RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for F10 (Homo sapiens)

Ensembl gene IDs: ENSG00000126218

Ensembl transcript IDs: ENST00000375551.7, ENST00000375559.8, ENST00000409306.5, ENST00000410083.6, ENST00000477269.5, ENST00000483537.1

Found 292 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGTCATCAGCGTaGACTCGGCCCAGTCACGCTCGGGGAGGCAGGCAGGCGCCACGT +
Preference number: 1 (lower is better)
Translates to: CARSRSQSPSSASSA*TRPSHARGGRQAPR
Trigger: ACGTGGCGCCTGCCTGCCTCCCCGAGCGTGACTGGGCCGAGTCCACGCTGATGACGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
3UTR GCA 90 bp CCCTTCTCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTaGGTCATCAGCGTGGACTCGGCCCAGTCACGCTCGGGGAGGCAG +
Preference number: 1 (lower is better)
Translates to: PFSWVRPKPLTIPVF*VISVDSAQSRSGRQ
Trigger: CTGCCTCCCCGAGCGTGACTGGGCCGAGTCCACGCTGATGACGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
3UTR CCA 90 bp GGCACCTCCAGCATCTTGAGCCTGGTGGACTGCCGGCCCTTCTCGTaGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGTCATC +
Preference number: 1 (lower is better)
Translates to: GTSSILSLVDCRPFS*VRPKPLTIPVFCVI
Trigger: GATGACGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGGGCCGGCAGTCCACCAGGCTCAAGATGCTGGAGGTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
3UTR GCA 90 bp CTCCAGGTACCTGCCCCTCACACCTCCGGGATGGCCGGTACCCCCTaGCCCAGCAGCACTCACATTACGGTCACTCCACATCCCTCTGTG +
Preference number: 1 (lower is better)
Translates to: LQVPAPHTSGMAGTP*PSSTHITVTPHPSV
Trigger: CACAGAGGGATGTGGAGTGACCGTAATGTGAGTGCTGCTGGGGCAGGGGGTACCGGCCATCCCGGAGGTGTGAGGGGCAGGTACCTGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410083.6
3UTR CCA 90 bp GCTGCAGAGCTTCCGTGTGACTGCAAAGGAGAGGCACGTTGGCTCTaGGGACAGCTGGAGAAATGGAGGCTGGGCTGGCCCAAGGGTGCC +
Preference number: 1 (lower is better)
Translates to: AAELPCDCKGEARWL*GQLEKWRLGWPKGA
Trigger: GGCACCCTTGGGCCAGCCCAGCCTCCATTTCTCCAGCTGTCCCCAGAGCCAACGTGCCTCTCCTTTGCAGTCACACGGAAGCTCTGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410083.6
3UTR CCA 90 bp TTCCATGTGATGCTGTCAGGGGCCTCCCCGCTGCTGCTGGTGGCCTaGGCCACTGACCTCTTCCTGCGTTCCAGGGTCTGTTTCCCACAG +
Preference number: 1 (lower is better)
Translates to: FHVMLSGASPLLLVA*ATDLFLRSRVCFPQ
Trigger: CTGTGGGAAACAGACCCTGGAACGCAGGAAGAGGTCAGTGGCCCAGGCCACCAGCAGCAGCGGGGAGGCCCCTGACAGCATCACATGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410083.6
3UTR CCA 90 bp TTGATGAGCAGGGCCTGCCAGGGACACTCCCCGTCCTTGCATTCCTaGCCTCCCACGATCCTGGTGAGGTTGTTGTCGCCCCTCTCAGGC +
Preference number: 1 (lower is better)
Translates to: LMSRACQGHSPSLHS*PPTILVRLLSPLSG
Trigger: GCCTGAGAGGGGCGACAACAACCTCACCAGGATCGTGGGAGGCCAGGAATGCAAGGACGGGGAGTGTCCCTGGCAGGCCCTGCTCATCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410083.6
3UTR TCA 90 bp TGGGTTGAGCAAAGGGCCAGAGCCAGGCGACAGGTACACTTGCCTTaGAGGGCAACCTCACGGGTCACGGGGAGCTCATGGTGCAGTGCC +
Preference number: 1 (lower is better)
Translates to: WVEQRARARRQVHLP*RATSRVTGSSWCSA
Trigger: GGCACTGCACCATGAGCTCCCCGTGACCCGTGAGGTTGCCCTTCAAGGCAAGTGTACCTGTCGCCTGGCTCTGGCCCTTTGCTCAACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410083.6
3UTR GCA 90 bp TGGCCTCCCACGATCCTGGTGAGGTTGTTGTCGCCCCTCTCAGGCTaGGTCTGGTTGAAGTCAAGCAGGTCGAAGGGGTTCTCGGTGGGG +
Preference number: 1 (lower is better)
Translates to: WPPTILVRLLSPLSG*VWLKSSRSKGFSVG
Trigger: CCCCACCGAGAACCCCTTCGACCTGCTTGACTTCAACCAGACGCAGCCTGAGAGGGGCGACAACAACCTCACCAGGATCGTGGGAGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410083.6
3UTR CCA 90 bp GTGTACCCGCGGGCGCAGGAGCACACCACAGAGTTCTGTTCCTCGTaGCAGAACTGGTCACAGTCCCCGTTGTCCAGGCTGCAGAGCTTC +
Preference number: 1 (lower is better)
Translates to: VYPRAQEHTTEFCSS*QNWSQSPLSRLQSF
Trigger: GAAGCTCTGCAGCCTGGACAACGGGGACTGTGACCAGTTCTGCCACGAGGAACAGAACTCTGTGGTGTGCTCCTGCGCCCGCGGGTACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410083.6
3UTR GCA 90 bp GCCATTGGGTTGAGCAAAGGGCCAGAGCCAGGCGACAGGTACACTTaGCTTGAAGGGCAACCTCACGGGTCACGGGGAGCTCATGGTGCA +
Preference number: 1 (lower is better)
Translates to: AIGLSKGPEPGDRYT*LEGQPHGSRGAHGA
Trigger: TGCACCATGAGCTCCCCGTGACCCGTGAGGTTGCCCTTCAAGGCAAGTGTACCTGTCGCCTGGCTCTGGCCCTTTGCTCAACCCAATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410083.6
3UTR CCA 90 bp GACTGCAAAGGAGAGGCACGTTGGCTCTGGGGACAGCTGGAGAAATaGAGGCTGGGCTGGCCCAAGGGTGCCAGCTACATCCACTTGCCT +
Preference number: 1 (lower is better)
Translates to: DCKGEARWLWGQLEK*RLGWPKGASYIHLP
Trigger: AGGCAAGTGGATGTAGCTGGCACCCTTGGGCCAGCCCAGCCTCCATTTCTCCAGCTGTCCCCAGAGCCAACGTGCCTCTCCTTTGCAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410083.6
3UTR CCA 90 bp CGGGCGCAGGAGCACACCACAGAGTTCTGTTCCTCGTGGCAGAACTaGTCACAGTCCCCGTTGTCCAGGCTGCAGAGCTTCCGTGTGACT +
Preference number: 1 (lower is better)
Translates to: RAQEHTTEFCSSWQN*SQSPLSRLQSFRVT
Trigger: AGTCACACGGAAGCTCTGCAGCCTGGACAACGGGGACTGTGACCAGTTCTGCCACGAGGAACAGAACTCTGTGGTGTGCTCCTGCGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410083.6
3UTR CCA 90 bp GGGTGCCAGCTACATCCACTTGCCTGTCAGCCACAAAGCGGCCATTaGGTTGAGCAAAGGGCCAGAGCCAGGCGACAGGTACACTTGCCT +
Preference number: 1 (lower is better)
Translates to: GCQLHPLACQPQSGH*VEQRARARRQVHLP
Trigger: AGGCAAGTGTACCTGTCGCCTGGCTCTGGCCCTTTGCTCAACCCAATGGCCGCTTTGTGGCTGACAGGCAAGTGGATGTAGCTGGCACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410083.6
3UTR TCA 90 bp AGAACTGGTCACAGTCCCCGTTGTCCAGGCTGCAGAGCTTCCGTGTaGCTGCAAAGGAGAGGCACGTTGGCTCTGGGGACAGCTGGAGAA +
Preference number: 1 (lower is better)
Translates to: RTGHSPRCPGCRASV*LQRRGTLALGTAGE
Trigger: TTCTCCAGCTGTCCCCAGAGCCAACGTGCCTCTCCTTTGCAGTCACACGGAAGCTCTGCAGCCTGGACAACGGGGACTGTGACCAGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410083.6
3UTR-3UTR CCA 90 bp GGCGGTGACCTTGGTGTAGATCCCGTACTTCCCCTTACGGGCACAGCCCTCTCCTGCCGGCCCTTCTCGTaGGTGCGCCCGAAGCCGCTC +
Preference number: 2 (lower is better)
Translates to: GGDLGVDPVLPLTGTALSCRPFS*VRPKPL
Trigger: GAGCGGCTTCGGGCGCACCCACGAGAAGGGCCGGCA...GGAGAGGGCTGTGCCCGTAAGGGGAAGTACGGGATCTACACCAAGGTCACCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
3UTR-3UTR GCA 90 bp GAATGCAGGCCTTGCCGTTGTCAGCCAGGGTGTACCCGCGGGCGCAGGAGCACAACGGGGAGCTCATGGTaGAGTGCCCGGTGTAGCCAG +
Preference number: 2 (lower is better)
Translates to: ECRPCRCQPGCTRGRRSTTGSSW*SARCSQ
Trigger: CTGGCTACACCGGGCACTGCACCATGAGCTCCCCGT...TGTGCTCCTGCGCCCGCGGGTACACCCTGGCTGACAACGGCAAGGCCTGCATTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410083.6
3UTR-3UTR GCA 90 bp GCTGACGATGCCTGTCACGAAGTAGGTGTCCTTGAAGCGGGTGACGTGCGGGCCTTGAGCCTGGTGGACTaGCGGCCCTTCTCGTGGGTG +
Preference number: 2 (lower is better)
Translates to: ADDACHEVGVLEAGDVRALSLVD*RPFSWV
Trigger: CACCCACGAGAAGGGCCGGCAGTCCACCAGGCTCAA...GGCCCGCACGTCACCCGCTTCAAGGACACCTACTTCGTGACAGGCATCGTCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
3UTR-3UTR CCA 90 bp GGGTTGAGCAAAGGGCCAGAGCCAGGCGACAGGTACACTTGCCTTGAAGGGCAACTCACACCTCCGGGATaGCCGGTACCCCCTGCCCCA +
Preference number: 2 (lower is better)
Translates to: GLSKGPEPGDRYTCLEGQLTPPG*PVPPAP
Trigger: TGGGGCAGGGGGTACCGGCCATCCCGGAGGTGTGAG...TTGCCCTTCAAGGCAAGTGTACCTGTCGCCTGGCTCTGGCCCTTTGCTCAACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410083.6
3UTR-3UTR GCA 90 bp TCGTGGCAGAACTGGTCACAGTCCCCGTTGTCCAGGCTGCAGAGCTTCCGTGTGCAGGCTCCAGGTACCTaGCCCTCACACCTCCGGGAT +
Preference number: 2 (lower is better)
Translates to: SWQNWSQSPLSRLQSFRVQAPGT*PSHLRD
Trigger: ATCCCGGAGGTGTGAGGGGCAGGTACCTGGAGCCTG...CACACGGAAGCTCTGCAGCCTGGACAACGGGGACTGTGACCAGTTCTGCCACGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410083.6
3UTR CAA 90 bp TCCCCGTCCTTGCATTCCTGGCCTCCCACGATCCTGGTGAGGTTGTaGTCGCCCCTCTCAGGCTGCGTCTGGTTGAAGTCAAGCAGGTCG +
Preference number: 2 (lower is better)
Translates to: SPSLHSWPPTILVRL*SPLSGCVWLKSSRS
Trigger: CGACCTGCTTGACTTCAACCAGACGCAGCCTGAGAGGGGCGACAACAACCTCACCAGGATCGTGGGAGGCCAGGAATGCAAGGACGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410083.6
3UTR CAA 90 bp CACTCCCCGTCCTTGCATTCCTGGCCTCCCACGATCCTGGTGAGGTaGTTGTCGCCCCTCTCAGGCTGCGTCTGGTTGAAGTCAAGCAGG +
Preference number: 2 (lower is better)
Translates to: HSPSLHSWPPTILVR*LSPLSGCVWLKSSR
Trigger: CCTGCTTGACTTCAACCAGACGCAGCCTGAGAGGGGCGACAACAACCTCACCAGGATCGTGGGAGGCCAGGAATGCAAGGACGGGGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410083.6
3UTR-3UTR TCA 90 bp CCACTGACCTCTTCCTGCGTTCCAGGGTCTGTTTCCCACAGGGGTAGGGCCCTGCAGGTACACTTGCCTTaGAGGGCAACCTCACGGGTC +
Preference number: 2 (lower is better)
Translates to: PLTSSCVPGSVSHRGRALQVHLP*RATSRV
Trigger: GACCCGTGAGGTTGCCCTTCAAGGCAAGTGTACCTG...CAGGGCCCTACCCCTGTGGGAAACAGACCCTGGAACGCAGGAAGAGGTCAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410083.6
3UTR-3UTR GCA 90 bp GCTGACGATGCCTGTCACGAAGTAGGTGTCCTTGAAGCGGGTGACGTGCGGGCCAGCTGCTGGACAGCTTaGAGCTGTTGCGGTCCACGT +
Preference number: 2 (lower is better)
Translates to: ADDACHEVGVLEAGDVRASCWTA*SCCGPR
Trigger: ACGTGGACCGCAACAGCTGCAAGCTGTCCAGCAGCT...GGCCCGCACGTCACCCGCTTCAAGGACACCTACTTCGTGACAGGCATCGTCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
3UTR-3UTR CCA 90 bp GTCAAGCAGGTCGAAGGGGTTCTCGGTGGGGTCCAGGTCGGCTGCATCATATGGTGGAGAAATGGAGGCTaGGCTGGCCCAAGGGTGCCA +
Preference number: 2 (lower is better)
Translates to: VKQVEGVLGGVQVGCIIWWRNGG*AGPRVP
Trigger: TGGCACCCTTGGGCCAGCCCAGCCTCCATTTCTCCA...CCATATGATGCAGCCGACCTGGACCCCACCGAGAACCCCTTCGACCTGCTTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410083.6
3UTR-3UTR CCA 90 bp CTGACCTCTTCCTGCGTTCCAGGGTCTGTTTCCCACAGGGGTAGGGCCCTGTGGAAAGGAGAGGCACGTTaGCTCTGGGGACAGCTGGAG +
Preference number: 2 (lower is better)
Translates to: LTSSCVPGSVSHRGRALWKGEAR*LWGQLE
Trigger: CTCCAGCTGTCCCCAGAGCCAACGTGCCTCTCCTTT...CCACAGGGCCCTACCCCTGTGGGAAACAGACCCTGGAACGCAGGAAGAGGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410083.6
3UTR-3UTR CCA 90 bp GAAGTCAAGCAGGTCGAAGGGGTTCTCGGTGGGGTCCAGGTCGGCTGCATCATAAGGGGTAGGGCCCTGTaGGAATGCAGGCCTTGCCGT +
Preference number: 2 (lower is better)
Translates to: EVKQVEGVLGGVQVGCIIRGRAL*ECRPCR
Trigger: ACGGCAAGGCCTGCATTCCCACAGGGCCCTACCCCT...TATGATGCAGCCGACCTGGACCCCACCGAGAACCCCTTCGACCTGCTTGACTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000410083.6
3UTR CAA 90 bp GAGAAATGGAGGCTGGGCTGGCCCAAGGGTGCCAGCTACATCCACTaGCCTGTCAGCCACAAAGCGGCCATTGGGTTGAGCAAAGGGCCA +
Preference number: 2 (lower is better)
Translates to: EKWRLGWPKGASYIH*PVSHKAAIGLSKGP
Trigger: TGGCCCTTTGCTCAACCCAATGGCCGCTTTGTGGCTGACAGGCAAGTGGATGTAGCTGGCACCCTTGGGCCAGCCCAGCCTCCATTTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410083.6
3UTR-3UTR GCA 90 bp CCAAGGGTGCCAGCTACATCCACTTGCCTGTCAGCCACAAAGCGGCCATTGGGTATGGCCGGTACCCCCTaGCCCAGCAGCACTCACATT +
Preference number: 2 (lower is better)
Translates to: PRVPATSTCLSATKRPLGMAGTP*PSSTHI
Trigger: AATGTGAGTGCTGCTGGGGCAGGGGGTACCGGCCAT...ACCCAATGGCCGCTTTGTGGCTGACAGGCAAGTGGATGTAGCTGGCACCCTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410083.6
3UTR-3UTR CCA 90 bp GTCAAGCAGGTCGAAGGGGTTCTCGGTGGGGTCCAGGTCGGCTGCATCATATGGCCACAAAGCGGCCATTaGGTTGAGCAAAGGGCCAGA +
Preference number: 2 (lower is better)
Translates to: VKQVEGVLGGVQVGCIIWPQSGH*VEQRAR
Trigger: TCTGGCCCTTTGCTCAACCCAATGGCCGCTTTGTGG...CCATATGATGCAGCCGACCTGGACCCCACCGAGAACCCCTTCGACCTGCTTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410083.6
3UTR CAA 90 bp ACCACAGAGTTCTGTTCCTCGTGGCAGAACTGGTCACAGTCCCCGTaGTCCAGGCTGCAGAGCTTCCGTGTGACTGCAAAGGAGAGGCAC +
Preference number: 2 (lower is better)
Translates to: TTEFCSSWQNWSQSP*SRLQSFRVTAKERH
