT...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000542506.5
CDS-3UTR CAA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGACCACTGAACCAGTCATaGAAGGCAGACTTGTGGACA +
Preference number: 5 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRPLNQS*KADLWT
Trigger: TGTCCACAAGTCTGCCTTCAATGACTGGTTCAGTGG...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000460649.5
ENST00000536991.5
ENST00000542506.5
CDS-3UTR CAA 90 bp AGGCTGAGAAGGCCACAGTGGTTCAGGTGCTTTGAGGACTTGGTCTTGGCTCAATCTCTACCATCTGTTTaGGTAAGAGCTAGCACCTCT +
Preference number: 5 (lower is better)
Translates to: RLRRPQWFRCFEDLVLAQSLPSV*VRASTS
Trigger: AGAGGTGCTAGCTCTTACCAAAACAGATGGTAGAGA...TTGAGCCAAGACCAAGTCCTCAAAGCACCTGAACCACTGTGGCCTTCTCAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CAA 90 bp CGTGCCACCACGCCCGGCATGAGTGGAATTTTAGTGTTAAATCTCTTCCTGACTCACTGGGCATCCCCTTaGTTTCTAGGGAGAAAAGAC +
Preference number: 5 (lower is better)
Translates to: RATTPGMSGILVLNLFLTHWASP*FLGRKD
Trigger: GTCTTTTCTCCCTAGAAACAAAGGGGATGCCCAGTG...AGTCAGGAAGAGATTTAACACTAAAATTCCACTCATGCCGGGCGTGGTGGCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CAA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGAGCCACTGCATCCAGCTaGCTTCTAATTTTCCTACCC +
Preference number: 5 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRATASS*LLIFLP
Trigger: GGGTAGGAAAATTAGAAGCAAGCTGGATGCAGTGGC...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CAA 90 bp TGCCACCACGCCCGGCATGAGTGGAATTTTAGTGTTAAATCTCTTCCTGACTCTACTCTCTTACTTACCTaGGCCACAGCCCTGTCCCTA +
Preference number: 5 (lower is better)
Translates to: CHHARHEWNFSVKSLPDSTLLLT*ATALSL
Trigger: TAGGGACAGGGCTGTGGCCAAGGTAAGTAAGAGAGT...AGAGTCAGGAAGAGATTTAACACTAAAATTCCACTCATGCCGGGCGTGGTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS-3UTR CAA 90 bp CTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAAACTAGAAAAAGGAAAGGGCCAGTTGATGTaGGGAGAGATGGCCTCTAGC +
Preference number: 5 (lower is better)
Translates to: LLVLSVHQLPACAKLEKGKGQLM*GEMASS
Trigger: GCTAGAGGCCATCTCTCCCAACATCAACTGGCCCTT...TCCTTTTTCTAGTTTGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS TCA 90 bp CTCCAATCAGGAGAGAGTTCATATACTTCTTCACAAGGCCCTTGTTaGTGTGGAAGGCCACAAAGGGATCCTTCAGCTGGGAGGAGATTC +
Preference number: 5 (lower is better)
Translates to: LQSGESSYTSSQGPC*CGRPQRDPSAGRRF
Trigger: GAATCTCCTCCCAGCTGAAGGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCCTGATTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448607.1
CDS CCA 90 bp GCACCATACTCTTCCCCTGACACTAGTCCTCCACAATATGTCTGGTaGTCAAACTTACCCCTCATTTCCAGCTTCTCTGCTCAGAGTTCA +
Preference number: 5 (lower is better)
Translates to: APYSSPDTSPPQYVW*SNLPLISSFSAQSS
Trigger: TGAACTCTGAGCAGAGAAGCTGGAAATGAGGGGTAAGTTTGACCACCAGACATATTGTGGAGGACTAGTGTCAGGGGAAGAGTATGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460649.5
CDS CCA 90 bp CAAGCACCATACTCTTCCCCTGACACTAGTCCTCCACAATATGTCTaGTGGTCAAACTTACCCCTCATTTCCAGCTTCTCTGCTCAGAGT +
Preference number: 5 (lower is better)
Translates to: QAPYSSPDTSPPQYV*WSNLPLISSFSAQS
Trigger: ACTCTGAGCAGAGAAGCTGGAAATGAGGGGTAAGTTTGACCACCAGACATATTGTGGAGGACTAGTGTCAGGGGAAGAGTATGGTGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460649.5
CDS CCA 90 bp ATCAGGAGAGAGTTCATATACTTCTTCACAAGGCCCTTGTTGATGTaGAAGGCCACAAAGGGATCCTCTCAGGGCTATGAGACTTCCGTC +
Preference number: 5 (lower is better)
Translates to: IRREFIYFFTRPLLM*KATKGSSQGYETSV
Trigger: GACGGAAGTCTCATAGCCCTGAGAGGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCCTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539419.5
CDS CCA 90 bp GGTCAGCTGTGGGACGGAACAGAGGGGCCTCTCTTGAAAGAAAACTaGGAGTTGAAGAAGTGTTGCATTCTACATGCTTCCTCATTTCCT +
Preference number: 5 (lower is better)
Translates to: GQLWDGTEGPLLKEN*ELKKCCILHASSFP
Trigger: AGGAAATGAGGAAGCATGTAGAATGCAACACTTCTTCAACTCCCAGTTTTCTTTCAAGAGAGGCCCCTCTGTTCCGTCCCACAGCTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS-3UTR CAA 90 bp TCTGTTACCCTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAAACTACCACTGAACCAGTCATaGAAGGCAGACTTGTGGACA +
Preference number: 5 (lower is better)
Translates to: SVTLLVLSVHQLPACAKLPLNQS*KADLWT
Trigger: TGTCCACAAGTCTGCCTTCAATGACTGGTTCAGTGG...TAGTTTGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAGGGTAACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000536991.5
CDS-3UTR CAA 90 bp GAGTTTGAGTCAGAGGCTTTATGTCCCCAAACCCAACCCCCTCTGAGTATTAAATGGTGTTTGCTCAGATaGGGCAGCCTATGCCCAAAG +
Preference number: 5 (lower is better)
Translates to: EFESEALCPQTQPPLSIKWCLLR*GSLCPK
Trigger: CTTTGGGCATAGGCTGCCCAATCTGAGCAAACACCA...TTTAATACTCAGAGGGGGTTGGGTTTGGGGACATAAAGCCTCTGACTCAAACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CAA 90 bp GAGTTTGAGTCAGAGGCTTTATGTCCCCAAACCCAACCCCCTCTGAGTATTAAAGCCTACAAGGTCTCTTaGCCTCTAGCTCTTCCTAGC +
Preference number: 5 (lower is better)
Translates to: EFESEALCPQTQPPLSIKAYKVS*PLALPS
Trigger: GCTAGGAAGAGCTAGAGGCAAAGAGACCTTGTAGGC...TTTAATACTCAGAGGGGGTTGGGTTTGGGGACATAAAGCCTCTGACTCAAACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460649.5
CDS-3UTR CAA 90 bp GAGTTTGAGTCAGAGGCTTTATGTCCCCAAACCCAACCCCCTCTGAGTATTAAACCTCTCAGCAGCTCTTaGTTTGCATGGTGCAGCCAT +
Preference number: 5 (lower is better)
Translates to: EFESEALCPQTQPPLSIKPLSSS*FAWCSH
Trigger: ATGGCTGCACCATGCAAACAAAGAGCTGCTGAGAGG...TTTAATACTCAGAGGGGGTTGGGTTTGGGGACATAAAGCCTCTGACTCAAACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460649.5
CDS-3UTR CAA 90 bp CCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAAACTAGAAAAAGGAAAACTAGGGAGATGGGCTaGTGCCACCCCAATCTGAAG +
Preference number: 5 (lower is better)
Translates to: PGSLCSPTTCMCQTRKRKTREMG*CHPNLK
Trigger: CTTCAGATTGGGGTGGCACAAGCCCATCTCCCTAGT...TTTCCTTTTTCTAGTTTGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS TCA 90 bp CTGGCATTATGCCCAGTACAAGAACCTCTGGAGACACTGACCGCATaGAATTACACATTGGGAATCAGGCTGCCTGCTAAGCTCAAATCA +
Preference number: 5 (lower is better)
Translates to: LALCPVQEPLETLTA*NYTLGIRLPAKLKS
Trigger: TGATTTGAGCTTAGCAGGCAGCCTGATTCCCAATGTGTAATTTCATGCGGTCAGTGTCTCCAGAGGTTCTTGTACTGGGCATAATGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460649.5
CDS CCA 90 bp ATCAGGAGAGAGTTCATATACTTCTTCACAAGGCCCTTGTTGATGTaGAAGGCCACAAAGGGATCCTGCAAGTGCCGGGAGAAGATGAAA +
Preference number: 5 (lower is better)
Translates to: IRREFIYFFTRPLLM*KATKGSCKCREKMK
Trigger: TTTCATCTTCTCCCGGCACTTGCAGGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCCTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466716.5
CDS CCA 90 bp ATCAGGAGAGAGTTCATATACTTCTTCACAAGGCCCTTGTTGATGTaGAAGGCCACAAAGGGATCCCAAGTTGAAGTGAGAGGTGAAGCC +
Preference number: 5 (lower is better)
Translates to: IRREFIYFFTRPLLM*KATKGSQVEVRGEA
Trigger: GGCTTCACCTCTCACTTCAACTTGGGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCCTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473263.1
CDS CCA 90 bp GCATTCTACATGCTTCCTCATTTCCTTTTCTGTAGCCCTTCTCTGTaGCACCTGATGCTACCCATAACTCCTAGCATGACAATGCTCACC +
Preference number: 5 (lower is better)
Translates to: AFYMLPHFLFCSPSL*HLMLPITPSMTMLT
Trigger: GGTGAGCATTGTCATGCTAGGAGTTATGGGTAGCATCAGGTGCCACAGAGAAGGGCTACAGAAAAGGAAATGAGGAAGCATGTAGAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS-3UTR CAA 90 bp ATAGGAAGGATCAGCACCTATTTTGGAGTGAGGAAGCCAATGGAGGTACAACTCGTGAACTCGCTGATGTaGTACACCTTACGGTCGATC +
Preference number: 5 (lower is better)
Translates to: IGRISTYFGVRKPMEVQLVNSLM*YTLRSI
Trigger: GATCGACCGTAAGGTGTACAACATCAGCGAGTTCAC...GAGTTGTACCTCCATTGGCTTCCTCACTCCAAAATAGGTGCTGATCCTTCCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CAA 90 bp GCCCGGCATGAGTGGAATTTTAGTGTTAAATCTCTTCCTGACTCTGGGTTCAGTTTCTTCACAAGGCCCTaGTTGATGTGGAAGGCCACA +
Preference number: 5 (lower is better)
Translates to: ARHEWNFSVKSLPDSGFSFFTRP*LMWKAT
Trigger: TGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAA...ACTGAACCCAGAGTCAGGAAGAGATTTAACACTAAAATTCCACTCATGCCGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CAA 90 bp GAGTTTGAGTCAGAGGCTTTATGTCCCCAAACCCAACCCCCTCTGAGTATTAAATTCTTCACAAGGCCCTaGTTGATGTGGAAGGCCACA +
Preference number: 5 (lower is better)
Translates to: EFESEALCPQTQPPLSIKFFTRP*LMWKAT
