RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for F12 (Homo sapiens)

Ensembl gene IDs: ENSG00000131187

Ensembl transcript IDs: ENST00000253496.4, ENST00000502854.5, ENST00000503736.1, ENST00000504406.5, ENST00000510358.5, ENST00000514943.1

Found 193 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGTTCCTGCGCCATCCTGGCGCGGAGCTGGCCGCACTGGGGGAATaGGACACAATCTTGCCTTCCATGCCCCAGCCACTCTCTCACTGC +
Preference number: 1 (lower is better)
Translates to: EFLRHPGAELAALGE*DTILPSMPQPLSHC
Trigger: GCAGTGAGAGAGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCCCCCAGTGCGGCCAGCTCCGCGCCAGGATGGCGCAGGAACTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253496.4
3UTR CCA 90 bp ACTTTATTGAGTTCCTGCGCCATCCTGGCGCGGAGCTGGCCGCACTaGGGGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCACTCT +
Preference number: 1 (lower is better)
Translates to: TLLSSCAILARSWPH*GNGTQSCLPCPSHS
Trigger: AGAGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCCCCCAGTGCGGCCAGCTCCGCGCCAGGATGGCGCAGGAACTCAATAAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253496.4
3UTR CCA 90 bp TTTCAAAGCACTTTATTGAGTTCCTGCGCCATCCTGGCGCGGAGCTaGCCGCACTGGGGGAATGGGACACAATCTTGCCTTCCATGCCCC +
Preference number: 1 (lower is better)
Translates to: FQSTLLSSCAILARS*PHWGNGTQSCLPCP
Trigger: GGGGCATGGAAGGCAAGATTGTGTCCCATTCCCCCAGTGCGGCCAGCTCCGCGCCAGGATGGCGCAGGAACTCAATAAAGTGCTTTGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253496.4
3UTR CCA 72 bp CGCCATCCTGGCGCGGAGCTGGCCGCACTGGGGGAATaGGACACAATCTTGCCTTCCATGCCCCAGCCACTC +
Preference number: 3 (lower is better)
Translates to: RHPGAELAALGE*DTILPSMPQPL
Trigger: GAGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCCCCCAGTGCGGCCAGCTCCGCGCCAGGATGGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253496.4
3UTR CCA 72 bp AGTTCCTGCGCCATCCTGGCGCGGAGCTGGCCGCACTaGGGGAATGGGACACAATCTTGCCTTCCATGCCCC +
Preference number: 3 (lower is better)
Translates to: SSCAILARSWPH*GNGTQSCLPCP
Trigger: GGGGCATGGAAGGCAAGATTGTGTCCCATTCCCCCAGTGCGGCCAGCTCCGCGCCAGGATGGCGCAGGAACT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253496.4
3UTR CCA 72 bp ACTTTATTGAGTTCCTGCGCCATCCTGGCGCGGAGCTaGCCGCACTGGGGGAATGGGACACAATCTTGCCTT +
Preference number: 3 (lower is better)
Translates to: TLLSSCAILARS*PHWGNGTQSCL
Trigger: AAGGCAAGATTGTGTCCCATTCCCCCAGTGCGGCCAGCTCCGCGCCAGGATGGCGCAGGAACTCAATAAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR TCA 90 bp ACTTTATTGAGTTCCTGCGCCATCCTGGCGCGGAGCTGGCCGCACTGGGGGAATCCCGGGGTCTGGGACTaGGGCGGGGTCCGGGTCGTG +
Preference number: 4 (lower is better)
Translates to: TLLSSCAILARSWPHWGNPGVWD*GGVRVV
Trigger: CACGACCCGGACCCCGCCTCAGTCCCAGACCCCGGG...ATTCCCCCAGTGCGGCCAGCTCCGCGCCAGGATGGCGCAGGAACTCAATAAAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CCA 90 bp AGCTGGCCGCACTGGGGGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCACTCCGCCCCCTCGAACTaGTGGCCCCAGCCGGCCACC +
Preference number: 4 (lower is better)
Translates to: SWPHWGNGTQSCLPCPSHSAPSN*WPQPAT
Trigger: GGTGGCCGGCTGGGGCCACCAGTTCGAGGGGGCGGA...GTGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCCCCCAGTGCGGCCAGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR TCA 90 bp AGCTGGCCGCACTGGGGGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCACCCAGGCCGCGGTAGCTaGGCCCGCGGCCATCATAGC +
Preference number: 4 (lower is better)
Translates to: SWPHWGNGTQSCLPCPSHPGRGS*ARGHHS
Trigger: GCTATGATGGCCGCGGGCTCAGCTACCGCGGCCTGG...GTGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCCCCCAGTGCGGCCAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CCA 90 bp GCTGGCCGCACTGGGGGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCACTTGGCTGGCCAGCCGCTaGCAGTGGGCATCAGGACCC +
Preference number: 4 (lower is better)
Translates to: AGRTGGMGHNLAFHAPATWLASR*QWASGP
Trigger: GGGTCCTGATGCCCACTGCCAGCGGCTGGCCAGCCA...AGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCCCCCAGTGCGGCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CCA 90 bp ACTTTATTGAGTTCCTGCGCCATCCTGGCGCGGAGCTGGCCGCACTGGGGGAATTTGGTGCGGCAGGCCTaGCTGGCCAGCCGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: TLLSSCAILARSWPHWGNLVRQA*LASRWQ
Trigger: CTGCCAGCGGCTGGCCAGCCAGGCCTGCCGCACCAA...ATTCCCCCAGTGCGGCCAGCTCCGCGCCAGGATGGCGCAGGAACTCAATAAAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CCA 90 bp GCCGCACTGGGGGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCACTCTCTTCGCGCGGCGCCGCTTaGCAGGCACACCGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: AALGEWDTILPSMPQPLSSRGAA*QAHRLN
Trigger: GTTCAGCCGGTGTGCCTGCCAAGCGGCGCCGCGCGA...AGAGAGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCCCCCAGTGCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CCA 90 bp ACTTTATTGAGTTCCTGCGCCATCCTGGCGCGGAGCTGGCCGCACTGGGGGAATCCCCAGCCGGCCACCTaGCAGAGCGTGGTCTCGGAG +
Preference number: 4 (lower is better)
Translates to: TLLSSCAILARSWPHWGNPQPAT*QSVVSE
Trigger: CTCCGAGACCACGCTCTGCCAGGTGGCCGGCTGGGG...ATTCCCCCAGTGCGGCCAGCTCCGCGCCAGGATGGCGCAGGAACTCAATAAAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR TCA 90 bp GGGACACAATCTTGCCTTCCATGCCCCAGCCACTCTCTCACTGCGGAATCACCATCCGAGGCCCACGGCTaGCAGGGCGCACCCGAGAGC +
Preference number: 4 (lower is better)
Translates to: GTQSCLPCPSHSLTAESPSEAHG*QGAPES
Trigger: GCTCTCGGGTGCGCCCTGTCAGCCGTGGGCCTCGGA...TGGTGATTCCGCAGTGAGAGAGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR TCA 90 bp GCTGGCCGCACTGGGGGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCACTCCGTCCGCATCCTCCTaGAGGCGCAACAGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: AGRTGGMGHNLAFHAPATPSASS*RRNRAR
Trigger: CCTGGCTCTGTTGCGCCTTCAGGAGGATGCGGACGG...AGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCCCCCAGTGCGGCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CCA 90 bp CAAAGCACTTTATTGAGTTCCTGCGCCATCCTGGCGCGGAGCTGGCCGCACTGGCATGGAGGCACGGGTTaGTGCGGCAGGCCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: QSTLLSSCAILARSWPHWHGGTG*CGRPGW
Trigger: CCAGCCAGGCCTGCCGCACCAACCCGTGCCTCCATG...CCAGTGCGGCCAGCTCCGCGCCAGGATGGCGCAGGAACTCAATAAAGTGCTTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CCA 90 bp CAAAGCACTTTATTGAGTTCCTGCGCCATCCTGGCGCGGAGCTGGCCGCACTGGAGGCAGCGACCCCCATaGAGGCACGGGTTGGTGCGG +
Preference number: 4 (lower is better)
Translates to: QSTLLSSCAILARSWPHWRQRPP*RHGLVR
Trigger: CCGCACCAACCCGTGCCTCCATGGGGGTCGCTGCCT...CCAGTGCGGCCAGCTCCGCGCCAGGATGGCGCAGGAACTCAATAAAGTGCTTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CCA 90 bp GGGACACAATCTTGCCTTCCATGCCCCAGCCACTCTCTCACTGCGGAATCACCAGCGCACCCGAGAGCGTaGTCCTGGCCAGGCCGCGGT +
Preference number: 4 (lower is better)
Translates to: GTQSCLPCPSHSLTAESPAHPRA*SWPGRG
Trigger: ACCGCGGCCTGGCCAGGACCACGCTCTCGGGTGCGC...TGGTGATTCCGCAGTGAGAGAGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CCA 90 bp GAGCTGGCCGCACTGGGGGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCAGCCTGGGTTGGGGTCTaGCACTGTGCCAGGTCGCAG +
Preference number: 4 (lower is better)
Translates to: ELAALGEWDTILPSMPQPAWVGV*HCARSQ
Trigger: CTGCGACCTGGCACAGTGCCAGACCCCAACCCAGGC...TGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCCCCCAGTGCGGCCAGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CCA 90 bp GCTGGCCGCACTGGGGGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCACTCTGCCCGCAGCTCAGTaGGCCGTTCCTGGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: AGRTGGMGHNLAFHAPATLPAAQ*AVPGQG
Trigger: TCCCTGACCAGGAACGGCCCACTGAGCTGCGGGCAG...AGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCCCCCAGTGCGGCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CCA 90 bp AGCTGGCCGCACTGGGGGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCACCGCACGGCCAACGTCTaGCACGGCTCACAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: SWPHWGNGTQSCLPCPSHRTANV*HGSQLW
Trigger: CCACAGCTGTGAGCCGTGCCAGACGTTGGCCGTGCG...GTGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCCCCCAGTGCGGCCAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CCA 90 bp GCCGCACTGGGGGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCACTCTCTCCTCCGGAATCACCCTaGCACGCATCGGTGCCGCCC +
Preference number: 4 (lower is better)
Translates to: AALGEWDTILPSMPQPLSPPESP*HASVPP
Trigger: GGGCGGCACCGATGCGTGCCAGGGTGATTCCGGAGG...AGAGAGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCCCCCAGTGCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR GCA 90 bp GCACTGGGGGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCACTCTCTCACCCTGGCACGCATCGGTaGCGCCCTCGAGGAACCCTG +
Preference number: 4 (lower is better)
Translates to: ALGEWDTILPSMPQPLSHPGTHR*RPRGTL
Trigger: CAGGGTTCCTCGAGGGCGGCACCGATGCGTGCCAGG...GTGAGAGAGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCCCCCAGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CCA 90 bp GAGCTGGCCGCACTGGGGGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCAAGCTGCCGGTGGTACTaGAAGGGGAAGTGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: ELAALGEWDTILPSMPQPSCRWY*KGKWQG
