Pregenerated sensors for FABP7 (Homo sapiens)
Ensembl gene IDs: ENSG00000164434Ensembl transcript IDs: ENST00000356535.4
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCGTACAAGGACTATGTAAAGCATTCTCACACCCTCCTCCAAAATTaGATGAGCCTACCCACCTATGTCAGTATCATCAATATACCATTG | + |
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Preference number: 1 (lower is better) Translates to: SYKDYVKHSHTLLQN*MSLPTYVSIINIPL Trigger: CAATGGTATATTGATGATACTGACATAGGTGGGTAGGCTCATTCAATTTTGGAGGAGGGTGTGAGAATGCTTTACATAGTCCTTGTACGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000356535.4 |
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| 3UTR-3UTR TCA 90 bp | CATCCGGGAAGTAGGAAGAAGCAAGGGAGGGGGCCCGCAGAAGGATGGCAACACAAGCAGAGGTTGCAGTaGGCCAAGAATGCACCCCCT | + |
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Preference number: 2 (lower is better) Translates to: HPGSRKKQGRGPAEGWQHKQRLQ*AKNAPP Trigger: AGGGGGTGCATTCTTGGCTCACTGCAACCTCTGCTT...GTGTTGCCATCCTTCTGCGGGCCCCCTCCCTTGCTTCTTCCTACTTCCCGGATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000356535.4 |
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| 3UTR-3UTR CCA 90 bp | CATCCGGGAAGTAGGAAGAAGCAAGGGAGGGGGCCCGCAGAAGGATGGCAACACGAAGTAACATCAAAATaGTTCTCTTTGGGGGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: HPGSRKKQGRGPAEGWQHEVTSK*FSLGAG Trigger: CCCAGCCCCCAAAGAGAACCATTTTGATGTTACTTC...GTGTTGCCATCCTTCTGCGGGCCCCCTCCCTTGCTTCTTCCTACTTCCCGGATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000356535.4 |
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| 3UTR CAA 90 bp | AGCAAGGGAGGGGGCCCGCAGAAGGATGGCAACACTAGGGTCGCCTaGATCTCAGGCGTCCAGCTTTCAGAACTGAGAAAATTCATTTCT | + |
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Preference number: 2 (lower is better) Translates to: SKGGGPQKDGNTRVA*ISGVQLSELRKFIS Trigger: AGAAATGAATTTTCTCAGTTCTGAAAGCTGGACGCCTGAGATCAAGGCGACCCTAGTGTTGCCATCCTTCTGCGGGCCCCCTCCCTTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000356535.4 |
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| 3UTR-3UTR TCA 90 bp | CTGGAAAGAAGTAACATCAAAATGGTTCTCTTTGGGGGCTGGGAGCCTTGGCTCGGTTGTAGAATCGCTTaGGCCCATGAAGCAGAGGTT | + |
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Preference number: 2 (lower is better) Translates to: LERSNIKMVLFGGWEPWLGCRIA*AHEAEV Trigger: AACCTCTGCTTCATGGGCTCAAGCGATTCTACAACC...GAGCCAAGGCTCCCAGCCCCCAAAGAGAACCATTTTGATGTTACTTCTTTCCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000356535.4 |
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| 3UTR-3UTR TCA 90 bp | GCCACCAAGTTTGTGGTACTTTGTTGTGGCAGCCTTAGGACACTAATAAATCCTAATCGCTTGAGCCCATaGAGCAGAGGTTGCAGTGAG | + |
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Preference number: 2 (lower is better) Translates to: ATKFVVLCCGSLRTLINPNRLSP*SRGCSE Trigger: CTCACTGCAACCTCTGCTTCATGGGCTCAAGCGATT...AGGATTTATTAGTGTCCTAAGGCTGCCACAACAAAGTACCACAAACTTGGTGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000356535.4 |
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| 3UTR-3UTR CCA 90 bp | AGGAAACATGAGTCCCCATTCTTAAACAACAAAACTTTCTCTGCTGTCATCGTAGTTCTCTTTGGGGGCTaGGAGCCTTGGCTCAGGCCT | + |
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Preference number: 2 (lower is better) Translates to: RKHESPFLNNKTFSAVIVVLFGG*EPWLRP Trigger: AGGCCTGAGCCAAGGCTCCCAGCCCCCAAAGAGAAC...TACGATGACAGCAGAGAAAGTTTTGTTGTTTAAGAATGGGGACTCATGTTTCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000356535.4 |