Trigger: TGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAA...TTTAATACTCAGAGGGGGTTGGGTTTGGGGACATAAAGCCTCTGACTCAAACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000433932.5
CDS-3UTR CAA 90 bp GAGTTTGAGTCAGAGGCTTTATGTCCCCAAACCCAACCCCCTCTGAGTATTAAACCACTGAACCAGTCATaGAAGGCAGACTTGTGGACA +
Preference number: 5 (lower is better)
Translates to: EFESEALCPQTQPPLSIKPLNQS*KADLWT
Trigger: TGTCCACAAGTCTGCCTTCAATGACTGGTTCAGTGG...TTTAATACTCAGAGGGGGTTGGGTTTGGGGACATAAAGCCTCTGACTCAAACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000460649.5
ENST00000536991.5
CDS-3UTR CAA 90 bp AATAATTTACACCCCTGCCCCAACAGCTCCTTCCCTCCTAGGGACTTCTGTGTCATAAAAGGGAGGAGTTaGAGTCAGAGGCTTTATGTC +
Preference number: 5 (lower is better)
Translates to: NNLHPCPNSSFPPRDFCVIKGRS*SQRLYV
Trigger: GACATAAAGCCTCTGACTCAAACTCCTCCCTTTTAT...GACACAGAAGTCCCTAGGAGGGAAGGAGCTGTTGGGGCAGGGGTGTAAATTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000536991.5
CDS-3UTR CAA 90 bp GAGTTTGAGTCAGAGGCTTTATGTCCCCAAACCCAACCCCCTCTGAGTATTAAATCAGCAGCTCTTTGTTaGCATGGTGCAGCCATTCTC +
Preference number: 5 (lower is better)
Translates to: EFESEALCPQTQPPLSIKSAALC*HGAAIL
Trigger: GAGAATGGCTGCACCATGCAAACAAAGAGCTGCTGA...TTTAATACTCAGAGGGGGTTGGGTTTGGGGACATAAAGCCTCTGACTCAAACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460649.5
CDS-3UTR CAA 90 bp ATAATTTACACCCCTGCCCCAACAGCTCCTTCCCTCCTAGGGACTTCTGTGTCCTTACCTTGGCCCATCTaGACAAAGTTTAAGATAAGG +
Preference number: 5 (lower is better)
Translates to: IIYTPAPTAPSLLGTSVSLPWPI*TKFKIR
Trigger: CCTTATCTTAAACTTTGTCAAGATGGGCCAAGGTAA...GGACACAGAAGTCCCTAGGAGGGAAGGAGCTGTTGGGGCAGGGGTGTAAATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS-3UTR CAA 90 bp GAGTTTGAGTCAGAGGCTTTATGTCCCCAAACCCAACCCCCTCTGAGTATTAAAGAACTATCTGTACCTTaGTTCCTCTGGGGGTTGGAC +
Preference number: 5 (lower is better)
Translates to: EFESEALCPQTQPPLSIKELSVP*FLWGLD
Trigger: GTCCAACCCCCAGAGGAACAAAGGTACAGATAGTTC...TTTAATACTCAGAGGGGGTTGGGTTTGGGGACATAAAGCCTCTGACTCAAACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS TCA 90 bp CTCCAATCAGGAGAGAGTTCATATACTTCTTCACAAGGCCCTTGTTaGTGTGGAAGGCCACAAAGGGATCTTTGGGTTGTGCAAGGTAAG +
Preference number: 5 (lower is better)
Translates to: LQSGESSYTSSQGPC*CGRPQRDLWVVQGK
Trigger: CTTACCTTGCACAACCCAAAGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCCTGATTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545405.5
CDS GCA 90 bp AACTCATCTGTCAGCTCTTTATTCTTGGTGGGCTCAAAGCTGGGCTaGTCTGGAGACAGTTCTCCAATCAGGAGAGAGTTCATATACTTC +
Preference number: 5 (lower is better)
Translates to: NSSVSSLFLVGSKLG*SGDSSPIRREFIYF
Trigger: GAAGTATATGAACTCTCTCCTGATTGGAGAACTGTCTCCAGAGCAGCCCAGCTTTGAGCCCACCAAGAATAAAGAGCTGACAGATGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000350997.12
ENST00000421879.5
ENST00000424501.5
ENST00000433932.5
ENST00000448607.1
ENST00000466716.5
ENST00000539419.5
ENST00000540767.5
ENST00000542506.5
ENST00000544309.5
ENST00000544696.5
ENST00000545245.5
ENST00000545405.5
CDS CCA 90 bp ATCTGTCAGCTCTTTATTCTTGGTGGGCTCAAAGCTGGGCTGCTCTaGAGACAGTTCTCCAATCAGGAGAGAGTTCATATACTTCTTCAC +
Preference number: 5 (lower is better)
Translates to: ICQLFILGGLKAGLL*RQFSNQERVHILLH
Trigger: GTGAAGAAGTATATGAACTCTCTCCTGATTGGAGAACTGTCTCCAGAGCAGCCCAGCTTTGAGCCCACCAAGAATAAAGAGCTGACAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000350997.12
ENST00000421879.5
ENST00000424501.5
ENST00000433932.5
ENST00000448607.1
ENST00000466716.5
ENST00000539419.5
ENST00000540767.5
ENST00000542506.5
ENST00000544309.5
ENST00000544696.5
ENST00000545245.5
ENST00000545405.5
CDS CCA 90 bp ATTCCTGGGCTCAAAGGATGGTCCCACCTCAGTTTCCTTAGTAGCTaGGACAGACTTTTAAAGCTGGGAATATGTGGCAGTCATCAGAAA +
Preference number: 5 (lower is better)
Translates to: IPGLKGWSHLSFLSS*DRLLKLGICGSHQK
Trigger: TTTCTGATGACTGCCACATATTCCCAGCTTTAAAAGTCTGTCCCAGCTACTAAGGAAACTGAGGTGGGACCATCCTTTGAGCCCAGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS-3UTR CAA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGAATAAAAGGGAGGAGTTaGAGTCAGAGGCTTTATGTC +
Preference number: 5 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRIKGRS*SQRLYV
Trigger: GACATAAAGCCTCTGACTCAAACTCCTCCCTTTTAT...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000460649.5
ENST00000536991.5
CDS-3UTR CAA 90 bp ATAGGAAGGATCAGCACCTATTTTGGAGTGAGGAAGCCAATGGAGGTACAACTCGGAGAAAAGACTAACTaGTCCCATCTGCTCACTTGC +
Preference number: 5 (lower is better)
Translates to: IGRISTYFGVRKPMEVQLGEKTN*SHLLTC
Trigger: GCAAGTGAGCAGATGGGACAAGTTAGTCTTTTCTCC...GAGTTGTACCTCCATTGGCTTCCTCACTCCAAAATAGGTGCTGATCCTTCCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CAA 90 bp TTTGGAGTGAGGAAGCCAATGGAGGTACAACTCCTCAATTCTAAGTTTTTGTTGGAGCCTCACTGGTGTTaGCTCAGATTGGGCAGCCTA +
Preference number: 5 (lower is better)
Translates to: FGVRKPMEVQLLNSKFLLEPHWC*LRLGSL
Trigger: TAGGCTGCCCAATCTGAGCAAACACCAGTGAGGCTC...CAACAAAAACTTAGAATTGAGGAGTTGTACCTCCATTGGCTTCCTCACTCCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CAA 90 bp ATAGGAAGGATCAGCACCTATTTTGGAGTGAGGAAGCCAATGGAGGTACAACTCAACATTCCGAGCCTTTaGTCACTGTGTGTCCCTTTG +
Preference number: 5 (lower is better)
Translates to: IGRISTYFGVRKPMEVQLNIPSL*SLCVPL
Trigger: CAAAGGGACACACAGTGACAAAAGGCTCGGAATGTT...GAGTTGTACCTCCATTGGCTTCCTCACTCCAAAATAGGTGCTGATCCTTCCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CAA 90 bp GGCATGAGTGGAATTTTAGTGTTAAATCTCTTCCTGACTCTGGGTTCAGTAGGTTTCACAAGGCCCTTGTaGATGTGGAAGGCCACAAAG +
Preference number: 5 (lower is better)
Translates to: GMSGILVLNLFLTLGSVGFTRPL*MWKATK
Trigger: CTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAA...ACCTACTGAACCCAGAGTCAGGAAGAGATTTAACACTAAAATTCCACTCATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CAA 90 bp ACCCAGGCTGTTTTAAACCTAGTTCTCCAGCTAAGTAAAATGTGCCCAAATGGAAAGAAGGGATGCATGTaGATGTCTGGGTCTTTGCGG +
Preference number: 5 (lower is better)
Translates to: TQAVLNLVLQLSKMCPNGKKGCM*MSGSLR
Trigger: CCGCAAAGACCCAGACATCAACATGCATCCCTTCTT...TCCATTTGGGCACATTTTACTTAGCTGGAGAACTAGGTTTAAAACAGCCTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CAA 90 bp ACCCAGGCTGTTTTAAACCTAGTTCTCCAGCTAAGTAAAATGTGCCCAAATGGACCACTGAACCAGTCATaGAAGGCAGACTTGTGGACA +
Preference number: 5 (lower is better)
Translates to: TQAVLNLVLQLSKMCPNGPLNQS*KADLWT
Trigger: TGTCCACAAGTCTGCCTTCAATGACTGGTTCAGTGG...TCCATTTGGGCACATTTTACTTAGCTGGAGAACTAGGTTTAAAACAGCCTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CAA 90 bp CCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAAACTAGAAAAAGGAAAGTCATATTCCTATGTTaGCTCTCTGGAGAGATGGGC +
Preference number: 5 (lower is better)
Translates to: PGSLCSPTTCMCQTRKRKVIFLC*LSGEMG
Trigger: GCCCATCTCTCCAGAGAGCAAACATAGGAATATGAC...TTTCCTTTTTCTAGTTTGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CAA 90 bp GGCATGAGTGGAATTTTAGTGTTAAATCTCTTCCTGACTCTGGGTTCAGTAGGTACAGAGGGGCCTCTCTaGAAAGAAAACTGGGAGTTG +
Preference number: 5 (lower is better)
Translates to: GMSGILVLNLFLTLGSVGTEGPL*KENWEL
Trigger: CAACTCCCAGTTTTCTTTCAAGAGAGGCCCCTCTGT...ACCTACTGAACCCAGAGTCAGGAAGAGATTTAACACTAAAATTCCACTCATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS TCA 90 bp CTCCAATCAGGAGAGAGTTCATATACTTCTTCACAAGGCCCTTGTTaGTGTGGAAGGCCACAAAGGGATCCTCTAGATACAGAAAAGTTC +
Preference number: 5 (lower is better)
Translates to: LQSGESSYTSSQGPC*CGRPQRDPLDTEKF
Trigger: GAACTTTTCTGTATCTAGAGGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCCTGATTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542506.5
CDS-3UTR CAA 90 bp GTTAGATACTTGAACAAGAGTGGACAGAGTAAGATACCTAGCTACAGCAATAGATGGGCAGGGTGGCTGTaGTTATTGGTGAAGATAGGC +
Preference number: 5 (lower is better)
Translates to: VRYLNKSGQSKIPSYSNRWAGWL*LLVKIG
Trigger: GCCTATCTTCACCAATAACAACAGCCACCCTGCCCA...TCTATTGCTGTAGCTAGGTATCTTACTCTGTCCACTCTTGTTCAAGTATCTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CAA 90 bp GAGTTTGAGTCAGAGGCTTTATGTCCCCAAACCCAACCCCCTCTGAGTATTAAAATAAAAGGGAGGAGTTaGAGTCAGAGGCTTTATGTC +
Preference number: 5 (lower is better)
Translates to: EFESEALCPQTQPPLSIKIKGRS*SQRLYV
