Pregenerated sensors for F3 (Homo sapiens)
Ensembl gene IDs: ENSG00000117525Ensembl transcript IDs: ENST00000334047.12, ENST00000370207.4, ENST00000478217.5, ENST00000480356.1
Found 110 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GAACTCCAGGGTCTTCATGCTCCGAAATACTCATTTGCGTTTCCATGTATTCTAGTGCAATATAGCATTTaGAGTAGCTCCAACAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: ELQGLHAPKYSFAFPCILVQYSI*SSSNSA Trigger: AGCACTGTTGGAGCTACTGCAAATGCTATATTGCAC...TAGAATACATGGAAACGCAAATGAGTATTTCGGAGCATGAAGACCCTGGAGTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000370207.4 |
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| 3UTR-3UTR GCA 90 bp | TTACTCCTTGAGTGCGGAATATATAATCTAAAGCATGTTATGTGCAAAAGGTGCACTCCAGGGTCTTCATaGTCCGAAATACTCATTTGC | + |
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Preference number: 2 (lower is better) Translates to: LLLECGIYNLKHVMCKRCTPGSS*SEILIC Trigger: GCAAATGAGTATTTCGGAGCATGAAGACCCTGGAGT...GCACCTTTTGCACATAACATGCTTTAGATTATATATTCCGCACTCAAGGAGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000370207.4 |
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| 3UTR-3UTR GCA 90 bp | TTACTCCTTGAGTGCGGAATATATAATCTAAAGCATGTTATGTGCAAAAGGTGCGTGCAATATAGCATTTaGAGTAGCTCCAACAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: LLLECGIYNLKHVMCKRCVQYSI*SSSNSA Trigger: AGCACTGTTGGAGCTACTGCAAATGCTATATTGCAC...GCACCTTTTGCACATAACATGCTTTAGATTATATATTCCGCACTCAAGGAGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000370207.4 |
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| 3UTR-3UTR GCA 90 bp | TTTGTTTTTGCTTGGACGACCTGGTTACTCCTTGAGTGCGGAATATATAATCTACTAAAGCATGTTATGTaGAAAAGGTGCCATGGTGTT | + |
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Preference number: 2 (lower is better) Translates to: FVFAWTTWLLLECGIYNLLKHVM*KRCHGV Trigger: AACACCATGGCACCTTTTGCACATAACATGCTTTAG...TAGATTATATATTCCGCACTCAAGGAGTAACCAGGTCGTCCAAGCAAAAACAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000370207.4 |
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| 3UTR CAA 90 bp | AAAACCAGAATGCTAATGGTAATAACAGGTCATATCAAGAGTTTTTaGAACTCCAGGGTCTTCATGCTCCGAAATACTCATTTGCGTTTC | + |
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Preference number: 2 (lower is better) Translates to: KTRMLMVITGHIKSF*NSRVFMLRNTHLRF Trigger: GAAACGCAAATGAGTATTTCGGAGCATGAAGACCCTGGAGTTCAAAAAACTCTTGATATGACCTGTTATTACCATTAGCATTCTGGTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000370207.4 |
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| 3UTR-3UTR GCA 90 bp | TTACTCCTTGAGTGCGGAATATATAATCTAAAGCATGTTATGTGCAAAAGGTGCAGTTCTCGGTCACAGTaGAATATAGCATTTGCAGTA | + |
|
Preference number: 2 (lower is better) Translates to: LLLECGIYNLKHVMCKRCSSRSQ*NIAFAV Trigger: TACTGCAAATGCTATATTGCACTGTGACCGAGAACT...GCACCTTTTGCACATAACATGCTTTAGATTATATATTCCGCACTCAAGGAGTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000370207.4 |
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| 3UTR TCA 72 bp | TCCCAGCTACTCGGGAGGCTGAGGCAGACAATTGCTTaGACCCGAGAGACGGAGGGTGCAGTGAGCCGAGAT | + |
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Preference number: 3 (lower is better) Translates to: SQLLGRLRQTIA*TRETEGAVSRD Trigger: ATCTCGGCTCACTGCACCCTCCGTCTCTCGGGTTCAAGCAATTGTCTGCCTCAGCCTCCCGAGTAGCTGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000370207.4 |
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| 3UTR-3UTR CAA 90 bp | CCAGCTACTCGGGAGGCTGAGGCAGACAATTGCTTGAACCCGAGAGACGGAGGGCATATCAAGAGTTTTTaGAACTCCAGGGTCTTCATG | + |
|
Preference number: 3 (lower is better) Translates to: PATREAEADNCLNPRDGGHIKSF*NSRVFM Trigger: CATGAAGACCCTGGAGTTCAAAAAACTCTTGATATG...CCCTCCGTCTCTCGGGTTCAAGCAATTGTCTGCCTCAGCCTCCCGAGTAGCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000370207.4 |
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| 3UTR GCA 72 bp | CATGTATTCTATCCTCTTAAAAGTTCTCGGTCACAGTaGAATATAGCATTTGCAGTAGCTCCAACAGTGCTT | + |
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Preference number: 3 (lower is better) Translates to: HVFYPLKSSRSQ*NIAFAVAPTVL Trigger: AAGCACTGTTGGAGCTACTGCAAATGCTATATTGCACTGTGACCGAGAACTTTTAAGAGGATAGAATACATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000370207.4 |
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| 3UTR GCA 72 bp | TTTGTTTTTGCTTGGACGACCTGGTTACTCCTTGAGTaGGGAATATATAATCTAAAGCATGTTATGTGCAAA | + |
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Preference number: 3 (lower is better) Translates to: FVFAWTTWLLLE*GIYNLKHVMCK Trigger: TTTGCACATAACATGCTTTAGATTATATATTCCGCACTCAAGGAGTAACCAGGTCGTCCAAGCAAAAACAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000370207.4 |
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| CDS-3UTR GCA 90 bp | CCAGCTACTCGGGAGGCTGAGGCAGACAATTGCTTGAACCCGAGAGACGGAGGGCCGAGATCGTGCTACTaGACTCCAGCCTGGGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: PATREAEADNCLNPRDGGPRSCY*TPAWAT Trigger: TGTTGCCCAGGCTGGAGTGCAGTAGCACGATCTCGG...CCCTCCGTCTCTCGGGTTCAAGCAATTGTCTGCCTCAGCCTCCCGAGTAGCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000370207.4 |
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| 3UTR CAA 72 bp | ATCCCAGCTACTCGGGAGGCTGAGGCAGACAATTGCTaGAACCCGAGAGACGGAGGGTGCAGTGAGCCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: IPATREAEADNC*NPRDGGCSEPR Trigger: TCTCGGCTCACTGCACCCTCCGTCTCTCGGGTTCAAGCAATTGTCTGCCTCAGCCTCCCGAGTAGCTGGGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000370207.4 |
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| CDS-3UTR TCA 90 bp | CCAGCTACTCGGGAGGCTGAGGCAGACAATTGCTTGAACCCGAGAGACGGAGGGTCACAATCTCGTCGGTaGGGTCACACTCTGTGTCTG | + |
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Preference number: 4 (lower is better) Translates to: PATREAEADNCLNPRDGGSQSRR*GHTLCL Trigger: CAGACACAGAGTGTGACCTCACCGACGAGATTGTGA...CCCTCCGTCTCTCGGGTTCAAGCAATTGTCTGCCTCAGCCTCCCGAGTAGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000370207.4 |