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| 3UTR-3UTR CCA 90 bp | AGGAAACATGAGTCCCCATTCTTAAACAACAAAACTTTCTCTGCTGTCATCGTAAGCTGTAGGCCAGCCTaGGCAACATGGCGAAATCCC | + |
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Preference number: 2 (lower is better) Translates to: RKHESPFLNNKTFSAVIVSCRPA*ATWRNP Trigger: GGGATTTCGCCATGTTGCCCAGGCTGGCCTACAGCT...TACGATGACAGCAGAGAAAGTTTTGTTGTTTAAGAATGGGGACTCATGTTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000356535.4 |
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| 3UTR-3UTR GCA 90 bp | AGGAAACATGAGTCCCCATTCTTAAACAACAAAACTTTCTCTGCTGTCATCGTACAAGAATGCACCCCCTaGACTCCAGTCTGGGTGACA | + |
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Preference number: 2 (lower is better) Translates to: RKHESPFLNNKTFSAVIVQECTP*TPVWVT Trigger: TGTCACCCAGACTGGAGTGCAGGGGGTGCATTCTTG...TACGATGACAGCAGAGAAAGTTTTGTTGTTTAAGAATGGGGACTCATGTTTCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000356535.4 |
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| 3UTR-3UTR CCA 90 bp | TTAGGACAAAAACAGAGGAAAAAGTCTTGTAAAGATGGAGTCAGAAATGGATCATTAGCCCGGCGTTGGTaGCTTGCACCTGTGGTCCCA | + |
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Preference number: 2 (lower is better) Translates to: LGQKQRKKSCKDGVRNGSLARRW*LAPVVP Trigger: TGGGACCACAGGTGCAAGCCACCAACGCCGGGCTAA...TGATCCATTTCTGACTCCATCTTTACAAGACTTTTTCCTCTGTTTTTGTCCTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000356535.4 |
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| 3UTR CAA 90 bp | ATCGTACAAGGACTATGTAAAGCATTCTCACACCCTCCTCCAAAATaGAATGAGCCTACCCACCTATGTCAGTATCATCAATATACCATT | + |
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Preference number: 2 (lower is better) Translates to: IVQGLCKAFSHPPPK*NEPTHLCQYHQYTI Trigger: AATGGTATATTGATGATACTGACATAGGTGGGTAGGCTCATTCAATTTTGGAGGAGGGTGTGAGAATGCTTTACATAGTCCTTGTACGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000356535.4 |
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| 3UTR-3UTR TCA 90 bp | AGGAAACATGAGTCCCCATTCTTAAACAACAAAACTTTCTCTGCTGTCATCGTATCCAGCTTTCAGAACTaGGAAAATTCATTTCTGTTG | + |
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Preference number: 2 (lower is better) Translates to: RKHESPFLNNKTFSAVIVSSFQN*ENSFLL Trigger: CAACAGAAATGAATTTTCTCAGTTCTGAAAGCTGGA...TACGATGACAGCAGAGAAAGTTTTGTTGTTTAAGAATGGGGACTCATGTTTCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000356535.4 |
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| 3UTR-3UTR CAA 90 bp | CATCCGGGAAGTAGGAAGAAGCAAGGGAGGGGGCCCGCAGAAGGATGGCAACACGGCGGGAGCATCACTTaGAGCTCAAGAGCTGTAGGC | + |
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Preference number: 3 (lower is better) Translates to: HPGSRKKQGRGPAEGWQHGGSIT*SSRAVG Trigger: GCCTACAGCTCTTGAGCTCAAAGTGATGCTCCCGCC...GTGTTGCCATCCTTCTGCGGGCCCCCTCCCTTGCTTCTTCCTACTTCCCGGATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000356535.4 |
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| 3UTR-3UTR CAA 90 bp | CTGGAAAGAAGTAACATCAAAATGGTTCTCTTTGGGGGCTGGGAGCCTTGGCTCAAAATTAGCCCGGCGTaGGTGGCTTGCACCTGTGGT | + |
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Preference number: 3 (lower is better) Translates to: LERSNIKMVLFGGWEPWLKISPA*VACTCG Trigger: ACCACAGGTGCAAGCCACCAACGCCGGGCTAATTTT...GAGCCAAGGCTCCCAGCCCCCAAAGAGAACCATTTTGATGTTACTTCTTTCCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000356535.4 |