Trigger: GACATAAAGCCTCTGACTCAAACTCCTCCCTTTTAT...TTTAATACTCAGAGGGGGTTGGGTTTGGGGACATAAAGCCTCTGACTCAAACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000460649.5
ENST00000536991.5
CDS-3UTR CAA 90 bp CTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAAACTAGAAAAAGGAATAAAAGGGAGGAGTTaGAGTCAGAGGCTTTATGTC +
Preference number: 5 (lower is better)
Translates to: LLVLSVHQLPACAKLEKGIKGRS*SQRLYV
Trigger: GACATAAAGCCTCTGACTCAAACTCCTCCCTTTTAT...TCCTTTTTCTAGTTTGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000536991.5
CDS-3UTR CAA 90 bp CATGAGTGGAATTTTAGTGTTAAATCTCTTCCTGACTCTGGGTTCAGTAGGTCCGTCCCATCTGCTCACTaGCTTATGGAGCTAAAAGAC +
Preference number: 5 (lower is better)
Translates to: HEWNFSVKSLPDSGFSRSVPSAH*LMELKD
Trigger: GTCTTTTAGCTCCATAAGCAAGTGAGCAGATGGGAC...GGACCTACTGAACCCAGAGTCAGGAAGAGATTTAACACTAAAATTCCACTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CAA 90 bp GTATTAAACTATAGTGGCATTGTCCCTCAAGCTCCCCTCTGCCTTGGCTCCAGATCATCAGAAGTTTCCTaGAAAGTAGGTATTGTCTCT +
Preference number: 5 (lower is better)
Translates to: VLNYSGIVPQAPLCLGSRSSEVS*KVGIVS
Trigger: AGAGACAATACCTACTTTCAAGGAAACTTCTGATGA...TCTGGAGCCAAGGCAGAGGGGAGCTTGAGGGACAATGCCACTATAGTTTAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460649.5
CDS-3UTR CAA 90 bp CTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAAACTAGAAAAAGGAATGGGAAGAACTAGTTaGCCTTCAACCAATCATCAG +
Preference number: 5 (lower is better)
Translates to: LLVLSVHQLPACAKLEKGMGRTS*PSTNHQ
Trigger: CTGATGATTGGTTGAAGGCAAACTAGTTCTTCCCAT...TCCTTTTTCTAGTTTGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS-3UTR CAA 90 bp GTTAGATACTTGAACAAGAGTGGACAGAGTAAGATACCTAGCTACAGCAATAGATATGCCCAAAGCTACTaGGCTAAACAGGCTGGTGAC +
Preference number: 5 (lower is better)
Translates to: VRYLNKSGQSKIPSYSNRYAQSY*AKQAGD
Trigger: GTCACCAGCCTGTTTAGCCAAGTAGCTTTGGGCATA...TCTATTGCTGTAGCTAGGTATCTTACTCTGTCCACTCTTGTTCAAGTATCTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CAA 90 bp TCTGTTACCCTCCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAAACTAAAAGAAAACTGGGAGTaGAAGAAGTGTTGCATTCTA +
Preference number: 5 (lower is better)
Translates to: SVTLLVLSVHQLPACAKLKENWE*KKCCIL
Trigger: TAGAATGCAACACTTCTTCAACTCCCAGTTTTCTTT...TAGTTTGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGGAGGGTAACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS-3UTR CAA 90 bp CCTGGTTCTCTCTGTTCACCAACTACCTGCATGTGCCAAACTAGAAAAAGGAAAAGAAGAGTTAGATACTaGAACAAGAGTGGACAGAGT +
Preference number: 5 (lower is better)
Translates to: PGSLCSPTTCMCQTRKRKRRVRY*NKSGQS
Trigger: ACTCTGTCCACTCTTGTTCAAGTATCTAACTCTTCT...TTTCCTTTTTCTAGTTTGGCACATGCAGGTAGTTGGTGAACAGAGAGAACCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS-3UTR CAA 90 bp ACCCAGGCTGTTTTAAACCTAGTTCTCCAGCTAAGTAAAATGTGCCCAAATGGATATCTGTCAGTGGATTaGAGATCACTCATTTTACCA +
Preference number: 5 (lower is better)
Translates to: TQAVLNLVLQLSKMCPNGYLSVD*RSLILP
Trigger: TGGTAAAATGAGTGATCTCAAATCCACTGACAGATA...TCCATTTGGGCACATTTTACTTAGCTGGAGAACTAGGTTTAAAACAGCCTGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS CAA 90 bp CAGCACCGCAGGGCAGACCGGCGGGCCTCGCAGCGCGCGTTCCCATaGGCCGAGCCTCGTGGCGCGGGGAGCGAGATCCCGTCCCCCGGT +
Preference number: 6 (lower is better)
Translates to: QHRRADRRASQRAFP*AEPRGAGSEIPSPG
Trigger: ACCGGGGGACGGGATCTCGCTCCCCGCGCCACGAGGCTCGGCCAATGGGAACGCGCGCTGCGAGGCCCGCCGGTCTGCCCTGCGGTGCTG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS CCA 72 bp GGGCAGACCGGCGGGCCTCGCAGCGCGCGTTCCCATTaGCCGAGCCTCGTGGCGCGGGGAGCGAGATCCCGT +
Preference number: 6 (lower is better)
Translates to: GQTGGPRSARSH*PSLVARGARSR
Trigger: ACGGGATCTCGCTCCCCGCGCCACGAGGCTCGGCCAATGGGAACGCGCGCTGCGAGGCCCGCCGGTCTGCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS CAA 72 bp AGGGCAGACCGGCGGGCCTCGCAGCGCGCGTTCCCATaGGCCGAGCCTCGTGGCGCGGGGAGCGAGATCCCG +
Preference number: 6 (lower is better)
Translates to: RADRRASQRAFP*AEPRGAGSEIP
Trigger: CGGGATCTCGCTCCCCGCGCCACGAGGCTCGGCCAATGGGAACGCGCGCTGCGAGGCCCGCCGGTCTGCCCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS GCA 72 bp AGTGGATTTGCTGGCGCGCGCCCAGAGCCAGCCGCCTaGGCGCCGGGTTTTCAGCACCGCAGGGCAGACCGG +
Preference number: 6 (lower is better)
Translates to: SGFAGARPEPAA*APGFQHRRADR
Trigger: CCGGTCTGCCCTGCGGTGCTGAAAACCCGGCGCGCAGGCGGCTGGCTCTGGGCGCGCGCCAGCAAATCCACT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350997.12
CDS CCA 72 bp GTTGACCCGCGCAAGCTCTGGCCTCGCCCACTAGGCTaGTCGCGTCAGAGGGTGGGGCGGGTCTTCGCCCCG +
Preference number: 6 (lower is better)
Translates to: VDPRKLWPRPLG*SRQRVGRVFAP
Trigger: CGGGGCGAAGACCCGCCCCACCCTCTGACGCGACCAGCCTAGTGGGCGAGGCCAGAGCTTGCGCGGGTCAAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541683.1
CDS CAA 72 bp GATGTGGAAGGCCACAAAGGGATCGCCAGCGGCCGCTaGCCCTCCCCGGCCAGCGCTGTCCCTTCCGCGTCC +
Preference number: 6 (lower is better)
Translates to: DVEGHKGIASGR*PSPASAVPSAS
Trigger: GGACGCGGAAGGGACAGCGCTGGCCGGGGAGGGCAAGCGGCCGCTGGCGATCCCTTTGTGGCCTTCCACATC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544696.5
CDS CAA 90 bp TGGTGCCTGTTTCGTCTGCGCATGCGCCGGGACACGCCTGCGCCCTaGGCCGCAGTCAGGGCTCCCGAGTGGTCACTCTGGTTGACCCGC +
Preference number: 6 (lower is better)
Translates to: WCLFRLRMRRDTPAP*AAVRAPEWSLWLTR
Trigger: GCGGGTCAACCAGAGTGACCACTCGGGAGCCCTGACTGCGGCCAAGGGCGCAGGCGTGTCCCGGCGCATGCGCAGACGAAACAGGCACCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541683.1
CDS GCA 72 bp ACTGCGGGAAGCTCCAGCGTTGGTGCCTGTTTCGTCTaGGCATGCGCCGGGACACGCCTGCGCCCTTGGCCG +
Preference number: 6 (lower is better)
Translates to: TAGSSSVGACFV*ACAGTRLRPWP
Trigger: CGGCCAAGGGCGCAGGCGTGTCCCGGCGCATGCGCAGACGAAACAGGCACCAACGCTGGAGCTTCCCGCAGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541683.1
CDS GCA 72 bp ATGTGGAAGGCCACAAAGGGATCGCCAGCGGCCGCTTaGCCTCCCCGGCCAGCGCTGTCCCTTCCGCGTCCT +
Preference number: 6 (lower is better)
Translates to: MWKATKGSPAAA*PPRPALSLPRP
Trigger: AGGACGCGGAAGGGACAGCGCTGGCCGGGGAGGGCAAGCGGCCGCTGGCGATCCCTTTGTGGCCTTCCACAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544696.5
CDS CCA 72 bp ACGCCTGCGCCCTTGGCCGCAGTCAGGGCTCCCGAGTaGTCACTCTGGTTGACCCGCGCAAGCTCTGGCCTC +
Preference number: 6 (lower is better)
Translates to: TPAPLAAVRAPE*SLWLTRASSGL
Trigger: GAGGCCAGAGCTTGCGCGGGTCAACCAGAGTGACCACTCGGGAGCCCTGACTGCGGCCAAGGGCGCAGGCGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541683.1
CDS CCA 72 bp TTCGTCTGCGCATGCGCCGGGACACGCCTGCGCCCTTaGCCGCAGTCAGGGCTCCCGAGTGGTCACTCTGGT +
Preference number: 6 (lower is better)
Translates to: FVCACAGTRLRP*PQSGLPSGHSG
Trigger: ACCAGAGTGACCACTCGGGAGCCCTGACTGCGGCCAAGGGCGCAGGCGTGTCCCGGCGCATGCGCAGACGAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541683.1
CDS CAA 72 bp TTTCGTCTGCGCATGCGCCGGGACACGCCTGCGCCCTaGGCCGCAGTCAGGGCTCCCGAGTGGTCACTCTGG +
Preference number: 6 (lower is better)
Translates to: FRLRMRRDTPAP*AAVRAPEWSLW
Trigger: CCAGAGTGACCACTCGGGAGCCCTGACTGCGGCCAAGGGCGCAGGCGTGTCCCGGCGCATGCGCAGACGAAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541683.1
CDS TCA 72 bp TGGCCGCAGTCAGGGCTCCCGAGTGGTCACTCTGGTTaGCCCGCGCAAGCTCTGGCCTCGCCCACTAGGCTG +
Preference number: 6 (lower is better)
Translates to: WPQSGLPSGHSG*PAQALASPTRL
Trigger: CAGCCTAGTGGGCGAGGCCAGAGCTTGCGCGGGTCAACCAGAGTGACCACTCGGGAGCCCTGACTGCGGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541683.1
CDS GCA 72 bp GCCATTCCCAATCCCTTATGTACGCCAGCGGCCGCTTaGCCTCCCCGGCCAGCGCTGTCCCTTCCGCGTCCT +
Preference number: 6 (lower is better)
Translates to: AIPNPLCTPAAA*PPRPALSLPRP
Trigger: AGGACGCGGAAGGGACAGCGCTGGCCGGGGAGGGCAAGCGGCCGCTGGCGTACATAAGGGATTGGGAATGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473263.1
ENST00000541683.1
CDS GCA 72 bp GGAAGCTCCAGCGTTGGTGCCTGTTTCGTCTGCGCATaGGCCGGGACACGCCTGCGCCCTTGGCCGCAGTCA +
Preference number: 6 (lower is better)
Translates to: GSSSVGACFVCA*AGTRLRPWPQS
Trigger: TGACTGCGGCCAAGGGCGCAGGCGTGTCCCGGCGCATGCGCAGACGAAACAGGCACCAACGCTGGAGCTTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541683.1
CDS CCA 72 bp GGCTCCCCGTGGGCCAAACAGACCTCCGGCGCTGAATaGAGCTTGGGACGTCCCCAAGCTCGAGCCGGCCTT +
Preference number: 6 (lower is better)
Translates to: GSPWAKQTSGAE*SLGRPQARAGL