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| CDS-3UTR CCA 90 bp | GAACTCCAGGGTCTTCATGCTCCGAAATACTCATTTGCGTTTCCATGTATTCTAGGGCTGAAGGCGCCCTaGGCCGGCCAGAGGGAGTGC | + |
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Preference number: 4 (lower is better) Translates to: ELQGLHAPKYSFAFPCILGLKAP*AGQREC Trigger: GCACTCCCTCTGGCCGGCCCAGGGCGCCTTCAGCCC...TAGAATACATGGAAACGCAAATGAGTATTTCGGAGCATGAAGACCCTGGAGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334047.12 |
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| CDS-3UTR GCA 90 bp | CCAGCTACTCGGGAGGCTGAGGCAGACAATTGCTTGAACCCGAGAGACGGAGGGACTCCAGGGTCTTCATaGTCCGAAATACTCATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: PATREAEADNCLNPRDGGTPGSS*SEILIC Trigger: GCAAATGAGTATTTCGGAGCATGAAGACCCTGGAGT...CCCTCCGTCTCTCGGGTTCAAGCAATTGTCTGCCTCAGCCTCCCGAGTAGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000370207.4 |
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| CDS-3UTR CCA 90 bp | AAAAGTTCTCGGTCACAGTGCAATATAGCATTTGCAGTAGCTCCAACAGTGCTTGTTCCGTGGCGCCCGTaGGGCTGGGGAGGTTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: KSSRSQCNIAFAVAPTVLVPWRP*GWGGWA Trigger: AGCCCAACCTCCCCAGCCCCACGGGCGCCACGGAAC...AAGCACTGTTGGAGCTACTGCAAATGCTATATTGCACTGTGACCGAGAACTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334047.12 |
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| CDS-3UTR CCA 90 bp | GAACTCCAGGGTCTTCATGCTCCGAAATACTCATTTGCGTTTCCATGTATTCTAGAAGCGCCGGCCACCTaGGCGAAGACCCAGCCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ELQGLHAPKYSFAFPCILEAPAT*AKTQPS Trigger: GCTCGGCTGGGTCTTCGCCCAGGTGGCCGGCGCTTC...TAGAATACATGGAAACGCAAATGAGTATTTCGGAGCATGAAGACCCTGGAGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000370207.4 |
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| CDS-3UTR TCA 90 bp | CCAGCTACTCGGGAGGCTGAGGCAGACAATTGCTTGAACCCGAGAGACGGAGGGGCTTTTCCAATCTCCTaGCTTAGTGCTTATTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PATREAEADNCLNPRDGGAFPIS*LSAYLN Trigger: GTTCAAATAAGCACTAAGTCAGGAGATTGGAAAAGC...CCCTCCGTCTCTCGGGTTCAAGCAATTGTCTGCCTCAGCCTCCCGAGTAGCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000370207.4 |
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| CDS-3UTR GCA 90 bp | CCAGCTACTCGGGAGGCTGAGGCAGACAATTGCTTGAACCCGAGAGACGGAGGGAGTTCTCGGTCACAGTaGAATATAGCATTTGCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: PATREAEADNCLNPRDGGSSRSQ*NIAFAV Trigger: TACTGCAAATGCTATATTGCACTGTGACCGAGAACT...CCCTCCGTCTCTCGGGTTCAAGCAATTGTCTGCCTCAGCCTCCCGAGTAGCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000370207.4 |
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| CDS-3UTR GCA 90 bp | CCAGCTACTCGGGAGGCTGAGGCAGACAATTGCTTGAACCCGAGAGACGGAGGGCTAAAGCATGTTATGTaGAAAAGGTGCCATGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PATREAEADNCLNPRDGGLKHVM*KRCHGV Trigger: AACACCATGGCACCTTTTGCACATAACATGCTTTAG...CCCTCCGTCTCTCGGGTTCAAGCAATTGTCTGCCTCAGCCTCCCGAGTAGCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000370207.4 |
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| CDS-3UTR CCA 90 bp | TTTGTTTTTGCTTGGACGACCTGGTTACTCCTTGAGTGCGGAATATATAATCTATGGCGCCCGTGGGGCTaGGGAGGTTGGGCTGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: FVFAWTTWLLLECGIYNLWRPWG*GGWAEG Trigger: GCCTTCAGCCCAACCTCCCCAGCCCCACGGGCGCCA...TAGATTATATATTCCGCACTCAAGGAGTAACCAGGTCGTCCAAGCAAAAACAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000334047.12 |
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| CDS-3UTR CCA 90 bp | TTTGTTTTTGCTTGGACGACCTGGTTACTCCTTGAGTGCGGAATATATAATCTAATCGAGCGGGTTCCGTaGCGCCCGTGGGGCTGGGGA | + |
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Preference number: 4 (lower is better) Translates to: FVFAWTTWLLLECGIYNLIERVP*RPWGWG Trigger: TCCCCAGCCCCACGGGCGCCACGGAACCCGCTCGAT...TAGATTATATATTCCGCACTCAAGGAGTAACCAGGTCGTCCAAGCAAAAACAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000334047.12 |
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| CDS-3UTR CCA 90 bp | TTTGTTTTTGCTTGGACGACCTGGTTACTCCTTGAGTGCGGAATATATAATCTAGAAGCGCCGGCCACCTaGGCGAAGACCCAGCCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: FVFAWTTWLLLECGIYNLEAPAT*AKTQPS Trigger: GCTCGGCTGGGTCTTCGCCCAGGTGGCCGGCGCTTC...TAGATTATATATTCCGCACTCAAGGAGTAACCAGGTCGTCCAAGCAAAAACAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000370207.4 |
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| CDS-3UTR TCA 90 bp | CCAGCTACTCGGGAGGCTGAGGCAGACAATTGCTTGAACCCGAGAGACGGAGGGATACCACAGCTCCAATaGTGTAGAATATTTCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: PATREAEADNCLNPRDGGIPQLQ*CRIFLS Trigger: GGAAAGAAATATTCTACATCATTGGAGCTGTGGTAT...CCCTCCGTCTCTCGGGTTCAAGCAATTGTCTGCCTCAGCCTCCCGAGTAGCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370207.4 |
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| CDS-3UTR GCA 90 bp | CCAGCTACTCGGGAGGCTGAGGCAGACAATTGCTTGAACCCGAGAGACGGAGGGTGGTTACTCCTTGAGTaGGGAATATATAATCTAAAG | + |
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Preference number: 4 (lower is better) Translates to: PATREAEADNCLNPRDGGWLLLE*GIYNLK Trigger: CTTTAGATTATATATTCCGCACTCAAGGAGTAACCA...CCCTCCGTCTCTCGGGTTCAAGCAATTGTCTGCCTCAGCCTCCCGAGTAGCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000370207.4 |
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| CDS-3UTR GCA 90 bp | GAACTCCAGGGTCTTCATGCTCCGAAATACTCATTTGCGTTTCCATGTATTCTACCGAGATCGTGCTACTaGACTCCAGCCTGGGCAACA | + |
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Preference number: 4 (lower is better) Translates to: ELQGLHAPKYSFAFPCILPRSCY*TPAWAT Trigger: TGTTGCCCAGGCTGGAGTGCAGTAGCACGATCTCGG...TAGAATACATGGAAACGCAAATGAGTATTTCGGAGCATGAAGACCCTGGAGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000370207.4 |
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| CDS-3UTR CCA 90 bp | AAAAGTTCTCGGTCACAGTGCAATATAGCATTTGCAGTAGCTCCAACAGTGCTTTCCATGTCTACCAGTTaGCGGCGAGATCGAGCGGGT | + |
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Preference number: 4 (lower is better) Translates to: KSSRSQCNIAFAVAPTVLSMSTS*RRDRAG Trigger: ACCCGCTCGATCTCGCCGCCAACTGGTAGACATGGA...AAGCACTGTTGGAGCTACTGCAAATGCTATATTGCACTGTGACCGAGAACTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334047.12 |
