RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAAP20 (Homo sapiens)

Ensembl gene IDs: ENSG00000162585

Ensembl transcript IDs: ENST00000378543.2, ENST00000378546.9, ENST00000400918.7, ENST00000400919.7, ENST00000401813.7, ENST00000414253.5, ENST00000420515.1, ENST00000420964.1, ENST00000428120.5, ENST00000440825.6, ENST00000469733.5, ENST00000476803.1, ENST00000487186.5, ENST00000497675.2, ENST00000514625.1

Found 878 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGGGCCCGGGCAGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTaGCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAGGGGGCTG +
Preference number: 1 (lower is better)
Translates to: LGPGRPASCWRNLLL*LRRGGSAGTLPRGL
Trigger: CAGCCCCCTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCCCGGGCCCAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000400918.7
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR GCA 90 bp CACACCTGGGCCCGGGCAGGCCAGCTTCGTGCTGGAGGAACTTGCTaGTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAGGG +
Preference number: 1 (lower is better)
Translates to: HTWARAGQLRAGGTC*CACVAADPRGPCRG
Trigger: CCCTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCCCGGGCCCAGGTGTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400918.7
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR GCA 90 bp CCTCACACCTGGGCCCGGGCAGGCCAGCTTCGTGCTGGAGGAACTTaGTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGA +
Preference number: 1 (lower is better)
Translates to: PHTWARAGQLRAGGT*CCACVAADPRGPCR
Trigger: TCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCCCGGGCCCAGGTGTGAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400918.7
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR GCA 90 bp GCCCGGGCAGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTaGGTCGCGGCGGATCCGCGGGGACCCTGCCGAGGGGGCTGTCAT +
Preference number: 1 (lower is better)
Translates to: ARAGQLRAGGTCCCA*VAADPRGPCRGGCH
Trigger: ATGACAGCCCCCTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCCCGGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400918.7
ENST00000414253.5
ENST00000428120.5
3UTR GCA 90 bp ACTCTGGTGACTTGGGGGCTGCACAGTGGGCCTGCGTGGGCGTGGTaGGGGGCAACTGCCCATGGAGCCCGTGGCTGGCCGGCTCTCCTG +
Preference number: 1 (lower is better)
Translates to: TLVTWGLHSGPAWAW*GATAHGARGWPALL
Trigger: CAGGAGAGCCGGCCAGCCACGGGCTCCATGGGCAGTTGCCCCGCACCACGCCCACGCAGGCCCACTGTGCAGCCCCCAAGTCACCAGAGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR CCA 90 bp GACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTaGGAGCAGAACAGTCCCTCACACCTGGGCCCGGGCAGGCCAGCT +
Preference number: 1 (lower is better)
Translates to: DACAETAEGSVSGRC*EQNSPSHLGPGRPA
Trigger: AGCTGGCCTGCCCGGGCCCAGGTGTGAGGGACTGTTCTGCTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR GCA 90 bp ACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTaGTGGGAGCAGAACAGTCCCTCACACCTGGGCCCGGGCAGGCCA +
Preference number: 1 (lower is better)
Translates to: TDACAETAEGSVSGR*WEQNSPSHLGPGRP
Trigger: TGGCCTGCCCGGGCCCAGGTGTGAGGGACTGTTCTGCTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR GCA 90 bp TTGGGGGCTGCACAGTGGGCCTGCGTGGGCGTGGTGCGGGGCAACTaGCCATGGAGCCCGTGGCTGGCCGGCTCTCCTGTGGATGACACT +
Preference number: 1 (lower is better)
Translates to: LGAAQWACVGVVRGN*PWSPWLAGSPVDDT
Trigger: AGTGTCATCCACAGGAGAGCCGGCCAGCCACGGGCTCCATGGGCAGTTGCCCCGCACCACGCCCACGCAGGCCCACTGTGCAGCCCCCAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428120.5
3UTR CCA 90 bp CAGAACAGTCCCTCACACCTGGGCCCGGGCAGGCCAGCTTCGTGCTaGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGG +
Preference number: 1 (lower is better)
Translates to: QNSPSHLGPGRPASC*RNLLLCLRRGGSAG
Trigger: CCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCCCGGGCCCAGGTGTGAGGGACTGTTCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR CCA 90 bp GCTGCACAGTGGGCCTGCGTGGGCGTGGTGCGGGGCAACTGCCCATaGAGCCCGTGGCTGGCCGGCTCTCCTGTGGATGACACTCACCCT +
Preference number: 1 (lower is better)
Translates to: AAQWACVGVVRGNCP*SPWLAGSPVDDTHP
Trigger: AGGGTGAGTGTCATCCACAGGAGAGCCGGCCAGCCACGGGCTCCATGGGCAGTTGCCCCGCACCACGCCCACGCAGGCCCACTGTGCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428120.5
3UTR GCA 90 bp GAGCAGAACAGTCCCTCACACCTGGGCCCGGGCAGGCCAGCTTCGTaGTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCG +
Preference number: 1 (lower is better)
Translates to: EQNSPSHLGPGRPAS*WRNLLLCLRRGGSA
Trigger: CGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCCCGGGCCCAGGTGTGAGGGACTGTTCTGCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR CCA 90 bp GGCGGGGGAGAGCGTGTCCGGGCGCCGCACTCTGCGCAGGGCTCTTaGATGGCGCTCACCACGTCACGTCTTCTGTGCTTTCGGCCAAGC +
Preference number: 1 (lower is better)
Translates to: GGGERVRAPHSAQGS*MALTTSRLLCFRPS
Trigger: GCTTGGCCGAAAGCACAGAAGACGTGACGTGGTGAGCGCCATCCAAGAGCCCTGCGCAGAGTGCGGCGCCCGGACACGCTCTCCCCCGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378543.2
ENST00000440825.6
3UTR CCA 90 bp CCTGCGTGGGCGTGGTGCGGGGCAACTGCCCATGGAGCCCGTGGCTaGCCGGCTCTCCTGTGGATGACACTCACCCTTGACTGCCAGGGT +
Preference number: 1 (lower is better)
Translates to: PAWAWCGATAHGARG*PALLWMTLTLDCQG
Trigger: ACCCTGGCAGTCAAGGGTGAGTGTCATCCACAGGAGAGCCGGCCAGCCACGGGCTCCATGGGCAGTTGCCCCGCACCACGCCCACGCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428120.5
3UTR TCA 90 bp ACACAGTTCACCAGCGAGCCCGTGCAGCTGACCCCAGACGATGAGTaGGTCCCACTGGGTGCGGGTCCCTGGAGCACCCCTCGGGCAGCC +
Preference number: 1 (lower is better)
Translates to: TQFTSEPVQLTPDDE*VPLGAGPWSTPRAA
Trigger: GGCTGCCCGAGGGGTGCTCCAGGGACCCGCACCCAGTGGGACTCACTCATCGTCTGGGGTCAGCTGCACGGGCTCGCTGGTGAACTGTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR GCA 90 bp CAAGTCCGGCTGTTAGACCAGACCCTCCAATCCAGGCGGCCTCCCTaGTGGGGTCCTGTGCGGTCAGGAGTCCCAGGGCATCCCAGGGTG +
Preference number: 1 (lower is better)
Translates to: QVRLLDQTLQSRRPP*WGPVRSGVPGHPRV
Trigger: CACCCTGGGATGCCCTGGGACTCCTGACCGCACAGGACCCCAGCAGGGAGGCCGCCTGGATTGGAGGGTCTGGTCTAACAGCCGGACTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420515.1
3UTR CCA 90 bp GGGGAGAGCGTGTCCGGGCGCCGCACTCTGCGCAGGGCTCTTGGATaGCGCTCACCACGTCACGTCTTCTGTGCTTTCGGCCAAGCACTG +
Preference number: 1 (lower is better)
Translates to: GESVSGRRTLRRALG*RSPRHVFCAFGQAL
Trigger: CAGTGCTTGGCCGAAAGCACAGAAGACGTGACGTGGTGAGCGCCATCCAAGAGCCCTGCGCAGAGTGCGGCGCCCGGACACGCTCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378543.2
ENST00000440825.6
3UTR CCA 90 bp GAAGCGTCAGCGGGCGCTGCTGGGAGCAGAACAGTCCCTCACACCTaGGCCCGGGCAGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGT +
Preference number: 1 (lower is better)
Translates to: EASAGAAGSRTVPHT*ARAGQLRAGGTCCC
Trigger: ACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCCCGGGCCCAGGTGTGAGGGACTGTTCTGCTCCCAGCAGCGCCCGCTGACGCTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR CCA 90 bp CCCTGGGAGAGGGGGTCGCGCCACCTCATGCCTCTGAGTGAGGCCTaGTGCACAGGTGTGGAAATTGCCACGCAGCCCTCTTGGCCAGGC +
Preference number: 1 (lower is better)
Translates to: PWERGSRHLMPLSEA*CTGVEIATQPSWPG
Trigger: GCCTGGCCAAGAGGGCTGCGTGGCAATTTCCACACCTGTGCACCAGGCCTCACTCAGAGGCATGAGGTGGCGCGACCCCCTCTCCCAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR TCA 90 bp CTGAGCTCCCTGGGAGAGGGGGTCGCGCCACCTCATGCCTCTGAGTaGGGCCTGGTGCACAGGTGTGGAAATTGCCACGCAGCCCTCTTG +
Preference number: 1 (lower is better)
Translates to: LSSLGEGVAPPHASE*GLVHRCGNCHAALL
Trigger: CAAGAGGGCTGCGTGGCAATTTCCACACCTGTGCACCAGGCCTCACTCAGAGGCATGAGGTGGCGCGACCCCCTCTCCCAGGGAGCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR TCA 90 bp TCTTCTGAGCTCCCTGGGAGAGGGGGTCGCGCCACCTCATGCCTCTaGGTGAGGCCTGGTGCACAGGTGTGGAAATTGCCACGCAGCCCT +
Preference number: 1 (lower is better)
Translates to: SSELPGRGGRATSCL*VRPGAQVWKLPRSP
Trigger: AGGGCTGCGTGGCAATTTCCACACCTGTGCACCAGGCCTCACTCAGAGGCATGAGGTGGCGCGACCCCCTCTCCCAGGGAGCTCAGAAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR TCA 90 bp CAGCATTTGACGGTCCTCTGGGTGACCCGGAGAACACCAAGGCTGTaGGAAATGGGAGGCCTCCTGGCAGCTCCACTCCCCAGACCCGCC +
Preference number: 1 (lower is better)
Translates to: QHLTVLWVTRRTPRL*EMGGLLAAPLPRPA
Trigger: GGCGGGTCTGGGGAGTGGAGCTGCCAGGAGGCCTCCCATTTCTCACAGCCTTGGTGTTCTCCGGGTCACCCAGAGGACCGTCAAATGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420515.1
3UTR CCA 90 bp CCCAGCCTGCCCTTGAGTCCCACCCGCCTGGTGTCATCTCTCCAGTaGGCGTTGGGGGAGGATTCTTATGCGAACGTGACTCCGCTTCCC +
Preference number: 1 (lower is better)
Translates to: PSLPLSPTRLVSSLQ*ALGEDSYANVTPLP
Trigger: GGGAAGCGGAGTCACGTTCGCATAAGAATCCTCCCCCAACGCCCACTGGAGAGATGACACCAGGCGGGTGGGACTCAAGGGCAGGCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR CCA 90 bp CCTGCTGGGGTCCTGTGCGGTCAGGAGTCCCAGGGCATCCCAGGGTaGCTGTGCAAACCCTTGTTCCCAAAGATATGGGGCTTGTCCCCC +
Preference number: 1 (lower is better)
Translates to: PAGVLCGQESQGIPG*LCKPLFPKIWGLSP
Trigger: GGGGGACAAGCCCCATATCTTTGGGAACAAGGGTTTGCACAGCCACCCTGGGATGCCCTGGGACTCCTGACCGCACAGGACCCCAGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420515.1
3UTR CCA 90 bp TCCCAAAGATATGGGGCTTGTCCCCCAGCTAGCCTGCCCATGCGGTaGCCACAGCCTCGGGTGAGTTCCGGTTCCAAAGTACCGGCTCTC +
Preference number: 1 (lower is better)
Translates to: SQRYGACPPASLPMR*PQPRVSSGSKVPAL
Trigger: GAGAGCCGGTACTTTGGAACCGGAACTCACCCGAGGCTGTGGCCACCGCATGGGCAGGCTAGCTGGGGGACAAGCCCCATATCTTTGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420515.1
3UTR CCA 90 bp TGCGGGGCAACTGCCCATGGAGCCCGTGGCTGGCCGGCTCTCCTGTaGATGACACTCACCCTTGACTGCCAGGGTCATTCAAAGTCTTGC +
Preference number: 1 (lower is better)
Translates to: CGATAHGARGWPALL*MTLTLDCQGHSKSC
Trigger: GCAAGACTTTGAATGACCCTGGCAGTCAAGGGTGAGTGTCATCCACAGGAGAGCCGGCCAGCCACGGGCTCCATGGGCAGTTGCCCCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428120.5
3UTR TCA 90 bp CTTGTCCCCCAGCTAGCCTGCCCATGCGGTGGCCACAGCCTCGGGTaGGTTCCGGTTCCAAAGTACCGGCTCTCCCTTACGATCAAGTGT +
Preference number: 1 (lower is better)
Translates to: LVPQLACPCGGHSLG*VPVPKYRLSLTIKC
Trigger: ACACTTGATCGTAAGGGAGAGCCGGTACTTTGGAACCGGAACTCACCCGAGGCTGTGGCCACCGCATGGGCAGGCTAGCTGGGGGACAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420515.1
3UTR GCA 90 bp TCTGCGCAGGGCTCTTGGATGGCGCTCACCACGTCACGTCTTCTGTaGTTTCGGCCAAGCACTGGGCCAGGTGGCTGTCAACATCCAGCT +
Preference number: 1 (lower is better)
Translates to: SAQGSWMALTTSRLL*FRPSTGPGGCQHPA
Trigger: AGCTGGATGTTGACAGCCACCTGGCCCAGTGCTTGGCCGAAAGCACAGAAGACGTGACGTGGTGAGCGCCATCCAAGAGCCCTGCGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378543.2
ENST00000440825.6
3UTR CCA 90 bp CACCACGTCACGTCTTCTGTGCTTTCGGCCAAGCACTGGGCCAGGTaGCTGTCAACATCCAGCTGGGTCAGCTCTGTCACCCAGGCTGGA +
Preference number: 1 (lower is better)
Translates to: HHVTSSVLSAKHWAR*LSTSSWVSSVTQAG
Trigger: TCCAGCCTGGGTGACAGAGCTGACCCAGCTGGATGTTGACAGCCACCTGGCCCAGTGCTTGGCCGAAAGCACAGAAGACGTGACGTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440825.6
3UTR TCA 90 bp GGGCAACTGCCCATGGAGCCCGTGGCTGGCCGGCTCTCCTGTGGATaGCACTCACCCTTGACTGCCAGGGTCATTCAAAGTCTTGCACAT +
Preference number: 1 (lower is better)
Translates to: GQLPMEPVAGRLSCG*HSPLTARVIQSLAH
Trigger: ATGTGCAAGACTTTGAATGACCCTGGCAGTCAAGGGTGAGTGTCATCCACAGGAGAGCCGGCCAGCCACGGGCTCCATGGGCAGTTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428120.5
3UTR GCA 90 bp CCGCCTGGTGTCATCTCTCCAGTGGGCGTTGGGGGAGGATTCTTATaGGAACGTGACTCCGCTTCCCCCAAGGGAATGAACACACGGTCA +
Preference number: 1 (lower is better)
Translates to: PPGVISPVGVGGGFL*ERDSASPKGMNTRS
Trigger: TGACCGTGTGTTCATTCCCTTGGGGGAAGCGGAGTCACGTTCGCATAAGAATCCTCCCCCAACGCCCACTGGAGAGATGACACCAGGCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR CCA 90 bp ATCCATGAAAGACACGTCACGTCTTCTGTGCTTTCGGCCAAGCACTaGGCCAGGTGGCTGTCAACATCCAGCTGGGTCAGCCTGCCTCAG +
Preference number: 1 (lower is better)
Translates to: IHERHVTSSVLSAKH*ARWLSTSSWVSLPQ
Trigger: CTGAGGCAGGCTGACCCAGCTGGATGTTGACAGCCACCTGGCCCAGTGCTTGGCCGAAAGCACAGAAGACGTGACGTGTCTTTCATGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428120.5
3UTR TCA 90 bp TCCATTCCAGCCACAGATCACAGACGACTACGGTCTGGACAACTTTaGCACACAGTTCACCAGCGAGCCCGTGCAGCTGACCCCAGACGA +
Preference number: 1 (lower is better)
Translates to: SIPATDHRRLRSGQL*HTVHQRARAADPRR
Trigger: TCGTCTGGGGTCAGCTGCACGGGCTCGCTGGTGAACTGTGTGTCAAAGTTGTCCAGACCGTAGTCGTCTGTGATCTGTGGCTGGAATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR TCA 90 bp TGGAGCCCGTGGCTGGCCGGCTCTCCTGTGGATGACACTCACCCTTaGCTGCCAGGGTCATTCAAAGTCTTGCACATCCATGAAAGACAC +
Preference number: 1 (lower is better)
Translates to: WSPWLAGSPVDDTHP*LPGSFKVLHIHERH
Trigger: GTGTCTTTCATGGATGTGCAAGACTTTGAATGACCCTGGCAGTCAAGGGTGAGTGTCATCCACAGGAGAGCCGGCCAGCCACGGGCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428120.5
3UTR GCA 90 bp GCCCGTGGCTGGCCGGCTCTCCTGTGGATGACACTCACCCTTGACTaGCAGGGTCATTCAAAGTCTTGCACATCCATGAAAGACACGTCA +
Preference number: 1 (lower is better)
Translates to: ARGWPALLWMTLTLD*QGHSKSCTSMKDTS
Trigger: TGACGTGTCTTTCATGGATGTGCAAGACTTTGAATGACCCTGGCAGTCAAGGGTGAGTGTCATCCACAGGAGAGCCGGCCAGCCACGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428120.5
3UTR TCA 90 bp GCGTGCAAAACACTCAATCTGGTAGGGATGATGCCCGCGCGGAGCTaGCCCTTCTCCTATTGTTTTTCCAAGCTGGAGAAGAAGCAGGCG +
Preference number: 1 (lower is better)
Translates to: ACKTLNLVGMMPARS*PFSYCFSKLEKKQA
Trigger: CGCCTGCTTCTTCTCCAGCTTGGAAAAACAATAGGAGAAGGGTCAGCTCCGCGCGGGCATCATCCCTACCAGATTGAGTGTTTTGCACGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR CCA 90 bp AGCACCCTGACAGCAACAAGGATCTCAGAGCTTCAGCCAAGAGCATaGATTTCTCCCCAGGGCTCCCAACAGTACCCTCTGTCCGTGATT +
Preference number: 1 (lower is better)
Translates to: STLTATRISELQPRA*ISPQGSQQYPLSVI
Trigger: AATCACGGACAGAGGGTACTGTTGGGAGCCCTGGGGAGAAATCCATGCTCTTGGCTGAAGCTCTGAGATCCTTGTTGCTGTCAGGGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420515.1
3UTR TCA 90 bp CGATGCACTGACCTGCTCCGCCAGGAAAGTGAGCGTGTAGCGTCCTaGGGAATAAAATGTTCCGATGATGTGGAAGCTCCTCTGATGCCT +
Preference number: 1 (lower is better)
Translates to: RCTDLLRQESERVAS*GIKCSDDVEAPLMP
Trigger: AGGCATCAGAGGAGCTTCCACATCATCGGAACATTTTATTCCTCAGGACGCTACACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400918.7
ENST00000414253.5
ENST00000428120.5
3UTR TCA 90 bp CAGGGATGCCATAAAGAGGATCGACCAGTCAGAGTTCGAAGGCTTTaGGTATATCAACCCATTATTGCTGTCCACCGAGGAGTCGGTGTG +
Preference number: 1 (lower is better)
Translates to: QGCHKEDRPVRVRRL*VYQPIIAVHRGVGV
Trigger: CACACCGACTCCTCGGTGGACAGCAATAATGGGTTGATATACTCAAAGCCTTCGAACTCTGACTGGTCGATCCTCTTTATGGCATCCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR TCA 90 bp TCCAAAGTACCGGCTCTCCCTTACGATCAAGTGTTCGAATGTGCTTaGAGCATTCCAGACACACCAAGGCCTGGACCTGACTTCATTGAC +
Preference number: 1 (lower is better)
Translates to: SKVPALPYDQVFECA*SIPDTPRPGPDFID
Trigger: GTCAATGAAGTCAGGTCCAGGCCTTGGTGTGTCTGGAATGCTTCAAGCACATTCGAACACTTGATCGTAAGGGAGAGCCGGTACTTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420515.1
3UTR-3UTR GCA 90 bp CTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAGGGGGCTGTCAGCTGCACAGTGGGCCTaGGTGGGCGTGGTGCGGGGC +
Preference number: 2 (lower is better)
Translates to: LLCLRRGGSAGTLPRGLSAAQWA*VGVVRG
Trigger: GCCCCGCACCACGCCCACGCAGGCCCACTGTGCAGC...TGACAGCCCCCTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR CAA 90 bp CCCTCACACCTGGGCCCGGGCAGGCCAGCTTCGTGCTGGAGGAACTaGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCG +
Preference number: 2 (lower is better)
Translates to: PSHLGPGRPASCWRN*LLCLRRGGSAGTLP
Trigger: CGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCCCGGGCCCAGGTGTGAGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400918.7
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR GCA 90 bp GCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAGGGGGCTGTCGCTGGAGGAACTTGCTaGTGTGCCTGCGTCGCGGCG +
Preference number: 2 (lower is better)
Translates to: AAVPASRRIRGDPAEGAVAGGTC*CACVAA
Trigger: CGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGC...GACAGCCCCCTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400918.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR GCA 90 bp CTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAGGGGGCTGTCAAGCGTCAGCGGGCGCTaGTGGGAGCAGAACAGTCCC +
Preference number: 2 (lower is better)
Translates to: LLCLRRGGSAGTLPRGLSSVSGR*WEQNSP
Trigger: GGGACTGTTCTGCTCCCAGCAGCGCCCGCTGACGCT...TGACAGCCCCCTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR CCA 90 bp GACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAGCAGGGGCCTGCGTGGGCGTaGTGCGGGGCAACTGCCCAT +
Preference number: 2 (lower is better)
Translates to: DACAETAEGSVSGRCWEQGPAWA*CGATAH
Trigger: ATGGGCAGTTGCCCCGCACCACGCCCACGCAGGCCC...CTGCTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR TCA 90 bp GCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAGGGGGCTGTCATGGCTCCGCCAGGAAAGTaGGCGTGTAGCGTCCTGAGG +
Preference number: 2 (lower is better)
Translates to: AVPASRRIRGDPAEGAVMAPPGK*ACSVLR
Trigger: CCTCAGGACGCTACACGCTCACTTTCCTGGCGGAGC...CATGACAGCCCCCTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400918.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR GCA 90 bp GCGGCGGATCCGCGGGGACCCTGCCGAGGGGGCTGTCATGCGGTTTCCAAGGTGGTGGTGCGGGGCAACTaGCCATGGAGCCCGTGGCTG +
Preference number: 2 (lower is better)
Translates to: AADPRGPCRGGCHAVSKVVVRGN*PWSPWL
Trigger: CAGCCACGGGCTCCATGGGCAGTTGCCCCGCACCAC...CACCTTGGAAACCGCATGACAGCCCCCTCGGCAGGGTCCCCGCGGATCCGCCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR CCA 90 bp GCTGGGAGCAGAACAGTCCCTCACACCTGGGCCCGGGCAGGCCAGCTTCGTGCTCGGGGCAACTGCCCATaGAGCCCGTGGCTGGCCGGC +
Preference number: 2 (lower is better)
Translates to: AGSRTVPHTWARAGQLRARGNCP*SPWLAG
Trigger: GCCGGCCAGCCACGGGCTCCATGGGCAGTTGCCCCG...AGCACGAAGCTGGCCTGCCCGGGCCCAGGTGTGAGGGACTGTTCTGCTCCCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR GCA 90 bp GCGGATCCGCGGGGACCCTGCCGAGGGGGCTGTCATGCGGTTTCCAAGGTGCACACTTGCTGCTGTGCCTaGGTCGCGGCGGATCCGCGG +
Preference number: 2 (lower is better)
Translates to: ADPRGPCRGGCHAVSKVHTCCCA*VAADPR
Trigger: CCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGT...GTGCACCTTGGAAACCGCATGACAGCCCCCTCGGCAGGGTCCCCGCGGATCCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400918.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR GCA 90 bp AACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAGGGGGCGTGCTGGAGGAACTTaGTGCTGTGCCTGCGTCGCG +
Preference number: 2 (lower is better)
Translates to: NLLLCLRRGGSAGTLPRGRAGGT*CCACVA
Trigger: CGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACG...CCCCCTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000400918.7
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR GCA 90 bp CTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAGGGGGCTGTCATCCGTGAGTGGCGCCTaGCCCACATCTCAGACGCAA +
Preference number: 2 (lower is better)
Translates to: LLCLRRGGSAGTLPRGLSSVSGA*PTSQTQ
Trigger: TTGCGTCTGAGATGTGGGGCAGGCGCCACTCACGGA...TGACAGCCCCCTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400918.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR GCA 90 bp AGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCTGCACAGTGGGCCTaGGTGGGCGTGGTGCGGGGC +
Preference number: 2 (lower is better)
Translates to: RPASCWRNLLLCLRRGGSAAQWA*VGVVRG
Trigger: GCCCCGCACCACGCCCACGCAGGCCCACTGTGCAGC...GGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR GCA 90 bp GCGGATCCGCGGGGACCCTGCCGAGGGGGCTGTCATGCGGTTTCCAAGGTGCACGCTGGAGGAACTTGCTaGTGTGCCTGCGTCGCGGCG +
Preference number: 2 (lower is better)
Translates to: ADPRGPCRGGCHAVSKVHAGGTC*CACVAA
Trigger: CGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGC...GTGCACCTTGGAAACCGCATGACAGCCCCCTCGGCAGGGTCCCCGCGGATCCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400918.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR GCA 90 bp GAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAGCGTGCTGGAGGAACTTaGTGCTGTGCCTGCGTCGCG +
Preference number: 2 (lower is better)
Translates to: EELAAVPASRRIRGDPAERAGGT*CCACVA
Trigger: CGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACG...CTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400918.7
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR GCA 90 bp TGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCAGGGACAGACGCTTaGGCCGAGACCGCAGAGGGA +
Preference number: 2 (lower is better)
Translates to: CWRNLLLCLRRGGSAGTLPGTDA*AETAEG
Trigger: TCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCCCTGG...CAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR GCA 90 bp TGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAGCAGAACAGTGTGGTGCGGGGCAACTaGCCATGGAGCCCGTGGCTG +
Preference number: 2 (lower is better)
Translates to: CAETAEGSVSGRCWEQNSVVRGN*PWSPWL
Trigger: CAGCCACGGGCTCCATGGGCAGTTGCCCCGCACCAC...ACTGTTCTGCTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR GCA 90 bp TGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAGCAGAACAGTCCTGCGTGGGCGTGGTaGGGGGCAACTGCCCATGGA +
Preference number: 2 (lower is better)
Translates to: CAETAEGSVSGRCWEQNSPAWAW*GATAHG
Trigger: TCCATGGGCAGTTGCCCCGCACCACGCCCACGCAGG...ACTGTTCTGCTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR CCA 90 bp AGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGTGCCCATGGAGCCCGTaGCTGGCCGGCTCTCCTGTG +
Preference number: 2 (lower is better)
Translates to: SFVLEELAAVPASRRIRGCPWSP*LAGSPV
Trigger: CACAGGAGAGCCGGCCAGCCACGGGCTCCATGGGCA...CCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR CCA 90 bp AGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGTTGGGGGCTGCACAGTaGGCCTGCGTGGGCGTGGTG +
Preference number: 2 (lower is better)
Translates to: SFVLEELAAVPASRRIRGLGAAQ*ACVGVV
Trigger: CACCACGCCCACGCAGGCCCACTGTGCAGCCCCCAA...CCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR CAA 90 bp TGGCGGGGGAGAGCGTGTCCGGGCGCCGCACTCTGCGCAGGGCTCTaGGATGGCGCTCACCACGTCACGTCTTCTGTGCTTTCGGCCAAG +
Preference number: 2 (lower is better)
Translates to: WRGRACPGAALCAGL*DGAHHVTSSVLSAK
Trigger: CTTGGCCGAAAGCACAGAAGACGTGACGTGGTGAGCGCCATCCAAGAGCCCTGCGCAGAGTGCGGCGCCCGGACACGCTCTCCCCCGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378543.2
ENST00000440825.6
3UTR-3UTR GCA 90 bp CGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCGGCAGGCCAGCTTCGTaGTGGAGGAACTTGCTGCTG +
Preference number: 2 (lower is better)
Translates to: RAGGTCCCACVAADPRGPGRPAS*WRNLLL
Trigger: CAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCC...GGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400918.7
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR GCA 90 bp CCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAGCAGAACAGTCCCTCGGTGTGAGGCCGCGTaGGTCTCTGTCGTGGACACG +
Preference number: 2 (lower is better)
Translates to: PRPQREASAGAAGSRTVPRCEAA*VSVVDT
Trigger: CGTGTCCACGACAGAGACGCACGCGGCCTCACACCG...AGGGACTGTTCTGCTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR GCA 90 bp TTGGGGGCTGCACAGTGGGCCTGCGTGGGCGTGGTGCGGGGCAACTGCCCATGGTCCGTGAGTGGCGCCTaGCCCACATCTCAGACGCAA +
Preference number: 2 (lower is better)
Translates to: LGAAQWACVGVVRGNCPWSVSGA*PTSQTQ
Trigger: TTGCGTCTGAGATGTGGGGCAGGCGCCACTCACGGA...CCATGGGCAGTTGCCCCGCACCACGCCCACGCAGGCCCACTGTGCAGCCCCCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR CCA 90 bp AACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAGGGGGCGTGCGTCTCTGTCGTaGACACGCGTGATTGACCCT +
Preference number: 2 (lower is better)
Translates to: NLLLCLRRGGSAGTLPRGRASLS*TRVIDP
Trigger: AGGGTCAATCACGCGTGTCCACGACAGAGACGCACG...CCCCCTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR CCA 90 bp GGGACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGATGAGTGAGTCCCACTaGGTGCGGGTCCCTGGAGCA +
Preference number: 2 (lower is better)
Translates to: GTDACAETAEGSVSGRCWMSESH*VRVPGA
Trigger: TGCTCCAGGGACCCGCACCCAGTGGGACTCACTCAT...CCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR GCA 90 bp GCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCAGGAACTTGCTGCTGTaGCTGCGTCGCGGCGGATCC +
Preference number: 2 (lower is better)
Translates to: ASFVLEELAAVPASRRIRRNLLL*LRRGGS
Trigger: GGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCT...GCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400918.7
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR GCA 90 bp CAGAACAGTCCCTCACACCTGGGCCCGGGCAGGCCAGCTTCGTGCTGGAGGAACGCTGGAGGAACTTGCTaGTGTGCCTGCGTCGCGGCG +
Preference number: 2 (lower is better)
Translates to: QNSPSHLGPGRPASCWRNAGGTC*CACVAA
Trigger: CGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGC...GTTCCTCCAGCACGAAGCTGGCCTGCCCGGGCCCAGGTGTGAGGGACTGTTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR GCA 90 bp CGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCCCGAGGGGGCTGTCATaGGGTTTCCAAGGTGCACAT +
Preference number: 2 (lower is better)
Translates to: RAGGTCCCACVAADPRGPPRGLS*GFQGAH
Trigger: ATGTGCACCTTGGAAACCGCATGACAGCCCCCTCGG...GGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000400918.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR TCA 90 bp CCTGGGCCCGGGCAGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGCAGAACTCGATGCACTaGCCTGCTCCGCCAGGAAAG +
Preference number: 2 (lower is better)
Translates to: PGPGQASFVLEELAAVPAQNSMH*PAPPGK
Trigger: CTTTCCTGGCGGAGCAGGTCAGTGCATCGAGTTCTG...CGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCCCGGGCCCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400918.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR GCA 90 bp CGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCACGTCACGTCTTCTGTaGTTTCGGCCAAGCACTGGG +
Preference number: 2 (lower is better)
Translates to: RAGGTCCCACVAADPRGPTSRLL*FRPSTG
Trigger: CCCAGTGCTTGGCCGAAAGCACAGAAGACGTGACGT...GGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428120.5
3UTR-3UTR GCA 90 bp GGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGTCCGTGAGTGGCGCCTaGCCCACATCTCAGACGCAA +
Preference number: 2 (lower is better)
Translates to: GQLRAGGTCCCACVAADPSVSGA*PTSQTQ
Trigger: TTGCGTCTGAGATGTGGGGCAGGCGCCACTCACGGA...CGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400918.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR GCA 90 bp GGGACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGGAAACAGAACTCGATaGACTGACCTGCTCCGCCAG +
Preference number: 2 (lower is better)
Translates to: GTDACAETAEGSVSGRCWGNRTR*TDLLRQ
Trigger: CTGGCGGAGCAGGTCAGTGCATCGAGTTCTGTTTCC...CCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR CCA 90 bp TGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGAGGCCAGCTTCGTGCTaGAGGAACTTGCTGCTGTGC +
Preference number: 2 (lower is better)
Translates to: CWRNLLLCLRRGGSAGTLRPASC*RNLLLC
Trigger: GCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCT...CAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400918.7
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR CCA 90 bp CCAAGCTGGAGAAGAAGCAGGCGCTCCCTCCATTCCAGCCACAGATCACAGACGCTGGGTGCGGGTCCCTaGAGCACCCCTCGGGCAGCC +
Preference number: 2 (lower is better)
Translates to: PSWRRSRRSLHSSHRSQTLGAGP*STPRAA
Trigger: GGCTGCCCGAGGGGTGCTCCAGGGACCCGCACCCAG...CGTCTGTGATCTGTGGCTGGAATGGAGGGAGCGCCTGCTTCTTCTCCAGCTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR CCA 90 bp GTCCGGGCGCCGCACTCTGCGCAGGGCTCTTGGATGGCGCTCACCACGTCACGTCTGGTCTCAAACTCCTaGGCTCCAGCAACCCACCTG +
Preference number: 2 (lower is better)
Translates to: VRAPHSAQGSWMALTTSRLVSNS*APATHL
Trigger: CAGGTGGGTTGCTGGAGCCCAGGAGTTTGAGACCAG...ACGTGACGTGGTGAGCGCCATCCAAGAGCCCTGCGCAGAGTGCGGCGCCCGGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440825.6
3UTR-3UTR CCA 90 bp GCGGATCCGCGGGGACCCTGCCGAGGGGGCTGTCATGCGGTTTCCAAGGTGCACTGGCCGGCTCTCCTGTaGATGACACTCACCCTTGAC +
Preference number: 2 (lower is better)
Translates to: ADPRGPCRGGCHAVSKVHWPALL*MTLTLD
Trigger: GTCAAGGGTGAGTGTCATCCACAGGAGAGCCGGCCA...GTGCACCTTGGAAACCGCATGACAGCCCCCTCGGCAGGGTCCCCGCGGATCCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428120.5
3UTR-3UTR CCA 90 bp GAGCGTGTCCGGGCGCCGCACTCTGCGCAGGGCTCTTGGATGGCGCTCACCACGCTGTCAACATCCAGCTaGGTCAGCTCTGTCACCCAG +
Preference number: 2 (lower is better)
Translates to: ERVRAPHSAQGSWMALTTLSTSS*VSSVTQ
Trigger: CTGGGTGACAGAGCTGACCCAGCTGGATGTTGACAG...CGTGGTGAGCGCCATCCAAGAGCCCTGCGCAGAGTGCGGCGCCCGGACACGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440825.6
3UTR-3UTR TCA 90 bp ATTGCTGTCCACCGAGGAGTCGGTGTGAGGCCGCGTGCGTCTCTGTCGTGGACAACCGAGGAGTCGGTGTaGGGCCGCGTGCGTCTCTGT +
Preference number: 2 (lower is better)
Translates to: IAVHRGVGVRPRASLSWTTEESV*GRVRLC
Trigger: ACAGAGACGCACGCGGCCTCACACCGACTCCTCGGT...TGTCCACGACAGAGACGCACGCGGCCTCACACCGACTCCTCGGTGGACAGCAAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR GCA 90 bp CCACCCGCCTGGTGTCATCTCTCCAGTGGGCGTTGGGGGAGGATTCTTATGCGAACTTGCTGCTGTGCCTaGGTCGCGGCGGATCCGCGG +
Preference number: 2 (lower is better)
Translates to: PPAWCHLSSGRWGRILMRTCCCA*VAADPR
Trigger: CCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGT...TCGCATAAGAATCCTCCCCCAACGCCCACTGGAGAGATGACACCAGGCGGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR GCA 90 bp CAACCCATTATTGCTGTCCACCGAGGAGTCGGTGTGAGGCCGCGTGCGTCTCTGACTTGCTGCTGTGCCTaGGTCGCGGCGGATCCGCGG +
Preference number: 2 (lower is better)
Translates to: QPIIAVHRGVGVRPRASLTCCCA*VAADPR
Trigger: CCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGT...CAGAGACGCACGCGGCCTCACACCGACTCCTCGGTGGACAGCAATAATGGGTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR GCA 90 bp TGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGGGAAACAGAACTCGATaGACTGACCTGCTCCGCCAG +
Preference number: 2 (lower is better)
Translates to: CWRNLLLCLRRGGSAGTLGNRTR*TDLLRQ
Trigger: CTGGCGGAGCAGGTCAGTGCATCGAGTTCTGTTTCC...CAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400918.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR GCA 90 bp GGAGAACACCAAGGCTGTGAGAAATGGGAGGCCTCCTGGCAGCTCCACTCCCCAGTCCCCCAGCTAGCCTaGCCATGCGGTGGCCACAGC +
Preference number: 2 (lower is better)
Translates to: GEHQGCEKWEASWQLHSPVPQLA*PCGGHS
Trigger: GCTGTGGCCACCGCATGGGCAGGCTAGCTGGGGGAC...TGGGGAGTGGAGCTGCCAGGAGGCCTCCCATTTCTCACAGCCTTGGTGTTCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420515.1
3UTR-3UTR CCA 90 bp GGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCTTTCGGCCAAGCACTaGGCCAGGTGGCTGTCAACA +
Preference number: 2 (lower is better)
Translates to: GQLRAGGTCCCACVAADPLSAKH*ARWLST
Trigger: TGTTGACAGCCACCTGGCCCAGTGCTTGGCCGAAAG...CGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428120.5
3UTR-3UTR CCA 90 bp AGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGAGGCCAGCTTCGTGCTaGAGGAACTTGCTGCTGTGC +
Preference number: 2 (lower is better)
Translates to: SFVLEELAAVPASRRIRGRPASC*RNLLLC
Trigger: GCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCT...CCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400918.7
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR CCA 90 bp GGCGTTGGGGGAGGATTCTTATGCGAACGTGACTCCGCTTCCCCCAAGGGAATGGGCAGGCCGGCACCTTaGGCAGCTGGTGACCCAGCC +
Preference number: 2 (lower is better)
Translates to: GVGGGFLCERDSASPKGMGRPAP*AAGDPA
Trigger: GGCTGGGTCACCAGCTGCCCAAGGTGCCGGCCTGCC...CATTCCCTTGGGGGAAGCGGAGTCACGTTCGCATAAGAATCCTCCCCCAACGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR CCA 90 bp ACGACTACGGTCTGGACAACTTTGACACACAGTTCACCAGCGAGCCCGTGCAGCCTGGGTGCGGGTCCCTaGAGCACCCCTCGGGCAGCC +
Preference number: 2 (lower is better)
Translates to: TTTVWTTLTHSSPASPCSLGAGP*STPRAA
Trigger: GGCTGCCCGAGGGGTGCTCCAGGGACCCGCACCCAG...GCTGCACGGGCTCGCTGGTGAACTGTGTGTCAAAGTTGTCCAGACCGTAGTCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR CCA 90 bp GTCCCACCCGCCTGGTGTCATCTCTCCAGTGGGCGTTGGGGGAGGATTCTTATGCACAGTGGGCCTGCGTaGGCGTGGTGCGGGGCAACT +
Preference number: 2 (lower is better)
Translates to: VPPAWCHLSSGRWGRILMHSGPA*AWCGAT
Trigger: AGTTGCCCCGCACCACGCCCACGCAGGCCCACTGTG...CATAAGAATCCTCCCCCAACGCCCACTGGAGAGATGACACCAGGCGGGTGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR CCA 90 bp TGTGCTTTCGGCCAAGCACTGGGCCAGGTGGCTGTCAACATCCAGCTGGGTCAGCACAGTGGGCCTGCGTaGGCGTGGTGCGGGGCAACT +
Preference number: 2 (lower is better)
Translates to: CAFGQALGQVAVNIQLGQHSGPA*AWCGAT
Trigger: AGTTGCCCCGCACCACGCCCACGCAGGCCCACTGTG...CTGACCCAGCTGGATGTTGACAGCCACCTGGCCCAGTGCTTGGCCGAAAGCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428120.5
3UTR-3UTR TCA 90 bp ATCCGCGGGGACCCTGCCGAGGGGGCTGTCATGCGGTTTCCAAGGTGCACATTTGCTCCGCCAGGAAAGTaGGCGTGTAGCGTCCTGAGG +
Preference number: 2 (lower is better)
Translates to: IRGDPAEGAVMRFPRCTFAPPGK*ACSVLR
Trigger: CCTCAGGACGCTACACGCTCACTTTCCTGGCGGAGC...AAATGTGCACCTTGGAAACCGCATGACAGCCCCCTCGGCAGGGTCCCCGCGGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400918.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR GCA 90 bp CCCTGCCGAGGGGGCTGTCATGCGGTTTCCAAGGTGCACATTTTCCACGGAAACACTTGCTGCTGTGCCTaGGTCGCGGCGGATCCGCGG +
Preference number: 2 (lower is better)
Translates to: PCRGGCHAVSKVHIFHGNTCCCA*VAADPR
Trigger: CCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGT...GTTTCCGTGGAAAATGTGCACCTTGGAAACCGCATGACAGCCCCCTCGGCAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400918.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR GCA 90 bp ATCCGCGGGGACCCTGCCGAGGGGGCTGTCATGCGGTTTCCAAGGTGCACATTTAGGAACTTGCTGCTGTaGCTGCGTCGCGGCGGATCC +
Preference number: 2 (lower is better)
Translates to: IRGDPAEGAVMRFPRCTFRNLLL*LRRGGS
Trigger: GGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCT...AAATGTGCACCTTGGAAACCGCATGACAGCCCCCTCGGCAGGGTCCCCGCGGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400918.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR GCA 90 bp CCACCCGCCTGGTGTCATCTCTCCAGTGGGCGTTGGGGGAGGATTCTTATGCGAAGCGTCAGCGGGCGCTaGTGGGAGCAGAACAGTCCC +
Preference number: 2 (lower is better)
Translates to: PPAWCHLSSGRWGRILMRSVSGR*WEQNSP
Trigger: GGGACTGTTCTGCTCCCAGCAGCGCCCGCTGACGCT...TCGCATAAGAATCCTCCCCCAACGCCCACTGGAGAGATGACACCAGGCGGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR GCA 90 bp AGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAGCAGAACAGTCCCTCACCTCGATGCACTGACCTaGTCCGCCAGGAAAGTGAGC +
Preference number: 2 (lower is better)
Translates to: RPQREASAGAAGSRTVPHLDALT*SARKVS
Trigger: GCTCACTTTCCTGGCGGAGCAGGTCAGTGCATCGAG...GTGAGGGACTGTTCTGCTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR GCA 90 bp AAGAAGCAGGCGCTCCCTCCATTCCAGCCACAGATCACAGACGACTACGGTCTGGATCCGCGGGGACCCTaGCGAGGGGGCTGTCATGCG +
Preference number: 2 (lower is better)
Translates to: KKQALPPFQPQITDDYGLDPRGP*RGGCHA
Trigger: CGCATGACAGCCCCCTCGGCAGGGTCCCCGCGGATC...CAGACCGTAGTCGTCTGTGATCTGTGGCTGGAATGGAGGGAGCGCCTGCTTCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR GCA 90 bp AGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAGCAGAACAGTCCCTCACCACAGGTGTGGAAATTaGCACGCAGCCCTCTTGGCC +
Preference number: 2 (lower is better)
Translates to: RPQREASAGAAGSRTVPHHRCGN*HAALLA
Trigger: GGCCAAGAGGGCTGCGTGGCAATTTCCACACCTGTG...GTGAGGGACTGTTCTGCTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR CCA 90 bp GAGACAGACAGGAGCCCGCCCTGCTTTAATGCGCATGCGGGGGAGCCGAGAGGCCTTTCGGCCAAGCACTaGGCCAGGTGGCTGTCAACA +
Preference number: 2 (lower is better)
Translates to: ETDRSPPCFNAHAGEPRGLSAKH*ARWLST
Trigger: TGTTGACAGCCACCTGGCCCAGTGCTTGGCCGAAAG...GCCTCTCGGCTCCCCCGCATGCGCATTAAAGCAGGGCGGGCTCCTGTCTGTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378543.2
3UTR-3UTR CCA 90 bp AACACAGAGACAGACAGGAGCCCGCCCTGCTTTAATGCGCATGCGGGGGAGCCGCGCAGGGCTCTTGGATaGCGCTCACCACGTCACGTC +
Preference number: 2 (lower is better)
Translates to: NTETDRSPPCFNAHAGEPRRALG*RSPRHV
Trigger: GACGTGACGTGGTGAGCGCCATCCAAGAGCCCTGCG...CGGCTCCCCCGCATGCGCATTAAAGCAGGGCGGGCTCCTGTCTGTCTCTGTGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378543.2
3UTR-3UTR CCA 90 bp TATTGCTGTCCACCGAGGAGTCGGTGTGAGGCCGCGTGCGTCTCTGTCGTGGACGTCAGCGGGCGCTGCTaGGAGCAGAACAGTCCCTCA +
Preference number: 2 (lower is better)
Translates to: YCCPPRSRCEAACVSVVDVSGRC*EQNSPS
Trigger: TGAGGGACTGTTCTGCTCCCAGCAGCGCCCGCTGAC...GTCCACGACAGAGACGCACGCGGCCTCACACCGACTCCTCGGTGGACAGCAATA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR CCA 90 bp CTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAGGGGGCTGTCATGCCACGACGGTGTCTTTTaGAAGTGGTTCTCGAAAACT +
Preference number: 2 (lower is better)
Translates to: LCLRRGGSAGTLPRGLSCHDGVF*KWFSKT
Trigger: AGTTTTCGAGAACCACTTCCAAAAGACACCGTCGTG...GCATGACAGCCCCCTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR CAA 90 bp CTGCCCTTGAGTCCCACCCGCCTGGTGTCATCTCTCCAGTGGGCGTaGGGGGAGGATTCTTATGCGAACGTGACTCCGCTTCCCCCAAGG +
Preference number: 2 (lower is better)
Translates to: LPLSPTRLVSSLQWA*GEDSYANVTPLPPR
Trigger: CCTTGGGGGAAGCGGAGTCACGTTCGCATAAGAATCCTCCCCCAACGCCCACTGGAGAGATGACACCAGGCGGGTGGGACTCAAGGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR TCA 90 bp GGCGTTGGGGGAGGATTCTTATGCGAACGTGACTCCGCTTCCCCCAAGGGAATGGCGAGCCCGTGCAGCTaGCCCCAGACGATGAGTGAG +
Preference number: 2 (lower is better)
Translates to: GVGGGFLCERDSASPKGMASPCS*PQTMSE
Trigger: CTCACTCATCGTCTGGGGTCAGCTGCACGGGCTCGC...CATTCCCTTGGGGGAAGCGGAGTCACGTTCGCATAAGAATCCTCCCCCAACGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR CCA 90 bp GTTTTTCCAAGCTGGAGAAGAAGCAGGCGCTCCCTCCATTCCAGCCACAGATCACCTCGGGCAGCCCCATaGCAGGCCGGCACCTTGGGC +
Preference number: 2 (lower is better)
Translates to: VFPSWRRSRRSLHSSHRSPRAAP*QAGTLG
Trigger: GCCCAAGGTGCCGGCCTGCCATGGGGCTGCCCGAGG...TGATCTGTGGCTGGAATGGAGGGAGCGCCTGCTTCTTCTCCAGCTTGGAAAAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR CCA 90 bp GTGGCTAAATACTGCCGTGTTGCCAGTAGCGTGCCGGTTACCAGTTTGGCCGTTGGGCCTGCGTGGGCGTaGTGCGGGGCAACTGCCCAT +
Preference number: 2 (lower is better)
Translates to: VAKYCRVASSVPVTSLAVGPAWA*CGATAH
Trigger: ATGGGCAGTTGCCCCGCACCACGCCCACGCAGGCCC...AACGGCCAAACTGGTAACCGGCACGCTACTGGCAACACGGCAGTATTTAGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR GCA 90 bp GTCCCACCCGCCTGGTGTCATCTCTCCAGTGGGCGTTGGGGGAGGATTCTTATGGGCAGGCCAGCTTCGTaGTGGAGGAACTTGCTGCTG +
Preference number: 2 (lower is better)
Translates to: VPPAWCHLSSGRWGRILMGRPAS*WRNLLL
Trigger: CAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCC...CATAAGAATCCTCCCCCAACGCCCACTGGAGAGATGACACCAGGCGGGTGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR CCA 90 bp CCAAGCTGGAGAAGAAGCAGGCGCTCCCTCCATTCCAGCCACAGATCACAGACGGTCAGCGGGCGCTGCTaGGAGCAGAACAGTCCCTCA +
Preference number: 2 (lower is better)
Translates to: PSWRRSRRSLHSSHRSQTVSGRC*EQNSPS
Trigger: TGAGGGACTGTTCTGCTCCCAGCAGCGCCCGCTGAC...CGTCTGTGATCTGTGGCTGGAATGGAGGGAGCGCCTGCTTCTTCTCCAGCTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR CCA 90 bp CGGGCAGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGCAGACGACTACGGTCTaGACAACTTTGACACACAGT +
Preference number: 2 (lower is better)
Translates to: RAGQLRAGGTCCCACVAAQTTTV*TTLTHS
Trigger: ACTGTGTGTCAAAGTTGTCCAGACCGTAGTCGTCTG...CGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR CCA 90 bp ATCCGCGGGGACCCTGCCGAGGGGGCTGTCATGCGGTTTCCAAGGTGCACATTTCCTGGTGCACAGGTGTaGAAATTGCCACGCAGCCCT +
Preference number: 2 (lower is better)
Translates to: IRGDPAEGAVMRFPRCTFPGAQV*KLPRSP
Trigger: AGGGCTGCGTGGCAATTTCCACACCTGTGCACCAGG...AAATGTGCACCTTGGAAACCGCATGACAGCCCCCTCGGCAGGGTCCCCGCGGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR TCA 90 bp ATCCGCGGGGACCCTGCCGAGGGGGCTGTCATGCGGTTTCCAAGGTGCACATTTATGCCCGCGCGGAGCTaGCCCTTCTCCTATTGTTTT +
