RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for F11R (Homo sapiens)

Ensembl gene IDs: ENSG00000158769

Ensembl transcript IDs: ENST00000335772.3, ENST00000368026.11, ENST00000472573.5, ENST00000537746.1, ENST00000602966.1, ENST00000621309.4

Found 290 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGTATTCAGGAGGACAGGGCAGAGGGATCCCAGTGGCACTTCCCATaGGAAGACAGAAGAGAGTGGGCCCCAGAGATGGAAGGACCCCAG +
Preference number: 1 (lower is better)
Translates to: CIQEDRAEGSQWHFP*EDRREWAPEMEGPQ
Trigger: CTGGGGTCCTTCCATCTCTGGGGCCCACTCTCTTCTGTCTTCCCATGGGAAGTGCCACTGGGATCCCTCTGCCCTGTCCTCCTGAATACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
3UTR CCA 90 bp GCAGAGGGATCCCAGTGGCACTTCCCATGGGAAGACAGAAGAGAGTaGGCCCCAGAGATGGAAGGACCCCAGTGTCATCACCAAACAACC +
Preference number: 1 (lower is better)
Translates to: AEGSQWHFPWEDRRE*APEMEGPQCHHQTT
Trigger: GGTTGTTTGGTGATGACACTGGGGTCCTTCCATCTCTGGGGCCCACTCTCTTCTGTCTTCCCATGGGAAGTGCCACTGGGATCCCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
3UTR CCA 90 bp TGTCAGTCAGCTTGTATTCAGGAGGACAGGGCAGAGGGATCCCAGTaGCACTTCCCATGGGAAGACAGAAGAGAGTGGGCCCCAGAGATG +
Preference number: 1 (lower is better)
Translates to: CQSACIQEDRAEGSQ*HFPWEDRREWAPEM
Trigger: CATCTCTGGGGCCCACTCTCTTCTGTCTTCCCATGGGAAGTGCCACTGGGATCCCTCTGCCCTGTCCTCCTGAATACAAGCTGACTGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
3UTR TCA 90 bp CCTTCCTCCAGCAAAGGAAGGCCTGGCCACAAGAGGGCTCTGGAATaGAGGCCTGAAATTCAGAAGCTCTGCCTTGAGATAAGAACCAGG +
Preference number: 1 (lower is better)
Translates to: PSSSKGRPGHKRALE*RPEIQKLCLEIRTR
Trigger: CCTGGTTCTTATCTCAAGGCAGAGCTTCTGAATTTCAGGCCTTCATTCCAGAGCCCTCTTGTGGCCAGGCCTTCCTTTGCTGGAGGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
3UTR TCA 90 bp GCTCAAGATACCTATTCAAAGATCCCTGCCAGCCAGGTGGGCAGTTaGGTGCAGATTCCTGCGACCCCCGCCATTTTTGCTGTCTACTTA +
Preference number: 1 (lower is better)
Translates to: AQDTYSKIPASQVGS*VQIPATPAIFAVYL
Trigger: TAAGTAGACAGCAAAAATGGCGGGGGTCGCAGGAATCTGCACTCAACTGCCCACCTGGCTGGCAGGGATCTTTGAATAGGTATCTTGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
3UTR TCA 90 bp ACAGTAGTTCCTACAGCTGTAGGGAGGTCTGTTAATGCACCTGGCTaGACAGGAGGTACAAGAGTAAGTACCTTCTCTCACTTGGTGGAA +
Preference number: 1 (lower is better)
Translates to: TVVPTAVGRSVNAPG*TGGTRVSTFSHLVE
Trigger: TTCCACCAAGTGAGAGAAGGTACTTACTCTTGTACCTCCTGTTCAGCCAGGTGCATTAACAGACCTCCCTACAGCTGTAGGAACTACTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
3UTR TCA 90 bp CAGGCTGTCCGGCTCATTCCTGTTCATTCACATGCAGACCACCCATaGTCTGGTCTTCAAATTTCTTCTGAATTCCACCCCACTAAATAC +
Preference number: 1 (lower is better)
Translates to: QAVRLIPVHSHADHP*SGLQISSEFHPTKY
Trigger: GTATTTAGTGGGGTGGAATTCAGAAGAAATTTGAAGACCAGATCATGGGTGGTCTGCATGTGAATGAACAGGAATGAGCCGGACAGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
3UTR CCA 90 bp AAGTCAATGGCATACCCAGGATTCCTTCCTGATCCCTCAAAGAAATaGGGAATAAACACTTTAAACAAGTTCCAGGCCACTCAGCAGTGG +
Preference number: 1 (lower is better)
Translates to: KSMAYPGFLPDPSKK*GINTLNKFQATQQW
Trigger: CCACTGCTGAGTGGCCTGGAACTTGTTTAAAGTGTTTATTCCCCATTTCTTTGAGGGATCAGGAAGGAATCCTGGGTATGCCATTGACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
3UTR TCA 90 bp AGCAGTTACTACTTTAAACTACTACTAAAGCACTTGTTCTCCAAATaGCCTGAGAAATCCCCTTGCCTCAGCTCTGGGACAGTAGTTCCT +
Preference number: 1 (lower is better)
Translates to: SSYYFKLLLKHLFSK*PEKSPCLSSGTVVP
Trigger: AGGAACTACTGTCCCAGAGCTGAGGCAAGGGGATTTCTCAGGTCATTTGGAGAACAAGTGCTTTAGTAGTAGTTTAAAGTAGTAACTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
3UTR TCA 90 bp TGTCTACTTAGAAGGGAAGTCAATGGCATACCCAGGATTCCTTCCTaGTCCCTCAAAGAAATGGGGAATAAACACTTTAAACAAGTTCCA +
Preference number: 1 (lower is better)
Translates to: CLLRREVNGIPRIPS*SLKEMGNKHFKQVP
Trigger: TGGAACTTGTTTAAAGTGTTTATTCCCCATTTCTTTGAGGGATCAGGAAGGAATCCTGGGTATGCCATTGACTTCCCTTCTAAGTAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
3UTR-3UTR GCA 90 bp CCTGGTCGTCAGTACACAAGGAAAGAGCCCAGAACCAAGCTCAAGATACCTATTAGGTGGGCAGTTGAGTaGAGATTCCTGCGACCCCCG +
Preference number: 2 (lower is better)
Translates to: PGRQYTRKEPRTKLKIPIRWAVE*RFLRPP
Trigger: CGGGGGTCGCAGGAATCTGCACTCAACTGCCCACCT...AATAGGTATCTTGAGCTTGGTTCTGGGCTCTTTCCTTGTGTACTGACGACCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
3UTR CAA 90 bp AGCTCAAGATACCTATTCAAAGATCCCTGCCAGCCAGGTGGGCAGTaGAGTGCAGATTCCTGCGACCCCCGCCATTTTTGCTGTCTACTT +
Preference number: 2 (lower is better)
Translates to: SSRYLFKDPCQPGGQ*SADSCDPRHFCCLL
Trigger: AAGTAGACAGCAAAAATGGCGGGGGTCGCAGGAATCTGCACTCAACTGCCCACCTGGCTGGCAGGGATCTTTGAATAGGTATCTTGAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
3UTR-3UTR GCA 90 bp GGTCGTCAGTACACAAGGAAAGAGCCCAGAACCAAGCTCAAGATACCTATTCAAAGGTGGGCAGTTGAGTaGAGATTCCTGCGACCCCCG +
Preference number: 2 (lower is better)
Translates to: GRQYTRKEPRTKLKIPIQRWAVE*RFLRPP
Trigger: CGGGGGTCGCAGGAATCTGCACTCAACTGCCCACCT...TTGAATAGGTATCTTGAGCTTGGTTCTGGGCTCTTTCCTTGTGTACTGACGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
3UTR-3UTR TCA 90 bp GGGAAGTCAATGGCATACCCAGGATTCCTTCCTGATCCCTCAAAGAAATGGGGAGAGTCCGGTAGCACCTaGGTAAGGCAAATGCAGATG +
Preference number: 2 (lower is better)
Translates to: GKSMAYPGFLPDPSKKWGESGST*VRQMQM
Trigger: CATCTGCATTTGCCTTACTCAGGTGCTACCGGACTC...TCCCCATTTCTTTGAGGGATCAGGAAGGAATCCTGGGTATGCCATTGACTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
3UTR-3UTR TCA 90 bp TGTACAAAGGAGCCTAGGAACCCTCAAAGACCTTTTCCCCTACTTACTTCCCACGAGTCCGGTAGCACCTaGGTAAGGCAAATGCAGATG +
Preference number: 2 (lower is better)
Translates to: CTKEPRNPQRPFPLLTSHESGST*VRQMQM
Trigger: CATCTGCATTTGCCTTACTCAGGTGCTACCGGACTC...GTGGGAAGTAAGTAGGGGAAAAGGTCTTTGAGGGTTCCTAGGCTCCTTTGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
3UTR-3UTR TCA 90 bp TGTACAAAGGAGCCTAGGAACCCTCAAAGACCTTTTCCCCTACTTACTTCCCACCCCAGGATTCCTTCCTaGTCCCTCAAAGAAATGGGG +
Preference number: 2 (lower is better)
Translates to: CTKEPRNPQRPFPLLTSHPRIPS*SLKEMG
Trigger: CCCCATTTCTTTGAGGGATCAGGAAGGAATCCTGGG...GTGGGAAGTAAGTAGGGGAAAAGGTCTTTGAGGGTTCCTAGGCTCCTTTGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
3UTR-3UTR TCA 90 bp CCTTGCCTCAGCTCTGGGACAGTAGTTCCTACAGCTGTAGGGAGGTCTGTTAATAAGAGGGCTCTGGAATaGAGGCCTGAAATTCAGAAG +
Preference number: 2 (lower is better)
Translates to: PCLSSGTVVPTAVGRSVNKRALE*RPEIQK
Trigger: CTTCTGAATTTCAGGCCTTCATTCCAGAGCCCTCTT...ATTAACAGACCTCCCTACAGCTGTAGGAACTACTGTCCCAGAGCTGAGGCAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
3UTR-3UTR CCA 90 bp ACAACACACACACAAGCTCAACAAAGAGCTAAGACCACTACACACATCTCCACAGCCTGCCTCAGCCTCTaGGATTATAGGCGTGAGCCA +
Preference number: 2 (lower is better)
Translates to: TTHTQAQQRAKTTTHISTACLSL*DYRREP
Trigger: TGGCTCACGCCTATAATCCCAGAGGCTGAGGCAGGC...TGTGGAGATGTGTGTAGTGGTCTTAGCTCTTTGTTGAGCTTGTGTGTGTGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
3UTR-3UTR TCA 90 bp GGTCGTCAGTACACAAGGAAAGAGCCCAGAACCAAGCTCAAGATACCTATTCAACCCAGGATTCCTTCCTaGTCCCTCAAAGAAATGGGG +
Preference number: 2 (lower is better)
Translates to: GRQYTRKEPRTKLKIPIQPRIPS*SLKEMG
Trigger: CCCCATTTCTTTGAGGGATCAGGAAGGAATCCTGGG...TTGAATAGGTATCTTGAGCTTGGTTCTGGGCTCTTTCCTTGTGTACTGACGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
3UTR-3UTR GCA 90 bp GGTCGTCAGTACACAAGGAAAGAGCCCAGAACCAAGCTCAAGATACCTATTCAATTGAGTGCAGATTCCTaGGACCCCCGCCATTTTTGC +
Preference number: 2 (lower is better)
Translates to: GRQYTRKEPRTKLKIPIQLSADS*DPRHFC
Trigger: GCAAAAATGGCGGGGGTCGCAGGAATCTGCACTCAA...TTGAATAGGTATCTTGAGCTTGGTTCTGGGCTCTTTCCTTGTGTACTGACGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
3UTR-3UTR CCA 90 bp AAGCTGTCCTCAGGCCCCAAGAAACATACTGTCCCCTCATTTAGAAACAGACTACCTTCTCTCACTTGGTaGAACAGGCCAAGGAGATCC +
Preference number: 2 (lower is better)
Translates to: KLSSGPKKHTVPSFRNRLPSLTW*NRPRRS
Trigger: GGATCTCCTTGGCCTGTTCCACCAAGTGAGAGAAGG...TAGTCTGTTTCTAAATGAGGGGACAGTATGTTTCTTGGGGCCTGAGGACAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
3UTR-3UTR TCA 90 bp CATTTTTGCTGTCTACTTAGAAGGGAAGTCAATGGCATACCCAGGATTCCTTCCGAGTCCGGTAGCACCTaGGTAAGGCAAATGCAGATG +
Preference number: 2 (lower is better)
Translates to: HFCCLLRREVNGIPRIPSESGST*VRQMQM
Trigger: CATCTGCATTTGCCTTACTCAGGTGCTACCGGACTC...GGAAGGAATCCTGGGTATGCCATTGACTTCCCTTCTAAGTAGACAGCAAAAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
3UTR-3UTR TCA 90 bp CAATTTCAGCATACAGCTAAGACTACACAACACACACACAAGCTCAACAAAGAGTTGTTGCCAGGCTCCTaGGCAGCTGGGATTACAGGC +
Preference number: 2 (lower is better)
Translates to: QFQHTAKTTQHTHKLNKELLPGS*AAGITG
Trigger: GCCTGTAATCCCAGCTGCTCAGGAGCCTGGCAACAA...CTCTTTGTTGAGCTTGTGTGTGTGTTGTGTAGTCTTAGCTGTATGCTGAAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
3UTR-3UTR TCA 90 bp CCTCAAATTCACAGAGCCATGAATCACCTCTGCTTCCCCATGACCTTTTCCATAGTTCTCCAAATGACCTaGGAAATCCCCTTGCCTCAG +
Preference number: 2 (lower is better)
Translates to: PQIHRAMNHLCFPMTFSIVLQMT*EIPLPQ
Trigger: CTGAGGCAAGGGGATTTCTCAGGTCATTTGGAGAAC...TATGGAAAAGGTCATGGGGAAGCAGAGGTGATTCATGGCTCTGTGAATTTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
3UTR-3UTR GCA 90 bp TGTACAAAGGAGCCTAGGAACCCTCAAAGACCTTTTCCCCTACTTACTTCCCACGACCCCCGCCATTTTTaGTGTCTACTTAGAAGGGAA +
Preference number: 2 (lower is better)
Translates to: CTKEPRNPQRPFPLLTSHDPRHF*CLLRRE
Trigger: TTCCCTTCTAAGTAGACAGCAAAAATGGCGGGGGTC...GTGGGAAGTAAGTAGGGGAAAAGGTCTTTGAGGGTTCCTAGGCTCCTTTGTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
3UTR-3UTR GCA 90 bp GATTATGCTGAGTTCATGTCTCAGGGGAAACACCAAAATCCATGGAACTGCTCTTTGAGTGCAGATTCCTaGGACCCCCGCCATTTTTGC +
Preference number: 2 (lower is better)
Translates to: DYAEFMSQGKHQNPWNCSLSADS*DPRHFC
Trigger: GCAAAAATGGCGGGGGTCGCAGGAATCTGCACTCAA...AGAGCAGTTCCATGGATTTTGGTGTTTCCCCTGAGACATGAACTCAGCATAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
3UTR-3UTR GCA 90 bp AAGCTGTCCTCAGGCCCCAAGAAACATACTGTCCCCTCATTTAGAAACAGACTAGCCATGAATCACCTCTaGTTCCCCATGACCTTTTCC +
Preference number: 2 (lower is better)
Translates to: KLSSGPKKHTVPSFRNRLAMNHL*FPMTFS
Trigger: GGAAAAGGTCATGGGGAAGCAGAGGTGATTCATGGC...TAGTCTGTTTCTAAATGAGGGGACAGTATGTTTCTTGGGGCCTGAGGACAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
3UTR-3UTR TCA 90 bp CCTCAAATTCACAGAGCCATGAATCACCTCTGCTTCCCCATGACCTTTTCCATATCTGGAATGAAGGCCTaGAATTCAGAAGCTCTGCCT +
Preference number: 2 (lower is better)
Translates to: PQIHRAMNHLCFPMTFSISGMKA*NSEALP
Trigger: AGGCAGAGCTTCTGAATTTCAGGCCTTCATTCCAGA...TATGGAAAAGGTCATGGGGAAGCAGAGGTGATTCATGGCTCTGTGAATTTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
3UTR-3UTR GCA 90 bp TACTTTATTAAGCTGTCCTCAGGCCCCAAGAAACATACTGTCCCCTCATTTAGACCTGAGAAATCCCCTTaGCTCAGCTCTGGGACAGTA +
Preference number: 2 (lower is better)
Translates to: YFIKLSSGPKKHTVPSFRPEKSP*LSSGTV
Trigger: TACTGTCCCAGAGCTGAGGCAAGGGGATTTCTCAGG...TCTAAATGAGGGGACAGTATGTTTCTTGGGGCCTGAGGACAGCTTAATAAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
3UTR-3UTR CCA 90 bp CAGAAGAGAGTGGGCCCCAGAGATGGAAGGACCCCAGTGTCATCACCAAACAACGATCCCTCAAAGAAATaGGGAATAAACACTTTAAAC +
Preference number: 2 (lower is better)
Translates to: QKRVGPRDGRTPVSSPNNDPSKK*GINTLN
Trigger: GTTTAAAGTGTTTATTCCCCATTTCTTTGAGGGATC...GTTGTTTGGTGATGACACTGGGGTCCTTCCATCTCTGGGGCCCACTCTCTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
3UTR-3UTR CCA 90 bp TACTTTATTAAGCTGTCCTCAGGCCCCAAGAAACATACTGTCCCCTCATTTAGACCTTCTCTCACTTGGTaGAACAGGCCAAGGAGATCC +
Preference number: 2 (lower is better)
Translates to: YFIKLSSGPKKHTVPSFRPSLTW*NRPRRS
Trigger: GGATCTCCTTGGCCTGTTCCACCAAGTGAGAGAAGG...TCTAAATGAGGGGACAGTATGTTTCTTGGGGCCTGAGGACAGCTTAATAAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
3UTR-3UTR CCA 90 bp TGCGACCCCCGCCATTTTTGCTGTCTACTTAGAAGGGAAGTCAATGGCATACCCGATCCCTCAAAGAAATaGGGAATAAACACTTTAAAC +
Preference number: 2 (lower is better)
Translates to: CDPRHFCCLLRREVNGIPDPSKK*GINTLN
Trigger: GTTTAAAGTGTTTATTCCCCATTTCTTTGAGGGATC...GGGTATGCCATTGACTTCCCTTCTAAGTAGACAGCAAAAATGGCGGGGGTCGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
3UTR-3UTR TCA 90 bp GATTATGCTGAGTTCATGTCTCAGGGGAAACACCAAAATCCATGGAACTGCTCTTGGCTTCAAGTTCTCTaGAAATTTACTATGCTCTCC +
Preference number: 2 (lower is better)
Translates to: DYAEFMSQGKHQNPWNCSWLQVL*KFTMLS
Trigger: GGAGAGCATAGTAAATTTTCAGAGAACTTGAAGCCA...AGAGCAGTTCCATGGATTTTGGTGTTTCCCCTGAGACATGAACTCAGCATAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
3UTR-3UTR GCA 90 bp GATTATGCTGAGTTCATGTCTCAGGGGAAACACCAAAATCCATGGAACTGCTCTTCTGAAAATTTACTATaGTCTCCACAACAAGAGCTC +
Preference number: 2 (lower is better)
Translates to: DYAEFMSQGKHQNPWNCSSENLL*SPQQEL
Trigger: GAGCTCTTGTTGTGGAGAGCATAGTAAATTTTCAGA...AGAGCAGTTCCATGGATTTTGGTGTTTCCCCTGAGACATGAACTCAGCATAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
3UTR CCA 72 bp GAGGACAGGGCAGAGGGATCCCAGTGGCACTTCCCATaGGAAGACAGAAGAGAGTGGGCCCCAGAGATGGAA +
Preference number: 3 (lower is better)
Translates to: EDRAEGSQWHFP*EDRREWAPEME
Trigger: TTCCATCTCTGGGGCCCACTCTCTTCTGTCTTCCCATGGGAAGTGCCACTGGGATCCCTCTGCCCTGTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
