RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAAP100 (Homo sapiens)

Ensembl gene IDs: ENSG00000185504

Ensembl transcript IDs: ENST00000327787.13, ENST00000425898.2, ENST00000443656.6, ENST00000536161.1, ENST00000541246.1, ENST00000544302.1, ENST00000545865.1

Found 692 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTACACGCGGCCACCCCCGCCACAGGCAGCGCAGAGCACAGGGCCTaGGAGGCAGTACTCCCGCAGCTCGGGCACCAGCTTCCCGGACTC +
Preference number: 1 (lower is better)
Translates to: VHAATPATGSAEHRA*EAVLPQLGHQLPGL
Trigger: GAGTCCGGGAAGCTGGTGCCCGAGCTGCGGGAGTACTGCCTCCCAGGCCCTGTGCTCTGCGCTGCCTGTGGCGGGGGTGGCCGCGTGTAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR TCA 90 bp CCTGGCCTCAGGGGCTGCTGCGGTGGTGGGAAGGCTGCCCAGCAGTaGGGAAGGCGAGTGCAGGGGCTGCGGCCGCGGTCAGAGAAGGAG +
Preference number: 1 (lower is better)
Translates to: PGLRGCCGGGKAAQQ*GRRVQGLRPRSEKE
Trigger: CTCCTTCTCTGACCGCGGCCGCAGCCCCTGCACTCGCCTTCCTCACTGCTGGGCAGCCTTCCCACCACCGCAGCAGCCCCTGAGGCCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR TCA 90 bp CCCGCCGAGCACCGGGGCCGAGCTGGTCCACGGGGATGGTGTAGGTaGTGGCGGAGCAGGCCGAGTCCAGGTCGAGAGCACAGGAGCTGG +
Preference number: 1 (lower is better)
Translates to: PAEHRGRAGPRGWCR*WRSRPSPGREHRSW
Trigger: CCAGCTCCTGTGCTCTCGACCTGGACTCGGCCTGCTCCGCCATCACCTACACCATCCCCGTGGACCAGCTCGGCCCCGGTGCTCGGCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR CCA 90 bp AGCCCAGGGGCAGGCCCGCCTGGTCACAGCAGGATGAGGCTGGGGTaGCGCAGCTGCCGGTACACCTGTAGCAGCCTCTGGGCGGTGGCA +
Preference number: 1 (lower is better)
Translates to: SPGAGPPGHSRMRLG*RSCRYTCSSLWAVA
Trigger: TGCCACCGCCCAGAGGCTGCTACAGGTGTACCGGCAGCTGCGCCACCCCAGCCTCATCCTGCTGTGACCAGGCGGGCCTGCCCCTGGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR TCA 90 bp TGGCATCAGCTCCAAAGAGGAGCCCGAAGAGGGCGTCCTCCAGCGTaGAGCCCCCGGAGCCCCCGAGGAGGTCGTGCGGGACCCTGGAGC +
Preference number: 1 (lower is better)
Translates to: WHQLQRGARRGRPPA*SPRSPRGGRAGPWS
Trigger: GCTCCAGGGTCCCGCACGACCTCCTCGGGGGCTCCGGGGGCTTCACGCTGGAGGACGCCCTCTTCGGGCTCCTCTTTGGAGCTGATGCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR GCA 90 bp GCAGGCCCGCCTGGTCACAGCAGGATGAGGCTGGGGTGGCGCAGCTaGCGGTACACCTGTAGCAGCCTCTGGGCGGTGGCACAGGAGCTG +
Preference number: 1 (lower is better)
Translates to: AGPPGHSRMRLGWRS*RYTCSSLWAVAQEL
Trigger: CAGCTCCTGTGCCACCGCCCAGAGGCTGCTACAGGTGTACCGGCAGCTGCGCCACCCCAGCCTCATCCTGCTGTGACCAGGCGGGCCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR CCA 90 bp TGGGGTGGCGCAGCTGCCGGTACACCTGTAGCAGCCTCTGGGCGGTaGCACAGGAGCTGGCCTCATCCTCCGTGCAGAGCCGGTCGCGCA +
Preference number: 1 (lower is better)
Translates to: WGGAAAGTPVAASGR*HRSWPHPPCRAGRA
Trigger: TGCGCGACCGGCTCTGCACGGAGGATGAGGCCAGCTCCTGTGCCACCGCCCAGAGGCTGCTACAGGTGTACCGGCAGCTGCGCCACCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR GCA 90 bp GTAGCAGCCTCTGGGCGGTGGCACAGGAGCTGGCCTCATCCTCCGTaGAGAGCCGGTCGCGCAGGGTCTGCACCTCCCGCAGCAGTGTCT +
Preference number: 1 (lower is better)
Translates to: VAASGRWHRSWPHPP*RAGRAGSAPPAAVS
Trigger: AGACACTGCTGCGGGAGGTGCAGACCCTGCGCGACCGGCTCTGCACGGAGGATGAGGCCAGCTCCTGTGCCACCGCCCAGAGGCTGCTAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR CCA 90 bp GGCAGCTCTGAGCAGCTCCGCCGACACCTTGATGGAAGCCACAGATaGGGGCAGGTACTCGGCCCGCAGGGAGGCGGGTCCTGCTGGCTG +
Preference number: 1 (lower is better)
Translates to: GSSEQLRRHLDGSHR*GQVLGPQGGGSCWL
Trigger: CAGCCAGCAGGACCCGCCTCCCTGCGGGCCGAGTACCTGCCCCCATCTGTGGCTTCCATCAAGGTGTCGGCGGAGCTGCTCAGAGCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR CCA 90 bp ATGAGGCTGGGGTGGCGCAGCTGCCGGTACACCTGTAGCAGCCTCTaGGCGGTGGCACAGGAGCTGGCCTCATCCTCCGTGCAGAGCCGG +
Preference number: 1 (lower is better)
Translates to: MRLGWRSCRYTCSSL*AVAQELASSSVQSR
Trigger: CCGGCTCTGCACGGAGGATGAGGCCAGCTCCTGTGCCACCGCCCAGAGGCTGCTACAGGTGTACCGGCAGCTGCGCCACCCCAGCCTCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR TCA 90 bp CCCGCAGCTCGGGCACCAGCTTCCCGGACTCATCCCAGCTGGCCTTaGTGGCCAGCATCCGGCCGTGGTGACCAAAGGCCACCAGGCAGT +
Preference number: 1 (lower is better)
Translates to: PAARAPASRTHPSWP*WPASGRGDQRPPGS
Trigger: ACTGCCTGGTGGCCTTTGGTCACCACGGCCGGATGCTGGCCATCAAGGCCAGCTGGGATGAGTCCGGGAAGCTGGTGCCCGAGCTGCGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR GCA 90 bp GCTGCTGCGGTGGTGGGAAGGCTGCCCAGCAGTGAGGAAGGCGAGTaGAGGGGCTGCGGCCGCGGTCAGAGAAGGAGAGACACCAGCAGA +
Preference number: 1 (lower is better)
Translates to: AAAVVGRLPSSEEGE*RGCGRGQRRRDTSR
Trigger: TCTGCTGGTGTCTCTCCTTCTCTGACCGCGGCCGCAGCCCCTGCACTCGCCTTCCTCACTGCTGGGCAGCCTTCCCACCACCGCAGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR GCA 90 bp CCTCCTGGCCGGGGGTCCTCCCCAGGACAGGGCTGCTCAAACAGCTaGATCTTCCATCGGGCAGGGCCCTGCACCAGGGTGACCAGCACA +
Preference number: 1 (lower is better)
Translates to: PPGRGSSPGQGCSNS*IFHRAGPCTRVTST
Trigger: TGTGCTGGTCACCCTGGTGCAGGGCCCTGCCCGATGGAAGATGCAGCTGTTTGAGCAGCCCTGTCCTGGGGAGGACCCCCGGCCAGGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR CCA 90 bp ACAGCGAGACGACACTGCAGATGTTCAGGCTGGCTGGGCACAGCATaGGGGGCAGGCCTCCCGGGCCTTCTTCGGGCTGCTCAGGGCCCA +
Preference number: 1 (lower is better)
Translates to: TARRHCRCSGWLGTA*GAGLPGLLRAAQGP
Trigger: TGGGCCCTGAGCAGCCCGAAGAAGGCCCGGGAGGCCTGCCCCCCATGCTGTGCCCAGCCAGCCTGAACATCTGCAGTGTCGTCTCGCTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR CCA 90 bp GATGGGGGCAGGTACTCGGCCCGCAGGGAGGCGGGTCCTGCTGGCTaGCTGCCAGGCTCCCGACAAGTTTCCAGAAAAGTGGCCACAGGG +
Preference number: 1 (lower is better)
Translates to: DGGRYSARREAGPAG*LPGSRQVSRKVATG
Trigger: CCCTGTGGCCACTTTTCTGGAAACTTGTCGGGAGCCTGGCAGCCAGCCAGCAGGACCCGCCTCCCTGCGGGCCGAGTACCTGCCCCCATC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR TCA 90 bp GGTCCTCAGAGTCTGAGGGGGCAAGGGCCCCGCCCACCACCTCCCTaGGACTGTAGAACAGCGTGCAGGACACGGTCACGGGCAGGTCGA +
Preference number: 1 (lower is better)
Translates to: GPQSLRGQGPRPPPP*DCRTACRTRSRAGR
Trigger: TCGACCTGCCCGTGACCGTGTCCTGCACGCTGTTCTACAGTCTCAGGGAGGTGGTGGGCGGGGCCCTTGCCCCCTCAGACTCTGAGGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR GCA 90 bp GTGGTGGGAAGGCTGCCCAGCAGTGAGGAAGGCGAGTGCAGGGGCTaGGGCCGCGGTCAGAGAAGGAGAGACACCAGCAGAGGACGCGAA +
Preference number: 1 (lower is better)
Translates to: VVGRLPSSEEGECRG*GRGQRRRDTSRGRE
Trigger: TTCGCGTCCTCTGCTGGTGTCTCTCCTTCTCTGACCGCGGCCGCAGCCCCTGCACTCGCCTTCCTCACTGCTGGGCAGCCTTCCCACCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR GCA 90 bp GGGGCCAGGCCAGGGAAGCGCAGACACTGCAGCATGTCCACTGTGTaGCTGCTCAGGGGCAGGCAAACACCCTCTTGCTCGGGCAGGACG +
Preference number: 1 (lower is better)
Translates to: GARPGKRRHCSMSTV*LLRGRQTPSCSGRT
Trigger: CGTCCTGCCCGAGCAAGAGGGTGTTTGCCTGCCCCTGAGCAGGCACACAGTGGACATGCTGCAGTGTCTGCGCTTCCCTGGCCTGGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR GCA 90 bp AGCCACAGATGGGGGCAGGTACTCGGCCCGCAGGGAGGCGGGTCCTaGTGGCTGGCTGCCAGGCTCCCGACAAGTTTCCAGAAAAGTGGC +
Preference number: 1 (lower is better)
Translates to: SHRWGQVLGPQGGGS*WLAARLPTSFQKSG
Trigger: GCCACTTTTCTGGAAACTTGTCGGGAGCCTGGCAGCCAGCCAGCAGGACCCGCCTCCCTGCGGGCCGAGTACCTGCCCCCATCTGTGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR CCA 90 bp CACAGATGGGGGCAGGTACTCGGCCCGCAGGGAGGCGGGTCCTGCTaGCTGGCTGCCAGGCTCCCGACAAGTTTCCAGAAAAGTGGCCAC +
Preference number: 1 (lower is better)
Translates to: HRWGQVLGPQGGGSC*LAARLPTSFQKSGH
Trigger: GTGGCCACTTTTCTGGAAACTTGTCGGGAGCCTGGCAGCCAGCCAGCAGGACCCGCCTCCCTGCGGGCCGAGTACCTGCCCCCATCTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR GCA 90 bp GCAGAGAAGCACCTCACGGCTCCTACCCGCACTCATCGCGGACAGTaGCTGCAGCGGGAGCGGCGCGAGCACCCTCCCCAGATGAAAACA +
Preference number: 1 (lower is better)
Translates to: AEKHLTAPTRTHRGQ*LQRERREHPPQMKT
Trigger: TGTTTTCATCTGGGGAGGGTGCTCGCGCCGCTCCCGCTGCAGGCACTGTCCGCGATGAGTGCGGGTAGGAGCCGTGAGGTGCTTCTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR GCA 90 bp CCAGGCCAGGGAAGCGCAGACACTGCAGCATGTCCACTGTGTGCCTaGTCAGGGGCAGGCAAACACCCTCTTGCTCGGGCAGGACGTCGG +
Preference number: 1 (lower is better)
Translates to: PGQGSADTAACPLCA*SGAGKHPLARAGRR
Trigger: CCGACGTCCTGCCCGAGCAAGAGGGTGTTTGCCTGCCCCTGAGCAGGCACACAGTGGACATGCTGCAGTGTCTGCGCTTCCCTGGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR GCA 90 bp TCCCGCAGCAGTGTCTCGTGGTTGGCGTGGATCTGGCGGAGGTACTaGACACGGAGATCAGGAGCGCTGGAGCCCTGGGTGGCCTGCTCT +
Preference number: 1 (lower is better)
Translates to: SRSSVSWLAWIWRRY*TRRSGALEPWVACS
Trigger: AGAGCAGGCCACCCAGGGCTCCAGCGCTCCTGATCTCCGTGTGCAGTACCTCCGCCAGATCCACGCCAACCACGAGACACTGCTGCGGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR CCA 90 bp CGGCCGCGGTCAGAGAAGGAGAGACACCAGCAGAGGACGCGAAGCTaGACCGGCCAGGTTCAGAGCCCGCCTCGGTTGCTCCCAATCAGA +
Preference number: 1 (lower is better)
Translates to: RPRSEKERHQQRTRS*TGQVQSPPRLLPIR
Trigger: TCTGATTGGGAGCAACCGAGGCGGGCTCTGAACCTGGCCGGTCCAGCTTCGCGTCCTCTGCTGGTGTCTCTCCTTCTCTGACCGCGGCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR CCA 90 bp TGGCGTGGATCTGGCGGAGGTACTGCACACGGAGATCAGGAGCGCTaGAGCCCTGGGTGGCCTGCTCTGTCACCATCGTCTGCATGCGCC +
Preference number: 1 (lower is better)
Translates to: WRGSGGGTAHGDQER*SPGWPALSPSSACA
Trigger: GGCGCATGCAGACGATGGTGACAGAGCAGGCCACCCAGGGCTCCAGCGCTCCTGATCTCCGTGTGCAGTACCTCCGCCAGATCCACGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR CCA 90 bp GGCCATCAGGGAGACCACAGAGGACCACAGGTGACTGCAGGAGGGTaGCATCAGCTCCAAAGAGGAGCCCGAAGAGGGCGTCCTCCAGCG +
Preference number: 1 (lower is better)
Translates to: GHQGDHRGPQVTAGG*HQLQRGARRGRPPA
Trigger: CGCTGGAGGACGCCCTCTTCGGGCTCCTCTTTGGAGCTGATGCCACCCTCCTGCAGTCACCTGTGGTCCTCTGTGGTCTCCCTGATGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR TCA 90 bp GGTGGTGCTGGTGGTGCAGGAGATGGGTCTGGGGCCCGTGCCGCTTaGCAGCAGTGCACAGCTCACGTTCATGGCCTCGTTGAGGCTTGT +
Preference number: 1 (lower is better)
Translates to: GGAGGAGDGSGARAA*QQCTAHVHGLVEAC
Trigger: ACAAGCCTCAACGAGGCCATGAACGTGAGCTGTGCACTGCTGTCAAGCGGCACGGGCCCCAGACCCATCTCCTGCACCACCAGCACCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR GCA 90 bp GGACAGGGCTGCTCAAACAGCTGCATCTTCCATCGGGCAGGGCCCTaGACCAGGGTGACCAGCACACTGTCCAGCAAGGTGAACGCGCAC +
Preference number: 1 (lower is better)
Translates to: GQGCSNSCIFHRAGP*TRVTSTLSSKVNAH
Trigger: GTGCGCGTTCACCTTGCTGGACAGTGTGCTGGTCACCCTGGTGCAGGGCCCTGCCCGATGGAAGATGCAGCTGTTTGAGCAGCCCTGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR GCA 90 bp CAGCAGAGCTGGCCATCAGGGAGACCACAGAGGACCACAGGTGACTaGAGGAGGGTGGCATCAGCTCCAAAGAGGAGCCCGAAGAGGGCG +
Preference number: 1 (lower is better)
Translates to: QQSWPSGRPQRTTGD*RRVASAPKRSPKRA
Trigger: CGCCCTCTTCGGGCTCCTCTTTGGAGCTGATGCCACCCTCCTGCAGTCACCTGTGGTCCTCTGTGGTCTCCCTGATGGCCAGCTCTGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR CCA 90 bp TGCTCCACGGCCTCCAAGCACTTTCATGAGCGTTCTGCTCCTACGTaGCCAGGTCCTACCTTCCCTGACGGCTCTGGCCAGGCCAGCTCG +
Preference number: 1 (lower is better)
Translates to: CSTASKHFHERSAPT*PGPTFPDGSGQASS
Trigger: CGAGCTGGCCTGGCCAGAGCCGTCAGGGAAGGTAGGACCTGGCCACGTAGGAGCAGAACGCTCATGAAAGTGCTTGGAGGCCGTGGAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR GCA 90 bp AGAGGACGCGAAGCTGGACCGGCCAGGTTCAGAGCCCGCCTCGGTTaGTCCCAATCAGAATCTGCTTTGTGCTCCACGGCCTCCAAGCAC +
Preference number: 1 (lower is better)
Translates to: RGREAGPARFRARLG*SQSESALCSTASKH
Trigger: GTGCTTGGAGGCCGTGGAGCACAAAGCAGATTCTGATTGGGAGCAACCGAGGCGGGCTCTGAACCTGGCCGGTCCAGCTTCGCGTCCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR GCA 90 bp CCACCCGCTGGCCCTTCCTTGGTGTGGCACGAGACCACGGGCACTTaGAGGAGCTCCCTGCATGCTGTTTTGTGCTTTGGTCTCAGGGAG +
Preference number: 1 (lower is better)
Translates to: PPAGPSLVWHETTGT*RSSLHAVLCFGLRE
Trigger: CTCCCTGAGACCAAAGCACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTGCCACACCAAGGAAGGGCCAGCGGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR GCA 90 bp CTGCTGTTCTCTAGCACGCAGGTGGCCATGAGCACATCCTGTGTCTaGAGGCGGCTCCAGGTGGTGCTGGTGGTGCAGGAGATGGGTCTG +
Preference number: 1 (lower is better)
Translates to: LLFSSTQVAMSTSCV*RRLQVVLVVQEMGL
Trigger: CAGACCCATCTCCTGCACCACCAGCACCACCTGGAGCCGCCTGCAGACACAGGATGTGCTCATGGCCACCTGCGTGCTAGAGAACAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR CCA 90 bp GACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGCTTTaGTCTCAGGGAGCACCCTCCTACCTCGGGGTCCCAGAGTGGGCA +
Preference number: 1 (lower is better)
Translates to: DHGHLQELPACCFVL*SQGAPSYLGVPEWA
Trigger: TGCCCACTCTGGGACCCCGAGGTAGGAGGGTGCTCCCTGAGACCAAAGCACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR TCA 90 bp CACACAGCAGAGCTGGCCATCAGGGAGACCACAGAGGACCACAGGTaGCTGCAGGAGGGTGGCATCAGCTCCAAAGAGGAGCCCGAAGAG +
Preference number: 1 (lower is better)
Translates to: HTAELAIRETTEDHR*LQEGGISSKEEPEE
Trigger: CTCTTCGGGCTCCTCTTTGGAGCTGATGCCACCCTCCTGCAGTCACCTGTGGTCCTCTGTGGTCTCCCTGATGGCCAGCTCTGCTGTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR GCA 90 bp CACGAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTaGTTTGGTCTCAGGGAGCACCCTCCTACCTCGGGGTCCCAGAGT +
Preference number: 1 (lower is better)
Translates to: HETTGTCRSSLHAVL*FGLREHPPTSGSQS
Trigger: ACTCTGGGACCCCGAGGTAGGAGGGTGCTCCCTGAGACCAAAGCACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR GCA 90 bp CTGTCACCATCGTCTGCATGCGCCCGACAACGGCATGGTGCGCCCTaGAAATGTCGGCCAGAGAGGAGCTTTCCACTTGAATCTCCACGG +
Preference number: 1 (lower is better)
Translates to: LSPSSACARQRHGAP*KCRPERSFPLESPR
Trigger: CCGTGGAGATTCAAGTGGAAAGCTCCTCTCTGGCCGACATTTGCAGGGCGCACCATGCCGTTGTCGGGCGCATGCAGACGATGGTGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR TCA 90 bp CAGGTGATGGAGGATCTTGACAAGGGCATTTGGGTCACCAGGGGCTaGCCTGGAGGTGACCAGGGCCTTCAGGATCACACAGCAGAGCTG +
Preference number: 1 (lower is better)
Translates to: QVMEDLDKGIWVTRG*PGGDQGLQDHTAEL
Trigger: CAGCTCTGCTGTGTGATCCTGAAGGCCCTGGTCACCTCCAGGTCAGCCCCTGGTGACCCAAATGCCCTTGTCAAGATCCTCCATCACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR TCA 90 bp GGCTCTGTCTTCAAGGCCCCTATGAAGATGACGGGCTCCTCCAGGTaGTGGAGGATCTTGACAAGGGCATTTGGGTCACCAGGGGCTGAC +
Preference number: 1 (lower is better)
Translates to: GSVFKAPMKMTGSSR*WRILTRAFGSPGAD
Trigger: GTCAGCCCCTGGTGACCCAAATGCCCTTGTCAAGATCCTCCATCACCTGGAGGAGCCCGTCATCTTCATAGGGGCCTTGAAGACAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR TCA 90 bp CCGTGCCGCTTGACAGCAGTGCACAGCTCACGTTCATGGCCTCGTTaGGGCTTGTCAGTGCCTTGTTCCGCTGGTCAACCGCCTTCTTTA +
Preference number: 1 (lower is better)
Translates to: PCRLTAVHSSRSWPR*GLSVPCSAGQPPSL
Trigger: TAAAGAAGGCGGTTGACCAGCGGAACAAGGCACTGACAAGCCTCAACGAGGCCATGAACGTGAGCTGTGCACTGCTGTCAAGCGGCACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR GCA 90 bp AGGTTCAGAGCCCGCCTCGGTTGCTCCCAATCAGAATCTGCTTTGTaGTCCACGGCCTCCAAGCACTTTCATGAGCGTTCTGCTCCTACG +
Preference number: 1 (lower is better)
Translates to: RFRARLGCSQSESAL*STASKHFHERSAPT
Trigger: CGTAGGAGCAGAACGCTCATGAAAGTGCTTGGAGGCCGTGGAGCACAAAGCAGATTCTGATTGGGAGCAACCGAGGCGGGCTCTGAACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR TCA 90 bp CTCTCAGAGATGTTGCCAATTCCAGACAGCAGCTCCTTTATTTTCTaGCCTGCACTCTCTGTGGTCATCCTGGCTGGGCCAGGCATCTCA +
Preference number: 1 (lower is better)
Translates to: LSEMLPIPDSSSFIF*PALSVVILAGPGIS
Trigger: TGAGATGCCTGGCCCAGCCAGGATGACCACAGAGAGTGCAGGTCAGAAAATAAAGGAGCTGCTGTCTGGAATTGGCAACATCTCTGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR CCA 90 bp CTCACGTTCATGGCCTCGTTGAGGCTTGTCAGTGCCTTGTTCCGCTaGTCAACCGCCTTCTTTAGAAAAGACACTCTCTCAGAGATGTTG +
Preference number: 1 (lower is better)
Translates to: LTFMASLRLVSALFR*STAFFRKDTLSEML
Trigger: CAACATCTCTGAGAGAGTGTCTTTTCTAAAGAAGGCGGTTGACCAGCGGAACAAGGCACTGACAAGCCTCAACGAGGCCATGAACGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR-3UTR CCA 90 bp CTCCCGCCGAGCACCGGGGCCGAGCTGGTCCACGGGGATGGTGTAGGTGATGGCTGGTGGTGCAGGAGATaGGTCTGGGGCCCGTGCCGC +
Preference number: 2 (lower is better)
Translates to: LPPSTGAELVHGDGVGDGWWCRR*VWGPCR
Trigger: GCGGCACGGGCCCCAGACCCATCTCCTGCACCACCA...GCCATCACCTACACCATCCCCGTGGACCAGCTCGGCCCCGGTGCTCGGCGGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR-3UTR TCA 90 bp CACGGCTCCTACCCGCACTCATCGCGGACAGTGCCTGCAGCGGGAGCGGCGCGAAGGTCCTACCTTCCCTaGCGGCTCTGGCCAGGCCAG +
Preference number: 2 (lower is better)
Translates to: HGSYPHSSRTVPAAGAARRSYLP*RLWPGQ
Trigger: CTGGCCTGGCCAGAGCCGTCAGGGAAGGTAGGACCT...TCGCGCCGCTCCCGCTGCAGGCACTGTCCGCGATGAGTGCGGGTAGGAGCCGTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR-3UTR TCA 90 bp CAGCGGGAGCGGCGCGAGCACCCTCCCCAGATGAAAACACCAGCACCAGGAGGTGGCCGTAGCCCAGGCTaGGGGAGGAGGCTGGGGGCT +
Preference number: 2 (lower is better)
Translates to: QRERREHPPQMKTPAPGGGRSPG*GRRLGA
Trigger: AGCCCCCAGCCTCCTCCCTCAGCCTGGGCTACGGCC...ACCTCCTGGTGCTGGTGTTTTCATCTGGGGAGGGTGCTCGCGCCGCTCCCGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR-3UTR TCA 90 bp CTGCGGTGGTGGGAAGGCTGCCCAGCAGTGAGGAAGGCGAGTGCAGGGGCTGCGAGGTCCTACCTTCCCTaGCGGCTCTGGCCAGGCCAG +
Preference number: 2 (lower is better)
Translates to: LRWWEGCPAVRKASAGAARSYLP*RLWPGQ
Trigger: CTGGCCTGGCCAGAGCCGTCAGGGAAGGTAGGACCT...CGCAGCCCCTGCACTCGCCTTCCTCACTGCTGGGCAGCCTTCCCACCACCGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR-3UTR TCA 90 bp TGCCCAGCAGTGAGGAAGGCGAGTGCAGGGGCTGCGGCCGCGGTCAGAGAAGGATGGGGCTGCTCGCTCTaGAGCAGTCCGGGGGCAGCA +
Preference number: 2 (lower is better)
Translates to: CPAVRKASAGAAAAVREGWGCSL*SSPGAA
Trigger: TGCTGCCCCCGGACTGCTTCAGAGCGAGCAGCCCCA...TCCTTCTCTGACCGCGGCCGCAGCCCCTGCACTCGCCTTCCTCACTGCTGGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR-3UTR TCA 90 bp CGGTGGCACAGGAGCTGGCCTCATCCTCCGTGCAGAGCCGGTCGCGCAGGGTCTCGGGGATGGTGTAGGTaGTGGCGGAGCAGGCCGAGT +
Preference number: 2 (lower is better)
Translates to: RWHRSWPHPPCRAGRAGSRGWCR*WRSRPS
Trigger: ACTCGGCCTGCTCCGCCATCACCTACACCATCCCCG...AGACCCTGCGCGACCGGCTCTGCACGGAGGATGAGGCCAGCTCCTGTGCCACCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR-3UTR GCA 90 bp TGGCGCCATCAGGGGCCACTCCCTGGATGGAAGATAGTGCTCGGGCCCTCACGATGGGGTGAGCGCAGCTaGCTCCCTCCCCGGGTGCCC +
Preference number: 2 (lower is better)
Translates to: WRHQGPLPGWKIVLGPSRWGERS*LPPRVP
Trigger: GGGCACCCGGGGAGGGAGGCAGCTGCGCTCACCCCA...TCGTGAGGGCCCGAGCACTATCTTCCATCCAGGGAGTGGCCCCTGATGGCGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000545865.1
3UTR-3UTR TCA 90 bp TCACGGCTCCTACCCGCACTCATCGCGGACAGTGCCTGCAGCGGGAGCGGCGCGTCTCGGACGATGAGGTaGACGTTGGCGCCATCAGGG +
Preference number: 2 (lower is better)
Translates to: SRLLPALIADSACSGSGASRTMR*TLAPSG
Trigger: CCCTGATGGCGCCAACGTTCACCTCATCGTCCGAGA...CGCGCCGCTCCCGCTGCAGGCACTGTCCGCGATGAGTGCGGGTAGGAGCCGTGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR-3UTR GCA 90 bp GAGGACGCGAAGCTGGACCGGCCAGGTTCAGAGCCCGCCTCGGTTGCTCCCAATCCTGGCCTCAGGGGCTaGTGCGGTGGTGGGAAGGCT +
Preference number: 2 (lower is better)
Translates to: EDAKLDRPGSEPASVAPNPGLRG*CGGGKA
Trigger: AGCCTTCCCACCACCGCAGCAGCCCCTGAGGCCAGG...ATTGGGAGCAACCGAGGCGGGCTCTGAACCTGGCCGGTCCAGCTTCGCGTCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR-3UTR GCA 90 bp GGCCTTTGGCGGACAGGGCCAGGAGCTTGGTGCCACCTTCATGCGTCCTGGGAGCAGAGGGGCAGCCGGTaGTCCTGGTGGTGTGGCAGC +
Preference number: 2 (lower is better)
Translates to: GLWRTGPGAWCHLHASWEQRGSR*SWWCGS
Trigger: GCTGCCACACCACCAGGAGCACCGGCTGCCCCTCTG...CTCCCAGGACGCATGAAGGTGGCACCAAGCTCCTGGCCCTGTCCGCCAAAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR-3UTR GCA 90 bp CAGCGGGAGCGGCGCGAGCACCCTCCCCAGATGAAAACACCAGCACCAGGAGGTACTCATCGCGGACAGTaGCTGCAGCGGGAGCGGCGC +
Preference number: 2 (lower is better)
Translates to: QRERREHPPQMKTPAPGGTHRGQ*LQRERR
Trigger: GCGCCGCTCCCGCTGCAGGCACTGTCCGCGATGAGT...ACCTCCTGGTGCTGGTGTTTTCATCTGGGGAGGGTGCTCGCGCCGCTCCCGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR-3UTR GCA 90 bp GCACCTCACGGCTCCTACCCGCACTCATCGCGGACAGTGCCTGCAGCGGGAGCGCCGACAACGGCATGGTaGGCCCTGCAAATGTCGGCC +
Preference number: 2 (lower is better)
Translates to: APHGSYPHSSRTVPAAGAPTTAW*ALQMSA
Trigger: GGCCGACATTTGCAGGGCGCACCATGCCGTTGTCGG...CGCTCCCGCTGCAGGCACTGTCCGCGATGAGTGCGGGTAGGAGCCGTGAGGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR-3UTR CCA 90 bp CTGTTTCTCTGGCCCTCCGGGTCCAGAATGCCCTGCACTGCCTCCTGGCCTCAGCCGAGGCTTCAGAGCTaGCGGCAGCCCGGGTCCCCA +
Preference number: 2 (lower is better)
Translates to: LFLWPSGSRMPCTASWPQPRLQS*RQPGSP
Trigger: TGGGGACCCGGGCTGCCGCCAGCTCTGAAGCCTCGG...CTGAGGCCAGGAGGCAGTGCAGGGCATTCTGGACCCGGAGGGCCAGAGAAACAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR-3UTR TCA 90 bp GCTGCTCAGGGCCCAGCGGGGTGCTTCCCCGAGACAGATCCACCACACAGAGGTAAGGCTGCCCAGCAGTaGGGAAGGCGAGTGCAGGGG +
Preference number: 2 (lower is better)
Translates to: AAQGPAGCFPETDPPHRGKAAQQ*GRRVQG
Trigger: CCCCTGCACTCGCCTTCCTCACTGCTGGGCAGCCTT...ACCTCTGTGTGGTGGATCTGTCTCGGGGAAGCACCCCGCTGGGCCCTGAGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR-3UTR TCA 90 bp ACGTTGGCGCCATCAGGGGCCACTCCCTGGATGGAAGATAGTGCTCGGGCCCTCGGTCCCCAAGCGCGATaGGGTGGGGCTGCTCGCTCT +
Preference number: 2 (lower is better)
Translates to: TLAPSGATPWMEDSARALGPQAR*GGAARS
Trigger: AGAGCGAGCAGCCCCACCTCATCGCGCTTGGGGACC...GAGGGCCCGAGCACTATCTTCCATCCAGGGAGTGGCCCCTGATGGCGCCAACGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR-3UTR TCA 90 bp GGCCTTTGGCGGACAGGGCCAGGAGCTTGGTGCCACCTTCATGCGTCCTGGGAGAGCATCCGGCCGTGGTaGCCAAAGGCCACCAGGCAG +
Preference number: 2 (lower is better)
Translates to: GLWRTGPGAWCHLHASWESIRPW*PKATRQ
Trigger: CTGCCTGGTGGCCTTTGGTCACCACGGCCGGATGCT...CTCCCAGGACGCATGAAGGTGGCACCAAGCTCCTGGCCCTGTCCGCCAAAGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR-3UTR GCA 90 bp CAGAGTGGGCAGCCGGGCAGGTGTGAACAGTGTGACAAGGGTACCGTGGGGCACAGTGAGGAAGGCGAGTaGAGGGGCTGCGGCCGCGGT +
Preference number: 2 (lower is better)
Translates to: QSGQPGRCEQCDKGTVGHSEEGE*RGCGRG
Trigger: ACCGCGGCCGCAGCCCCTGCACTCGCCTTCCTCACT...GTGCCCCACGGTACCCTTGTCACACTGTTCACACCTGCCCGGCTGCCCACTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR-3UTR GCA 90 bp CGCCCGACAACGGCATGGTGCGCCCTGCAAATGTCGGCCAGAGAGGAGCTTTCCGCCTCCCTCCCCGGGTaGCCGCACTGTGAAGCTCAC +
Preference number: 2 (lower is better)
Translates to: RPTTAWCALQMSAREELSASLPG*PHCEAH
Trigger: GTGAGCTTCACAGTGCGGGCACCCGGGGAGGGAGGC...GGAAAGCTCCTCTCTGGCCGACATTTGCAGGGCGCACCATGCCGTTGTCGGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545865.1
3UTR-3UTR CCA 90 bp CTGCTGCGGTGGTGGGAAGGCTGCCCAGCAGTGAGGAAGGCGAGTGCAGGGGCTCAGAGGACGCGAAGCTaGACCGGCCAGGTTCAGAGC +
Preference number: 2 (lower is better)
Translates to: LLRWWEGCPAVRKASAGAQRTRS*TGQVQS
Trigger: GCTCTGAACCTGGCCGGTCCAGCTTCGCGTCCTCTG...AGCCCCTGCACTCGCCTTCCTCACTGCTGGGCAGCCTTCCCACCACCGCAGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR-3UTR CCA 90 bp TCACGGCTCCTACCCGCACTCATCGCGGACAGTGCCTGCAGCGGGAGCGGCGCGAATAGTGCACAGTGCTaGGTACTGCCCCGGCTGGAG +
Preference number: 2 (lower is better)
Translates to: SRLLPALIADSACSGSGANSAQC*VLPRLE
Trigger: CTCCAGCCGGGGCAGTACCCAGCACTGTGCACTATT...CGCGCCGCTCCCGCTGCAGGCACTGTCCGCGATGAGTGCGGGTAGGAGCCGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR-3UTR CCA 90 bp GAAGCACCTCACGGCTCCTACCCGCACTCATCGCGGACAGTGCCTGCAGCGGGAACCAGCACCAGGAGGTaGGCCGTAGCCCAGGCTGAG +
Preference number: 2 (lower is better)
Translates to: EAPHGSYPHSSRTVPAAGTSTRR*AVAQAE
Trigger: CTCAGCCTGGGCTACGGCCCACCTCCTGGTGCTGGT...TCCCGCTGCAGGCACTGTCCGCGATGAGTGCGGGTAGGAGCCGTGAGGTGCTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR CAA 90 bp GAGTGGCCGTCCTTCAAGGCAGCTCTGAGCAGCTCCGCCGACACCTaGATGGAAGCCACAGATGGGGGCAGGTACTCGGCCCGCAGGGAG +
Preference number: 2 (lower is better)
Translates to: EWPSFKAALSSSADT*MEATDGGRYSARRE
Trigger: CTCCCTGCGGGCCGAGTACCTGCCCCCATCTGTGGCTTCCATCAAGGTGTCGGCGGAGCTGCTCAGAGCTGCCTTGAAGGACGGCCACTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR-3UTR GCA 90 bp CGTTTGTCACAGCAGAGAAGCACCTCACGGCTCCTACCCGCACTCATCGCGGACGGCGAGTGCAGGGGCTaGGGCCGCGGTCAGAGAAGG +
Preference number: 2 (lower is better)
Translates to: RLSQQRSTSRLLPALIADGECRG*GRGQRR
Trigger: CCTTCTCTGACCGCGGCCGCAGCCCCTGCACTCGCC...GTCCGCGATGAGTGCGGGTAGGAGCCGTGAGGTGCTTCTCTGCTGTGACAAACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR-3UTR GCA 90 bp GGCCTCCCGGGCCTTCTTCGGGCTGCTCAGGGCCCAGCGGGGTGCTTCCCCGAGCAGGAGCTCCCTGCATaGTGTTTTGTGCTTTGGTCT +
Preference number: 2 (lower is better)
Translates to: GLPGLLRAAQGPAGCFPEQELPA*CFVLWS
Trigger: AGACCAAAGCACAAAACAGCATGCAGGGAGCTCCTG...CTCGGGGAAGCACCCCGCTGGGCCCTGAGCAGCCCGAAGAAGGCCCGGGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR-3UTR CCA 90 bp CCTGTTTCTCTGGCCCTCCGGGTCCAGAATGCCCTGCACTGCCTCCTGGCCTCACCGCTGGCCCTTCCTTaGTGTGGCACGAGACCACGG +
Preference number: 2 (lower is better)
Translates to: PVSLALRVQNALHCLLASPLALP*CGTRPR
Trigger: CCGTGGTCTCGTGCCACACCAAGGAAGGGCCAGCGG...TGAGGCCAGGAGGCAGTGCAGGGCATTCTGGACCCGGAGGGCCAGAGAAACAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR-3UTR CCA 90 bp GGCAGGTGTGAACAGTGTGACAAGGGTACCGTGGGGCACCTGGTAGTGCCACCCTCCACCTCACCGATCTaGCCTCCTGGCCGGGGGTCC +
Preference number: 2 (lower is better)
Translates to: GRCEQCDKGTVGHLVVPPSTSPI*PPGRGS
Trigger: GGACCCCCGGCCAGGAGGCCAGATCGGTGAGGTGGA...GGGTGGCACTACCAGGTGCCCCACGGTACCCTTGTCACACTGTTCACACCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR-3UTR CCA 90 bp GAGGACGCGAAGCTGGACCGGCCAGGTTCAGAGCCCGCCTCGGTTGCTCCCAATGATGGAAGCCACAGATaGGGGCAGGTACTCGGCCCG +
Preference number: 2 (lower is better)
Translates to: EDAKLDRPGSEPASVAPNDGSHR*GQVLGP
Trigger: CGGGCCGAGTACCTGCCCCCATCTGTGGCTTCCATC...ATTGGGAGCAACCGAGGCGGGCTCTGAACCTGGCCGGTCCAGCTTCGCGTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR-3UTR TCA 90 bp TCCCCAGATGAAAACACCAGCACCAGGAGGTGGGCCGTAGCCCAGGCTGAGGGAAGGTCCTACCTTCCCTaGCGGCTCTGGCCAGGCCAG +
Preference number: 2 (lower is better)
Translates to: SPDENTSTRRWAVAQAEGRSYLP*RLWPGQ
Trigger: CTGGCCTGGCCAGAGCCGTCAGGGAAGGTAGGACCT...TCCCTCAGCCTGGGCTACGGCCCACCTCCTGGTGCTGGTGTTTTCATCTGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR-3UTR TCA 90 bp GAAGCACCTCACGGCTCCTACCCGCACTCATCGCGGACAGTGCCTGCAGCGGGACACTGTCCAGCAAGGTaGACGCGCACAGCGCAGCAT +
Preference number: 2 (lower is better)
Translates to: EAPHGSYPHSSRTVPAAGHCPAR*TRTAQH
Trigger: ATGCTGCGCTGTGCGCGTTCACCTTGCTGGACAGTG...TCCCGCTGCAGGCACTGTCCGCGATGAGTGCGGGTAGGAGCCGTGAGGTGCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR-3UTR TCA 90 bp TGGCGCCATCAGGGGCCACTCCCTGGATGGAAGATAGTGCTCGGGCCCTCACGAGGGCTGACCTGGAGGTaGCCAGGGCCTTCAGGATCA +
Preference number: 2 (lower is better)
Translates to: WRHQGPLPGWKIVLGPSRGLTWR*PGPSGS
Trigger: TGATCCTGAAGGCCCTGGTCACCTCCAGGTCAGCCC...TCGTGAGGGCCCGAGCACTATCTTCCATCCAGGGAGTGGCCCCTGATGGCGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR-3UTR GCA 90 bp GTGTGGCACGAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGCCAGAGGGGCAGCCGGTaGTCCTGGTGGTGTGGCAGC +
Preference number: 2 (lower is better)
Translates to: VWHETTGTCRSSLHAVLCQRGSR*SWWCGS
Trigger: GCTGCCACACCACCAGGAGCACCGGCTGCCCCTCTG...GCACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTGCCACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR-3UTR CCA 90 bp CAGCAGAGGACGCGAAGCTGGACCGGCCAGGTTCAGAGCCCGCCTCGGTTGCTCCGTTCTGCTCCTACGTaGCCAGGTCCTACCTTCCCT +
Preference number: 2 (lower is better)
Translates to: QQRTRSWTGQVQSPPRLLRSAPT*PGPTFP
Trigger: AGGGAAGGTAGGACCTGGCCACGTAGGAGCAGAACG...GAGCAACCGAGGCGGGCTCTGAACCTGGCCGGTCCAGCTTCGCGTCCTCTGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR-3UTR CCA 90 bp GCCTTTGGCGGACAGGGCCAGGAGCTTGGTGCCACCTTCATGCGTCCTGGGAGACAGAGGACGCGAAGCTaGACCGGCCAGGTTCAGAGC +
Preference number: 2 (lower is better)
Translates to: AFGGQGQELGATFMRPGRQRTRS*TGQVQS
Trigger: GCTCTGAACCTGGCCGGTCCAGCTTCGCGTCCTCTG...TCTCCCAGGACGCATGAAGGTGGCACCAAGCTCCTGGCCCTGTCCGCCAAAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR-3UTR CCA 90 bp CGTTTGTCACAGCAGAGAAGCACCTCACGGCTCCTACCCGCACTCATCGCGGACGGGCTGCTGCGGTGGTaGGAAGGCTGCCCAGCAGTG +
Preference number: 2 (lower is better)
Translates to: RLSQQRSTSRLLPALIADGLLRW*EGCPAV
Trigger: CACTGCTGGGCAGCCTTCCCACCACCGCAGCAGCCC...GTCCGCGATGAGTGCGGGTAGGAGCCGTGAGGTGCTTCTCTGCTGTGACAAACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR-3UTR CCA 90 bp GTGGCCCTGAAAATAGTGCACAGTGCTGGGTACTGCCCCGGCTGGAGGCACCTAGGGCTGCTGCGGTGGTaGGAAGGCTGCCCAGCAGTG +
Preference number: 2 (lower is better)
Translates to: VALKIVHSAGYCPGWRHLGLLRW*EGCPAV
Trigger: CACTGCTGGGCAGCCTTCCCACCACCGCAGCAGCCC...TAGGTGCCTCCAGCCGGGGCAGTACCCAGCACTGTGCACTATTTTCAGGGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR-3UTR CCA 90 bp GGCCCTGAAAATAGTGCACAGTGCTGGGTACTGCCCCGGCTGGAGGCACCTAGTCAGGGGCTGCTGCGGTaGTGGGAAGGCTGCCCAGCA +
Preference number: 2 (lower is better)
Translates to: GPENSAQCWVLPRLEAPSQGLLR*WEGCPA
Trigger: TGCTGGGCAGCCTTCCCACCACCGCAGCAGCCCCTG...ACTAGGTGCCTCCAGCCGGGGCAGTACCCAGCACTGTGCACTATTTTCAGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR-3UTR CCA 90 bp GTCACGGGCAGGTCGAGCCCGCCGTTCTCACCAGGGCCCAGGGGTAGCGTCACCTGCTGTTTTGTGCTTTaGTCTCAGGGAGCACCCTCC +
Preference number: 2 (lower is better)
Translates to: VTGRSSPPFSPGPRGSVTCCFVL*SQGAPS
Trigger: GGAGGGTGCTCCCTGAGACCAAAGCACAAAACAGCA...GGTGACGCTACCCCTGGGCCCTGGTGAGAACGGCGGGCTCGACCTGCCCGTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR-3UTR CCA 90 bp TCCCCAGATGAAAACACCAGCACCAGGAGGTGGGCCGTAGCCCAGGCTGAGGGACCACAGGCCACCCGCTaGCCCTTCCTTGGTGTGGCA +
Preference number: 2 (lower is better)
Translates to: SPDENTSTRRWAVAQAEGPQATR*PFLGVA
Trigger: TGCCACACCAAGGAAGGGCCAGCGGGTGGCCTGTGG...TCCCTCAGCCTGGGCTACGGCCCACCTCCTGGTGCTGGTGTTTTCATCTGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR-3UTR CCA 90 bp TGGTGTGGCACGAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTACCGATCTGGCCTCCTaGCCGGGGGTCCTCCCCAGG +
Preference number: 2 (lower is better)
Translates to: WCGTRPRALAGAPCMLFCTDLAS*PGVLPR
Trigger: CCTGGGGAGGACCCCCGGCCAGGAGGCCAGATCGGT...ACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTGCCACACCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR-3UTR TCA 90 bp GCAGAGGACGCGAAGCTGGACCGGCCAGGTTCAGAGCCCGCCTCGGTTGCTCCCCTCCAAGCACTTTCATaGGCGTTCTGCTCCTACGTG +
Preference number: 2 (lower is better)
Translates to: AEDAKLDRPGSEPASVAPLQALS*AFCSYV
Trigger: CACGTAGGAGCAGAACGCTCATGAAAGTGCTTGGAG...GGGAGCAACCGAGGCGGGCTCTGAACCTGGCCGGTCCAGCTTCGCGTCCTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR-3UTR TCA 90 bp GGACAGACAGGGTCGTTTGTCACAGCAGAGAAGCACCTCACGGCTCCTACCCGCAAGGCTGCCCAGCAGTaGGGAAGGCGAGTGCAGGGG +
Preference number: 2 (lower is better)
Translates to: GQTGSFVTAEKHLTAPTRKAAQQ*GRRVQG
Trigger: CCCCTGCACTCGCCTTCCTCACTGCTGGGCAGCCTT...GCGGGTAGGAGCCGTGAGGTGCTTCTCTGCTGTGACAAACGACCCTGTCTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR-3UTR TCA 90 bp ACAGTGCACATCCTCGTCAGGCAGAAAATTCTCTGCAGCTTCTGCAGCCTGTGGGGGCGTCCTCCAGCGTaGAGCCCCCGGAGCCCCCGA +