Trigger: GCCCTGCCACTTCCCCTTCCAGTACCACCGGCAGCT...TGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCCCCCAGTGCGGCCAGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CCA 90 bp GCCGCACTGGGGGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCACTCTCTCAGTGGCACAGGCGGTaGCCCTCCACCTCTAGGCAG +
Preference number: 4 (lower is better)
Translates to: AALGEWDTILPSMPQPLSQWHRR*PSTSRQ
Trigger: CTGCCTAGAGGTGGAGGGCCACCGCCTGTGCCACTG...AGAGAGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCCCCCAGTGCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CCA 90 bp GGGGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCACTCTCTCACTGCGGAGTCGGAGGCGCCGCCTaGGTTGGGGTCTGGCACTGT +
Preference number: 4 (lower is better)
Translates to: GEWDTILPSMPQPLSHCGVGGAA*VGVWHC
Trigger: ACAGTGCCAGACCCCAACCCAGGCGGCGCCTCCGAC...TCCGCAGTGAGAGAGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CCA 90 bp GAGCTGGCCGCACTGGGGGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCATCAGTGGGCCGTTCCTaGTCAGGGAAGGCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: ELAALGEWDTILPSMPQPSVGRS*SGKAAA
Trigger: AGCAGCCGCCTTCCCTGACCAGGAACGGCCCACTGA...TGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCCCCCAGTGCGGCCAGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CCA 90 bp GCACTGGGGGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCACTCTCTCACGTTCCTGCGCCATCCTaGCGCGGAGCTGGCCGCACT +
Preference number: 4 (lower is better)
Translates to: ALGEWDTILPSMPQPLSHVPAPS*RGAGRT
Trigger: AGTGCGGCCAGCTCCGCGCCAGGATGGCGCAGGAAC...GTGAGAGAGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCCCCCAGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR TCA 90 bp CAAAGCACTTTATTGAGTTCCTGCGCCATCCTGGCGCGGAGCTGGCCGCACTGGGGCATGAGTGGGACATaGAGCCTAGGGGACACCGGG +
Preference number: 4 (lower is better)
Translates to: QSTLLSSCAILARSWPHWGMSGT*SLGDTG
Trigger: CCCGGTGTCCCCTAGGCTTCATGTCCCACTCATGCC...CCAGTGCGGCCAGCTCCGCGCCAGGATGGCGCAGGAACTCAATAAAGTGCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR TCA 90 bp GCATTTTCAAAGCACTTTATTGAGTTCCTGCGCCATCCTGGCGCGGAGCTGGCCCCCAGCAGGGGGCGATaGGGCTGCCGGCGCAGAAAC +
Preference number: 4 (lower is better)
Translates to: AFSKHFIEFLRHPGAELAPSRGR*GCRRRN
Trigger: GTTTCTGCGCCGGCAGCCTCATCGCCCCCTGCTGGG...GGCCAGCTCCGCGCCAGGATGGCGCAGGAACTCAATAAAGTGCTTTGAAAATGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR TCA 90 bp TCAAAGCACTTTATTGAGTTCCTGCGCCATCCTGGCGCGGAGCTGGCCGCACTGGGTCGTGCTGGTAGCTaGCGGGCGAGAAGGCCTCGT +
Preference number: 4 (lower is better)
Translates to: SKHFIEFLRHPGAELAALGRAGS*RARRPR
Trigger: ACGAGGCCTTCTCGCCCGTCAGCTACCAGCACGACC...CAGTGCGGCCAGCTCCGCGCCAGGATGGCGCAGGAACTCAATAAAGTGCTTTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR GCA 90 bp TCAAAGCACTTTATTGAGTTCCTGCGCCATCCTGGCGCGGAGCTGGCCGCACTGCCCCAGTTCCGCGCTTaGTCGGCAGTCACGTTCCGG +
Preference number: 4 (lower is better)
Translates to: SKHFIEFLRHPGAELAALPQFRA*SAVTFR
Trigger: CCGGAACGTGACTGCCGAGCAAGCGCGGAACTGGGG...CAGTGCGGCCAGCTCCGCGCCAGGATGGCGCAGGAACTCAATAAAGTGCTTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR GCA 90 bp GGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCACTCTCTCACTGCGGAATCTCTTGCGGAGCCGCTaGCCGCAGCTCAGTGGGCCG +
Preference number: 4 (lower is better)
Translates to: GMGHNLAFHAPATLSLRNLLRSR*PQLSGP
Trigger: CGGCCCACTGAGCTGCGGGCAGCGGCTCCGCAAGAG...ATTCCGCAGTGAGAGAGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR GCA 90 bp ACTTTATTGAGTTCCTGCGCCATCCTGGCGCGGAGCTGGCCGCACTGGGGGAATGGTGAGCCGGCGCTCTaGAGCTTGGTCCTCACACAC +
Preference number: 4 (lower is better)
Translates to: TLLSSCAILARSWPHWGNGEPAL*SLVLTH
Trigger: GTGTGTGAGGACCAAGCTGCAGAGCGCCGGCTCACC...ATTCCCCCAGTGCGGCCAGCTCCGCGCCAGGATGGCGCAGGAACTCAATAAAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CCA 90 bp GGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCACTCTCTCACTGCGGAATCCACCTGGCAGAGCGTaGTCTCGGAGGGTCGCGCGG +
Preference number: 4 (lower is better)
Translates to: GMGHNLAFHAPATLSLRNPPGRA*SRRVAR
Trigger: CCGCGCGACCCTCCGAGACCACGCTCTGCCAGGTGG...ATTCCGCAGTGAGAGAGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CCA 90 bp CTGGGGGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCACTCTCTCACTGCGCATGCCGGGGAGGATaGAGGATCCGTGCACGTCCG +
Preference number: 4 (lower is better)
Translates to: LGEWDTILPSMPQPLSHCACRGG*RIRARP
Trigger: CGGACGTGCACGGATCCTCCATCCTCCCCGGCATGC...GCAGTGAGAGAGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CCA 90 bp GCTGGCCGCACTGGGGGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCACTCGGAGCTGGCCGCACTaGGGGAATGGGACACAATCT +
Preference number: 4 (lower is better)
Translates to: AGRTGGMGHNLAFHAPATRSWPH*GNGTQS
Trigger: AGATTGTGTCCCATTCCCCCAGTGCGGCCAGCTCCG...AGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCCCCCAGTGCGGCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CCA 90 bp GGGACACAATCTTGCCTTCCATGCCCCAGCCACTCTCTCACTGCGGAATCACCAATCCTGGCGCGGAGCTaGCCGCACTGGGGGAATGGG +
Preference number: 4 (lower is better)
Translates to: GTQSCLPCPSHSLTAESPILARS*PHWGNG
Trigger: CCCATTCCCCCAGTGCGGCCAGCTCCGCGCCAGGAT...TGGTGATTCCGCAGTGAGAGAGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR GCA 90 bp TTTTCAAAGCACTTTATTGAGTTCCTGCGCCATCCTGGCGCGGAGCTGGCCGCAGTCAGGGAAGGCGGCTaGTCCCGCTTCGCCGGCAAG +
Preference number: 4 (lower is better)
Translates to: FSKHFIEFLRHPGAELAAVREGG*SRFAGK
Trigger: CTTGCCGGCGAAGCGGGAGCAGCCGCCTTCCCTGAC...TGCGGCCAGCTCCGCGCCAGGATGGCGCAGGAACTCAATAAAGTGCTTTGAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR GCA 90 bp TGGGGGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCACTCTCTCACTGCGTCGAAGACAGACTCTTaGGGAGCCGCTGCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: WGNGTQSCLPCPSHSLTASKTDS*GAAARS
Trigger: GCTGCGGGCAGCGGCTCCGCAAGAGTCTGTCTTCGA...CGCAGTGAGAGAGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR GCA 90 bp TGGGGGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCACTCTCTCACTGCGACAGGAGCGCGCAGCTaGCGTCCGCATCCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: WGNGTQSCLPCPSHSLTATGARS*RPHPPE
Trigger: TTCAGGAGGATGCGGACGGCAGCTGCGCGCTCCTGT...CGCAGTGAGAGAGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR GCA 90 bp CAAAGCACTTTATTGAGTTCCTGCGCCATCCTGGCGCGGAGCTGGCCGCACTGGGAGAGGAACGGTACCTaGGCCTCCTGCAGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: QSTLLSSCAILARSWPHWERNGT*ASCRKL
Trigger: CAGCTTCCTGCAGGAGGCGCAGGTACCGTTCCTCTC...CCAGTGCGGCCAGCTCCGCGCCAGGATGGCGCAGGAACTCAATAAAGTGCTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR GCA 90 bp TCAAAGCACTTTATTGAGTTCCTGCGCCATCCTGGCGCGGAGCTGGCCGCACTGAGGATGGAGGATCCGTaGACGTCCGGGGCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: SKHFIEFLRHPGAELAALRMEDP*TSGAEQ
Trigger: CTGCTCAGCCCCGGACGTGCACGGATCCTCCATCCT...CAGTGCGGCCAGCTCCGCGCCAGGATGGCGCAGGAACTCAATAAAGTGCTTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR GCA 90 bp GGGGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCACTCTCTCACTGCGGAACCCTGCGCAGAGCATaGCGGGGAGGATGGAGGATC +
Preference number: 4 (lower is better)
Translates to: GEWDTILPSMPQPLSHCGTLRRA*RGGWRI
Trigger: GATCCTCCATCCTCCCCGGCATGCTCTGCGCAGGGT...TCCGCAGTGAGAGAGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR GCA 90 bp TTTTCAAAGCACTTTATTGAGTTCCTGCGCCATCCTGGCGCGGAGCTGGCCGCAGCCCTCGAGGAACCCTaGGCAGAGCATGCCGGGGAG +
Preference number: 4 (lower is better)
Translates to: FSKHFIEFLRHPGAELAAALEEP*AEHAGE
Trigger: CTCCCCGGCATGCTCTGCGCAGGGTTCCTCGAGGGC...TGCGGCCAGCTCCGCGCCAGGATGGCGCAGGAACTCAATAAAGTGCTTTGAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR GCA 90 bp GGCCGCACTGGGGGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCACTCTCAATCAGGAAACGGTGTaGTCCCGGATCCAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GRTGGMGHNLAFHAPATLNQETV*SRIQAR
Trigger: CCTGGCCTGGATCCGGGAGCACACCGTTTCCTGATT...GAGAGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCCCCCAGTGCGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CCA 90 bp GCTGGCCGCACTGGGGGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCACTCCTGGCCGGCCCTTGTaGGTACATTTGTGGTACAGC +
Preference number: 4 (lower is better)
Translates to: AGRTGGMGHNLAFHAPATPGRPL*VHLWYS
Trigger: GCTGTACCACAAATGTACCCACAAGGGCCGGCCAGG...AGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCCCCCAGTGCGGCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CCA 90 bp GCATTTTCAAAGCACTTTATTGAGTTCCTGCGCCATCCTGGCGCGGAGCTGGCCCCAGGGCTGAGGGCCTaGCCGGCCCTTGTGGGTACA +
Preference number: 4 (lower is better)
Translates to: AFSKHFIEFLRHPGAELAPGLRA*PALVGT
