Pregenerated sensors for FABP12 (Homo sapiens)
Ensembl gene IDs: ENSG00000197416Ensembl transcript IDs: ENST00000360464.4, ENST00000519696.1
Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | TTTGATGATACTTTCTCGTATGTTCGTGTACAGATAACACTGTTCACAGTACTTTTATGGTGGTTTCTTTaGCATCCCAGTCCTGAACTT | + |
|
Preference number: 2 (lower is better) Translates to: FDDTFSYVRVQITLFTVLLWWFL*HPSPEL Trigger: AAGTTCAGGACTGGGATGGCAAAGAAACCACCATAA...AAGTACTGTGAACAGTGTTATCTGTACACGAACATACGAGAAAGTATCATCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000519696.1 |
||
| CDS-3UTR GCA 90 bp | GAGACTGAGTTTGATGATACTTTCTCGTATGTTCGTGTACAGATAACACTGTTCAACGGCCCAGTTTCCTaGTGGCTCTTCCTATACCCA | + |
|
Preference number: 4 (lower is better) Translates to: ETEFDDTFSYVRVQITLFNGPVS*WLFLYP Trigger: TGGGTATAGGAAGAGCCAGCAGGAAACTGGGCCGTT...GAACAGTGTTATCTGTACACGAACATACGAGAAAGTATCATCAAACTCAGTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000519696.1 |
||
| CDS-3UTR GCA 90 bp | GATGATACTTTCTCGTATGTTCGTGTACAGATAACACTGTTCACAGTACTTTCCGGTCACAGTGGGTTTTaGCAAACGGCCCAGTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DDTFSYVRVQITLFTVLSGHSGF*QTAQFP Trigger: AGGAAACTGGGCCGTTTGGCAAAACCCACTGTGACC...GGAAAGTACTGTGAACAGTGTTATCTGTACACGAACATACGAGAAAGTATCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000519696.1 |
||
| CDS-3UTR CCA 90 bp | GATGATACTTTCTCGTATGTTCGTGTACAGATAACACTGTTCACAGTACTTTCCCTCACCTTTGTTTTGTaGCCACCTGGCGTGATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: DDTFSYVRVQITLFTVLSLTFVL*PPGVIS Trigger: GGAAATCACGCCAGGTGGCCACAAAACAAAGGTGAG...GGAAAGTACTGTGAACAGTGTTATCTGTACACGAACATACGAGAAAGTATCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000519696.1 |
||
| CDS-3UTR TCA 90 bp | GAGACTGAGTTTGATGATACTTTCTCGTATGTTCGTGTACAGATAACACTGTTCCATCTCCATCTGTACTaGTGGTCACAGTGGGTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: ETEFDDTFSYVRVQITLFHLHLY*WSQWVL Trigger: CAAAACCCACTGTGACCATCAGTACAGATGGAGATG...GAACAGTGTTATCTGTACACGAACATACGAGAAAGTATCATCAAACTCAGTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000519696.1 |
||
| CDS-3UTR TCA 90 bp | GAGACTGAGTTTGATGATACTTTCTCGTATGTTCGTGTACAGATAACACTGTTCCTTTTGAAATGTGTCTaGAAGACTGTCGTAGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ETEFDDTFSYVRVQITLFLLKCV*KTVVGL Trigger: GAGGCCTACGACAGTCTTTCAGACACATTTCAAAAG...GAACAGTGTTATCTGTACACGAACATACGAGAAAGTATCATCAAACTCAGTCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000519696.1 |
||
| CDS-3UTR CCA 90 bp | TTTGAGACTGAGTTTGATGATACTTTCTCGTATGTTCGTGTACAGATAACACTGTGTTTTGTGGCCACCTaGCGTGATTTCCTCAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: FETEFDDTFSYVRVQITLCFVAT*RDFLKL Trigger: GAGTTTGAGGAAATCACGCCAGGTGGCCACAAAACA...CAGTGTTATCTGTACACGAACATACGAGAAAGTATCATCAAACTCAGTCTCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000519696.1 |
||
| CDS-3UTR CAA 90 bp | TTTCTCGTATGTTCGTGTACAGATAACACTGTTCACAGTACTTTCCACCACCATGGCCTCACCTTTGTTTaGTGGCCACCTGGCGTGATT | + |
|
Preference number: 5 (lower is better) Translates to: FLVCSCTDNTVHSTFHHHGLTFV*WPPGVI Trigger: AATCACGCCAGGTGGCCACAAAACAAAGGTGAGGCC...ATGGTGGTGGAAAGTACTGTGAACAGTGTTATCTGTACACGAACATACGAGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000519696.1 |
||
| CDS CCA 90 bp | CTATACCCAGCTCCTTCATGTAGTCTTCGGAATTTTCACAAGAAATaGACTTCCATGTTCCTTGGAGCTGGTCAATCATTCTGTCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LYPAPSCSLRNFHKK*TSMFLGAGQSFCLR Trigger: TCTCAGACAGAATGATTGACCAGCTCCAAGGAACATGGAAGTCCATTTCTTGTGAAAATTCCGAAGACTACATGAAGGAGCTGGGTATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360464.4 |
||
| CDS TCA 90 bp | AGAAATGGACTTCCATGTTCCTTGGAGCTGGTCAATCATTCTGTCTaGGATAAGTTGATCTCAAAGAACAGTAGTTTCATGTGTATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RNGLPCSLELVNHSV*DKLISKNSSFMCML Trigger: CAGCATACACATGAAACTACTGTTCTTTGAGATCAACTTATCTCAGACAGAATGATTGACCAGCTCCAAGGAACATGGAAGTCCATTTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360464.4 |
||
| CDS-3UTR CAA 90 bp | TTTGAGACTGAGTTTGATGATACTTTCTCGTATGTTCGTGTACAGATAACACTGAGTTTGAGACTGAGTTaGATGATACTTTCTCGTATG | + |
|
Preference number: 5 (lower is better) Translates to: FETEFDDTFSYVRVQITLSLRLS*MILSRM Trigger: CATACGAGAAAGTATCATCAAACTCAGTCTCAAACT...CAGTGTTATCTGTACACGAACATACGAGAAAGTATCATCAAACTCAGTCTCAAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000519696.1 |
||
| CDS CCA 72 bp | GCTCCTTCATGTAGTCTTCGGAATTTTCACAAGAAATaGACTTCCATGTTCCTTGGAGCTGGTCAATCATTC | + |
|
Preference number: 6 (lower is better) Translates to: APSCSLRNFHKK*TSMFLGAGQSF Trigger: GAATGATTGACCAGCTCCAAGGAACATGGAAGTCCATTTCTTGTGAAAATTCCGAAGACTACATGAAGGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360464.4 |
||