Preference number: 2 (lower is better)
Translates to: TVHILVRQKILCSFCSLWGRPPA*SPRSPR
Trigger: TCGGGGGCTCCGGGGGCTTCACGCTGGAGGACGCCC...CCACAGGCTGCAGAAGCTGCAGAGAATTTTCTGCCTGACGAGGATGTGCACTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR-3UTR GCA 90 bp CCGAGCACCGGGGCCGAGCTGGTCCACGGGGATGGTGTAGGTGATGGCGGAGCATCAGAATCTGCTTTGTaGTCCACGGCCTCCAAGCAC +
Preference number: 2 (lower is better)
Translates to: PSTGAELVHGDGVGDGGASESAL*STASKH
Trigger: GTGCTTGGAGGCCGTGGAGCACAAAGCAGATTCTGA...TGCTCCGCCATCACCTACACCATCCCCGTGGACCAGCTCGGCCCCGGTGCTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR-3UTR GCA 90 bp GCACCTCACGGCTCCTACCCGCACTCATCGCGGACAGTGCCTGCAGCGGGAGCGCTCCCAATCAGAATCTaGTTTGTGCTCCACGGCCTC +
Preference number: 2 (lower is better)
Translates to: APHGSYPHSSRTVPAAGALPIRI*FVLHGL
Trigger: GAGGCCGTGGAGCACAAAGCAGATTCTGATTGGGAG...CGCTCCCGCTGCAGGCACTGTCCGCGATGAGTGCGGGTAGGAGCCGTGAGGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR-3UTR GCA 90 bp GGCCCTGAAAATAGTGCACAGTGCTGGGTACTGCCCCGGCTGGAGGCACCTAGTCGGTGGTGGGAAGGCTaGCCAGCAGTGAGGAAGGCG +
Preference number: 2 (lower is better)
Translates to: GPENSAQCWVLPRLEAPSRWWEG*PAVRKA
Trigger: CGCCTTCCTCACTGCTGGGCAGCCTTCCCACCACCG...ACTAGGTGCCTCCAGCCGGGGCAGTACCCAGCACTGTGCACTATTTTCAGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR-3UTR GCA 90 bp CGTTTGTCACAGCAGAGAAGCACCTCACGGCTCCTACCCGCACTCATCGCGGACCGGTGGTGGGAAGGCTaGCCAGCAGTGAGGAAGGCG +
Preference number: 2 (lower is better)
Translates to: RLSQQRSTSRLLPALIADRWWEG*PAVRKA
Trigger: CGCCTTCCTCACTGCTGGGCAGCCTTCCCACCACCG...GTCCGCGATGAGTGCGGGTAGGAGCCGTGAGGTGCTTCTCTGCTGTGACAAACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR-3UTR GCA 90 bp TCACGGCTCCTACCCGCACTCATCGCGGACAGTGCCTGCAGCGGGAGCGGCGCGCAGGAGCTCCCTGCATaGTGTTTTGTGCTTTGGTCT +
Preference number: 2 (lower is better)
Translates to: SRLLPALIADSACSGSGAQELPA*CFVLWS
Trigger: AGACCAAAGCACAAAACAGCATGCAGGGAGCTCCTG...CGCGCCGCTCCCGCTGCAGGCACTGTCCGCGATGAGTGCGGGTAGGAGCCGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR-3UTR CCA 90 bp TCACGGCTCCTACCCGCACTCATCGCGGACAGTGCCTGCAGCGGGAGCGGCGCGGTGCTCCTGGTGGTGTaGCAGCAACAGTTACAAACT +
Preference number: 2 (lower is better)
Translates to: SRLLPALIADSACSGSGAVLLVV*QQQLQT
Trigger: AGTTTGTAACTGTTGCTGCCACACCACCAGGAGCAC...CGCGCCGCTCCCGCTGCAGGCACTGTCCGCGATGAGTGCGGGTAGGAGCCGTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR-3UTR CCA 90 bp GGCAGGTGTGAACAGTGTGACAAGGGTACCGTGGGGCACCTGGTAGTGCCACCCGGCAGCCGGTGCTCCTaGTGGTGTGGCAGCAACAGT +
Preference number: 2 (lower is better)
Translates to: GRCEQCDKGTVGHLVVPPGSRCS*WCGSNS
Trigger: ACTGTTGCTGCCACACCACCAGGAGCACCGGCTGCC...GGGTGGCACTACCAGGTGCCCCACGGTACCCTTGTCACACTGTTCACACCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR-3UTR CCA 90 bp TCCCCAGATGAAAACACCAGCACCAGGAGGTGGGCCGTAGCCCAGGCTGAGGGAGGCCCTTCCTTGGTGTaGCACGAGACCACGGGCACT +
Preference number: 2 (lower is better)
Translates to: SPDENTSTRRWAVAQAEGGPSLV*HETTGT
Trigger: AGTGCCCGTGGTCTCGTGCCACACCAAGGAAGGGCC...TCCCTCAGCCTGGGCTACGGCCCACCTCCTGGTGCTGGTGTTTTCATCTGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR-3UTR CCA 90 bp AGGTCGAGAGCACAGGAGCTGGTGAGCACCTGGATGCACAGGGTCCACCCCTGGCACCTTCATGCGTCCTaGGAGACGCGGACAGCGAGA +
Preference number: 2 (lower is better)
Translates to: RSRAQELVSTWMHRVHPWHLHAS*ETRTAR
Trigger: TCTCGCTGTCCGCGTCTCCCAGGACGCATGAAGGTG...CCAGGGGTGGACCCTGTGCATCCAGGTGCTCACCAGCTCCTGTGCTCTCGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR-3UTR CCA 90 bp TGGCGCCATCAGGGGCCACTCCCTGGATGGAAGATAGTGCTCGGGCCCTCACGACCTGATGAACGGTGCTaGGGCTTTGGGGTGAGCGCA +
Preference number: 2 (lower is better)
Translates to: WRHQGPLPGWKIVLGPSRPDERC*GFGVSA
Trigger: TGCGCTCACCCCAAAGCCCCAGCACCGTTCATCAGG...TCGTGAGGGCCCGAGCACTATCTTCCATCCAGGGAGTGGCCCCTGATGGCGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545865.1
3UTR CAA 90 bp CAGAGGACGCGAAGCTGGACCGGCCAGGTTCAGAGCCCGCCTCGGTaGCTCCCAATCAGAATCTGCTTTGTGCTCCACGGCCTCCAAGCA +
Preference number: 2 (lower is better)
Translates to: QRTRSWTGQVQSPPR*LPIRICFVLHGLQA
Trigger: TGCTTGGAGGCCGTGGAGCACAAAGCAGATTCTGATTGGGAGCAACCGAGGCGGGCTCTGAACCTGGCCGGTCCAGCTTCGCGTCCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR CAA 90 bp AGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGCTTaGGTCTCAGGGAGCACCCTCCTACCTCGGGGTCCCAGAGTGGGC +
Preference number: 2 (lower is better)
Translates to: RPRALAGAPCMLFCA*VSGSTLLPRGPRVG
Trigger: GCCCACTCTGGGACCCCGAGGTAGGAGGGTGCTCCCTGAGACCAAAGCACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR CAA 90 bp TGGCACGAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTaGTGCTTTGGTCTCAGGGAGCACCCTCCTACCTCGGGGTCCCAG +
Preference number: 2 (lower is better)
Translates to: WHETTGTCRSSLHAV*CFGLREHPPTSGSQ
Trigger: CTGGGACCCCGAGGTAGGAGGGTGCTCCCTGAGACCAAAGCACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR CAA 90 bp GCCACCCGCTGGCCCTTCCTTGGTGTGGCACGAGACCACGGGCACTaGCAGGAGCTCCCTGCATGCTGTTTTGTGCTTTGGTCTCAGGGA +
Preference number: 2 (lower is better)
Translates to: ATRWPFLGVARDHGH*QELPACCFVLWSQG
Trigger: TCCCTGAGACCAAAGCACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTGCCACACCAAGGAAGGGCCAGCGGGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR-3UTR TCA 90 bp CACCTCTCGGACGATGAGGTGAACGTTGGCGCCATCAGGGGCCACTCCCTGGATCGGGTGCCCGCACTGTaGAGCTCACAGTTTGCTCCT +
Preference number: 2 (lower is better)
Translates to: HLSDDEVNVGAIRGHSLDRVPAL*SSQFAP
Trigger: AGGAGCAAACTGTGAGCTTCACAGTGCGGGCACCCG...ATCCAGGGAGTGGCCCCTGATGGCGCCAACGTTCACCTCATCGTCCGAGAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545865.1
3UTR-3UTR GCA 90 bp GTGAGGAAGGCGAGTGCAGGGGCTGCGGCCGCGGTCAGAGAAGGAGAGACACCAAGAGCCCGCCTCGGTTaGTCCCAATCAGAATCTGCT +
Preference number: 2 (lower is better)
Translates to: VRKASAGAAAAVREGETPRARLG*SQSESA
Trigger: AGCAGATTCTGATTGGGAGCAACCGAGGCGGGCTCT...TGGTGTCTCTCCTTCTCTGACCGCGGCCGCAGCCCCTGCACTCGCCTTCCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR-3UTR GCA 90 bp GAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGCTTTGGTCTCAGTGAGGAAGGCGAGTaGAGGGGCTGCGGCCGCGGT +
Preference number: 2 (lower is better)
Translates to: ETTGTCRSSLHAVLCFGLSEEGE*RGCGRG
Trigger: ACCGCGGCCGCAGCCCCTGCACTCGCCTTCCTCACT...GAGACCAAAGCACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR-3UTR GCA 90 bp CACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGCTTTGGTCTCAGGGAGCACCCCCTGGCCTCAGGGGCTaGTGCGGTGGTGGGAAGGCT +
Preference number: 2 (lower is better)
Translates to: HLQELPACCFVLWSQGAPPGLRG*CGGGKA
Trigger: AGCCTTCCCACCACCGCAGCAGCCCCTGAGGCCAGG...GGGTGCTCCCTGAGACCAAAGCACAAAACAGCATGCAGGGAGCTCCTGCAAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR-3UTR GCA 90 bp TGGCGCCATCAGGGGCCACTCCCTGGATGGAAGATAGTGCTCGGGCCCTCACGAGGGAAGCGCAGACACTaGAGCATGTCCACTGTGTGC +
Preference number: 2 (lower is better)
Translates to: WRHQGPLPGWKIVLGPSRGKRRH*SMSTVC
Trigger: GCACACAGTGGACATGCTGCAGTGTCTGCGCTTCCC...TCGTGAGGGCCCGAGCACTATCTTCCATCCAGGGAGTGGCCCCTGATGGCGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR-3UTR CCA 90 bp GGTGTGGCACGAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGCAGAGGACGCGAAGCTaGACCGGCCAGGTTCAGAGC +
Preference number: 2 (lower is better)
Translates to: GVARDHGHLQELPACCFVQRTRS*TGQVQS
Trigger: GCTCTGAACCTGGCCGGTCCAGCTTCGCGTCCTCTG...CACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTGCCACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR-3UTR CCA 90 bp GTGGCCCTGAAAATAGTGCACAGTGCTGGGTACTGCCCCGGCTGGAGGCACCTAGGCAGCCGGTGCTCCTaGTGGTGTGGCAGCAACAGT +
Preference number: 2 (lower is better)
Translates to: VALKIVHSAGYCPGWRHLGSRCS*WCGSNS
Trigger: ACTGTTGCTGCCACACCACCAGGAGCACCGGCTGCC...TAGGTGCCTCCAGCCGGGGCAGTACCCAGCACTGTGCACTATTTTCAGGGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR-3UTR CCA 90 bp GGTGTGGCACGAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGATCACGGGGGAAGGCTaGTCACCGTCCTCGCTGTCC +
Preference number: 2 (lower is better)
Translates to: GVARDHGHLQELPACCFVITGEG*SPSSLS
Trigger: GGACAGCGAGGACGGTGACCAGCCTTCCCCCGTGAT...CACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTGCCACACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR-3UTR CCA 90 bp GGACAGACAGGGTCGTTTGTCACAGCAGAGAAGCACCTCACGGCTCCTACCCGCGGTCGTGCGGGACCCTaGAGCCTGATGGTGACACAG +
Preference number: 2 (lower is better)
Translates to: GQTGSFVTAEKHLTAPTRGRAGP*SLMVTQ
Trigger: CTGTGTCACCATCAGGCTCCAGGGTCCCGCACGACC...GCGGGTAGGAGCCGTGAGGTGCTTCTCTGCTGTGACAAACGACCCTGTCTGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR-3UTR TCA 90 bp CGTTTGTCACAGCAGAGAAGCACCTCACGGCTCCTACCCGCACTCATCGCGGACGAGGCACCTAGTTGTTaGGCATTCCGGCCACAGGCC +
Preference number: 2 (lower is better)
Translates to: RLSQQRSTSRLLPALIADEAPSC*AFRPQA
Trigger: GGCCTGTGGCCGGAATGCTCAACAACTAGGTGCCTC...GTCCGCGATGAGTGCGGGTAGGAGCCGTGAGGTGCTTCTCTGCTGTGACAAACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR-3UTR GCA 90 bp GGCACGAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGCTTTGCAGAATGCCCTGCACTaGCTCCTGGCCTCAGGGGCT +
Preference number: 2 (lower is better)
Translates to: GTRPRALAGAPCMLFCALQNALH*LLASGA
Trigger: AGCCCCTGAGGCCAGGAGGCAGTGCAGGGCATTCTG...CAAAGCACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR-3UTR GCA 90 bp GGACAGACAGGGTCGTTTGTCACAGCAGAGAAGCACCTCACGGCTCCTACCCGCAGTCCAGGTCCAGGCTaGAGGTCATCAGGCGGCCTT +
Preference number: 2 (lower is better)
Translates to: GQTGSFVTAEKHLTAPTRSPGPG*RSSGGL
Trigger: AAGGCCGCCTGATGACCTGCAGCCTGGACCTGGACT...GCGGGTAGGAGCCGTGAGGTGCTTCTCTGCTGTGACAAACGACCCTGTCTGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR-3UTR CCA 90 bp CCAGCATCCGGCCGTGGTGACCAAAGGCCACCAGGCAGTCACAGTGCACATCCTAGCCGGTGCTCCTGGTaGTGTGGCAGCAACAGTTAC +
Preference number: 2 (lower is better)
Translates to: PASGRGDQRPPGSHSAHPSRCSW*CGSNSY
Trigger: GTAACTGTTGCTGCCACACCACCAGGAGCACCGGCT...AGGATGTGCACTGTGACTGCCTGGTGGCCTTTGGTCACCACGGCCGGATGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR-3UTR GCA 90 bp GAGGACGCGAAGCTGGACCGGCCAGGTTCAGAGCCCGCCTCGGTTGCTCCCAATCTGCATGCTGTTTTGTaGTTTGGTCTCAGGGAGCAC +
Preference number: 2 (lower is better)
Translates to: EDAKLDRPGSEPASVAPNLHAVL*FGLREH
Trigger: GTGCTCCCTGAGACCAAAGCACAAAACAGCATGCAG...ATTGGGAGCAACCGAGGCGGGCTCTGAACCTGGCCGGTCCAGCTTCGCGTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR-3UTR GCA 90 bp GAAGCACCTCACGGCTCCTACCCGCACTCATCGCGGACAGTGCCTGCAGCGGGACTTGCAGGAGCTCCCTaGATGCTGTTTTGTGCTTTG +
Preference number: 2 (lower is better)
Translates to: EAPHGSYPHSSRTVPAAGLAGAP*MLFCAL
Trigger: CAAAGCACAAAACAGCATGCAGGGAGCTCCTGCAAG...TCCCGCTGCAGGCACTGTCCGCGATGAGTGCGGGTAGGAGCCGTGAGGTGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR-3UTR GCA 90 bp GTGTGGCACGAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGCGGCTGCTCAAACAGCTaGATCTTCCATCGGGCAGGG +
Preference number: 2 (lower is better)
Translates to: VWHETTGTCRSSLHAVLCGCSNS*IFHRAG
Trigger: CCCTGCCCGATGGAAGATGCAGCTGTTTGAGCAGCC...GCACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTGCCACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR-3UTR GCA 90 bp TGGCGCCATCAGGGGCCACTCCCTGGATGGAAGATAGTGCTCGGGCCCTCACGAGTTGAGGCTTGTCAGTaGCTTGTTCCGCTGGTCAAC +
Preference number: 2 (lower is better)
Translates to: WRHQGPLPGWKIVLGPSRVEACQ*LVPLVN
Trigger: GTTGACCAGCGGAACAAGGCACTGACAAGCCTCAAC...TCGTGAGGGCCCGAGCACTATCTTCCATCCAGGGAGTGGCCCCTGATGGCGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR-3UTR GCA 90 bp AAAATAGTGCACAGTGCTGGGTACTGCCCCGGCTGGAGGCACCTAGTTGTTGAGTGGGTCTGGGGCCCGTaGCGCTTGACAGCAGTGCAC +
Preference number: 2 (lower is better)
Translates to: KIVHSAGYCPGWRHLVVEWVWGP*RLTAVH
Trigger: GTGCACTGCTGTCAAGCGGCACGGGCCCCAGACCCA...CTCAACAACTAGGTGCCTCCAGCCGGGGCAGTACCCAGCACTGTGCACTATTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR-3UTR GCA 90 bp GCGCCCTGCAAATGTCGGCCAGAGAGGAGCTTTCCACTTGAATCTCCACGGCCTACGCCTGATGAACGGTaGTGGGGCTTTGGGGTGAGC +
Preference number: 2 (lower is better)
Translates to: APCKCRPERSFPLESPRPTPDER*WGFGVS
Trigger: GCTCACCCCAAAGCCCCAGCACCGTTCATCAGGCGT...AGGCCGTGGAGATTCAAGTGGAAAGCTCCTCTCTGGCCGACATTTGCAGGGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545865.1
3UTR-3UTR CCA 90 bp AAAATAGTGCACAGTGCTGGGTACTGCCCCGGCTGGAGGCACCTAGTTGTTGAGCCACAGGCCACCCGCTaGCCCTTCCTTGGTGTGGCA +
Preference number: 2 (lower is better)
Translates to: KIVHSAGYCPGWRHLVVEPQATR*PFLGVA
Trigger: TGCCACACCAAGGAAGGGCCAGCGGGTGGCCTGTGG...CTCAACAACTAGGTGCCTCCAGCCGGGGCAGTACCCAGCACTGTGCACTATTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR-3UTR CCA 90 bp CGTTTGTCACAGCAGAGAAGCACCTCACGGCTCCTACCCGCACTCATCGCGGACAATAGTGCACAGTGCTaGGTACTGCCCCGGCTGGAG +
Preference number: 2 (lower is better)
Translates to: RLSQQRSTSRLLPALIADNSAQC*VLPRLE
Trigger: CTCCAGCCGGGGCAGTACCCAGCACTGTGCACTATT...GTCCGCGATGAGTGCGGGTAGGAGCCGTGAGGTGCTTCTCTGCTGTGACAAACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR CAA 90 bp CCCGTGCCGCTTGACAGCAGTGCACAGCTCACGTTCATGGCCTCGTaGAGGCTTGTCAGTGCCTTGTTCCGCTGGTCAACCGCCTTCTTT +
Preference number: 2 (lower is better)
Translates to: PVPLDSSAQLTFMAS*RLVSALFRWSTAFF
Trigger: AAAGAAGGCGGTTGACCAGCGGAACAAGGCACTGACAAGCCTCAACGAGGCCATGAACGTGAGCTGTGCACTGCTGTCAAGCGGCACGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR-3UTR TCA 90 bp GTGCTTCCCCGAGACAGATCCACCACACAGAGGTCAGAAGGGGTGCTGTGGTACACGGGCTCCTCCAGGTaGTGGAGGATCTTGACAAGG +
Preference number: 2 (lower is better)
Translates to: VLPRDRSTTQRSEGVLWYTGSSR*WRILTR
Trigger: CCTTGTCAAGATCCTCCATCACCTGGAGGAGCCCGT...GTACCACAGCACCCCTTCTGACCTCTGTGTGGTGGATCTGTCTCGGGGAAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR-3UTR GCA 90 bp CCTGTTTCTCTGGCCCTCCGGGTCCAGAATGCCCTGCACTGCCTCCTGGCCTCACTGCATGCTGTTTTGTaGTTTGGTCTCAGGGAGCAC +
Preference number: 2 (lower is better)
Translates to: PVSLALRVQNALHCLLASLHAVL*FGLREH
Trigger: GTGCTCCCTGAGACCAAAGCACAAAACAGCATGCAG...TGAGGCCAGGAGGCAGTGCAGGGCATTCTGGACCCGGAGGGCCAGAGAAACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR-3UTR CCA 90 bp GTGGCCCTGAAAATAGTGCACAGTGCTGGGTACTGCCCCGGCTGGAGGCACCTATTGCAGAAAGAGTGCTaGGGGCAGGGGCTCCAGATA +
Preference number: 2 (lower is better)
Translates to: VALKIVHSAGYCPGWRHLLQKEC*GQGLQI
Trigger: TATCTGGAGCCCCTGCCCCCAGCACTCTTTCTGCAA...TAGGTGCCTCCAGCCGGGGCAGTACCCAGCACTGTGCACTATTTTCAGGGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR-3UTR CCA 90 bp TCTCGTGGTTGGCGTGGATCTGGCGGAGGTACTGCACACGGAGATCAGGAGCGCAAGTTTCCAGAAAAGTaGCCACAGGGTCTCGGGTGG +
Preference number: 2 (lower is better)
Translates to: SRGWRGSGGGTAHGDQERKFPEK*PQGLGW
Trigger: CCACCCGAGACCCTGTGGCCACTTTTCTGGAAACTT...GCGCTCCTGATCTCCGTGTGCAGTACCTCCGCCAGATCCACGCCAACCACGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR CAA 90 bp GCCAGGTTCAGAGCCCGCCTCGGTTGCTCCCAATCAGAATCTGCTTaGTGCTCCACGGCCTCCAAGCACTTTCATGAGCGTTCTGCTCCT +
Preference number: 2 (lower is better)
Translates to: ARFRARLGCSQSESA*CSTASKHFHERSAP
Trigger: AGGAGCAGAACGCTCATGAAAGTGCTTGGAGGCCGTGGAGCACAAAGCAGATTCTGATTGGGAGCAACCGAGGCGGGCTCTGAACCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR-3UTR TCA 90 bp AAAATAGTGCACAGTGCTGGGTACTGCCCCGGCTGGAGGCACCTAGTTGTTGAGGAGGCACCTAGTTGTTaGGCATTCCGGCCACAGGCC +
Preference number: 2 (lower is better)
Translates to: KIVHSAGYCPGWRHLVVEEAPSC*AFRPQA
Trigger: GGCCTGTGGCCGGAATGCTCAACAACTAGGTGCCTC...CTCAACAACTAGGTGCCTCCAGCCGGGGCAGTACCCAGCACTGTGCACTATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR-3UTR GCA 90 bp GTGGCACGAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGCTTAGAGCCCGCCTCGGTTaGTCCCAATCAGAATCTGCT +
Preference number: 2 (lower is better)
Translates to: VARDHGHLQELPACCFVLRARLG*SQSESA
Trigger: AGCAGATTCTGATTGGGAGCAACCGAGGCGGGCTCT...AAGCACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR-3UTR GCA 90 bp CACATCCTCGTCAGGCAGAAAATTCTCTGCAGCTTCTGCAGCCTGTGGCTCTGTCACAGTGCTGGGTACTaGCCCGGCTGGAGGCACCTA +
Preference number: 2 (lower is better)
Translates to: HILVRQKILCSFCSLWLCHSAGY*PGWRHL
Trigger: TAGGTGCCTCCAGCCGGGGCAGTACCCAGCACTGTG...ACAGAGCCACAGGCTGCAGAAGCTGCAGAGAATTTTCTGCCTGACGAGGATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR-3UTR GCA 90 bp CAGGGTCGTTTGTCACAGCAGAGAAGCACCTCACGGCTCCTACCCGCACTCATCGAAAATAGTGCACAGTaGTGGGTACTGCCCCGGCTG +
Preference number: 2 (lower is better)
Translates to: QGRLSQQRSTSRLLPALIENSAQ*WVLPRL
Trigger: CAGCCGGGGCAGTACCCAGCACTGTGCACTATTTTC...GATGAGTGCGGGTAGGAGCCGTGAGGTGCTTCTCTGCTGTGACAAACGACCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR-3UTR CCA 90 bp GGCAGGTGTGAACAGTGTGACAAGGGTACCGTGGGGCACCTGGTAGTGCCACCCGTGCTCCTGGTGGTGTaGCAGCAACAGTTACAAACT +
Preference number: 2 (lower is better)
Translates to: GRCEQCDKGTVGHLVVPPVLLVV*QQQLQT
Trigger: AGTTTGTAACTGTTGCTGCCACACCACCAGGAGCAC...GGGTGGCACTACCAGGTGCCCCACGGTACCCTTGTCACACTGTTCACACCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR-3UTR CCA 90 bp AAAATAGTGCACAGTGCTGGGTACTGCCCCGGCTGGAGGCACCTAGTTGTTGAGGGGTACTGCCCCGGCTaGAGGCACCTAGTTGTTGAG +
Preference number: 2 (lower is better)
Translates to: KIVHSAGYCPGWRHLVVEGYCPG*RHLVVE
Trigger: CTCAACAACTAGGTGCCTCCAGCCGGGGCAGTACCC...CTCAACAACTAGGTGCCTCCAGCCGGGGCAGTACCCAGCACTGTGCACTATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR-3UTR GCA 90 bp GTGGCCCTGAAAATAGTGCACAGTGCTGGGTACTGCCCCGGCTGGAGGCACCTACTGCATGCTGTTTTGTaGTTTGGTCTCAGGGAGCAC +
Preference number: 2 (lower is better)
Translates to: VALKIVHSAGYCPGWRHLLHAVL*FGLREH
Trigger: GTGCTCCCTGAGACCAAAGCACAAAACAGCATGCAG...TAGGTGCCTCCAGCCGGGGCAGTACCCAGCACTGTGCACTATTTTCAGGGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR-3UTR GCA 90 bp GGGTCGTTTGTCACAGCAGAGAAGCACCTCACGGCTCCTACCCGCACTCATCGCCTTGCAGGAGCTCCCTaGATGCTGTTTTGTGCTTTG +
Preference number: 2 (lower is better)
Translates to: GSFVTAEKHLTAPTRTHRLAGAP*MLFCAL
Trigger: CAAAGCACAAAACAGCATGCAGGGAGCTCCTGCAAG...GCGATGAGTGCGGGTAGGAGCCGTGAGGTGCTTCTCTGCTGTGACAAACGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR-3UTR GCA 90 bp CACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGCTTTGGTCTCAGGGAGCACCCGAAAATAGTGCACAGTaGTGGGTACTGCCCCGGCTG +
Preference number: 2 (lower is better)
Translates to: HLQELPACCFVLWSQGAPENSAQ*WVLPRL
Trigger: CAGCCGGGGCAGTACCCAGCACTGTGCACTATTTTC...GGGTGCTCCCTGAGACCAAAGCACAAAACAGCATGCAGGGAGCTCCTGCAAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR-3UTR GCA 90 bp CACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGCTTTGGTCTCAGGGAGCACCCACAGCGAGACGACACTaGAGATGTTCAGGCTGGCTG +
Preference number: 2 (lower is better)
Translates to: HLQELPACCFVLWSQGAPTARRH*RCSGWL
Trigger: CAGCCAGCCTGAACATCTGCAGTGTCGTCTCGCTGT...GGGTGCTCCCTGAGACCAAAGCACAAAACAGCATGCAGGGAGCTCCTGCAAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR-3UTR GCA 90 bp GCAACAGTTACAAACTCACCCCAAGTCCAAACCCCAGAAATCCTGTTTCTCTGGCGGTGGTGGGAAGGCTaGCCAGCAGTGAGGAAGGCG +
Preference number: 2 (lower is better)
Translates to: ATVTNSPQVQTPEILFLWRWWEG*PAVRKA
Trigger: CGCCTTCCTCACTGCTGGGCAGCCTTCCCACCACCG...CCAGAGAAACAGGATTTCTGGGGTTTGGACTTGGGGTGAGTTTGTAACTGTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR-3UTR GCA 90 bp ACAGTGCACATCCTCGTCAGGCAGAAAATTCTCTGCAGCTTCTGCAGCCTGTGGAGGACCACAGGTGACTaGAGGAGGGTGGCATCAGCT +
Preference number: 2 (lower is better)
Translates to: TVHILVRQKILCSFCSLWRTTGD*RRVASA
Trigger: AGCTGATGCCACCCTCCTGCAGTCACCTGTGGTCCT...CCACAGGCTGCAGAAGCTGCAGAGAATTTTCTGCCTGACGAGGATGTGCACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR-3UTR GCA 90 bp CACCTCTCGGACGATGAGGTGAACGTTGGCGCCATCAGGGGCCACTCCCTGGATGTGAAGCTCACAGTTTaGTCCTTTGTGACTCTTCTG +
Preference number: 2 (lower is better)
Translates to: HLSDDEVNVGAIRGHSLDVKLTV*SFVTLL
Trigger: CAGAAGAGTCACAAAGGAGCAAACTGTGAGCTTCAC...ATCCAGGGAGTGGCCCCTGATGGCGCCAACGTTCACCTCATCGTCCGAGAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545865.1
3UTR-3UTR CCA 90 bp CAGGGTCGTTTGTCACAGCAGAGAAGCACCTCACGGCTCCTACCCGCACTCATCGTGCTCCTGGTGGTGTaGCAGCAACAGTTACAAACT +
Preference number: 2 (lower is better)
Translates to: QGRLSQQRSTSRLLPALIVLLVV*QQQLQT
Trigger: AGTTTGTAACTGTTGCTGCCACACCACCAGGAGCAC...GATGAGTGCGGGTAGGAGCCGTGAGGTGCTTCTCTGCTGTGACAAACGACCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR-3UTR TCA 90 bp AAAATAGTGCACAGTGCTGGGTACTGCCCCGGCTGGAGGCACCTAGTTGTTGAGCTCCAAGCACTTTCATaGGCGTTCTGCTCCTACGTG +
Preference number: 2 (lower is better)
Translates to: KIVHSAGYCPGWRHLVVELQALS*AFCSYV
Trigger: CACGTAGGAGCAGAACGCTCATGAAAGTGCTTGGAG...CTCAACAACTAGGTGCCTCCAGCCGGGGCAGTACCCAGCACTGTGCACTATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR-3UTR CCA 90 bp GTTACAAACTCACCCCAAGTCCAAACCCCAGAAATCCTGTTTCTCTGGCCCTCCCGTTCTGCTCCTACGTaGCCAGGTCCTACCTTCCCT +
Preference number: 2 (lower is better)
Translates to: VTNSPQVQTPEILFLWPSRSAPT*PGPTFP
Trigger: AGGGAAGGTAGGACCTGGCCACGTAGGAGCAGAACG...GGAGGGCCAGAGAAACAGGATTTCTGGGGTTTGGACTTGGGGTGAGTTTGTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR-3UTR GCA 90 bp CAACAGTTACAAACTCACCCCAAGTCCAAACCCCAGAAATCCTGTTTCTCTGGCCAGCATCGGGAAGGATaGAGGCATCGGGGTCCACAG +
Preference number: 2 (lower is better)
Translates to: QQLQTHPKSKPQKSCFSGQHREG*RHRGPQ
Trigger: CTGTGGACCCCGATGCCTGCATCCTTCCCGATGCTG...GCCAGAGAAACAGGATTTCTGGGGTTTGGACTTGGGGTGAGTTTGTAACTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR CAA 90 bp AGTGCACAGCTCACGTTCATGGCCTCGTTGAGGCTTGTCAGTGCCTaGTTCCGCTGGTCAACCGCCTTCTTTAGAAAAGACACTCTCTCA +
Preference number: 2 (lower is better)
Translates to: SAQLTFMASLRLVSA*FRWSTAFFRKDTLS
Trigger: TGAGAGAGTGTCTTTTCTAAAGAAGGCGGTTGACCAGCGGAACAAGGCACTGACAAGCCTCAACGAGGCCATGAACGTGAGCTGTGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR-3UTR CCA 90 bp CAACAGTTACAAACTCACCCCAAGTCCAAACCCCAGAAATCCTGTTTCTCTGGCAGCCGGTGCTCCTGGTaGTGTGGCAGCAACAGTTAC +
Preference number: 2 (lower is better)
Translates to: QQLQTHPKSKPQKSCFSGSRCSW*CGSNSY
Trigger: GTAACTGTTGCTGCCACACCACCAGGAGCACCGGCT...GCCAGAGAAACAGGATTTCTGGGGTTTGGACTTGGGGTGAGTTTGTAACTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR-3UTR GCA 90 bp CAACAGTTACAAACTCACCCCAAGTCCAAACCCCAGAAATCCTGTTTCTCTGGCTCAGAATCTGCTTTGTaGTCCACGGCCTCCAAGCAC +
Preference number: 2 (lower is better)
Translates to: QQLQTHPKSKPQKSCFSGSESAL*STASKH
Trigger: GTGCTTGGAGGCCGTGGAGCACAAAGCAGATTCTGA...GCCAGAGAAACAGGATTTCTGGGGTTTGGACTTGGGGTGAGTTTGTAACTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR GCA 72 bp CACCTCACGGCTCCTACCCGCACTCATCGCGGACAGTaGCTGCAGCGGGAGCGGCGCGAGCACCCTCCCCAG +
Preference number: 3 (lower is better)
Translates to: HLTAPTRTHRGQ*LQRERREHPPQ
Trigger: CTGGGGAGGGTGCTCGCGCCGCTCCCGCTGCAGGCACTGTCCGCGATGAGTGCGGGTAGGAGCCGTGAGGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR TCA 72 bp TTCAGAGCTGGCGGCAGCCCGGGTCCCCAAGCGCGATaGGGTGGGGCTGCTCGCTCTGAAGCAGTCCGGGGG +
Preference number: 3 (lower is better)
Translates to: FRAGGSPGPQAR*GGAARSEAVRG
Trigger: CCCCCGGACTGCTTCAGAGCGAGCAGCCCCACCTCATCGCGCTTGGGGACCCGGGCTGCCGCCAGCTCTGAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR GCA 72 bp TCTGGGCGGTGGCACAGGAGCTGGCCTCATCCTCCGTaGAGAGCCGGTCGCGCAGGGTCTGCACCTCCCGCA +
Preference number: 3 (lower is better)
Translates to: SGRWHRSWPHPP*RAGRAGSAPPA
Trigger: TGCGGGAGGTGCAGACCCTGCGCGACCGGCTCTGCACGGAGGATGAGGCCAGCTCCTGTGCCACCGCCCAGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR TCA 72 bp GCCTGCAGCGGGAGCGGCGCGAGCACCCTCCCCAGATaGAAACACCAGCACCAGGAGGTGGGCCGTAGCCCA +
Preference number: 3 (lower is better)
Translates to: ACSGSGASTLPR*KHQHQEVGRSP
Trigger: TGGGCTACGGCCCACCTCCTGGTGCTGGTGTTTTCATCTGGGGAGGGTGCTCGCGCCGCTCCCGCTGCAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR TCA 72 bp CACCGGGGCCGAGCTGGTCCACGGGGATGGTGTAGGTaGTGGCGGAGCAGGCCGAGTCCAGGTCGAGAGCAC +
Preference number: 3 (lower is better)
Translates to: HRGRAGPRGWCR*WRSRPSPGREH
Trigger: GTGCTCTCGACCTGGACTCGGCCTGCTCCGCCATCACCTACACCATCCCCGTGGACCAGCTCGGCCCCGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR GCA 72 bp GCCTCATCCTCCGTGCAGAGCCGGTCGCGCAGGGTCTaGACCTCCCGCAGCAGTGTCTCGTGGTTGGCGTGG +
Preference number: 3 (lower is better)
Translates to: ASSSVQSRSRRV*TSRSSVSWLAW
Trigger: CCACGCCAACCACGAGACACTGCTGCGGGAGGTGCAGACCCTGCGCGACCGGCTCTGCACGGAGGATGAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR CCA 72 bp GAGCAGCTCCGCCGACACCTTGATGGAAGCCACAGATaGGGGCAGGTACTCGGCCCGCAGGGAGGCGGGTCC +
Preference number: 3 (lower is better)
Translates to: EQLRRHLDGSHR*GQVLGPQGGGS
Trigger: GGACCCGCCTCCCTGCGGGCCGAGTACCTGCCCCCATCTGTGGCTTCCATCAAGGTGTCGGCGGAGCTGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR CCA 72 bp GGGTGGCGCAGCTGCCGGTACACCTGTAGCAGCCTCTaGGCGGTGGCACAGGAGCTGGCCTCATCCTCCGTG +
Preference number: 3 (lower is better)
Translates to: GWRSCRYTCSSL*AVAQELASSSV
Trigger: CACGGAGGATGAGGCCAGCTCCTGTGCCACCGCCCAGAGGCTGCTACAGGTGTACCGGCAGCTGCGCCACCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR GCA 72 bp CCGGGCCTTCTTCGGGCTGCTCAGGGCCCAGCGGGGTaGTTCCCCGAGACAGATCCACCACACAGAGGTCAG +
Preference number: 3 (lower is better)
Translates to: PGLLRAAQGPAG*FPETDPPHRGQ
Trigger: CTGACCTCTGTGTGGTGGATCTGTCTCGGGGAAGCACCCCGCTGGGCCCTGAGCAGCCCGAAGAAGGCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR CCA 72 bp AGCCCCCGGAGCCCCCGAGGAGGTCGTGCGGGACCCTaGAGCCTGATGGTGACACAGAGCACAGCACTGGAA +
Preference number: 3 (lower is better)
Translates to: SPRSPRGGRAGP*SLMVTQSTALE
Trigger: TTCCAGTGCTGTGCTCTGTGTCACCATCAGGCTCCAGGGTCCCGCACGACCTCCTCGGGGGCTCCGGGGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR CCA 72 bp CATCCTGTGTCTGCAGGCGGCTCCAGGTGGTGCTGGTaGTGCAGGAGATGGGTCTGGGGCCCGTGCCGCTTG +
Preference number: 3 (lower is better)
Translates to: HPVSAGGSRWCW*CRRWVWGPCRL
Trigger: CAAGCGGCACGGGCCCCAGACCCATCTCCTGCACCACCAGCACCACCTGGAGCCGCCTGCAGACACAGGATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR CCA 72 bp GGGCAGGTACTCGGCCCGCAGGGAGGCGGGTCCTGCTaGCTGGCTGCCAGGCTCCCGACAAGTTTCCAGAAA +
Preference number: 3 (lower is better)
Translates to: GQVLGPQGGGSC*LAARLPTSFQK
Trigger: TTTCTGGAAACTTGTCGGGAGCCTGGCAGCCAGCCAGCAGGACCCGCCTCCCTGCGGGCCGAGTACCTGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR-3UTR CAA 90 bp CACCACACAGAGGTCAGAAGGGGTGCTGTGGTACACGCGGCCACCCCCGCCACACGAGACCACGGGCACTaGCAGGAGCTCCCTGCATGC +
Preference number: 3 (lower is better)
Translates to: HHTEVRRGAVVHAATPATRDHGH*QELPAC
Trigger: GCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCG...TGTGGCGGGGGTGGCCGCGTGTACCACAGCACCCCTTCTGACCTCTGTGTGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR-3UTR CAA 90 bp CCTGTTTCTCTGGCCCTCCGGGTCCAGAATGCCCTGCACTGCCTCCTGGCCTCAGTCATCAGGCGGCCTTaGGCGGACAGGGCCAGGAGC +
Preference number: 3 (lower is better)
Translates to: PVSLALRVQNALHCLLASVIRRP*ADRARS
Trigger: GCTCCTGGCCCTGTCCGCCAAAGGCCGCCTGATGAC...TGAGGCCAGGAGGCAGTGCAGGGCATTCTGGACCCGGAGGGCCAGAGAAACAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR TCA 72 bp TGCTGGGTACTGCCCCGGCTGGAGGCACCTAGTTGTTaGGCATTCCGGCCACAGGCCACCCGCTGGCCCTTC +
Preference number: 3 (lower is better)
Translates to: CWVLPRLEAPSC*AFRPQATRWPF
Trigger: GAAGGGCCAGCGGGTGGCCTGTGGCCGGAATGCTCAACAACTAGGTGCCTCCAGCCGGGGCAGTACCCAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR TCA 72 bp CGGGCACCAGCTTCCCGGACTCATCCCAGCTGGCCTTaGTGGCCAGCATCCGGCCGTGGTGACCAAAGGCCA +
Preference number: 3 (lower is better)
Translates to: RAPASRTHPSWP*WPASGRGDQRP
Trigger: TGGCCTTTGGTCACCACGGCCGGATGCTGGCCATCAAGGCCAGCTGGGATGAGTCCGGGAAGCTGGTGCCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR GCA 72 bp AGGCTGCCCAGCAGTGAGGAAGGCGAGTGCAGGGGCTaGGGCCGCGGTCAGAGAAGGAGAGACACCAGCAGA +
Preference number: 3 (lower is better)
Translates to: RLPSSEEGECRG*GRGQRRRDTSR
Trigger: TCTGCTGGTGTCTCTCCTTCTCTGACCGCGGCCGCAGCCCCTGCACTCGCCTTCCTCACTGCTGGGCAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR GCA 72 bp CCCGAGACAGATCCACCACACAGAGGTCAGAAGGGGTaGTGTGGTACACGCGGCCACCCCCGCCACAGGCAG +
Preference number: 3 (lower is better)
Translates to: PETDPPHRGQKG*CGTRGHPRHRQ
Trigger: CTGCCTGTGGCGGGGGTGGCCGCGTGTACCACAGCACCCCTTCTGACCTCTGTGTGGTGGATCTGTCTCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR CCA 72 bp CAGGCATCGGGGTCCACAGGGATCACGGGGGAAGGCTaGTCACCGTCCTCGCTGTCCCTGTCATCCTGGCTC +
Preference number: 3 (lower is better)
Translates to: QASGSTGITGEG*SPSSLSLSSWL
Trigger: GAGCCAGGATGACAGGGACAGCGAGGACGGTGACCAGCCTTCCCCCGTGATCCCTGTGGACCCCGATGCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR CCA 72 bp GGCTCCAGGTGGTGCTGGTGGTGCAGGAGATGGGTCTaGGGCCCGTGCCGCTTGACAGCAGTGCACAGCTCA +
Preference number: 3 (lower is better)
Translates to: GSRWCWWCRRWV*GPCRLTAVHSS
Trigger: TGAGCTGTGCACTGCTGTCAAGCGGCACGGGCCCCAGACCCATCTCCTGCACCACCAGCACCACCTGGAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR CCA 72 bp AGGTACTCGGCCCGCAGGGAGGCGGGTCCTGCTGGCTaGCTGCCAGGCTCCCGACAAGTTTCCAGAAAAGTG +
Preference number: 3 (lower is better)
Translates to: RYSARREAGPAG*LPGSRQVSRKV
Trigger: CACTTTTCTGGAAACTTGTCGGGAGCCTGGCAGCCAGCCAGCAGGACCCGCCTCCCTGCGGGCCGAGTACCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR-3UTR CAA 90 bp GAAGCACCTCACGGCTCCTACCCGCACTCATCGCGGACAGTGCCTGCAGCGGGACAGAGCCCGCCTCGGTaGCTCCCAATCAGAATCTGC +
Preference number: 3 (lower is better)
Translates to: EAPHGSYPHSSRTVPAAGQSPPR*LPIRIC
Trigger: GCAGATTCTGATTGGGAGCAACCGAGGCGGGCTCTG...TCCCGCTGCAGGCACTGTCCGCGATGAGTGCGGGTAGGAGCCGTGAGGTGCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR-3UTR CAA 90 bp GGCCCTGAAAATAGTGCACAGTGCTGGGTACTGCCCCGGCTGGAGGCACCTAGTCCCGCTGGCCCTTCCTaGGTGTGGCACGAGACCACG +
Preference number: 3 (lower is better)
Translates to: GPENSAQCWVLPRLEAPSPAGPS*VWHETT
Trigger: CGTGGTCTCGTGCCACACCAAGGAAGGGCCAGCGGG...ACTAGGTGCCTCCAGCCGGGGCAGTACCCAGCACTGTGCACTATTTTCAGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR TCA 72 bp GCGTTCTGCTCCTACGTGGCCAGGTCCTACCTTCCCTaGCGGCTCTGGCCAGGCCAGCTCGGTTTCCCTCTA +
Preference number: 3 (lower is better)
Translates to: AFCSYVARSYLP*RLWPGQLGFPL
Trigger: TAGAGGGAAACCGAGCTGGCCTGGCCAGAGCCGTCAGGGAAGGTAGGACCTGGCCACGTAGGAGCAGAACGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR TCA 72 bp GGTGGTGCAGGAGATGGGTCTGGGGCCCGTGCCGCTTaGCAGCAGTGCACAGCTCACGTTCATGGCCTCGTT +
Preference number: 3 (lower is better)
Translates to: GGAGDGSGARAA*QQCTAHVHGLV
Trigger: AACGAGGCCATGAACGTGAGCTGTGCACTGCTGTCAAGCGGCACGGGCCCCAGACCCATCTCCTGCACCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR TCA 72 bp GCACCTGGATGCACAGGGTCCACCCCTGGTCCAGGCTaGAGCTGCTGCTGTTCTCTAGCACGCAGGTGGCCA +