Trigger: AAGGCCGGCTCGAGCTTGGGGACGTCCCAAGCTCCATTCAGCGCCGGAGGTCTGTTTGGCCCACGGGGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448607.1
CDS CCA 72 bp ATTCGACTTCCTGACGTCAGGCGGGCATCGCGGCGTTaGCTCCCAGGGGGCGCCGCGGTAGGAACAGCGGTT +
Preference number: 6 (lower is better)
Translates to: IRLPDVRRASRR*LPGGAAVGTAV
Trigger: AACCGCTGTTCCTACCGCGGCGCCCCCTGGGAGCCAACGCCGCGATGCCCGCCTGACGTCAGGAAGTCGAAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544309.5
CDS CAA 72 bp TGCCATTCCCAATCCCTTATGTACGCCAGCGGCCGCTaGCCCTCCCCGGCCAGCGCTGTCCCTTCCGCGTCC +
Preference number: 6 (lower is better)
Translates to: CHSQSLMYASGR*PSPASAVPSAS
Trigger: GGACGCGGAAGGGACAGCGCTGGCCGGGGAGGGCAAGCGGCCGCTGGCGTACATAAGGGATTGGGAATGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473263.1
ENST00000541683.1
CDS CCA 72 bp CTGCCCGGCGTAGTGGCTGATGACCCGGGAGCCCCCTaGATGCCGGCGGGTGAACTCGCTGATGTTGTACAC +
Preference number: 6 (lower is better)
Translates to: LPGVVADDPGAP*MPAGELADVVH
Trigger: GTGTACAACATCAGCGAGTTCACCCGCCGGCATCCAGGGGGCTCCCGGGTCATCAGCCACTACGCCGGGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000424501.5
ENST00000491310.5
CDS CCA 72 bp GAGCCGGCCTTCTTGGGGACCGGCGTCCGGGATTGGTaGAAGGAGAACGGCCTGGGGTTTGCAAAGCCCAGG +
Preference number: 6 (lower is better)
Translates to: EPAFLGTGVRDW*KENGLGFAKPR
Trigger: CCTGGGCTTTGCAAACCCCAGGCCGTTCTCCTTCCACCAATCCCGGACGCCGGTCCCCAAGAAGGCCGGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000421879.5
ENST00000448607.1
CDS CCA 72 bp CTCGAGCCGGCCTTCTTGGGGACCGGCGTCCGGGATTaGTGGAAGGAGAACGGCCTGGGGTTTGCAAAGCCC +
Preference number: 6 (lower is better)
Translates to: LEPAFLGTGVRD*WKENGLGFAKP
Trigger: GGGCTTTGCAAACCCCAGGCCGTTCTCCTTCCACCAATCCCGGACGCCGGTCCCCAAGAAGGCCGGCTCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000421879.5
ENST00000448607.1
CDS CCA 72 bp GGGCACTACGCTGGAGAAGATGCAACGGTAAGGGTCTaGGGGCGCCCCAGCCACCCTTCTCTGCTGCAGGCG +
Preference number: 6 (lower is better)
Translates to: GHYAGEDATVRV*GRPSHPSLLQA
Trigger: CGCCTGCAGCAGAGAAGGGTGGCTGGGGCGCCCCCAGACCCTTACCGTTGCATCTTCTCCAGCGTAGTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448607.1
CDS CCA 72 bp TCCCGAGTGGTCACTCTGGTTGACCCGCGCAAGCTCTaGCCTCGCCCACTAGGCTGGTCGCGTCAGAGGGTG +
Preference number: 6 (lower is better)
Translates to: SRVVTLVDPRKL*PRPLGWSRQRV
Trigger: CACCCTCTGACGCGACCAGCCTAGTGGGCGAGGCCAGAGCTTGCGCGGGTCAACCAGAGTGACCACTCGGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541683.1
CDS CAA 72 bp GCTCGAGCCGGCCTTCTTGGGGACCGGCGTCCGGGATaGGTGGAAGGAGAACGGCCTGGGGTTTGCAAAGCC +
Preference number: 6 (lower is better)
Translates to: ARAGLLGDRRPG*VEGERPGVCKA
Trigger: GGCTTTGCAAACCCCAGGCCGTTCTCCTTCCACCAATCCCGGACGCCGGTCCCCAAGAAGGCCGGCTCGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000421879.5
ENST00000448607.1
CDS CCA 72 bp GCCACAAAGGGATCCCCAAGCTCGAGCCGGCCTTCTTaGGGACCGGCGTCCGGGATTGGTGGAAGGAGAACG +
Preference number: 6 (lower is better)
Translates to: ATKGSPSSSRPS*GPASGIGGRRT
Trigger: CGTTCTCCTTCCACCAATCCCGGACGCCGGTCCCCAAGAAGGCCGGCTCGAGCTTGGGGATCCCTTTGTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421879.5
CDS CCA 72 bp TCTGCTGCAGGCGGAGTCAGGATCCCTGGCTCCCCGTaGGCCAAACAGACCTCCGGCGCTGAATGGAGCTTG +
Preference number: 6 (lower is better)
Translates to: SAAGGVRIPGSP*AKQTSGAEWSL
Trigger: CAAGCTCCATTCAGCGCCGGAGGTCTGTTTGGCCCACGGGGAGCCAGGGATCCTGACTCCGCCTGCAGCAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448607.1
CDS CCA 72 bp TTCGCCCCGCAGCGTCTAAGCTCTGCTGCGACGTTATaGGAACCTGGTGACCCGCGGCACACTCTGGGACGC +
Preference number: 6 (lower is better)
Translates to: FAPQRLSSAATL*EPGDPRHTLGR
Trigger: GCGTCCCAGAGTGTGCCGCGGGTCACCAGGTTCCCATAACGTCGCAGCAGAGCTTAGACGCTGCGGGGCGAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541683.1
CDS TCA 72 bp CCAGGGAAGGTGAGGGGTGCGAGTGGCACTCTTCAGTaGCAGGTGCTTGGGAACTCAGGCCCCACGCATGGG +
Preference number: 6 (lower is better)
Translates to: PGKVRGASGTLQ*QVLGNSGPTHG
Trigger: CCCATGCGTGGGGCCTGAGTTCCCAAGCACCTGTCACTGAAGAGTGCCACTCGCACCCCTCACCTTCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS GCA 72 bp CGTTTCAGCCCCATCCTCGAGAATGGGCTCCTTTCCTaGTCCCTCTCCGCTCCTGCTGGCGAGTGGAGACCG +
Preference number: 6 (lower is better)
Translates to: RFSPILENGLLS*SLSAPAGEWRP
Trigger: CGGTCTCCACTCGCCAGCAGGAGCGGAGAGGGAGCAGGAAAGGAGCCCATTCTCGAGGATGGGGCTGAAACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433932.5
ENST00000473263.1
ENST00000541683.1
ENST00000544696.5
CDS GCA 72 bp GCAGGAGAATGGCGTGAACCCGGGAAGCGGAGAGCTTaGAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAG +
Preference number: 6 (lower is better)
Translates to: AGEWREPGKRRA*SEPRLRHCSPQ
Trigger: CTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCTCCGCTTCCCGGGTTCACGCCATTCTCCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS CCA 72 bp CGACGTTATGGGAACCTGGTGACCCGCGGCACACTCTaGGACGCCAGGGTAGTGGATAGGGACAGTGGAGGG +
Preference number: 6 (lower is better)
Translates to: RRYGNLVTRGTL*DARVVDRDSGG
Trigger: CCCTCCACTGTCCCTATCCACTACCCTGGCGTCCCAGAGTGTGCCGCGGGTCACCAGGTTCCCATAACGTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541683.1
CDS CAA 90 bp ATGACCCGGGAGCCCCCTGGATGCCGGCGGGTGAACTCGCTGATGTaGTACACCTTACGGTCGATCACTAGCCACCGCTCCTCGCACCCT +
Preference number: 6 (lower is better)
Translates to: MTREPPGCRRVNSLM*YTLRSITSHRSSHP
Trigger: AGGGTGCGAGGAGCGGTGGCTAGTGATCGACCGTAAGGTGTACAACATCAGCGAGTTCACCCGCCGGCATCCAGGGGGCTCCCGGGTCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000424501.5
ENST00000491310.5
CDS CAA 90 bp CTAAGTGTATGCCATTCCCAATCCCTTATGTACGCCAGCGGCCGCTaGCCCTCCCCGGCCAGCGCTGTCCCTTCCGCGTCCTCCAGTCTT +
Preference number: 6 (lower is better)
Translates to: LSVCHSQSLMYASGR*PSPASAVPSASSSL
Trigger: AAGACTGGAGGACGCGGAAGGGACAGCGCTGGCCGGGGAGGGCAAGCGGCCGCTGGCGTACATAAGGGATTGGGAATGGCATACACTTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473263.1
ENST00000541683.1
CDS TCA 72 bp GCAGGTACAGCAGGAAGAAGACATGGTTGGCCTTCATaGGCCCCATCCGCTCCACTGTGGCCCGCAGCTCCC +
Preference number: 6 (lower is better)
Translates to: AGTAGRRHGWPS*APSAPLWPAAP
Trigger: GGGAGCTGCGGGCCACAGTGGAGCGGATGGGGCTCATGAAGGCCAACCATGTCTTCTTCCTGCTGTACCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000350997.12
ENST00000421879.5
ENST00000424501.5
ENST00000433932.5
ENST00000466716.5
ENST00000491310.5
ENST00000539419.5
ENST00000540767.5
ENST00000542506.5
ENST00000544309.5
ENST00000544696.5
ENST00000545245.5
ENST00000545405.5
CDS CCA 72 bp AGGCCACAAAGGGATCCTGAGGCTCGGGGCTGCAGATaGAATGCACGGCAGGGAGGCGGGACCCTTTGTTTG +
Preference number: 6 (lower is better)
Translates to: RPQRDPEARGCR*NARQGGGTLCL
Trigger: CAAACAAAGGGTCCCGCCTCCCTGCCGTGCATTCCATCTGCAGCCCCGAGCCTCAGGATCCCTTTGTGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540767.5
CDS CAA 72 bp GAGCCCCCTGGATGCCGGCGGGTGAACTCGCTGATGTaGTACACCTTACGGTCGATCACTAGCCACCGCTCC +
Preference number: 6 (lower is better)
Translates to: EPPGCRRVNSLM*YTLRSITSHRS
Trigger: GGAGCGGTGGCTAGTGATCGACCGTAAGGTGTACAACATCAGCGAGTTCACCCGCCGGCATCCAGGGGGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350997.12
ENST00000424501.5
ENST00000491310.5
CDS TCA 72 bp CCGGCCACCTTGGCCTCCCAAAGTGCTGAACTGCACTaGGCAGCACCGCACAGAGGAGGAAGGGCAAAAAGG +
Preference number: 6 (lower is better)
Translates to: PATLASQSAELH*AAPHRGGRAKR
Trigger: CCTTTTTGCCCTTCCTCCTCTGTGCGGTGCTGCTCAGTGCAGTTCAGCACTTTGGGAGGCCAAGGTGGCCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424501.5
CDS CCA 72 bp GGCTCAGTGGCCTCCCCGGCGATTCGAGAACAGCTCTaGGGGTCCTCGCTAAGTGTATGCCATTCCCAATCC +
Preference number: 6 (lower is better)
Translates to: GSVASPAIREQL*GSSLSVCHSQS
Trigger: GGATTGGGAATGGCATACACTTAGCGAGGACCCCCAGAGCTGTTCTCGAATCGCCGGGGAGGCCACTGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473263.1
ENST00000541683.1
CDS GCA 72 bp GCTGACAGCAGGGGCTTGGACTGGTACTCTATGCCATaGTTGGCACACAAGGACTGCACCAGGGGAGCCACT +
Preference number: 6 (lower is better)
Translates to: ADSRGLDWYSMP*LAHKDCTRGAT
Trigger: AGTGGCTCCCCTGGTGCAGTCCTTGTGTGCCAAGCATGGCATAGAGTACCAGTCCAAGCCCCTGCTGTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000460649.5
ENST00000536991.5
ENST00000542506.5