Trigger: GTGCCTCTCCTTTGCAGTCACACGGAAGCTCTGCAGCCTGGACAACGGGGACTGTGACCAGTTCTGCCACGAGGAACAGAACTCTGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410083.6
3UTR-3UTR GCA 90 bp TTCTGTTCCTCGTGGCAGAACTGGTCACAGTCCCCGTTGTCCAGGCTGCAGAGCCCAGCTACATCCACTTaGCTGTCAGCCACAAAGCGG +
Preference number: 2 (lower is better)
Translates to: FCSSWQNWSQSPLSRLQSPATST*LSATKR
Trigger: CCGCTTTGTGGCTGACAGGCAAGTGGATGTAGCTGG...GCTCTGCAGCCTGGACAACGGGGACTGTGACCAGTTCTGCCACGAGGAACAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410083.6
3UTR-3UTR TCA 90 bp AGAATGGTTCCACCACAGAAACCCTCGTTTTCCTCATTGATGAGCAGGGCCTGCCTCCCACGATCCTGGTaGGGTTGTTGTCGCCCCTCT +
Preference number: 2 (lower is better)
Translates to: RMVPPQKPSFSSLMSRACLPRSW*GCCRPS
Trigger: AGAGGGGCGACAACAACCTCACCAGGATCGTGGGAG...GCAGGCCCTGCTCATCAATGAGGAAAACGAGGGTTTCTGTGGTGGAACCATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410083.6
3UTR-3UTR CCA 90 bp AGAATGGTTCCACCACAGAAACCCTCGTTTTCCTCATTGATGAGCAGGGCCTGCGGCTCTGGGGACAGCTaGAGAAATGGAGGCTGGGCT +
Preference number: 2 (lower is better)
Translates to: RMVPPQKPSFSSLMSRACGSGDS*RNGGWA
Trigger: AGCCCAGCCTCCATTTCTCCAGCTGTCCCCAGAGCC...GCAGGCCCTGCTCATCAATGAGGAAAACGAGGGTTTCTGTGGTGGAACCATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410083.6
3UTR-3UTR GCA 90 bp AGAATGGTTCCACCACAGAAACCCTCGTTTTCCTCATTGATGAGCAGGGCCTGCTGGGAATGCAGGCCTTaGCGTTGTCAGCCAGGGTGT +
Preference number: 2 (lower is better)
Translates to: RMVPPQKPSFSSLMSRACWECRP*RCQPGC
Trigger: ACACCCTGGCTGACAACGGCAAGGCCTGCATTCCCA...GCAGGCCCTGCTCATCAATGAGGAAAACGAGGGTTTCTGTGGTGGAACCATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410083.6
3UTR-3UTR CCA 90 bp AATGGTTCCACCACAGAAACCCTCGTTTTCCTCATTGATGAGCAGGGCCTGCCAGAGTTCTGTTCCTCGTaGCAGAACTGGTCACAGTCC +
Preference number: 2 (lower is better)
Translates to: NGSTTETLVFLIDEQGLPEFCSS*QNWSQS
Trigger: GGACTGTGACCAGTTCTGCCACGAGGAACAGAACTC...TGGCAGGCCCTGCTCATCAATGAGGAAAACGAGGGTTTCTGTGGTGGAACCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410083.6
3UTR-3UTR GCA 90 bp GGATGTAGAACTCGCTCAGAATGGTTCCACCACAGAAACCCTCGTTTTCCTCATGGCGACAGGTACACTTaGCTTGAAGGGCAACCTCAC +
Preference number: 2 (lower is better)
Translates to: GCRTRSEWFHHRNPRFPHGDRYT*LEGQPH
Trigger: GTGAGGTTGCCCTTCAAGGCAAGTGTACCTGTCGCC...ATGAGGAAAACGAGGGTTTCTGTGGTGGAACCATTCTGAGCGAGTTCTACATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410083.6
3UTR GCA 72 bp TCCCACAGGGGTAGGGCCCTGTGGGAATGCAGGCCTTaGCGTTGTCAGCCAGGGTGTACCCGCGGGCGCAGG +
Preference number: 3 (lower is better)
Translates to: SHRGRALWECRP*RCQPGCTRGRR
Trigger: CCTGCGCCCGCGGGTACACCCTGGCTGACAACGGCAAGGCCTGCATTCCCACAGGGCCCTACCCCTGTGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410083.6
3UTR GCA 72 bp TGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTaGGTCATCAGCGTGGACTCGGCCCAGTCACGCTCG +
Preference number: 3 (lower is better)
Translates to: WVRPKPLTIPVF*VISVDSAQSRS
Trigger: CGAGCGTGACTGGGCCGAGTCCACGCTGATGACGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
3UTR CCA 72 bp AGCCGCTCACAATCCCCGTCTTCTGCGTCATCAGCGTaGACTCGGCCCAGTCACGCTCGGGGAGGCAGGCAG +
Preference number: 3 (lower is better)
Translates to: SRSQSPSSASSA*TRPSHARGGRQ
Trigger: CTGCCTGCCTCCCCGAGCGTGACTGGGCCGAGTCCACGCTGATGACGCAGAAGACGGGGATTGTGAGCGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
3UTR CCA 72 bp ATGCTGTCAGGGGCCTCCCCGCTGCTGCTGGTGGCCTaGGCCACTGACCTCTTCCTGCGTTCCAGGGTCTGT +
Preference number: 3 (lower is better)
Translates to: MLSGASPLLLVA*ATDLFLRSRVC
Trigger: ACAGACCCTGGAACGCAGGAAGAGGTCAGTGGCCCAGGCCACCAGCAGCAGCGGGGAGGCCCCTGACAGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410083.6
3UTR GCA 72 bp CCTGCCCCTCACACCTCCGGGATGGCCGGTACCCCCTaGCCCAGCAGCACTCACATTACGGTCACTCCACAT +
Preference number: 3 (lower is better)
Translates to: PAPHTSGMAGTP*PSSTHITVTPH
Trigger: ATGTGGAGTGACCGTAATGTGAGTGCTGCTGGGGCAGGGGGTACCGGCCATCCCGGAGGTGTGAGGGGCAGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410083.6
3UTR CCA 72 bp AGCATCTTGAGCCTGGTGGACTGCCGGCCCTTCTCGTaGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTC +
Preference number: 3 (lower is better)
Translates to: SILSLVDCRPFS*VRPKPLTIPVF
Trigger: GAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGGGCCGGCAGTCCACCAGGCTCAAGATGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
3UTR CCA 72 bp AGGGCCTGCCAGGGACACTCCCCGTCCTTGCATTCCTaGCCTCCCACGATCCTGGTGAGGTTGTTGTCGCCC +
Preference number: 3 (lower is better)
Translates to: RACQGHSPSLHS*PPTILVRLLSP
Trigger: GGGCGACAACAACCTCACCAGGATCGTGGGAGGCCAGGAATGCAAGGACGGGGAGTGTCCCTGGCAGGCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410083.6
3UTR-3UTR CAA 90 bp GCTGACGATGCCTGTCACGAAGTAGGTGTCCTTGAAGCGGGTGACGTGCGGGCCAAGCTGCTGGACAGCTaGCAGCTGTTGCGGTCCACG +
Preference number: 3 (lower is better)
Translates to: ADDACHEVGVLEAGDVRAKLLDS*QLLRST
Trigger: CGTGGACCGCAACAGCTGCAAGCTGTCCAGCAGCTT...GGCCCGCACGTCACCCGCTTCAAGGACACCTACTTCGTGACAGGCATCGTCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
3UTR TCA 72 bp CAAAGGGCCAGAGCCAGGCGACAGGTACACTTGCCTTaGAGGGCAACCTCACGGGTCACGGGGAGCTCATGG +
Preference number: 3 (lower is better)
Translates to: QRARARRQVHLP*RATSRVTGSSW
Trigger: CCATGAGCTCCCCGTGACCCGTGAGGTTGCCCTTCAAGGCAAGTGTACCTGTCGCCTGGCTCTGGCCCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410083.6
3UTR CCA 72 bp CGGGCGCAGGAGCACACCACAGAGTTCTGTTCCTCGTaGCAGAACTGGTCACAGTCCCCGTTGTCCAGGCTG +
Preference number: 3 (lower is better)
Translates to: RAQEHTTEFCSS*QNWSQSPLSRL
Trigger: CAGCCTGGACAACGGGGACTGTGACCAGTTCTGCCACGAGGAACAGAACTCTGTGGTGTGCTCCTGCGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410083.6
3UTR GCA 72 bp TTGAGCAAAGGGCCAGAGCCAGGCGACAGGTACACTTaGCTTGAAGGGCAACCTCACGGGTCACGGGGAGCT +
Preference number: 3 (lower is better)
Translates to: LSKGPEPGDRYT*LEGQPHGSRGA
Trigger: AGCTCCCCGTGACCCGTGAGGTTGCCCTTCAAGGCAAGTGTACCTGTCGCCTGGCTCTGGCCCTTTGCTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410083.6
3UTR CCA 72 bp CTGGTGAGGTTGTTGTCGCCCCTCTCAGGCTGCGTCTaGTTGAAGTCAAGCAGGTCGAAGGGGTTCTCGGTG +
Preference number: 3 (lower is better)
Translates to: LVRLLSPLSGCV*LKSSRSKGFSV
Trigger: CACCGAGAACCCCTTCGACCTGCTTGACTTCAACCAGACGCAGCCTGAGAGGGGCGACAACAACCTCACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410083.6
3UTR-3UTR CAA 90 bp TTCTGTTCCTCGTGGCAGAACTGGTCACAGTCCCCGTTGTCCAGGCTGCAGAGCAAAGCGGCCATTGGGTaGAGCAAAGGGCCAGAGCCA +
Preference number: 3 (lower is better)
Translates to: FCSSWQNWSQSPLSRLQSKAAIG*SKGPEP
Trigger: TGGCTCTGGCCCTTTGCTCAACCCAATGGCCGCTTT...GCTCTGCAGCCTGGACAACGGGGACTGTGACCAGTTCTGCCACGAGGAACAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410083.6
3UTR-3UTR CAA 90 bp GAAGTCAAGCAGGTCGAAGGGGTTCTCGGTGGGGTCCAGGTCGGCTGCATCATAGCCAGCTACATCCACTaGCCTGTCAGCCACAAAGCG +
Preference number: 3 (lower is better)
Translates to: EVKQVEGVLGGVQVGCIIASYIH*PVSHKA
Trigger: CGCTTTGTGGCTGACAGGCAAGTGGATGTAGCTGGC...TATGATGCAGCCGACCTGGACCCCACCGAGAACCCCTTCGACCTGCTTGACTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410083.6
3UTR-3UTR CAA 90 bp AAGTCAAGCAGGTCGAAGGGGTTCTCGGTGGGGTCCAGGTCGGCTGCATCATATTGGTCACAGTCCCCGTaGTCCAGGCTGCAGAGCTTC +
Preference number: 3 (lower is better)
Translates to: KSSRSKGFSVGSRSAASYWSQSP*SRLQSF
Trigger: GAAGCTCTGCAGCCTGGACAACGGGGACTGTGACCA...ATATGATGCAGCCGACCTGGACCCCACCGAGAACCCCTTCGACCTGCTTGACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000410083.6
3UTR-3UTR CAA 90 bp AGAATGGTTCCACCACAGAAACCCTCGTTTTCCTCATTGATGAGCAGGGCCTGCGGACACTCCCCGTCCTaGCATTCCTGGCCTCCCACG +
Preference number: 3 (lower is better)
Translates to: RMVPPQKPSFSSLMSRACGHSPS*HSWPPT
Trigger: CGTGGGAGGCCAGGAATGCAAGGACGGGGAGTGTCC...GCAGGCCCTGCTCATCAATGAGGAAAACGAGGGTTTCTGTGGTGGAACCATTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410083.6
3UTR GCA 72 bp ACGATCCTGGTGAGGTTGTTGTCGCCCCTCTCAGGCTaGGTCTGGTTGAAGTCAAGCAGGTCGAAGGGGTTC +
Preference number: 3 (lower is better)
Translates to: TILVRLLSPLSG*VWLKSSRSKGF
Trigger: GAACCCCTTCGACCTGCTTGACTTCAACCAGACGCAGCCTGAGAGGGGCGACAACAACCTCACCAGGATCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410083.6
3UTR CCA 72 bp CTACATCCACTTGCCTGTCAGCCACAAAGCGGCCATTaGGTTGAGCAAAGGGCCAGAGCCAGGCGACAGGTA +
Preference number: 3 (lower is better)
Translates to: LHPLACQPQSGH*VEQRARARRQV
Trigger: TACCTGTCGCCTGGCTCTGGCCCTTTGCTCAACCCAATGGCCGCTTTGTGGCTGACAGGCAAGTGGATGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410083.6
3UTR CCA 72 bp GAGCACACCACAGAGTTCTGTTCCTCGTGGCAGAACTaGTCACAGTCCCCGTTGTCCAGGCTGCAGAGCTTC +
Preference number: 3 (lower is better)
Translates to: EHTTEFCSSWQN*SQSPLSRLQSF
Trigger: GAAGCTCTGCAGCCTGGACAACGGGGACTGTGACCAGTTCTGCCACGAGGAACAGAACTCTGTGGTGTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410083.6
3UTR-3UTR CAA 90 bp ATGGTTCCACCACAGAAACCCTCGTTTTCCTCATTGATGAGCAGGGCCTGCCAGATCCTGGTGAGGTTGTaGTCGCCCCTCTCAGGCTGC +
Preference number: 3 (lower is better)
Translates to: MVPPQKPSFSSLMSRACQILVRL*SPLSGC
Trigger: GCAGCCTGAGAGGGGCGACAACAACCTCACCAGGAT...CTGGCAGGCCCTGCTCATCAATGAGGAAAACGAGGGTTTCTGTGGTGGAACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410083.6
CDS-3UTR CCA 90 bp GTCATCAGCGTGGACTCGGCCCAGTCACGCTCGGGGAGGCAGGCAGGCGCCACGTGCCGGCCCTTCTCGTaGGTGCGCCCGAAGCCGCTC +
Preference number: 4 (lower is better)
Translates to: VISVDSAQSRSGRQAGATCRPFS*VRPKPL
Trigger: GAGCGGCTTCGGGCGCACCCACGAGAAGGGCCGGCA...CGTGGCGCCTGCCTGCCTCCCCGAGCGTGACTGGGCCGAGTCCACGCTGATGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CCA 90 bp GACTGCCGGCCCTTCTCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCCGGCCCTTCTCGTaGGTGCGCCCGAAGCCGCTC +
Preference number: 4 (lower is better)
Translates to: DCRPFSWVRPKPLTIPVFCRPFS*VRPKPL
Trigger: GAGCGGCTTCGGGCGCACCCACGAGAAGGGCCGGCA...GAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGGGCCGGCAGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR GCA 90 bp CTCCAGCATCTTGAGCCTGGTGGACTGCCGGCCCTTCTCGTGGGTGCGCCCGAATTGAAGCGGGTGACGTaGGGGCCCCCGCTGTCCCCC +
Preference number: 4 (lower is better)
Translates to: LQHLEPGGLPALLVGAPELKRVT*GPPLSP
Trigger: GGGGGACAGCGGGGGCCCGCACGTCACCCGCTTCAA...TTCGGGCGCACCCACGAGAAGGGCCGGCAGTCCACCAGGCTCAAGATGCTGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CCA 90 bp GTCATCAGCGTGGACTCGGCCCAGTCACGCTCGGGGAGGCAGGCAGGCGCCACGAGGGGTAGGGCCCTGTaGGAATGCAGGCCTTGCCGT +
Preference number: 4 (lower is better)
Translates to: VISVDSAQSRSGRQAGATRGRAL*ECRPCR
Trigger: ACGGCAAGGCCTGCATTCCCACAGGGCCCTACCCCT...CGTGGCGCCTGCCTGCCTCCCCGAGCGTGACTGGGCCGAGTCCACGCTGATGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CCA 90 bp CCGGCCCTTCTCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGTCCCCGCTGCTGCTGGTaGCCTGGGCCACTGACCTCT +
Preference number: 4 (lower is better)
Translates to: PALLVGAPEAAHNPRLLRPRCCW*PGPLTS
Trigger: AGAGGTCAGTGGCCCAGGCCACCAGCAGCAGCGGGG...ACGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGGGCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR TCA 90 bp CGGCCCTTCTCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGTCCAGCCAGGGAGGCACTaGGCAGGACGAGGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: RPFSWVRPKPLTIPVFCVQPGRH*AGRGAV
Trigger: CACTGCACCTCGTCCTGCTCAGTGCCTCCCTGGCTG...GACGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGGGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR GCA 90 bp GACTGCCGGCCCTTCTCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCCTGAGCAGGACGAGGTaGAGTGGGCGCCCCATGGTG +
Preference number: 4 (lower is better)
Translates to: DCRPFSWVRPKPLTIPVFLSRTR*SGRPMV