Preference number: 3 (lower is better)
Translates to: APGCTGSTPGPG*SCCCSLARRWP
Trigger: TGGCCACCTGCGTGCTAGAGAACAGCAGCAGCTTCAGCCTGGACCAGGGGTGGACCCTGTGCATCCAGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR GCA 72 bp GGGGCACCTGGTAGTGCCACCCAGAGGGGCAGCCGGTaGTCCTGGTGGTGTGGCAGCAACAGTTACAAACTC +
Preference number: 3 (lower is better)
Translates to: GAPGSATQRGSR*SWWCGSNSYKL
Trigger: GAGTTTGTAACTGTTGCTGCCACACCACCAGGAGCACCGGCTGCCCCTCTGGGTGGCACTACCAGGTGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR GCA 72 bp ACTGTGTGCCTGCTCAGGGGCAGGCAAACACCCTCTTaGTCGGGCAGGACGTCGGAGGGGCACTCATCCAGA +
Preference number: 3 (lower is better)
Translates to: TVCLLRGRQTPS*SGRTSEGHSSR
Trigger: TCTGGATGAGTGCCCCTCCGACGTCCTGCCCGAGCAAGAGGGTGTTTGCCTGCCCCTGAGCAGGCACACAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR GCA 72 bp AGTGTCTCGTGGTTGGCGTGGATCTGGCGGAGGTACTaGACACGGAGATCAGGAGCGCTGGAGCCCTGGGTG +
Preference number: 3 (lower is better)
Translates to: SVSWLAWIWRRY*TRRSGALEPWV
Trigger: CACCCAGGGCTCCAGCGCTCCTGATCTCCGTGTGCAGTACCTCCGCCAGATCCACGCCAACCACGAGACACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR CCA 72 bp GGTGAACGTTGGCGCCATCAGGGGCCACTCCCTGGATaGAAGATAGTGCTCGGGCCCTCACGACGTCCACAG +
Preference number: 3 (lower is better)
Translates to: GERWRHQGPLPG*KIVLGPSRRPQ
Trigger: CTGTGGACGTCGTGAGGGCCCGAGCACTATCTTCCATCCAGGGAGTGGCCCCTGATGGCGCCAACGTTCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443656.6
ENST00000545865.1
3UTR CCA 72 bp TCTGGCGGAGGTACTGCACACGGAGATCAGGAGCGCTaGAGCCCTGGGTGGCCTGCTCTGTCACCATCGTCT +
Preference number: 3 (lower is better)
Translates to: SGGGTAHGDQER*SPGWPALSPSS
Trigger: AGACGATGGTGACAGAGCAGGCCACCCAGGGCTCCAGCGCTCCTGATCTCCGTGTGCAGTACCTCCGCCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR CCA 72 bp ACCTCCCGCAGCAGTGTCTCGTGGTTGGCGTGGATCTaGCGGAGGTACTGCACACGGAGATCAGGAGCGCTG +
Preference number: 3 (lower is better)
Translates to: TSRSSVSWLAWI*RRYCTRRSGAL
Trigger: CAGCGCTCCTGATCTCCGTGTGCAGTACCTCCGCCAGATCCACGCCAACCACGAGACACTGCTGCGGGAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR-3UTR CAA 90 bp GGGTCGTTTGTCACAGCAGAGAAGCACCTCACGGCTCCTACCCGCACTCATCGCCGAGACCACGGGCACTaGCAGGAGCTCCCTGCATGC +
Preference number: 3 (lower is better)
Translates to: GSFVTAEKHLTAPTRTHRRDHGH*QELPAC
Trigger: GCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCG...GCGATGAGTGCGGGTAGGAGCCGTGAGGTGCTTCTCTGCTGTGACAAACGACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR-3UTR CAA 90 bp GGACAGACAGGGTCGTTTGTCACAGCAGAGAAGCACCTCACGGCTCCTACCCGCTGGGGCCCGTGCCGCTaGACAGCAGTGCACAGCTCA +
Preference number: 3 (lower is better)
Translates to: GQTGSFVTAEKHLTAPTRWGPCR*TAVHSS
Trigger: TGAGCTGTGCACTGCTGTCAAGCGGCACGGGCCCCA...GCGGGTAGGAGCCGTGAGGTGCTTCTCTGCTGTGACAAACGACCCTGTCTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR-3UTR CAA 90 bp CTGCTGCGGTGGTGGGAAGGCTGCCCAGCAGTGAGGAAGGCGAGTGCAGGGGCTCAATCAGAATCTGCTTaGTGCTCCACGGCCTCCAAG +
Preference number: 3 (lower is better)
Translates to: LLRWWEGCPAVRKASAGAQSESA*CSTASK
Trigger: CTTGGAGGCCGTGGAGCACAAAGCAGATTCTGATTG...AGCCCCTGCACTCGCCTTCCTCACTGCTGGGCAGCCTTCCCACCACCGCAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR-3UTR CAA 90 bp GGCAGGTGTGAACAGTGTGACAAGGGTACCGTGGGGCACCTGGTAGTGCCACCCCAGAGCCCGCCTCGGTaGCTCCCAATCAGAATCTGC +
Preference number: 3 (lower is better)
Translates to: GRCEQCDKGTVGHLVVPPQSPPR*LPIRIC
Trigger: GCAGATTCTGATTGGGAGCAACCGAGGCGGGCTCTG...GGGTGGCACTACCAGGTGCCCCACGGTACCCTTGTCACACTGTTCACACCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR-3UTR CAA 90 bp CACCACACAGAGGTCAGAAGGGGTGCTGTGGTACACGCGGCCACCCCCGCCACAGACAGACAGGGTCGTTaGTCACAGCAGAGAAGCACC +
Preference number: 3 (lower is better)
Translates to: HHTEVRRGAVVHAATPATDRQGR*SQQRST
Trigger: GGTGCTTCTCTGCTGTGACAAACGACCCTGTCTGTC...TGTGGCGGGGGTGGCCGCGTGTACCACAGCACCCCTTCTGACCTCTGTGTGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR TCA 72 bp CACAGGTCAGTCATGGCCACCTCTCGGACGATGAGGTaGACGTTGGCGCCATCAGGGGCCACTCCCTGGATG +
Preference number: 3 (lower is better)
Translates to: HRSVMATSRTMR*TLAPSGATPWM
Trigger: CATCCAGGGAGTGGCCCCTGATGGCGCCAACGTTCACCTCATCGTCCGAGAGGTGGCCATGACTGACCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443656.6
ENST00000545865.1
3UTR GCA 72 bp GAAGCTGGACCGGCCAGGTTCAGAGCCCGCCTCGGTTaGTCCCAATCAGAATCTGCTTTGTGCTCCACGGCC +
Preference number: 3 (lower is better)
Translates to: EAGPARFRARLG*SQSESALCSTA
Trigger: GGCCGTGGAGCACAAAGCAGATTCTGATTGGGAGCAACCGAGGCGGGCTCTGAACCTGGCCGGTCCAGCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR GCA 72 bp GGAAGCGCAGACACTGCAGCATGTCCACTGTGTGCCTaGTCAGGGGCAGGCAAACACCCTCTTGCTCGGGCA +
Preference number: 3 (lower is better)
Translates to: GSADTAACPLCA*SGAGKHPLARA
Trigger: TGCCCGAGCAAGAGGGTGTTTGCCTGCCCCTGAGCAGGCACACAGTGGACATGCTGCAGTGTCTGCGCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR GCA 72 bp CCAGGGAAGCGCAGACACTGCAGCATGTCCACTGTGTaGCTGCTCAGGGGCAGGCAAACACCCTCTTGCTCG +
Preference number: 3 (lower is better)
Translates to: PGKRRHCSMSTV*LLRGRQTPSCS
Trigger: CGAGCAAGAGGGTGTTTGCCTGCCCCTGAGCAGGCACACAGTGGACATGCTGCAGTGTCTGCGCTTCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR GCA 72 bp GTCACCATCGTCTGCATGCGCCCGACAACGGCATGGTaGGCCCTGCAAATGTCGGCCAGAGAGGAGCTTTCC +
Preference number: 3 (lower is better)
Translates to: VTIVCMRPTTAW*ALQMSAREELS
Trigger: GGAAAGCTCCTCTCTGGCCGACATTTGCAGGGCGCACCATGCCGTTGTCGGGCGCATGCAGACGATGGTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR-3UTR CAA 90 bp CAGCGGGAGCGGCGCGAGCACCCTCCCCAGATGAAAACACCAGCACCAGGAGGTATGCTGTTTTGTGCTTaGGTCTCAGGGAGCACCCTC +
Preference number: 3 (lower is better)
Translates to: QRERREHPPQMKTPAPGGMLFCA*VSGSTL
Trigger: GAGGGTGCTCCCTGAGACCAAAGCACAAAACAGCAT...ACCTCCTGGTGCTGGTGTTTTCATCTGGGGAGGGTGCTCGCGCCGCTCCCGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR TCA 72 bp GAGCTGGCCATCAGGGAGACCACAGAGGACCACAGGTaGCTGCAGGAGGGTGGCATCAGCTCCAAAGAGGAG +
Preference number: 3 (lower is better)
Translates to: ELAIRETTEDHR*LQEGGISSKEE
Trigger: CTCCTCTTTGGAGCTGATGCCACCCTCCTGCAGTCACCTGTGGTCCTCTGTGGTCTCCCTGATGGCCAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR GCA 72 bp ACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTaGTTTGGTCTCAGGGAGCACCCTCCTACCTCGGGG +
Preference number: 3 (lower is better)
Translates to: TGTCRSSLHAVL*FGLREHPPTSG
Trigger: CCCCGAGGTAGGAGGGTGCTCCCTGAGACCAAAGCACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR GCA 72 bp AGCGCCACCCTGAGTGGCCCTGAAAATAGTGCACAGTaGTGGGTACTGCCCCGGCTGGAGGCACCTAGTTGT +
Preference number: 3 (lower is better)
Translates to: SATLSGPENSAQ*WVLPRLEAPSC
Trigger: ACAACTAGGTGCCTCCAGCCGGGGCAGTACCCAGCACTGTGCACTATTTTCAGGGCCACTCAGGGTGGCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR CCA 72 bp GCCTCCAAGCACTTTCATGAGCGTTCTGCTCCTACGTaGCCAGGTCCTACCTTCCCTGACGGCTCTGGCCAG +
Preference number: 3 (lower is better)
Translates to: ASKHFHERSAPT*PGPTFPDGSGQ
Trigger: CTGGCCAGAGCCGTCAGGGAAGGTAGGACCTGGCCACGTAGGAGCAGAACGCTCATGAAAGTGCTTGGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR CCA 72 bp TCTGTCACCATCGTCTGCATGCGCCCGACAACGGCATaGTGCGCCCTGCAAATGTCGGCCAGAGAGGAGCTT +
Preference number: 3 (lower is better)
Translates to: SVTIVCMRPTTA*CALQMSAREEL
Trigger: AAGCTCCTCTCTGGCCGACATTTGCAGGGCGCACCATGCCGTTGTCGGGCGCATGCAGACGATGGTGACAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR GCA 72 bp TGTGGCACGAGACCACGGGCACTTGCAGGAGCTCCCTaGATGCTGTTTTGTGCTTTGGTCTCAGGGAGCACC +
Preference number: 3 (lower is better)
Translates to: CGTRPRALAGAP*MLFCALVSGST
Trigger: GGTGCTCCCTGAGACCAAAGCACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTGCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR GCA 72 bp TCGTCTGCATGCGCCCGACAACGGCATGGTGCGCCCTaGAAATGTCGGCCAGAGAGGAGCTTTCCACTTGAA +
Preference number: 3 (lower is better)
Translates to: SSACARQRHGAP*KCRPERSFPLE
Trigger: TTCAAGTGGAAAGCTCCTCTCTGGCCGACATTTGCAGGGCGCACCATGCCGTTGTCGGGCGCATGCAGACGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR CCA 72 bp CACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGCTTTaGTCTCAGGGAGCACCCTCCTACCTCGGGGTCCCA +
Preference number: 3 (lower is better)
Translates to: HLQELPACCFVL*SQGAPSYLGVP
Trigger: TGGGACCCCGAGGTAGGAGGGTGCTCCCTGAGACCAAAGCACAAAACAGCATGCAGGGAGCTCCTGCAAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR CCA 72 bp CTGAAAATAGTGCACAGTGCTGGGTACTGCCCCGGCTaGAGGCACCTAGTTGTTGAGCATTCCGGCCACAGG +
Preference number: 3 (lower is better)
Translates to: LKIVHSAGYCPG*RHLVVEHSGHR
Trigger: CCTGTGGCCGGAATGCTCAACAACTAGGTGCCTCCAGCCGGGGCAGTACCCAGCACTGTGCACTATTTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR-3UTR CAA 90 bp TGGTGTGGCACGAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTCAATCAGAATCTGCTTaGTGCTCCACGGCCTCCAAG +
Preference number: 3 (lower is better)
Translates to: WCGTRPRALAGAPCMLFCQSESA*CSTASK
Trigger: CTTGGAGGCCGTGGAGCACAAAGCAGATTCTGATTG...ACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTGCCACACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR-3UTR CAA 90 bp AGACACTGCAGCATGTCCACTGTGTGCCTGCTCAGGGGCAGGCAAACACCCTCTATGCTGTTTTGTGCTTaGGTCTCAGGGAGCACCCTC +
Preference number: 3 (lower is better)
Translates to: RHCSMSTVCLLRGRQTPSMLFCA*VSGSTL
Trigger: GAGGGTGCTCCCTGAGACCAAAGCACAAAACAGCAT...AGAGGGTGTTTGCCTGCCCCTGAGCAGGCACACAGTGGACATGCTGCAGTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR TCA 72 bp TTGACAGCAGTGCACAGCTCACGTTCATGGCCTCGTTaGGGCTTGTCAGTGCCTTGTTCCGCTGGTCAACCG +
Preference number: 3 (lower is better)
Translates to: LTAVHSSRSWPR*GLSVPCSAGQP
Trigger: CGGTTGACCAGCGGAACAAGGCACTGACAAGCCTCAACGAGGCCATGAACGTGAGCTGTGCACTGCTGTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR GCA 72 bp GCCCGCCTCGGTTGCTCCCAATCAGAATCTGCTTTGTaGTCCACGGCCTCCAAGCACTTTCATGAGCGTTCT +
Preference number: 3 (lower is better)
Translates to: ARLGCSQSESAL*STASKHFHERS
Trigger: AGAACGCTCATGAAAGTGCTTGGAGGCCGTGGAGCACAAAGCAGATTCTGATTGGGAGCAACCGAGGCGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR-3UTR CAA 90 bp CACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGCTTTGGTCTCAGGGAGCACCCCAATCAGAATCTGCTTaGTGCTCCACGGCCTCCAAG +
Preference number: 3 (lower is better)
Translates to: HLQELPACCFVLWSQGAPQSESA*CSTASK
Trigger: CTTGGAGGCCGTGGAGCACAAAGCAGATTCTGATTG...GGGTGCTCCCTGAGACCAAAGCACAAAACAGCATGCAGGGAGCTCCTGCAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR-3UTR CAA 90 bp AAAATAGTGCACAGTGCTGGGTACTGCCCCGGCTGGAGGCACCTAGTTGTTGAGGACAGACAGGGTCGTTaGTCACAGCAGAGAAGCACC +
Preference number: 3 (lower is better)
Translates to: KIVHSAGYCPGWRHLVVEDRQGR*SQQRST
Trigger: GGTGCTTCTCTGCTGTGACAAACGACCCTGTCTGTC...CTCAACAACTAGGTGCCTCCAGCCGGGGCAGTACCCAGCACTGTGCACTATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR TCA 72 bp ATCTGCTTTGTGCTCCACGGCCTCCAAGCACTTTCATaGGCGTTCTGCTCCTACGTGGCCAGGTCCTACCTT +
Preference number: 3 (lower is better)
Translates to: ICFVLHGLQALS*AFCSYVARSYL
Trigger: AAGGTAGGACCTGGCCACGTAGGAGCAGAACGCTCATGAAAGTGCTTGGAGGCCGTGGAGCACAAAGCAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR CCA 72 bp ATGGCCTCGTTGAGGCTTGTCAGTGCCTTGTTCCGCTaGTCAACCGCCTTCTTTAGAAAAGACACTCTCTCA +
Preference number: 3 (lower is better)
Translates to: MASLRLVSALFR*STAFFRKDTLS
Trigger: TGAGAGAGTGTCTTTTCTAAAGAAGGCGGTTGACCAGCGGAACAAGGCACTGACAAGCCTCAACGAGGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR TCA 90 bp CACGGCTCCTACCCGCACTCATCGCGGACAGTGCCTGCAGCGGGAGCGGCGCGAGGCCGTAGCCCAGGCTaGGGGAGGAGGCTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: HGSYPHSSRTVPAAGAARGRSPG*GRRLGA
Trigger: AGCCCCCAGCCTCCTCCCTCAGCCTGGGCTACGGCC...TCGCGCCGCTCCCGCTGCAGGCACTGTCCGCGATGAGTGCGGGTAGGAGCCGTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp GGGCAGGCCTCCCGGGCCTTCTTCGGGCTGCTCAGGGCCCAGCGGGGTGCTTCCGCCCTCACCTGCTCCTaGCCGGGTGGTCCAGCGACA +
Preference number: 4 (lower is better)
Translates to: GQASRAFFGLLRAQRGASALTCS*PGGPAT
Trigger: TGTCGCTGGACCACCCGGGCAGGAGCAGGTGAGGGC...GGAAGCACCCCGCTGGGCCCTGAGCAGCCCGAAGAAGGCCCGGGAGGCCTGCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR CCA 90 bp CACGGCTCCTACCCGCACTCATCGCGGACAGTGCCTGCAGCGGGAGCGGCGCGAGGAGGCGGGTCCTGCTaGCTGGCTGCCAGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: HGSYPHSSRTVPAAGAARGGGSC*LAARLP
Trigger: CGGGAGCCTGGCAGCCAGCCAGCAGGACCCGCCTCC...TCGCGCCGCTCCCGCTGCAGGCACTGTCCGCGATGAGTGCGGGTAGGAGCCGTG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR TCA 90 bp CGGTGGCACAGGAGCTGGCCTCATCCTCCGTGCAGAGCCGGTCGCGCAGGGTCTGGCCGTAGCCCAGGCTaGGGGAGGAGGCTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: RWHRSWPHPPCRAGRAGSGRSPG*GRRLGA
Trigger: AGCCCCCAGCCTCCTCCCTCAGCCTGGGCTACGGCC...AGACCCTGCGCGACCGGCTCTGCACGGAGGATGAGGCCAGCTCCTGTGCCACCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR CCA 90 bp GGTACCGTGGGGCACCTGGTAGTGCCACCCAGAGGGGCAGCCGGTGCTCCTGGTTGGCTGGGCACAGCATaGGGGGCAGGCCTCCCGGGC +
Preference number: 4 (lower is better)
Translates to: GTVGHLVVPPRGAAGAPGWLGTA*GAGLPG
Trigger: GCCCGGGAGGCCTGCCCCCCATGCTGTGCCCAGCCA...ACCAGGAGCACCGGCTGCCCCTCTGGGTGGCACTACCAGGTGCCCCACGGTACC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR CCA 90 bp GCACCTCACGGCTCCTACCCGCACTCATCGCGGACAGTGCCTGCAGCGGGAGCGGGAGGCGGGTCCTGCTaGCTGGCTGCCAGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: APHGSYPHSSRTVPAAGAGGGSC*LAARLP
Trigger: CGGGAGCCTGGCAGCCAGCCAGCAGGACCCGCCTCC...CGCTCCCGCTGCAGGCACTGTCCGCGATGAGTGCGGGTAGGAGCCGTGAGGTGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR TCA 90 bp GGCCTCCCGGGCCTTCTTCGGGCTGCTCAGGGCCCAGCGGGGTGCTTCCCCGAGCGCCCACCACCTCCCTaGGACTGTAGAACAGCGTGC +
Preference number: 4 (lower is better)
Translates to: GLPGLLRAAQGPAGCFPERPPPP*DCRTAC
Trigger: GCACGCTGTTCTACAGTCTCAGGGAGGTGGTGGGCG...CTCGGGGAAGCACCCCGCTGGGCCCTGAGCAGCCCGAAGAAGGCCCGGGAGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR GCA 90 bp CACGGCTCCTACCCGCACTCATCGCGGACAGTGCCTGCAGCGGGAGCGGCGCGAAGTGAGGAAGGCGAGTaGAGGGGCTGCGGCCGCGGT +
Preference number: 4 (lower is better)
Translates to: HGSYPHSSRTVPAAGAARSEEGE*RGCGRG
Trigger: ACCGCGGCCGCAGCCCCTGCACTCGCCTTCCTCACT...TCGCGCCGCTCCCGCTGCAGGCACTGTCCGCGATGAGTGCGGGTAGGAGCCGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR TCA 90 bp CTGTTTCTCTGGCCCTCCGGGTCCAGAATGCCCTGCACTGCCTCCTGGCCTCAGGGGCGTCCTCCAGCGTaGAGCCCCCGGAGCCCCCGA +
Preference number: 4 (lower is better)
Translates to: LFLWPSGSRMPCTASWPQGRPPA*SPRSPR
Trigger: TCGGGGGCTCCGGGGGCTTCACGCTGGAGGACGCCC...CTGAGGCCAGGAGGCAGTGCAGGGCATTCTGGACCCGGAGGGCCAGAGAAACAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR TCA 90 bp GTCACGGGCAGGTCGAGCCCGCCGTTCTCACCAGGGCCCAGGGGTAGCGTCACCAGCATCCGGCCGTGGTaGCCAAAGGCCACCAGGCAG +
Preference number: 4 (lower is better)
Translates to: VTGRSSPPFSPGPRGSVTSIRPW*PKATRQ
Trigger: CTGCCTGGTGGCCTTTGGTCACCACGGCCGGATGCT...GGTGACGCTACCCCTGGGCCCTGGTGAGAACGGCGGGCTCGACCTGCCCGTGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR TCA 90 bp CTGCGGTGGTGGGAAGGCTGCCCAGCAGTGAGGAAGGCGAGTGCAGGGGCTGCGGGGGCCCGTGCCGCTTaGCAGCAGTGCACAGCTCAC +
Preference number: 4 (lower is better)
Translates to: LRWWEGCPAVRKASAGAAGARAA*QQCTAH
Trigger: GTGAGCTGTGCACTGCTGTCAAGCGGCACGGGCCCC...CGCAGCCCCTGCACTCGCCTTCCTCACTGCTGGGCAGCCTTCCCACCACCGCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp CTGCGGTGGTGGGAAGGCTGCCCAGCAGTGAGGAAGGCGAGTGCAGGGGCTGCGTGGCCTCATCCTCCGTaGAGAGCCGGTCGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: LRWWEGCPAVRKASAGAAWPHPP*RAGRAG
Trigger: CCCTGCGCGACCGGCTCTGCACGGAGGATGAGGCCA...CGCAGCCCCTGCACTCGCCTTCCTCACTGCTGGGCAGCCTTCCCACCACCGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp TGCCCAGCAGTGAGGAAGGCGAGTGCAGGGGCTGCGGCCGCGGTCAGAGAAGGAGGCGAGTGCAGGGGCTaGGGCCGCGGTCAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: CPAVRKASAGAAAAVREGGECRG*GRGQRR
Trigger: CCTTCTCTGACCGCGGCCGCAGCCCCTGCACTCGCC...TCCTTCTCTGACCGCGGCCGCAGCCCCTGCACTCGCCTTCCTCACTGCTGGGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp GCACCTCACGGCTCCTACCCGCACTCATCGCGGACAGTGCCTGCAGCGGGAGCGCAGAGGGGCAGCCGGTaGTCCTGGTGGTGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: APHGSYPHSSRTVPAAGAQRGSR*SWWCGS
Trigger: GCTGCCACACCACCAGGAGCACCGGCTGCCCCTCTG...CGCTCCCGCTGCAGGCACTGTCCGCGATGAGTGCGGGTAGGAGCCGTGAGGTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp GCACCTCACGGCTCCTACCCGCACTCATCGCGGACAGTGCCTGCAGCGGGAGCGACTCATCGCGGACAGTaGCTGCAGCGGGAGCGGCGC +
Preference number: 4 (lower is better)
Translates to: APHGSYPHSSRTVPAAGATHRGQ*LQRERR
Trigger: GCGCCGCTCCCGCTGCAGGCACTGTCCGCGATGAGT...CGCTCCCGCTGCAGGCACTGTCCGCGATGAGTGCGGGTAGGAGCCGTGAGGTGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp GTGAGGAAGGCGAGTGCAGGGGCTGCGGCCGCGGTCAGAGAAGGAGAGACACCACCACAGGGTCTCGGGTaGGGCCGAGTGGGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: VRKASAGAAAAVREGETPPQGLG*GRVGRG
Trigger: CCCCCTCCCCACTCGGCCCCACCCGAGACCCTGTGG...TGGTGTCTCTCCTTCTCTGACCGCGGCCGCAGCCCCTGCACTCGCCTTCCTCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp GGTACCGTGGGGCACCTGGTAGTGCCACCCAGAGGGGCAGCCGGTGCTCCTGGTGCGGGTCCTGCTGGCTaGCTGCCAGGCTCCCGACAA +
Preference number: 4 (lower is better)
Translates to: GTVGHLVVPPRGAAGAPGAGPAG*LPGSRQ
Trigger: TTGTCGGGAGCCTGGCAGCCAGCCAGCAGGACCCGC...ACCAGGAGCACCGGCTGCCCCTCTGGGTGGCACTACCAGGTGCCCCACGGTACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp GGCCACCTCTCGGACGATGAGGTGAACGTTGGCGCCATCAGGGGCCACTCCCTGGGAGGCGGGTCCTGCTaGCTGGCTGCCAGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: GHLSDDEVNVGAIRGHSLGGGSC*LAARLP
Trigger: CGGGAGCCTGGCAGCCAGCCAGCAGGACCCGCCTCC...CAGGGAGTGGCCCCTGATGGCGCCAACGTTCACCTCATCGTCCGAGAGGTGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443656.6
ENST00000545865.1
CDS-3UTR CCA 90 bp GGTACCGTGGGGCACCTGGTAGTGCCACCCAGAGGGGCAGCCGGTGCTCCTGGTCAGGGGCTGCTGCGGTaGTGGGAAGGCTGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: GTVGHLVVPPRGAAGAPGQGLLR*WEGCPA
Trigger: TGCTGGGCAGCCTTCCCACCACCGCAGCAGCCCCTG...ACCAGGAGCACCGGCTGCCCCTCTGGGTGGCACTACCAGGTGCCCCACGGTACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp CCGAGCACCGGGGCCGAGCTGGTCCACGGGGATGGTGTAGGTGATGGCGGAGCATGGGTCTGGGGCCCGTaGCGCTTGACAGCAGTGCAC +
Preference number: 4 (lower is better)
Translates to: PSTGAELVHGDGVGDGGAWVWGP*RLTAVH
Trigger: GTGCACTGCTGTCAAGCGGCACGGGCCCCAGACCCA...TGCTCCGCCATCACCTACACCATCCCCGTGGACCAGCTCGGCCCCGGTGCTCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR GCA 90 bp CTGCTGCGGTGGTGGGAAGGCTGCCCAGCAGTGAGGAAGGCGAGTGCAGGGGCTTGGCCTCATCCTCCGTaGAGAGCCGGTCGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: LLRWWEGCPAVRKASAGAWPHPP*RAGRAG
Trigger: CCCTGCGCGACCGGCTCTGCACGGAGGATGAGGCCA...AGCCCCTGCACTCGCCTTCCTCACTGCTGGGCAGCCTTCCCACCACCGCAGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp CTGCGGTGGTGGGAAGGCTGCCCAGCAGTGAGGAAGGCGAGTGCAGGGGCTGCGCGGTGGTGGGAAGGCTaGCCAGCAGTGAGGAAGGCG +
Preference number: 4 (lower is better)
Translates to: LRWWEGCPAVRKASAGAARWWEG*PAVRKA
Trigger: CGCCTTCCTCACTGCTGGGCAGCCTTCCCACCACCG...CGCAGCCCCTGCACTCGCCTTCCTCACTGCTGGGCAGCCTTCCCACCACCGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp GTGAGGAAGGCGAGTGCAGGGGCTGCGGCCGCGGTCAGAGAAGGAGAGACACCAATCGCGGACAGTGCCTaGAGCGGGAGCGGCGCGAGC +
Preference number: 4 (lower is better)
Translates to: VRKASAGAAAAVREGETPIADSA*SGSGAS
Trigger: GCTCGCGCCGCTCCCGCTGCAGGCACTGTCCGCGAT...TGGTGTCTCTCCTTCTCTGACCGCGGCCGCAGCCCCTGCACTCGCCTTCCTCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp GGTACCGTGGGGCACCTGGTAGTGCCACCCAGAGGGGCAGCCGGTGCTCCTGGTGCAGGGGCCGGGTGGTaGATTACCCCACCCTTGGCT +
Preference number: 4 (lower is better)
Translates to: GTVGHLVVPPRGAAGAPGAGAGW*ITPPLA
Trigger: AGCCAAGGGTGGGGTAATGCACCACCCGGCCCCTGC...ACCAGGAGCACCGGCTGCCCCTCTGGGTGGCACTACCAGGTGCCCCACGGTACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000425898.2
CDS-3UTR CCA 90 bp GCTGCTCAGGGCCCAGCGGGGTGCTTCCCCGAGACAGATCCACCACACAGAGGTACCGATCTGGCCTCCTaGCCGGGGGTCCTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: AAQGPAGCFPETDPPHRGTDLAS*PGVLPR
Trigger: CCTGGGGAGGACCCCCGGCCAGGAGGCCAGATCGGT...ACCTCTGTGTGGTGGATCTGTCTCGGGGAAGCACCCCGCTGGGCCCTGAGCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR CCA 90 bp TGCCCAGCAGTGAGGAAGGCGAGTGCAGGGGCTGCGGCCGCGGTCAGAGAAGGATCCACCTCACCGATCTaGCCTCCTGGCCGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: CPAVRKASAGAAAAVREGSTSPI*PPGRGS
Trigger: GGACCCCCGGCCAGGAGGCCAGATCGGTGAGGTGGA...TCCTTCTCTGACCGCGGCCGCAGCCCCTGCACTCGCCTTCCTCACTGCTGGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR CCA 90 bp GAAGCACCTCACGGCTCCTACCCGCACTCATCGCGGACAGTGCCTGCAGCGGGAGGCTGCAGGCTTTCCTaGGACCCCGGCTGGGGGCGT +
Preference number: 4 (lower is better)
Translates to: EAPHGSYPHSSRTVPAAGGCRLS*DPGWGR
Trigger: ACGCCCCCAGCCGGGGTCCCAGGAAAGCCTGCAGCC...TCCCGCTGCAGGCACTGTCCGCGATGAGTGCGGGTAGGAGCCGTGAGGTGCTTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR CCA 90 bp ACAGGGATCACGGGGGAAGGCTGGTCACCGTCCTCGCTGTCCCTGTCATCCTGGTGGCTGGGCACAGCATaGGGGGCAGGCCTCCCGGGC +
Preference number: 4 (lower is better)
Translates to: TGITGEGWSPSSLSLSSWWLGTA*GAGLPG
Trigger: GCCCGGGAGGCCTGCCCCCCATGCTGTGCCCAGCCA...CCAGGATGACAGGGACAGCGAGGACGGTGACCAGCCTTCCCCCGTGATCCCTGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR CCA 90 bp CTGCTGCGGTGGTGGGAAGGCTGCCCAGCAGTGAGGAAGGCGAGTGCAGGGGCTTGGTGGTGCAGGAGATaGGTCTGGGGCCCGTGCCGC +
Preference number: 4 (lower is better)
Translates to: LLRWWEGCPAVRKASAGAWWCRR*VWGPCR
Trigger: GCGGCACGGGCCCCAGACCCATCTCCTGCACCACCA...AGCCCCTGCACTCGCCTTCCTCACTGCTGGGCAGCCTTCCCACCACCGCAGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp GAGGAAGGCGAGTGCAGGGGCTGCGGCCGCGGTCAGAGAAGGAGAGACACCAGCTGGTGGTGCAGGAGATaGGTCTGGGGCCCGTGCCGC +
Preference number: 4 (lower is better)
Translates to: EEGECRGCGRGQRRRDTSWWCRR*VWGPCR
Trigger: GCGGCACGGGCCCCAGACCCATCTCCTGCACCACCA...GCTGGTGTCTCTCCTTCTCTGACCGCGGCCGCAGCCCCTGCACTCGCCTTCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp CACGGCTCCTACCCGCACTCATCGCGGACAGTGCCTGCAGCGGGAGCGGCGCGAGGGCCACTCCCTGGATaGAAGATAGTGCTCGGGCCC +
Preference number: 4 (lower is better)
Translates to: HGSYPHSSRTVPAAGAARGPLPG*KIVLGP
Trigger: GGGCCCGAGCACTATCTTCCATCCAGGGAGTGGCCC...TCGCGCCGCTCCCGCTGCAGGCACTGTCCGCGATGAGTGCGGGTAGGAGCCGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp GCACCTCACGGCTCCTACCCGCACTCATCGCGGACAGTGCCTGCAGCGGGAGCGCCACAGGCCACCCGCTaGCCCTTCCTTGGTGTGGCA +
Preference number: 4 (lower is better)
Translates to: APHGSYPHSSRTVPAAGAPQATR*PFLGVA
Trigger: TGCCACACCAAGGAAGGGCCAGCGGGTGGCCTGTGG...CGCTCCCGCTGCAGGCACTGTCCGCGATGAGTGCGGGTAGGAGCCGTGAGGTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR TCA 90 bp CACGGCTCCTACCCGCACTCATCGCGGACAGTGCCTGCAGCGGGAGCGGCGCGACACTGTCCAGCAAGGTaGACGCGCACAGCGCAGCAT +
Preference number: 4 (lower is better)
Translates to: HGSYPHSSRTVPAAGAARHCPAR*TRTAQH
Trigger: ATGCTGCGCTGTGCGCGTTCACCTTGCTGGACAGTG...TCGCGCCGCTCCCGCTGCAGGCACTGTCCGCGATGAGTGCGGGTAGGAGCCGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR TCA 90 bp CGGTGGCACAGGAGCTGGCCTCATCCTCCGTGCAGAGCCGGTCGCGCAGGGTCTGGGCTGACCTGGAGGTaGCCAGGGCCTTCAGGATCA +
Preference number: 4 (lower is better)
Translates to: RWHRSWPHPPCRAGRAGSGLTWR*PGPSGS
Trigger: TGATCCTGAAGGCCCTGGTCACCTCCAGGTCAGCCC...AGACCCTGCGCGACCGGCTCTGCACGGAGGATGAGGCCAGCTCCTGTGCCACCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR TCA 90 bp GCATGCGCCCGACAACGGCATGGTGCGCCCTGCAAATGTCGGCCAGAGAGGAGCGGGGCCCGTGCCGCTTaGCAGCAGTGCACAGCTCAC +
Preference number: 4 (lower is better)
Translates to: ACARQRHGAPCKCRPERSGARAA*QQCTAH
Trigger: GTGAGCTGTGCACTGCTGTCAAGCGGCACGGGCCCC...GCTCCTCTCTGGCCGACATTTGCAGGGCGCACCATGCCGTTGTCGGGCGCATGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR TCA 90 bp CTGCGGTGGTGGGAAGGCTGCCCAGCAGTGAGGAAGGCGAGTGCAGGGGCTGCGCGCCCACCACCTCCCTaGGACTGTAGAACAGCGTGC +
Preference number: 4 (lower is better)
Translates to: LRWWEGCPAVRKASAGAARPPPP*DCRTAC
Trigger: GCACGCTGTTCTACAGTCTCAGGGAGGTGGTGGGCG...CGCAGCCCCTGCACTCGCCTTCCTCACTGCTGGGCAGCCTTCCCACCACCGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp TGCCCAGCAGTGAGGAAGGCGAGTGCAGGGGCTGCGGCCGCGGTCAGAGAAGGACATCGGGCAGGGCCCTaGACCAGGGTGACCAGCACA +
Preference number: 4 (lower is better)
Translates to: CPAVRKASAGAAAAVREGHRAGP*TRVTST
Trigger: TGTGCTGGTCACCCTGGTGCAGGGCCCTGCCCGATG...TCCTTCTCTGACCGCGGCCGCAGCCCCTGCACTCGCCTTCCTCACTGCTGGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR GCA 90 bp CAGCAGAGGACGCGAAGCTGGACCGGCCAGGTTCAGAGCCCGCCTCGGTTGCTCTGGGTCTGGGGCCCGTaGCGCTTGACAGCAGTGCAC +
Preference number: 4 (lower is better)
Translates to: QQRTRSWTGQVQSPPRLLWVWGP*RLTAVH
Trigger: GTGCACTGCTGTCAAGCGGCACGGGCCCCAGACCCA...GAGCAACCGAGGCGGGCTCTGAACCTGGCCGGTCCAGCTTCGCGTCCTCTGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp CTGCGGTGGTGGGAAGGCTGCCCAGCAGTGAGGAAGGCGAGTGCAGGGGCTGCGCGGCATGGTGCGCCCTaGAAATGTCGGCCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: LRWWEGCPAVRKASAGAARHGAP*KCRPER
Trigger: CCTCTCTGGCCGACATTTGCAGGGCGCACCATGCCG...CGCAGCCCCTGCACTCGCCTTCCTCACTGCTGGGCAGCCTTCCCACCACCGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp CTGCGGTGGTGGGAAGGCTGCCCAGCAGTGAGGAAGGCGAGTGCAGGGGCTGCGCCGACAACGGCATGGTaGGCCCTGCAAATGTCGGCC +
Preference number: 4 (lower is better)
Translates to: LRWWEGCPAVRKASAGAAPTTAW*ALQMSA
Trigger: GGCCGACATTTGCAGGGCGCACCATGCCGTTGTCGG...CGCAGCCCCTGCACTCGCCTTCCTCACTGCTGGGCAGCCTTCCCACCACCGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp GTGAGGAAGGCGAGTGCAGGGGCTGCGGCCGCGGTCAGAGAAGGAGAGACACCACGGTCGCGCAGGGTCTaGACCTCCCGCAGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: VRKASAGAAAAVREGETPRSRRV*TSRSSV
Trigger: GACACTGCTGCGGGAGGTGCAGACCCTGCGCGACCG...TGGTGTCTCTCCTTCTCTGACCGCGGCCGCAGCCCCTGCACTCGCCTTCCTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp CTGCTGCGGTGGTGGGAAGGCTGCCCAGCAGTGAGGAAGGCGAGTGCAGGGGCTCTGGGGTGGCGCAGCTaGCGGTACACCTGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: LLRWWEGCPAVRKASAGALGWRS*RYTCSS
Trigger: GCTGCTACAGGTGTACCGGCAGCTGCGCCACCCCAG...AGCCCCTGCACTCGCCTTCCTCACTGCTGGGCAGCCTTCCCACCACCGCAGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp CTGTTTCTCTGGCCCTCCGGGTCCAGAATGCCCTGCACTGCCTCCTGGCCTCAGGGCGAGTGCAGGGGCTaGGGCCGCGGTCAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: LFLWPSGSRMPCTASWPQGECRG*GRGQRR
Trigger: CCTTCTCTGACCGCGGCCGCAGCCCCTGCACTCGCC...CTGAGGCCAGGAGGCAGTGCAGGGCATTCTGGACCCGGAGGGCCAGAGAAACAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp CCCGACAACGGCATGGTGCGCCCTGCAAATGTCGGCCAGAGAGGAGCTTTCCACTGGGGTGAGCGCAGCTaGCTCCCTCCCCGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: PDNGMVRPANVGQRGAFHWGERS*LPPRVP
Trigger: GGGCACCCGGGGAGGGAGGCAGCTGCGCTCACCCCA...GTGGAAAGCTCCTCTCTGGCCGACATTTGCAGGGCGCACCATGCCGTTGTCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545865.1
CDS-3UTR CCA 90 bp CAGCAGAGGACGCGAAGCTGGACCGGCCAGGTTCAGAGCCCGCCTCGGTTGCTCGCAGAGCACAGGGCCTaGGAGGCAGTACTCCCGCAG +
Preference number: 4 (lower is better)
Translates to: QQRTRSWTGQVQSPPRLLAEHRA*EAVLPQ
Trigger: CTGCGGGAGTACTGCCTCCCAGGCCCTGTGCTCTGC...GAGCAACCGAGGCGGGCTCTGAACCTGGCCGGTCCAGCTTCGCGTCCTCTGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR CCA 90 bp TCACGGCTCCTACCCGCACTCATCGCGGACAGTGCCTGCAGCGGGAGCGGCGCGTGCAGATGTTCAGGCTaGCTGGGCACAGCATGGGGG +
Preference number: 4 (lower is better)
Translates to: SRLLPALIADSACSGSGACRCSG*LGTAWG
Trigger: CCCCCATGCTGTGCCCAGCCAGCCTGAACATCTGCA...CGCGCCGCTCCCGCTGCAGGCACTGTCCGCGATGAGTGCGGGTAGGAGCCGTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR CCA 90 bp CCGAGCACCGGGGCCGAGCTGGTCCACGGGGATGGTGTAGGTGATGGCGGAGCAGGGCCACTCCCTGGATaGAAGATAGTGCTCGGGCCC +
Preference number: 4 (lower is better)
Translates to: PSTGAELVHGDGVGDGGAGPLPG*KIVLGP
Trigger: GGGCCCGAGCACTATCTTCCATCCAGGGAGTGGCCC...TGCTCCGCCATCACCTACACCATCCCCGTGGACCAGCTCGGCCCCGGTGCTCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR CCA 90 bp CAGCGGGAGCGGCGCGAGCACCCTCCCCAGATGAAAACACCAGCACCAGGAGGTGGAGCGCTGGAGCCCTaGGTGGCCTGCTCTGTCACC +
Preference number: 4 (lower is better)
Translates to: QRERREHPPQMKTPAPGGGALEP*VACSVT
Trigger: GGTGACAGAGCAGGCCACCCAGGGCTCCAGCGCTCC...ACCTCCTGGTGCTGGTGTTTTCATCTGGGGAGGGTGCTCGCGCCGCTCCCGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp GCAGAGGACGCGAAGCTGGACCGGCCAGGTTCAGAGCCCGCCTCGGTTGCTCCCCGCAGCAGTGTCTCGTaGTTGGCGTGGATCTGGCGG +
Preference number: 4 (lower is better)
Translates to: AEDAKLDRPGSEPASVAPRSSVS*LAWIWR
Trigger: CCGCCAGATCCACGCCAACCACGAGACACTGCTGCG...GGGAGCAACCGAGGCGGGCTCTGAACCTGGCCGGTCCAGCTTCGCGTCCTCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp CTGCGGTGGTGGGAAGGCTGCCCAGCAGTGAGGAAGGCGAGTGCAGGGGCTGCGCAGAGGACGCGAAGCTaGACCGGCCAGGTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: LRWWEGCPAVRKASAGAAQRTRS*TGQVQS
Trigger: GCTCTGAACCTGGCCGGTCCAGCTTCGCGTCCTCTG...CGCAGCCCCTGCACTCGCCTTCCTCACTGCTGGGCAGCCTTCCCACCACCGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp CTGCGGTGGTGGGAAGGCTGCCCAGCAGTGAGGAAGGCGAGTGCAGGGGCTGCGGGCAGCCGGTGCTCCTaGTGGTGTGGCAGCAACAGT +
Preference number: 4 (lower is better)
Translates to: LRWWEGCPAVRKASAGAAGSRCS*WCGSNS
Trigger: ACTGTTGCTGCCACACCACCAGGAGCACCGGCTGCC...CGCAGCCCCTGCACTCGCCTTCCTCACTGCTGGGCAGCCTTCCCACCACCGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp CAGCAGAGGACGCGAAGCTGGACCGGCCAGGTTCAGAGCCCGCCTCGGTTGCTCCCGCTGGCCCTTCCTTaGTGTGGCACGAGACCACGG +
Preference number: 4 (lower is better)
Translates to: QQRTRSWTGQVQSPPRLLPLALP*CGTRPR
Trigger: CCGTGGTCTCGTGCCACACCAAGGAAGGGCCAGCGG...GAGCAACCGAGGCGGGCTCTGAACCTGGCCGGTCCAGCTTCGCGTCCTCTGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp CAGCAGAGGACGCGAAGCTGGACCGGCCAGGTTCAGAGCCCGCCTCGGTTGCTCCCACAGGCCACCCGCTaGCCCTTCCTTGGTGTGGCA +
Preference number: 4 (lower is better)
Translates to: QQRTRSWTGQVQSPPRLLPQATR*PFLGVA
Trigger: TGCCACACCAAGGAAGGGCCAGCGGGTGGCCTGTGG...GAGCAACCGAGGCGGGCTCTGAACCTGGCCGGTCCAGCTTCGCGTCCTCTGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp GCAGAGGACGCGAAGCTGGACCGGCCAGGTTCAGAGCCCGCCTCGGTTGCTCCCGAAAGGGTGGGCTGCTaGGGGGCAGTCCCGGCTTAT +
Preference number: 4 (lower is better)
Translates to: AEDAKLDRPGSEPASVAPERVGC*GAVPAY
Trigger: ATAAGCCGGGACTGCCCCCCAGCAGCCCACCCTTTC...GGGAGCAACCGAGGCGGGCTCTGAACCTGGCCGGTCCAGCTTCGCGTCCTCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425898.2