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| 3UTR GCA 72 bp | GCCTACCCACCTATGTCAGTATCATCAATATACCATTaGAGGTCACACAAAAAGTGTCTGAGGAAGGCTTGG | + |
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Preference number: 3 (lower is better) Translates to: AYPPMSVSSIYH*RSHKKCLRKAW Trigger: CCAAGCCTTCCTCAGACACTTTTTGTGTGACCTGCAATGGTATATTGATGATACTGACATAGGTGGGTAGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000356535.4 |
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| 3UTR TCA 72 bp | GACTATGTAAAGCATTCTCACACCCTCCTCCAAAATTaGATGAGCCTACCCACCTATGTCAGTATCATCAAT | + |
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Preference number: 3 (lower is better) Translates to: DYVKHSHTLLQN*MSLPTYVSIIN Trigger: ATTGATGATACTGACATAGGTGGGTAGGCTCATTCAATTTTGGAGGAGGGTGTGAGAATGCTTTACATAGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000356535.4 |
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| CDS-3UTR TCA 90 bp | CATCCGGGAAGTAGGAAGAAGCAAGGGAGGGGGCCCGCAGAAGGATGGCAACACGGTTGTAGAATCGCTTaGGCCCATGAAGCAGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: HPGSRKKQGRGPAEGWQHGCRIA*AHEAEV Trigger: AACCTCTGCTTCATGGGCTCAAGCGATTCTACAACC...GTGTTGCCATCCTTCTGCGGGCCCCCTCCCTTGCTTCTTCCTACTTCCCGGATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000356535.4 |
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| CDS-3UTR GCA 90 bp | CATCCGGGAAGTAGGAAGAAGCAAGGGAGGGGGCCCGCAGAAGGATGGCAACACAACAACCTCAATGATTaGCAGGAGCCATCCGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: HPGSRKKQGRGPAEGWQHNNLND*QEPSGK Trigger: CTTCCCGGATGGCTCCTGGCAATCATTGAGGTTGTT...GTGTTGCCATCCTTCTGCGGGCCCCCTCCCTTGCTTCTTCCTACTTCCCGGATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000356535.4 |
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| 3UTR CAA 72 bp | GGGGGCCCGCAGAAGGATGGCAACACTAGGGTCGCCTaGATCTCAGGCGTCCAGCTTTCAGAACTGAGAAAA | + |
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Preference number: 4 (lower is better) Translates to: GGPQKDGNTRVA*ISGVQLSELRK Trigger: TTTTCTCAGTTCTGAAAGCTGGACGCCTGAGATCAAGGCGACCCTAGTGTTGCCATCCTTCTGCGGGCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000356535.4 |
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| CDS-3UTR GCA 90 bp | CATCCGGGAAGTAGGAAGAAGCAAGGGAGGGGGCCCGCAGAAGGATGGCAACACCAGAACAGTGCTGATTaGAGTAGTCAAGGGGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: HPGSRKKQGRGPAEGWQHQNSAD*SSQGEK Trigger: CTTCTCCCCTTGACTACTGCAATCAGCACTGTTCTG...GTGTTGCCATCCTTCTGCGGGCCCCCTCCCTTGCTTCTTCCTACTTCCCGGATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000356535.4 |
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| CDS-3UTR CCA 90 bp | GGACTATGTAAAGCATTCTCACACCCTCCTCCAAAATTGAATGAGCCTACCCACAGCTGTAGGCCAGCCTaGGCAACATGGCGAAATCCC | + |
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Preference number: 4 (lower is better) Translates to: GLCKAFSHPPPKLNEPTHSCRPA*ATWRNP Trigger: GGGATTTCGCCATGTTGCCCAGGCTGGCCTACAGCT...GTGGGTAGGCTCATTCAATTTTGGAGGAGGGTGTGAGAATGCTTTACATAGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000356535.4 |
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| CDS-3UTR TCA 90 bp | GGACTATGTAAAGCATTCTCACACCCTCCTCCAAAATTGAATGAGCCTACCCACAAGCAGAGGTTGCAGTaGGCCAAGAATGCACCCCCT | + |