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| CDS-3UTR GCA 90 bp | TTACTCCTTGAGTGCGGAATATATAATCTAAAGCATGTTATGTGCAAAAGGTGCCCCCAGCAGAACCGGTaGTCTCCACATTCCCTGCCG | + |
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Preference number: 4 (lower is better) Translates to: LLLECGIYNLKHVMCKRCPQQNR*SPHSLP Trigger: CGGCAGGGAATGTGGAGAGCACCGGTTCTGCTGGGG...GCACCTTTTGCACATAACATGCTTTAGATTATATATTCCGCACTCAAGGAGTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000370207.4 |
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| CDS-3UTR GCA 90 bp | AAAAGTTCTCGGTCACAGTGCAATATAGCATTTGCAGTAGCTCCAACAGTGCTTGTAGGAGAAGACCCGTaGCAAGTACGTCTGCTTCAC | + |
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Preference number: 4 (lower is better) Translates to: KSSRSQCNIAFAVAPTVLVGEDP*QVRLLH Trigger: GTGAAGCAGACGTACTTGGCACGGGTCTTCTCCTAC...AAGCACTGTTGGAGCTACTGCAAATGCTATATTGCACTGTGACCGAGAACTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000370207.4 |
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| CDS-3UTR GCA 90 bp | GAACTCCAGGGTCTTCATGCTCCGAAATACTCATTTGCGTTTCCATGTATTCTAGTAGGAGAAGACCCGTaGCAAGTACGTCTGCTTCAC | + |
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Preference number: 4 (lower is better) Translates to: ELQGLHAPKYSFAFPCILVGEDP*QVRLLH Trigger: GTGAAGCAGACGTACTTGGCACGGGTCTTCTCCTAC...TAGAATACATGGAAACGCAAATGAGTATTTCGGAGCATGAAGACCCTGGAGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000370207.4 |
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| CDS-3UTR GCA 90 bp | TTACTCCTTGAGTGCGGAATATATAATCTAAAGCATGTTATGTGCAAAAGGTGCGCTCTCCACATTCCCTaGCGGGTAGGAGAAGACCCG | + |
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Preference number: 4 (lower is better) Translates to: LLLECGIYNLKHVMCKRCALHIP*RVGEDP Trigger: CGGGTCTTCTCCTACCCGGCAGGGAATGTGGAGAGC...GCACCTTTTGCACATAACATGCTTTAGATTATATATTCCGCACTCAAGGAGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000370207.4 |
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| CDS-3UTR GCA 90 bp | CCTCTTAAAAGTTCTCGGTCACAGTGCAATATAGCATTTGCAGTAGCTCCAACAGCTGAGGCAGACAATTaGTTGAACCCGAGAGACGGA | + |
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Preference number: 4 (lower is better) Translates to: PLKSSRSQCNIAFAVAPTAEADN*LNPRDG Trigger: TCCGTCTCTCGGGTTCAAGCAATTGTCTGCCTCAGC...TGTTGGAGCTACTGCAAATGCTATATTGCACTGTGACCGAGAACTTTTAAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000370207.4 |
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| CDS-3UTR CCA 90 bp | AAAAGTTCTCGGTCACAGTGCAATATAGCATTTGCAGTAGCTCCAACAGTGCTTAATTCCCCTTTCTCCTaGCCCATACACTCTACCGGG | + |
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Preference number: 4 (lower is better) Translates to: KSSRSQCNIAFAVAPTVLNSPFS*PIHSTG Trigger: CCCGGTAGAGTGTATGGGCCAGGAGAAAGGGGAATT...AAGCACTGTTGGAGCTACTGCAAATGCTATATTGCACTGTGACCGAGAACTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334047.12 |
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| CDS-3UTR CCA 90 bp | AAAAGTTCTCGGTCACAGTGCAATATAGCATTTGCAGTAGCTCCAACAGTGCTTTTTGCTTGGACGACCTaGTTACTCCTTGAGTGCGGA | + |
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Preference number: 4 (lower is better) Translates to: KSSRSQCNIAFAVAPTVLFAWTT*LLLECG Trigger: TCCGCACTCAAGGAGTAACCAGGTCGTCCAAGCAAA...AAGCACTGTTGGAGCTACTGCAAATGCTATATTGCACTGTGACCGAGAACTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000370207.4 |
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| CDS-3UTR TCA 90 bp | CCTCTTAAAAGTTCTCGGTCACAGTGCAATATAGCATTTGCAGTAGCTCCAACACTTTCCTACATGGATTaGAGTCAGCCCCTCAAAAGC | + |
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Preference number: 4 (lower is better) Translates to: PLKSSRSQCNIAFAVAPTLSYMD*SQPLKS Trigger: GCTTTTGAGGGGCTGACTTCAATCCATGTAGGAAAG...TGTTGGAGCTACTGCAAATGCTATATTGCACTGTGACCGAGAACTTTTAAGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000370207.4 |
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| CDS-3UTR TCA 90 bp | AAAAGTTCTCGGTCACAGTGCAATATAGCATTTGCAGTAGCTCCAACAGTGCTTCTTTCCTACATGGATTaGAGTCAGCCCCTCAAAAGC | + |
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Preference number: 4 (lower is better) Translates to: KSSRSQCNIAFAVAPTVLLSYMD*SQPLKS Trigger: GCTTTTGAGGGGCTGACTTCAATCCATGTAGGAAAG...AAGCACTGTTGGAGCTACTGCAAATGCTATATTGCACTGTGACCGAGAACTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000370207.4 |
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| CDS-3UTR GCA 90 bp | GAACTCCAGGGTCTTCATGCTCCGAAATACTCATTTGCGTTTCCATGTATTCTACGTGCCAAGTACGTCTaGTTCACATCCTTCACAATC | + |
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Preference number: 4 (lower is better) Translates to: ELQGLHAPKYSFAFPCILRAKYV*FTSFTI Trigger: GATTGTGAAGGATGTGAAGCAGACGTACTTGGCACG...TAGAATACATGGAAACGCAAATGAGTATTTCGGAGCATGAAGACCCTGGAGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000370207.4 |
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| CDS-3UTR GCA 90 bp | CCTCTTAAAAGTTCTCGGTCACAGTGCAATATAGCATTTGCAGTAGCTCCAACACGTGCCAAGTACGTCTaGTTCACATCCTTCACAATC | + |
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Preference number: 4 (lower is better) Translates to: PLKSSRSQCNIAFAVAPTRAKYV*FTSFTI Trigger: GATTGTGAAGGATGTGAAGCAGACGTACTTGGCACG...TGTTGGAGCTACTGCAAATGCTATATTGCACTGTGACCGAGAACTTTTAAGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000370207.4 |
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| CDS-3UTR GCA 90 bp | TTTGTTTTTGCTTGGACGACCTGGTTACTCCTTGAGTGCGGAATATATAATCTAGCTGAGGCAGACAATTaGTTGAACCCGAGAGACGGA | + |
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Preference number: 4 (lower is better) Translates to: FVFAWTTWLLLECGIYNLAEADN*LNPRDG Trigger: TCCGTCTCTCGGGTTCAAGCAATTGTCTGCCTCAGC...TAGATTATATATTCCGCACTCAAGGAGTAACCAGGTCGTCCAAGCAAAAACAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000370207.4 |