Preference number: 2 (lower is better)
Translates to: IRGDPAEGAVMRFPRCTFMPARS*PFSYCF
Trigger: AAAACAATAGGAGAAGGGTCAGCTCCGCGCGGGCAT...AAATGTGCACCTTGGAAACCGCATGACAGCCCCCTCGGCAGGGTCCCCGCGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR TCA 90 bp AGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGAGCGTGTAGCGTCCTaGGGAATAAAATGTTCCGAT +
Preference number: 2 (lower is better)
Translates to: SFVLEELAAVPASRRIRGERVAS*GIKCSD
Trigger: ATCGGAACATTTTATTCCTCAGGACGCTACACGCTC...CCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400918.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR GCA 90 bp AAGAAGCAGGCGCTCCCTCCATTCCAGCCACAGATCACAGACGACTACGGTCTGAGGAACTTGCTGCTGTaGCTGCGTCGCGGCGGATCC +
Preference number: 2 (lower is better)
Translates to: KKQALPPFQPQITDDYGLRNLLL*LRRGGS
Trigger: GGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCT...CAGACCGTAGTCGTCTGTGATCTGTGGCTGGAATGGAGGGAGCGCCTGCTTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR GCA 90 bp TTTCCAAGCTGGAGAAGAAGCAGGCGCTCCCTCCATTCCAGCCACAGATCACAGGCTGGAGGAACTTGCTaGTGTGCCTGCGTCGCGGCG +
Preference number: 2 (lower is better)
Translates to: FPSWRRSRRSLHSSHRSQAGGTC*CACVAA
Trigger: CGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGC...CTGTGATCTGTGGCTGGAATGGAGGGAGCGCCTGCTTCTTCTCCAGCTTGGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR GCA 90 bp ACGACTACGGTCTGGACAACTTTGACACACAGTTCACCAGCGAGCCCGTGCAGCCGTGCTGGAGGAACTTaGTGCTGTGCCTGCGTCGCG +
Preference number: 2 (lower is better)
Translates to: TTTVWTTLTHSSPASPCSRAGGT*CCACVA
Trigger: CGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACG...GCTGCACGGGCTCGCTGGTGAACTGTGTGTCAAAGTTGTCCAGACCGTAGTCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR GCA 90 bp CCCTGCCGAGGGGGCTGTCATGCGGTTTCCAAGGTGCACATTTTCCACGGAAACGGCAGGCCAGCTTCGTaGTGGAGGAACTTGCTGCTG +
Preference number: 2 (lower is better)
Translates to: PCRGGCHAVSKVHIFHGNGRPAS*WRNLLL
Trigger: CAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCC...GTTTCCGTGGAAAATGTGCACCTTGGAAACCGCATGACAGCCCCCTCGGCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400918.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR GCA 90 bp CGCGGAGCTGACCCTTCTCCTATTGTTTTTCCAAGCTGGAGAAGAAGCAGGCGCCCAGGGACAGACGCTTaGGCCGAGACCGCAGAGGGA +
Preference number: 2 (lower is better)
Translates to: RGADPSPIVFPSWRRSRRPGTDA*AETAEG
Trigger: TCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCCCTGG...GCGCCTGCTTCTTCTCCAGCTTGGAAAAACAATAGGAGAAGGGTCAGCTCCGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR GCA 90 bp CCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAGCAGAACAGTCCCTATATCAACCCATTATTaGTGTCCACCGAGGAGTCGG +
Preference number: 2 (lower is better)
Translates to: PRPQREASAGAAGSRTVPISTHY*CPPRSR
Trigger: CCGACTCCTCGGTGGACAGCAATAATGGGTTGATAT...AGGGACTGTTCTGCTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR GCA 90 bp CGCGGAGCTGACCCTTCTCCTATTGTTTTTCCAAGCTGGAGAAGAAGCAGGCGCGGCAGGGCTGCCAGCTaGCAGGTGTCAGGTGTGGCA +
Preference number: 2 (lower is better)
Translates to: RGADPSPIVFPSWRRSRRGRAAS*QVSGVA
Trigger: TGCCACACCTGACACCTGGCAGCTGGCAGCCCTGCC...GCGCCTGCTTCTTCTCCAGCTTGGAAAAACAATAGGAGAAGGGTCAGCTCCGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR CCA 90 bp CAGGCACGCGCCACCACGCCCAGGCATGTAAAGATGGGATCTTGCCATGTTGCCAAGCACTGGGCCAGGTaGCTGTCAACATCCAGCTGG +
Preference number: 2 (lower is better)
Translates to: QARATTPRHVKMGSCHVAKHWAR*LSTSSW
Trigger: CCAGCTGGATGTTGACAGCCACCTGGCCCAGTGCTT...GGCAACATGGCAAGATCCCATCTTTACATGCCTGGGCGTGGTGGCGCGTGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440825.6
3UTR-3UTR CCA 90 bp CAACCCATTATTGCTGTCCACCGAGGAGTCGGTGTGAGGCCGCGTGCGTCTCTGAGGCCAGCTTCGTGCTaGAGGAACTTGCTGCTGTGC +
Preference number: 2 (lower is better)
Translates to: QPIIAVHRGVGVRPRASLRPASC*RNLLLC
Trigger: GCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCT...CAGAGACGCACGCGGCCTCACACCGACTCCTCGGTGGACAGCAATAATGGGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR TCA 90 bp CAGAACAGTCCCTCACACCTGGGCCCGGGCAGGCCAGCTTCGTGCTGGAGGAACGAGCGTGTAGCGTCCTaGGGAATAAAATGTTCCGAT +
Preference number: 2 (lower is better)
Translates to: QNSPSHLGPGRPASCWRNERVAS*GIKCSD
Trigger: ATCGGAACATTTTATTCCTCAGGACGCTACACGCTC...GTTCCTCCAGCACGAAGCTGGCCTGCCCGGGCCCAGGTGTGAGGGACTGTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR GCA 90 bp CAACCCATTATTGCTGTCCACCGAGGAGTCGGTGTGAGGCCGCGTGCGTCTCTGGGAAACAGAACTCGATaGACTGACCTGCTCCGCCAG +
Preference number: 2 (lower is better)
Translates to: QPIIAVHRGVGVRPRASLGNRTR*TDLLRQ
Trigger: CTGGCGGAGCAGGTCAGTGCATCGAGTTCTGTTTCC...CAGAGACGCACGCGGCCTCACACCGACTCCTCGGTGGACAGCAATAATGGGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR GCA 90 bp GCCTGTGCGGGACAGGGCGACGGTTCAAGACCAAGTCCGGCTGTTAGACCAGACATCCCAGGGTGGCTGTaGAAACCCTTGTTCCCAAAG +
Preference number: 2 (lower is better)
Translates to: ACAGQGDGSRPSPAVRPDIPGWL*KPLFPK
Trigger: CTTTGGGAACAAGGGTTTGCACAGCCACCCTGGGAT...GTCTGGTCTAACAGCCGGACTTGGTCTTGAACCGTCGCCCTGTCCCGCACAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420515.1
3UTR-3UTR CCA 90 bp AAGAAGCAGGCGCTCCCTCCATTCCAGCCACAGATCACAGACGACTACGGTCTGATGAGTGAGTCCCACTaGGTGCGGGTCCCTGGAGCA +
Preference number: 2 (lower is better)
Translates to: KKQALPPFQPQITDDYGLMSESH*VRVPGA
Trigger: TGCTCCAGGGACCCGCACCCAGTGGGACTCACTCAT...CAGACCGTAGTCGTCTGTGATCTGTGGCTGGAATGGAGGGAGCGCCTGCTTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR CCA 90 bp CAGCCACAGATCACAGACGACTACGGTCTGGACAACTTTGACACACAGTTCACCTTGGGGGCTGCACAGTaGGCCTGCGTGGGCGTGGTG +
Preference number: 2 (lower is better)
Translates to: QPQITDDYGLDNFDTQFTLGAAQ*ACVGVV
Trigger: CACCACGCCCACGCAGGCCCACTGTGCAGCCCCCAA...GGTGAACTGTGTGTCAAAGTTGTCCAGACCGTAGTCGTCTGTGATCTGTGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR CCA 90 bp CCACAGGCACGCGCCACCACGCCCAGGCATGTAAAGATGGGATCTTGCCATGTTCTGGTCTCAAACTCCTaGGCTCCAGCAACCCACCTG +
Preference number: 2 (lower is better)
Translates to: PQARATTPRHVKMGSCHVLVSNS*APATHL
Trigger: CAGGTGGGTTGCTGGAGCCCAGGAGTTTGAGACCAG...AACATGGCAAGATCCCATCTTTACATGCCTGGGCGTGGTGGCGCGTGCCTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420515.1
ENST00000440825.6
3UTR-3UTR TCA 90 bp GGGACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGAGAGTTCGAAGGCTTTaGGTATATCAACCCATTATT +
Preference number: 2 (lower is better)
Translates to: GTDACAETAEGSVSGRCWRVRRL*VYQPII
Trigger: AATAATGGGTTGATATACTCAAAGCCTTCGAACTCT...CCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR TCA 90 bp CAATCTGGTAGGGATGATGCCCGCGCGGAGCTGACCCTTCTCCTATTGTTTTTCGGTGGGGGCGGGAGTTaGAGTACCCCTCAGGTGAAG +
Preference number: 2 (lower is better)
Translates to: QSGRDDARAELTLLLLFFGGGGS*STPQVK
Trigger: CTTCACCTGAGGGGTACTTCAACTCCCGCCCCCACC...GAAAAACAATAGGAGAAGGGTCAGCTCCGCGCGGGCATCATCCCTACCAGATTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR GCA 90 bp TTTCCAAGCTGGAGAAGAAGCAGGCGCTCCCTCCATTCCAGCCACAGATCACAGGGCAGGCCAGCTTCGTaGTGGAGGAACTTGCTGCTG +
Preference number: 2 (lower is better)
Translates to: FPSWRRSRRSLHSSHRSQGRPAS*WRNLLL
Trigger: CAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCC...CTGTGATCTGTGGCTGGAATGGAGGGAGCGCCTGCTTCTTCTCCAGCTTGGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR CCA 90 bp ACTTCACTACAGCCTCCAATTCCTGGCTCAAGGGAATCCTCCCACTTCAGCCTCCGCAGGGCTCTTGGATaGCGCTCACCACGTCACGTC +
Preference number: 2 (lower is better)
Translates to: TSLQPPIPGSRESSHFSLRRALG*RSPRHV
Trigger: GACGTGACGTGGTGAGCGCCATCCAAGAGCCCTGCG...GAGGCTGAAGTGGGAGGATTCCCTTGAGCCAGGAATTGGAGGCTGTAGTGAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440825.6
3UTR-3UTR CCA 90 bp GGCGTTGGGGGAGGATTCTTATGCGAACGTGACTCCGCTTCCCCCAAGGGAATGGTGTCATCTCTCCAGTaGGCGTTGGGGGAGGATTCT +
Preference number: 2 (lower is better)
Translates to: GVGGGFLCERDSASPKGMVSSLQ*ALGEDS
Trigger: AGAATCCTCCCCCAACGCCCACTGGAGAGATGACAC...CATTCCCTTGGGGGAAGCGGAGTCACGTTCGCATAAGAATCCTCCCCCAACGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR CCA 90 bp GGCGTTGGGGGAGGATTCTTATGCGAACGTGACTCCGCTTCCCCCAAGGGAATGAAAACTCTGGTGACTTaGGGGCTGCACAGTGGGCCT +
Preference number: 2 (lower is better)
Translates to: GVGGGFLCERDSASPKGMKTLVT*GLHSGP
Trigger: AGGCCCACTGTGCAGCCCCCAAGTCACCAGAGTTTT...CATTCCCTTGGGGGAAGCGGAGTCACGTTCGCATAAGAATCCTCCCCCAACGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR CCA 90 bp CAGTGGGCGTTGGGGGAGGATTCTTATGCGAACGTGACTCCGCTTCCCCCAAGGCCTCTGAGTGAGGCCTaGTGCACAGGTGTGGAAATT +
Preference number: 2 (lower is better)
Translates to: QWALGEDSYANVTPLPPRPLSEA*CTGVEI
Trigger: AATTTCCACACCTGTGCACCAGGCCTCACTCAGAGG...CCTTGGGGGAAGCGGAGTCACGTTCGCATAAGAATCCTCCCCCAACGCCCACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR TCA 90 bp ACCTGGGCCCGGGCAGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTTTCATTTTGTGATTaGAGTGCGTGCAAAACACTC +
Preference number: 2 (lower is better)
Translates to: TWARAGQLRAGGTCCCACVSFCD*SACKTL
Trigger: GAGTGTTTTGCACGCACTTCAATCACAAAATGAAAC...GCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCCCGGGCCCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR TCA 90 bp ACCTGGGCCCGGGCAGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCCACTGTTTCATTTTGTaGTTGAAGTGCGTGCAAAAC +
Preference number: 2 (lower is better)
Translates to: TWARAGQLRAGGTCCCACHCFIL*LKCVQN
Trigger: GTTTTGCACGCACTTCAATCACAAAATGAAACAGTG...GCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCCCGGGCCCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR TCA 90 bp GCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCTGGTTTGAAAAATCCTaGTATTTGCTAATGGCTCCG +
Preference number: 2 (lower is better)
Translates to: ASFVLEELAAVPASRRIRWFEKS*YLLMAP
Trigger: CGGAGCCATTAGCAAATATCAGGATTTTTCAAACCA...GCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR TCA 90 bp CCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAGCAGAACAGTCCCTCTTGTACACAATATGTaGGTAATGCTGTGCTCATCA +
Preference number: 2 (lower is better)
Translates to: PRPQREASAGAAGSRTVPLVHNM*VMLCSS
Trigger: TGATGAGCACAGCATTACTCACATATTGTGTACAAG...AGGGACTGTTCTGCTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR TCA 90 bp CAATCTGGTAGGGATGATGCCCGCGCGGAGCTGACCCTTCTCCTATTGTTTTTCCCTCATGCCTCTGAGTaGGGCCTGGTGCACAGGTGT +
Preference number: 2 (lower is better)
Translates to: QSGRDDARAELTLLLLFFPHASE*GLVHRC
Trigger: ACACCTGTGCACCAGGCCTCACTCAGAGGCATGAGG...GAAAAACAATAGGAGAAGGGTCAGCTCCGCGCGGGCATCATCCCTACCAGATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR TCA 90 bp GCTCCAGGCTCAGCAGGCGCCTGTGCGGGACAGGGCGACGGTTCAAGACCAAGTCTACTTAGGAAAAATTaGGGCAGTCTGCCAAGCTTT +
Preference number: 2 (lower is better)
Translates to: APGSAGACAGQGDGSRPSLLRKN*GSLPSF
Trigger: AAAGCTTGGCAGACTGCCTCAATTTTTCCTAAGTAG...ACTTGGTCTTGAACCGTCGCCCTGTCCCGCACAGGCGCCTGCTGAGCCTGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420515.1
3UTR-3UTR GCA 90 bp CTATTGTTTTTCCAAGCTGGAGAAGAAGCAGGCGCTCCCTCCATTCCAGCCACAAGGAACTTGCTGCTGTaGCTGCGTCGCGGCGGATCC +
Preference number: 2 (lower is better)
Translates to: LLFFQAGEEAGAPSIPATRNLLL*LRRGGS
Trigger: GGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCT...TGTGGCTGGAATGGAGGGAGCGCCTGCTTCTTCTCCAGCTTGGAAAAACAATAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR GCA 90 bp CTATTGTTTTTCCAAGCTGGAGAAGAAGCAGGCGCTCCCTCCATTCCAGCCACACGTGCTGGAGGAACTTaGTGCTGTGCCTGCGTCGCG +
Preference number: 2 (lower is better)
Translates to: LLFFQAGEEAGAPSIPATRAGGT*CCACVA
Trigger: CGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACG...TGTGGCTGGAATGGAGGGAGCGCCTGCTTCTTCTCCAGCTTGGAAAAACAATAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR GCA 90 bp AAGAAGCAGGCGCTCCCTCCATTCCAGCCACAGATCACAGACGACTACGGTCTGGGGGGAGGATTCTTATaGGAACGTGACTCCGCTTCC +
Preference number: 2 (lower is better)
Translates to: KKQALPPFQPQITDDYGLGGGFL*ERDSAS
Trigger: GGAAGCGGAGTCACGTTCGCATAAGAATCCTCCCCC...CAGACCGTAGTCGTCTGTGATCTGTGGCTGGAATGGAGGGAGCGCCTGCTTCTT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR GCA 90 bp CGCGGAGCTGACCCTTCTCCTATTGTTTTTCCAAGCTGGAGAAGAAGCAGGCGCCTCGATGCACTGACCTaGTCCGCCAGGAAAGTGAGC +
Preference number: 2 (lower is better)
Translates to: RGADPSPIVFPSWRRSRRLDALT*SARKVS
Trigger: GCTCACTTTCCTGGCGGAGCAGGTCAGTGCATCGAG...GCGCCTGCTTCTTCTCCAGCTTGGAAAAACAATAGGAGAAGGGTCAGCTCCGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR CCA 90 bp TCATCTCTCCAGTGGGCGTTGGGGGAGGATTCTTATGCGAACGTGACTCCGCTTAAGCACTGGGCCAGGTaGCTGTCAACATCCAGCTGG +
Preference number: 2 (lower is better)
Translates to: SSLQWALGEDSYANVTPLKHWAR*LSTSSW
Trigger: CCAGCTGGATGTTGACAGCCACCTGGCCCAGTGCTT...AAGCGGAGTCACGTTCGCATAAGAATCCTCCCCCAACGCCCACTGGAGAGATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428120.5
3UTR-3UTR TCA 90 bp AAGAAGCAGGCGCTCCCTCCATTCCAGCCACAGATCACAGACGACTACGGTCTGCGGTCTGGACAACTTTaGCACACAGTTCACCAGCGA +
Preference number: 2 (lower is better)
Translates to: KKQALPPFQPQITDDYGLRSGQL*HTVHQR
Trigger: TCGCTGGTGAACTGTGTGTCAAAGTTGTCCAGACCG...CAGACCGTAGTCGTCTGTGATCTGTGGCTGGAATGGAGGGAGCGCCTGCTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR TCA 90 bp AGTCCCTCACACCTGGGCCCGGGCAGGCCAGCTTCGTGCTGGAGGAACTTGCTGAATAAAATGTTCCGATaGTGTGGAAGCTCCTCTGAT +
Preference number: 2 (lower is better)
Translates to: SPSHLGPGRPASCWRNLLNKMFR*CGSSSD
Trigger: ATCAGAGGAGCTTCCACATCATCGGAACATTTTATT...CAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCCCGGGCCCAGGTGTGAGGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400918.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR TCA 90 bp TGGCTAAATACTGCCGTGTTGCCAGTAGCGTGCCGGTTACCAGTTTGGCCGTTCTCTCGAAAACTCTGGTaGCTTGGGGGCTGCACAGTG +
Preference number: 2 (lower is better)
Translates to: WLNTAVLPVACRLPVWPFSRKLW*LGGCTV
Trigger: CACTGTGCAGCCCCCAAGTCACCAGAGTTTTCGAGA...GAACGGCCAAACTGGTAACCGGCACGCTACTGGCAACACGGCAGTATTTAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR TCA 90 bp CAGCCACAGATCACAGACGACTACGGTCTGGACAACTTTGACACACAGTTCACCCCTCATGCCTCTGAGTaGGGCCTGGTGCACAGGTGT +
Preference number: 2 (lower is better)
Translates to: QPQITDDYGLDNFDTQFTPHASE*GLVHRC
Trigger: ACACCTGTGCACCAGGCCTCACTCAGAGGCATGAGG...GGTGAACTGTGTGTCAAAGTTGTCCAGACCGTAGTCGTCTGTGATCTGTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR TCA 90 bp CTATTGTTTTTCCAAGCTGGAGAAGAAGCAGGCGCTCCCTCCATTCCAGCCACAACAGCTGTCCAGAGCTaGGGCTTCCTAGAGGCAGGG +
Preference number: 2 (lower is better)
Translates to: LLFFQAGEEAGAPSIPATTAVQS*GFLEAG
Trigger: CCCTGCCTCTAGGAAGCCTCAGCTCTGGACAGCTGT...TGTGGCTGGAATGGAGGGAGCGCCTGCTTCTTCTCCAGCTTGGAAAAACAATAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR TCA 90 bp ACTCAATCTGGTAGGGATGATGCCCGCGCGGAGCTGACCCTTCTCCTATTGTTTGAAGTACCCCTCAGGTaGAGGCACAGCTGTCCAGAG +
Preference number: 2 (lower is better)
Translates to: TQSGRDDARAELTLLLLFEVPLR*RHSCPE
Trigger: CTCTGGACAGCTGTGCCTTCACCTGAGGGGTACTTC...AAACAATAGGAGAAGGGTCAGCTCCGCGCGGGCATCATCCCTACCAGATTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR GCA 90 bp GCCCGCGCGGAGCTGACCCTTCTCCTATTGTTTTTCCAAGCTGGAGAAGAAGCACGCTCCACCCCATTGTaGGGCTGGTGGCTAAATACT +
Preference number: 2 (lower is better)
Translates to: ARAELTLLLLFFQAGEEARSTPL*GWWLNT
Trigger: AGTATTTAGCCACCAGCCGCACAATGGGGTGGAGCG...TGCTTCTTCTCCAGCTTGGAAAAACAATAGGAGAAGGGTCAGCTCCGCGCGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR GCA 90 bp CTTCTGTGCTTTCGGCCAAGCACTGGGCCAGGTGGCTGTCAACATCCAGCTGGGACACTCACCCTTGACTaGCAGGGTCATTCAAAGTCT +
Preference number: 2 (lower is better)
Translates to: LLCFRPSTGPGGCQHPAGTLTLD*QGHSKS
Trigger: AGACTTTGAATGACCCTGGCAGTCAAGGGTGAGTGT...CCCAGCTGGATGTTGACAGCCACCTGGCCCAGTGCTTGGCCGAAAGCACAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428120.5
3UTR-3UTR CCA 90 bp TTTCATCACAACACAGAGACAGACAGGAGCCCGCCCTGCTTTAATGCGCATGCGAAGCACTGGGCCAGGTaGCTGTCAACATCCAGCTGG +
Preference number: 2 (lower is better)
Translates to: FHHNTETDRSPPCFNAHAKHWAR*LSTSSW
Trigger: CCAGCTGGATGTTGACAGCCACCTGGCCCAGTGCTT...CGCATGCGCATTAAAGCAGGGCGGGCTCCTGTCTGTCTCTGTGTTGTGATGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378543.2
3UTR-3UTR CCA 90 bp GTGGCTAAATACTGCCGTGTTGCCAGTAGCGTGCCGGTTACCAGTTTGGCCGTTACCCCATTGTGCGGCTaGTGGCTAAATACTGCCGTG +
Preference number: 2 (lower is better)
Translates to: VAKYCRVASSVPVTSLAVTPLCG*WLNTAV
Trigger: CACGGCAGTATTTAGCCACCAGCCGCACAATGGGGT...AACGGCCAAACTGGTAACCGGCACGCTACTGGCAACACGGCAGTATTTAGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR TCA 90 bp CAATCTGGTAGGGATGATGCCCGCGCGGAGCTGACCCTTCTCCTATTGTTTTTCATTCTTATGCGAACGTaGCTCCGCTTCCCCCAAGGG +
Preference number: 2 (lower is better)
Translates to: QSGRDDARAELTLLLLFFILMRT*LRFPQG
Trigger: CCCTTGGGGGAAGCGGAGTCACGTTCGCATAAGAAT...GAAAAACAATAGGAGAAGGGTCAGCTCCGCGCGGGCATCATCCCTACCAGATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR TCA 90 bp AACCCTTGTTCCCAAAGATATGGGGCTTGTCCCCCAGCTAGCCTGCCCATGCGGGTGTTCGAATGTGCTTaGAGCATTCCAGACACACCA +
Preference number: 2 (lower is better)
Translates to: NPCSQRYGACPPASLPMRVFECA*SIPDTP
Trigger: TGGTGTGTCTGGAATGCTTCAAGCACATTCGAACAC...CCGCATGGGCAGGCTAGCTGGGGGACAAGCCCCATATCTTTGGGAACAAGGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420515.1
3UTR-3UTR GCA 90 bp TCTCCTATTGTTTTTCCAAGCTGGAGAAGAAGCAGGCGCTCCCTCCATTCCAGCCCGAGGGGGCTGTCATaGGGTTTCCAAGGTGCACAT +
Preference number: 2 (lower is better)
Translates to: SPIVFPSWRRSRRSLHSSPRGLS*GFQGAH
Trigger: ATGTGCACCTTGGAAACCGCATGACAGCCCCCTCGG...GCTGGAATGGAGGGAGCGCCTGCTTCTTCTCCAGCTTGGAAAAACAATAGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR CCA 90 bp GTTTTTCCAAGCTGGAGAAGAAGCAGGCGCTCCCTCCATTCCAGCCACAGATCAGTGTCATCTCTCCAGTaGGCGTTGGGGGAGGATTCT +
Preference number: 2 (lower is better)
Translates to: VFPSWRRSRRSLHSSHRSVSSLQ*ALGEDS
Trigger: AGAATCCTCCCCCAACGCCCACTGGAGAGATGACAC...TGATCTGTGGCTGGAATGGAGGGAGCGCCTGCTTCTTCTCCAGCTTGGAAAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR TCA 90 bp TTTGCCCACAGGGATGCCATAAAGAGGATCGACCAGTCAGAGTTCGAAGGCTTTCAGAACTCGATGCACTaGCCTGCTCCGCCAGGAAAG +
Preference number: 2 (lower is better)
Translates to: FAHRDAIKRIDQSEFEGFQNSMH*PAPPGK
Trigger: CTTTCCTGGCGGAGCAGGTCAGTGCATCGAGTTCTG...AAAGCCTTCGAACTCTGACTGGTCGATCCTCTTTATGGCATCCCTGTGGGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR TCA 90 bp TTCCAGCCACAGATCACAGACGACTACGGTCTGGACAACTTTGACACACAGTTCGAAGTACCCCTCAGGTaGAGGCACAGCTGTCCAGAG +
Preference number: 2 (lower is better)
Translates to: FQPQITDDYGLDNFDTQFEVPLR*RHSCPE
Trigger: CTCTGGACAGCTGTGCCTTCACCTGAGGGGTACTTC...GAACTGTGTGTCAAAGTTGTCCAGACCGTAGTCGTCTGTGATCTGTGGCTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR GCA 90 bp AACACTCAATCTGGTAGGGATGATGCCCGCGCGGAGCTGACCCTTCTCCTATTGCTTTGCCCACAGGGATaGCATAAAGAGGATCGACCA +
Preference number: 2 (lower is better)
Translates to: NTQSGRDDARAELTLLLLLCPQG*HKEDRP
Trigger: TGGTCGATCCTCTTTATGGCATCCCTGTGGGCAAAG...CAATAGGAGAAGGGTCAGCTCCGCGCGGGCATCATCCCTACCAGATTGAGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR GCA 90 bp CCCATGCGGTGGCCACAGCCTCGGGTGAGTTCCGGTTCCAAAGTACCGGCTCTCCAAGCTTTCAGCAACTaGTTAAAAAGCTCAAAATGG +
Preference number: 2 (lower is better)
Translates to: PMRWPQPRVSSGSKVPALQAFSN*LKSSKW
Trigger: CCATTTTGAGCTTTTTAAGCAGTTGCTGAAAGCTTG...GAGAGCCGGTACTTTGGAACCGGAACTCACCCGAGGCTGTGGCCACCGCATGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420515.1
3UTR-3UTR CCA 90 bp CTTCTCCTATTGTTTTTCCAAGCTGGAGAAGAAGCAGGCGCTCCCTCCATTCCAAGGCCAGCTTCGTGCTaGAGGAACTTGCTGCTGTGC +
Preference number: 2 (lower is better)
Translates to: LLLLFFQAGEEAGAPSIPRPASC*RNLLLC
Trigger: GCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCT...TGGAATGGAGGGAGCGCCTGCTTCTTCTCCAGCTTGGAAAAACAATAGGAGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR GCA 90 bp ACTCAATCTGGTAGGGATGATGCCCGCGCGGAGCTGACCCTTCTCCTATTGTTTCTTTGCCCACAGGGATaGCATAAAGAGGATCGACCA +
Preference number: 2 (lower is better)
Translates to: TQSGRDDARAELTLLLLFLCPQG*HKEDRP
Trigger: TGGTCGATCCTCTTTATGGCATCCCTGTGGGCAAAG...AAACAATAGGAGAAGGGTCAGCTCCGCGCGGGCATCATCCCTACCAGATTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR GCA 90 bp TTTTTCCAAGCTGGAGAAGAAGCAGGCGCTCCCTCCATTCCAGCCACAGATCACCTTTGCCCACAGGGATaGCATAAAGAGGATCGACCA +
Preference number: 2 (lower is better)
Translates to: FFQAGEEAGAPSIPATDHLCPQG*HKEDRP
Trigger: TGGTCGATCCTCTTTATGGCATCCCTGTGGGCAAAG...GTGATCTGTGGCTGGAATGGAGGGAGCGCCTGCTTCTTCTCCAGCTTGGAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR CCA 90 bp ACCCTGCCGAGGGGGCTGTCATGCGGTTTCCAAGGTGCACATTTTCCACGGAAACACGACGGTGTCTTTTaGAAGTGGTTCTCGAAAACT +
Preference number: 2 (lower is better)
Translates to: TLPRGLSCGFQGAHFPRKHDGVF*KWFSKT
Trigger: AGTTTTCGAGAACCACTTCCAAAAGACACCGTCGTG...TTTCCGTGGAAAATGTGCACCTTGGAAACCGCATGACAGCCCCCTCGGCAGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR TCA 90 bp TTTTCCACGGAAACAGAACTCGATGCACTGACCTGCTCCGCCAGGAAAGTGAGCGAGCGTGTAGCGTCCTaGGGAATAAAATGTTCCGAT +
Preference number: 2 (lower is better)
Translates to: FSTETELDALTCSARKVSERVAS*GIKCSD
Trigger: ATCGGAACATTTTATTCCTCAGGACGCTACACGCTC...GCTCACTTTCCTGGCGGAGCAGGTCAGTGCATCGAGTTCTGTTTCCGTGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400918.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR TCA 90 bp AGGGTGGCTGTGCAAACCCTTGTTCCCAAAGATATGGGGCTTGTCCCCCAGCTAGCAAGTTTTTCCTCGTaGACGTCCTTGTCTTCAGAA +
Preference number: 2 (lower is better)
Translates to: RVAVQTLVPKDMGLVPQLASFSS*TSLSSE
Trigger: TTCTGAAGACAAGGACGTTCACGAGGAAAAACTTGC...TAGCTGGGGGACAAGCCCCATATCTTTGGGAACAAGGGTTTGCACAGCCACCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000420515.1
3UTR-3UTR GCA 90 bp GTGGCTAAATACTGCCGTGTTGCCAGTAGCGTGCCGGTTACCAGTTTGGCCGTTATGCGGTTTCCAAGGTaGACATTTTCCACGGAAACA +
Preference number: 2 (lower is better)
Translates to: VAKYCRVASSVPVTSLAVMRFPR*TFSTET
Trigger: TGTTTCCGTGGAAAATGTGCACCTTGGAAACCGCAT...AACGGCCAAACTGGTAACCGGCACGCTACTGGCAACACGGCAGTATTTAGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR GCA 90 bp CGCGGAGCTGACCCTTCTCCTATTGTTTTTCCAAGCTGGAGAAGAAGCAGGCGCATGCGGTTTCCAAGGTaGACATTTTCCACGGAAACA +
Preference number: 2 (lower is better)
Translates to: RGADPSPIVFPSWRRSRRMRFPR*TFSTET
Trigger: TGTTTCCGTGGAAAATGTGCACCTTGGAAACCGCAT...GCGCCTGCTTCTTCTCCAGCTTGGAAAAACAATAGGAGAAGGGTCAGCTCCGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR GCA 90 bp CGGCTGGTGGCTAAATACTGCCGTGTTGCCAGTAGCGTGCCGGTTACCAGTTTGGGTCATTCAAAGTCTTaGACATCCATGAAAGACACG +
Preference number: 2 (lower is better)
Translates to: RLVAKYCRVASSVPVTSLGHSKS*TSMKDT
Trigger: CGTGTCTTTCATGGATGTGCAAGACTTTGAATGACC...CAAACTGGTAACCGGCACGCTACTGGCAACACGGCAGTATTTAGCCACCAGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428120.5
3UTR-3UTR CCA 90 bp ACACCAAGGCCTGGACCTGACTTCATTGACGCCTACTTAGGAAAAATTGAGGCACTTCAGCCAAGAGCATaGATTTCTCCCCAGGGCTCC +
Preference number: 2 (lower is better)
Translates to: TPRPGPDFIDAYLGKIEALQPRA*ISPQGS
Trigger: GGAGCCCTGGGGAGAAATCCATGCTCTTGGCTGAAG...TGCCTCAATTTTTCCTAAGTAGGCGTCAATGAAGTCAGGTCCAGGCCTTGGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420515.1
3UTR-3UTR TCA 90 bp AAGAAGCAGGCGCTCCCTCCATTCCAGCCACAGATCACAGACGACTACGGTCTGGTTTCATTTTGTGATTaGAGTGCGTGCAAAACACTC +
Preference number: 2 (lower is better)
Translates to: KKQALPPFQPQITDDYGLVSFCD*SACKTL
Trigger: GAGTGTTTTGCACGCACTTCAATCACAAAATGAAAC...CAGACCGTAGTCGTCTGTGATCTGTGGCTGGAATGGAGGGAGCGCCTGCTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR TCA 90 bp ACCCTGCCGAGGGGGCTGTCATGCGGTTTCCAAGGTGCACATTTTCCACGGAAATGGTTTGAAAAATCCTaGTATTTGCTAATGGCTCCG +
Preference number: 2 (lower is better)
Translates to: TLPRGLSCGFQGAHFPRKWFEKS*YLLMAP
Trigger: CGGAGCCATTAGCAAATATCAGGATTTTTCAAACCA...TTTCCGTGGAAAATGTGCACCTTGGAAACCGCATGACAGCCCCCTCGGCAGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR TCA 90 bp AACACTCAATCTGGTAGGGATGATGCCCGCGCGGAGCTGACCCTTCTCCTATTGCTTGTACACAATATGTaGGTAATGCTGTGCTCATCA +
Preference number: 2 (lower is better)
Translates to: NTQSGRDDARAELTLLLLLVHNM*VMLCSS
Trigger: TGATGAGCACAGCATTACTCACATATTGTGTACAAG...CAATAGGAGAAGGGTCAGCTCCGCGCGGGCATCATCCCTACCAGATTGAGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR TCA 90 bp CTTCTCCTATTGTTTTTCCAAGCTGGAGAAGAAGCAGGCGCTCCCTCCATTCCAAATAAAATGTTCCGATaGTGTGGAAGCTCCTCTGAT +
Preference number: 2 (lower is better)
Translates to: LLLLFFQAGEEAGAPSIPNKMFR*CGSSSD
Trigger: ATCAGAGGAGCTTCCACATCATCGGAACATTTTATT...TGGAATGGAGGGAGCGCCTGCTTCTTCTCCAGCTTGGAAAAACAATAGGAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR TCA 90 bp TTCCAGCCACAGATCACAGACGACTACGGTCTGGACAACTTTGACACACAGTTCAATAAAATGTTCCGATaGTGTGGAAGCTCCTCTGAT +
Preference number: 2 (lower is better)
Translates to: FQPQITDDYGLDNFDTQFNKMFR*CGSSSD
Trigger: ATCAGAGGAGCTTCCACATCATCGGAACATTTTATT...GAACTGTGTGTCAAAGTTGTCCAGACCGTAGTCGTCTGTGATCTGTGGCTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR GCA 72 bp GCCCGGGCAGGCCAGCTTCGTGCTGGAGGAACTTGCTaGTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCC +
Preference number: 3 (lower is better)
Translates to: ARAGQLRAGGTC*CACVAADPRGP
Trigger: GGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCCCGGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400918.7
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR GCA 72 bp GCACAGTGGGCCTGCGTGGGCGTGGTGCGGGGCAACTaGCCATGGAGCCCGTGGCTGGCCGGCTCTCCTGTG +
Preference number: 3 (lower is better)
Translates to: AQWACVGVVRGN*PWSPWLAGSPV
Trigger: CACAGGAGAGCCGGCCAGCCACGGGCTCCATGGGCAGTTGCCCCGCACCACGCCCACGCAGGCCCACTGTGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR GCA 72 bp ACTTGGGGGCTGCACAGTGGGCCTGCGTGGGCGTGGTaGGGGGCAACTGCCCATGGAGCCCGTGGCTGGCCG +
Preference number: 3 (lower is better)
Translates to: TWGLHSGPAWAW*GATAHGARGWP
Trigger: CGGCCAGCCACGGGCTCCATGGGCAGTTGCCCCGCACCACGCCCACGCAGGCCCACTGTGCAGCCCCCAAGT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR GCA 72 bp GGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTaGGTCGCGGCGGATCCGCGGGGACCCTGCCGAGGG +
Preference number: 3 (lower is better)
Translates to: GQLRAGGTCCCA*VAADPRGPCRG
Trigger: CCCTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400918.7
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR GCA 72 bp GGCAGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTaGCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCG +
Preference number: 3 (lower is better)
Translates to: GRPASCWRNLLL*LRRGGSAGTLP
Trigger: CGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400918.7
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR GCA 72 bp TGGGCCCGGGCAGGCCAGCTTCGTGCTGGAGGAACTTaGTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGA +
Preference number: 3 (lower is better)
Translates to: WARAGQLRAGGT*CCACVAADPRG
Trigger: TCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCCCGGGCCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400918.7
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR CCA 72 bp GCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTaGGAGCAGAACAGTCCCTCACACCTGGGCCCGGGC +
Preference number: 3 (lower is better)
Translates to: AETAEGSVSGRC*EQNSPSHLGPG
Trigger: GCCCGGGCCCAGGTGTGAGGGACTGTTCTGCTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR CCA 72 bp GTGACTTGGGGGCTGCACAGTGGGCCTGCGTGGGCGTaGTGCGGGGCAACTGCCCATGGAGCCCGTGGCTGG +
Preference number: 3 (lower is better)
Translates to: VTWGLHSGPAWA*CGATAHGARGW
Trigger: CCAGCCACGGGCTCCATGGGCAGTTGCCCCGCACCACGCCCACGCAGGCCCACTGTGCAGCCCCCAAGTCAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR CAA 90 bp GCGGATCCGCGGGGACCCTGCCGAGGGGGCTGTCATGCGGTTTCCAAGGTGCACGCCAGGGACAGACGCTaGCGCCGAGACCGCAGAGGG +
Preference number: 3 (lower is better)
Translates to: ADPRGPCRGGCHAVSKVHARDRR*RRDRRG
Trigger: CCCTCTGCGGTCTCGGCGCAAGCGTCTGTCCCTGGC...GTGCACCTTGGAAACCGCATGACAGCCCCCTCGGCAGGGTCCCCGCGGATCCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR GCA 72 bp TGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTaGTGGGAGCAGAACAGTCCCTCACACCTGGGCCCG +
Preference number: 3 (lower is better)
Translates to: CAETAEGSVSGR*WEQNSPSHLGP
Trigger: CGGGCCCAGGTGTGAGGGACTGTTCTGCTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR GCA 72 bp TGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTaGCGAGGGGGCTGTCATGCGGTTTCCAAGGTGCAC +
Preference number: 3 (lower is better)
Translates to: CCACVAADPRGP*RGGCHAVSKVH
Trigger: GTGCACCTTGGAAACCGCATGACAGCCCCCTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400918.7
ENST00000414253.5
ENST00000428120.5
3UTR CCA 72 bp CCCTCACACCTGGGCCCGGGCAGGCCAGCTTCGTGCTaGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGA +
Preference number: 3 (lower is better)
Translates to: PSHLGPGRPASC*RNLLLCLRRGG
Trigger: TCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCCCGGGCCCAGGTGTGAGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400918.7
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR CAA 90 bp GCTGGGAGCAGAACAGTCCCTCACACCTGGGCCCGGGCAGGCCAGCTTCGTGCTGCCAGGGACAGACGCTaGCGCCGAGACCGCAGAGGG +
Preference number: 3 (lower is better)
Translates to: AGSRTVPHTWARAGQLRAARDRR*RRDRRG
Trigger: CCCTCTGCGGTCTCGGCGCAAGCGTCTGTCCCTGGC...AGCACGAAGCTGGCCTGCCCGGGCCCAGGTGTGAGGGACTGTTCTGCTCCCAGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR GCA 72 bp AGTCCCTCACACCTGGGCCCGGGCAGGCCAGCTTCGTaGTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGC +
Preference number: 3 (lower is better)
Translates to: SPSHLGPGRPAS*WRNLLLCLRRG
Trigger: GCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCCCGGGCCCAGGTGTGAGGGACT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400918.7
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR CCA 72 bp GTGGGCGTGGTGCGGGGCAACTGCCCATGGAGCCCGTaGCTGGCCGGCTCTCCTGTGGATGACACTCACCCT +
Preference number: 3 (lower is better)
Translates to: VGVVRGNCPWSP*LAGSPVDDTHP
Trigger: AGGGTGAGTGTCATCCACAGGAGAGCCGGCCAGCCACGGGCTCCATGGGCAGTTGCCCCGCACCACGCCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428120.5
3UTR CCA 72 bp GCGTGGTGCGGGGCAACTGCCCATGGAGCCCGTGGCTaGCCGGCTCTCCTGTGGATGACACTCACCCTTGAC +
Preference number: 3 (lower is better)
Translates to: AWCGATAHGARG*PALLWMTLTLD
Trigger: GTCAAGGGTGAGTGTCATCCACAGGAGAGCCGGCCAGCCACGGGCTCCATGGGCAGTTGCCCCGCACCACGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428120.5
3UTR TCA 72 bp GTTCACCAGCGAGCCCGTGCAGCTGACCCCAGACGATaGGTGAGTCCCACTGGGTGCGGGTCCCTGGAGCAC +
Preference number: 3 (lower is better)
Translates to: VHQRARAADPRR*VSPTGCGSLEH
Trigger: GTGCTCCAGGGACCCGCACCCAGTGGGACTCACTCATCGTCTGGGGTCAGCTGCACGGGCTCGCTGGTGAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR CCA 72 bp GTGTCCGGGCGCCGCACTCTGCGCAGGGCTCTTGGATaGCGCTCACCACGTCACGTCTTCTGTGCTTTCGGC +
Preference number: 3 (lower is better)
Translates to: VSGRRTLRRALG*RSPRHVFCAFG
Trigger: GCCGAAAGCACAGAAGACGTGACGTGGTGAGCGCCATCCAAGAGCCCTGCGCAGAGTGCGGCGCCCGGACAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378543.2
ENST00000440825.6
3UTR GCA 72 bp CTGTTAGACCAGACCCTCCAATCCAGGCGGCCTCCCTaGTGGGGTCCTGTGCGGTCAGGAGTCCCAGGGCAT +
Preference number: 3 (lower is better)
Translates to: LLDQTLQSRRPP*WGPVRSGVPGH
Trigger: ATGCCCTGGGACTCCTGACCGCACAGGACCCCAGCAGGGAGGCCGCCTGGATTGGAGGGTCTGGTCTAACAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420515.1
3UTR CCA 72 bp GAGCGTGTCCGGGCGCCGCACTCTGCGCAGGGCTCTTaGATGGCGCTCACCACGTCACGTCTTCTGTGCTTT +
Preference number: 3 (lower is better)
Translates to: ERVRAPHSAQGS*MALTTSRLLCF
Trigger: AAAGCACAGAAGACGTGACGTGGTGAGCGCCATCCAAGAGCCCTGCGCAGAGTGCGGCGCCCGGACACGCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378543.2
ENST00000440825.6
3UTR CCA 72 bp GGAGAACACCAAGGCTGTGAGAAATGGGAGGCCTCCTaGCAGCTCCACTCCCCAGACCCGCCTCTGCCAGGG +
Preference number: 3 (lower is better)
Translates to: GEHQGCEKWEAS*QLHSPDPPLPG
Trigger: CCCTGGCAGAGGCGGGTCTGGGGAGTGGAGCTGCCAGGAGGCCTCCCATTTCTCACAGCCTTGGTGTTCTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420515.1
3UTR-3UTR CAA 90 bp GCTGGGAGCAGAACAGTCCCTCACACCTGGGCCCGGGCAGGCCAGCTTCGTGCTTCTCTCCAGTGGGCGTaGGGGGAGGATTCTTATGCG +
Preference number: 3 (lower is better)
Translates to: AGSRTVPHTWARAGQLRASLQWA*GEDSYA
Trigger: CGCATAAGAATCCTCCCCCAACGCCCACTGGAGAGA...AGCACGAAGCTGGCCTGCCCGGGCCCAGGTGTGAGGGACTGTTCTGCTCCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR TCA 72 bp CTGGGAGAGGGGGTCGCGCCACCTCATGCCTCTGAGTaGGGCCTGGTGCACAGGTGTGGAAATTGCCACGCA +
Preference number: 3 (lower is better)
Translates to: LGEGVAPPHASE*GLVHRCGNCHA
Trigger: TGCGTGGCAATTTCCACACCTGTGCACCAGGCCTCACTCAGAGGCATGAGGTGGCGCGACCCCCTCTCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR TCA 72 bp CTCCCTGGGAGAGGGGGTCGCGCCACCTCATGCCTCTaGGTGAGGCCTGGTGCACAGGTGTGGAAATTGCCA +
Preference number: 3 (lower is better)
Translates to: LPGRGGRATSCL*VRPGAQVWKLP
Trigger: TGGCAATTTCCACACCTGTGCACCAGGCCTCACTCAGAGGCATGAGGTGGCGCGACCCCCTCTCCCAGGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR TCA 72 bp CAGCTAGCCTGCCCATGCGGTGGCCACAGCCTCGGGTaGGTTCCGGTTCCAAAGTACCGGCTCTCCCTTACG +
Preference number: 3 (lower is better)
Translates to: QLACPCGGHSLG*VPVPKYRLSLT
Trigger: CGTAAGGGAGAGCCGGTACTTTGGAACCGGAACTCACCCGAGGCTGTGGCCACCGCATGGGCAGGCTAGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420515.1
3UTR TCA 72 bp ACGGTCCTCTGGGTGACCCGGAGAACACCAAGGCTGTaGGAAATGGGAGGCCTCCTGGCAGCTCCACTCCCC +
Preference number: 3 (lower is better)
Translates to: TVLWVTRRTPRL*EMGGLLAAPLP
Trigger: GGGGAGTGGAGCTGCCAGGAGGCCTCCCATTTCTCACAGCCTTGGTGTTCTCCGGGTCACCCAGAGGACCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420515.1
3UTR GCA 72 bp CCAGAGCTGAGGCTTCCTAGAGGCAGGGCTGCCAGCTaGCAGGTGTCAGGTGTGGCAGAGCCGTCTTCTGAG +
Preference number: 3 (lower is better)
Translates to: PELRLPRGRAAS*QVSGVAEPSSE
Trigger: CTCAGAAGACGGCTCTGCCACACCTGACACCTGGCAGCTGGCAGCCCTGCCTCTAGGAAGCCTCAGCTCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR CCA 72 bp AGGGGGTCGCGCCACCTCATGCCTCTGAGTGAGGCCTaGTGCACAGGTGTGGAAATTGCCACGCAGCCCTCT +
Preference number: 3 (lower is better)
Translates to: RGSRHLMPLSEA*CTGVEIATQPS
Trigger: AGAGGGCTGCGTGGCAATTTCCACACCTGTGCACCAGGCCTCACTCAGAGGCATGAGGTGGCGCGACCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR CAA 90 bp AAGAAGCAGGCGCTCCCTCCATTCCAGCCACAGATCACAGACGACTACGGTCTGGCCAGGGACAGACGCTaGCGCCGAGACCGCAGAGGG +
Preference number: 3 (lower is better)
Translates to: KKQALPPFQPQITDDYGLARDRR*RRDRRG
Trigger: CCCTCTGCGGTCTCGGCGCAAGCGTCTGTCCCTGGC...CAGACCGTAGTCGTCTGTGATCTGTGGCTGGAATGGAGGGAGCGCCTGCTTCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR CCA 72 bp TATGGGGCTTGTCCCCCAGCTAGCCTGCCCATGCGGTaGCCACAGCCTCGGGTGAGTTCCGGTTCCAAAGTA +
Preference number: 3 (lower is better)
Translates to: YGACPPASLPMR*PQPRVSSGSKV
Trigger: TACTTTGGAACCGGAACTCACCCGAGGCTGTGGCCACCGCATGGGCAGGCTAGCTGGGGGACAAGCCCCATA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420515.1
3UTR CCA 72 bp ACTGCCCATGGAGCCCGTGGCTGGCCGGCTCTCCTGTaGATGACACTCACCCTTGACTGCCAGGGTCATTCA +
Preference number: 3 (lower is better)
Translates to: TAHGARGWPALL*MTLTLDCQGHS
Trigger: TGAATGACCCTGGCAGTCAAGGGTGAGTGTCATCCACAGGAGAGCCGGCCAGCCACGGGCTCCATGGGCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428120.5
3UTR TCA 72 bp CCCATGGAGCCCGTGGCTGGCCGGCTCTCCTGTGGATaGCACTCACCCTTGACTGCCAGGGTCATTCAAAGT +
Preference number: 3 (lower is better)
Translates to: PMEPVAGRLSCG*HSPLTARVIQS
Trigger: ACTTTGAATGACCCTGGCAGTCAAGGGTGAGTGTCATCCACAGGAGAGCCGGCCAGCCACGGGCTCCATGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428120.5
3UTR GCA 72 bp TTTCATCACAACACAGAGACAGACAGGAGCCCGCCCTaGTTTAATGCGCATGCGGGGGAGCCGAGAGGCGGG +
Preference number: 3 (lower is better)
Translates to: FHHNTETDRSPP*FNAHAGEPRGG
Trigger: CCCGCCTCTCGGCTCCCCCGCATGCGCATTAAAGCAGGGCGGGCTCCTGTCTGTCTCTGTGTTGTGATGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378543.2
ENST00000378546.9
3UTR GCA 72 bp GGCTCTTGGATGGCGCTCACCACGTCACGTCTTCTGTaGTTTCGGCCAAGCACTGGGCCAGGTGGCTGTCAA +
Preference number: 3 (lower is better)
Translates to: GSWMALTTSRLL*FRPSTGPGGCQ
Trigger: TTGACAGCCACCTGGCCCAGTGCTTGGCCGAAAGCACAGAAGACGTGACGTGGTGAGCGCCATCCAAGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378543.2
ENST00000440825.6
3UTR CCA 72 bp CCCTTGAGTCCCACCCGCCTGGTGTCATCTCTCCAGTaGGCGTTGGGGGAGGATTCTTATGCGAACGTGACT +
Preference number: 3 (lower is better)
Translates to: PLSPTRLVSSLQ*ALGEDSYANVT
Trigger: AGTCACGTTCGCATAAGAATCCTCCCCCAACGCCCACTGGAGAGATGACACCAGGCGGGTGGGACTCAAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR CAA 90 bp ACGACTACGGTCTGGACAACTTTGACACACAGTTCACCAGCGAGCCCGTGCAGCGAAAACTCTGGTGACTaGGGGGCTGCACAGTGGGCC +
Preference number: 3 (lower is better)
Translates to: TTTVWTTLTHSSPASPCSENSGD*GAAQWA
Trigger: GGCCCACTGTGCAGCCCCCAAGTCACCAGAGTTTTC...GCTGCACGGGCTCGCTGGTGAACTGTGTGTCAAAGTTGTCCAGACCGTAGTCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR CAA 90 bp AGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAGCAGAACAGTCCCTCACTCACGACGGTGTCTTTaGGAAGTGGTTCTCGAAAAC +
Preference number: 3 (lower is better)
Translates to: RPQREASAGAAGSRTVPHSRRCL*EVVLEN
Trigger: GTTTTCGAGAACCACTTCCAAAAGACACCGTCGTGA...GTGAGGGACTGTTCTGCTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR CAA 90 bp TGGCTAAATACTGCCGTGTTGCCAGTAGCGTGCCGGTTACCAGTTTGGCCGTTCGAAAACTCTGGTGACTaGGGGGCTGCACAGTGGGCC +
Preference number: 3 (lower is better)
Translates to: WLNTAVLPVACRLPVWPFENSGD*GAAQWA
Trigger: GGCCCACTGTGCAGCCCCCAAGTCACCAGAGTTTTC...GAACGGCCAAACTGGTAACCGGCACGCTACTGGCAACACGGCAGTATTTAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR TCA 72 bp TCCAGTGGGCGTTGGGGGAGGATTCTTATGCGAACGTaGCTCCGCTTCCCCCAAGGGAATGAACACACGGTC +
Preference number: 3 (lower is better)
Translates to: SSGRWGRILMRT*LRFPQGNEHTV
Trigger: GACCGTGTGTTCATTCCCTTGGGGGAAGCGGAGTCACGTTCGCATAAGAATCCTCCCCCAACGCCCACTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR CAA 90 bp GGCGTTGGGGGAGGATTCTTATGCGAACGTGACTCCGCTTCCCCCAAGGGAATGCTAAATACTGCCGTGTaGCCAGTAGCGTGCCGGTTA +
Preference number: 3 (lower is better)
Translates to: GVGGGFLCERDSASPKGMLNTAV*PVACRL
Trigger: TAACCGGCACGCTACTGGCAACACGGCAGTATTTAG...CATTCCCTTGGGGGAAGCGGAGTCACGTTCGCATAAGAATCCTCCCCCAACGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR TCA 72 bp GCCACAGATCACAGACGACTACGGTCTGGACAACTTTaGCACACAGTTCACCAGCGAGCCCGTGCAGCTGAC +
Preference number: 3 (lower is better)
Translates to: ATDHRRLRSGQL*HTVHQRARAAD
Trigger: GTCAGCTGCACGGGCTCGCTGGTGAACTGTGTGTCAAAGTTGTCCAGACCGTAGTCGTCTGTGATCTGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR GCA 72 bp GTCATCTCTCCAGTGGGCGTTGGGGGAGGATTCTTATaGGAACGTGACTCCGCTTCCCCCAAGGGAATGAAC +
Preference number: 3 (lower is better)
Translates to: VISPVGVGGGFL*ERDSASPKGMN
Trigger: GTTCATTCCCTTGGGGGAAGCGGAGTCACGTTCGCATAAGAATCCTCCCCCAACGCCCACTGGAGAGATGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR GCA 72 bp GACCCTGCCGAGGGGGCTGTCATGCGGTTTCCAAGGTaGACATTTTCCACGGAAACAGAACTCGATGCACTG +
Preference number: 3 (lower is better)
Translates to: DPAEGAVMRFPR*TFSTETELDAL
Trigger: CAGTGCATCGAGTTCTGTTTCCGTGGAAAATGTGCACCTTGGAAACCGCATGACAGCCCCCTCGGCAGGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400918.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR CAA 90 bp GGCGTTGGGGGAGGATTCTTATGCGAACGTGACTCCGCTTCCCCCAAGGGAATGGTGCCGGTTACCAGTTaGGCCGTTCTTGTACACAAT +