Trigger: CACCATGGGGCGCCCACTGCACCTCGTCCTGCTCAG...GAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGGGCCGGCAGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR GCA 90 bp GACTGCCGGCCCTTCTCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCGGCCCTTCTCGTGGGTaGGCCCGAAGCCGCTCACAA +
Preference number: 4 (lower is better)
Translates to: DCRPFSWVRPKPLTIPVFGPSRG*ARSRSQ
Trigger: TTGTGAGCGGCTTCGGGCGCACCCACGAGAAGGGCC...GAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGGGCCGGCAGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR GCA 90 bp GCCGGCCCTTCTCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGTTGAGCCTGGTGGACTaGCGGCCCTTCTCGTGGGTG +
Preference number: 4 (lower is better)
Translates to: AGPSRGCARSRSQSPSSALSLVD*RPFSWV
Trigger: CACCCACGAGAAGGGCCGGCAGTCCACCAGGCTCAA...CGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGGGCCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR GCA 90 bp CCCTTCTCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGTCATCTTGAAGCGGGTGACGTaGGGGCCCCCGCTGTCCCCC +
Preference number: 4 (lower is better)
Translates to: PFSWVRPKPLTIPVFCVILKRVT*GPPLSP
Trigger: GGGGGACAGCGGGGGCCCGCACGTCACCCGCTTCAA...GATGACGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CCA 90 bp GACTGCCGGCCCTTCTCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCGGGCGCCCCATGGTGTaGCCGAGTACTGTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: DCRPFSWVRPKPLTIPVFGRPMV*PSTVSL
Trigger: CAGGGACACAGTACTCGGCCACACCATGGGGCGCCC...GAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGGGCCGGCAGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CCA 90 bp GCCGGCCCTTCTCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGCTGCTGCTGGTGGCCTaGGCCACTGACCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: AGPSRGCARSRSQSPSSALLLVA*ATDLFL
Trigger: CAGGAAGAGGTCAGTGGCCCAGGCCACCAGCAGCAG...CGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGGGCCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CCA 90 bp GTCATCAGCGTGGACTCGGCCCAGTCACGCTCGGGGAGGCAGGCAGGCGCCACGCCGTCCTTGCATTCCTaGCCTCCCACGATCCTGGTG +
Preference number: 4 (lower is better)
Translates to: VISVDSAQSRSGRQAGATPSLHS*PPTILV
Trigger: CACCAGGATCGTGGGAGGCCAGGAATGCAAGGACGG...CGTGGCGCCTGCCTGCCTCCCCGAGCGTGACTGGGCCGAGTCCACGCTGATGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CCA 90 bp GTCATCAGCGTGGACTCGGCCCAGTCACGCTCGGGGAGGCAGGCAGGCGCCACGATGACCTCCGGGGCATaGCTCTTGGCCTTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: VISVDSAQSRSGRQAGATMTSGA*LLALGK
Trigger: CTTGCCCAAGGCCAAGAGCCATGCCCCGGAGGTCAT...CGTGGCGCCTGCCTGCCTCCCCGAGCGTGACTGGGCCGAGTCCACGCTGATGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375551.7
CDS-3UTR TCA 90 bp CGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGTCATCAGCGTGGACTCGGCCCAGCCAGGGAGGCACTaGGCAGGACGAGGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: RPKPLTIPVFCVISVDSAQPGRH*AGRGAV
Trigger: CACTGCACCTCGTCCTGCTCAGTGCCTCCCTGGCTG...GGCCGAGTCCACGCTGATGACGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR GCA 90 bp GTCATCAGCGTGGACTCGGCCCAGTCACGCTCGGGGAGGCAGGCAGGCGCCACGTGGGAATGCAGGCCTTaGCGTTGTCAGCCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: VISVDSAQSRSGRQAGATWECRP*RCQPGC
Trigger: ACACCCTGGCTGACAACGGCAAGGCCTGCATTCCCA...CGTGGCGCCTGCCTGCCTCCCCGAGCGTGACTGGGCCGAGTCCACGCTGATGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CCA 90 bp CGGCCCTTCTCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGTCGCAGTGGGCGCCCCATaGTGTGGCCGAGTACTGTGT +
Preference number: 4 (lower is better)
Translates to: RPFSWVRPKPLTIPVFCVAVGAP*CGRVLC
Trigger: ACACAGTACTCGGCCACACCATGGGGCGCCCACTGC...GACGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGGGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CCA 90 bp CCCTTCTCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGTCATCCAGGACGAGGTGCAGTaGGCGCCCCATGGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: PFSWVRPKPLTIPVFCVIQDEVQ*APHGVA
Trigger: GGCCACACCATGGGGCGCCCACTGCACCTCGTCCTG...GATGACGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CCA 90 bp GACTGCCGGCCCTTCTCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCAGGGGTAGGGCCCTGTaGGAATGCAGGCCTTGCCGT +
Preference number: 4 (lower is better)
Translates to: DCRPFSWVRPKPLTIPVFRGRAL*ECRPCR
Trigger: ACGGCAAGGCCTGCATTCCCACAGGGCCCTACCCCT...GAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGGGCCGGCAGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR TCA 90 bp CCGTTGTCAGCCAGGGTGTACCCGCGGGCGCAGGAGCACACCACAGAGTTCTGTCAGCCAGGGAGGCACTaGGCAGGACGAGGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: PLSARVYPRAQEHTTEFCQPGRH*AGRGAV
Trigger: CACTGCACCTCGTCCTGCTCAGTGCCTCCCTGGCTG...ACAGAACTCTGTGGTGTGCTCCTGCGCCCGCGGGTACACCCTGGCTGACAACGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410083.6
CDS-3UTR TCA 90 bp CTTGAGCCTGGTGGACTGCCGGCCCTTCTCGTGGGTGCGCCCGAAGCCGCTCACCAGGCTGCGTCTGGTTaGAGTCAAGCAGGTCGAAGG +
Preference number: 4 (lower is better)
Translates to: LEPGGLPALLVGAPEAAHQAASG*SQAGRR
Trigger: CCTTCGACCTGCTTGACTTCAACCAGACGCAGCCTG...GTGAGCGGCTTCGGGCGCACCCACGAGAAGGGCCGGCAGTCCACCAGGCTCAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR TCA 90 bp GCCGGCCCTTCTCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGATGGAGAGGACGTTATaGCCTCCGGGGCATGGCTCT +
Preference number: 4 (lower is better)
Translates to: AGPSRGCARSRSQSPSSAMERTL*PPGHGS
Trigger: AGAGCCATGCCCCGGAGGTCATAACGTCCTCTCCAT...CGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGGGCCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375551.7
CDS-3UTR GCA 90 bp CCCTTCTCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGTCATCCTGAGCAGGACGAGGTaGAGTGGGCGCCCCATGGTG +
Preference number: 4 (lower is better)
Translates to: PFSWVRPKPLTIPVFCVILSRTR*SGRPMV
Trigger: CACCATGGGGCGCCCACTGCACCTCGTCCTGCTCAG...GATGACGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR GCA 90 bp GACTGCCGGCCCTTCTCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCAGGGCCCTGTGGGAATaGAGGCCTTGCCGTTGTCAG +
Preference number: 4 (lower is better)
Translates to: DCRPFSWVRPKPLTIPVFRALWE*RPCRCQ
Trigger: CTGACAACGGCAAGGCCTGCATTCCCACAGGGCCCT...GAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGGGCCGGCAGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR GCA 90 bp GCCCTTCTCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGTCATGGCCCTTCTCGTGGGTaGGCCCGAAGCCGCTCACAA +
Preference number: 4 (lower is better)
Translates to: ALLVGAPEAAHNPRLLRHGPSRG*ARSRSQ
Trigger: TTGTGAGCGGCTTCGGGCGCACCCACGAGAAGGGCC...ATGACGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR GCA 90 bp GCCGGCCCTTCTCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGACAGCTTGCAGCTGTTaGGGTCCACGTAGGGCACCT +
Preference number: 4 (lower is better)
Translates to: AGPSRGCARSRSQSPSSATACSC*GPRRAP
Trigger: AGGTGCCCTACGTGGACCGCAACAGCTGCAAGCTGT...CGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGGGCCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR GCA 90 bp GCCGGCCCTTCTCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGAGCTGCTGGACAGCTTaGAGCTGTTGCGGTCCACGT +
Preference number: 4 (lower is better)
Translates to: AGPSRGCARSRSQSPSSASCWTA*SCCGPR
Trigger: ACGTGGACCGCAACAGCTGCAAGCTGTCCAGCAGCT...CGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGGGCCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CCA 90 bp GTCATCAGCGTGGACTCGGCCCAGTCACGCTCGGGGAGGCAGGCAGGCGCCACGCTCTCAGGCTGCGTCTaGTTGAAGTCAAGCAGGTCG +
Preference number: 4 (lower is better)
Translates to: VISVDSAQSRSGRQAGATLSGCV*LKSSRS
Trigger: CGACCTGCTTGACTTCAACCAGACGCAGCCTGAGAG...CGTGGCGCCTGCCTGCCTCCCCGAGCGTGACTGGGCCGAGTCCACGCTGATGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CCA 90 bp GACTGCCGGCCCTTCTCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCCCGTCCTTGCATTCCTaGCCTCCCACGATCCTGGTG +
Preference number: 4 (lower is better)
Translates to: DCRPFSWVRPKPLTIPVFPSLHS*PPTILV
Trigger: CACCAGGATCGTGGGAGGCCAGGAATGCAAGGACGG...GAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGGGCCGGCAGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR TCA 90 bp CGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGTCATCAGCGTGGACTCGGCCAGCCCTCTCCCCAGCTaGCGATGCCTGTCACGAAGT +
Preference number: 4 (lower is better)
Translates to: RPKPLTIPVFCVISVDSASPLPS*RCLSRS
Trigger: ACTTCGTGACAGGCATCGTCAGCTGGGGAGAGGGCT...GGCCGAGTCCACGCTGATGACGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR GCA 90 bp TCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGTCATCAGCGTGTTGATGAGCAGGGCCTaGCAGGGACACTCCCCGTCC +
Preference number: 4 (lower is better)
Translates to: SWVRPKPLTIPVFCVISVLMSRA*QGHSPS
Trigger: GGACGGGGAGTGTCCCTGGCAGGCCCTGCTCATCAA...CACGCTGATGACGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CCA 90 bp GGCGGTGACCTTGGTGTAGATCCCGTACTTCCCCTTACGGGCACAGCCCTCTCCGGGCGCCCCATGGTGTaGCCGAGTACTGTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: GGDLGVDPVLPLTGTALSGRPMV*PSTVSL
Trigger: CAGGGACACAGTACTCGGCCACACCATGGGGCGCCC...GGAGAGGGCTGTGCCCGTAAGGGGAAGTACGGGATCTACACCAAGGTCACCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CCA 90 bp TCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGTCATCAGCGTGGCAGTGGGCGCCCCATaGTGTGGCCGAGTACTGTGT +
Preference number: 4 (lower is better)
Translates to: SWVRPKPLTIPVFCVISVAVGAP*CGRVLC
Trigger: ACACAGTACTCGGCCACACCATGGGGCGCCCACTGC...CACGCTGATGACGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CCA 90 bp GACTGCCGGCCCTTCTCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTCCTCGTGGCAGAACTaGTCACAGTCCCCGTTGTCC +
Preference number: 4 (lower is better)
Translates to: DCRPFSWVRPKPLTIPVFSSWQN*SQSPLS
Trigger: GGACAACGGGGACTGTGACCAGTTCTGCCACGAGGA...GAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGGGCCGGCAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CCA 90 bp GCCCTTCTCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGTCATCTGCTGCTGGTGGCCTaGGCCACTGACCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: ALLVGAPEAAHNPRLLRHLLLVA*ATDLFL
Trigger: CAGGAAGAGGTCAGTGGCCCAGGCCACCAGCAGCAG...ATGACGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CCA 90 bp TCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGTCATCAGCGTGCGAAGGGGTTCTCGGTaGGGTCCAGGTCGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: SWVRPKPLTIPVFCVISVRRGSR*GPGRLH
Trigger: ATGCAGCCGACCTGGACCCCACCGAGAACCCCTTCG...CACGCTGATGACGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CCA 90 bp CTCCAGCATCTTGAGCCTGGTGGACTGCCGGCCCTTCTCGTGGGTGCGCCCGAATCTGCGTCATCAGCGTaGACTCGGCCCAGTCACGCT +
Preference number: 4 (lower is better)
Translates to: LQHLEPGGLPALLVGAPESASSA*TRPSHA
Trigger: AGCGTGACTGGGCCGAGTCCACGCTGATGACGCAGA...TTCGGGCGCACCCACGAGAAGGGCCGGCAGTCCACCAGGCTCAAGATGCTGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CCA 90 bp CGGCCCTTCTCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGTCAGGCATCCTCCTGCTTaGTGTCGTAGCCGGCACAGA +
Preference number: 4 (lower is better)
Translates to: RPFSWVRPKPLTIPVFCVRHPPA*CRSRHR
Trigger: TCTGTGCCGGCTACGACACCAAGCAGGAGGATGCCT...GACGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CCA 90 bp GACTGCCGGCCCTTCTCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCAGGCATCCTCCTGCTTaGTGTCGTAGCCGGCACAGA +
Preference number: 4 (lower is better)
Translates to: DCRPFSWVRPKPLTIPVFRHPPA*CRSRHR