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Preference number: 4 (lower is better) Translates to: GLCKAFSHPPPKLNEPTHKQRLQ*AKNAPP Trigger: AGGGGGTGCATTCTTGGCTCACTGCAACCTCTGCTT...GTGGGTAGGCTCATTCAATTTTGGAGGAGGGTGTGAGAATGCTTTACATAGTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000356535.4 |
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| CDS-3UTR TCA 90 bp | CTGGAAAGAAGTAACATCAAAATGGTTCTCTTTGGGGGCTGGGAGCCTTGGCTCACCCTCCTCCAAAATTaGATGAGCCTACCCACCTAT | + |
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Preference number: 4 (lower is better) Translates to: LERSNIKMVLFGGWEPWLTLLQN*MSLPTY Trigger: ATAGGTGGGTAGGCTCATTCAATTTTGGAGGAGGGT...GAGCCAAGGCTCCCAGCCCCCAAAGAGAACCATTTTGATGTTACTTCTTTCCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000356535.4 |
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| CDS-3UTR GCA 90 bp | GGACTATGTAAAGCATTCTCACACCCTCCTCCAAAATTGAATGAGCCTACCCACAGCCTCCACCATCCTTaGCCTTTCCCCTCTTTAGAG | + |
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Preference number: 4 (lower is better) Translates to: GLCKAFSHPPPKLNEPTHSLHHP*PFPSLE Trigger: CTCTAAAGAGGGGAAAGGGCAAGGATGGTGGAGGCT...GTGGGTAGGCTCATTCAATTTTGGAGGAGGGTGTGAGAATGCTTTACATAGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000356535.4 |
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| CDS-3UTR CCA 90 bp | AGATGGAGTCAGAAATGGATCAGAGTAATAACAACTGTAAGCCCAACAACCTCAGTTCTCTTTGGGGGCTaGGAGCCTTGGCTCAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: RWSQKWIRVITTVSPTTSVLFGG*EPWLRP Trigger: AGGCCTGAGCCAAGGCTCCCAGCCCCCAAAGAGAAC...TGAGGTTGTTGGGCTTACAGTTGTTATTACTCTGATCCATTTCTGACTCCATCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000356535.4 |
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| CDS-3UTR CCA 90 bp | AGGAAACATGAGTCCCCATTCTTAAACAACAAAACTTTCTCTGCTGTCATCGTATTAGCCCGGCGTTGGTaGCTTGCACCTGTGGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: RKHESPFLNNKTFSAVIVLARRW*LAPVVP Trigger: TGGGACCACAGGTGCAAGCCACCAACGCCGGGCTAA...TACGATGACAGCAGAGAAAGTTTTGTTGTTTAAGAATGGGGACTCATGTTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000356535.4 |
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| CDS-3UTR CCA 90 bp | CTGGAAAGAAGTAACATCAAAATGGTTCTCTTTGGGGGCTGGGAGCCTTGGCTCGAAGTAACATCAAAATaGTTCTCTTTGGGGGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: LERSNIKMVLFGGWEPWLEVTSK*FSLGAG Trigger: CCCAGCCCCCAAAGAGAACCATTTTGATGTTACTTC...GAGCCAAGGCTCCCAGCCCCCAAAGAGAACCATTTTGATGTTACTTCTTTCCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000356535.4 |
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| CDS-3UTR GCA 90 bp | AGATGGAGTCAGAAATGGATCAGAGTAATAACAACTGTAAGCCCAACAACCTCACAAGAATGCACCCCCTaGACTCCAGTCTGGGTGACA | + |
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Preference number: 4 (lower is better) Translates to: RWSQKWIRVITTVSPTTSQECTP*TPVWVT Trigger: TGTCACCCAGACTGGAGTGCAGGGGGTGCATTCTTG...TGAGGTTGTTGGGCTTACAGTTGTTATTACTCTGATCCATTTCTGACTCCATCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000356535.4 |
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| 3UTR CAA 72 bp | AGCCTACCCACCTATGTCAGTATCATCAATATACCATaGCAGGTCACACAAAAAGTGTCTGAGGAAGGCTTG | + |
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Preference number: 4 (lower is better) Translates to: SLPTYVSIINIP*QVTQKVSEEGL Trigger: CAAGCCTTCCTCAGACACTTTTTGTGTGACCTGCAATGGTATATTGATGATACTGACATAGGTGGGTAGGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000356535.4 |