CDS-3UTR TCA 90 bp GAAGCACCTCACGGCTCCTACCCGCACTCATCGCGGACAGTGCCTGCAGCGGGACGGGGATGGTGTAGGTaGTGGCGGAGCAGGCCGAGT +
Preference number: 4 (lower is better)
Translates to: EAPHGSYPHSSRTVPAAGRGWCR*WRSRPS
Trigger: ACTCGGCCTGCTCCGCCATCACCTACACCATCCCCG...TCCCGCTGCAGGCACTGTCCGCGATGAGTGCGGGTAGGAGCCGTGAGGTGCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR TCA 90 bp GAGGAAGGCGAGTGCAGGGGCTGCGGCCGCGGTCAGAGAAGGAGAGACACCAGCGCTCCGCCGACACCTTaGTGGAAGCCACAGATGGGG +
Preference number: 4 (lower is better)
Translates to: EEGECRGCGRGQRRRDTSAPPTP*WKPQMG
Trigger: CCCCATCTGTGGCTTCCATCAAGGTGTCGGCGGAGC...GCTGGTGTCTCTCCTTCTCTGACCGCGGCCGCAGCCCCTGCACTCGCCTTCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR TCA 90 bp CAGCGGGAGCGGCGCGAGCACCCTCCCCAGATGAAAACACCAGCACCAGGAGGTAGGTCCTACCTTCCCTaGCGGCTCTGGCCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: QRERREHPPQMKTPAPGGRSYLP*RLWPGQ
Trigger: CTGGCCTGGCCAGAGCCGTCAGGGAAGGTAGGACCT...ACCTCCTGGTGCTGGTGTTTTCATCTGGGGAGGGTGCTCGCGCCGCTCCCGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp CAGCGGGAGCGGCGCGAGCACCCTCCCCAGATGAAAACACCAGCACCAGGAGGTCATCGGGCAGGGCCCTaGACCAGGGTGACCAGCACA +
Preference number: 4 (lower is better)
Translates to: QRERREHPPQMKTPAPGGHRAGP*TRVTST
Trigger: TGTGCTGGTCACCCTGGTGCAGGGCCCTGCCCGATG...ACCTCCTGGTGCTGGTGTTTTCATCTGGGGAGGGTGCTCGCGCCGCTCCCGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR GCA 90 bp GTCACGGGCAGGTCGAGCCCGCCGTTCTCACCAGGGCCCAGGGGTAGCGTCACCGACTGTAGAACAGCGTaGAGGACACGGTCACGGGCA +
Preference number: 4 (lower is better)
Translates to: VTGRSSPPFSPGPRGSVTDCRTA*RTRSRA
Trigger: TGCCCGTGACCGTGTCCTGCACGCTGTTCTACAGTC...GGTGACGCTACCCCTGGGCCCTGGTGAGAACGGCGGGCTCGACCTGCCCGTGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR GCA 90 bp CACGGCTCCTACCCGCACTCATCGCGGACAGTGCCTGCAGCGGGAGCGGCGCGAGGGAAGCGCAGACACTaGAGCATGTCCACTGTGTGC +
Preference number: 4 (lower is better)
Translates to: HGSYPHSSRTVPAAGAARGKRRH*SMSTVC
Trigger: GCACACAGTGGACATGCTGCAGTGTCTGCGCTTCCC...TCGCGCCGCTCCCGCTGCAGGCACTGTCCGCGATGAGTGCGGGTAGGAGCCGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp CACCACACAGAGGTCAGAAGGGGTGCTGTGGTACACGCGGCCACCCCCGCCACACTGGGGTGGCGCAGCTaGCGGTACACCTGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: HHTEVRRGAVVHAATPATLGWRS*RYTCSS
Trigger: GCTGCTACAGGTGTACCGGCAGCTGCGCCACCCCAG...TGTGGCGGGGGTGGCCGCGTGTACCACAGCACCCCTTCTGACCTCTGTGTGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR GCA 90 bp TGGCGCCATCAGGGGCCACTCCCTGGATGGAAGATAGTGCTCGGGCCCTCACGACCTGGCCTCAGGGGCTaGTGCGGTGGTGGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: WRHQGPLPGWKIVLGPSRPGLRG*CGGGKA
Trigger: AGCCTTCCCACCACCGCAGCAGCCCCTGAGGCCAGG...TCGTGAGGGCCCGAGCACTATCTTCCATCCAGGGAGTGGCCCCTGATGGCGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR GCA 90 bp GGCAGGTGTGAACAGTGTGACAAGGGTACCGTGGGGCACCTGGTAGTGCCACCCATCGCGGACAGTGCCTaGAGCGGGAGCGGCGCGAGC +
Preference number: 4 (lower is better)
Translates to: GRCEQCDKGTVGHLVVPPIADSA*SGSGAS
Trigger: GCTCGCGCCGCTCCCGCTGCAGGCACTGTCCGCGAT...GGGTGGCACTACCAGGTGCCCCACGGTACCCTTGTCACACTGTTCACACCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp CACCTCTCGGACGATGAGGTGAACGTTGGCGCCATCAGGGGCCACTCCCTGGATATCGCGGACAGTGCCTaGAGCGGGAGCGGCGCGAGC +
Preference number: 4 (lower is better)
Translates to: HLSDDEVNVGAIRGHSLDIADSA*SGSGAS
Trigger: GCTCGCGCCGCTCCCGCTGCAGGCACTGTCCGCGAT...ATCCAGGGAGTGGCCCCTGATGGCGCCAACGTTCACCTCATCGTCCGAGAGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR GCA 90 bp CCTGTTTCTCTGGCCCTCCGGGTCCAGAATGCCCTGCACTGCCTCCTGGCCTCAACTCATCGCGGACAGTaGCTGCAGCGGGAGCGGCGC +
Preference number: 4 (lower is better)
Translates to: PVSLALRVQNALHCLLASTHRGQ*LQRERR
Trigger: GCGCCGCTCCCGCTGCAGGCACTGTCCGCGATGAGT...TGAGGCCAGGAGGCAGTGCAGGGCATTCTGGACCCGGAGGGCCAGAGAAACAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp GTGGCCCTGAAAATAGTGCACAGTGCTGGGTACTGCCCCGGCTGGAGGCACCTAGGGCCCGCCCTCACCTaGTCCTGCCCGGGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: VALKIVHSAGYCPGWRHLGPALT*SCPGGP
Trigger: TGGACCACCCGGGCAGGAGCAGGTGAGGGCGGGCCC...TAGGTGCCTCCAGCCGGGGCAGTACCCAGCACTGTGCACTATTTTCAGGGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR CCA 90 bp CCCGACAACGGCATGGTGCGCCCTGCAAATGTCGGCCAGAGAGGAGCTTTCCACGGCTGCAGGCTTTCCTaGGACCCCGGCTGGGGGCGT +
Preference number: 4 (lower is better)
Translates to: PDNGMVRPANVGQRGAFHGCRLS*DPGWGR
Trigger: ACGCCCCCAGCCGGGGTCCCAGGAAAGCCTGCAGCC...GTGGAAAGCTCCTCTCTGGCCGACATTTGCAGGGCGCACCATGCCGTTGTCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR CCA 90 bp CAGAGTGGGCAGCCGGGCAGGTGTGAACAGTGTGACAAGGGTACCGTGGGGCACGCGGGTCCTGCTGGCTaGCTGCCAGGCTCCCGACAA +
Preference number: 4 (lower is better)
Translates to: QSGQPGRCEQCDKGTVGHAGPAG*LPGSRQ
Trigger: TTGTCGGGAGCCTGGCAGCCAGCCAGCAGGACCCGC...GTGCCCCACGGTACCCTTGTCACACTGTTCACACCTGCCCGGCTGCCCACTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp GATAGTGCTCGGGCCCTCACGACGTCCACAGCAGCATTCTCAGCAAGGAGCCACGGAGGCGGGTCCTGCTaGCTGGCTGCCAGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: DSARALTTSTAAFSARSHGGGSC*LAARLP
Trigger: CGGGAGCCTGGCAGCCAGCCAGCAGGACCCGCCTCC...GTGGCTCCTTGCTGAGAATGCTGCTGTGGACGTCGTGAGGGCCCGAGCACTATC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443656.6
ENST00000545865.1
CDS-3UTR CCA 90 bp GAGGAAGGCGAGTGCAGGGGCTGCGGCCGCGGTCAGAGAAGGAGAGACACCAGCAGGGGCACGCCTGAGTaGCCGTCCTTCAAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: EEGECRGCGRGQRRRDTSRGTPE*PSFKAA
Trigger: AGCTGCCTTGAAGGACGGCCACTCAGGCGTGCCCCT...GCTGGTGTCTCTCCTTCTCTGACCGCGGCCGCAGCCCCTGCACTCGCCTTCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp CGCCCGACAACGGCATGGTGCGCCCTGCAAATGTCGGCCAGAGAGGAGCTTTCCGGAGCGCTGGAGCCCTaGGTGGCCTGCTCTGTCACC +
Preference number: 4 (lower is better)
Translates to: RPTTAWCALQMSAREELSGALEP*VACSVT
Trigger: GGTGACAGAGCAGGCCACCCAGGGCTCCAGCGCTCC...GGAAAGCTCCTCTCTGGCCGACATTTGCAGGGCGCACCATGCCGTTGTCGGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR CCA 90 bp GGTACCGTGGGGCACCTGGTAGTGCCACCCAGAGGGGCAGCCGGTGCTCCTGGTGTCTCGTGGTTGGCGTaGATCTGGCGGAGGTACTGC +
Preference number: 4 (lower is better)
Translates to: GTVGHLVVPPRGAAGAPGVSWLA*IWRRYC
Trigger: GCAGTACCTCCGCCAGATCCACGCCAACCACGAGAC...ACCAGGAGCACCGGCTGCCCCTCTGGGTGGCACTACCAGGTGCCCCACGGTACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp CTCCTACCTCGGGGTCCCAGAGTGGGCAGCCGGGCAGGTGTGAACAGTGTGACACAGGGGCTGCTGCGGTaGTGGGAAGGCTGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: LLPRGPRVGSRAGVNSVTQGLLR*WEGCPA
Trigger: TGCTGGGCAGCCTTCCCACCACCGCAGCAGCCCCTG...TGTCACACTGTTCACACCTGCCCGGCTGCCCACTCTGGGACCCCGAGGTAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp CAGCAGAGGACGCGAAGCTGGACCGGCCAGGTTCAGAGCCCGCCTCGGTTGCTCGGCAGCCGGTGCTCCTaGTGGTGTGGCAGCAACAGT +
Preference number: 4 (lower is better)
Translates to: QQRTRSWTGQVQSPPRLLGSRCS*WCGSNS
Trigger: ACTGTTGCTGCCACACCACCAGGAGCACCGGCTGCC...GAGCAACCGAGGCGGGCTCTGAACCTGGCCGGTCCAGCTTCGCGTCCTCTGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp GTGAGGAAGGCGAGTGCAGGGGCTGCGGCCGCGGTCAGAGAAGGAGAGACACCACCACAGGCCACCCGCTaGCCCTTCCTTGGTGTGGCA +
Preference number: 4 (lower is better)
Translates to: VRKASAGAAAAVREGETPPQATR*PFLGVA
Trigger: TGCCACACCAAGGAAGGGCCAGCGGGTGGCCTGTGG...TGGTGTCTCTCCTTCTCTGACCGCGGCCGCAGCCCCTGCACTCGCCTTCCTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR TCA 90 bp GCAGAGGACGCGAAGCTGGACCGGCCAGGTTCAGAGCCCGCCTCGGTTGCTCCCACCCCTGGTCCAGGCTaGAGCTGCTGCTGTTCTCTA +
Preference number: 4 (lower is better)
Translates to: AEDAKLDRPGSEPASVAPTPGPG*SCCCSL
Trigger: TAGAGAACAGCAGCAGCTTCAGCCTGGACCAGGGGT...GGGAGCAACCGAGGCGGGCTCTGAACCTGGCCGGTCCAGCTTCGCGTCCTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR TCA 90 bp GAGGACGCGAAGCTGGACCGGCCAGGTTCAGAGCCCGCCTCGGTTGCTCCCAATCCTTCAAGGCAGCTCTaGGCAGCTCCGCCGACACCT +
Preference number: 4 (lower is better)
Translates to: EDAKLDRPGSEPASVAPNPSRQL*AAPPTP
Trigger: AGGTGTCGGCGGAGCTGCTCAGAGCTGCCTTGAAGG...ATTGGGAGCAACCGAGGCGGGCTCTGAACCTGGCCGGTCCAGCTTCGCGTCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR TCA 90 bp GCGCCATCAGGGGCCACTCCCTGGATGGAAGATAGTGCTCGGGCCCTCACGACGCCTTCAAGGCAGCTCTaGGCAGCTCCGCCGACACCT +
Preference number: 4 (lower is better)
Translates to: APSGATPWMEDSARALTTPSRQL*AAPPTP
Trigger: AGGTGTCGGCGGAGCTGCTCAGAGCTGCCTTGAAGG...CGTCGTGAGGGCCCGAGCACTATCTTCCATCCAGGGAGTGGCCCCTGATGGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443656.6
ENST00000545865.1
CDS-3UTR TCA 90 bp CTGCTGCGGTGGTGGGAAGGCTGCCCAGCAGTGAGGAAGGCGAGTGCAGGGGCTTCTCGGACGATGAGGTaGACGTTGGCGCCATCAGGG +
Preference number: 4 (lower is better)
Translates to: LLRWWEGCPAVRKASAGASRTMR*TLAPSG
Trigger: CCCTGATGGCGCCAACGTTCACCTCATCGTCCGAGA...AGCCCCTGCACTCGCCTTCCTCACTGCTGGGCAGCCTTCCCACCACCGCAGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR TCA 90 bp TGGCGGAGGTACTGCACACGGAGATCAGGAGCGCTGGAGCCCTGGGTGGCCTGCTCTCGGACGATGAGGTaGACGTTGGCGCCATCAGGG +
Preference number: 4 (lower is better)
Translates to: WRRYCTRRSGALEPWVACSRTMR*TLAPSG
Trigger: CCCTGATGGCGCCAACGTTCACCTCATCGTCCGAGA...GCAGGCCACCCAGGGCTCCAGCGCTCCTGATCTCCGTGTGCAGTACCTCCGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR GCA 90 bp CAGCAGAGGACGCGAAGCTGGACCGGCCAGGTTCAGAGCCCGCCTCGGTTGCTCTTGGTGCCACCTTCATaGGTCCTGGGAGACGCGGAC +
Preference number: 4 (lower is better)
Translates to: QQRTRSWTGQVQSPPRLLLVPPS*VLGDAD
Trigger: GTCCGCGTCTCCCAGGACGCATGAAGGTGGCACCAA...GAGCAACCGAGGCGGGCTCTGAACCTGGCCGGTCCAGCTTCGCGTCCTCTGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR GCA 90 bp CTGCTGCGGTGGTGGGAAGGCTGCCCAGCAGTGAGGAAGGCGAGTGCAGGGGCTTTGGTGCCACCTTCATaGGTCCTGGGAGACGCGGAC +
Preference number: 4 (lower is better)
Translates to: LLRWWEGCPAVRKASAGALVPPS*VLGDAD
Trigger: GTCCGCGTCTCCCAGGACGCATGAAGGTGGCACCAA...AGCCCCTGCACTCGCCTTCCTCACTGCTGGGCAGCCTTCCCACCACCGCAGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR GCA 90 bp CCCAGAGTGGGCAGCCGGGCAGGTGTGAACAGTGTGACAAGGGTACCGTGGGGCGGGCCAGGAGCTTGGTaGCACCTTCATGCGTCCTGG +
Preference number: 4 (lower is better)
Translates to: PRVGSRAGVNSVTRVPWGGPGAW*HLHASW
Trigger: CCAGGACGCATGAAGGTGGCACCAAGCTCCTGGCCC...GCCCCACGGTACCCTTGTCACACTGTTCACACCTGCCCGGCTGCCCACTCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR GCA 90 bp TGCCCAGCAGTGAGGAAGGCGAGTGCAGGGGCTGCGGCCGCGGTCAGAGAAGGAAGTCCAGGTCCAGGCTaGAGGTCATCAGGCGGCCTT +
Preference number: 4 (lower is better)
Translates to: CPAVRKASAGAAAAVREGSPGPG*RSSGGL
Trigger: AAGGCCGCCTGATGACCTGCAGCCTGGACCTGGACT...TCCTTCTCTGACCGCGGCCGCAGCCCCTGCACTCGCCTTCCTCACTGCTGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR GCA 90 bp GAGGAAGGCGAGTGCAGGGGCTGCGGCCGCGGTCAGAGAAGGAGAGACACCAGCGTCCTGCTGGCTGGCTaGCAGGCTCCCGACAAGTTT +
Preference number: 4 (lower is better)
Translates to: EEGECRGCGRGQRRRDTSVLLAG*QAPDKF
Trigger: AAACTTGTCGGGAGCCTGGCAGCCAGCCAGCAGGAC...GCTGGTGTCTCTCCTTCTCTGACCGCGGCCGCAGCCCCTGCACTCGCCTTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp CAGCGGGAGCGGCGCGAGCACCCTCCCCAGATGAAAACACCAGCACCAGGAGGTCCGACAACGGCATGGTaGGCCCTGCAAATGTCGGCC +
Preference number: 4 (lower is better)
Translates to: QRERREHPPQMKTPAPGGPTTAW*ALQMSA
Trigger: GGCCGACATTTGCAGGGCGCACCATGCCGTTGTCGG...ACCTCCTGGTGCTGGTGTTTTCATCTGGGGAGGGTGCTCGCGCCGCTCCCGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp GAAGCACCTCACGGCTCCTACCCGCACTCATCGCGGACAGTGCCTGCAGCGGGACCGACAACGGCATGGTaGGCCCTGCAAATGTCGGCC +
Preference number: 4 (lower is better)
Translates to: EAPHGSYPHSSRTVPAAGPTTAW*ALQMSA
Trigger: GGCCGACATTTGCAGGGCGCACCATGCCGTTGTCGG...TCCCGCTGCAGGCACTGTCCGCGATGAGTGCGGGTAGGAGCCGTGAGGTGCTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp CCCGACAACGGCATGGTGCGCCCTGCAAATGTCGGCCAGAGAGGAGCTTTCCACCGGTCGCGCAGGGTCTaGACCTCCCGCAGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: PDNGMVRPANVGQRGAFHRSRRV*TSRSSV
Trigger: GACACTGCTGCGGGAGGTGCAGACCCTGCGCGACCG...GTGGAAAGCTCCTCTCTGGCCGACATTTGCAGGGCGCACCATGCCGTTGTCGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR GCA 90 bp TCCCCAGATGAAAACACCAGCACCAGGAGGTGGGCCGTAGCCCAGGCTGAGGGAAGTGAGGAAGGCGAGTaGAGGGGCTGCGGCCGCGGT +
Preference number: 4 (lower is better)
Translates to: SPDENTSTRRWAVAQAEGSEEGE*RGCGRG
Trigger: ACCGCGGCCGCAGCCCCTGCACTCGCCTTCCTCACT...TCCCTCAGCCTGGGCTACGGCCCACCTCCTGGTGCTGGTGTTTTCATCTGGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp CCCAGAGTGGGCAGCCGGGCAGGTGTGAACAGTGTGACAAGGGTACCGTGGGGCGGGAGCAGGGGAGGCTaGGCGCACTCAGTGTGTTCT +
Preference number: 4 (lower is better)
Translates to: PRVGSRAGVNSVTRVPWGGSRGG*AHSVCS
Trigger: AGAACACACTGAGTGCGCGCAGCCTCCCCTGCTCCC...GCCCCACGGTACCCTTGTCACACTGTTCACACCTGCCCGGCTGCCCACTCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425898.2
CDS-3UTR GCA 90 bp CATCAGGGGCCACTCCCTGGATGGAAGATAGTGCTCGGGCCCTCACGACGTCCAGCCTCCCTCCCCGGGTaGCCGCACTGTGAAGCTCAC +
Preference number: 4 (lower is better)
Translates to: HQGPLPGWKIVLGPSRRPASLPG*PHCEAH
Trigger: GTGAGCTTCACAGTGCGGGCACCCGGGGAGGGAGGC...TGGACGTCGTGAGGGCCCGAGCACTATCTTCCATCCAGGGAGTGGCCCCTGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545865.1
CDS-3UTR CCA 90 bp TGGCGGAGGTACTGCACACGGAGATCAGGAGCGCTGGAGCCCTGGGTGGCCTGCTGCAGATGTTCAGGCTaGCTGGGCACAGCATGGGGG +
Preference number: 4 (lower is better)
Translates to: WRRYCTRRSGALEPWVACCRCSG*LGTAWG
Trigger: CCCCCATGCTGTGCCCAGCCAGCCTGAACATCTGCA...GCAGGCCACCCAGGGCTCCAGCGCTCCTGATCTCCGTGTGCAGTACCTCCGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR CCA 90 bp GCGCCATCAGGGGCCACTCCCTGGATGGAAGATAGTGCTCGGGCCCTCACGACGTCATCAGGCGGCCTTTaGCGGACAGGGCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: APSGATPWMEDSARALTTSSGGL*RTGPGA
Trigger: AGCTCCTGGCCCTGTCCGCCAAAGGCCGCCTGATGA...CGTCGTGAGGGCCCGAGCACTATCTTCCATCCAGGGAGTGGCCCCTGATGGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR CCA 90 bp CAGCAGAGGACGCGAAGCTGGACCGGCCAGGTTCAGAGCCCGCCTCGGTTGCTCGACCTGCACTCTCTGTaGTCATCCTGGCTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: QQRTRSWTGQVQSPPRLLDLHSL*SSWLGQ
Trigger: CTGGCCCAGCCAGGATGACCACAGAGAGTGCAGGTC...GAGCAACCGAGGCGGGCTCTGAACCTGGCCGGTCCAGCTTCGCGTCCTCTGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR CCA 90 bp CAGCGGGAGCGGCGCGAGCACCCTCCCCAGATGAAAACACCAGCACCAGGAGGTTGCAGGAGATGGGTCTaGGGCCCGTGCCGCTTGACA +
Preference number: 4 (lower is better)
Translates to: QRERREHPPQMKTPAPGGCRRWV*GPCRLT
Trigger: TGTCAAGCGGCACGGGCCCCAGACCCATCTCCTGCA...ACCTCCTGGTGCTGGTGTTTTCATCTGGGGAGGGTGCTCGCGCCGCTCCCGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp CACCACACAGAGGTCAGAAGGGGTGCTGTGGTACACGCGGCCACCCCCGCCACATGCAGGAGATGGGTCTaGGGCCCGTGCCGCTTGACA +
Preference number: 4 (lower is better)
Translates to: HHTEVRRGAVVHAATPATCRRWV*GPCRLT
Trigger: TGTCAAGCGGCACGGGCCCCAGACCCATCTCCTGCA...TGTGGCGGGGGTGGCCGCGTGTACCACAGCACCCCTTCTGACCTCTGTGTGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR CCA 90 bp TGGTGTGGCACGAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGGGGGCCCGTGTGTGTaGCGGGGCCAGGCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: WCGTRPRALAGAPCMLFCGGPCV*RGQARE
Trigger: TTCCCTGGCCTGGCCCCGCCACACACACGGGCCCCC...ACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTGCCACACCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp CCCGACAACGGCATGGTGCGCCCTGCAAATGTCGGCCAGAGAGGAGCTTTCCACGCGGGTCCTGCTGGCTaGCTGCCAGGCTCCCGACAA +
Preference number: 4 (lower is better)
Translates to: PDNGMVRPANVGQRGAFHAGPAG*LPGSRQ
Trigger: TTGTCGGGAGCCTGGCAGCCAGCCAGCAGGACCCGC...GTGGAAAGCTCCTCTCTGGCCGACATTTGCAGGGCGCACCATGCCGTTGTCGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443656.6
ENST00000545865.1
CDS-3UTR CCA 90 bp GCATGCGCCCGACAACGGCATGGTGCGCCCTGCAAATGTCGGCCAGAGAGGAGCGATGGAAGCCACAGATaGGGGCAGGTACTCGGCCCG +
Preference number: 4 (lower is better)
Translates to: ACARQRHGAPCKCRPERSDGSHR*GQVLGP
Trigger: CGGGCCGAGTACCTGCCCCCATCTGTGGCTTCCATC...GCTCCTCTCTGGCCGACATTTGCAGGGCGCACCATGCCGTTGTCGGGCGCATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443656.6
ENST00000545865.1
CDS-3UTR CCA 90 bp GGTACCGTGGGGCACCTGGTAGTGCCACCCAGAGGGGCAGCCGGTGCTCCTGGTTCAGGGGCCACTCCCTaGATGGAAGATAGTGCTCGG +
Preference number: 4 (lower is better)
Translates to: GTVGHLVVPPRGAAGAPGSGATP*MEDSAR
Trigger: CCGAGCACTATCTTCCATCCAGGGAGTGGCCCCTGA...ACCAGGAGCACCGGCTGCCCCTCTGGGTGGCACTACCAGGTGCCCCACGGTACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp GTGAGGAAGGCGAGTGCAGGGGCTGCGGCCGCGGTCAGAGAAGGAGAGACACCACGCCCGACAACGGCATaGTGCGCCCTGCAAATGTCG +
Preference number: 4 (lower is better)
Translates to: VRKASAGAAAAVREGETPRPTTA*CALQMS
Trigger: CGACATTTGCAGGGCGCACCATGCCGTTGTCGGGCG...TGGTGTCTCTCCTTCTCTGACCGCGGCCGCAGCCCCTGCACTCGCCTTCCTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp TGCCCAGCAGTGAGGAAGGCGAGTGCAGGGGCTGCGGCCGCGGTCAGAGAAGGATGGTTGGCGTGGATCTaGCGGAGGTACTGCACACGG +
Preference number: 4 (lower is better)
Translates to: CPAVRKASAGAAAAVREGWLAWI*RRYCTR
Trigger: CCGTGTGCAGTACCTCCGCCAGATCCACGCCAACCA...TCCTTCTCTGACCGCGGCCGCAGCCCCTGCACTCGCCTTCCTCACTGCTGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp CAGCGGGAGCGGCGCGAGCACCCTCCCCAGATGAAAACACCAGCACCAGGAGGTACCTGTAGCAGCCTCTaGGCGGTGGCACAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: QRERREHPPQMKTPAPGGTCSSL*AVAQEL
Trigger: CAGCTCCTGTGCCACCGCCCAGAGGCTGCTACAGGT...ACCTCCTGGTGCTGGTGTTTTCATCTGGGGAGGGTGCTCGCGCCGCTCCCGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp CCCAGAGTGGGCAGCCGGGCAGGTGTGAACAGTGTGACAAGGGTACCGTGGGGCACCTGTAGCAGCCTCTaGGCGGTGGCACAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: PRVGSRAGVNSVTRVPWGTCSSL*AVAQEL
Trigger: CAGCTCCTGTGCCACCGCCCAGAGGCTGCTACAGGT...GCCCCACGGTACCCTTGTCACACTGTTCACACCTGCCCGGCTGCCCACTCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp GAGGACGCGAAGCTGGACCGGCCAGGTTCAGAGCCCGCCTCGGTTGCTCCCAATACCTGTAGCAGCCTCTaGGCGGTGGCACAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: EDAKLDRPGSEPASVAPNTCSSL*AVAQEL
Trigger: CAGCTCCTGTGCCACCGCCCAGAGGCTGCTACAGGT...ATTGGGAGCAACCGAGGCGGGCTCTGAACCTGGCCGGTCCAGCTTCGCGTCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp CAGCAGAGGACGCGAAGCTGGACCGGCCAGGTTCAGAGCCCGCCTCGGTTGCTCGGGTACTGCCCCGGCTaGAGGCACCTAGTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: QQRTRSWTGQVQSPPRLLGYCPG*RHLVVE
Trigger: CTCAACAACTAGGTGCCTCCAGCCGGGGCAGTACCC...GAGCAACCGAGGCGGGCTCTGAACCTGGCCGGTCCAGCTTCGCGTCCTCTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
3UTR CAA 72 bp CACTGTGTGCCTGCTCAGGGGCAGGCAAACACCCTCTaGCTCGGGCAGGACGTCGGAGGGGCACTCATCCAG +
Preference number: 4 (lower is better)
Translates to: HCVPAQGQANTL*LGQDVGGALIQ
Trigger: CTGGATGAGTGCCCCTCCGACGTCCTGCCCGAGCAAGAGGGTGTTTGCCTGCCCCTGAGCAGGCACACAGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR TCA 90 bp CCCAGAGTGGGCAGCCGGGCAGGTGTGAACAGTGTGACAAGGGTACCGTGGGGCGCACGCAGGTGGCCATaGGCACATCCTGTGTCTGCA +
Preference number: 4 (lower is better)
Translates to: PRVGSRAGVNSVTRVPWGARRWP*AHPVSA
Trigger: TGCAGACACAGGATGTGCTCATGGCCACCTGCGTGC...GCCCCACGGTACCCTTGTCACACTGTTCACACCTGCCCGGCTGCCCACTCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR TCA 90 bp CGCCCGACAACGGCATGGTGCGCCCTGCAAATGTCGGCCAGAGAGGAGCTTTCCGCTCCGCCGACACCTTaGTGGAAGCCACAGATGGGG +
Preference number: 4 (lower is better)
Translates to: RPTTAWCALQMSAREELSAPPTP*WKPQMG
Trigger: CCCCATCTGTGGCTTCCATCAAGGTGTCGGCGGAGC...GGAAAGCTCCTCTCTGGCCGACATTTGCAGGGCGCACCATGCCGTTGTCGGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443656.6
ENST00000545865.1
CDS-3UTR TCA 90 bp CAGAGTGGGCAGCCGGGCAGGTGTGAACAGTGTGACAAGGGTACCGTGGGGCACCCTTCAAGGCAGCTCTaGGCAGCTCCGCCGACACCT +
Preference number: 4 (lower is better)
Translates to: QSGQPGRCEQCDKGTVGHPSRQL*AAPPTP
Trigger: AGGTGTCGGCGGAGCTGCTCAGAGCTGCCTTGAAGG...GTGCCCCACGGTACCCTTGTCACACTGTTCACACCTGCCCGGCTGCCCACTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR TCA 90 bp GGCCACCTCTCGGACGATGAGGTGAACGTTGGCGCCATCAGGGGCCACTCCCTGTCTCGGACGATGAGGTaGACGTTGGCGCCATCAGGG +
Preference number: 4 (lower is better)
Translates to: GHLSDDEVNVGAIRGHSLSRTMR*TLAPSG
Trigger: CCCTGATGGCGCCAACGTTCACCTCATCGTCCGAGA...CAGGGAGTGGCCCCTGATGGCGCCAACGTTCACCTCATCGTCCGAGAGGTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443656.6
ENST00000545865.1
CDS-3UTR TCA 90 bp GAGGACGCGAAGCTGGACCGGCCAGGTTCAGAGCCCGCCTCGGTTGCTCCCAATCCACCTCTCGGACGATaGGGTGAACGTTGGCGCCAT +
Preference number: 4 (lower is better)
Translates to: EDAKLDRPGSEPASVAPNPPLGR*GERWRH
Trigger: ATGGCGCCAACGTTCACCTCATCGTCCGAGAGGTGG...ATTGGGAGCAACCGAGGCGGGCTCTGAACCTGGCCGGTCCAGCTTCGCGTCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR TCA 90 bp GAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGCTTTGGTCTCGGCCGTAGCCCAGGCTaGGGGAGGAGGCTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: ETTGTCRSSLHAVLCFGLGRSPG*GRRLGA
Trigger: AGCCCCCAGCCTCCTCCCTCAGCCTGGGCTACGGCC...GAGACCAAAGCACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR TCA 90 bp GGCACGAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGCTTTGCACAGGGACCCGGAGTaGCAGGCCCCTCGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: GTRPRALAGAPCMLFCALHRDPE*QAPRSR
Trigger: CCGAGAGCGAGGGGCCTGTCACTCCGGGTCCCTGTG...CAAAGCACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425898.2
CDS-3UTR TCA 90 bp GGTGTGGCACGAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGTGGGGCTGCTCGCTCTaGAGCAGTCCGGGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: GVARDHGHLQELPACCFVWGCSL*SSPGAA
Trigger: TGCTGCCCCCGGACTGCTTCAGAGCGAGCAGCCCCA...CACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTGCCACACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR GCA 90 bp CAGCAGAGGACGCGAAGCTGGACCGGCCAGGTTCAGAGCCCGCCTCGGTTGCTCGGCTGCTCAAACAGCTaGATCTTCCATCGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: QQRTRSWTGQVQSPPRLLGCSNS*IFHRAG
Trigger: CCCTGCCCGATGGAAGATGCAGCTGTTTGAGCAGCC...GAGCAACCGAGGCGGGCTCTGAACCTGGCCGGTCCAGCTTCGCGTCCTCTGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR GCA 90 bp GATAGTGCTCGGGCCCTCACGACGTCCACAGCAGCATTCTCAGCAAGGAGCCACCCCCCGAGGAGGTCGTaGGGGACCCTGGAGCCTGAT +
Preference number: 4 (lower is better)
Translates to: DSARALTTSTAAFSARSHPPRRS*GTLEPD
Trigger: ATCAGGCTCCAGGGTCCCGCACGACCTCCTCGGGGG...GTGGCTCCTTGCTGAGAATGCTGCTGTGGACGTCGTGAGGGCCCGAGCACTATC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR GCA 90 bp CCCAGAGTGGGCAGCCGGGCAGGTGTGAACAGTGTGACAAGGGTACCGTGGGGCAGCACATCCTGTGTCTaGAGGCGGCTCCAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: PRVGSRAGVNSVTRVPWGSTSCV*RRLQVV
Trigger: CACCACCTGGAGCCGCCTGCAGACACAGGATGTGCT...GCCCCACGGTACCCTTGTCACACTGTTCACACCTGCCCGGCTGCCCACTCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp GAGGAAGGCGAGTGCAGGGGCTGCGGCCGCGGTCAGAGAAGGAGAGACACCAGCGACTGTAGAACAGCGTaGAGGACACGGTCACGGGCA +
Preference number: 4 (lower is better)
Translates to: EEGECRGCGRGQRRRDTSDCRTA*RTRSRA
Trigger: TGCCCGTGACCGTGTCCTGCACGCTGTTCTACAGTC...GCTGGTGTCTCTCCTTCTCTGACCGCGGCCGCAGCCCCTGCACTCGCCTTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp GTGAGGAAGGCGAGTGCAGGGGCTGCGGCCGCGGTCAGAGAAGGAGAGACACCAAGGCAAACACCCTCTTaGTCGGGCAGGACGTCGGAG +
Preference number: 4 (lower is better)
Translates to: VRKASAGAAAAVREGETPRQTPS*SGRTSE
Trigger: CTCCGACGTCCTGCCCGAGCAAGAGGGTGTTTGCCT...TGGTGTCTCTCCTTCTCTGACCGCGGCCGCAGCCCCTGCACTCGCCTTCCTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp CAGCAGAGGACGCGAAGCTGGACCGGCCAGGTTCAGAGCCCGCCTCGGTTGCTCGGGAAGCGCAGACACTaGAGCATGTCCACTGTGTGC +
Preference number: 4 (lower is better)
Translates to: QQRTRSWTGQVQSPPRLLGKRRH*SMSTVC
Trigger: GCACACAGTGGACATGCTGCAGTGTCTGCGCTTCCC...GAGCAACCGAGGCGGGCTCTGAACCTGGCCGGTCCAGCTTCGCGTCCTCTGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp GAGGACGCGAAGCTGGACCGGCCAGGTTCAGAGCCCGCCTCGGTTGCTCCCAATGTCCTGCTGGCTGGCTaGCAGGCTCCCGACAAGTTT +
Preference number: 4 (lower is better)
Translates to: EDAKLDRPGSEPASVAPNVLLAG*QAPDKF
Trigger: AAACTTGTCGGGAGCCTGGCAGCCAGCCAGCAGGAC...ATTGGGAGCAACCGAGGCGGGCTCTGAACCTGGCCGGTCCAGCTTCGCGTCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp AGGTCGAGAGCACAGGAGCTGGTGAGCACCTGGATGCACAGGGTCCACCCCTGGGGCCTGGATGGGCCCTaGTGGGCACAGGTCAGTCAT +
Preference number: 4 (lower is better)
Translates to: RSRAQELVSTWMHRVHPWGLDGP*WAQVSH
Trigger: ATGACTGACCTGTGCCCAGCAGGGCCCATCCAGGCC...CCAGGGGTGGACCCTGTGCATCCAGGTGCTCACCAGCTCCTGTGCTCTCGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR GCA 90 bp CTGTTTCTCTGGCCCTCCGGGTCCAGAATGCCCTGCACTGCCTCCTGGCCTCAGCGGCATGGTGCGCCCTaGAAATGTCGGCCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: LFLWPSGSRMPCTASWPQRHGAP*KCRPER
Trigger: CCTCTCTGGCCGACATTTGCAGGGCGCACCATGCCG...CTGAGGCCAGGAGGCAGTGCAGGGCATTCTGGACCCGGAGGGCCAGAGAAACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp GCCTTTGGCGGACAGGGCCAGGAGCTTGGTGCCACCTTCATGCGTCCTGGGAGACGGCATGGTGCGCCCTaGAAATGTCGGCCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: AFGGQGQELGATFMRPGRRHGAP*KCRPER
Trigger: CCTCTCTGGCCGACATTTGCAGGGCGCACCATGCCG...TCTCCCAGGACGCATGAAGGTGGCACCAAGCTCCTGGCCCTGTCCGCCAAAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR GCA 90 bp TGGCGCCATCAGGGGCCACTCCCTGGATGGAAGATAGTGCTCGGGCCCTCACGACGGCATGGTGCGCCCTaGAAATGTCGGCCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: WRHQGPLPGWKIVLGPSRRHGAP*KCRPER
Trigger: CCTCTCTGGCCGACATTTGCAGGGCGCACCATGCCG...TCGTGAGGGCCCGAGCACTATCTTCCATCCAGGGAGTGGCCCCTGATGGCGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443656.6
ENST00000545865.1
CDS-3UTR GCA 90 bp CCTGTTTCTCTGGCCCTCCGGGTCCAGAATGCCCTGCACTGCCTCCTGGCCTCAGAGCCCTGGGTGGCCTaGTCTGTCACCATCGTCTGC +
Preference number: 4 (lower is better)
Translates to: PVSLALRVQNALHCLLASEPWVA*SVTIVC
Trigger: GCAGACGATGGTGACAGAGCAGGCCACCCAGGGCTC...TGAGGCCAGGAGGCAGTGCAGGGCATTCTGGACCCGGAGGGCCAGAGAAACAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp GGACAGACAGGGTCGTTTGTCACAGCAGAGAAGCACCTCACGGCTCCTACCCGCCGGTCGCGCAGGGTCTaGACCTCCCGCAGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: GQTGSFVTAEKHLTAPTRRSRRV*TSRSSV
Trigger: GACACTGCTGCGGGAGGTGCAGACCCTGCGCGACCG...GCGGGTAGGAGCCGTGAGGTGCTTCTCTGCTGTGACAAACGACCCTGTCTGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp CATCAGGGGCCACTCCCTGGATGGAAGATAGTGCTCGGGCCCTCACGACGTCCACGGTGGTGGGAAGGCTaGCCAGCAGTGAGGAAGGCG +
Preference number: 4 (lower is better)
Translates to: HQGPLPGWKIVLGPSRRPRWWEG*PAVRKA
Trigger: CGCCTTCCTCACTGCTGGGCAGCCTTCCCACCACCG...TGGACGTCGTGAGGGCCCGAGCACTATCTTCCATCCAGGGAGTGGCCCCTGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR GCA 90 bp CCTGTTTCTCTGGCCCTCCGGGTCCAGAATGCCCTGCACTGCCTCCTGGCCTCACAGAATGCCCTGCACTaGCTCCTGGCCTCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: PVSLALRVQNALHCLLASQNALH*LLASGA
Trigger: AGCCCCTGAGGCCAGGAGGCAGTGCAGGGCATTCTG...TGAGGCCAGGAGGCAGTGCAGGGCATTCTGGACCCGGAGGGCCAGAGAAACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp GGTACCGTGGGGCACCTGGTAGTGCCACCCAGAGGGGCAGCCGGTGCTCCTGGTGAAAATAGTGCACAGTaGTGGGTACTGCCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: GTVGHLVVPPRGAAGAPGENSAQ*WVLPRL
Trigger: CAGCCGGGGCAGTACCCAGCACTGTGCACTATTTTC...ACCAGGAGCACCGGCTGCCCCTCTGGGTGGCACTACCAGGTGCCCCACGGTACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp CTGCGGTGGTGGGAAGGCTGCCCAGCAGTGAGGAAGGCGAGTGCAGGGGCTGCGGTGACTGCAGGAGGGTaGCATCAGCTCCAAAGAGGA +
Preference number: 4 (lower is better)
Translates to: LRWWEGCPAVRKASAGAAVTAGG*HQLQRG
Trigger: TCCTCTTTGGAGCTGATGCCACCCTCCTGCAGTCAC...CGCAGCCCCTGCACTCGCCTTCCTCACTGCTGGGCAGCCTTCCCACCACCGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR CCA 90 bp TCCCCAGATGAAAACACCAGCACCAGGAGGTGGGCCGTAGCCCAGGCTGAGGGAGCAGAGCACAGGGCCTaGGAGGCAGTACTCCCGCAG +
Preference number: 4 (lower is better)
Translates to: SPDENTSTRRWAVAQAEGAEHRA*EAVLPQ
Trigger: CTGCGGGAGTACTGCCTCCCAGGCCCTGTGCTCTGC...TCCCTCAGCCTGGGCTACGGCCCACCTCCTGGTGCTGGTGTTTTCATCTGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR CCA 90 bp TTGTGCTCCACGGCCTCCAAGCACTTTCATGAGCGTTCTGCTCCTACGTGGCCAGGGGGCCCGTGTGTGTaGCGGGGCCAGGCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: LCSTASKHFHERSAPTWPGGPCV*RGQARE
Trigger: TTCCCTGGCCTGGCCCCGCCACACACACGGGCCCCC...TGGCCACGTAGGAGCAGAACGCTCATGAAAGTGCTTGGAGGCCGTGGAGCACAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp TGGAAGATAGTGCTCGGGCCCTCACGACGTCCACAGCAGCATTCTCAGCAAGGAGGGGGCCCGTGTGTGTaGCGGGGCCAGGCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: WKIVLGPSRRPQQHSQQGGGPCV*RGQARE
Trigger: TTCCCTGGCCTGGCCCCGCCACACACACGGGCCCCC...TCCTTGCTGAGAATGCTGCTGTGGACGTCGTGAGGGCCCGAGCACTATCTTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000443656.6
ENST00000545865.1
CDS-3UTR CCA 90 bp GGATGGAAGATAGTGCTCGGGCCCTCACGACGTCCACAGCAGCATTCTCAGCAACCACAGGGTCTCGGGTaGGGCCGAGTGGGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: GWKIVLGPSRRPQQHSQQPQGLG*GRVGRG
Trigger: CCCCCTCCCCACTCGGCCCCACCCGAGACCCTGTGG...TTGCTGAGAATGCTGCTGTGGACGTCGTGAGGGCCCGAGCACTATCTTCCATCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443656.6
ENST00000545865.1
CDS-3UTR CCA 90 bp CGCCCGACAACGGCATGGTGCGCCCTGCAAATGTCGGCCAGAGAGGAGCTTTCCAGGGGCACGCCTGAGTaGCCGTCCTTCAAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: RPTTAWCALQMSAREELSRGTPE*PSFKAA
Trigger: AGCTGCCTTGAAGGACGGCCACTCAGGCGTGCCCCT...GGAAAGCTCCTCTCTGGCCGACATTTGCAGGGCGCACCATGCCGTTGTCGGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR CCA 90 bp CTGTTTCTCTGGCCCTCCGGGTCCAGAATGCCCTGCACTGCCTCCTGGCCTCAGGGGCCACTCCCTGGATaGAAGATAGTGCTCGGGCCC +
Preference number: 4 (lower is better)
Translates to: LFLWPSGSRMPCTASWPQGPLPG*KIVLGP
Trigger: GGGCCCGAGCACTATCTTCCATCCAGGGAGTGGCCC...CTGAGGCCAGGAGGCAGTGCAGGGCATTCTGGACCCGGAGGGCCAGAGAAACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp GGGGCCACTCCCTGGATGGAAGATAGTGCTCGGGCCCTCACGACGTCCACAGCACGCCCGACAACGGCATaGTGCGCCCTGCAAATGTCG +
Preference number: 4 (lower is better)
Translates to: GATPWMEDSARALTTSTARPTTA*CALQMS
Trigger: CGACATTTGCAGGGCGCACCATGCCGTTGTCGGGCG...TGCTGTGGACGTCGTGAGGGCCCGAGCACTATCTTCCATCCAGGGAGTGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443656.6
ENST00000545865.1
CDS-3UTR CCA 90 bp CGACACCTTGATGGAAGCCACAGATGGGGGCAGGTACTCGGCCCGCAGGGAGGCGCAGTGTCTCGTGGTTaGCGTGGATCTGGCGGAGGT +
Preference number: 4 (lower is better)
Translates to: RHLDGSHRWGQVLGPQGGAVSRG*RGSGGG
Trigger: ACCTCCGCCAGATCCACGCCAACCACGAGACACTGC...GCCTCCCTGCGGGCCGAGTACCTGCCCCCATCTGTGGCTTCCATCAAGGTGTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR CCA 90 bp GGGTCGTTTGTCACAGCAGAGAAGCACCTCACGGCTCCTACCCGCACTCATCGCCAGGGGCTGCTGCGGTaGTGGGAAGGCTGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: GSFVTAEKHLTAPTRTHRQGLLR*WEGCPA