Trigger: TCTGTGCCGGCTACGACACCAAGCAGGAGGATGCCT...GAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGGGCCGGCAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CCA 90 bp GTCAAGCAGGTCGAAGGGGTTCTCGGTGGGGTCCAGGTCGGCTGCATCATATGGCTCACACCTCCGGGATaGCCGGTACCCCCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: VKQVEGVLGGVQVGCIIWLTPPG*PVPPAP
Trigger: TGGGGCAGGGGGTACCGGCCATCCCGGAGGTGTGAG...CCATATGATGCAGCCGACCTGGACCCCACCGAGAACCCCTTCGACCTGCTTGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000410083.6
CDS-3UTR TCA 90 bp GGGTCACGGGGAGCTCATGGTGCAGTGCCCGGTGTAGCCAGAAGCCAGGCTCCAGCGGGCCTCTTCGTATaGGCAGGTCTCTTCCATGCA +
Preference number: 4 (lower is better)
Translates to: GSRGAHGAVPGVARSQAPAGLFV*AGLFHA
Trigger: TGCATGGAAGAGACCTGCTCATACGAAGAGGCCCGC...TGGAGCCTGGCTTCTGGCTACACCGGGCACTGCACCATGAGCTCCCCGTGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410083.6
CDS-3UTR TCA 90 bp GCCCTTCTCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGTCATCTCCCACGATCCTGGTaGGGTTGTTGTCGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: ALLVGAPEAAHNPRLLRHLPRSW*GCCRPS
Trigger: AGAGGGGCGACAACAACCTCACCAGGATCGTGGGAG...ATGACGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR TCA 90 bp TCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGTCATCAGCGTGCTCCCACGATCCTGGTaGGGTTGTTGTCGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: SWVRPKPLTIPVFCVISVLPRSW*GCCRPS
Trigger: AGAGGGGCGACAACAACCTCACCAGGATCGTGGGAG...CACGCTGATGACGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR GCA 90 bp GCCCTTCTCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGTCATAGGGCCCTGTGGGAATaGAGGCCTTGCCGTTGTCAG +
Preference number: 4 (lower is better)
Translates to: ALLVGAPEAAHNPRLLRHRALWE*RPCRCQ
Trigger: CTGACAACGGCAAGGCCTGCATTCCCACAGGGCCCT...ATGACGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR GCA 90 bp TGCCGTTGTCAGCCAGGGTGTACCCGCGGGCGCAGGAGCACACCACAGAGTTCTAGGGCCCTGTGGGAATaGAGGCCTTGCCGTTGTCAG +
Preference number: 4 (lower is better)
Translates to: CRCQPGCTRGRRSTPQSSRALWE*RPCRCQ
Trigger: CTGACAACGGCAAGGCCTGCATTCCCACAGGGCCCT...AGAACTCTGTGGTGTGCTCCTGCGCCCGCGGGTACACCCTGGCTGACAACGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410083.6
CDS-3UTR GCA 90 bp CCTTCTCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGTCATCATTGATGAGCAGGGCCTaGCAGGGACACTCCCCGTCC +
Preference number: 4 (lower is better)
Translates to: PSRGCARSRSQSPSSASSLMSRA*QGHSPS
Trigger: GGACGGGGAGTGTCCCTGGCAGGCCCTGCTCATCAA...TGATGACGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CCA 90 bp GTCATCAGCGTGGACTCGGCCCAGTCACGCTCGGGGAGGCAGGCAGGCGCCACGGTCGGCTGCATCATATaGCTTCCATGTGATGCTGTC +
Preference number: 4 (lower is better)
Translates to: VISVDSAQSRSGRQAGATVGCII*LPCDAV
Trigger: GACAGCATCACATGGAAGCCATATGATGCAGCCGAC...CGTGGCGCCTGCCTGCCTCCCCGAGCGTGACTGGGCCGAGTCCACGCTGATGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CCA 90 bp GGCGGTGACCTTGGTGTAGATCCCGTACTTCCCCTTACGGGCACAGCCCTCTCCCGAAGGGGTTCTCGGTaGGGTCCAGGTCGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: GGDLGVDPVLPLTGTALSRRGSR*GPGRLH
Trigger: ATGCAGCCGACCTGGACCCCACCGAGAACCCCTTCG...GGAGAGGGCTGTGCCCGTAAGGGGAAGTACGGGATCTACACCAAGGTCACCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CCA 90 bp CCACTGACCTCTTCCTGCGTTCCAGGGTCTGTTTCCCACAGGGGTAGGGCCCTGCGAAGGGGTTCTCGGTaGGGTCCAGGTCGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: PLTSSCVPGSVSHRGRALRRGSR*GPGRLH
Trigger: ATGCAGCCGACCTGGACCCCACCGAGAACCCCTTCG...CAGGGCCCTACCCCTGTGGGAAACAGACCCTGGAACGCAGGAAGAGGTCAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410083.6
CDS-3UTR CCA 90 bp CCGGCCCTTCTCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGTCTCTCAGGCTGCGTCTaGTTGAAGTCAAGCAGGTCG +
Preference number: 4 (lower is better)
Translates to: PALLVGAPEAAHNPRLLRLSGCV*LKSSRS
Trigger: CGACCTGCTTGACTTCAACCAGACGCAGCCTGAGAG...ACGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGGGCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CCA 90 bp GACTGCCGGCCCTTCTCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCCATGGCTCTTGGCCTTaGGCAAGCCCCTGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: DCRPFSWVRPKPLTIPVFHGSWP*ASPWFS
Trigger: TGAAAACCAGGGGCTTGCCCAAGGCCAAGAGCCATG...GAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGGGCCGGCAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375551.7
CDS-3UTR CCA 90 bp TGCCGTTGTCAGCCAGGGTGTACCCGCGGGCGCAGGAGCACACCACAGAGTTCTAAATGGAGGCTGGGCTaGCCCAAGGGTGCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: CRCQPGCTRGRRSTPQSSKWRLG*PKGASY
Trigger: GTAGCTGGCACCCTTGGGCCAGCCCAGCCTCCATTT...AGAACTCTGTGGTGTGCTCCTGCGCCCGCGGGTACACCCTGGCTGACAACGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410083.6
CDS-3UTR TCA 90 bp TCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGTCATCAGCGTGCAGGCTGCGTCTGGTTaGAGTCAAGCAGGTCGAAGG +
Preference number: 4 (lower is better)
Translates to: SWVRPKPLTIPVFCVISVQAASG*SQAGRR
Trigger: CCTTCGACCTGCTTGACTTCAACCAGACGCAGCCTG...CACGCTGATGACGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR TCA 90 bp TGCCGTTGTCAGCCAGGGTGTACCCGCGGGCGCAGGAGCACACCACAGAGTTCTCAGGCTGCGTCTGGTTaGAGTCAAGCAGGTCGAAGG +
Preference number: 4 (lower is better)
Translates to: CRCQPGCTRGRRSTPQSSQAASG*SQAGRR
Trigger: CCTTCGACCTGCTTGACTTCAACCAGACGCAGCCTG...AGAACTCTGTGGTGTGCTCCTGCGCCCGCGGGTACACCCTGGCTGACAACGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410083.6
CDS-3UTR GCA 90 bp GGGTTGAGCAAAGGGCCAGAGCCAGGCGACAGGTACACTTGCCTTGAAGGGCAACTGAGCAGGACGAGGTaGAGTGGGCGCCCCATGGTG +
Preference number: 4 (lower is better)
Translates to: GLSKGPEPGDRYTCLEGQLSRTR*SGRPMV
Trigger: CACCATGGGGCGCCCACTGCACCTCGTCCTGCTCAG...TTGCCCTTCAAGGCAAGTGTACCTGTCGCCTGGCTCTGGCCCTTTGCTCAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410083.6
CDS-3UTR GCA 90 bp CCGGCCCTTCTCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGTGGCCGTCTTTACATTTaGCCTGGTTCTGGCAAGGAC +
Preference number: 4 (lower is better)
Translates to: PALLVGAPEAAHNPRLLRGRLYI*PGSGKD
Trigger: GTCCTTGCCAGAACCAGGGCAAATGTAAAGACGGCC...ACGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGGGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR GCA 90 bp TGCCGTTGTCAGCCAGGGTGTACCCGCGGGCGCAGGAGCACACCACAGAGTTCTTGGGAATGCAGGCCTTaGCGTTGTCAGCCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: CRCQPGCTRGRRSTPQSSWECRP*RCQPGC
Trigger: ACACCCTGGCTGACAACGGCAAGGCCTGCATTCCCA...AGAACTCTGTGGTGTGCTCCTGCGCCCGCGGGTACACCCTGGCTGACAACGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410083.6
CDS-3UTR GCA 90 bp GCCCTTCTCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGTCATTCGCCCCTCTCAGGCTaGGTCTGGTTGAAGTCAAGC +
Preference number: 4 (lower is better)
Translates to: ALLVGAPEAAHNPRLLRHSPLSG*VWLKSS
Trigger: GCTTGACTTCAACCAGACGCAGCCTGAGAGGGGCGA...ATGACGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR GCA 90 bp GCCCTTCTCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGTCATAGCTGCTGGACAGCTTaGAGCTGTTGCGGTCCACGT +
Preference number: 4 (lower is better)
Translates to: ALLVGAPEAAHNPRLLRHSCWTA*SCCGPR
Trigger: ACGTGGACCGCAACAGCTGCAAGCTGTCCAGCAGCT...ATGACGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR GCA 90 bp GAATGCAGGCCTTGCCGTTGTCAGCCAGGGTGTACCCGCGGGCGCAGGAGCACACCAGCTACATCCACTTaGCTGTCAGCCACAAAGCGG +
Preference number: 4 (lower is better)
Translates to: ECRPCRCQPGCTRGRRSTPATST*LSATKR
Trigger: CCGCTTTGTGGCTGACAGGCAAGTGGATGTAGCTGG...TGTGCTCCTGCGCCCGCGGGTACACCCTGGCTGACAACGGCAAGGCCTGCATTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410083.6
CDS-3UTR CCA 90 bp CTCCAGCATCTTGAGCCTGGTGGACTGCCGGCCCTTCTCGTGGGTGCGCCCGAAGGTTCTGGCAAGGACTaGTCTCACACTGGTCGCCAT +
Preference number: 4 (lower is better)
Translates to: LQHLEPGGLPALLVGAPEGSGKD*SHTGRH
Trigger: ATGGCGACCAGTGTGAGACCAGTCCTTGCCAGAACC...TTCGGGCGCACCCACGAGAAGGGCCGGCAGTCCACCAGGCTCAAGATGCTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CCA 90 bp GACTGCCGGCCCTTCTCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCCATTTGCCCTGGTTCTaGCAAGGACTGGTCTCACAC +
Preference number: 4 (lower is better)
Translates to: DCRPFSWVRPKPLTIPVFHLPWF*QGLVSH
Trigger: GTGTGAGACCAGTCCTTGCCAGAACCAGGGCAAATG...GAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGGGCCGGCAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CCA 90 bp GACTGCCGGCCCTTCTCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCGAGTTCTGTTCCTCGTaGCAGAACTGGTCACAGTCC +
Preference number: 4 (lower is better)
Translates to: DCRPFSWVRPKPLTIPVFEFCSS*QNWSQS
Trigger: GGACTGTGACCAGTTCTGCCACGAGGAACAGAACTC...GAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGGGCCGGCAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CCA 90 bp CCTTCTCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGTCATCATCTGCGTCATCAGCGTaGACTCGGCCCAGTCACGCT +
Preference number: 4 (lower is better)
Translates to: PSRGCARSRSQSPSSASSSASSA*TRPSHA
Trigger: AGCGTGACTGGGCCGAGTCCACGCTGATGACGCAGA...TGATGACGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CCA 90 bp CGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGTCATCAGCGTGGACTCGGCCCCTTGGGCAAGCCCCTaGTTTTCATGGACCTGTCGA +
Preference number: 4 (lower is better)
Translates to: RPKPLTIPVFCVISVDSAPWASP*FSWTCR
Trigger: TCGACAGGTCCATGAAAACCAGGGGCTTGCCCAAGG...GGCCGAGTCCACGCTGATGACGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000375551.7
CDS-3UTR CCA 90 bp TCAAGCAGGTCGAAGGGGTTCTCGGTGGGGTCCAGGTCGGCTGCATCATATGGCGTCACGGGGAGCTCATaGTGCAGTGCCCGGTGTAGC +
Preference number: 4 (lower is better)
Translates to: SSRSKGFSVGSRSAASYGVTGSS*CSARCS
Trigger: GCTACACCGGGCACTGCACCATGAGCTCCCCGTGAC...GCCATATGATGCAGCCGACCTGGACCCCACCGAGAACCCCTTCGACCTGCTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000410083.6
3UTR CAA 72 bp GCAAAGGGCCAGAGCCAGGCGACAGGTACACTTGCCTaGAAGGGCAACCTCACGGGTCACGGGGAGCTCATG +
Preference number: 4 (lower is better)
Translates to: AKGQSQATGTLA*KGNLTGHGELM
Trigger: CATGAGCTCCCCGTGACCCGTGAGGTTGCCCTTCAAGGCAAGTGTACCTGTCGCCTGGCTCTGGCCCTTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410083.6
3UTR CAA 72 bp TTGATGAGCAGGGCCTGCCAGGGACACTCCCCGTCCTaGCATTCCTGGCCTCCCACGATCCTGGTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: LMSRACQGHSPS*HSWPPTILVRL
Trigger: CAACCTCACCAGGATCGTGGGAGGCCAGGAATGCAAGGACGGGGAGTGTCCCTGGCAGGCCCTGCTCATCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410083.6
CDS-3UTR TCA 90 bp GGCGGTGACCTTGGTGTAGATCCCGTACTTCCCCTTACGGGCACAGCCCTCTCCGCGGGCCTCTTCGTATaGGCAGGTCTCTTCCATGCA +
Preference number: 4 (lower is better)
Translates to: GGDLGVDPVLPLTGTALSAGLFV*AGLFHA
Trigger: TGCATGGAAGAGACCTGCTCATACGAAGAGGCCCGC...GGAGAGGGCTGTGCCCGTAAGGGGAAGTACGGGATCTACACCAAGGTCACCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR TCA 90 bp GGCGGTGACCTTGGTGTAGATCCCGTACTTCCCCTTACGGGCACAGCCCTCTCCCATATGGCTTCCATGTaGTGCTGTCAGGGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: GGDLGVDPVLPLTGTALSHMASM*CCQGPP
Trigger: GGGAGGCCCCTGACAGCATCACATGGAAGCCATATG...GGAGAGGGCTGTGCCCGTAAGGGGAAGTACGGGATCTACACCAAGGTCACCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR TCA 90 bp TGCTGCTGGTGGCCTGGGCCACTGACCTCTTCCTGCGTTCCAGGGTCTGTTTCCCAGGTACACTTGCCTTaGAGGGCAACCTCACGGGTC +
Preference number: 4 (lower is better)
Translates to: CCWWPGPLTSSCVPGSVSQVHLP*RATSRV
Trigger: GACCCGTGAGGTTGCCCTTCAAGGCAAGTGTACCTG...GGAAACAGACCCTGGAACGCAGGAAGAGGTCAGTGGCCCAGGCCACCAGCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410083.6
CDS-3UTR GCA 90 bp GGCGGTGACCTTGGTGTAGATCCCGTACTTCCCCTTACGGGCACAGCCCTCTCCTGGGAATGCAGGCCTTaGCGTTGTCAGCCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: GGDLGVDPVLPLTGTALSWECRP*RCQPGC