3UTR CCA 72 bp GCTTGTATTCAGGAGGACAGGGCAGAGGGATCCCAGTaGCACTTCCCATGGGAAGACAGAAGAGAGTGGGCC +
Preference number: 3 (lower is better)
Translates to: ACIQEDRAEGSQ*HFPWEDRREWA
Trigger: GGCCCACTCTCTTCTGTCTTCCCATGGGAAGTGCCACTGGGATCCCTCTGCCCTGTCCTCCTGAATACAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
3UTR TCA 72 bp AACTACAGACATCAGGGGCCAGAGTCCGGTAGCACCTaGGTAAGGCAAATGCAGATGATAGGCGGTGAGCCG +
Preference number: 3 (lower is better)
Translates to: NYRHQGPESGST*VRQMQMIGGEP
Trigger: CGGCTCACCGCCTATCATCTGCATTTGCCTTACTCAGGTGCTACCGGACTCTGGCCCCTGATGTCTGTAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
3UTR TCA 72 bp ACCTATTCAAAGATCCCTGCCAGCCAGGTGGGCAGTTaGGTGCAGATTCCTGCGACCCCCGCCATTTTTGCT +
Preference number: 3 (lower is better)
Translates to: TYSKIPASQVGS*VQIPATPAIFA
Trigger: AGCAAAAATGGCGGGGGTCGCAGGAATCTGCACTCAACTGCCCACCTGGCTGGCAGGGATCTTTGAATAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
3UTR GCA 72 bp ATTCAAAGATCCCTGCCAGCCAGGTGGGCAGTTGAGTaGAGATTCCTGCGACCCCCGCCATTTTTGCTGTCT +
Preference number: 3 (lower is better)
Translates to: IQRSLPARWAVE*RFLRPPPFLLS
Trigger: AGACAGCAAAAATGGCGGGGGTCGCAGGAATCTGCACTCAACTGCCCACCTGGCTGGCAGGGATCTTTGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
3UTR-3UTR CAA 90 bp GATTATGCTGAGTTCATGTCTCAGGGGAAACACCAAAATCCATGGAACTGCTCTGGAACCAGCCCCAGGTaGCTGGGAAGCAAGGCTTTG +
Preference number: 3 (lower is better)
Translates to: DYAEFMSQGKHQNPWNCSGTSPR*LGSKAL
Trigger: CAAAGCCTTGCTTCCCAGCAACCTGGGGCTGGTTCC...AGAGCAGTTCCATGGATTTTGGTGTTTCCCCTGAGACATGAACTCAGCATAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
3UTR TCA 72 bp AGCAAAGGAAGGCCTGGCCACAAGAGGGCTCTGGAATaGAGGCCTGAAATTCAGAAGCTCTGCCTTGAGATA +
Preference number: 3 (lower is better)
Translates to: SKGRPGHKRALE*RPEIQKLCLEI
Trigger: TATCTCAAGGCAGAGCTTCTGAATTTCAGGCCTTCATTCCAGAGCCCTCTTGTGGCCAGGCCTTCCTTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
3UTR TCA 72 bp CCTACAGCTGTAGGGAGGTCTGTTAATGCACCTGGCTaGACAGGAGGTACAAGAGTAAGTACCTTCTCTCAC +
Preference number: 3 (lower is better)
Translates to: PTAVGRSVNAPG*TGGTRVSTFSH
Trigger: GTGAGAGAAGGTACTTACTCTTGTACCTCCTGTTCAGCCAGGTGCATTAACAGACCTCCCTACAGCTGTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
3UTR-3UTR CAA 90 bp AAGCTGTCCTCAGGCCCCAAGAAACATACTGTCCCCTCATTTAGAAACAGACTAAGGCAAGAGAATTGCTaGAACCCAGGAGGTGGAGGT +
Preference number: 3 (lower is better)
Translates to: KLSSGPKKHTVPSFRNRLRQENC*NPGGGG
Trigger: ACCTCCACCTCCTGGGTTCAAGCAATTCTCTTGCCT...TAGTCTGTTTCTAAATGAGGGGACAGTATGTTTCTTGGGGCCTGAGGACAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
3UTR-3UTR CAA 90 bp ACAACACACACACAAGCTCAACAAAGAGCTAAGACCACTACACACATCTCCACATCAATGTCAGTCAGCTaGTATTCAGGAGGACAGGGC +
Preference number: 3 (lower is better)
Translates to: TTHTQAQQRAKTTTHISTSMSVS*YSGGQG
Trigger: GCCCTGTCCTCCTGAATACAAGCTGACTGACATTGA...TGTGGAGATGTGTGTAGTGGTCTTAGCTCTTTGTTGAGCTTGTGTGTGTGTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
3UTR TCA 72 bp CGGCTCATTCCTGTTCATTCACATGCAGACCACCCATaGTCTGGTCTTCAAATTTCTTCTGAATTCCACCCC +
Preference number: 3 (lower is better)
Translates to: RLIPVHSHADHP*SGLQISSEFHP
Trigger: GGGGTGGAATTCAGAAGAAATTTGAAGACCAGATCATGGGTGGTCTGCATGTGAATGAACAGGAATGAGCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
3UTR TCA 72 bp TACTTTAAACTACTACTAAAGCACTTGTTCTCCAAATaGCCTGAGAAATCCCCTTGCCTCAGCTCTGGGACA +
Preference number: 3 (lower is better)
Translates to: YFKLLLKHLFSK*PEKSPCLSSGT
Trigger: TGTCCCAGAGCTGAGGCAAGGGGATTTCTCAGGTCATTTGGAGAACAAGTGCTTTAGTAGTAGTTTAAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
3UTR TCA 72 bp AGAAGGGAAGTCAATGGCATACCCAGGATTCCTTCCTaGTCCCTCAAAGAAATGGGGAATAAACACTTTAAA +
Preference number: 3 (lower is better)
Translates to: RREVNGIPRIPS*SLKEMGNKHFK
Trigger: TTTAAAGTGTTTATTCCCCATTTCTTTGAGGGATCAGGAAGGAATCCTGGGTATGCCATTGACTTCCCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
3UTR TCA 72 bp AGCAGCGGTTTTAAATCCTTTTGGCTTCAAGTTCTCTaGAAATTTACTATGCTCTCCACAACAAGAGCTCCC +
Preference number: 3 (lower is better)
Translates to: SSGFKSFWLQVL*KFTMLSTTRAP
Trigger: GGGAGCTCTTGTTGTGGAGAGCATAGTAAATTTTCAGAGAACTTGAAGCCAAAAGGATTTAAAACCGCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR TCA 90 bp GGGAAGTCAATGGCATACCCAGGATTCCTTCCTGATCCCTCAAAGAAATGGGGACCCGCCCTCCGCGCCTaGTTGGCCAGCTCCCCACCC +
Preference number: 4 (lower is better)
Translates to: GKSMAYPGFLPDPSKKWGPALRA*LASSPP
Trigger: GGGTGGGGAGCTGGCCAATCAGGCGCGGAGGGCGGG...TCCCCATTTCTTTGAGGGATCAGGAAGGAATCCTGGGTATGCCATTGACTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621309.4
CDS-3UTR TCA 90 bp CAGAAGAGAGTGGGCCCCAGAGATGGAAGGACCCCAGTGTCATCACCAAACAACGGCAGGAGAATGGCTTaGACCCGGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: QKRVGPRDGRTPVSSPNNGRRMA*TREAEV
Trigger: AACCTCCGCCTCCCGGGTTCAAGCCATTCTCCTGCC...GTTGTTTGGTGATGACACTGGGGTCCTTCCATCTCTGGGGCCCACTCTCTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR TCA 90 bp TGCGACCCCCGCCATTTTTGCTGTCTACTTAGAAGGGAAGTCAATGGCATACCCGGACGGCTGCCACGATaGCCCCCACATTCCGCTCCA +
Preference number: 4 (lower is better)
Translates to: CDPRHFCCLLRREVNGIPGRLPR*PPHSAP
Trigger: TGGAGCGGAATGTGGGGGTCATCGTGGCAGCCGTCC...GGGTATGCCATTGACTTCCCTTCTAAGTAGACAGCAAAAATGGCGGGGGTCGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR TCA 90 bp CAGAAGAGAGTGGGCCCCAGAGATGGAAGGACCCCAGTGTCATCACCAAACAACCAGCCAAGGGAAGGGTaGTGGCCTAAGCCACCAGCT +
Preference number: 4 (lower is better)
Translates to: QKRVGPRDGRTPVSSPNNQPREG*WPKPPA
Trigger: AGCTGGTGGCTTAGGCCATCACCCTTCCCTTGGCTG...GTTGTTTGGTGATGACACTGGGGTCCTTCCATCTCTGGGGCCCACTCTCTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR CCA 90 bp CCCCGCCATTTTTGCTGTCTACTTAGAAGGGAAGTCAATGGCATACCCAGGATTCCCTCCGCGCCTGATTaGCCAGCTCCCCACCCCTGC +
Preference number: 4 (lower is better)
Translates to: PRHFCCLLRREVNGIPRIPSAPD*PAPHPC
Trigger: GCAGGGGTGGGGAGCTGGCCAATCAGGCGCGGAGGG...AATCCTGGGTATGCCATTGACTTCCCTTCTAAGTAGACAGCAAAAATGGCGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000621309.4
CDS-3UTR TCA 90 bp GCTGGCCCTGGTCGTCAGTACACAAGGAAAGAGCCCAGAACCAAGCTCAAGATAAGCCAGGTGGGCAGTTaGGTGCAGATTCCTGCGACC +
Preference number: 4 (lower is better)
Translates to: AGPGRQYTRKEPRTKLKISQVGS*VQIPAT
Trigger: GGTCGCAGGAATCTGCACTCAACTGCCCACCTGGCT...TATCTTGAGCTTGGTTCTGGGCTCTTTCCTTGTGTACTGACGACCAGGGCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR GCA 90 bp GGTGGGCAGTTGAGTGCAGATTCCTGCGACCCCCGCCATTTTTGCTGTCTACTTCCTCCCCATAGCTGTTaGCGCCTTCCTCAGAGACCA +
Preference number: 4 (lower is better)
Translates to: GGQLSADSCDPRHFCCLLPPHSC*RLPQRP
Trigger: TGGTCTCTGAGGAAGGCGGCAACAGCTATGGGGAGG...AAGTAGACAGCAAAAATGGCGGGGGTCGCAGGAATCTGCACTCAACTGCCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR TCA 90 bp CCTGGTCGTCAGTACACAAGGAAAGAGCCCAGAACCAAGCTCAAGATACCTATTGGACGGCTGCCACGATaGCCCCCACATTCCGCTCCA +
Preference number: 4 (lower is better)
Translates to: PGRQYTRKEPRTKLKIPIGRLPR*PPHSAP
Trigger: TGGAGCGGAATGTGGGGGTCATCGTGGCAGCCGTCC...AATAGGTATCTTGAGCTTGGTTCTGGGCTCTTTCCTTGTGTACTGACGACCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR TCA 90 bp TGGGAAGACAGAAGAGAGTGGGCCCCAGAGATGGAAGGACCCCAGTGTCATCACAGGTGGAGGTTGCAGTaGGCCAAGGTTGTACCATTG +
Preference number: 4 (lower is better)
Translates to: WEDRREWAPEMEGPQCHHRWRLQ*AKVVPL
Trigger: CAATGGTACAACCTTGGCTCACTGCAACCTCCACCT...GTGATGACACTGGGGTCCTTCCATCTCTGGGGCCCACTCTCTTCTGTCTTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR CCA 90 bp GGGAAGTCAATGGCATACCCAGGATTCCTTCCTGATCCCTCAAAGAAATGGGGACCGCCGAAGGACTCCTaGGAACAGACACAGCTCCGC +
Preference number: 4 (lower is better)
Translates to: GKSMAYPGFLPDPSKKWGPPKDS*EQTQLR
Trigger: GCGGAGCTGTGTCTGTTCCCAGGAGTCCTTCGGCGG...TCCCCATTTCTTTGAGGGATCAGGAAGGAATCCTGGGTATGCCATTGACTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR CCA 90 bp CATTTTTGCTGTCTACTTAGAAGGGAAGTCAATGGCATACCCAGGATTCCTTCCCCCGCCTCGGCGCACTaGCGCCTTTCCCCACAGGAG +
Preference number: 4 (lower is better)
Translates to: HFCCLLRREVNGIPRIPSPASAH*RLSPQE
Trigger: CTCCTGTGGGGAAAGGCGCCAGTGCGCCGAGGCGGG...GGAAGGAATCCTGGGTATGCCATTGACTTCCCTTCTAAGTAGACAGCAAAAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000621309.4
3UTR CAA 72 bp TACCTATTCAAAGATCCCTGCCAGCCAGGTGGGCAGTaGAGTGCAGATTCCTGCGACCCCCGCCATTTTTGC +
Preference number: 4 (lower is better)
Translates to: YLFKDPCQPGGQ*SADSCDPRHFC
Trigger: GCAAAAATGGCGGGGGTCGCAGGAATCTGCACTCAACTGCCCACCTGGCTGGCAGGGATCTTTGAATAGGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR TCA 90 bp TGCGACCCCCGCCATTTTTGCTGTCTACTTAGAAGGGAAGTCAATGGCATACCCTTGTTGCCAGGCTCCTaGGCAGCTGGGATTACAGGC +
Preference number: 4 (lower is better)
Translates to: CDPRHFCCLLRREVNGIPLLPGS*AAGITG
Trigger: GCCTGTAATCCCAGCTGCTCAGGAGCCTGGCAACAA...GGGTATGCCATTGACTTCCCTTCTAAGTAGACAGCAAAAATGGCGGGGGTCGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR TCA 90 bp AAGACAAATAAGGCATCCTGTGAAACTACAGACATCAGGGGCCAGAGTCCGGTAGGCAGGAGAATGGCTTaGACCCGGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: KTNKASCETTDIRGQSPVGRRMA*TREAEV
Trigger: AACCTCCGCCTCCCGGGTTCAAGCCATTCTCCTGCC...TACCGGACTCTGGCCCCTGATGTCTGTAGTTTCACAGGATGCCTTATTTGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR GCA 90 bp CCTTGCCTCAGCTCTGGGACAGTAGTTCCTACAGCTGTAGGGAGGTCTGTTAATCCTCCCCATAGCTGTTaGCGCCTTCCTCAGAGACCA +
Preference number: 4 (lower is better)
Translates to: PCLSSGTVVPTAVGRSVNPPHSC*RLPQRP
Trigger: TGGTCTCTGAGGAAGGCGGCAACAGCTATGGGGAGG...ATTAACAGACCTCCCTACAGCTGTAGGAACTACTGTCCCAGAGCTGAGGCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR GCA 90 bp TGGGAAGACAGAAGAGAGTGGGCCCCAGAGATGGAAGGACCCCAGTGTCATCACTGTAACACTGCCCAATaGCAGGGAGCACAACAGGAT +
Preference number: 4 (lower is better)
Translates to: WEDRREWAPEMEGPQCHHCNTAQ*QGAQQD
Trigger: ATCCTGTTGTGCTCCCTGGCATTGGGCAGTGTTACA...GTGATGACACTGGGGTCCTTCCATCTCTGGGGCCCACTCTCTTCTGTCTTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR GCA 90 bp GAGTGGGCCCCAGAGATGGAAGGACCCCAGTGTCATCACCAAACAACCATTTCAGGTTACAAGGACGGCTaGCACGATGACCCCCACATT +
Preference number: 4 (lower is better)
Translates to: EWAPEMEGPQCHHQTTISGYKDG*HDDPHI
Trigger: AATGTGGGGGTCATCGTGGCAGCCGTCCTTGTAACC...TGAAATGGTTGTTTGGTGATGACACTGGGGTCCTTCCATCTCTGGGGCCCACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR GCA 90 bp GGTGGGCAGTTGAGTGCAGATTCCTGCGACCCCCGCCATTTTTGCTGTCTACTTTTGAGTGCAGATTCCTaGGACCCCCGCCATTTTTGC +
Preference number: 4 (lower is better)
Translates to: GGQLSADSCDPRHFCCLLLSADS*DPRHFC
Trigger: GCAAAAATGGCGGGGGTCGCAGGAATCTGCACTCAA...AAGTAGACAGCAAAAATGGCGGGGGTCGCAGGAATCTGCACTCAACTGCCCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 24 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR CCA 90 bp CCTTGCCTCAGCTCTGGGACAGTAGTTCCTACAGCTGTAGGGAGGTCTGTTAATGCAGAGGGATCCCAGTaGCACTTCCCATGGGAAGAC +
Preference number: 4 (lower is better)
Translates to: PCLSSGTVVPTAVGRSVNAEGSQ*HFPWED
Trigger: GTCTTCCCATGGGAAGTGCCACTGGGATCCCTCTGC...ATTAACAGACCTCCCTACAGCTGTAGGAACTACTGTCCCAGAGCTGAGGCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR CCA 90 bp TGCGACCCCCGCCATTTTTGCTGTCTACTTAGAAGGGAAGTCAATGGCATACCCACATGGGAGGTGATGTaGCCGGGTGCAGTGACTCAC +
Preference number: 4 (lower is better)
Translates to: CDPRHFCCLLRREVNGIPTWEVM*PGAVTH
Trigger: GTGAGTCACTGCACCCGGCCACATCACCTCCCATGT...GGGTATGCCATTGACTTCCCTTCTAAGTAGACAGCAAAAATGGCGGGGGTCGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR TCA 90 bp GAGTGGGCCCCAGAGATGGAAGGACCCCAGTGTCATCACCAAACAACCATTTCATCCAGTATCAGAGGCTaGCAGGGGATCAAAGACCAG +
Preference number: 4 (lower is better)
Translates to: EWAPEMEGPQCHHQTTISSSIRG*QGIKDQ
Trigger: CTGGTCTTTGATCCCCTGTCAGCCTCTGATACTGGA...TGAAATGGTTGTTTGGTGATGACACTGGGGTCCTTCCATCTCTGGGGCCCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR TCA 90 bp TTAGAAGGGAAGTCAATGGCATACCCAGGATTCCTTCCTGATCCCTCAAAGAAAGGACGGCTGCCACGATaGCCCCCACATTCCGCTCCA +
Preference number: 4 (lower is better)
Translates to: LEGKSMAYPGFLPDPSKKGRLPR*PPHSAP
Trigger: TGGAGCGGAATGTGGGGGTCATCGTGGCAGCCGTCC...TTTCTTTGAGGGATCAGGAAGGAATCCTGGGTATGCCATTGACTTCCCTTCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR TCA 90 bp TGGGAAGACAGAAGAGAGTGGGCCCCAGAGATGGAAGGACCCCAGTGTCATCACATGACGAGGTCTGTTTaGATTCTCCTTCACTTCGGG +
Preference number: 4 (lower is better)
Translates to: WEDRREWAPEMEGPQCHHMTRSV*ILLHFG
Trigger: CCCGAAGTGAAGGAGAATTCAAACAGACCTCGTCAT...GTGATGACACTGGGGTCCTTCCATCTCTGGGGCCCACTCTCTTCTGTCTTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR TCA 90 bp AAGCTGTCCTCAGGCCCCAAGAAACATACTGTCCCCTCATTTAGAAACAGACTAGCAGATGATAGGCGGTaGGCCGACCAGGCTCACACC +
Preference number: 4 (lower is better)
Translates to: KLSSGPKKHTVPSFRNRLADDRR*ADQAHT
Trigger: GGTGTGAGCCTGGTCGGCTCACCGCCTATCATCTGC...TAGTCTGTTTCTAAATGAGGGGACAGTATGTTTCTTGGGGCCTGAGGACAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR TCA 90 bp GAGTGGGCCCCAGAGATGGAAGGACCCCAGTGTCATCACCAAACAACCATTTCAGAGTCCGGTAGCACCTaGGTAAGGCAAATGCAGATG +
Preference number: 4 (lower is better)