Trigger: TGCTGGGCAGCCTTCCCACCACCGCAGCAGCCCCTG...GCGATGAGTGCGGGTAGGAGCCGTGAGGTGCTTCTCTGCTGTGACAAACGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp CAGCAGAGGACGCGAAGCTGGACCGGCCAGGTTCAGAGCCCGCCTCGGTTGCTCAATAGTGCACAGTGCTaGGTACTGCCCCGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: QQRTRSWTGQVQSPPRLLNSAQC*VLPRLE
Trigger: CTCCAGCCGGGGCAGTACCCAGCACTGTGCACTATT...GAGCAACCGAGGCGGGCTCTGAACCTGGCCGGTCCAGCTTCGCGTCCTCTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp CCCGACAACGGCATGGTGCGCCCTGCAAATGTCGGCCAGAGAGGAGCTTTCCACACCAGCACCAGGAGGTaGGCCGTAGCCCAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: PDNGMVRPANVGQRGAFHTSTRR*AVAQAE
Trigger: CTCAGCCTGGGCTACGGCCCACCTCCTGGTGCTGGT...GTGGAAAGCTCCTCTCTGGCCGACATTTGCAGGGCGCACCATGCCGTTGTCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR CCA 90 bp GTGGCACGAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGCTTCCGAGGCTTCAGAGCTaGCGGCAGCCCGGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: VARDHGHLQELPACCFVLPRLQS*RQPGSP
Trigger: TGGGGACCCGGGCTGCCGCCAGCTCTGAAGCCTCGG...AAGCACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR CCA 90 bp CCGAGCACCGGGGCCGAGCTGGTCCACGGGGATGGTGTAGGTGATGGCGGAGCATTGCAGAAAGAGTGCTaGGGGCAGGGGCTCCAGATA +
Preference number: 4 (lower is better)
Translates to: PSTGAELVHGDGVGDGGALQKEC*GQGLQI
Trigger: TATCTGGAGCCCCTGCCCCCAGCACTCTTTCTGCAA...TGCTCCGCCATCACCTACACCATCCCCGTGGACCAGCTCGGCCCCGGTGCTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR CAA 72 bp TGGTGGTGCAGGAGATGGGTCTGGGGCCCGTGCCGCTaGACAGCAGTGCACAGCTCACGTTCATGGCCTCGT +
Preference number: 4 (lower is better)
Translates to: WWCRRWVWGPCR*TAVHSSRSWPR
Trigger: ACGAGGCCATGAACGTGAGCTGTGCACTGCTGTCAAGCGGCACGGGCCCCAGACCCATCTCCTGCACCACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR TCA 90 bp TGCCCAGCAGTGAGGAAGGCGAGTGCAGGGGCTGCGGCCGCGGTCAGAGAAGGACGTTCATGGCCTCGTTaGGGCTTGTCAGTGCCTTGT +
Preference number: 4 (lower is better)
Translates to: CPAVRKASAGAAAAVREGRSWPR*GLSVPC
Trigger: ACAAGGCACTGACAAGCCTCAACGAGGCCATGAACG...TCCTTCTCTGACCGCGGCCGCAGCCCCTGCACTCGCCTTCCTCACTGCTGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR TCA 90 bp GCCAGGTTCAGAGCCCGCCTCGGTTGCTCCCAATCAGAATCTGCTTTGTGCTCCGGGGCCCGTGCCGCTTaGCAGCAGTGCACAGCTCAC +
Preference number: 4 (lower is better)
Translates to: ARFRARLGCSQSESALCSGARAA*QQCTAH
Trigger: GTGAGCTGTGCACTGCTGTCAAGCGGCACGGGCCCC...GGAGCACAAAGCAGATTCTGATTGGGAGCAACCGAGGCGGGCTCTGAACCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR TCA 90 bp GTGTGGCACGAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGCCGGGGATGGTGTAGGTaGTGGCGGAGCAGGCCGAGT +
Preference number: 4 (lower is better)
Translates to: VWHETTGTCRSSLHAVLCRGWCR*WRSRPS
Trigger: ACTCGGCCTGCTCCGCCATCACCTACACCATCCCCG...GCACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTGCCACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR TCA 90 bp GTGGCCCTGAAAATAGTGCACAGTGCTGGGTACTGCCCCGGCTGGAGGCACCTAAAGGCTGCCCAGCAGTaGGGAAGGCGAGTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: VALKIVHSAGYCPGWRHLKAAQQ*GRRVQG
Trigger: CCCCTGCACTCGCCTTCCTCACTGCTGGGCAGCCTT...TAGGTGCCTCCAGCCGGGGCAGTACCCAGCACTGTGCACTATTTTCAGGGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp GGACAGACAGGGTCGTTTGTCACAGCAGAGAAGCACCTCACGGCTCCTACCCGCGCCAGCAGCTCCAGGTaGCACACCTGGTCGGGGAAC +
Preference number: 4 (lower is better)
Translates to: GQTGSFVTAEKHLTAPTRASSSR*HTWSGN
Trigger: GTTCCCCGACCAGGTGTGGCACCTGGAGCTGCTGGC...GCGGGTAGGAGCCGTGAGGTGCTTCTCTGCTGTGACAAACGACCCTGTCTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR GCA 90 bp CAGAGTGGGCAGCCGGGCAGGTGTGAACAGTGTGACAAGGGTACCGTGGGGCACAGAGGTCAGAAGGGGTaGTGTGGTACACGCGGCCAC +
Preference number: 4 (lower is better)
Translates to: QSGQPGRCEQCDKGTVGHRGQKG*CGTRGH
Trigger: GTGGCCGCGTGTACCACAGCACCCCTTCTGACCTCT...GTGCCCCACGGTACCCTTGTCACACTGTTCACACCTGCCCGGCTGCCCACTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR GCA 90 bp CAGAGTGGGCAGCCGGGCAGGTGTGAACAGTGTGACAAGGGTACCGTGGGGCACAGTCCAGGTCCAGGCTaGAGGTCATCAGGCGGCCTT +
Preference number: 4 (lower is better)
Translates to: QSGQPGRCEQCDKGTVGHSPGPG*RSSGGL
Trigger: AAGGCCGCCTGATGACCTGCAGCCTGGACCTGGACT...GTGCCCCACGGTACCCTTGTCACACTGTTCACACCTGCCCGGCTGCCCACTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR GCA 90 bp CTCCTACCTCGGGGTCCCAGAGTGGGCAGCCGGGCAGGTGTGAACAGTGTGACAAGCACATCCTGTGTCTaGAGGCGGCTCCAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: LLPRGPRVGSRAGVNSVTSTSCV*RRLQVV
Trigger: CACCACCTGGAGCCGCCTGCAGACACAGGATGTGCT...TGTCACACTGTTCACACCTGCCCGGCTGCCCACTCTGGGACCCCGAGGTAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp GAAGCACCTCACGGCTCCTACCCGCACTCATCGCGGACAGTGCCTGCAGCGGGAGACTGTAGAACAGCGTaGAGGACACGGTCACGGGCA +
Preference number: 4 (lower is better)
Translates to: EAPHGSYPHSSRTVPAAGDCRTA*RTRSRA
Trigger: TGCCCGTGACCGTGTCCTGCACGCTGTTCTACAGTC...TCCCGCTGCAGGCACTGTCCGCGATGAGTGCGGGTAGGAGCCGTGAGGTGCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp CGCCCGACAACGGCATGGTGCGCCCTGCAAATGTCGGCCAGAGAGGAGCTTTCCGTCCTGCTGGCTGGCTaGCAGGCTCCCGACAAGTTT +
Preference number: 4 (lower is better)
Translates to: RPTTAWCALQMSAREELSVLLAG*QAPDKF
Trigger: AAACTTGTCGGGAGCCTGGCAGCCAGCCAGCAGGAC...GGAAAGCTCCTCTCTGGCCGACATTTGCAGGGCGCACCATGCCGTTGTCGGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443656.6
ENST00000545865.1
CDS-3UTR GCA 90 bp CCCGACAACGGCATGGTGCGCCCTGCAAATGTCGGCCAGAGAGGAGCTTTCCACGGCCTGGATGGGCCCTaGTGGGCACAGGTCAGTCAT +
Preference number: 4 (lower is better)
Translates to: PDNGMVRPANVGQRGAFHGLDGP*WAQVSH
Trigger: ATGACTGACCTGTGCCCAGCAGGGCCCATCCAGGCC...GTGGAAAGCTCCTCTCTGGCCGACATTTGCAGGGCGCACCATGCCGTTGTCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443656.6
ENST00000545865.1
CDS-3UTR GCA 90 bp AGCACTTTCATGAGCGTTCTGCTCCTACGTGGCCAGGTCCTACCTTCCCTGACGGGCGAGTGCAGGGGCTaGGGCCGCGGTCAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: STFMSVLLLRGQVLPSLTGECRG*GRGQRR
Trigger: CCTTCTCTGACCGCGGCCGCAGCCCCTGCACTCGCC...CGTCAGGGAAGGTAGGACCTGGCCACGTAGGAGCAGAACGCTCATGAAAGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp CAGGGTCGTTTGTCACAGCAGAGAAGCACCTCACGGCTCCTACCCGCACTCATCCCTGGCCTCAGGGGCTaGTGCGGTGGTGGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: QGRLSQQRSTSRLLPALIPGLRG*CGGGKA
Trigger: AGCCTTCCCACCACCGCAGCAGCCCCTGAGGCCAGG...GATGAGTGCGGGTAGGAGCCGTGAGGTGCTTCTCTGCTGTGACAAACGACCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp TTCAGAGCCCGCCTCGGTTGCTCCCAATCAGAATCTGCTTTGTGCTCCACGGCCCCTGGCCTCAGGGGCTaGTGCGGTGGTGGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: FRARLGCSQSESALCSTAPGLRG*CGGGKA
Trigger: AGCCTTCCCACCACCGCAGCAGCCCCTGAGGCCAGG...GGCCGTGGAGCACAAAGCAGATTCTGATTGGGAGCAACCGAGGCGGGCTCTGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp ACGGACAGACAGGGTCGTTTGTCACAGCAGAGAAGCACCTCACGGCTCCTACCCCAGAGGGGCAGCCGGTaGTCCTGGTGGTGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: TDRQGRLSQQRSTSRLLPQRGSR*SWWCGS
Trigger: GCTGCCACACCACCAGGAGCACCGGCTGCCCCTCTG...GGGTAGGAGCCGTGAGGTGCTTCTCTGCTGTGACAAACGACCCTGTCTGTCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp GGCACGAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGCTTTGCAGAGGGGCAGCCGGTaGTCCTGGTGGTGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: GTRPRALAGAPCMLFCALQRGSR*SWWCGS
Trigger: GCTGCCACACCACCAGGAGCACCGGCTGCCCCTCTG...CAAAGCACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp CACGGCTCCTACCCGCACTCATCGCGGACAGTGCCTGCAGCGGGAGCGGCGCGACTTGCAGGAGCTCCCTaGATGCTGTTTTGTGCTTTG +
Preference number: 4 (lower is better)
Translates to: HGSYPHSSRTVPAAGAARLAGAP*MLFCAL
Trigger: CAAAGCACAAAACAGCATGCAGGGAGCTCCTGCAAG...TCGCGCCGCTCCCGCTGCAGGCACTGTCCGCGATGAGTGCGGGTAGGAGCCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp CAGCAGAGGACGCGAAGCTGGACCGGCCAGGTTCAGAGCCCGCCTCGGTTGCTCGAAAATAGTGCACAGTaGTGGGTACTGCCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: QQRTRSWTGQVQSPPRLLENSAQ*WVLPRL
Trigger: CAGCCGGGGCAGTACCCAGCACTGTGCACTATTTTC...GAGCAACCGAGGCGGGCTCTGAACCTGGCCGGTCCAGCTTCGCGTCCTCTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp ACGGACAGACAGGGTCGTTTGTCACAGCAGAGAAGCACCTCACGGCTCCTACCCACTCATCGCGGACAGTaGCTGCAGCGGGAGCGGCGC +
Preference number: 4 (lower is better)
Translates to: TDRQGRLSQQRSTSRLLPTHRGQ*LQRERR
Trigger: GCGCCGCTCCCGCTGCAGGCACTGTCCGCGATGAGT...GGGTAGGAGCCGTGAGGTGCTTCTCTGCTGTGACAAACGACCCTGTCTGTCCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp TTGTGCTCCACGGCCTCCAAGCACTTTCATGAGCGTTCTGCTCCTACGTGGCCAACCGATCTGGCCTCCTaGCCGGGGGTCCTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: LCSTASKHFHERSAPTWPTDLAS*PGVLPR
Trigger: CCTGGGGAGGACCCCCGGCCAGGAGGCCAGATCGGT...TGGCCACGTAGGAGCAGAACGCTCATGAAAGTGCTTGGAGGCCGTGGAGCACAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR CCA 90 bp CTGTTTCTCTGGCCCTCCGGGTCCAGAATGCCCTGCACTGCCTCCTGGCCTCAGCACCTTCATGCGTCCTaGGAGACGCGGACAGCGAGA +
Preference number: 4 (lower is better)
Translates to: LFLWPSGSRMPCTASWPQHLHAS*ETRTAR
Trigger: TCTCGCTGTCCGCGTCTCCCAGGACGCATGAAGGTG...CTGAGGCCAGGAGGCAGTGCAGGGCATTCTGGACCCGGAGGGCCAGAGAAACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR CCA 90 bp GCTGCTCAGGGCCCAGCGGGGTGCTTCCCCGAGACAGATCCACCACACAGAGGTTGTGGTCATCCTGGCTaGGCCAGGCATCTCAGAGTC +
Preference number: 4 (lower is better)
Translates to: AAQGPAGCFPETDPPHRGCGHPG*ARHLRV
Trigger: GACTCTGAGATGCCTGGCCCAGCCAGGATGACCACA...ACCTCTGTGTGGTGGATCTGTCTCGGGGAAGCACCCCGCTGGGCCCTGAGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR CCA 90 bp GAGGACGCGAAGCTGGACCGGCCAGGTTCAGAGCCCGCCTCGGTTGCTCCCAATTCTCTGTGGTCATCCTaGCTGGGCCAGGCATCTCAG +
Preference number: 4 (lower is better)
Translates to: EDAKLDRPGSEPASVAPNSLWSS*LGQASQ
Trigger: CTGAGATGCCTGGCCCAGCCAGGATGACCACAGAGA...ATTGGGAGCAACCGAGGCGGGCTCTGAACCTGGCCGGTCCAGCTTCGCGTCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR CCA 90 bp ACGGACAGACAGGGTCGTTTGTCACAGCAGAGAAGCACCTCACGGCTCCTACCCTGGTGGTGCAGGAGATaGGTCTGGGGCCCGTGCCGC +
Preference number: 4 (lower is better)
Translates to: TDRQGRLSQQRSTSRLLPWWCRR*VWGPCR
Trigger: GCGGCACGGGCCCCAGACCCATCTCCTGCACCACCA...GGGTAGGAGCCGTGAGGTGCTTCTCTGCTGTGACAAACGACCCTGTCTGTCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp GGCACGAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGCTTTGGCGGGTCCTGCTGGCTaGCTGCCAGGCTCCCGACAA +
Preference number: 4 (lower is better)
Translates to: GTRPRALAGAPCMLFCALAGPAG*LPGSRQ
Trigger: TTGTCGGGAGCCTGGCAGCCAGCCAGCAGGACCCGC...CAAAGCACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp CAGCGGGAGCGGCGCGAGCACCCTCCCCAGATGAAAACACCAGCACCAGGAGGTTCAGGGGCCACTCCCTaGATGGAAGATAGTGCTCGG +
Preference number: 4 (lower is better)
Translates to: QRERREHPPQMKTPAPGGSGATP*MEDSAR
Trigger: CCGAGCACTATCTTCCATCCAGGGAGTGGCCCCTGA...ACCTCCTGGTGCTGGTGTTTTCATCTGGGGAGGGTGCTCGCGCCGCTCCCGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp GGGTCGTTTGTCACAGCAGAGAAGCACCTCACGGCTCCTACCCGCACTCATCGCGGAGATCAGGAGCGCTaGAGCCCTGGGTGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: GSFVTAEKHLTAPTRTHRGDQER*SPGWPA
Trigger: AGCAGGCCACCCAGGGCTCCAGCGCTCCTGATCTCC...GCGATGAGTGCGGGTAGGAGCCGTGAGGTGCTTCTCTGCTGTGACAAACGACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp CTGTTTCTCTGGCCCTCCGGGTCCAGAATGCCCTGCACTGCCTCCTGGCCTCAGGCAGTGTCTCGTGGTTaGCGTGGATCTGGCGGAGGT +
Preference number: 4 (lower is better)
Translates to: LFLWPSGSRMPCTASWPQAVSRG*RGSGGG
Trigger: ACCTCCGCCAGATCCACGCCAACCACGAGACACTGC...CTGAGGCCAGGAGGCAGTGCAGGGCATTCTGGACCCGGAGGGCCAGAGAAACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp GTGGCCCTGAAAATAGTGCACAGTGCTGGGTACTGCCCCGGCTGGAGGCACCTAAGGATGAGGCTGGGGTaGCGCAGCTGCCGGTACACC +
Preference number: 4 (lower is better)
Translates to: VALKIVHSAGYCPGWRHLRMRLG*RSCRYT
Trigger: GGTGTACCGGCAGCTGCGCCACCCCAGCCTCATCCT...TAGGTGCCTCCAGCCGGGGCAGTACCCAGCACTGTGCACTATTTTCAGGGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp TTCAGAGCCCGCCTCGGTTGCTCCCAATCAGAATCTGCTTTGTGCTCCACGGCCGGGCTGCTGCGGTGGTaGGAAGGCTGCCCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: FRARLGCSQSESALCSTAGLLRW*EGCPAV
Trigger: CACTGCTGGGCAGCCTTCCCACCACCGCAGCAGCCC...GGCCGTGGAGCACAAAGCAGATTCTGATTGGGAGCAACCGAGGCGGGCTCTGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp GAAGCACCTCACGGCTCCTACCCGCACTCATCGCGGACAGTGCCTGCAGCGGGAAGCCGGTGCTCCTGGTaGTGTGGCAGCAACAGTTAC +
Preference number: 4 (lower is better)
Translates to: EAPHGSYPHSSRTVPAAGSRCSW*CGSNSY
Trigger: GTAACTGTTGCTGCCACACCACCAGGAGCACCGGCT...TCCCGCTGCAGGCACTGTCCGCGATGAGTGCGGGTAGGAGCCGTGAGGTGCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp GTGGCACAGGAGCTGGCCTCATCCTCCGTGCAGAGCCGGTCGCGCAGGGTCTGCTGCTGTTTTGTGCTTTaGTCTCAGGGAGCACCCTCC +
Preference number: 4 (lower is better)
Translates to: VAQELASSSVQSRSRRVCCCFVL*SQGAPS
Trigger: GGAGGGTGCTCCCTGAGACCAAAGCACAAAACAGCA...GCAGACCCTGCGCGACCGGCTCTGCACGGAGGATGAGGCCAGCTCCTGTGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR CCA 90 bp CGTTTGTCACAGCAGAGAAGCACCTCACGGCTCCTACCCGCACTCATCGCGGACCCGCTGGCCCTTCCTTaGTGTGGCACGAGACCACGG +
Preference number: 4 (lower is better)
Translates to: RLSQQRSTSRLLPALIADPLALP*CGTRPR
Trigger: CCGTGGTCTCGTGCCACACCAAGGAAGGGCCAGCGG...GTCCGCGATGAGTGCGGGTAGGAGCCGTGAGGTGCTTCTCTGCTGTGACAAACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp CCCAGAGTGGGCAGCCGGGCAGGTGTGAACAGTGTGACAAGGGTACCGTGGGGCAATAGTGCACAGTGCTaGGTACTGCCCCGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: PRVGSRAGVNSVTRVPWGNSAQC*VLPRLE
Trigger: CTCCAGCCGGGGCAGTACCCAGCACTGTGCACTATT...GCCCCACGGTACCCTTGTCACACTGTTCACACCTGCCCGGCTGCCCACTCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR TCA 90 bp GTTCAGAGCCCGCCTCGGTTGCTCCCAATCAGAATCTGCTTTGTGCTCCACGGCCATCCCAGCTGGCCTTaGTGGCCAGCATCCGGCCGT +
Preference number: 4 (lower is better)
Translates to: VQSPPRLLPIRICFVLHGHPSWP*WPASGR
Trigger: ACGGCCGGATGCTGGCCATCAAGGCCAGCTGGGATG...GCCGTGGAGCACAAAGCAGATTCTGATTGGGAGCAACCGAGGCGGGCTCTGAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR TCA 90 bp CCCGACAACGGCATGGTGCGCCCTGCAAATGTCGGCCAGAGAGGAGCTTTCCACGCACGCAGGTGGCCATaGGCACATCCTGTGTCTGCA +
Preference number: 4 (lower is better)
Translates to: PDNGMVRPANVGQRGAFHARRWP*AHPVSA
Trigger: TGCAGACACAGGATGTGCTCATGGCCACCTGCGTGC...GTGGAAAGCTCCTCTCTGGCCGACATTTGCAGGGCGCACCATGCCGTTGTCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR TCA 90 bp GGTGTGGCACGAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGGAGCACAGGAGCTGGTaGGCACCTGGATGCACAGGG +
Preference number: 4 (lower is better)
Translates to: GVARDHGHLQELPACCFVEHRSW*APGCTG
Trigger: CCCTGTGCATCCAGGTGCTCACCAGCTCCTGTGCTC...CACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTGCCACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR TCA 90 bp GGCACGAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGCTTTGAGGTCCTACCTTCCCTaGCGGCTCTGGCCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: GTRPRALAGAPCMLFCALRSYLP*RLWPGQ
Trigger: CTGGCCTGGCCAGAGCCGTCAGGGAAGGTAGGACCT...CAAAGCACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR TCA 90 bp GGCAGGTGTGAACAGTGTGACAAGGGTACCGTGGGGCACCTGGTAGTGCCACCCGAGGCACCTAGTTGTTaGGCATTCCGGCCACAGGCC +
Preference number: 4 (lower is better)
Translates to: GRCEQCDKGTVGHLVVPPEAPSC*AFRPQA
Trigger: GGCCTGTGGCCGGAATGCTCAACAACTAGGTGCCTC...GGGTGGCACTACCAGGTGCCCCACGGTACCCTTGTCACACTGTTCACACCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR TCA 90 bp TCCCCAGATGAAAACACCAGCACCAGGAGGTGGGCCGTAGCCCAGGCTGAGGGATCCAGCCATCTGACCTaGCCTCTCCTCTTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: SPDENTSTRRWAVAQAEGSSHLT*PLLLGH
Trigger: GTGGCCCAAGAGGAGAGGTCAGGTCAGATGGCTGGA...TCCCTCAGCCTGGGCTACGGCCCACCTCCTGGTGCTGGTGTTTTCATCTGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425898.2
CDS-3UTR TCA 90 bp GCTGCCTCCCTCCCCGGGTGCCCGCACTGTGAAGCTCACAGTTTGCTCCTTTGTCGGGTGCCCGCACTGTaGAGCTCACAGTTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: AASLPGCPHCEAHSLLLCRVPAL*SSQFAP
Trigger: AGGAGCAAACTGTGAGCTTCACAGTGCGGGCACCCG...ACAAAGGAGCAAACTGTGAGCTTCACAGTGCGGGCACCCGGGGAGGGAGGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545865.1
CDS-3UTR GCA 90 bp CAGGGTCGTTTGTCACAGCAGAGAAGCACCTCACGGCTCCTACCCGCACTCATCGCCAGCAGCTCCAGGTaGCACACCTGGTCGGGGAAC +
Preference number: 4 (lower is better)
Translates to: QGRLSQQRSTSRLLPALIASSSR*HTWSGN
Trigger: GTTCCCCGACCAGGTGTGGCACCTGGAGCTGCTGGC...GATGAGTGCGGGTAGGAGCCGTGAGGTGCTTCTCTGCTGTGACAAACGACCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR GCA 90 bp CAGAGTGGGCAGCCGGGCAGGTGTGAACAGTGTGACAAGGGTACCGTGGGGCACAGGACCACAGGTGACTaGAGGAGGGTGGCATCAGCT +
Preference number: 4 (lower is better)
Translates to: QSGQPGRCEQCDKGTVGHRTTGD*RRVASA
Trigger: AGCTGATGCCACCCTCCTGCAGTCACCTGTGGTCCT...GTGCCCCACGGTACCCTTGTCACACTGTTCACACCTGCCCGGCTGCCCACTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR GCA 90 bp CCCGACAACGGCATGGTGCGCCCTGCAAATGTCGGCCAGAGAGGAGCTTTCCACAGGCAAACACCCTCTTaGTCGGGCAGGACGTCGGAG +
Preference number: 4 (lower is better)
Translates to: PDNGMVRPANVGQRGAFHRQTPS*SGRTSE
Trigger: CTCCGACGTCCTGCCCGAGCAAGAGGGTGTTTGCCT...GTGGAAAGCTCCTCTCTGGCCGACATTTGCAGGGCGCACCATGCCGTTGTCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443656.6
ENST00000545865.1
CDS-3UTR GCA 90 bp ACGTTGGCGCCATCAGGGGCCACTCCCTGGATGGAAGATAGTGCTCGGGCCCTCTGTCCACTGTGTGCCTaGTCAGGGGCAGGCAAACAC +
Preference number: 4 (lower is better)
Translates to: TLAPSGATPWMEDSARALCPLCA*SGAGKH
Trigger: GTGTTTGCCTGCCCCTGAGCAGGCACACAGTGGACA...GAGGGCCCGAGCACTATCTTCCATCCAGGGAGTGGCCCCTGATGGCGCCAACGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443656.6
ENST00000545865.1
CDS-3UTR GCA 90 bp CCTGTTTCTCTGGCCCTCCGGGTCCAGAATGCCCTGCACTGCCTCCTGGCCTCAAGCATGTCCACTGTGTaGCTGCTCAGGGGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: PVSLALRVQNALHCLLASSMSTV*LLRGRQ
Trigger: TTGCCTGCCCCTGAGCAGGCACACAGTGGACATGCT...TGAGGCCAGGAGGCAGTGCAGGGCATTCTGGACCCGGAGGGCCAGAGAAACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp CGTTTGTCACAGCAGAGAAGCACCTCACGGCTCCTACCCGCACTCATCGCGGACGGCCTGGATGGGCCCTaGTGGGCACAGGTCAGTCAT +
Preference number: 4 (lower is better)
Translates to: RLSQQRSTSRLLPALIADGLDGP*WAQVSH
Trigger: ATGACTGACCTGTGCCCAGCAGGGCCCATCCAGGCC...GTCCGCGATGAGTGCGGGTAGGAGCCGTGAGGTGCTTCTCTGCTGTGACAAACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp GGTGTGGCACGAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGGGCCTGGATGGGCCCTaGTGGGCACAGGTCAGTCAT +
Preference number: 4 (lower is better)
Translates to: GVARDHGHLQELPACCFVGLDGP*WAQVSH
Trigger: ATGACTGACCTGTGCCCAGCAGGGCCCATCCAGGCC...CACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTGCCACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp GTGGCACGAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGCTTCTGGGGTGGCGCAGCTaGCGGTACACCTGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: VARDHGHLQELPACCFVLLGWRS*RYTCSS
Trigger: GCTGCTACAGGTGTACCGGCAGCTGCGCCACCCCAG...AAGCACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp CAGCAGAGGACGCGAAGCTGGACCGGCCAGGTTCAGAGCCCGCCTCGGTTGCTCCTCCCAATCAGAATCTaGTTTGTGCTCCACGGCCTC +
Preference number: 4 (lower is better)
Translates to: QQRTRSWTGQVQSPPRLLLPIRI*FVLHGL
Trigger: GAGGCCGTGGAGCACAAAGCAGATTCTGATTGGGAG...GAGCAACCGAGGCGGGCTCTGAACCTGGCCGGTCCAGCTTCGCGTCCTCTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp TGGCACGAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGCTTTAGTGAGGAAGGCGAGTaGAGGGGCTGCGGCCGCGGT +
Preference number: 4 (lower is better)
Translates to: WHETTGTCRSSLHAVLCFSEEGE*RGCGRG
Trigger: ACCGCGGCCGCAGCCCCTGCACTCGCCTTCCTCACT...AAAGCACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp GGCCCTGAAAATAGTGCACAGTGCTGGGTACTGCCCCGGCTGGAGGCACCTAGTCACAGTGCTGGGTACTaGCCCGGCTGGAGGCACCTA +
Preference number: 4 (lower is better)
Translates to: GPENSAQCWVLPRLEAPSHSAGY*PGWRHL
Trigger: TAGGTGCCTCCAGCCGGGGCAGTACCCAGCACTGTG...ACTAGGTGCCTCCAGCCGGGGCAGTACCCAGCACTGTGCACTATTTTCAGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp GATAGTGCTCGGGCCCTCACGACGTCCACAGCAGCATTCTCAGCAAGGAGCCACCACAGTGCTGGGTACTaGCCCGGCTGGAGGCACCTA +
Preference number: 4 (lower is better)
Translates to: DSARALTTSTAAFSARSHHSAGY*PGWRHL
Trigger: TAGGTGCCTCCAGCCGGGGCAGTACCCAGCACTGTG...GTGGCTCCTTGCTGAGAATGCTGCTGTGGACGTCGTGAGGGCCCGAGCACTATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR GCA 90 bp GTGTGGCACGAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGCAGGGGACGTCTCCCGTaGCCCACTAGGGAGAAAGGG +
Preference number: 4 (lower is better)
Translates to: VWHETTGTCRSSLHAVLCRGRLP*PTREKG
Trigger: CCCTTTCTCCCTAGTGGGGCACGGGAGACGTCCCCT...GCACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTGCCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425898.2
CDS-3UTR GCA 90 bp CATCAGGGGCCACTCCCTGGATGGAAGATAGTGCTCGGGCCCTCACGACGTCCAACGCCTGATGAACGGTaGTGGGGCTTTGGGGTGAGC +
Preference number: 4 (lower is better)
Translates to: HQGPLPGWKIVLGPSRRPTPDER*WGFGVS
Trigger: GCTCACCCCAAAGCCCCAGCACCGTTCATCAGGCGT...TGGACGTCGTGAGGGCCCGAGCACTATCTTCCATCCAGGGAGTGGCCCCTGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000545865.1
CDS-3UTR CCA 90 bp GTTCAGAGCCCGCCTCGGTTGCTCCCAATCAGAATCTGCTTTGTGCTCCACGGCTCCAGGTGCCACACCTaGTCGGGGAACCGGAACGCC +
Preference number: 4 (lower is better)
Translates to: VQSPPRLLPIRICFVLHGSRCHT*SGNRNA
Trigger: GGCGTTCCGGTTCCCCGACCAGGTGTGGCACCTGGA...GCCGTGGAGCACAAAGCAGATTCTGATTGGGAGCAACCGAGGCGGGCTCTGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR CCA 90 bp CCTTCATGCGTCCTGGGAGACGCGGACAGCGAGACGACACTGCAGATGTTCAGGATCACGGGGGAAGGCTaGTCACCGTCCTCGCTGTCC +
Preference number: 4 (lower is better)
Translates to: PSCVLGDADSETTLQMFRITGEG*SPSSLS
Trigger: GGACAGCGAGGACGGTGACCAGCCTTCCCCCGTGAT...CCTGAACATCTGCAGTGTCGTCTCGCTGTCCGCGTCTCCCAGGACGCATGAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR CCA 90 bp CGTTTGTCACAGCAGAGAAGCACCTCACGGCTCCTACCCGCACTCATCGCGGACGGTCGTGCGGGACCCTaGAGCCTGATGGTGACACAG +
Preference number: 4 (lower is better)
Translates to: RLSQQRSTSRLLPALIADGRAGP*SLMVTQ
Trigger: CTGTGTCACCATCAGGCTCCAGGGTCCCGCACGACC...GTCCGCGATGAGTGCGGGTAGGAGCCGTGAGGTGCTTCTCTGCTGTGACAAACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR CCA 90 bp CCTTCATGCGTCCTGGGAGACGCGGACAGCGAGACGACACTGCAGATGTTCAGGGGTCGTGCGGGACCCTaGAGCCTGATGGTGACACAG +
Preference number: 4 (lower is better)
Translates to: PSCVLGDADSETTLQMFRGRAGP*SLMVTQ
Trigger: CTGTGTCACCATCAGGCTCCAGGGTCCCGCACGACC...CCTGAACATCTGCAGTGTCGTCTCGCTGTCCGCGTCTCCCAGGACGCATGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR CCA 90 bp CTCCTACCTCGGGGTCCCAGAGTGGGCAGCCGGGCAGGTGTGAACAGTGTGACATCTCTGTGGTCATCCTaGCTGGGCCAGGCATCTCAG +
Preference number: 4 (lower is better)
Translates to: LLPRGPRVGSRAGVNSVTSLWSS*LGQASQ
Trigger: CTGAGATGCCTGGCCCAGCCAGGATGACCACAGAGA...TGTCACACTGTTCACACCTGCCCGGCTGCCCACTCTGGGACCCCGAGGTAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR CCA 90 bp AGACACTGCAGCATGTCCACTGTGTGCCTGCTCAGGGGCAGGCAAACACCCTCTGCAGGCGGCTCCAGGTaGTGCTGGTGGTGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: RHCSMSTVCLLRGRQTPSAGGSR*CWWCRR
Trigger: TCTCCTGCACCACCAGCACCACCTGGAGCCGCCTGC...AGAGGGTGTTTGCCTGCCCCTGAGCAGGCACACAGTGGACATGCTGCAGTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR CCA 90 bp GGACAGACAGGGTCGTTTGTCACAGCAGAGAAGCACCTCACGGCTCCTACCCGCCACAGGGTCCACCCCTaGTCCAGGCTGAAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GQTGSFVTAEKHLTAPTRHRVHP*SRLKLL
Trigger: CAGCAGCTTCAGCCTGGACCAGGGGTGGACCCTGTG...GCGGGTAGGAGCCGTGAGGTGCTTCTCTGCTGTGACAAACGACCCTGTCTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp GAATCTGCTTTGTGCTCCACGGCCTCCAAGCACTTTCATGAGCGTTCTGCTCCTCCACAGGGTCTCGGGTaGGGCCGAGTGGGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: ESALCSTASKHFHERSAPPQGLG*GRVGRG
Trigger: CCCCCTCCCCACTCGGCCCCACCCGAGACCCTGTGG...AGGAGCAGAACGCTCATGAAAGTGCTTGGAGGCCGTGGAGCACAAAGCAGATTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp GATAGTGCTCGGGCCCTCACGACGTCCACAGCAGCATTCTCAGCAAGGAGCCACGGGCCACTCCCTGGATaGAAGATAGTGCTCGGGCCC +
Preference number: 4 (lower is better)
Translates to: DSARALTTSTAAFSARSHGPLPG*KIVLGP
Trigger: GGGCCCGAGCACTATCTTCCATCCAGGGAGTGGCCC...GTGGCTCCTTGCTGAGAATGCTGCTGTGGACGTCGTGAGGGCCCGAGCACTATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443656.6
ENST00000545865.1
CDS-3UTR CCA 90 bp GGGGCCACTCCCTGGATGGAAGATAGTGCTCGGGCCCTCACGACGTCCACAGCATCAGGGGCCACTCCCTaGATGGAAGATAGTGCTCGG +
Preference number: 4 (lower is better)
Translates to: GATPWMEDSARALTTSTASGATP*MEDSAR
Trigger: CCGAGCACTATCTTCCATCCAGGGAGTGGCCCCTGA...TGCTGTGGACGTCGTGAGGGCCCGAGCACTATCTTCCATCCAGGGAGTGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443656.6
ENST00000545865.1
CDS-3UTR CCA 90 bp GGGTCGTTTGTCACAGCAGAGAAGCACCTCACGGCTCCTACCCGCACTCATCGCCGCCCGACAACGGCATaGTGCGCCCTGCAAATGTCG +
Preference number: 4 (lower is better)
Translates to: GSFVTAEKHLTAPTRTHRRPTTA*CALQMS
Trigger: CGACATTTGCAGGGCGCACCATGCCGTTGTCGGGCG...GCGATGAGTGCGGGTAGGAGCCGTGAGGTGCTTCTCTGCTGTGACAAACGACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp AGCACTTTCATGAGCGTTCTGCTCCTACGTGGCCAGGTCCTACCTTCCCTGACGGGAGCGCTGGAGCCCTaGGTGGCCTGCTCTGTCACC +
Preference number: 4 (lower is better)
Translates to: STFMSVLLLRGQVLPSLTGALEP*VACSVT
Trigger: GGTGACAGAGCAGGCCACCCAGGGCTCCAGCGCTCC...CGTCAGGGAAGGTAGGACCTGGCCACGTAGGAGCAGAACGCTCATGAAAGTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp GGACAGACAGGGTCGTTTGTCACAGCAGAGAAGCACCTCACGGCTCCTACCCGCCGCAGCAGTGTCTCGTaGTTGGCGTGGATCTGGCGG +
Preference number: 4 (lower is better)
Translates to: GQTGSFVTAEKHLTAPTRRSSVS*LAWIWR
Trigger: CCGCCAGATCCACGCCAACCACGAGACACTGCTGCG...GCGGGTAGGAGCCGTGAGGTGCTTCTCTGCTGTGACAAACGACCCTGTCTGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp GTGGCCCTGAAAATAGTGCACAGTGCTGGGTACTGCCCCGGCTGGAGGCACCTACGCAGCAGTGTCTCGTaGTTGGCGTGGATCTGGCGG +
Preference number: 4 (lower is better)
Translates to: VALKIVHSAGYCPGWRHLRSSVS*LAWIWR
Trigger: CCGCCAGATCCACGCCAACCACGAGACACTGCTGCG...TAGGTGCCTCCAGCCGGGGCAGTACCCAGCACTGTGCACTATTTTCAGGGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp GGCCCTGAAAATAGTGCACAGTGCTGGGTACTGCCCCGGCTGGAGGCACCTAGTCGGTGGCACAGGAGCTaGCCTCATCCTCCGTGCAGA +
Preference number: 4 (lower is better)
Translates to: GPENSAQCWVLPRLEAPSRWHRS*PHPPCR
Trigger: TCTGCACGGAGGATGAGGCCAGCTCCTGTGCCACCG...ACTAGGTGCCTCCAGCCGGGGCAGTACCCAGCACTGTGCACTATTTTCAGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp GGACAGACAGGGTCGTTTGTCACAGCAGAGAAGCACCTCACGGCTCCTACCCGCCGGTGGCACAGGAGCTaGCCTCATCCTCCGTGCAGA +
Preference number: 4 (lower is better)
Translates to: GQTGSFVTAEKHLTAPTRRWHRS*PHPPCR
Trigger: TCTGCACGGAGGATGAGGCCAGCTCCTGTGCCACCG...GCGGGTAGGAGCCGTGAGGTGCTTCTCTGCTGTGACAAACGACCCTGTCTGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp GGCACGAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGCTTTGAGGATGAGGCTGGGGTaGCGCAGCTGCCGGTACACC +
Preference number: 4 (lower is better)
Translates to: GTRPRALAGAPCMLFCALRMRLG*RSCRYT
Trigger: GGTGTACCGGCAGCTGCGCCACCCCAGCCTCATCCT...CAAAGCACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp CACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGCTTTGGTCTCAGGGAGCACCCGGGCTGCTGCGGTGGTaGGAAGGCTGCCCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: HLQELPACCFVLWSQGAPGLLRW*EGCPAV
Trigger: CACTGCTGGGCAGCCTTCCCACCACCGCAGCAGCCC...GGGTGCTCCCTGAGACCAAAGCACAAAACAGCATGCAGGGAGCTCCTGCAAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp CCAAGCACTTTCATGAGCGTTCTGCTCCTACGTGGCCAGGTCCTACCTTCCCTGGGGCTGCTGCGGTGGTaGGAAGGCTGCCCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: PSTFMSVLLLRGQVLPSLGLLRW*EGCPAV
Trigger: CACTGCTGGGCAGCCTTCCCACCACCGCAGCAGCCC...CAGGGAAGGTAGGACCTGGCCACGTAGGAGCAGAACGCTCATGAAAGTGCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp CAGCAGAGGACGCGAAGCTGGACCGGCCAGGTTCAGAGCCCGCCTCGGTTGCTCTGCTGTTTTGTGCTTTaGTCTCAGGGAGCACCCTCC +
Preference number: 4 (lower is better)
Translates to: QQRTRSWTGQVQSPPRLLCCFVL*SQGAPS
Trigger: GGAGGGTGCTCCCTGAGACCAAAGCACAAAACAGCA...GAGCAACCGAGGCGGGCTCTGAACCTGGCCGGTCCAGCTTCGCGTCCTCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp CTGTTTCTCTGGCCCTCCGGGTCCAGAATGCCCTGCACTGCCTCCTGGCCTCAGAATAGTGCACAGTGCTaGGTACTGCCCCGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: LFLWPSGSRMPCTASWPQNSAQC*VLPRLE
Trigger: CTCCAGCCGGGGCAGTACCCAGCACTGTGCACTATT...CTGAGGCCAGGAGGCAGTGCAGGGCATTCTGGACCCGGAGGGCCAGAGAAACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp GTGGCACGAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGCTTACCAGCACCAGGAGGTaGGCCGTAGCCCAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: VARDHGHLQELPACCFVLTSTRR*AVAQAE
Trigger: CTCAGCCTGGGCTACGGCCCACCTCCTGGTGCTGGT...AAGCACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp CCCGACAACGGCATGGTGCGCCCTGCAAATGTCGGCCAGAGAGGAGCTTTCCACCCTGATGAACGGTGCTaGGGCTTTGGGGTGAGCGCA +
Preference number: 4 (lower is better)
Translates to: PDNGMVRPANVGQRGAFHPDERC*GFGVSA
Trigger: TGCGCTCACCCCAAAGCCCCAGCACCGTTCATCAGG...GTGGAAAGCTCCTCTCTGGCCGACATTTGCAGGGCGCACCATGCCGTTGTCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545865.1
3UTR CAA 72 bp CGAAGCTGGACCGGCCAGGTTCAGAGCCCGCCTCGGTaGCTCCCAATCAGAATCTGCTTTGTGCTCCACGGC +
Preference number: 4 (lower is better)
Translates to: RSWTGQVQSPPR*LPIRICFVLHG
Trigger: GCCGTGGAGCACAAAGCAGATTCTGATTGGGAGCAACCGAGGCGGGCTCTGAACCTGGCCGGTCCAGCTTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR TCA 90 bp TGGCACGAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGCTTTGGCCCTGCACCAGGGTaGCCAGCACACTGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: WHETTGTCRSSLHAVLCFGPAPG*PAHCPA
Trigger: TGCTGGACAGTGTGCTGGTCACCCTGGTGCAGGGCC...AAAGCACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR TCA 90 bp CACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGCTTTGGTCTCAGGGAGCACCCAGCATCCGGCCGTGGTaGCCAAAGGCCACCAGGCAG +
Preference number: 4 (lower is better)
Translates to: HLQELPACCFVLWSQGAPSIRPW*PKATRQ
Trigger: CTGCCTGGTGGCCTTTGGTCACCACGGCCGGATGCT...GGGTGCTCCCTGAGACCAAAGCACAAAACAGCATGCAGGGAGCTCCTGCAAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR TCA 90 bp CACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGCTTTGGTCTCAGGGAGCACCCCATCCCAGCTGGCCTTaGTGGCCAGCATCCGGCCGT +