Preference number: 3 (lower is better)
Translates to: GVGGGFLCERDSASPKGMVPVTS*AVLVHN
Trigger: ATTGTGTACAAGAACGGCCAAACTGGTAACCGGCAC...CATTCCCTTGGGGGAAGCGGAGTCACGTTCGCATAAGAATCCTCCCCCAACGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR TCA 72 bp TGGCTGGCCGGCTCTCCTGTGGATGACACTCACCCTTaGCTGCCAGGGTCATTCAAAGTCTTGCACATCCAT +
Preference number: 3 (lower is better)
Translates to: WLAGSPVDDTHP*LPGSFKVLHIH
Trigger: ATGGATGTGCAAGACTTTGAATGACCCTGGCAGTCAAGGGTGAGTGTCATCCACAGGAGAGCCGGCCAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428120.5
3UTR CCA 72 bp CTCCATTCCAGCCACAGATCACAGACGACTACGGTCTaGACAACTTTGACACACAGTTCACCAGCGAGCCCG +
Preference number: 3 (lower is better)
Translates to: LHSSHRSQTTTV*TTLTHSSPASP
Trigger: CGGGCTCGCTGGTGAACTGTGTGTCAAAGTTGTCCAGACCGTAGTCGTCTGTGATCTGTGGCTGGAATGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR CAA 90 bp GCCCGCGCGGAGCTGACCCTTCTCCTATTGTTTTTCCAAGCTGGAGAAGAAGCAACGGTCTGGACAACTTaGACACACAGTTCACCAGCG +
Preference number: 3 (lower is better)
Translates to: ARAELTLLLLFFQAGEEATVWTT*THSSPA
Trigger: CGCTGGTGAACTGTGTGTCAAAGTTGTCCAGACCGT...TGCTTCTTCTCCAGCTTGGAAAAACAATAGGAGAAGGGTCAGCTCCGCGCGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR CAA 90 bp AACCCTTGTTCCCAAAGATATGGGGCTTGTCCCCCAGCTAGCCTGCCCATGCGGAGTGTTCGAATGTGCTaGAAGCATTCCAGACACACC +
Preference number: 3 (lower is better)
Translates to: NPCSQRYGACPPASLPMRSVRMC*KHSRHT
Trigger: GGTGTGTCTGGAATGCTTCAAGCACATTCGAACACT...CCGCATGGGCAGGCTAGCTGGGGGACAAGCCCCATATCTTTGGGAACAAGGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420515.1
3UTR TCA 72 bp CCGGCTCTCCCTTACGATCAAGTGTTCGAATGTGCTTaGAGCATTCCAGACACACCAAGGCCTGGACCTGAC +
Preference number: 3 (lower is better)
Translates to: PALPYDQVFECA*SIPDTPRPGPD
Trigger: GTCAGGTCCAGGCCTTGGTGTGTCTGGAATGCTTCAAGCACATTCGAACACTTGATCGTAAGGGAGAGCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420515.1
3UTR GCA 72 bp CAGAGTTCGAAGGCTTTGAGTATATCAACCCATTATTaGTGTCCACCGAGGAGTCGGTGTGAGGCCGCGTGC +
Preference number: 3 (lower is better)
Translates to: QSSKALSISTHY*CPPRSRCEAAC
Trigger: GCACGCGGCCTCACACCGACTCCTCGGTGGACAGCAATAATGGGTTGATATACTCAAAGCCTTCGAACTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR GCA 72 bp TCTTGCACATCCATGAAAGACACGTCACGTCTTCTGTaGTTTCGGCCAAGCACTGGGCCAGGTGGCTGTCAA +
Preference number: 3 (lower is better)
Translates to: SCTSMKDTSRLL*FRPSTGPGGCQ
Trigger: TTGACAGCCACCTGGCCCAGTGCTTGGCCGAAAGCACAGAAGACGTGACGTGTCTTTCATGGATGTGCAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428120.5
3UTR CCA 72 bp ACAGCAACAAGGATCTCAGAGCTTCAGCCAAGAGCATaGATTTCTCCCCAGGGCTCCCAACAGTACCCTCTG +
Preference number: 3 (lower is better)
Translates to: TATRISELQPRA*ISPQGSQQYPL
Trigger: CAGAGGGTACTGTTGGGAGCCCTGGGGAGAAATCCATGCTCTTGGCTGAAGCTCTGAGATCCTTGTTGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420515.1
3UTR-3UTR CAA 90 bp ACGACTACGGTCTGGACAACTTTGACACACAGTTCACCAGCGAGCCCGTGCAGCTATATCAACCCATTATaGCTGTCCACCGAGGAGTCG +
Preference number: 3 (lower is better)
Translates to: TTTVWTTLTHSSPASPCSYINPL*LSTEES
Trigger: CGACTCCTCGGTGGACAGCAATAATGGGTTGATATA...GCTGCACGGGCTCGCTGGTGAACTGTGTGTCAAAGTTGTCCAGACCGTAGTCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR CAA 90 bp CGGCTGGTGGCTAAATACTGCCGTGTTGCCAGTAGCGTGCCGGTTACCAGTTTGTCACGACGGTGTCTTTaGGAAGTGGTTCTCGAAAAC +
Preference number: 3 (lower is better)
Translates to: RLVAKYCRVASSVPVTSLSRRCL*EVVLEN
Trigger: GTTTTCGAGAACCACTTCCAAAAGACACCGTCGTGA...CAAACTGGTAACCGGCACGCTACTGGCAACACGGCAGTATTTAGCCACCAGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR TCA 72 bp ACACTCAATCTGGTAGGGATGATGCCCGCGCGGAGCTaGCCCTTCTCCTATTGTTTTTCCAAGCTGGAGAAG +
Preference number: 3 (lower is better)
Translates to: TLNLVGMMPARS*PFSYCFSKLEK
Trigger: CTTCTCCAGCTTGGAAAAACAATAGGAGAAGGGTCAGCTCCGCGCGGGCATCATCCCTACCAGATTGAGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR TCA 72 bp GACCTGCTCCGCCAGGAAAGTGAGCGTGTAGCGTCCTaGGGAATAAAATGTTCCGATGATGTGGAAGCTCCT +
Preference number: 3 (lower is better)
Translates to: DLLRQESERVAS*GIKCSDDVEAP
Trigger: AGGAGCTTCCACATCATCGGAACATTTTATTCCTCAGGACGCTACACGCTCACTTTCCTGGCGGAGCAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400918.7
ENST00000414253.5
ENST00000428120.5
3UTR GCA 72 bp TCCAAGGTGCACATTTTCCACGGAAACAGAACTCGATaGACTGACCTGCTCCGCCAGGAAAGTGAGCGTGTA +
Preference number: 3 (lower is better)
Translates to: SKVHIFHGNRTR*TDLLRQESERV
Trigger: TACACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCATCGAGTTCTGTTTCCGTGGAAAATGTGCACCTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400918.7
ENST00000414253.5
ENST00000428120.5
3UTR GCA 72 bp GGCTGGTGGCTAAATACTGCCGTGTTGCCAGTAGCGTaGCGGTTACCAGTTTGGCCGTTCTTGTACACAATA +
Preference number: 3 (lower is better)
Translates to: GWWLNTAVLPVA*RLPVWPFLYTI
Trigger: TATTGTGTACAAGAACGGCCAAACTGGTAACCGGCACGCTACTGGCAACACGGCAGTATTTAGCCACCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR GCA 72 bp AGTACCGGCTCTCCCTTACGATCAAGTGTTCGAATGTaGTTGAAGCATTCCAGACACACCAAGGCCTGGACC +
Preference number: 3 (lower is better)
Translates to: STGSPLRSSVRM*LKHSRHTKAWT
Trigger: GGTCCAGGCCTTGGTGTGTCTGGAATGCTTCAAGCACATTCGAACACTTGATCGTAAGGGAGAGCCGGTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420515.1
3UTR GCA 72 bp TGGCCGGCTCTCCTGTGGATGACACTCACCCTTGACTaGCAGGGTCATTCAAAGTCTTGCACATCCATGAAA +
Preference number: 3 (lower is better)
Translates to: WPALLWMTLTLD*QGHSKSCTSMK
Trigger: TTTCATGGATGTGCAAGACTTTGAATGACCCTGGCAGTCAAGGGTGAGTGTCATCCACAGGAGAGCCGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428120.5
3UTR-3UTR CAA 90 bp CTATTGTTTTTCCAAGCTGGAGAAGAAGCAGGCGCTCCCTCCATTCCAGCCACAACGGTCTGGACAACTTaGACACACAGTTCACCAGCG +
Preference number: 3 (lower is better)
Translates to: LLFFQAGEEAGAPSIPATTVWTT*THSSPA
Trigger: CGCTGGTGAACTGTGTGTCAAAGTTGTCCAGACCGT...TGTGGCTGGAATGGAGGGAGCGCCTGCTTCTTCTCCAGCTTGGAAAAACAATAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR CAA 90 bp TTTTTCCAAGCTGGAGAAGAAGCAGGCGCTCCCTCCATTCCAGCCACAGATCACTATATCAACCCATTATaGCTGTCCACCGAGGAGTCG +
Preference number: 3 (lower is better)
Translates to: FFQAGEEAGAPSIPATDHYINPL*LSTEES
Trigger: CGACTCCTCGGTGGACAGCAATAATGGGTTGATATA...GTGATCTGTGGCTGGAATGGAGGGAGCGCCTGCTTCTTCTCCAGCTTGGAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR CAA 90 bp TGGGCGTTGGGGGAGGATTCTTATGCGAACGTGACTCCGCTTCCCCCAAGGGAACAGAGTTCGAAGGCTTaGAGTATATCAACCCATTAT +
Preference number: 3 (lower is better)
Translates to: WALGEDSYANVTPLPPREQSSKA*SISTHY
Trigger: ATAATGGGTTGATATACTCAAAGCCTTCGAACTCTG...TTCCCTTGGGGGAAGCGGAGTCACGTTCGCATAAGAATCCTCCCCCAACGCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR CAA 90 bp TCTCCTATTGTTTTTCCAAGCTGGAGAAGAAGCAGGCGCTCCCTCCATTCCAGCGTGCCGGTTACCAGTTaGGCCGTTCTTGTACACAAT +
Preference number: 3 (lower is better)
Translates to: SPIVFPSWRRSRRSLHSSVPVTS*AVLVHN
Trigger: ATTGTGTACAAGAACGGCCAAACTGGTAACCGGCAC...GCTGGAATGGAGGGAGCGCCTGCTTCTTCTCCAGCTTGGAAAAACAATAGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR GCA 72 bp ACACTCACCCTTGACTGCCAGGGTCATTCAAAGTCTTaGACATCCATGAAAGACACGTCACGTCTTCTGTGC +
Preference number: 3 (lower is better)
Translates to: TLTLDCQGHSKS*TSMKDTSRLLC
Trigger: GCACAGAAGACGTGACGTGTCTTTCATGGATGTGCAAGACTTTGAATGACCCTGGCAGTCAAGGGTGAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428120.5
3UTR CCA 72 bp ATATTTGCTAATGGCTCCGGTCACGACGGTGTCTTTTaGAAGTGGTTCTCGAAAACTCTGGTGACTTGGGGG +
Preference number: 3 (lower is better)
Translates to: IFANGSGHDGVF*KWFSKTLVTWG
Trigger: CCCCCAAGTCACCAGAGTTTTCGAGAACCACTTCCAAAAGACACCGTCGTGACCGGAGCCATTAGCAAATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR-3UTR CAA 90 bp TTTTTCCAAGCTGGAGAAGAAGCAGGCGCTCCCTCCATTCCAGCCACAGATCACCAGAGTTCGAAGGCTTaGAGTATATCAACCCATTAT +
Preference number: 3 (lower is better)
Translates to: FFQAGEEAGAPSIPATDHQSSKA*SISTHY
Trigger: ATAATGGGTTGATATACTCAAAGCCTTCGAACTCTG...GTGATCTGTGGCTGGAATGGAGGGAGCGCCTGCTTCTTCTCCAGCTTGGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR TCA 72 bp CATAAAGAGGATCGACCAGTCAGAGTTCGAAGGCTTTaGGTATATCAACCCATTATTGCTGTCCACCGAGGA +
Preference number: 3 (lower is better)
Translates to: HKEDRPVRVRRL*VYQPIIAVHRG
Trigger: TCCTCGGTGGACAGCAATAATGGGTTGATATACTCAAAGCCTTCGAACTCTGACTGGTCGATCCTCTTTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
3UTR TCA 72 bp AGTGAAGGATGTATTGAAGTGTGGTTTGAAAAATCCTaGTATTTGCTAATGGCTCCGGTCACGACGGTGTCT +
Preference number: 3 (lower is better)
Translates to: SEGCIEVWFEKS*YLLMAPVTTVS
Trigger: AGACACCGTCGTGACCGGAGCCATTAGCAAATATCAGGATTTTTCAAACCACACTTCAATACATCCTTCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR GCA 72 bp TTCATTGACGCCTACTTAGGAAAAATTGAGGCAGTCTaGCAAGCTTTCAGCAACTGCTTAAAAAGCTCAAAA +
Preference number: 3 (lower is better)
Translates to: FIDAYLGKIEAV*QAFSNCLKSSK
Trigger: TTTTGAGCTTTTTAAGCAGTTGCTGAAAGCTTGGCAGACTGCCTCAATTTTTCCTAAGTAGGCGTCAATGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000420515.1
CDS-3UTR GCA 90 bp AGGCGGGGCTGCTGGCGGGGGAGAGCGTGTCCGGGCGCCGCACTCTGCGCAGGGTCCACAGACGGCTGCTaGTCCACCCTGGGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: RRGCWRGRACPGAALCAGSTDGC*STLGAL
Trigger: CAGGGCCCCCAGGGTGGAGCAGCAGCCGTCTGTGGA...CCCTGCGCAGAGTGCGGCGCCCGGACACGCTCTCCCCCGCCAGCAGCCCCGCCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000378543.2
ENST00000378546.9
ENST00000440825.6
CDS-3UTR GCA 90 bp GGGCTGCTGGCGGGGGAGAGCGTGTCCGGGCGCCGCACTCTGCGCAGGGCTCTTGGCACATGGGGCAGCTaGGCAGGGCCGCGGCACCCT +
Preference number: 4 (lower is better)
Translates to: GLLAGESVSGRRTLRRALGTWGS*AGPRHP
Trigger: AGGGTGCCGCGGCCCTGCGCAGCTGCCCCATGTGCC...AAGAGCCCTGCGCAGAGTGCGGCGCCCGGACACGCTCTCCCCCGCCAGCAGCCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378543.2
ENST00000378546.9
ENST00000440825.6
CDS-3UTR GCA 90 bp GGCTGCTGGCGGGGGAGAGCGTGTCCGGGCGCCGCACTCTGCGCAGGGCTCTTGCCCTCCACAGACGGCTaGTGCTCCACCCTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: GCWRGRACPGAALCAGLLPSTDG*CSTLGA
Trigger: GGCCCCCAGGGTGGAGCAGCAGCCGTCTGTGGAGGG...CAAGAGCCCTGCGCAGAGTGCGGCGCCCGGACACGCTCTCCCCCGCCAGCAGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000378543.2
ENST00000378546.9
ENST00000440825.6
CDS-3UTR GCA 90 bp GGGCTGCTGGCGGGGGAGAGCGTGTCCGGGCGCCGCACTCTGCGCAGGGCTCTTCCCTCCACAGACGGCTaGTGCTCCACCCTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: GLLAGESVSGRRTLRRALPSTDG*CSTLGA
Trigger: GGCCCCCAGGGTGGAGCAGCAGCCGTCTGTGGAGGG...AAGAGCCCTGCGCAGAGTGCGGCGCCCGGACACGCTCTCCCCCGCCAGCAGCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000378543.2
ENST00000378546.9
ENST00000440825.6
CDS-3UTR GCA 90 bp CTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAGGGGGCTGTCATGCGATCCGCGGGGACCCTaGCGAGGGGGCTGTCATGCG +
Preference number: 4 (lower is better)
Translates to: LCLRRGGSAGTLPRGLSCDPRGP*RGGCHA
Trigger: CGCATGACAGCCCCCTCGGCAGGGTCCCCGCGGATC...GCATGACAGCCCCCTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000400918.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp GCGGGGCTGCTGGCGGGGGAGAGCGTGTCCGGGCGCCGCACTCTGCGCAGGGCTACTCCTTCTGGCACATaGGGCAGCTGCGCAGGGCCG +
Preference number: 4 (lower is better)
Translates to: AGLLAGESVSGRRTLRRATPSGT*GSCAGP
Trigger: CGGCCCTGCGCAGCTGCCCCATGTGCCAGAAGGAGT...AGCCCTGCGCAGAGTGCGGCGCCCGGACACGCTCTCCCCCGCCAGCAGCCCCGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378543.2
ENST00000378546.9
ENST00000440825.6
CDS-3UTR CCA 90 bp AGGCGGGGCTGCTGGCGGGGGAGAGCGTGTCCGGGCGCCGCACTCTGCGCAGGGGGGGCGAACTCCTTCTaGCACATGGGGCAGCTGCGC +
Preference number: 4 (lower is better)
Translates to: RRGCWRGRACPGAALCAGGANSF*HMGQLR
Trigger: GCGCAGCTGCCCCATGTGCCAGAAGGAGTTCGCCCC...CCCTGCGCAGAGTGCGGCGCCCGGACACGCTCTCCCCCGCCAGCAGCCCCGCCT
74% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000378543.2
ENST00000378546.9
ENST00000440825.6
CDS-3UTR CCA 90 bp TGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAGGGGGCTGTCATCTGGGTGCGGGTCCCTaGAGCACCCCTCGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: CCACVAADPRGPCRGGCHLGAGP*STPRAA
Trigger: GGCTGCCCGAGGGGTGCTCCAGGGACCCGCACCCAG...ATGACAGCCCCCTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
3UTR CAA 72 bp CTGGGCCCGGGCAGGCCAGCTTCGTGCTGGAGGAACTaGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGG +
Preference number: 4 (lower is better)
Translates to: LGPGRPASCWRN*LLCLRRGGSAG
Trigger: CCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCCCGGGCCCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400918.7
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp CTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAGGGGGCTGTCAGGCAGAGCCGTCTTCTaGGCTCCCTGGGAGAGGGGG +
Preference number: 4 (lower is better)
Translates to: LLCLRRGGSAGTLPRGLSGRAVF*APWERG
Trigger: CCCCCTCTCCCAGGGAGCTCAGAAGACGGCTCTGCC...TGACAGCCCCCTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp GCGTGGGCGTGGTGCGGGGCAACTGCCCATGGAGCCCGTGGCTGGCCGGCTCTCGGCAGAGCCGTCTTCTaGGCTCCCTGGGAGAGGGGG +
Preference number: 4 (lower is better)
Translates to: AWAWCGATAHGARGWPALGRAVF*APWERG
Trigger: CCCCCTCTCCCAGGGAGCTCAGAAGACGGCTCTGCC...GAGAGCCGGCCAGCCACGGGCTCCATGGGCAGTTGCCCCGCACCACGCCCACGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp GCGGGGCTGCTGGCGGGGGAGAGCGTGTCCGGGCGCCGCACTCTGCGCAGGGCTTTCCAGGTGCCCTCCTaGCCCGTGAAGCAGCCGGTA +
Preference number: 4 (lower is better)
Translates to: AGLLAGESVSGRRTLRRAFQVPS*PVKQPV
Trigger: TACCGGCTGCTTCACGGGGCAGGAGGGCACCTGGAA...AGCCCTGCGCAGAGTGCGGCGCCCGGACACGCTCTCCCCCGCCAGCAGCCCCGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378543.2
ENST00000378546.9
ENST00000440825.6
CDS-3UTR GCA 90 bp AACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAGGGGGCCCTCCACAGACGGCTaGTGCTCCACCCTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: NLLLCLRRGGSAGTLPRGPSTDG*CSTLGA
Trigger: GGCCCCCAGGGTGGAGCAGCAGCCGTCTGTGGAGGG...CCCCCTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000400918.7
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp GTGGGCCTGCGTGGGCGTGGTGCGGGGCAACTGCCCATGGAGCCCGTGGCTGGCCACAGTGGGCCTGCGTaGGCGTGGTGCGGGGCAACT +
Preference number: 4 (lower is better)
Translates to: VGLRGRGAGQLPMEPVAGHSGPA*AWCGAT
Trigger: AGTTGCCCCGCACCACGCCCACGCAGGCCCACTGTG...GCCAGCCACGGGCTCCATGGGCAGTTGCCCCGCACCACGCCCACGCAGGCCCAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp TGGGGGCTGCACAGTGGGCCTGCGTGGGCGTGGTGCGGGGCAACTGCCCATGGACCCTCCACAGACGGCTaGTGCTCCACCCTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: WGLHSGPAWAWCGATAHGPSTDG*CSTLGA
Trigger: GGCCCCCAGGGTGGAGCAGCAGCCGTCTGTGGAGGG...TCCATGGGCAGTTGCCCCGCACCACGCCCACGCAGGCCCACTGTGCAGCCCCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp CGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCGATCCGCGGGGACCCTaGCGAGGGGGCTGTCATGCG +
Preference number: 4 (lower is better)
Translates to: RAGGTCCCACVAADPRGPDPRGP*RGGCHA
Trigger: CGCATGACAGCCCCCTCGGCAGGGTCCCCGCGGATC...GGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000400918.7
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp CTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAGGGGGCTGTCAGCTGGAGGAACTTGCTaGTGTGCCTGCGTCGCGGCG +
Preference number: 4 (lower is better)
Translates to: LLCLRRGGSAGTLPRGLSAGGTC*CACVAA
Trigger: CGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGC...TGACAGCCCCCTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400918.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp CTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAGGGGGCTGTCAGGCAGGGCTGCCAGCTaGCAGGTGTCAGGTGTGGCA +
Preference number: 4 (lower is better)
Translates to: LLCLRRGGSAGTLPRGLSGRAAS*QVSGVA
Trigger: TGCCACACCTGACACCTGGCAGCTGGCAGCCCTGCC...TGACAGCCCCCTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp CGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCGGCAGGCCGGCACCTTaGGCAGCTGGTGACCCAGCC +
Preference number: 4 (lower is better)
Translates to: RAGGTCCCACVAADPRGPGRPAP*AAGDPA
Trigger: GGCTGGGTCACCAGCTGCCCAAGGTGCCGGCCTGCC...GGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp GTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTCCTCGGGCAGCCCCATaGCAGGCCGGCACCTTGGGC +
Preference number: 4 (lower is better)
Translates to: VLEELAAVPASRRIRGDPPRAAP*QAGTLG
Trigger: GCCCAAGGTGCCGGCCTGCCATGGGGCTGCCCGAGG...AGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp GCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAGGGGGCTGTCATGTGGGAAGGCGGGCAGTaGAGGCACCTCGTGATCCAG +
Preference number: 4 (lower is better)
Translates to: AVPASRRIRGDPAEGAVMWEGGQ*RHLVIQ
Trigger: CTGGATCACGAGGTGCCTTCACTGCCCGCCTTCCCA...CATGACAGCCCCCTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400918.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp GGCGGGGGAGAGCGTGTCCGGGCGCCGCACTCTGCGCAGGGCTCTTGGATGGCGTTCCAGGTGCCCTCCTaGCCCGTGAAGCAGCCGGTA +
Preference number: 4 (lower is better)
Translates to: GGGERVRAPHSAQGSWMAFQVPS*PVKQPV
Trigger: TACCGGCTGCTTCACGGGGCAGGAGGGCACCTGGAA...CGCCATCCAAGAGCCCTGCGCAGAGTGCGGCGCCCGGACACGCTCTCCCCCGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378543.2
ENST00000378546.9
ENST00000440825.6
CDS-3UTR GCA 90 bp GAGCGTGTCCGGGCGCCGCACTCTGCGCAGGGCTCTTGGATGGCGCTCACCACGTCCACAGACGGCTGCTaGTCCACCCTGGGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: ERVRAPHSAQGSWMALTTSTDGC*STLGAL
Trigger: CAGGGCCCCCAGGGTGGAGCAGCAGCCGTCTGTGGA...CGTGGTGAGCGCCATCCAAGAGCCCTGCGCAGAGTGCGGCGCCCGGACACGCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378543.2
ENST00000440825.6
CDS-3UTR GCA 90 bp GTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTCCCTCCACAGACGGCTaGTGCTCCACCCTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: VLEELAAVPASRRIRGDPPSTDG*CSTLGA
Trigger: GGCCCCCAGGGTGGAGCAGCAGCCGTCTGTGGAGGG...AGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000400918.7
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp TGGGGGCTGCACAGTGGGCCTGCGTGGGCGTGGTGCGGGGCAACTGCCCATGGAGCTCCGGGCTCACCGTaGGCAGTAGCTCGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: WGLHSGPAWAWCGATAHGAPGSP*AVARPR
Trigger: TCTGGGCCGAGCTACTGCGCACGGTGAGCCCGGAGC...TCCATGGGCAGTTGCCCCGCACCACGCCCACGCAGGCCCACTGTGCAGCCCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp GAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAGTTGGGGGCTGCACAGTaGGCCTGCGTGGGCGTGGTG +
Preference number: 4 (lower is better)
Translates to: EELAAVPASRRIRGDPAELGAAQ*ACVGVV
Trigger: CACCACGCCCACGCAGGCCCACTGTGCAGCCCCCAA...CTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp AACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAGGGGGTGGGAAGGCGGGCAGTaGAGGCACCTCGTGATCCAG +
Preference number: 4 (lower is better)
Translates to: NLLLCLRRGGSAGTLPRGWEGGQ*RHLVIQ
Trigger: CTGGATCACGAGGTGCCTTCACTGCCCGCCTTCCCA...CCCCCTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400918.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp GCGGCGGATCCGCGGGGACCCTGCCGAGGGGGCTGTCATGCGGTTTCCAAGGTGGGTGGGGGCGGGAGTTaGAGTACCTGGGGGCGAACT +
Preference number: 4 (lower is better)
Translates to: AADPRGPCRGGCHAVSKVGGGGS*STWGRT
Trigger: AGTTCGCCCCCAGGTACTTCAACTCCCGCCCCCACC...CACCTTGGAAACCGCATGACAGCCCCCTCGGCAGGGTCCCCGCGGATCCGCCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000400918.7
CDS-3UTR TCA 90 bp TGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAGGGGGCTGTCATGCCACCTCATGCCTCTaGGTGAGGCCTGGTGCACAG +
Preference number: 4 (lower is better)
Translates to: CCACVAADPRGPCRGGCHATSCL*VRPGAQ
Trigger: CTGTGCACCAGGCCTCACTCAGAGGCATGAGGTGGC...ATGACAGCCCCCTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp TGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAGGGGGCTGTCATTTCCAGGTGCCCTCCTaGCCCGTGAAGCAGCCGGTA +
Preference number: 4 (lower is better)
Translates to: CCACVAADPRGPCRGGCHFQVPS*PVKQPV
Trigger: TACCGGCTGCTTCACGGGGCAGGAGGGCACCTGGAA...ATGACAGCCCCCTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400918.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp CCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGCCCTCCACAGACGGCTaGTGCTCCACCCTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: PASCWRNLLLCLRRGGSAPSTDG*CSTLGA
Trigger: GGCCCCCAGGGTGGAGCAGCAGCCGTCTGTGGAGGG...CGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000400918.7
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp AGTCCCTCACACCTGGGCCCGGGCAGGCCAGCTTCGTGCTGGAGGAACTTGCTGGGCACATGGGGCAGCTaGGCAGGGCCGCGGCACCCT +
Preference number: 4 (lower is better)
Translates to: SPSHLGPGRPASCWRNLLGTWGS*AGPRHP
Trigger: AGGGTGCCGCGGCCCTGCGCAGCTGCCCCATGTGCC...CAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCCCGGGCCCAGGTGTGAGGGACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400918.7
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp GACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAGCAGCCAGGGACAGACGCTTaGGCCGAGACCGCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: DACAETAEGSVSGRCWEQPGTDA*AETAEG
Trigger: TCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCCCTGG...CTGCTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp GAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAGCGGTGTGAGGCCGCGTaGGTCTCTGTCGTGGACACG +
Preference number: 4 (lower is better)
Translates to: EELAAVPASRRIRGDPAERCEAA*VSVVDT
Trigger: CGTGTCCACGACAGAGACGCACGCGGCCTCACACCG...CTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp AACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAGGGGGCCAGCTGGGTCAGCCTaGCTCAGCCTCTCAAAGGGC +
Preference number: 4 (lower is better)
Translates to: NLLLCLRRGGSAGTLPRGPAGSA*LSLSKG
Trigger: GCCCTTTGAGAGGCTGAGGCAGGCTGACCCAGCTGG...CCCCCTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428120.5
CDS-3UTR CCA 90 bp CCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAGCAGAACAGTCCCTGGCAGGCCGGCACCTTaGGCAGCTGGTGACCCAGCC +
Preference number: 4 (lower is better)
Translates to: PRPQREASAGAAGSRTVPGRPAP*AAGDPA
Trigger: GGCTGGGTCACCAGCTGCCCAAGGTGCCGGCCTGCC...AGGGACTGTTCTGCTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp AGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCCTGGGTGCGGGTCCCTaGAGCACCCCTCGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: RPASCWRNLLLCLRRGGSLGAGP*STPRAA
Trigger: GGCTGCCCGAGGGGTGCTCCAGGGACCCGCACCCAG...GGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp CCTGGGCCCGGGCAGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTTGGGGGCTGCACAGTaGGCCTGCGTGGGCGTGGTG +
Preference number: 4 (lower is better)
Translates to: PGPGQASFVLEELAAVPALGAAQ*ACVGVV
Trigger: CACCACGCCCACGCAGGCCCACTGTGCAGCCCCCAA...CGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCCCGGGCCCAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp CTGCTGGCGGGGGAGAGCGTGTCCGGGCGCCGCACTCTGCGCAGGGCTCTTGGAAGTGAAGGCACCTCGTaGTCCAGGATCAGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: LLAGESVSGRRTLRRALGSEGTS*SRISSG
Trigger: CCCGGAGCTGATCCTGGATCACGAGGTGCCTTCACT...TCCAAGAGCCCTGCGCAGAGTGCGGCGCCCGGACACGCTCTCCCCCGCCAGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378546.9
CDS-3UTR TCA 90 bp GCGGCGGATCCGCGGGGACCCTGCCGAGGGGGCTGTCATGCGGTTTCCAAGGTGGCTCCGCCAGGAAAGTaGGCGTGTAGCGTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: AADPRGPCRGGCHAVSKVAPPGK*ACSVLR
Trigger: CCTCAGGACGCTACACGCTCACTTTCCTGGCGGAGC...CACCTTGGAAACCGCATGACAGCCCCCTCGGCAGGGTCCCCGCGGATCCGCCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400918.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp GGCCCGGGCAGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCACCGAGGAGTCGGTGTaGGGCCGCGTGCGTCTCTGT +
Preference number: 4 (lower is better)
Translates to: GPGRPASCWRNLLLCLRRTEESV*GRVRLC
Trigger: ACAGAGACGCACGCGGCCTCACACCGACTCCTCGGT...GCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCCCGGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp ACCTGGGCCCGGGCAGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCTCCACAGACGGCTGCTaGTCCACCCTGGGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: TWARAGQLRAGGTCCCACSTDGC*STLGAL
Trigger: CAGGGCCCCCAGGGTGGAGCAGCAGCCGTCTGTGGA...GCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCCCGGGCCCAGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000400918.7
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp AGCCTGCCCATGCGGTGGCCACAGCCTCGGGTGAGTTCCGGTTCCAAAGTACCGGGCACATGGGGCAGCTaGGCAGGGCCGCGGCACCCT +
Preference number: 4 (lower is better)
Translates to: SLPMRWPQPRVSSGSKVPGTWGS*AGPRHP
Trigger: AGGGTGCCGCGGCCCTGCGCAGCTGCCCCATGTGCC...CGGTACTTTGGAACCGGAACTCACCCGAGGCTGTGGCCACCGCATGGGCAGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420515.1
CDS-3UTR GCA 90 bp GCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAGGGGGCTGTCGGAAACAGAACTCGATaGACTGACCTGCTCCGCCAG +
Preference number: 4 (lower is better)
Translates to: AAVPASRRIRGDPAEGAVGNRTR*TDLLRQ
Trigger: CTGGCGGAGCAGGTCAGTGCATCGAGTTCTGTTTCC...GACAGCCCCCTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400918.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp CTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAGGGGGCTCCGAGGGGGCTGTCATaGGGTTTCCAAGGTGCACAT +
Preference number: 4 (lower is better)
Translates to: LAAVPASRRIRGDPAEGAPRGLS*GFQGAH
Trigger: ATGTGCACCTTGGAAACCGCATGACAGCCCCCTCGG...AGCCCCCTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000400918.7
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp TGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGGCTGGAGGAACTTGCTaGTGTGCCTGCGTCGCGGCG +
Preference number: 4 (lower is better)
Translates to: CWRNLLLCLRRGGSAGTLAGGTC*CACVAA
Trigger: CGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGC...CAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400918.7
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp CCTGGGCCCGGGCAGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGGCTGGAGGAACTTGCTaGTGTGCCTGCGTCGCGGCG +
Preference number: 4 (lower is better)
Translates to: PGPGQASFVLEELAAVPAAGGTC*CACVAA
Trigger: CGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGC...CGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCCCGGGCCCAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400918.7
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp GCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAGCAGAACAGCGTCAGCGGGCGCTaGTGGGAGCAGAACAGTCCC +
Preference number: 4 (lower is better)
Translates to: ACAETAEGSVSGRCWEQNSVSGR*WEQNSP
Trigger: GGGACTGTTCTGCTCCCAGCAGCGCCCGCTGACGCT...GTTCTGCTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp GCGGATCCGCGGGGACCCTGCCGAGGGGGCTGTCATGCGGTTTCCAAGGTGCACCCAGGGACAGACGCTTaGGCCGAGACCGCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: ADPRGPCRGGCHAVSKVHPGTDA*AETAEG
Trigger: TCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCCCTGG...GTGCACCTTGGAAACCGCATGACAGCCCCCTCGGCAGGGTCCCCGCGGATCCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp GCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAGCAGAACCGGTGTGAGGCCGCGTaGGTCTCTGTCGTGGACACG +
Preference number: 4 (lower is better)
Translates to: ACAETAEGSVSGRCWEQNRCEAA*VSVVDT
Trigger: CGTGTCCACGACAGAGACGCACGCGGCCTCACACCG...GTTCTGCTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp GGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCCTGCGTGGGCGTGGTaGGGGGCAACTGCCCATGGA +
Preference number: 4 (lower is better)
Translates to: GQLRAGGTCCCACVAADPPAWAW*GATAHG
Trigger: TCCATGGGCAGTTGCCCCGCACCACGCCCACGCAGG...CGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp CAGGCCTCCATGACTCAGGGGCCGCTCCACCCCATTGTGCGGCTGGTGGCTAAAGCTGCACAGTGGGCCTaGGTGGGCGTGGTGCGGGGC +
Preference number: 4 (lower is better)
Translates to: QASMTQGPLHPIVRLVAKAAQWA*VGVVRG
Trigger: GCCCCGCACCACGCCCACGCAGGCCCACTGTGCAGC...TTTAGCCACCAGCCGCACAATGGGGTGGAGCGGCCCCTGAGTCATGGAGGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp GCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAGGGGGCTGTCATGCACAGGTGTGGAAATTaGCACGCAGCCCTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: AVPASRRIRGDPAEGAVMHRCGN*HAALLA
Trigger: GGCCAAGAGGGCTGCGTGGCAATTTCCACACCTGTG...CATGACAGCCCCCTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp GCTCCAGGCTCAGCAGGCGCCTGTGCGGGACAGGGCGACGGTTCAAGACCAAGTCCCCAGACCCGCCTCTaGCAGGGCTCCAGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: APGSAGACAGQGDGSRPSPQTRL*QGSRLS
Trigger: GCTGAGCCTGGAGCCCTGGCAGAGGCGGGTCTGGGG...ACTTGGTCTTGAACCGTCGCCCTGTCCCGCACAGGCGCCTGCTGAGCCTGGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420515.1
CDS-3UTR CCA 90 bp AGCGTGTCCGGGCGCCGCACTCTGCGCAGGGCTCTTGGATGGCGCTCACCACGTACTCCTTCTGGCACATaGGGCAGCTGCGCAGGGCCG +
Preference number: 4 (lower is better)
Translates to: SVSGRRTLRRALGWRSPRTPSGT*GSCAGP
Trigger: CGGCCCTGCGCAGCTGCCCCATGTGCCAGAAGGAGT...ACGTGGTGAGCGCCATCCAAGAGCCCTGCGCAGAGTGCGGCGCCCGGACACGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378543.2
ENST00000440825.6
CDS-3UTR CCA 90 bp CGGGCAGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGACTCCTTCTGGCACATaGGGCAGCTGCGCAGGGCCG +
Preference number: 4 (lower is better)
Translates to: RAGQLRAGGTCCCACVAATPSGT*GSCAGP
Trigger: CGGCCCTGCGCAGCTGCCCCATGTGCCAGAAGGAGT...CGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400918.7
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp AGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAGCAGGGGCGAACTCCTTCTaGCACATGGGGCAGCTGCGC +
Preference number: 4 (lower is better)
Translates to: RRLRRDRRGKRQRALLGAGANSF*HMGQLR
Trigger: GCGCAGCTGCCCCATGTGCCAGAAGGAGTTCGCCCC...TGCTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp CAGACAGGAGCCCGCCCTGCTTTAATGCGCATGCGGGGGAGCCGAGAGGCGGGGCCAGCTGGGTCAGCCTaGGGGCGAACTCCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: QTGARPALMRMRGSREAGPAGSA*GRTPSG
Trigger: GCCAGAAGGAGTTCGCCCCCAGGCTGACCCAGCTGG...CCCCGCCTCTCGGCTCCCCCGCATGCGCATTAAAGCAGGGCGGGCTCCTGTCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378543.2
ENST00000378546.9
CDS-3UTR CCA 90 bp GCTGGCGGGGGAGAGCGTGTCCGGGCGCCGCACTCTGCGCAGGGCTCTTGGATGCTGTCAACATCCAGCTaGGTCAGCCTGGGGGCGAAC +
Preference number: 4 (lower is better)
Translates to: AGGGERVRAPHSAQGSWMLSTSS*VSLGAN
Trigger: GTTCGCCCCCAGGCTGACCCAGCTGGATGTTGACAG...CATCCAAGAGCCCTGCGCAGAGTGCGGCGCCCGGACACGCTCTCCCCCGCCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000378543.2
ENST00000378546.9
CDS-3UTR CCA 90 bp GGGCTGCTGGCGGGGGAGAGCGTGTCCGGGCGCCGCACTCTGCGCAGGGCTCTTAAGCACTGGGCCAGGTaGCTGTCAACATCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GLLAGESVSGRRTLRRALKHWAR*LSTSSW
Trigger: CCAGCTGGATGTTGACAGCCACCTGGCCCAGTGCTT...AAGAGCCCTGCGCAGAGTGCGGCGCCCGGACACGCTCTCCCCCGCCAGCAGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378543.2
ENST00000378546.9
ENST00000440825.6
CDS-3UTR CCA 90 bp GGCTGCTGGCGGGGGAGAGCGTGTCCGGGCGCCGCACTCTGCGCAGGGCTCTTGCTTTCGGCCAAGCACTaGGCCAGGTGGCTGTCAACA +
Preference number: 4 (lower is better)
Translates to: GCWRGRACPGAALCAGLLLSAKH*ARWLST
Trigger: TGTTGACAGCCACCTGGCCCAGTGCTTGGCCGAAAG...CAAGAGCCCTGCGCAGAGTGCGGCGCCCGGACACGCTCTCCCCCGCCAGCAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378543.2
ENST00000378546.9
ENST00000440825.6
CDS-3UTR CCA 90 bp CTGGCGGGGGAGAGCGTGTCCGGGCGCCGCACTCTGCGCAGGGCTCTTGGATGGTCTGCGCAGGGCTCTTaGATGGCGCTCACCACGTCA +
Preference number: 4 (lower is better)
Translates to: LAGESVSGRRTLRRALGWSAQGS*MALTTS
Trigger: TGACGTGGTGAGCGCCATCCAAGAGCCCTGCGCAGA...CCATCCAAGAGCCCTGCGCAGAGTGCGGCGCCCGGACACGCTCTCCCCCGCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378543.2
ENST00000378546.9
ENST00000440825.6
CDS-3UTR CCA 90 bp CGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCGTCAGCGGGCGCTGCTaGGAGCAGAACAGTCCCTCA +
Preference number: 4 (lower is better)
Translates to: RAGGTCCCACVAADPRGPVSGRC*EQNSPS
Trigger: TGAGGGACTGTTCTGCTCCCAGCAGCGCCCGCTGAC...GGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp CTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAGGGGGCTCGTGCGTCTCTGTCGTaGACACGCGTGATTGACCCT +
Preference number: 4 (lower is better)
Translates to: LAAVPASRRIRGDPAEGARASLS*TRVIDP
Trigger: AGGGTCAATCACGCGTGTCCACGACAGAGACGCACG...AGCCCCCTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp AGTCCCTCACACCTGGGCCCGGGCAGGCCAGCTTCGTGCTGGAGGAACTTGCTGGGCAGGCCGGCACCTTaGGCAGCTGGTGACCCAGCC +
Preference number: 4 (lower is better)
Translates to: SPSHLGPGRPASCWRNLLGRPAP*AAGDPA
Trigger: GGCTGGGTCACCAGCTGCCCAAGGTGCCGGCCTGCC...CAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCCCGGGCCCAGGTGTGAGGGACT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp AGTCCCTCACACCTGGGCCCGGGCAGGCCAGCTTCGTGCTGGAGGAACTTGCTGGGGCCTGCGTGGGCGTaGTGCGGGGCAACTGCCCAT +
Preference number: 4 (lower is better)
Translates to: SPSHLGPGRPASCWRNLLGPAWA*CGATAH
Trigger: ATGGGCAGTTGCCCCGCACCACGCCCACGCAGGCCC...CAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCCCGGGCCCAGGTGTGAGGGACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp TCACACCTGGGCCCGGGCAGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCTCCACAGACGGCTGCTaGTCCACCCTGGGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: SHLGPGRPASCWRNLLLCSTDGC*STLGAL
Trigger: CAGGGCCCCCAGGGTGGAGCAGCAGCCGTCTGTGGA...GCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCCCGGGCCCAGGTGTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000400918.7
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp GGATCCGCGGGGACCCTGCCGAGGGGGCTGTCATGCGGTTTCCAAGGTGCACATTCCACAGACGGCTGCTaGTCCACCCTGGGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: GSAGTLPRGLSCGFQGAHSTDGC*STLGAL
Trigger: CAGGGCCCCCAGGGTGGAGCAGCAGCCGTCTGTGGA...ATGTGCACCTTGGAAACCGCATGACAGCCCCCTCGGCAGGGTCCCCGCGGATCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000400918.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp CAGAACAGTCCCTCACACCTGGGCCCGGGCAGGCCAGCTTCGTGCTGGAGGAACTCCACAGACGGCTGCTaGTCCACCCTGGGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: QNSPSHLGPGRPASCWRNSTDGC*STLGAL
Trigger: CAGGGCCCCCAGGGTGGAGCAGCAGCCGTCTGTGGA...GTTCCTCCAGCACGAAGCTGGCCTGCCCGGGCCCAGGTGTGAGGGACTGTTCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp AGCCTGCCCATGCGGTGGCCACAGCCTCGGGTGAGTTCCGGTTCCAAAGTACCGCCCTCCACAGACGGCTaGTGCTCCACCCTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: SLPMRWPQPRVSSGSKVPPSTDG*CSTLGA
Trigger: GGCCCCCAGGGTGGAGCAGCAGCCGTCTGTGGAGGG...CGGTACTTTGGAACCGGAACTCACCCGAGGCTGTGGCCACCGCATGGGCAGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420515.1
CDS-3UTR GCA 90 bp ATCCGCGGGGACCCTGCCGAGGGGGCTGTCATGCGGTTTCCAAGGTGCACATTTGGCACATGGGGCAGCTaGGCAGGGCCGCGGCACCCT +
Preference number: 4 (lower is better)
Translates to: IRGDPAEGAVMRFPRCTFGTWGS*AGPRHP
Trigger: AGGGTGCCGCGGCCCTGCGCAGCTGCCCCATGTGCC...AAATGTGCACCTTGGAAACCGCATGACAGCCCCCTCGGCAGGGTCCCCGCGGAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000400918.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp TGCGCAGGGCTCTTGGATGGCGCTCACCACGTCACGTCTTCTGTGCTTTCGGCCGGCACATGGGGCAGCTaGGCAGGGCCGCGGCACCCT +
Preference number: 4 (lower is better)
Translates to: CAGLLDGAHHVTSSVLSAGTWGS*AGPRHP
Trigger: AGGGTGCCGCGGCCCTGCGCAGCTGCCCCATGTGCC...GGCCGAAAGCACAGAAGACGTGACGTGGTGAGCGCCATCCAAGAGCCCTGCGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378543.2
ENST00000440825.6
CDS-3UTR GCA 90 bp GGGCTGCTGGCGGGGGAGAGCGTGTCCGGGCGCCGCACTCTGCGCAGGGCTCTTACGTCACGTCTTCTGTaGTTTCGGCCAAGCACTGGG +
Preference number: 4 (lower is better)
Translates to: GLLAGESVSGRRTLRRALTSRLL*FRPSTG
Trigger: CCCAGTGCTTGGCCGAAAGCACAGAAGACGTGACGT...AAGAGCCCTGCGCAGAGTGCGGCGCCCGGACACGCTCTCCCCCGCCAGCAGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378543.2
ENST00000378546.9
ENST00000440825.6
CDS-3UTR GCA 90 bp GAGACAGACAGGAGCCCGCCCTGCTTTAATGCGCATGCGGGGGAGCCGAGAGGCGCTCCGGGCTCACCGTaGGCAGTAGCTCGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: ETDRSPPCFNAHAGEPRGAPGSP*AVARPR
Trigger: TCTGGGCCGAGCTACTGCGCACGGTGAGCCCGGAGC...GCCTCTCGGCTCCCCCGCATGCGCATTAAAGCAGGGCGGGCTCCTGTCTGTCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378546.9
CDS-3UTR GCA 90 bp GCGGCGGATCCGCGGGGACCCTGCCGAGGGGGCTGTCATGCGGTTTCCAAGGTGTCCGTGAGTGGCGCCTaGCCCACATCTCAGACGCAA +
Preference number: 4 (lower is better)
Translates to: AADPRGPCRGGCHAVSKVSVSGA*PTSQTQ
Trigger: TTGCGTCTGAGATGTGGGGCAGGCGCCACTCACGGA...CACCTTGGAAACCGCATGACAGCCCCCTCGGCAGGGTCCCCGCGGATCCGCCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400918.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp TGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAGGGGGCTGTCATCTCGATGCACTGACCTaGTCCGCCAGGAAAGTGAGC +
Preference number: 4 (lower is better)
Translates to: CCACVAADPRGPCRGGCHLDALT*SARKVS
Trigger: GCTCACTTTCCTGGCGGAGCAGGTCAGTGCATCGAG...ATGACAGCCCCCTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400918.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp CGGGCAGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGCGTGCTGGAGGAACTTaGTGCTGTGCCTGCGTCGCG +
Preference number: 4 (lower is better)
Translates to: RAGQLRAGGTCCCACVAARAGGT*CCACVA
Trigger: CGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACG...CGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400918.7
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp GGATCCGCGGGGACCCTGCCGAGGGGGCTGTCATGCGGTTTCCAAGGTGCACATCCTGCGTGGGCGTGGTaGGGGGCAACTGCCCATGGA +
Preference number: 4 (lower is better)
Translates to: GSAGTLPRGLSCGFQGAHPAWAW*GATAHG
Trigger: TCCATGGGCAGTTGCCCCGCACCACGCCCACGCAGG...ATGTGCACCTTGGAAACCGCATGACAGCCCCCTCGGCAGGGTCCCCGCGGATCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp CTTGAGTCCCACCCGCCTGGTGTCATCTCTCCAGTGGGCGTTGGGGGAGGATTCGCTGCACAGTGGGCCTaGGTGGGCGTGGTGCGGGGC +
Preference number: 4 (lower is better)
Translates to: LESHPPGVISPVGVGGGFAAQWA*VGVVRG
Trigger: GCCCCGCACCACGCCCACGCAGGCCCACTGTGCAGC...GAATCCTCCCCCAACGCCCACTGGAGAGATGACACCAGGCGGGTGGGACTCAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp TGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAGGGGGCTGTCATGTGTTGCCAGTAGCGTaGCGGTTACCAGTTTGGCCG +
Preference number: 4 (lower is better)
Translates to: CCACVAADPRGPCRGGCHVLPVA*RLPVWP
Trigger: CGGCCAAACTGGTAACCGGCACGCTACTGGCAACAC...ATGACAGCCCCCTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp GCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGCGAACTCCTTCTaGCACATGGGGCAGCTGCGC +
Preference number: 4 (lower is better)
Translates to: ASFVLEELAAVPASRRIRGANSF*HMGQLR
Trigger: GCGCAGCTGCCCCATGTGCCAGAAGGAGTTCGCCCC...GCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400918.7
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp GGGCCCGGGCAGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCCAGCGGGACACAGGTaGGGGCGGGAGTTGAAGTAC +
Preference number: 4 (lower is better)
Translates to: GPGQASFVLEELAAVPASPAGHR*GRELKY
Trigger: GTACTTCAACTCCCGCCCCCACCTGTGTCCCGCTGG...CGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCCCGGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400918.7
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp TGGGGGCTGCACAGTGGGCCTGCGTGGGCGTGGTGCGGGGCAACTGCCCATGGAATGAGTGAGTCCCACTaGGTGCGGGTCCCTGGAGCA +
Preference number: 4 (lower is better)
Translates to: WGLHSGPAWAWCGATAHGMSESH*VRVPGA