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| CDS-3UTR GCA 90 bp | CTGGAAAGAAGTAACATCAAAATGGTTCTCTTTGGGGGCTGGGAGCCTTGGCTCTCATCAATATACCATTaGAGGTCACACAAAAAGTGT | + |
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Preference number: 4 (lower is better) Translates to: LERSNIKMVLFGGWEPWLSSIYH*RSHKKC Trigger: ACACTTTTTGTGTGACCTGCAATGGTATATTGATGA...GAGCCAAGGCTCCCAGCCCCCAAAGAGAACCATTTTGATGTTACTTCTTTCCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000356535.4 |
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| 3UTR CAA 72 bp | GGACTATGTAAAGCATTCTCACACCCTCCTCCAAAATaGAATGAGCCTACCCACCTATGTCAGTATCATCAA | + |
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Preference number: 4 (lower is better) Translates to: GLCKAFSHPPPK*NEPTHLCQYHQ Trigger: TTGATGATACTGACATAGGTGGGTAGGCTCATTCAATTTTGGAGGAGGGTGTGAGAATGCTTTACATAGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000356535.4 |
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| CDS-3UTR GCA 90 bp | GCCACCAAGTTTGTGGTACTTTGTTGTGGCAGCCTTAGGACACTAATAAATCCTCAACAAAACTTTCTCTaGTGTCATCGTACAAGGACT | + |
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Preference number: 4 (lower is better) Translates to: ATKFVVLCCGSLRTLINPQQNFL*CHRTRT Trigger: AGTCCTTGTACGATGACAGCAGAGAAAGTTTTGTTG...AGGATTTATTAGTGTCCTAAGGCTGCCACAACAAAGTACCACAAACTTGGTGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000356535.4 |
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| CDS-3UTR TCA 90 bp | GCCACCAAGTTTGTGGTACTTTGTTGTGGCAGCCTTAGGACACTAATAAATCCTTCCAGCTTTCAGAACTaGGAAAATTCATTTCTGTTG | + |
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Preference number: 4 (lower is better) Translates to: ATKFVVLCCGSLRTLINPSSFQN*ENSFLL Trigger: CAACAGAAATGAATTTTCTCAGTTCTGAAAGCTGGA...AGGATTTATTAGTGTCCTAAGGCTGCCACAACAAAGTACCACAAACTTGGTGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000356535.4 |
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| CDS-3UTR TCA 90 bp | TTAGGACAAAAACAGAGGAAAAAGTCTTGTAAAGATGGAGTCAGAAATGGATCACTGAGGAAGGCTTGGTaGAGGCATAATATTTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: LGQKQRKKSCKDGVRNGSLRKAW*RHNISP Trigger: AGGAGAAATATTATGCCTTCACCAAGCCTTCCTCAG...TGATCCATTTCTGACTCCATCTTTACAAGACTTTTTCCTCTGTTTTTGTCCTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000356535.4 |
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| CDS-3UTR TCA 90 bp | TTAGGACAAAAACAGAGGAAAAAGTCTTGTAAAGATGGAGTCAGAAATGGATCATCCTCCAAAATTGAATaGGCCTACCCACCTATGTCA | + |
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Preference number: 4 (lower is better) Translates to: LGQKQRKKSCKDGVRNGSSSKIE*AYPPMS Trigger: TGACATAGGTGGGTAGGCTCATTCAATTTTGGAGGA...TGATCCATTTCTGACTCCATCTTTACAAGACTTTTTCCTCTGTTTTTGTCCTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000356535.4 |
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| CDS-3UTR TCA 90 bp | AGATGGAGTCAGAAATGGATCAGAGTAATAACAACTGTAAGCCCAACAACCTCAATCTCCACAGAAACATaGATATCTCAATGCAGAACA | + |
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Preference number: 4 (lower is better) Translates to: RWSQKWIRVITTVSPTTSISTET*ISQCRT Trigger: TGTTCTGCATTGAGATATTCATGTTTCTGTGGAGAT...TGAGGTTGTTGGGCTTACAGTTGTTATTACTCTGATCCATTTCTGACTCCATCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000356535.4 |