Trigger: TGTACCCACAAGGGCCGGCCAGGCCCTCAGCCCTGG...GGCCAGCTCCGCGCCAGGATGGCGCAGGAACTCAATAAAGTGCTTTGAAAATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CCA 90 bp GCTGGCCGCACTGGGGGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCACTCCTTGCACTGGCATCTaGCCACAGCTGCTTGCTCAG +
Preference number: 4 (lower is better)
Translates to: AGRTGGMGHNLAFHAPATPCTGI*PQLLAQ
Trigger: CTGAGCAAGCAGCTGTGGCCAGATGCCAGTGCAAGG...AGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCCCCCAGTGCGGCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CCA 90 bp CACTGGGGGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCACTCTCTCACTTTCCGGCAGAAGGCGTaGCCGCCCAGTCCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: HWGNGTQSCLPCPSHSLTFRQKA*PPSPQF
Trigger: GAACTGGGGACTGGGCGGCCACGCCTTCTGCCGGAA...AGTGAGAGAGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCCCCCAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CCA 90 bp GGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCACTCTCTCACTGCGGAATCCGGCGCAGAAACTGTaGCCCCAGTACAGCGCGGCG +
Preference number: 4 (lower is better)
Translates to: GMGHNLAFHAPATLSLRNPAQKL*PQYSAA
Trigger: CGCCGCGCTGTACTGGGGCCACAGTTTCTGCGCCGG...ATTCCGCAGTGAGAGAGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CCA 90 bp ACTTTATTGAGTTCCTGCGCCATCCTGGCGCGGAGCTGGCCGCACTGGGGGAATTGGTTACGGCGTTCCTaGCCGAGCACCACCGTCAGA +
Preference number: 4 (lower is better)
Translates to: TLLSSCAILARSWPHWGNWLRRS*PSTTVR
Trigger: TCTGACGGTGGTGCTCGGCCAGGAACGCCGTAACCA...ATTCCCCCAGTGCGGCCAGCTCCGCGCCAGGATGGCGCAGGAACTCAATAAAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CCA 90 bp GCTGGCCGCACTGGGGGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCACTGCCGCACTGGGGGAATaGGACACAATCTTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: AGRTGGMGHNLAFHAPATAALGE*DTILPS
Trigger: GGAAGGCAAGATTGTGTCCCATTCCCCCAGTGCGGC...AGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCCCCCAGTGCGGCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR GCA 90 bp TGGGGGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCACTCTCTCACTGCGGGGCATCAGGACCCTTaGACTGGCATCTGGCCACAG +
Preference number: 4 (lower is better)
Translates to: WGNGTQSCLPCPSHSLTAGHQDP*TGIWPQ
Trigger: CTGTGGCCAGATGCCAGTGCAAGGGTCCTGATGCCC...CGCAGTGAGAGAGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR GCA 90 bp TCAAAGCACTTTATTGAGTTCCTGCGCCATCCTGGCGCGGAGCTGGCCGCACTGCAGCTGATGATGCCTTaGAGGGTGAGCCGGCGCTCT +
Preference number: 4 (lower is better)
Translates to: SKHFIEFLRHPGAELAALQLMMP*RVSRRS
Trigger: AGAGCGCCGGCTCACCCTGCAAGGCATCATCAGCTG...CAGTGCGGCCAGCTCCGCGCCAGGATGGCGCAGGAACTCAATAAAGTGCTTTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR GCA 90 bp CTGGGGGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCACTCTCTCACTGCAGACGCCTGGCTTGTTaGGGTCACCACAGCCCGATC +
Preference number: 4 (lower is better)
Translates to: LGEWDTILPSMPQPLSHCRRLAC*GHHSPI
Trigger: GATCGGGCTGTGGTGACCGCAACAAGCCAGGCGTCT...GCAGTGAGAGAGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCCCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR GCA 90 bp GCTGGCCGCACTGGGGGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCACTACTTTATTGAGTTCCTaGGCCATCCTGGCGCGGAGC +
Preference number: 4 (lower is better)
Translates to: AGRTGGMGHNLAFHAPATTLLSS*AILARS
Trigger: GCTCCGCGCCAGGATGGCGCAGGAACTCAATAAAGT...AGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCCCCCAGTGCGGCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CCA 90 bp CAAAGCACTTTATTGAGTTCCTGCGCCATCCTGGCGCGGAGCTGGCCGCACTGGATGGCATCCGTCCGTTaGTCCAGCTGCCTATCCAGG +
Preference number: 4 (lower is better)
Translates to: QSTLLSSCAILARSWPHWMASVR*SSCLSR
Trigger: CCTGGATAGGCAGCTGGACCAACGGACGGATGCCAT...CCAGTGCGGCCAGCTCCGCGCCAGGATGGCGCAGGAACTCAATAAAGTGCTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CCA 90 bp GCACTGGGGGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCACTCTCTCACGCAGCAGAGCCCTCATaGCATCCGTCCGTTGGTCCA +
Preference number: 4 (lower is better)
Translates to: ALGEWDTILPSMPQPLSHAAEPS*HPSVGP
Trigger: TGGACCAACGGACGGATGCCATGAGGGCTCTGCTGC...GTGAGAGAGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCCCCCAGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CCA 90 bp TGGGGGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCACTCTCTCACTGCGACAGTGGGGGCCGCTTaGCATGTTCACACAGGTCCC +
Preference number: 4 (lower is better)
Translates to: WGNGTQSCLPCPSHSLTATVGAA*HVHTGP
Trigger: GGGACCTGTGTGAACATGCCAAGCGGCCCCCACTGT...CGCAGTGAGAGAGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CCA 90 bp GGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCACTCTCTCACTGCGGAATTCACGTTCCGGTAGGTaGCCTCCGAGGCCCACGGCT +
Preference number: 4 (lower is better)
Translates to: GMGHNLAFHAPATLSLRNSRSGR*PPRPTA
Trigger: AGCCGTGGGCCTCGGAGGCCACCTACCGGAACGTGA...ATTCCGCAGTGAGAGAGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CCA 90 bp TCAAAGCACTTTATTGAGTTCCTGCGCCATCCTGGCGCGGAGCTGGCCGCACTGCTGCGCGGGCATGAGTaGGACATGAAGCCTAGGGGA +
Preference number: 4 (lower is better)
Translates to: SKHFIEFLRHPGAELAALLRGHE*DMKPRG
Trigger: TCCCCTAGGCTTCATGTCCCACTCATGCCCGCGCAG...CAGTGCGGCCAGCTCCGCGCCAGGATGGCGCAGGAACTCAATAAAGTGCTTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CCA 90 bp GGGACACAATCTTGCCTTCCATGCCCCAGCCACTCTCTCACTGCGGAATCACCACACGGCTCACAGCTGTaGTTACGGCGTTCCTGGCCG +
Preference number: 4 (lower is better)
Translates to: GTQSCLPCPSHSLTAESPHGSQL*LRRSWP
Trigger: CGGCCAGGAACGCCGTAACCACAGCTGTGAGCCGTG...TGGTGATTCCGCAGTGAGAGAGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR GCA 90 bp TGGGGGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCACTCTCTCACTGCGGGTACCTGCGCCTCCTaGAGGAAGCTGGCATATTCC +
Preference number: 4 (lower is better)
Translates to: WGNGTQSCLPCPSHSLTAGTCAS*RKLAYS
Trigger: GGAATATGCCAGCTTCCTGCAGGAGGCGCAGGTACC...CGCAGTGAGAGAGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR GCA 90 bp GCTGGCCGCACTGGGGGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCACTCAATCTTGCCTTCCATaGCCCAGCCACTCTCTCACT +
Preference number: 4 (lower is better)
Translates to: AGRTGGMGHNLAFHAPATQSCLP*PSHSLT
Trigger: AGTGAGAGAGTGGCTGGGGCATGGAAGGCAAGATTG...AGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCCCCCAGTGCGGCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CCA 90 bp TCAAAGCACTTTATTGAGTTCCTGCGCCATCCTGGCGCGGAGCTGGCCGCACTGTGGTACAGCTGCCGGTaGTACTGGAAGGGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: SKHFIEFLRHPGAELAALWYSCR*YWKGKW
Trigger: CCACTTCCCCTTCCAGTACCACCGGCAGCTGTACCA...CAGTGCGGCCAGCTCCGCGCCAGGATGGCGCAGGAACTCAATAAAGTGCTTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CCA 90 bp TGGGGGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCACTCTCTCACTGCGTCCAGTGAGGTGTTGTaGACAGAGACAGTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: WGNGTQSCLPCPSHSLTASSEVL*TETVGA
Trigger: GGCCCCCACTGTCTCTGTCCACAACACCTCACTGGA...CGCAGTGAGAGAGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CCA 90 bp CAAAGCACTTTATTGAGTTCCTGCGCCATCCTGGCGCGGAGCTGGCCGCACTGGCATAGCAGCTTGCCTTaGTGTCCACGTCGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: QSTLLSSCAILARSWPHWHSSLP*CPRRRR
Trigger: CCTTCTGCGACGTGGACACCAAGGCAAGCTGCTATG...CCAGTGCGGCCAGCTCCGCGCCAGGATGGCGCAGGAACTCAATAAAGTGCTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CCA 90 bp GCCGCACTGGGGGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCACTCTCTATCGGTGTAGACGCCTaGCTTGTTGCGGTCACCACA +
Preference number: 4 (lower is better)
Translates to: AALGEWDTILPSMPQPLSIGVDA*LVAVTT
Trigger: TGTGGTGACCGCAACAAGCCAGGCGTCTACACCGAT...AGAGAGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCCCCCAGTGCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR TCA 90 bp AGCTGGCCGCACTGGGGGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCACGGAAAGATGAGTCCCTaGGCAATCAGGAAACGGTGT +
Preference number: 4 (lower is better)
Translates to: SWPHWGNGTQSCLPCPSHGKMSP*AIRKRC
Trigger: ACACCGTTTCCTGATTGCTCAGGGACTCATCTTTCC...GTGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCCCCCAGTGCGGCCAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR GCA 90 bp TGGGGGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCACTCTCTCACTGCGCATTTGTGGTACAGCTaGCGGTGGTACTGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: WGNGTQSCLPCPSHSLTAHLWYS*RWYWKG
Trigger: CCCCTTCCAGTACCACCGGCAGCTGTACCACAAATG...CGCAGTGAGAGAGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR GCA 90 bp GGGGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCACTCTCTCACTGCGGACAGCCACTCTCTCACTaGGGAATCACCAAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: GEWDTILPSMPQPLSHCGQPLSH*GITKEG
Trigger: TCCCTCCTTGGTGATTCCGCAGTGAGAGAGTGGCTG...TCCGCAGTGAGAGAGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CCA 90 bp GCTGGCCGCACTGGGGGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCACTTGTACTTATGCTCCTTaGGGGCTTCCCAAGGTGGAA +