Trigger: TGCTCCAGGGACCCGCACCCAGTGGGACTCACTCAT...TCCATGGGCAGTTGCCCCGCACCACGCCCACGCAGGCCCACTGTGCAGCCCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp GCGTGTCCGGGCGCCGCACTCTGCGCAGGGCTCTTGGATGGCGCTCACCACGTCTCTTGGGTCCGACAGTaGAGACTTCAGTGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: ACPGAALCAGLLDGAHHVSWVRQ*RLQWAP
Trigger: CGGAGCCCACTGAAGTCTTCACTGTCGGACCCAAGA...GACGTGGTGAGCGCCATCCAAGAGCCCTGCGCAGAGTGCGGCGCCCGGACACGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378543.2
ENST00000440825.6
CDS-3UTR TCA 90 bp GACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAGCAGAACAGTCCCTCACAACCGAGGAGTCGGTGTaGGGCCGCGTGCGTCTCTGT +
Preference number: 4 (lower is better)
Translates to: DRRGKRQRALLGAEQSLTTEESV*GRVRLC
Trigger: ACAGAGACGCACGCGGCCTCACACCGACTCCTCGGT...TGTGAGGGACTGTTCTGCTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp AGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGACCTTGGGCAGCTGGTaGCCCAGCCTGCCCTTGAGT +
Preference number: 4 (lower is better)
Translates to: SFVLEELAAVPASRRIRGTLGSW*PSLPLS
Trigger: ACTCAAGGGCAGGCTGGGTCACCAGCTGCCCAAGGT...CCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp CTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAGGGGGCTGTCACGGTCTGGACAACTTTaGCACACAGTTCACCAGCGA +
Preference number: 4 (lower is better)
Translates to: LLCLRRGGSAGTLPRGLSRSGQL*HTVHQR
Trigger: TCGCTGGTGAACTGTGTGTCAAAGTTGTCCAGACCG...TGACAGCCCCCTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp GCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAGCAGAACACAGCTGTCCAGAGCTaGGGCTTCCTAGAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: ACAETAEGSVSGRCWEQNTAVQS*GFLEAG
Trigger: CCCTGCCTCTAGGAAGCCTCAGCTCTGGACAGCTGT...GTTCTGCTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp GCACTCTGCGCAGGGCTCTTGGATGGCGCTCACCACGTCACGTCTTCTGTGCTTGGCACATGGGGCAGCTaGGCAGGGCCGCGGCACCCT +
Preference number: 4 (lower is better)
Translates to: ALCAGLLDGAHHVTSSVLGTWGS*AGPRHP
Trigger: AGGGTGCCGCGGCCCTGCGCAGCTGCCCCATGTGCC...AAGCACAGAAGACGTGACGTGGTGAGCGCCATCCAAGAGCCCTGCGCAGAGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378543.2
ENST00000440825.6
CDS-3UTR GCA 90 bp CAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGAGGAACTTGCTGCTGTaGCTGCGTCGCGGCGGATCC +
Preference number: 4 (lower is better)
Translates to: QLRAGGTCCCACVAADPRRNLLL*LRRGGS
Trigger: GGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCT...CCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400918.7
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp GTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGGCAGGCCAGCTTCGTaGTGGAGGAACTTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: VLEELAAVPASRRIRGDPGRPAS*WRNLLL
Trigger: CAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCC...AGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400918.7
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp CAGAACAGTCCCTCACACCTGGGCCCGGGCAGGCCAGCTTCGTGCTGGAGGAACCGGTGTGAGGCCGCGTaGGTCTCTGTCGTGGACACG +
Preference number: 4 (lower is better)
Translates to: QNSPSHLGPGRPASCWRNRCEAA*VSVVDT
Trigger: CGTGTCCACGACAGAGACGCACGCGGCCTCACACCG...GTTCCTCCAGCACGAAGCTGGCCTGCCCGGGCCCAGGTGTGAGGGACTGTTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp CTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAGGGGGCTGTCATTCCCGAGCTGTTTTTaGTTCTGGGGGCGAACTCCT +
Preference number: 4 (lower is better)
Translates to: LLCLRRGGSAGTLPRGLSFPSCF*FWGRTP
Trigger: AGGAGTTCGCCCCCAGAAGCAAAAACAGCTCGGGAA...TGACAGCCCCCTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000428120.5
CDS-3UTR GCA 90 bp GAGGCGGGGCTGCTGGCGGGGGAGAGCGTGTCCGGGCGCCGCACTCTGCGCAGGGCTGGAGTGCAGTGGTaGAATCATACTTCACTACAG +
Preference number: 4 (lower is better)
Translates to: EAGLLAGESVSGRRTLRRAGVQW*NHTSLQ
Trigger: CTGTAGTGAAGTATGATTGCACCACTGCACTCCAGC...CCTGCGCAGAGTGCGGCGCCCGGACACGCTCTCCCCCGCCAGCAGCCCCGCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440825.6
CDS-3UTR GCA 90 bp AGCCTGCCCATGCGGTGGCCACAGCCTCGGGTGAGTTCCGGTTCCAAAGTACCGCTCAGCAGGCGCCTGTaGGGGACAGGGCGACGGTTC +
Preference number: 4 (lower is better)
Translates to: SLPMRWPQPRVSSGSKVPLSRRL*GTGRRF
Trigger: GAACCGTCGCCCTGTCCCGCACAGGCGCCTGCTGAG...CGGTACTTTGGAACCGGAACTCACCCGAGGCTGTGGCCACCGCATGGGCAGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420515.1
CDS-3UTR CCA 90 bp GCGCCGCACTCTGCGCAGGGCTCTTGGATGGCGCTCACCACGTCACGTCTTCTGCCAGCTGGGTCAGCCTaGGGGCGAACTCCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: APHSAQGSWMALTTSRLLPAGSA*GRTPSG
Trigger: GCCAGAAGGAGTTCGCCCCCAGGCTGACCCAGCTGG...CAGAAGACGTGACGTGGTGAGCGCCATCCAAGAGCCCTGCGCAGAGTGCGGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378543.2
CDS-3UTR CCA 90 bp CGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCCTTTCGGCCAAGCACTaGGCCAGGTGGCTGTCAACA +
Preference number: 4 (lower is better)
Translates to: RAGGTCCCACVAADPRGPLSAKH*ARWLST
Trigger: TGTTGACAGCCACCTGGCCCAGTGCTTGGCCGAAAG...GGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp GGCTGCACAGTGGGCCTGCGTGGGCGTGGTGCGGGGCAACTGCCCATGGAGCCCCTCTCCAGTGGGCGTTaGGGGAGGATTCTTATGCGA +
Preference number: 4 (lower is better)
Translates to: GCTVGLRGRGAGQLPMEPLSSGR*GRILMR
Trigger: TCGCATAAGAATCCTCCCCCAACGCCCACTGGAGAG...GGGCTCCATGGGCAGTTGCCCCGCACCACGCCCACGCAGGCCCACTGTGCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp CAGTGGGCGTTGGGGGAGGATTCTTATGCGAACGTGACTCCGCTTCCCCCAAGGCCTCGGGCAGCCCCATaGCAGGCCGGCACCTTGGGC +
Preference number: 4 (lower is better)
Translates to: QWALGEDSYANVTPLPPRPRAAP*QAGTLG
Trigger: GCCCAAGGTGCCGGCCTGCCATGGGGCTGCCCGAGG...CCTTGGGGGAAGCGGAGTCACGTTCGCATAAGAATCCTCCCCCAACGCCCACTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp TGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAGGGGGCTGTCATAAAACTCTGGTGACTTaGGGGCTGCACAGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: CCACVAADPRGPCRGGCHKTLVT*GLHSGP
Trigger: AGGCCCACTGTGCAGCCCCCAAGTCACCAGAGTTTT...ATGACAGCCCCCTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp CTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAGGGGGCTCCTCTGAGTGAGGCCTaGTGCACAGGTGTGGAAATT +
Preference number: 4 (lower is better)
Translates to: LAAVPASRRIRGDPAEGAPLSEA*CTGVEI
Trigger: AATTTCCACACCTGTGCACCAGGCCTCACTCAGAGG...AGCCCCCTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp CTGGCGGGGGAGAGCGTGTCCGGGCGCCGCACTCTGCGCAGGGCTCTTGGATGGCTGTCAACATCCAGCTaGGTCAGCTCTGTCACCCAG +
Preference number: 4 (lower is better)
Translates to: LAGESVSGRRTLRRALGWLSTSS*VSSVTQ
Trigger: CTGGGTGACAGAGCTGACCCAGCTGGATGTTGACAG...CCATCCAAGAGCCCTGCGCAGAGTGCGGCGCCCGGACACGCTCTCCCCCGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440825.6
CDS-3UTR TCA 90 bp TCACACCTGGGCCCGGGCAGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCTGGGAAGGCGGGCAGTaGAGGCACCTCGTGATCCAG +
Preference number: 4 (lower is better)
Translates to: SHLGPGRPASCWRNLLLCWEGGQ*RHLVIQ
Trigger: CTGGATCACGAGGTGCCTTCACTGCCCGCCTTCCCA...GCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCCCGGGCCCAGGTGTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400918.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp CAGAACAGTCCCTCACACCTGGGCCCGGGCAGGCCAGCTTCGTGCTGGAGGAACGCTCCGCCAGGAAAGTaGGCGTGTAGCGTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: QNSPSHLGPGRPASCWRNAPPGK*ACSVLR
Trigger: CCTCAGGACGCTACACGCTCACTTTCCTGGCGGAGC...GTTCCTCCAGCACGAAGCTGGCCTGCCCGGGCCCAGGTGTGAGGGACTGTTCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp AGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCACCTTGGGCAGCTGGTaGCCCAGCCTGCCCTTGAGT +
Preference number: 4 (lower is better)
Translates to: RPASCWRNLLLCLRRGGSTLGSW*PSLPLS
Trigger: ACTCAAGGGCAGGCTGGGTCACCAGCTGCCCAAGGT...GGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp AGTCCCTCACACCTGGGCCCGGGCAGGCCAGCTTCGTGCTGGAGGAACTTGCTGGCTGACCCCAGACGATaGGTGAGTCCCACTGGGTGC +
Preference number: 4 (lower is better)
Translates to: SPSHLGPGRPASCWRNLLADPRR*VSPTGC
Trigger: GCACCCAGTGGGACTCACTCATCGTCTGGGGTCAGC...CAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCCCGGGCCCAGGTGTGAGGGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp CTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAGGGGGCTGATGACACTCACCCTTaGCTGCCAGGGTCATTCAAA +
Preference number: 4 (lower is better)
Translates to: LAAVPASRRIRGDPAEGADDTHP*LPGSFK
Trigger: TTTGAATGACCCTGGCAGTCAAGGGTGAGTGTCATC...AGCCCCCTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp GTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGAAGTACCCCTCAGGTaGAGGCACAGCTGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: VLEELAAVPASRRIRGDPEVPLR*RHSCPE
Trigger: CTCTGGACAGCTGTGCCTTCACCTGAGGGGTACTTC...AGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp GGCGCCGCACTCTGCGCAGGGCTCTTGGATGGCGCTCACCACGTCACGTCTTCTGACAGGAGCCCGCCCTaGTTTAATGCGCATGCGGGG +
Preference number: 4 (lower is better)
Translates to: GAALCAGLLDGAHHVTSSDRSPP*FNAHAG
Trigger: CCCCGCATGCGCATTAAAGCAGGGCGGGCTCCTGTC...AGAAGACGTGACGTGGTGAGCGCCATCCAAGAGCCCTGCGCAGAGTGCGGCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378543.2
CDS-3UTR GCA 90 bp CGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCGGAAACAGAACTCGATaGACTGACCTGCTCCGCCAG +
Preference number: 4 (lower is better)
Translates to: RAGGTCCCACVAADPRGPGNRTR*TDLLRQ
Trigger: CTGGCGGAGCAGGTCAGTGCATCGAGTTCTGTTTCC...GGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400918.7
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp ATTGCTGTCCACCGAGGAGTCGGTGTGAGGCCGCGTGCGTCTCTGTCGTGGACAACTTGCTGCTGTGCCTaGGTCGCGGCGGATCCGCGG +
Preference number: 4 (lower is better)
Translates to: IAVHRGVGVRPRASLSWTTCCCA*VAADPR
Trigger: CCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGT...TGTCCACGACAGAGACGCACGCGGCCTCACACCGACTCCTCGGTGGACAGCAAT
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp AGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAGCAGAACAGTCCCTCACCGTGCTGGAGGAACTTaGTGCTGTGCCTGCGTCGCG +
Preference number: 4 (lower is better)
Translates to: RPQREASAGAAGSRTVPHRAGGT*CCACVA
Trigger: CGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACG...GTGAGGGACTGTTCTGCTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp CTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAGGGGGCTCTTTGCCCACAGGGATaGCATAAAGAGGATCGACCA +
Preference number: 4 (lower is better)
Translates to: LAAVPASRRIRGDPAEGALCPQG*HKEDRP
Trigger: TGGTCGATCCTCTTTATGGCATCCCTGTGGGCAAAG...AGCCCCCTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp CGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCGGGGGAGGATTCTTATaGGAACGTGACTCCGCTTCC +
Preference number: 4 (lower is better)
Translates to: RAGGTCCCACVAADPRGPGGGFL*ERDSAS
Trigger: GGAAGCGGAGTCACGTTCGCATAAGAATCCTCCCCC...GGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp ATTGCTGTCCACCGAGGAGTCGGTGTGAGGCCGCGTGCGTCTCTGTCGTGGACAGTGGTGCGGGGCAACTaGCCATGGAGCCCGTGGCTG +
Preference number: 4 (lower is better)
Translates to: IAVHRGVGVRPRASLSWTVVRGN*PWSPWL
Trigger: CAGCCACGGGCTCCATGGGCAGTTGCCCCGCACCAC...TGTCCACGACAGAGACGCACGCGGCCTCACACCGACTCCTCGGTGGACAGCAAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp GGGCGCCGCACTCTGCGCAGGGCTCTTGGATGGCGCTCACCACGTCACGTCTTCCTCCAGCAACCCACCTaGCTCAGCCTCTCAAAGGGC +
Preference number: 4 (lower is better)
Translates to: GRRTLRRALGWRSPRHVFLQQPT*LSLSKG
Trigger: GCCCTTTGAGAGGCTGAGGCAGGTGGGTTGCTGGAG...GAAGACGTGACGTGGTGAGCGCCATCCAAGAGCCCTGCGCAGAGTGCGGCGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440825.6
CDS-3UTR CCA 90 bp AGCCTGCCCATGCGGTGGCCACAGCCTCGGGTGAGTTCCGGTTCCAAAGTACCGGGGGCGAACTCCTTCTaGCACATGGGGCAGCTGCGC +
Preference number: 4 (lower is better)
Translates to: SLPMRWPQPRVSSGSKVPGANSF*HMGQLR
Trigger: GCGCAGCTGCCCCATGTGCCAGAAGGAGTTCGCCCC...CGGTACTTTGGAACCGGAACTCACCCGAGGCTGTGGCCACCGCATGGGCAGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420515.1
CDS-3UTR CCA 90 bp CGTGTCCGGGCGCCGCACTCTGCGCAGGGCTCTTGGATGGCGCTCACCACGTCACTTTCGGCCAAGCACTaGGCCAGGTGGCTGTCAACA +
Preference number: 4 (lower is better)
Translates to: RVRAPHSAQGSWMALTTSLSAKH*ARWLST
Trigger: TGTTGACAGCCACCTGGCCCAGTGCTTGGCCGAAAG...TGACGTGGTGAGCGCCATCCAAGAGCCCTGCGCAGAGTGCGGCGCCCGGACACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378543.2
ENST00000440825.6
CDS-3UTR CCA 90 bp GGGACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGTGTCATCTCTCCAGTaGGCGTTGGGGGAGGATTCT +
Preference number: 4 (lower is better)
Translates to: GTDACAETAEGSVSGRCWVSSLQ*ALGEDS
Trigger: AGAATCCTCCCCCAACGCCCACTGGAGAGATGACAC...CCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp TCAACCCATTATTGCTGTCCACCGAGGAGTCGGTGTGAGGCCGCGTGCGTCTCTCTGGGTGCGGGTCCCTaGAGCACCCCTCGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: STHYCCPPRSRCEAACVSLGAGP*STPRAA
Trigger: GGCTGCCCGAGGGGTGCTCCAGGGACCCGCACCCAG...AGAGACGCACGCGGCCTCACACCGACTCCTCGGTGGACAGCAATAATGGGTTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp GCGGCGGATCCGCGGGGACCCTGCCGAGGGGGCTGTCATGCGGTTTCCAAGGTGACCCCATTGTGCGGCTaGTGGCTAAATACTGCCGTG +
Preference number: 4 (lower is better)
Translates to: AADPRGPCRGGCHAVSKVTPLCG*WLNTAV
Trigger: CACGGCAGTATTTAGCCACCAGCCGCACAATGGGGT...CACCTTGGAAACCGCATGACAGCCCCCTCGGCAGGGTCCCCGCGGATCCGCCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp TTGGGGGCTGCACAGTGGGCCTGCGTGGGCGTGGTGCGGGGCAACTGCCCATGGGTTGGCTGCCAACTTTaGACTCCGGTGCCTTCGCAT +
Preference number: 4 (lower is better)
Translates to: LGAAQWACVGVVRGNCPWVGCQL*TPVPSH
Trigger: ATGCGAAGGCACCGGAGTCCAAAGTTGGCAGCCAAC...CCATGGGCAGTTGCCCCGCACCACGCCCACGCAGGCCCACTGTGCAGCCCCCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428120.5
3UTR CAA 72 bp AGAGCGTGTCCGGGCGCCGCACTCTGCGCAGGGCTCTaGGATGGCGCTCACCACGTCACGTCTTCTGTGCTT +
Preference number: 4 (lower is better)
Translates to: RACPGAALCAGL*DGAHHVTSSVL
Trigger: AAGCACAGAAGACGTGACGTGGTGAGCGCCATCCAAGAGCCCTGCGCAGAGTGCGGCGCCCGGACACGCTCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378543.2
ENST00000440825.6
CDS-3UTR TCA 90 bp AGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGTCTTGGGTCCGACAGTaGAGACTTCAGTGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: SFVLEELAAVPASRRIRGSWVRQ*RLQWAP
Trigger: CGGAGCCCACTGAAGTCTTCACTGTCGGACCCAAGA...CCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400918.7
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp CAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGTCTTGGGTCCGACAGTaGAGACTTCAGTGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: QLRAGGTCCCACVAADPRSWVRQ*RLQWAP
Trigger: CGGAGCCCACTGAAGTCTTCACTGTCGGACCCAAGA...CCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400918.7
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp GCTGTGAGAAATGGGAGGCCTCCTGGCAGCTCCACTCCCCAGACCCGCCTCTGCAGTGAAGGCACCTCGTaGTCCAGGATCAGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: AVRNGRPPGSSTPQTRLCSEGTS*SRISSG
Trigger: CCCGGAGCTGATCCTGGATCACGAGGTGCCTTCACT...GCAGAGGCGGGTCTGGGGAGTGGAGCTGCCAGGAGGCCTCCCATTTCTCACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420515.1
CDS-3UTR TCA 90 bp AGCCTGCCCATGCGGTGGCCACAGCCTCGGGTGAGTTCCGGTTCCAAAGTACCGTGGGAAGGCGGGCAGTaGAGGCACCTCGTGATCCAG +
Preference number: 4 (lower is better)
Translates to: SLPMRWPQPRVSSGSKVPWEGGQ*RHLVIQ
Trigger: CTGGATCACGAGGTGCCTTCACTGCCCGCCTTCCCA...CGGTACTTTGGAACCGGAACTCACCCGAGGCTGTGGCCACCGCATGGGCAGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420515.1
CDS-3UTR TCA 90 bp GCTGGGAGCAGAACAGTCCCTCACACCTGGGCCCGGGCAGGCCAGCTTCGTGCTCAGAACTCGATGCACTaGCCTGCTCCGCCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: AGSRTVPHTWARAGQLRAQNSMH*PAPPGK
Trigger: CTTTCCTGGCGGAGCAGGTCAGTGCATCGAGTTCTG...AGCACGAAGCTGGCCTGCCCGGGCCCAGGTGTGAGGGACTGTTCTGCTCCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp GTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTATTCTTATGCGAACGTaGCTCCGCTTCCCCCAAGGG +
Preference number: 4 (lower is better)
Translates to: VLEELAAVPASRRIRGDPILMRT*LRFPQG
Trigger: CCCTTGGGGGAAGCGGAGTCACGTTCGCATAAGAAT...AGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp CAGAACAGTCCCTCACACCTGGGCCCGGGCAGGCCAGCTTCGTGCTGGAGGAACCGGCTCTCCTGTGGATaGCACTCACCCTTGACTGCC +
Preference number: 4 (lower is better)
Translates to: QNSPSHLGPGRPASCWRNRLSCG*HSPLTA
Trigger: GGCAGTCAAGGGTGAGTGTCATCCACAGGAGAGCCG...GTTCCTCCAGCACGAAGCTGGCCTGCCCGGGCCCAGGTGTGAGGGACTGTTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp GGATCCGCGGGGACCCTGCCGAGGGGGCTGTCATGCGGTTTCCAAGGTGCACATCCTCATGCCTCTGAGTaGGGCCTGGTGCACAGGTGT +
Preference number: 4 (lower is better)
Translates to: GSAGTLPRGLSCGFQGAHPHASE*GLVHRC
Trigger: ACACCTGTGCACCAGGCCTCACTCAGAGGCATGAGG...ATGTGCACCTTGGAAACCGCATGACAGCCCCCTCGGCAGGGTCCCCGCGGATCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp CAGGCACGCGCCACCACGCCCAGGCATGTAAAGATGGGATCTTGCCATGTTGCCTCCACAGACGGCTGCTaGTCCACCCTGGGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: QARATTPRHVKMGSCHVASTDGC*STLGAL
Trigger: CAGGGCCCCCAGGGTGGAGCAGCAGCCGTCTGTGGA...GGCAACATGGCAAGATCCCATCTTTACATGCCTGGGCGTGGTGGCGCGTGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420515.1
ENST00000440825.6
CDS-3UTR GCA 90 bp CGTCACGTCTTCTGTGCTTTCGGCCAAGCACTGGGCCAGGTGGCTGTCAACATCCCCTCCACAGACGGCTaGTGCTCCACCCTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: RHVFCAFGQALGQVAVNIPSTDG*CSTLGA
Trigger: GGCCCCCAGGGTGGAGCAGCAGCCGTCTGTGGAGGG...GATGTTGACAGCCACCTGGCCCAGTGCTTGGCCGAAAGCACAGAAGACGTGACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378543.2
ENST00000428120.5
ENST00000440825.6
CDS-3UTR GCA 90 bp AACAGAACTCGATGCACTGACCTGCTCCGCCAGGAAAGTGAGCGTGTAGCGTCCGGCACATGGGGCAGCTaGGCAGGGCCGCGGCACCCT +
Preference number: 4 (lower is better)
Translates to: NRTRCTDLLRQESERVASGTWGS*AGPRHP
Trigger: AGGGTGCCGCGGCCCTGCGCAGCTGCCCCATGTGCC...GGACGCTACACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCATCGAGTTCTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400918.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp GGCACGCGCCACCACGCCCAGGCATGTAAAGATGGGATCTTGCCATGTTGCCCAGCTCCGGGCTCACCGTaGGCAGTAGCTCGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: GTRHHAQACKDGILPCCPAPGSP*AVARPR
Trigger: TCTGGGCCGAGCTACTGCGCACGGTGAGCCCGGAGC...TGGGCAACATGGCAAGATCCCATCTTTACATGCCTGGGCGTGGTGGCGCGTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420515.1
CDS-3UTR GCA 90 bp GGGCCCGGGCAGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGGGAAACAGAACTCGATaGACTGACCTGCTCCGCCAG +
Preference number: 4 (lower is better)
Translates to: GPGQASFVLEELAAVPASGNRTR*TDLLRQ
Trigger: CTGGCGGAGCAGGTCAGTGCATCGAGTTCTGTTTCC...CGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCCCGGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400918.7
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp TGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAGCAGAACAGTCCGAGGGGGCTGTCATaGGGTTTCCAAGGTGCACAT +
Preference number: 4 (lower is better)
Translates to: CAETAEGSVSGRCWEQNSPRGLS*GFQGAH
Trigger: ATGTGCACCTTGGAAACCGCATGACAGCCCCCTCGG...ACTGTTCTGCTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp AGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGGCAGGCCAGCTTCGTaGTGGAGGAACTTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: RPASCWRNLLLCLRRGGSGRPAS*WRNLLL
Trigger: CAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCC...GGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400918.7
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp CTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAGGGGGCTGTCATGCATATCAACCCATTATTaGTGTCCACCGAGGAGTCGG +
Preference number: 4 (lower is better)
Translates to: LCLRRGGSAGTLPRGLSCISTHY*CPPRSR
Trigger: CCGACTCCTCGGTGGACAGCAATAATGGGTTGATAT...GCATGACAGCCCCCTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp GGGCCCGGGCAGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGCTCCACCCCATTGTaGGGCTGGTGGCTAAATACT +
Preference number: 4 (lower is better)
Translates to: GPGQASFVLEELAAVPASRSTPL*GWWLNT
Trigger: AGTATTTAGCCACCAGCCGCACAATGGGGTGGAGCG...CGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCCCGGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp GTCCGGGCGCCGCACTCTGCGCAGGGCTCTTGGATGGCGCTCACCACGTCACGTAACTTTGGACTCCGGTaGCTTCGCATTCCCGAGCTG +
Preference number: 4 (lower is better)
Translates to: VRAPHSAQGSWMALTTSRNFGLR*LRIPEL
Trigger: CAGCTCGGGAATGCGAAGGCACCGGAGTCCAAAGTT...ACGTGACGTGGTGAGCGCCATCCAAGAGCCCTGCGCAGAGTGCGGCGCCCGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440825.6
CDS-3UTR GCA 90 bp CAGGCACGCGCCACCACGCCCAGGCATGTAAAGATGGGATCTTGCCATGTTGCCCAGCTAGCCTGCCCATaGGGTGGCCACAGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: QARATTPRHVKMGSCHVAQLACP*GGHSLG
Trigger: CCCGAGGCTGTGGCCACCGCATGGGCAGGCTAGCTG...GGCAACATGGCAAGATCCCATCTTTACATGCCTGGGCGTGGTGGCGCGTGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420515.1
CDS-3UTR CCA 90 bp TCCGCGGGGACCCTGCCGAGGGGGCTGTCATGCGGTTTCCAAGGTGCACATTTTGGGGCGAACTCCTTCTaGCACATGGGGCAGCTGCGC +
Preference number: 4 (lower is better)
Translates to: SAGTLPRGLSCGFQGAHFGANSF*HMGQLR
Trigger: GCGCAGCTGCCCCATGTGCCAGAAGGAGTTCGCCCC...AAAATGTGCACCTTGGAAACCGCATGACAGCCCCCTCGGCAGGGTCCCCGCGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000400918.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp GAGACAGACAGGAGCCCGCCCTGCTTTAATGCGCATGCGGGGGAGCCGAGAGGCTCTGCGCAGGGCTCTTaGATGGCGCTCACCACGTCA +
Preference number: 4 (lower is better)
Translates to: ETDRSPPCFNAHAGEPRGSAQGS*MALTTS
Trigger: TGACGTGGTGAGCGCCATCCAAGAGCCCTGCGCAGA...GCCTCTCGGCTCCCCCGCATGCGCATTAAAGCAGGGCGGGCTCCTGTCTGTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378543.2
ENST00000378546.9
CDS-3UTR CCA 90 bp CCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGAGGCCAGCTTCGTGCTaGAGGAACTTGCTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: PASCWRNLLLCLRRGGSARPASC*RNLLLC
Trigger: GCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCT...CGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400918.7
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp ACCTGGGCCCGGGCAGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCCGTGCGTCTCTGTCGTaGACACGCGTGATTGACCCT +
Preference number: 4 (lower is better)
Translates to: TWARAGQLRAGGTCCCACRASLS*TRVIDP
Trigger: AGGGTCAATCACGCGTGTCCACGACAGAGACGCACG...GCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCCCGGGCCCAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp GGGCCCGGGCAGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGGTGTCATCTCTCCAGTaGGCGTTGGGGGAGGATTCT +
Preference number: 4 (lower is better)
Translates to: GPGQASFVLEELAAVPASVSSLQ*ALGEDS
Trigger: AGAATCCTCCCCCAACGCCCACTGGAGAGATGACAC...CGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCCCGGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp GCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAGGGGGCTGTCATGCAGACGACTACGGTCTaGACAACTTTGACACACAGT +
Preference number: 4 (lower is better)
Translates to: AVPASRRIRGDPAEGAVMQTTTV*TTLTHS
Trigger: ACTGTGTGTCAAAGTTGTCCAGACCGTAGTCGTCTG...CATGACAGCCCCCTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp CTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAGGGGGCTGTCATGCCAGACGACTACGGTCTaGACAACTTTGACACACAGT +
Preference number: 4 (lower is better)
Translates to: LCLRRGGSAGTLPRGLSCQTTTV*TTLTHS
Trigger: ACTGTGTGTCAAAGTTGTCCAGACCGTAGTCGTCTG...GCATGACAGCCCCCTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp TGGGCGTTGGGGGAGGATTCTTATGCGAACGTGACTCCGCTTCCCCCAAGGGAAGGGCCTGCGTGGGCGTaGTGCGGGGCAACTGCCCAT +
Preference number: 4 (lower is better)
Translates to: WALGEDSYANVTPLPPREGPAWA*CGATAH
Trigger: ATGGGCAGTTGCCCCGCACCACGCCCACGCAGGCCC...TTCCCTTGGGGGAAGCGGAGTCACGTTCGCATAAGAATCCTCCCCCAACGCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp CCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAGCAGAACAGTCCCTCCTGGTGCACAGGTGTaGAAATTGCCACGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: PRPQREASAGAAGSRTVPPGAQV*KLPRSP
Trigger: AGGGCTGCGTGGCAATTTCCACACCTGTGCACCAGG...AGGGACTGTTCTGCTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp AGTCCCTCACACCTGGGCCCGGGCAGGCCAGCTTCGTGCTGGAGGAACTTGCTGGCCAGGTGTCAGGTGTaGCAGAGCCGTCTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: SPSHLGPGRPASCWRNLLARCQV*QSRLLS
Trigger: GCTCAGAAGACGGCTCTGCCACACCTGACACCTGGC...CAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCCCGGGCCCAGGTGTGAGGGACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp AGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAGCAGAACAGTCCCTCACGCCAGGTGTCAGGTGTaGCAGAGCCGTCTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: RPQREASAGAAGSRTVPHARCQV*QSRLLS
Trigger: GCTCAGAAGACGGCTCTGCCACACCTGACACCTGGC...GTGAGGGACTGTTCTGCTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp CAACCCATTATTGCTGTCCACCGAGGAGTCGGTGTGAGGCCGCGTGCGTCTCTGGGTGGGGGCGGGAGTTaGAGTACCTGGGGGCGAACT +
Preference number: 4 (lower is better)
Translates to: QPIIAVHRGVGVRPRASLGGGGS*STWGRT
Trigger: AGTTCGCCCCCAGGTACTTCAACTCCCGCCCCCACC...CAGAGACGCACGCGGCCTCACACCGACTCCTCGGTGGACAGCAATAATGGGTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000400919.7
CDS-3UTR TCA 90 bp ACCTGGGCCCGGGCAGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCATTCTTATGCGAACGTaGCTCCGCTTCCCCCAAGGG +
Preference number: 4 (lower is better)
Translates to: TWARAGQLRAGGTCCCACILMRT*LRFPQG
Trigger: CCCTTGGGGGAAGCGGAGTCACGTTCGCATAAGAAT...GCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCCCGGGCCCAGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp CAGTGGGCGTTGGGGGAGGATTCTTATGCGAACGTGACTCCGCTTCCCCCAAGGGCGAGCCCGTGCAGCTaGCCCCAGACGATGAGTGAG +
Preference number: 4 (lower is better)
Translates to: QWALGEDSYANVTPLPPRASPCS*PQTMSE
Trigger: CTCACTCATCGTCTGGGGTCAGCTGCACGGGCTCGC...CCTTGGGGGAAGCGGAGTCACGTTCGCATAAGAATCCTCCCCCAACGCCCACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp TCTGTGCTTTCGGCCAAGCACTGGGCCAGGTGGCTGTCAACATCCAGCTGGGTCGCGAGCCCGTGCAGCTaGCCCCAGACGATGAGTGAG +
Preference number: 4 (lower is better)
Translates to: SVLSAKHWARWLSTSSWVASPCS*PQTMSE
Trigger: CTCACTCATCGTCTGGGGTCAGCTGCACGGGCTCGC...GACCCAGCTGGATGTTGACAGCCACCTGGCCCAGTGCTTGGCCGAAAGCACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428120.5
CDS-3UTR TCA 90 bp GGAGCAGAACAGTCCCTCACACCTGGGCCCGGGCAGGCCAGCTTCGTGCTGGAGATGCCCGCGCGGAGCTaGCCCTTCTCCTATTGTTTT +
Preference number: 4 (lower is better)
Translates to: GAEQSLTPGPGQASFVLEMPARS*PFSYCF
Trigger: AAAACAATAGGAGAAGGGTCAGCTCCGCGCGGGCAT...CTCCAGCACGAAGCTGGCCTGCCCGGGCCCAGGTGTGAGGGACTGTTCTGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp GGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGTCTCGAAAACTCTGGTaGCTTGGGGGCTGCACAGTG +
Preference number: 4 (lower is better)
Translates to: GQLRAGGTCCCACVAADPSRKLW*LGGCTV
Trigger: CACTGTGCAGCCCCCAAGTCACCAGAGTTTTCGAGA...CGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp GGGACCCTGCCGAGGGGGCTGTCATGCGGTTTCCAAGGTGCACATTTTCCACGGGCCACCTCATGCCTCTaGGTGAGGCCTGGTGCACAG +
Preference number: 4 (lower is better)
Translates to: GTLPRGLSCGFQGAHFPRATSCL*VRPGAQ
Trigger: CTGTGCACCAGGCCTCACTCAGAGGCATGAGGTGGC...CCGTGGAAAATGTGCACCTTGGAAACCGCATGACAGCCCCCTCGGCAGGGTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp ACAGACAGGAGCCCGCCCTGCTTTAATGCGCATGCGGGGGAGCCGAGAGGCGGGACGTCACGTCTTCTGTaGTTTCGGCCAAGCACTGGG +
Preference number: 4 (lower is better)
Translates to: TDRSPPCFNAHAGEPRGGTSRLL*FRPSTG
Trigger: CCCAGTGCTTGGCCGAAAGCACAGAAGACGTGACGT...CCCGCCTCTCGGCTCCCCCGCATGCGCATTAAAGCAGGGCGGGCTCCTGTCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378543.2
ENST00000378546.9
CDS-3UTR GCA 90 bp GGGCGCCGCACTCTGCGCAGGGCTCTTGGATGGCGCTCACCACGTCACGTCTTCACGTCACGTCTTCTGTaGTTTCGGCCAAGCACTGGG +
Preference number: 4 (lower is better)
Translates to: GRRTLRRALGWRSPRHVFTSRLL*FRPSTG
Trigger: CCCAGTGCTTGGCCGAAAGCACAGAAGACGTGACGT...GAAGACGTGACGTGGTGAGCGCCATCCAAGAGCCCTGCGCAGAGTGCGGCGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378543.2
ENST00000440825.6
CDS-3UTR GCA 90 bp GACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAGCAGAACAGTCCCTCACACTCGATGCACTGACCTaGTCCGCCAGGAAAGTGAGC +
Preference number: 4 (lower is better)
Translates to: DRRGKRQRALLGAEQSLTLDALT*SARKVS
Trigger: GCTCACTTTCCTGGCGGAGCAGGTCAGTGCATCGAG...TGTGAGGGACTGTTCTGCTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp AGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAGCAGAACAGTCCCTCACCCGAGGGGGCTGTCATaGGGTTTCCAAGGTGCACAT +
Preference number: 4 (lower is better)
Translates to: RPQREASAGAAGSRTVPHPRGLS*GFQGAH
Trigger: ATGTGCACCTTGGAAACCGCATGACAGCCCCCTCGG...GTGAGGGACTGTTCTGCTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp AACAGAACTCGATGCACTGACCTGCTCCGCCAGGAAAGTGAGCGTGTAGCGTCCGATCCGCGGGGACCCTaGCGAGGGGGCTGTCATGCG +
Preference number: 4 (lower is better)
Translates to: NRTRCTDLLRQESERVASDPRGP*RGGCHA
Trigger: CGCATGACAGCCCCCTCGGCAGGGTCCCCGCGGATC...GGACGCTACACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCATCGAGTTCTGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400918.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp CCAAGCTGGAGAAGAAGCAGGCGCTCCCTCCATTCCAGCCACAGATCACAGACGACTTGCTGCTGTGCCTaGGTCGCGGCGGATCCGCGG +
Preference number: 4 (lower is better)
Translates to: PSWRRSRRSLHSSHRSQTTCCCA*VAADPR
Trigger: CCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGT...CGTCTGTGATCTGTGGCTGGAATGGAGGGAGCGCCTGCTTCTTCTCCAGCTTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp CTTGAGTCCCACCCGCCTGGTGTCATCTCTCCAGTGGGCGTTGGGGGAGGATTCAGGAACTTGCTGCTGTaGCTGCGTCGCGGCGGATCC +
Preference number: 4 (lower is better)
Translates to: LESHPPGVISPVGVGGGFRNLLL*LRRGGS
Trigger: GGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCT...GAATCCTCCCCCAACGCCCACTGGAGAGATGACACCAGGCGGGTGGGACTCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp GGGACCCTGCCGAGGGGGCTGTCATGCGGTTTCCAAGGTGCACATTTTCCACGGCGTGCTGGAGGAACTTaGTGCTGTGCCTGCGTCGCG +
Preference number: 4 (lower is better)
Translates to: GTLPRGLSCGFQGAHFPRRAGGT*CCACVA
Trigger: CGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACG...CCGTGGAAAATGTGCACCTTGGAAACCGCATGACAGCCCCCTCGGCAGGGTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400918.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp ACCTGGGCCCGGGCAGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGGGGGAGGATTCTTATaGGAACGTGACTCCGCTTCC +
Preference number: 4 (lower is better)
Translates to: TWARAGQLRAGGTCCCACGGGFL*ERDSAS
Trigger: GGAAGCGGAGTCACGTTCGCATAAGAATCCTCCCCC...GCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCCCGGGCCCAGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp TGTGCTTTCGGCCAAGCACTGGGCCAGGTGGCTGTCAACATCCAGCTGGGTCAGGGGGCGAACTCCTTCTaGCACATGGGGCAGCTGCGC +
Preference number: 4 (lower is better)
Translates to: CAFGQALGQVAVNIQLGQGANSF*HMGQLR
Trigger: GCGCAGCTGCCCCATGTGCCAGAAGGAGTTCGCCCC...CTGACCCAGCTGGATGTTGACAGCCACCTGGCCCAGTGCTTGGCCGAAAGCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000428120.5
ENST00000440825.6
CDS-3UTR CCA 90 bp CCTCTGAGTGAGGCCTGGTGCACAGGTGTGGAAATTGCCACGCAGCCCTCTTGGCCAGCTGGGTCAGCCTaGGGGCGAACTCCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: PLSEAWCTGVEIATQPSWPAGSA*GRTPSG
Trigger: GCCAGAAGGAGTTCGCCCCCAGGCTGACCCAGCTGG...CCAAGAGGGCTGCGTGGCAATTTCCACACCTGTGCACCAGGCCTCACTCAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414253.5
CDS-3UTR CCA 90 bp ACAGAGACAGACAGGAGCCCGCCCTGCTTTAATGCGCATGCGGGGGAGCCGAGACGCAGGGCTCTTGGATaGCGCTCACCACGTCACGTC +
Preference number: 4 (lower is better)
Translates to: TETDRSPPCFNAHAGEPRRRALG*RSPRHV
Trigger: GACGTGACGTGGTGAGCGCCATCCAAGAGCCCTGCG...TCTCGGCTCCCCCGCATGCGCATTAAAGCAGGGCGGGCTCCTGTCTGTCTCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378543.2
ENST00000378546.9
CDS-3UTR CCA 90 bp GGATCCGCGGGGACCCTGCCGAGGGGGCTGTCATGCGGTTTCCAAGGTGCACATAGGCCAGCTTCGTGCTaGAGGAACTTGCTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: GSAGTLPRGLSCGFQGAHRPASC*RNLLLC
Trigger: GCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCT...ATGTGCACCTTGGAAACCGCATGACAGCCCCCTCGGCAGGGTCCCCGCGGATCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400918.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp AGTGAGGCCTGGTGCACAGGTGTGGAAATTGCCACGCAGCCCTCTTGGCCAGGCGTCAGCGGGCGCTGCTaGGAGCAGAACAGTCCCTCA +
Preference number: 4 (lower is better)
Translates to: SEAWCTGVEIATQPSWPGVSGRC*EQNSPS
Trigger: TGAGGGACTGTTCTGCTCCCAGCAGCGCCCGCTGAC...GCCTGGCCAAGAGGGCTGCGTGGCAATTTCCACACCTGTGCACCAGGCCTCACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp CGGGGCAACTGCCCATGGAGCCCGTGGCTGGCCGGCTCTCCTGTGGATGACACTCTCTCCAGTGGGCGTTaGGGGAGGATTCTTATGCGA +
Preference number: 4 (lower is better)
Translates to: RGNCPWSPWLAGSPVDDTLSSGR*GRILMR
Trigger: TCGCATAAGAATCCTCCCCCAACGCCCACTGGAGAG...AGTGTCATCCACAGGAGAGCCGGCCAGCCACGGGCTCCATGGGCAGTTGCCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428120.5
CDS-3UTR CCA 90 bp GGATCCGCGGGGACCCTGCCGAGGGGGCTGTCATGCGGTTTCCAAGGTGCACATTGGCCGGCTCTCCTGTaGATGACACTCACCCTTGAC +
Preference number: 4 (lower is better)
Translates to: GSAGTLPRGLSCGFQGAHWPALL*MTLTLD
Trigger: GTCAAGGGTGAGTGTCATCCACAGGAGAGCCGGCCA...ATGTGCACCTTGGAAACCGCATGACAGCCCCCTCGGCAGGGTCCCCGCGGATCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp CGTCACGTCTTCTGTGCTTTCGGCCAAGCACTGGGCCAGGTGGCTGTCAACATCTGCCCATGGAGCCCGTaGCTGGCCGGCTCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: RHVFCAFGQALGQVAVNICPWSP*LAGSPV
Trigger: CACAGGAGAGCCGGCCAGCCACGGGCTCCATGGGCA...GATGTTGACAGCCACCTGGCCCAGTGCTTGGCCGAAAGCACAGAAGACGTGACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428120.5
CDS-3UTR CCA 90 bp GCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAGGGGGCTGTCATGTGCCGGTTACCAGTTTaGCCGTTCTTGTACACAATA +
Preference number: 4 (lower is better)
Translates to: AVPASRRIRGDPAEGAVMCRLPV*PFLYTI
Trigger: TATTGTGTACAAGAACGGCCAAACTGGTAACCGGCA...CATGACAGCCCCCTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp CCAAGCTGGAGAAGAAGCAGGCGCTCCCTCCATTCCAGCCACAGATCACAGACGGCGAGCCCGTGCAGCTaGCCCCAGACGATGAGTGAG +
Preference number: 4 (lower is better)
Translates to: PSWRRSRRSLHSSHRSQTASPCS*PQTMSE
Trigger: CTCACTCATCGTCTGGGGTCAGCTGCACGGGCTCGC...CGTCTGTGATCTGTGGCTGGAATGGAGGGAGCGCCTGCTTCTTCTCCAGCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp AGTCCCTCACACCTGGGCCCGGGCAGGCCAGCTTCGTGCTGGAGGAACTTGCTGATGCCCGCGCGGAGCTaGCCCTTCTCCTATTGTTTT +
Preference number: 4 (lower is better)
Translates to: SPSHLGPGRPASCWRNLLMPARS*PFSYCF
Trigger: AAAACAATAGGAGAAGGGTCAGCTCCGCGCGGGCAT...CAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCCCGGGCCCAGGTGTGAGGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp CTCACACCTGGGCCCGGGCAGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGATGCCCGCGCGGAGCTaGCCCTTCTCCTATTGTTTT +
Preference number: 4 (lower is better)
Translates to: LTPGPGQASFVLEELAAVMPARS*PFSYCF
Trigger: AAAACAATAGGAGAAGGGTCAGCTCCGCGCGGGCAT...CACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCCCGGGCCCAGGTGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp CACAACACAGAGACAGACAGGAGCCCGCCCTGCTTTAATGCGCATGCGGGGGAGGACAGGAGCCCGCCCTaGTTTAATGCGCATGCGGGG +
Preference number: 4 (lower is better)
Translates to: HNTETDRSPPCFNAHAGEDRSPP*FNAHAG
Trigger: CCCCGCATGCGCATTAAAGCAGGGCGGGCTCCTGTC...CTCCCCCGCATGCGCATTAAAGCAGGGCGGGCTCCTGTCTGTCTCTGTGTTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378543.2
ENST00000378546.9
CDS-3UTR GCA 90 bp CGGCTGGTGGCTAAATACTGCCGTGTTGCCAGTAGCGTGCCGGTTACCAGTTTGGCTCCGGGCTCACCGTaGGCAGTAGCTCGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: RLVAKYCRVASSVPVTSLAPGSP*AVARPR
Trigger: TCTGGGCCGAGCTACTGCGCACGGTGAGCCCGGAGC...CAAACTGGTAACCGGCACGCTACTGGCAACACGGCAGTATTTAGCCACCAGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp ATCCGCGGGGACCCTGCCGAGGGGGCTGTCATGCGGTTTCCAAGGTGCACATTTTCCGTGAGTGGCGCCTaGCCCACATCTCAGACGCAA +
Preference number: 4 (lower is better)
Translates to: IRGDPAEGAVMRFPRCTFSVSGA*PTSQTQ
Trigger: TTGCGTCTGAGATGTGGGGCAGGCGCCACTCACGGA...AAATGTGCACCTTGGAAACCGCATGACAGCCCCCTCGGCAGGGTCCCCGCGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000400918.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp AACAGAACTCGATGCACTGACCTGCTCCGCCAGGAAAGTGAGCGTGTAGCGTCCACTTGCTGCTGTGCCTaGGTCGCGGCGGATCCGCGG +
Preference number: 4 (lower is better)
Translates to: NRTRCTDLLRQESERVASTCCCA*VAADPR
Trigger: CCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGT...GGACGCTACACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCATCGAGTTCTGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400918.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp AGTGAGGCCTGGTGCACAGGTGTGGAAATTGCCACGCAGCCCTCTTGGCCAGGCGGCAGGCCAGCTTCGTaGTGGAGGAACTTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SEAWCTGVEIATQPSWPGGRPAS*WRNLLL
Trigger: CAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCC...GCCTGGCCAAGAGGGCTGCGTGGCAATTTCCACACCTGTGCACCAGGCCTCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp GACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAGCAGAACAGTCCCTCACAGGGGGAGGATTCTTATaGGAACGTGACTCCGCTTCC +
Preference number: 4 (lower is better)
Translates to: DRRGKRQRALLGAEQSLTGGGFL*ERDSAS
Trigger: GGAAGCGGAGTCACGTTCGCATAAGAATCCTCCCCC...TGTGAGGGACTGTTCTGCTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp TGGGCCTGCGTGGGCGTGGTGCGGGGCAACTGCCCATGGAGCCCGTGGCTGGCCGGTCATTCAAAGTCTTaGACATCCATGAAAGACACG +
Preference number: 4 (lower is better)
Translates to: WACVGVVRGNCPWSPWLAGHSKS*TSMKDT
Trigger: CGTGTCTTTCATGGATGTGCAAGACTTTGAATGACC...GGCCAGCCACGGGCTCCATGGGCAGTTGCCCCGCACCACGCCCACGCAGGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp GGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCTGGTGGCTAAATACTaGCGTGTTGCCAGTAGCGTG +
Preference number: 4 (lower is better)
Translates to: GQLRAGGTCCCACVAADPLVAKY*RVASSV
Trigger: CACGCTACTGGCAACACGGCAGTATTTAGCCACCAG...CGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp CGTGTCCGGGCGCCGCACTCTGCGCAGGGCTCTTGGATGGCGCTCACCACGTCAGTTGTTGTTGTTGGCTaGCAACTTTGGACTCCGGTG +
Preference number: 4 (lower is better)
Translates to: RVRAPHSAQGSWMALTTSVVVVG*QLWTPV
Trigger: CACCGGAGTCCAAAGTTGGCAGCCAACAACAACAAC...TGACGTGGTGAGCGCCATCCAAGAGCCCTGCGCAGAGTGCGGCGCCCGGACACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440825.6
CDS-3UTR CCA 90 bp TATTGCTGTCCACCGAGGAGTCGGTGTGAGGCCGCGTGCGTCTCTGTCGTGGACCTGTCAACATCCAGCTaGGTCAGCCTGGGGGCGAAC +
Preference number: 4 (lower is better)
Translates to: YCCPPRSRCEAACVSVVDLSTSS*VSLGAN
Trigger: GTTCGCCCCCAGGCTGACCCAGCTGGATGTTGACAG...GTCCACGACAGAGACGCACGCGGCCTCACACCGACTCCTCGGTGGACAGCAATA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414253.5
CDS-3UTR CCA 90 bp TCACACCTGGGCCCGGGCAGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCGTGTCATCTCTCCAGTaGGCGTTGGGGGAGGATTCT +
Preference number: 4 (lower is better)
Translates to: SHLGPGRPASCWRNLLLCVSSLQ*ALGEDS
Trigger: AGAATCCTCCCCCAACGCCCACTGGAGAGATGACAC...GCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCCCGGGCCCAGGTGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp CAATCTGGTAGGGATGATGCCCGCGCGGAGCTGACCCTTCTCCTATTGTTTTTCCCTCGGGCAGCCCCATaGCAGGCCGGCACCTTGGGC +
Preference number: 4 (lower is better)
Translates to: QSGRDDARAELTLLLLFFPRAAP*QAGTLG