Translates to: EWAPEMEGPQCHHQTTISESGST*VRQMQM
Trigger: CATCTGCATTTGCCTTACTCAGGTGCTACCGGACTC...TGAAATGGTTGTTTGGTGATGACACTGGGGTCCTTCCATCTCTGGGGCCCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR TCA 90 bp GCTGGCCCTGGTCGTCAGTACACAAGGAAAGAGCCCAGAACCAAGCTCAAGATAGAGTCCGGTAGCACCTaGGTAAGGCAAATGCAGATG +
Preference number: 4 (lower is better)
Translates to: AGPGRQYTRKEPRTKLKIESGST*VRQMQM
Trigger: CATCTGCATTTGCCTTACTCAGGTGCTACCGGACTC...TATCTTGAGCTTGGTTCTGGGCTCTTTCCTTGTGTACTGACGACCAGGGCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR GCA 90 bp GCTGGCCCTGGTCGTCAGTACACAAGGAAAGAGCCCAGAACCAAGCTCAAGATATTGAGTGCAGATTCCTaGGACCCCCGCCATTTTTGC +
Preference number: 4 (lower is better)
Translates to: AGPGRQYTRKEPRTKLKILSADS*DPRHFC
Trigger: GCAAAAATGGCGGGGGTCGCAGGAATCTGCACTCAA...TATCTTGAGCTTGGTTCTGGGCTCTTTCCTTGTGTACTGACGACCAGGGCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR GCA 90 bp GCTGGCCCTGGTCGTCAGTACACAAGGAAAGAGCCCAGAACCAAGCTCAAGATACCTGAGAAATCCCCTTaGCTCAGCTCTGGGACAGTA +
Preference number: 4 (lower is better)
Translates to: AGPGRQYTRKEPRTKLKIPEKSP*LSSGTV
Trigger: TACTGTCCCAGAGCTGAGGCAAGGGGATTTCTCAGG...TATCTTGAGCTTGGTTCTGGGCTCTTTCCTTGTGTACTGACGACCAGGGCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR CCA 90 bp CCTCAAATTCACAGAGCCATGAATCACCTCTGCTTCCCCATGACCTTTTCCATACCGCCGAAGGACTCCTaGGAACAGACACAGCTCCGC +
Preference number: 4 (lower is better)
Translates to: PQIHRAMNHLCFPMTFSIPPKDS*EQTQLR
Trigger: GCGGAGCTGTGTCTGTTCCCAGGAGTCCTTCGGCGG...TATGGAAAAGGTCATGGGGAAGCAGAGGTGATTCATGGCTCTGTGAATTTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR CCA 90 bp CAGAAGAGAGTGGGCCCCAGAGATGGAAGGACCCCAGTGTCATCACCAAACAACCCAGCTCTCCTGTTGTaGGATTCAGGACATAGGAAG +
Preference number: 4 (lower is better)
Translates to: QKRVGPRDGRTPVSSPNNPALLL*DSGHRK
Trigger: CTTCCTATGTCCTGAATCCCACAACAGGAGAGCTGG...GTTGTTTGGTGATGACACTGGGGTCCTTCCATCTCTGGGGCCCACTCTCTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR CCA 90 bp GGGAAGTCAATGGCATACCCAGGATTCCTTCCTGATCCCTCAAAGAAATGGGGAGCCTGCCTCAGCCTCTaGGATTATAGGCGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: GKSMAYPGFLPDPSKKWGACLSL*DYRREP
Trigger: TGGCTCACGCCTATAATCCCAGAGGCTGAGGCAGGC...TCCCCATTTCTTTGAGGGATCAGGAAGGAATCCTGGGTATGCCATTGACTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR TCA 90 bp AAGCTCAAGATACCTATTCAAAGATCCCTGCCAGCCAGGTGGGCAGTTGAGTGCCATAGGAAGAGTTGCTaGAGGCACGGGTGCTTTTGG +
Preference number: 4 (lower is better)
Translates to: KLKIPIQRSLPARWAVECHRKSC*RHGCFW
Trigger: CCAAAAGCACCCGTGCCTTCAGCAACTCTTCCTATG...GCACTCAACTGCCCACCTGGCTGGCAGGGATCTTTGAATAGGTATCTTGAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR TCA 90 bp ACAACACACACACAAGCTCAACAAAGAGCTAAGACCACTACACACATCTCCACAGCAGATGATAGGCGGTaGGCCGACCAGGCTCACACC +
Preference number: 4 (lower is better)
Translates to: TTHTQAQQRAKTTTHISTADDRR*ADQAHT
Trigger: GGTGTGAGCCTGGTCGGCTCACCGCCTATCATCTGC...TGTGGAGATGTGTGTAGTGGTCTTAGCTCTTTGTTGAGCTTGTGTGTGTGTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR TCA 90 bp AAGCTCAAGATACCTATTCAAAGATCCCTGCCAGCCAGGTGGGCAGTTGAGTGCCCCAGGATTCCTTCCTaGTCCCTCAAAGAAATGGGG +
Preference number: 4 (lower is better)
Translates to: KLKIPIQRSLPARWAVECPRIPS*SLKEMG
Trigger: CCCCATTTCTTTGAGGGATCAGGAAGGAATCCTGGG...GCACTCAACTGCCCACCTGGCTGGCAGGGATCTTTGAATAGGTATCTTGAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR TCA 90 bp CCTCAAATTCACAGAGCCATGAATCACCTCTGCTTCCCCATGACCTTTTCCATAAGCCAGGTGGGCAGTTaGGTGCAGATTCCTGCGACC +
Preference number: 4 (lower is better)
Translates to: PQIHRAMNHLCFPMTFSISQVGS*VQIPAT
Trigger: GGTCGCAGGAATCTGCACTCAACTGCCCACCTGGCT...TATGGAAAAGGTCATGGGGAAGCAGAGGTGATTCATGGCTCTGTGAATTTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR TCA 90 bp CAGAAGAGAGTGGGCCCCAGAGATGGAAGGACCCCAGTGTCATCACCAAACAACAAGAGGGCTCTGGAATaGAGGCCTGAAATTCAGAAG +
Preference number: 4 (lower is better)
Translates to: QKRVGPRDGRTPVSSPNNKRALE*RPEIQK
Trigger: CTTCTGAATTTCAGGCCTTCATTCCAGAGCCCTCTT...GTTGTTTGGTGATGACACTGGGGTCCTTCCATCTCTGGGGCCCACTCTCTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR TCA 90 bp CAGAAGAGAGTGGGCCCCAGAGATGGAAGGACCCCAGTGTCATCACCAAACAACTTGGCATGTGACCCTTaGCTGATGGCTTCATTAGCA +
Preference number: 4 (lower is better)
Translates to: QKRVGPRDGRTPVSSPNNLACDP*LMASLA
Trigger: TGCTAATGAAGCCATCAGTCAAGGGTCACATGCCAA...GTTGTTTGGTGATGACACTGGGGTCCTTCCATCTCTGGGGCCCACTCTCTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR TCA 90 bp CCTTGCCTCAGCTCTGGGACAGTAGTTCCTACAGCTGTAGGGAGGTCTGTTAATAGGCGGAGGTTACAGTaGGCCAAGATCATACCACTG +
Preference number: 4 (lower is better)
Translates to: PCLSSGTVVPTAVGRSVNRRRLQ*AKIIPL
Trigger: CAGTGGTATGATCTTGGCTCACTGTAACCTCCGCCT...ATTAACAGACCTCCCTACAGCTGTAGGAACTACTGTCCCAGAGCTGAGGCAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR TCA 90 bp TGGGAAGACAGAAGAGAGTGGGCCCCAGAGATGGAAGGACCCCAGTGTCATCACTATCCCAGATTATGCTaGGTTCATGTCTCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: WEDRREWAPEMEGPQCHHYPRLC*VHVSGE
Trigger: TTCCCCTGAGACATGAACTCAGCATAATCTGGGATA...GTGATGACACTGGGGTCCTTCCATCTCTGGGGCCCACTCTCTTCTGTCTTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR TCA 90 bp CCTTGCCTCAGCTCTGGGACAGTAGTTCCTACAGCTGTAGGGAGGTCTGTTAATAGGTGGAGGTTGCAGTaGGCCAAGGTTGTACCATTG +
Preference number: 4 (lower is better)
Translates to: PCLSSGTVVPTAVGRSVNRWRLQ*AKVVPL
Trigger: CAATGGTACAACCTTGGCTCACTGCAACCTCCACCT...ATTAACAGACCTCCCTACAGCTGTAGGAACTACTGTCCCAGAGCTGAGGCAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR GCA 90 bp AGAAGACAAATAAGGCATCCTGTGAAACTACAGACATCAGGGGCCAGAGTCCGGAGTTTCCTCTCGACTTaGGCCTTTGTCCCCATCGCG +
Preference number: 4 (lower is better)
Translates to: RRQIRHPVKLQTSGARVRSFLST*AFVPIA
Trigger: CGCGATGGGGACAAAGGCGCAAGTCGAGAGGAAACT...CCGGACTCTGGCCCCTGATGTCTGTAGTTTCACAGGATGCCTTATTTGTCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR GCA 90 bp GCTGGCCCTGGTCGTCAGTACACAAGGAAAGAGCCCAGAACCAAGCTCAAGATATGTAACACTGCCCAATaGCAGGGAGCACAACAGGAT +
Preference number: 4 (lower is better)
Translates to: AGPGRQYTRKEPRTKLKICNTAQ*QGAQQD
Trigger: ATCCTGTTGTGCTCCCTGGCATTGGGCAGTGTTACA...TATCTTGAGCTTGGTTCTGGGCTCTTTCCTTGTGTACTGACGACCAGGGCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR GCA 90 bp TGTAGAAGACAAATAAGGCATCCTGTGAAACTACAGACATCAGGGGCCAGAGTCAGGTGGGCAGTTGAGTaGAGATTCCTGCGACCCCCG +
Preference number: 4 (lower is better)
Translates to: CRRQIRHPVKLQTSGARVRWAVE*RFLRPP
Trigger: CGGGGGTCGCAGGAATCTGCACTCAACTGCCCACCT...GACTCTGGCCCCTGATGTCTGTAGTTTCACAGGATGCCTTATTTGTCTTCTACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR GCA 90 bp CCTTGCCTCAGCTCTGGGACAGTAGTTCCTACAGCTGTAGGGAGGTCTGTTAATCCTGAGAAATCCCCTTaGCTCAGCTCTGGGACAGTA +
Preference number: 4 (lower is better)
Translates to: PCLSSGTVVPTAVGRSVNPEKSP*LSSGTV
Trigger: TACTGTCCCAGAGCTGAGGCAAGGGGATTTCTCAGG...ATTAACAGACCTCCCTACAGCTGTAGGAACTACTGTCCCAGAGCTGAGGCAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR CCA 90 bp AGAAGACAAATAAGGCATCCTGTGAAACTACAGACATCAGGGGCCAGAGTCCGGAGGCTCCTGAGCAGCTaGGATTACAGGCATGCACCA +
Preference number: 4 (lower is better)
Translates to: RRQIRHPVKLQTSGARVRRLLSS*DYRHAP
Trigger: TGGTGCATGCCTGTAATCCCAGCTGCTCAGGAGCCT...CCGGACTCTGGCCCCTGATGTCTGTAGTTTCACAGGATGCCTTATTTGTCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR CCA 90 bp TGTACAAAGGAGCCTAGGAACCCTCAAAGACCTTTTCCCCTACTTACTTCCCACCAGCAAAGGAAGGCCTaGCCACAAGAGGGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: CTKEPRNPQRPFPLLTSHQQRKA*PQEGSG
Trigger: TCCAGAGCCCTCTTGTGGCCAGGCCTTCCTTTGCTG...GTGGGAAGTAAGTAGGGGAAAAGGTCTTTGAGGGTTCCTAGGCTCCTTTGTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR CCA 90 bp AAGACAAATAAGGCATCCTGTGAAACTACAGACATCAGGGGCCAGAGTCCGGTACAGCAAAGGAAGGCCTaGCCACAAGAGGGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: KTNKASCETTDIRGQSPVQQRKA*PQEGSG
Trigger: TCCAGAGCCCTCTTGTGGCCAGGCCTTCCTTTGCTG...TACCGGACTCTGGCCCCTGATGTCTGTAGTTTCACAGGATGCCTTATTTGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR CCA 90 bp AAGCTCAAGATACCTATTCAAAGATCCCTGCCAGCCAGGTGGGCAGTTGAGTGCCCTTCTCTCACTTGGTaGAACAGGCCAAGGAGATCC +
Preference number: 4 (lower is better)
Translates to: KLKIPIQRSLPARWAVECPSLTW*NRPRRS
Trigger: GGATCTCCTTGGCCTGTTCCACCAAGTGAGAGAAGG...GCACTCAACTGCCCACCTGGCTGGCAGGGATCTTTGAATAGGTATCTTGAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR CCA 90 bp GGGAAGTCAATGGCATACCCAGGATTCCTTCCTGATCCCTCAAAGAAATGGGGACCCTTGCCTCAGCTCTaGGACAGTAGTTCCTACAGC +
Preference number: 4 (lower is better)
Translates to: GKSMAYPGFLPDPSKKWGPLPQL*DSSSYS
Trigger: GCTGTAGGAACTACTGTCCCAGAGCTGAGGCAAGGG...TCCCCATTTCTTTGAGGGATCAGGAAGGAATCCTGGGTATGCCATTGACTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR CCA 90 bp CCCCGCCATTTTTGCTGTCTACTTAGAAGGGAAGTCAATGGCATACCCAGGATTACATGGGAGGTGATGTaGCCGGGTGCAGTGACTCAC +
Preference number: 4 (lower is better)
Translates to: PRHFCCLLRREVNGIPRITWEVM*PGAVTH
Trigger: GTGAGTCACTGCACCCGGCCACATCACCTCCCATGT...AATCCTGGGTATGCCATTGACTTCCCTTCTAAGTAGACAGCAAAAATGGCGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR TCA 90 bp GCTGGCCCTGGTCGTCAGTACACAAGGAAAGAGCCCAGAACCAAGCTCAAGATAACAGGATCGCCAATATaGAGAGGCACAACAGTTTCC +
Preference number: 4 (lower is better)
Translates to: AGPGRQYTRKEPRTKLKITGSPI*RGTTVS
Trigger: GGAAACTGTTGTGCCTCTTCATATTGGCGATCCTGT...TATCTTGAGCTTGGTTCTGGGCTCTTTCCTTGTGTACTGACGACCAGGGCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR TCA 90 bp AGAAGACAAATAAGGCATCCTGTGAAACTACAGACATCAGGGGCCAGAGTCCGGTCCAGTATCAGAGGCTaGCAGGGGATCAAAGACCAG +
Preference number: 4 (lower is better)
Translates to: RRQIRHPVKLQTSGARVRSSIRG*QGIKDQ
Trigger: CTGGTCTTTGATCCCCTGTCAGCCTCTGATACTGGA...CCGGACTCTGGCCCCTGATGTCTGTAGTTTCACAGGATGCCTTATTTGTCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR TCA 90 bp TGCGACCCCCGCCATTTTTGCTGTCTACTTAGAAGGGAAGTCAATGGCATACCCGGCTCACACCAGGAATaGCGAGGTCTGTTTGAATTC +
Preference number: 4 (lower is better)
Translates to: CDPRHFCCLLRREVNGIPGSHQE*RGLFEF
Trigger: GAATTCAAACAGACCTCGTCATTCCTGGTGTGAGCC...GGGTATGCCATTGACTTCCCTTCTAAGTAGACAGCAAAAATGGCGGGGGTCGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR TCA 90 bp TGCGACCCCCGCCATTTTTGCTGTCTACTTAGAAGGGAAGTCAATGGCATACCCTCAGAAGCTCTGCCTTaGGATAAGAACCAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: CDPRHFCCLLRREVNGIPSEALP*DKNQEG
Trigger: CCCTTCCTGGTTCTTATCTCAAGGCAGAGCTTCTGA...GGGTATGCCATTGACTTCCCTTCTAAGTAGACAGCAAAAATGGCGGGGGTCGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR TCA 90 bp GAGTGGGCCCCAGAGATGGAAGGACCCCAGTGTCATCACCAAACAACCATTTCAGTTAATGCACCTGGCTaGACAGGAGGTACAAGAGTA +
Preference number: 4 (lower is better)
Translates to: EWAPEMEGPQCHHQTTISVNAPG*TGGTRV
Trigger: TACTCTTGTACCTCCTGTTCAGCCAGGTGCATTAAC...TGAAATGGTTGTTTGGTGATGACACTGGGGTCCTTCCATCTCTGGGGCCCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR TCA 90 bp CAGAAGAGAGTGGGCCCCAGAGATGGAAGGACCCCAGTGTCATCACCAAACAACCATGCAGACCACCCATaGTCTGGTCTTCAAATTTCT +
Preference number: 4 (lower is better)
Translates to: QKRVGPRDGRTPVSSPNNHADHP*SGLQIS
Trigger: AGAAATTTGAAGACCAGATCATGGGTGGTCTGCATG...GTTGTTTGGTGATGACACTGGGGTCCTTCCATCTCTGGGGCCCACTCTCTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR TCA 90 bp CCTCAAATTCACAGAGCCATGAATCACCTCTGCTTCCCCATGACCTTTTCCATAGAGGTGGGCGGATCATaGGGTCAAGGGATCGAGATC +
Preference number: 4 (lower is better)
Translates to: PQIHRAMNHLCFPMTFSIEVGGS*GQGIEI
Trigger: GATCTCGATCCCTTGACCTCATGATCCGCCCACCTC...TATGGAAAAGGTCATGGGGAAGCAGAGGTGATTCATGGCTCTGTGAATTTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR GCA 90 bp CCCCGCCATTTTTGCTGTCTACTTAGAAGGGAAGTCAATGGCATACCCAGGATTAGTTTCCTCTCGACTTaGGCCTTTGTCCCCATCGCG +
Preference number: 4 (lower is better)
Translates to: PRHFCCLLRREVNGIPRISFLST*AFVPIA
Trigger: CGCGATGGGGACAAAGGCGCAAGTCGAGAGGAAACT...AATCCTGGGTATGCCATTGACTTCCCTTCTAAGTAGACAGCAAAAATGGCGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR GCA 90 bp GCTGGCCCTGGTCGTCAGTACACAAGGAAAGAGCCCAGAACCAAGCTCAAGATAGACCCCCGCCATTTTTaGTGTCTACTTAGAAGGGAA +
Preference number: 4 (lower is better)
Translates to: AGPGRQYTRKEPRTKLKIDPRHF*CLLRRE
Trigger: TTCCCTTCTAAGTAGACAGCAAAAATGGCGGGGGTC...TATCTTGAGCTTGGTTCTGGGCTCTTTCCTTGTGTACTGACGACCAGGGCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR GCA 90 bp CATTTTTGCTGTCTACTTAGAAGGGAAGTCAATGGCATACCCAGGATTCCTTCCAGGTGGGCAGTTGAGTaGAGATTCCTGCGACCCCCG +
Preference number: 4 (lower is better)
Translates to: HFCCLLRREVNGIPRIPSRWAVE*RFLRPP
Trigger: CGGGGGTCGCAGGAATCTGCACTCAACTGCCCACCT...GGAAGGAATCCTGGGTATGCCATTGACTTCCCTTCTAAGTAGACAGCAAAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR CCA 90 bp AAGCTCAAGATACCTATTCAAAGATCCCTGCCAGCCAGGTGGGCAGTTGAGTGCCCAGCTCTCCTGTTGTaGGATTCAGGACATAGGAAG +
Preference number: 4 (lower is better)
Translates to: KLKIPIQRSLPARWAVECPALLL*DSGHRK