CDS GCA 72 bp GGACTCCGGCAGTGTTCGCACCAAAGGCCATCCTCCTaGCCGCCAGAAGGCTGTACCCAAGTTGAAGTGAGA +
Preference number: 6 (lower is better)
Translates to: GLRQCSHQRPSS*PPEGCTQVEVR
Trigger: TCTCACTTCAACTTGGGTACAGCCTTCTGGCGGGCAGGAGGATGGCCTTTGGTGCGAACACTGCCGGAGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466716.5
CDS CAA 72 bp AGATGGAATGCACGGCAGGGAGGCGGGACCCTTTGTTaGTGTGTGCGTGTTGTTGGCCTCCATCCCCACTCC +
Preference number: 6 (lower is better)
Translates to: RWNARQGGGTLC*CVRVVGLHPHS
Trigger: GGAGTGGGGATGGAGGCCAACAACACGCACACACAAACAAAGGGTCCCGCCTCCCTGCCGTGCATTCCATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540767.5
CDS CAA 90 bp TACTTTGGGTTGTGCAAGGTAAGGTCCATGGCGATAAGATTCACGTaGGCAGGTCCGGCAGCCCCGGGCCCTGTAAGTGATGCGGCGTGT +
Preference number: 6 (lower is better)
Translates to: YFGLCKVRSMAIRFT*AGPAAPGPVSDAAC
Trigger: ACACGCCGCATCACTTACAGGGCCCGGGGCTGCCGGACCTGCCAACGTGAATCTTATCGCCATGGACCTTACCTTGCACAACCCAAAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541683.1
ENST00000542506.5
CDS TCA 72 bp CCTCCTGCCCGCCAGAAGGCTGTACCCAAGTTGAAGTaGGAGGTGAAGCCAGATGGACTTCCTGGGTCGAGT +
Preference number: 6 (lower is better)
Translates to: PPARQKAVPKLK*EVKPDGLPGSS
Trigger: ACTCGACCCAGGAAGTCCATCTGGCTTCACCTCTCACTTCAACTTGGGTACAGCCTTCTGGCGGGCAGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466716.5
CDS GCA 72 bp GCCTCTTCCAACCATCCCTTCTGTCTCCCCTCCAGGTaGTTGAGTGCTCTGCAATCCACTGGAACCAGCAGG +
Preference number: 6 (lower is better)
Translates to: ASSNHPFCLPSR*LSALQSTGTSR
Trigger: CCTGCTGGTTCCAGTGGATTGCAGAGCACTCAAGCACCTGGAGGGGAGACAGAAGGGATGGTTGGAAGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS CAA 72 bp GACAGCAGGGGCTTGGACTGGTACTCTATGCCATGCTaGGCACACAAGGACTGCACCAGGGGAGCCACTTTG +
Preference number: 6 (lower is better)
Translates to: DSRGLDWYSMPC*AHKDCTRGATL
Trigger: CAAAGTGGCTCCCCTGGTGCAGTCCTTGTGTGCCAAGCATGGCATAGAGTACCAGTCCAAGCCCCTGCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000460649.5
ENST00000536991.5
ENST00000542506.5
CDS CAA 90 bp CCTAAGCACTCTGGCCACCCCCTGCCCCAAGGCAGCTACTTTGGGTaGTGCAAGGTAAGGTCCATGGCGATAAGATTCACGTTGGCAGGT +
Preference number: 6 (lower is better)
Translates to: PKHSGHPLPQGSYFG*CKVRSMAIRFTLAG
Trigger: ACCTGCCAACGTGAATCTTATCGCCATGGACCTTACCTTGCACAACCCAAAGTAGCTGCCTTGGGGCAGGGGGTGGCCAGAGTGCTTAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000541683.1
ENST00000542506.5
ENST00000545245.5
CDS GCA 72 bp ATTCGAGAACAGCTCTGGGGGTCCTCGCTAAGTGTATaGCATTCCCAATCCCTTATGTACGCCAGCGGCCGC +
Preference number: 6 (lower is better)
Translates to: IREQLWGSSLSV*HSQSLMYASGR
Trigger: GCGGCCGCTGGCGTACATAAGGGATTGGGAATGGCATACACTTAGCGAGGACCCCCAGAGCTGTTCTCGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473263.1
ENST00000541683.1
CDS GCA 72 bp GAGGAAGACTTCCCTACGTCCGAACTGGGGCACTTCTaGGTTTCTTCCCTTTCCCTCCACCGTTGTTCTGGG +
Preference number: 6 (lower is better)
Translates to: EEDFPTSELGHF*VSSLSLHRCSG
Trigger: CCCAGAACAACGGTGGAGGGAAAGGGAAGAAACGCAGAAGTGCCCCAGTTCGGACGTAGGGAAGTCTTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539419.5
ENST00000541683.1
ENST00000542506.5
CDS GCA 72 bp GGCCACCCCCTGCCCCAAGGCAGCTACTTTGGGTTGTaGAAGGTAAGGTCCATGGCGATAAGATTCACGTTG +
Preference number: 6 (lower is better)
Translates to: GHPLPQGSYFGL*KVRSMAIRFTL
Trigger: CAACGTGAATCTTATCGCCATGGACCTTACCTTGCACAACCCAAAGTAGCTGCCTTGGGGCAGGGGGTGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000541683.1
ENST00000542506.5
ENST00000545245.5
CDS GCA 72 bp AAGGCCACAAAGGGATCGTCCGAACTGGGGCACTTCTaGGTTTCTTCCCTTTCCCTCCACCGTTGTTCTGGG +
Preference number: 6 (lower is better)
Translates to: KATKGSSELGHF*VSSLSLHRCSG
Trigger: CCCAGAACAACGGTGGAGGGAAAGGGAAGAAACGCAGAAGTGCCCCAGTTCGGACGATCCCTTTGTGGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545245.5
CDS CCA 72 bp GCACTCTGGCCACCCCCTGCCCCAAGGCAGCTACTTTaGGTTGTGCAAGGTAAGGTCCATGGCGATAAGATT +
Preference number: 6 (lower is better)
Translates to: ALWPPPAPRQLL*VVQGKVHGDKI
Trigger: AATCTTATCGCCATGGACCTTACCTTGCACAACCCAAAGTAGCTGCCTTGGGGCAGGGGGTGGCCAGAGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539419.5
ENST00000541683.1
ENST00000542506.5
ENST00000545245.5
CDS CAA 72 bp TTGTGCAAGGTAAGGTCCATGGCGATAAGATTCACGTaGGCAGGTCCGGCAGCCCCGGGCCCTGTAAGTGAT +
Preference number: 6 (lower is better)
Translates to: LCKVRSMAIRFT*AGPAAPGPVSD
Trigger: ATCACTTACAGGGCCCGGGGCTGCCGGACCTGCCAACGTGAATCTTATCGCCATGGACCTTACCTTGCACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541683.1
ENST00000542506.5
CDS CAA 72 bp TCTGGCCACCCCCTGCCCCAAGGCAGCTACTTTGGGTaGTGCAAGGTAAGGTCCATGGCGATAAGATTCACG +
Preference number: 6 (lower is better)
Translates to: SGHPLPQGSYFG*CKVRSMAIRFT
Trigger: CGTGAATCTTATCGCCATGGACCTTACCTTGCACAACCCAAAGTAGCTGCCTTGGGGCAGGGGGTGGCCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000541683.1
ENST00000542506.5
ENST00000545245.5
CDS GCA 72 bp CATCTTCCCCATTCCCAACTCAGCCCCCTGGCATTATaGCCAGTACAAGAACCTCTGGAGACACTGACCGCA +
Preference number: 6 (lower is better)
Translates to: HLPHSQLSPLAL*PVQEPLETLTA
Trigger: TGCGGTCAGTGTCTCCAGAGGTTCTTGTACTGGGCATAATGCCAGGGGGCTGAGTTGGGAATGGGGAAGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460649.5
CDS CCA 72 bp GAGTTCATATACTTCTTCACAAGGCCCTTGTTGATGTaGAAGGCCACAAAGGGATCCCTCCCCGGCCAGCGC +
Preference number: 6 (lower is better)
Translates to: EFIYFFTRPLLM*KATKGSLPGQR
Trigger: GCGCTGGCCGGGGAGGGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433932.5
CDS CCA 72 bp CTTCTGCGTTTCTTCCCTTTCCCTCCACCGTTGTTCTaGGTAGGGCTCCACATTTCCCTAAGCACTCTGGCC +
Preference number: 6 (lower is better)
Translates to: LLRFFPFPPPLF*VGLHISLSTLA
Trigger: GGCCAGAGTGCTTAGGGAAATGTGGAGCCCTACCCAGAACAACGGTGGAGGGAAAGGGAAGAAACGCAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539419.5
ENST00000541683.1
ENST00000542506.5
ENST00000545245.5
CDS CCA 72 bp ACAGCCTGTAAGGGAACTGGAGCGGGTTGCAGCAGCTaGCTGGGGTGGCCAGCTTTTATTGTCTTAGTTGTC +
Preference number: 6 (lower is better)
Translates to: TACKGTGAGCSS*LGWPAFIVLVV
Trigger: GACAACTAAGACAATAAAAGCTGGCCACCCCAGCCAGCTGCTGCAACCCGCTCCAGTTCCCTTACAGGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541683.1
CDS CAA 90 bp AGTATAGGTGAGAAACAGGAGAGATGGGTGGGGCTGTGTCGGGCGTaGGTTCCTTCCGGCGGGTATGGTCTCACTGACTTCAAGAATGGA +
Preference number: 6 (lower is better)
Translates to: SIGEKQERWVGLCRA*VPSGGYGLTDFKNG
Trigger: TCCATTCTTGAAGTCAGTGAGACCATACCCGCCGGAAGGAACCAACGCCCGACACAGCCCCACCCATCTCTCCTGTTTCTCACCTATACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541683.1
ENST00000545986.1
CDS CAA 90 bp CCTGCCTGGGCTGGCCTTTCCCCTGGGTGTGTCCACAGACAGCTTTaGCCCAAGAATTTCAGTATAGGTGAGAAACAGGAGAGATGGGTG +
Preference number: 6 (lower is better)
Translates to: PAWAGLSPGCVHRQL*PKNFSIGEKQERWV
Trigger: CACCCATCTCTCCTGTTTCTCACCTATACTGAAATTCTTGGGCAAAAGCTGTCTGTGGACACACCCAGGGGAAAGGCCAGCCCAGGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541683.1
ENST00000545986.1
CDS TCA 72 bp GGAGAGAGTTCATATACTTCTTCACAAGGCCCTTGTTaGTGTGGAAGGCCACAAAGGGATCCCTCCCCGGCC +
Preference number: 6 (lower is better)
Translates to: GESSYTSSQGPC*CGRPQRDPSPA
Trigger: GGCCGGGGAGGGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433932.5
CDS TCA 72 bp GGAGAGAGTTCATATACTTCTTCACAAGGCCCTTGTTaGTGTGGAAGGCCACAAAGGGATCGCCAGCGGCCG +
Preference number: 6 (lower is better)
Translates to: GESSYTSSQGPC*CGRPQRDRQRP
Trigger: CGGCCGCTGGCGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544696.5
CDS CCA 72 bp CCTTCAGCATGCCGCCAAATGAATCTGCCAGGACCATaGCTCAGTCCATGCCAGTGCCCTGATCAAATCTCT +
Preference number: 6 (lower is better)
Translates to: PSACRQMNLPGP*LSPCQCPDQIS
Trigger: AGAGATTTGATCAGGGCACTGGCATGGACTGAGCCATGGTCCTGGCAGATTCATTTGGCGGCATGCTGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460649.5
CDS CCA 72 bp AAAACCACGAAGAGGAAGACTTCCCTACGTCCGAACTaGGGCACTTCTGCGTTTCTTCCCTTTCCCTCCACC +
Preference number: 6 (lower is better)
Translates to: KTTKRKTSLRPN*GTSAFLPFPST
Trigger: GGTGGAGGGAAAGGGAAGAAACGCAGAAGTGCCCCAGTTCGGACGTAGGGAAGTCTTCCTCTTCGTGGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539419.5
ENST00000541683.1
ENST00000542506.5
CDS CCA 72 bp CCCATCCTTCCAGAACTATCTGTACCTTTGTTCCTCTaGGGGTTGGACTGGGCTCTACCAGGTTACCTTGGC +