Trigger: ACACCCTGGCTGACAACGGCAAGGCCTGCATTCCCA...GGAGAGGGCTGTGCCCGTAAGGGGAAGTACGGGATCTACACCAAGGTCACCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR GCA 90 bp CCCTTCTCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGTCATCCCACTGACCTCTTCCTaGGTTCCAGGGTCTGTTTCC +
Preference number: 4 (lower is better)
Translates to: PFSWVRPKPLTIPVFCVIPLTSS*VPGSVS
Trigger: GGAAACAGACCCTGGAACGCAGGAAGAGGTCAGTGG...GATGACGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR GCA 90 bp CCCTTCTCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGTCATCGGGGTCCAGGTCGGCTaGATCATATGGCTTCCATGT +
Preference number: 4 (lower is better)
Translates to: PFSWVRPKPLTIPVFCVIGVQVG*IIWLPC
Trigger: ACATGGAAGCCATATGATGCAGCCGACCTGGACCCC...GATGACGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR GCA 90 bp CCGTTGTCAGCCAGGGTGTACCCGCGGGCGCAGGAGCACACCACAGAGTTCTGTGGGGTCCAGGTCGGCTaGATCATATGGCTTCCATGT +
Preference number: 4 (lower is better)
Translates to: PLSARVYPRAQEHTTEFCGVQVG*IIWLPC
Trigger: ACATGGAAGCCATATGATGCAGCCGACCTGGACCCC...ACAGAACTCTGTGGTGTGCTCCTGCGCCCGCGGGTACACCCTGGCTGACAACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410083.6
CDS-3UTR GCA 90 bp GCTGACGATGCCTGTCACGAAGTAGGTGTCCTTGAAGCGGGTGACGTGCGGGCCTCGCCCCTCTCAGGCTaGGTCTGGTTGAAGTCAAGC +
Preference number: 4 (lower is better)
Translates to: ADDACHEVGVLEAGDVRASPLSG*VWLKSS
Trigger: GCTTGACTTCAACCAGACGCAGCCTGAGAGGGGCGA...GGCCCGCACGTCACCCGCTTCAAGGACACCTACTTCGTGACAGGCATCGTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR GCA 90 bp GTTGTCAGCCAGGGTGTACCCGCGGGCGCAGGAGCACACCACAGAGTTCTGTTCTCGCCCCTCTCAGGCTaGGTCTGGTTGAAGTCAAGC +
Preference number: 4 (lower is better)
Translates to: VVSQGVPAGAGAHHRVLFSPLSG*VWLKSS
Trigger: GCTTGACTTCAACCAGACGCAGCCTGAGAGGGGCGA...GAACAGAACTCTGTGGTGTGCTCCTGCGCCCGCGGGTACACCCTGGCTGACAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410083.6
CDS-3UTR GCA 90 bp GGGTTGAGCAAAGGGCCAGAGCCAGGCGACAGGTACACTTGCCTTGAAGGGCAATTGATGAGCAGGGCCTaGCAGGGACACTCCCCGTCC +
Preference number: 4 (lower is better)
Translates to: GLSKGPEPGDRYTCLEGQLMSRA*QGHSPS
Trigger: GGACGGGGAGTGTCCCTGGCAGGCCCTGCTCATCAA...TTGCCCTTCAAGGCAAGTGTACCTGTCGCCTGGCTCTGGCCCTTTGCTCAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410083.6
CDS-3UTR GCA 90 bp GACTGCCGGCCCTTCTCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTTTGTGAACCGGTTGTaGTTGATGACCACCTCCACC +
Preference number: 4 (lower is better)
Translates to: DCRPFSWVRPKPLTIPVFFVNRL*LMTTST
Trigger: GGTGGAGGTGGTCATCAAGCACAACCGGTTCACAAA...GAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGGGCCGGCAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR GCA 90 bp GCCCTTCTCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGTCATACAATCCCCGTCTTCTaGGTCATCAGCGTGGACTCG +
Preference number: 4 (lower is better)
Translates to: ALLVGAPEAAHNPRLLRHTIPVF*VISVDS
Trigger: CGAGTCCACGCTGATGACGCAGAAGACGGGGATTGT...ATGACGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR GCA 90 bp GGTACCCCCTGCCCCAGCAGCACTCACATTACGGTCACTCCACATCCCTCTGTGATGGCCGGTACCCCCTaGCCCAGCAGCACTCACATT +
Preference number: 4 (lower is better)
Translates to: GTPCPSSTHITVTPHPSVMAGTP*PSSTHI
Trigger: AATGTGAGTGCTGCTGGGGCAGGGGGTACCGGCCAT...CACAGAGGGATGTGGAGTGACCGTAATGTGAGTGCTGCTGGGGCAGGGGGTACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000410083.6
CDS-3UTR CCA 90 bp CCCTTCTCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGTCATCGGTTCTGGCAAGGACTaGTCTCACACTGGTCGCCAT +
Preference number: 4 (lower is better)
Translates to: PFSWVRPKPLTIPVFCVIGSGKD*SHTGRH
Trigger: ATGGCGACCAGTGTGAGACCAGTCCTTGCCAGAACC...GATGACGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CCA 90 bp CTCCAGCATCTTGAGCCTGGTGGACTGCCGGCCCTTCTCGTGGGTGCGCCCGAACATTTGCCCTGGTTCTaGCAAGGACTGGTCTCACAC +
Preference number: 4 (lower is better)
Translates to: LQHLEPGGLPALLVGAPEHLPWF*QGLVSH
Trigger: GTGTGAGACCAGTCCTTGCCAGAACCAGGGCAAATG...TTCGGGCGCACCCACGAGAAGGGCCGGCAGTCCACCAGGCTCAAGATGCTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CCA 90 bp GCTGACGATGCCTGTCACGAAGTAGGTGTCCTTGAAGCGGGTGACGTGCGGGCCTCCTCGTGGCAGAACTaGTCACAGTCCCCGTTGTCC +
Preference number: 4 (lower is better)
Translates to: ADDACHEVGVLEAGDVRASSWQN*SQSPLS
Trigger: GGACAACGGGGACTGTGACCAGTTCTGCCACGAGGA...GGCCCGCACGTCACCCGCTTCAAGGACACCTACTTCGTGACAGGCATCGTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CCA 90 bp AGCAAAGGGCCAGAGCCAGGCGACAGGTACACTTGCCTTGAAGGGCAACCTCACAGGGGTAGGGCCCTGTaGGAATGCAGGCCTTGCCGT +
Preference number: 4 (lower is better)
Translates to: SKGPEPGDRYTCLEGQPHRGRAL*ECRPCR
Trigger: ACGGCAAGGCCTGCATTCCCACAGGGCCCTACCCCT...GTGAGGTTGCCCTTCAAGGCAAGTGTACCTGTCGCCTGGCTCTGGCCCTTTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410083.6
CDS-3UTR TCA 90 bp CTGTTCCTCGTGGCAGAACTGGTCACAGTCCCCGTTGTCCAGGCTGCAGAGCTTCTCCCACGATCCTGGTaGGGTTGTTGTCGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: LFLVAELVTVPVVQAAELLPRSW*GCCRPS
Trigger: AGAGGGGCGACAACAACCTCACCAGGATCGTGGGAG...AAGCTCTGCAGCCTGGACAACGGGGACTGTGACCAGTTCTGCCACGAGGAACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410083.6
CDS-3UTR TCA 90 bp GCCCTTCTCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGTCATGTGTTCCGGTCCCCTTaGATCTCTTGGCTTGGTAGA +
Preference number: 4 (lower is better)
Translates to: ALLVGAPEAAHNPRLLRHVFRSP*ISWLGR
Trigger: TCTACCAAGCCAAGAGATTCAAGGGGACCGGAACAC...ATGACGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375551.7
CDS-3UTR GCA 90 bp CCCTTCTCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGTCATCAGGATGTTGTTGGCCTaGTCCCTGCGGATGAACAGA +
Preference number: 4 (lower is better)
Translates to: PFSWVRPKPLTIPVFCVIRMLLA*SLRMNR
Trigger: TCTGTTCATCCGCAGGGAGCAGGCCAACAACATCCT...GATGACGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR GCA 90 bp TCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGTCATCAGCGTGAGGATGTTGTTGGCCTaGTCCCTGCGGATGAACAGA +
Preference number: 4 (lower is better)
Translates to: SWVRPKPLTIPVFCVISVRMLLA*SLRMNR
Trigger: TCTGTTCATCCGCAGGGAGCAGGCCAACAACATCCT...CACGCTGATGACGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR GCA 90 bp GCTGACGATGCCTGTCACGAAGTAGGTGTCCTTGAAGCGGGTGACGTGCGGGCCCCACTGACCTCTTCCTaGGTTCCAGGGTCTGTTTCC +
Preference number: 4 (lower is better)
Translates to: ADDACHEVGVLEAGDVRAPLTSS*VPGSVS
Trigger: GGAAACAGACCCTGGAACGCAGGAAGAGGTCAGTGG...GGCCCGCACGTCACCCGCTTCAAGGACACCTACTTCGTGACAGGCATCGTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR GCA 90 bp TGCTGCTGGTGGCCTGGGCCACTGACCTCTTCCTGCGTTCCAGGGTCTGTTTCCCCACTGACCTCTTCCTaGGTTCCAGGGTCTGTTTCC +
Preference number: 4 (lower is better)
Translates to: CCWWPGPLTSSCVPGSVSPLTSS*VPGSVS
Trigger: GGAAACAGACCCTGGAACGCAGGAAGAGGTCAGTGG...GGAAACAGACCCTGGAACGCAGGAAGAGGTCAGTGGCCCAGGCCACCAGCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410083.6
CDS-3UTR GCA 90 bp CCTTCTCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGTCATCAGGGGTCCAGGTCGGCTaGATCATATGGCTTCCATGT +
Preference number: 4 (lower is better)
Translates to: PSRGCARSRSQSPSSASSGVQVG*IIWLPC
Trigger: ACATGGAAGCCATATGATGCAGCCGACCTGGACCCC...TGATGACGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR GCA 90 bp GGCGGTGACCTTGGTGTAGATCCCGTACTTCCCCTTACGGGCACAGCCCTCTCCACAATCCCCGTCTTCTaGGTCATCAGCGTGGACTCG +
Preference number: 4 (lower is better)
Translates to: GGDLGVDPVLPLTGTALSTIPVF*VISVDS
Trigger: CGAGTCCACGCTGATGACGCAGAAGACGGGGATTGT...GGAGAGGGCTGTGCCCGTAAGGGGAAGTACGGGATCTACACCAAGGTCACCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR GCA 90 bp AAGGGTGCCAGCTACATCCACTTGCCTGTCAGCCACAAAGCGGCCATTGGGTTGCAGGCTCCAGGTACCTaGCCCTCACACCTCCGGGAT +
Preference number: 4 (lower is better)
Translates to: KGASYIHLPVSHKAAIGLQAPGT*PSHLRD
Trigger: ATCCCGGAGGTGTGAGGGGCAGGTACCTGGAGCCTG...CAACCCAATGGCCGCTTTGTGGCTGACAGGCAAGTGGATGTAGCTGGCACCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410083.6
CDS-3UTR CCA 90 bp GCCTGTCAGCCACAAAGCGGCCATTGGGTTGAGCAAAGGGCCAGAGCCAGGCGAGGTTCTGGCAAGGACTaGTCTCACACTGGTCGCCAT +
Preference number: 4 (lower is better)
Translates to: ACQPQSGHWVEQRARARRGSGKD*SHTGRH
Trigger: ATGGCGACCAGTGTGAGACCAGTCCTTGCCAGAACC...TCGCCTGGCTCTGGCCCTTTGCTCAACCCAATGGCCGCTTTGTGGCTGACAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410083.6
CDS-3UTR CCA 90 bp CTCCAGCATCTTGAGCCTGGTGGACTGCCGGCCCTTCTCGTGGGTGCGCCCGAAGTCGGCTGCATCATATaGCTTCCATGTGATGCTGTC +
Preference number: 4 (lower is better)
Translates to: LQHLEPGGLPALLVGAPEVGCII*LPCDAV
Trigger: GACAGCATCACATGGAAGCCATATGATGCAGCCGAC...TTCGGGCGCACCCACGAGAAGGGCCGGCAGTCCACCAGGCTCAAGATGCTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CCA 90 bp AGCAAAGGGCCAGAGCCAGGCGACAGGTACACTTGCCTTGAAGGGCAACCTCACCCGTCCTTGCATTCCTaGCCTCCCACGATCCTGGTG +
Preference number: 4 (lower is better)
Translates to: SKGPEPGDRYTCLEGQPHPSLHS*PPTILV
Trigger: CACCAGGATCGTGGGAGGCCAGGAATGCAAGGACGG...GTGAGGTTGCCCTTCAAGGCAAGTGTACCTGTCGCCTGGCTCTGGCCCTTTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410083.6
CDS-3UTR TCA 90 bp CTGTTCCTCGTGGCAGAACTGGTCACAGTCCCCGTTGTCCAGGCTGCAGAGCTTCATATGGCTTCCATGTaGTGCTGTCAGGGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: LFLVAELVTVPVVQAAELHMASM*CCQGPP
Trigger: GGGAGGCCCCTGACAGCATCACATGGAAGCCATATG...AAGCTCTGCAGCCTGGACAACGGGGACTGTGACCAGTTCTGCCACGAGGAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410083.6
CDS-3UTR GCA 90 bp GGCGGTGACCTTGGTGTAGATCCCGTACTTCCCCTTACGGGCACAGCCCTCTCCGGCCGTCTTTACATTTaGCCTGGTTCTGGCAAGGAC +
Preference number: 4 (lower is better)
Translates to: GGDLGVDPVLPLTGTALSGRLYI*PGSGKD
Trigger: GTCCTTGCCAGAACCAGGGCAAATGTAAAGACGGCC...GGAGAGGGCTGTGCCCGTAAGGGGAAGTACGGGATCTACACCAAGGTCACCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR GCA 90 bp TCGTGGCAGAACTGGTCACAGTCCCCGTTGTCCAGGCTGCAGAGCTTCCGTGTGGGCGACAGGTACACTTaGCTTGAAGGGCAACCTCAC +
Preference number: 4 (lower is better)
Translates to: SWQNWSQSPLSRLQSFRVGDRYT*LEGQPH
Trigger: GTGAGGTTGCCCTTCAAGGCAAGTGTACCTGTCGCC...CACACGGAAGCTCTGCAGCCTGGACAACGGGGACTGTGACCAGTTCTGCCACGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410083.6
CDS-3UTR CCA 90 bp GCTGACGATGCCTGTCACGAAGTAGGTGTCCTTGAAGCGGGTGACGTGCGGGCCGAGTTCTGTTCCTCGTaGCAGAACTGGTCACAGTCC +
Preference number: 4 (lower is better)
Translates to: ADDACHEVGVLEAGDVRAEFCSS*QNWSQS
Trigger: GGACTGTGACCAGTTCTGCCACGAGGAACAGAACTC...GGCCCGCACGTCACCCGCTTCAAGGACACCTACTTCGTGACAGGCATCGTCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CCA 90 bp CAAGCAGGTCGAAGGGGTTCTCGGTGGGGTCCAGGTCGGCTGCATCATATGGCTCTCTCAGGCTGCGTCTaGTTGAAGTCAAGCAGGTCG +
Preference number: 4 (lower is better)
Translates to: QAGRRGSRWGPGRLHHMALSGCV*LKSSRS
Trigger: CGACCTGCTTGACTTCAACCAGACGCAGCCTGAGAG...AGCCATATGATGCAGCCGACCTGGACCCCACCGAGAACCCCTTCGACCTGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410083.6
CDS-3UTR CCA 90 bp CGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGTCATCAGCGTGGACTCGGCCAGAACTCGCTCAGAATaGTTCCACCACAGAAACCCT +
Preference number: 4 (lower is better)
Translates to: RPKPLTIPVFCVISVDSARTRSE*FHHRNP
Trigger: AGGGTTTCTGTGGTGGAACCATTCTGAGCGAGTTCT...GGCCGAGTCCACGCTGATGACGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CCA 90 bp AGAGTTCTGTTCCTCGTGGCAGAACTGGTCACAGTCCCCGTTGTCCAGGCTGCAGGCTCTGGGGACAGCTaGAGAAATGGAGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: RVLFLVAELVTVPVVQAAGSGDS*RNGGWA