Trigger: CTTCCTATGTCCTGAATCCCACAACAGGAGAGCTGG...GCACTCAACTGCCCACCTGGCTGGCAGGGATCTTTGAATAGGTATCTTGAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR CCA 90 bp CCTCAAATTCACAGAGCCATGAATCACCTCTGCTTCCCCATGACCTTTTCCATAGCAGAGGGATCCCAGTaGCACTTCCCATGGGAAGAC +
Preference number: 4 (lower is better)
Translates to: PQIHRAMNHLCFPMTFSIAEGSQ*HFPWED
Trigger: GTCTTCCCATGGGAAGTGCCACTGGGATCCCTCTGC...TATGGAAAAGGTCATGGGGAAGCAGAGGTGATTCATGGCTCTGTGAATTTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR CCA 90 bp CCTCAAATTCACAGAGCCATGAATCACCTCTGCTTCCCCATGACCTTTTCCATACATTGCACTCCAGCCTaGCAACGGAGCAAGACTCCC +
Preference number: 4 (lower is better)
Translates to: PQIHRAMNHLCFPMTFSIHCTPA*QRSKTP
Trigger: GGGAGTCTTGCTCCGTTGCCAGGCTGGAGTGCAATG...TATGGAAAAGGTCATGGGGAAGCAGAGGTGATTCATGGCTCTGTGAATTTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR CCA 90 bp TGTAGAAGACAAATAAGGCATCCTGTGAAACTACAGACATCAGGGGCCAGAGTCCATTGCACTCCAGCCTaGCAACGGAGCAAGACTCCC +
Preference number: 4 (lower is better)
Translates to: CRRQIRHPVKLQTSGARVHCTPA*QRSKTP
Trigger: GGGAGTCTTGCTCCGTTGCCAGGCTGGAGTGCAATG...GACTCTGGCCCCTGATGTCTGTAGTTTCACAGGATGCCTTATTTGTCTTCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR CCA 90 bp AAGACAAATAAGGCATCCTGTGAAACTACAGACATCAGGGGCCAGAGTCCGGTACCTGCACGTTCCGATTaGTGTAAGGAACCGCTGCTC +
Preference number: 4 (lower is better)
Translates to: KTNKASCETTDIRGQSPVPARSD*CKEPLL
Trigger: GAGCAGCGGTTCCTTACACCAATCGGAACGTGCAGG...TACCGGACTCTGGCCCCTGATGTCTGTAGTTTCACAGGATGCCTTATTTGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621309.4
CDS-3UTR TCA 90 bp CCTGGTCGTCAGTACACAAGGAAAGAGCCCAGAACCAAGCTCAAGATACCTATTCATAGGAAGAGTTGCTaGAGGCACGGGTGCTTTTGG +
Preference number: 4 (lower is better)
Translates to: PGRQYTRKEPRTKLKIPIHRKSC*RHGCFW
Trigger: CCAAAAGCACCCGTGCCTTCAGCAACTCTTCCTATG...AATAGGTATCTTGAGCTTGGTTCTGGGCTCTTTCCTTGTGTACTGACGACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR TCA 90 bp TGGGAAGACAGAAGAGAGTGGGCCCCAGAGATGGAAGGACCCCAGTGTCATCACTGGCTTCAAGTTCTCTaGAAATTTACTATGCTCTCC +
Preference number: 4 (lower is better)
Translates to: WEDRREWAPEMEGPQCHHWLQVL*KFTMLS
Trigger: GGAGAGCATAGTAAATTTTCAGAGAACTTGAAGCCA...GTGATGACACTGGGGTCCTTCCATCTCTGGGGCCCACTCTCTTCTGTCTTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR TCA 90 bp ACAACACACACACAAGCTCAACAAAGAGCTAAGACCACTACACACATCTCCACATTGTTGCCAGGCTCCTaGGCAGCTGGGATTACAGGC +
Preference number: 4 (lower is better)
Translates to: TTHTQAQQRAKTTTHISTLLPGS*AAGITG
Trigger: GCCTGTAATCCCAGCTGCTCAGGAGCCTGGCAACAA...TGTGGAGATGTGTGTAGTGGTCTTAGCTCTTTGTTGAGCTTGTGTGTGTGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR TCA 90 bp TGCGACCCCCGCCATTTTTGCTGTCTACTTAGAAGGGAAGTCAATGGCATACCCTCTGGAATGAAGGCCTaGAATTCAGAAGCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: CDPRHFCCLLRREVNGIPSGMKA*NSEALP
Trigger: AGGCAGAGCTTCTGAATTTCAGGCCTTCATTCCAGA...GGGTATGCCATTGACTTCCCTTCTAAGTAGACAGCAAAAATGGCGGGGGTCGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR TCA 90 bp AAGCTCAAGATACCTATTCAAAGATCCCTGCCAGCCAGGTGGGCAGTTGAGTGCTCTGGAATGAAGGCCTaGAATTCAGAAGCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: KLKIPIQRSLPARWAVECSGMKA*NSEALP
Trigger: AGGCAGAGCTTCTGAATTTCAGGCCTTCATTCCAGA...GCACTCAACTGCCCACCTGGCTGGCAGGGATCTTTGAATAGGTATCTTGAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR TCA 90 bp TGCGACCCCCGCCATTTTTGCTGTCTACTTAGAAGGGAAGTCAATGGCATACCCAAATTCACAGAGCCATaGATCACCTCTGCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: CDPRHFCCLLRREVNGIPKFTEP*ITSASP
Trigger: TGGGGAAGCAGAGGTGATTCATGGCTCTGTGAATTT...GGGTATGCCATTGACTTCCCTTCTAAGTAGACAGCAAAAATGGCGGGGGTCGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR TCA 90 bp CATTTTTGCTGTCTACTTAGAAGGGAAGTCAATGGCATACCCAGGATTCCTTCCGAGGTGGGCGGATCATaGGGTCAAGGGATCGAGATC +
Preference number: 4 (lower is better)
Translates to: HFCCLLRREVNGIPRIPSEVGGS*GQGIEI
Trigger: GATCTCGATCCCTTGACCTCATGATCCGCCCACCTC...GGAAGGAATCCTGGGTATGCCATTGACTTCCCTTCTAAGTAGACAGCAAAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR TCA 90 bp CCCCGCCATTTTTGCTGTCTACTTAGAAGGGAAGTCAATGGCATACCCAGGATTCCCCTCCCCTGTCCTTaGTCTGTAGATCCTGTTAAG +
Preference number: 4 (lower is better)
Translates to: PRHFCCLLRREVNGIPRIPLPCP*SVDPVK
Trigger: CTTAACAGGATCTACAGATCAAGGACAGGGGAGGGG...AATCCTGGGTATGCCATTGACTTCCCTTCTAAGTAGACAGCAAAAATGGCGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR GCA 90 bp GGGAAGTCAATGGCATACCCAGGATTCCTTCCTGATCCCTCAAAGAAATGGGGATGTAACACTGCCCAATaGCAGGGAGCACAACAGGAT +
Preference number: 4 (lower is better)
Translates to: GKSMAYPGFLPDPSKKWGCNTAQ*QGAQQD
Trigger: ATCCTGTTGTGCTCCCTGGCATTGGGCAGTGTTACA...TCCCCATTTCTTTGAGGGATCAGGAAGGAATCCTGGGTATGCCATTGACTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR GCA 90 bp TGCGACCCCCGCCATTTTTGCTGTCTACTTAGAAGGGAAGTCAATGGCATACCCTTTGAGCTGGAGTTTTaGTCTTGTTGCCAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: CDPRHFCCLLRREVNGIPFELEF*SCCQAP
Trigger: AGGAGCCTGGCAACAAGAGCAAAACTCCAGCTCAAA...GGGTATGCCATTGACTTCCCTTCTAAGTAGACAGCAAAAATGGCGGGGGTCGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR CCA 90 bp CCTGGTCGTCAGTACACAAGGAAAGAGCCCAGAACCAAGCTCAAGATACCTATTGAAGGTGATACCAGTTaGCAAGAAGGTCACCCGGTC +
Preference number: 4 (lower is better)
Translates to: PGRQYTRKEPRTKLKIPIEGDTS*QEGHPV
Trigger: GACCGGGTGACCTTCTTGCCAACTGGTATCACCTTC...AATAGGTATCTTGAGCTTGGTTCTGGGCTCTTTCCTTGTGTACTGACGACCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR TCA 90 bp AGAAGACAAATAAGGCATCCTGTGAAACTACAGACATCAGGGGCCAGAGTCCGGACAGGATCGCCAATATaGAGAGGCACAACAGTTTCC +
Preference number: 4 (lower is better)
Translates to: RRQIRHPVKLQTSGARVRTGSPI*RGTTVS
Trigger: GGAAACTGTTGTGCCTCTTCATATTGGCGATCCTGT...CCGGACTCTGGCCCCTGATGTCTGTAGTTTCACAGGATGCCTTATTTGTCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR TCA 90 bp TTAGAAGGGAAGTCAATGGCATACCCAGGATTCCTTCCTGATCCCTCAAAGAAAGGAACCATCTTGTTCTaGGCATGTCAGCACTGCCCG +
Preference number: 4 (lower is better)
Translates to: LEGKSMAYPGFLPDPSKKGTILF*ACQHCP
Trigger: CGGGCAGTGCTGACATGCTCAGAACAAGATGGTTCC...TTTCTTTGAGGGATCAGGAAGGAATCCTGGGTATGCCATTGACTTCCCTTCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR TCA 90 bp AGAAGACAAATAAGGCATCCTGTGAAACTACAGACATCAGGGGCCAGAGTCCGGATGACGAGGTCTGTTTaGATTCTCCTTCACTTCGGG +
Preference number: 4 (lower is better)
Translates to: RRQIRHPVKLQTSGARVRMTRSV*ILLHFG
Trigger: CCCGAAGTGAAGGAGAATTCAAACAGACCTCGTCAT...CCGGACTCTGGCCCCTGATGTCTGTAGTTTCACAGGATGCCTTATTTGTCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR TCA 90 bp CCTGGTCGTCAGTACACAAGGAAAGAGCCCAGAACCAAGCTCAAGATACCTATTGGCTCACACCAGGAATaGCGAGGTCTGTTTGAATTC +
Preference number: 4 (lower is better)
Translates to: PGRQYTRKEPRTKLKIPIGSHQE*RGLFEF
Trigger: GAATTCAAACAGACCTCGTCATTCCTGGTGTGAGCC...AATAGGTATCTTGAGCTTGGTTCTGGGCTCTTTCCTTGTGTACTGACGACCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR TCA 90 bp GGATTCCTTCCTGATCCCTCAAAGAAATGGGGAATAAACACTTTAAACAAGTTCGCAGATGATAGGCGGTaGGCCGACCAGGCTCACACC +
Preference number: 4 (lower is better)
Translates to: GFLPDPSKKWGINTLNKFADDRR*ADQAHT
Trigger: GGTGTGAGCCTGGTCGGCTCACCGCCTATCATCTGC...GAACTTGTTTAAAGTGTTTATTCCCCATTTCTTTGAGGGATCAGGAAGGAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR TCA 90 bp AAGCTGTCCTCAGGCCCCAAGAAACATACTGTCCCCTCATTTAGAAACAGACTAGAGTCCGGTAGCACCTaGGTAAGGCAAATGCAGATG +
Preference number: 4 (lower is better)
Translates to: KLSSGPKKHTVPSFRNRLESGST*VRQMQM
Trigger: CATCTGCATTTGCCTTACTCAGGTGCTACCGGACTC...TAGTCTGTTTCTAAATGAGGGGACAGTATGTTTCTTGGGGCCTGAGGACAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR TCA 90 bp AAGCTGTCCTCAGGCCCCAAGAAACATACTGTCCCCTCATTTAGAAACAGACTACCCAGGATTCCTTCCTaGTCCCTCAAAGAAATGGGG +
Preference number: 4 (lower is better)
Translates to: KLSSGPKKHTVPSFRNRLPRIPS*SLKEMG
Trigger: CCCCATTTCTTTGAGGGATCAGGAAGGAATCCTGGG...TAGTCTGTTTCTAAATGAGGGGACAGTATGTTTCTTGGGGCCTGAGGACAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR TCA 90 bp CCAGGATTCCTTCCTGATCCCTCAAAGAAATGGGGAATAAACACTTTAAACAAGCAGCCAAGGGAAGGGTaGTGGCCTAAGCCACCAGCT +
Preference number: 4 (lower is better)
Translates to: PGFLPDPSKKWGINTLNKQPREG*WPKPPA
Trigger: AGCTGGTGGCTTAGGCCATCACCCTTCCCTTGGCTG...CTTGTTTAAAGTGTTTATTCCCCATTTCTTTGAGGGATCAGGAAGGAATCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR TCA 90 bp GGGAAGTCAATGGCATACCCAGGATTCCTTCCTGATCCCTCAAAGAAATGGGGAGTTAATGCACCTGGCTaGACAGGAGGTACAAGAGTA +
Preference number: 4 (lower is better)
Translates to: GKSMAYPGFLPDPSKKWGVNAPG*TGGTRV
Trigger: TACTCTTGTACCTCCTGTTCAGCCAGGTGCATTAAC...TCCCCATTTCTTTGAGGGATCAGGAAGGAATCCTGGGTATGCCATTGACTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR TCA 90 bp CCTGGTCGTCAGTACACAAGGAAAGAGCCCAGAACCAAGCTCAAGATACCTATTGTTCTCCAAATGACCTaGGAAATCCCCTTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: PGRQYTRKEPRTKLKIPIVLQMT*EIPLPQ
Trigger: CTGAGGCAAGGGGATTTCTCAGGTCATTTGGAGAAC...AATAGGTATCTTGAGCTTGGTTCTGGGCTCTTTCCTTGTGTACTGACGACCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR TCA 90 bp TGCGACCCCCGCCATTTTTGCTGTCTACTTAGAAGGGAAGTCAATGGCATACCCTTGTTTATTGGCATGTaGCCCTTGACTGATGGCTTC +
Preference number: 4 (lower is better)
Translates to: CDPRHFCCLLRREVNGIPLFIGM*PLTDGF
Trigger: GAAGCCATCAGTCAAGGGTCACATGCCAATAAACAA...GGGTATGCCATTGACTTCCCTTCTAAGTAGACAGCAAAAATGGCGGGGGTCGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR TCA 90 bp TGTACAAAGGAGCCTAGGAACCCTCAAAGACCTTTTCCCCTACTTACTTCCCACGCCCGACCAACATGGTaGAACCCTGTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: CTKEPRNPQRPFPLLTSHARPTW*NPVSTK
Trigger: TTTAGTAGAGACAGGGTTTCACCATGTTGGTCGGGC...GTGGGAAGTAAGTAGGGGAAAAGGTCTTTGAGGGTTCCTAGGCTCCTTTGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR GCA 90 bp GCCATTTTTGCTGTCTACTTAGAAGGGAAGTCAATGGCATACCCAGGATTCCTTAGTTTCCTCTCGACTTaGGCCTTTGTCCCCATCGCG +
Preference number: 4 (lower is better)
Translates to: AIFAVYLEGKSMAYPGFLSFLST*AFVPIA
Trigger: CGCGATGGGGACAAAGGCGCAAGTCGAGAGGAAACT...AAGGAATCCTGGGTATGCCATTGACTTCCCTTCTAAGTAGACAGCAAAAATGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR GCA 90 bp CCTTGCCTCAGCTCTGGGACAGTAGTTCCTACAGCTGTAGGGAGGTCTGTTAATTCAGGTTCAGAAGAGTaGACTGTAACACTGCCCAAT +
Preference number: 4 (lower is better)
Translates to: PCLSSGTVVPTAVGRSVNSGSEE*TVTLPN
Trigger: ATTGGGCAGTGTTACAGTGCACTCTTCTGAACCTGA...ATTAACAGACCTCCCTACAGCTGTAGGAACTACTGTCCCAGAGCTGAGGCAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR GCA 90 bp GATTATGCTGAGTTCATGTCTCAGGGGAAACACCAAAATCCATGGAACTGCTCTGGTTACAAGGACGGCTaGCACGATGACCCCCACATT +
Preference number: 4 (lower is better)
Translates to: DYAEFMSQGKHQNPWNCSGYKDG*HDDPHI
Trigger: AATGTGGGGGTCATCGTGGCAGCCGTCCTTGTAACC...AGAGCAGTTCCATGGATTTTGGTGTTTCCCCTGAGACATGAACTCAGCATAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR GCA 90 bp GGTGGGCAGTTGAGTGCAGATTCCTGCGACCCCCGCCATTTTTGCTGTCTACTTTATAGGCAAACCAGATaGCAAAAACCAAGATTCCCA +
Preference number: 4 (lower is better)
Translates to: GGQLSADSCDPRHFCCLLYRQTR*QKPRFP
Trigger: TGGGAATCTTGGTTTTTGGCATCTGGTTTGCCTATA...AAGTAGACAGCAAAAATGGCGGGGGTCGCAGGAATCTGCACTCAACTGCCCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR GCA 90 bp CCAGGATTCCTTCCTGATCCCTCAAAGAAATGGGGAATAAACACTTTAAACAAGAGGTGGGCAGTTGAGTaGAGATTCCTGCGACCCCCG +
Preference number: 4 (lower is better)
Translates to: PGFLPDPSKKWGINTLNKRWAVE*RFLRPP
Trigger: CGGGGGTCGCAGGAATCTGCACTCAACTGCCCACCT...CTTGTTTAAAGTGTTTATTCCCCATTTCTTTGAGGGATCAGGAAGGAATCCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR GCA 90 bp CCTGGTCGTCAGTACACAAGGAAAGAGCCCAGAACCAAGCTCAAGATACCTATTGCCATGAATCACCTCTaGTTCCCCATGACCTTTTCC +
Preference number: 4 (lower is better)
Translates to: PGRQYTRKEPRTKLKIPIAMNHL*FPMTFS
Trigger: GGAAAAGGTCATGGGGAAGCAGAGGTGATTCATGGC...AATAGGTATCTTGAGCTTGGTTCTGGGCTCTTTCCTTGTGTACTGACGACCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR GCA 90 bp GCCATTTTTGCTGTCTACTTAGAAGGGAAGTCAATGGCATACCCAGGATTCCTTCCAGGAGGTGGAGGTTaGAGTGAGCCAAGGTTGTAC +
Preference number: 4 (lower is better)
Translates to: AIFAVYLEGKSMAYPGFLPGGGG*SEPRLY
Trigger: GTACAACCTTGGCTCACTGCAACCTCCACCTCCTGG...AAGGAATCCTGGGTATGCCATTGACTTCCCTTCTAAGTAGACAGCAAAAATGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR CCA 90 bp CCTCAAATTCACAGAGCCATGAATCACCTCTGCTTCCCCATGACCTTTTCCATAGAAGGTGATACCAGTTaGCAAGAAGGTCACCCGGTC +
Preference number: 4 (lower is better)
Translates to: PQIHRAMNHLCFPMTFSIEGDTS*QEGHPV
Trigger: GACCGGGTGACCTTCTTGCCAACTGGTATCACCTTC...TATGGAAAAGGTCATGGGGAAGCAGAGGTGATTCATGGCTCTGTGAATTTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR CCA 90 bp CCTGGTCGTCAGTACACAAGGAAAGAGCCCAGAACCAAGCTCAAGATACCTATTCCAGCTCTCCTGTTGTaGGATTCAGGACATAGGAAG +
Preference number: 4 (lower is better)
Translates to: PGRQYTRKEPRTKLKIPIPALLL*DSGHRK
Trigger: CTTCCTATGTCCTGAATCCCACAACAGGAGAGCTGG...AATAGGTATCTTGAGCTTGGTTCTGGGCTCTTTCCTTGTGTACTGACGACCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR TCA 90 bp AAGCTCAAGATACCTATTCAAAGATCCCTGCCAGCCAGGTGGGCAGTTGAGTGCTCACTATCCCATCTTTaGACCAGGTGTATTCAGAAG +
Preference number: 4 (lower is better)