Preference number: 6 (lower is better)
Translates to: PILPELSVPLFL*GLDWALPGYLG
Trigger: GCCAAGGTAACCTGGTAGAGCCCAGTCCAACCCCCAGAGGAACAAAGGTACAGATAGTTCTGGAAGGATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS CCA 72 bp GAGTTCATATACTTCTTCACAAGGCCCTTGTTGATGTaGAAGGCCACAAAGGGATCGCCAGCGGCCGCTTGC +
Preference number: 6 (lower is better)
Translates to: EFIYFFTRPLLM*KATKGSPAAAC
Trigger: GCAAGCGGCCGCTGGCGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544696.5
CDS CAA 72 bp GTTGGACTGGGCTCTACCAGGTTACCTTGGCCCATCTaGACAAAGTTTAAGATAAGGTTGAGGGGCCGGGCG +
Preference number: 6 (lower is better)
Translates to: VGLGSTRLPWPI*TKFKIRLRGRA
Trigger: CGCCCGGCCCCTCAACCTTATCTTAAACTTTGTCAAGATGGGCCAAGGTAACCTGGTAGAGCCCAGTCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS CAA 90 bp TCTCCAATCAGGAGAGAGTTCATATACTTCTTCACAAGGCCCTTGTaGATGTGGAAGGCCACAAAGGGATCCGTGGCATCCTGCCCGGCG +
Preference number: 6 (lower is better)
Translates to: SPIRREFIYFFTRPL*MWKATKGSVASCPA
Trigger: CGCCGGGCAGGATGCCACGGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCCTGATTGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000424501.5
CDS CAA 90 bp TCTCCAATCAGGAGAGAGTTCATATACTTCTTCACAAGGCCCTTGTaGATGTGGAAGGCCACAAAGGGATCCCTCCCCGGCCAGCGCTGT +
Preference number: 6 (lower is better)
Translates to: SPIRREFIYFFTRPL*MWKATKGSLPGQRC
Trigger: ACAGCGCTGGCCGGGGAGGGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCCTGATTGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433932.5
CDS CAA 90 bp AGTTCTCCAATCAGGAGAGAGTTCATATACTTCTTCACAAGGCCCTaGTTGATGTGGAAGGCCACAAAGGGATCCCTCCCCGGCCAGCGC +
Preference number: 6 (lower is better)
Translates to: SSPIRREFIYFFTRP*LMWKATKGSLPGQR
Trigger: GCGCTGGCCGGGGAGGGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCCTGATTGGAGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433932.5
CDS CAA 90 bp TCTCCAATCAGGAGAGAGTTCATATACTTCTTCACAAGGCCCTTGTaGATGTGGAAGGCCACAAAGGGATCGCCAGCGGCCGCTTGCCCT +
Preference number: 6 (lower is better)
Translates to: SPIRREFIYFFTRPL*MWKATKGSPAAACP
Trigger: AGGGCAAGCGGCCGCTGGCGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCCTGATTGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544696.5
CDS CCA 72 bp GAGTTCATATACTTCTTCACAAGGCCCTTGTTGATGTaGAAGGCCACAAAGGGATCCGTGGCATCCTGCCCG +
Preference number: 6 (lower is better)
Translates to: EFIYFFTRPLLM*KATKGSVASCP
Trigger: CGGGCAGGATGCCACGGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000424501.5
CDS CCA 72 bp GAGTTCATATACTTCTTCACAAGGCCCTTGTTGATGTaGAAGGCCACAAAGGGATCCCCAAGCTCGAGCCGG +
Preference number: 6 (lower is better)
Translates to: EFIYFFTRPLLM*KATKGSPSSSR
Trigger: CCGGCTCGAGCTTGGGGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421879.5
CDS CAA 72 bp AGGAGAGAGTTCATATACTTCTTCACAAGGCCCTTGTaGATGTGGAAGGCCACAAAGGGATCCCTCCCCGGC +
Preference number: 6 (lower is better)
Translates to: RREFIYFFTRPL*MWKATKGSLPG
Trigger: GCCGGGGAGGGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433932.5
CDS CAA 72 bp AGGAGAGAGTTCATATACTTCTTCACAAGGCCCTTGTaGATGTGGAAGGCCACAAAGGGATCGCCAGCGGCC +
Preference number: 6 (lower is better)
Translates to: RREFIYFFTRPL*MWKATKGSPAA
Trigger: GGCCGCTGGCGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544696.5
CDS CAA 90 bp TCTCCAATCAGGAGAGAGTTCATATACTTCTTCACAAGGCCCTTGTaGATGTGGAAGGCCACAAAGGGATCCCCAAGCTCGAGCCGGCCT +
Preference number: 6 (lower is better)
Translates to: SPIRREFIYFFTRPL*MWKATKGSPSSSRP
Trigger: AGGCCGGCTCGAGCTTGGGGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCCTGATTGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421879.5
CDS CAA 90 bp AGTTCTCCAATCAGGAGAGAGTTCATATACTTCTTCACAAGGCCCTaGTTGATGTGGAAGGCCACAAAGGGATCGCCAGCGGCCGCTTGC +
Preference number: 6 (lower is better)
Translates to: SSPIRREFIYFFTRP*LMWKATKGSPAAAC
Trigger: GCAAGCGGCCGCTGGCGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCCTGATTGGAGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544696.5
CDS CAA 90 bp AGTTCTCCAATCAGGAGAGAGTTCATATACTTCTTCACAAGGCCCTaGTTGATGTGGAAGGCCACAAAGGGATCCGTGGCATCCTGCCCG +
Preference number: 6 (lower is better)
Translates to: SSPIRREFIYFFTRP*LMWKATKGSVASCP
Trigger: CGGGCAGGATGCCACGGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCCTGATTGGAGAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000424501.5
CDS CAA 90 bp AGTTCTCCAATCAGGAGAGAGTTCATATACTTCTTCACAAGGCCCTaGTTGATGTGGAAGGCCACAAAGGGATCCCCAAGCTCGAGCCGG +
Preference number: 6 (lower is better)
Translates to: SSPIRREFIYFFTRP*LMWKATKGSPSSSR
Trigger: CCGGCTCGAGCTTGGGGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCCTGATTGGAGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421879.5
CDS CAA 90 bp TCTCCAATCAGGAGAGAGTTCATATACTTCTTCACAAGGCCCTTGTaGATGTGGAAGGCCACAAAGGGATCAGCTGGGCTGCCAACACGC +
Preference number: 6 (lower is better)
Translates to: SPIRREFIYFFTRPL*MWKATKGSAGLPTR
Trigger: GCGTGTTGGCAGCCCAGCTGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCCTGATTGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544309.5
CDS TCA 72 bp GGAGAGAGTTCATATACTTCTTCACAAGGCCCTTGTTaGTGTGGAAGGCCACAAAGGGATCCTGAGGCTCGG +
Preference number: 6 (lower is better)
Translates to: GESSYTSSQGPC*CGRPQRDPEAR
Trigger: CCGAGCCTCAGGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540767.5
CDS TCA 72 bp GGAGAGAGTTCATATACTTCTTCACAAGGCCCTTGTTaGTGTGGAAGGCCACAAAGGGATCAGCTGGGCTGC +
Preference number: 6 (lower is better)
Translates to: GESSYTSSQGPC*CGRPQRDQLGC
Trigger: GCAGCCCAGCTGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544309.5
CDS CCA 72 bp CATCTGTCAGCTCTTTATTCTTGGTGGGCTCAAAGCTaGGCTGCTCTGGAGACAGTTCTCCAATCAGGAGAG +
Preference number: 6 (lower is better)
Translates to: HLSALYSWWAQS*AALETVLQSGE
Trigger: CTCTCCTGATTGGAGAACTGTCTCCAGAGCAGCCCAGCTTTGAGCCCACCAAGAATAAAGAGCTGACAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000350997.12
ENST00000421879.5
ENST00000424501.5
ENST00000433932.5
ENST00000448607.1
ENST00000466716.5
ENST00000539419.5
ENST00000540767.5
ENST00000542506.5
ENST00000544309.5
ENST00000544696.5
ENST00000545245.5
ENST00000545405.5
CDS CCA 72 bp TTCCAGAACTATCTGTACCTTTGTTCCTCTGGGGGTTaGACTGGGCTCTACCAGGTTACCTTGGCCCATCTT +
Preference number: 6 (lower is better)
Translates to: FQNYLYLCSSGG*TGLYQVTLAHL
Trigger: AAGATGGGCCAAGGTAACCTGGTAGAGCCCAGTCCAACCCCCAGAGGAACAAAGGTACAGATAGTTCTGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS CCA 72 bp GAGTTCATATACTTCTTCACAAGGCCCTTGTTGATGTaGAAGGCCACAAAGGGATCGTCCGAACTGGGGCAC +
Preference number: 6 (lower is better)
Translates to: EFIYFFTRPLLM*KATKGSSELGH
Trigger: GTGCCCCAGTTCGGACGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545245.5
CDS CAA 72 bp GGAGGTCAGCTGTGGGACGGAACAGAGGGGCCTCTCTaGAAAGAAAACTGGGAGTTGAAGAAGTGTTGCATT +
Preference number: 6 (lower is better)
Translates to: GGQLWDGTEGPL*KENWELKKCCI
Trigger: AATGCAACACTTCTTCAACTCCCAGTTTTCTTTCAAGAGAGGCCCCTCTGTTCCGTCCCACAGCTGACCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS CAA 90 bp TCTCCAATCAGGAGAGAGTTCATATACTTCTTCACAAGGCCCTTGTaGATGTGGAAGGCCACAAAGGGATCCTGCAAGTGCCGGGAGAAG +
Preference number: 6 (lower is better)
Translates to: SPIRREFIYFFTRPL*MWKATKGSCKCREK
Trigger: CTTCTCCCGGCACTTGCAGGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCCTGATTGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466716.5
CDS CAA 90 bp AGTTCTCCAATCAGGAGAGAGTTCATATACTTCTTCACAAGGCCCTaGTTGATGTGGAAGGCCACAAAGGGATCCTGCAAGTGCCGGGAG +
Preference number: 6 (lower is better)
Translates to: SSPIRREFIYFFTRP*LMWKATKGSCKCRE
Trigger: CTCCCGGCACTTGCAGGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCCTGATTGGAGAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466716.5
CDS CAA 90 bp TCTCCAATCAGGAGAGAGTTCATATACTTCTTCACAAGGCCCTTGTaGATGTGGAAGGCCACAAAGGGATCGTCCGAACTGGGGCACTTC +
Preference number: 6 (lower is better)
Translates to: SPIRREFIYFFTRPL*MWKATKGSSELGHF
Trigger: GAAGTGCCCCAGTTCGGACGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCCTGATTGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545245.5