Preference number: 4 (lower is better)
Translates to: AGRTGGMGHNLAFHAPATCTYAP*GLPKVE
Trigger: TTCCACCTTGGGAAGCCCCCAAGGAGCATAAGTACA...AGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCCCCCAGTGCGGCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CCA 90 bp GGGACACAATCTTGCCTTCCATGCCCCAGCCACTCTCTCACTGCGGAATCACCACAGGTCCCTCCTTTCTaGCAGGGGCTGTGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: GTQSCLPCPSHSLTAESPQVPPF*QGLCLL
Trigger: CAGCAAACACAGCCCCTGCCAGAAAGGAGGGACCTG...TGGTGATTCCGCAGTGAGAGAGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CCA 90 bp GCATTTTCAAAGCACTTTATTGAGTTCCTGCGCCATCCTGGCGCGGAGCTGGCCCCTCCTGCAGGAAGCTaGCATATTCCTCCGCCCCCT +
Preference number: 4 (lower is better)
Translates to: AFSKHFIEFLRHPGAELAPPAGS*HIPPPP
Trigger: AGGGGGCGGAGGAATATGCCAGCTTCCTGCAGGAGG...GGCCAGCTCCGCGCCAGGATGGCGCAGGAACTCAATAAAGTGCTTTGAAAATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR TCA 90 bp TTTTCAAAGCACTTTATTGAGTTCCTGCGCCATCCTGGCGCGGAGCTGGCCGCACCCCATCGCTGGTCCTaGTCAAAGTTGGGGGTGGTA +
Preference number: 4 (lower is better)
Translates to: FSKHFIEFLRHPGAELAAPHRWS*SKLGVV
Trigger: TACCACCCCCAACTTTGATCAGGACCAGCGATGGGG...TGCGGCCAGCTCCGCGCCAGGATGGCGCAGGAACTCAATAAAGTGCTTTGAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR TCA 90 bp GGCCGCACTGGGGGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCACTCTCAAAAACCGGAGAAGCTaGGGCTCAAAGCACTTCTCT +
Preference number: 4 (lower is better)
Translates to: GRTGGMGHNLAFHAPATLKNRRS*GSKHFS
Trigger: AGAGAAGTGCTTTGAGCCTCAGCTTCTCCGGTTTTT...GAGAGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCCCCCAGTGCGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR GCA 90 bp GCTGGCCGCACTGGGGGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCACTTCAGCTTTGTACTTATaGTCCTTGGGGGCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: AGRTGGMGHNLAFHAPATSALYL*SLGASQ
Trigger: TTGGGAAGCCCCCAAGGAGCATAAGTACAAAGCTGA...AGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCCCCCAGTGCGGCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR GCA 90 bp CTGGGGGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCACTCTCTCACTGCGGCAGGGGCTGTGTTTaGTGCAGTGGTCTTTCACTT +
Preference number: 4 (lower is better)
Translates to: LGEWDTILPSMPQPLSHCGRGCV*CSGLSL
Trigger: AAGTGAAAGACCACTGCAGCAAACACAGCCCCTGCC...GCAGTGAGAGAGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCCCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CCA 90 bp TTTTCAAAGCACTTTATTGAGTTCCTGCGCCATCCTGGCGCGGAGCTGGCCGCATGTGGACAGAGACAGTaGGGGCCGCTTGGCATGTTC +
Preference number: 4 (lower is better)
Translates to: FSKHFIEFLRHPGAELAACGQRQ*GPLGMF
Trigger: GAACATGCCAAGCGGCCCCCACTGTCTCTGTCCACA...TGCGGCCAGCTCCGCGCCAGGATGGCGCAGGAACTCAATAAAGTGCTTTGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR TCA 90 bp GCATTTTCAAAGCACTTTATTGAGTTCCTGCGCCATCCTGGCGCGGAGCTGGCCGGCAGTGGTTTCCAGTaGGGTGTTGTGGACAGAGAC +
Preference number: 4 (lower is better)
Translates to: AFSKHFIEFLRHPGAELAGSGFQ*GVVDRD
Trigger: GTCTCTGTCCACAACACCTCACTGGAAACCACTGCC...GGCCAGCTCCGCGCCAGGATGGCGCAGGAACTCAATAAAGTGCTTTGAAAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR TCA 90 bp CACTGGGGGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCACTCTCTCACTCCAAGGAGGGAAAGATaGGTCCCTGAGCAATCAGGA +
Preference number: 4 (lower is better)
Translates to: HWGNGTQSCLPCPSHSLTPRRER*VPEQSG
Trigger: TCCTGATTGCTCAGGGACTCATCTTTCCCTCCTTGG...AGTGAGAGAGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCCCCCAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR GCA 90 bp GCACTGGGGGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCACTCTCTCACGCATCTGGCCACAGCTaGTTGCTCAGTTCTATACCA +
Preference number: 4 (lower is better)
Translates to: ALGEWDTILPSMPQPLSHASGHS*LLSSIP
Trigger: TGGTATAGAACTGAGCAAGCAGCTGTGGCCAGATGC...GTGAGAGAGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCCCCCAGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR GCA 90 bp GGGGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCACTCTCTCACTGCGGAAGGGGCTGTGTTTGCTaGAGTGGTCTTTCACTTTCT +
Preference number: 4 (lower is better)
Translates to: GEWDTILPSMPQPLSHCGRGCVC*SGLSLS
Trigger: AGAAAGTGAAAGACCACTGCAGCAAACACAGCCCCT...TCCGCAGTGAGAGAGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CCA 90 bp GCACTGGGGGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCACTCTCTCACCTGTGTTTGCTGCAGTaGTCTTTCACTTTCTTGGGC +
Preference number: 4 (lower is better)
Translates to: ALGEWDTILPSMPQPLSHLCLLQ*SFTFLG
Trigger: GCCCAAGAAAGTGAAAGACCACTGCAGCAAACACAG...GTGAGAGAGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCCCCCAGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR TCA 90 bp TTTTCAAAGCACTTTATTGAGTTCCTGCGCCATCCTGGCGCGGAGCTGGCCGCATGGAATCGAAAGTGTTaGCTCCAAGCTCACCAGCAG +
Preference number: 4 (lower is better)
Translates to: FSKHFIEFLRHPGAELAAWNRKC*LQAHQQ
Trigger: CTGCTGGTGAGCTTGGAGTCAACACTTTCGATTCCA...TGCGGCCAGCTCCGCGCCAGGATGGCGCAGGAACTCAATAAAGTGCTTTGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR GCA 90 bp GGGACACAATCTTGCCTTCCATGCCCCAGCCACTCTCTCACTGCGGAATCACCACTGGCCACAGCTGCTTaGTCAGTTCTATACCATATC +
Preference number: 4 (lower is better)
Translates to: GTQSCLPCPSHSLTAESPLATAA*SVLYHI
Trigger: GATATGGTATAGAACTGAGCAAGCAGCTGTGGCCAG...TGGTGATTCCGCAGTGAGAGAGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR TCA 90 bp GGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCACTCTCTCACTGCGGAATTTCAAAGCACTTTATTaGGTTCCTGCGCCATCCTGG +
Preference number: 4 (lower is better)
Translates to: GMGHNLAFHAPATLSLRNFKALY*VPAPSW
Trigger: CCAGGATGGCGCAGGAACTCAATAAAGTGCTTTGAA...ATTCCGCAGTGAGAGAGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CCA 90 bp GCATTTTCAAAGCACTTTATTGAGTTCCTGCGCCATCCTGGCGCGGAGCTGGCCGGTCTTTCACTTTCTTaGGCTCCAAACAGTATCCCC +
Preference number: 4 (lower is better)
Translates to: AFSKHFIEFLRHPGAELAGLSLS*APNSIP
Trigger: GGGGATACTGTTTGGAGCCCAAGAAAGTGAAAGACC...GGCCAGCTCCGCGCCAGGATGGCGCAGGAACTCAATAAAGTGCTTTGAAAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CCA 90 bp TTTTCAAAGCACTTTATTGAGTTCCTGCGCCATCCTGGCGCGGAGCTGGCCGCAAAGCACTTCTCTTTCTaGCAGTGGTTTCCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: FSKHFIEFLRHPGAELAAKHFSF*QWFPVR
Trigger: CCTCACTGGAAACCACTGCCAGAAAGAGAAGTGCTT...TGCGGCCAGCTCCGCGCCAGGATGGCGCAGGAACTCAATAAAGTGCTTTGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CCA 90 bp GGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCACTCTCTCACTGCGGAATTTCTCTTTCTGGCAGTaGTTTCCAGTGAGGTGTTGT +
Preference number: 4 (lower is better)
Translates to: GMGHNLAFHAPATLSLRNFSFWQ*FPVRCC
Trigger: ACAACACCTCACTGGAAACCACTGCCAGAAAGAGAA...ATTCCGCAGTGAGAGAGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS CCA 90 bp CCGCCCCCTCGAACTGGTGGCCCCAGCCGGCCACCTGGCAGAGCGTaGTCTCGGAGGGTCGCGCGGCGCCGCTTGGCAGGCACACCGGCT +
Preference number: 5 (lower is better)
Translates to: PPPRTGGPSRPPGRA*SRRVARRRLAGTPA
Trigger: AGCCGGTGTGCCTGCCAAGCGGCGCCGCGCGACCCTCCGAGACCACGCTCTGCCAGGTGGCCGGCTGGGGCCACCAGTTCGAGGGGGCGG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253496.4
ENST00000502854.5
ENST00000504406.5
ENST00000510358.5
CDS CCA 90 bp AAGCTGCGCTGGGAGACGGAGGAGCCGCGGCCCCTGGGGCGGCTCTaGGCGGGCGGGTACTCGCCGGTCCTGCAGGCAGTGAGCGGCCGT +
Preference number: 5 (lower is better)
Translates to: KLRWETEEPRPLGRL*AGGYSPVLQAVSGR
Trigger: ACGGCCGCTCACTGCCTGCAGGACCGGCGAGTACCCGCCCGCCCAGAGCCGCCCCAGGGGCCGCGGCTCCTCCGTCTCCCAGCGCAGCTT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502854.5
ENST00000510358.5
CDS CCA 90 bp CAGTGGCACAGGCGGTGGCCCTCCACCTCTAGGCAGCGACCCCCATaGAGGCACGGGTTGGTGCGGCAGGCCTGGCTGGCCAGCCGCTGG +
Preference number: 5 (lower is better)
Translates to: QWHRRWPSTSRQRPP*RHGLVRQAWLASRW
Trigger: CCAGCGGCTGGCCAGCCAGGCCTGCCGCACCAACCCGTGCCTCCATGGGGGTCGCTGCCTAGAGGTGGAGGGCCACCGCCTGTGCCACTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS CCA 90 bp GGTCGTGGGCTGAGGCTTCGGCGGTGCCGGCTGCGCGGGCATGAGTaGGACATGAAGCCTAGGGGACACCGGGGTCGGAGGCGCCGCCTG +
Preference number: 5 (lower is better)
Translates to: GRGLRLRRCRLRGHE*DMKPRGHRGRRRRL
Trigger: CAGGCGGCGCCTCCGACCCCGGTGTCCCCTAGGCTTCATGTCCCACTCATGCCCGCGCAGCCGGCACCGCCGAAGCCTCAGCCCACGACC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253496.4
ENST00000502854.5
ENST00000503736.1
ENST00000510358.5
CDS CCA 90 bp GCATATTCCTCCGCCCCCTCGAACTGGTGGCCCCAGCCGGCCACCTaGCAGAGCGTGGTCTCGGAGGGTCGCGCGGCGCCGCTTGGCAGG +
Preference number: 5 (lower is better)
Translates to: AYSSAPSNWWPQPAT*QSVVSEGRAAPLGR
Trigger: CCTGCCAAGCGGCGCCGCGCGACCCTCCGAGACCACGCTCTGCCAGGTGGCCGGCTGGGGCCACCAGTTCGAGGGGGCGGAGGAATATGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253496.4
ENST00000502854.5
ENST00000504406.5
ENST00000510358.5
CDS CCA 90 bp GGCCACCTGGCAGAGCGTGGTCTCGGAGGGTCGCGCGGCGCCGCTTaGCAGGCACACCGGCTGAACGTAAGGCGACAGGAGCGCGCAGCT +