Preference number: 4 (lower is better)
Translates to: HLQELPACCFVLWSQGAPHPSWP*WPASGR
Trigger: ACGGCCGGATGCTGGCCATCAAGGCCAGCTGGGATG...GGGTGCTCCCTGAGACCAAAGCACAAAACAGCATGCAGGGAGCTCCTGCAAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR TCA 90 bp GGTGTGGCACGAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGGCACGCAGGTGGCCATaGGCACATCCTGTGTCTGCA +
Preference number: 4 (lower is better)
Translates to: GVARDHGHLQELPACCFVARRWP*AHPVSA
Trigger: TGCAGACACAGGATGTGCTCATGGCCACCTGCGTGC...CACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTGCCACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR TCA 90 bp CATCAGGGGCCACTCCCTGGATGGAAGATAGTGCTCGGGCCCTCACGACGTCCAACCCCTGGTCCAGGCTaGAGCTGCTGCTGTTCTCTA +
Preference number: 4 (lower is better)
Translates to: HQGPLPGWKIVLGPSRRPTPGPG*SCCCSL
Trigger: TAGAGAACAGCAGCAGCTTCAGCCTGGACCAGGGGT...TGGACGTCGTGAGGGCCCGAGCACTATCTTCCATCCAGGGAGTGGCCCCTGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR TCA 90 bp GTTCAGAGCCCGCCTCGGTTGCTCCCAATCAGAATCTGCTTTGTGCTCCACGGCGAGCACAGGAGCTGGTaGGCACCTGGATGCACAGGG +
Preference number: 4 (lower is better)
Translates to: VQSPPRLLPIRICFVLHGEHRSW*APGCTG
Trigger: CCCTGTGCATCCAGGTGCTCACCAGCTCCTGTGCTC...GCCGTGGAGCACAAAGCAGATTCTGATTGGGAGCAACCGAGGCGGGCTCTGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR TCA 90 bp CCAAGCACTTTCATGAGCGTTCTGCTCCTACGTGGCCAGGTCCTACCTTCCCTGCGGGGATGGTGTAGGTaGTGGCGGAGCAGGCCGAGT +
Preference number: 4 (lower is better)
Translates to: PSTFMSVLLLRGQVLPSLRGWCR*WRSRPS
Trigger: ACTCGGCCTGCTCCGCCATCACCTACACCATCCCCG...CAGGGAAGGTAGGACCTGGCCACGTAGGAGCAGAACGCTCATGAAAGTGCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR TCA 90 bp GTTCAGAGCCCGCCTCGGTTGCTCCCAATCAGAATCTGCTTTGTGCTCCACGGCCGCCCACCACCTCCCTaGGACTGTAGAACAGCGTGC +
Preference number: 4 (lower is better)
Translates to: VQSPPRLLPIRICFVLHGRPPPP*DCRTAC
Trigger: GCACGCTGTTCTACAGTCTCAGGGAGGTGGTGGGCG...GCCGTGGAGCACAAAGCAGATTCTGATTGGGAGCAACCGAGGCGGGCTCTGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR TCA 90 bp GGCACGAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGCTTTGGCTCCGCCGACACCTTaGTGGAAGCCACAGATGGGG +
Preference number: 4 (lower is better)
Translates to: GTRPRALAGAPCMLFCALAPPTP*WKPQMG
Trigger: CCCCATCTGTGGCTTCCATCAAGGTGTCGGCGGAGC...CAAAGCACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR TCA 90 bp GCGCCCTGCAAATGTCGGCCAGAGAGGAGCTTTCCACTTGAATCTCCACGGCCTCCTTCAAGGCAGCTCTaGGCAGCTCCGCCGACACCT +
Preference number: 4 (lower is better)
Translates to: APCKCRPERSFPLESPRPPSRQL*AAPPTP
Trigger: AGGTGTCGGCGGAGCTGCTCAGAGCTGCCTTGAAGG...AGGCCGTGGAGATTCAAGTGGAAAGCTCCTCTCTGGCCGACATTTGCAGGGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443656.6
ENST00000545865.1
CDS-3UTR TCA 90 bp TTGTGCTCCACGGCCTCCAAGCACTTTCATGAGCGTTCTGCTCCTACGTGGCCAAGGTCCTACCTTCCCTaGCGGCTCTGGCCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: LCSTASKHFHERSAPTWPRSYLP*RLWPGQ
Trigger: CTGGCCTGGCCAGAGCCGTCAGGGAAGGTAGGACCT...TGGCCACGTAGGAGCAGAACGCTCATGAAAGTGCTTGGAGGCCGTGGAGCACAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR TCA 90 bp TCCAAGCACTTTCATGAGCGTTCTGCTCCTACGTGGCCAGGTCCTACCTTCCCTGGTCCCCAAGCGCGATaGGGTGGGGCTGCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: SKHFHERSAPTWPGPTFPGPQAR*GGAARS
Trigger: AGAGCGAGCAGCCCCACCTCATCGCGCTTGGGGACC...AGGGAAGGTAGGACCTGGCCACGTAGGAGCAGAACGCTCATGAAAGTGCTTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR GCA 90 bp AAAATAGTGCACAGTGCTGGGTACTGCCCCGGCTGGAGGCACCTAGTTGTTGAGCCCCCGAGGAGGTCGTaGGGGACCCTGGAGCCTGAT +
Preference number: 4 (lower is better)
Translates to: KIVHSAGYCPGWRHLVVEPPRRS*GTLEPD
Trigger: ATCAGGCTCCAGGGTCCCGCACGACCTCCTCGGGGG...CTCAACAACTAGGTGCCTCCAGCCGGGGCAGTACCCAGCACTGTGCACTATTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR GCA 90 bp GTGGCCCTGAAAATAGTGCACAGTGCTGGGTACTGCCCCGGCTGGAGGCACCTAGTCCTGCTGGCTGGCTaGCAGGCTCCCGACAAGTTT +
Preference number: 4 (lower is better)
Translates to: VALKIVHSAGYCPGWRHLVLLAG*QAPDKF
Trigger: AAACTTGTCGGGAGCCTGGCAGCCAGCCAGCAGGAC...TAGGTGCCTCCAGCCGGGGCAGTACCCAGCACTGTGCACTATTTTCAGGGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp TCCCCAGATGAAAACACCAGCACCAGGAGGTGGGCCGTAGCCCAGGCTGAGGGAATCTGGCGGAGGTACTaGACACGGAGATCAGGAGCG +
Preference number: 4 (lower is better)
Translates to: SPDENTSTRRWAVAQAEGIWRRY*TRRSGA
Trigger: CGCTCCTGATCTCCGTGTGCAGTACCTCCGCCAGAT...TCCCTCAGCCTGGGCTACGGCCCACCTCCTGGTGCTGGTGTTTTCATCTGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp CACCTCTCGGACGATGAGGTGAACGTTGGCGCCATCAGGGGCCACTCCCTGGATATCTGGCGGAGGTACTaGACACGGAGATCAGGAGCG +
Preference number: 4 (lower is better)
Translates to: HLSDDEVNVGAIRGHSLDIWRRY*TRRSGA
Trigger: CGCTCCTGATCTCCGTGTGCAGTACCTCCGCCAGAT...ATCCAGGGAGTGGCCCCTGATGGCGCCAACGTTCACCTCATCGTCCGAGAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR GCA 90 bp TGGCACGAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGCTTTCGGTGGTGGGAAGGCTaGCCAGCAGTGAGGAAGGCG +
Preference number: 4 (lower is better)
Translates to: WHETTGTCRSSLHAVLCFRWWEG*PAVRKA
Trigger: CGCCTTCCTCACTGCTGGGCAGCCTTCCCACCACCG...AAAGCACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp TGGTGTGGCACGAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTCAGAATGCCCTGCACTaGCTCCTGGCCTCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: WCGTRPRALAGAPCMLFCQNALH*LLASGA
Trigger: AGCCCCTGAGGCCAGGAGGCAGTGCAGGGCATTCTG...ACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTGCCACACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp ACGGACAGACAGGGTCGTTTGTCACAGCAGAGAAGCACCTCACGGCTCCTACCCCAGAATGCCCTGCACTaGCTCCTGGCCTCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: TDRQGRLSQQRSTSRLLPQNALH*LLASGA
Trigger: AGCCCCTGAGGCCAGGAGGCAGTGCAGGGCATTCTG...GGGTAGGAGCCGTGAGGTGCTTCTCTGCTGTGACAAACGACCCTGTCTGTCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp TGCCCAGCAGTGAGGAAGGCGAGTGCAGGGGCTGCGGCCGCGGTCAGAGAAGGACTGCATGCTGTTTTGTaGTTTGGTCTCAGGGAGCAC +
Preference number: 4 (lower is better)
Translates to: CPAVRKASAGAAAAVREGLHAVL*FGLREH
Trigger: GTGCTCCCTGAGACCAAAGCACAAAACAGCATGCAG...TCCTTCTCTGACCGCGGCCGCAGCCCCTGCACTCGCCTTCCTCACTGCTGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp CTGCTGCGGTGGTGGGAAGGCTGCCCAGCAGTGAGGAAGGCGAGTGCAGGGGCTCAGGAGCTCCCTGCATaGTGTTTTGTGCTTTGGTCT +
Preference number: 4 (lower is better)
Translates to: LLRWWEGCPAVRKASAGAQELPA*CFVLWS
Trigger: AGACCAAAGCACAAAACAGCATGCAGGGAGCTCCTG...AGCCCCTGCACTCGCCTTCCTCACTGCTGGGCAGCCTTCCCACCACCGCAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp GGCCCTGAAAATAGTGCACAGTGCTGGGTACTGCCCCGGCTGGAGGCACCTAGTGAGACCACGGGCACTTaGAGGAGCTCCCTGCATGCT +
Preference number: 4 (lower is better)
Translates to: GPENSAQCWVLPRLEAPSETTGT*RSSLHA
Trigger: AGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTC...ACTAGGTGCCTCCAGCCGGGGCAGTACCCAGCACTGTGCACTATTTTCAGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp GTGGCACGAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGCTTCGAGCTCGCTCCCGGTaGACAGGAAGACCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: VARDHGHLQELPACCFVLRARSR*TGRPLP
Trigger: AGGCAGAGGTCTTCCTGTCCACCGGGAGCGAGCTCG...AAGCACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR CCA 90 bp GCGCCCTGCAAATGTCGGCCAGAGAGGAGCTTTCCACTTGAATCTCCACGGCCTCGAGCTCGCTCCCGGTaGACAGGAAGACCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: APCKCRPERSFPLESPRPRARSR*TGRPLP
Trigger: AGGCAGAGGTCTTCCTGTCCACCGGGAGCGAGCTCG...AGGCCGTGGAGATTCAAGTGGAAAGCTCCTCTCTGGCCGACATTTGCAGGGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR CCA 90 bp TGGTGTGGCACGAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTATCACGGGGGAAGGCTaGTCACCGTCCTCGCTGTCC +
Preference number: 4 (lower is better)
Translates to: WCGTRPRALAGAPCMLFCITGEG*SPSSLS
Trigger: GGACAGCGAGGACGGTGACCAGCCTTCCCCCGTGAT...ACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTGCCACACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR CCA 90 bp TGGCACGAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGCTTTTCAGAAGGGGTGCTGTaGTACACGCGGCCACCCCCG +
Preference number: 4 (lower is better)
Translates to: WHETTGTCRSSLHAVLCFSEGVL*YTRPPP
Trigger: CGGGGGTGGCCGCGTGTACCACAGCACCCCTTCTGA...AAAGCACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR CCA 90 bp CCTTCATGCGTCCTGGGAGACGCGGACAGCGAGACGACACTGCAGATGTTCAGGGACCTGCACTCTCTGTaGTCATCCTGGCTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: PSCVLGDADSETTLQMFRDLHSL*SSWLGQ
Trigger: CTGGCCCAGCCAGGATGACCACAGAGAGTGCAGGTC...CCTGAACATCTGCAGTGTCGTCTCGCTGTCCGCGTCTCCCAGGACGCATGAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR CCA 90 bp TGCCCAGCAGTGAGGAAGGCGAGTGCAGGGGCTGCGGCCGCGGTCAGAGAAGGAAGTGCCTTGTTCCGCTaGTCAACCGCCTTCTTTAGA +
Preference number: 4 (lower is better)
Translates to: CPAVRKASAGAAAAVREGSALFR*STAFFR
Trigger: TCTAAAGAAGGCGGTTGACCAGCGGAACAAGGCACT...TCCTTCTCTGACCGCGGCCGCAGCCCCTGCACTCGCCTTCCTCACTGCTGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp TGGCGGAGGTACTGCACACGGAGATCAGGAGCGCTGGAGCCCTGGGTGGCCTGCAGTGCCTTGTTCCGCTaGTCAACCGCCTTCTTTAGA +
Preference number: 4 (lower is better)
Translates to: WRRYCTRRSGALEPWVACSALFR*STAFFR
Trigger: TCTAAAGAAGGCGGTTGACCAGCGGAACAAGGCACT...GCAGGCCACCCAGGGCTCCAGCGCTCCTGATCTCCGTGTGCAGTACCTCCGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR CCA 90 bp TGGTGTGGCACGAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTCACAGGGTCCACCCCTaGTCCAGGCTGAAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: WCGTRPRALAGAPCMLFCHRVHP*SRLKLL
Trigger: CAGCAGCTTCAGCCTGGACCAGGGGTGGACCCTGTG...ACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTGCCACACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp ACGGACAGACAGGGTCGTTTGTCACAGCAGAGAAGCACCTCACGGCTCCTACCCCACAGGGTCCACCCCTaGTCCAGGCTGAAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TDRQGRLSQQRSTSRLLPHRVHP*SRLKLL
Trigger: CAGCAGCTTCAGCCTGGACCAGGGGTGGACCCTGTG...GGGTAGGAGCCGTGAGGTGCTTCTCTGCTGTGACAAACGACCCTGTCTGTCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp GTTACAAACTCACCCCAAGTCCAAACCCCAGAAATCCTGTTTCTCTGGCCCTCCGGGGGCCCGTGTGTGTaGCGGGGCCAGGCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: VTNSPQVQTPEILFLWPSGGPCV*RGQARE
Trigger: TTCCCTGGCCTGGCCCCGCCACACACACGGGCCCCC...GGAGGGCCAGAGAAACAGGATTTCTGGGGTTTGGACTTGGGGTGAGTTTGTAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp ACGGACAGACAGGGTCGTTTGTCACAGCAGAGAAGCACCTCACGGCTCCTACCCGATGGAAGCCACAGATaGGGGCAGGTACTCGGCCCG +
Preference number: 4 (lower is better)
Translates to: TDRQGRLSQQRSTSRLLPDGSHR*GQVLGP
Trigger: CGGGCCGAGTACCTGCCCCCATCTGTGGCTTCCATC...GGGTAGGAGCCGTGAGGTGCTTCTCTGCTGTGACAAACGACCCTGTCTGTCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp TTCAGAGCCCGCCTCGGTTGCTCCCAATCAGAATCTGCTTTGTGCTCCACGGCCAGGGGCACGCCTGAGTaGCCGTCCTTCAAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: FRARLGCSQSESALCSTARGTPE*PSFKAA
Trigger: AGCTGCCTTGAAGGACGGCCACTCAGGCGTGCCCCT...GGCCGTGGAGCACAAAGCAGATTCTGATTGGGAGCAACCGAGGCGGGCTCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp ACTTTCATGAGCGTTCTGCTCCTACGTGGCCAGGTCCTACCTTCCCTGACGGCTGGAGATCAGGAGCGCTaGAGCCCTGGGTGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: TFMSVLLLRGQVLPSLTAGDQER*SPGWPA
Trigger: AGCAGGCCACCCAGGGCTCCAGCGCTCCTGATCTCC...AGCCGTCAGGGAAGGTAGGACCTGGCCACGTAGGAGCAGAACGCTCATGAAAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp CGTTTGTCACAGCAGAGAAGCACCTCACGGCTCCTACCCGCACTCATCGCGGACTGGTTGGCGTGGATCTaGCGGAGGTACTGCACACGG +
Preference number: 4 (lower is better)
Translates to: RLSQQRSTSRLLPALIADWLAWI*RRYCTR
Trigger: CCGTGTGCAGTACCTCCGCCAGATCCACGCCAACCA...GTCCGCGATGAGTGCGGGTAGGAGCCGTGAGGTGCTTCTCTGCTGTGACAAACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp CACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGCTTTGGTCTCAGGGAGCACCCAGGATGAGGCTGGGGTaGCGCAGCTGCCGGTACACC +
Preference number: 4 (lower is better)
Translates to: HLQELPACCFVLWSQGAPRMRLG*RSCRYT
Trigger: GGTGTACCGGCAGCTGCGCCACCCCAGCCTCATCCT...GGGTGCTCCCTGAGACCAAAGCACAAAACAGCATGCAGGGAGCTCCTGCAAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp ACGGACAGACAGGGTCGTTTGTCACAGCAGAGAAGCACCTCACGGCTCCTACCCGGCCCTTCCTTGGTGTaGCACGAGACCACGGGCACT +
Preference number: 4 (lower is better)
Translates to: TDRQGRLSQQRSTSRLLPGPSLV*HETTGT
Trigger: AGTGCCCGTGGTCTCGTGCCACACCAAGGAAGGGCC...GGGTAGGAGCCGTGAGGTGCTTCTCTGCTGTGACAAACGACCCTGTCTGTCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp GTGGCACGAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGCTTGGCCCTTCCTTGGTGTaGCACGAGACCACGGGCACT +
Preference number: 4 (lower is better)
Translates to: VARDHGHLQELPACCFVLGPSLV*HETTGT
Trigger: AGTGCCCGTGGTCTCGTGCCACACCAAGGAAGGGCC...AAGCACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp GGTGCGCCCTGCAAATGTCGGCCAGAGAGGAGCTTTCCACTTGAATCTCCACGGGGCCCTTCCTTGGTGTaGCACGAGACCACGGGCACT +
Preference number: 4 (lower is better)
Translates to: GAPCKCRPERSFPLESPRGPSLV*HETTGT
Trigger: AGTGCCCGTGGTCTCGTGCCACACCAAGGAAGGGCC...CCGTGGAGATTCAAGTGGAAAGCTCCTCTCTGGCCGACATTTGCAGGGCGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR CCA 90 bp GGATGGAAGATAGTGCTCGGGCCCTCACGACGTCCACAGCAGCATTCTCAGCAACCGCTGGCCCTTCCTTaGTGTGGCACGAGACCACGG +
Preference number: 4 (lower is better)
Translates to: GWKIVLGPSRRPQQHSQQPLALP*CGTRPR
Trigger: CCGTGGTCTCGTGCCACACCAAGGAAGGGCCAGCGG...TTGCTGAGAATGCTGCTGTGGACGTCGTGAGGGCCCGAGCACTATCTTCCATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR CCA 90 bp GTGGCCCTGAAAATAGTGCACAGTGCTGGGTACTGCCCCGGCTGGAGGCACCTAGGGTACTGCCCCGGCTaGAGGCACCTAGTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: VALKIVHSAGYCPGWRHLGYCPG*RHLVVE
Trigger: CTCAACAACTAGGTGCCTCCAGCCGGGGCAGTACCC...TAGGTGCCTCCAGCCGGGGCAGTACCCAGCACTGTGCACTATTTTCAGGGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp TTGTGCTCCACGGCCTCCAAGCACTTTCATGAGCGTTCTGCTCCTACGTGGCCACACGCAGGGGCCGGGTaGTGCATTACCCCACCCTTG +
Preference number: 4 (lower is better)
Translates to: LCSTASKHFHERSAPTWPHAGAG*CITPPL
Trigger: CAAGGGTGGGGTAATGCACCACCCGGCCCCTGCGTG...TGGCCACGTAGGAGCAGAACGCTCATGAAAGTGCTTGGAGGCCGTGGAGCACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425898.2
CDS-3UTR CCA 90 bp GGGTCGTTTGTCACAGCAGAGAAGCACCTCACGGCTCCTACCCGCACTCATCGCCACACCGAGCCTCTCTaGAAGCTGCCTCCAGCCATC +
Preference number: 4 (lower is better)
Translates to: GSFVTAEKHLTAPTRTHRHTEPL*KLPPAI
Trigger: GATGGCTGGAGGCAGCTTCCAGAGAGGCTCGGTGTG...GCGATGAGTGCGGGTAGGAGCCGTGAGGTGCTTCTCTGCTGTGACAAACGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425898.2
CDS-3UTR CCA 90 bp ACGGACAGACAGGGTCGTTTGTCACAGCAGAGAAGCACCTCACGGCTCCTACCCGGTAGGCACCGAGCCTaGCTCCACGACAAGCACACG +
Preference number: 4 (lower is better)
Translates to: TDRQGRLSQQRSTSRLLPGRHRA*LHDKHT
Trigger: CGTGTGCTTGTCGTGGAGCCAGGCTCGGTGCCTACC...GGGTAGGAGCCGTGAGGTGCTTCTCTGCTGTGACAAACGACCCTGTCTGTCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425898.2
3UTR CAA 72 bp GCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGCTTaGGTCTCAGGGAGCACCCTCCTACCTCGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: ALAGAPCMLFCA*VSGSTLLPRGP
Trigger: GGGACCCCGAGGTAGGAGGGTGCTCCCTGAGACCAAAGCACAAAACAGCATGCAGGGAGCTCCTGCAAGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR TCA 90 bp GTGGCACGAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGCTTCACTGTCCAGCAAGGTaGACGCGCACAGCGCAGCAT +
Preference number: 4 (lower is better)
Translates to: VARDHGHLQELPACCFVLHCPAR*TRTAQH
Trigger: ATGCTGCGCTGTGCGCGTTCACCTTGCTGGACAGTG...AAGCACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR TCA 90 bp ACTTTCATGAGCGTTCTGCTCCTACGTGGCCAGGTCCTACCTTCCCTGACGGCTGAGCACAGGAGCTGGTaGGCACCTGGATGCACAGGG +
Preference number: 4 (lower is better)
Translates to: TFMSVLLLRGQVLPSLTAEHRSW*APGCTG
Trigger: CCCTGTGCATCCAGGTGCTCACCAGCTCCTGTGCTC...AGCCGTCAGGGAAGGTAGGACCTGGCCACGTAGGAGCAGAACGCTCATGAAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR TCA 90 bp CAGGGTCGTTTGTCACAGCAGAGAAGCACCTCACGGCTCCTACCCGCACTCATCCCACCTCTCGGACGATaGGGTGAACGTTGGCGCCAT +
Preference number: 4 (lower is better)
Translates to: QGRLSQQRSTSRLLPALIPPLGR*GERWRH
Trigger: ATGGCGCCAACGTTCACCTCATCGTCCGAGAGGTGG...GATGAGTGCGGGTAGGAGCCGTGAGGTGCTTCTCTGCTGTGACAAACGACCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR TCA 90 bp GTTCAGAGCCCGCCTCGGTTGCTCCCAATCAGAATCTGCTTTGTGCTCCACGGCCCACCTCTCGGACGATaGGGTGAACGTTGGCGCCAT +
Preference number: 4 (lower is better)
Translates to: VQSPPRLLPIRICFVLHGPPLGR*GERWRH
Trigger: ATGGCGCCAACGTTCACCTCATCGTCCGAGAGGTGG...GCCGTGGAGCACAAAGCAGATTCTGATTGGGAGCAACCGAGGCGGGCTCTGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR TCA 90 bp GCGCCCTGCAAATGTCGGCCAGAGAGGAGCTTTCCACTTGAATCTCCACGGCCTCCACCTCTCGGACGATaGGGTGAACGTTGGCGCCAT +
Preference number: 4 (lower is better)
Translates to: APCKCRPERSFPLESPRPPPLGR*GERWRH
Trigger: ATGGCGCCAACGTTCACCTCATCGTCCGAGAGGTGG...AGGCCGTGGAGATTCAAGTGGAAAGCTCCTCTCTGGCCGACATTTGCAGGGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443656.6
ENST00000545865.1
CDS-3UTR TCA 90 bp CCTGTTTCTCTGGCCCTCCGGGTCCAGAATGCCCTGCACTGCCTCCTGGCCTCACTCCAAGCACTTTCATaGGCGTTCTGCTCCTACGTG +
Preference number: 4 (lower is better)
Translates to: PVSLALRVQNALHCLLASLQALS*AFCSYV
Trigger: CACGTAGGAGCAGAACGCTCATGAAAGTGCTTGGAG...TGAGGCCAGGAGGCAGTGCAGGGCATTCTGGACCCGGAGGGCCAGAGAAACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR TCA 90 bp TCCAAGCACTTTCATGAGCGTTCTGCTCCTACGTGGCCAGGTCCTACCTTCCCTAAGGCTGCCCAGCAGTaGGGAAGGCGAGTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: SKHFHERSAPTWPGPTFPKAAQQ*GRRVQG
Trigger: CCCCTGCACTCGCCTTCCTCACTGCTGGGCAGCCTT...AGGGAAGGTAGGACCTGGCCACGTAGGAGCAGAACGCTCATGAAAGTGCTTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR TCA 90 bp GGCACGAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGCTTTGGAGGCACCTAGTTGTTaGGCATTCCGGCCACAGGCC +
Preference number: 4 (lower is better)
Translates to: GTRPRALAGAPCMLFCALEAPSC*AFRPQA
Trigger: GGCCTGTGGCCGGAATGCTCAACAACTAGGTGCCTC...CAAAGCACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR TCA 90 bp TGGTGTGGCACGAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTCTGCCTCCAGCCATCTaGCCTGACCTCTCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: WCGTRPRALAGAPCMLFCLPPAI*PDLSSW
Trigger: CCAAGAGGAGAGGTCAGGTCAGATGGCTGGAGGCAG...ACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTGCCACACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425898.2
CDS-3UTR GCA 90 bp GGACAGACAGGGTCGTTTGTCACAGCAGAGAAGCACCTCACGGCTCCTACCCGCAGGACCACAGGTGACTaGAGGAGGGTGGCATCAGCT +
Preference number: 4 (lower is better)
Translates to: GQTGSFVTAEKHLTAPTRRTTGD*RRVASA
Trigger: AGCTGATGCCACCCTCCTGCAGTCACCTGTGGTCCT...GCGGGTAGGAGCCGTGAGGTGCTTCTCTGCTGTGACAAACGACCCTGTCTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR GCA 90 bp GTGAGGAAGGCGAGTGCAGGGGCTGCGGCCGCGGTCAGAGAAGGAGAGACACCAAGGCAGAAAATTCTCTaGAGCTTCTGCAGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: VRKASAGAAAAVREGETPRQKIL*SFCSLW
Trigger: CCACAGGCTGCAGAAGCTGCAGAGAATTTTCTGCCT...TGGTGTCTCTCCTTCTCTGACCGCGGCCGCAGCCCCTGCACTCGCCTTCCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR GCA 90 bp GGTGCGCCCTGCAAATGTCGGCCAGAGAGGAGCTTTCCACTTGAATCTCCACGGAGAGGTCAGAAGGGGTaGTGTGGTACACGCGGCCAC +
Preference number: 4 (lower is better)
Translates to: GAPCKCRPERSFPLESPRRGQKG*CGTRGH
Trigger: GTGGCCGCGTGTACCACAGCACCCCTTCTGACCTCT...CCGTGGAGATTCAAGTGGAAAGCTCCTCTCTGGCCGACATTTGCAGGGCGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR GCA 90 bp CACCTCTCGGACGATGAGGTGAACGTTGGCGCCATCAGGGGCCACTCCCTGGATACAGCGAGACGACACTaGAGATGTTCAGGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: HLSDDEVNVGAIRGHSLDTARRH*RCSGWL
Trigger: CAGCCAGCCTGAACATCTGCAGTGTCGTCTCGCTGT...ATCCAGGGAGTGGCCCCTGATGGCGCCAACGTTCACCTCATCGTCCGAGAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR GCA 90 bp CCTGTTTCTCTGGCCCTCCGGGTCCAGAATGCCCTGCACTGCCTCCTGGCCTCAGTTGAGGCTTGTCAGTaGCTTGTTCCGCTGGTCAAC +
Preference number: 4 (lower is better)
Translates to: PVSLALRVQNALHCLLASVEACQ*LVPLVN
Trigger: GTTGACCAGCGGAACAAGGCACTGACAAGCCTCAAC...TGAGGCCAGGAGGCAGTGCAGGGCATTCTGGACCCGGAGGGCCAGAGAAACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp GTGGCACGAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGCTTAGCACATCCTGTGTCTaGAGGCGGCTCCAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: VARDHGHLQELPACCFVLSTSCV*RRLQVV
Trigger: CACCACCTGGAGCCGCCTGCAGACACAGGATGTGCT...AAGCACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp GTTCAGAGCCCGCCTCGGTTGCTCCCAATCAGAATCTGCTTTGTGCTCCACGGCAGGCAAACACCCTCTTaGTCGGGCAGGACGTCGGAG +
Preference number: 4 (lower is better)
Translates to: VQSPPRLLPIRICFVLHGRQTPS*SGRTSE
Trigger: CTCCGACGTCCTGCCCGAGCAAGAGGGTGTTTGCCT...GCCGTGGAGCACAAAGCAGATTCTGATTGGGAGCAACCGAGGCGGGCTCTGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp TGGAAGATAGTGCTCGGGCCCTCACGACGTCCACAGCAGCATTCTCAGCAAGGACCGACAACGGCATGGTaGGCCCTGCAAATGTCGGCC +
Preference number: 4 (lower is better)
Translates to: WKIVLGPSRRPQQHSQQGPTTAW*ALQMSA
Trigger: GGCCGACATTTGCAGGGCGCACCATGCCGTTGTCGG...TCCTTGCTGAGAATGCTGCTGTGGACGTCGTGAGGGCCCGAGCACTATCTTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443656.6
ENST00000545865.1
CDS-3UTR GCA 90 bp GTGTGGCACGAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGCTCACCATCGTCTGCATaGGCCCGACAACGGCATGGT +
Preference number: 4 (lower is better)
Translates to: VWHETTGTCRSSLHAVLCSPSSA*ARQRHG
Trigger: ACCATGCCGTTGTCGGGCGCATGCAGACGATGGTGA...GCACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTGCCACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp TTGTGCTCCACGGCCTCCAAGCACTTTCATGAGCGTTCTGCTCCTACGTGGCCAGAGCCCTGGGTGGCCTaGTCTGTCACCATCGTCTGC +
Preference number: 4 (lower is better)
Translates to: LCSTASKHFHERSAPTWPEPWVA*SVTIVC
Trigger: GCAGACGATGGTGACAGAGCAGGCCACCCAGGGCTC...TGGCCACGTAGGAGCAGAACGCTCATGAAAGTGCTTGGAGGCCGTGGAGCACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp CACATCCTCGTCAGGCAGAAAATTCTCTGCAGCTTCTGCAGCCTGTGGCTCTGTTGGCCTCATCCTCCGTaGAGAGCCGGTCGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: HILVRQKILCSFCSLWLCWPHPP*RAGRAG
Trigger: CCCTGCGCGACCGGCTCTGCACGGAGGATGAGGCCA...ACAGAGCCACAGGCTGCAGAAGCTGCAGAGAATTTTCTGCCTGACGAGGATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR GCA 90 bp GTGAGGAAGGCGAGTGCAGGGGCTGCGGCCGCGGTCAGAGAAGGAGAGACACCACTGCATGCTGTTTTGTaGTTTGGTCTCAGGGAGCAC +
Preference number: 4 (lower is better)
Translates to: VRKASAGAAAAVREGETPLHAVL*FGLREH
Trigger: GTGCTCCCTGAGACCAAAGCACAAAACAGCATGCAG...TGGTGTCTCTCCTTCTCTGACCGCGGCCGCAGCCCCTGCACTCGCCTTCCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp GCTGCTCAGGGCCCAGCGGGGTGCTTCCCCGAGACAGATCCACCACACAGAGGTCTGCATGCTGTTTTGTaGTTTGGTCTCAGGGAGCAC +
Preference number: 4 (lower is better)
Translates to: AAQGPAGCFPETDPPHRGLHAVL*FGLREH
Trigger: GTGCTCCCTGAGACCAAAGCACAAAACAGCATGCAG...ACCTCTGTGTGGTGGATCTGTCTCGGGGAAGCACCCCGCTGGGCCCTGAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR GCA 90 bp GAGGACGCGAAGCTGGACCGGCCAGGTTCAGAGCCCGCCTCGGTTGCTCCCAATCAGGAGCTCCCTGCATaGTGTTTTGTGCTTTGGTCT +
Preference number: 4 (lower is better)
Translates to: EDAKLDRPGSEPASVAPNQELPA*CFVLWS
Trigger: AGACCAAAGCACAAAACAGCATGCAGGGAGCTCCTG...ATTGGGAGCAACCGAGGCGGGCTCTGAACCTGGCCGGTCCAGCTTCGCGTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp ACTTTCATGAGCGTTCTGCTCCTACGTGGCCAGGTCCTACCTTCCCTGACGGCTCACAGTGCTGGGTACTaGCCCGGCTGGAGGCACCTA +
Preference number: 4 (lower is better)
Translates to: TFMSVLLLRGQVLPSLTAHSAGY*PGWRHL
Trigger: TAGGTGCCTCCAGCCGGGGCAGTACCCAGCACTGTG...AGCCGTCAGGGAAGGTAGGACCTGGCCACGTAGGAGCAGAACGCTCATGAAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp CAGCAGAGGACGCGAAGCTGGACCGGCCAGGTTCAGAGCCCGCCTCGGTTGCTCGCCTCTTTTCTCCCTTaGAGCCTTCACAGTGAAAAC +
Preference number: 4 (lower is better)
Translates to: QQRTRSWTGQVQSPPRLLASFLP*SLHSEN
Trigger: GTTTTCACTGTGAAGGCTGCAAGGGAGAAAAGAGGC...GAGCAACCGAGGCGGGCTCTGAACCTGGCCGGTCCAGCTTCGCGTCCTCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425898.2
CDS-3UTR CCA 90 bp GGTGCGCCCTGCAAATGTCGGCCAGAGAGGAGCTTTCCACTTGAATCTCCACGGAAGACCTCTGCCTCATaGCACAGCACGCGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: GAPCKCRPERSFPLESPRKTSAS*HSTRGL
Trigger: CAAGCCCCGCGTGCTGTGCCATGAGGCAGAGGTCTT...CCGTGGAGATTCAAGTGGAAAGCTCCTCTCTGGCCGACATTTGCAGGGCGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR CCA 90 bp CACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGCTTTGGTCTCAGGGAGCACCCTCATCAGGCGGCCTTTaGCGGACAGGGCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: HLQELPACCFVLWSQGAPSSGGL*RTGPGA
Trigger: AGCTCCTGGCCCTGTCCGCCAAAGGCCGCCTGATGA...GGGTGCTCCCTGAGACCAAAGCACAAAACAGCATGCAGGGAGCTCCTGCAAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR CCA 90 bp CACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGCTTTGGTCTCAGGGAGCACCCTGCAGGAGATGGGTCTaGGGCCCGTGCCGCTTGACA +
Preference number: 4 (lower is better)
Translates to: HLQELPACCFVLWSQGAPCRRWV*GPCRLT
Trigger: TGTCAAGCGGCACGGGCCCCAGACCCATCTCCTGCA...GGGTGCTCCCTGAGACCAAAGCACAAAACAGCATGCAGGGAGCTCCTGCAAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp AAAATAGTGCACAGTGCTGGGTACTGCCCCGGCTGGAGGCACCTAGTTGTTGAGGCAGGCGGCTCCAGGTaGTGCTGGTGGTGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: KIVHSAGYCPGWRHLVVEAGGSR*CWWCRR
Trigger: TCTCCTGCACCACCAGCACCACCTGGAGCCGCCTGC...CTCAACAACTAGGTGCCTCCAGCCGGGGCAGTACCCAGCACTGTGCACTATTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp CGCCCGACAACGGCATGGTGCGCCCTGCAAATGTCGGCCAGAGAGGAGCTTTCCAAGTTTCCAGAAAAGTaGCCACAGGGTCTCGGGTGG +
Preference number: 4 (lower is better)
Translates to: RPTTAWCALQMSAREELSKFPEK*PQGLGW
Trigger: CCACCCGAGACCCTGTGGCCACTTTTCTGGAAACTT...GGAAAGCTCCTCTCTGGCCGACATTTGCAGGGCGCACCATGCCGTTGTCGGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443656.6
ENST00000545865.1
CDS-3UTR CCA 90 bp GTTCAGAGCCCGCCTCGGTTGCTCCCAATCAGAATCTGCTTTGTGCTCCACGGCGTCTCGTGGTTGGCGTaGATCTGGCGGAGGTACTGC +
Preference number: 4 (lower is better)
Translates to: VQSPPRLLPIRICFVLHGVSWLA*IWRRYC
Trigger: GCAGTACCTCCGCCAGATCCACGCCAACCACGAGAC...GCCGTGGAGCACAAAGCAGATTCTGATTGGGAGCAACCGAGGCGGGCTCTGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp ACTTTCATGAGCGTTCTGCTCCTACGTGGCCAGGTCCTACCTTCCCTGACGGCTCGGTGGCACAGGAGCTaGCCTCATCCTCCGTGCAGA +
Preference number: 4 (lower is better)
Translates to: TFMSVLLLRGQVLPSLTARWHRS*PHPPCR
Trigger: TCTGCACGGAGGATGAGGCCAGCTCCTGTGCCACCG...AGCCGTCAGGGAAGGTAGGACCTGGCCACGTAGGAGCAGAACGCTCATGAAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp GTGTGGCACGAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGCCGTTCTGCTCCTACGTaGCCAGGTCCTACCTTCCCT +
Preference number: 4 (lower is better)
Translates to: VWHETTGTCRSSLHAVLCRSAPT*PGPTFP
Trigger: AGGGAAGGTAGGACCTGGCCACGTAGGAGCAGAACG...GCACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTGCCACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp CCAAGCACTTTCATGAGCGTTCTGCTCCTACGTGGCCAGGTCCTACCTTCCCTGCAGAGGACGCGAAGCTaGACCGGCCAGGTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: PSTFMSVLLLRGQVLPSLQRTRS*TGQVQS
Trigger: GCTCTGAACCTGGCCGGTCCAGCTTCGCGTCCTCTG...CAGGGAAGGTAGGACCTGGCCACGTAGGAGCAGAACGCTCATGAAAGTGCTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp CGTTTGTCACAGCAGAGAAGCACCTCACGGCTCCTACCCGCACTCATCGCGGACAGCCGGTGCTCCTGGTaGTGTGGCAGCAACAGTTAC +
Preference number: 4 (lower is better)
Translates to: RLSQQRSTSRLLPALIADSRCSW*CGSNSY
Trigger: GTAACTGTTGCTGCCACACCACCAGGAGCACCGGCT...GTCCGCGATGAGTGCGGGTAGGAGCCGTGAGGTGCTTCTCTGCTGTGACAAACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp AGCACTTTCATGAGCGTTCTGCTCCTACGTGGCCAGGTCCTACCTTCCCTGACGGGCAGCCGGTGCTCCTaGTGGTGTGGCAGCAACAGT +
Preference number: 4 (lower is better)
Translates to: STFMSVLLLRGQVLPSLTGSRCS*WCGSNS
Trigger: ACTGTTGCTGCCACACCACCAGGAGCACCGGCTGCC...CGTCAGGGAAGGTAGGACCTGGCCACGTAGGAGCAGAACGCTCATGAAAGTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp TCCAAGCACTTTCATGAGCGTTCTGCTCCTACGTGGCCAGGTCCTACCTTCCCTACCAGCACCAGGAGGTaGGCCGTAGCCCAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: SKHFHERSAPTWPGPTFPTSTRR*AVAQAE
Trigger: CTCAGCCTGGGCTACGGCCCACCTCCTGGTGCTGGT...AGGGAAGGTAGGACCTGGCCACGTAGGAGCAGAACGCTCATGAAAGTGCTTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp GTTCAGAGCCCGCCTCGGTTGCTCCCAATCAGAATCTGCTTTGTGCTCCACGGCACGACAAGCACACGGTaGGTGTGGAGCCACGCCAGA +
Preference number: 4 (lower is better)
Translates to: VQSPPRLLPIRICFVLHGTTSTR*VWSHAR
Trigger: TCTGGCGTGGCTCCACACCCACCGTGTGCTTGTCGT...GCCGTGGAGCACAAAGCAGATTCTGATTGGGAGCAACCGAGGCGGGCTCTGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425898.2
CDS-3UTR CCA 90 bp GTGCTTCCCCGAGACAGATCCACCACACAGAGGTCAGAAGGGGTGCTGTGGTACATAATCGGGCAGGGATaGCGGCCGAGGCTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: VLPRDRSTTQRSEGVLWYIIGQG*RPRLQS
Trigger: GCTCTGAAGCCTCGGCCGCCATCCCTGCCCGATTAT...GTACCACAGCACCCCTTCTGACCTCTGTGTGGTGGATCTGTCTCGGGGAAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443656.6
3UTR CAA 72 bp TGGCCCTTCCTTGGTGTGGCACGAGACCACGGGCACTaGCAGGAGCTCCCTGCATGCTGTTTTGTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: WPFLGVARDHGH*QELPACCFVLW
Trigger: CCAAAGCACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTGCCACACCAAGGAAGGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR TCA 90 bp ACAGTGCACATCCTCGTCAGGCAGAAAATTCTCTGCAGCTTCTGCAGCCTGTGGGGCCCTGCACCAGGGTaGCCAGCACACTGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: TVHILVRQKILCSFCSLWGPAPG*PAHCPA
Trigger: TGCTGGACAGTGTGCTGGTCACCCTGGTGCAGGGCC...CCACAGGCTGCAGAAGCTGCAGAGAATTTTCTGCCTGACGAGGATGTGCACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR TCA 90 bp TCCAAGCACTTTCATGAGCGTTCTGCTCCTACGTGGCCAGGTCCTACCTTCCCTGGGCTGACCTGGAGGTaGCCAGGGCCTTCAGGATCA +
Preference number: 4 (lower is better)
Translates to: SKHFHERSAPTWPGPTFPGLTWR*PGPSGS
Trigger: TGATCCTGAAGGCCCTGGTCACCTCCAGGTCAGCCC...AGGGAAGGTAGGACCTGGCCACGTAGGAGCAGAACGCTCATGAAAGTGCTTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR TCA 90 bp TGGTGTGGCACGAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTACGGGCTCCTCCAGGTaGTGGAGGATCTTGACAAGG +
Preference number: 4 (lower is better)
Translates to: WCGTRPRALAGAPCMLFCTGSSR*WRILTR