Trigger: AGCCCAGCCTCCATTTCTCCAGCTGTCCCCAGAGCC...TGCAGCCTGGACAACGGGGACTGTGACCAGTTCTGCCACGAGGAACAGAACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410083.6
CDS-3UTR CCA 90 bp AGGTCGAAGGGGTTCTCGGTGGGGTCCAGGTCGGCTGCATCATATGGCTTCCATGAGGCACGTTGGCTCTaGGGACAGCTGGAGAAATGG +
Preference number: 4 (lower is better)
Translates to: RSKGFSVGSRSAASYGFHEARWL*GQLEKW
Trigger: CCATTTCTCCAGCTGTCCCCAGAGCCAACGTGCCTC...ATGGAAGCCATATGATGCAGCCGACCTGGACCCCACCGAGAACCCCTTCGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410083.6
CDS-3UTR CCA 90 bp TCAAGCAGGTCGAAGGGGTTCTCGGTGGGGTCCAGGTCGGCTGCATCATATGGCCATTTGCCCTGGTTCTaGCAAGGACTGGTCTCACAC +
Preference number: 4 (lower is better)
Translates to: SSRSKGFSVGSRSAASYGHLPWF*QGLVSH
Trigger: GTGTGAGACCAGTCCTTGCCAGAACCAGGGCAAATG...GCCATATGATGCAGCCGACCTGGACCCCACCGAGAACCCCTTCGACCTGCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410083.6
CDS-3UTR CCA 90 bp CCCTTCTCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGTCATCTCTTTACATTTGCCCTaGTTCTGGCAAGGACTGGTC +
Preference number: 4 (lower is better)
Translates to: PFSWVRPKPLTIPVFCVISLHLP*FWQGLV
Trigger: GACCAGTCCTTGCCAGAACCAGGGCAAATGTAAAGA...GATGACGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CCA 90 bp TCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGTCATCAGCGTGTCTTTACATTTGCCCTaGTTCTGGCAAGGACTGGTC +
Preference number: 4 (lower is better)
Translates to: SWVRPKPLTIPVFCVISVSLHLP*FWQGLV
Trigger: GACCAGTCCTTGCCAGAACCAGGGCAAATGTAAAGA...CACGCTGATGACGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CCA 90 bp CCACTGACCTCTTCCTGCGTTCCAGGGTCTGTTTCCCACAGGGGTAGGGCCCTGGTCGGCTGCATCATATaGCTTCCATGTGATGCTGTC +
Preference number: 4 (lower is better)
Translates to: PLTSSCVPGSVSHRGRALVGCII*LPCDAV
Trigger: GACAGCATCACATGGAAGCCATATGATGCAGCCGAC...CAGGGCCCTACCCCTGTGGGAAACAGACCCTGGAACGCAGGAAGAGGTCAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410083.6
3UTR CAA 72 bp TTGCATTCCTGGCCTCCCACGATCCTGGTGAGGTTGTaGTCGCCCCTCTCAGGCTGCGTCTGGTTGAAGTCA +
Preference number: 4 (lower is better)
Translates to: LHSWPPTILVRL*SPLSGCVWLKS
Trigger: TGACTTCAACCAGACGCAGCCTGAGAGGGGCGACAACAACCTCACCAGGATCGTGGGAGGCCAGGAATGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410083.6
CDS-3UTR TCA 90 bp CGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGTCATCAGCGTGGACTCGGCCTGCAGAGCTTCCGTGTaGATAATTCACAGTTTTTGC +
Preference number: 4 (lower is better)
Translates to: RPKPLTIPVFCVISVDSACRASV*IIHSFC
Trigger: GCAAAAACTGTGAATTATTCACACGGAAGCTCTGCA...GGCCGAGTCCACGCTGATGACGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR GCA 90 bp CAAGCCCCTGGTTTTCATGGACCTGTCGATCCACTTGAGGAAGGCGGTGACCTTACAGCTTGCAGCTGTTaGGGTCCACGTAGGGCACCT +
Preference number: 4 (lower is better)
Translates to: QAPGFHGPVDPLEEGGDLTACSC*GPRRAP
Trigger: AGGTGCCCTACGTGGACCGCAACAGCTGCAAGCTGT...AAGGTCACCGCCTTCCTCAAGTGGATCGACAGGTCCATGAAAACCAGGGGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375551.7
CDS-3UTR GCA 90 bp AATGGTTCCACCACAGAAACCCTCGTTTTCCTCATTGATGAGCAGGGCCTGCCAACGGGGAGCTCATGGTaGAGTGCCCGGTGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: NGSTTETLVFLIDEQGLPTGSSW*SARCSQ
Trigger: CTGGCTACACCGGGCACTGCACCATGAGCTCCCCGT...TGGCAGGCCCTGCTCATCAATGAGGAAAACGAGGGTTTCTGTGGTGGAACCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410083.6
CDS-3UTR CCA 90 bp TCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGTCATCAGCGTGGGACTGGTCTCACACTaGTCGCCATCTTTGTATTTA +
Preference number: 4 (lower is better)
Translates to: SWVRPKPLTIPVFCVISVGLVSH*SPSLYL
Trigger: TAAATACAAAGATGGCGACCAGTGTGAGACCAGTCC...CACGCTGATGACGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CCA 90 bp CCCTTCTCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGTCATCGGACTGGTCTCACACTaGTCGCCATCTTTGTATTTA +
Preference number: 4 (lower is better)
Translates to: PFSWVRPKPLTIPVFCVIGLVSH*SPSLYL
Trigger: TAAATACAAAGATGGCGACCAGTGTGAGACCAGTCC...GATGACGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CCA 90 bp CTGACCTCTTCCTGCGTTCCAGGGTCTGTTTCCCACAGGGGTAGGGCCCTGTGGTCTTTACATTTGCCCTaGTTCTGGCAAGGACTGGTC +
Preference number: 4 (lower is better)
Translates to: LTSSCVPGSVSHRGRALWSLHLP*FWQGLV
Trigger: GACCAGTCCTTGCCAGAACCAGGGCAAATGTAAAGA...CCACAGGGCCCTACCCCTGTGGGAAACAGACCCTGGAACGCAGGAAGAGGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410083.6
CDS-3UTR CCA 90 bp AGCTACATCCACTTGCCTGTCAGCCACAAAGCGGCCATTGGGTTGAGCAAAGGGTCCTCGTGGCAGAACTaGTCACAGTCCCCGTTGTCC +
Preference number: 4 (lower is better)
Translates to: SYIHLPVSHKAAIGLSKGSSWQN*SQSPLS
Trigger: GGACAACGGGGACTGTGACCAGTTCTGCCACGAGGA...CCCTTTGCTCAACCCAATGGCCGCTTTGTGGCTGACAGGCAAGTGGATGTAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410083.6
CDS-3UTR CCA 90 bp CCAAGGGTGCCAGCTACATCCACTTGCCTGTCAGCCACAAAGCGGCCATTGGGTGAGTTCTGTTCCTCGTaGCAGAACTGGTCACAGTCC +
Preference number: 4 (lower is better)
Translates to: PRVPATSTCLSATKRPLGEFCSS*QNWSQS
Trigger: GGACTGTGACCAGTTCTGCCACGAGGAACAGAACTC...ACCCAATGGCCGCTTTGTGGCTGACAGGCAAGTGGATGTAGCTGGCACCCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410083.6
CDS-3UTR CCA 90 bp AGAATGGTTCCACCACAGAAACCCTCGTTTTCCTCATTGATGAGCAGGGCCTGCCTGCTGCTGGTGGCCTaGGCCACTGACCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: RMVPPQKPSFSSLMSRACLLLVA*ATDLFL
Trigger: CAGGAAGAGGTCAGTGGCCCAGGCCACCAGCAGCAG...GCAGGCCCTGCTCATCAATGAGGAAAACGAGGGTTTCTGTGGTGGAACCATTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410083.6
CDS-3UTR CCA 90 bp GCTGACGATGCCTGTCACGAAGTAGGTGTCCTTGAAGCGGGTGACGTGCGGGCCAGAACTCGCTCAGAATaGTTCCACCACAGAAACCCT +
Preference number: 4 (lower is better)
Translates to: ADDACHEVGVLEAGDVRARTRSE*FHHRNP
Trigger: AGGGTTTCTGTGGTGGAACCATTCTGAGCGAGTTCT...GGCCCGCACGTCACCCGCTTCAAGGACACCTACTTCGTGACAGGCATCGTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CCA 90 bp AGCTACATCCACTTGCCTGTCAGCCACAAAGCGGCCATTGGGTTGAGCAAAGGGAAAGGAGAGGCACGTTaGCTCTGGGGACAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: SYIHLPVSHKAAIGLSKGKGEAR*LWGQLE
Trigger: CTCCAGCTGTCCCCAGAGCCAACGTGCCTCTCCTTT...CCCTTTGCTCAACCCAATGGCCGCTTTGTGGCTGACAGGCAAGTGGATGTAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410083.6
3UTR CAA 72 bp TTCTGTTCCTCGTGGCAGAACTGGTCACAGTCCCCGTaGTCCAGGCTGCAGAGCTTCCGTGTGACTGCAAAG +
Preference number: 4 (lower is better)
Translates to: FCSSWQNWSQSP*SRLQSFRVTAK
Trigger: CTTTGCAGTCACACGGAAGCTCTGCAGCCTGGACAACGGGGACTGTGACCAGTTCTGCCACGAGGAACAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410083.6
3UTR CAA 72 bp AGAATGGTTCCACCACAGAAACCCTCGTTTTCCTCATaGATGAGCAGGGCCTGCCAGGGACACTCCCCGTCC +
Preference number: 4 (lower is better)
Translates to: RMVPPQKPSFSS*MSRACQGHSPS
Trigger: GGACGGGGAGTGTCCCTGGCAGGCCCTGCTCATCAATGAGGAAAACGAGGGTTTCTGTGGTGGAACCATTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410083.6
CDS-3UTR TCA 90 bp CCCTTCTCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGTCATCTGCAGAGCTTCCGTGTaGATAATTCACAGTTTTTGC +
Preference number: 4 (lower is better)
Translates to: PFSWVRPKPLTIPVFCVICRASV*IIHSFC
Trigger: GCAAAAACTGTGAATTATTCACACGGAAGCTCTGCA...GATGACGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CCA 90 bp CACTCACATTACGGTCACTCCACATCCCTCTGTGTGGCTTTTGATGAAAAAGTACCCCGCTGCTGCTGGTaGCCTGGGCCACTGACCTCT +
Preference number: 4 (lower is better)
Translates to: HSHYGHSTSLCVAFDEKVPRCCW*PGPLTS
Trigger: AGAGGTCAGTGGCCCAGGCCACCAGCAGCAGCGGGG...TACTTTTTCATCAAAAGCCACACAGAGGGATGTGGAGTGACCGTAATGTGAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000410083.6
CDS-3UTR CCA 90 bp AGGTCGAAGGGGTTCTCGGTGGGGTCCAGGTCGGCTGCATCATATGGCTTCCATAGAACTCGCTCAGAATaGTTCCACCACAGAAACCCT +
Preference number: 4 (lower is better)
Translates to: RSKGFSVGSRSAASYGFHRTRSE*FHHRNP
Trigger: AGGGTTTCTGTGGTGGAACCATTCTGAGCGAGTTCT...ATGGAAGCCATATGATGCAGCCGACCTGGACCCCACCGAGAACCCCTTCGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410083.6
CDS-3UTR GCA 90 bp ATGGTTCCACCACAGAAACCCTCGTTTTCCTCATTGATGAGCAGGGCCTGCCAGGGCCGTCTTTACATTTaGCCTGGTTCTGGCAAGGAC +
Preference number: 4 (lower is better)
Translates to: MVPPQKPSFSSLMSRACQGRLYI*PGSGKD
Trigger: GTCCTTGCCAGAACCAGGGCAAATGTAAAGACGGCC...CTGGCAGGCCCTGCTCATCAATGAGGAAAACGAGGGTTTCTGTGGTGGAACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410083.6
CDS-3UTR GCA 90 bp CAAGCCCCTGGTTTTCATGGACCTGTCGATCCACTTGAGGAAGGCGGTGACCTTTTTGTGAACCGGTTGTaGTTGATGACCACCTCCACC +
Preference number: 4 (lower is better)
Translates to: QAPGFHGPVDPLEEGGDLFVNRL*LMTTST
Trigger: GGTGGAGGTGGTCATCAAGCACAACCGGTTCACAAA...AAGGTCACCGCCTTCCTCAAGTGGATCGACAGGTCCATGAAAACCAGGGGCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375551.7
CDS-3UTR CCA 90 bp CTGCCCCAGCAGCACTCACATTACGGTCACTCCACATCCCTCTGTGTGGCTTTTGGACTGGTCTCACACTaGTCGCCATCTTTGTATTTA +
Preference number: 4 (lower is better)
Translates to: LPQQHSHYGHSTSLCVAFGLVSH*SPSLYL
Trigger: TAAATACAAAGATGGCGACCAGTGTGAGACCAGTCC...AAAAGCCACACAGAGGGATGTGGAGTGACCGTAATGTGAGTGCTGCTGGGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410083.6
CDS-3UTR CCA 90 bp CACTCACATTACGGTCACTCCACATCCCTCTGTGTGGCTTTTGATGAAAAAGTATGGAGAAATGGAGGCTaGGCTGGCCCAAGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: HSHYGHSTSLCVAFDEKVWRNGG*AGPRVP
Trigger: TGGCACCCTTGGGCCAGCCCAGCCTCCATTTCTCCA...TACTTTTTCATCAAAAGCCACACAGAGGGATGTGGAGTGACCGTAATGTGAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410083.6
CDS-3UTR CCA 90 bp CACTCACATTACGGTCACTCCACATCCCTCTGTGTGGCTTTTGATGAAAAAGTACCACAAAGCGGCCATTaGGTTGAGCAAAGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: HSHYGHSTSLCVAFDEKVPQSGH*VEQRAR
Trigger: TCTGGCCCTTTGCTCAACCCAATGGCCGCTTTGTGG...TACTTTTTCATCAAAAGCCACACAGAGGGATGTGGAGTGACCGTAATGTGAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410083.6
CDS CCA 90 bp TGGCCTGGCGTCAGTTGTGCGCCTGCGCGCTGGCGCTCTAGGCTGTaGCTCTCAGCGACTACGGAGGCCAAGGCAGGACGCGGGCGTCTT +
Preference number: 5 (lower is better)
Translates to: WPGVSCAPARWRSRL*LSATTEAKAGRGRL
Trigger: AAGACGCCCGCGTCCTGCCTTGGCCTCCGTAGTCGCTGAGAGCCACAGCCTAGAGCGCCAGCGCGCAGGCGCACAACTGACGCCAGGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483537.1
CDS GCA 90 bp CTGCGGCTGCGCAATCGCGGCCTGGTGGCATTGCTCTCCTCCTACTaGGCAGGCGCGATGCTGGGTTCGTCGTCCGGTGTGGATGCCGGT +
Preference number: 5 (lower is better)
Translates to: LRLRNRGLVALLSSY*AGAMLGSSSGVDAG
Trigger: ACCGGCATCCACACCGGACGACGAACCCAGCATCGCGCCTGCGCAGTAGGAGGAGAGCAATGCCACCAGGCCGCGATTGCGCAGCCGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483537.1
CDS-3UTR CAA 90 bp GTCATCAGCGTGGACTCGGCCCAGTCACGCTCGGGGAGGCAGGCAGGCGCCACGACGATCCTGGTGAGGTaGTTGTCGCCCCTCTCAGGC +
Preference number: 5 (lower is better)
Translates to: VISVDSAQSRSGRQAGATTILVR*LSPLSG
Trigger: GCCTGAGAGGGGCGACAACAACCTCACCAGGATCGT...CGTGGCGCCTGCCTGCCTCCCCGAGCGTGACTGGGCCGAGTCCACGCTGATGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CAA 90 bp GACTGCCGGCCCTTCTCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCGGACACTCCCCGTCCTaGCATTCCTGGCCTCCCACG +
Preference number: 5 (lower is better)
Translates to: DCRPFSWVRPKPLTIPVFGHSPS*HSWPPT
Trigger: CGTGGGAGGCCAGGAATGCAAGGACGGGGAGTGTCC...GAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGGGCCGGCAGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS CCA 90 bp GCAGTACTGGGTTCGTGGCCTGGCGTCAGTTGTGCGCCTGCGCGCTaGCGCTCTAGGCTGTGGCTCTCAGCGACTACGGAGGCCAAGGCA +
Preference number: 5 (lower is better)
Translates to: AVLGSWPGVSCAPAR*RSRLWLSATTEAKA
Trigger: TGCCTTGGCCTCCGTAGTCGCTGAGAGCCACAGCCTAGAGCGCCAGCGCGCAGGCGCACAACTGACGCCAGGCCACGAACCCAGTACTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483537.1