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| CDS-3UTR CCA 90 bp | CCTCTTAAAAGTTCTCGGTCACAGTGCAATATAGCATTTGCAGTAGCTCCAACAGTAAGGTGTGAACTCTaGGGAGTTCTCATACAGAGG | + |
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Preference number: 4 (lower is better) Translates to: PLKSSRSQCNIAFAVAPTVRCEL*GVLIQR Trigger: CCTCTGTATGAGAACTCCCCAGAGTTCACACCTTAC...TGTTGGAGCTACTGCAAATGCTATATTGCACTGTGACCGAGAACTTTTAAGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000370207.4 |
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| CDS-3UTR TCA 90 bp | TTTGTTTTTGCTTGGACGACCTGGTTACTCCTTGAGTGCGGAATATATAATCTACAGTGTAGACTTGATTaGCGGGTTTGGGTTCCCACT | + |
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Preference number: 4 (lower is better) Translates to: FVFAWTTWLLLECGIYNLQCRLD*RVWVPT Trigger: AGTGGGAACCCAAACCCGTCAATCAAGTCTACACTG...TAGATTATATATTCCGCACTCAAGGAGTAACCAGGTCGTCCAAGCAAAAACAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000370207.4 |
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| CDS-3UTR GCA 90 bp | CCTCTTAAAAGTTCTCGGTCACAGTGCAATATAGCATTTGCAGTAGCTCCAACAACTCCAGGGTCTTCATaGTCCGAAATACTCATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: PLKSSRSQCNIAFAVAPTTPGSS*SEILIC Trigger: GCAAATGAGTATTTCGGAGCATGAAGACCCTGGAGT...TGTTGGAGCTACTGCAAATGCTATATTGCACTGTGACCGAGAACTTTTAAGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000370207.4 |
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| CDS-3UTR CCA 90 bp | TTTGTTTTTGCTTGGACGACCTGGTTACTCCTTGAGTGCGGAATATATAATCTATTTGCTTGGACGACCTaGTTACTCCTTGAGTGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: FVFAWTTWLLLECGIYNLFAWTT*LLLECG Trigger: TCCGCACTCAAGGAGTAACCAGGTCGTCCAAGCAAA...TAGATTATATATTCCGCACTCAAGGAGTAACCAGGTCGTCCAAGCAAAAACAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000370207.4 |
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| CDS-3UTR TCA 90 bp | TTACTCCTTGAGTGCGGAATATATAATCTAAAGCATGTTATGTGCAAAAGGTGCCAGTGTAGACTTGATTaGCGGGTTTGGGTTCCCACT | + |
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Preference number: 4 (lower is better) Translates to: LLLECGIYNLKHVMCKRCQCRLD*RVWVPT Trigger: AGTGGGAACCCAAACCCGTCAATCAAGTCTACACTG...GCACCTTTTGCACATAACATGCTTTAGATTATATATTCCGCACTCAAGGAGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000370207.4 |
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| CDS-3UTR GCA 90 bp | CCTCTTAAAAGTTCTCGGTCACAGTGCAATATAGCATTTGCAGTAGCTCCAACAAGCATATTAGGAAGGTaGCCAGAATACCAATGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PLKSSRSQCNIAFAVAPTSILGR*PEYQCL Trigger: GAGACATTGGTATTCTGGGCACCTTCCTAATATGCT...TGTTGGAGCTACTGCAAATGCTATATTGCACTGTGACCGAGAACTTTTAAGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000370207.4 |
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| CDS-3UTR GCA 90 bp | GAACTCCAGGGTCTTCATGCTCCGAAATACTCATTTGCGTTTCCATGTATTCTAAGCATATTAGGAAGGTaGCCAGAATACCAATGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ELQGLHAPKYSFAFPCILSILGR*PEYQCL Trigger: GAGACATTGGTATTCTGGGCACCTTCCTAATATGCT...TAGAATACATGGAAACGCAAATGAGTATTTCGGAGCATGAAGACCCTGGAGTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000370207.4 |
||
| CDS-3UTR TCA 90 bp | AAAAGTTCTCGGTCACAGTGCAATATAGCATTTGCAGTAGCTCCAACAGTGCTTAAGTGTTGTTCCTTCTaGCTAAAGTCCGTTCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: KSSRSQCNIAFAVAPTVLKCCSF*LKSVHL Trigger: AAGATGAACGGACTTTAGTCAGAAGGAACAACACTT...AAGCACTGTTGGAGCTACTGCAAATGCTATATTGCACTGTGACCGAGAACTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000370207.4 |
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| CDS-3UTR GCA 90 bp | CCTCTTAAAAGTTCTCGGTCACAGTGCAATATAGCATTTGCAGTAGCTCCAACACTAAAGCATGTTATGTaGAAAAGGTGCCATGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PLKSSRSQCNIAFAVAPTLKHVM*KRCHGV Trigger: AACACCATGGCACCTTTTGCACATAACATGCTTTAG...TGTTGGAGCTACTGCAAATGCTATATTGCACTGTGACCGAGAACTTTTAAGAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000370207.4 |
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| CDS-3UTR CCA 90 bp | TTACTCCTTGAGTGCGGAATATATAATCTAAAGCATGTTATGTGCAAAAGGTGCGTAAGGTGTGAACTCTaGGGAGTTCTCATACAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLLECGIYNLKHVMCKRCVRCEL*GVLIQR Trigger: CCTCTGTATGAGAACTCCCCAGAGTTCACACCTTAC...GCACCTTTTGCACATAACATGCTTTAGATTATATATTCCGCACTCAAGGAGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000370207.4 |
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| CDS-3UTR TCA 90 bp | TTACTCCTTGAGTGCGGAATATATAATCTAAAGCATGTTATGTGCAAAAGGTGCTGTAGAATATTTCTCTaGATTCCCCTTTCTCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LLLECGIYNLKHVMCKRCCRIFL*IPLSPG Trigger: GCCAGGAGAAAGGGGAATTCAGAGAAATATTCTACA...GCACCTTTTGCACATAACATGCTTTAGATTATATATTCCGCACTCAAGGAGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334047.12 |
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| CDS-3UTR GCA 90 bp | CATGTATTCTATCCTCTTAAAAGTTCTCGGTCACAGTGCAATATAGCATTTGCAGTGCAATATAGCATTTaGAGTAGCTCCAACAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HVFYPLKSSRSQCNIAFAVQYSI*SSSNSA Trigger: AGCACTGTTGGAGCTACTGCAAATGCTATATTGCAC...TGCAAATGCTATATTGCACTGTGACCGAGAACTTTTAAGAGGATAGAATACATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000370207.4 |
||
| CDS-3UTR GCA 90 bp | TTTGTTTTTGCTTGGACGACCTGGTTACTCCTTGAGTGCGGAATATATAATCTAAGTTCTCGGTCACAGTaGAATATAGCATTTGCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: FVFAWTTWLLLECGIYNLSSRSQ*NIAFAV Trigger: TACTGCAAATGCTATATTGCACTGTGACCGAGAACT...TAGATTATATATTCCGCACTCAAGGAGTAACCAGGTCGTCCAAGCAAAAACAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000370207.4 |
||
| CDS-3UTR TCA 90 bp | CATGTATTCTATCCTCTTAAAAGTTCTCGGTCACAGTGCAATATAGCATTTGCAGCTTTTCCAATCTCCTaGCTTAGTGCTTATTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: HVFYPLKSSRSQCNIAFAAFPIS*LSAYLN Trigger: GTTCAAATAAGCACTAAGTCAGGAGATTGGAAAAGC...TGCAAATGCTATATTGCACTGTGACCGAGAACTTTTAAGAGGATAGAATACATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000370207.4 |