Preference number: 5 (lower is better)
Translates to: GHLAERGLGGSRGAA*QAHRLNVRRQERAA
Trigger: AGCTGCGCGCTCCTGTCGCCTTACGTTCAGCCGGTGTGCCTGCCAAGCGGCGCCGCGCGACCCTCCGAGACCACGCTCTGCCAGGTGGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253496.4
ENST00000502854.5
ENST00000504406.5
ENST00000510358.5
ENST00000514943.1
CDS GCA 90 bp CTGGGACTGAGGCGGGGTCCGGGTCGTGGGCTGAGGCTTCGGCGGTaGCGGCTGCGCGGGCATGAGTGGGACATGAAGCCTAGGGGACAC +
Preference number: 5 (lower is better)
Translates to: LGLRRGPGRGLRLRR*RLRGHEWDMKPRGH
Trigger: GTGTCCCCTAGGCTTCATGTCCCACTCATGCCCGCGCAGCCGGCACCGCCGAAGCCTCAGCCCACGACCCGGACCCCGCCTCAGTCCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253496.4
ENST00000502854.5
ENST00000503736.1
ENST00000510358.5
CDS CCA 90 bp CCAGTCCCCAGTTCCGCGCTTGCTCGGCAGTCACGTTCCGGTAGGTaGCCTCCGAGGCCCACGGCTGACAGGGCGCACCCGAGAGCGTGG +
Preference number: 5 (lower is better)
Translates to: PVPSSALARQSRSGR*PPRPTADRAHPRAW
Trigger: CCACGCTCTCGGGTGCGCCCTGTCAGCCGTGGGCCTCGGAGGCCACCTACCGGAACGTGACTGCCGAGCAAGCGCGGAACTGGGGACTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS CCA 90 bp ACAGACTCTTGCGGAGCCGCTGCCCGCAGCTCAGTGGGCCGTTCCTaGTCAGGGAAGGCGGCTGCTCCCGCTTCGCCGGCAAGGCTCCCG +
Preference number: 5 (lower is better)
Translates to: TDSCGAAARSSVGRS*SGKAAAPASPARLP
Trigger: CGGGAGCCTTGCCGGCGAAGCGGGAGCAGCCGCCTTCCCTGACCAGGAACGGCCCACTGAGCTGCGGGCAGCGGCTCCGCAAGAGTCTGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253496.4
ENST00000502854.5
ENST00000503736.1
CDS CCA 90 bp CGGTGCCGCCCTCGAGGAACCCTGCGCAGAGCATGCCGGGGAGGATaGAGGATCCGTGCACGTCCGGGGCTGAGCAGCGCTCCAGGGAGA +
Preference number: 5 (lower is better)
Translates to: RCRPRGTLRRACRGG*RIRARPGLSSAPGR
Trigger: TCTCCCTGGAGCGCTGCTCAGCCCCGGACGTGCACGGATCCTCCATCCTCCCCGGCATGCTCTGCGCAGGGTTCCTCGAGGGCGGCACCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253496.4
ENST00000502854.5
ENST00000504406.5
ENST00000510358.5
CDS CCA 90 bp TTCATAGGCAAGGAGGCCTCGAACTGGTGGCCCCAGCCGGCCACCTaGCAGAGCGTGGTCTCGGAGGGTCGCGCGGCGCCGCTTGGCAGG +
Preference number: 5 (lower is better)
Translates to: FIGKEASNWWPQPAT*QSVVSEGRAAPLGR
Trigger: CCTGCCAAGCGGCGCCGCGCGACCCTCCGAGACCACGCTCTGCCAGGTGGCCGGCTGGGGCCACCAGTTCGAGGCCTCCTTGCCTATGAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514943.1
CDS TCA 90 bp GACAGGGCGCACCCGAGAGCGTGGTCCTGGCCAGGCCGCGGTAGCTaGGCCCGCGGCCATCATAGCAGCTTGCCTTGGTGTCCACGTCGC +
Preference number: 5 (lower is better)
Translates to: DRAHPRAWSWPGRGS*ARGHHSSLPWCPRR
Trigger: GCGACGTGGACACCAAGGCAAGCTGCTATGATGGCCGCGGGCTCAGCTACCGCGGCCTGGCCAGGACCACGCTCTCGGGTGCGCCCTGTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS GCA 90 bp GCGCCACCAGCCCGCCAACGACGCGGGTCATCGAAGACAGACTCTTaGGGAGCCGCTGCCCGCAGCTCAGTGGGCCGTTCCTGGTCAGGG +
Preference number: 5 (lower is better)
Translates to: APPARQRRGSSKTDS*GAAARSSVGRSWSG
Trigger: CCCTGACCAGGAACGGCCCACTGAGCTGCGGGCAGCGGCTCCGCAAGAGTCTGTCTTCGATGACCCGCGTCGTTGGCGGGCTGGTGGCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253496.4
ENST00000502854.5
ENST00000503736.1
ENST00000510358.5
CDS CCA 90 bp ACGGCCAACGTCTGGCACGGCTCACAGCTGTGGTTACGGCGTTCCTaGCCGAGCACCACCGTCAGATCCTCGGGTGCGGGCCTGCGGGGG +
Preference number: 5 (lower is better)
Translates to: TANVWHGSQLWLRRS*PSTTVRSSGAGLRG
Trigger: CCCCCGCAGGCCCGCACCCGAGGATCTGACGGTGGTGCTCGGCCAGGAACGCCGTAACCACAGCTGTGAGCCGTGCCAGACGTTGGCCGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502854.5
ENST00000504406.5
ENST00000510358.5
CDS CCA 90 bp CAGTGGCACAGGCGGTGGCCCTCCACCTCTAGGCAGCGACCCCCATaGAGGCACGGGTTGGTGCGGCAGGCTTGGGGAGGGAACGCAGTG +
Preference number: 5 (lower is better)
Translates to: QWHRRWPSTSRQRPP*RHGLVRQAWGGNAV
Trigger: CACTGCGTTCCCTCCCCAAGCCTGCCGCACCAACCCGTGCCTCCATGGGGGTCGCTGCCTAGAGGTGGAGGGCCACCGCCTGTGCCACTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503736.1
CDS CCA 90 bp ACAGACTCTTGCGGAGCCGCTGCCCGCAGCTCAGTGGGCCGTTCCTaGTCAGGGAAGGCGGCTGCTCCCGCTTCGCCGGCAAGGCTGTGG +
Preference number: 5 (lower is better)
Translates to: TDSCGAAARSSVGRS*SGKAAAPASPARLW
Trigger: CCACAGCCTTGCCGGCGAAGCGGGAGCAGCCGCCTTCCCTGACCAGGAACGGCCCACTGAGCTGCGGGCAGCGGCTCCGCAAGAGTCTGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510358.5
CDS GCA 90 bp CCGCCAACGACGCGGGTCATCGAAGACAGACTCTTGCGGAGCCGCTaGCCGCAGCTCAGTGGGCCGTTCCTGGTCAGGGAAGGCGGCTGC +
Preference number: 5 (lower is better)
Translates to: PPTTRVIEDRLLRSR*PQLSGPFLVREGGC
Trigger: GCAGCCGCCTTCCCTGACCAGGAACGGCCCACTGAGCTGCGGGCAGCGGCTCCGCAAGAGTCTGTCTTCGATGACCCGCGTCGTTGGCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253496.4
ENST00000502854.5
ENST00000503736.1
ENST00000510358.5
CDS CCA 90 bp GGTCATCGAAGACAGACTCTTGCGGAGCCGCTGCCCGCAGCTCAGTaGGCCGTTCCTGGTCAGGGAAGGCGGCTGCTCCCGCTTCGCCGG +
Preference number: 5 (lower is better)
Translates to: GHRRQTLAEPLPAAQ*AVPGQGRRLLPLRR
Trigger: CCGGCGAAGCGGGAGCAGCCGCCTTCCCTGACCAGGAACGGCCCACTGAGCTGCGGGCAGCGGCTCCGCAAGAGTCTGTCTTCGATGACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253496.4
ENST00000502854.5
ENST00000503736.1
ENST00000510358.5
CDS CCA 90 bp ACGGCCAACGTCTGGCACGGCTCACAGCTGTGGTTACGGCGTTCCTaGCCGAGCACCACCGTCAGATCCTCGGGTGCGGGCCGGTCCTGC +
Preference number: 5 (lower is better)
Translates to: TANVWHGSQLWLRRS*PSTTVRSSGAGRSC
Trigger: GCAGGACCGGCCCGCACCCGAGGATCTGACGGTGGTGCTCGGCCAGGAACGCCGTAACCACAGCTGTGAGCCGTGCCAGACGTTGGCCGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253496.4
ENST00000503736.1
CDS GCA 90 bp GGGGCTGAGCAGCGCTCCAGGGAGAGGAACGGTACCTGCGCCTCCTaGAGGAAGCTGGCATATTCCTCCGCCCCCTCGAACTGGTGGCCC +
Preference number: 5 (lower is better)
Translates to: GAEQRSRERNGTCAS*RKLAYSSAPSNWWP
Trigger: GGGCCACCAGTTCGAGGGGGCGGAGGAATATGCCAGCTTCCTGCAGGAGGCGCAGGTACCGTTCCTCTCCCTGGAGCGCTGCTCAGCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253496.4
ENST00000502854.5
ENST00000504406.5
ENST00000510358.5
CDS GCA 90 bp TCGAGGAACCCTGCGCAGAGCATGCCGGGGAGGATGGAGGATCCGTaGACGTCCGGGGCTGAGCAGCGCTCCAGGGAGAGGAACGGTACC +
Preference number: 5 (lower is better)
Translates to: SRNPAQSMPGRMEDP*TSGAEQRSRERNGT
Trigger: GGTACCGTTCCTCTCCCTGGAGCGCTGCTCAGCCCCGGACGTGCACGGATCCTCCATCCTCCCCGGCATGCTCTGCGCAGGGTTCCTCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253496.4
ENST00000502854.5
ENST00000504406.5
ENST00000510358.5
CDS GCA 90 bp TGCACGTCCGGGGCTGAGCAGCGCTCCAGGGAGAGGAACGGTACCTaGGCCTCCTGCAGGAAGCTGGCATATTCCTCCGCCCCCTCGAAC +
Preference number: 5 (lower is better)
Translates to: CTSGAEQRSRERNGT*ASCRKLAYSSAPSN
Trigger: GTTCGAGGGGGCGGAGGAATATGCCAGCTTCCTGCAGGAGGCGCAGGTACCGTTCCTCTCCCTGGAGCGCTGCTCAGCCCCGGACGTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253496.4
ENST00000502854.5
ENST00000504406.5
ENST00000510358.5
CDS GCA 90 bp TTGGCAGGCACACCGGCTGAACGTAAGGCGACAGGAGCGCGCAGCTaGCGTCCGCATCCTCCTGAAGGCGCAACAGAGCTAACCCGGGCG +
Preference number: 5 (lower is better)
Translates to: LAGTPAERKATGARS*RPHPPEGATELTRA
Trigger: CGCCCGGGTTAGCTCTGTTGCGCCTTCAGGAGGATGCGGACGGCAGCTGCGCGCTCCTGTCGCCTTACGTTCAGCCGGTGTGCCTGCCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504406.5
CDS GCA 90 bp GGGGCTGAGCAGCGCTCCAGGGAGAGGAACGGTACCTGCGCCTCCTaGAGGAAGCTGGCATATTCCTCCGCCCCTGCGAACACAGAGCGC +
Preference number: 5 (lower is better)
Translates to: GAEQRSRERNGTCAS*RKLAYSSAPANTER
Trigger: GCGCTCTGTGTTCGCAGGGGCGGAGGAATATGCCAGCTTCCTGCAGGAGGCGCAGGTACCGTTCCTCTCCCTGGAGCGCTGCTCAGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514943.1
CDS GCA 90 bp TTGGCAGGCACACCGGCTGAACGTAAGGCGACAGGAGCGCGCAGCTaGCGTCCGCATCCTCCTGAAGGCGCAACAGAGCCAGGTCGTGCT +
Preference number: 5 (lower is better)
Translates to: LAGTPAERKATGARS*RPHPPEGATEPGRA
Trigger: AGCACGACCTGGCTCTGTTGCGCCTTCAGGAGGATGCGGACGGCAGCTGCGCGCTCCTGTCGCCTTACGTTCAGCCGGTGTGCCTGCCAA
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253496.4
ENST00000502854.5
ENST00000510358.5
ENST00000514943.1
CDS-3UTR CAA 90 bp CAAAGCACTTTATTGAGTTCCTGCGCCATCCTGGCGCGGAGCTGGCCGCACTGGCCATGGAGGCACGGGTaGGTGCGGCAGGCCTGGCTG +
Preference number: 5 (lower is better)
Translates to: QSTLLSSCAILARSWPHWPWRHG*VRQAWL
Trigger: CAGCCAGGCCTGCCGCACCAACCCGTGCCTCCATGG...CCAGTGCGGCCAGCTCCGCGCCAGGATGGCGCAGGAACTCAATAAAGTGCTTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CAA 90 bp GGGGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCACTCTCTCACTGCGGAGTCGCGCGGCGCCGCTaGGCAGGCACACCGGCTGAA +
Preference number: 5 (lower is better)
Translates to: GEWDTILPSMPQPLSHCGVARRR*AGTPAE
Trigger: TTCAGCCGGTGTGCCTGCCAAGCGGCGCCGCGCGAC...TCCGCAGTGAGAGAGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS TCA 90 bp TTCCTCCGCCCCTGCGAACACAGAGCGCCTTCTTCACACCCCATCTaGCAACGCTTGCCGCCCGGACGATGGACAAAGCTGCTCCAGGCG +
Preference number: 5 (lower is better)
Translates to: FLRPCEHRAPSSHPI*QRLPPGRWTKLLQA