CDS-3UTR CAA 90 bp CTCCAGCATCTTGAGCCTGGTGGACTGCCGGCCCTTCTCGTGGGTGCGCCCGAAACCCTCGCCAGGATGTaGTTGGCCTGCTCCCTGCGG +
Preference number: 5 (lower is better)
Translates to: LQHLEPGGLPALLVGAPETLARM*LACSLR
Trigger: CCGCAGGGAGCAGGCCAACAACATCCTGGCGAGGGT...TTCGGGCGCACCCACGAGAAGGGCCGGCAGTCCACCAGGCTCAAGATGCTGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CAA 90 bp CCGGCCCTTCTCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGTGTGGGAATGCAGGCCTaGCCGTTGTCAGCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: PALLVGAPEAAHNPRLLRVGMQA*PLSARV
Trigger: CACCCTGGCTGACAACGGCAAGGCCTGCATTCCCAC...ACGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGGGCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CAA 90 bp CTCCAGCATCTTGAGCCTGGTGGACTGCCGGCCCTTCTCGTGGGTGCGCCCGAACTCGCCAGGATGTTGTaGGCCTGCTCCCTGCGGATG +
Preference number: 5 (lower is better)
Translates to: LQHLEPGGLPALLVGAPELARML*ACSLRM
Trigger: CATCCGCAGGGAGCAGGCCAACAACATCCTGGCGAG...TTCGGGCGCACCCACGAGAAGGGCCGGCAGTCCACCAGGCTCAAGATGCTGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CAA 90 bp CGGCCCTTCTCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGTCATCCTGGTGAGGTTGTaGTCGCCCCTCTCAGGCTGC +
Preference number: 5 (lower is better)
Translates to: RPFSWVRPKPLTIPVFCVILVRL*SPLSGC
Trigger: GCAGCCTGAGAGGGGCGACAACAACCTCACCAGGAT...GACGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGGGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CAA 90 bp GCCCTTCTCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGTCATGGACACTCCCCGTCCTaGCATTCCTGGCCTCCCACG +
Preference number: 5 (lower is better)
Translates to: ALLVGAPEAAHNPRLLRHGHSPS*HSWPPT
Trigger: CGTGGGAGGCCAGGAATGCAAGGACGGGGAGTGTCC...ATGACGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CAA 90 bp GCCGGCCCTTCTCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGCCCTCGTTTTCCTCATaGATGAGCAGGGCCTGCCAG +
Preference number: 5 (lower is better)
Translates to: AGPSRGCARSRSQSPSSAPSFSS*MSRACQ
Trigger: CTGGCAGGCCCTGCTCATCAATGAGGAAAACGAGGG...CGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGGGCCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CAA 90 bp CGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGTCATCAGCGTGGACTCGGCCAAGGTGATGGGGGTCTaGAGCCGGAGCACGGCGATG +
Preference number: 5 (lower is better)
Translates to: RPKPLTIPVFCVISVDSAKVMGV*SRSTAM
Trigger: CATCGCCGTGCTCCGGCTCAAGACCCCCATCACCTT...GGCCGAGTCCACGCTGATGACGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CAA 90 bp GACTGCCGGCCCTTCTCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCAAGCTGCTGGACAGCTaGCAGCTGTTGCGGTCCACG +
Preference number: 5 (lower is better)
Translates to: DCRPFSWVRPKPLTIPVFKLLDS*QLLRST
Trigger: CGTGGACCGCAACAGCTGCAAGCTGTCCAGCAGCTT...GAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGGGCCGGCAGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CAA 90 bp CCGGCCCTTCTCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGTAAGCTGCTGGACAGCTaGCAGCTGTTGCGGTCCACG +
Preference number: 5 (lower is better)
Translates to: PALLVGAPEAAHNPRLLRKLLDS*QLLRST
Trigger: CGTGGACCGCAACAGCTGCAAGCTGTCCAGCAGCTT...ACGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGGGCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS GCA 90 bp GTCTCCTTTGTGAACCGGTTGTGCTTGATGACCACCTCCACCTCGTaGACCGCCTCACCGCCCTCCTCCTGCTCCGTGTTCCGGTCCCCC +
Preference number: 5 (lower is better)
Translates to: VSFVNRLCLMTTSTS*TASPPSSCSVFRSP
Trigger: GGGGGACCGGAACACGGAGCAGGAGGAGGGCGGTGAGGCGGTGCACGAGGTGGAGGTGGTCATCAAGCACAACCGGTTCACAAAGGAGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409306.5
CDS GCA 90 bp CCTTCCCGGATTGCTATTCCAAGTGTCAGGCTGGCCTCCCCGAGGTaGACAGCGGGACAGGTGGTCTCTCCAGCAGGCCCGAGGGGACAT +
Preference number: 5 (lower is better)
Translates to: PSRIAIPSVRLASPR*TAGQVVSPAGPRGH
Trigger: ATGTCCCCTCGGGCCTGCTGGAGAGACCACCTGTCCCGCTGTGCACCTCGGGGAGGCCAGCCTGACACTTGGAATAGCAATCCGGGAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477269.5
CDS-3UTR CAA 90 bp GCTGACGATGCCTGTCACGAAGTAGGTGTCCTTGAAGCGGGTGACGTGCGGGCCACCCTCGCCAGGATGTaGTTGGCCTGCTCCCTGCGG +
Preference number: 5 (lower is better)
Translates to: ADDACHEVGVLEAGDVRATLARM*LACSLR
Trigger: CCGCAGGGAGCAGGCCAACAACATCCTGGCGAGGGT...GGCCCGCACGTCACCCGCTTCAAGGACACCTACTTCGTGACAGGCATCGTCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CAA 90 bp CTCCAGCATCTTGAGCCTGGTGGACTGCCGGCCCTTCTCGTGGGTGCGCCCGAATGGTCACAGTCCCCGTaGTCCAGGCTGCAGAGCTTC +
Preference number: 5 (lower is better)
Translates to: LQHLEPGGLPALLVGAPEWSQSP*SRLQSF
Trigger: GAAGCTCTGCAGCCTGGACAACGGGGACTGTGACCA...TTCGGGCGCACCCACGAGAAGGGCCGGCAGTCCACCAGGCTCAAGATGCTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CAA 90 bp GCCCTTCTCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGTCATATGCAGGCCTTGCCGTaGTCAGCCAGGGTGTACCCG +
Preference number: 5 (lower is better)
Translates to: ALLVGAPEAAHNPRLLRHMQALP*SARVYP
Trigger: CGGGTACACCCTGGCTGACAACGGCAAGGCCTGCAT...ATGACGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CAA 90 bp TCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGTCATCAGCGTGATGCAGGCCTTGCCGTaGTCAGCCAGGGTGTACCCG +
Preference number: 5 (lower is better)
Translates to: SWVRPKPLTIPVFCVISVMQALP*SARVYP
Trigger: CGGGTACACCCTGGCTGACAACGGCAAGGCCTGCAT...CACGCTGATGACGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CAA 90 bp CTTGAGCCTGGTGGACTGCCGGCCCTTCTCGTGGGTGCGCCCGAAGCCGCTCACTCAGGCTGCGTCTGGTaGAAGTCAAGCAGGTCGAAG +
Preference number: 5 (lower is better)
Translates to: LEPGGLPALLVGAPEAAHSGCVW*KSSRSK
Trigger: CTTCGACCTGCTTGACTTCAACCAGACGCAGCCTGA...GTGAGCGGCTTCGGGCGCACCCACGAGAAGGGCCGGCAGTCCACCAGGCTCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CAA 90 bp CCCTTCTCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGTCATCAAGGTGATGGGGGTCTaGAGCCGGAGCACGGCGATG +
Preference number: 5 (lower is better)
Translates to: PFSWVRPKPLTIPVFCVIKVMGV*SRSTAM
Trigger: CATCGCCGTGCTCCGGCTCAAGACCCCCATCACCTT...GATGACGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS GCA 90 bp GTCTCCTTTGTGAACCGGTTGTGCTTGATGACCACCTCCACCTCGTaGACCGCCTCACCGCCCTCCTCCTGCTCCGTGTTCCGGTCCCCT +
Preference number: 5 (lower is better)
Translates to: VSFVNRLCLMTTSTS*TASPPSSCSVFRSP
Trigger: AGGGGACCGGAACACGGAGCAGGAGGAGGGCGGTGAGGCGGTGCACGAGGTGGAGGTGGTCATCAAGCACAACCGGTTCACAAAGGAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000375559.8
CDS GCA 90 bp CAGGTGGTCTCTCCAGCAGGCCCGAGGGGACATCCTACTGTTACCTaGCAGGGACACTCCCCGTCCTTGCATTCCTGGCCTCCCACGATC +
Preference number: 5 (lower is better)
Translates to: QVVSPAGPRGHPTVT*QGHSPSLHSWPPTI
Trigger: GATCGTGGGAGGCCAGGAATGCAAGGACGGGGAGTGTCCCTGGCAGGTAACAGTAGGATGTCCCCTCGGGCCTGCTGGAGAGACCACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477269.5
CDS-3UTR CAA 90 bp CCTTCTCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGTCATCACTCGCCAGGATGTTGTaGGCCTGCTCCCTGCGGATG +
Preference number: 5 (lower is better)
Translates to: PSRGCARSRSQSPSSASSLARML*ACSLRM
Trigger: CATCCGCAGGGAGCAGGCCAACAACATCCTGGCGAG...TGATGACGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CAA 90 bp CCACTGACCTCTTCCTGCGTTCCAGGGTCTGTTTCCCACAGGGGTAGGGCCCTGCTCGCCAGGATGTTGTaGGCCTGCTCCCTGCGGATG +
Preference number: 5 (lower is better)
Translates to: PLTSSCVPGSVSHRGRALLARML*ACSLRM
Trigger: CATCCGCAGGGAGCAGGCCAACAACATCCTGGCGAG...CAGGGCCCTACCCCTGTGGGAAACAGACCCTGGAACGCAGGAAGAGGTCAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410083.6
CDS-3UTR CAA 90 bp CCGGCCCTTCTCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGTTCTTCAAGAAAGGAATaGGCCCTCGTGACCCTCGCC +
Preference number: 5 (lower is better)
Translates to: PALLVGAPEAAHNPRLLRSSRKE*ALVTLA
Trigger: GGCGAGGGTCACGAGGGCCAATTCCTTTCTTGAAGA...ACGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGGGCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CAA 90 bp GCCGGCCCTTCTCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGAGGCCGTCTTTACATTaGCCCTGGTTCTGGCAAGGA +
Preference number: 5 (lower is better)
Translates to: AGPSRGCARSRSQSPSSARPSLH*PWFWQG
Trigger: TCCTTGCCAGAACCAGGGCAAATGTAAAGACGGCCT...CGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGGGCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CAA 90 bp CCCTTCTCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGTCATCTGGTCACAGTCCCCGTaGTCCAGGCTGCAGAGCTTC +
Preference number: 5 (lower is better)
Translates to: PFSWVRPKPLTIPVFCVIWSQSP*SRLQSF
Trigger: GAAGCTCTGCAGCCTGGACAACGGGGACTGTGACCA...GATGACGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CAA 90 bp TGCTGCTGGTGGCCTGGGCCACTGACCTCTTCCTGCGTTCCAGGGTCTGTTTCCATGCAGGCCTTGCCGTaGTCAGCCAGGGTGTACCCG +
Preference number: 5 (lower is better)
Translates to: CCWWPGPLTSSCVPGSVSMQALP*SARVYP
Trigger: CGGGTACACCCTGGCTGACAACGGCAAGGCCTGCAT...GGAAACAGACCCTGGAACGCAGGAAGAGGTCAGTGGCCCAGGCCACCAGCAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410083.6
CDS-3UTR CAA 90 bp CCCTTCTCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGTCATCACGATCCTGGTGAGGTaGTTGTCGCCCCTCTCAGGC +
Preference number: 5 (lower is better)
Translates to: PFSWVRPKPLTIPVFCVITILVR*LSPLSG
Trigger: GCCTGAGAGGGGCGACAACAACCTCACCAGGATCGT...GATGACGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS GCA 90 bp TTGATGACCACCTCCACCTCGTGCACCGCCTCACCGCCCTCCTCCTaGTCCGTGTTCCGGTCCCCTACCCTCACCTTGAATCTCTTGGCT +
Preference number: 5 (lower is better)
Translates to: LMTTSTSCTASPPSS*SVFRSPTLTLNLLA
Trigger: AGCCAAGAGATTCAAGGTGAGGGTAGGGGACCGGAACACGGAGCAGGAGGAGGGCGGTGAGGCGGTGCACGAGGTGGAGGTGGTCATCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375559.8
CDS-3UTR CAA 90 bp CGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGTCATCAGCGTGGACTCGGCCTCTTCAAGAAAGGAATaGGCCCTCGTGACCCTCGCC +
Preference number: 5 (lower is better)
Translates to: RPKPLTIPVFCVISVDSASSRKE*ALVTLA
Trigger: GGCGAGGGTCACGAGGGCCAATTCCTTTCTTGAAGA...GGCCGAGTCCACGCTGATGACGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CAA 90 bp GGGTCACGGGGAGCTCATGGTGCAGTGCCCGGTGTAGCCAGAAGCCAGGCTCCATCTTCAAGAAAGGAATaGGCCCTCGTGACCCTCGCC +
Preference number: 5 (lower is better)
Translates to: GSRGAHGAVPGVARSQAPSSRKE*ALVTLA
Trigger: GGCGAGGGTCACGAGGGCCAATTCCTTTCTTGAAGA...TGGAGCCTGGCTTCTGGCTACACCGGGCACTGCACCATGAGCTCCCCGTGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410083.6
CDS-3UTR CAA 90 bp CCACTGACCTCTTCCTGCGTTCCAGGGTCTGTTTCCCACAGGGGTAGGGCCCTGTGGTCACAGTCCCCGTaGTCCAGGCTGCAGAGCTTC +
Preference number: 5 (lower is better)
Translates to: PLTSSCVPGSVSHRGRALWSQSP*SRLQSF
Trigger: GAAGCTCTGCAGCCTGGACAACGGGGACTGTGACCA...CAGGGCCCTACCCCTGTGGGAAACAGACCCTGGAACGCAGGAAGAGGTCAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410083.6
CDS-3UTR CAA 90 bp GCTGACGATGCCTGTCACGAAGTAGGTGTCCTTGAAGCGGGTGACGTGCGGGCCATCCTGGTGAGGTTGTaGTCGCCCCTCTCAGGCTGC +
Preference number: 5 (lower is better)
Translates to: ADDACHEVGVLEAGDVRAILVRL*SPLSGC
Trigger: GCAGCCTGAGAGGGGCGACAACAACCTCACCAGGAT...GGCCCGCACGTCACCCGCTTCAAGGACACCTACTTCGTGACAGGCATCGTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CAA 90 bp GTTGTCAGCCAGGGTGTACCCGCGGGCGCAGGAGCACACCACAGAGTTCTGTTCATCCTGGTGAGGTTGTaGTCGCCCCTCTCAGGCTGC +
Preference number: 5 (lower is better)
Translates to: VVSQGVPAGAGAHHRVLFILVRL*SPLSGC
Trigger: GCAGCCTGAGAGGGGCGACAACAACCTCACCAGGAT...GAACAGAACTCTGTGGTGTGCTCCTGCGCCCGCGGGTACACCCTGGCTGACAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410083.6