Trigger: GCCCAAGGTGCCGGCCTGCCATGGGGCTGCCCGAGG...GAAAAACAATAGGAGAAGGGTCAGCTCCGCGCGGGCATCATCCCTACCAGATTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp CTTGAGTCCCACCCGCCTGGTGTCATCTCTCCAGTGGGCGTTGGGGGAGGATTCATGAGTGAGTCCCACTaGGTGCGGGTCCCTGGAGCA +
Preference number: 4 (lower is better)
Translates to: LESHPPGVISPVGVGGGFMSESH*VRVPGA
Trigger: TGCTCCAGGGACCCGCACCCAGTGGGACTCACTCAT...GAATCCTCCCCCAACGCCCACTGGAGAGATGACACCAGGCGGGTGGGACTCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp AGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCAAAACTCTGGTGACTTaGGGGCTGCACAGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: RPASCWRNLLLCLRRGGSKTLVT*GLHSGP
Trigger: AGGCCCACTGTGCAGCCCCCAAGTCACCAGAGTTTT...GGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp ATCACAACACAGAGACAGACAGGAGCCCGCCCTGCTTTAATGCGCATGCGGGGGTGGGAAGGCGGGCAGTaGAGGCACCTCGTGATCCAG +
Preference number: 4 (lower is better)
Translates to: ITTQRQTGARPALMRMRGWEGGQ*RHLVIQ
Trigger: CTGGATCACGAGGTGCCTTCACTGCCCGCCTTCCCA...CCCCCGCATGCGCATTAAAGCAGGGCGGGCTCCTGTCTGTCTCTGTGTTGTGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378546.9
CDS-3UTR TCA 90 bp GCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAGGGGGCTGTCATGAATAAAATGTTCCGATaGTGTGGAAGCTCCTCTGAT +
Preference number: 4 (lower is better)
Translates to: AVPASRRIRGDPAEGAVMNKMFR*CGSSSD
Trigger: ATCAGAGGAGCTTCCACATCATCGGAACATTTTATT...CATGACAGCCCCCTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000400918.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp GGTGTGAGGCCGCGTGCGTCTCTGTCGTGGACACGCGTGATTGACCCTTTAACTGCTCCGCCAGGAAAGTaGGCGTGTAGCGTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: GVRPRASLSWTRVIDPLTAPPGK*ACSVLR
Trigger: CCTCAGGACGCTACACGCTCACTTTCCTGGCGGAGC...AGTTAAAGGGTCAATCACGCGTGTCCACGACAGAGACGCACGCGGCCTCACACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp GGGACCCTGCCGAGGGGGCTGTCATGCGGTTTCCAAGGTGCACATTTTCCACGGCAGAACTCGATGCACTaGCCTGCTCCGCCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: GTLPRGLSCGFQGAHFPRQNSMH*PAPPGK
Trigger: CTTTCCTGGCGGAGCAGGTCAGTGCATCGAGTTCTG...CCGTGGAAAATGTGCACCTTGGAAACCGCATGACAGCCCCCTCGGCAGGGTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400918.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp CTTGAGTCCCACCCGCCTGGTGTCATCTCTCCAGTGGGCGTTGGGGGAGGATTCCAGAACTCGATGCACTaGCCTGCTCCGCCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: LESHPPGVISPVGVGGGFQNSMH*PAPPGK
Trigger: CTTTCCTGGCGGAGCAGGTCAGTGCATCGAGTTCTG...GAATCCTCCCCCAACGCCCACTGGAGAGATGACACCAGGCGGGTGGGACTCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp CCGAGGGGGCTGTCATGCGGTTTCCAAGGTGCACATTTTCCACGGAAACAGAACGCTCCGGGCTCACCGTaGGCAGTAGCTCGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: PRGLSCGFQGAHFPRKQNAPGSP*AVARPR
Trigger: TCTGGGCCGAGCTACTGCGCACGGTGAGCCCGGAGC...GTTCTGTTTCCGTGGAAAATGTGCACCTTGGAAACCGCATGACAGCCCCCTCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400918.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp GTCCCACCCGCCTGGTGTCATCTCTCCAGTGGGCGTTGGGGGAGGATTCTTATGTCCGTGAGTGGCGCCTaGCCCACATCTCAGACGCAA +
Preference number: 4 (lower is better)
Translates to: VPPAWCHLSSGRWGRILMSVSGA*PTSQTQ
Trigger: TTGCGTCTGAGATGTGGGGCAGGCGCCACTCACGGA...CATAAGAATCCTCCCCCAACGCCCACTGGAGAGATGACACCAGGCGGGTGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp GGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAATGCGGTTTCCAAGGTaGACATTTTCCACGGAAACA +
Preference number: 4 (lower is better)
Translates to: GGTCCCACVAADPRGPCRMRFPR*TFSTET
Trigger: TGTTTCCGTGGAAAATGTGCACCTTGGAAACCGCAT...TCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400918.7
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp TCTTCTGTGCTTTCGGCCAAGCACTGGGCCAGGTGGCTGTCAACATCCAGCTGGAGGAACTTGCTGCTGTaGCTGCGTCGCGGCGGATCC +
Preference number: 4 (lower is better)
Translates to: SSVLSAKHWARWLSTSSWRNLLL*LRRGGS
Trigger: GGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCT...CCAGCTGGATGTTGACAGCCACCTGGCCCAGTGCTTGGCCGAAAGCACAGAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428120.5
CDS-3UTR GCA 90 bp CCAAGCTGGAGAAGAAGCAGGCGCTCCCTCCATTCCAGCCACAGATCACAGACGCGTGCTGGAGGAACTTaGTGCTGTGCCTGCGTCGCG +
Preference number: 4 (lower is better)
Translates to: PSWRRSRRSLHSSHRSQTRAGGT*CCACVA
Trigger: CGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACG...CGTCTGTGATCTGTGGCTGGAATGGAGGGAGCGCCTGCTTCTTCTCCAGCTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp GCTGGGAGCAGAACAGTCCCTCACACCTGGGCCCGGGCAGGCCAGCTTCGTGCTCTTTGCCCACAGGGATaGCATAAAGAGGATCGACCA +
Preference number: 4 (lower is better)
Translates to: AGSRTVPHTWARAGQLRALCPQG*HKEDRP
Trigger: TGGTCGATCCTCTTTATGGCATCCCTGTGGGCAAAG...AGCACGAAGCTGGCCTGCCCGGGCCCAGGTGTGAGGGACTGTTCTGCTCCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp GGAGAACACCAAGGCTGTGAGAAATGGGAGGCCTCCTGGCAGCTCCACTCCCCACTCCAGCAACCCACCTaGCTCAGCCTCTCAAAGGGC +
Preference number: 4 (lower is better)
Translates to: GEHQGCEKWEASWQLHSPLQQPT*LSLSKG
Trigger: GCCCTTTGAGAGGCTGAGGCAGGTGGGTTGCTGGAG...TGGGGAGTGGAGCTGCCAGGAGGCCTCCCATTTCTCACAGCCTTGGTGTTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420515.1
CDS-3UTR CCA 90 bp CTTCTGTGCTTTCGGCCAAGCACTGGGCCAGGTGGCTGTCAACATCCAGCTGGGCTGTCAACATCCAGCTaGGTCAGCCTGGGGGCGAAC +
Preference number: 4 (lower is better)
Translates to: LLCFRPSTGPGGCQHPAGLSTSS*VSLGAN
Trigger: GTTCGCCCCCAGGCTGACCCAGCTGGATGTTGACAG...CCCAGCTGGATGTTGACAGCCACCTGGCCCAGTGCTTGGCCGAAAGCACAGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378543.2
CDS-3UTR CCA 90 bp TGCGCAGGGCTCTTGGATGGCGCTCACCACGTCACGTCTTCTGTGCTTTCGGCCAAGCACTGGGCCAGGTaGCTGTCAACATCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: CAGLLDGAHHVTSSVLSAKHWAR*LSTSSW
Trigger: CCAGCTGGATGTTGACAGCCACCTGGCCCAGTGCTT...GGCCGAAAGCACAGAAGACGTGACGTGGTGAGCGCCATCCAAGAGCCCTGCGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378543.2
ENST00000440825.6
CDS-3UTR CCA 90 bp GGCGTTGGGGGAGGATTCTTATGCGAACGTGACTCCGCTTCCCCCAAGGGAATGCCAGCGGGACACAGGTaGGGGCGGGAGTTGAAGTAC +
Preference number: 4 (lower is better)
Translates to: GVGGGFLCERDSASPKGMPAGHR*GRELKY
Trigger: GTACTTCAACTCCCGCCCCCACCTGTGTCCCGCTGG...CATTCCCTTGGGGGAAGCGGAGTCACGTTCGCATAAGAATCCTCCCCCAACGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp CTTGAGTCCCACCCGCCTGGTGTCATCTCTCCAGTGGGCGTTGGGGGAGGATTCAGGCCAGCTTCGTGCTaGAGGAACTTGCTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: LESHPPGVISPVGVGGGFRPASC*RNLLLC
Trigger: GCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCT...GAATCCTCCCCCAACGCCCACTGGAGAGATGACACCAGGCGGGTGGGACTCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp TATTGCTGTCCACCGAGGAGTCGGTGTGAGGCCGCGTGCGTCTCTGTCGTGGACCGTGCGTCTCTGTCGTaGACACGCGTGATTGACCCT +
Preference number: 4 (lower is better)
Translates to: YCCPPRSRCEAACVSVVDRASLS*TRVIDP
Trigger: AGGGTCAATCACGCGTGTCCACGACAGAGACGCACG...GTCCACGACAGAGACGCACGCGGCCTCACACCGACTCCTCGGTGGACAGCAATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp AACACTCAATCTGGTAGGGATGATGCCCGCGCGGAGCTGACCCTTCTCCTATTGTGCCCATGGAGCCCGTaGCTGGCCGGCTCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: NTQSGRDDARAELTLLLLCPWSP*LAGSPV
Trigger: CACAGGAGAGCCGGCCAGCCACGGGCTCCATGGGCA...CAATAGGAGAAGGGTCAGCTCCGCGCGGGCATCATCCCTACCAGATTGAGTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp TCTCCTATTGTTTTTCCAAGCTGGAGAAGAAGCAGGCGCTCCCTCCATTCCAGCCGGGGCAACTGCCCATaGAGCCCGTGGCTGGCCGGC +
Preference number: 4 (lower is better)
Translates to: SPIVFPSWRRSRRSLHSSRGNCP*SPWLAG
Trigger: GCCGGCCAGCCACGGGCTCCATGGGCAGTTGCCCCG...GCTGGAATGGAGGGAGCGCCTGCTTCTTCTCCAGCTTGGAAAAACAATAGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp TTTCCAAGCTGGAGAAGAAGCAGGCGCTCCCTCCATTCCAGCCACAGATCACAGCACAGTGGGCCTGCGTaGGCGTGGTGCGGGGCAACT +
Preference number: 4 (lower is better)
Translates to: FPSWRRSRRSLHSSHRSQHSGPA*AWCGAT
Trigger: AGTTGCCCCGCACCACGCCCACGCAGGCCCACTGTG...CTGTGATCTGTGGCTGGAATGGAGGGAGCGCCTGCTTCTTCTCCAGCTTGGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp AGACCAAGTCCGGCTGTTAGACCAGACCCTCCAATCCAGGCGGCCTCCCTGCTGCTGGTCTCAAACTCCTaGGCTCCAGCAACCCACCTG +
Preference number: 4 (lower is better)
Translates to: RPSPAVRPDPPIQAASLLLVSNS*APATHL
Trigger: CAGGTGGGTTGCTGGAGCCCAGGAGTTTGAGACCAG...CAGCAGGGAGGCCGCCTGGATTGGAGGGTCTGGTCTAACAGCCGGACTTGGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420515.1
CDS-3UTR CCA 90 bp GGCACGCGCCACCACGCCCAGGCATGTAAAGATGGGATCTTGCCATGTTGCCCAAAATGGGAGGCCTCCTaGCAGCTCCACTCCCCAGAC +
Preference number: 4 (lower is better)
Translates to: GTRHHAQACKDGILPCCPKWEAS*QLHSPD
Trigger: GTCTGGGGAGTGGAGCTGCCAGGAGGCCTCCCATTT...TGGGCAACATGGCAAGATCCCATCTTTACATGCCTGGGCGTGGTGGCGCGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420515.1
CDS-3UTR CCA 90 bp GCCTGTGCGGGACAGGGCGACGGTTCAAGACCAAGTCCGGCTGTTAGACCAGACCAAGGCTGTGAGAAATaGGAGGCCTCCTGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: ACAGQGDGSRPSPAVRPDQGCEK*EASWQL
Trigger: GAGCTGCCAGGAGGCCTCCCATTTCTCACAGCCTTG...GTCTGGTCTAACAGCCGGACTTGGTCTTGAACCGTCGCCCTGTCCCGCACAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420515.1
CDS-3UTR TCA 90 bp CCCTGCCGAGGGGGCTGTCATGCGGTTTCCAAGGTGCACATTTTCCACGGAAACAGTGAAGGCACCTCGTaGTCCAGGATCAGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: PCRGGCHAVSKVHIFHGNSEGTS*SRISSG
Trigger: CCCGGAGCTGATCCTGGATCACGAGGTGCCTTCACT...GTTTCCGTGGAAAATGTGCACCTTGGAAACCGCATGACAGCCCCCTCGGCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400918.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp TGGGCCTGCGTGGGCGTGGTGCGGGGCAACTGCCCATGGAGCCCGTGGCTGGCCAGAGTTCGAAGGCTTTaGGTATATCAACCCATTATT +
Preference number: 4 (lower is better)
Translates to: WACVGVVRGNCPWSPWLARVRRL*VYQPII
Trigger: AATAATGGGTTGATATACTCAAAGCCTTCGAACTCT...GGCCAGCCACGGGCTCCATGGGCAGTTGCCCCGCACCACGCCCACGCAGGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp CTTGAGTCCCACCCGCCTGGTGTCATCTCTCCAGTGGGCGTTGGGGGAGGATTCATTCTTATGCGAACGTaGCTCCGCTTCCCCCAAGGG +
Preference number: 4 (lower is better)
Translates to: LESHPPGVISPVGVGGGFILMRT*LRFPQG
Trigger: CCCTTGGGGGAAGCGGAGTCACGTTCGCATAAGAAT...GAATCCTCCCCCAACGCCCACTGGAGAGATGACACCAGGCGGGTGGGACTCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp AAGAAGCAGGCGCTCCCTCCATTCCAGCCACAGATCACAGACGACTACGGTCTGGCTGACCCCAGACGATaGGTGAGTCCCACTGGGTGC +
Preference number: 4 (lower is better)
Translates to: KKQALPPFQPQITDDYGLADPRR*VSPTGC
Trigger: GCACCCAGTGGGACTCACTCATCGTCTGGGGTCAGC...CAGACCGTAGTCGTCTGTGATCTGTGGCTGGAATGGAGGGAGCGCCTGCTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp CCAAGCTGGAGAAGAAGCAGGCGCTCCCTCCATTCCAGCCACAGATCACAGACGCCTCATGCCTCTGAGTaGGGCCTGGTGCACAGGTGT +
Preference number: 4 (lower is better)
Translates to: PSWRRSRRSLHSSHRSQTPHASE*GLVHRC
Trigger: ACACCTGTGCACCAGGCCTCACTCAGAGGCATGAGG...CGTCTGTGATCTGTGGCTGGAATGGAGGGAGCGCCTGCTTCTTCTCCAGCTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp GTCCCACCCGCCTGGTGTCATCTCTCCAGTGGGCGTTGGGGGAGGATTCTTATGGAAGTACCCCTCAGGTaGAGGCACAGCTGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: VPPAWCHLSSGRWGRILMEVPLR*RHSCPE
Trigger: CTCTGGACAGCTGTGCCTTCACCTGAGGGGTACTTC...CATAAGAATCCTCCCCCAACGCCCACTGGAGAGATGACACCAGGCGGGTGGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp AACCCTTGTTCCCAAAGATATGGGGCTTGTCCCCCAGCTAGCCTGCCCATGCGGGGCCACAGCCTCGGGTaGGTTCCGGTTCCAAAGTAC +
Preference number: 4 (lower is better)
Translates to: NPCSQRYGACPPASLPMRGHSLG*VPVPKY
Trigger: GTACTTTGGAACCGGAACTCACCCGAGGCTGTGGCC...CCGCATGGGCAGGCTAGCTGGGGGACAAGCCCCATATCTTTGGGAACAAGGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000420515.1
CDS-3UTR GCA 90 bp GTCCCACCCGCCTGGTGTCATCTCTCCAGTGGGCGTTGGGGGAGGATTCTTATGCTCGATGCACTGACCTaGTCCGCCAGGAAAGTGAGC +
Preference number: 4 (lower is better)
Translates to: VPPAWCHLSSGRWGRILMLDALT*SARKVS
Trigger: GCTCACTTTCCTGGCGGAGCAGGTCAGTGCATCGAG...CATAAGAATCCTCCCCCAACGCCCACTGGAGAGATGACACCAGGCGGGTGGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp GCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAGCAGAACATGCGGTTTCCAAGGTaGACATTTTCCACGGAAACA +
Preference number: 4 (lower is better)
Translates to: ACAETAEGSVSGRCWEQNMRFPR*TFSTET
Trigger: TGTTTCCGTGGAAAATGTGCACCTTGGAAACCGCAT...GTTCTGCTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp CACATTTTCCACGGAAACAGAACTCGATGCACTGACCTGCTCCGCCAGGAAAGTGATCCGCGGGGACCCTaGCGAGGGGGCTGTCATGCG +
Preference number: 4 (lower is better)
Translates to: HIFHGNRTRCTDLLRQESDPRGP*RGGCHA
Trigger: CGCATGACAGCCCCCTCGGCAGGGTCCCCGCGGATC...ACTTTCCTGGCGGAGCAGGTCAGTGCATCGAGTTCTGTTTCCGTGGAAAATGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000400918.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp TTTTCCACGGAAACAGAACTCGATGCACTGACCTGCTCCGCCAGGAAAGTGAGCACTTGCTGCTGTGCCTaGGTCGCGGCGGATCCGCGG +
Preference number: 4 (lower is better)
Translates to: FSTETELDALTCSARKVSTCCCA*VAADPR
Trigger: CCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGT...GCTCACTTTCCTGGCGGAGCAGGTCAGTGCATCGAGTTCTGTTTCCGTGGAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400918.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp AGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAGCAGAACAGTCCCTCACCTTTGCCCACAGGGATaGCATAAAGAGGATCGACCA +
Preference number: 4 (lower is better)
Translates to: RPQREASAGAAGSRTVPHLCPQG*HKEDRP
Trigger: TGGTCGATCCTCTTTATGGCATCCCTGTGGGCAAAG...GTGAGGGACTGTTCTGCTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp AGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGACACTCACCCTTGACTaGCAGGGTCATTCAAAGTCT +
Preference number: 4 (lower is better)
Translates to: SFVLEELAAVPASRRIRGTLTLD*QGHSKS
Trigger: AGACTTTGAATGACCCTGGCAGTCAAGGGTGAGTGT...CCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp ACTTCACTACAGCCTCCAATTCCTGGCTCAAGGGAATCCTCCCACTTCAGCCTCTCCAGGCGGCCTCCCTaGTGGGGTCCTGTGCGGTCA +
Preference number: 4 (lower is better)
Translates to: TSLQPPIPGSRESSHFSLSRRPP*WGPVRS
Trigger: TGACCGCACAGGACCCCAGCAGGGAGGCCGCCTGGA...GAGGCTGAAGTGGGAGGATTCCCTTGAGCCAGGAATTGGAGGCTGTAGTGAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420515.1
CDS-3UTR CCA 90 bp TTTCCAAGCTGGAGAAGAAGCAGGCGCTCCCTCCATTCCAGCCACAGATCACAGGGGGCGAACTCCTTCTaGCACATGGGGCAGCTGCGC +
Preference number: 4 (lower is better)
Translates to: FPSWRRSRRSLHSSHRSQGANSF*HMGQLR
Trigger: GCGCAGCTGCCCCATGTGCCAGAAGGAGTTCGCCCC...CTGTGATCTGTGGCTGGAATGGAGGGAGCGCCTGCTTCTTCTCCAGCTTGGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp CAGTGGGCGTTGGGGGAGGATTCTTATGCGAACGTGACTCCGCTTCCCCCAAGGAAGCACTGGGCCAGGTaGCTGTCAACATCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: QWALGEDSYANVTPLPPRKHWAR*LSTSSW
Trigger: CCAGCTGGATGTTGACAGCCACCTGGCCCAGTGCTT...CCTTGGGGGAAGCGGAGTCACGTTCGCATAAGAATCCTCCCCCAACGCCCACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp TCTGTGCTTTCGGCCAAGCACTGGGCCAGGTGGCTGTCAACATCCAGCTGGGTCCTTTCGGCCAAGCACTaGGCCAGGTGGCTGTCAACA +
Preference number: 4 (lower is better)
Translates to: SVLSAKHWARWLSTSSWVLSAKH*ARWLST
Trigger: TGTTGACAGCCACCTGGCCCAGTGCTTGGCCGAAAG...GACCCAGCTGGATGTTGACAGCCACCTGGCCCAGTGCTTGGCCGAAAGCACAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428120.5
ENST00000440825.6
CDS-3UTR CCA 90 bp ACTCTGCGCAGGGCTCTTGGATGGCGCTCACCACGTCACGTCTTCTGTGCTTTCTCTGCGCAGGGCTCTTaGATGGCGCTCACCACGTCA +
Preference number: 4 (lower is better)
Translates to: TLRRALGWRSPRHVFCAFSAQGS*MALTTS
Trigger: TGACGTGGTGAGCGCCATCCAAGAGCCCTGCGCAGA...GAAAGCACAGAAGACGTGACGTGGTGAGCGCCATCCAAGAGCCCTGCGCAGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378543.2
ENST00000440825.6
CDS-3UTR CCA 90 bp GCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAGCAGAACCACGACGGTGTCTTTTaGAAGTGGTTCTCGAAAACT +
Preference number: 4 (lower is better)
Translates to: ACAETAEGSVSGRCWEQNHDGVF*KWFSKT
Trigger: AGTTTTCGAGAACCACTTCCAAAAGACACCGTCGTG...GTTCTGCTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp CGGGCAGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGCACGACGGTGTCTTTTaGAAGTGGTTCTCGAAAACT +
Preference number: 4 (lower is better)
Translates to: RAGQLRAGGTCCCACVAAHDGVF*KWFSKT
Trigger: AGTTTTCGAGAACCACTTCCAAAAGACACCGTCGTG...CGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp GCTAGCCTGCCCATGCGGTGGCCACAGCCTCGGGTGAGTTCCGGTTCCAAAGTAGTTGGCTGCCAACTTTaGACTCCGGTGCCTTCGCAT +
Preference number: 4 (lower is better)
Translates to: ASLPMRWPQPRVSSGSKVVGCQL*TPVPSH
Trigger: ATGCGAAGGCACCGGAGTCCAAAGTTGGCAGCCAAC...TACTTTGGAACCGGAACTCACCCGAGGCTGTGGCCACCGCATGGGCAGGCTAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420515.1
CDS-3UTR CCA 90 bp CAGGTGGCTGTCAACATCCAGCTGGGTCAGCTCTGTCACCCAGGCTGGAGTGCACTGGTCTCAAACTCCTaGGCTCCAGCAACCCACCTG +
Preference number: 4 (lower is better)
Translates to: QVAVNIQLGQLCHPGWSALVSNS*APATHL
Trigger: CAGGTGGGTTGCTGGAGCCCAGGAGTTTGAGACCAG...TGCACTCCAGCCTGGGTGACAGAGCTGACCCAGCTGGATGTTGACAGCCACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440825.6
CDS-3UTR CCA 90 bp AGACCAAGTCCGGCTGTTAGACCAGACCCTCCAATCCAGGCGGCCTCCCTGCTGCTTCAGCCAAGAGCATaGATTTCTCCCCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: RPSPAVRPDPPIQAASLLLQPRA*ISPQGS
Trigger: GGAGCCCTGGGGAGAAATCCATGCTCTTGGCTGAAG...CAGCAGGGAGGCCGCCTGGATTGGAGGGTCTGGTCTAACAGCCGGACTTGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420515.1
3UTR CAA 72 bp AGTCCCACCCGCCTGGTGTCATCTCTCCAGTGGGCGTaGGGGGAGGATTCTTATGCGAACGTGACTCCGCTT +
Preference number: 4 (lower is better)
Translates to: SPTRLVSSLQWA*GEDSYANVTPL
Trigger: AAGCGGAGTCACGTTCGCATAAGAATCCTCCCCCAACGCCCACTGGAGAGATGACACCAGGCGGGTGGGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp ATCACAACACAGAGACAGACAGGAGCCCGCCCTGCTTTAATGCGCATGCGGGGGTCTTGGGTCCGACAGTaGAGACTTCAGTGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: ITTQRQTGARPALMRMRGSWVRQ*RLQWAP
Trigger: CGGAGCCCACTGAAGTCTTCACTGTCGGACCCAAGA...CCCCCGCATGCGCATTAAAGCAGGGCGGGCTCCTGTCTGTCTCTGTGTTGTGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378543.2
ENST00000378546.9
CDS-3UTR TCA 90 bp TCACACCTGGGCCCGGGCAGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCGAGCGTGTAGCGTCCTaGGGAATAAAATGTTCCGAT +
Preference number: 4 (lower is better)
Translates to: SHLGPGRPASCWRNLLLCERVAS*GIKCSD
Trigger: ATCGGAACATTTTATTCCTCAGGACGCTACACGCTC...GCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCCCGGGCCCAGGTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400918.7
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp AACACTCAATCTGGTAGGGATGATGCCCGCGCGGAGCTGACCCTTCTCCTATTGGCTCCGCCAGGAAAGTaGGCGTGTAGCGTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: NTQSGRDDARAELTLLLLAPPGK*ACSVLR
Trigger: CCTCAGGACGCTACACGCTCACTTTCCTGGCGGAGC...CAATAGGAGAAGGGTCAGCTCCGCGCGGGCATCATCCCTACCAGATTGAGTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp TATTGCTGTCCACCGAGGAGTCGGTGTGAGGCCGCGTGCGTCTCTGTCGTGGACCGGTCTGGACAACTTTaGCACACAGTTCACCAGCGA +
Preference number: 4 (lower is better)
Translates to: YCCPPRSRCEAACVSVVDRSGQL*HTVHQR
Trigger: TCGCTGGTGAACTGTGTGTCAAAGTTGTCCAGACCG...GTCCACGACAGAGACGCACGCGGCCTCACACCGACTCCTCGGTGGACAGCAATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp CCGAGGGGGCTGTCATGCGGTTTCCAAGGTGCACATTTTCCACGGAAACAGAACGGTGGGGGCGGGAGTTaGAGTACCCCTCAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: PRGLSCGFQGAHFPRKQNGGGGS*STPQVK
Trigger: CTTCACCTGAGGGGTACTTCAACTCCCGCCCCCACC...GTTCTGTTTCCGTGGAAAATGTGCACCTTGGAAACCGCATGACAGCCCCCTCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp CTGACAGCAACAAGGATCTCAGAGCTTCAGCCAAGAGCATGGATTTCTCCCCAGTCCACAGACGGCTGCTaGTCCACCCTGGGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: LTATRISELQPRAWISPQSTDGC*STLGAL
Trigger: CAGGGCCCCCAGGGTGGAGCAGCAGCCGTCTGTGGA...CTGGGGAGAAATCCATGCTCTTGGCTGAAGCTCTGAGATCCTTGTTGCTGTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420515.1
CDS-3UTR GCA 90 bp CGTGCCGGTTACCAGTTTGGCCGTTCTTGTACACAATATGTGAGTAATGCTGTGGGCACATGGGGCAGCTaGGCAGGGCCGCGGCACCCT +
Preference number: 4 (lower is better)
Translates to: RAGYQFGRSCTQYVSNAVGTWGS*AGPRHP
Trigger: AGGGTGCCGCGGCCCTGCGCAGCTGCCCCATGTGCC...CACAGCATTACTCACATATTGTGTACAAGAACGGCCAAACTGGTAACCGGCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp GTCCCACCCGCCTGGTGTCATCTCTCCAGTGGGCGTTGGGGGAGGATTCTTATGACGTCACGTCTTCTGTaGTTTCGGCCAAGCACTGGG +
Preference number: 4 (lower is better)
Translates to: VPPAWCHLSSGRWGRILMTSRLL*FRPSTG
Trigger: CCCAGTGCTTGGCCGAAAGCACAGAAGACGTGACGT...CATAAGAATCCTCCCCCAACGCCCACTGGAGAGATGACACCAGGCGGGTGGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp CCAAGCTGGAGAAGAAGCAGGCGCTCCCTCCATTCCAGCCACAGATCACAGACGCTCGATGCACTGACCTaGTCCGCCAGGAAAGTGAGC +
Preference number: 4 (lower is better)
Translates to: PSWRRSRRSLHSSHRSQTLDALT*SARKVS
Trigger: GCTCACTTTCCTGGCGGAGCAGGTCAGTGCATCGAG...CGTCTGTGATCTGTGGCTGGAATGGAGGGAGCGCCTGCTTCTTCTCCAGCTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp AGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGATGCGGTTTCCAAGGTaGACATTTTCCACGGAAACA +
Preference number: 4 (lower is better)
Translates to: SFVLEELAAVPASRRIRGMRFPR*TFSTET
Trigger: TGTTTCCGTGGAAAATGTGCACCTTGGAAACCGCAT...CCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400918.7
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp TTTCCAAGCTGGAGAAGAAGCAGGCGCTCCCTCCATTCCAGCCACAGATCACAGAGGAACTTGCTGCTGTaGCTGCGTCGCGGCGGATCC +
Preference number: 4 (lower is better)
Translates to: FPSWRRSRRSLHSSHRSQRNLLL*LRRGGS
Trigger: GGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCT...CTGTGATCTGTGGCTGGAATGGAGGGAGCGCCTGCTTCTTCTCCAGCTTGGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp TTTTCCACGGAAACAGAACTCGATGCACTGACCTGCTCCGCCAGGAAAGTGAGCAGCGTCAGCGGGCGCTaGTGGGAGCAGAACAGTCCC +
Preference number: 4 (lower is better)
Translates to: FSTETELDALTCSARKVSSVSGR*WEQNSP
Trigger: GGGACTGTTCTGCTCCCAGCAGCGCCCGCTGACGCT...GCTCACTTTCCTGGCGGAGCAGGTCAGTGCATCGAGTTCTGTTTCCGTGGAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp AGTGAGGCCTGGTGCACAGGTGTGGAAATTGCCACGCAGCCCTCTTGGCCAGGCCTGGTGGCTAAATACTaGCGTGTTGCCAGTAGCGTG +
Preference number: 4 (lower is better)
Translates to: SEAWCTGVEIATQPSWPGLVAKY*RVASSV
Trigger: CACGCTACTGGCAACACGGCAGTATTTAGCCACCAG...GCCTGGCCAAGAGGGCTGCGTGGCAATTTCCACACCTGTGCACCAGGCCTCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp GTCTTCTGTGCTTTCGGCCAAGCACTGGGCCAGGTGGCTGTCAACATCCAGCTGCACAGGTGTGGAAATTaGCACGCAGCCCTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: VFCAFGQALGQVAVNIQLHRCGN*HAALLA
Trigger: GGCCAAGAGGGCTGCGTGGCAATTTCCACACCTGTG...CAGCTGGATGTTGACAGCCACCTGGCCCAGTGCTTGGCCGAAAGCACAGAAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428120.5
CDS-3UTR GCA 90 bp GAGGGGGCTGTCATGCGGTTTCCAAGGTGCACATTTTCCACGGAAACAGAACTCGGCAGGGCTGCCAGCTaGCAGGTGTCAGGTGTGGCA +
Preference number: 4 (lower is better)
Translates to: EGAVMRFPRCTFSTETELGRAAS*QVSGVA
Trigger: TGCCACACCTGACACCTGGCAGCTGGCAGCCCTGCC...GAGTTCTGTTTCCGTGGAAAATGTGCACCTTGGAAACCGCATGACAGCCCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp CCACCCGCCTGGTGTCATCTCTCCAGTGGGCGTTGGGGGAGGATTCTTATGCGAAACTTTGGACTCCGGTaGCTTCGCATTCCCGAGCTG +
Preference number: 4 (lower is better)
Translates to: PPAWCHLSSGRWGRILMRNFGLR*LRIPEL
Trigger: CAGCTCGGGAATGCGAAGGCACCGGAGTCCAAAGTT...TCGCATAAGAATCCTCCCCCAACGCCCACTGGAGAGATGACACCAGGCGGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428120.5
CDS-3UTR CCA 90 bp GGATTCTTATGCGAACGTGACTCCGCTTCCCCCAAGGGAATGAACACACGGTCAACTCCTTCTGGCACATaGGGCAGCTGCGCAGGGCCG +
Preference number: 4 (lower is better)
Translates to: GFLCERDSASPKGMNTRSTPSGT*GSCAGP
Trigger: CGGCCCTGCGCAGCTGCCCCATGTGCCAGAAGGAGT...TGACCGTGTGTTCATTCCCTTGGGGGAAGCGGAGTCACGTTCGCATAAGAATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp TTTCATCACAACACAGAGACAGACAGGAGCCCGCCCTGCTTTAATGCGCATGCGGGGGCGAACTCCTTCTaGCACATGGGGCAGCTGCGC +
Preference number: 4 (lower is better)
Translates to: FHHNTETDRSPPCFNAHAGANSF*HMGQLR
Trigger: GCGCAGCTGCCCCATGTGCCAGAAGGAGTTCGCCCC...CGCATGCGCATTAAAGCAGGGCGGGCTCCTGTCTGTCTCTGTGTTGTGATGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378543.2
ENST00000378546.9
CDS-3UTR CCA 90 bp TCATCTCTCCAGTGGGCGTTGGGGGAGGATTCTTATGCGAACGTGACTCCGCTTCCAGCGGGACACAGGTaGGGGCGGGAGTTGAAGTAC +
Preference number: 4 (lower is better)
Translates to: SSLQWALGEDSYANVTPLPAGHR*GRELKY
Trigger: GTACTTCAACTCCCGCCCCCACCTGTGTCCCGCTGG...AAGCGGAGTCACGTTCGCATAAGAATCCTCCCCCAACGCCCACTGGAGAGATGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp TGGGCGTTGGGGGAGGATTCTTATGCGAACGTGACTCCGCTTCCCCCAAGGGAAAGGCCAGCTTCGTGCTaGAGGAACTTGCTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: WALGEDSYANVTPLPPRERPASC*RNLLLC
Trigger: GCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCT...TTCCCTTGGGGGAAGCGGAGTCACGTTCGCATAAGAATCCTCCCCCAACGCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp TCACACCTGGGCCCGGGCAGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCATTGTTTTTCCAAGCTaGAGAAGAAGCAGGCGCTCC +
Preference number: 4 (lower is better)
Translates to: SHLGPGRPASCWRNLLLCIVFPS*RRSRRS
Trigger: GGAGCGCCTGCTTCTTCTCCAGCTTGGAAAAACAAT...GCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCCCGGGCCCAGGTGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp GGATCCGCGGGGACCCTGCCGAGGGGGCTGTCATGCGGTTTCCAAGGTGCACATATTGTTTTTCCAAGCTaGAGAAGAAGCAGGCGCTCC +
Preference number: 4 (lower is better)
Translates to: GSAGTLPRGLSCGFQGAHIVFPS*RRSRRS
Trigger: GGAGCGCCTGCTTCTTCTCCAGCTTGGAAAAACAAT...ATGTGCACCTTGGAAACCGCATGACAGCCCCCTCGGCAGGGTCCCCGCGGATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp CCAAGCTGGAGAAGAAGCAGGCGCTCCCTCCATTCCAGCCACAGATCACAGACGCCTGGTGCACAGGTGTaGAAATTGCCACGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: PSWRRSRRSLHSSHRSQTPGAQV*KLPRSP
Trigger: AGGGCTGCGTGGCAATTTCCACACCTGTGCACCAGG...CGTCTGTGATCTGTGGCTGGAATGGAGGGAGCGCCTGCTTCTTCTCCAGCTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp GCTAGCCTGCCCATGCGGTGGCCACAGCCTCGGGTGAGTTCCGGTTCCAAAGTAAGCTGTTTTTGCTTCTaGGGGCGAACTCCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: ASLPMRWPQPRVSSGSKVSCFCF*GRTPSG
Trigger: GCCAGAAGGAGTTCGCCCCCAGAAGCAAAAACAGCT...TACTTTGGAACCGGAACTCACCCGAGGCTGTGGCCACCGCATGGGCAGGCTAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420515.1
CDS-3UTR CCA 90 bp GCAGGGCTCTTGGATGGCGCTCACCACGTCACGTCTTCTGTGCTTTCGGCCAAGGTTGGCTGCCAACTTTaGACTCCGGTGCCTTCGCAT +
Preference number: 4 (lower is better)
Translates to: AGLLDGAHHVTSSVLSAKVGCQL*TPVPSH
Trigger: ATGCGAAGGCACCGGAGTCCAAAGTTGGCAGCCAAC...CTTGGCCGAAAGCACAGAAGACGTGACGTGGTGAGCGCCATCCAAGAGCCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440825.6
CDS-3UTR TCA 90 bp GCCCGCGCGGAGCTGACCCTTCTCCTATTGTTTTTCCAAGCTGGAGAAGAAGCAAGTGAAGGCACCTCGTaGTCCAGGATCAGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: ARAELTLLLLFFQAGEEASEGTS*SRISSG
Trigger: CCCGGAGCTGATCCTGGATCACGAGGTGCCTTCACT...TGCTTCTTCTCCAGCTTGGAAAAACAATAGGAGAAGGGTCAGCTCCGCGCGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp CAGCCACAGATCACAGACGACTACGGTCTGGACAACTTTGACACACAGTTCACCACCGAGGAGTCGGTGTaGGGCCGCGTGCGTCTCTGT +
Preference number: 4 (lower is better)
Translates to: QPQITDDYGLDNFDTQFTTEESV*GRVRLC
Trigger: ACAGAGACGCACGCGGCCTCACACCGACTCCTCGGT...GGTGAACTGTGTGTCAAAGTTGTCCAGACCGTAGTCGTCTGTGATCTGTGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp GGATTCTTATGCGAACGTGACTCCGCTTCCCCCAAGGGAATGAACACACGGTCAGCTGACCCCAGACGATaGGTGAGTCCCACTGGGTGC +
Preference number: 4 (lower is better)
Translates to: GFLCERDSASPKGMNTRSADPRR*VSPTGC
Trigger: GCACCCAGTGGGACTCACTCATCGTCTGGGGTCAGC...TGACCGTGTGTTCATTCCCTTGGGGGAAGCGGAGTCACGTTCGCATAAGAATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp TTTCCAAGCTGGAGAAGAAGCAGGCGCTCCCTCCATTCCAGCCACAGATCACAGCGGCTCTCCTGTGGATaGCACTCACCCTTGACTGCC +
Preference number: 4 (lower is better)
Translates to: FPSWRRSRRSLHSSHRSQRLSCG*HSPLTA
Trigger: GGCAGTCAAGGGTGAGTGTCATCCACAGGAGAGCCG...CTGTGATCTGTGGCTGGAATGGAGGGAGCGCCTGCTTCTTCTCCAGCTTGGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp GGATTCTTATGCGAACGTGACTCCGCTTCCCCCAAGGGAATGAACACACGGTCATTCCAGGTGCCCTCCTaGCCCGTGAAGCAGCCGGTA +
Preference number: 4 (lower is better)
Translates to: GFLCERDSASPKGMNTRSFQVPS*PVKQPV
Trigger: TACCGGCTGCTTCACGGGGCAGGAGGGCACCTGGAA...TGACCGTGTGTTCATTCCCTTGGGGGAAGCGGAGTCACGTTCGCATAAGAATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp CGCAGGGCTCTTGGATGGCGCTCACCACGTCACGTCTTCTGTGCTTTCGGCCAATTCCCGAGCTGTTTTTaGTTCTGGGGGCGAACTCCT +
Preference number: 4 (lower is better)
Translates to: RRALGWRSPRHVFCAFGQFPSCF*FWGRTP
Trigger: AGGAGTTCGCCCCCAGAAGCAAAAACAGCTCGGGAA...TTGGCCGAAAGCACAGAAGACGTGACGTGGTGAGCGCCATCCAAGAGCCCTGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000440825.6
CDS-3UTR GCA 90 bp GCCTGTGCGGGACAGGGCGACGGTTCAAGACCAAGTCCGGCTGTTAGACCAGACGTTGTTGTTGTTGGCTaGCAACTTTGGACTCCGGTG +
Preference number: 4 (lower is better)
Translates to: ACAGQGDGSRPSPAVRPDVVVVG*QLWTPV
Trigger: CACCGGAGTCCAAAGTTGGCAGCCAACAACAACAAC...GTCTGGTCTAACAGCCGGACTTGGTCTTGAACCGTCGCCCTGTCCCGCACAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420515.1
CDS-3UTR GCA 90 bp AGCCTGCCCATGCGGTGGCCACAGCCTCGGGTGAGTTCCGGTTCCAAAGTACCGGCTGGAGTGCAGTGGTaGAATCATACTTCACTACAG +
Preference number: 4 (lower is better)
Translates to: SLPMRWPQPRVSSGSKVPAGVQW*NHTSLQ
Trigger: CTGTAGTGAAGTATGATTGCACCACTGCACTCCAGC...CGGTACTTTGGAACCGGAACTCACCCGAGGCTGTGGCCACCGCATGGGCAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420515.1
CDS-3UTR GCA 90 bp TGCAATCATACTTCACTACAGCCTCCAATTCCTGGCTCAAGGGAATCCTCCCACGTCCCCCAGCTAGCCTaGCCATGCGGTGGCCACAGC +
Preference number: 4 (lower is better)
Translates to: CNHTSLQPPIPGSRESSHVPQLA*PCGGHS
Trigger: GCTGTGGCCACCGCATGGGCAGGCTAGCTGGGGGAC...GTGGGAGGATTCCCTTGAGCCAGGAATTGGAGGCTGTAGTGAAGTATGATTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420515.1
CDS-3UTR CCA 90 bp CACATTTTCCACGGAAACAGAACTCGATGCACTGACCTGCTCCGCCAGGAAAGTACTCCTTCTGGCACATaGGGCAGCTGCGCAGGGCCG +
Preference number: 4 (lower is better)
Translates to: HIFHGNRTRCTDLLRQESTPSGT*GSCAGP
Trigger: CGGCCCTGCGCAGCTGCCCCATGTGCCAGAAGGAGT...ACTTTCCTGGCGGAGCAGGTCAGTGCATCGAGTTCTGTTTCCGTGGAAAATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400918.7
ENST00000414253.5
ENST00000428120.5
3UTR CAA 72 bp ACCCCATTGTGCGGCTGGTGGCTAAATACTGCCGTGTaGCCAGTAGCGTGCCGGTTACCAGTTTGGCCGTTC +
Preference number: 4 (lower is better)
Translates to: TPLCGWWLNTAV*PVACRLPVWPF
Trigger: GAACGGCCAAACTGGTAACCGGCACGCTACTGGCAACACGGCAGTATTTAGCCACCAGCCGCACAATGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp TATTGCTGTCCACCGAGGAGTCGGTGTGAGGCCGCGTGCGTCTCTGTCGTGGACGAGCGTGTAGCGTCCTaGGGAATAAAATGTTCCGAT +
Preference number: 4 (lower is better)
Translates to: YCCPPRSRCEAACVSVVDERVAS*GIKCSD
Trigger: ATCGGAACATTTTATTCCTCAGGACGCTACACGCTC...GTCCACGACAGAGACGCACGCGGCCTCACACCGACTCCTCGGTGGACAGCAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp CGTCTTCTGTGCTTTCGGCCAAGCACTGGGCCAGGTGGCTGTCAACATCCAGCTCGGTCTGGACAACTTTaGCACACAGTTCACCAGCGA +
Preference number: 4 (lower is better)
Translates to: RLLCFRPSTGPGGCQHPARSGQL*HTVHQR
Trigger: TCGCTGGTGAACTGTGTGTCAAAGTTGTCCAGACCG...AGCTGGATGTTGACAGCCACCTGGCCCAGTGCTTGGCCGAAAGCACAGAAGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428120.5
CDS-3UTR TCA 90 bp TGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAGCAGAACAGTCACTGTTTCATTTTGTaGTTGAAGTGCGTGCAAAAC +
Preference number: 4 (lower is better)
Translates to: CAETAEGSVSGRCWEQNSHCFIL*LKCVQN
Trigger: GTTTTGCACGCACTTCAATCACAAAATGAAACAGTG...ACTGTTCTGCTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp GCTGGGAGCAGAACAGTCCCTCACACCTGGGCCCGGGCAGGCCAGCTTCGTGCTCACTGTTTCATTTTGTaGTTGAAGTGCGTGCAAAAC +
Preference number: 4 (lower is better)
Translates to: AGSRTVPHTWARAGQLRAHCFIL*LKCVQN
Trigger: GTTTTGCACGCACTTCAATCACAAAATGAAACAGTG...AGCACGAAGCTGGCCTGCCCGGGCCCAGGTGTGAGGGACTGTTCTGCTCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp AACAGAACTCGATGCACTGACCTGCTCCGCCAGGAAAGTGAGCGTGTAGCGTCCTCTCGAAAACTCTGGTaGCTTGGGGGCTGCACAGTG +
Preference number: 4 (lower is better)
Translates to: NRTRCTDLLRQESERVASSRKLW*LGGCTV
Trigger: CACTGTGCAGCCCCCAAGTCACCAGAGTTTTCGAGA...GGACGCTACACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCATCGAGTTCTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp AATGGCTCCGGTCACGACGGTGTCTTTTGGAAGTGGTTCTCGAAAACTCTGGTGGGTGGGGGCGGGAGTTaGAGTACCCCTCAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: NGSGHDGVFWKWFSKTLVGGGGS*STPQVK
Trigger: CTTCACCTGAGGGGTACTTCAACTCCCGCCCCCACC...CACCAGAGTTTTCGAGAACCACTTCCAAAAGACACCGTCGTGACCGGAGCCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp CACATTTTCCACGGAAACAGAACTCGATGCACTGACCTGCTCCGCCAGGAAAGTTTCCAGGTGCCCTCCTaGCCCGTGAAGCAGCCGGTA +
Preference number: 4 (lower is better)
Translates to: HIFHGNRTRCTDLLRQESFQVPS*PVKQPV
Trigger: TACCGGCTGCTTCACGGGGCAGGAGGGCACCTGGAA...ACTTTCCTGGCGGAGCAGGTCAGTGCATCGAGTTCTGTTTCCGTGGAAAATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400918.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp TTTGCCCACAGGGATGCCATAAAGAGGATCGACCAGTCAGAGTTCGAAGGCTTTAGCGTCAGCGGGCGCTaGTGGGAGCAGAACAGTCCC +
Preference number: 4 (lower is better)
Translates to: FAHRDAIKRIDQSEFEGFSVSGR*WEQNSP
Trigger: GGGACTGTTCTGCTCCCAGCAGCGCCCGCTGACGCT...AAAGCCTTCGAACTCTGACTGGTCGATCCTCTTTATGGCATCCCTGTGGGCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp TTTGCCCACAGGGATGCCATAAAGAGGATCGACCAGTCAGAGTTCGAAGGCTTTCCAGGGACAGACGCTTaGGCCGAGACCGCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: FAHRDAIKRIDQSEFEGFPGTDA*AETAEG
Trigger: TCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCCCTGG...AAAGCCTTCGAACTCTGACTGGTCGATCCTCTTTATGGCATCCCTGTGGGCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp AACACTCAATCTGGTAGGGATGATGCCCGCGCGGAGCTGACCCTTCTCCTATTGGTGTTGCCAGTAGCGTaGCGGTTACCAGTTTGGCCG +
Preference number: 4 (lower is better)
Translates to: NTQSGRDDARAELTLLLLVLPVA*RLPVWP
Trigger: CGGCCAAACTGGTAACCGGCACGCTACTGGCAACAC...CAATAGGAGAAGGGTCAGCTCCGCGCGGGCATCATCCCTACCAGATTGAGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp TCCCCAGGGCTCCCAACAGTACCCTCTGTCCGTGATTCAGGGTCTTACTCTGTCAACTTTGGACTCCGGTaGCTTCGCATTCCCGAGCTG +
Preference number: 4 (lower is better)
Translates to: SPGLPTVPSVRDSGSYSVNFGLR*LRIPEL
Trigger: CAGCTCGGGAATGCGAAGGCACCGGAGTCCAAAGTT...GACAGAGTAAGACCCTGAATCACGGACAGAGGGTACTGTTGGGAGCCCTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420515.1
CDS-3UTR CCA 90 bp AACACTCAATCTGGTAGGGATGATGCCCGCGCGGAGCTGACCCTTCTCCTATTGAAGCACTGGGCCAGGTaGCTGTCAACATCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: NTQSGRDDARAELTLLLLKHWAR*LSTSSW
Trigger: CCAGCTGGATGTTGACAGCCACCTGGCCCAGTGCTT...CAATAGGAGAAGGGTCAGCTCCGCGCGGGCATCATCCCTACCAGATTGAGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp CACATTTTCCACGGAAACAGAACTCGATGCACTGACCTGCTCCGCCAGGAAAGTCCAGCGGGACACAGGTaGGGGCGGGAGTTGAAGTAC +
Preference number: 4 (lower is better)
Translates to: HIFHGNRTRCTDLLRQESPAGHR*GRELKY
Trigger: GTACTTCAACTCCCGCCCCCACCTGTGTCCCGCTGG...ACTTTCCTGGCGGAGCAGGTCAGTGCATCGAGTTCTGTTTCCGTGGAAAATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400918.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp CAGCCACAGATCACAGACGACTACGGTCTGGACAACTTTGACACACAGTTCACCGTCAGCGGGCGCTGCTaGGAGCAGAACAGTCCCTCA +
Preference number: 4 (lower is better)
Translates to: QPQITDDYGLDNFDTQFTVSGRC*EQNSPS
Trigger: TGAGGGACTGTTCTGCTCCCAGCAGCGCCCGCTGAC...GGTGAACTGTGTGTCAAAGTTGTCCAGACCGTAGTCGTCTGTGATCTGTGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp ACCACAGGCACGCGCCACCACGCCCAGGCATGTAAAGATGGGATCTTGCCATGTAGCTGTTTTTGCTTCTaGGGGCGAACTCCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: TTGTRHHAQACKDGILPCSCFCF*GRTPSG
Trigger: GCCAGAAGGAGTTCGCCCCCAGAAGCAAAAACAGCT...ACATGGCAAGATCCCATCTTTACATGCCTGGGCGTGGTGGCGCGTGCCTGTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420515.1
ENST00000440825.6
CDS-3UTR CCA 90 bp ATGGATTTCTCCCCAGGGCTCCCAACAGTACCCTCTGTCCGTGATTCAGGGTCTCAGGGCATCCCAGGGTaGCTGTGCAAACCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: MDFSPGLPTVPSVRDSGSQGIPG*LCKPLF
Trigger: GAACAAGGGTTTGCACAGCCACCCTGGGATGCCCTG...AGACCCTGAATCACGGACAGAGGGTACTGTTGGGAGCCCTGGGGAGAAATCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420515.1
CDS-3UTR TCA 90 bp TTTTCCACGGAAACAGAACTCGATGCACTGACCTGCTCCGCCAGGAAAGTGAGCTCTTGGGTCCGACAGTaGAGACTTCAGTGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: FSTETELDALTCSARKVSSWVRQ*RLQWAP
Trigger: CGGAGCCCACTGAAGTCTTCACTGTCGGACCCAAGA...GCTCACTTTCCTGGCGGAGCAGGTCAGTGCATCGAGTTCTGTTTCCGTGGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400918.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp GGATTCTTATGCGAACGTGACTCCGCTTCCCCCAAGGGAATGAACACACGGTCACAGAACTCGATGCACTaGCCTGCTCCGCCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: GFLCERDSASPKGMNTRSQNSMH*PAPPGK
Trigger: CTTTCCTGGCGGAGCAGGTCAGTGCATCGAGTTCTG...TGACCGTGTGTTCATTCCCTTGGGGGAAGCGGAGTCACGTTCGCATAAGAATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp CAGCCACAGATCACAGACGACTACGGTCTGGACAACTTTGACACACAGTTCACCACAGCTGTCCAGAGCTaGGGCTTCCTAGAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: QPQITDDYGLDNFDTQFTTAVQS*GFLEAG
Trigger: CCCTGCCTCTAGGAAGCCTCAGCTCTGGACAGCTGT...GGTGAACTGTGTGTCAAAGTTGTCCAGACCGTAGTCGTCTGTGATCTGTGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp CGCGGAGCTGACCCTTCTCCTATTGTTTTTCCAAGCTGGAGAAGAAGCAGGCGCGGAAACAGAACTCGATaGACTGACCTGCTCCGCCAG +
Preference number: 4 (lower is better)
Translates to: RGADPSPIVFPSWRRSRRGNRTR*TDLLRQ
Trigger: CTGGCGGAGCAGGTCAGTGCATCGAGTTCTGTTTCC...GCGCCTGCTTCTTCTCCAGCTTGGAAAAACAATAGGAGAAGGGTCAGCTCCGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp CAGTGGGCGTTGGGGGAGGATTCTTATGCGAACGTGACTCCGCTTCCCCCAAGGATATCAACCCATTATTaGTGTCCACCGAGGAGTCGG +
Preference number: 4 (lower is better)
Translates to: QWALGEDSYANVTPLPPRISTHY*CPPRSR
Trigger: CCGACTCCTCGGTGGACAGCAATAATGGGTTGATAT...CCTTGGGGGAAGCGGAGTCACGTTCGCATAAGAATCCTCCCCCAACGCCCACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp CCACCCGCCTGGTGTCATCTCTCCAGTGGGCGTTGGGGGAGGATTCTTATGCGAACACTCACCCTTGACTaGCAGGGTCATTCAAAGTCT +
Preference number: 4 (lower is better)
Translates to: PPAWCHLSSGRWGRILMRTLTLD*QGHSKS
Trigger: AGACTTTGAATGACCCTGGCAGTCAAGGGTGAGTGT...TCGCATAAGAATCCTCCCCCAACGCCCACTGGAGAGATGACACCAGGCGGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp TCATCTCTCCAGTGGGCGTTGGGGGAGGATTCTTATGCGAACGTGACTCCGCTTCGCTCCACCCCATTGTaGGGCTGGTGGCTAAATACT +
Preference number: 4 (lower is better)
Translates to: SSLQWALGEDSYANVTPLRSTPL*GWWLNT
Trigger: AGTATTTAGCCACCAGCCGCACAATGGGGTGGAGCG...AAGCGGAGTCACGTTCGCATAAGAATCCTCCCCCAACGCCCACTGGAGAGATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp TTTCATCACAACACAGAGACAGACAGGAGCCCGCCCTGCTTTAATGCGCATGCGCTTTCGGCCAAGCACTaGGCCAGGTGGCTGTCAACA +
Preference number: 4 (lower is better)
Translates to: FHHNTETDRSPPCFNAHALSAKH*ARWLST
Trigger: TGTTGACAGCCACCTGGCCCAGTGCTTGGCCGAAAG...CGCATGCGCATTAAAGCAGGGCGGGCTCCTGTCTGTCTCTGTGTTGTGATGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378543.2
ENST00000378546.9
CDS-3UTR TCA 90 bp GGCACGCGCCACCACGCCCAGGCATGTAAAGATGGGATCTTGCCATGTTGCCCAGCAAGTTTTTCCTCGTaGACGTCCTTGTCTTCAGAA +
Preference number: 4 (lower is better)
Translates to: GTRHHAQACKDGILPCCPASFSS*TSLSSE