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| 3UTR CAA 72 bp | ATGCTAATGGTAATAACAGGTCATATCAAGAGTTTTTaGAACTCCAGGGTCTTCATGCTCCGAAATACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: MLMVITGHIKSF*NSRVFMLRNTH Trigger: ATGAGTATTTCGGAGCATGAAGACCCTGGAGTTCAAAAAACTCTTGATATGACCTGTTATTACCATTAGCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000370207.4 |
||
| CDS-3UTR GCA 90 bp | CATGTATTCTATCCTCTTAAAAGTTCTCGGTCACAGTGCAATATAGCATTTGCATGGTTACTCCTTGAGTaGGGAATATATAATCTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: HVFYPLKSSRSQCNIAFAWLLLE*GIYNLK Trigger: CTTTAGATTATATATTCCGCACTCAAGGAGTAACCA...TGCAAATGCTATATTGCACTGTGACCGAGAACTTTTAAGAGGATAGAATACATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000370207.4 |
||
| CDS CCA 90 bp | CCAGTTGGCGGCGAGATCGAGCGGGTTCCGTGGCGCCCGTGGGGCTaGGGAGGTTGGGCTGAAGGCGCCCTGGGCCGGCCAGAGGGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: PVGGEIERVPWRPWG*GGWAEGALGRPEGV Trigger: CACTCCCTCTGGCCGGCCCAGGGCGCCTTCAGCCCAACCTCCCCAGCCCCACGGGCGCCACGGAACCCGCTCGATCTCGCCGCCAACTGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000480356.1 |
||
| CDS CCA 90 bp | TGTCTACCAGTTGGCGGCGAGATCGAGCGGGTTCCGTGGCGCCCGTaGGGCTGGGGAGGTTGGGCTGAAGGCGCCCTGGGCCGGCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: CLPVGGEIERVPWRP*GWGGWAEGALGRPE Trigger: CTCTGGCCGGCCCAGGGCGCCTTCAGCCCAACCTCCCCAGCCCCACGGGCGCCACGGAACCCGCTCGATCTCGCCGCCAACTGGTAGACA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000480356.1 |
||
| CDS CCA 90 bp | GGGTCTCCATGTCTACCAGTTGGCGGCGAGATCGAGCGGGTTCCGTaGCGCCCGTGGGGCTGGGGAGGTTGGGCTGAAGGCGCCCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GSPCLPVGGEIERVP*RPWGWGGWAEGALG Trigger: GCCCAGGGCGCCTTCAGCCCAACCTCCCCAGCCCCACGGGCGCCACGGAACCCGCTCGATCTCGCCGCCAACTGGTAGACATGGAGACCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000480356.1 |
||
| CDS GCA 90 bp | CTCATACAGAGGCTCCCCAGCAGAACCGGTGCTCTCCACATTCCCTaGCGGGTAGGAGAAGACCCGTGCCAAGTACGTCTGCTTCACATC | + |
|
Preference number: 5 (lower is better) Translates to: LIQRLPSRTGALHIP*RVGEDPCQVRLLHI Trigger: GATGTGAAGCAGACGTACTTGGCACGGGTCTTCTCCTACCCGGCAGGGAATGTGGAGAGCACCGGTTCTGCTGGGGAGCCTCTGTATGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000334047.12 ENST00000370207.4 ENST00000478217.5 ENST00000480356.1 |
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| CDS GCA 90 bp | AGAACCGGTGCTCTCCACATTCCCTGCCGGGTAGGAGAAGACCCGTaGCAAGTACGTCTGCTTCACATCCTTCACAATCTCGTCGGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: RTGALHIPCRVGEDP*QVRLLHILHNLVGE Trigger: CTCACCGACGAGATTGTGAAGGATGTGAAGCAGACGTACTTGGCACGGGTCTTCTCCTACCCGGCAGGGAATGTGGAGAGCACCGGTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000334047.12 ENST00000370207.4 ENST00000478217.5 ENST00000480356.1 |
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| CDS-3UTR CAA 90 bp | CCAGCTACTCGGGAGGCTGAGGCAGACAATTGCTTGAACCCGAGAGACGGAGGGCCTGCCTTTCTACACTaGTGTAGAGATATAGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PATREAEADNCLNPRDGGPAFLH*CRDIAR Trigger: CCTGGCTATATCTCTACACAAGTGTAGAAAGGCAGG...CCCTCCGTCTCTCGGGTTCAAGCAATTGTCTGCCTCAGCCTCCCGAGTAGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000370207.4 |
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| CDS-3UTR CAA 90 bp | CCAGCTACTCGGGAGGCTGAGGCAGACAATTGCTTGAACCCGAGAGACGGAGGGCGACCTGGTTACTCCTaGAGTGCGGAATATATAATC | + |
|
Preference number: 5 (lower is better) Translates to: PATREAEADNCLNPRDGGRPGYS*SAEYII Trigger: GATTATATATTCCGCACTCAAGGAGTAACCAGGTCG...CCCTCCGTCTCTCGGGTTCAAGCAATTGTCTGCCTCAGCCTCCCGAGTAGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000370207.4 |
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| CDS GCA 90 bp | CGTCGGCTGTATTGGATCAGGATTATTTCTTATGAAGGTCTGCTTTaGCAGTACGCAGCAGGTCCCAGTCTCTACGCCGTCCCGAACACC | + |
|
Preference number: 5 (lower is better) Translates to: RRLYWIRIISYEGLL*QYAAGPSLYAVPNT Trigger: GGTGTTCGGGACGGCGTAGAGACTGGGACCTGCTGCGTACTGGCAAAGCAGACCTTCATAAGAAATAATCCTGATCCAATACAGCCGACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000480356.1 |
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| CDS GCA 90 bp | CACACCGTCGGCTGTATTGGATCAGGATTATTTCTTATGAAGGTCTaGTTTGCCAGTACGCAGCAGGTCCCAGTCTCTACGCCGTCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: HTVGCIGSGLFLMKV*FASTQQVPVSTPSR Trigger: TCGGGACGGCGTAGAGACTGGGACCTGCTGCGTACTGGCAAAGCAGACCTTCATAAGAAATAATCCTGATCCAATACAGCCGACGGTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000480356.1 |
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| CDS CCA 90 bp | CAGAGACCCACGGGGACGTGTGGCCTGTCACACCGTCGGCTGTATTaGATCAGGATTATTTCTTATGAAGGTCTGCTTTGCCAGTACGCA | + |
|
Preference number: 5 (lower is better) Translates to: QRPTGTCGLSHRRLY*IRIISYEGLLCQYA Trigger: TGCGTACTGGCAAAGCAGACCTTCATAAGAAATAATCCTGATCCAATACAGCCGACGGTGTGACAGGCCACACGTCCCCGTGGGTCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000480356.1 |
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| CDS TCA 90 bp | TGGCCTGTCACACCGTCGGCTGTATTGGATCAGGATTATTTCTTATaGAGGTCTGCTTTGCCAGTACGCAGCAGGTCCCAGTCTCTACGC | + |
|
Preference number: 5 (lower is better) Translates to: WPVTPSAVLDQDYFL*RSALPVRSRSQSLR Trigger: GCGTAGAGACTGGGACCTGCTGCGTACTGGCAAAGCAGACCTTCATAAGAAATAATCCTGATCCAATACAGCCGACGGTGTGACAGGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000480356.1 |
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| CDS GCA 90 bp | TCCCGAACACCTCGTAGAAATACGGGGCATGCACAACGTTGTACCTaGTCCAATCTAAGCAGCAATCCAGCCCTTTTGGATTGCCTCTAC | + |
|
Preference number: 5 (lower is better) Translates to: SRTPRRNTGHAQRCT*SNLSSNPALLDCLY Trigger: GTAGAGGCAATCCAAAAGGGCTGGATTGCTGCTTAGATTGGAGCAGGTACAACGTTGTGCATGCCCCGTATTTCTACGAGGTGTTCGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000480356.1 |
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| CDS-3UTR CAA 90 bp | AAAAGTTCTCGGTCACAGTGCAATATAGCATTTGCAGTAGCTCCAACAGTGCTTCTCCATGTCTACCAGTaGGCGGCGAGATCGAGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: KSSRSQCNIAFAVAPTVLLHVYQ*AARSSG Trigger: CCCGCTCGATCTCGCCGCCAACTGGTAGACATGGAG...AAGCACTGTTGGAGCTACTGCAAATGCTATATTGCACTGTGACCGAGAACTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334047.12 |