CDS CAA 90 bp AGTTCTCCAATCAGGAGAGAGTTCATATACTTCTTCACAAGGCCCTaGTTGATGTGGAAGGCCACAAAGGGATCGTCCGAACTGGGGCAC +
Preference number: 6 (lower is better)
Translates to: SSPIRREFIYFFTRP*LMWKATKGSSELGH
Trigger: GTGCCCCAGTTCGGACGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCCTGATTGGAGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545245.5
CDS TCA 72 bp GGAGAGAGTTCATATACTTCTTCACAAGGCCCTTGTTaGTGTGGAAGGCCACAAAGGGATCCGTGGCATCCT +
Preference number: 6 (lower is better)
Translates to: GESSYTSSQGPC*CGRPQRDPWHP
Trigger: AGGATGCCACGGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000424501.5
CDS TCA 72 bp TGGAGCTGGGTGGAAACCCAGTCCATGTTCCGGTCATaGTCAATGTGCATGGGAATATGGTTCATCTGTGTC +
Preference number: 6 (lower is better)
Translates to: WSWVETQSMFRS*SMCMGIWFICV
Trigger: GACACAGATGAACCATATTCCCATGCACATTGATCATGACCGGAACATGGACTGGGTTTCCACCCAGCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000350997.12
ENST00000433932.5
ENST00000460649.5
ENST00000496123.6
ENST00000536991.5
ENST00000542506.5
CDS TCA 72 bp GGAGAGAGTTCATATACTTCTTCACAAGGCCCTTGTTaGTGTGGAAGGCCACAAAGGGATCCCCAAGCTCGA +
Preference number: 6 (lower is better)
Translates to: GESSYTSSQGPC*CGRPQRDPQAR
Trigger: TCGAGCTTGGGGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421879.5
CDS TCA 72 bp GGAGAGAGTTCATATACTTCTTCACAAGGCCCTTGTTaGTGTGGAAGGCCACAAAGGGATCCTTCAGCTGGG +
Preference number: 6 (lower is better)
Translates to: GESSYTSSQGPC*CGRPQRDPSAG
Trigger: CCCAGCTGAAGGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448607.1
CDS TCA 72 bp TGCCCAGTACAAGAACCTCTGGAGACACTGACCGCATaGAATTACACATTGGGAATCAGGCTGCCTGCTAAG +
Preference number: 6 (lower is better)
Translates to: CPVQEPLETLTA*NYTLGIRLPAK
Trigger: CTTAGCAGGCAGCCTGATTCCCAATGTGTAATTTCATGCGGTCAGTGTCTCCAGAGGTTCTTGTACTGGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460649.5
CDS TCA 72 bp AGTCCATGCCAGTGCCCTGATCAAATCTCTCATCACTaGACCAAGCACCATACTCTTCCCCTGACACTAGTC +
Preference number: 6 (lower is better)
Translates to: SPCQCPDQISHH*TKHHTLPLTLV
Trigger: GACTAGTGTCAGGGGAAGAGTATGGTGCTTGGTTCAGTGATGAGAGATTTGATCAGGGCACTGGCATGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460649.5
CDS TCA 72 bp GGAGAGAGTTCATATACTTCTTCACAAGGCCCTTGTTaGTGTGGAAGGCCACAAAGGGATCCTGCAAGTGCC +
Preference number: 6 (lower is better)
Translates to: GESSYTSSQGPC*CGRPQRDPASA
Trigger: GGCACTTGCAGGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466716.5
CDS TCA 72 bp GGAGAGAGTTCATATACTTCTTCACAAGGCCCTTGTTaGTGTGGAAGGCCACAAAGGGATCGTCCGAACTGG +
Preference number: 6 (lower is better)
Translates to: GESSYTSSQGPC*CGRPQRDRPNW
Trigger: CCAGTTCGGACGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545245.5
CDS CCA 72 bp ACTCTTCCTCTTCCTCTCAGCAGCTCTTTGTTTGCATaGTGCAGCCATTCTCCTGGTTATCCAGACTCACTC +
Preference number: 6 (lower is better)
Translates to: TLPLPLSSSLFA*CSHSPGYPDSL
Trigger: GAGTGAGTCTGGATAACCAGGAGAATGGCTGCACCATGCAAACAAAGAGCTGCTGAGAGGAAGAGGAAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460649.5
CDS CCA 72 bp GAGTTCATATACTTCTTCACAAGGCCCTTGTTGATGTaGAAGGCCACAAAGGGATCAGCTGGGCTGCCAACA +
Preference number: 6 (lower is better)
Translates to: EFIYFFTRPLLM*KATKGSAGLPT
Trigger: TGTTGGCAGCCCAGCTGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544309.5
CDS CAA 72 bp AGGAGAGAGTTCATATACTTCTTCACAAGGCCCTTGTaGATGTGGAAGGCCACAAAGGGATCCCCAAGCTCG +
Preference number: 6 (lower is better)
Translates to: RREFIYFFTRPL*MWKATKGSPSS
Trigger: CGAGCTTGGGGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421879.5
CDS CAA 72 bp ATCAGGAGAGAGTTCATATACTTCTTCACAAGGCCCTaGTTGATGTGGAAGGCCACAAAGGGATCCCTCCCC +
Preference number: 6 (lower is better)
Translates to: IRREFIYFFTRP*LMWKATKGSLP
Trigger: GGGGAGGGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433932.5
CDS CAA 72 bp AGGAGAGAGTTCATATACTTCTTCACAAGGCCCTTGTaGATGTGGAAGGCCACAAAGGGATCAGCTGGGCTG +
Preference number: 6 (lower is better)
Translates to: RREFIYFFTRPL*MWKATKGSAGL
Trigger: CAGCCCAGCTGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544309.5
CDS CAA 72 bp ATCAGGAGAGAGTTCATATACTTCTTCACAAGGCCCTaGTTGATGTGGAAGGCCACAAAGGGATCGCCAGCG +
Preference number: 6 (lower is better)
Translates to: IRREFIYFFTRP*LMWKATKGSPA
Trigger: CGCTGGCGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCCTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544696.5
CDS CAA 90 bp AGTTCTCCAATCAGGAGAGAGTTCATATACTTCTTCACAAGGCCCTaGTTGATGTGGAAGGCCACAAAGGGATCCTTCAGCTGGGAGGAG +
Preference number: 6 (lower is better)
Translates to: SSPIRREFIYFFTRP*LMWKATKGSFSWEE
Trigger: CTCCTCCCAGCTGAAGGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCCTGATTGGAGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448607.1
CDS CAA 90 bp AGTTCTCCAATCAGGAGAGAGTTCATATACTTCTTCACAAGGCCCTaGTTGATGTGGAAGGCCACAAAGGGATCAGCTGGGCTGCCAACA +
Preference number: 6 (lower is better)
Translates to: SSPIRREFIYFFTRP*LMWKATKGSAGLPT
Trigger: TGTTGGCAGCCCAGCTGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCCTGATTGGAGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544309.5
CDS TCA 72 bp TGGCATTATGCCCAGTACAAGAACCTCTGGAGACACTaGCCGCATGAAATTACACATTGGGAATCAGGCTGC +
Preference number: 6 (lower is better)
Translates to: WHYAQYKNLWRH*PHEITHWESGC
Trigger: GCAGCCTGATTCCCAATGTGTAATTTCATGCGGTCAGTGTCTCCAGAGGTTCTTGTACTGGGCATAATGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460649.5
CDS CCA 72 bp AGATTCAGAAGCATAACCTGCGCACCGACAGGTGGCTaGTCATTGACCGCAAGGTTTACAACATCACCAAAT +
Preference number: 6 (lower is better)
Translates to: RFRSITCAPTGG*SLTARFTTSPN
Trigger: ATTTGGTGATGTTGTAAACCTTGCGGTCAATGACCAGCCACCTGTCGGTGCGCAGGTTATGCTTCTGAATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448607.1
CDS CCA 72 bp TCTTCCCCTGACACTAGTCCTCCACAATATGTCTGGTaGTCAAACTTACCCCTCATTTCCAGCTTCTCTGCT +
Preference number: 6 (lower is better)
Translates to: SSPDTSPPQYVW*SNLPLISSFSA
Trigger: AGCAGAGAAGCTGGAAATGAGGGGTAAGTTTGACCACCAGACATATTGTGGAGGACTAGTGTCAGGGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460649.5
CDS CCA 72 bp TGGGACGGAACAGAGGGGCCTCTCTTGAAAGAAAACTaGGAGTTGAAGAAGTGTTGCATTCTACATGCTTCC +
Preference number: 6 (lower is better)
Translates to: WDGTEGPLLKEN*ELKKCCILHAS
Trigger: GGAAGCATGTAGAATGCAACACTTCTTCAACTCCCAGTTTTCTTTCAAGAGAGGCCCCTCTGTTCCGTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS CAA 72 bp ATCAGGAGAGAGTTCATATACTTCTTCACAAGGCCCTaGTTGATGTGGAAGGCCACAAAGGGATCCGTGGCA +
Preference number: 6 (lower is better)
Translates to: IRREFIYFFTRP*LMWKATKGSVA
Trigger: TGCCACGGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCCTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350997.12
ENST00000424501.5
CDS CAA 72 bp ATCAGGAGAGAGTTCATATACTTCTTCACAAGGCCCTaGTTGATGTGGAAGGCCACAAAGGGATCCCCAAGC +
Preference number: 6 (lower is better)
Translates to: IRREFIYFFTRP*LMWKATKGSPS
Trigger: GCTTGGGGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421879.5
CDS CAA 72 bp AGGAGAGAGTTCATATACTTCTTCACAAGGCCCTTGTaGATGTGGAAGGCCACAAAGGGATCCTTCAGCTGG +
Preference number: 6 (lower is better)
Translates to: RREFIYFFTRPL*MWKATKGSFSW
Trigger: CCAGCTGAAGGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448607.1
CDS CAA 72 bp AGGAGAGAGTTCATATACTTCTTCACAAGGCCCTTGTaGATGTGGAAGGCCACAAAGGGATCCTGCAAGTGC +
Preference number: 6 (lower is better)
Translates to: RREFIYFFTRPL*MWKATKGSCKC
Trigger: GCACTTGCAGGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466716.5
CDS CAA 72 bp ATCAGGAGAGAGTTCATATACTTCTTCACAAGGCCCTaGTTGATGTGGAAGGCCACAAAGGGATCAGCTGGG +
Preference number: 6 (lower is better)
Translates to: IRREFIYFFTRP*LMWKATKGSAG
Trigger: CCCAGCTGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCCTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544309.5
CDS CAA 72 bp AGGAGAGAGTTCATATACTTCTTCACAAGGCCCTTGTaGATGTGGAAGGCCACAAAGGGATCGTCCGAACTG +
Preference number: 6 (lower is better)
Translates to: RREFIYFFTRPL*MWKATKGSSEL
Trigger: CAGTTCGGACGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545245.5