Translates to: KLKIPIQRSLPARWAVECSLSHL*TRCIQK
Trigger: CTTCTGAATACACCTGGTTCAAAGATGGGATAGTGA...GCACTCAACTGCCCACCTGGCTGGCAGGGATCTTTGAATAGGTATCTTGAGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR TCA 90 bp GGTCGTCAGTACACAAGGAAAGAGCCCAGAACCAAGCTCAAGATACCTATTCAAGTTCTCCAAATGACCTaGGAAATCCCCTTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: GRQYTRKEPRTKLKIPIQVLQMT*EIPLPQ
Trigger: CTGAGGCAAGGGGATTTCTCAGGTCATTTGGAGAAC...TTGAATAGGTATCTTGAGCTTGGTTCTGGGCTCTTTCCTTGTGTACTGACGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR TCA 90 bp TGTACAAAGGAGCCTAGGAACCCTCAAAGACCTTTTCCCCTACTTACTTCCCACCACTTGTTCTCCAAATaGCCTGAGAAATCCCCTTGC +
Preference number: 4 (lower is better)
Translates to: CTKEPRNPQRPFPLLTSHHLFSK*PEKSPC
Trigger: GCAAGGGGATTTCTCAGGTCATTTGGAGAACAAGTG...GTGGGAAGTAAGTAGGGGAAAAGGTCTTTGAGGGTTCCTAGGCTCCTTTGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR TCA 90 bp GGGAAGTCAATGGCATACCCAGGATTCCTTCCTGATCCCTCAAAGAAATGGGGACATGCAGACCACCCATaGTCTGGTCTTCAAATTTCT +
Preference number: 4 (lower is better)
Translates to: GKSMAYPGFLPDPSKKWGHADHP*SGLQIS
Trigger: AGAAATTTGAAGACCAGATCATGGGTGGTCTGCATG...TCCCCATTTCTTTGAGGGATCAGGAAGGAATCCTGGGTATGCCATTGACTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR TCA 90 bp CCCCGCCATTTTTGCTGTCTACTTAGAAGGGAAGTCAATGGCATACCCAGGATTTTGGCATGTGACCCTTaGCTGATGGCTTCATTAGCA +
Preference number: 4 (lower is better)
Translates to: PRHFCCLLRREVNGIPRILACDP*LMASLA
Trigger: TGCTAATGAAGCCATCAGTCAAGGGTCACATGCCAA...AATCCTGGGTATGCCATTGACTTCCCTTCTAAGTAGACAGCAAAAATGGCGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR TCA 90 bp ACAACACACACACAAGCTCAACAAAGAGCTAAGACCACTACACACATCTCCACAAGGCGGAGGTTACAGTaGGCCAAGATCATACCACTG +
Preference number: 4 (lower is better)
Translates to: TTHTQAQQRAKTTTHISTRRRLQ*AKIIPL
Trigger: CAGTGGTATGATCTTGGCTCACTGTAACCTCCGCCT...TGTGGAGATGTGTGTAGTGGTCTTAGCTCTTTGTTGAGCTTGTGTGTGTGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR TCA 90 bp TGCGACCCCCGCCATTTTTGCTGTCTACTTAGAAGGGAAGTCAATGGCATACCCTCTGTCTTCCAACCATaGCACAGAACTGAAACATAC +
Preference number: 4 (lower is better)
Translates to: CDPRHFCCLLRREVNGIPSVFQP*HRTETY
Trigger: GTATGTTTCAGTTCTGTGTCATGGTTGGAAGACAGA...GGGTATGCCATTGACTTCCCTTCTAAGTAGACAGCAAAAATGGCGGGGGTCGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR TCA 90 bp CCTTGCCTCAGCTCTGGGACAGTAGTTCCTACAGCTGTAGGGAGGTCTGTTAATTCTGTCTTCCAACCATaGCACAGAACTGAAACATAC +
Preference number: 4 (lower is better)
Translates to: PCLSSGTVVPTAVGRSVNSVFQP*HRTETY
Trigger: GTATGTTTCAGTTCTGTGTCATGGTTGGAAGACAGA...ATTAACAGACCTCCCTACAGCTGTAGGAACTACTGTCCCAGAGCTGAGGCAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR GCA 90 bp CCTGGTCGTCAGTACACAAGGAAAGAGCCCAGAACCAAGCTCAAGATACCTATTTCCTGTTCATTCACATaGAGACCACCCATGATCTGG +
Preference number: 4 (lower is better)
Translates to: PGRQYTRKEPRTKLKIPISCSFT*RPPMIW
Trigger: CCAGATCATGGGTGGTCTGCATGTGAATGAACAGGA...AATAGGTATCTTGAGCTTGGTTCTGGGCTCTTTCCTTGTGTACTGACGACCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR GCA 90 bp TGTACAAAGGAGCCTAGGAACCCTCAAAGACCTTTTCCCCTACTTACTTCCCACTCCTGTTCATTCACATaGAGACCACCCATGATCTGG +
Preference number: 4 (lower is better)
Translates to: CTKEPRNPQRPFPLLTSHSCSFT*RPPMIW
Trigger: CCAGATCATGGGTGGTCTGCATGTGAATGAACAGGA...GTGGGAAGTAAGTAGGGGAAAAGGTCTTTGAGGGTTCCTAGGCTCCTTTGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR GCA 90 bp GGTCGTCAGTACACAAGGAAAGAGCCCAGAACCAAGCTCAAGATACCTATTCAAGCCATGAATCACCTCTaGTTCCCCATGACCTTTTCC +
Preference number: 4 (lower is better)
Translates to: GRQYTRKEPRTKLKIPIQAMNHL*FPMTFS
Trigger: GGAAAAGGTCATGGGGAAGCAGAGGTGATTCATGGC...TTGAATAGGTATCTTGAGCTTGGTTCTGGGCTCTTTCCTTGTGTACTGACGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR GCA 90 bp GCCATTTTTGCTGTCTACTTAGAAGGGAAGTCAATGGCATACCCAGGATTCCTTGGTGTAAGGAACCGCTaGTCTTCAGAACGAGTCACC +
Preference number: 4 (lower is better)
Translates to: AIFAVYLEGKSMAYPGFLGVRNR*SSERVT
Trigger: GGTGACTCGTTCTGAAGAGCAGCGGTTCCTTACACC...AAGGAATCCTGGGTATGCCATTGACTTCCCTTCTAAGTAGACAGCAAAAATGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621309.4
CDS-3UTR CCA 90 bp AAGCTGTCCTCAGGCCCCAAGAAACATACTGTCCCCTCATTTAGAAACAGACTACTGGTGGTGTCTCCTTaGTCAAACTTCCACTCCACA +
Preference number: 4 (lower is better)
Translates to: KLSSGPKKHTVPSFRNRLLVVSP*SNFHST
Trigger: TGTGGAGTGGAAGTTTGACCAAGGAGACACCACCAG...TAGTCTGTTTCTAAATGAGGGGACAGTATGTTTCTTGGGGCCTGAGGACAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368026.11
CDS-3UTR CCA 90 bp GGTCGTCAGTACACAAGGAAAGAGCCCAGAACCAAGCTCAAGATACCTATTCAACTGGTGGTGTCTCCTTaGTCAAACTTCCACTCCACA +
Preference number: 4 (lower is better)
Translates to: GRQYTRKEPRTKLKIPIQLVVSP*SNFHST
Trigger: TGTGGAGTGGAAGTTTGACCAAGGAGACACCACCAG...TTGAATAGGTATCTTGAGCTTGGTTCTGGGCTCTTTCCTTGTGTACTGACGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000537746.1
CDS-3UTR CCA 90 bp CCTCAAATTCACAGAGCCATGAATCACCTCTGCTTCCCCATGACCTTTTCCATAAACTGTAGGCTTGGATaGAGGCACAAGCACGATGAG +
Preference number: 4 (lower is better)
Translates to: PQIHRAMNHLCFPMTFSINCRLG*RHKHDE
Trigger: CTCATCGTGCTTGTGCCTCCATCCAAGCCTACAGTT...TATGGAAAAGGTCATGGGGAAGCAGAGGTGATTCATGGCTCTGTGAATTTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR CCA 90 bp CCCCGCCATTTTTGCTGTCTACTTAGAAGGGAAGTCAATGGCATACCCAGGATTCAGCATTTGAAGTCATaGGTGTCCCATACCCATTCC +
Preference number: 4 (lower is better)
Translates to: PRHFCCLLRREVNGIPRIQHLKS*VSHTHS
Trigger: GGAATGGGTATGGGACACCCATGACTTCAAATGCTG...AATCCTGGGTATGCCATTGACTTCCCTTCTAAGTAGACAGCAAAAATGGCGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR CCA 90 bp CAATTTCAGCATACAGCTAAGACTACACAACACACACACAAGCTCAACAAAGAGGCCTGCCTCAGCCTCTaGGATTATAGGCGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: QFQHTAKTTQHTHKLNKEACLSL*DYRREP
Trigger: TGGCTCACGCCTATAATCCCAGAGGCTGAGGCAGGC...CTCTTTGTTGAGCTTGTGTGTGTGTTGTGTAGTCTTAGCTGTATGCTGAAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR CCA 90 bp TACTTTATTAAGCTGTCCTCAGGCCCCAAGAAACATACTGTCCCCTCATTTAGAAGGCTCCTGAGCAGCTaGGATTACAGGCATGCACCA +
Preference number: 4 (lower is better)
Translates to: YFIKLSSGPKKHTVPSFRRLLSS*DYRHAP
Trigger: TGGTGCATGCCTGTAATCCCAGCTGCTCAGGAGCCT...TCTAAATGAGGGGACAGTATGTTTCTTGGGGCCTGAGGACAGCTTAATAAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR CCA 90 bp CATTTTTGCTGTCTACTTAGAAGGGAAGTCAATGGCATACCCAGGATTCCTTCCCCTTCTCTCACTTGGTaGAACAGGCCAAGGAGATCC +
Preference number: 4 (lower is better)
Translates to: HFCCLLRREVNGIPRIPSPSLTW*NRPRRS
Trigger: GGATCTCCTTGGCCTGTTCCACCAAGTGAGAGAAGG...GGAAGGAATCCTGGGTATGCCATTGACTTCCCTTCTAAGTAGACAGCAAAAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR CCA 90 bp TACTTTATTAAGCTGTCCTCAGGCCCCAAGAAACATACTGTCCCCTCATTTAGACCCTTGCCTCAGCTCTaGGACAGTAGTTCCTACAGC +
Preference number: 4 (lower is better)
Translates to: YFIKLSSGPKKHTVPSFRPLPQL*DSSSYS
Trigger: GCTGTAGGAACTACTGTCCCAGAGCTGAGGCAAGGG...TCTAAATGAGGGGACAGTATGTTTCTTGGGGCCTGAGGACAGCTTAATAAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR CCA 90 bp GGGAAGTCAATGGCATACCCAGGATTCCTTCCTGATCCCTCAAAGAAATGGGGAAACTGTAGGCTTGGATaGAGGCACTGTGATCTTGTT +
Preference number: 4 (lower is better)
Translates to: GKSMAYPGFLPDPSKKWGNCRLG*RHCDLV
Trigger: AACAAGATCACAGTGCCTCCATCCAAGCCTACAGTT...TCCCCATTTCTTTGAGGGATCAGGAAGGAATCCTGGGTATGCCATTGACTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537746.1
CDS-3UTR TCA 90 bp GATTATGCTGAGTTCATGTCTCAGGGGAAACACCAAAATCCATGGAACTGCTCTCATGCGCACAGCATTTaGAGTCATGGGTGTCCCATA +
Preference number: 4 (lower is better)
Translates to: DYAEFMSQGKHQNPWNCSHAHSI*SHGCPI
Trigger: TATGGGACACCCATGACTTCAAATGCTGTGCGCATG...AGAGCAGTTCCATGGATTTTGGTGTTTCCCCTGAGACATGAACTCAGCATAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR TCA 90 bp TTAGAAGGGAAGTCAATGGCATACCCAGGATTCCTTCCTGATCCCTCAAAGAAACATGCGCACAGCATTTaGAGTCATGGGTGTCCCATA +
Preference number: 4 (lower is better)
Translates to: LEGKSMAYPGFLPDPSKKHAHSI*SHGCPI
Trigger: TATGGGACACCCATGACTTCAAATGCTGTGCGCATG...TTTCTTTGAGGGATCAGGAAGGAATCCTGGGTATGCCATTGACTTCCCTTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR TCA 90 bp AAGACAAATAAGGCATCCTGTGAAACTACAGACATCAGGGGCCAGAGTCCGGTATTGTTTATTGGCATGTaGCCCTTGACTGATGGCTTC +
Preference number: 4 (lower is better)
Translates to: KTNKASCETTDIRGQSPVLFIGM*PLTDGF
Trigger: GAAGCCATCAGTCAAGGGTCACATGCCAATAAACAA...TACCGGACTCTGGCCCCTGATGTCTGTAGTTTCACAGGATGCCTTATTTGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR TCA 90 bp CATTTTTGCTGTCTACTTAGAAGGGAAGTCAATGGCATACCCAGGATTCCTTCCGCCCGACCAACATGGTaGAACCCTGTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: HFCCLLRREVNGIPRIPSARPTW*NPVSTK
Trigger: TTTAGTAGAGACAGGGTTTCACCATGTTGGTCGGGC...GGAAGGAATCCTGGGTATGCCATTGACTTCCCTTCTAAGTAGACAGCAAAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR GCA 90 bp CCAGGATTCCTTCCTGATCCCTCAAAGAAATGGGGAATAAACACTTTAAACAAGGGTTACAAGGACGGCTaGCACGATGACCCCCACATT +
Preference number: 4 (lower is better)
Translates to: PGFLPDPSKKWGINTLNKGYKDG*HDDPHI
Trigger: AATGTGGGGGTCATCGTGGCAGCCGTCCTTGTAACC...CTTGTTTAAAGTGTTTATTCCCCATTTCTTTGAGGGATCAGGAAGGAATCCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR GCA 90 bp GAGTGGGCCCCAGAGATGGAAGGACCCCAGTGTCATCACCAAACAACCATTTCATCTGAAAATTTACTATaGTCTCCACAACAAGAGCTC +
Preference number: 4 (lower is better)
Translates to: EWAPEMEGPQCHHQTTISSENLL*SPQQEL
Trigger: GAGCTCTTGTTGTGGAGAGCATAGTAAATTTTCAGA...TGAAATGGTTGTTTGGTGATGACACTGGGGTCCTTCCATCTCTGGGGCCCACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR CCA 90 bp ACAACACACACACAAGCTCAACAAAGAGCTAAGACCACTACACACATCTCCACAGTACCTTCTCTCACTTaGTGGAACAGGCCAAGGAGA +
Preference number: 4 (lower is better)
Translates to: TTHTQAQQRAKTTTHISTVPSLT*WNRPRR
Trigger: TCTCCTTGGCCTGTTCCACCAAGTGAGAGAAGGTAC...TGTGGAGATGTGTGTAGTGGTCTTAGCTCTTTGTTGAGCTTGTGTGTGTGTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR TCA 90 bp CCTTGCCTCAGCTCTGGGACAGTAGTTCCTACAGCTGTAGGGAGGTCTGTTAATCCTCATAGGAAGCTGTaGTCTTGTTATTATAGCAAA +
Preference number: 4 (lower is better)
Translates to: PCLSSGTVVPTAVGRSVNPHRKL*SCYYSK
Trigger: TTTGCTATAATAACAAGATCACAGCTTCCTATGAGG...ATTAACAGACCTCCCTACAGCTGTAGGAACTACTGTCCCAGAGCTGAGGCAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368026.11
CDS-3UTR TCA 90 bp CCTGGTCGTCAGTACACAAGGAAAGAGCCCAGAACCAAGCTCAAGATACCTATTTCACTATCCCATCTTTaGACCAGGTGTATTCAGAAG +
Preference number: 4 (lower is better)
Translates to: PGRQYTRKEPRTKLKIPISLSHL*TRCIQK
Trigger: CTTCTGAATACACCTGGTTCAAAGATGGGATAGTGA...AATAGGTATCTTGAGCTTGGTTCTGGGCTCTTTCCTTGTGTACTGACGACCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR TCA 90 bp CAATTTCAGCATACAGCTAAGACTACACAACACACACACAAGCTCAACAAAGAGCATAGGAAGAGTTGCTaGAGGCACGGGTGCTTTTGG +
Preference number: 4 (lower is better)
Translates to: QFQHTAKTTQHTHKLNKEHRKSC*RHGCFW
Trigger: CCAAAAGCACCCGTGCCTTCAGCAACTCTTCCTATG...CTCTTTGTTGAGCTTGTGTGTGTGTTGTGTAGTCTTAGCTGTATGCTGAAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR TCA 90 bp GATTATGCTGAGTTCATGTCTCAGGGGAAACACCAAAATCCATGGAACTGCTCTAAGAGGGCTCTGGAATaGAGGCCTGAAATTCAGAAG +
Preference number: 4 (lower is better)
Translates to: DYAEFMSQGKHQNPWNCSKRALE*RPEIQK
Trigger: CTTCTGAATTTCAGGCCTTCATTCCAGAGCCCTCTT...AGAGCAGTTCCATGGATTTTGGTGTTTCCCCTGAGACATGAACTCAGCATAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR TCA 90 bp CATTTTTGCTGTCTACTTAGAAGGGAAGTCAATGGCATACCCAGGATTCCTTCCCACTTGTTCTCCAAATaGCCTGAGAAATCCCCTTGC +
Preference number: 4 (lower is better)
Translates to: HFCCLLRREVNGIPRIPSHLFSK*PEKSPC
Trigger: GCAAGGGGATTTCTCAGGTCATTTGGAGAACAAGTG...GGAAGGAATCCTGGGTATGCCATTGACTTCCCTTCTAAGTAGACAGCAAAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR TCA 90 bp CCTCAAATTCACAGAGCCATGAATCACCTCTGCTTCCCCATGACCTTTTCCATATATCCCAGATTATGCTaGGTTCATGTCTCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: PQIHRAMNHLCFPMTFSIYPRLC*VHVSGE
Trigger: TTCCCCTGAGACATGAACTCAGCATAATCTGGGATA...TATGGAAAAGGTCATGGGGAAGCAGAGGTGATTCATGGCTCTGTGAATTTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR GCA 90 bp TTAGAAGGGAAGTCAATGGCATACCCAGGATTCCTTCCTGATCCCTCAAAGAAAGACCCCCGCCATTTTTaGTGTCTACTTAGAAGGGAA +
Preference number: 4 (lower is better)
Translates to: LEGKSMAYPGFLPDPSKKDPRHF*CLLRRE
Trigger: TTCCCTTCTAAGTAGACAGCAAAAATGGCGGGGGTC...TTTCTTTGAGGGATCAGGAAGGAATCCTGGGTATGCCATTGACTTCCCTTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR GCA 90 bp CCAGGATTCCTTCCTGATCCCTCAAAGAAATGGGGAATAAACACTTTAAACAAGTTGAGTGCAGATTCCTaGGACCCCCGCCATTTTTGC +
Preference number: 4 (lower is better)
Translates to: PGFLPDPSKKWGINTLNKLSADS*DPRHFC
Trigger: GCAAAAATGGCGGGGGTCGCAGGAATCTGCACTCAA...CTTGTTTAAAGTGTTTATTCCCCATTTCTTTGAGGGATCAGGAAGGAATCCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR GCA 90 bp AAGCTCAAGATACCTATTCAAAGATCCCTGCCAGCCAGGTGGGCAGTTGAGTGCTCTGAAAATTTACTATaGTCTCCACAACAAGAGCTC +
Preference number: 4 (lower is better)
Translates to: KLKIPIQRSLPARWAVECSENLL*SPQQEL