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| CDS CCA 90 bp | AAATGTCGCTACACTGAAACTTCCACAGAGACCCACGGGGACGTGTaGCCTGTCACACCGTCGGCTGTATTGGATCAGGATTATTTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: KCRYTETSTETHGDV*PVTPSAVLDQDYFL Trigger: TAAGAAATAATCCTGATCCAATACAGCCGACGGTGTGACAGGCCACACGTCCCCGTGGGTCTCTGTGGAAGTTTCAGTGTAGCGACATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000480356.1 |
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| CDS TCA 90 bp | CCCGTGCCAAGTACGTCTGCTTCACATCCTTCACAATCTCGTCGGTaGGGTCACACTCTGTGTCTGTTGTGTAAAAGCATTTGCTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: PVPSTSASHPSQSRR*GHTLCLLCKSICFS Trigger: GGAAAAGCAAATGCTTTTACACAACAGACACAGAGTGTGACCTCACCGACGAGATTGTGAAGGATGTGAAGCAGACGTACTTGGCACGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000334047.12 ENST00000370207.4 ENST00000478217.5 ENST00000480356.1 |
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| CDS GCA 90 bp | TGCTTCCTTTATGAAACATTCAGTGGGGAGTTCTCCTTCCAGCTCTaGCCCACTCCTGCCTTTCTACACTTGTGTAGAGATATAGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: CFLYETFSGEFSFQL*PTPAFLHLCRDIAR Trigger: CCTGGCTATATCTCTACACAAGTGTAGAAAGGCAGGAGTGGGGCAGAGCTGGAAGGAGAACTCCCCACTGAATGTTTCATAAAGGAAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000370207.4 |
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| CDS TCA 90 bp | ACATTTTCGTTTGAAATTATTCATGGGCAAAGCCTTGTTATAACTTaGCCGGGAAGAGCCCAGAGCCATCAGTGTGCCAGTCCAGGACTC | + |
|
Preference number: 5 (lower is better) Translates to: TFSFEIIHGQSLVIT*PGRAQSHQCASPGL Trigger: GAGTCCTGGACTGGCACACTGATGGCTCTGGGCTCTTCCCGGTCAAGTTATAACAAGGCTTTGCCCATGAATAATTTCAAACGAAAATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000480356.1 |
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| CDS CCA 90 bp | GGAAGAGTCAGGTTCAGCCCGCCAGGAAGGGTTTTCAGTAAGTTATaGAAAAAGATAAATCCCACACGTGTGACAAGAGTTAGGACTGCA | + |
|
Preference number: 5 (lower is better) Translates to: GRVRFSPPGRVFSKL*KKINPTRVTRVRTA Trigger: TGCAGTCCTAACTCTTGTCACACGTGTGGGATTTATCTTTTTCCATAACTTACTGAAAACCCTTCCTGGCGGGCTGAACCTGACTCTTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000480356.1 |
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| CDS TCA 90 bp | CCTTGCCAAAAACATCCCGGAGGCTTAGGAAAGTGTTGTTCCTTCTaGCTAAAGTCCGTTCATCTTCTACGGTCACATTCACTTTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: PCQKHPGGLGKCCSF*LKSVHLLRSHSLLF Trigger: GAACAAAAGTGAATGTGACCGTAGAAGATGAACGGACTTTAGTCAGAAGGAACAACACTTTCCTAAGCCTCCGGGATGTTTTTGGCAAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000334047.12 ENST00000370207.4 ENST00000478217.5 ENST00000480356.1 |
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| CDS-3UTR CAA 90 bp | CCTCTTAAAAGTTCTCGGTCACAGTGCAATATAGCATTTGCAGTAGCTCCAACATTGAACAGTGTAGACTaGATTGACGGGTTTGGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: PLKSSRSQCNIAFAVAPTLNSVD*IDGFGF Trigger: GAACCCAAACCCGTCAATCAAGTCTACACTGTTCAA...TGTTGGAGCTACTGCAAATGCTATATTGCACTGTGACCGAGAACTTTTAAGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000370207.4 |
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| CDS-3UTR CAA 90 bp | GAACTCCAGGGTCTTCATGCTCCGAAATACTCATTTGCGTTTCCATGTATTCTATTGAACAGTGTAGACTaGATTGACGGGTTTGGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: ELQGLHAPKYSFAFPCILLNSVD*IDGFGF Trigger: GAACCCAAACCCGTCAATCAAGTCTACACTGTTCAA...TAGAATACATGGAAACGCAAATGAGTATTTCGGAGCATGAAGACCCTGGAGTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000370207.4 |
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| CDS-3UTR CAA 90 bp | GAACTCCAGGGTCTTCATGCTCCGAAATACTCATTTGCGTTTCCATGTATTCTACGGTCACATTCACTTTaGTTCCCACCTGTTCAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: ELQGLHAPKYSFAFPCILRSHSL*FPPVQN Trigger: GTTTTGAACAGGTGGGAACAAAAGTGAATGTGACCG...TAGAATACATGGAAACGCAAATGAGTATTTCGGAGCATGAAGACCCTGGAGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000370207.4 |
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| CDS-3UTR CAA 90 bp | GAACTCCAGGGTCTTCATGCTCCGAAATACTCATTTGCGTTTCCATGTATTCTAACTTTCCTACATGGATaGAAGTCAGCCCCTCAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: ELQGLHAPKYSFAFPCILTFLHG*KSAPQK Trigger: CTTTTGAGGGGCTGACTTCAATCCATGTAGGAAAGT...TAGAATACATGGAAACGCAAATGAGTATTTCGGAGCATGAAGACCCTGGAGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000370207.4 |
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| CDS-3UTR CAA 90 bp | AAAAGTTCTCGGTCACAGTGCAATATAGCATTTGCAGTAGCTCCAACAGTGCTTACTTTCCTACATGGATaGAAGTCAGCCCCTCAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: KSSRSQCNIAFAVAPTVLTFLHG*KSAPQK Trigger: CTTTTGAGGGGCTGACTTCAATCCATGTAGGAAAGT...AAGCACTGTTGGAGCTACTGCAAATGCTATATTGCACTGTGACCGAGAACTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000370207.4 |
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| CDS-3UTR CAA 90 bp | AAAAGTTCTCGGTCACAGTGCAATATAGCATTTGCAGTAGCTCCAACAGTGCTTCACACTCTGTGTCTGTaGTGTAAAAGCATTTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: KSSRSQCNIAFAVAPTVLHTLCL*CKSICF Trigger: AAAGCAAATGCTTTTACACAACAGACACAGAGTGTG...AAGCACTGTTGGAGCTACTGCAAATGCTATATTGCACTGTGACCGAGAACTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000370207.4 |
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| CDS-3UTR CAA 90 bp | GAACTCCAGGGTCTTCATGCTCCGAAATACTCATTTGCGTTTCCATGTATTCTACACACTCTGTGTCTGTaGTGTAAAAGCATTTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: ELQGLHAPKYSFAFPCILHTLCL*CKSICF Trigger: AAAGCAAATGCTTTTACACAACAGACACAGAGTGTG...TAGAATACATGGAAACGCAAATGAGTATTTCGGAGCATGAAGACCCTGGAGTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000370207.4 |
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| CDS-3UTR CAA 90 bp | TTACTCCTTGAGTGCGGAATATATAATCTAAAGCATGTTATGTGCAAAAGGTGCCCTGCCTTTCTACACTaGTGTAGAGATATAGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LLLECGIYNLKHVMCKRCPAFLH*CRDIAR Trigger: CCTGGCTATATCTCTACACAAGTGTAGAAAGGCAGG...GCACCTTTTGCACATAACATGCTTTAGATTATATATTCCGCACTCAAGGAGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000370207.4 |