Trigger: CGCCTGGAGCAGCTTTGTCCATCGTCCGGGCGGCAAGCGTTGTCAGATGGGGTGTGAAGAAGGCGCTCTGTGTTCGCAGGGGCGGAGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514943.1
CDS-3UTR CAA 90 bp GCTGGCCGCACTGGGGGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCACTGACAGTGGGGGCCGCTaGGCATGTTCACACAGGTCC +
Preference number: 5 (lower is better)
Translates to: AGRTGGMGHNLAFHAPATDSGGR*ACSHRS
Trigger: GGACCTGTGTGAACATGCCAAGCGGCCCCCACTGTC...AGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCCCCCAGTGCGGCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS GCA 90 bp GGCAGGCCTGGCTGGCCAGCCGCTGGCAGTGGGCATCAGGACCCTTaGACTGGCATCTGGCCACAGCTGCTTGCTCAGTTCTATACCATA +
Preference number: 5 (lower is better)
Translates to: GRPGWPAAGSGHQDP*TGIWPQLLAQFYTI
Trigger: TATGGTATAGAACTGAGCAAGCAGCTGTGGCCAGATGCCAGTGCAAGGGTCCTGATGCCCACTGCCAGCGGCTGGCCAGCCAGGCCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CAA 90 bp TGGGGGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCACTCTCTCACTGCGCACGGGCGGATGTCGTaGTCCGGGTTCCGGCAGAAG +
Preference number: 5 (lower is better)
Translates to: WGNGTQSCLPCPSHSLTAHGRMS*SGFRQK
Trigger: CTTCTGCCGGAACCCGGACAACGACATCCGCCCGTG...CGCAGTGAGAGAGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CAA 90 bp CAAAGCACTTTATTGAGTTCCTGCGCCATCCTGGCGCGGAGCTGGCCGCACTGGCATGGCATCCGTCCGTaGGTCCAGCTGCCTATCCAG +
Preference number: 5 (lower is better)
Translates to: QSTLLSSCAILARSWPHWHGIRP*VQLPIQ
Trigger: CTGGATAGGCAGCTGGACCAACGGACGGATGCCATG...CCAGTGCGGCCAGCTCCGCGCCAGGATGGCGCAGGAACTCAATAAAGTGCTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CAA 90 bp TGGGGGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCACTCTCTCACTGCGATCGAAGACAGACTCTaGCGGAGCCGCTGCCCGCAG +
Preference number: 5 (lower is better)
Translates to: WGNGTQSCLPCPSHSLTAIEDRL*RSRCPQ
Trigger: CTGCGGGCAGCGGCTCCGCAAGAGTCTGTCTTCGAT...CGCAGTGAGAGAGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CAA 90 bp GCATTTTCAAAGCACTTTATTGAGTTCCTGCGCCATCCTGGCGCGGAGCTGGCCCCGGCGCTCTGCAGCTaGGTCCTCACACACCAGCGG +
Preference number: 5 (lower is better)
Translates to: AFSKHFIEFLRHPGAELAPALCS*VLTHQR
Trigger: CCGCTGGTGTGTGAGGACCAAGCTGCAGAGCGCCGG...GGCCAGCTCCGCGCCAGGATGGCGCAGGAACTCAATAAAGTGCTTTGAAAATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS CCA 90 bp GCCTGGCTGGCCAGCCGCTGGCAGTGGGCATCAGGACCCTTGCACTaGCATCTGGCCACAGCTGCTTGCTCAGTTCTATACCATATCTCA +
Preference number: 5 (lower is better)
Translates to: AWLASRWQWASGPLH*HLATAACSVLYHIS
Trigger: TGAGATATGGTATAGAACTGAGCAAGCAGCTGTGGCCAGATGCCAGTGCAAGGGTCCTGATGCCCACTGCCAGCGGCTGGCCAGCCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CAA 90 bp CTGGGGGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCACTCTCTCACTGCTGGGCATCAGGACCCTaGCACTGGCATCTGGCCACA +
Preference number: 5 (lower is better)
Translates to: LGEWDTILPSMPQPLSHCWASGP*HWHLAT
Trigger: TGTGGCCAGATGCCAGTGCAAGGGTCCTGATGCCCA...GCAGTGAGAGAGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCCCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CAA 90 bp GCACTGGGGGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCACTCTCTCACGGCCATCATAGCAGCTaGCCTTGGTGTCCACGTCGC +
Preference number: 5 (lower is better)
Translates to: ALGEWDTILPSMPQPLSHGHHSS*PWCPRR
Trigger: GCGACGTGGACACCAAGGCAAGCTGCTATGATGGCC...GTGAGAGAGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCCCCCAGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CAA 90 bp GCATTTTCAAAGCACTTTATTGAGTTCCTGCGCCATCCTGGCGCGGAGCTGGCCTCCCCAGTTCCGCGCTaGCTCGGCAGTCACGTTCCG +
Preference number: 5 (lower is better)
Translates to: AFSKHFIEFLRHPGAELASPVPR*LGSHVP
Trigger: CGGAACGTGACTGCCGAGCAAGCGCGGAACTGGGGA...GGCCAGCTCCGCGCCAGGATGGCGCAGGAACTCAATAAAGTGCTTTGAAAATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CAA 90 bp GGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCACTCTCTCACTGCGGAATCCAGCTGATGATGCCTaGCAGGGTGAGCCGGCGCTC +
Preference number: 5 (lower is better)
Translates to: GMGHNLAFHAPATLSLRNPADDA*QGEPAL
Trigger: GAGCGCCGGCTCACCCTGCAAGGCATCATCAGCTGG...ATTCCGCAGTGAGAGAGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CAA 90 bp GGCCGCACTGGGGGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCACTCTCGAATGGGACACAATCTaGCCTTCCATGCCCCAGCCA +
Preference number: 5 (lower is better)
Translates to: GRTGGMGHNLAFHAPATLEWDTI*PSMPQP
Trigger: TGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTC...GAGAGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCCCCCAGTGCGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CAA 90 bp GCATTTTCAAAGCACTTTATTGAGTTCCTGCGCCATCCTGGCGCGGAGCTGGCCGGGCCTGGCCGGCCCTaGTGGGTACATTTGTGGTAC +
Preference number: 5 (lower is better)
Translates to: AFSKHFIEFLRHPGAELAGPGRP*WVHLWY
Trigger: GTACCACAAATGTACCCACAAGGGCCGGCCAGGCCC...GGCCAGCTCCGCGCCAGGATGGCGCAGGAACTCAATAAAGTGCTTTGAAAATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CAA 90 bp TGGGGGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCACTCTCTCACTGCGGTTTCCAGTGAGGTGTaGTGGACAGAGACAGTGGGG +
Preference number: 5 (lower is better)
Translates to: WGNGTQSCLPCPSHSLTAVSSEV*WTETVG
Trigger: CCCCACTGTCTCTGTCCACAACACCTCACTGGAAAC...CGCAGTGAGAGAGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS TCA 90 bp CCACTCTCTCACTGCGGAATCACCAAGGAGGGAAAGATGAGTCCCTaGGCAATCAGGAAACGGTGTGCTCCCGGATCCAGGCCAGGTAGT +
Preference number: 5 (lower is better)
Translates to: PLSHCGITKEGKMSP*AIRKRCAPGSRPGS
Trigger: ACTACCTGGCCTGGATCCGGGAGCACACCGTTTCCTGATTGCTCAGGGACTCATCTTTCCCTCCTTGGTGATTCCGCAGTGAGAGAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253496.4
ENST00000502854.5
ENST00000504406.5
ENST00000510358.5
CDS-3UTR CAA 90 bp GCACTGGGGGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCACTCTCTCACTTGTACTTATGCTCCTaGGGGGCTTCCCAAGGTGGA +
Preference number: 5 (lower is better)
Translates to: ALGEWDTILPSMPQPLSHLYLCS*GASQGG
Trigger: TCCACCTTGGGAAGCCCCCAAGGAGCATAAGTACAA...GTGAGAGAGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCCCCCAGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CAA 90 bp TTTTCAAAGCACTTTATTGAGTTCCTGCGCCATCCTGGCGCGGAGCTGGCCGCACCCTTGTGGGTACATTaGTGGTACAGCTGCCGGTGG +
Preference number: 5 (lower is better)
Translates to: FSKHFIEFLRHPGAELAAPLWVH*WYSCRW
Trigger: CCACCGGCAGCTGTACCACAAATGTACCCACAAGGG...TGCGGCCAGCTCCGCGCCAGGATGGCGCAGGAACTCAATAAAGTGCTTTGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CAA 90 bp AGCTGGCCGCACTGGGGGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCACTGGTCTTTCACTTTCTaGGGCTCCAAACAGTATCCC +
Preference number: 5 (lower is better)
Translates to: SWPHWGNGTQSCLPCPSHWSFTF*GSKQYP
Trigger: GGGATACTGTTTGGAGCCCAAGAAAGTGAAAGACCA...GTGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCCCCCAGTGCGGCCAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CAA 90 bp GGGACACAATCTTGCCTTCCATGCCCCAGCCACTCTCTCACTGCGGAATCACCATGGCAGGGGCTGTGTTaGCTGCAGTGGTCTTTCACT +
Preference number: 5 (lower is better)
Translates to: GTQSCLPCPSHSLTAESPWQGLC*LQWSFT
Trigger: AGTGAAAGACCACTGCAGCAAACACAGCCCCTGCCA...TGGTGATTCCGCAGTGAGAGAGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS CCA 90 bp CTCAAAGCACTTCTCTTTCTGGCAGTGGTTTCCAGTGAGGTGTTGTaGACAGAGACAGTGGGGGCCGCTTGGCATGTTCACACAGGTCCC +
Preference number: 5 (lower is better)
Translates to: LKALLFLAVVSSEVL*TETVGAAWHVHTGP
Trigger: GGGACCTGTGTGAACATGCCAAGCGGCCCCCACTGTCTCTGTCCACAACACCTCACTGGAAACCACTGCCAGAAAGAGAAGTGCTTTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS CCA 90 bp TGGCCAGCCGCTGGCAGTGGGCATCAGGACCCTTGCACTGGCATCTaGCCACAGCTGCTTGCTCAGTTCTATACCATATCTCATTCTTGT +
Preference number: 5 (lower is better)
Translates to: WPAAGSGHQDPCTGI*PQLLAQFYTISHSC
Trigger: ACAAGAATGAGATATGGTATAGAACTGAGCAAGCAGCTGTGGCCAGATGCCAGTGCAAGGGTCCTGATGCCCACTGCCAGCGGCTGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CAA 90 bp CTGGGGGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCACTCTCTCACTGCGTGGAATCGAAAGTGTaGACTCCAAGCTCACCAGCA +
Preference number: 5 (lower is better)
Translates to: LGEWDTILPSMPQPLSHCVESKV*TPSSPA
Trigger: TGCTGGTGAGCTTGGAGTCAACACTTTCGATTCCAC...GCAGTGAGAGAGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCCCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CAA 90 bp CAAAGCACTTTATTGAGTTCCTGCGCCATCCTGGCGCGGAGCTGGCCGCACTGGTTTCAAAGCACTTTATaGAGTTCCTGCGCCATCCTG +
Preference number: 5 (lower is better)
Translates to: QSTLLSSCAILARSWPHWFQSTL*SSCAIL
Trigger: CAGGATGGCGCAGGAACTCAATAAAGTGCTTTGAAA...CCAGTGCGGCCAGCTCCGCGCCAGGATGGCGCAGGAACTCAATAAAGTGCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CAA 90 bp TTTTCAAAGCACTTTATTGAGTTCCTGCGCCATCCTGGCGCGGAGCTGGCCGCAGTGTGCTCTTCAGCTTaGTACTTATGCTCCTTGGGG +
Preference number: 5 (lower is better)
Translates to: FSKHFIEFLRHPGAELAAVCSSA*YLCSLG