Trigger: GAGCTCTTGTTGTGGAGAGCATAGTAAATTTTCAGA...GCACTCAACTGCCCACCTGGCTGGCAGGGATCTTTGAATAGGTATCTTGAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR GCA 90 bp GGATTCCTTCCTGATCCCTCAAAGAAATGGGGAATAAACACTTTAAACAAGTTCCCAGGAGGTGGAGGTTaGAGTGAGCCAAGGTTGTAC +
Preference number: 4 (lower is better)
Translates to: GFLPDPSKKWGINTLNKFPGGGG*SEPRLY
Trigger: GTACAACCTTGGCTCACTGCAACCTCCACCTCCTGG...GAACTTGTTTAAAGTGTTTATTCCCCATTTCTTTGAGGGATCAGGAAGGAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR CCA 90 bp GCCATTTTTGCTGTCTACTTAGAAGGGAAGTCAATGGCATACCCAGGATTCCTTAGCAAACGAGTCTGGTaGTGTCTCCTTGGTCAAACT +
Preference number: 4 (lower is better)
Translates to: AIFAVYLEGKSMAYPGFLSKRVW*CLLGQT
Trigger: AGTTTGACCAAGGAGACACCACCAGACTCGTTTGCT...AAGGAATCCTGGGTATGCCATTGACTTCCCTTCTAAGTAGACAGCAAAAATGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000537746.1
CDS-3UTR CCA 90 bp CATTTTTGCTGTCTACTTAGAAGGGAAGTCAATGGCATACCCAGGATTCCTTCCCAGCATTTGAAGTCATaGGTGTCCCATACCCATTCC +
Preference number: 4 (lower is better)
Translates to: HFCCLLRREVNGIPRIPSQHLKS*VSHTHS
Trigger: GGAATGGGTATGGGACACCCATGACTTCAAATGCTG...GGAAGGAATCCTGGGTATGCCATTGACTTCCCTTCTAAGTAGACAGCAAAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR CCA 90 bp GAGTGGGCCCCAGAGATGGAAGGACCCCAGTGTCATCACCAAACAACCATTTCAGATCCCTCAAAGAAATaGGGAATAAACACTTTAAAC +
Preference number: 4 (lower is better)
Translates to: EWAPEMEGPQCHHQTTISDPSKK*GINTLN
Trigger: GTTTAAAGTGTTTATTCCCCATTTCTTTGAGGGATC...TGAAATGGTTGTTTGGTGATGACACTGGGGTCCTTCCATCTCTGGGGCCCACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR TCA 90 bp TACTTTATTAAGCTGTCCTCAGGCCCCAAGAAACATACTGTCCCCTCATTTAGAACAGGATCGCCAATATaGAGAGGCACAACAGTTTCC +
Preference number: 4 (lower is better)
Translates to: YFIKLSSGPKKHTVPSFRTGSPI*RGTTVS
Trigger: GGAAACTGTTGTGCCTCTTCATATTGGCGATCCTGT...TCTAAATGAGGGGACAGTATGTTTCTTGGGGCCTGAGGACAGCTTAATAAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR TCA 90 bp AAGCTGTCCTCAGGCCCCAAGAAACATACTGTCCCCTCATTTAGAAACAGACTATCACTATCCCATCTTTaGACCAGGTGTATTCAGAAG +
Preference number: 4 (lower is better)
Translates to: KLSSGPKKHTVPSFRNRLSLSHL*TRCIQK
Trigger: CTTCTGAATACACCTGGTTCAAAGATGGGATAGTGA...TAGTCTGTTTCTAAATGAGGGGACAGTATGTTTCTTGGGGCCTGAGGACAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR TCA 90 bp GGATTCCTTCCTGATCCCTCAAAGAAATGGGGAATAAACACTTTAAACAAGTTCTCCAGTATCAGAGGCTaGCAGGGGATCAAAGACCAG +
Preference number: 4 (lower is better)
Translates to: GFLPDPSKKWGINTLNKFSSIRG*QGIKDQ
Trigger: CTGGTCTTTGATCCCCTGTCAGCCTCTGATACTGGA...GAACTTGTTTAAAGTGTTTATTCCCCATTTCTTTGAGGGATCAGGAAGGAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR TCA 90 bp CCAGGATTCCTTCCTGATCCCTCAAAGAAATGGGGAATAAACACTTTAAACAAGGGCTCACACCAGGAATaGCGAGGTCTGTTTGAATTC +
Preference number: 4 (lower is better)
Translates to: PGFLPDPSKKWGINTLNKGSHQE*RGLFEF
Trigger: GAATTCAAACAGACCTCGTCATTCCTGGTGTGAGCC...CTTGTTTAAAGTGTTTATTCCCCATTTCTTTGAGGGATCAGGAAGGAATCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR TCA 90 bp CAATTTCAGCATACAGCTAAGACTACACAACACACACACAAGCTCAACAAAGAGTCAGAAGCTCTGCCTTaGGATAAGAACCAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: QFQHTAKTTQHTHKLNKESEALP*DKNQEG
Trigger: CCCTTCCTGGTTCTTATCTCAAGGCAGAGCTTCTGA...CTCTTTGTTGAGCTTGTGTGTGTGTTGTGTAGTCTTAGCTGTATGCTGAAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR TCA 90 bp TGTACAAAGGAGCCTAGGAACCCTCAAAGACCTTTTCCCCTACTTACTTCCCACAAGGCTGGCAATAACTaGCTCATATTCTTCACAAGT +
Preference number: 4 (lower is better)
Translates to: CTKEPRNPQRPFPLLTSHKAGNN*LIFFTS
Trigger: ACTTGTGAAGAATATGAGTCAGTTATTGCCAGCCTT...GTGGGAAGTAAGTAGGGGAAAAGGTCTTTGAGGGTTCCTAGGCTCCTTTGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR TCA 90 bp AGAAGACAAATAAGGCATCCTGTGAAACTACAGACATCAGGGGCCAGAGTCCGGCTATCAGGAATATTTTaGATGTCCAATCACTCTAGG +
Preference number: 4 (lower is better)
Translates to: RRQIRHPVKLQTSGARVRLSGIF*MSNHSR
Trigger: CCTAGAGTGATTGGACATTCAAAATATTCCTGATAG...CCGGACTCTGGCCCCTGATGTCTGTAGTTTCACAGGATGCCTTATTTGTCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR GCA 90 bp TACTTTATTAAGCTGTCCTCAGGCCCCAAGAAACATACTGTCCCCTCATTTAGATTTGAGCTGGAGTTTTaGTCTTGTTGCCAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: YFIKLSSGPKKHTVPSFRFELEF*SCCQAP
Trigger: AGGAGCCTGGCAACAAGAGCAAAACTCCAGCTCAAA...TCTAAATGAGGGGACAGTATGTTTCTTGGGGCCTGAGGACAGCTTAATAAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR CCA 90 bp GATTATGCTGAGTTCATGTCTCAGGGGAAACACCAAAATCCATGGAACTGCTCTTATAGCAAACGAGTCTaGTGGTGTCTCCTTGGTCAA +
Preference number: 4 (lower is better)
Translates to: DYAEFMSQGKHQNPWNCSYSKRV*WCLLGQ
Trigger: TTGACCAAGGAGACACCACCAGACTCGTTTGCTATA...AGAGCAGTTCCATGGATTTTGGTGTTTCCCCTGAGACATGAACTCAGCATAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368026.11
CDS-3UTR CCA 90 bp CCAGGATTCCTTCCTGATCCCTCAAAGAAATGGGGAATAAACACTTTAAACAAGAACTGTAGGCTTGGATaGAGGCACAAGCACGATGAG +
Preference number: 4 (lower is better)
Translates to: PGFLPDPSKKWGINTLNKNCRLG*RHKHDE
Trigger: CTCATCGTGCTTGTGCCTCCATCCAAGCCTACAGTT...CTTGTTTAAAGTGTTTATTCCCCATTTCTTTGAGGGATCAGGAAGGAATCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR CCA 90 bp AAGCTCAAGATACCTATTCAAAGATCCCTGCCAGCCAGGTGGGCAGTTGAGTGCGATCCCTCAAAGAAATaGGGAATAAACACTTTAAAC +
Preference number: 4 (lower is better)
Translates to: KLKIPIQRSLPARWAVECDPSKK*GINTLN
Trigger: GTTTAAAGTGTTTATTCCCCATTTCTTTGAGGGATC...GCACTCAACTGCCCACCTGGCTGGCAGGGATCTTTGAATAGGTATCTTGAGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR CCA 90 bp CCAGGATTCCTTCCTGATCCCTCAAAGAAATGGGGAATAAACACTTTAAACAAGGTACCTTCTCTCACTTaGTGGAACAGGCCAAGGAGA +
Preference number: 4 (lower is better)
Translates to: PGFLPDPSKKWGINTLNKVPSLT*WNRPRR
Trigger: TCTCCTTGGCCTGTTCCACCAAGTGAGAGAAGGTAC...CTTGTTTAAAGTGTTTATTCCCCATTTCTTTGAGGGATCAGGAAGGAATCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR TCA 90 bp CCAGGATTCCTTCCTGATCCCTCAAAGAAATGGGGAATAAACACTTTAAACAAGAAATTCACAGAGCCATaGATCACCTCTGCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: PGFLPDPSKKWGINTLNKKFTEP*ITSASP
Trigger: TGGGGAAGCAGAGGTGATTCATGGCTCTGTGAATTT...CTTGTTTAAAGTGTTTATTCCCCATTTCTTTGAGGGATCAGGAAGGAATCCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR TCA 90 bp CCCCGCCATTTTTGCTGTCTACTTAGAAGGGAAGTCAATGGCATACCCAGGATTCTATCAGGAATATTTTaGATGTCCAATCACTCTAGG +
Preference number: 4 (lower is better)
Translates to: PRHFCCLLRREVNGIPRILSGIF*MSNHSR
Trigger: CCTAGAGTGATTGGACATTCAAAATATTCCTGATAG...AATCCTGGGTATGCCATTGACTTCCCTTCTAAGTAGACAGCAAAAATGGCGGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR GCA 90 bp AAGCTGTCCTCAGGCCCCAAGAAACATACTGTCCCCTCATTTAGAAACAGACTATATAGGCAAACCAGATaGCAAAAACCAAGATTCCCA +
Preference number: 4 (lower is better)
Translates to: KLSSGPKKHTVPSFRNRLYRQTR*QKPRFP
Trigger: TGGGAATCTTGGTTTTTGGCATCTGGTTTGCCTATA...TAGTCTGTTTCTAAATGAGGGGACAGTATGTTTCTTGGGGCCTGAGGACAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR GCA 90 bp GGTCGTCAGTACACAAGGAAAGAGCCCAGAACCAAGCTCAAGATACCTATTCAATATAGGCAAACCAGATaGCAAAAACCAAGATTCCCA +
Preference number: 4 (lower is better)
Translates to: GRQYTRKEPRTKLKIPIQYRQTR*QKPRFP
Trigger: TGGGAATCTTGGTTTTTGGCATCTGGTTTGCCTATA...TTGAATAGGTATCTTGAGCTTGGTTCTGGGCTCTTTCCTTGTGTACTGACGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR TCA 90 bp GGATTCCTTCCTGATCCCTCAAAGAAATGGGGAATAAACACTTTAAACAAGTTCATGACGAGGTCTGTTTaGATTCTCCTTCACTTCGGG +
Preference number: 4 (lower is better)
Translates to: GFLPDPSKKWGINTLNKFMTRSV*ILLHFG
Trigger: CCCGAAGTGAAGGAGAATTCAAACAGACCTCGTCAT...GAACTTGTTTAAAGTGTTTATTCCCCATTTCTTTGAGGGATCAGGAAGGAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR TCA 90 bp GATTATGCTGAGTTCATGTCTCAGGGGAAACACCAAAATCCATGGAACTGCTCTAAGGCTGGCAATAACTaGCTCATATTCTTCACAAGT +
Preference number: 4 (lower is better)
Translates to: DYAEFMSQGKHQNPWNCSKAGNN*LIFFTS
Trigger: ACTTGTGAAGAATATGAGTCAGTTATTGCCAGCCTT...AGAGCAGTTCCATGGATTTTGGTGTTTCCCCTGAGACATGAACTCAGCATAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR GCA 90 bp GGATTCCTTCCTGATCCCTCAAAGAAATGGGGAATAAACACTTTAAACAAGTTCGACCCCCGCCATTTTTaGTGTCTACTTAGAAGGGAA +
Preference number: 4 (lower is better)
Translates to: GFLPDPSKKWGINTLNKFDPRHF*CLLRRE
Trigger: TTCCCTTCTAAGTAGACAGCAAAAATGGCGGGGGTC...GAACTTGTTTAAAGTGTTTATTCCCCATTTCTTTGAGGGATCAGGAAGGAATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR CCA 90 bp GGATTCCTTCCTGATCCCTCAAAGAAATGGGGAATAAACACTTTAAACAAGTTCCAGCATTTGAAGTCATaGGTGTCCCATACCCATTCC +
Preference number: 4 (lower is better)
Translates to: GFLPDPSKKWGINTLNKFQHLKS*VSHTHS
Trigger: GGAATGGGTATGGGACACCCATGACTTCAAATGCTG...GAACTTGTTTAAAGTGTTTATTCCCCATTTCTTTGAGGGATCAGGAAGGAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR CCA 90 bp TGTACAAAGGAGCCTAGGAACCCTCAAAGACCTTTTCCCCTACTTACTTCCCACGATCCCTCAAAGAAATaGGGAATAAACACTTTAAAC +
Preference number: 4 (lower is better)
Translates to: CTKEPRNPQRPFPLLTSHDPSKK*GINTLN
Trigger: GTTTAAAGTGTTTATTCCCCATTTCTTTGAGGGATC...GTGGGAAGTAAGTAGGGGAAAAGGTCTTTGAGGGTTCCTAGGCTCCTTTGTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR GCA 90 bp GGATTCCTTCCTGATCCCTCAAAGAAATGGGGAATAAACACTTTAAACAAGTTCTCAGGTTCAGAAGAGTaGACTGTAACACTGCCCAAT +
Preference number: 4 (lower is better)
Translates to: GFLPDPSKKWGINTLNKFSGSEE*TVTLPN
Trigger: ATTGGGCAGTGTTACAGTGCACTCTTCTGAACCTGA...GAACTTGTTTAAAGTGTTTATTCCCCATTTCTTTGAGGGATCAGGAAGGAATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR CCA 90 bp GGATTCCTTCCTGATCCCTCAAAGAAATGGGGAATAAACACTTTAAACAAGTTCTATAGCAAACGAGTCTaGTGGTGTCTCCTTGGTCAA +
Preference number: 4 (lower is better)
Translates to: GFLPDPSKKWGINTLNKFYSKRV*WCLLGQ
Trigger: TTGACCAAGGAGACACCACCAGACTCGTTTGCTATA...GAACTTGTTTAAAGTGTTTATTCCCCATTTCTTTGAGGGATCAGGAAGGAATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000537746.1
CDS-3UTR TCA 90 bp GGATTCCTTCCTGATCCCTCAAAGAAATGGGGAATAAACACTTTAAACAAGTTCTGGATGGAGGCACTGTaGTCTTGTTATTATAGCAAA +
Preference number: 4 (lower is better)
Translates to: GFLPDPSKKWGINTLNKFWMEAL*SCYYSK
Trigger: TTTGCTATAATAACAAGATCACAGTGCCTCCATCCA...GAACTTGTTTAAAGTGTTTATTCCCCATTTCTTTGAGGGATCAGGAAGGAATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537746.1
CDS CCA 90 bp CCCATCGCGATCAGGCTCCCGACACAACAGCCGCCGAAGGACTCCTaGGAACAGACACAGCTCCGCGACTACAGCGAGGGGACTGAGAGC +
Preference number: 5 (lower is better)
Translates to: PIAIRLPTQQPPKDS*EQTQLRDYSEGTES
Trigger: GCTCTCAGTCCCCTCGCTGTAGTCGCGGAGCTGTGTCTGTTCCCAGGAGTCCTTCGGCGGCTGTTGTGTCGGGAGCCTGATCGCGATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602966.1
ENST00000621309.4
CDS CCA 90 bp CCTCCGCGCCTGATTGGCCAGCTCCCCACCCCTGCACGTTCCGATTaGTGTAAGGAACCGCTGCTCTTCAGAACGAGTCACCTCGGCCAG +
Preference number: 5 (lower is better)
Translates to: PPRLIGQLPTPARSD*CKEPLLFRTSHLGQ
Trigger: CTGGCCGAGGTGACTCGTTCTGAAGAGCAGCGGTTCCTTACACCAATCGGAACGTGCAGGGGTGGGGAGCTGGCCAATCAGGCGCGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621309.4
CDS-3UTR CAA 90 bp GGTGGGCAGTTGAGTGCAGATTCCTGCGACCCCCGCCATTTTTGCTGTCTACTTAGGCAGGAGAATGGCTaGAACCCGGGAGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: GGQLSADSCDPRHFCCLLRQENG*NPGGGG
Trigger: ACCTCCGCCTCCCGGGTTCAAGCCATTCTCCTGCCT...AAGTAGACAGCAAAAATGGCGGGGGTCGCAGGAATCTGCACTCAACTGCCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS TCA 90 bp CCAAGATTCCCAGGAGAATCAGGGTTACAAGGACGGCTGCCACGATaGCCCCCACATTCCGCTCCACAGCTTCCATGCGCACAGCATTTG +
Preference number: 5 (lower is better)
Translates to: PRFPGESGLQGRLPR*PPHSAPQLPCAQHL
Trigger: CAAATGCTGTGCGCATGGAAGCTGTGGAGCGGAATGTGGGGGTCATCGTGGCAGCCGTCCTTGTAACCCTGATTCTCCTGGGAATCTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS GCA 90 bp GCCAAAAACCAAGATTCCCAGGAGAATCAGGGTTACAAGGACGGCTaGCACGATGACCCCCACATTCCGCTCCACAGCTTCCATGCGCAC +
Preference number: 5 (lower is better)
Translates to: AKNQDSQENQGYKDG*HDDPHIPLHSFHAH
Trigger: GTGCGCATGGAAGCTGTGGAGCGGAATGTGGGGGTCATCGTGGCAGCCGTCCTTGTAACCCTGATTCTCCTGGGAATCTTGGTTTTTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS GCA 90 bp AACAGGATCGCCAATATGAAGAGGCACAACAGTTTCCTCTCGACTTaGGCCTTTGTCCCCATCGCGATCAGGCTCCCGACACAACAGCCG +
Preference number: 5 (lower is better)
Translates to: NRIANMKRHNSFLST*AFVPIAIRLPTQQP
Trigger: CGGCTGTTGTGTCGGGAGCCTGATCGCGATGGGGACAAAGGCGCAAGTCGAGAGGAAACTGTTGTGCCTCTTCATATTGGCGATCCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335772.3
ENST00000368026.11
ENST00000602966.1
ENST00000621309.4
CDS CCA 90 bp TGTCCCAGTGTCTTCCCGTGTCACGGACTTGAAGGTGATACCAGTTaGCAAGAAGGTCACCCGGTCCTCATAGGAAGGAGTACGGGGAGA +
Preference number: 5 (lower is better)
Translates to: CPSVFPCHGLEGDTS*QEGHPVLIGRSTGR
Trigger: TCTCCCCGTACTCCTTCCTATGAGGACCGGGTGACCTTCTTGCCAACTGGTATCACCTTCAAGTCCGTGACACGGGAAGACACTGGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621309.4
CDS-3UTR CAA 90 bp GCTGGCCCTGGTCGTCAGTACACAAGGAAAGAGCCCAGAACCAAGCTCAAGATACAGTTTCCTCTCGACTaGCGCCTTTGTCCCCATCGC +
Preference number: 5 (lower is better)
Translates to: AGPGRQYTRKEPRTKLKIQFPLD*RLCPHR