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| CDS-3UTR CAA 90 bp | CATCCGGGAAGTAGGAAGAAGCAAGGGAGGGGGCCCGCAGAAGGATGGCAACACCACCCTCCTCCAAAATaGAATGAGCCTACCCACCTA | + |
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Preference number: 5 (lower is better) Translates to: HPGSRKKQGRGPAEGWQHHPPPK*NEPTHL Trigger: TAGGTGGGTAGGCTCATTCAATTTTGGAGGAGGGTG...GTGTTGCCATCCTTCTGCGGGCCCCCTCCCTTGCTTCTTCCTACTTCCCGGATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000356535.4 |
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| CDS-3UTR CAA 90 bp | GCCACCAAGTTTGTGGTACTTTGTTGTGGCAGCCTTAGGACACTAATAAATCCTGGCGGGAGCATCACTTaGAGCTCAAGAGCTGTAGGC | + |
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Preference number: 5 (lower is better) Translates to: ATKFVVLCCGSLRTLINPGGSIT*SSRAVG Trigger: GCCTACAGCTCTTGAGCTCAAAGTGATGCTCCCGCC...AGGATTTATTAGTGTCCTAAGGCTGCCACAACAAAGTACCACAAACTTGGTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000356535.4 |
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| CDS-3UTR CAA 90 bp | AGATGGAGTCAGAAATGGATCAGAGTAATAACAACTGTAAGCCCAACAACCTCAAAAATTAGCCCGGCGTaGGTGGCTTGCACCTGTGGT | + |
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Preference number: 5 (lower is better) Translates to: RWSQKWIRVITTVSPTTSKISPA*VACTCG Trigger: ACCACAGGTGCAAGCCACCAACGCCGGGCTAATTTT...TGAGGTTGTTGGGCTTACAGTTGTTATTACTCTGATCCATTTCTGACTCCATCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000356535.4 |
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| CDS-3UTR CAA 90 bp | GCCACCAAGTTTGTGGTACTTTGTTGTGGCAGCCTTAGGACACTAATAAATCCTCTAATCTCCGTGTTCTaGAATGTGCTGAGAGTCCTG | + |
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Preference number: 5 (lower is better) Translates to: ATKFVVLCCGSLRTLINPLISVF*NVLRVL Trigger: CAGGACTCTCAGCACATTCAAGAACACGGAGATTAG...AGGATTTATTAGTGTCCTAAGGCTGCCACAACAAAGTACCACAAACTTGGTGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000356535.4 |
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| CDS-3UTR CAA 90 bp | GGACTATGTAAAGCATTCTCACACCCTCCTCCAAAATTGAATGAGCCTACCCACTTTAAGCCACCAAGTTaGTGGTACTTTGTTGTGGCA | + |
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Preference number: 5 (lower is better) Translates to: GLCKAFSHPPPKLNEPTHFKPPS*WYFVVA Trigger: TGCCACAACAAAGTACCACAAACTTGGTGGCTTAAA...GTGGGTAGGCTCATTCAATTTTGGAGGAGGGTGTGAGAATGCTTTACATAGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000356535.4 |
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| CDS-3UTR CAA 90 bp | GCCACCAAGTTTGTGGTACTTTGTTGTGGCAGCCTTAGGACACTAATAAATCCTAGGAAGAATGGAGAATaGTCATTACTTACCATAACC | + |
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Preference number: 5 (lower is better) Translates to: ATKFVVLCCGSLRTLINPRKNGE*SLLTIT Trigger: GGTTATGGTAAGTAATGACAATTCTCCATTCTTCCT...AGGATTTATTAGTGTCCTAAGGCTGCCACAACAAAGTACCACAAACTTGGTGGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000356535.4 |
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| CDS-3UTR CAA 90 bp | TTAGGACAAAAACAGAGGAAAAAGTCTTGTAAAGATGGAGTCAGAAATGGATCAATCATCAATATACCATaGCAGGTCACACAAAAAGTG | + |
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Preference number: 5 (lower is better) Translates to: LGQKQRKKSCKDGVRNGSIINIP*QVTQKV Trigger: CACTTTTTGTGTGACCTGCAATGGTATATTGATGAT...TGATCCATTTCTGACTCCATCTTTACAAGACTTTTTCCTCTGTTTTTGTCCTAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000356535.4 |
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