Trigger: TTCTGAAGACAAGGACGTTCACGAGGAAAAACTTGC...TGGGCAACATGGCAAGATCCCATCTTTACATGCCTGGGCGTGGTGGCGCGTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420515.1
CDS-3UTR TCA 90 bp GCCTGTGCGGGACAGGGCGACGGTTCAAGACCAAGTCCGGCTGTTAGACCAGACCTACTTAGGAAAAATTaGGGCAGTCTGCCAAGCTTT +
Preference number: 4 (lower is better)
Translates to: ACAGQGDGSRPSPAVRPDLLRKN*GSLPSF
Trigger: AAAGCTTGGCAGACTGCCTCAATTTTTCCTAAGTAG...GTCTGGTCTAACAGCCGGACTTGGTCTTGAACCGTCGCCCTGTCCCGCACAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420515.1
CDS-3UTR GCA 90 bp TTCCAGCCACAGATCACAGACGACTACGGTCTGGACAACTTTGACACACAGTTCGGCAGGCCAGCTTCGTaGTGGAGGAACTTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: FQPQITDDYGLDNFDTQFGRPAS*WRNLLL
Trigger: CAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCC...GAACTGTGTGTCAAAGTTGTCCAGACCGTAGTCGTCTGTGATCTGTGGCTGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp TCAACCCATTATTGCTGTCCACCGAGGAGTCGGTGTGAGGCCGCGTGCGTCTCTATATCAACCCATTATTaGTGTCCACCGAGGAGTCGG +
Preference number: 4 (lower is better)
Translates to: STHYCCPPRSRCEAACVSISTHY*CPPRSR
Trigger: CCGACTCCTCGGTGGACAGCAATAATGGGTTGATAT...AGAGACGCACGCGGCCTCACACCGACTCCTCGGTGGACAGCAATAATGGGTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp AACAGAACTCGATGCACTGACCTGCTCCGCCAGGAAAGTGAGCGTGTAGCGTCCGTTGTTGTTGTTGGCTaGCAACTTTGGACTCCGGTG +
Preference number: 4 (lower is better)
Translates to: NRTRCTDLLRQESERVASVVVVG*QLWTPV
Trigger: CACCGGAGTCCAAAGTTGGCAGCCAACAACAACAAC...GGACGCTACACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCATCGAGTTCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428120.5
CDS-3UTR CCA 90 bp CAATCTGGTAGGGATGATGCCCGCGCGGAGCTGACCCTTCTCCTATTGTTTTTCCTCTCCAGTGGGCGTTaGGGGAGGATTCTTATGCGA +
Preference number: 4 (lower is better)
Translates to: QSGRDDARAELTLLLLFFLSSGR*GRILMR
Trigger: TCGCATAAGAATCCTCCCCCAACGCCCACTGGAGAG...GAAAAACAATAGGAGAAGGGTCAGCTCCGCGCGGGCATCATCCCTACCAGATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp CTTCTCCTATTGTTTTTCCAAGCTGGAGAAGAAGCAGGCGCTCCCTCCATTCCAATGAGTGAGTCCCACTaGGTGCGGGTCCCTGGAGCA +
Preference number: 4 (lower is better)
Translates to: LLLLFFQAGEEAGAPSIPMSESH*VRVPGA
Trigger: TGCTCCAGGGACCCGCACCCAGTGGGACTCACTCAT...TGGAATGGAGGGAGCGCCTGCTTCTTCTCCAGCTTGGAAAAACAATAGGAGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp TCTGTGCTTTCGGCCAAGCACTGGGCCAGGTGGCTGTCAACATCCAGCTGGGTCTGTTGTTGTTGTTGTTaGCTGCCAACTTTGGACTCC +
Preference number: 4 (lower is better)
Translates to: SVLSAKHWARWLSTSSWVCCCCC*LPTLDS
Trigger: GGAGTCCAAAGTTGGCAGCCAACAACAACAACAACA...GACCCAGCTGGATGTTGACAGCCACCTGGCCCAGTGCTTGGCCGAAAGCACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428120.5
ENST00000440825.6
CDS-3UTR TCA 90 bp CGTGCCGGTTACCAGTTTGGCCGTTCTTGTACACAATATGTGAGTAATGCTGTGAGTGAAGGCACCTCGTaGTCCAGGATCAGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: RAGYQFGRSCTQYVSNAVSEGTS*SRISSG
Trigger: CCCGGAGCTGATCCTGGATCACGAGGTGCCTTCACT...CACAGCATTACTCACATATTGTGTACAAGAACGGCCAAACTGGTAACCGGCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp ATCCGCGGGGACCCTGCCGAGGGGGCTGTCATGCGGTTTCCAAGGTGCACATTTTGGTTTGAAAAATCCTaGTATTTGCTAATGGCTCCG +
Preference number: 4 (lower is better)
Translates to: IRGDPAEGAVMRFPRCTFWFEKS*YLLMAP
Trigger: CGGAGCCATTAGCAAATATCAGGATTTTTCAAACCA...AAATGTGCACCTTGGAAACCGCATGACAGCCCCCTCGGCAGGGTCCCCGCGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp ATCCGCGGGGACCCTGCCGAGGGGGCTGTCATGCGGTTTCCAAGGTGCACATTTCTTGTACACAATATGTaGGTAATGCTGTGCTCATCA +
Preference number: 4 (lower is better)
Translates to: IRGDPAEGAVMRFPRCTFLVHNM*VMLCSS
Trigger: TGATGAGCACAGCATTACTCACATATTGTGTACAAG...AAATGTGCACCTTGGAAACCGCATGACAGCCCCCTCGGCAGGGTCCCCGCGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp TCTCCTATTGTTTTTCCAAGCTGGAGAAGAAGCAGGCGCTCCCTCCATTCCAGCACGTCACGTCTTCTGTaGTTTCGGCCAAGCACTGGG +
Preference number: 4 (lower is better)
Translates to: SPIVFPSWRRSRRSLHSSTSRLL*FRPSTG
Trigger: CCCAGTGCTTGGCCGAAAGCACAGAAGACGTGACGT...GCTGGAATGGAGGGAGCGCCTGCTTCTTCTCCAGCTTGGAAAAACAATAGGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp TTGTCAAATCCAGCATTTGACGGTCCTCTGGGTGACCCGGAGAACACCAAGGCTTTCCCGAGCTGTTTTTaGTTCTGGGGGCGAACTCCT +
Preference number: 4 (lower is better)
Translates to: LSNPAFDGPLGDPENTKAFPSCF*FWGRTP
Trigger: AGGAGTTCGCCCCCAGAAGCAAAAACAGCTCGGGAA...AGCCTTGGTGTTCTCCGGGTCACCCAGAGGACCGTCAAATGCTGGATTTGACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000420515.1
CDS-3UTR CCA 90 bp TTTGCCCACAGGGATGCCATAAAGAGGATCGACCAGTCAGAGTTCGAAGGCTTTTGGCCGGCTCTCCTGTaGATGACACTCACCCTTGAC +
Preference number: 4 (lower is better)
Translates to: FAHRDAIKRIDQSEFEGFWPALL*MTLTLD
Trigger: GTCAAGGGTGAGTGTCATCCACAGGAGAGCCGGCCA...AAAGCCTTCGAACTCTGACTGGTCGATCCTCTTTATGGCATCCCTGTGGGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp GTCCCACCCGCCTGGTGTCATCTCTCCAGTGGGCGTTGGGGGAGGATTCTTATGAATAAAATGTTCCGATaGTGTGGAAGCTCCTCTGAT +
Preference number: 4 (lower is better)
Translates to: VPPAWCHLSSGRWGRILMNKMFR*CGSSSD
Trigger: ATCAGAGGAGCTTCCACATCATCGGAACATTTTATT...CATAAGAATCCTCCCCCAACGCCCACTGGAGAGATGACACCAGGCGGGTGGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp CCTCTGAGTGAGGCCTGGTGCACAGGTGTGGAAATTGCCACGCAGCCCTCTTGGGTTTCATTTTGTGATTaGAGTGCGTGCAAAACACTC +
Preference number: 4 (lower is better)
Translates to: PLSEAWCTGVEIATQPSWVSFCD*SACKTL
Trigger: GAGTGTTTTGCACGCACTTCAATCACAAAATGAAAC...CCAAGAGGGCTGCGTGGCAATTTCCACACCTGTGCACCAGGCCTCACTCAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp TGTGCTTTCGGCCAAGCACTGGGCCAGGTGGCTGTCAACATCCAGCTGGGTCAGTGGTTTGAAAAATCCTaGTATTTGCTAATGGCTCCG +
Preference number: 4 (lower is better)
Translates to: CAFGQALGQVAVNIQLGQWFEKS*YLLMAP
Trigger: CGGAGCCATTAGCAAATATCAGGATTTTTCAAACCA...CTGACCCAGCTGGATGTTGACAGCCACCTGGCCCAGTGCTTGGCCGAAAGCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428120.5
CDS-3UTR GCA 90 bp CTTGAAGCATTCCAGACACACCAAGGCCTGGACCTGACTTCATTGACGCCTACTATCCCAGGGTGGCTGTaGAAACCCTTGTTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: LEAFQTHQGLDLTSLTPTIPGWL*KPLFPK
Trigger: CTTTGGGAACAAGGGTTTGCACAGCCACCCTGGGAT...AGTAGGCGTCAATGAAGTCAGGTCCAGGCCTTGGTGTGTCTGGAATGCTTCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420515.1
CDS-3UTR CCA 90 bp CACATTTTCCACGGAAACAGAACTCGATGCACTGACCTGCTCCGCCAGGAAAGTCCTCTGAGTGAGGCCTaGTGCACAGGTGTGGAAATT +
Preference number: 4 (lower is better)
Translates to: HIFHGNRTRCTDLLRQESPLSEA*CTGVEI
Trigger: AATTTCCACACCTGTGCACCAGGCCTCACTCAGAGG...ACTTTCCTGGCGGAGCAGGTCAGTGCATCGAGTTCTGTTTCCGTGGAAAATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp CTATTGTTTTTCCAAGCTGGAGAAGAAGCAGGCGCTCCCTCCATTCCAGCCACAAGCTGTTTTTGCTTCTaGGGGCGAACTCCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: LLFFQAGEEAGAPSIPATSCFCF*GRTPSG
Trigger: GCCAGAAGGAGTTCGCCCCCAGAAGCAAAAACAGCT...TGTGGCTGGAATGGAGGGAGCGCCTGCTTCTTCTCCAGCTTGGAAAAACAATAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000428120.5
CDS-3UTR CCA 90 bp GGCTCTCCCTTACGATCAAGTGTTCGAATGTGCTTGAAGCATTCCAGACACACCCATTTGACGGTCCTCTaGGTGACCCGGAGAACACCA +
Preference number: 4 (lower is better)
Translates to: GSPLRSSVRMCLKHSRHTHLTVL*VTRRTP
Trigger: TGGTGTTCTCCGGGTCACCCAGAGGACCGTCAAATG...GGTGTGTCTGGAATGCTTCAAGCACATTCGAACACTTGATCGTAAGGGAGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420515.1
CDS-3UTR TCA 90 bp AATGGCTCCGGTCACGACGGTGTCTTTTGGAAGTGGTTCTCGAAAACTCTGGTGGATGACACTCACCCTTaGCTGCCAGGGTCATTCAAA +
Preference number: 4 (lower is better)
Translates to: NGSGHDGVFWKWFSKTLVDDTHP*LPGSFK
Trigger: TTTGAATGACCCTGGCAGTCAAGGGTGAGTGTCATC...CACCAGAGTTTTCGAGAACCACTTCCAAAAGACACCGTCGTGACCGGAGCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp TTTTTCCAAGCTGGAGAAGAAGCAGGCGCTCCCTCCATTCCAGCCACAGATCACCAGACGACTACGGTCTaGACAACTTTGACACACAGT +
Preference number: 4 (lower is better)
Translates to: FFQAGEEAGAPSIPATDHQTTTV*TTLTHS
Trigger: ACTGTGTGTCAAAGTTGTCCAGACCGTAGTCGTCTG...GTGATCTGTGGCTGGAATGGAGGGAGCGCCTGCTTCTTCTCCAGCTTGGAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp CAGCCACAGATCACAGACGACTACGGTCTGGACAACTTTGACACACAGTTCACCGAGCGTGTAGCGTCCTaGGGAATAAAATGTTCCGAT +
Preference number: 4 (lower is better)
Translates to: QPQITDDYGLDNFDTQFTERVAS*GIKCSD
Trigger: ATCGGAACATTTTATTCCTCAGGACGCTACACGCTC...GGTGAACTGTGTGTCAAAGTTGTCCAGACCGTAGTCGTCTGTGATCTGTGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp AAGAAGCAGGCGCTCCCTCCATTCCAGCCACAGATCACAGACGACTACGGTCTGCACTGTTTCATTTTGTaGTTGAAGTGCGTGCAAAAC +
Preference number: 4 (lower is better)
Translates to: KKQALPPFQPQITDDYGLHCFIL*LKCVQN
Trigger: GTTTTGCACGCACTTCAATCACAAAATGAAACAGTG...CAGACCGTAGTCGTCTGTGATCTGTGGCTGGAATGGAGGGAGCGCCTGCTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp GTGTTGCCAGTAGCGTGCCGGTTACCAGTTTGGCCGTTCTTGTACACAATATGTGAGCGTGTAGCGTCCTaGGGAATAAAATGTTCCGAT +
Preference number: 4 (lower is better)
Translates to: VLPVACRLPVWPFLYTICERVAS*GIKCSD
Trigger: ATCGGAACATTTTATTCCTCAGGACGCTACACGCTC...ACATATTGTGTACAAGAACGGCCAAACTGGTAACCGGCACGCTACTGGCAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp TGCAATCATACTTCACTACAGCCTCCAATTCCTGGCTCAAGGGAATCCTCCCACGTGTTCGAATGTGCTTaGAGCATTCCAGACACACCA +
Preference number: 4 (lower is better)
Translates to: CNHTSLQPPIPGSRESSHVFECA*SIPDTP
Trigger: TGGTGTGTCTGGAATGCTTCAAGCACATTCGAACAC...GTGGGAGGATTCCCTTGAGCCAGGAATTGGAGGCTGTAGTGAAGTATGATTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420515.1
CDS-3UTR CCA 90 bp GTGTTGCCAGTAGCGTGCCGGTTACCAGTTTGGCCGTTCTTGTACACAATATGTATTGTTTTTCCAAGCTaGAGAAGAAGCAGGCGCTCC +
Preference number: 4 (lower is better)
Translates to: VLPVACRLPVWPFLYTICIVFPS*RRSRRS
Trigger: GGAGCGCCTGCTTCTTCTCCAGCTTGGAAAAACAAT...ACATATTGTGTACAAGAACGGCCAAACTGGTAACCGGCACGCTACTGGCAACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp CTTGAAGCATTCCAGACACACCAAGGCCTGGACCTGACTTCATTGACGCCTACTTGTTGTTGTTGTTGTTaGCTGCCAACTTTGGACTCC +
Preference number: 4 (lower is better)
Translates to: LEAFQTHQGLDLTSLTPTCCCCC*LPTLDS
Trigger: GGAGTCCAAAGTTGGCAGCCAACAACAACAACAACA...AGTAGGCGTCAATGAAGTCAGGTCCAGGCCTTGGTGTGTCTGGAATGCTTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420515.1
CDS-3UTR CCA 90 bp CACATTTTCCACGGAAACAGAACTCGATGCACTGACCTGCTCCGCCAGGAAAGTTGTTGTTGTTGTTGTTaGCTGCCAACTTTGGACTCC +
Preference number: 4 (lower is better)
Translates to: HIFHGNRTRCTDLLRQESCCCCC*LPTLDS
Trigger: GGAGTCCAAAGTTGGCAGCCAACAACAACAACAACA...ACTTTCCTGGCGGAGCAGGTCAGTGCATCGAGTTCTGTTTCCGTGGAAAATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428120.5
CDS-3UTR TCA 90 bp GTTTTTCCAAGCTGGAGAAGAAGCAGGCGCTCCCTCCATTCCAGCCACAGATCAAATAAAATGTTCCGATaGTGTGGAAGCTCCTCTGAT +
Preference number: 4 (lower is better)
Translates to: VFPSWRRSRRSLHSSHRSNKMFR*CGSSSD
Trigger: ATCAGAGGAGCTTCCACATCATCGGAACATTTTATT...TGATCTGTGGCTGGAATGGAGGGAGCGCCTGCTTCTTCTCCAGCTTGGAAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp TTTTCCACGGAAACAGAACTCGATGCACTGACCTGCTCCGCCAGGAAAGTGAGCCTTGTACACAATATGTaGGTAATGCTGTGCTCATCA +
Preference number: 4 (lower is better)
Translates to: FSTETELDALTCSARKVSLVHNM*VMLCSS
Trigger: TGATGAGCACAGCATTACTCACATATTGTGTACAAG...GCTCACTTTCCTGGCGGAGCAGGTCAGTGCATCGAGTTCTGTTTCCGTGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp GTGTTGCCAGTAGCGTGCCGGTTACCAGTTTGGCCGTTCTTGTACACAATATGTATGCGGTTTCCAAGGTaGACATTTTCCACGGAAACA +
Preference number: 4 (lower is better)
Translates to: VLPVACRLPVWPFLYTICMRFPR*TFSTET
Trigger: TGTTTCCGTGGAAAATGTGCACCTTGGAAACCGCAT...ACATATTGTGTACAAGAACGGCCAAACTGGTAACCGGCACGCTACTGGCAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp CTATTGTTTTTCCAAGCTGGAGAAGAAGCAGGCGCTCCCTCCATTCCAGCCACAGGTCATTCAAAGTCTTaGACATCCATGAAAGACACG +
Preference number: 4 (lower is better)
Translates to: LLFFQAGEEAGAPSIPATGHSKS*TSMKDT
Trigger: CGTGTCTTTCATGGATGTGCAAGACTTTGAATGACC...TGTGGCTGGAATGGAGGGAGCGCCTGCTTCTTCTCCAGCTTGGAAAAACAATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CCA 90 bp TGGATGACACTCACCCTTGACTGCCAGGGTCATTCAAAGTCTTGCACATCCATGTGCCGGTTACCAGTTTaGCCGTTCTTGTACACAATA +
Preference number: 4 (lower is better)
Translates to: WMTLTLDCQGHSKSCTSMCRLPV*PFLYTI
Trigger: TATTGTGTACAAGAACGGCCAAACTGGTAACCGGCA...CATGGATGTGCAAGACTTTGAATGACCCTGGCAGTCAAGGGTGAGTGTCATCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428120.5
CDS-3UTR TCA 90 bp CACATTTTCCACGGAAACAGAACTCGATGCACTGACCTGCTCCGCCAGGAAAGTAATAAAATGTTCCGATaGTGTGGAAGCTCCTCTGAT +
Preference number: 4 (lower is better)
Translates to: HIFHGNRTRCTDLLRQESNKMFR*CGSSSD
Trigger: ATCAGAGGAGCTTCCACATCATCGGAACATTTTATT...ACTTTCCTGGCGGAGCAGGTCAGTGCATCGAGTTCTGTTTCCGTGGAAAATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400918.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp CAATCTGGTAGGGATGATGCCCGCGCGGAGCTGACCCTTCTCCTATTGTTTTTCAGAGTTCGAAGGCTTTaGGTATATCAACCCATTATT +
Preference number: 4 (lower is better)
Translates to: QSGRDDARAELTLLLLFFRVRRL*VYQPII
Trigger: AATAATGGGTTGATATACTCAAAGCCTTCGAACTCT...GAAAAACAATAGGAGAAGGGTCAGCTCCGCGCGGGCATCATCCCTACCAGATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp TCTCCTATTGTTTTTCCAAGCTGGAGAAGAAGCAGGCGCTCCCTCCATTCCAGCGTTTCATTTTGTGATTaGAGTGCGTGCAAAACACTC +
Preference number: 4 (lower is better)
Translates to: SPIVFPSWRRSRRSLHSSVSFCD*SACKTL
Trigger: GAGTGTTTTGCACGCACTTCAATCACAAAATGAAAC...GCTGGAATGGAGGGAGCGCCTGCTTCTTCTCCAGCTTGGAAAAACAATAGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR TCA 90 bp CTATTGTTTTTCCAAGCTGGAGAAGAAGCAGGCGCTCCCTCCATTCCAGCCACAGTTTCATTTTGTGATTaGAGTGCGTGCAAAACACTC +
Preference number: 4 (lower is better)
Translates to: LLFFQAGEEAGAPSIPATVSFCD*SACKTL
Trigger: GAGTGTTTTGCACGCACTTCAATCACAAAATGAAAC...TGTGGCTGGAATGGAGGGAGCGCCTGCTTCTTCTCCAGCTTGGAAAAACAATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp TTGTCAAATCCAGCATTTGACGGTCCTCTGGGTGACCCGGAGAACACCAAGGCTCAAGCTTTCAGCAACTaGTTAAAAAGCTCAAAATGG +
Preference number: 4 (lower is better)
Translates to: LSNPAFDGPLGDPENTKAQAFSN*LKSSKW
Trigger: CCATTTTGAGCTTTTTAAGCAGTTGCTGAAAGCTTG...AGCCTTGGTGTTCTCCGGGTCACCCAGAGGACCGTCAAATGCTGGATTTGACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420515.1
CDS-3UTR TCA 90 bp TCTCCTATTGTTTTTCCAAGCTGGAGAAGAAGCAGGCGCTCCCTCCATTCCAGCAGAGTTCGAAGGCTTTaGGTATATCAACCCATTATT +
Preference number: 4 (lower is better)
Translates to: SPIVFPSWRRSRRSLHSSRVRRL*VYQPII
Trigger: AATAATGGGTTGATATACTCAAAGCCTTCGAACTCT...GCTGGAATGGAGGGAGCGCCTGCTTCTTCTCCAGCTTGGAAAAACAATAGGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR GCA 90 bp ACACCAAGGCCTGGACCTGACTTCATTGACGCCTACTTAGGAAAAATTGAGGCATCAAGTGTTCGAATGTaGTTGAAGCATTCCAGACAC +
Preference number: 4 (lower is better)
Translates to: TPRPGPDFIDAYLGKIEASSVRM*LKHSRH
Trigger: GTGTCTGGAATGCTTCAAGCACATTCGAACACTTGA...TGCCTCAATTTTTCCTAAGTAGGCGTCAATGAAGTCAGGTCCAGGCCTTGGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420515.1
CDS-3UTR CAA 90 bp GCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAGGGGGCTGTCGCCAGGGACAGACGCTaGCGCCGAGACCGCAGAGGG +
Preference number: 5 (lower is better)
Translates to: AAVPASRRIRGDPAEGAVARDRR*RRDRRG
Trigger: CCCTCTGCGGTCTCGGCGCAAGCGTCTGTCCCTGGC...GACAGCCCCCTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS GCA 90 bp GTGCAGGCTGCCAACCTGCCACTCTGGGAGGCCCCACGCGGCCCCTaGACCTCTCAGGAGGGCGCTGGCGCTGGGATGGTGGCCGGCCAG +
Preference number: 5 (lower is better)
Translates to: VQAANLPLWEAPRGP*TSQEGAGAGMVAGQ
Trigger: CTGGCCGGCCACCATCCCAGCGCCAGCGCCCTCCTGAGAGGTGCAGGGGCCGCGTGGGGCCTCCCAGAGTGGCAGGTTGGCAGCCTGCAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS CCA 90 bp CCGGCAGACAGGCGGCCTGACCCGGAGAAAAGGCAGGACGGCGGGTaGCCTGCCAGGGAGAGCCGCCGCGGCTGCGTCTACAGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: PADRRPDPEKRQDGG*PARESRRGCVYRRQ
Trigger: CTGCCTCCTGTAGACGCAGCCGCGGCGGCTCTCCCTGGCAGGCCACCCGCCGTCCTGCCTTTTCTCCGGGTCAGGCCGCCTGTCTGCCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS GCA 90 bp GCTGGGTCAGCCTGGGGGCGAACTCCTTCTGGCACATGGGGCAGCTaGGCAGGGCCGCGGCACCCTCCACAGACGGCTGCTGCTCCACCC +
Preference number: 5 (lower is better)
Translates to: AGSAWGRTPSGTWGS*AGPRHPPQTAAAPP
Trigger: GGGTGGAGCAGCAGCCGTCTGTGGAGGGTGCCGCGGCCCTGCGCAGCTGCCCCATGTGCCAGAAGGAGTTCGCCCCCAGGCTGACCCAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000378543.2
ENST00000378546.9
ENST00000401813.7
ENST00000414253.5
ENST00000476803.1
ENST00000487186.5
CDS GCA 90 bp GGCCTACTCACCTGGGGGCGAACTCCTTCTGGCACATGGGGCAGCTaGGCAGGGCCGCGGCACCCTCCACAGACGGCTGCTGCTCCACCC +
Preference number: 5 (lower is better)
Translates to: GLLTWGRTPSGTWGS*AGPRHPPQTAAAPP
Trigger: GGGTGGAGCAGCAGCCGTCTGTGGAGGGTGCCGCGGCCCTGCGCAGCTGCCCCATGTGCCAGAAGGAGTTCGCCCCCAGGTGAGTAGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS GCA 90 bp AGGAGGGACCAAGCCTCACCACGGAGAAGGACGCCGTCACCGGCGTaGAGGCTGCCAACCTGCCACTCTGGGAGGCCCCACGCGGCCCCT +
Preference number: 5 (lower is better)
Translates to: RRDQASPRRRTPSPA*RLPTCHSGRPHAAP
Trigger: AGGGGCCGCGTGGGGCCTCCCAGAGTGGCAGGTTGGCAGCCTGCACGCCGGTGACGGCGTCCTTCTCCGTGGTGAGGCTTGGTCCCTCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS GCA 90 bp AGCCTGCAAGGGAGGGGCCACACTCACTCGGCCACCTCCGCGGCATaGTGGCCGCAGAGAGCACCGTCTGGACCTCCGGGCCCTCTCTGC +
Preference number: 5 (lower is better)
Translates to: SLQGRGHTHSATSAA*WPQRAPSGPPGPLC
Trigger: GCAGAGAGGGCCCGGAGGTCCAGACGGTGCTCTCTGCGGCCAGCATGCCGCGGAGGTGGCCGAGTGAGTGTGGCCCCTCCCTTGCAGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS CCA 90 bp CGCAGGGGTGGCCTACTCACCTGGGGGCGAACTCCTTCTGGCACATaGGGCAGCTGCGCAGGGCCGCGGCACCCTCCACAGACGGCTGCT +
Preference number: 5 (lower is better)
Translates to: RRGGLLTWGRTPSGT*GSCAGPRHPPQTAA
Trigger: AGCAGCCGTCTGTGGAGGGTGCCGCGGCCCTGCGCAGCTGCCCCATGTGCCAGAAGGAGTTCGCCCCCAGGTGAGTAGGCCACCCCTGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS CCA 90 bp GGCCAGCCCGGCTGCAGGACAGTGGGGGCTCAGTCCAGAAGCCTCTaGTGGCTTCTGCGTGTGGGCAGGGGAGCAGGGCTGCAGGGTGGG +
Preference number: 5 (lower is better)
Translates to: GQPGCRTVGAQSRSL*WLLRVGRGAGLQGG
Trigger: CCCACCCTGCAGCCCTGCTCCCCTGCCCACACGCAGAAGCCACCAGAGGCTTCTGGACTGAGCCCCCACTGTCCTGCAGCCGGGCTGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS CCA 90 bp CTCAGGAGGGCGCTGGCGCTGGGATGGTGGCCGGCCAGGCAGGGGTaGCAGGAGAAAACCCATCCGAGTCCTGCAGGTCAGCGCCCTGGG +
Preference number: 5 (lower is better)
Translates to: LRRALALGWWPARQG*QEKTHPSPAGQRPG
Trigger: CCCAGGGCGCTGACCTGCAGGACTCGGATGGGTTTTCTCCTGCCACCCCTGCCTGGCCGGCCACCATCCCAGCGCCAGCGCCCTCCTGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS CCA 90 bp CTGCAAGGGAGGGGCCACACTCACTCGGCCACCTCCGCGGCATGCTaGCCGCAGAGAGCACCGTCTGGACCTCCGGGCCCTCTCTGCTCC +
Preference number: 5 (lower is better)
Translates to: LQGRGHTHSATSAAC*PQRAPSGPPGPLCS
Trigger: GGAGCAGAGAGGGCCCGGAGGTCCAGACGGTGCTCTCTGCGGCCAGCATGCCGCGGAGGTGGCCGAGTGAGTGTGGCCCCTCCCTTGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS-3UTR CAA 90 bp GCGGATCCGCGGGGACCCTGCCGAGGGGGCTGTCATGCGGTTTCCAAGGTGCACTGCCACGCAGCCCTCTaGGCCAGGCGCAGAGACCCC +
Preference number: 5 (lower is better)
Translates to: ADPRGPCRGGCHAVSKVHCHAAL*ARRRDP
Trigger: GGGGTCTCTGCGCCTGGCCAAGAGGGCTGCGTGGCA...GTGCACCTTGGAAACCGCATGACAGCCCCCTCGGCAGGGTCCCCGCGGATCCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CAA 90 bp CAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGCCAGGGACAGACGCTaGCGCCGAGACCGCAGAGGG +
Preference number: 5 (lower is better)
Translates to: QLRAGGTCCCACVAADPRARDRR*RRDRRG
Trigger: CCCTCTGCGGTCTCGGCGCAAGCGTCTGTCCCTGGC...CCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS GCA 90 bp CCAAAAGGCCCGGGCAGCCTTCTGACGCAGCCAGGAACTGGGCTGTaGTCCACCACACCTGCTGGCCCGTGGATGCCAGGCAGGCACGCC +
Preference number: 5 (lower is better)
Translates to: PKGPGSLLTQPGTGL*STTPAGPWMPGRHA
Trigger: GGCGTGCCTGCCTGGCATCCACGGGCCAGCAGGTGTGGTGGAGCACAGCCCAGTTCCTGGCTGCGTCAGAAGGCTGCCCGGGCCTTTTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000401813.7
ENST00000487186.5
CDS GCA 90 bp TGGCCGCAGAGAGCACCGTCTGGACCTCCGGGCCCTCTCTGCTCCTaGCGCTGGAGAGGATCCGGCTGGTCAGAAACAAGGGACGGGGCC +
Preference number: 5 (lower is better)
Translates to: WPQRAPSGPPGPLCS*RWRGSGWSETRDGA
Trigger: GGCCCCGTCCCTTGTTTCTGACCAGCCGGATCCTCTCCAGCGGCAGGAGCAGAGAGGGCCCGGAGGTCCAGACGGTGCTCTCTGCGGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS CCA 90 bp CAACATCCAGCTGGGTCAGCCTGGGGGCGAACTCCTTCTGGCACATaGGGCAGCTGCGCAGGGCCGCGGCACCCTCCACAGACGGCTGCT +
Preference number: 5 (lower is better)
Translates to: QHPAGSAWGRTPSGT*GSCAGPRHPPQTAA
Trigger: AGCAGCCGTCTGTGGAGGGTGCCGCGGCCCTGCGCAGCTGCCCCATGTGCCAGAAGGAGTTCGCCCCCAGGCTGACCCAGCTGGATGTTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000378543.2
ENST00000378546.9
ENST00000401813.7
ENST00000414253.5
ENST00000476803.1
ENST00000487186.5
CDS-3UTR CAA 90 bp GCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAGCAGAACAGGTGGGGGCGGGAGTaGAAGTACCTGGGGGCGAAC +
Preference number: 5 (lower is better)
Translates to: ACAETAEGSVSGRCWEQNRWGRE*KYLGAN
Trigger: GTTCGCCCCCAGGTACTTCAACTCCCGCCCCCACCT...GTTCTGCTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000400919.7
CDS-3UTR CAA 90 bp GCGGCGGATCCGCGGGGACCCTGCCGAGGGGGCTGTCATGCGGTTTCCAAGGTGGGCCGCTCCACCCCATaGTGCGGCTGGTGGCTAAAT +
Preference number: 5 (lower is better)
Translates to: AADPRGPCRGGCHAVSKVGRSTP*CGWWLN
Trigger: ATTTAGCCACCAGCCGCACAATGGGGTGGAGCGGCC...CACCTTGGAAACCGCATGACAGCCCCCTCGGCAGGGTCCCCGCGGATCCGCCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS TCA 90 bp CACCTGGGCTCCTGTCCTGGGAAGGCGGGCAGTGAAGGCACCTCGTaGTCCAGGATCAGCTCCGGGCTCACCGTGCGCAGTAGCTCGGCC +
Preference number: 5 (lower is better)
Translates to: HLGSCPGKAGSEGTS*SRISSGLTVRSSSA
Trigger: GGCCGAGCTACTGCGCACGGTGAGCCCGGAGCTGATCCTGGATCACGAGGTGCCTTCACTGCCCGCCTTCCCAGGACAGGAGCCCAGGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000378546.9
ENST00000400918.7
ENST00000401813.7
ENST00000414253.5
ENST00000420515.1
ENST00000428120.5
ENST00000476803.1
ENST00000487186.5
ENST00000497675.2
CDS CCA 90 bp CCTGTGCTCTGGGCCTGGGGACGCTGGTGCCACCAGATTCCAGGATaGCCAGGTGGACCCGGGGCCAGTGCTCCCAGCCTTCCTTCTGTG +
Preference number: 5 (lower is better)
Translates to: PVLWAWGRWCHQIPG*PGGPGASAPSLPSV
Trigger: CACAGAAGGAAGGCTGGGAGCACTGGCCCCGGGTCCACCTGGCCATCCTGGAATCTGGTGGCACCAGCGTCCCCAGGCCCAGAGCACAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS CCA 90 bp CAGAGAGCACCGTCTGGACCTCCGGGCCCTCTCTGCTCCTGCCGCTaGAGAGGATCCGGCTGGTCAGAAACAAGGGACGGGGCCACCCCA +
Preference number: 5 (lower is better)
Translates to: QRAPSGPPGPLCSCR*RGSGWSETRDGATP
Trigger: TGGGGTGGCCCCGTCCCTTGTTTCTGACCAGCCGGATCCTCTCCAGCGGCAGGAGCAGAGAGGGCCCGGAGGTCCAGACGGTGCTCTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS TCA 90 bp TCTCTGCCCAGCGCTGACACCCTGCAAATCAGGCTAAGACAGCGGTaGCGGGCCCTGAGGCTGGCAGGCCTAAGCAGCCCGGTGGCCGTG +
Preference number: 5 (lower is better)
Translates to: SLPSADTLQIRLRQR*RALRLAGLSSPVAV
Trigger: CACGGCCACCGGGCTGCTTAGGCCTGCCAGCCTCAGGGCCCGTCACCGCTGTCTTAGCCTGATTTGCAGGGTGTCAGCGCTGGGCAGAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401813.7
CDS TCA 90 bp GGCCAAGGTGTGGCCCTGGAAGCCAGGACAGTTGACTTCCGGCCATaGCTCCCGGAGAGTGCCGGAGCTGGCGTGCTCAGCAGAGCTGCC +
Preference number: 5 (lower is better)
Translates to: GQGVALEARTVDFRP*LPESAGAGVLSRAA
Trigger: GGCAGCTCTGCTGAGCACGCCAGCTCCGGCACTCTCCGGGAGTCATGGCCGGAAGTCAACTGTCCTGGCTTCCAGGGCCACACCTTGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS GCA 90 bp CAGCCTTCTGACGCAGCCAGGAACTGGGCTGTGCTCCACCACACCTaGTGGCCCGTGGATGCCAGGCAGGCACGCCCACCCATAGCCAGA +
Preference number: 5 (lower is better)
Translates to: QPSDAARNWAVLHHT*WPVDARQARPPIAR
Trigger: TCTGGCTATGGGTGGGCGTGCCTGCCTGGCATCCACGGGCCAGCAGGTGTGGTGGAGCACAGCCCAGTTCCTGGCTGCGTCAGAAGGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000401813.7
ENST00000487186.5
CDS GCA 90 bp CCGCCACGCACCAAGTTCAGCTTGAAAACGCTGAGCCCAGCTGGGTaGGGGGAGCCCTCGGTCTCCTGTCCACCACACCCGGAGCTGAGG +
Preference number: 5 (lower is better)
Translates to: PPRTKFSLKTLSPAG*GEPSVSCPPHPELR
Trigger: CCTCAGCTCCGGGTGTGGTGGACAGGAGACCGAGGGCTCCCCGCACCCAGCTGGGCTCAGCGTTTTCAAGCTGAACTTGGTGCGTGGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487186.5
CDS GCA 90 bp CACTCTCGGGAAGGTGTTCCTGTGCTCTGGGCCTGGGGACGCTGGTaGCACCAGATTCCAGGATGGCCAGGTGGACCCGGGGCCAGTGCT +
Preference number: 5 (lower is better)
Translates to: HSREGVPVLWAWGRW*HQIPGWPGGPGASA
Trigger: AGCACTGGCCCCGGGTCCACCTGGCCATCCTGGAATCTGGTGGCACCAGCGTCCCCAGGCCCAGAGCACAGGAACACCTTCCCGAGAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS GCA 90 bp GCATGCTGGCCGCAGAGAGCACCGTCTGGACCTCCGGGCCCTCTCTaGTCCTGCCGCTGGAGAGGATCCGGCTGGTCAGAAACAAGGGAC +
Preference number: 5 (lower is better)
Translates to: ACWPQRAPSGPPGPL*SCRWRGSGWSETRD
Trigger: GTCCCTTGTTTCTGACCAGCCGGATCCTCTCCAGCGGCAGGAGCAGAGAGGGCCCGGAGGTCCAGACGGTGCTCTCTGCGGCCAGCATGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS CCA 90 bp AGGACAGCCAAAAGGCCCGGGCAGCCTTCTGACGCAGCCAGGAACTaGGCTGTGCTCCACCACACCTGCTGGCCCGTGGATGCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: RTAKRPGQPSDAARN*AVLHHTCWPVDARQ
Trigger: CTGCCTGGCATCCACGGGCCAGCAGGTGTGGTGGAGCACAGCCCAGTTCCTGGCTGCGTCAGAAGGCTGCCCGGGCCTTTTGGCTGTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000401813.7
ENST00000487186.5
CDS CCA 90 bp GCCGAGAGAAGGAAGGACGCTGCCCCCAAGGACAGACGGGCAAGCTaGAGTCAGGAGAGGCGCAGCCGTGGCCCACAGGCCTTGGATCTC +
Preference number: 5 (lower is better)
Translates to: AERRKDAAPKDRRAS*SQERRSRGPQALDL
Trigger: GAGATCCAAGGCCTGTGGGCCACGGCTGCGCCTCTCCTGACTCCAGCTTGCCCGTCTGTCCTTGGGGGCAGCGTCCTTCCTTCTCTCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420964.1
ENST00000487186.5
CDS CCA 90 bp GTCCTCCAAGTGGGCCAGGAAACCTCTGCAGGTGGAGAGGGTGGCTaGGACCCCCTCGGGAGTCCCCAGGGAAGGTCTGGCTTCTCGGCT +
Preference number: 5 (lower is better)
Translates to: VLQVGQETSAGGEGG*DPLGSPQGRSGFSA
Trigger: AGCCGAGAAGCCAGACCTTCCCTGGGGACTCCCGAGGGGGTCCCAGCCACCCTCTCCACCTGCAGAGGTTTCCTGGCCCACTTGGAGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487186.5
CDS CCA 90 bp AGAGCTGGAAGGGGGCCCTTGGAGGATCCCCCAAGGTCCTCCAAGTaGGCCAGGAAACCTCTGCAGGTGGAGAGGGTGGCTGGGACCCCC +
Preference number: 5 (lower is better)
Translates to: RAGRGPLEDPPRSSK*ARKPLQVERVAGTP
Trigger: GGGGGTCCCAGCCACCCTCTCCACCTGCAGAGGTTTCCTGGCCCACTTGGAGGACCTTGGGGGATCCTCCAAGGGCCCCCTTCCAGCTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000487186.5
CDS CCA 90 bp CTGGGCCTGGGGACGCTGGTGCCACCAGATTCCAGGATGGCCAGGTaGACCCGGGGCCAGTGCTCCCAGCCTTCCTTCTGTGCTGTTCTG +
Preference number: 5 (lower is better)
Translates to: LGLGTLVPPDSRMAR*TRGQCSQPSFCAVL
Trigger: CAGAACAGCACAGAAGGAAGGCTGGGAGCACTGGCCCCGGGTCCACCTGGCCATCCTGGAATCTGGTGGCACCAGCGTCCCCAGGCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS CCA 90 bp ACGCACTCTCGGGAAGGTGTTCCTGTGCTCTGGGCCTGGGGACGCTaGTGCCACCAGATTCCAGGATGGCCAGGTGGACCCGGGGCCAGT +
Preference number: 5 (lower is better)
Translates to: THSREGVPVLWAWGR*CHQIPGWPGGPGAS
Trigger: ACTGGCCCCGGGTCCACCTGGCCATCCTGGAATCTGGTGGCACCAGCGTCCCCAGGCCCAGAGCACAGGAACACCTTCCCGAGAGTGCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS-3UTR CAA 90 bp GCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAGGGGGCTGTCATGACGGTCTGGACAACTTaGACACACAGTTCACCAGCG +
Preference number: 5 (lower is better)
Translates to: AVPASRRIRGDPAEGAVMTVWTT*THSSPA
Trigger: CGCTGGTGAACTGTGTGTCAAAGTTGTCCAGACCGT...CATGACAGCCCCCTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CAA 90 bp GTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCACAGGTGTGGAAATaGCCACGCAGCCCTCTTGGC +
Preference number: 5 (lower is better)
Translates to: VLEELAAVPASRRIRGDPAQVWK*PRSPLG
Trigger: GCCAAGAGGGCTGCGTGGCAATTTCCACACCTGTGC...AGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CAA 90 bp GGCTGCACAGTGGGCCTGCGTGGGCGTGGTGCGGGGCAACTGCCCATGGAGCCCATTCCCGAGCTGTTTTaGCTTCTGGGGGCGAACTCC +
Preference number: 5 (lower is better)
Translates to: GCTVGLRGRGAGQLPMEPIPELF*LLGANS
Trigger: GGAGTTCGCCCCCAGAAGCAAAAACAGCTCGGGAAT...GGGCTCCATGGGCAGTTGCCCCGCACCACGCCCACGCAGGCCCACTGTGCAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000428120.5
CDS TCA 90 bp GAGCTGGCGTGCTCAGCAGAGCTGCCGGGGACGATGTCCCGGGGCTaGGTGGGCGGCTTCAGCCTAGACTTGGGCCTAGATCTTGCTGGA +
Preference number: 5 (lower is better)
Translates to: ELACSAELPGTMSRG*VGGFSLDLGLDLAG
Trigger: TCCAGCAAGATCTAGGCCCAAGTCTAGGCTGAAGCCGCCCACTCAGCCCCGGGACATCGTCCCCGGCAGCTCTGCTGAGCACGCCAGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS GCA 90 bp CAGCCGTGTTTCCTACAGTGGAGAAGGGGACCCTGGCAGGAGCACTaGCCAGCCAGGCACGTGGTGCTCAACCCTGTGGGCACTGACCCC +
Preference number: 5 (lower is better)
Translates to: QPCFLQWRRGPWQEH*PARHVVLNPVGTDP
Trigger: GGGGTCAGTGCCCACAGGGTTGAGCACCACGTGCCTGGCTGGGCAGTGCTCCTGCCAGGGTCCCCTTCTCCACTGTAGGAAACACGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469733.5
CDS GCA 90 bp ATAGCTGGACCCCCACTCCCGGGGCTGGCTCCAGCAGCCATCAGCTaGCTTCTCACTCTGGCAGAGCCCACCCAGTGCCTTCTGAAGCCC +
Preference number: 5 (lower is better)
Translates to: IAGPPLPGLAPAAIS*LLTLAEPTQCLLKP
Trigger: GGGCTTCAGAAGGCACTGGGTGGGCTCTGCCAGAGTGAGAAGGCAGCTGATGGCTGCTGGAGCCAGCCCCGGGAGTGGGGGTCCAGCTAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS CCA 90 bp AATGGCCCAGCACCCACACACGGTGCCCTGGCAGTGCTCACCTGCTaGCAAGGACAGCCAAAAGGCCCGGGCAGCCTTCTGACGCAGCCA +
Preference number: 5 (lower is better)
Translates to: NGPAPTHGALAVLTC*QGQPKGPGSLLTQP
Trigger: TGGCTGCGTCAGAAGGCTGCCCGGGCCTTTTGGCTGTCCTTGCCAGCAGGTGAGCACTGCCAGGGCACCGTGTGTGGGTGCTGGGCCATT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401813.7
CDS CCA 90 bp TTCCCGAGCTGTTTTTGCTTCTGGGGGCGAACTCCTTCTGGCACATaGGGCAGCTGCGCAGGGCCGCGGCACCCTCCACAGACGGCTGCT +
Preference number: 5 (lower is better)
Translates to: FPSCFCFWGRTPSGT*GSCAGPRHPPQTAA
Trigger: AGCAGCCGTCTGTGGAGGGTGCCGCGGCCCTGCGCAGCTGCCCCATGTGCCAGAAGGAGTTCGCCCCCAGAAGCAAAAACAGCTCGGGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420515.1
ENST00000428120.5
ENST00000440825.6
CDS CCA 90 bp CGGCTGCAGGAGCAGCCGTGTTTCCTACAGTGGAGAAGGGGACCCTaGCAGGAGCACTGCCCAGCCAGGCACGTGGTGCTCAACCCTGTG +
Preference number: 5 (lower is better)
Translates to: RLQEQPCFLQWRRGP*QEHCPARHVVLNPV
Trigger: CACAGGGTTGAGCACCACGTGCCTGGCTGGGCAGTGCTCCTGCCAGGGTCCCCTTCTCCACTGTAGGAAACACGGCTGCTCCTGCAGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469733.5
CDS CCA 90 bp CAAGCCGCCACGCACCAAGTTCAGCTTGAAAACGCTGAGCCCAGCTaGGTGCGGGGAGCCCTCGGTCTCCTGTCCACCACACCCGGAGCT +
Preference number: 5 (lower is better)
Translates to: QAATHQVQLENAEPS*VRGALGLLSTTPGA
Trigger: AGCTCCGGGTGTGGTGGACAGGAGACCGAGGGCTCCCCGCACCCAGCTGGGCTCAGCGTTTTCAAGCTGAACTTGGTGCGTGGCGGCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487186.5
CDS CCA 90 bp GTGCTTTCGGCCAAGCACTGGGCCAGGTGGCTGTCAACATCCAGCTaGGTCAGCCTGCAAGGGAGGGGCCACACTCACTCGGCCACCTCC +
Preference number: 5 (lower is better)
Translates to: VLSAKHWARWLSTSS*VSLQGRGHTHSATS
Trigger: GGAGGTGGCCGAGTGAGTGTGGCCCCTCCCTTGCAGGCTGACCCAGCTGGATGTTGACAGCCACCTGGCCCAGTGCTTGGCCGAAAGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS-3UTR CAA 90 bp GGGCCCGGGCAGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGTCTCTCCAGTGGGCGTaGGGGGAGGATTCTTATGCG +
Preference number: 5 (lower is better)
Translates to: GPGQASFVLEELAAVPASSLQWA*GEDSYA
Trigger: CGCATAAGAATCCTCCCCCAACGCCCACTGGAGAGA...CGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCCCGGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CAA 90 bp GAGCGTGTCCGGGCGCCGCACTCTGCGCAGGGCTCTTGGATGGCGCTCACCACGATTCCCGAGCTGTTTTaGCTTCTGGGGGCGAACTCC +
Preference number: 5 (lower is better)
Translates to: ERVRAPHSAQGSWMALTTIPELF*LLGANS
Trigger: GGAGTTCGCCCCCAGAAGCAAAAACAGCTCGGGAAT...CGTGGTGAGCGCCATCCAAGAGCCCTGCGCAGAGTGCGGCGCCCGGACACGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440825.6
CDS-3UTR CAA 90 bp CGGGGCTGCTGGCGGGGGAGAGCGTGTCCGGGCGCCGCACTCTGCGCAGGGCTCTTGTTGTTGTTGTTGTaGGCTGCCAACTTTGGACTC +
Preference number: 5 (lower is better)
Translates to: RGCWRGRACPGAALCAGLLLLLL*AANFGL
Trigger: GAGTCCAAAGTTGGCAGCCAACAACAACAACAACAA...GAGCCCTGCGCAGAGTGCGGCGCCCGGACACGCTCTCCCCCGCCAGCAGCCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440825.6
CDS TCA 90 bp GCTCAGTCCAGCACAGGTGTTCTCGCTCTGGGGTTGGCCTGGCGCTaGCCTGTGCACCTGACAGGGAAGGTAGGCAGCTCTGGAGCTGGC +
Preference number: 5 (lower is better)
Translates to: AQSSTGVLALGLAWR*PVHLTGKVGSSGAG
Trigger: GCCAGCTCCAGAGCTGCCTACCTTCCCTGTCAGGTGCACAGGTCAGCGCCAGGCCAACCCCAGAGCGAGAACACCTGTGCTGGACTGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469733.5
ENST00000514625.1
CDS GCA 90 bp AGAGCAGGTGCTCGGGCCCACACATGGGGTGCAAGAGTAGGGGTGTaGCTTGGTGCCCTTGGGCACCGACAGCCTCCTCACAGCCTCAGT +
Preference number: 5 (lower is better)
Translates to: RAGARAHTWGARVGV*LGALGHRQPPHSLS
Trigger: ACTGAGGCTGTGAGGAGGCTGTCGGTGCCCAAGGGCACCAAGGCACACCCCTACTCTTGCACCCCATGTGTGGGCCCGAGCACCTGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000401813.7
ENST00000487186.5
CDS GCA 90 bp CTAAATGGCCCAGCACCCACACACGGTGCCCTGGCAGTGCTCACCTaGTGGCAAGGACAGCCAAAAGGCCCGGGCAGCCTTCTGACGCAG +
Preference number: 5 (lower is better)
Translates to: LNGPAPTHGALAVLT*WQGQPKGPGSLLTQ
Trigger: CTGCGTCAGAAGGCTGCCCGGGCCTTTTGGCTGTCCTTGCCAGCAGGTGAGCACTGCCAGGGCACCGTGTGTGGGTGCTGGGCCATTTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401813.7
CDS CCA 90 bp GATGGCGCTCACCACGTCACGTCTTCTGTGCTTTCGGCCAAGCACTaGGCCAGGTGGCTGTCAACATCCAGCTGGGTCAGCCTGGGGGCG +
Preference number: 5 (lower is better)
Translates to: DGAHHVTSSVLSAKH*ARWLSTSSWVSLGA
Trigger: CGCCCCCAGGCTGACCCAGCTGGATGTTGACAGCCACCTGGCCCAGTGCTTGGCCGAAAGCACAGAAGACGTGACGTGGTGAGCGCCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378543.2
ENST00000378546.9
ENST00000401813.7
ENST00000476803.1
ENST00000487186.5
CDS CCA 90 bp TCAGCGCCAGCGTGTAGCCTCCTCCCAGGATCCGGAGCAGGAGGGTaGCTGTCTTTTGCGTTCAATCCGCTGGGCTGCTGTGGGGTTCCC +
Preference number: 5 (lower is better)
Translates to: SAPACSLLPGSGAGG*LSFAFNPLGCCGVP
Trigger: GGGAACCCCACAGCAGCCCAGCGGATTGAACGCAAAAGACAGCCACCCTCCTGCTCCGGATCCTGGGAGGAGGCTACACGCTGGCGCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420964.1
CDS CCA 90 bp GGATGCAGCTGCGTCTGGGGCCTGAGCGGAGGGAAGATATCAGGCTaGGGCCGGCTGCTGGGCCTGTCCTCTCTGAGTTGCCTCAAATCC +
Preference number: 5 (lower is better)
Translates to: GCSCVWGLSGGKISG*GRLLGLSSLSCLKS
Trigger: GGATTTGAGGCAACTCAGAGAGGACAGGCCCAGCAGCCGGCCCCAGCCTGATATCTTCCCTCCGCTCAGGCCCCAGACGCAGCTGCATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514625.1
CDS-3UTR CAA 90 bp AACACAGAGACAGACAGGAGCCCGCCCTGCTTTAATGCGCATGCGGGGGAGCCGCTCTGCGCAGGGCTCTaGGATGGCGCTCACCACGTC +
Preference number: 5 (lower is better)
Translates to: NTETDRSPPCFNAHAGEPLCAGL*DGAHHV
Trigger: GACGTGGTGAGCGCCATCCAAGAGCCCTGCGCAGAG...CGGCTCCCCCGCATGCGCATTAAAGCAGGGCGGGCTCCTGTCTGTCTCTGTGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378543.2
ENST00000378546.9
CDS-3UTR CAA 90 bp ATCCGCGGGGACCCTGCCGAGGGGGCTGTCATGCGGTTTCCAAGGTGCACATTTAGGTGGGGGCGGGAGTaGAAGTACCTGGGGGCGAAC +
Preference number: 5 (lower is better)
Translates to: IRGDPAEGAVMRFPRCTFRWGRE*KYLGAN
Trigger: GTTCGCCCCCAGGTACTTCAACTCCCGCCCCCACCT...AAATGTGCACCTTGGAAACCGCATGACAGCCCCCTCGGCAGGGTCCCCGCGGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000400918.7
CDS-3UTR CAA 90 bp CGTCTTCTGTGCTTTCGGCCAAGCACTGGGCCAGGTGGCTGTCAACATCCAGCTGCCAGGGACAGACGCTaGCGCCGAGACCGCAGAGGG +
Preference number: 5 (lower is better)
Translates to: RLLCFRPSTGPGGCQHPAARDRR*RRDRRG
Trigger: CCCTCTGCGGTCTCGGCGCAAGCGTCTGTCCCTGGC...AGCTGGATGTTGACAGCCACCTGGCCCAGTGCTTGGCCGAAAGCACAGAAGACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428120.5
CDS-3UTR CAA 90 bp CGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCCTAAATACTGCCGTGTaGCCAGTAGCGTGCCGGTTA +
Preference number: 5 (lower is better)
Translates to: RAGGTCCCACVAADPRGPLNTAV*PVACRL
Trigger: TAACCGGCACGCTACTGGCAACACGGCAGTATTTAG...GGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CAA 90 bp AGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAGCAGAACAGTCCCTCACAGGTGGGGGCGGGAGTaGAAGTACCCCTCAGGTGAA +
Preference number: 5 (lower is better)
Translates to: RPQREASAGAAGSRTVPHRWGRE*KYPSGE
Trigger: TTCACCTGAGGGGTACTTCAACTCCCGCCCCCACCT...GTGAGGGACTGTTCTGCTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS TCA 90 bp GGTCCGGCGGAAAGGGTGTCCAGGAAAAGGTCTTGGGTCCGACAGTaGAGACTTCAGTGGGCTCCGGGCCGCACCTGGGCTCCTTGTCCT +
Preference number: 5 (lower is better)
Translates to: GPAERVSRKRSWVRQ*RLQWAPGRTWAPCP
Trigger: AGGACAAGGAGCCCAGGTGCGGCCCGGAGCCCACTGAAGTCTTCACTGTCGGACCCAAGACCTTTTCCTGGACACCCTTTCCGCCGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469733.5
CDS TCA 90 bp AGAGCCCACCCAGTGCCTTCTGAAGCCCCCGAGGGTCACTCAGTCTaGGACTTTCCGGCTTCTGCCCATCCTGGGAACCAGCCCCTCCCT +
Preference number: 5 (lower is better)
Translates to: RAHPVPSEAPEGHSV*DFPASAHPGNQPLP
Trigger: AGGGAGGGGCTGGTTCCCAGGATGGGCAGAAGCCGGAAAGTCTCAGACTGAGTGACCCTCGGGGGCTTCAGAAGGCACTGGGTGGGCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS TCA 90 bp CCACATTTCTCAGAAGGACTCCAGGATGCAGCTGCGTCTGGGGCCTaGGCGGAGGGAAGATATCAGGCTGGGGCCGGCTGCTGGGCCTGT +
Preference number: 5 (lower is better)
Translates to: PHFSEGLQDAAASGA*AEGRYQAGAGCWAC
Trigger: ACAGGCCCAGCAGCCGGCCCCAGCCTGATATCTTCCCTCCGCTCAGGCCCCAGACGCAGCTGCATCCTGGAGTCCTTCTGAGAAATGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514625.1
CDS GCA 90 bp TCCACCCCTTCCCATGTGGCTAAATGGCCCAGCACCCACACACGGTaGCCTGGCAGTGCTCACCTGCTGGCAAGGACAGCCAAAAGGCCC +
Preference number: 5 (lower is better)
Translates to: STPSHVAKWPSTHTR*PGSAHLLARTAKRP
Trigger: GGGCCTTTTGGCTGTCCTTGCCAGCAGGTGAGCACTGCCAGGGCACCGTGTGTGGGTGCTGGGCCATTTAGCCACATGGGAAGGGGTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401813.7
CDS GCA 90 bp ACCCTGTCTCTATGGAAACTCCCTGTCTTGGGGCCGCGCACACCATaGCTGGCAGGAGCTGGAGATGCAGCAGAGCAGACGCGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: TLSLWKLPVLGPRTP*LAGAGDAAEQTRLQ
Trigger: CTGCAGCCGCGTCTGCTCTGCTGCATCTCCAGCTCCTGCCAGGCATGGTGTGCGCGGCCCCAAGACAGGGAGTTTCCATAGAGACAGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469733.5
CDS GCA 90 bp GCGTCTGGGGCCTTTTGGAGGGAGTGGCCCAGCTCTCCCGGCCTTTaGCACCCGGCGTCCTGTCCCAGTTTATCTGTGTCCAGTCCGATT +
Preference number: 5 (lower is better)
Translates to: ASGAFWREWPSSPGL*HPASCPSLSVSSPI
Trigger: AATCGGACTGGACACAGATAAACTGGGACAGGACGCCGGGTGGCAAAGGCCGGGAGAGCTGGGCCACTCCCTCCAAAAGGCCCCAGACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469733.5
CDS GCA 90 bp CTGCCCTCAGACCAGTCCACGGCGCGCCGTTTTACCCTTGGGCTTTaGTGTGTCCCTTCCTTTGGCTCCTGTGCCCCGTCTGTGTGGCCA +
Preference number: 5 (lower is better)
Translates to: LPSDQSTARRFTLGL*CVPSFGSCAPSVWP
Trigger: TGGCCACACAGACGGGGCACAGGAGCCAAAGGAAGGGACACAGCAAAGCCCAAGGGTAAAACGGCGCGCCGTGGACTGGTCTGAGGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS CCA 90 bp CTGGCCCGTGGATGCCAGGCAGGCACGCCCACCCATAGCCAGATGTaGTGGCATTTATGGGATACGGGAGTGCCAGGCAGACAGGCTGTG +
Preference number: 5 (lower is better)
Translates to: LARGCQAGTPTHSQM*WHLWDTGVPGRQAV
Trigger: CACAGCCTGTCTGCCTGGCACTCCCGTATCCCATAAATGCCACCACATCTGGCTATGGGTGGGCGTGCCTGCCTGGCATCCACGGGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000401813.7
ENST00000487186.5
CDS CCA 90 bp TGCTTCAACTTTCTGAGTGACGTGCAGACCTTCACAGAGGAGCCGTaGGGTGGCTCCATCCAACGCCTCCCTCGCTGCCCCGGTGCAGGC +
Preference number: 5 (lower is better)
Translates to: CFNFLSDVQTFTEEP*GGSIQRLPRCPGAG