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| CDS-3UTR CAA 90 bp | TTTGTTTTTGCTTGGACGACCTGGTTACTCCTTGAGTGCGGAATATATAATCTACGACCTGGTTACTCCTaGAGTGCGGAATATATAATC | + |
|
Preference number: 5 (lower is better) Translates to: FVFAWTTWLLLECGIYNLRPGYS*SAEYII Trigger: GATTATATATTCCGCACTCAAGGAGTAACCAGGTCG...TAGATTATATATTCCGCACTCAAGGAGTAACCAGGTCGTCCAAGCAAAAACAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000370207.4 |
||
| CDS-3UTR CAA 90 bp | TTTGTTTTTGCTTGGACGACCTGGTTACTCCTTGAGTGCGGAATATATAATCTACATATCAAGAGTTTTTaGAACTCCAGGGTCTTCATG | + |
|
Preference number: 5 (lower is better) Translates to: FVFAWTTWLLLECGIYNLHIKSF*NSRVFM Trigger: CATGAAGACCCTGGAGTTCAAAAAACTCTTGATATG...TAGATTATATATTCCGCACTCAAGGAGTAACCAGGTCGTCCAAGCAAAAACAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000370207.4 |
||
| CDS-3UTR CAA 90 bp | TTACTCCTTGAGTGCGGAATATATAATCTAAAGCATGTTATGTGCAAAAGGTGCAAGACATTTTCCCATTaGTTTTTGCTTGGACGACCT | + |
|
Preference number: 5 (lower is better) Translates to: LLLECGIYNLKHVMCKRCKTFSH*FLLGRP Trigger: AGGTCGTCCAAGCAAAAACAAATGGGAAAATGTCTT...GCACCTTTTGCACATAACATGCTTTAGATTATATATTCCGCACTCAAGGAGTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000370207.4 |
||
| CDS CCA 72 bp | GGCGAGATCGAGCGGGTTCCGTGGCGCCCGTGGGGCTaGGGAGGTTGGGCTGAAGGCGCCCTGGGCCGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: GEIERVPWRPWG*GGWAEGALGRP Trigger: TGGCCGGCCCAGGGCGCCTTCAGCCCAACCTCCCCAGCCCCACGGGCGCCACGGAACCCGCTCGATCTCGCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000480356.1 |
||
| CDS CCA 72 bp | ACCCGGGGCCAGGCAGGGGTCTCCATGTCTACCAGTTaGCGGCGAGATCGAGCGGGTTCCGTGGCGCCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: TRGQAGVSMSTS*RRDRAGSVAPV Trigger: CACGGGCGCCACGGAACCCGCTCGATCTCGCCGCCAACTGGTAGACATGGAGACCCCTGCCTGGCCCCGGGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000480356.1 |
||
| CDS CAA 72 bp | GACCCGGGGCCAGGCAGGGGTCTCCATGTCTACCAGTaGGCGGCGAGATCGAGCGGGTTCCGTGGCGCCCGT | + |
|
Preference number: 6 (lower is better) Translates to: DPGPGRGLHVYQ*AARSSGFRGAR Trigger: ACGGGCGCCACGGAACCCGCTCGATCTCGCCGCCAACTGGTAGACATGGAGACCCCTGCCTGGCCCCGGGTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000480356.1 |
||
| CDS CCA 72 bp | GGATTGCCTCTACCCAAACCTGAAGCGCCGGCCACCTaGGCGAAGACCCAGCCGAGCAGGAGCGTCCGAGCG | + |
|
Preference number: 6 (lower is better) Translates to: GLPLPKPEAPAT*AKTQPSRSVRA Trigger: CGCTCGGACGCTCCTGCTCGGCTGGGTCTTCGCCCAGGTGGCCGGCGCTTCAGGTTTGGGTAGAGGCAATCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000480356.1 |
||
| CDS CCA 72 bp | GCCACAGTATTTGTAGTGCCTGAAGCGCCGGCCACCTaGGCGAAGACCCAGCCGAGCAGGAGCGTCCGAGCG | + |
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Preference number: 6 (lower is better) Translates to: ATVFVVPEAPAT*AKTQPSRSVRA Trigger: CGCTCGGACGCTCCTGCTCGGCTGGGTCTTCGCCCAGGTGGCCGGCGCTTCAGGCACTACAAATACTGTGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000370207.4 |
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| CDS GCA 72 bp | AGGCTCCCCAGCAGAACCGGTGCTCTCCACATTCCCTaGCGGGTAGGAGAAGACCCGTGCCAAGTACGTCTG | + |
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Preference number: 6 (lower is better) Translates to: RLPSRTGALHIP*RVGEDPCQVRL Trigger: CAGACGTACTTGGCACGGGTCTTCTCCTACCCGGCAGGGAATGTGGAGAGCACCGGTTCTGCTGGGGAGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000334047.12 ENST00000370207.4 ENST00000478217.5 ENST00000480356.1 |
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| CDS GCA 72 bp | GGGAGTTCTCATACAGAGGCTCCCCAGCAGAACCGGTaGTCTCCACATTCCCTGCCGGGTAGGAGAAGACCC | + |
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Preference number: 6 (lower is better) Translates to: GSSHTEAPQQNR*SPHSLPGRRRP Trigger: GGGTCTTCTCCTACCCGGCAGGGAATGTGGAGAGCACCGGTTCTGCTGGGGAGCCTCTGTATGAGAACTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000334047.12 ENST00000370207.4 ENST00000478217.5 ENST00000480356.1 |
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| CDS GCA 72 bp | TGCTCCAATCTAAGCAGCAATCCAGCCCTTTTGGATTaGCTCTACCCAAACCTGAAGCGCCGGCCACCTGGG | + |
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Preference number: 6 (lower is better) Translates to: CSNLSSNPALLD*LYPNLKRRPPG Trigger: CCCAGGTGGCCGGCGCTTCAGGTTTGGGTAGAGGCAATCCAAAAGGGCTGGATTGCTGCTTAGATTGGAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000480356.1 |
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| CDS CAA 72 bp | CTGCTCCAATCTAAGCAGCAATCCAGCCCTTTTGGATaGCCTCTACCCAAACCTGAAGCGCCGGCCACCTGG | + |
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Preference number: 6 (lower is better) Translates to: LLQSKQQSSPFG*PLPKPEAPATW Trigger: CCAGGTGGCCGGCGCTTCAGGTTTGGGTAGAGGCAATCCAAAAGGGCTGGATTGCTGCTTAGATTGGAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000480356.1 |
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| CDS GCA 72 bp | GCTCTCCACATTCCCTGCCGGGTAGGAGAAGACCCGTaGCAAGTACGTCTGCTTCACATCCTTCACAATCTC | + |
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Preference number: 6 (lower is better) Translates to: ALHIPCRVGEDP*QVRLLHILHNL Trigger: GAGATTGTGAAGGATGTGAAGCAGACGTACTTGGCACGGGTCTTCTCCTACCCGGCAGGGAATGTGGAGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000334047.12 ENST00000370207.4 ENST00000478217.5 ENST00000480356.1 |
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| CDS CCA 72 bp | TACACTGAAACTTCCACAGAGACCCACGGGGACGTGTaGCCTGTCACACCGTCGGCTGTATTGGATCAGGAT | + |
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Preference number: 6 (lower is better) Translates to: YTETSTETHGDV*PVTPSAVLDQD Trigger: ATCCTGATCCAATACAGCCGACGGTGTGACAGGCCACACGTCCCCGTGGGTCTCTGTGGAAGTTTCAGTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000480356.1 |
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| CDS CAA 72 bp | TGTACCTGCTCCAATCTAAGCAGCAATCCAGCCCTTTaGGATTGCCTCTACCCAAACCTGAAGCGCCGGCCA | + |
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Preference number: 6 (lower is better) Translates to: CTCSNLSSNPAL*DCLYPNLKRRP Trigger: TGGCCGGCGCTTCAGGTTTGGGTAGAGGCAATCCAAAAGGGCTGGATTGCTGCTTAGATTGGAGCAGGTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000480356.1 |