Trigger: GCGATGGGGACAAAGGCGCAAGTCGAGAGGAAACTG...TATCTTGAGCTTGGTTCTGGGCTCTTTCCTTGTGTACTGACGACCAGGGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR CAA 90 bp GGTGGGCAGTTGAGTGCAGATTCCTGCGACCCCCGCCATTTTTGCTGTCTACTTTCCCGTGTCACGGACTaGAAGGTGATACCAGTTGGC +
Preference number: 5 (lower is better)
Translates to: GGQLSADSCDPRHFCCLLSRVTD*KVIPVG
Trigger: GCCAACTGGTATCACCTTCAAGTCCGTGACACGGGA...AAGTAGACAGCAAAAATGGCGGGGGTCGCAGGAATCTGCACTCAACTGCCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR CAA 90 bp AAGCTCAAGATACCTATTCAAAGATCCCTGCCAGCCAGGTGGGCAGTTGAGTGCCAGCCAGGTGGGCAGTaGAGTGCAGATTCCTGCGAC +
Preference number: 5 (lower is better)
Translates to: KLKIPIQRSLPARWAVECQPGGQ*SADSCD
Trigger: GTCGCAGGAATCTGCACTCAACTGCCCACCTGGCTG...GCACTCAACTGCCCACCTGGCTGGCAGGGATCTTTGAATAGGTATCTTGAGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR CAA 90 bp TGCGACCCCCGCCATTTTTGCTGTCTACTTAGAAGGGAAGTCAATGGCATACCCGGAACCAGCCCCAGGTaGCTGGGAAGCAAGGCTTTG +
Preference number: 5 (lower is better)
Translates to: CDPRHFCCLLRREVNGIPGTSPR*LGSKAL
Trigger: CAAAGCCTTGCTTCCCAGCAACCTGGGGCTGGTTCC...GGGTATGCCATTGACTTCCCTTCTAAGTAGACAGCAAAAATGGCGGGGGTCGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR CAA 90 bp TGGGAAGACAGAAGAGAGTGGGCCCCAGAGATGGAAGGACCCCAGTGTCATCACAGTACCTTCTCTCACTaGGTGGAACAGGCCAAGGAG +
Preference number: 5 (lower is better)
Translates to: WEDRREWAPEMEGPQCHHSTFSH*VEQAKE
Trigger: CTCCTTGGCCTGTTCCACCAAGTGAGAGAAGGTACT...GTGATGACACTGGGGTCCTTCCATCTCTGGGGCCCACTCTCTTCTGTCTTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS CCA 90 bp CCACATTCCGCTCCACAGCTTCCATGCGCACAGCATTTGAAGTCATaGGTGTCCCATACCCATTCCGTGCCTCACAGCTGTATTCTCCAG +
Preference number: 5 (lower is better)
Translates to: PHSAPQLPCAQHLKS*VSHTHSVPHSCILQ
Trigger: CTGGAGAATACAGCTGTGAGGCACGGAATGGGTATGGGACACCCATGACTTCAAATGCTGTGCGCATGGAAGCTGTGGAGCGGAATGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR CAA 90 bp CCTGGTCGTCAGTACACAAGGAAAGAGCCCAGAACCAAGCTCAAGATACCTATTAGGCAGGAGAATGGCTaGAACCCGGGAGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: PGRQYTRKEPRTKLKIPIRQENG*NPGGGG
Trigger: ACCTCCGCCTCCCGGGTTCAAGCCATTCTCCTGCCT...AATAGGTATCTTGAGCTTGGTTCTGGGCTCTTTCCTTGTGTACTGACGACCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR CAA 90 bp CCTGGTCGTCAGTACACAAGGAAAGAGCCCAGAACCAAGCTCAAGATACCTATTGGAACCAGCCCCAGGTaGCTGGGAAGCAAGGCTTTG +
Preference number: 5 (lower is better)
Translates to: PGRQYTRKEPRTKLKIPIGTSPR*LGSKAL
Trigger: CAAAGCCTTGCTTCCCAGCAACCTGGGGCTGGTTCC...AATAGGTATCTTGAGCTTGGTTCTGGGCTCTTTCCTTGTGTACTGACGACCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS CCA 90 bp TGTCCCAGTGTCTTCCCGTGTCACGGACTTGAAGGTGATACCAGTTaGCAAGAAGGTCACCCGGTCCTCATAGGAAGCTGTGATCTTGTT +
Preference number: 5 (lower is better)
Translates to: CPSVFPCHGLEGDTS*QEGHPVLIGSCDLV
Trigger: AACAAGATCACAGCTTCCTATGAGGACCGGGTGACCTTCTTGCCAACTGGTATCACCTTCAAGTCCGTGACACGGGAAGACACTGGGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335772.3
ENST00000368026.11
ENST00000472573.5
CDS-3UTR CAA 90 bp TGTAGAAGACAAATAAGGCATCCTGTGAAACTACAGACATCAGGGGCCAGAGTCTCTCGACTTGCGCCTTaGTCCCCATCGCGATCAGGC +
Preference number: 5 (lower is better)
Translates to: CRRQIRHPVKLQTSGARVSRLAP*SPSRSG
Trigger: GCCTGATCGCGATGGGGACAAAGGCGCAAGTCGAGA...GACTCTGGCCCCTGATGTCTGTAGTTTCACAGGATGCCTTATTTGTCTTCTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR CAA 90 bp GGGAAGTCAATGGCATACCCAGGATTCCTTCCTGATCCCTCAAAGAAATGGGGATCCCGTGTCACGGACTaGAAGGTGATACCAGTTGGC +
Preference number: 5 (lower is better)
Translates to: GKSMAYPGFLPDPSKKWGSRVTD*KVIPVG
Trigger: GCCAACTGGTATCACCTTCAAGTCCGTGACACGGGA...TCCCCATTTCTTTGAGGGATCAGGAAGGAATCCTGGGTATGCCATTGACTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR CAA 90 bp AAGCTCAAGATACCTATTCAAAGATCCCTGCCAGCCAGGTGGGCAGTTGAGTGCCCATGCGCACAGCATTaGAAGTCATGGGTGTCCCAT +
Preference number: 5 (lower is better)
Translates to: KLKIPIQRSLPARWAVECPCAQH*KSWVSH
Trigger: ATGGGACACCCATGACTTCAAATGCTGTGCGCATGG...GCACTCAACTGCCCACCTGGCTGGCAGGGATCTTTGAATAGGTATCTTGAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR CAA 90 bp CCTCAAATTCACAGAGCCATGAATCACCTCTGCTTCCCCATGACCTTTTCCATACAGCCAGGTGGGCAGTaGAGTGCAGATTCCTGCGAC +
Preference number: 5 (lower is better)
Translates to: PQIHRAMNHLCFPMTFSIQPGGQ*SADSCD
Trigger: GTCGCAGGAATCTGCACTCAACTGCCCACCTGGCTG...TATGGAAAAGGTCATGGGGAAGCAGAGGTGATTCATGGCTCTGTGAATTTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR CAA 90 bp CCTTGCCTCAGCTCTGGGACAGTAGTTCCTACAGCTGTAGGGAGGTCTGTTAATAGGCAAGAGAATTGCTaGAACCCAGGAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: PCLSSGTVVPTAVGRSVNRQENC*NPGGGG
Trigger: ACCTCCACCTCCTGGGTTCAAGCAATTCTCTTGCCT...ATTAACAGACCTCCCTACAGCTGTAGGAACTACTGTCCCAGAGCTGAGGCAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR CAA 90 bp TTAGAAGGGAAGTCAATGGCATACCCAGGATTCCTTCCTGATCCCTCAAAGAAATCTCGACTTGCGCCTTaGTCCCCATCGCGATCAGGC +
Preference number: 5 (lower is better)
Translates to: LEGKSMAYPGFLPDPSKKSRLAP*SPSRSG
Trigger: GCCTGATCGCGATGGGGACAAAGGCGCAAGTCGAGA...TTTCTTTGAGGGATCAGGAAGGAATCCTGGGTATGCCATTGACTTCCCTTCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR CAA 90 bp AGAAGACAAATAAGGCATCCTGTGAAACTACAGACATCAGGGGCCAGAGTCCGGAAGGCACGGGTGCTTTaGGGATTCGTAGGCATCACT +
Preference number: 5 (lower is better)
Translates to: RRQIRHPVKLQTSGARVRKARVL*GFVGIT
Trigger: AGTGATGCCTACGAATCCCAAAAGCACCCGTGCCTT...CCGGACTCTGGCCCCTGATGTCTGTAGTTTCACAGGATGCCTTATTTGTCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR CAA 90 bp GGGAAGTCAATGGCATACCCAGGATTCCTTCCTGATCCCTCAAAGAAATGGGGACCATGCGCACAGCATTaGAAGTCATGGGTGTCCCAT +
Preference number: 5 (lower is better)
Translates to: GKSMAYPGFLPDPSKKWGPCAQH*KSWVSH
Trigger: ATGGGACACCCATGACTTCAAATGCTGTGCGCATGG...TCCCCATTTCTTTGAGGGATCAGGAAGGAATCCTGGGTATGCCATTGACTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR CAA 90 bp TTAGAAGGGAAGTCAATGGCATACCCAGGATTCCTTCCTGATCCCTCAAAGAAACAGCCAGGTGGGCAGTaGAGTGCAGATTCCTGCGAC +
Preference number: 5 (lower is better)
Translates to: LEGKSMAYPGFLPDPSKKQPGGQ*SADSCD
Trigger: GTCGCAGGAATCTGCACTCAACTGCCCACCTGGCTG...TTTCTTTGAGGGATCAGGAAGGAATCCTGGGTATGCCATTGACTTCCCTTCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR CAA 90 bp TGGGAAGACAGAAGAGAGTGGGCCCCAGAGATGGAAGGACCCCAGTGTCATCACCCATTGTGGGGTTATTaGCATTTAAACACAGGCCAA +
Preference number: 5 (lower is better)
Translates to: WEDRREWAPEMEGPQCHHPLWGY*HLNTGQ
Trigger: TTGGCCTGTGTTTAAATGCAAATAACCCCACAATGG...GTGATGACACTGGGGTCCTTCCATCTCTGGGGCCCACTCTCTTCTGTCTTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR CAA 90 bp AAGCTCAAGATACCTATTCAAAGATCCCTGCCAGCCAGGTGGGCAGTTGAGTGCTCGAAGTCCCTTTCTTaGTTCTGTCAAAGTGGCCTC +
Preference number: 5 (lower is better)
Translates to: KLKIPIQRSLPARWAVECSKSLS*FCQSGL
Trigger: GAGGCCACTTTGACAGAACAAAGAAAGGGACTTCGA...GCACTCAACTGCCCACCTGGCTGGCAGGGATCTTTGAATAGGTATCTTGAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR CAA 90 bp TGCGACCCCCGCCATTTTTGCTGTCTACTTAGAAGGGAAGTCAATGGCATACCCTCGAAGTCCCTTTCTTaGTTCTGTCAAAGTGGCCTC +
Preference number: 5 (lower is better)
Translates to: CDPRHFCCLLRREVNGIPSKSLS*FCQSGL
Trigger: GAGGCCACTTTGACAGAACAAAGAAAGGGACTTCGA...GGGTATGCCATTGACTTCCCTTCTAAGTAGACAGCAAAAATGGCGGGGGTCGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR CAA 90 bp AGAAGACAAATAAGGCATCCTGTGAAACTACAGACATCAGGGGCCAGAGTCCGGTCAATGTCAGTCAGCTaGTATTCAGGAGGACAGGGC +
Preference number: 5 (lower is better)
Translates to: RRQIRHPVKLQTSGARVRSMSVS*YSGGQG
Trigger: GCCCTGTCCTCCTGAATACAAGCTGACTGACATTGA...CCGGACTCTGGCCCCTGATGTCTGTAGTTTCACAGGATGCCTTATTTGTCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR CAA 90 bp GCCATTTTTGCTGTCTACTTAGAAGGGAAGTCAATGGCATACCCAGGATTCCTTGCCAAGGTTGTACCATaGCACTCCAGCCTGGCAACG +
Preference number: 5 (lower is better)
Translates to: AIFAVYLEGKSMAYPGFLAKVVP*HSSLAT
Trigger: CGTTGCCAGGCTGGAGTGCAATGGTACAACCTTGGC...AAGGAATCCTGGGTATGCCATTGACTTCCCTTCTAAGTAGACAGCAAAAATGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS GCA 90 bp TTCACAGGATTATTCTCAGGAATTCTGACTTCAGGTTCAGAAGAGTaGACTGTAACACTGCCCAATGCCAGGGAGCACAACAGGATCGCC +
Preference number: 5 (lower is better)
Translates to: FTGLFSGILTSGSEE*TVTLPNAREHNRIA
Trigger: GGCGATCCTGTTGTGCTCCCTGGCATTGGGCAGTGTTACAGTGCACTCTTCTGAACCTGAAGTCAGAATTCCTGAGAATAATCCTGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS GCA 90 bp AACTCACGATTATTCTCAGGAATTCTGACTTCAGGTTCAGAAGAGTaGACTGTAACACTGCCCAATGCCAGGGAGCACAACAGGATCGCC +
Preference number: 5 (lower is better)
Translates to: NSRLFSGILTSGSEE*TVTLPNAREHNRIA
Trigger: GGCGATCCTGTTGTGCTCCCTGGCATTGGGCAGTGTTACAGTGCACTCTTCTGAACCTGAAGTCAGAATTCCTGAGAATAATCGTGAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602966.1
CDS-3UTR CAA 90 bp CAATTTCAGCATACAGCTAAGACTACACAACACACACACAAGCTCAACAAAGAGTCTCGACTTGCGCCTTaGTCCCCATCGCGATCAGGC +
Preference number: 5 (lower is better)
Translates to: QFQHTAKTTQHTHKLNKESRLAP*SPSRSG
Trigger: GCCTGATCGCGATGGGGACAAAGGCGCAAGTCGAGA...CTCTTTGTTGAGCTTGTGTGTGTGTTGTGTAGTCTTAGCTGTATGCTGAAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR CAA 90 bp CCTCAAATTCACAGAGCCATGAATCACCTCTGCTTCCCCATGACCTTTTCCATATCTGGTGGTGTCTCCTaGGTCAAACTTCCACTCCAC +
Preference number: 5 (lower is better)
Translates to: PQIHRAMNHLCFPMTFSISGGVS*VKLPLH
Trigger: GTGGAGTGGAAGTTTGACCAAGGAGACACCACCAGA...TATGGAAAAGGTCATGGGGAAGCAGAGGTGATTCATGGCTCTGTGAATTTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368026.11
CDS-3UTR CAA 90 bp GGTCGTCAGTACACAAGGAAAGAGCCCAGAACCAAGCTCAAGATACCTATTCAACCATGCGCACAGCATTaGAAGTCATGGGTGTCCCAT +
Preference number: 5 (lower is better)
Translates to: GRQYTRKEPRTKLKIPIQPCAQH*KSWVSH
Trigger: ATGGGACACCCATGACTTCAAATGCTGTGCGCATGG...TTGAATAGGTATCTTGAGCTTGGTTCTGGGCTCTTTCCTTGTGTACTGACGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR CAA 90 bp TGCGACCCCCGCCATTTTTGCTGTCTACTTAGAAGGGAAGTCAATGGCATACCCAATGACGAGGTCTGTTaGAATTCTCCTTCACTTCGG +
Preference number: 5 (lower is better)
Translates to: CDPRHFCCLLRREVNGIPNDEVC*NSPSLR
Trigger: CCGAAGTGAAGGAGAATTCAAACAGACCTCGTCATT...GGGTATGCCATTGACTTCCCTTCTAAGTAGACAGCAAAAATGGCGGGGGTCGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR CAA 90 bp GCTGGCCCTGGTCGTCAGTACACAAGGAAAGAGCCCAGAACCAAGCTCAAGATACCATTGTGGGGTTATTaGCATTTAAACACAGGCCAA +
Preference number: 5 (lower is better)
Translates to: AGPGRQYTRKEPRTKLKIPLWGY*HLNTGQ
Trigger: TTGGCCTGTGTTTAAATGCAAATAACCCCACAATGG...TATCTTGAGCTTGGTTCTGGGCTCTTTCCTTGTGTACTGACGACCAGGGCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS GCA 90 bp CTTTCTTTGTTCTGTCAAAGTGGCCTCGGCTATAGGCAAACCAGATaGCAAAAACCAAGATTCCCAGGAGAATCAGGGTTACAAGGACGG +
Preference number: 5 (lower is better)
Translates to: LSLFCQSGLGYRQTR*QKPRFPGESGLQGR
Trigger: CCGTCCTTGTAACCCTGATTCTCCTGGGAATCTTGGTTTTTGGCATCTGGTTTGCCTATAGCCGAGGCCACTTTGACAGAACAAAGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR CAA 90 bp CAATTTCAGCATACAGCTAAGACTACACAACACACACACAAGCTCAACAAAGAGCAGTTTCCTCTCGACTaGCGCCTTTGTCCCCATCGC +
Preference number: 5 (lower is better)
Translates to: QFQHTAKTTQHTHKLNKEQFPLD*RLCPHR
Trigger: GCGATGGGGACAAAGGCGCAAGTCGAGAGGAAACTG...CTCTTTGTTGAGCTTGTGTGTGTGTTGTGTAGTCTTAGCTGTATGCTGAAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR CAA 90 bp TTAGAAGGGAAGTCAATGGCATACCCAGGATTCCTTCCTGATCCCTCAAAGAAATCTGGTGGTGTCTCCTaGGTCAAACTTCCACTCCAC +
Preference number: 5 (lower is better)
Translates to: LEGKSMAYPGFLPDPSKKSGGVS*VKLPLH
Trigger: GTGGAGTGGAAGTTTGACCAAGGAGACACCACCAGA...TTTCTTTGAGGGATCAGGAAGGAATCCTGGGTATGCCATTGACTTCCCTTCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000537746.1
CDS-3UTR CAA 90 bp GGTCGTCAGTACACAAGGAAAGAGCCCAGAACCAAGCTCAAGATACCTATTCAATCAATGTCAGTCAGCTaGTATTCAGGAGGACAGGGC +
Preference number: 5 (lower is better)
Translates to: GRQYTRKEPRTKLKIPIQSMSVS*YSGGQG
Trigger: GCCCTGTCCTCCTGAATACAAGCTGACTGACATTGA...TTGAATAGGTATCTTGAGCTTGGTTCTGGGCTCTTTCCTTGTGTACTGACGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR CAA 90 bp TTAGAAGGGAAGTCAATGGCATACCCAGGATTCCTTCCTGATCCCTCAAAGAAAAGGCAAGAGAATTGCTaGAACCCAGGAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: LEGKSMAYPGFLPDPSKKRQENC*NPGGGG
Trigger: ACCTCCACCTCCTGGGTTCAAGCAATTCTCTTGCCT...TTTCTTTGAGGGATCAGGAAGGAATCCTGGGTATGCCATTGACTTCCCTTCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR CAA 90 bp TGTACAAAGGAGCCTAGGAACCCTCAAAGACCTTTTCCCCTACTTACTTCCCACAATGACGAGGTCTGTTaGAATTCTCCTTCACTTCGG +
Preference number: 5 (lower is better)
Translates to: CTKEPRNPQRPFPLLTSHNDEVC*NSPSLR
Trigger: CCGAAGTGAAGGAGAATTCAAACAGACCTCGTCATT...GTGGGAAGTAAGTAGGGGAAAAGGTCTTTGAGGGTTCCTAGGCTCCTTTGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR CAA 90 bp CCAGGATTCCTTCCTGATCCCTCAAAGAAATGGGGAATAAACACTTTAAACAAGAAGGCACGGGTGCTTTaGGGATTCGTAGGCATCACT +
Preference number: 5 (lower is better)
Translates to: PGFLPDPSKKWGINTLNKKARVL*GFVGIT