Trigger: CCCCAAGGAGCATAAGTACAAAGCTGAAGAGCACAC...TGCGGCCAGCTCCGCGCCAGGATGGCGCAGGAACTCAATAAAGTGCTTTGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS GCA 90 bp CTGGCAGTGGGCATCAGGACCCTTGCACTGGCATCTGGCCACAGCTaGTTGCTCAGTTCTATACCATATCTCATTCTTGTGGAAAAACCG +
Preference number: 5 (lower is better)
Translates to: LAVGIRTLALASGHS*LLSSIPYLILVEKP
Trigger: CGGTTTTTCCACAAGAATGAGATATGGTATAGAACTGAGCAAGCAGCTGTGGCCAGATGCCAGTGCAAGGGTCCTGATGCCCACTGCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS-3UTR CAA 90 bp GCACTGGGGGAATGGGACACAATCTTGCCTTCCATGCCCCAGCCACTCTCTCACTACCATATCTCATTCTaGTGGAAAAACCGGAGAAGC +
Preference number: 5 (lower is better)
Translates to: ALGEWDTILPSMPQPLSHYHISF*WKNRRS
Trigger: GCTTCTCCGGTTTTTCCACAAGAATGAGATATGGTA...GTGAGAGAGTGGCTGGGGCATGGAAGGCAAGATTGTGTCCCATTCCCCCAGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS CCA 72 bp TGGGAGACGGAGGAGCCGCGGCCCCTGGGGCGGCTCTaGGCGGGCGGGTACTCGCCGGTCCTGCAGGCAGTG +
Preference number: 6 (lower is better)
Translates to: WETEEPRPLGRL*AGGYSPVLQAV
Trigger: CACTGCCTGCAGGACCGGCGAGTACCCGCCCGCCCAGAGCCGCCCCAGGGGCCGCGGCTCCTCCGTCTCCCA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502854.5
ENST00000510358.5
CDS CCA 72 bp CGAACTGGTGGCCCCAGCCGGCCACCTGGCAGAGCGTaGTCTCGGAGGGTCGCGCGGCGCCGCTTGGCAGGC +
Preference number: 6 (lower is better)
Translates to: RTGGPSRPPGRA*SRRVARRRLAG
Trigger: GCCTGCCAAGCGGCGCCGCGCGACCCTCCGAGACCACGCTCTGCCAGGTGGCCGGCTGGGGCCACCAGTTCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253496.4
ENST00000502854.5
ENST00000504406.5
ENST00000510358.5
ENST00000514943.1
CDS TCA 72 bp TTCGGCGGTGCCGGCTGCGCGGGCATGAGTGGGACATaGAGCCTAGGGGACACCGGGGTCGGAGGCGCCGCC +
Preference number: 6 (lower is better)
Translates to: FGGAGCAGMSGT*SLGDTGVGGAA
Trigger: GGCGGCGCCTCCGACCCCGGTGTCCCCTAGGCTTCATGTCCCACTCATGCCCGCGCAGCCGGCACCGCCGAA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253496.4
ENST00000502854.5
ENST00000503736.1
ENST00000510358.5
CDS GCA 72 bp GAAGGTAGGGCACGGGTTCGGGTGCAGCGTGGAAGCTaGGCTGGGAGACGGAGGAGCCGCGGCCCCTGGGGC +
Preference number: 6 (lower is better)
Translates to: EGRARVRVQRGS*AGRRRSRGPWG
Trigger: GCCCCAGGGGCCGCGGCTCCTCCGTCTCCCAGCGCAGCTTCCACGCTGCACCCGAACCCGTGCCCTACCTTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502854.5
ENST00000510358.5
CDS CCA 72 bp AGGCGGTGGCCCTCCACCTCTAGGCAGCGACCCCCATaGAGGCACGGGTTGGTGCGGCAGGCCTGGCTGGCC +
Preference number: 6 (lower is better)
Translates to: RRWPSTSRQRPP*RHGLVRQAWLA
Trigger: GGCCAGCCAGGCCTGCCGCACCAACCCGTGCCTCCATGGGGGTCGCTGCCTAGAGGTGGAGGGCCACCGCCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS CCA 72 bp TGCGGAGCCGCTGCCCGCAGCTCAGTGGGCCGTTCCTaGTCAGGGAAGGCGGCTGCTCCCGCTTCGCCGGCA +
Preference number: 6 (lower is better)
Translates to: CGAAARSSVGRS*SGKAAAPASPA
Trigger: TGCCGGCGAAGCGGGAGCAGCCGCCTTCCCTGACCAGGAACGGCCCACTGAGCTGCGGGCAGCGGCTCCGCA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253496.4
ENST00000502854.5
ENST00000503736.1
ENST00000510358.5
CDS CAA 90 bp CGGCCACCTGGCAGAGCGTGGTCTCGGAGGGTCGCGCGGCGCCGCTaGGCAGGCACACCGGCTGAACGTAAGGCGACAGGAGCGCGCAGC +
Preference number: 6 (lower is better)
Translates to: RPPGRAWSRRVARRR*AGTPAERKATGARS
Trigger: GCTGCGCGCTCCTGTCGCCTTACGTTCAGCCGGTGTGCCTGCCAAGCGGCGCCGCGCGACCCTCCGAGACCACGCTCTGCCAGGTGGCCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253496.4
ENST00000502854.5
ENST00000504406.5
ENST00000510358.5
ENST00000514943.1
CDS CAA 90 bp CGGGTTCCGGCAGAAGGCGTGGCCGCCCAGTCCCCAGTTCCGCGCTaGCTCGGCAGTCACGTTCCGGTAGGTGGCCTCCGAGGCCCACGG +
Preference number: 6 (lower is better)
Translates to: RVPAEGVAAQSPVPR*LGSHVPVGGLRGPR
Trigger: CCGTGGGCCTCGGAGGCCACCTACCGGAACGTGACTGCCGAGCAAGCGCGGAACTGGGGACTGGGCGGCCACGCCTTCTGCCGGAACCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS TCA 72 bp CGGGGCGCCCCCACGCACCCAGGTCGTGCTGGTAGCTaGCGGGCGAGAAGGCCTCGTGCAAGCGGTAGGAGC +
Preference number: 6 (lower is better)
Translates to: RGAPTHPGRAGS*RARRPRASGRS
Trigger: GCTCCTACCGCTTGCACGAGGCCTTCTCGCCCGTCAGCTACCAGCACGACCTGGGTGCGTGGGGGCGCCCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504406.5
CDS GCA 72 bp CAGCTCAGTGGGCCGTTCCTGGTCAGGGAAGGCGGCTaGTCCCGCTTCGCCGGCAAGGCTCCCGGGGTCTGG +
Preference number: 6 (lower is better)
Translates to: QLSGPFLVREGG*SRFAGKAPGVW
Trigger: CCAGACCCCGGGAGCCTTGCCGGCGAAGCGGGAGCAGCCGCCTTCCCTGACCAGGAACGGCCCACTGAGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253496.4
ENST00000502854.5
ENST00000503736.1
CDS CCA 72 bp AGGCGGTGGCCCTCCACCTCTAGGCAGCGACCCCCATaGAGGCACGGGTTGGTGCGGCAGGCTTGGGGAGGG +
Preference number: 6 (lower is better)
Translates to: RRWPSTSRQRPP*RHGLVRQAWGG
Trigger: CCCTCCCCAAGCCTGCCGCACCAACCCGTGCCTCCATGGGGGTCGCTGCCTAGAGGTGGAGGGCCACCGCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503736.1
CDS GCA 72 bp CATCGGTGCCGCCCTCGAGGAACCCTGCGCAGAGCATaGCGGGGAGGATGGAGGATCCGTGCACGTCCGGGG +
Preference number: 6 (lower is better)
Translates to: HRCRPRGTLRRA*RGGWRIRARPG
Trigger: CCCCGGACGTGCACGGATCCTCCATCCTCCCCGGCATGCTCTGCGCAGGGTTCCTCGAGGGCGGCACCGATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253496.4
ENST00000502854.5
ENST00000504406.5
ENST00000510358.5
CDS CCA 72 bp AGTTCCGCGCTTGCTCGGCAGTCACGTTCCGGTAGGTaGCCTCCGAGGCCCACGGCTGACAGGGCGCACCCG +
Preference number: 6 (lower is better)
Translates to: SSALARQSRSGR*PPRPTADRAHP
Trigger: CGGGTGCGCCCTGTCAGCCGTGGGCCTCGGAGGCCACCTACCGGAACGTGACTGCCGAGCAAGCGCGGAACT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS CCA 72 bp CTGAGGCTTCGGCGGTGCCGGCTGCGCGGGCATGAGTaGGACATGAAGCCTAGGGGACACCGGGGTCGGAGG +
Preference number: 6 (lower is better)
Translates to: LRLRRCRLRGHE*DMKPRGHRGRR
Trigger: CCTCCGACCCCGGTGTCCCCTAGGCTTCATGTCCCACTCATGCCCGCGCAGCCGGCACCGCCGAAGCCTCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253496.4
ENST00000502854.5
ENST00000503736.1
ENST00000510358.5
CDS CAA 90 bp AGCGCCACCAGCCCGCCAACGACGCGGGTCATCGAAGACAGACTCTaGCGGAGCCGCTGCCCGCAGCTCAGTGGGCCGTTCCTGGTCAGG +
Preference number: 6 (lower is better)
Translates to: SATSPPTTRVIEDRL*RSRCPQLSGPFLVR
Trigger: CCTGACCAGGAACGGCCCACTGAGCTGCGGGCAGCGGCTCCGCAAGAGTCTGTCTTCGATGACCCGCGTCGTTGGCGGGCTGGTGGCGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253496.4
ENST00000502854.5
ENST00000503736.1
ENST00000510358.5
CDS GCA 72 bp GCCCGCCAACGACGCGGGTCATCGAAGACAGACTCTTaGGGAGCCGCTGCCCGCAGCTCAGTGGGCCGTTCC +
Preference number: 6 (lower is better)
Translates to: ARQRRGSSKTDS*GAAARSSVGRS
Trigger: GGAACGGCCCACTGAGCTGCGGGCAGCGGCTCCGCAAGAGTCTGTCTTCGATGACCCGCGTCGTTGGCGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253496.4
ENST00000502854.5
ENST00000503736.1
ENST00000510358.5
CDS GCA 72 bp CAGCTCAGTGGGCCGTTCCTGGTCAGGGAAGGCGGCTaGTCCCGCTTCGCCGGCAAGGCTGTGGAGGAGCAG +
Preference number: 6 (lower is better)
Translates to: QLSGPFLVREGG*SRFAGKAVEEQ
Trigger: CTGCTCCTCCACAGCCTTGCCGGCGAAGCGGGAGCAGCCGCCTTCCCTGACCAGGAACGGCCCACTGAGCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510358.5
CDS CCA 72 bp CACGGGTTGGTGCGGCAGGCCTGGCTGGCCAGCCGCTaGCAGTGGGCATCAGGACCCTTGCACTGGCATCTG +
Preference number: 6 (lower is better)
Translates to: HGLVRQAWLASR*QWASGPLHWHL
Trigger: CAGATGCCAGTGCAAGGGTCCTGATGCCCACTGCCAGCGGCTGGCCAGCCAGGCCTGCCGCACCAACCCGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS CCA 72 bp AGACAGACTCTTGCGGAGCCGCTGCCCGCAGCTCAGTaGGCCGTTCCTGGTCAGGGAAGGCGGCTGCTCCCG +
Preference number: 6 (lower is better)
Translates to: RQTLAEPLPAAQ*AVPGQGRRLLP
Trigger: CGGGAGCAGCCGCCTTCCCTGACCAGGAACGGCCCACTGAGCTGCGGGCAGCGGCTCCGCAAGAGTCTGTCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253496.4
ENST00000502854.5
ENST00000503736.1
ENST00000510358.5
CDS CCA 72 bp CCTCGAGGAACCCTGCGCAGAGCATGCCGGGGAGGATaGAGGATCCGTGCACGTCCGGGGCTGAGCAGCGCT +
Preference number: 6 (lower is better)
Translates to: PRGTLRRACRGG*RIRARPGLSSA
Trigger: AGCGCTGCTCAGCCCCGGACGTGCACGGATCCTCCATCCTCCCCGGCATGCTCTGCGCAGGGTTCCTCGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253496.4
ENST00000502854.5
ENST00000504406.5
ENST00000510358.5
CDS CAA 72 bp GCAGAAGGCGTGGCCGCCCAGTCCCCAGTTCCGCGCTaGCTCGGCAGTCACGTTCCGGTAGGTGGCCTCCGA +
Preference number: 6 (lower is better)
Translates to: AEGVAAQSPVPR*LGSHVPVGGLR
Trigger: TCGGAGGCCACCTACCGGAACGTGACTGCCGAGCAAGCGCGGAACTGGGGACTGGGCGGCCACGCCTTCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS TCA 72 bp CACCCGAGAGCGTGGTCCTGGCCAGGCCGCGGTAGCTaGGCCCGCGGCCATCATAGCAGCTTGCCTTGGTGT +
Preference number: 6 (lower is better)
Translates to: HPRAWSWPGRGS*ARGHHSSLPWC
Trigger: ACACCAAGGCAAGCTGCTATGATGGCCGCGGGCTCAGCTACCGCGGCCTGGCCAGGACCACGCTCTCGGGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS CCA 72 bp GTCTGGCACGGCTCACAGCTGTGGTTACGGCGTTCCTaGCCGAGCACCACCGTCAGATCCTCGGGTGCGGGC +
Preference number: 6 (lower is better)
Translates to: VWHGSQLWLRRS*PSTTVRSSGAG