Trigger: GCCTGCACCGGGGCAGCGAGGGAGGCGTTGGATGGAGCCACCCCACGGCTCCTCTGTGAAGGTCTGCACGTCACTCAGAAAGTTGAAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469733.5
ENST00000514625.1
CDS CCA 90 bp GCAGGTCCCACATTTCTCAGAAGGACTCCAGGATGCAGCTGCGTCTaGGGCCTGAGCGGAGGGAAGATATCAGGCTGGGGCCGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: AGPTFLRRTPGCSCV*GLSGGKISGWGRLL
Trigger: CAGCAGCCGGCCCCAGCCTGATATCTTCCCTCCGCTCAGGCCCCAGACGCAGCTGCATCCTGGAGTCCTTCTGAGAAATGTGGGACCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514625.1
CDS-3UTR CAA 90 bp TCACACCTGGGCCCGGGCAGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCTCTCTCCAGTGGGCGTaGGGGGAGGATTCTTATGCG +
Preference number: 5 (lower is better)
Translates to: SHLGPGRPASCWRNLLLCSLQWA*GEDSYA
Trigger: CGCATAAGAATCCTCCCCCAACGCCCACTGGAGAGA...GCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCCCGGGCCCAGGTGTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CAA 90 bp AGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAGCAACGGTCTGGACAACTTaGACACACAGTTCACCAGCG +
Preference number: 5 (lower is better)
Translates to: RRLRRDRRGKRQRALLGATVWTT*THSSPA
Trigger: CGCTGGTGAACTGTGTGTCAAAGTTGTCCAGACCGT...TGCTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CAA 90 bp GGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAGTGCCGGTTACCAGTTaGGCCGTTCTTGTACACAAT +
Preference number: 5 (lower is better)
Translates to: GGTCCCACVAADPRGPCRVPVTS*AVLVHN
Trigger: ATTGTGTACAAGAACGGCCAAACTGGTAACCGGCAC...TCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CAA 90 bp TCACACCTGGGCCCGGGCAGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCTGTTGGCTGCCAACTTaGGACTCCGGTGCCTTCGCA +
Preference number: 5 (lower is better)
Translates to: SHLGPGRPASCWRNLLLCCWLPT*DSGAFA
Trigger: TGCGAAGGCACCGGAGTCCAAAGTTGGCAGCCAACA...GCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCCCGGGCCCAGGTGTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428120.5
CDS TCA 90 bp GCCTGTGGCGGAAGAGCTTTGTCCTGGCCTGATCTGCCCTGTCCGTaGCGCTTCTGCTCAGTAGCTGAGCACGCCCTGTGGTGTGGACAG +
Preference number: 5 (lower is better)
Translates to: ACGGRALSWPDLPCP*RFCSVAEHALWCGQ
Trigger: CTGTCCACACCACAGGGCGTGCTCAGCTACTGAGCAGAAGCGTCACGGACAGGGCAGATCAGGCCAGGACAAAGCTCTTCCGCCACAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS TCA 90 bp GTGTCTCAACAAGCCTCTCTATGGGATTCTGGCGCCTGCTCAGCTTaGGAACGCGCTCATCGTGGAGCCCGGCAGACAGGCGGCCTGACC +
Preference number: 5 (lower is better)
Translates to: VSQQASLWDSGACSA*ERAHRGARQTGGLT
Trigger: GGTCAGGCCGCCTGTCTGCCGGGCTCCACGATGAGCGCGTTCTCAAGCTGAGCAGGCGCCAGAATCCCATAGAGAGGCTTGTTGAGACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS CCA 90 bp CACCACGTCACGTCTTCTGTGCTTTCGGCCAAGCACTGGGCCAGGTaGCTGTCAACATCCAGCTGGGTCAGCCTGGGGGCGAACTCCTTC +
Preference number: 5 (lower is better)
Translates to: HHVTSSVLSAKHWAR*LSTSSWVSLGANSF
Trigger: GAAGGAGTTCGCCCCCAGGCTGACCCAGCTGGATGTTGACAGCCACCTGGCCCAGTGCTTGGCCGAAAGCACAGAAGACGTGACGTGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378543.2
ENST00000378546.9
ENST00000401813.7
ENST00000476803.1
ENST00000487186.5
CDS CCA 90 bp GCCCGTGGATGCCAGGCAGGCACGCCCACCCATAGCCAGATGTGGTaGCATTTATGGGATACGGGAGTGCCAGGCAGACAGGCTGTGAGA +
Preference number: 5 (lower is better)
Translates to: ARGCQAGTPTHSQMW*HLWDTGVPGRQAVR
Trigger: TCTCACAGCCTGTCTGCCTGGCACTCCCGTATCCCATAAATGCCACCACATCTGGCTATGGGTGGGCGTGCCTGCCTGGCATCCACGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000401813.7
ENST00000487186.5
CDS CCA 90 bp CAAGGCCTGGGCGGCAGGAAAGGGAGAGATGACGTCATTGCCGCCTaGAATCTGCTGTTTGGAGGCGTCGCCATGGAGACCGGAAGGCTC +
Preference number: 5 (lower is better)
Translates to: QGLGGRKGRDDVIAA*NLLFGGVAMETGRL
Trigger: GAGCCTTCCGGTCTCCATGGCGACGCCTCCAAACAGCAGATTCCAGGCGGCAATGACGTCATCTCTCCCTTTCCTGCCGCCCAGGCCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487186.5
CDS CCA 90 bp TGCTTCAACTTTCTGAGTGACGTGCAGACCTTCACAGAGGAGCCGTaGGGTGGCTCCATCCAACGCCTCCCTCGCTGCCCCTGGGGTGGA +
Preference number: 5 (lower is better)
Translates to: CFNFLSDVQTFTEEP*GGSIQRLPRCPWGG
Trigger: TCCACCCCAGGGGCAGCGAGGGAGGCGTTGGATGGAGCCACCCCACGGCTCCTCTGTGAAGGTCTGCACGTCACTCAGAAAGTTGAAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487186.5
CDS CCA 90 bp CACGGCGCGCCGTTTTACCCTTGGGCTTTGCTGTGTCCCTTCCTTTaGCTCCTGTGCCCCGTCTGTGTGGCCACTGCAACCCTCAAGTCC +
Preference number: 5 (lower is better)
Translates to: HGAPFYPWALLCPFL*LLCPVCVATATLKS
Trigger: GGACTTGAGGGTTGCAGTGGCCACACAGACGGGGCACAGGAGCCAAAGGAAGGGACACAGCAAAGCCCAAGGGTAAAACGGCGCGCCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS CCA 90 bp ACAGCCTCTGCCCTCAGACCAGTCCACGGCGCGCCGTTTTACCCTTaGGCTTTGCTGTGTCCCTTCCTTTGGCTCCTGTGCCCCGTCTGT +
Preference number: 5 (lower is better)
Translates to: TASALRPVHGAPFYP*ALLCPFLWLLCPVC
Trigger: ACAGACGGGGCACAGGAGCCAAAGGAAGGGACACAGCAAAGCCCAAGGGTAAAACGGCGCGCCGTGGACTGGTCTGAGGGCAGAGGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS-3UTR CAA 90 bp ACCTGGGCCCGGGCAGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCCAGGAAAAGGTCTaGGGTCCGACAGTGAAGACT +
Preference number: 5 (lower is better)
Translates to: TWARAGQLRAGGTCCCACVQEKV*GPTVKT
Trigger: AGTCTTCACTGTCGGACCCAAGACCTTTTCCTGGAC...GCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCCCGGGCCCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400918.7
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CAA 90 bp GTCACGTCTTCTGTGCTTTCGGCCAAGCACTGGGCCAGGTGGCTGTCAACATCCCTCTGCGCAGGGCTCTaGGATGGCGCTCACCACGTC +
Preference number: 5 (lower is better)
Translates to: VTSSVLSAKHWARWLSTSLCAGL*DGAHHV
Trigger: GACGTGGTGAGCGCCATCCAAGAGCCCTGCGCAGAG...GGATGTTGACAGCCACCTGGCCCAGTGCTTGGCCGAAAGCACAGAAGACGTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378543.2
ENST00000440825.6
CDS-3UTR CAA 90 bp CGTCACGTCTTCTGTGCTTTCGGCCAAGCACTGGGCCAGGTGGCTGTCAACATCCTCTGCGCAGGGCTCTaGGATGGCGCTCACCACGTC +
Preference number: 5 (lower is better)
Translates to: RHVFCAFGQALGQVAVNILCAGL*DGAHHV
Trigger: GACGTGGTGAGCGCCATCCAAGAGCCCTGCGCAGAG...GATGTTGACAGCCACCTGGCCCAGTGCTTGGCCGAAAGCACAGAAGACGTGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378543.2
ENST00000440825.6
CDS-3UTR CAA 90 bp GCTGTGAGAAATGGGAGGCCTCCTGGCAGCTCCACTCCCCAGACCCGCCTCTGCATTCCCGAGCTGTTTTaGCTTCTGGGGGCGAACTCC +
Preference number: 5 (lower is better)
Translates to: AVRNGRPPGSSTPQTRLCIPELF*LLGANS
Trigger: GGAGTTCGCCCCCAGAAGCAAAAACAGCTCGGGAAT...GCAGAGGCGGGTCTGGGGAGTGGAGCTGCCAGGAGGCCTCCCATTTCTCACAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000420515.1
CDS GCA 90 bp GTGAGCTCAGATGCTGATTGGTCTACCCAGGAGGGCGGTCCTGTGTaGTCTGTTCCCTGGGAAGCCTCTCAGAGTGCGCGGCACCAAGGA +
Preference number: 5 (lower is better)
Translates to: VSSDADWSTQEGGPV*SVPWEASQSARHQG
Trigger: TCCTTGGTGCCGCGCACTCTGAGAGGCTTCCCAGGGAACAGAGCACACAGGACCGCCCTCCTGGGTAGACCAATCAGCATCTGAGCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000401813.7
ENST00000487186.5
CDS GCA 90 bp CCGGGGCTGAGTGGGCGGCTTCAGCCTAGACTTGGGCCTAGATCTTaGTGGAGGCCAAGTGGTCAGTGTCCCATCAGAGTGACCATCCCT +
Preference number: 5 (lower is better)
Translates to: PGLSGRLQPRLGPRS*WRPSGQCPIRVTIP
Trigger: AGGGATGGTCACTCTGATGGGACACTGACCACTTGGCCTCCAGCAAGATCTAGGCCCAAGTCTAGGCTGAAGCCGCCCACTCAGCCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS CCA 90 bp AGACACGTCACGTCTTCTGTGCTTTCGGCCAAGCACTGGGCCAGGTaGCTGTCAACATCCAGCTGGGTCAGCCTGGGGGCGAACTCCTTC +
Preference number: 5 (lower is better)
Translates to: RHVTSSVLSAKHWAR*LSTSSWVSLGANSF
Trigger: GAAGGAGTTCGCCCCCAGGCTGACCCAGCTGGATGTTGACAGCCACCTGGCCCAGTGCTTGGCCGAAAGCACAGAAGACGTGACGTGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414253.5
CDS CCA 90 bp GGGCTTTGCTGTGTCCCTTCCTTTGGCTCCTGTGCCCCGTCTGTGTaGCCACTGCAACCCTCAAGTCCCCCTCTCCAGACCATAGCTGGA +
Preference number: 5 (lower is better)
Translates to: GLCCVPSFGSCAPSV*PLQPSSPPLQTIAG
Trigger: TCCAGCTATGGTCTGGAGAGGGGGACTTGAGGGTTGCAGTGGCCACACAGACGGGGCACAGGAGCCAAAGGAAGGGACACAGCAAAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS CCA 90 bp GGCTGGGCAGTGGATGTGCAGCTCACGTCAGAGAATTGGTGTTTCTaGCGAGGAGGGACCAAGCCTCACCACGGAGAAGGACGCCGTCAC +
Preference number: 5 (lower is better)
Translates to: GWAVDVQLTSENWCF*RGGTKPHHGEGRRH
Trigger: GTGACGGCGTCCTTCTCCGTGGTGAGGCTTGGTCCCTCCTCGCCAGAAACACCAATTCTCTGACGTGAGCTGCACATCCACTGCCCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS CCA 90 bp TGGGGGTGGGGAAGCTGTGTCTCAACAAGCCTCTCTATGGGATTCTaGCGCCTGCTCAGCTTGAGAACGCGCTCATCGTGGAGCCCGGCA +
Preference number: 5 (lower is better)
Translates to: WGWGSCVSTSLSMGF*RLLSLRTRSSWSPA
Trigger: TGCCGGGCTCCACGATGAGCGCGTTCTCAAGCTGAGCAGGCGCCAGAATCCCATAGAGAGGCTTGTTGAGACACAGCTTCCCCACCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS CCA 90 bp TCTGAGTTGCCTCAAATCCCCTGTTCCTTGAGCGGTCCTGGAGCCTaGCCTCAGGCCTCAGGGCACCACACTACTTGCCTCCAGGGACCA +
Preference number: 5 (lower is better)
Translates to: SELPQIPCSLSGPGA*PQASGHHTTCLQGP
Trigger: TGGTCCCTGGAGGCAAGTAGTGTGGTGCCCTGAGGCCTGAGGCCAGGCTCCAGGACCGCTCAAGGAACAGGGGATTTGAGGCAACTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514625.1
CDS-3UTR CAA 90 bp CGGGCAGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGTATATCAACCCATTATaGCTGTCCACCGAGGAGTCG +
Preference number: 5 (lower is better)
Translates to: RAGQLRAGGTCCCACVAAYINPL*LSTEES
Trigger: CGACTCCTCGGTGGACAGCAATAATGGGTTGATATA...CGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CAA 90 bp GCGGATCCGCGGGGACCCTGCCGAGGGGGCTGTCATGCGGTTTCCAAGGTGCACTATATCAACCCATTATaGCTGTCCACCGAGGAGTCG +
Preference number: 5 (lower is better)
Translates to: ADPRGPCRGGCHAVSKVHYINPL*LSTEES
Trigger: CGACTCCTCGGTGGACAGCAATAATGGGTTGATATA...GTGCACCTTGGAAACCGCATGACAGCCCCCTCGGCAGGGTCCCCGCGGATCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CAA 90 bp CTTCTGTGCTTTCGGCCAAGCACTGGGCCAGGTGGCTGTCAACATCCAGCTGGGGAAAACTCTGGTGACTaGGGGGCTGCACAGTGGGCC +
Preference number: 5 (lower is better)
Translates to: LLCFRPSTGPGGCQHPAGENSGD*GAAQWA
Trigger: GGCCCACTGTGCAGCCCCCAAGTCACCAGAGTTTTC...CCCAGCTGGATGTTGACAGCCACCTGGCCCAGTGCTTGGCCGAAAGCACAGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000428120.5
CDS-3UTR CAA 90 bp GGGCCCGGGCAGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGTCACGACGGTGTCTTTaGGAAGTGGTTCTCGAAAAC +
Preference number: 5 (lower is better)
Translates to: GPGQASFVLEELAAVPASSRRCL*EVVLEN
Trigger: GTTTTCGAGAACCACTTCCAAAAGACACCGTCGTGA...CGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCCCGGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CAA 90 bp GACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAGCAGTTGTTGTTGTTGTTGTaGGCTGCCAACTTTGGACTC +
Preference number: 5 (lower is better)
Translates to: DACAETAEGSVSGRCWEQLLLLL*AANFGL
Trigger: GAGTCCAAAGTTGGCAGCCAACAACAACAACAACAA...CTGCTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428120.5
CDS TCA 90 bp CAGCCCAGGCTTCTCTCTCCACCCCACTGCCCTGCTGGGAAATTGTaGGCTCAGATGCTGATTGGTCTACCCAGGAGGGCGGTCCTGTGT +
Preference number: 5 (lower is better)
Translates to: QPRLLSPPHCPAGKL*AQMLIGLPRRAVLC
Trigger: ACACAGGACCGCCCTCCTGGGTAGACCAATCAGCATCTGAGCTCACAATTTCCCAGCAGGGCAGTGGGGTGGAGAGAGAAGCCTGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000401813.7
ENST00000487186.5
CDS GCA 90 bp CCGTTTTACCCTTGGGCTTTGCTGTGTCCCTTCCTTTGGCTCCTGTaGCCCGTCTGTGTGGCCACTGCAACCCTCAAGTCCCCCTCTCCA +
Preference number: 5 (lower is better)
Translates to: PFYPWALLCPFLWLL*PVCVATATLKSPSP
Trigger: TGGAGAGGGGGACTTGAGGGTTGCAGTGGCCACACAGACGGGGCACAGGAGCCAAAGGAAGGGACACAGCAAAGCCCAAGGGTAAAACGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS CCA 90 bp TGCCAGGCAGGCACGCCCACCCATAGCCAGATGTGGTGGCATTTATaGGATACGGGAGTGCCAGGCAGACAGGCTGTGAGAGACAGTTGC +
Preference number: 5 (lower is better)
Translates to: CQAGTPTHSQMWWHL*DTGVPGRQAVRDSC
Trigger: GCAACTGTCTCTCACAGCCTGTCTGCCTGGCACTCCCGTATCCCATAAATGCCACCACATCTGGCTATGGGTGGGCGTGCCTGCCTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000401813.7
ENST00000487186.5
CDS CCA 90 bp ATCCATGAAAGACACGTCACGTCTTCTGTGCTTTCGGCCAAGCACTaGGCCAGGTGGCTGTCAACATCCAGCTGGGTCAGCCTGGGGGCG +
Preference number: 5 (lower is better)
Translates to: IHERHVTSSVLSAKH*ARWLSTSSWVSLGA
Trigger: CGCCCCCAGGCTGACCCAGCTGGATGTTGACAGCCACCTGGCCCAGTGCTTGGCCGAAAGCACAGAAGACGTGACGTGTCTTTCATGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414253.5
CDS CCA 90 bp GGGCTGAGTGGGCGGCTTCAGCCTAGACTTGGGCCTAGATCTTGCTaGAGGCCAAGTGGTCAGTGTCCCATCAGAGTGACCATCCCTCAC +
Preference number: 5 (lower is better)
Translates to: GLSGRLQPRLGPRSC*RPSGQCPIRVTIPH
Trigger: GTGAGGGATGGTCACTCTGATGGGACACTGACCACTTGGCCTCCAGCAAGATCTAGGCCCAAGTCTAGGCTGAAGCCGCCCACTCAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS-3UTR CAA 90 bp CAGAGACAGACAGGAGCCCGCCCTGCTTTAATGCGCATGCGGGGGAGCCGAGAGGTCCAGGAAAAGGTCTaGGGTCCGACAGTGAAGACT +
Preference number: 5 (lower is better)
Translates to: QRQTGARPALMRMRGSREVQEKV*GPTVKT
Trigger: AGTCTTCACTGTCGGACCCAAGACCTTTTCCTGGAC...CTCTCGGCTCCCCCGCATGCGCATTAAAGCAGGGCGGGCTCCTGTCTGTCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378543.2
ENST00000378546.9
CDS-3UTR CAA 90 bp GCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCTATATCAACCCATTATaGCTGTCCACCGAGGAGTCG +
Preference number: 5 (lower is better)
Translates to: ASFVLEELAAVPASRRIRYINPL*LSTEES
Trigger: CGACTCCTCGGTGGACAGCAATAATGGGTTGATATA...GCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CAA 90 bp TCTCCTATTGTTTTTCCAAGCTGGAGAAGAAGCAGGCGCTCCCTCCATTCCAGCTGCCACGCAGCCCTCTaGGCCAGGCGCAGAGACCCC +
Preference number: 5 (lower is better)
Translates to: SPIVFPSWRRSRRSLHSSCHAAL*ARRRDP
Trigger: GGGGTCTCTGCGCCTGGCCAAGAGGGCTGCGTGGCA...GCTGGAATGGAGGGAGCGCCTGCTTCTTCTCCAGCTTGGAAAAACAATAGGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS TCA 90 bp TCTCTCCACCCCACTGCCCTGCTGGGAAATTGTGAGCTCAGATGCTaGTTGGTCTACCCAGGAGGGCGGTCCTGTGTGCTCTGTTCCCTG +
Preference number: 5 (lower is better)
Translates to: SLHPTALLGNCELRC*LVYPGGRSCVLCSL
Trigger: CAGGGAACAGAGCACACAGGACCGCCCTCCTGGGTAGACCAATCAGCATCTGAGCTCACAATTTCCCAGCAGGGCAGTGGGGTGGAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000401813.7
ENST00000487186.5
CDS TCA 90 bp GAACGTTTCAGCTGTGGGAGTTTGCATCCCAGGCAGAGCAGAAGGTaGTCGAGTGGGTGGGGGCATCAGAGCCACCCATCTCCTACTCCC +
Preference number: 5 (lower is better)
Translates to: ERFSCGSLHPRQSRR*SSGWGHQSHPSPTP
Trigger: GGGAGTAGGAGATGGGTGGCTCTGATGCCCCCACCCACTCGATCACCTTCTGCTCTGCCTGGGATGCAAACTCCCACAGCTGAAACGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401813.7
CDS TCA 90 bp AGGGCTTTAAAAGCCAGCGCTGAGCTCGGCCACCTCTTGACCTTCTaGACGGCTGTGGTTTCCAAACACGGATGGATAACCGGGCCGGGC +
Preference number: 5 (lower is better)
Translates to: RALKASAELGHLLTF*TAVVSKHGWITGPG
Trigger: GCCCGGCCCGGTTATCCATCCGTGTTTGGAAACCACAGCCGTTCAGAAGGTCAAGAGGTGGCCGAGCTCAGCGCTGGCTTTTAAAGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS GCA 90 bp GCTGTGGCGCACAGGTTTCCACTTGTCATAGGAAACTGTGCTTGGTaGATCCCCTGTGCAGCCGGCTGTGAACTGTGGGCTCCAACCCTG +
Preference number: 5 (lower is better)
Translates to: AVAHRFPLVIGNCAW*IPCAAGCELWAPTL
Trigger: CAGGGTTGGAGCCCACAGTTCACAGCCGGCTGCACAGGGGATGCACCAAGCACAGTTTCCTATGACAAGTGGAAACCTGTGCGCCACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469733.5
ENST00000514625.1
CDS GCA 90 bp CCTGTGGCGCACAGGTTTCCACTTGTCATAGGAAACTGTGCTTGGTaGATCCCCTGTGCAGCCGGCTGTGAACTGTGGGCTCCAACCCTG +
Preference number: 5 (lower is better)
Translates to: PVAHRFPLVIGNCAW*IPCAAGCELWAPTL
Trigger: CAGGGTTGGAGCCCACAGTTCACAGCCGGCTGCACAGGGGATGCACCAAGCACAGTTTCCTATGACAAGTGGAAACCTGTGCGCCACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487186.5
CDS CCA 90 bp TCCACCCCACTGCCCTGCTGGGAAATTGTGAGCTCAGATGCTGATTaGTCTACCCAGGAGGGCGGTCCTGTGTGCTCTGTTCCCTGGGAA +
Preference number: 5 (lower is better)
Translates to: STPLPCWEIVSSDAD*STQEGGPVCSVPWE
Trigger: TTCCCAGGGAACAGAGCACACAGGACCGCCCTCCTGGGTAGACCAATCAGCATCTGAGCTCACAATTTCCCAGCAGGGCAGTGGGGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000401813.7
ENST00000487186.5
CDS-3UTR CAA 90 bp TATTGCTGTCCACCGAGGAGTCGGTGTGAGGCCGCGTGCGTCTCTGTCGTGGACGTCCAGGAAAAGGTCTaGGGTCCGACAGTGAAGACT +
Preference number: 5 (lower is better)
Translates to: YCCPPRSRCEAACVSVVDVQEKV*GPTVKT
Trigger: AGTCTTCACTGTCGGACCCAAGACCTTTTCCTGGAC...GTCCACGACAGAGACGCACGCGGCCTCACACCGACTCCTCGGTGGACAGCAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CAA 90 bp TCAACCCATTATTGCTGTCCACCGAGGAGTCGGTGTGAGGCCGCGTGCGTCTCTTCTCTCCAGTGGGCGTaGGGGGAGGATTCTTATGCG +
Preference number: 5 (lower is better)
Translates to: STHYCCPPRSRCEAACVSSLQWA*GEDSYA
Trigger: CGCATAAGAATCCTCCCCCAACGCCCACTGGAGAGA...AGAGACGCACGCGGCCTCACACCGACTCCTCGGTGGACAGCAATAATGGGTTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CAA 90 bp GCTGGGAGCAGAACAGTCCCTCACACCTGGGCCCGGGCAGGCCAGCTTCGTGCTCTGACCCTTCTCCTATaGTTTTTCCAAGCTGGAGAA +
Preference number: 5 (lower is better)
Translates to: AGSRTVPHTWARAGQLRALTLLL*FFQAGE
Trigger: TTCTCCAGCTTGGAAAAACAATAGGAGAAGGGTCAG...AGCACGAAGCTGGCCTGCCCGGGCCCAGGTGTGAGGGACTGTTCTGCTCCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CAA 90 bp CGGCTGGTGGCTAAATACTGCCGTGTTGCCAGTAGCGTGCCGGTTACCAGTTTGGAAAACTCTGGTGACTaGGGGGCTGCACAGTGGGCC +
Preference number: 5 (lower is better)
Translates to: RLVAKYCRVASSVPVTSLENSGD*GAAQWA
Trigger: GGCCCACTGTGCAGCCCCCAAGTCACCAGAGTTTTC...CAAACTGGTAACCGGCACGCTACTGGCAACACGGCAGTATTTAGCCACCAGCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CAA 90 bp AGTGAGGCCTGGTGCACAGGTGTGGAAATTGCCACGCAGCCCTCTTGGCCAGGCCTAAATACTGCCGTGTaGCCAGTAGCGTGCCGGTTA +
Preference number: 5 (lower is better)
Translates to: SEAWCTGVEIATQPSWPGLNTAV*PVACRL
Trigger: TAACCGGCACGCTACTGGCAACACGGCAGTATTTAG...GCCTGGCCAAGAGGGCTGCGTGGCAATTTCCACACCTGTGCACCAGGCCTCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CAA 90 bp CGTCACGTCTTCTGTGCTTTCGGCCAAGCACTGGGCCAGGTGGCTGTCAACATCTGTTGGCTGCCAACTTaGGACTCCGGTGCCTTCGCA +
Preference number: 5 (lower is better)
Translates to: RHVFCAFGQALGQVAVNICWLPT*DSGAFA
Trigger: TGCGAAGGCACCGGAGTCCAAAGTTGGCAGCCAACA...GATGTTGACAGCCACCTGGCCCAGTGCTTGGCCGAAAGCACAGAAGACGTGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428120.5
ENST00000440825.6
CDS-3UTR CAA 90 bp AGCGTGTCCGGGCGCCGCACTCTGCGCAGGGCTCTTGGATGGCGCTCACCACGTCTTTTGTTGTTGTTGTaGTTGGCTGCCAACTTTGGA +
Preference number: 5 (lower is better)
Translates to: SVSGRRTLRRALGWRSPRLLLLL*LAANFG
Trigger: TCCAAAGTTGGCAGCCAACAACAACAACAACAAAAG...ACGTGGTGAGCGCCATCCAAGAGCCCTGCGCAGAGTGCGGCGCCCGGACACGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440825.6
CDS TCA 90 bp ACTGGCATCCTCAGAGTCACCCAAATGTTCATCTCTGCCCAGCGCTaGCACCCTGCAAATCAGGCTAAGACAGCGGTGACGGGCCCTGAG +
Preference number: 5 (lower is better)
Translates to: TGILRVTQMFISAQR*HPANQAKTAVTGPE
Trigger: CTCAGGGCCCGTCACCGCTGTCTTAGCCTGATTTGCAGGGTGTCAGCGCTGGGCAGAGATGAACATTTGGGTGACTCTGAGGATGCCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401813.7
CDS TCA 90 bp TTGCCACCCGGCGTCCTGTCCCAGTTTATCTGTGTCCAGTCCGATTaGTGGGCTCATGGATTGGAAAGCTGTGACAGACGCCCTGGGCGT +
Preference number: 5 (lower is better)
Translates to: LPPGVLSQFICVQSD*WAHGLESCDRRPGR
Trigger: ACGCCCAGGGCGTCTGTCACAGCTTTCCAATCCATGAGCCCATCAATCGGACTGGACACAGATAAACTGGGACAGGACGCCGGGTGGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469733.5
CDS GCA 90 bp CCTGTGCAGCCGGCTGTGAACTGTGGGCTCCAACCCTGCTTGGTTTaGTTCAACTTTCTGAGTGACGTGCAGACCTTCACAGAGGAGCCG +
Preference number: 5 (lower is better)
Translates to: PVQPAVNCGLQPCLV*FNFLSDVQTFTEEP
Trigger: CGGCTCCTCTGTGAAGGTCTGCACGTCACTCAGAAAGTTGAAGCAAACCAAGCAGGGTTGGAGCCCACAGTTCACAGCCGGCTGCACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000469733.5
ENST00000487186.5
ENST00000514625.1
CDS CCA 90 bp CCTCTCCAACTCCTTCCACCGCGGAAGAACAAGTGTCCCAGCCACTaGCATCCTCAGAGTCACCCAAATGTTCATCTCTGCCCAGCGCTG +
Preference number: 5 (lower is better)
Translates to: PLQLLPPRKNKCPSH*HPQSHPNVHLCPAL
Trigger: CAGCGCTGGGCAGAGATGAACATTTGGGTGACTCTGAGGATGCCAGTGGCTGGGACACTTGTTCTTCCGCGGTGGAAGGAGTTGGAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401813.7
CDS CCA 90 bp TCACCTGTGGCGCACAGGTTTCCACTTGTCATAGGAAACTGTGCTTaGTGCATCCCCTGTGCAGCCGGCTGTGAACTGTGGGCTCCAACC +
Preference number: 5 (lower is better)
Translates to: SPVAHRFPLVIGNCA*CIPCAAGCELWAPT
Trigger: GGTTGGAGCCCACAGTTCACAGCCGGCTGCACAGGGGATGCACCAAGCACAGTTTCCTATGACAAGTGGAAACCTGTGCGCCACAGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487186.5
CDS-3UTR CAA 90 bp CGGGCAGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGCAGAGTTCGAAGGCTTaGAGTATATCAACCCATTAT +
Preference number: 5 (lower is better)
Translates to: RAGQLRAGGTCCCACVAAQSSKA*SISTHY
Trigger: ATAATGGGTTGATATACTCAAAGCCTTCGAACTCTG...CGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CAA 90 bp GGATTCTTATGCGAACGTGACTCCGCTTCCCCCAAGGGAATGAACACACGGTCAGGCCGCTCCACCCCATaGTGCGGCTGGTGGCTAAAT +
Preference number: 5 (lower is better)
Translates to: GFLCERDSASPKGMNTRSGRSTP*CGWWLN
Trigger: ATTTAGCCACCAGCCGCACAATGGGGTGGAGCGGCC...TGACCGTGTGTTCATTCCCTTGGGGGAAGCGGAGTCACGTTCGCATAAGAATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CAA 90 bp CGCGGAGCTGACCCTTCTCCTATTGTTTTTCCAAGCTGGAGAAGAAGCAGGCGCGCACAGGTGTGGAAATaGCCACGCAGCCCTCTTGGC +
Preference number: 5 (lower is better)
Translates to: RGADPSPIVFPSWRRSRRAQVWK*PRSPLG
Trigger: GCCAAGAGGGCTGCGTGGCAATTTCCACACCTGTGC...GCGCCTGCTTCTTCTCCAGCTTGGAAAAACAATAGGAGAAGGGTCAGCTCCGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CAA 90 bp GGAGAACACCAAGGCTGTGAGAAATGGGAGGCCTCCTGGCAGCTCCACTCCCCATGTCAAATCCAGCATTaGACGGTCCTCTGGGTGACC +
Preference number: 5 (lower is better)
Translates to: GEHQGCEKWEASWQLHSPCQIQH*TVLWVT
Trigger: GGTCACCCAGAGGACCGTCAAATGCTGGATTTGACA...TGGGGAGTGGAGCTGCCAGGAGGCCTCCCATTTCTCACAGCCTTGGTGTTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420515.1
CDS TCA 90 bp TGTGGTGGCATTTATGGGATACGGGAGTGCCAGGCAGACAGGCTGTaGGAGACAGTTGCCTGGGAAACATCGCCAGATCTTTGGGGCAGC +
Preference number: 5 (lower is better)
Translates to: CGGIYGIRECQADRL*ETVAWETSPDLWGS
Trigger: GCTGCCCCAAAGATCTGGCGATGTTTCCCAGGCAACTGTCTCTCACAGCCTGTCTGCCTGGCACTCCCGTATCCCATAAATGCCACCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000401813.7
ENST00000487186.5
CDS TCA 90 bp GAACTGTGGGCTCCAACCCTGCTTGGTTTGCTTCAACTTTCTGAGTaGCGTGCAGACCTTCACAGAGGAGCCGTGGGGTGGCTCCATCCA +
Preference number: 5 (lower is better)
Translates to: ELWAPTLLGLLQLSE*RADLHRGAVGWLHP
Trigger: TGGATGGAGCCACCCCACGGCTCCTCTGTGAAGGTCTGCACGTCACTCAGAAAGTTGAAGCAAACCAAGCAGGGTTGGAGCCCACAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000469733.5
ENST00000487186.5
ENST00000514625.1
CDS GCA 90 bp GGTGCATCCCCTGTGCAGCCGGCTGTGAACTGTGGGCTCCAACCCTaGTTGGTTTGCTTCAACTTTCTGAGTGACGTGCAGACCTTCACA +
Preference number: 5 (lower is better)
Translates to: GASPVQPAVNCGLQP*LVCFNFLSDVQTFT
Trigger: TGTGAAGGTCTGCACGTCACTCAGAAAGTTGAAGCAAACCAAGCAGGGTTGGAGCCCACAGTTCACAGCCGGCTGCACAGGGGATGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000469733.5
ENST00000487186.5
ENST00000514625.1
CDS CCA 90 bp TTTGCTGTGGCGCACAGGTTTCCACTTGTCATAGGAAACTGTGCTTaGTGCATCCCCTGTGCAGCCGGCTGTGAACTGTGGGCTCCAACC +
Preference number: 5 (lower is better)
Translates to: FAVAHRFPLVIGNCA*CIPCAAGCELWAPT
Trigger: GGTTGGAGCCCACAGTTCACAGCCGGCTGCACAGGGGATGCACCAAGCACAGTTTCCTATGACAAGTGGAAACCTGTGCGCCACAGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469733.5
ENST00000514625.1
CDS-3UTR CAA 90 bp CGTCACGTCTTCTGTGCTTTCGGCCAAGCACTGGGCCAGGTGGCTGTCAACATCACGGTCTGGACAACTTaGACACACAGTTCACCAGCG +
Preference number: 5 (lower is better)
Translates to: RHVFCAFGQALGQVAVNITVWTT*THSSPA
Trigger: CGCTGGTGAACTGTGTGTCAAAGTTGTCCAGACCGT...GATGTTGACAGCCACCTGGCCCAGTGCTTGGCCGAAAGCACAGAAGACGTGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428120.5
CDS-3UTR CAA 90 bp CAATCTGGTAGGGATGATGCCCGCGCGGAGCTGACCCTTCTCCTATTGTTTTTCAGGTGGGGGCGGGAGTaGAAGTACCCCTCAGGTGAA +
Preference number: 5 (lower is better)
Translates to: QSGRDDARAELTLLLLFFRWGRE*KYPSGE
Trigger: TTCACCTGAGGGGTACTTCAACTCCCGCCCCCACCT...GAAAAACAATAGGAGAAGGGTCAGCTCCGCGCGGGCATCATCCCTACCAGATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS TCA 90 bp CTGGGCCACCTTTCCAGTGTGAAACAGGGCTTTAAAAGCCAGCGCTaGGCTCGGCCACCTCTTGACCTTCTGAACGGCTGTGGTTTCCAA +
Preference number: 5 (lower is better)
Translates to: LGHLSSVKQGFKSQR*ARPPLDLLNGCGFQ
Trigger: TTGGAAACCACAGCCGTTCAGAAGGTCAAGAGGTGGCCGAGCTCAGCGCTGGCTTTTAAAGCCCTGTTTCACACTGGAAAGGTGGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS CCA 90 bp AGTAAACATGGCTGGGCAGTGGATGTGCAGCTCACGTCAGAGAATTaGTGTTTCTGGCGAGGAGGGACCAAGCCTCACCACGGAGAAGGA +
Preference number: 5 (lower is better)
Translates to: SKHGWAVDVQLTSEN*CFWRGGTKPHHGEG
Trigger: TCCTTCTCCGTGGTGAGGCTTGGTCCCTCCTCGCCAGAAACACCAATTCTCTGACGTGAGCTGCACATCCACTGCCCAGCCATGTTTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS-3UTR CAA 90 bp ACCCTGCCGAGGGGGCTGTCATGCGGTTTCCAAGGTGCACATTTTCCACGGAAAGTCCAGGAAAAGGTCTaGGGTCCGACAGTGAAGACT +
Preference number: 5 (lower is better)
Translates to: TLPRGLSCGFQGAHFPRKVQEKV*GPTVKT
Trigger: AGTCTTCACTGTCGGACCCAAGACCTTTTCCTGGAC...TTTCCGTGGAAAATGTGCACCTTGGAAACCGCATGACAGCCCCCTCGGCAGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000400918.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CAA 90 bp CTCACACCTGGGCCCGGGCAGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCAGAGTTCGAAGGCTTaGAGTATATCAACCCATTAT +
Preference number: 5 (lower is better)
Translates to: LTPGPGQASFVLEELAAVQSSKA*SISTHY
Trigger: ATAATGGGTTGATATACTCAAAGCCTTCGAACTCTG...CACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCCCGGGCCCAGGTGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS TCA 90 bp TCCCTCCAGAAGCTTTCTCTAAGGTTGCCAGAAGGTGCTAAGATCTaGACCGAGGTCATCTTGTCCCGGGGTTTCCAGGCAGCGTCCCTT +
Preference number: 5 (lower is better)
Translates to: SLQKLSLRLPEGAKI*TEVILSRGFQAASL
Trigger: AAGGGACGCTGCCTGGAAACCCCGGGACAAGATGACCTCGGTTCAGATCTTAGCACCTTCTGGCAACCTTAGAGAAAGCTTCTGGAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS-3UTR CAA 90 bp CTGACAGCAACAAGGATCTCAGAGCTTCAGCCAAGAGCATGGATTTCTCCCCAGTGTTGGCTGCCAACTTaGGACTCCGGTGCCTTCGCA +
Preference number: 5 (lower is better)
Translates to: LTATRISELQPRAWISPQCWLPT*DSGAFA
Trigger: TGCGAAGGCACCGGAGTCCAAAGTTGGCAGCCAACA...CTGGGGAGAAATCCATGCTCTTGGCTGAAGCTCTGAGATCCTTGTTGCTGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420515.1
CDS CCA 90 bp ATGACGTCATTGCCGCCTGGAATCTGCTGTTTGGAGGCGTCGCCATaGAGACCGGAAGGCTCAGGGTGGGTAAAAATAGCAAACCCAAAA +
Preference number: 5 (lower is better)
Translates to: MTSLPPGICCLEASP*RPEGSGWVKIANPK
Trigger: TTTTGGGTTTGCTATTTTTACCCACCCTGAGCCTTCCGGTCTCCATGGCGACGCCTCCAAACAGCAGATTCCAGGCGGCAATGACGTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487186.5
CDS-3UTR CAA 90 bp TTTCATCACAACACAGAGACAGACAGGAGCCCGCCCTGCTTTAATGCGCATGCGGTCCAGGAAAAGGTCTaGGGTCCGACAGTGAAGACT +
Preference number: 5 (lower is better)
Translates to: FHHNTETDRSPPCFNAHAVQEKV*GPTVKT
Trigger: AGTCTTCACTGTCGGACCCAAGACCTTTTCCTGGAC...CGCATGCGCATTAAAGCAGGGCGGGCTCCTGTCTGTCTCTGTGTTGTGATGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378543.2
ENST00000378546.9
CDS-3UTR CAA 90 bp ACCACAGGCACGCGCCACCACGCCCAGGCATGTAAAGATGGGATCTTGCCATGTTTGTTGTTGTTGTTGTaGGCTGCCAACTTTGGACTC +
Preference number: 5 (lower is better)
Translates to: TTGTRHHAQACKDGILPCLLLLL*AANFGL
Trigger: GAGTCCAAAGTTGGCAGCCAACAACAACAACAACAA...ACATGGCAAGATCCCATCTTTACATGCCTGGGCGTGGTGGCGCGTGCCTGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420515.1
ENST00000440825.6
CDS-3UTR CAA 90 bp TCCCCAGGGCTCCCAACAGTACCCTCTGTCCGTGATTCAGGGTCTTACTCTGTCAGTGTTCGAATGTGCTaGAAGCATTCCAGACACACC +
Preference number: 5 (lower is better)
Translates to: SPGLPTVPSVRDSGSYSVSVRMC*KHSRHT
Trigger: GGTGTGTCTGGAATGCTTCAAGCACATTCGAACACT...GACAGAGTAAGACCCTGAATCACGGACAGAGGGTACTGTTGGGAGCCCTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420515.1
CDS TCA 90 bp CCAGGGGCATCAGGCATGACTGAAGGACCTGGTCTCCATAAGCTCTaGAACCTGCCGCCCATTAACTCAACCAAAAGTTACGAACCAGCA +
Preference number: 5 (lower is better)
Translates to: PGASGMTEGPGLHKL*NLPPINSTKSYEPA
Trigger: TGCTGGTTCGTAACTTTTGGTTGAGTTAATGGGCGGCAGGTTTCAGAGCTTATGGAGACCAGGTCCTTCAGTCATGCCTGATGCCCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS GCA 90 bp AAGTTGAACCTGATGAAAACGCTCCACTTCTTCGGAGCCATCTGCTaGTGTGGTGACGGAGTTTTGCTGTGGCGCACAGGTTTCCACTTG +
Preference number: 5 (lower is better)
Translates to: KLNLMKTLHFFGAIC*CGDGVLLWRTGFHL
Trigger: CAAGTGGAAACCTGTGCGCCACAGCAAAACTCCGTCACCACAGCAGCAGATGGCTCCGAAGAAGTGGAGCGTTTTCATCAGGTTCAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469733.5
ENST00000514625.1
CDS CCA 90 bp ATCTGCTGTTTGGAGGCGTCGCCATGGAGACCGGAAGGCTCAGGGTaGGTAAAAATAGCAAACCCAAAAGGGTGTAAGTTCCAAGAACGC +
Preference number: 5 (lower is better)
Translates to: ICCLEASPWRPEGSG*VKIANPKGCKFQER
Trigger: GCGTTCTTGGAACTTACACCCTTTTGGGTTTGCTATTTTTACCCACCCTGAGCCTTCCGGTCTCCATGGCGACGCCTCCAAACAGCAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487186.5
CDS-3UTR CAA 90 bp AACAGAACTCGATGCACTGACCTGCTCCGCCAGGAAAGTGAGCGTGTAGCGTCCCTGACCCTTCTCCTATaGTTTTTCCAAGCTGGAGAA +
Preference number: 5 (lower is better)
Translates to: NRTRCTDLLRQESERVASLTLLL*FFQAGE
Trigger: TTCTCCAGCTTGGAAAAACAATAGGAGAAGGGTCAG...GGACGCTACACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCATCGAGTTCTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS GCA 90 bp TTAGGCGGAGCTCCACCCTCCCAACCACTGATTTTGGACACCAGCTaGCTGAACTGTGAGAATATACATGTCACTCGTTTTAGGCTCCCA +
Preference number: 5 (lower is better)
Translates to: LGGAPPSQPLILDTS*LNCENIHVTRFRLP
Trigger: TGGGAGCCTAAAACGAGTGACATGTATATTCTCACAGTTCAGGCAGCTGGTGTCCAAAATCAGTGGTTGGGAGGGTGGAGCTCCGCCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487186.5
CDS GCA 90 bp TCAAAGTTGAACCTGATGAAAACGCTCCACTTCTTCGGAGCCATCTaGTGCTGTGGTGACGGAGTTTTGCTGCTGGCAAGGACAGCCAAA +
Preference number: 5 (lower is better)
Translates to: SKLNLMKTLHFFGAI*CCGDGVLLLARTAK
Trigger: TTTGGCTGTCCTTGCCAGCAGCAAAACTCCGTCACCACAGCAGCAGATGGCTCCGAAGAAGTGGAGCGTTTTCATCAGGTTCAACTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487186.5
CDS-3UTR CAA 90 bp GGTGTGAGGCCGCGTGCGTCTCTGTCGTGGACACGCGTGATTGACCCTTTAACTCAGAGTTCGAAGGCTTaGAGTATATCAACCCATTAT +
Preference number: 5 (lower is better)
Translates to: GVRPRASLSWTRVIDPLTQSSKA*SISTHY
Trigger: ATAATGGGTTGATATACTCAAAGCCTTCGAACTCTG...AGTTAAAGGGTCAATCACGCGTGTCCACGACAGAGACGCACGCGGCCTCACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400919.7
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CAA 90 bp AATGGCTCCGGTCACGACGGTGTCTTTTGGAAGTGGTTCTCGAAAACTCTGGTGGTGCCGGTTACCAGTTaGGCCGTTCTTGTACACAAT +
Preference number: 5 (lower is better)
Translates to: NGSGHDGVFWKWFSKTLVVPVTS*AVLVHN
Trigger: ATTGTGTACAAGAACGGCCAAACTGGTAACCGGCAC...CACCAGAGTTTTCGAGAACCACTTCCAAAAGACACCGTCGTGACCGGAGCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CAA 90 bp AAGTGTTCGAATGTGCTTGAAGCATTCCAGACACACCAAGGCCTGGACCTGACTTGGCTGTGCAAACCCTaGTTCCCAAAGATATGGGGC +
Preference number: 5 (lower is better)
Translates to: KCSNVLEAFQTHQGLDLTWLCKP*FPKIWG
Trigger: GCCCCATATCTTTGGGAACAAGGGTTTGCACAGCCA...AGTCAGGTCCAGGCCTTGGTGTGTCTGGAATGCTTCAAGCACATTCGAACACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420515.1
CDS GCA 90 bp TTTCTTTTGTTGTTGTTGTTGTTGGCTGCCAACTTTGGACTCCGGTaGCTTCGCATTCCCGAGCTGTTTTTGCTTCTGGAAGACCAGGGG +
Preference number: 5 (lower is better)
Translates to: FLLLLLLLAANFGLR*LRIPELFLLLEDQG
Trigger: CCCCTGGTCTTCCAGAAGCAAAAACAGCTCGGGAATGCGAAGGCACCGGAGTCCAAAGTTGGCAGCCAACAACAACAACAACAAAAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS-3UTR CAA 90 bp TTCCAGCCACAGATCACAGACGACTACGGTCTGGACAACTTTGACACACAGTTCTCACGACGGTGTCTTTaGGAAGTGGTTCTCGAAAAC +
Preference number: 5 (lower is better)
Translates to: FQPQITDDYGLDNFDTQFSRRCL*EVVLEN
Trigger: GTTTTCGAGAACCACTTCCAAAAGACACCGTCGTGA...GAACTGTGTGTCAAAGTTGTCCAGACCGTAGTCGTCTGTGATCTGTGGCTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CAA 90 bp GTGTTGCCAGTAGCGTGCCGGTTACCAGTTTGGCCGTTCTTGTACACAATATGTCTGACCCTTCTCCTATaGTTTTTCCAAGCTGGAGAA +
Preference number: 5 (lower is better)
Translates to: VLPVACRLPVWPFLYTICLTLLL*FFQAGE
Trigger: TTCTCCAGCTTGGAAAAACAATAGGAGAAGGGTCAG...ACATATTGTGTACAAGAACGGCCAAACTGGTAACCGGCACGCTACTGGCAACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414253.5
ENST00000428120.5
CDS-3UTR CAA 90 bp CTGACAGCAACAAGGATCTCAGAGCTTCAGCCAAGAGCATGGATTTCTCCCCAGCTTTTGTTGTTGTTGTaGTTGGCTGCCAACTTTGGA +
Preference number: 5 (lower is better)
Translates to: LTATRISELQPRAWISPQLLLLL*LAANFG
Trigger: TCCAAAGTTGGCAGCCAACAACAACAACAACAAAAG...CTGGGGAGAAATCCATGCTCTTGGCTGAAGCTCTGAGATCCTTGTTGCTGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420515.1
CDS-3UTR CAA 90 bp TTCCAGCCACAGATCACAGACGACTACGGTCTGGACAACTTTGACACACAGTTCCTTTTGTTGTTGTTGTaGTTGGCTGCCAACTTTGGA +
Preference number: 5 (lower is better)
Translates to: FQPQITDDYGLDNFDTQFLLLLL*LAANFG
Trigger: TCCAAAGTTGGCAGCCAACAACAACAACAACAAAAG...GAACTGTGTGTCAAAGTTGTCCAGACCGTAGTCGTCTGTGATCTGTGGCTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428120.5
CDS GCA 72 bp GGGCAGGGACCTGGCGGGGGATTCCAGGTGCCCTCCTaGCCCGTGAAGCAGCCGGTAGGAACGGCCCGGGCC +
Preference number: 6 (lower is better)
Translates to: GQGPGGGFQVPS*PVKQPVGTARA
Trigger: GGCCCGGGCCGTTCCTACCGGCTGCTTCACGGGGCAGGAGGGCACCTGGAATCCCCCGCCAGGTCCCTGCCC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000378543.2
ENST00000378546.9
ENST00000400918.7
ENST00000400919.7
ENST00000401813.7
ENST00000414253.5
ENST00000420515.1
ENST00000428120.5
ENST00000440825.6
ENST00000469733.5
ENST00000476803.1
ENST00000487186.5
ENST00000497675.2
CDS GCA 72 bp CAGCTGCGCAGGGCCGCGGCACCCTCCACAGACGGCTaGTGCTCCACCCTGGGGGCCCTGCAGGGATCAGGT +
Preference number: 6 (lower is better)
Translates to: QLRRAAAPSTDG*CSTLGALQGSG
Trigger: ACCTGATCCCTGCAGGGCCCCCAGGGTGGAGCAGCAGCCGTCTGTGGAGGGTGCCGCGGCCCTGCGCAGCTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000378543.2
ENST00000378546.9
ENST00000400918.7
ENST00000400919.7
ENST00000401813.7
ENST00000414253.5
ENST00000420515.1
ENST00000428120.5
ENST00000440825.6
ENST00000469733.5
ENST00000476803.1
ENST00000487186.5
ENST00000497675.2
CDS GCA 72 bp GCCAACCTGCCACTCTGGGAGGCCCCACGCGGCCCCTaGACCTCTCAGGAGGGCGCTGGCGCTGGGATGGTG +
Preference number: 6 (lower is better)
Translates to: ANLPLWEAPRGP*TSQEGAGAGMV
Trigger: CACCATCCCAGCGCCAGCGCCCTCCTGAGAGGTGCAGGGGCCGCGTGGGGCCTCCCAGAGTGGCAGGTTGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS GCA 72 bp CACCACGGAGAAGGACGCCGTCACCGGCGTGCAGGCTaGCAACCTGCCACTCTGGGAGGCCCCACGCGGCCC +
Preference number: 6 (lower is better)
Translates to: HHGEGRRHRRAG*QPATLGGPTRP
Trigger: GGGCCGCGTGGGGCCTCCCAGAGTGGCAGGTTGGCAGCCTGCACGCCGGTGACGGCGTCCTTCTCCGTGGTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS GCA 72 bp GGGAGGGGCCACACTCACTCGGCCACCTCCGCGGCATaGTGGCCGCAGAGAGCACCGTCTGGACCTCCGGGC +
Preference number: 6 (lower is better)
Translates to: GRGHTHSATSAA*WPQRAPSGPPG
Trigger: GCCCGGAGGTCCAGACGGTGCTCTCTGCGGCCAGCATGCCGCGGAGGTGGCCGAGTGAGTGTGGCCCCTCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS CCA 72 bp AGGCGGCCTGACCCGGAGAAAAGGCAGGACGGCGGGTaGCCTGCCAGGGAGAGCCGCCGCGGCTGCGTCTAC +
Preference number: 6 (lower is better)
Translates to: RRPDPEKRQDGG*PARESRRGCVY
Trigger: GTAGACGCAGCCGCGGCGGCTCTCCCTGGCAGGCCACCCGCCGTCCTGCCTTTTCTCCGGGTCAGGCCGCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS GCA 72 bp GCCTGGGGGCGAACTCCTTCTGGCACATGGGGCAGCTaGGCAGGGCCGCGGCACCCTCCACAGACGGCTGCT +
Preference number: 6 (lower is better)
Translates to: AWGRTPSGTWGS*AGPRHPPQTAA
Trigger: AGCAGCCGTCTGTGGAGGGTGCCGCGGCCCTGCGCAGCTGCCCCATGTGCCAGAAGGAGTTCGCCCCCAGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000378543.2
ENST00000378546.9
ENST00000401813.7
ENST00000414253.5
ENST00000476803.1
ENST00000487186.5
CDS CCA 72 bp GCTGGGTCAGCCTGGGGGCGAACTCCTTCTGGCACATaGGGCAGCTGCGCAGGGCCGCGGCACCCTCCACAG +
Preference number: 6 (lower is better)
Translates to: AGSAWGRTPSGT*GSCAGPRHPPQ
Trigger: CTGTGGAGGGTGCCGCGGCCCTGCGCAGCTGCCCCATGTGCCAGAAGGAGTTCGCCCCCAGGCTGACCCAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000378543.2
ENST00000378546.9
ENST00000401813.7
ENST00000414253.5
ENST00000476803.1
ENST00000487186.5
CDS CCA 72 bp AGGGGCCACACTCACTCGGCCACCTCCGCGGCATGCTaGCCGCAGAGAGCACCGTCTGGACCTCCGGGCCCT +
Preference number: 6 (lower is better)
Translates to: RGHTHSATSAAC*PQRAPSGPPGP
Trigger: AGGGCCCGGAGGTCCAGACGGTGCTCTCTGCGGCCAGCATGCCGCGGAGGTGGCCGAGTGAGTGTGGCCCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS GCA 72 bp ACCTGGGGGCGAACTCCTTCTGGCACATGGGGCAGCTaGGCAGGGCCGCGGCACCCTCCACAGACGGCTGCT +
Preference number: 6 (lower is better)
Translates to: TWGRTPSGTWGS*AGPRHPPQTAA
Trigger: AGCAGCCGTCTGTGGAGGGTGCCGCGGCCCTGCGCAGCTGCCCCATGTGCCAGAAGGAGTTCGCCCCCAGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000400918.7
ENST00000400919.7
ENST00000469733.5
ENST00000497675.2
CDS CCA 72 bp GGGCGGGAGTTGAAGTACCTGGGGGCGAACTCCTTCTaGCACATGGGGCAGCTGCGCAGGGCCGCGGCACCC +
Preference number: 6 (lower is better)
Translates to: GRELKYLGANSF*HMGQLRRAAAP
Trigger: GGGTGCCGCGGCCCTGCGCAGCTGCCCCATGTGCCAGAAGGAGTTCGCCCCCAGGTACTTCAACTCCCGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400918.7
ENST00000400919.7
ENST00000469733.5
CDS CCA 72 bp GGCCTACTCACCTGGGGGCGAACTCCTTCTGGCACATaGGGCAGCTGCGCAGGGCCGCGGCACCCTCCACAG +
Preference number: 6 (lower is better)
Translates to: GLLTWGRTPSGT*GSCAGPRHPPQ
Trigger: CTGTGGAGGGTGCCGCGGCCCTGCGCAGCTGCCCCATGTGCCAGAAGGAGTTCGCCCCCAGGTGAGTAGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS TCA 72 bp ACGGTAACCGCCAGTGGTGTTTCCACACCGTGCCCGTaGGGAGGCCACGCCAGGCCCCTGCGTCCGAGCTGG +
Preference number: 6 (lower is better)
Translates to: TVTASGVSTPCP*GGHARPLRPSW
Trigger: CCAGCTCGGACGCAGGGGCCTGGCGTGGCCTCCTCACGGGCACGGTGTGGAAACACCACTGGCGGTTACCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS GCA 72 bp CCGGGCAGCCTTCTGACGCAGCCAGGAACTGGGCTGTaGTCCACCACACCTGCTGGCCCGTGGATGCCAGGC +
Preference number: 6 (lower is better)
Translates to: PGSLLTQPGTGL*STTPAGPWMPG
Trigger: GCCTGGCATCCACGGGCCAGCAGGTGTGGTGGAGCACAGCCCAGTTCCTGGCTGCGTCAGAAGGCTGCCCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000401813.7
ENST00000487186.5
CDS GCA 72 bp TTCTGGGGGCGAACTCCTTCTGGCACATGGGGCAGCTaGGCAGGGCCGCGGCACCCTCCACAGACGGCTGCT +
Preference number: 6 (lower is better)
Translates to: FWGRTPSGTWGS*AGPRHPPQTAA
Trigger: AGCAGCCGTCTGTGGAGGGTGCCGCGGCCCTGCGCAGCTGCCCCATGTGCCAGAAGGAGTTCGCCCCCAGAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420515.1
ENST00000428120.5
ENST00000440825.6
CDS GCA 72 bp CAAGCCTCACCACGGAGAAGGACGCCGTCACCGGCGTaGAGGCTGCCAACCTGCCACTCTGGGAGGCCCCAC +
Preference number: 6 (lower is better)
Translates to: QASPRRRTPSPA*RLPTCHSGRPH
Trigger: GTGGGGCCTCCCAGAGTGGCAGGTTGGCAGCCTGCACGCCGGTGACGGCGTCCTTCTCCGTGGTGAGGCTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS CCA 72 bp GTGGGCCAGGAAACCTCTGCAGGTGGAGAGGGTGGCTaGGACCCCCTCGGGAGTCCCCAGGGAAGGTCTGGC +
Preference number: 6 (lower is better)
Translates to: VGQETSAGGEGG*DPLGSPQGRSG
Trigger: GCCAGACCTTCCCTGGGGACTCCCGAGGGGGTCCCAGCCACCCTCTCCACCTGCAGAGGTTTCCTGGCCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487186.5
CDS CCA 72 bp ATCCGAGTCCTGCAGGTCAGCGCCCTGGGCATCCAGTaGGGCCGGGAGGGGTGTCTGAGCGCAGCCACCTTC +
Preference number: 6 (lower is better)
Translates to: IRVLQVSALGIQ*GREGCLSAATF