Trigger: AGTGATGCCTACGAATCCCAAAAGCACCCGTGCCTT...CTTGTTTAAAGTGTTTATTCCCCATTTCTTTGAGGGATCAGGAAGGAATCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR CAA 90 bp GGTCGTCAGTACACAAGGAAAGAGCCCAGAACCAAGCTCAAGATACCTATTCAAAATGACGAGGTCTGTTaGAATTCTCCTTCACTTCGG +
Preference number: 5 (lower is better)
Translates to: GRQYTRKEPRTKLKIPIQNDEVC*NSPSLR
Trigger: CCGAAGTGAAGGAGAATTCAAACAGACCTCGTCATT...TTGAATAGGTATCTTGAGCTTGGTTCTGGGCTCTTTCCTTGTGTACTGACGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR CAA 90 bp CATTTTTGCTGTCTACTTAGAAGGGAAGTCAATGGCATACCCAGGATTCCTTCCATGTTAACTGTAGGCTaGGATGGAGGCACTGTGATC +
Preference number: 5 (lower is better)
Translates to: HFCCLLRREVNGIPRIPSMLTVG*DGGTVI
Trigger: GATCACAGTGCCTCCATCCAAGCCTACAGTTAACAT...GGAAGGAATCCTGGGTATGCCATTGACTTCCCTTCTAAGTAGACAGCAAAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537746.1
CDS-3UTR CAA 90 bp GGATTCCTTCCTGATCCCTCAAAGAAATGGGGAATAAACACTTTAAACAAGTTCAGTACCTTCTCTCACTaGGTGGAACAGGCCAAGGAG +
Preference number: 5 (lower is better)
Translates to: GFLPDPSKKWGINTLNKFSTFSH*VEQAKE
Trigger: CTCCTTGGCCTGTTCCACCAAGTGAGAGAAGGTACT...GAACTTGTTTAAAGTGTTTATTCCCCATTTCTTTGAGGGATCAGGAAGGAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR CAA 90 bp CATTTTTGCTGTCTACTTAGAAGGGAAGTCAATGGCATACCCAGGATTCCTTCCACAGGAAAAACAGTGTaGGTCAAAGGGTACACGCTT +
Preference number: 5 (lower is better)
Translates to: HFCCLLRREVNGIPRIPSTGKTV*VKGYTL
Trigger: AAGCGTGTACCCTTTGACCAACACTGTTTTTCCTGT...GGAAGGAATCCTGGGTATGCCATTGACTTCCCTTCTAAGTAGACAGCAAAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS GCA 90 bp TTCACAGGATTATTCTCAGGAATTCTGACTTCAGGTTCAGAAGAGTaGACTGTAACACTGCCCAATGCCAGGGAGCACAATTATTCTCAT +
Preference number: 5 (lower is better)
Translates to: FTGLFSGILTSGSEE*TVTLPNAREHNYSH
Trigger: ATGAGAATAATTGTGCTCCCTGGCATTGGGCAGTGTTACAGTGCACTCTTCTGAACCTGAAGTCAGAATTCCTGAGAATAATCCTGTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335772.3
CDS-3UTR CAA 90 bp TGTAGAAGACAAATAAGGCATCCTGTGAAACTACAGACATCAGGGGCCAGAGTCATCACTATCCCATCTTaGAACCAGGTGTATTCAGAA +
Preference number: 5 (lower is better)
Translates to: CRRQIRHPVKLQTSGARVITIPS*NQVYSE
Trigger: TTCTGAATACACCTGGTTCAAAGATGGGATAGTGAT...GACTCTGGCCCCTGATGTCTGTAGTTTCACAGGATGCCTTATTTGTCTTCTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR CAA 90 bp CCAGGATTCCTTCCTGATCCCTCAAAGAAATGGGGAATAAACACTTTAAACAAGTCGAAGTCCCTTTCTTaGTTCTGTCAAAGTGGCCTC +
Preference number: 5 (lower is better)
Translates to: PGFLPDPSKKWGINTLNKSKSLS*FCQSGL
Trigger: GAGGCCACTTTGACAGAACAAAGAAAGGGACTTCGA...CTTGTTTAAAGTGTTTATTCCCCATTTCTTTGAGGGATCAGGAAGGAATCCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR CAA 90 bp TTAGAAGGGAAGTCAATGGCATACCCAGGATTCCTTCCTGATCCCTCAAAGAAAATCACTATCCCATCTTaGAACCAGGTGTATTCAGAA +
Preference number: 5 (lower is better)
Translates to: LEGKSMAYPGFLPDPSKKITIPS*NQVYSE
Trigger: TTCTGAATACACCTGGTTCAAAGATGGGATAGTGAT...TTTCTTTGAGGGATCAGGAAGGAATCCTGGGTATGCCATTGACTTCCCTTCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS-3UTR CAA 90 bp CCAGGATTCCTTCCTGATCCCTCAAAGAAATGGGGAATAAACACTTTAAACAAGACAGGAAAAACAGTGTaGGTCAAAGGGTACACGCTT +
Preference number: 5 (lower is better)
Translates to: PGFLPDPSKKWGINTLNKTGKTV*VKGYTL
Trigger: AAGCGTGTACCCTTTGACCAACACTGTTTTTCCTGT...CTTGTTTAAAGTGTTTATTCCCCATTTCTTTGAGGGATCAGGAAGGAATCCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368026.11
ENST00000621309.4
CDS-3UTR CAA 90 bp GGATTCCTTCCTGATCCCTCAAAGAAATGGGGAATAAACACTTTAAACAAGTTCATCACTATCCCATCTTaGAACCAGGTGTATTCAGAA +
Preference number: 5 (lower is better)
Translates to: GFLPDPSKKWGINTLNKFITIPS*NQVYSE
Trigger: TTCTGAATACACCTGGTTCAAAGATGGGATAGTGAT...GAACTTGTTTAAAGTGTTTATTCCCCATTTCTTTGAGGGATCAGGAAGGAATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS TCA 72 bp GGAACAGACACAGCTCCGCGACTACAGCGAGGGGACTaGGAGCCAGCCGCCAGGTGGAACCCCGCCCGGCCC +
Preference number: 6 (lower is better)
Translates to: GTDTAPRLQRGD*EPAARWNPARP
Trigger: GGGCCGGGCGGGGTTCCACCTGGCGGCTGGCTCTCAGTCCCCTCGCTGTAGTCGCGGAGCTGTGTCTGTTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621309.4
CDS GCA 72 bp GCTGGGTGCTCTCTAGATCCCCAGGCGGCCGGCAACTaGTCACCCTCACACCCTCCATGGCCCCTCCCAACT +
Preference number: 6 (lower is better)
Translates to: AGCSLDPQAAGN*SPSHPPWPLPT
Trigger: AGTTGGGAGGGGCCATGGAGGGTGTGAGGGTGAGCAGTTGCCGGCCGCCTGGGGATCTAGAGAGCACCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602966.1
CDS CCA 72 bp ATCAGGCTCCCGACACAACAGCCGCCGAAGGACTCCTaGGAACAGACACAGCTCCGCGACTACAGCGAGGGG +
Preference number: 6 (lower is better)
Translates to: IRLPTQQPPKDS*EQTQLRDYSEG
Trigger: CCCCTCGCTGTAGTCGCGGAGCTGTGTCTGTTCCCAGGAGTCCTTCGGCGGCTGTTGTGTCGGGAGCCTGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000602966.1
ENST00000621309.4
CDS GCA 72 bp CCACCCCTGCACGTTCCGATTGGTGTAAGGAACCGCTaGTCTTCAGAACGAGTCACCTCGGCCAGGTGTTAC +
Preference number: 6 (lower is better)
Translates to: PPLHVPIGVRNR*SSERVTSARCY
Trigger: GTAACACCTGGCCGAGGTGACTCGTTCTGAAGAGCAGCGGTTCCTTACACCAATCGGAACGTGCAGGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621309.4
CDS GCA 72 bp CAAGATTCCCAGGAGAATCAGGGTTACAAGGACGGCTaGCACGATGACCCCCACATTCCGCTCCACAGCTTC +
Preference number: 6 (lower is better)
Translates to: QDSQENQGYKDG*HDDPHIPLHSF
Trigger: GAAGCTGTGGAGCGGAATGTGGGGGTCATCGTGGCAGCCGTCCTTGTAACCCTGATTCTCCTGGGAATCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS CAA 72 bp CGCCAATATGAAGAGGCACAACAGTTTCCTCTCGACTaGCGCCTTTGTCCCCATCGCGATCAGGCTCCCGAC +
Preference number: 6 (lower is better)
Translates to: RQYEEAQQFPLD*RLCPHRDQAPD
Trigger: GTCGGGAGCCTGATCGCGATGGGGACAAAGGCGCAAGTCGAGAGGAAACTGTTGTGCCTCTTCATATTGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335772.3
ENST00000368026.11
ENST00000537746.1
ENST00000602966.1
ENST00000621309.4
CDS CAA 90 bp CAACAGGATCGCCAATATGAAGAGGCACAACAGTTTCCTCTCGACTaGCGCCTTTGTCCCCATCGCGATCAGGCTCCCGACACAACAGCC +
Preference number: 6 (lower is better)
Translates to: QQDRQYEEAQQFPLD*RLCPHRDQAPDTTA
Trigger: GGCTGTTGTGTCGGGAGCCTGATCGCGATGGGGACAAAGGCGCAAGTCGAGAGGAAACTGTTGTGCCTCTTCATATTGGCGATCCTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335772.3
ENST00000368026.11
ENST00000602966.1
ENST00000621309.4
CDS TCA 72 bp CCAGGTGTATTCAGAAGGTGGGGAACCATCTTGTTCTaGGCATGTCAGCACTGCCCGGTTCCCAATGGTGGC +
Preference number: 6 (lower is better)
Translates to: PGVFRRWGTILF*ACQHCPVPNGG
Trigger: GCCACCATTGGGAACCGGGCAGTGCTGACATGCTCAGAACAAGATGGTTCCCCACCTTCTGAATACACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368026.11
ENST00000472573.5
ENST00000537746.1
ENST00000621309.4
CDS TCA 72 bp CCGTGCCTCACAGCTGTATTCTCCAGTATCAGAGGCTaGCAGGGGATCAAAGACCAGCTCTCCTGTTGTGGG +
Preference number: 6 (lower is better)
Translates to: PCLTAVFSSIRG*QGIKDQLSCCG
Trigger: CCCACAACAGGAGAGCTGGTCTTTGATCCCCTGTCAGCCTCTGATACTGGAGAATACAGCTGTGAGGCACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368026.11
ENST00000472573.5
ENST00000537746.1
ENST00000621309.4
CDS TCA 72 bp CACATTCCGCTCCACAGCTTCCATGCGCACAGCATTTaGAGTCATGGGTGTCCCATACCCATTCCGTGCCTC +
Preference number: 6 (lower is better)
Translates to: HIPLHSFHAHSI*SHGCPIPIPCL
Trigger: GAGGCACGGAATGGGTATGGGACACCCATGACTTCAAATGCTGTGCGCATGGAAGCTGTGGAGCGGAATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS GCA 72 bp GCCAATATGAAGAGGCACAACAGTTTCCTCTCGACTTaGGCCTTTGTCCCCATCGCGATCAGGCTCCCGACA +
Preference number: 6 (lower is better)
Translates to: ANMKRHNSFLST*AFVPIAIRLPT
Trigger: TGTCGGGAGCCTGATCGCGATGGGGACAAAGGCGCAAGTCGAGAGGAAACTGTTGTGCCTCTTCATATTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335772.3
ENST00000368026.11
ENST00000537746.1
ENST00000602966.1
ENST00000621309.4
CDS CCA 72 bp GCTCCACAGCTTCCATGCGCACAGCATTTGAAGTCATaGGTGTCCCATACCCATTCCGTGCCTCACAGCTGT +
Preference number: 6 (lower is better)
Translates to: APQLPCAQHLKS*VSHTHSVPHSC
Trigger: ACAGCTGTGAGGCACGGAATGGGTATGGGACACCCATGACTTCAAATGCTGTGCGCATGGAAGCTGTGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS CAA 72 bp CCACATTCCGCTCCACAGCTTCCATGCGCACAGCATTaGAAGTCATGGGTGTCCCATACCCATTCCGTGCCT +
Preference number: 6 (lower is better)
Translates to: PHSAPQLPCAQH*KSWVSHTHSVP
Trigger: AGGCACGGAATGGGTATGGGACACCCATGACTTCAAATGCTGTGCGCATGGAAGCTGTGGAGCGGAATGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS TCA 72 bp TGCCCAATGCCAGGGAGCACAACAGGATCGCCAATATaGAGAGGCACAACAGTTTCCTCTCGACTTGCGCCT +
Preference number: 6 (lower is better)
Translates to: CPMPGSTTGSPI*RGTTVSSRLAP
Trigger: AGGCGCAAGTCGAGAGGAAACTGTTGTGCCTCTTCATATTGGCGATCCTGTTGTGCTCCCTGGCATTGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000602966.1
ENST00000621309.4
CDS CCA 72 bp GTCTTCCCGTGTCACGGACTTGAAGGTGATACCAGTTaGCAAGAAGGTCACCCGGTCCTCATAGGAAGCTGT +
Preference number: 6 (lower is better)
Translates to: VFPCHGLEGDTS*QEGHPVLIGSC
Trigger: ACAGCTTCCTATGAGGACCGGGTGACCTTCTTGCCAACTGGTATCACCTTCAAGTCCGTGACACGGGAAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335772.3
ENST00000368026.11
ENST00000472573.5
CDS CCA 72 bp GTCTTCCCGTGTCACGGACTTGAAGGTGATACCAGTTaGCAAGAAGGTCACCCGGTCCTCATAGGAAGGAGT +
Preference number: 6 (lower is better)
Translates to: VFPCHGLEGDTS*QEGHPVLIGRS
Trigger: ACTCCTTCCTATGAGGACCGGGTGACCTTCTTGCCAACTGGTATCACCTTCAAGTCCGTGACACGGGAAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621309.4
CDS CAA 72 bp CAAGTGTATGTCCCAGTGTCTTCCCGTGTCACGGACTaGAAGGTGATACCAGTTGGCAAGAAGGTCACCCGG +
Preference number: 6 (lower is better)
Translates to: QVYVPVSSRVTD*KVIPVGKKVTR
Trigger: CCGGGTGACCTTCTTGCCAACTGGTATCACCTTCAAGTCCGTGACACGGGAAGACACTGGGACATACACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335772.3
ENST00000368026.11
ENST00000472573.5
ENST00000621309.4
CDS GCA 72 bp AGAAAAGCCCGAGTAGGCACAGGACAACTTCACAGCTaGAGACAGGGTCAAAATGAGCCGAAGGAAGAAGCA +
Preference number: 6 (lower is better)
Translates to: RKARVGTGQLHS*RQGQNEPKEEA
Trigger: TGCTTCTTCCTTCGGCTCATTTTGACCCTGTCTGCAGCTGTGAAGTTGTCCTGTGCCTACTCGGGCTTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000472573.5
ENST00000602966.1
CDS CAA 90 bp AAGGCACGGGTGCTTTTGGGATTCGTAGGCATCACTATCCCATCTTaGAACCAGGTGTATTCAGAAGGTGGGGAACCATCTTGTTCTGAG +
Preference number: 6 (lower is better)
Translates to: KARVLLGFVGITIPS*NQVYSEGGEPSCSE
Trigger: CTCAGAACAAGATGGTTCCCCACCTTCTGAATACACCTGGTTCAAAGATGGGATAGTGATGCCTACGAATCCCAAAAGCACCCGTGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368026.11
ENST00000472573.5
ENST00000537746.1
ENST00000621309.4
CDS CAA 90 bp AGCTGTGATCTTGTTATTATAGCAAACGAGTCTGGTGGTGTCTCCTaGGTCAAACTTCCACTCCACACGGGGAGAAGAAAAGCCCGAGTA +
Preference number: 6 (lower is better)
Translates to: SCDLVIIANESGGVS*VKLPLHTGRRKARV
Trigger: TACTCGGGCTTTTCTTCTCCCCGTGTGGAGTGGAAGTTTGACCAAGGAGACACCACCAGACTCGTTTGCTATAATAACAAGATCACAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335772.3
ENST00000368026.11
ENST00000472573.5
ENST00000602966.1
CDS CAA 90 bp CACTGTGATCTTGTTATTATAGCAAACGAGTCTGGTGGTGTCTCCTaGGTCAAACTTCCACTCCACACGGGGAGAAGAAAAGCCCGAGTA +
Preference number: 6 (lower is better)
Translates to: HCDLVIIANESGGVS*VKLPLHTGRRKARV
Trigger: TACTCGGGCTTTTCTTCTCCCCGTGTGGAGTGGAAGTTTGACCAAGGAGACACCACCAGACTCGTTTGCTATAATAACAAGATCACAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537746.1
CDS GCA 72 bp TTATTCTCAGGAATTCTGACTTCAGGTTCAGAAGAGTaGACTGTAACACTGCCCAATGCCAGGGAGCACAAC +
Preference number: 6 (lower is better)
Translates to: LFSGILTSGSEE*TVTLPNAREHN
Trigger: GTTGTGCTCCCTGGCATTGGGCAGTGTTACAGTGCACTCTTCTGAACCTGAAGTCAGAATTCCTGAGAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000602966.1
ENST00000621309.4
CDS GCA 72 bp TTCTGTCAAAGTGGCCTCGGCTATAGGCAAACCAGATaGCAAAAACCAAGATTCCCAGGAGAATCAGGGTTA +
Preference number: 6 (lower is better)
Translates to: FCQSGLGYRQTR*QKPRFPGESGL
Trigger: TAACCCTGATTCTCCTGGGAATCTTGGTTTTTGGCATCTGGTTTGCCTATAGCCGAGGCCACTTTGACAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368026.11
ENST00000537746.1
ENST00000621309.4
CDS CAA 72 bp GTGCTTTTGGGATTCGTAGGCATCACTATCCCATCTTaGAACCAGGTGTATTCAGAAGGTGGGGAACCATCT +
Preference number: 6 (lower is better)
Translates to: VLLGFVGITIPS*NQVYSEGGEPS
Trigger: AGATGGTTCCCCACCTTCTGAATACACCTGGTTCAAAGATGGGATAGTGATGCCTACGAATCCCAAAAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368026.11
ENST00000472573.5
ENST00000537746.1
ENST00000621309.4
CDS GCA 72 bp TTATTCTCAGGAATTCTGACTTCAGGTTCAGAAGAGTaGACTGTAACACTGCCCAATGCCAGGGAGCACAAT +
Preference number: 6 (lower is better)
Translates to: LFSGILTSGSEE*TVTLPNAREHN
Trigger: ATTGTGCTCCCTGGCATTGGGCAGTGTTACAGTGCACTCTTCTGAACCTGAAGTCAGAATTCCTGAGAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335772.3
CDS CAA 72 bp CTTGTTATTATAGCAAACGAGTCTGGTGGTGTCTCCTaGGTCAAACTTCCACTCCACACGGGGAGAAGAAAA +
Preference number: 6 (lower is better)
Translates to: LVIIANESGGVS*VKLPLHTGRRK
Trigger: TTTTCTTCTCCCCGTGTGGAGTGGAAGTTTGACCAAGGAGACACCACCAGACTCGTTTGCTATAATAACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335772.3
ENST00000368026.11
ENST00000472573.5
ENST00000537746.1
ENST00000602966.1