Trigger: CCTTGTCAAGATCCTCCATCACCTGGAGGAGCCCGT...ACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTGCCACACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR TCA 90 bp GCCAGGTTCAGAGCCCGCCTCGGTTGCTCCCAATCAGAATCTGCTTTGTGCTCCACGGGCTCCTCCAGGTaGTGGAGGATCTTGACAAGG +
Preference number: 4 (lower is better)
Translates to: ARFRARLGCSQSESALCSTGSSR*WRILTR
Trigger: CCTTGTCAAGATCCTCCATCACCTGGAGGAGCCCGT...GGAGCACAAAGCAGATTCTGATTGGGAGCAACCGAGGCGGGCTCTGAACCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR TCA 90 bp GTGAGGAAGGCGAGTGCAGGGGCTGCGGCCGCGGTCAGAGAAGGAGAGACACCAAGCTCCTTTATTTTCTaGCCTGCACTCTCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: VRKASAGAAAAVREGETPSSFIF*PALSVV
Trigger: GACCACAGAGAGTGCAGGTCAGAAAATAAAGGAGCT...TGGTGTCTCTCCTTCTCTGACCGCGGCCGCAGCCCCTGCACTCGCCTTCCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR TCA 90 bp AAAATAGTGCACAGTGCTGGGTACTGCCCCGGCTGGAGGCACCTAGTTGTTGAGGCTCCGCCGACACCTTaGTGGAAGCCACAGATGGGG +
Preference number: 4 (lower is better)
Translates to: KIVHSAGYCPGWRHLVVEAPPTP*WKPQMG
Trigger: CCCCATCTGTGGCTTCCATCAAGGTGTCGGCGGAGC...CTCAACAACTAGGTGCCTCCAGCCGGGGCAGTACCCAGCACTGTGCACTATTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR TCA 90 bp GTGAGGAAGGCGAGTGCAGGGGCTGCGGCCGCGGTCAGAGAAGGAGAGACACCAAAACAGTGGGACGCATaGGGCTCTCAAGACATCTTA +
Preference number: 4 (lower is better)
Translates to: VRKASAGAAAAVREGETPKQWDA*GSQDIL
Trigger: TAAGATGTCTTGAGAGCCTCATGCGTCCCACTGTTT...TGGTGTCTCTCCTTCTCTGACCGCGGCCGCAGCCCCTGCACTCGCCTTCCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425898.2
CDS-3UTR TCA 90 bp ACGGACAGACAGGGTCGTTTGTCACAGCAGAGAAGCACCTCACGGCTCCTACCCAAAGAGGACAGAGGATaGAGCTGGTGCTCCGGGGAC +
Preference number: 4 (lower is better)
Translates to: TDRQGRLSQQRSTSRLLPKEDRG*SWCSGD
Trigger: GTCCCCGGAGCACCAGCTTCATCCTCTGTCCTCTTT...GGGTAGGAGCCGTGAGGTGCTTCTCTGCTGTGACAAACGACCCTGTCTGTCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425898.2
CDS-3UTR GCA 90 bp GAATCTGCTTTGTGCTCCACGGCCTCCAAGCACTTTCATGAGCGTTCTGCTCCTCAGGGCCCAGCGGGGTaGTTCCCCGAGACAGATCCA +
Preference number: 4 (lower is better)
Translates to: ESALCSTASKHFHERSAPQGPAG*FPETDP
Trigger: TGGATCTGTCTCGGGGAAGCACCCCGCTGGGCCCTG...AGGAGCAGAACGCTCATGAAAGTGCTTGGAGGCCGTGGAGCACAAAGCAGATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR GCA 90 bp ACAGTGCACATCCTCGTCAGGCAGAAAATTCTCTGCAGCTTCTGCAGCCTGTGGCAGGGCCCAGCGGGGTaGTTCCCCGAGACAGATCCA +
Preference number: 4 (lower is better)
Translates to: TVHILVRQKILCSFCSLWQGPAG*FPETDP
Trigger: TGGATCTGTCTCGGGGAAGCACCCCGCTGGGCCCTG...CCACAGGCTGCAGAAGCTGCAGAGAATTTTCTGCCTGACGAGGATGTGCACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR GCA 90 bp GAATCTGCTTTGTGCTCCACGGCCTCCAAGCACTTTCATGAGCGTTCTGCTCCTTGGGTCTGGGGCCCGTaGCGCTTGACAGCAGTGCAC +
Preference number: 4 (lower is better)
Translates to: ESALCSTASKHFHERSAPWVWGP*RLTAVH
Trigger: GTGCACTGCTGTCAAGCGGCACGGGCCCCAGACCCA...AGGAGCAGAACGCTCATGAAAGTGCTTGGAGGCCGTGGAGCACAAAGCAGATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp GAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGCTTTGGTCTCAGGCAAACACCCTCTTaGTCGGGCAGGACGTCGGAG +
Preference number: 4 (lower is better)
Translates to: ETTGTCRSSLHAVLCFGLRQTPS*SGRTSE
Trigger: CTCCGACGTCCTGCCCGAGCAAGAGGGTGTTTGCCT...GAGACCAAAGCACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp ACGGACAGACAGGGTCGTTTGTCACAGCAGAGAAGCACCTCACGGCTCCTACCCTGTCCACTGTGTGCCTaGTCAGGGGCAGGCAAACAC +
Preference number: 4 (lower is better)
Translates to: TDRQGRLSQQRSTSRLLPCPLCA*SGAGKH
Trigger: GTGTTTGCCTGCCCCTGAGCAGGCACACAGTGGACA...GGGTAGGAGCCGTGAGGTGCTTCTCTGCTGTGACAAACGACCCTGTCTGTCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp ACGGACAGACAGGGTCGTTTGTCACAGCAGAGAAGCACCTCACGGCTCCTACCCAGCATGTCCACTGTGTaGCTGCTCAGGGGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: TDRQGRLSQQRSTSRLLPSMSTV*LLRGRQ
Trigger: TTGCCTGCCCCTGAGCAGGCACACAGTGGACATGCT...GGGTAGGAGCCGTGAGGTGCTTCTCTGCTGTGACAAACGACCCTGTCTGTCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp GGTGCGCCCTGCAAATGTCGGCCAGAGAGGAGCTTTCCACTTGAATCTCCACGGAGCATGTCCACTGTGTaGCTGCTCAGGGGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: GAPCKCRPERSFPLESPRSMSTV*LLRGRQ
Trigger: TTGCCTGCCCCTGAGCAGGCACACAGTGGACATGCT...CCGTGGAGATTCAAGTGGAAAGCTCCTCTCTGGCCGACATTTGCAGGGCGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443656.6
ENST00000545865.1
CDS-3UTR GCA 90 bp TTCAGAGCCCGCCTCGGTTGCTCCCAATCAGAATCTGCTTTGTGCTCCACGGCCGGGAAGCGCAGACACTaGAGCATGTCCACTGTGTGC +
Preference number: 4 (lower is better)
Translates to: FRARLGCSQSESALCSTAGKRRH*SMSTVC
Trigger: GCACACAGTGGACATGCTGCAGTGTCTGCGCTTCCC...GGCCGTGGAGCACAAAGCAGATTCTGATTGGGAGCAACCGAGGCGGGCTCTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp GCGCCCTGCAAATGTCGGCCAGAGAGGAGCTTTCCACTTGAATCTCCACGGCCTGGGAAGCGCAGACACTaGAGCATGTCCACTGTGTGC +
Preference number: 4 (lower is better)
Translates to: APCKCRPERSFPLESPRPGKRRH*SMSTVC
Trigger: GCACACAGTGGACATGCTGCAGTGTCTGCGCTTCCC...AGGCCGTGGAGATTCAAGTGGAAAGCTCCTCTCTGGCCGACATTTGCAGGGCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443656.6
ENST00000545865.1
CDS-3UTR GCA 90 bp TGGTGTGGCACGAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTTCACCATCGTCTGCATaGGCCCGACAACGGCATGGT +
Preference number: 4 (lower is better)
Translates to: WCGTRPRALAGAPCMLFCSPSSA*ARQRHG
Trigger: ACCATGCCGTTGTCGGGCGCATGCAGACGATGGTGA...ACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTGCCACACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp AAAATAGTGCACAGTGCTGGGTACTGCCCCGGCTGGAGGCACCTAGTTGTTGAGGAGCCCTGGGTGGCCTaGTCTGTCACCATCGTCTGC +
Preference number: 4 (lower is better)
Translates to: KIVHSAGYCPGWRHLVVEEPWVA*SVTIVC
Trigger: GCAGACGATGGTGACAGAGCAGGCCACCCAGGGCTC...CTCAACAACTAGGTGCCTCCAGCCGGGGCAGTACCCAGCACTGTGCACTATTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp TGGTGTGGCACGAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTATCTGGCGGAGGTACTaGACACGGAGATCAGGAGCG +
Preference number: 4 (lower is better)
Translates to: WCGTRPRALAGAPCMLFCIWRRY*TRRSGA
Trigger: CGCTCCTGATCTCCGTGTGCAGTACCTCCGCCAGAT...ACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTGCCACACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp CGTTTGTCACAGCAGAGAAGCACCTCACGGCTCCTACCCGCACTCATCGCGGACAGAGCCCGCCTCGGTTaGTCCCAATCAGAATCTGCT +
Preference number: 4 (lower is better)
Translates to: RLSQQRSTSRLLPALIADRARLG*SQSESA
Trigger: AGCAGATTCTGATTGGGAGCAACCGAGGCGGGCTCT...GTCCGCGATGAGTGCGGGTAGGAGCCGTGAGGTGCTTCTCTGCTGTGACAAACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp CAGAGTGGGCAGCCGGGCAGGTGTGAACAGTGTGACAAGGGTACCGTGGGGCACCAGGAGCTCCCTGCATaGTGTTTTGTGCTTTGGTCT +
Preference number: 4 (lower is better)
Translates to: QSGQPGRCEQCDKGTVGHQELPA*CFVLWS
Trigger: AGACCAAAGCACAAAACAGCATGCAGGGAGCTCCTG...GTGCCCCACGGTACCCTTGTCACACTGTTCACACCTGCCCGGCTGCCCACTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp CACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGCTTTGGTCTCAGGGAGCACCCGAGACCACGGGCACTTaGAGGAGCTCCCTGCATGCT +
Preference number: 4 (lower is better)
Translates to: HLQELPACCFVLWSQGAPETTGT*RSSLHA
Trigger: AGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTC...GGGTGCTCCCTGAGACCAAAGCACAAAACAGCATGCAGGGAGCTCCTGCAAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp GGACAGACAGGGTCGTTTGTCACAGCAGAGAAGCACCTCACGGCTCCTACCCGCGAAAATAGTGCACAGTaGTGGGTACTGCCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: GQTGSFVTAEKHLTAPTRENSAQ*WVLPRL
Trigger: CAGCCGGGGCAGTACCCAGCACTGTGCACTATTTTC...GCGGGTAGGAGCCGTGAGGTGCTTCTCTGCTGTGACAAACGACCCTGTCTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp ACGGACAGACAGGGTCGTTTGTCACAGCAGAGAAGCACCTCACGGCTCCTACCCTCCCGAAGCCAGTGCTaGGGGAGGAAAAGCACACTG +
Preference number: 4 (lower is better)
Translates to: TDRQGRLSQQRSTSRLLPSRSQC*GRKSTL
Trigger: CAGTGTGCTTTTCCTCCCGCAGCACTGGCTTCGGGA...GGGTAGGAGCCGTGAGGTGCTTCTCTGCTGTGACAAACGACCCTGTCTGTCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425898.2
CDS-3UTR GCA 90 bp GTTCAGAGCCCGCCTCGGTTGCTCCCAATCAGAATCTGCTTTGTGCTCCACGGCACGTCCCGAAGCCAGTaGTGCGGGAGGAAAAGCACA +
Preference number: 4 (lower is better)
Translates to: VQSPPRLLPIRICFVLHGTSRSQ*CGRKST
Trigger: TGTGCTTTTCCTCCCGCAGCACTGGCTTCGGGACGT...GCCGTGGAGCACAAAGCAGATTCTGATTGGGAGCAACCGAGGCGGGCTCTGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425898.2
CDS-3UTR CCA 90 bp AGCACTTTCATGAGCGTTCTGCTCCTACGTGGCCAGGTCCTACCTTCCCTGACGAAGACCTCTGCCTCATaGCACAGCACGCGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: STFMSVLLLRGQVLPSLTKTSAS*HSTRGL
Trigger: CAAGCCCCGCGTGCTGTGCCATGAGGCAGAGGTCTT...CGTCAGGGAAGGTAGGACCTGGCCACGTAGGAGCAGAACGCTCATGAAAGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR CCA 90 bp GAATCTGCTTTGTGCTCCACGGCCTCCAAGCACTTTCATGAGCGTTCTGCTCCTTCAGAAGGGGTGCTGTaGTACACGCGGCCACCCCCG +
Preference number: 4 (lower is better)
Translates to: ESALCSTASKHFHERSAPSEGVL*YTRPPP
Trigger: CGGGGGTGGCCGCGTGTACCACAGCACCCCTTCTGA...AGGAGCAGAACGCTCATGAAAGTGCTTGGAGGCCGTGGAGCACAAAGCAGATTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR CCA 90 bp TGGCACGAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGCTTTACAGGGCCAGGAGCTTaGTGCCACCTTCATGCGTCC +
Preference number: 4 (lower is better)
Translates to: WHETTGTCRSSLHAVLCFTGPGA*CHLHAS
Trigger: GGACGCATGAAGGTGGCACCAAGCTCCTGGCCCTGT...AAAGCACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR CCA 90 bp GTTCAGAGCCCGCCTCGGTTGCTCCCAATCAGAATCTGCTTTGTGCTCCACGGCTGTGGTCATCCTGGCTaGGCCAGGCATCTCAGAGTC +
Preference number: 4 (lower is better)
Translates to: VQSPPRLLPIRICFVLHGCGHPG*ARHLRV
Trigger: GACTCTGAGATGCCTGGCCCAGCCAGGATGACCACA...GCCGTGGAGCACAAAGCAGATTCTGATTGGGAGCAACCGAGGCGGGCTCTGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR CCA 90 bp CTCCTACCTCGGGGTCCCAGAGTGGGCAGCCGGGCAGGTGTGAACAGTGTGACAAGTGCCTTGTTCCGCTaGTCAACCGCCTTCTTTAGA +
Preference number: 4 (lower is better)
Translates to: LLPRGPRVGSRAGVNSVTSALFR*STAFFR
Trigger: TCTAAAGAAGGCGGTTGACCAGCGGAACAAGGCACT...TGTCACACTGTTCACACCTGCCCGGCTGCCCACTCTGGGACCCCGAGGTAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp GCTGCCTCCCTCCCCGGGTGCCCGCACTGTGAAGCTCACAGTTTGCTCCTTTGTAAGTTTCCAGAAAAGTaGCCACAGGGTCTCGGGTGG +
Preference number: 4 (lower is better)
Translates to: AASLPGCPHCEAHSLLLCKFPEK*PQGLGW
Trigger: CCACCCGAGACCCTGTGGCCACTTTTCTGGAAACTT...ACAAAGGAGCAAACTGTGAGCTTCACAGTGCGGGCACCCGGGGAGGGAGGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545865.1
CDS-3UTR CCA 90 bp TCCAAGCACTTTCATGAGCGTTCTGCTCCTACGTGGCCAGGTCCTACCTTCCCTGATGGAAGCCACAGATaGGGGCAGGTACTCGGCCCG +
Preference number: 4 (lower is better)
Translates to: SKHFHERSAPTWPGPTFPDGSHR*GQVLGP
Trigger: CGGGCCGAGTACCTGCCCCCATCTGTGGCTTCCATC...AGGGAAGGTAGGACCTGGCCACGTAGGAGCAGAACGCTCATGAAAGTGCTTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp TTGTGCTCCACGGCCTCCAAGCACTTTCATGAGCGTTCTGCTCCTACGTGGCCATGGTTGGCGTGGATCTaGCGGAGGTACTGCACACGG +
Preference number: 4 (lower is better)
Translates to: LCSTASKHFHERSAPTWPWLAWI*RRYCTR
Trigger: CCGTGTGCAGTACCTCCGCCAGATCCACGCCAACCA...TGGCCACGTAGGAGCAGAACGCTCATGAAAGTGCTTGGAGGCCGTGGAGCACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp CACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGCTTTGGTCTCAGGGAGCACCCGTCTCGTGGTTGGCGTaGATCTGGCGGAGGTACTGC +
Preference number: 4 (lower is better)
Translates to: HLQELPACCFVLWSQGAPVSWLA*IWRRYC
Trigger: GCAGTACCTCCGCCAGATCCACGCCAACCACGAGAC...GGGTGCTCCCTGAGACCAAAGCACAAAACAGCATGCAGGGAGCTCCTGCAAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp AGCACTTTCATGAGCGTTCTGCTCCTACGTGGCCAGGTCCTACCTTCCCTGACGGCAGTGTCTCGTGGTTaGCGTGGATCTGGCGGAGGT +
Preference number: 4 (lower is better)
Translates to: STFMSVLLLRGQVLPSLTAVSRG*RGSGGG
Trigger: ACCTCCGCCAGATCCACGCCAACCACGAGACACTGC...CGTCAGGGAAGGTAGGACCTGGCCACGTAGGAGCAGAACGCTCATGAAAGTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp ACGGACAGACAGGGTCGTTTGTCACAGCAGAGAAGCACCTCACGGCTCCTACCCCGTTCTGCTCCTACGTaGCCAGGTCCTACCTTCCCT +
Preference number: 4 (lower is better)
Translates to: TDRQGRLSQQRSTSRLLPRSAPT*PGPTFP
Trigger: AGGGAAGGTAGGACCTGGCCACGTAGGAGCAGAACG...GGGTAGGAGCCGTGAGGTGCTTCTCTGCTGTGACAAACGACCCTGTCTGTCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp CTCCTACCTCGGGGTCCCAGAGTGGGCAGCCGGGCAGGTGTGAACAGTGTGACAGTGCTCCTGGTGGTGTaGCAGCAACAGTTACAAACT +
Preference number: 4 (lower is better)
Translates to: LLPRGPRVGSRAGVNSVTVLLVV*QQQLQT
Trigger: AGTTTGTAACTGTTGCTGCCACACCACCAGGAGCAC...TGTCACACTGTTCACACCTGCCCGGCTGCCCACTCTGGGACCCCGAGGTAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR TCA 90 bp GTTCAGAGCCCGCCTCGGTTGCTCCCAATCAGAATCTGCTTTGTGCTCCACGGCCGTTCATGGCCTCGTTaGGGCTTGTCAGTGCCTTGT +
Preference number: 4 (lower is better)
Translates to: VQSPPRLLPIRICFVLHGRSWPR*GLSVPC
Trigger: ACAAGGCACTGACAAGCCTCAACGAGGCCATGAACG...GCCGTGGAGCACAAAGCAGATTCTGATTGGGAGCAACCGAGGCGGGCTCTGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR TCA 90 bp TGGCACGAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGCTTTACCCCTGGTCCAGGCTaGAGCTGCTGCTGTTCTCTA +
Preference number: 4 (lower is better)
Translates to: WHETTGTCRSSLHAVLCFTPGPG*SCCCSL
Trigger: TAGAGAACAGCAGCAGCTTCAGCCTGGACCAGGGGT...AAAGCACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR TCA 90 bp GGTGTGGCACGAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGCTCCAAGCACTTTCATaGGCGTTCTGCTCCTACGTG +
Preference number: 4 (lower is better)
Translates to: GVARDHGHLQELPACCFVLQALS*AFCSYV
Trigger: CACGTAGGAGCAGAACGCTCATGAAAGTGCTTGGAG...CACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTGCCACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR TCA 90 bp TCCAAGCACTTTCATGAGCGTTCTGCTCCTACGTGGCCAGGTCCTACCTTCCCTGAGGCACCTAGTTGTTaGGCATTCCGGCCACAGGCC +
Preference number: 4 (lower is better)
Translates to: SKHFHERSAPTWPGPTFPEAPSC*AFRPQA
Trigger: GGCCTGTGGCCGGAATGCTCAACAACTAGGTGCCTC...AGGGAAGGTAGGACCTGGCCACGTAGGAGCAGAACGCTCATGAAAGTGCTTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR TCA 90 bp ACGGACAGACAGGGTCGTTTGTCACAGCAGAGAAGCACCTCACGGCTCCTACCCTCAGTGTGTTCTCTCTaGACGTCCCGAAGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: TDRQGRLSQQRSTSRLLPSVCSL*TSRSQC
Trigger: GCACTGGCTTCGGGACGTTCAGAGAGAACACACTGA...GGGTAGGAGCCGTGAGGTGCTTCTCTGCTGTGACAAACGACCCTGTCTGTCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425898.2
CDS-3UTR GCA 90 bp TCCAAGCACTTTCATGAGCGTTCTGCTCCTACGTGGCCAGGTCCTACCTTCCCTGGACAGGAAGACCTCTaGCTCATGGCACAGCACGCG +
Preference number: 4 (lower is better)
Translates to: SKHFHERSAPTWPGPTFPGQEDL*LMAQHA
Trigger: CGCGTGCTGTGCCATGAGGCAGAGGTCTTCCTGTCC...AGGGAAGGTAGGACCTGGCCACGTAGGAGCAGAACGCTCATGAAAGTGCTTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR GCA 90 bp AAAATAGTGCACAGTGCTGGGTACTGCCCCGGCTGGAGGCACCTAGTTGTTGAGCAGCATCGGGAAGGATaGAGGCATCGGGGTCCACAG +
Preference number: 4 (lower is better)
Translates to: KIVHSAGYCPGWRHLVVEQHREG*RHRGPQ
Trigger: CTGTGGACCCCGATGCCTGCATCCTTCCCGATGCTG...CTCAACAACTAGGTGCCTCCAGCCGGGGCAGTACCCAGCACTGTGCACTATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR GCA 90 bp AGACACTGCAGCATGTCCACTGTGTGCCTGCTCAGGGGCAGGCAAACACCCTCTTCCCCAGGACAGGGCTaGTCAAACAGCTGCATCTTC +
Preference number: 4 (lower is better)
Translates to: RHCSMSTVCLLRGRQTPSSPGQG*SNSCIF
Trigger: GAAGATGCAGCTGTTTGAGCAGCCCTGTCCTGGGGA...AGAGGGTGTTTGCCTGCCCCTGAGCAGGCACACAGTGGACATGCTGCAGTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR GCA 90 bp TGGGAGACGCGGACAGCGAGACGACACTGCAGATGTTCAGGCTGGCTGGGCACAAGGCAGAAAATTCTCTaGAGCTTCTGCAGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: WETRTARRHCRCSGWLGTRQKIL*SFCSLW
Trigger: CCACAGGCTGCAGAAGCTGCAGAGAATTTTCTGCCT...TGTGCCCAGCCAGCCTGAACATCTGCAGTGTCGTCTCGCTGTCCGCGTCTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR GCA 90 bp TTCAGAGCCCGCCTCGGTTGCTCCCAATCAGAATCTGCTTTGTGCTCCACGGCCACAGCGAGACGACACTaGAGATGTTCAGGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: FRARLGCSQSESALCSTATARRH*RCSGWL
Trigger: CAGCCAGCCTGAACATCTGCAGTGTCGTCTCGCTGT...GGCCGTGGAGCACAAAGCAGATTCTGATTGGGAGCAACCGAGGCGGGCTCTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR GCA 90 bp CGCCCGACAACGGCATGGTGCGCCCTGCAAATGTCGGCCAGAGAGGAGCTTTCCCTCTCTCAGAGATGTTaGCAATTCCAGACAGCAGCT +
Preference number: 4 (lower is better)
Translates to: RPTTAWCALQMSAREELSLSQRC*QFQTAA
Trigger: AGCTGCTGTCTGGAATTGGCAACATCTCTGAGAGAG...GGAAAGCTCCTCTCTGGCCGACATTTGCAGGGCGCACCATGCCGTTGTCGGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR GCA 90 bp AGCACTTTCATGAGCGTTCTGCTCCTACGTGGCCAGGTCCTACCTTCCCTGACGTGTCCACTGTGTGCCTaGTCAGGGGCAGGCAAACAC +
Preference number: 4 (lower is better)
Translates to: STFMSVLLLRGQVLPSLTCPLCA*SGAGKH
Trigger: GTGTTTGCCTGCCCCTGAGCAGGCACACAGTGGACA...CGTCAGGGAAGGTAGGACCTGGCCACGTAGGAGCAGAACGCTCATGAAAGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp GGATGGAAGATAGTGCTCGGGCCCTCACGACGTCCACAGCAGCATTCTCAGCAAAGCATGTCCACTGTGTaGCTGCTCAGGGGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: GWKIVLGPSRRPQQHSQQSMSTV*LLRGRQ
Trigger: TTGCCTGCCCCTGAGCAGGCACACAGTGGACATGCT...TTGCTGAGAATGCTGCTGTGGACGTCGTGAGGGCCCGAGCACTATCTTCCATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443656.6
ENST00000545865.1
CDS-3UTR GCA 90 bp AGCACTTTCATGAGCGTTCTGCTCCTACGTGGCCAGGTCCTACCTTCCCTGACGTCACCATCGTCTGCATaGGCCCGACAACGGCATGGT +
Preference number: 4 (lower is better)
Translates to: STFMSVLLLRGQVLPSLTSPSSA*ARQRHG
Trigger: ACCATGCCGTTGTCGGGCGCATGCAGACGATGGTGA...CGTCAGGGAAGGTAGGACCTGGCCACGTAGGAGCAGAACGCTCATGAAAGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp GTGTGGCACGAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGCTCAGAATCTGCTTTGTaGTCCACGGCCTCCAAGCAC +
Preference number: 4 (lower is better)
Translates to: VWHETTGTCRSSLHAVLCSESAL*STASKH
Trigger: GTGCTTGGAGGCCGTGGAGCACAAAGCAGATTCTGA...GCACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTGCCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp CGTTTGTCACAGCAGAGAAGCACCTCACGGCTCCTACCCGCACTCATCGCGGACTCAGAATCTGCTTTGTaGTCCACGGCCTCCAAGCAC +
Preference number: 4 (lower is better)
Translates to: RLSQQRSTSRLLPALIADSESAL*STASKH
Trigger: GTGCTTGGAGGCCGTGGAGCACAAAGCAGATTCTGA...GTCCGCGATGAGTGCGGGTAGGAGCCGTGAGGTGCTTCTCTGCTGTGACAAACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp TTCAGAGCCCGCCTCGGTTGCTCCCAATCAGAATCTGCTTTGTGCTCCACGGCCAGAGCCCGCCTCGGTTaGTCCCAATCAGAATCTGCT +
Preference number: 4 (lower is better)
Translates to: FRARLGCSQSESALCSTARARLG*SQSESA
Trigger: AGCAGATTCTGATTGGGAGCAACCGAGGCGGGCTCT...GGCCGTGGAGCACAAAGCAGATTCTGATTGGGAGCAACCGAGGCGGGCTCTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp TGGTGTGGCACGAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTAGAGCCCGCCTCGGTTaGTCCCAATCAGAATCTGCT +
Preference number: 4 (lower is better)
Translates to: WCGTRPRALAGAPCMLFCRARLG*SQSESA
Trigger: AGCAGATTCTGATTGGGAGCAACCGAGGCGGGCTCT...ACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTGCCACACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp GCGCCCTGCAAATGTCGGCCAGAGAGGAGCTTTCCACTTGAATCTCCACGGCCTGTGACTGCAGGAGGGTaGCATCAGCTCCAAAGAGGA +
Preference number: 4 (lower is better)
Translates to: APCKCRPERSFPLESPRPVTAGG*HQLQRG
Trigger: TCCTCTTTGGAGCTGATGCCACCCTCCTGCAGTCAC...AGGCCGTGGAGATTCAAGTGGAAAGCTCCTCTCTGGCCGACATTTGCAGGGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR CCA 90 bp GTTACAAACTCACCCCAAGTCCAAACCCCAGAAATCCTGTTTCTCTGGCCCTCCGGAGATCAGGAGCGCTaGAGCCCTGGGTGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: VTNSPQVQTPEILFLWPSGDQER*SPGWPA
Trigger: AGCAGGCCACCCAGGGCTCCAGCGCTCCTGATCTCC...GGAGGGCCAGAGAAACAGGATTTCTGGGGTTTGGACTTGGGGTGAGTTTGTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp TGGCACGAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGCTTTAGCCGGTGCTCCTGGTaGTGTGGCAGCAACAGTTAC +
Preference number: 4 (lower is better)
Translates to: WHETTGTCRSSLHAVLCFSRCSW*CGSNSY
Trigger: GTAACTGTTGCTGCCACACCACCAGGAGCACCGGCT...AAAGCACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR TCA 90 bp AGACACTGCAGCATGTCCACTGTGTGCCTGCTCAGGGGCAGGCAAACACCCTCTGGTGATGGAGGATCTTaGCAAGGGCATTTGGGTCAC +
Preference number: 4 (lower is better)
Translates to: RHCSMSTVCLLRGRQTPSGDGGS*QGHLGH
Trigger: GTGACCCAAATGCCCTTGTCAAGATCCTCCATCACC...AGAGGGTGTTTGCCTGCCCCTGAGCAGGCACACAGTGGACATGCTGCAGTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR GCA 90 bp AAAATAGTGCACAGTGCTGGGTACTGCCCCGGCTGGAGGCACCTAGTTGTTGAGGGCTGCTCAAACAGCTaGATCTTCCATCGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: KIVHSAGYCPGWRHLVVEGCSNS*IFHRAG
Trigger: CCCTGCCCGATGGAAGATGCAGCTGTTTGAGCAGCC...CTCAACAACTAGGTGCCTCCAGCCGGGGCAGTACCCAGCACTGTGCACTATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR GCA 90 bp GTGAGGAAGGCGAGTGCAGGGGCTGCGGCCGCGGTCAGAGAAGGAGAGACACCACTTTATTTTCTGACCTaGACTCTCTGTGGTCATCCT +
Preference number: 4 (lower is better)
Translates to: VRKASAGAAAAVREGETPLYFLT*TLCGHP
Trigger: AGGATGACCACAGAGAGTGCAGGTCAGAAAATAAAG...TGGTGTCTCTCCTTCTCTGACCGCGGCCGCAGCCCCTGCACTCGCCTTCCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR GCA 90 bp TTCAGAGCCCGCCTCGGTTGCTCCCAATCAGAATCTGCTTTGTGCTCCACGGCCGTTGAGGCTTGTCAGTaGCTTGTTCCGCTGGTCAAC +
Preference number: 4 (lower is better)
Translates to: FRARLGCSQSESALCSTAVEACQ*LVPLVN
Trigger: GTTGACCAGCGGAACAAGGCACTGACAAGCCTCAAC...GGCCGTGGAGCACAAAGCAGATTCTGATTGGGAGCAACCGAGGCGGGCTCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp AAAATAGTGCACAGTGCTGGGTACTGCCCCGGCTGGAGGCACCTAGTTGTTGAGTGTCCACTGTGTGCCTaGTCAGGGGCAGGCAAACAC +
Preference number: 4 (lower is better)
Translates to: KIVHSAGYCPGWRHLVVECPLCA*SGAGKH
Trigger: GTGTTTGCCTGCCCCTGAGCAGGCACACAGTGGACA...CTCAACAACTAGGTGCCTCCAGCCGGGGCAGTACCCAGCACTGTGCACTATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp GCCAGGTTCAGAGCCCGCCTCGGTTGCTCCCAATCAGAATCTGCTTTGTGCTCCTCAGAATCTGCTTTGTaGTCCACGGCCTCCAAGCAC +
Preference number: 4 (lower is better)
Translates to: ARFRARLGCSQSESALCSSESAL*STASKH
Trigger: GTGCTTGGAGGCCGTGGAGCACAAAGCAGATTCTGA...GGAGCACAAAGCAGATTCTGATTGGGAGCAACCGAGGCGGGCTCTGAACCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp GAATCTGCTTTGTGCTCCACGGCCTCCAAGCACTTTCATGAGCGTTCTGCTCCTGAGACCACGGGCACTTaGAGGAGCTCCCTGCATGCT +
Preference number: 4 (lower is better)
Translates to: ESALCSTASKHFHERSAPETTGT*RSSLHA
Trigger: AGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTC...AGGAGCAGAACGCTCATGAAAGTGCTTGGAGGCCGTGGAGCACAAAGCAGATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp GGGGCCACTCCCTGGATGGAAGATAGTGCTCGGGCCCTCACGACGTCCACAGCAGTGAAGCTCACAGTTTaGTCCTTTGTGACTCTTCTG +
Preference number: 4 (lower is better)
Translates to: GATPWMEDSARALTTSTAVKLTV*SFVTLL
Trigger: CAGAAGAGTCACAAAGGAGCAAACTGTGAGCTTCAC...TGCTGTGGACGTCGTGAGGGCCCGAGCACTATCTTCCATCCAGGGAGTGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545865.1
CDS-3UTR CCA 90 bp AGCACTTTCATGAGCGTTCTGCTCCTACGTGGCCAGGTCCTACCTTCCCTGACGATCACACAGCAGAGCTaGCCATCAGGGAGACCACAG +
Preference number: 4 (lower is better)
Translates to: STFMSVLLLRGQVLPSLTITQQS*PSGRPQ
Trigger: CTGTGGTCTCCCTGATGGCCAGCTCTGCTGTGTGAT...CGTCAGGGAAGGTAGGACCTGGCCACGTAGGAGCAGAACGCTCATGAAAGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR CCA 90 bp AAAATAGTGCACAGTGCTGGGTACTGCCCCGGCTGGAGGCACCTAGTTGTTGAGTCAGGGGCCACTCCCTaGATGGAAGATAGTGCTCGG +
Preference number: 4 (lower is better)
Translates to: KIVHSAGYCPGWRHLVVESGATP*MEDSAR
Trigger: CCGAGCACTATCTTCCATCCAGGGAGTGGCCCCTGA...CTCAACAACTAGGTGCCTCCAGCCGGGGCAGTACCCAGCACTGTGCACTATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp CGTTTGTCACAGCAGAGAAGCACCTCACGGCTCCTACCCGCACTCATCGCGGACGTGCTCCTGGTGGTGTaGCAGCAACAGTTACAAACT +
Preference number: 4 (lower is better)
Translates to: RLSQQRSTSRLLPALIADVLLVV*QQQLQT
Trigger: AGTTTGTAACTGTTGCTGCCACACCACCAGGAGCAC...GTCCGCGATGAGTGCGGGTAGGAGCCGTGAGGTGCTTCTCTGCTGTGACAAACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp GCCAGGTTCAGAGCCCGCCTCGGTTGCTCCCAATCAGAATCTGCTTTGTGCTCCTGCTGTTTTGTGCTTTaGTCTCAGGGAGCACCCTCC +
Preference number: 4 (lower is better)
Translates to: ARFRARLGCSQSESALCSCCFVL*SQGAPS
Trigger: GGAGGGTGCTCCCTGAGACCAAAGCACAAAACAGCA...GGAGCACAAAGCAGATTCTGATTGGGAGCAACCGAGGCGGGCTCTGAACCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp TGGTGTGGCACGAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGCATTACCCCACCCTTaGCTCCCCAGAATGTTCCTA +
Preference number: 4 (lower is better)
Translates to: WCGTRPRALAGAPCMLFCALPHP*LPRMFL
Trigger: TAGGAACATTCTGGGGAGCCAAGGGTGGGGTAATGC...ACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTGCCACACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425898.2
CDS-3UTR CCA 90 bp CGCCCGACAACGGCATGGTGCGCCCTGCAAATGTCGGCCAGAGAGGAGCTTTCCAAAAACATAACTGAGTaGCCGTCCTTCAAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: RPTTAWCALQMSAREELSKNITE*PSFKAA
Trigger: AGCTGCCTTGAAGGACGGCCACTCAGTTATGTTTTT...GGAAAGCTCCTCTCTGGCCGACATTTGCAGGGCGCACCATGCCGTTGTCGGGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545865.1
3UTR CAA 72 bp CTTGACAGCAGTGCACAGCTCACGTTCATGGCCTCGTaGAGGCTTGTCAGTGCCTTGTTCCGCTGGTCAACC +
Preference number: 4 (lower is better)
Translates to: LDSSAQLTFMAS*RLVSALFRWST
Trigger: GGTTGACCAGCGGAACAAGGCACTGACAAGCCTCAACGAGGCCATGAACGTGAGCTGTGCACTGCTGTCAAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR TCA 90 bp CAACAGTTACAAACTCACCCCAAGTCCAAACCCCAGAAATCCTGTTTCTCTGGCAAGGCTGCCCAGCAGTaGGGAAGGCGAGTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: QQLQTHPKSKPQKSCFSGKAAQQ*GRRVQG
Trigger: CCCCTGCACTCGCCTTCCTCACTGCTGGGCAGCCTT...GCCAGAGAAACAGGATTTCTGGGGTTTGGACTTGGGGTGAGTTTGTAACTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR TCA 90 bp GTTACAAACTCACCCCAAGTCCAAACCCCAGAAATCCTGTTTCTCTGGCCCTCCCCAGGTGCCACATCTTaGCTCAGGCCTGGTAGGCAC +
Preference number: 4 (lower is better)
Translates to: VTNSPQVQTPEILFLWPSPGATS*LRPGRH
Trigger: GTGCCTACCAGGCCTGAGTCAAGATGTGGCACCTGG...GGAGGGCCAGAGAAACAGGATTTCTGGGGTTTGGACTTGGGGTGAGTTTGTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425898.2
CDS-3UTR GCA 90 bp AAAATAGTGCACAGTGCTGGGTACTGCCCCGGCTGGAGGCACCTAGTTGTTGAGTCCCCAGGACAGGGCTaGTCAAACAGCTGCATCTTC +
Preference number: 4 (lower is better)
Translates to: KIVHSAGYCPGWRHLVVESPGQG*SNSCIF
Trigger: GAAGATGCAGCTGTTTGAGCAGCCCTGTCCTGGGGA...CTCAACAACTAGGTGCCTCCAGCCGGGGCAGTACCCAGCACTGTGCACTATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR GCA 90 bp ACTTTCATGAGCGTTCTGCTCCTACGTGGCCAGGTCCTACCTTCCCTGACGGCTCTCCCAATCAGAATCTaGTTTGTGCTCCACGGCCTC +
Preference number: 4 (lower is better)
Translates to: TFMSVLLLRGQVLPSLTALPIRI*FVLHGL
Trigger: GAGGCCGTGGAGCACAAAGCAGATTCTGATTGGGAG...AGCCGTCAGGGAAGGTAGGACCTGGCCACGTAGGAGCAGAACGCTCATGAAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp TGGCACGAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGCTTTCTCCCAATCAGAATCTaGTTTGTGCTCCACGGCCTC +
Preference number: 4 (lower is better)
Translates to: WHETTGTCRSSLHAVLCFLPIRI*FVLHGL
Trigger: GAGGCCGTGGAGCACAAAGCAGATTCTGATTGGGAG...AAAGCACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp GGCACGAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGCTTTGCTTGCAGGAGCTCCCTaGATGCTGTTTTGTGCTTTG +
Preference number: 4 (lower is better)
Translates to: GTRPRALAGAPCMLFCALLAGAP*MLFCAL
Trigger: CAAAGCACAAAACAGCATGCAGGGAGCTCCTGCAAG...CAAAGCACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp GTTACAAACTCACCCCAAGTCCAAACCCCAGAAATCCTGTTTCTCTGGCCCTCCGGGTACTGCCCCGGCTaGAGGCACCTAGTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: VTNSPQVQTPEILFLWPSGYCPG*RHLVVE
Trigger: CTCAACAACTAGGTGCCTCCAGCCGGGGCAGTACCC...GGAGGGCCAGAGAAACAGGATTTCTGGGGTTTGGACTTGGGGTGAGTTTGTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR TCA 90 bp GTGGCACGAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGCTTAGCTCCTTTATTTTCTaGCCTGCACTCTCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: VARDHGHLQELPACCFVLSSFIF*PALSVV
Trigger: GACCACAGAGAGTGCAGGTCAGAAAATAAAGGAGCT...AAGCACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR TCA 90 bp CACATCCTCGTCAGGCAGAAAATTCTCTGCAGCTTCTGCAGCCTGTGGCTCTGTCGTTCATGGCCTCGTTaGGGCTTGTCAGTGCCTTGT +
Preference number: 4 (lower is better)
Translates to: HILVRQKILCSFCSLWLCRSWPR*GLSVPC
Trigger: ACAAGGCACTGACAAGCCTCAACGAGGCCATGAACG...ACAGAGCCACAGGCTGCAGAAGCTGCAGAGAATTTTCTGCCTGACGAGGATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR GCA 90 bp CAACAGTTACAAACTCACCCCAAGTCCAAACCCCAGAAATCCTGTTTCTCTGGCGGGCCAGGAGCTTGGTaGCACCTTCATGCGTCCTGG +
Preference number: 4 (lower is better)
Translates to: QQLQTHPKSKPQKSCFSGGPGAW*HLHASW
Trigger: CCAGGACGCATGAAGGTGGCACCAAGCTCCTGGCCC...GCCAGAGAAACAGGATTTCTGGGGTTTGGACTTGGGGTGAGTTTGTAACTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR GCA 90 bp TGGTGTGGCACGAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTCTCTCTCAGAGATGTTaGCAATTCCAGACAGCAGCT +
Preference number: 4 (lower is better)
Translates to: WCGTRPRALAGAPCMLFCLSQRC*QFQTAA
Trigger: AGCTGCTGTCTGGAATTGGCAACATCTCTGAGAGAG...ACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTGCCACACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR GCA 90 bp CACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGCTTTGGTCTCAGGGAGCACCCCTTGCAGGAGCTCCCTaGATGCTGTTTTGTGCTTTG +
Preference number: 4 (lower is better)
Translates to: HLQELPACCFVLWSQGAPLAGAP*MLFCAL
Trigger: CAAAGCACAAAACAGCATGCAGGGAGCTCCTGCAAG...GGGTGCTCCCTGAGACCAAAGCACAAAACAGCATGCAGGGAGCTCCTGCAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp AAAATAGTGCACAGTGCTGGGTACTGCCCCGGCTGGAGGCACCTAGTTGTTGAGAAGTTTCCAGAAAAGTaGCCACAGGGTCTCGGGTGG +
Preference number: 4 (lower is better)
Translates to: KIVHSAGYCPGWRHLVVEKFPEK*PQGLGW
Trigger: CCACCCGAGACCCTGTGGCCACTTTTCTGGAAACTT...CTCAACAACTAGGTGCCTCCAGCCGGGGCAGTACCCAGCACTGTGCACTATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp CCAAGCACTTTCATGAGCGTTCTGCTCCTACGTGGCCAGGTCCTACCTTCCCTGGTGCTCCTGGTGGTGTaGCAGCAACAGTTACAAACT +
Preference number: 4 (lower is better)
Translates to: PSTFMSVLLLRGQVLPSLVLLVV*QQQLQT
Trigger: AGTTTGTAACTGTTGCTGCCACACCACCAGGAGCAC...CAGGGAAGGTAGGACCTGGCCACGTAGGAGCAGAACGCTCATGAAAGTGCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR TCA 90 bp GCAACAGTTACAAACTCACCCCAAGTCCAAACCCCAGAAATCCTGTTTCTCTGGTCTCGGACGATGAGGTaGACGTTGGCGCCATCAGGG +
Preference number: 4 (lower is better)
Translates to: ATVTNSPQVQTPEILFLWSRTMR*TLAPSG