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| CDS CCA 72 bp | ACGGGGACGTGTGGCCTGTCACACCGTCGGCTGTATTaGATCAGGATTATTTCTTATGAAGGTCTGCTTTGC | + |
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Preference number: 6 (lower is better) Translates to: TGTCGLSHRRLY*IRIISYEGLLC Trigger: GCAAAGCAGACCTTCATAAGAAATAATCCTGATCCAATACAGCCGACGGTGTGACAGGCCACACGTCCCCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000480356.1 |
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| CDS TCA 72 bp | ACACCGTCGGCTGTATTGGATCAGGATTATTTCTTATaGAGGTCTGCTTTGCCAGTACGCAGCAGGTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: TPSAVLDQDYFL*RSALPVRSRSQ Trigger: CTGGGACCTGCTGCGTACTGGCAAAGCAGACCTTCATAAGAAATAATCCTGATCCAATACAGCCGACGGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000480356.1 |
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| CDS GCA 72 bp | CCTCGTAGAAATACGGGGCATGCACAACGTTGTACCTaGTCCAATCTAAGCAGCAATCCAGCCCTTTTGGAT | + |
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Preference number: 6 (lower is better) Translates to: PRRNTGHAQRCT*SNLSSNPALLD Trigger: ATCCAAAAGGGCTGGATTGCTGCTTAGATTGGAGCAGGTACAACGTTGTGCATGCCCCGTATTTCTACGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000480356.1 |
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| CDS GCA 72 bp | TATGAAACATTCAGTGGGGAGTTCTCCTTCCAGCTCTaGCCCACTCCTGCCTTTCTACACTTGTGTAGAGAT | + |
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Preference number: 6 (lower is better) Translates to: YETFSGEFSFQL*PTPAFLHLCRD Trigger: ATCTCTACACAAGTGTAGAAAGGCAGGAGTGGGGCAGAGCTGGAAGGAGAACTCCCCACTGAATGTTTCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334047.12 ENST00000370207.4 |
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| CDS GCA 72 bp | TATTGGATCAGGATTATTTCTTATGAAGGTCTGCTTTaGCAGTACGCAGCAGGTCCCAGTCTCTACGCCGTC | + |
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Preference number: 6 (lower is better) Translates to: YWIRIISYEGLL*QYAAGPSLYAV Trigger: GACGGCGTAGAGACTGGGACCTGCTGCGTACTGGCAAAGCAGACCTTCATAAGAAATAATCCTGATCCAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000480356.1 |
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| CDS GCA 72 bp | GGCTGTATTGGATCAGGATTATTTCTTATGAAGGTCTaGTTTGCCAGTACGCAGCAGGTCCCAGTCTCTACG | + |
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Preference number: 6 (lower is better) Translates to: GCIGSGLFLMKV*FASTQQVPVST Trigger: CGTAGAGACTGGGACCTGCTGCGTACTGGCAAAGCAGACCTTCATAAGAAATAATCCTGATCCAATACAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000480356.1 |
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| CDS TCA 72 bp | AGTACGTCTGCTTCACATCCTTCACAATCTCGTCGGTaGGGTCACACTCTGTGTCTGTTGTGTAAAAGCATT | + |
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Preference number: 6 (lower is better) Translates to: STSASHPSQSRR*GHTLCLLCKSI Trigger: AATGCTTTTACACAACAGACACAGAGTGTGACCTCACCGACGAGATTGTGAAGGATGTGAAGCAGACGTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000334047.12 ENST00000370207.4 ENST00000478217.5 ENST00000480356.1 |
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| CDS TCA 72 bp | TTTGAAATTATTCATGGGCAAAGCCTTGTTATAACTTaGCCGGGAAGAGCCCAGAGCCATCAGTGTGCCAGT | + |
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Preference number: 6 (lower is better) Translates to: FEIIHGQSLVIT*PGRAQSHQCAS Trigger: ACTGGCACACTGATGGCTCTGGGCTCTTCCCGGTCAAGTTATAACAAGGCTTTGCCCATGAATAATTTCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000480356.1 |
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| CDS CAA 72 bp | TCCTTGCCAAAAACATCCCGGAGGCTTAGGAAAGTGTaGTTCCTTCTGACTAAAGTCCGTTCATCTTCTACG | + |
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Preference number: 6 (lower is better) Translates to: SLPKTSRRLRKV*FLLTKVRSSST Trigger: CGTAGAAGATGAACGGACTTTAGTCAGAAGGAACAACACTTTCCTAAGCCTCCGGGATGTTTTTGGCAAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000334047.12 ENST00000370207.4 ENST00000478217.5 ENST00000480356.1 |
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| CDS TCA 72 bp | AAACATCCCGGAGGCTTAGGAAAGTGTTGTTCCTTCTaGCTAAAGTCCGTTCATCTTCTACGGTCACATTCA | + |
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Preference number: 6 (lower is better) Translates to: KHPGGLGKCCSF*LKSVHLLRSHS Trigger: TGAATGTGACCGTAGAAGATGAACGGACTTTAGTCAGAAGGAACAACACTTTCCTAAGCCTCCGGGATGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000334047.12 ENST00000370207.4 ENST00000478217.5 ENST00000480356.1 |
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| CDS CAA 72 bp | GTAGTGCCTTGTAATCCCAGGACACCGGCAAGGATCTaGACATTTTCGTTTGAAATTATTCATGGGCAAAGC | + |
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Preference number: 6 (lower is better) Translates to: VVPCNPRTPARI*TFSFEIIHGQS Trigger: GCTTTGCCCATGAATAATTTCAAACGAAAATGTCAAGATCCTTGCCGGTGTCCTGGGATTACAAGGCACTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000480356.1 |
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| CDS TCA 72 bp | TCCCAGGACACCGGCAAGGATCTTGACATTTTCGTTTaGAATTATTCATGGGCAAAGCCTTGTTATAACTTG | + |
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Preference number: 6 (lower is better) Translates to: SQDTGKDLDIFV*NYSWAKPCYNL Trigger: CAAGTTATAACAAGGCTTTGCCCATGAATAATTTCAAACGAAAATGTCAAGATCCTTGCCGGTGTCCTGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000480356.1 |
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| CDS CAA 90 bp | ACAGTATTTGTAGTGCCTTGTAATCCCAGGACACCGGCAAGGATCTaGACATTTTCGTTTGAAATTATTCATGGGCAAAGCCTTGTTATA | + |
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Preference number: 6 (lower is better) Translates to: TVFVVPCNPRTPARI*TFSFEIIHGQSLVI Trigger: TATAACAAGGCTTTGCCCATGAATAATTTCAAACGAAAATGTCAAGATCCTTGCCGGTGTCCTGGGATTACAAGGCACTACAAATACTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000480356.1 |
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