Trigger: GAAGGTGGCTGCGCTCAGACACCCCTCCCGGCCCCACTGGATGCCCAGGGCGCTGACCTGCAGGACTCGGAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS CCA 72 bp GCGCTGGCGCTGGGATGGTGGCCGGCCAGGCAGGGGTaGCAGGAGAAAACCCATCCGAGTCCTGCAGGTCAG +
Preference number: 6 (lower is better)
Translates to: ALALGWWPARQG*QEKTHPSPAGQ
Trigger: CTGACCTGCAGGACTCGGATGGGTTTTCTCCTGCCACCCCTGCCTGGCCGGCCACCATCCCAGCGCCAGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS GCA 72 bp GCACCTCGTGATCCAGGATCAGCTCCGGGCTCACCGTaGGCAGTAGCTCGGCCCAGAGCCGCTCCCGCTCAT +
Preference number: 6 (lower is better)
Translates to: APRDPGSAPGSP*AVARPRAAPAH
Trigger: ATGAGCGGGAGCGGCTCTGGGCCGAGCTACTGCGCACGGTGAGCCCGGAGCTGATCCTGGATCACGAGGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000378546.9
ENST00000400918.7
ENST00000401813.7
ENST00000414253.5
ENST00000420515.1
ENST00000428120.5
ENST00000476803.1
ENST00000487186.5
ENST00000497675.2
CDS GCA 72 bp CCCCCACTCCCGGGGCTGGCTCCAGCAGCCATCAGCTaGCTTCTCACTCTGGCAGAGCCCACCCAGTGCCTT +
Preference number: 6 (lower is better)
Translates to: PPLPGLAPAAIS*LLTLAEPTQCL
Trigger: AAGGCACTGGGTGGGCTCTGCCAGAGTGAGAAGGCAGCTGATGGCTGCTGGAGCCAGCCCCGGGAGTGGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS GCA 72 bp CCGCAGAGAGCACCGTCTGGACCTCCGGGCCCTCTCTaGTCCTGCCGCTGGAGAGGATCCGGCTGGTCAGAA +
Preference number: 6 (lower is better)
Translates to: PQRAPSGPPGPL*SCRWRGSGWSE
Trigger: TTCTGACCAGCCGGATCCTCTCCAGCGGCAGGAGCAGAGAGGGCCCGGAGGTCCAGACGGTGCTCTCTGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS CCA 72 bp GGGCTCATGCACCCGGCAGACCACGGTAACCGCCAGTaGTGTTTCCACACCGTGCCCGTGAGGAGGCCACGC +
Preference number: 6 (lower is better)
Translates to: GLMHPADHGNRQ*CFHTVPVRRPR
Trigger: GCGTGGCCTCCTCACGGGCACGGTGTGGAAACACCACTGGCGGTTACCGTGGTCTGCCGGGTGCATGAGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS CCA 72 bp CCGTCTGGACCTCCGGGCCCTCTCTGCTCCTGCCGCTaGAGAGGATCCGGCTGGTCAGAAACAAGGGACGGG +
Preference number: 6 (lower is better)
Translates to: PSGPPGPLCSCR*RGSGWSETRDG
Trigger: CCCGTCCCTTGTTTCTGACCAGCCGGATCCTCTCCAGCGGCAGGAGCAGAGAGGGCCCGGAGGTCCAGACGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS CAA 90 bp CCCGGGCCCCACAGGTCCGGCGGAAAGGGTGTCCAGGAAAAGGTCTaGGGTCCGACAGTGAAGACTTCAGTGGGCTCCGGGCCGCACCTG +
Preference number: 6 (lower is better)
Translates to: PGPHRSGGKGVQEKV*GPTVKTSVGSGPHL
Trigger: CAGGTGCGGCCCGGAGCCCACTGAAGTCTTCACTGTCGGACCCAAGACCTTTTCCTGGACACCCTTTCCGCCGGACCTGTGGGGCCCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000378543.2
ENST00000378546.9
ENST00000400918.7
ENST00000400919.7
ENST00000401813.7
ENST00000414253.5
ENST00000420515.1
ENST00000428120.5
ENST00000440825.6
ENST00000469733.5
ENST00000476803.1
ENST00000487186.5
ENST00000497675.2
CDS TCA 72 bp GTGGCCCTGGAAGCCAGGACAGTTGACTTCCGGCCATaGCTCCCGGAGAGTGCCGGAGCTGGCGTGCTCAGC +
Preference number: 6 (lower is better)
Translates to: VALEARTVDFRP*LPESAGAGVLS
Trigger: GCTGAGCACGCCAGCTCCGGCACTCTCCGGGAGTCATGGCCGGAAGTCAACTGTCCTGGCTTCCAGGGCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS GCA 72 bp GCTCGGGCCCACACATGGGGTGCAAGAGTAGGGGTGTaGCTTGGTGCCCTTGGGCACCGACAGCCTCCTCAC +
Preference number: 6 (lower is better)
Translates to: ARAHTWGARVGV*LGALGHRQPPH
Trigger: GTGAGGAGGCTGTCGGTGCCCAAGGGCACCAAGGCACACCCCTACTCTTGCACCCCATGTGTGGGCCCGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000401813.7
ENST00000487186.5
CDS GCA 72 bp GGGCAGCAGAGCAGGTGCTCGGGCCCACACATGGGGTaGAAGAGTAGGGGTGTGCCTTGGTGCCCTTGGGCA +
Preference number: 6 (lower is better)
Translates to: GQQSRCSGPHMG*KSRGVPWCPWA
Trigger: TGCCCAAGGGCACCAAGGCACACCCCTACTCTTGCACCCCATGTGTGGGCCCGAGCACCTGCTCTGCTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000401813.7
ENST00000487186.5
CDS GCA 72 bp TCAATCCGCTGGGCTGCTGTGGGGTTCCCGCAGAGCTaGTCCAAGGGGCCGAGAGAAGGAAGGACGCTGCCC +
Preference number: 6 (lower is better)
Translates to: SIRWAAVGFPQS*SKGPREGRTLP
Trigger: GGGCAGCGTCCTTCCTTCTCTCGGCCCCTTGGAGCAGCTCTGCGGGAACCCCACAGCAGCCCAGCGGATTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420964.1
CDS GCA 72 bp ATCCCCCAAGGTCCTCCAAGTGGGCCAGGAAACCTCTaGAGGTGGAGAGGGTGGCTGGGACCCCCTCGGGAG +
Preference number: 6 (lower is better)
Translates to: IPQGPPSGPGNL*RWRGWLGPPRE
Trigger: CTCCCGAGGGGGTCCCAGCCACCCTCTCCACCTGCAGAGGTTTCCTGGCCCACTTGGAGGACCTTGGGGGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000487186.5
CDS GCA 72 bp GGAGCCTGGCCTCAGGCCTCAGGGCACCACACTACTTaGCTCCAGGGACCAGCCTGTTCACCCCACACCCAG +
Preference number: 6 (lower is better)
Translates to: GAWPQASGHHTT*LQGPACSPHTQ
Trigger: CTGGGTGTGGGGTGAACAGGCTGGTCCCTGGAGGCAAGTAGTGTGGTGCCCTGAGGCCTGAGGCCAGGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514625.1
CDS CCA 72 bp GCACCCACACACGGTGCCCTGGCAGTGCTCACCTGCTaGCAAGGACAGCCAAAAGGCCCGGGCAGCCTTCTG +
Preference number: 6 (lower is better)
Translates to: APTHGALAVLTC*QGQPKGPGSLL
Trigger: CAGAAGGCTGCCCGGGCCTTTTGGCTGTCCTTGCCAGCAGGTGAGCACTGCCAGGGCACCGTGTGTGGGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401813.7
CDS CCA 72 bp CGGGAAGGTGTTCCTGTGCTCTGGGCCTGGGGACGCTaGTGCCACCAGATTCCAGGATGGCCAGGTGGACCC +
Preference number: 6 (lower is better)
Translates to: REGVPVLWAWGR*CHQIPGWPGGP
Trigger: GGGTCCACCTGGCCATCCTGGAATCTGGTGGCACCAGCGTCCCCAGGCCCAGAGCACAGGAACACCTTCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS CCA 72 bp GGAGGCCACGCCAGGCCCCTGCGTCCGAGCTGGGGGTaGGGAAGCTGTGTCTCAACAAGCCTCTCTATGGGA +
Preference number: 6 (lower is better)
Translates to: GGHARPLRPSWG*GSCVSTSLSMG
Trigger: TCCCATAGAGAGGCTTGTTGAGACACAGCTTCCCCACCCCCAGCTCGGACGCAGGGGCCTGGCGTGGCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS CCA 72 bp TGCGTCTGGGGCCTGAGCGGAGGGAAGATATCAGGCTaGGGCCGGCTGCTGGGCCTGTCCTCTCTGAGTTGC +
Preference number: 6 (lower is better)
Translates to: CVWGLSGGKISG*GRLLGLSSLSC
Trigger: GCAACTCAGAGAGGACAGGCCCAGCAGCCGGCCCCAGCCTGATATCTTCCCTCCGCTCAGGCCCCAGACGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514625.1
CDS TCA 72 bp TCCTGTCCTGGGAAGGCGGGCAGTGAAGGCACCTCGTaGTCCAGGATCAGCTCCGGGCTCACCGTGCGCAGT +
Preference number: 6 (lower is better)
Translates to: SCPGKAGSEGTS*SRISSGLTVRS
Trigger: ACTGCGCACGGTGAGCCCGGAGCTGATCCTGGATCACGAGGTGCCTTCACTGCCCGCCTTCCCAGGACAGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000378546.9
ENST00000400918.7
ENST00000401813.7
ENST00000414253.5
ENST00000420515.1
ENST00000428120.5
ENST00000476803.1
ENST00000487186.5
ENST00000497675.2
CDS TCA 72 bp GCTGGCAAGGACAGCCAAAAGGCCCGGGCAGCCTTCTaGCGCAGCCAGGAACTGGGCTGTGCTCCACCACAC +
Preference number: 6 (lower is better)
Translates to: AGKDSQKARAAF*RSQELGCAPPH
Trigger: GTGTGGTGGAGCACAGCCCAGTTCCTGGCTGCGTCAGAAGGCTGCCCGGGCCTTTTGGCTGTCCTTGCCAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000401813.7
ENST00000487186.5
CDS TCA 72 bp GCAGCCCGGTGGCCGTGCACCCTCCCAATTTCCAAATaGGACCTGTGGCCGACAGGCACCCTGGGCACATGC +
Preference number: 6 (lower is better)
Translates to: AARWPCTLPISK*DLWPTGTLGTC
Trigger: GCATGTGCCCAGGGTGCCTGTCGGCCACAGGTCTCATTTGGAAATTGGGAGGGTGCACGGCCACCGGGCTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401813.7
CDS TCA 72 bp AGCGCTGACACCCTGCAAATCAGGCTAAGACAGCGGTaGCGGGCCCTGAGGCTGGCAGGCCTAAGCAGCCCG +
Preference number: 6 (lower is better)
Translates to: SADTLQIRLRQR*RALRLAGLSSP
Trigger: CGGGCTGCTTAGGCCTGCCAGCCTCAGGGCCCGTCACCGCTGTCTTAGCCTGATTTGCAGGGTGTCAGCGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401813.7
CDS TCA 72 bp GGGTTTCCAGGCAGCGTCCCTTGTTTGGGGGCCCTCTaGGATGCCTTCAGACCCCCGCCTGTGGCGGAAGAG +
Preference number: 6 (lower is better)
Translates to: GFPGSVPCLGAL*DAFRPPPVAEE
Trigger: CTCTTCCGCCACAGGCGGGGGTCTGAAGGCATCTCAGAGGGCCCCCAAACAAGGGACGCTGCCTGGAAACCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS TCA 72 bp TCCCTCACACGCCACTGCTGGGGGACACACCCCCACTaGGCGGCCAAGTCCACAGGACACGTGTCCCTGTGT +
Preference number: 6 (lower is better)
Translates to: SLTRHCWGTHPH*AAKSTGHVSLC
Trigger: ACACAGGGACACGTGTCCTGTGGACTTGGCCGCTCAGTGGGGGTGTGTCCCCCAGCAGTGGCGTGTGAGGGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS TCA 72 bp TGCTCAGCAGAGCTGCCGGGGACGATGTCCCGGGGCTaGGTGGGCGGCTTCAGCCTAGACTTGGGCCTAGAT +
Preference number: 6 (lower is better)
Translates to: CSAELPGTMSRG*VGGFSLDLGLD
Trigger: ATCTAGGCCCAAGTCTAGGCTGAAGCCGCCCACTCAGCCCCGGGACATCGTCCCCGGCAGCTCTGCTGAGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS TCA 72 bp TCAGAAGGACTCCAGGATGCAGCTGCGTCTGGGGCCTaGGCGGAGGGAAGATATCAGGCTGGGGCCGGCTGC +
Preference number: 6 (lower is better)
Translates to: SEGLQDAAASGA*AEGRYQAGAGC
Trigger: GCAGCCGGCCCCAGCCTGATATCTTCCCTCCGCTCAGGCCCCAGACGCAGCTGCATCCTGGAGTCCTTCTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514625.1
CDS GCA 72 bp AGAGCACCGTCTGGACCTCCGGGCCCTCTCTGCTCCTaGCGCTGGAGAGGATCCGGCTGGTCAGAAACAAGG +
Preference number: 6 (lower is better)
Translates to: RAPSGPPGPLCS*RWRGSGWSETR
Trigger: CCTTGTTTCTGACCAGCCGGATCCTCTCCAGCGGCAGGAGCAGAGAGGGCCCGGAGGTCCAGACGGTGCTCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS CCA 72 bp TCTACCCAGGAGGGCGGTCCTGTGTGCTCTGTTCCCTaGGAAGCCTCTCAGAGTGCGCGGCACCAAGGAGCC +
Preference number: 6 (lower is better)
Translates to: STQEGGPVCSVP*EASQSARHQGA
Trigger: GGCTCCTTGGTGCCGCGCACTCTGAGAGGCTTCCCAGGGAACAGAGCACACAGGACCGCCCTCCTGGGTAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000401813.7
ENST00000487186.5
CDS CCA 72 bp GGCCCACACATGGGGTGCAAGAGTAGGGGTGTGCCTTaGTGCCCTTGGGCACCGACAGCCTCCTCACAGCCT +
Preference number: 6 (lower is better)
Translates to: GPHMGCKSRGVP*CPWAPTASSQP
Trigger: AGGCTGTGAGGAGGCTGTCGGTGCCCAAGGGCACCAAGGCACACCCCTACTCTTGCACCCCATGTGTGGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000401813.7
ENST00000487186.5
CDS CCA 72 bp CACTGGGCTGCCTCCACCCCTTCCCATGTGGCTAAATaGCCCAGCACCCACACACGGTGCCCTGGCAGTGCT +
Preference number: 6 (lower is better)
Translates to: HWAASTPSHVAK*PSTHTRCPGSA
Trigger: AGCACTGCCAGGGCACCGTGTGTGGGTGCTGGGCCATTTAGCCACATGGGAAGGGGTGGAGGCAGCCCAGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401813.7
CDS CCA 72 bp TGTTTTTGCTTCTGGGGGCGAACTCCTTCTGGCACATaGGGCAGCTGCGCAGGGCCGCGGCACCCTCCACAG +
Preference number: 6 (lower is better)
Translates to: CFCFWGRTPSGT*GSCAGPRHPPQ
Trigger: CTGTGGAGGGTGCCGCGGCCCTGCGCAGCTGCCCCATGTGCCAGAAGGAGTTCGCCCCCAGAAGCAAAAACA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420515.1
ENST00000428120.5
ENST00000440825.6
CDS CCA 72 bp AGGGGGCCCTTGGAGGATCCCCCAAGGTCCTCCAAGTaGGCCAGGAAACCTCTGCAGGTGGAGAGGGTGGCT +
Preference number: 6 (lower is better)
Translates to: RGPLEDPPRSSK*ARKPLQVERVA
Trigger: AGCCACCCTCTCCACCTGCAGAGGTTTCCTGGCCCACTTGGAGGACCTTGGGGGATCCTCCAAGGGCCCCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000487186.5
CDS CCA 72 bp TTCTGGCGCCTGCTCAGCTTGAGAACGCGCTCATCGTaGAGCCCGGCAGACAGGCGGCCTGACCCGGAGAAA +
Preference number: 6 (lower is better)
Translates to: FWRLLSLRTRSS*SPADRRPDPEK
Trigger: TTTCTCCGGGTCAGGCCGCCTGTCTGCCGGGCTCCACGATGAGCGCGTTCTCAAGCTGAGCAGGCGCCAGAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS CCA 72 bp GCCAAGCACTGGGCCAGGTGGCTGTCAACATCCAGCTaGGTCAGCCTGCAAGGGAGGGGCCACACTCACTCG +
Preference number: 6 (lower is better)
Translates to: AKHWARWLSTSS*VSLQGRGHTHS
Trigger: CGAGTGAGTGTGGCCCCTCCCTTGCAGGCTGACCCAGCTGGATGTTGACAGCCACCTGGCCCAGTGCTTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS CAA 72 bp TGGAGCCTGGCCTCAGGCCTCAGGGCACCACACTACTaGCCTCCAGGGACCAGCCTGTTCACCCCACACCCA +
Preference number: 6 (lower is better)
Translates to: WSLASGLRAPHY*PPGTSLFTPHP
Trigger: TGGGTGTGGGGTGAACAGGCTGGTCCCTGGAGGCAAGTAGTGTGGTGCCCTGAGGCCTGAGGCCAGGCTCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514625.1
CDS CAA 90 bp CGTGTAGCCTCCTCCCAGGATCCGGAGCAGGAGGGTGGCTGTCTTTaGCGTTCAATCCGCTGGGCTGCTGTGGGGTTCCCGCAGAGCTGC +
Preference number: 6 (lower is better)
Translates to: RVASSQDPEQEGGCL*RSIRWAAVGFPQSC
Trigger: GCAGCTCTGCGGGAACCCCACAGCAGCCCAGCGGATTGAACGCAAAAGACAGCCACCCTCCTGCTCCGGATCCTGGGAGGAGGCTACACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420964.1
CDS TCA 72 bp ATGTGGCCCCATCAGCCCAACTGGAGCGGCTGGAAATaGCCATCACCAGGCCTGGCCAAGGTGTGGCCCTGG +
Preference number: 6 (lower is better)
Translates to: MWPHQPNWSGWK*PSPGLAKVWPW
Trigger: CCAGGGCCACACCTTGGCCAGGCCTGGTGATGGTCATTTCCAGCCGCTCCAGTTGGGCTGATGGGGCCACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS GCA 72 bp CCACACATGGGGTGCAAGAGTAGGGGTGTGCCTTGGTaGCCTTGGGCACCGACAGCCTCCTCACAGCCTCAG +
Preference number: 6 (lower is better)
Translates to: PHMGCKSRGVPW*PWAPTASSQPQ
Trigger: CTGAGGCTGTGAGGAGGCTGTCGGTGCCCAAGGGCACCAAGGCACACCCCTACTCTTGCACCCCATGTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000401813.7
ENST00000487186.5
CDS GCA 72 bp TCCCATGTGGCTAAATGGCCCAGCACCCACACACGGTaGCCTGGCAGTGCTCACCTGCTGGCAAGGACAGCC +
Preference number: 6 (lower is better)
Translates to: SHVAKWPSTHTR*PGSAHLLARTA
Trigger: GGCTGTCCTTGCCAGCAGGTGAGCACTGCCAGGGCACCGTGTGTGGGTGCTGGGCCATTTAGCCACATGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401813.7
CDS GCA 72 bp ACCAAGTTCAGCTTGAAAACGCTGAGCCCAGCTGGGTaGGGGGAGCCCTCGGTCTCCTGTCCACCACACCCG +
Preference number: 6 (lower is better)
Translates to: TKFSLKTLSPAG*GEPSVSCPPHP
Trigger: CGGGTGTGGTGGACAGGAGACCGAGGGCTCCCCGCACCCAGCTGGGCTCAGCGTTTTCAAGCTGAACTTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487186.5
CDS GCA 72 bp TCCAGGCAGCGTCCCTTGTTTGGGGGCCCTCTGAGATaGCTTCAGACCCCCGCCTGTGGCGGAAGAGCTTTG +
Preference number: 6 (lower is better)
Translates to: SRQRPLFGGPLR*LQTPACGGRAL
Trigger: CAAAGCTCTTCCGCCACAGGCGGGGGTCTGAAGGCATCTCAGAGGGCCCCCAAACAAGGGACGCTGCCTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS CCA 72 bp ACGTCTTCTGTGCTTTCGGCCAAGCACTGGGCCAGGTaGCTGTCAACATCCAGCTGGGTCAGCCTGGGGGCG +
Preference number: 6 (lower is better)
Translates to: TSSVLSAKHWAR*LSTSSWVSLGA
Trigger: CGCCCCCAGGCTGACCCAGCTGGATGTTGACAGCCACCTGGCCCAGTGCTTGGCCGAAAGCACAGAAGACGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000378543.2
ENST00000378546.9
ENST00000401813.7
ENST00000414253.5
ENST00000476803.1
ENST00000487186.5
CDS CCA 72 bp CCCATGACGCACTCTCGGGAAGGTGTTCCTGTGCTCTaGGCCTGGGGACGCTGGTGCCACCAGATTCCAGGA +
Preference number: 6 (lower is better)
Translates to: PMTHSREGVPVL*AWGRWCHQIPG
Trigger: TCCTGGAATCTGGTGGCACCAGCGTCCCCAGGCCCAGAGCACAGGAACACCTTCCCGAGAGTGCGTCATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS CAA 90 bp TCTGCCCTCAGACCAGTCCACGGCGCGCCGTTTTACCCTTGGGCTTaGCTGTGTCCCTTCCTTTGGCTCCTGTGCCCCGTCTGTGTGGCC +
Preference number: 6 (lower is better)
Translates to: SALRPVHGAPFYPWA*LCPFLWLLCPVCVA
Trigger: GGCCACACAGACGGGGCACAGGAGCCAAAGGAAGGGACACAGCAAAGCCCAAGGGTAAAACGGCGCGCCGTGGACTGGTCTGAGGGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS CAA 90 bp CCACGGCGCGCCGTTTTACCCTTGGGCTTTGCTGTGTCCCTTCCTTaGGCTCCTGTGCCCCGTCTGTGTGGCCACTGCAACCCTCAAGTC +
Preference number: 6 (lower is better)
Translates to: PRRAVLPLGFAVSLP*APVPRLCGHCNPQV
Trigger: GACTTGAGGGTTGCAGTGGCCACACAGACGGGGCACAGGAGCCAAAGGAAGGGACACAGCAAAGCCCAAGGGTAAAACGGCGCGCCGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS TCA 72 bp AGCACAGGTGTTCTCGCTCTGGGGTTGGCCTGGCGCTaGCCTGTGCACCTGACAGGGAAGGTAGGCAGCTCT +
Preference number: 6 (lower is better)
Translates to: STGVLALGLAWR*PVHLTGKVGSS
Trigger: AGAGCTGCCTACCTTCCCTGTCAGGTGCACAGGTCAGCGCCAGGCCAACCCCAGAGCGAGAACACCTGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469733.5
ENST00000514625.1
CDS TCA 72 bp CAAGCCTCTCTATGGGATTCTGGCGCCTGCTCAGCTTaGGAACGCGCTCATCGTGGAGCCCGGCAGACAGGC +
Preference number: 6 (lower is better)
Translates to: QASLWDSGACSA*ERAHRGARQTG
Trigger: GCCTGTCTGCCGGGCTCCACGATGAGCGCGTTCTCAAGCTGAGCAGGCGCCAGAATCCCATAGAGAGGCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS GCA 72 bp GACCAGTCCACGGCGCGCCGTTTTACCCTTGGGCTTTaGTGTGTCCCTTCCTTTGGCTCCTGTGCCCCGTCT +
Preference number: 6 (lower is better)
Translates to: DQSTARRFTLGL*CVPSFGSCAPS
Trigger: AGACGGGGCACAGGAGCCAAAGGAAGGGACACAGCAAAGCCCAAGGGTAAAACGGCGCGCCGTGGACTGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS CCA 72 bp GAGCAGGAGGGTGGCTGTCTTTTGCGTTCAATCCGCTaGGCTGCTGTGGGGTTCCCGCAGAGCTGCTCCAAG +
Preference number: 6 (lower is better)
Translates to: EQEGGCLLRSIR*AAVGFPQSCSK
Trigger: CTTGGAGCAGCTCTGCGGGAACCCCACAGCAGCCCAGCGGATTGAACGCAAAAGACAGCCACCCTCCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420964.1
CDS CCA 72 bp GCGTGTAGCCTCCTCCCAGGATCCGGAGCAGGAGGGTaGCTGTCTTTTGCGTTCAATCCGCTGGGCTGCTGT +
Preference number: 6 (lower is better)
Translates to: ACSLLPGSGAGG*LSFAFNPLGCC
Trigger: ACAGCAGCCCAGCGGATTGAACGCAAAAGACAGCCACCCTCCTGCTCCGGATCCTGGGAGGAGGCTACACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420964.1
CDS CCA 72 bp ACGCACCAAGTTCAGCTTGAAAACGCTGAGCCCAGCTaGGTGCGGGGAGCCCTCGGTCTCCTGTCCACCACA +
Preference number: 6 (lower is better)
Translates to: THQVQLENAEPS*VRGALGLLSTT
Trigger: TGTGGTGGACAGGAGACCGAGGGCTCCCCGCACCCAGCTGGGCTCAGCGTTTTCAAGCTGAACTTGGTGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487186.5
CDS CCA 72 bp TGTGTCCCTTCCTTTGGCTCCTGTGCCCCGTCTGTGTaGCCACTGCAACCCTCAAGTCCCCCTCTCCAGACC +
Preference number: 6 (lower is better)
Translates to: CVPSFGSCAPSV*PLQPSSPPLQT
Trigger: GGTCTGGAGAGGGGGACTTGAGGGTTGCAGTGGCCACACAGACGGGGCACAGGAGCCAAAGGAAGGGACACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS CCA 72 bp GCCCTCAGACCAGTCCACGGCGCGCCGTTTTACCCTTaGGCTTTGCTGTGTCCCTTCCTTTGGCTCCTGTGC +
Preference number: 6 (lower is better)
Translates to: ALRPVHGAPFYP*ALLCPFLWLLC
Trigger: GCACAGGAGCCAAAGGAAGGGACACAGCAAAGCCCAAGGGTAAAACGGCGCGCCGTGGACTGGTCTGAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS CCA 72 bp CCTCAAATCCCCTGTTCCTTGAGCGGTCCTGGAGCCTaGCCTCAGGCCTCAGGGCACCACACTACTTGCCTC +
Preference number: 6 (lower is better)
Translates to: PQIPCSLSGPGA*PQASGHHTTCL
Trigger: GAGGCAAGTAGTGTGGTGCCCTGAGGCCTGAGGCCAGGCTCCAGGACCGCTCAAGGAACAGGGGATTTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514625.1
CDS CAA 72 bp AGGTCATCTTGTCCCGGGGTTTCCAGGCAGCGTCCCTaGTTTGGGGGCCCTCTGAGATGCCTTCAGACCCCC +
Preference number: 6 (lower is better)
Translates to: RSSCPGVSRQRP*FGGPLRCLQTP
Trigger: GGGGGTCTGAAGGCATCTCAGAGGGCCCCCAAACAAGGGACGCTGCCTGGAAACCCCGGGACAAGATGACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS CAA 90 bp GATCTCTCCAAGGCCTGGGCGGCAGGAAAGGGAGAGATGACGTCATaGCCGCCTGGAATCTGCTGTTTGGAGGCGTCGCCATGGAGACCG +
Preference number: 6 (lower is better)
Translates to: DLSKAWAAGKGEMTS*PPGICCLEASPWRP
Trigger: CGGTCTCCATGGCGACGCCTCCAAACAGCAGATTCCAGGCGGCAATGACGTCATCTCTCCCTTTCCTGCCGCCCAGGCCTTGGAGAGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487186.5
CDS TCA 72 bp GAAAGGGTGTCCAGGAAAAGGTCTTGGGTCCGACAGTaGAGACTTCAGTGGGCTCCGGGCCGCACCTGGGCT +
Preference number: 6 (lower is better)
Translates to: ERVSRKRSWVRQ*RLQWAPGRTWA
Trigger: AGCCCAGGTGCGGCCCGGAGCCCACTGAAGTCTTCACTGTCGGACCCAAGACCTTTTCCTGGACACCCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000378543.2
ENST00000378546.9
ENST00000400918.7
ENST00000400919.7
ENST00000401813.7
ENST00000414253.5
ENST00000420515.1
ENST00000428120.5
ENST00000440825.6
ENST00000469733.5
ENST00000476803.1
ENST00000487186.5
ENST00000497675.2
CDS TCA 72 bp ATCTGCTGGCTGGGGACAGCCCTTGATGTCCTGAGATaGGATGCTGCCTGGTCCCTGCACCTTCCAGGACCC +
Preference number: 6 (lower is better)
Translates to: ICWLGTALDVLR*DAAWSLHLPGP
Trigger: GGGTCCTGGAAGGTGCAGGGACCAGGCAGCATCTCATCTCAGGACATCAAGGGCTGTCCCCAGCCAGCAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487186.5
CDS TCA 72 bp CCAGTGCCTTCTGAAGCCCCCGAGGGTCACTCAGTCTaGGACTTTCCGGCTTCTGCCCATCCTGGGAACCAG +
Preference number: 6 (lower is better)
Translates to: PVPSEAPEGHSV*DFPASAHPGNQ
Trigger: CTGGTTCCCAGGATGGGCAGAAGCCGGAAAGTCTCAGACTGAGTGACCCTCGGGGGCTTCAGAAGGCACTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS TCA 72 bp GCCTTCTCACTCTGGCAGAGCCCACCCAGTGCCTTCTaGAGCCCCCGAGGGTCACTCAGTCTGAGACTTTCC +
Preference number: 6 (lower is better)
Translates to: AFSLWQSPPSAF*SPRGSLSLRLS
Trigger: GGAAAGTCTCAGACTGAGTGACCCTCGGGGGCTTCAGAAGGCACTGGGTGGGCTCTGCCAGAGTGAGAAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS TCA 72 bp CTTGCTGGAGGCCAAGTGGTCAGTGTCCCATCAGAGTaGCCATCCCTCACACGCCACTGCTGGGGGACACAC +
Preference number: 6 (lower is better)
Translates to: LAGGQVVSVPSE*PSLTRHCWGTH
Trigger: GTGTGTCCCCCAGCAGTGGCGTGTGAGGGATGGTCACTCTGATGGGACACTGACCACTTGGCCTCCAGCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS GCA 72 bp CCTTGGGCTTTGCTGTGTCCCTTCCTTTGGCTCCTGTaGCCCGTCTGTGTGGCCACTGCAACCCTCAAGTCC +
Preference number: 6 (lower is better)
Translates to: PWALLCPFLWLL*PVCVATATLKS
Trigger: GGACTTGAGGGTTGCAGTGGCCACACAGACGGGGCACAGGAGCCAAAGGAAGGGACACAGCAAAGCCCAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS GCA 72 bp GGGGCAGGTCCCACATTTCTCAGAAGGACTCCAGGATaGAGCTGCGTCTGGGGCCTGAGCGGAGGGAAGATA +
Preference number: 6 (lower is better)
Translates to: GAGPTFLRRTPG*SCVWGLSGGKI
Trigger: TATCTTCCCTCCGCTCAGGCCCCAGACGCAGCTGCATCCTGGAGTCCTTCTGAGAAATGTGGGACCTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514625.1
CDS CCA 72 bp TGCCAGGCAGGCACGCCCACCCATAGCCAGATGTGGTaGCATTTATGGGATACGGGAGTGCCAGGCAGACAG +
Preference number: 6 (lower is better)
Translates to: CQAGTPTHSQMW*HLWDTGVPGRQ
Trigger: CTGTCTGCCTGGCACTCCCGTATCCCATAAATGCCACCACATCTGGCTATGGGTGGGCGTGCCTGCCTGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000401813.7
ENST00000487186.5
CDS CCA 72 bp ACGGTGAAACCCTGTCTCTATGGAAACTCCCTGTCTTaGGGCCGCGCACACCATGCCTGGCAGGAGCTGGAG +
Preference number: 6 (lower is better)
Translates to: TVKPCLYGNSLS*GRAHHAWQELE
Trigger: CTCCAGCTCCTGCCAGGCATGGTGTGCGCGGCCCCAAGACAGGGAGTTTCCATAGAGACAGGGTTTCACCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469733.5
CDS CCA 72 bp GGCGGCAGGAAAGGGAGAGATGACGTCATTGCCGCCTaGAATCTGCTGTTTGGAGGCGTCGCCATGGAGACC +
Preference number: 6 (lower is better)
Translates to: GGRKGRDDVIAA*NLLFGGVAMET
Trigger: GGTCTCCATGGCGACGCCTCCAAACAGCAGATTCCAGGCGGCAATGACGTCATCTCTCCCTTTCCTGCCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487186.5
CDS CAA 72 bp CACAGGTCCGGCGGAAAGGGTGTCCAGGAAAAGGTCTaGGGTCCGACAGTGAAGACTTCAGTGGGCTCCGGG +
Preference number: 6 (lower is better)
Translates to: HRSGGKGVQEKV*GPTVKTSVGSG
Trigger: CCCGGAGCCCACTGAAGTCTTCACTGTCGGACCCAAGACCTTTTCCTGGACACCCTTTCCGCCGGACCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000378543.2
ENST00000378546.9
ENST00000400918.7
ENST00000400919.7
ENST00000401813.7
ENST00000414253.5
ENST00000420515.1
ENST00000428120.5
ENST00000440825.6
ENST00000469733.5
ENST00000476803.1
ENST00000487186.5
ENST00000497675.2
CDS CAA 72 bp CACGGTGAAACCCTGTCTCTATGGAAACTCCCTGTCTaGGGGCCGCGCACACCATGCCTGGCAGGAGCTGGA +
Preference number: 6 (lower is better)
Translates to: HGETLSLWKLPV*GPRTPCLAGAG
Trigger: TCCAGCTCCTGCCAGGCATGGTGTGCGCGGCCCCAAGACAGGGAGTTTCCATAGAGACAGGGTTTCACCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469733.5
CDS CAA 72 bp GGAGAGATGACGTCATTGCCGCCTGGAATCTGCTGTTaGGAGGCGTCGCCATGGAGACCGGAAGGCTCAGGG +
Preference number: 6 (lower is better)
Translates to: GEMTSLPPGICC*EASPWRPEGSG
Trigger: CCCTGAGCCTTCCGGTCTCCATGGCGACGCCTCCAAACAGCAGATTCCAGGCGGCAATGACGTCATCTCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487186.5
CDS CAA 90 bp AGACAGGCTGTGAGAGACAGTTGCCTGGGAAACATCGCCAGATCTTaGGGGCAGCAGAGCAGGTGCTCGGGCCCACACATGGGGTGCAAG +
Preference number: 6 (lower is better)
Translates to: RQAVRDSCLGNIARS*GQQSRCSGPHMGCK
Trigger: CTTGCACCCCATGTGTGGGCCCGAGCACCTGCTCTGCTGCCCCAAAGATCTGGCGATGTTTCCCAGGCAACTGTCTCTCACAGCCTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000401813.7
ENST00000487186.5
CDS GCA 72 bp GGAAAGGGAGAGATGACGTCATTGCCGCCTGGAATCTaGTGTTTGGAGGCGTCGCCATGGAGACCGGAAGGC +
Preference number: 6 (lower is better)
Translates to: GKGEMTSLPPGI*CLEASPWRPEG
Trigger: GCCTTCCGGTCTCCATGGCGACGCCTCCAAACAGCAGATTCCAGGCGGCAATGACGTCATCTCTCCCTTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487186.5
CDS CCA 72 bp GGCACGCCCACCCATAGCCAGATGTGGTGGCATTTATaGGATACGGGAGTGCCAGGCAGACAGGCTGTGAGA +
Preference number: 6 (lower is better)
Translates to: GTPTHSQMWWHL*DTGVPGRQAVR
Trigger: TCTCACAGCCTGTCTGCCTGGCACTCCCGTATCCCATAAATGCCACCACATCTGGCTATGGGTGGGCGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000401813.7
ENST00000487186.5
CDS CCA 72 bp GGGCCTCGCCACATCAACAGAGACAAAACGCAGCTCTaGCTCTCAACATCCTCACCCCTCACCAGGTGCCCA +
Preference number: 6 (lower is better)
Translates to: GPRHINRDKTQL*LSTSSPLTRCP
Trigger: TGGGCACCTGGTGAGGGGTGAGGATGTTGAGAGCCAGAGCTGCGTTTTGTCTCTGTTGATGTGGCGAGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS CCA 72 bp GGCTGGGCAGTGGATGTGCAGCTCACGTCAGAGAATTaGTGTTTCTGGCGAGGAGGGACCAAGCCTCACCAC +
Preference number: 6 (lower is better)
Translates to: GWAVDVQLTSEN*CFWRGGTKPHH
Trigger: GTGGTGAGGCTTGGTCCCTCCTCGCCAGAAACACCAATTCTCTGACGTGAGCTGCACATCCACTGCCCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS TCA 72 bp CCAGTCCGATTGATGGGCTCATGGATTGGAAAGCTGTaGCAGACGCCCTGGGCGTGGGGTGGGTGTGATTCT +
Preference number: 6 (lower is better)
Translates to: PVRLMGSWIGKL*QTPWAWGGCDS
Trigger: AGAATCACACCCACCCCACGCCCAGGGCGTCTGTCACAGCTTTCCAATCCATGAGCCCATCAATCGGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469733.5
CDS GCA 72 bp AGTGGGCGGCTTCAGCCTAGACTTGGGCCTAGATCTTaGTGGAGGCCAAGTGGTCAGTGTCCCATCAGAGTG +
Preference number: 6 (lower is better)
Translates to: SGRLQPRLGPRS*WRPSGQCPIRV
Trigger: CACTCTGATGGGACACTGACCACTTGGCCTCCAGCAAGATCTAGGCCCAAGTCTAGGCTGAAGCCGCCCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS CAA 72 bp TGGCTGGGCAGTGGATGTGCAGCTCACGTCAGAGAATaGGTGTTTCTGGCGAGGAGGGACCAAGCCTCACCA +
Preference number: 6 (lower is better)
Translates to: WLGSGCAAHVRE*VFLARRDQASP
Trigger: TGGTGAGGCTTGGTCCCTCCTCGCCAGAAACACCAATTCTCTGACGTGAGCTGCACATCCACTGCCCAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS CAA 90 bp GCATCCCCTGTGCAGCCGGCTGTGAACTGTGGGCTCCAACCCTGCTaGGTTTGCTTCAACTTTCTGAGTGACGTGCAGACCTTCACAGAG +
Preference number: 6 (lower is better)
Translates to: ASPVQPAVNCGLQPC*VCFNFLSDVQTFTE
Trigger: CTCTGTGAAGGTCTGCACGTCACTCAGAAAGTTGAAGCAAACCAAGCAGGGTTGGAGCCCACAGTTCACAGCCGGCTGCACAGGGGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000469733.5
ENST00000487186.5
ENST00000514625.1
CDS TCA 72 bp GCTCCAACCCTGCTTGGTTTGCTTCAACTTTCTGAGTaGCGTGCAGACCTTCACAGAGGAGCCGTGGGGTGG +
Preference number: 6 (lower is better)
Translates to: APTLLGLLQLSE*RADLHRGAVGW
Trigger: CCACCCCACGGCTCCTCTGTGAAGGTCTGCACGTCACTCAGAAAGTTGAAGCAAACCAAGCAGGGTTGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000469733.5
ENST00000487186.5
ENST00000514625.1
CDS TCA 72 bp GTGGGCTCCAACCCTGCTTGGTTTGCTTCAACTTTCTaGGTGACGTGCAGACCTTCACAGAGGAGCCGTGGG +
Preference number: 6 (lower is better)
Translates to: VGSNPAWFASTF*VTCRPSQRSRG
Trigger: CCCACGGCTCCTCTGTGAAGGTCTGCACGTCACTCAGAAAGTTGAAGCAAACCAAGCAGGGTTGGAGCCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000469733.5
ENST00000487186.5
ENST00000514625.1
CDS TCA 72 bp AAACTGTGCTTGGTGCATCCCCTGTGCAGCCGGCTGTaGACTGTGGGCTCCAACCCTGCTTGGTTTGCTTCA +
Preference number: 6 (lower is better)
Translates to: KLCLVHPLCSRL*TVGSNPAWFAS
Trigger: TGAAGCAAACCAAGCAGGGTTGGAGCCCACAGTTCACAGCCGGCTGCACAGGGGATGCACCAAGCACAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000469733.5
ENST00000487186.5
ENST00000514625.1
CDS GCA 72 bp CCTGTGCAGCCGGCTGTGAACTGTGGGCTCCAACCCTaGTTGGTTTGCTTCAACTTTCTGAGTGACGTGCAG +
Preference number: 6 (lower is better)
Translates to: PVQPAVNCGLQP*LVCFNFLSDVQ
Trigger: CTGCACGTCACTCAGAAAGTTGAAGCAAACCAAGCAGGGTTGGAGCCCACAGTTCACAGCCGGCTGCACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000469733.5
ENST00000487186.5
ENST00000514625.1
CDS CCA 72 bp CTGCCCTGCTGGGAAATTGTGAGCTCAGATGCTGATTaGTCTACCCAGGAGGGCGGTCCTGTGTGCTCTGTT +
Preference number: 6 (lower is better)
Translates to: LPCWEIVSSDAD*STQEGGPVCSV
Trigger: AACAGAGCACACAGGACCGCCCTCCTGGGTAGACCAATCAGCATCTGAGCTCACAATTTCCCAGCAGGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000401813.7
ENST00000487186.5
CDS CCA 72 bp GCTTGGTGCATCCCCTGTGCAGCCGGCTGTGAACTGTaGGCTCCAACCCTGCTTGGTTTGCTTCAACTTTCT +
Preference number: 6 (lower is better)
Translates to: AWCIPCAAGCEL*APTLLGLLQLS
Trigger: AGAAAGTTGAAGCAAACCAAGCAGGGTTGGAGCCCACAGTTCACAGCCGGCTGCACAGGGGATGCACCAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000469733.5
ENST00000487186.5
ENST00000514625.1
CDS CCA 72 bp GCGCACAGGTTTCCACTTGTCATAGGAAACTGTGCTTaGTGCATCCCCTGTGCAGCCGGCTGTGAACTGTGG +
Preference number: 6 (lower is better)
Translates to: AHRFPLVIGNCA*CIPCAAGCELW
Trigger: CCACAGTTCACAGCCGGCTGCACAGGGGATGCACCAAGCACAGTTTCCTATGACAAGTGGAAACCTGTGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000469733.5
ENST00000487186.5
ENST00000514625.1
CDS CCA 72 bp TTGCCGCCTGGAATCTGCTGTTTGGAGGCGTCGCCATaGAGACCGGAAGGCTCAGGGTGGGTAAAAATAGCA +
Preference number: 6 (lower is better)
Translates to: LPPGICCLEASP*RPEGSGWVKIA
Trigger: TGCTATTTTTACCCACCCTGAGCCTTCCGGTCTCCATGGCGACGCCTCCAAACAGCAGATTCCAGGCGGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487186.5
CDS CCA 72 bp GTGGATGTGCAGCTCACGTCAGAGAATTGGTGTTTCTaGCGAGGAGGGACCAAGCCTCACCACGGAGAAGGA +
Preference number: 6 (lower is better)
Translates to: VDVQLTSENWCF*RGGTKPHHGEG
Trigger: TCCTTCTCCGTGGTGAGGCTTGGTCCCTCCTCGCCAGAAACACCAATTCTCTGACGTGAGCTGCACATCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS CAA 72 bp GTGCAGCCGGCTGTGAACTGTGGGCTCCAACCCTGCTaGGTTTGCTTCAACTTTCTGAGTGACGTGCAGACC +
Preference number: 6 (lower is better)
Translates to: VQPAVNCGLQPC*VCFNFLSDVQT
Trigger: GGTCTGCACGTCACTCAGAAAGTTGAAGCAAACCAAGCAGGGTTGGAGCCCACAGTTCACAGCCGGCTGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000469733.5
ENST00000487186.5
ENST00000514625.1
CDS TCA 72 bp CTCAGAGTCACCCAAATGTTCATCTCTGCCCAGCGCTaGCACCCTGCAAATCAGGCTAAGACAGCGGTGACG +
Preference number: 6 (lower is better)
Translates to: LRVTQMFISAQR*HPANQAKTAVT
Trigger: CGTCACCGCTGTCTTAGCCTGATTTGCAGGGTGTCAGCGCTGGGCAGAGATGAACATTTGGGTGACTCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401813.7
CDS TCA 72 bp AACGCTCCACTTCTTCGGAGCCATCTGCTGCTGTGGTaGCGGAGTTTTGCTGTGGCGCACAGGTTTCCACTT +
Preference number: 6 (lower is better)
Translates to: NAPLLRSHLLLW*RSFAVAHRFPL
Trigger: AAGTGGAAACCTGTGCGCCACAGCAAAACTCCGTCACCACAGCAGCAGATGGCTCCGAAGAAGTGGAGCGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469733.5
ENST00000514625.1
CDS TCA 72 bp AAAGCCAGCGCTGAGCTCGGCCACCTCTTGACCTTCTaGACGGCTGTGGTTTCCAAACACGGATGGATAACC +
Preference number: 6 (lower is better)
Translates to: KASAELGHLLTF*TAVVSKHGWIT
Trigger: GGTTATCCATCCGTGTTTGGAAACCACAGCCGTTCAGAAGGTCAAGAGGTGGCCGAGCTCAGCGCTGGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS GCA 72 bp CACAGGTTTCCACTTGTCATAGGAAACTGTGCTTGGTaGATCCCCTGTGCAGCCGGCTGTGAACTGTGGGCT +
Preference number: 6 (lower is better)
Translates to: HRFPLVIGNCAW*IPCAAGCELWA
Trigger: AGCCCACAGTTCACAGCCGGCTGCACAGGGGATGCACCAAGCACAGTTTCCTATGACAAGTGGAAACCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000469733.5
ENST00000487186.5
ENST00000514625.1
CDS GCA 72 bp CTGATGAAAACGCTCCACTTCTTCGGAGCCATCTGCTaGTGTGGTGACGGAGTTTTGCTGTGGCGCACAGGT +
Preference number: 6 (lower is better)
Translates to: LMKTLHFFGAIC*CGDGVLLWRTG
Trigger: ACCTGTGCGCCACAGCAAAACTCCGTCACCACAGCAGCAGATGGCTCCGAAGAAGTGGAGCGTTTTCATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469733.5
ENST00000514625.1
CDS CCA 72 bp CTCCTTCCACCGCGGAAGAACAAGTGTCCCAGCCACTaGCATCCTCAGAGTCACCCAAATGTTCATCTCTGC +
Preference number: 6 (lower is better)
Translates to: LLPPRKNKCPSH*HPQSHPNVHLC
Trigger: GCAGAGATGAACATTTGGGTGACTCTGAGGATGCCAGTGGCTGGGACACTTGTTCTTCCGCGGTGGAAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401813.7
CDS TCA 72 bp AAGTCACAGAAACCAAGCTGGAGGAGCACTGTGGGTTaGGCAGCGTCTCCGAAGACTCATGTCCACCAGTAC +
Preference number: 6 (lower is better)
Translates to: KSQKPSWRSTVG*AASPKTHVHQY
Trigger: GTACTGGTGGACATGAGTCTTCGGAGACGCTGCTCAACCCACAGTGCTCCTCCAGCTTGGTTTCTGTGACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000401813.7
ENST00000487186.5
CDS TCA 72 bp GGCGTCCTGTCCCAGTTTATCTGTGTCCAGTCCGATTaGTGGGCTCATGGATTGGAAAGCTGTGACAGACGC +
Preference number: 6 (lower is better)
Translates to: GVLSQFICVQSD*WAHGLESCDRR
Trigger: GCGTCTGTCACAGCTTTCCAATCCATGAGCCCATCAATCGGACTGGACACAGATAAACTGGGACAGGACGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469733.5
CDS TCA 72 bp GTTTTTATGGGAAATCTGCTGGCTGGGGACAGCCCTTaGTGTCCTGAGATGAGATGCTGCCTGGTCCCTGCA +
Preference number: 6 (lower is better)
Translates to: VFMGNLLAGDSP*CPEMRCCLVPA
Trigger: TGCAGGGACCAGGCAGCATCTCATCTCAGGACATCAAGGGCTGTCCCCAGCCAGCAGATTTCCCATAAAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487186.5
CDS GCA 72 bp AACCTGATGAAAACGCTCCACTTCTTCGGAGCCATCTaGTGCTGTGGTGACGGAGTTTTGCTGTGGCGCACA +
Preference number: 6 (lower is better)
Translates to: NLMKTLHFFGAI*CCGDGVLLWRT
Trigger: TGTGCGCCACAGCAAAACTCCGTCACCACAGCAGCAGATGGCTCCGAAGAAGTGGAGCGTTTTCATCAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469733.5
ENST00000514625.1
CDS GCA 72 bp CTGATGAAAACGCTCCACTTCTTCGGAGCCATCTGCTaGTGTGGTGACGGAGTTTTGCTGCTGGCAAGGACA +
Preference number: 6 (lower is better)
Translates to: LMKTLHFFGAIC*CGDGVLLLART
Trigger: TGTCCTTGCCAGCAGCAAAACTCCGTCACCACAGCAGCAGATGGCTCCGAAGAAGTGGAGCGTTTTCATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487186.5
CDS GCA 72 bp AACCTGATGAAAACGCTCCACTTCTTCGGAGCCATCTaGTGCTGTGGTGACGGAGTTTTGCTGCTGGCAAGG +
Preference number: 6 (lower is better)
Translates to: NLMKTLHFFGAI*CCGDGVLLLAR
Trigger: CCTTGCCAGCAGCAAAACTCCGTCACCACAGCAGCAGATGGCTCCGAAGAAGTGGAGCGTTTTCATCAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487186.5
CDS GCA 72 bp GGAGGCAGAAGAGTAAACATGGCTGGGCAGTGGATGTaGAGCTCACGTCAGAGAATTGGTGTTTCTGGCGAG +
Preference number: 6 (lower is better)
Translates to: GGRRVNMAGQWM*SSRQRIGVSGE
Trigger: CTCGCCAGAAACACCAATTCTCTGACGTGAGCTGCACATCCACTGCCCAGCCATGTTTACTCTTCTGCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS CCA 72 bp GAGGTCGCCAGACACAAGGCCAGGCACTGGGCAGTTTaGGTTATCTTGTTAGCAAAACTGGGTTCCATTCCC +
Preference number: 6 (lower is better)
Translates to: EVARHKARHWAV*VILLAKLGSIP
Trigger: GGGAATGGAACCCAGTTTTGCTAACAAGATAACCCAAACTGCCCAGTGCCTGGCCTTGTGTCTGGCGACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS CAA 72 bp CAAGTCACAGAAACCAAGCTGGAGGAGCACTGTGGGTaGAGCAGCGTCTCCGAAGACTCATGTCCACCAGTA +
Preference number: 6 (lower is better)
Translates to: QVTETKLEEHCG*SSVSEDSCPPV
Trigger: TACTGGTGGACATGAGTCTTCGGAGACGCTGCTCAACCCACAGTGCTCCTCCAGCTTGGTTTCTGTGACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000401813.7
ENST00000487186.5
CDS TCA 72 bp ATTTATGGGATACGGGAGTGCCAGGCAGACAGGCTGTaGGAGACAGTTGCCTGGGAAACATCGCCAGATCTT +
Preference number: 6 (lower is better)
Translates to: IYGIRECQADRL*ETVAWETSPDL
Trigger: AAGATCTGGCGATGTTTCCCAGGCAACTGTCTCTCACAGCCTGTCTGCCTGGCACTCCCGTATCCCATAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000401813.7
ENST00000487186.5
CDS GCA 72 bp TTGTTGTTGTTGTTGGCTGCCAACTTTGGACTCCGGTaGCTTCGCATTCCCGAGCTGTTTTTGCTTCTGGGG +
Preference number: 6 (lower is better)
Translates to: LLLLLAANFGLR*LRIPELFLLLG
Trigger: CCCCAGAAGCAAAAACAGCTCGGGAATGCGAAGGCACCGGAGTCCAAAGTTGGCAGCCAACAACAACAACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420515.1
ENST00000428120.5
ENST00000440825.6
CDS GCA 72 bp TGCCCGGCCTTTTCTTTTGTTGTTGTTGTTGTTGGCTaGCAACTTTGGACTCCGGTGCCTTCGCATTCCCGA +
Preference number: 6 (lower is better)
Translates to: CPAFSFVVVVVG*QLWTPVPSHSR
Trigger: TCGGGAATGCGAAGGCACCGGAGTCCAAAGTTGGCAGCCAACAACAACAACAACAAAAGAAAAGGCCGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000420515.1
ENST00000428120.5
ENST00000440825.6
ENST00000497675.2
CDS CCA 72 bp ACCGTGCCCGGCCTTTTCTTTTGTTGTTGTTGTTGTTaGCTGCCAACTTTGGACTCCGGTGCCTTCGCATTC +
Preference number: 6 (lower is better)
Translates to: TVPGLFFCCCCC*LPTLDSGAFAF
Trigger: GAATGCGAAGGCACCGGAGTCCAAAGTTGGCAGCCAACAACAACAACAACAAAAGAAAAGGCCGGGCACGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000420515.1
ENST00000428120.5
ENST00000440825.6
ENST00000497675.2
CDS TCA 72 bp AAGCTTTCTCTAAGGTTGCCAGAAGGTGCTAAGATCTaGACCGAGGTCATCTTGTCCCGGGGTTTCCAGGCA +
Preference number: 6 (lower is better)
Translates to: KLSLRLPEGAKI*TEVILSRGFQA
Trigger: TGCCTGGAAACCCCGGGACAAGATGACCTCGGTTCAGATCTTAGCACCTTCTGGCAACCTTAGAGAAAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS GCA 72 bp TTGTTGTTGTTGTTGGCTGCCAACTTTGGACTCCGGTaGCTTCGCATTCCCGAGCTGTTTTTGCTTCTGGAA +
Preference number: 6 (lower is better)
Translates to: LLLLLAANFGLR*LRIPELFLLLE
Trigger: TTCCAGAAGCAAAAACAGCTCGGGAATGCGAAGGCACCGGAGTCCAAAGTTGGCAGCCAACAACAACAACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS TCA 72 bp TCAGGCATGACTGAAGGACCTGGTCTCCATAAGCTCTaGAACCTGCCGCCCATTAACTCAACCAAAAGTTAC +
Preference number: 6 (lower is better)
Translates to: SGMTEGPGLHKL*NLPPINSTKSY
Trigger: GTAACTTTTGGTTGAGTTAATGGGCGGCAGGTTTCAGAGCTTATGGAGACCAGGTCCTTCAGTCATGCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS GCA 72 bp GCTCCACCCTCCCAACCACTGATTTTGGACACCAGCTaGCTGAACTGTGAGAATATACATGTCACTCGTTTT +
Preference number: 6 (lower is better)
Translates to: APPSQPLILDTS*LNCENIHVTRF
Trigger: AAAACGAGTGACATGTATATTCTCACAGTTCAGGCAGCTGGTGTCCAAAATCAGTGGTTGGGAGGGTGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487186.5
CDS GCA 72 bp AACCTGATGAAAACGCTCCACTTCTTCGGAGCCATCTaGTGCTGTGGTGACGGAGTTTTGCTTTATTGGAAA +
Preference number: 6 (lower is better)
Translates to: NLMKTLHFFGAI*CCGDGVLLYWK
Trigger: TTTCCAATAAAGCAAAACTCCGTCACCACAGCAGCAGATGGCTCCGAAGAAGTGGAGCGTTTTCATCAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401813.7
CDS CAA 72 bp CTTTTCTTTTGTTGTTGTTGTTGTTGGCTGCCAACTTaGGACTCCGGTGCCTTCGCATTCCCGAGCTGTTTT +
Preference number: 6 (lower is better)
Translates to: LFFCCCCCWLPT*DSGAFAFPSCF
Trigger: AAAACAGCTCGGGAATGCGAAGGCACCGGAGTCCAAAGTTGGCAGCCAACAACAACAACAACAAAAGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000420515.1
ENST00000428120.5
ENST00000440825.6
ENST00000497675.2
CDS CAA 72 bp AGACACAAGGCCAGGCACTGGGCAGTTTGGGTTATCTaGTTAGCAAAACTGGGTTCCATTCCCCTTTACTTA +
Preference number: 6 (lower is better)
Translates to: RHKARHWAVWVI*LAKLGSIPLYL
Trigger: TAAGTAAAGGGGAATGGAACCCAGTTTTGCTAACAAGATAACCCAAACTGCCCAGTGCCTGGCCTTGTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497675.2
CDS TCA 72 bp AACGCTCCACTTCTTCGGAGCCATCTGCTGCTGTGGTaGCGGAGTTTTGCTTTATTGGAAAATAATTTCTGG +
Preference number: 6 (lower is better)
Translates to: NAPLLRSHLLLW*RSFALLENNFW
Trigger: CCAGAAATTATTTTCCAATAAAGCAAAACTCCGTCACCACAGCAGCAGATGGCTCCGAAGAAGTGGAGCGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401813.7
CDS CCA 72 bp GCCAAAATTCATGTTTACAAAAGAACGTTTCAGCTGTaGGAGTTTGCATCCCAGGCAGAGCAGAAGGTGATC +
Preference number: 6 (lower is better)
Translates to: AKIHVYKRTFQL*EFASQAEQKVI
Trigger: GATCACCTTCTGCTCTGCCTGGGATGCAAACTCCCACAGCTGAAACGTTCTTTTGTAAACATGAATTTTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401813.7
CDS CCA 72 bp TTTTCTTTTGTTGTTGTTGTTGTTGGCTGCCAACTTTaGACTCCGGTGCCTTCGCATTCCCGAGCTGTTTTT +
Preference number: 6 (lower is better)
Translates to: FSFVVVVVGCQL*TPVPSHSRAVF
Trigger: AAAAACAGCTCGGGAATGCGAAGGCACCGGAGTCCAAAGTTGGCAGCCAACAACAACAACAACAAAAGAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000420515.1
ENST00000428120.5
ENST00000440825.6
ENST00000497675.2