Trigger: CCCTGATGGCGCCAACGTTCACCTCATCGTCCGAGA...CCAGAGAAACAGGATTTCTGGGGTTTGGACTTGGGGTGAGTTTGTAACTGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp CAACAGTTACAAACTCACCCCAAGTCCAAACCCCAGAAATCCTGTTTCTCTGGCGGACAGGAAGACCTCTaGCTCATGGCACAGCACGCG +
Preference number: 4 (lower is better)
Translates to: QQLQTHPKSKPQKSCFSGGQEDL*LMAQHA
Trigger: CGCGTGCTGTGCCATGAGGCAGAGGTCTTCCTGTCC...GCCAGAGAAACAGGATTTCTGGGGTTTGGACTTGGGGTGAGTTTGTAACTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR CCA 90 bp CAACAGTTACAAACTCACCCCAAGTCCAAACCCCAGAAATCCTGTTTCTCTGGCACAGGGCCAGGAGCTTaGTGCCACCTTCATGCGTCC +
Preference number: 4 (lower is better)
Translates to: QQLQTHPKSKPQKSCFSGTGPGA*CHLHAS
Trigger: GGACGCATGAAGGTGGCACCAAGCTCCTGGCCCTGT...GCCAGAGAAACAGGATTTCTGGGGTTTGGACTTGGGGTGAGTTTGTAACTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR CCA 90 bp GAATCTGCTTTGTGCTCCACGGCCTCCAAGCACTTTCATGAGCGTTCTGCTCCTAAGTTTCCAGAAAAGTaGCCACAGGGTCTCGGGTGG +
Preference number: 4 (lower is better)
Translates to: ESALCSTASKHFHERSAPKFPEK*PQGLGW
Trigger: CCACCCGAGACCCTGTGGCCACTTTTCTGGAAACTT...AGGAGCAGAACGCTCATGAAAGTGCTTGGAGGCCGTGGAGCACAAAGCAGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CCA 90 bp GCAACAGTTACAAACTCACCCCAAGTCCAAACCCCAGAAATCCTGTTTCTCTGGCTCTCGGGACCCCAGTaGTTATGTGAGGGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: ATVTNSPQVQTPEILFLWLSGPQ*LCEGSR
Trigger: CCTGCTCCCCTCACATAACCACTGGGGTCCCGAGAG...CCAGAGAAACAGGATTTCTGGGGTTTGGACTTGGGGTGAGTTTGTAACTGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000425898.2
3UTR CAA 72 bp CTCACGTTCATGGCCTCGTTGAGGCTTGTCAGTGCCTaGTTCCGCTGGTCAACCGCCTTCTTTAGAAAAGAC +
Preference number: 4 (lower is better)
Translates to: LTFMASLRLVSA*FRWSTAFFRKD
Trigger: GTCTTTTCTAAAGAAGGCGGTTGACCAGCGGAACAAGGCACTGACAAGCCTCAACGAGGCCATGAACGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR GCA 90 bp CAACAGTTACAAACTCACCCCAAGTCCAAACCCCAGAAATCCTGTTTCTCTGGCACCCACAGCACCAGGTaGCACATCTTGACTCAGGCC +
Preference number: 4 (lower is better)
Translates to: QQLQTHPKSKPQKSCFSGTHSTR*HILTQA
Trigger: GGCCTGAGTCAAGATGTGGCACCTGGTGCTGTGGGT...GCCAGAGAAACAGGATTTCTGGGGTTTGGACTTGGGGTGAGTTTGTAACTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425898.2
CDS-3UTR CCA 90 bp CAACAGTTACAAACTCACCCCAAGTCCAAACCCCAGAAATCCTGTTTCTCTGGCATCACACAGCAGAGCTaGCCATCAGGGAGACCACAG +
Preference number: 4 (lower is better)
Translates to: QQLQTHPKSKPQKSCFSGITQQS*PSGRPQ
Trigger: CTGTGGTCTCCCTGATGGCCAGCTCTGCTGTGTGAT...GCCAGAGAAACAGGATTTCTGGGGTTTGGACTTGGGGTGAGTTTGTAACTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR TCA 90 bp GCAACAGTTACAAACTCACCCCAAGTCCAAACCCCAGAAATCCTGTTTCTCTGGGGTGATGGAGGATCTTaGCAAGGGCATTTGGGTCAC +
Preference number: 4 (lower is better)
Translates to: ATVTNSPQVQTPEILFLWGDGGS*QGHLGH
Trigger: GTGACCCAAATGCCCTTGTCAAGATCCTCCATCACC...CCAGAGAAACAGGATTTCTGGGGTTTGGACTTGGGGTGAGTTTGTAACTGTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR TCA 90 bp GCAACAGTTACAAACTCACCCCAAGTCCAAACCCCAGAAATCCTGTTTCTCTGGCTCCAAGCACTTTCATaGGCGTTCTGCTCCTACGTG +
Preference number: 4 (lower is better)
Translates to: ATVTNSPQVQTPEILFLWLQALS*AFCSYV
Trigger: CACGTAGGAGCAGAACGCTCATGAAAGTGCTTGGAG...CCAGAGAAACAGGATTTCTGGGGTTTGGACTTGGGGTGAGTTTGTAACTGTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR GCA 90 bp GCAACAGTTACAAACTCACCCCAAGTCCAAACCCCAGAAATCCTGTTTCTCTGGCTTTATTTTCTGACCTaGACTCTCTGTGGTCATCCT +
Preference number: 4 (lower is better)
Translates to: ATVTNSPQVQTPEILFLWLYFLT*TLCGHP
Trigger: AGGATGACCACAGAGAGTGCAGGTCAGAAAATAAAG...CCAGAGAAACAGGATTTCTGGGGTTTGGACTTGGGGTGAGTTTGTAACTGTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS GCA 90 bp GCGCACAGCGCGTACAGCAACCTGCGCGGCGCCAGCAGCTCCAGGTaGCACACCTGGTCGGGGAACCGGAACGCCGCGGTCAGCAGCCCG +
Preference number: 5 (lower is better)
Translates to: AHSAYSNLRGASSSR*HTWSGNRNAAVSSP
Trigger: CGGGCTGCTGACCGCGGCGTTCCGGTTCCCCGACCAGGTGTGGCACCTGGAGCTGCTGGCGCCGCGCAGGTTGCTGTACGCGCTGTGCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS CCA 90 bp GCGTACAGCAACCTGCGCGGCGCCAGCAGCTCCAGGTGCCACACCTaGTCGGGGAACCGGAACGCCGCGGTCAGCAGCCCGCCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: AYSNLRGASSSRCHT*SGNRNAAVSSPPSW
Trigger: CCAGGAGGGCGGGCTGCTGACCGCGGCGTTCCGGTTCCCCGACCAGGTGTGGCACCTGGAGCTGCTGGCGCCGCGCAGGTTGCTGTACGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS GCA 90 bp CGGTGGACAGGAAGACCTCTGCCTCATGGCACAGCACGCGGGGCTTaGCCGCCGCCAGGCCCCCGAGAGGGCAGCAGAAGCCCGCCAGGT +
Preference number: 5 (lower is better)
Translates to: RWTGRPLPHGTARGA*PPPGPREGSRSPPG
Trigger: ACCTGGCGGGCTTCTGCTGCCCTCTCGGGGGCCTGGCGGCGGGCAAGCCCCGCGTGCTGTGCCATGAGGCAGAGGTCTTCCTGTCCACCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS CCA 90 bp GCGTACAGCAACCTGCGCGGCGCCAGCAGCTCCAGGTGCCACACCTaGTCGGGGAACCGGAACGCCGCCAGAGAACGCCCGTGGAGGGGC +
Preference number: 5 (lower is better)
Translates to: AYSNLRGASSSRCHT*SGNRNAARERPWRG
Trigger: GCCCCTCCACGGGCGTTCTCTGGCGGCGTTCCGGTTCCCCGACCAGGTGTGGCACCTGGAGCTGCTGGCGCCGCGCAGGTTGCTGTACGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544302.1
CDS GCA 90 bp GTCGTACACGTAGACGAGCTCGCTCCCGGTGGACAGGAAGACCTCTaGCTCATGGCACAGCACGCGGGGCTTGCCCGCCGCCAGGCCCCC +
Preference number: 5 (lower is better)
Translates to: VVHVDELAPGGQEDL*LMAQHAGLARRQAP
Trigger: GGGGGCCTGGCGGCGGGCAAGCCCCGCGTGCTGTGCCATGAGGCAGAGGTCTTCCTGTCCACCGGGAGCGAGCTCGTCTACGTGTACGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR CAA 90 bp TGCCCAGCAGTGAGGAAGGCGAGTGCAGGGGCTGCGGCCGCGGTCAGAGAAGGAGTCATCAGGCGGCCTTaGGCGGACAGGGCCAGGAGC +
Preference number: 5 (lower is better)
Translates to: CPAVRKASAGAAAAVREGVIRRP*ADRARS
Trigger: GCTCCTGGCCCTGTCCGCCAAAGGCCGCCTGATGAC...TCCTTCTCTGACCGCGGCCGCAGCCCCTGCACTCGCCTTCCTCACTGCTGGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS CCA 90 bp GCAGCCCGCCCTCCTGGTCGTACACGTAGACGAGCTCGCTCCCGGTaGACAGGAAGACCTCTGCCTCATGGCACAGCACGCGGGGCTTGC +
Preference number: 5 (lower is better)
Translates to: AARPPGRTRRRARSR*TGRPLPHGTARGAC
Trigger: GCAAGCCCCGCGTGCTGTGCCATGAGGCAGAGGTCTTCCTGTCCACCGGGAGCGAGCTCGTCTACGTGTACGACCAGGAGGGCGGGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR CAA 90 bp GGCCACCTCTCGGACGATGAGGTGAACGTTGGCGCCATCAGGGGCCACTCCCTGTGGGGCCCGTGCCGCTaGACAGCAGTGCACAGCTCA +
Preference number: 5 (lower is better)
Translates to: GHLSDDEVNVGAIRGHSLWGPCR*TAVHSS
Trigger: TGAGCTGTGCACTGCTGTCAAGCGGCACGGGCCCCA...CAGGGAGTGGCCCCTGATGGCGCCAACGTTCACCTCATCGTCCGAGAGGTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR CAA 90 bp CTCCTACCTCGGGGTCCCAGAGTGGGCAGCCGGGCAGGTGTGAACAGTGTGACACCCGCTGGCCCTTCCTaGGTGTGGCACGAGACCACG +
Preference number: 5 (lower is better)
Translates to: LLPRGPRVGSRAGVNSVTPAGPS*VWHETT
Trigger: CGTGGTCTCGTGCCACACCAAGGAAGGGCCAGCGGG...TGTCACACTGTTCACACCTGCCCGGCTGCCCACTCTGGGACCCCGAGGTAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CAA 90 bp CCCAGAGTGGGCAGCCGGGCAGGTGTGAACAGTGTGACAAGGGTACCGTGGGGCCAGGCAAACACCCTCTaGCTCGGGCAGGACGTCGGA +
Preference number: 5 (lower is better)
Translates to: PRVGSRAGVNSVTRVPWGQANTL*LGQDVG
Trigger: TCCGACGTCCTGCCCGAGCAAGAGGGTGTTTGCCTG...GCCCCACGGTACCCTTGTCACACTGTTCACACCTGCCCGGCTGCCCACTCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CAA 90 bp GCATGCGCCCGACAACGGCATGGTGCGCCCTGCAAATGTCGGCCAGAGAGGAGCAGCAGTGTCTCGTGGTaGGCGTGGATCTGGCGGAGG +
Preference number: 5 (lower is better)
Translates to: ACARQRHGAPCKCRPERSSSVSW*AWIWRR
Trigger: CCTCCGCCAGATCCACGCCAACCACGAGACACTGCT...GCTCCTCTCTGGCCGACATTTGCAGGGCGCACCATGCCGTTGTCGGGCGCATGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS CCA 90 bp GGAAGGATGCAGGCATCGGGGTCCACAGGGATCACGGGGGAAGGCTaGTCACCGTCCTCGCTGTCCCTGTCATCCTGGCTCGTAGACCTG +
Preference number: 5 (lower is better)
Translates to: GRMQASGSTGITGEG*SPSSLSLSSWLVDL
Trigger: CAGGTCTACGAGCCAGGATGACAGGGACAGCGAGGACGGTGACCAGCCTTCCCCCGTGATCCCTGTGGACCCCGATGCCTGCATCCTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000536161.1
ENST00000544302.1
CDS CCA 90 bp GGAAGGATGCAGGCATCGGGGTCCACAGGGATCACGGGGGAAGGCTaGTCACCGTCCTCGCTGTCCCTGTCATCCTGGCTCGTAGACCAG +
Preference number: 5 (lower is better)
Translates to: GRMQASGSTGITGEG*SPSSLSLSSWLVDQ
Trigger: CTGGTCTACGAGCCAGGATGACAGGGACAGCGAGGACGGTGACCAGCCTTCCCCCGTGATCCCTGTGGACCCCGATGCCTGCATCCTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541246.1
CDS-3UTR CAA 90 bp GCAGAGGACGCGAAGCTGGACCGGCCAGGTTCAGAGCCCGCCTCGGTTGCTCCCACGTTCATGGCCTCGTaGAGGCTTGTCAGTGCCTTG +
Preference number: 5 (lower is better)
Translates to: AEDAKLDRPGSEPASVAPTFMAS*RLVSAL
Trigger: CAAGGCACTGACAAGCCTCAACGAGGCCATGAACGT...GGGAGCAACCGAGGCGGGCTCTGAACCTGGCCGGTCCAGCTTCGCGTCCTCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CAA 90 bp CAGCGGGAGCGGCGCGAGCACCCTCCCCAGATGAAAACACCAGCACCAGGAGGTAGCTCCGCCGACACCTaGATGGAAGCCACAGATGGG +
Preference number: 5 (lower is better)
Translates to: QRERREHPPQMKTPAPGGSSADT*MEATDG
Trigger: CCCATCTGTGGCTTCCATCAAGGTGTCGGCGGAGCT...ACCTCCTGGTGCTGGTGTTTTCATCTGGGGAGGGTGCTCGCGCCGCTCCCGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CAA 90 bp GCATGCGCCCGACAACGGCATGGTGCGCCCTGCAAATGTCGGCCAGAGAGGAGCAGCTCCGCCGACACCTaGATGGAAGCCACAGATGGG +
Preference number: 5 (lower is better)
Translates to: ACARQRHGAPCKCRPERSSSADT*MEATDG
Trigger: CCCATCTGTGGCTTCCATCAAGGTGTCGGCGGAGCT...GCTCCTCTCTGGCCGACATTTGCAGGGCGCACCATGCCGTTGTCGGGCGCATGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443656.6
ENST00000545865.1
CDS-3UTR CAA 90 bp CTCCTACCTCGGGGTCCCAGAGTGGGCAGCCGGGCAGGTGTGAACAGTGTGACAAGCAGTGTCTCGTGGTaGGCGTGGATCTGGCGGAGG +
Preference number: 5 (lower is better)
Translates to: LLPRGPRVGSRAGVNSVTSSVSW*AWIWRR
Trigger: CCTCCGCCAGATCCACGCCAACCACGAGACACTGCT...TGTCACACTGTTCACACCTGCCCGGCTGCCCACTCTGGGACCCCGAGGTAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CAA 90 bp TCACGGCTCCTACCCGCACTCATCGCGGACAGTGCCTGCAGCGGGAGCGGCGCGCAATCAGAATCTGCTTaGTGCTCCACGGCCTCCAAG +
Preference number: 5 (lower is better)
Translates to: SRLLPALIADSACSGSGAQSESA*CSTASK
Trigger: CTTGGAGGCCGTGGAGCACAAAGCAGATTCTGATTG...CGCGCCGCTCCCGCTGCAGGCACTGTCCGCGATGAGTGCGGGTAGGAGCCGTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CAA 90 bp GTGGCACGAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGCTTGTCATCAGGCGGCCTTaGGCGGACAGGGCCAGGAGC +
Preference number: 5 (lower is better)
Translates to: VARDHGHLQELPACCFVLVIRRP*ADRARS
Trigger: GCTCCTGGCCCTGTCCGCCAAAGGCCGCCTGATGAC...AAGCACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR CAA 90 bp GTGTGGCACGAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGCTGGGGCCCGTGCCGCTaGACAGCAGTGCACAGCTCA +
Preference number: 5 (lower is better)
Translates to: VWHETTGTCRSSLHAVLCWGPCR*TAVHSS
Trigger: TGAGCTGTGCACTGCTGTCAAGCGGCACGGGCCCCA...GCACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTGCCACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CAA 90 bp CCCGACAACGGCATGGTGCGCCCTGCAAATGTCGGCCAGAGAGGAGCTTTCCACCAGGCAAACACCCTCTaGCTCGGGCAGGACGTCGGA +
Preference number: 5 (lower is better)
Translates to: PDNGMVRPANVGQRGAFHQANTL*LGQDVG
Trigger: TCCGACGTCCTGCCCGAGCAAGAGGGTGTTTGCCTG...GTGGAAAGCTCCTCTCTGGCCGACATTTGCAGGGCGCACCATGCCGTTGTCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443656.6
ENST00000545865.1
CDS-3UTR CAA 90 bp CACCTCTCGGACGATGAGGTGAACGTTGGCGCCATCAGGGGCCACTCCCTGGATCAGGCAAACACCCTCTaGCTCGGGCAGGACGTCGGA +
Preference number: 5 (lower is better)
Translates to: HLSDDEVNVGAIRGHSLDQANTL*LGQDVG
Trigger: TCCGACGTCCTGCCCGAGCAAGAGGGTGTTTGCCTG...ATCCAGGGAGTGGCCCCTGATGGCGCCAACGTTCACCTCATCGTCCGAGAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443656.6
ENST00000545865.1
CDS-3UTR CAA 90 bp CTGCGGTGGTGGGAAGGCTGCCCAGCAGTGAGGAAGGCGAGTGCAGGGGCTGCGATGCTGTTTTGTGCTTaGGTCTCAGGGAGCACCCTC +
Preference number: 5 (lower is better)
Translates to: LRWWEGCPAVRKASAGAAMLFCA*VSGSTL
Trigger: GAGGGTGCTCCCTGAGACCAAAGCACAAAACAGCAT...CGCAGCCCCTGCACTCGCCTTCCTCACTGCTGGGCAGCCTTCCCACCACCGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CAA 90 bp TGCGGGACCCTGGAGCCTGATGGTGACACAGAGCACAGCACTGGAAGGAAGTGGCGAGACCACGGGCACTaGCAGGAGCTCCCTGCATGC +
Preference number: 5 (lower is better)
Translates to: CGTLEPDGDTEHSTGRKWRDHGH*QELPAC
Trigger: GCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCG...CCACTTCCTTCCAGTGCTGTGCTCTGTGTCACCATCAGGCTCCAGGGTCCCGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR CAA 90 bp TTCAGAGCCCGCCTCGGTTGCTCCCAATCAGAATCTGCTTTGTGCTCCACGGCCCCCGCTGGCCCTTCCTaGGTGTGGCACGAGACCACG +
Preference number: 5 (lower is better)
Translates to: FRARLGCSQSESALCSTAPAGPS*VWHETT
Trigger: CGTGGTCTCGTGCCACACCAAGGAAGGGCCAGCGGG...GGCCGTGGAGCACAAAGCAGATTCTGATTGGGAGCAACCGAGGCGGGCTCTGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CAA 90 bp GAGGAAGGCGAGTGCAGGGGCTGCGGCCGCGGTCAGAGAAGGAGAGACACCAGCTGCATTACCCCACCCTaGGCTCCCCAGAATGTTCCT +
Preference number: 5 (lower is better)
Translates to: EEGECRGCGRGQRRRDTSCITPP*APQNVP
Trigger: AGGAACATTCTGGGGAGCCAAGGGTGGGGTAATGCA...GCTGGTGTCTCTCCTTCTCTGACCGCGGCCGCAGCCCCTGCACTCGCCTTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425898.2
CDS-3UTR CAA 90 bp GTGTGGCACGAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGCCAGGCAAACACCCTCTaGCTCGGGCAGGACGTCGGA +
Preference number: 5 (lower is better)
Translates to: VWHETTGTCRSSLHAVLCQANTL*LGQDVG
Trigger: TCCGACGTCCTGCCCGAGCAAGAGGGTGTTTGCCTG...GCACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTGCCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CAA 90 bp ACGGACAGACAGGGTCGTTTGTCACAGCAGAGAAGCACCTCACGGCTCCTACCCCGAGACCACGGGCACTaGCAGGAGCTCCCTGCATGC +
Preference number: 5 (lower is better)
Translates to: TDRQGRLSQQRSTSRLLPRDHGH*QELPAC
Trigger: GCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCG...GGGTAGGAGCCGTGAGGTGCTTCTCTGCTGTGACAAACGACCCTGTCTGTCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CAA 90 bp AGCACTTTCATGAGCGTTCTGCTCCTACGTGGCCAGGTCCTACCTTCCCTGACGCCCGCTGGCCCTTCCTaGGTGTGGCACGAGACCACG +
Preference number: 5 (lower is better)
Translates to: STFMSVLLLRGQVLPSLTPAGPS*VWHETT
Trigger: CGTGGTCTCGTGCCACACCAAGGAAGGGCCAGCGGG...CGTCAGGGAAGGTAGGACCTGGCCACGTAGGAGCAGAACGCTCATGAAAGTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CAA 90 bp GAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGCTTTGGTCTCTGGGGCCCGTGCCGCTaGACAGCAGTGCACAGCTCA +
Preference number: 5 (lower is better)
Translates to: ETTGTCRSSLHAVLCFGLWGPCR*TAVHSS
Trigger: TGAGCTGTGCACTGCTGTCAAGCGGCACGGGCCCCA...GAGACCAAAGCACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CAA 90 bp TGGTGTGGCACGAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTAGCAGTGTCTCGTGGTaGGCGTGGATCTGGCGGAGG +
Preference number: 5 (lower is better)
Translates to: WCGTRPRALAGAPCMLFCSSVSW*AWIWRR
Trigger: CCTCCGCCAGATCCACGCCAACCACGAGACACTGCT...ACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTGCCACACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CAA 90 bp GCTGCTCAGGGCCCAGCGGGGTGCTTCCCCGAGACAGATCCACCACACAGAGGTCAATCAGAATCTGCTTaGTGCTCCACGGCCTCCAAG +
Preference number: 5 (lower is better)
Translates to: AAQGPAGCFPETDPPHRGQSESA*CSTASK
Trigger: CTTGGAGGCCGTGGAGCACAAAGCAGATTCTGATTG...ACCTCTGTGTGGTGGATCTGTCTCGGGGAAGCACCCCGCTGGGCCCTGAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR CAA 90 bp CTCCTACCTCGGGGTCCCAGAGTGGGCAGCCGGGCAGGTGTGAACAGTGTGACAGACAGACAGGGTCGTTaGTCACAGCAGAGAAGCACC +
Preference number: 5 (lower is better)
Translates to: LLPRGPRVGSRAGVNSVTDRQGR*SQQRST
Trigger: GGTGCTTCTCTGCTGTGACAAACGACCCTGTCTGTC...TGTCACACTGTTCACACCTGCCCGGCTGCCCACTCTGGGACCCCGAGGTAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CAA 90 bp ACAGGGATCACGGGGGAAGGCTGGTCACCGTCCTCGCTGTCCCTGTCATCCTGGGACAGACAGGGTCGTTaGTCACAGCAGAGAAGCACC +
Preference number: 5 (lower is better)
Translates to: TGITGEGWSPSSLSLSSWDRQGR*SQQRST
Trigger: GGTGCTTCTCTGCTGTGACAAACGACCCTGTCTGTC...CCAGGATGACAGGGACAGCGAGGACGGTGACCAGCCTTCCCCCGTGATCCCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR CAA 90 bp CAGGGTCGTTTGTCACAGCAGAGAAGCACCTCACGGCTCCTACCCGCACTCATCAGCTCCGCCGACACCTaGATGGAAGCCACAGATGGG +
Preference number: 5 (lower is better)
Translates to: QGRLSQQRSTSRLLPALISSADT*MEATDG
Trigger: CCCATCTGTGGCTTCCATCAAGGTGTCGGCGGAGCT...GATGAGTGCGGGTAGGAGCCGTGAGGTGCTTCTCTGCTGTGACAAACGACCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CAA 90 bp CAGAGTGGGCAGCCGGGCAGGTGTGAACAGTGTGACAAGGGTACCGTGGGGCACAGAGGAGCTTTCCACTaGAATCTCCACGGCCTGGAT +
Preference number: 5 (lower is better)
Translates to: QSGQPGRCEQCDKGTVGHRGAFH*NLHGLD
Trigger: ATCCAGGCCGTGGAGATTCAAGTGGAAAGCTCCTCT...GTGCCCCACGGTACCCTTGTCACACTGTTCACACCTGCCCGGCTGCCCACTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS CCA 90 bp GTCCTAGAGGAAATGATCACGATCACGTGGAGGAGGAAACGGACGTaGGAGAAGGCCCGCCAAACCAGCAGCCTCACCCCGCGGTTTACT +
Preference number: 5 (lower is better)
Translates to: VLEEMITITWRRKRT*EKARQTSSLTPRFT
Trigger: AGTAAACCGCGGGGTGAGGCTGCTGGTTTGGCGGGCCTTCTCCCACGTCCGTTTCCTCCTCCACGTGATCGTGATCATTTCCTCTAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536161.1
CDS-3UTR CAA 90 bp TTGTGCTCCACGGCCTCCAAGCACTTTCATGAGCGTTCTGCTCCTACGTGGCCAAGGCTTGTCAGTGCCTaGTTCCGCTGGTCAACCGCC +
Preference number: 5 (lower is better)
Translates to: LCSTASKHFHERSAPTWPRLVSA*FRWSTA
Trigger: GGCGGTTGACCAGCGGAACAAGGCACTGACAAGCCT...TGGCCACGTAGGAGCAGAACGCTCATGAAAGTGCTTGGAGGCCGTGGAGCACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CAA 90 bp GGCCCTGAAAATAGTGCACAGTGCTGGGTACTGCCCCGGCTGGAGGCACCTAGTACGTTCATGGCCTCGTaGAGGCTTGTCAGTGCCTTG +
Preference number: 5 (lower is better)
Translates to: GPENSAQCWVLPRLEAPSTFMAS*RLVSAL
Trigger: CAAGGCACTGACAAGCCTCAACGAGGCCATGAACGT...ACTAGGTGCCTCCAGCCGGGGCAGTACCCAGCACTGTGCACTATTTTCAGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CAA 90 bp TTGTGCTCCACGGCCTCCAAGCACTTTCATGAGCGTTCTGCTCCTACGTGGCCAAGCTCCGCCGACACCTaGATGGAAGCCACAGATGGG +
Preference number: 5 (lower is better)
Translates to: LCSTASKHFHERSAPTWPSSADT*MEATDG
Trigger: CCCATCTGTGGCTTCCATCAAGGTGTCGGCGGAGCT...TGGCCACGTAGGAGCAGAACGCTCATGAAAGTGCTTGGAGGCCGTGGAGCACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CAA 90 bp CCCGACAACGGCATGGTGCGCCCTGCAAATGTCGGCCAGAGAGGAGCTTTCCACAGAGGAGCTTTCCACTaGAATCTCCACGGCCTGGAT +
Preference number: 5 (lower is better)
Translates to: PDNGMVRPANVGQRGAFHRGAFH*NLHGLD
Trigger: ATCCAGGCCGTGGAGATTCAAGTGGAAAGCTCCTCT...GTGGAAAGCTCCTCTCTGGCCGACATTTGCAGGGCGCACCATGCCGTTGTCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443656.6
ENST00000545865.1
CDS-3UTR CAA 90 bp CCAAGCACTTTCATGAGCGTTCTGCTCCTACGTGGCCAGGTCCTACCTTCCCTGCAGAGCCCGCCTCGGTaGCTCCCAATCAGAATCTGC +
Preference number: 5 (lower is better)
Translates to: PSTFMSVLLLRGQVLPSLQSPPR*LPIRIC
Trigger: GCAGATTCTGATTGGGAGCAACCGAGGCGGGCTCTG...CAGGGAAGGTAGGACCTGGCCACGTAGGAGCAGAACGCTCATGAAAGTGCTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CAA 90 bp ACTTTCATGAGCGTTCTGCTCCTACGTGGCCAGGTCCTACCTTCCCTGACGGCTCAGAGCCCGCCTCGGTaGCTCCCAATCAGAATCTGC +
Preference number: 5 (lower is better)
Translates to: TFMSVLLLRGQVLPSLTAQSPPR*LPIRIC
Trigger: GCAGATTCTGATTGGGAGCAACCGAGGCGGGCTCTG...AGCCGTCAGGGAAGGTAGGACCTGGCCACGTAGGAGCAGAACGCTCATGAAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CAA 90 bp TCTCGTGGTTGGCGTGGATCTGGCGGAGGTACTGCACACGGAGATCAGGAGCGCATGCTGTTTTGTGCTTaGGTCTCAGGGAGCACCCTC +
Preference number: 5 (lower is better)
Translates to: SRGWRGSGGGTAHGDQERMLFCA*VSGSTL
Trigger: GAGGGTGCTCCCTGAGACCAAAGCACAAAACAGCAT...GCGCTCCTGATCTCCGTGTGCAGTACCTCCGCCAGATCCACGCCAACCACGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR CAA 90 bp GGGTCGTTTGTCACAGCAGAGAAGCACCTCACGGCTCCTACCCGCACTCATCGCACTCTCTCAGAGATGTaGCCAATTCCAGACAGCAGC +
Preference number: 5 (lower is better)
Translates to: GSFVTAEKHLTAPTRTHRTLSEM*PIPDSS
Trigger: GCTGCTGTCTGGAATTGGCAACATCTCTGAGAGAGT...GCGATGAGTGCGGGTAGGAGCCGTGAGGTGCTTCTCTGCTGTGACAAACGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS-3UTR CAA 90 bp GGATGGAAGATAGTGCTCGGGCCCTCACGACGTCCACAGCAGCATTCTCAGCAAACGTTCATGGCCTCGTaGAGGCTTGTCAGTGCCTTG +
Preference number: 5 (lower is better)
Translates to: GWKIVLGPSRRPQQHSQQTFMAS*RLVSAL
Trigger: CAAGGCACTGACAAGCCTCAACGAGGCCATGAACGT...TTGCTGAGAATGCTGCTGTGGACGTCGTGAGGGCCCGAGCACTATCTTCCATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS-3UTR CAA 90 bp GTGGCACGAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGCTTAGAGGAGCTTTCCACTaGAATCTCCACGGCCTGGAT +
Preference number: 5 (lower is better)
Translates to: VARDHGHLQELPACCFVLRGAFH*NLHGLD
Trigger: ATCCAGGCCGTGGAGATTCAAGTGGAAAGCTCCTCT...AAGCACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CAA 90 bp ACGGACAGACAGGGTCGTTTGTCACAGCAGAGAAGCACCTCACGGCTCCTACCCAGAGGAGCTTTCCACTaGAATCTCCACGGCCTGGAT +
Preference number: 5 (lower is better)
Translates to: TDRQGRLSQQRSTSRLLPRGAFH*NLHGLD
Trigger: ATCCAGGCCGTGGAGATTCAAGTGGAAAGCTCCTCT...GGGTAGGAGCCGTGAGGTGCTTCTCTGCTGTGACAAACGACCCTGTCTGTCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CAA 90 bp CAGGGTCGTTTGTCACAGCAGAGAAGCACCTCACGGCTCCTACCCGCACTCATCCAATCAGAATCTGCTTaGTGCTCCACGGCCTCCAAG +
Preference number: 5 (lower is better)
Translates to: QGRLSQQRSTSRLLPALIQSESA*CSTASK
Trigger: CTTGGAGGCCGTGGAGCACAAAGCAGATTCTGATTG...GATGAGTGCGGGTAGGAGCCGTGAGGTGCTTCTCTGCTGTGACAAACGACCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CAA 90 bp CGCCCGACAACGGCATGGTGCGCCCTGCAAATGTCGGCCAGAGAGGAGCTTTCCTGTGAAGCTCACAGTTaGCTCCTTTGTGACTCTTCT +
Preference number: 5 (lower is better)
Translates to: RPTTAWCALQMSAREELSCEAHS*LLCDSS
Trigger: AGAAGAGTCACAAAGGAGCAAACTGTGAGCTTCACA...GGAAAGCTCCTCTCTGGCCGACATTTGCAGGGCGCACCATGCCGTTGTCGGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545865.1
CDS CCA 90 bp GTCAGATGCCGCATCGTTGTGAATTTCCCCACAGGGATCCTCCGCTaGTCTTCTGACCGAATTTCCCCACAGGAATCCGCAGGTCTTCTG +
Preference number: 5 (lower is better)
Translates to: VRCRIVVNFPTGILR*SSDRISPQESAGLL
Trigger: CAGAAGACCTGCGGATTCCTGTGGGGAAATTCGGTCAGAAGACCAGCGGAGGATCCCTGTGGGGAAATTCACAACGATGCGGCATCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536161.1
CDS-3UTR CAA 90 bp GTTACAAACTCACCCCAAGTCCAAACCCCAGAAATCCTGTTTCTCTGGCCCTCCCAGAGCCCGCCTCGGTaGCTCCCAATCAGAATCTGC +
Preference number: 5 (lower is better)
Translates to: VTNSPQVQTPEILFLWPSQSPPR*LPIRIC
Trigger: GCAGATTCTGATTGGGAGCAACCGAGGCGGGCTCTG...GGAGGGCCAGAGAAACAGGATTTCTGGGGTTTGGACTTGGGGTGAGTTTGTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CAA 90 bp TGGCACGAGACCACGGGCACTTGCAGGAGCTCCCTGCATGCTGTTTTGTGCTTTATGCTGTTTTGTGCTTaGGTCTCAGGGAGCACCCTC +
Preference number: 5 (lower is better)
Translates to: WHETTGTCRSSLHAVLCFMLFCA*VSGSTL
Trigger: GAGGGTGCTCCCTGAGACCAAAGCACAAAACAGCAT...AAAGCACAAAACAGCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCGTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS-3UTR CAA 90 bp CAACAGTTACAAACTCACCCCAAGTCCAAACCCCAGAAATCCTGTTTCTCTGGCCGAGACCACGGGCACTaGCAGGAGCTCCCTGCATGC +
Preference number: 5 (lower is better)
Translates to: QQLQTHPKSKPQKSCFSGRDHGH*QELPAC
Trigger: GCATGCAGGGAGCTCCTGCAAGTGCCCGTGGTCTCG...GCCAGAGAAACAGGATTTCTGGGGTTTGGACTTGGGGTGAGTTTGTAACTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327787.13
ENST00000425898.2
ENST00000443656.6
CDS GCA 90 bp CCCATCCAGTCCTCCCAGGCCATCTCTTCCATACGGATGGTAACATaGCAAGACTGTCCTAGAGGAAATGATCACGATCACGTGGAGGAG +
Preference number: 5 (lower is better)
Translates to: PIQSSQAISSIRMVT*QDCPRGNDHDHVEE
Trigger: CTCCTCCACGTGATCGTGATCATTTCCTCTAGGACAGTCTTGGCATGTTACCATCCGTATGGAAGAGATGGCCTGGGAGGACTGGATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536161.1
CDS CCA 90 bp CTCACGTTCATGGCCTCGTTGAGGCTTGTCAGTGCCTTGTTCCGCTaGTCAACCGCCTTCTTTAGAAAAGACACTCTGCGAAGGACAGAC +
Preference number: 5 (lower is better)
Translates to: LTFMASLRLVSALFR*STAFFRKDTLRRTD
Trigger: GTCTGTCCTTCGCAGAGTGTCTTTTCTAAAGAAGGCGGTTGACCAGCGGAACAAGGCACTGACAAGCCTCAACGAGGCCATGAACGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425898.2
CDS-3UTR CAA 90 bp CAACAGTTACAAACTCACCCCAAGTCCAAACCCCAGAAATCCTGTTTCTCTGGCACTCTCTCAGAGATGTaGCCAATTCCAGACAGCAGC +
Preference number: 5 (lower is better)
Translates to: QQLQTHPKSKPQKSCFSGTLSEM*PIPDSS
Trigger: GCTGCTGTCTGGAATTGGCAACATCTCTGAGAGAGT...GCCAGAGAAACAGGATTTCTGGGGTTTGGACTTGGGGTGAGTTTGTAACTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS GCA 72 bp AGTGTGCGGGAGGGAGGCCGCGGGCCCGCCCTCACCTaGTCCTGCCCGGGTGGTCCAGCGACAGGCAGTAGA +
Preference number: 6 (lower is better)
Translates to: SVREGGRGPALT*SCPGGPATGSR
Trigger: TCTACTGCCTGTCGCTGGACCACCCGGGCAGGAGCAGGTGAGGGCGGGCCCGCGGCCTCCCTCCCGCACACT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443656.6
CDS CCA 72 bp AACCTGCGCGGCGCCAGCAGCTCCAGGTGCCACACCTaGTCGGGGAACCGGAACGCCGCGGTCAGCAGCCCG +
Preference number: 6 (lower is better)
Translates to: NLRGASSSRCHT*SGNRNAAVSSP
Trigger: CGGGCTGCTGACCGCGGCGTTCCGGTTCCCCGACCAGGTGTGGCACCTGGAGCTGCTGGCGCCGCGCAGGTT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS CAA 90 bp CCGGTGGACAGGAAGACCTCTGCCTCATGGCACAGCACGCGGGGCTaGCCCGCCGCCAGGCCCCCGAGAGGGCAGCAGAAGCCCGCCAGG +
Preference number: 6 (lower is better)
Translates to: PVDRKTSASWHSTRG*PAARPPRGQQKPAR
Trigger: CCTGGCGGGCTTCTGCTGCCCTCTCGGGGGCCTGGCGGCGGGCAAGCCCCGCGTGCTGTGCCATGAGGCAGAGGTCTTCCTGTCCACCGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS GCA 72 bp GGAAGACCTCTGCCTCATGGCACAGCACGCGGGGCTTaGCCGCCGCCAGGCCCCCGAGAGGGCAGCAGAAGC +
Preference number: 6 (lower is better)
Translates to: GRPLPHGTARGA*PPPGPREGSRS
Trigger: GCTTCTGCTGCCCTCTCGGGGGCCTGGCGGCGGGCAAGCCCCGCGTGCTGTGCCATGAGGCAGAGGTCTTCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS GCA 72 bp GCGTACAGCAACCTGCGCGGCGCCAGCAGCTCCAGGTaGCACACCTGGTCGGGGAACCGGAACGCCGCGGTC +
Preference number: 6 (lower is better)
Translates to: AYSNLRGASSSR*HTWSGNRNAAV
Trigger: GACCGCGGCGTTCCGGTTCCCCGACCAGGTGTGGCACCTGGAGCTGCTGGCGCCGCGCAGGTTGCTGTACGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS CCA 72 bp AACCTGCGCGGCGCCAGCAGCTCCAGGTGCCACACCTaGTCGGGGAACCGGAACGCCGCCAGAGAACGCCCG +
Preference number: 6 (lower is better)
Translates to: NLRGASSSRCHT*SGNRNAARERP
Trigger: CGGGCGTTCTCTGGCGGCGTTCCGGTTCCCCGACCAGGTGTGGCACCTGGAGCTGCTGGCGCCGCGCAGGTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544302.1
CDS GCA 72 bp GTAGACGAGCTCGCTCCCGGTGGACAGGAAGACCTCTaGCTCATGGCACAGCACGCGGGGCTTGCCCGCCGC +
Preference number: 6 (lower is better)
Translates to: VDELAPGGQEDL*LMAQHAGLARR
Trigger: GCGGCGGGCAAGCCCCGCGTGCTGTGCCATGAGGCAGAGGTCTTCCTGTCCACCGGGAGCGAGCTCGTCTAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS CCA 72 bp CCTCCTGGTCGTACACGTAGACGAGCTCGCTCCCGGTaGACAGGAAGACCTCTGCCTCATGGCACAGCACGC +
Preference number: 6 (lower is better)
Translates to: PPGRTRRRARSR*TGRPLPHGTAR
Trigger: GCGTGCTGTGCCATGAGGCAGAGGTCTTCCTGTCCACCGGGAGCGAGCTCGTCTACGTGTACGACCAGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327787.13
ENST00000443656.6
CDS TCA 72 bp AGCAGGGGAGGCTGCGCGCACTCAGTGTGTTCTCTCTaGACGTCCCGAAGCCAGTGCTGCGGGAGGAAAAGC +
Preference number: 6 (lower is better)
Translates to: SRGGCAHSVCSL*TSRSQCCGRKS
Trigger: GCTTTTCCTCCCGCAGCACTGGCTTCGGGACGTTCAGAGAGAACACACTGAGTGCGCGCAGCCTCCCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425898.2
CDS TCA 72 bp GCTACAGAAACAGCCCTAAACCACAGGGACCCGGAGTaGCAGGCCCCTCGCTCTCGGGACCCCAGTGGTTAT +
Preference number: 6 (lower is better)
Translates to: ATETALNHRDPE*QAPRSRDPSGY
Trigger: ATAACCACTGGGGTCCCGAGAGCGAGGGGCCTGTCACTCCGGGTCCCTGTGGTTTAGGGCTGTTTCTGTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425898.2
CDS CCA 72 bp GAAATGATCACGATCACGTGGAGGAGGAAACGGACGTaGGAGAAGGCCCGCCAAACCAGCAGCCTCACCCCG +
Preference number: 6 (lower is better)
Translates to: EMITITWRRKRT*EKARQTSSLTP
Trigger: CGGGGTGAGGCTGCTGGTTTGGCGGGCCTTCTCCCACGTCCGTTTCCTCCTCCACGTGATCGTGATCATTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536161.1
CDS GCA 72 bp CTGTCATCCTGGCTCGTAGACCTGGAGTCAGTTCCTTaGTCCTCTCTTCTCGCCAGGGCTGCTCTGAAGGTG +
Preference number: 6 (lower is better)
Translates to: LSSWLVDLESVP*SSLLARAALKV
Trigger: CACCTTCAGAGCAGCCCTGGCGAGAAGAGAGGAGCAAGGAACTGACTCCAGGTCTACGAGCCAGGATGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536161.1
CDS CCA 72 bp GCCAAGACTGTCCTAGAGGAAATGATCACGATCACGTaGAGGAGGAAACGGACGTGGGAGAAGGCCCGCCAA +
Preference number: 6 (lower is better)
Translates to: AKTVLEEMITIT*RRKRTWEKARQ
Trigger: TTGGCGGGCCTTCTCCCACGTCCGTTTCCTCCTCCACGTGATCGTGATCATTTCCTCTAGGACAGTCTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536161.1
CDS CCA 72 bp CGCATCGTTGTGAATTTCCCCACAGGGATCCTCCGCTaGTCTTCTGACCGAATTTCCCCACAGGAATCCGCA +
Preference number: 6 (lower is better)
Translates to: RIVVNFPTGILR*SSDRISPQESA
Trigger: TGCGGATTCCTGTGGGGAAATTCGGTCAGAAGACCAGCGGAGGATCCCTGTGGGGAAATTCACAACGATGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536161.1
CDS TCA 72 bp TGTGAATTTCCCCACAGGGATCCTCCGCTGGTCTTCTaGCCGAATTTCCCCACAGGAATCCGCAGGTCTTCT +
Preference number: 6 (lower is better)
Translates to: CEFPHRDPPLVF*PNFPTGIRRSS
Trigger: AGAAGACCTGCGGATTCCTGTGGGGAAATTCGGTCAGAAGACCAGCGGAGGATCCCTGTGGGGAAATTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536161.1
CDS GCA 72 bp GGAGTCAGTTCCTTGCTCCTCTCTTCTCGCCAGGGCTaGTCTGAAGGTGTTTGGGCTGGAAATGCTGTCTTT +
Preference number: 6 (lower is better)
Translates to: GVSSLLLSSRQG*SEGVWAGNAVF
Trigger: AAAGACAGCATTTCCAGCCCAAACACCTTCAGAGCAGCCCTGGCGAGAAGAGAGGAGCAAGGAACTGACTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536161.1
CDS CAA 90 bp AGTGCACAGCTCACGTTCATGGCCTCGTTGAGGCTTGTCAGTGCCTaGTTCCGCTGGTCAACCGCCTTCTTTAGAAAAGACACTCTGCGA +
Preference number: 6 (lower is better)
Translates to: SAQLTFMASLRLVSA*FRWSTAFFRKDTLR
Trigger: TCGCAGAGTGTCTTTTCTAAAGAAGGCGGTTGACCAGCGGAACAAGGCACTGACAAGCCTCAACGAGGCCATGAACGTGAGCTGTGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425898.2
CDS CCA 72 bp ATGGCCTCGTTGAGGCTTGTCAGTGCCTTGTTCCGCTaGTCAACCGCCTTCTTTAGAAAAGACACTCTGCGA +
Preference number: 6 (lower is better)
Translates to: MASLRLVSALFR*STAFFRKDTLR
Trigger: TCGCAGAGTGTCTTTTCTAAAGAAGGCGGTTGACCAGCGGAACAAGGCACTGACAAGCCTCAACGAGGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425898.2
CDS GCA 72 bp TCCTCCCAGGCCATCTCTTCCATACGGATGGTAACATaGCAAGACTGTCCTAGAGGAAATGATCACGATCAC +
Preference number: 6 (lower is better)
Translates to: SSQAISSIRMVT*QDCPRGNDHDH
Trigger: GTGATCGTGATCATTTCCTCTAGGACAGTCTTGGCATGTTACCATCCGTATGGAAGAGATGGCCTGGGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536161.1