Trigger: GCCCGCACCCGAGGATCTGACGGTGGTGCTCGGCCAGGAACGCCGTAACCACAGCTGTGAGCCGTGCCAGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253496.4
ENST00000502854.5
ENST00000503736.1
ENST00000504406.5
ENST00000510358.5
CDS CAA 72 bp AGCCCGCCAACGACGCGGGTCATCGAAGACAGACTCTaGCGGAGCCGCTGCCCGCAGCTCAGTGGGCCGTTC +
Preference number: 6 (lower is better)
Translates to: SPPTTRVIEDRL*RSRCPQLSGPF
Trigger: GAACGGCCCACTGAGCTGCGGGCAGCGGCTCCGCAAGAGTCTGTCTTCGATGACCCGCGTCGTTGGCGGGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253496.4
ENST00000502854.5
ENST00000503736.1
ENST00000510358.5
CDS GCA 72 bp CCAGCTGATGATGCCTTGCAGGGTGAGCCGGCGCTCTaGAGCTTGGTCCTCACACACCAGCGGGCCTCCGGA +
Preference number: 6 (lower is better)
Translates to: PADDALQGEPAL*SLVLTHQRASG
Trigger: TCCGGAGGCCCGCTGGTGTGTGAGGACCAAGCTGCAGAGCGCCGGCTCACCCTGCAAGGCATCATCAGCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253496.4
ENST00000502854.5
ENST00000504406.5
ENST00000510358.5
CDS CCA 72 bp GAGCGCACGGCCAACGTCTGGCACGGCTCACAGCTGTaGTTACGGCGTTCCTGGCCGAGCACCACCGTCAGA +
Preference number: 6 (lower is better)
Translates to: ERTANVWHGSQL*LRRSWPSTTVR
Trigger: TCTGACGGTGGTGCTCGGCCAGGAACGCCGTAACCACAGCTGTGAGCCGTGCCAGACGTTGGCCGTGCGCTC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253496.4
ENST00000502854.5
ENST00000503736.1
ENST00000504406.5
ENST00000510358.5
CDS CCA 72 bp GAGAGGCAGCGCTCTCAGACCTGGCCACAAGCGTTCTaGGGAAGCCCCCTGCTCCCGAACCCCAATCCCGTG +
Preference number: 6 (lower is better)
Translates to: ERQRSQTWPQAF*GSPLLPNPNPV
Trigger: CACGGGATTGGGGTTCGGGAGCAGGGGGCTTCCCCAGAACGCTTGTGGCCAGGTCTGAGAGCGCTGCCTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502854.5
ENST00000504406.5
ENST00000510358.5
CDS TCA 72 bp CCTGAAGGCGCAACAGAGCCAGGTCGTGCTGGTAGCTaGCGGGCGAGAAGGCCTCGTGCAAGCGGTAGGAGC +
Preference number: 6 (lower is better)
Translates to: PEGATEPGRAGS*RARRPRASGRS
Trigger: GCTCCTACCGCTTGCACGAGGCCTTCTCGCCCGTCAGCTACCAGCACGACCTGGCTCTGTTGCGCCTTCAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253496.4
ENST00000502854.5
ENST00000510358.5
CDS GCA 72 bp ACGCGGGTCATCGAAGACAGACTCTTGCGGAGCCGCTaGCCGCAGCTCAGTGGGCCGTTCCTGGTCAGGGAA +
Preference number: 6 (lower is better)
Translates to: TRVIEDRLLRSR*PQLSGPFLVRE
Trigger: TTCCCTGACCAGGAACGGCCCACTGAGCTGCGGGCAGCGGCTCCGCAAGAGTCTGTCTTCGATGACCCGCGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253496.4
ENST00000502854.5
ENST00000503736.1
ENST00000510358.5
CDS GCA 72 bp ACACCGGCTGAACGTAAGGCGACAGGAGCGCGCAGCTaGCGTCCGCATCCTCCTGAAGGCGCAACAGAGCCA +
Preference number: 6 (lower is better)
Translates to: TPAERKATGARS*RPHPPEGATEP
Trigger: TGGCTCTGTTGCGCCTTCAGGAGGATGCGGACGGCAGCTGCGCGCTCCTGTCGCCTTACGTTCAGCCGGTGT
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253496.4
ENST00000502854.5
ENST00000510358.5
ENST00000514943.1
CDS GCA 72 bp CAGCGCTCCAGGGAGAGGAACGGTACCTGCGCCTCCTaGAGGAAGCTGGCATATTCCTCCGCCCCCTCGAAC +
Preference number: 6 (lower is better)
Translates to: QRSRERNGTCAS*RKLAYSSAPSN
Trigger: GTTCGAGGGGGCGGAGGAATATGCCAGCTTCCTGCAGGAGGCGCAGGTACCGTTCCTCTCCCTGGAGCGCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253496.4
ENST00000502854.5
ENST00000504406.5
ENST00000510358.5
CDS GCA 72 bp CAGCGCTCCAGGGAGAGGAACGGTACCTGCGCCTCCTaGAGGAAGCTGGCATATTCCTCCGCCCCTGCGAAC +
Preference number: 6 (lower is better)
Translates to: QRSRERNGTCAS*RKLAYSSAPAN
Trigger: GTTCGCAGGGGCGGAGGAATATGCCAGCTTCCTGCAGGAGGCGCAGGTACCGTTCCTCTCCCTGGAGCGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514943.1
CDS GCA 72 bp ACACCGGCTGAACGTAAGGCGACAGGAGCGCGCAGCTaGCGTCCGCATCCTCCTGAAGGCGCAACAGAGCTA +
Preference number: 6 (lower is better)
Translates to: TPAERKATGARS*RPHPPEGATEL
Trigger: TAGCTCTGTTGCGCCTTCAGGAGGATGCGGACGGCAGCTGCGCGCTCCTGTCGCCTTACGTTCAGCCGGTGT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504406.5
CDS CCA 72 bp CCAGGCCAGGTAGTAGGCCACATCGGTGTAGACGCCTaGCTTGTTGCGGTCACCACAGCCCGATCCCCAGCT +
Preference number: 6 (lower is better)
Translates to: PGQVVGHIGVDA*LVAVTTARSPA
Trigger: AGCTGGGGATCGGGCTGTGGTGACCGCAACAAGCCAGGCGTCTACACCGATGTGGCCTACTACCTGGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253496.4
ENST00000502854.5
ENST00000504406.5
ENST00000510358.5
CDS GCA 72 bp ACAGAGCGCCTTCTTCACACCCCATCTGACAACGCTTaGCGCCCGGACGATGGACAAAGCTGCTCCAGGCGC +
Preference number: 6 (lower is better)
Translates to: TERLLHTPSDNA*RPDDGQSCSRR
Trigger: GCGCCTGGAGCAGCTTTGTCCATCGTCCGGGCGGCAAGCGTTGTCAGATGGGGTGTGAAGAAGGCGCTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514943.1
CDS TCA 72 bp CCCTGCGAACACAGAGCGCCTTCTTCACACCCCATCTaGCAACGCTTGCCGCCCGGACGATGGACAAAGCTG +
Preference number: 6 (lower is better)
Translates to: PCEHRAPSSHPI*QRLPPGRWTKL
Trigger: CAGCTTTGTCCATCGTCCGGGCGGCAAGCGTTGTCAGATGGGGTGTGAAGAAGGCGCTCTGTGTTCGCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514943.1
CDS CCA 72 bp AAAGTTGGGGGTGGTAGCACACCAGGGCTGAGGGCCTaGCCGGCCCTTGTGGGTACATTTGTGGTACAGCTG +
Preference number: 6 (lower is better)
Translates to: KVGGGSTPGLRA*PALVGTFVVQL
Trigger: CAGCTGTACCACAAATGTACCCACAAGGGCCGGCCAGGCCCTCAGCCCTGGTGTGCTACCACCCCCAACTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS CCA 72 bp AGTGAGGTGTTGTGGACAGAGACAGTGGGGGCCGCTTaGCATGTTCACACAGGTCCCTCCTTTCTGGCAGGG +
Preference number: 6 (lower is better)
Translates to: SEVLWTETVGAA*HVHTGPSFLAG
Trigger: CCCTGCCAGAAAGGAGGGACCTGTGTGAACATGCCAAGCGGCCCCCACTGTCTCTGTCCACAACACCTCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS TCA 72 bp CACTGCGGAATCACCAAGGAGGGAAAGATGAGTCCCTaGGCAATCAGGAAACGGTGTGCTCCCGGATCCAGG +
Preference number: 6 (lower is better)
Translates to: HCGITKEGKMSP*AIRKRCAPGSR
Trigger: CCTGGATCCGGGAGCACACCGTTTCCTGATTGCTCAGGGACTCATCTTTCCCTCCTTGGTGATTCCGCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253496.4
ENST00000502854.5
ENST00000504406.5
ENST00000510358.5
CDS TCA 72 bp CACTCTCTCACTGCGGAATCACCAAGGAGGGAAAGATaGGTCCCTGAGCAATCAGGAAACGGTGTGCTCCCG +
Preference number: 6 (lower is better)
Translates to: HSLTAESPRRER*VPEQSGNGVLP
Trigger: CGGGAGCACACCGTTTCCTGATTGCTCAGGGACTCATCTTTCCCTCCTTGGTGATTCCGCAGTGAGAGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253496.4
ENST00000502854.5
ENST00000504406.5
ENST00000510358.5
CDS CCA 72 bp CTTCTCTTTCTGGCAGTGGTTTCCAGTGAGGTGTTGTaGACAGAGACAGTGGGGGCCGCTTGGCATGTTCAC +
Preference number: 6 (lower is better)
Translates to: LLFLAVVSSEVL*TETVGAAWHVH
Trigger: GTGAACATGCCAAGCGGCCCCCACTGTCTCTGTCCACAACACCTCACTGGAAACCACTGCCAGAAAGAGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS CCA 72 bp GCTGGCAGTGGGCATCAGGACCCTTGCACTGGCATCTaGCCACAGCTGCTTGCTCAGTTCTATACCATATCT +
Preference number: 6 (lower is better)
Translates to: AGSGHQDPCTGI*PQLLAQFYTIS
Trigger: AGATATGGTATAGAACTGAGCAAGCAGCTGTGGCCAGATGCCAGTGCAAGGGTCCTGATGCCCACTGCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS CAA 72 bp GCACTTCTCTTTCTGGCAGTGGTTTCCAGTGAGGTGTaGTGGACAGAGACAGTGGGGGCCGCTTGGCATGTT +
Preference number: 6 (lower is better)
Translates to: ALLFLAVVSSEV*WTETVGAAWHV
Trigger: AACATGCCAAGCGGCCCCCACTGTCTCTGTCCACAACACCTCACTGGAAACCACTGCCAGAAAGAGAAGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS CAA 90 bp AGGCTCAAAGCACTTCTCTTTCTGGCAGTGGTTTCCAGTGAGGTGTaGTGGACAGAGACAGTGGGGGCCGCTTGGCATGTTCACACAGGT +
Preference number: 6 (lower is better)
Translates to: RLKALLFLAVVSSEV*WTETVGAAWHVHTG
Trigger: ACCTGTGTGAACATGCCAAGCGGCCCCCACTGTCTCTGTCCACAACACCTCACTGGAAACCACTGCCAGAAAGAGAAGTGCTTTGAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS CAA 72 bp CCGGTGACAGTGAGAACGACTGTGTGCTCTTCAGCTTaGTACTTATGCTCCTTGGGGGCTTCCCAAGGTGGA +
Preference number: 6 (lower is better)
Translates to: PVTVRTTVCSSA*YLCSLGASQGG
Trigger: TCCACCTTGGGAAGCCCCCAAGGAGCATAAGTACAAAGCTGAAGAGCACACAGTCGTTCTCACTGTCACCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS GCA 72 bp GGCATCAGGACCCTTGCACTGGCATCTGGCCACAGCTaGTTGCTCAGTTCTATACCATATCTCATTCTTGTG +
Preference number: 6 (lower is better)
Translates to: GIRTLALASGHS*LLSSIPYLILV
Trigger: CACAAGAATGAGATATGGTATAGAACTGAGCAAGCAGCTGTGGCCAGATGCCAGTGCAAGGGTCCTGATGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS CAA 90 bp ACAGTGAGAACGACTGTGTGCTCTTCAGCTTTGTACTTATGCTCCTaGGGGGCTTCCCAAGGTGGAATCGAAAGTGTTGACTCCAAGCTC +
Preference number: 6 (lower is better)
Translates to: TVRTTVCSSALYLCS*GASQGGIESVDSKL
Trigger: GAGCTTGGAGTCAACACTTTCGATTCCACCTTGGGAAGCCCCCAAGGAGCATAAGTACAAAGCTGAAGAGCACACAGTCGTTCTCACTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253496.4
CDS CAA 72 bp ACGACTGTGTGCTCTTCAGCTTTGTACTTATGCTCCTaGGGGGCTTCCCAAGGTGGAATCGAAAGTGTTGAC +
Preference number: 6 (lower is better)
Translates to: TTVCSSALYLCS*GASQGGIESVD
Trigger: GTCAACACTTTCGATTCCACCTTGGGAAGCCCCCAAGGAGCATAAGTACAAAGCTGAAGAGCACACAGTCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253496.4