CDS CAA 90 bp TCTCCAATCAGGAGAGAGTTCATATACTTCTTCACAAGGCCCTTGTaGATGTGGAAGGCCACAAAGGGATCCTTCAGCTGGGAGGAGATT +
Preference number: 6 (lower is better)
Translates to: SPIRREFIYFFTRPL*MWKATKGSFSWEEI
Trigger: AATCTCCTCCCAGCTGAAGGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCCTGATTGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448607.1
CDS CAA 90 bp TTCTTGCATGTCCCCTTCAAAAGTACCAAGGCCTACAAGGTCTCTTaGCCTCTAGCTCTTCCTAGCCAATCTAAATCCTTCAGCATGCCG +
Preference number: 6 (lower is better)
Translates to: FLHVPFKSTKAYKVS*PLALPSQSKSFSMP
Trigger: CGGCATGCTGAAGGATTTAGATTGGCTAGGAAGAGCTAGAGGCAAAGAGACCTTGTAGGCCTTGGTACTTTTGAAGGGGACATGCAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460649.5
CDS CAA 90 bp AGTTCTCCAATCAGGAGAGAGTTCATATACTTCTTCACAAGGCCCTaGTTGATGTGGAAGGCCACAAAGGGATCCTCTCAGGGCTATGAG +
Preference number: 6 (lower is better)
Translates to: SSPIRREFIYFFTRP*LMWKATKGSSQGYE
Trigger: CTCATAGCCCTGAGAGGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCCTGATTGGAGAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539419.5
CDS CAA 90 bp TCTCCAATCAGGAGAGAGTTCATATACTTCTTCACAAGGCCCTTGTaGATGTGGAAGGCCACAAAGGGATCCCAAGTTGAAGTGAGAGGT +
Preference number: 6 (lower is better)
Translates to: SPIRREFIYFFTRPL*MWKATKGSQVEVRG
Trigger: ACCTCTCACTTCAACTTGGGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCCTGATTGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473263.1
CDS CAA 90 bp AGTTCTCCAATCAGGAGAGAGTTCATATACTTCTTCACAAGGCCCTaGTTGATGTGGAAGGCCACAAAGGGATCTTTGGGTTGTGCAAGG +
Preference number: 6 (lower is better)
Translates to: SSPIRREFIYFFTRP*LMWKATKGSLGCAR
Trigger: CCTTGCACAACCCAAAGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCCTGATTGGAGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545405.5
CDS TCA 72 bp GGAGAGAGTTCATATACTTCTTCACAAGGCCCTTGTTaGTGTGGAAGGCCACAAAGGGATCCCAAGTTGAAG +
Preference number: 6 (lower is better)
Translates to: GESSYTSSQGPC*CGRPQRDPKLK
Trigger: CTTCAACTTGGGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473263.1
CDS TCA 72 bp GGAGAGAGTTCATATACTTCTTCACAAGGCCCTTGTTaGTGTGGAAGGCCACAAAGGGATCTTTGGGTTGTG +
Preference number: 6 (lower is better)
Translates to: GESSYTSSQGPC*CGRPQRDLWVV
Trigger: CACAACCCAAAGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545405.5
CDS CCA 72 bp CTCTTTATTCTTGGTGGGCTCAAAGCTGGGCTGCTCTaGAGACAGTTCTCCAATCAGGAGAGAGTTCATATA +
Preference number: 6 (lower is better)
Translates to: LFILGGLKAGLL*RQFSNQERVHI
Trigger: TATATGAACTCTCTCCTGATTGGAGAACTGTCTCCAGAGCAGCCCAGCTTTGAGCCCACCAAGAATAAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000350997.12
ENST00000421879.5
ENST00000424501.5
ENST00000433932.5
ENST00000448607.1
ENST00000466716.5
ENST00000539419.5
ENST00000540767.5
ENST00000542506.5
ENST00000544309.5
ENST00000544696.5
ENST00000545245.5
ENST00000545405.5
CDS CCA 72 bp TACTCTTCCCCTGACACTAGTCCTCCACAATATGTCTaGTGGTCAAACTTACCCCTCATTTCCAGCTTCTCT +
Preference number: 6 (lower is better)
Translates to: YSSPDTSPPQYV*WSNLPLISSFS
Trigger: AGAGAAGCTGGAAATGAGGGGTAAGTTTGACCACCAGACATATTGTGGAGGACTAGTGTCAGGGGAAGAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460649.5
CDS CCA 72 bp CTCAAAGGATGGTCCCACCTCAGTTTCCTTAGTAGCTaGGACAGACTTTTAAAGCTGGGAATATGTGGCAGT +
Preference number: 6 (lower is better)
Translates to: LKGWSHLSFLSS*DRLLKLGICGS
Trigger: ACTGCCACATATTCCCAGCTTTAAAAGTCTGTCCCAGCTACTAAGGAAACTGAGGTGGGACCATCCTTTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS CCA 72 bp ATGCTTCCTCATTTCCTTTTCTGTAGCCCTTCTCTGTaGCACCTGATGCTACCCATAACTCCTAGCATGACA +
Preference number: 6 (lower is better)
Translates to: MLPHFLFCSPSL*HLMLPITPSMT
Trigger: TGTCATGCTAGGAGTTATGGGTAGCATCAGGTGCCACAGAGAAGGGCTACAGAAAAGGAAATGAGGAAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS CCA 72 bp GAGTTCATATACTTCTTCACAAGGCCCTTGTTGATGTaGAAGGCCACAAAGGGATCTTTGGGTTGTGCAAGG +
Preference number: 6 (lower is better)
Translates to: EFIYFFTRPLLM*KATKGSLGCAR
Trigger: CCTTGCACAACCCAAAGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545405.5
CDS CAA 72 bp ATCAGGAGAGAGTTCATATACTTCTTCACAAGGCCCTaGTTGATGTGGAAGGCCACAAAGGGATCCTTCAGC +
Preference number: 6 (lower is better)
Translates to: IRREFIYFFTRP*LMWKATKGSFS
Trigger: GCTGAAGGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCCTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448607.1
CDS CAA 72 bp ATCAGGAGAGAGTTCATATACTTCTTCACAAGGCCCTaGTTGATGTGGAAGGCCACAAAGGGATCCTGCAAG +
Preference number: 6 (lower is better)
Translates to: IRREFIYFFTRP*LMWKATKGSCK
Trigger: CTTGCAGGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCCTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466716.5
CDS CAA 72 bp ATCAGGAGAGAGTTCATATACTTCTTCACAAGGCCCTaGTTGATGTGGAAGGCCACAAAGGGATCCTCTCAG +
Preference number: 6 (lower is better)
Translates to: IRREFIYFFTRP*LMWKATKGSSQ
Trigger: CTGAGAGGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCCTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539419.5
CDS CAA 72 bp ATCAGGAGAGAGTTCATATACTTCTTCACAAGGCCCTaGTTGATGTGGAAGGCCACAAAGGGATCGTCCGAA +
Preference number: 6 (lower is better)
Translates to: IRREFIYFFTRP*LMWKATKGSSE
Trigger: TTCGGACGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCCTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545245.5
CDS CAA 90 bp AGTTCTCCAATCAGGAGAGAGTTCATATACTTCTTCACAAGGCCCTaGTTGATGTGGAAGGCCACAAAGGGATCCCAAGTTGAAGTGAGA +
Preference number: 6 (lower is better)
Translates to: SSPIRREFIYFFTRP*LMWKATKGSQVEVR
Trigger: TCTCACTTCAACTTGGGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCCTGATTGGAGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473263.1
CDS CAA 72 bp AGGAGAGAGTTCATATACTTCTTCACAAGGCCCTTGTaGATGTGGAAGGCCACAAAGGGATCCCAAGTTGAA +
Preference number: 6 (lower is better)
Translates to: RREFIYFFTRPL*MWKATKGSQVE
Trigger: TTCAACTTGGGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473263.1
CDS CAA 72 bp ATCAGGAGAGAGTTCATATACTTCTTCACAAGGCCCTaGTTGATGTGGAAGGCCACAAAGGGATCCCAAGTT +
Preference number: 6 (lower is better)
Translates to: IRREFIYFFTRP*LMWKATKGSQV
Trigger: AACTTGGGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCCTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473263.1
CDS CAA 72 bp ATCAGGAGAGAGTTCATATACTTCTTCACAAGGCCCTaGTTGATGTGGAAGGCCACAAAGGGATCCTCTAGA +
Preference number: 6 (lower is better)
Translates to: IRREFIYFFTRP*LMWKATKGSSR
Trigger: TCTAGAGGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCCTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542506.5
CDS CAA 72 bp AGGAGAGAGTTCATATACTTCTTCACAAGGCCCTTGTaGATGTGGAAGGCCACAAAGGGATCTTTGGGTTGT +
Preference number: 6 (lower is better)
Translates to: RREFIYFFTRPL*MWKATKGSLGC
Trigger: ACAACCCAAAGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545405.5
CDS CAA 72 bp ATCAGGAGAGAGTTCATATACTTCTTCACAAGGCCCTaGTTGATGTGGAAGGCCACAAAGGGATCTTTGGGT +
Preference number: 6 (lower is better)
Translates to: IRREFIYFFTRP*LMWKATKGSLG
Trigger: ACCCAAAGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCCTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545405.5
CDS CAA 72 bp GGAACAGAGGGGCCTCTCTTGAAAGAAAACTGGGAGTaGAAGAAGTGTTGCATTCTACATGCTTCCTCATTT +
Preference number: 6 (lower is better)
Translates to: GTEGPLLKENWE*KKCCILHASSF
Trigger: AAATGAGGAAGCATGTAGAATGCAACACTTCTTCAACTCCCAGTTTTCTTTCAAGAGAGGCCCCTCTGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536991.5
CDS CAA 90 bp TCTCCAATCAGGAGAGAGTTCATATACTTCTTCACAAGGCCCTTGTaGATGTGGAAGGCCACAAAGGGATCCTCTAGATACAGAAAAGTT +
Preference number: 6 (lower is better)
Translates to: SPIRREFIYFFTRPL*MWKATKGSSRYRKV
Trigger: AACTTTTCTGTATCTAGAGGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCCTGATTGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542506.5
CDS CAA 90 bp AGTTCTCCAATCAGGAGAGAGTTCATATACTTCTTCACAAGGCCCTaGTTGATGTGGAAGGCCACAAAGGGATCCTCTAGATACAGAAAA +
Preference number: 6 (lower is better)
Translates to: SSPIRREFIYFFTRP*LMWKATKGSSRYRK
Trigger: TTTTCTGTATCTAGAGGATCCCTTTGTGGCCTTCCACATCAACAAGGGCCTTGTGAAGAAGTATATGAACTCTCTCCTGATTGGAGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542506.5