CDS-3UTR CAA 90 bp CCCTTCTCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGTCATCGACCTGTCGATCCACTaGAGGAAGGCGGTGACCTTG +
Preference number: 5 (lower is better)
Translates to: PFSWVRPKPLTIPVFCVIDLSIH*RKAVTL
Trigger: CAAGGTCACCGCCTTCCTCAAGTGGATCGACAGGTC...GATGACGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CAA 90 bp GGGCCACTGACCTCTTCCTGCGTTCCAGGGTCTGTTTCCCACAGGGGTAGGGCCGCCAGCTACATCCACTaGCCTGTCAGCCACAAAGCG +
Preference number: 5 (lower is better)
Translates to: GPLTSSCVPGSVSHRGRAASYIH*PVSHKA
Trigger: CGCTTTGTGGCTGACAGGCAAGTGGATGTAGCTGGC...GGCCCTACCCCTGTGGGAAACAGACCCTGGAACGCAGGAAGAGGTCAGTGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410083.6
CDS TCA 90 bp GCCTCACCGCCCTCCTCCTGCTCCGTGTTCCGGTCCCCCTCACCTTaGATCTCTTGGCTTGGTAGAGACAGTGGGCTGCCGTTAGGATGT +
Preference number: 5 (lower is better)
Translates to: ASPPSSCSVFRSPSP*ISWLGRDSGLPLGC
Trigger: ACATCCTAACGGCAGCCCACTGTCTCTACCAAGCCAAGAGATTCAAGGTGAGGGGGACCGGAACACGGAGCAGGAGGAGGGCGGTGAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409306.5
CDS-3UTR CAA 90 bp GGCGGTGACCTTGGTGTAGATCCCGTACTTCCCCTTACGGGCACAGCCCTCTCCGTGAACCGGTTGTGCTaGATGACCACCTCCACCTCG +
Preference number: 5 (lower is better)
Translates to: GGDLGVDPVLPLTGTALSVNRLC*MTTSTS
Trigger: CGAGGTGGAGGTGGTCATCAAGCACAACCGGTTCAC...GGAGAGGGCTGTGCCCGTAAGGGGAAGTACGGGATCTACACCAAGGTCACCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CAA 90 bp GCTGACGATGCCTGTCACGAAGTAGGTGTCCTTGAAGCGGGTGACGTGCGGGCCGTGAACCGGTTGTGCTaGATGACCACCTCCACCTCG +
Preference number: 5 (lower is better)
Translates to: ADDACHEVGVLEAGDVRAVNRLC*MTTSTS
Trigger: CGAGGTGGAGGTGGTCATCAAGCACAACCGGTTCAC...GGCCCGCACGTCACCCGCTTCAAGGACACCTACTTCGTGACAGGCATCGTCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CAA 90 bp CGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGTCATCAGCGTGGACTCGGCCTCCTTTGTGAACCGGTaGTGCTTGATGACCACCTCC +
Preference number: 5 (lower is better)
Translates to: RPKPLTIPVFCVISVDSASFVNR*CLMTTS
Trigger: GGAGGTGGTCATCAAGCACAACCGGTTCACAAAGGA...GGCCGAGTCCACGCTGATGACGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS TCA 90 bp CACCGCCCTCCTCCTGCTCCGTGTTCCGGTCCCCTACCCTCACCTTaGATCTCTTGGCTTGGTAGAGACAGTGGGCTGCCGTTAGGATGT +
Preference number: 5 (lower is better)
Translates to: HRPPPAPCSGPLPSP*ISWLGRDSGLPLGC
Trigger: ACATCCTAACGGCAGCCCACTGTCTCTACCAAGCCAAGAGATTCAAGGTGAGGGTAGGGGACCGGAACACGGAGCAGGAGGAGGGCGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375559.8
CDS CCA 90 bp CGGGCGCAGGAGCACACCACAGAGTTCTGTTCCTCGTGGCAGAACTaGTCACAGTCCCCGTTGTCCAGGCTGCAGAGCTTCCGTGTGAAT +
Preference number: 5 (lower is better)
Translates to: RAQEHTTEFCSSWQN*SQSPLSRLQSFRVN
Trigger: ATTCACACGGAAGCTCTGCAGCCTGGACAACGGGGACTGTGACCAGTTCTGCCACGAGGAACAGAACTCTGTGGTGTGCTCCTGCGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375551.7
ENST00000375559.8
ENST00000409306.5
ENST00000477269.5
CDS CCA 90 bp AGTTCGGAACAGTTCCTTCCCGGATTGCTATTCCAAGTGTCAGGCTaGCCTCCCCGAGGTGCACAGCGGGACAGGTGGTCTCTCCAGCAG +
Preference number: 5 (lower is better)
Translates to: SSEQFLPGLLFQVSG*PPRGAQRDRWSLQQ
Trigger: CTGCTGGAGAGACCACCTGTCCCGCTGTGCACCTCGGGGAGGCCAGCCTGACACTTGGAATAGCAATCCGGGAAGGAACTGTTCCGAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477269.5
CDS-3UTR CAA 90 bp TCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGTCATCAGCGTGAGGCCGTCTTTACATTaGCCCTGGTTCTGGCAAGGA +
Preference number: 5 (lower is better)
Translates to: SWVRPKPLTIPVFCVISVRPSLH*PWFWQG
Trigger: TCCTTGCCAGAACCAGGGCAAATGTAAAGACGGCCT...CACGCTGATGACGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CAA 90 bp GAAGTCAAGCAGGTCGAAGGGGTTCTCGGTGGGGTCCAGGTCGGCTGCATCATACAAAGGAGAGGCACGTaGGCTCTGGGGACAGCTGGA +
Preference number: 5 (lower is better)
Translates to: EVKQVEGVLGGVQVGCIIQRRGT*ALGTAG
Trigger: TCCAGCTGTCCCCAGAGCCAACGTGCCTCTCCTTTG...TATGATGCAGCCGACCTGGACCCCACCGAGAACCCCTTCGACCTGCTTGACTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000410083.6
CDS-3UTR CAA 90 bp CAAGCCCCTGGTTTTCATGGACCTGTCGATCCACTTGAGGAAGGCGGTGACCTTGTGGGAATGCAGGCCTaGCCGTTGTCAGCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: QAPGFHGPVDPLEEGGDLVGMQA*PLSARV
Trigger: CACCCTGGCTGACAACGGCAAGGCCTGCATTCCCAC...AAGGTCACCGCCTTCCTCAAGTGGATCGACAGGTCCATGAAAACCAGGGGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375551.7
CDS-3UTR CAA 90 bp ACAGAGTTCTGTTCCTCGTGGCAGAACTGGTCACAGTCCCCGTTGTCCAGGCTGACGATCCTGGTGAGGTaGTTGTCGCCCCTCTCAGGC +
Preference number: 5 (lower is better)
Translates to: TEFCSSWQNWSQSPLSRLTILVR*LSPLSG
Trigger: GCCTGAGAGGGGCGACAACAACCTCACCAGGATCGT...CAGCCTGGACAACGGGGACTGTGACCAGTTCTGCCACGAGGAACAGAACTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410083.6
CDS-3UTR CAA 90 bp GGCCTTGGGCAAGCCCCTGGTTTTCATGGACCTGTCGATCCACTTGAGGAAGGCGACCTGTCGATCCACTaGAGGAAGGCGGTGACCTTG +
Preference number: 5 (lower is better)
Translates to: GLGQAPGFHGPVDPLEEGDLSIH*RKAVTL
Trigger: CAAGGTCACCGCCTTCCTCAAGTGGATCGACAGGTC...GCCTTCCTCAAGTGGATCGACAGGTCCATGAAAACCAGGGGCTTGCCCAAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375551.7
CDS-3UTR CAA 90 bp GCCCTTCTCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGTCATCAGAATTCATTCGTCTaGTCGCTGTCCTCAAAGACC +
Preference number: 5 (lower is better)
Translates to: ALLVGAPEAAHNPRLLRHQNSFV*SLSSKT
Trigger: GGTCTTTGAGGACAGCGACAAGACGAATGAATTCTG...ATGACGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CAA 90 bp CTTGAGCCTGGTGGACTGCCGGCCCTTCTCGTGGGTGCGCCCGAAGCCGCTCACCACTGGTCGCCATCTTaGTATTTATTCCAGAATTCA +
Preference number: 5 (lower is better)
Translates to: LEPGGLPALLVGAPEAAHHWSPS*YLFQNS
Trigger: TGAATTCTGGAATAAATACAAAGATGGCGACCAGTG...GTGAGCGGCTTCGGGCGCACCCACGAGAAGGGCCGGCAGTCCACCAGGCTCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CAA 90 bp TCAAGCAGGTCGAAGGGGTTCTCGGTGGGGTCCAGGTCGGCTGCATCATATGGCAGGCCGTCTTTACATTaGCCCTGGTTCTGGCAAGGA +
Preference number: 5 (lower is better)
Translates to: SSRSKGFSVGSRSAASYGRPSLH*PWFWQG
Trigger: TCCTTGCCAGAACCAGGGCAAATGTAAAGACGGCCT...GCCATATGATGCAGCCGACCTGGACCCCACCGAGAACCCCTTCGACCTGCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410083.6
CDS-3UTR CAA 90 bp GGCCTTGGGCAAGCCCCTGGTTTTCATGGACCTGTCGATCCACTTGAGGAAGGCTCAGGCTGCGTCTGGTaGAAGTCAAGCAGGTCGAAG +
Preference number: 5 (lower is better)
Translates to: GLGQAPGFHGPVDPLEEGSGCVW*KSSRSK
Trigger: CTTCGACCTGCTTGACTTCAACCAGACGCAGCCTGA...GCCTTCCTCAAGTGGATCGACAGGTCCATGAAAACCAGGGGCTTGCCCAAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375551.7
CDS-3UTR CAA 90 bp AATGGTTCCACCACAGAAACCCTCGTTTTCCTCATTGATGAGCAGGGCCTGCCAGGACACTCCCCGTCCTaGCATTCCTGGCCTCCCACG +
Preference number: 5 (lower is better)
Translates to: NGSTTETLVFLIDEQGLPGHSPS*HSWPPT
Trigger: CGTGGGAGGCCAGGAATGCAAGGACGGGGAGTGTCC...TGGCAGGCCCTGCTCATCAATGAGGAAAACGAGGGTTTCTGTGGTGGAACCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410083.6
CDS-3UTR CAA 90 bp CCTTCTCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGTCATCACAGAATTCATTCGTCTaGTCGCTGTCCTCAAAGACC +
Preference number: 5 (lower is better)
Translates to: PSRGCARSRSQSPSSASSQNSFV*SLSSKT
Trigger: GGTCTTTGAGGACAGCGACAAGACGAATGAATTCTG...TGATGACGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CAA 90 bp AATGGTTCCACCACAGAAACCCTCGTTTTCCTCATTGATGAGCAGGGCCTGCCAGTGGGAATGCAGGCCTaGCCGTTGTCAGCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: NGSTTETLVFLIDEQGLPVGMQA*PLSARV
Trigger: CACCCTGGCTGACAACGGCAAGGCCTGCATTCCCAC...TGGCAGGCCCTGCTCATCAATGAGGAAAACGAGGGTTTCTGTGGTGGAACCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410083.6
CDS-3UTR CAA 90 bp GGCCTTGGGCAAGCCCCTGGTTTTCATGGACCTGTCGATCCACTTGAGGAAGGCTCCTTTGTGAACCGGTaGTGCTTGATGACCACCTCC +
Preference number: 5 (lower is better)
Translates to: GLGQAPGFHGPVDPLEEGSFVNR*CLMTTS
Trigger: GGAGGTGGTCATCAAGCACAACCGGTTCACAAAGGA...GCCTTCCTCAAGTGGATCGACAGGTCCATGAAAACCAGGGGCTTGCCCAAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375551.7
CDS-3UTR CAA 90 bp ATGGTTCCACCACAGAAACCCTCGTTTTCCTCATTGATGAGCAGGGCCTGCCAGCCCTCGTTTTCCTCATaGATGAGCAGGGCCTGCCAG +
Preference number: 5 (lower is better)
Translates to: MVPPQKPSFSSLMSRACQPSFSS*MSRACQ
Trigger: CTGGCAGGCCCTGCTCATCAATGAGGAAAACGAGGG...CTGGCAGGCCCTGCTCATCAATGAGGAAAACGAGGGTTTCTGTGGTGGAACCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410083.6
CDS-3UTR CAA 90 bp TCGTGGGTGCGCCCGAAGCCGCTCACAATCCCCGTCTTCTGCGTCATCAGCGTGCACTGGTCGCCATCTTaGTATTTATTCCAGAATTCA +
Preference number: 5 (lower is better)
Translates to: SWVRPKPLTIPVFCVISVHWSPS*YLFQNS
Trigger: TGAATTCTGGAATAAATACAAAGATGGCGACCAGTG...CACGCTGATGACGCAGAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375551.7
ENST00000409306.5
CDS-3UTR CAA 90 bp AGAATGGTTCCACCACAGAAACCCTCGTTTTCCTCATTGATGAGCAGGGCCTGCAAAGCGGCCATTGGGTaGAGCAAAGGGCCAGAGCCA +
Preference number: 5 (lower is better)
Translates to: RMVPPQKPSFSSLMSRACKAAIG*SKGPEP
Trigger: TGGCTCTGGCCCTTTGCTCAACCCAATGGCCGCTTT...GCAGGCCCTGCTCATCAATGAGGAAAACGAGGGTTTCTGTGGTGGAACCATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410083.6
CDS GCA 90 bp CTTCTAAACAGGTGCAGGTGTATTCCCCGAGGCCGTCTTTACATTTaGCCTGGTTCTGGCAAGGACTGGTCTCACACTGGTCGCCATCTT +
Preference number: 5 (lower is better)
Translates to: LLNRCRCIPRGRLYI*PGSGKDWSHTGRHL
Trigger: AAGATGGCGACCAGTGTGAGACCAGTCCTTGCCAGAACCAGGGCAAATGTAAAGACGGCCTCGGGGAATACACCTGCACCTGTTTAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375551.7
ENST00000375559.8
ENST00000409306.5
ENST00000410083.6
ENST00000477269.5
CDS-3UTR CAA 90 bp AGAATGGTTCCACCACAGAAACCCTCGTTTTCCTCATTGATGAGCAGGGCCTGCTCAGGCTGCGTCTGGTaGAAGTCAAGCAGGTCGAAG +
Preference number: 5 (lower is better)
Translates to: RMVPPQKPSFSSLMSRACSGCVW*KSSRSK
Trigger: CTTCGACCTGCTTGACTTCAACCAGACGCAGCCTGA...GCAGGCCCTGCTCATCAATGAGGAAAACGAGGGTTTCTGTGGTGGAACCATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410083.6
CDS-3UTR CAA 90 bp AATGGTTCCACCACAGAAACCCTCGTTTTCCTCATTGATGAGCAGGGCCTGCCAACAGGTACACTTGCCTaGAAGGGCAACCTCACGGGT +
Preference number: 5 (lower is better)
Translates to: NGSTTETLVFLIDEQGLPTGTLA*KGNLTG
Trigger: ACCCGTGAGGTTGCCCTTCAAGGCAAGTGTACCTGT...TGGCAGGCCCTGCTCATCAATGAGGAAAACGAGGGTTTCTGTGGTGGAACCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410083.6
CDS CCA 90 bp AAACAGGTGCAGGTGTATTCCCCGAGGCCGTCTTTACATTTGCCCTaGTTCTGGCAAGGACTGGTCTCACACTGGTCGCCATCTTTGTAT +
Preference number: 5 (lower is better)
Translates to: KQVQVYSPRPSLHLP*FWQGLVSHWSPSLY
Trigger: ATACAAAGATGGCGACCAGTGTGAGACCAGTCCTTGCCAGAACCAGGGCAAATGTAAAGACGGCCTCGGGGAATACACCTGCACCTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375551.7
ENST00000375559.8
ENST00000409306.5
ENST00000410083.6
ENST00000477269.5
CDS-3UTR CAA 90 bp CTGCCCCAGCAGCACTCACATTACGGTCACTCCACATCCCTCTGTGTGGCTTTTCAGAATTCATTCGTCTaGTCGCTGTCCTCAAAGACC +
Preference number: 5 (lower is better)
Translates to: LPQQHSHYGHSTSLCVAFQNSFV*SLSSKT
Trigger: GGTCTTTGAGGACAGCGACAAGACGAATGAATTCTG...AAAAGCCACACAGAGGGATGTGGAGTGACCGTAATGTGAGTGCTGCTGGGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410083.6
CDS-3UTR CAA 90 bp GTCAAGCAGGTCGAAGGGGTTCTCGGTGGGGTCCAGGTCGGCTGCATCATATGGCACTGGTCGCCATCTTaGTATTTATTCCAGAATTCA +
Preference number: 5 (lower is better)
Translates to: VKQVEGVLGGVQVGCIIWHWSPS*YLFQNS
Trigger: TGAATTCTGGAATAAATACAAAGATGGCGACCAGTG...CCATATGATGCAGCCGACCTGGACCCCACCGAGAACCCCTTCGACCTGCTTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410083.6
CDS GCA 90 bp CCTCAAAGACCTCGCGGGCCTCTTCGTATGAGCAGGTCTCTTCCATaGACTCTCTTTCGAGGTGTCCTTTCTTCATCTCTTCAAGAAAGG +
Preference number: 5 (lower is better)
Translates to: PQRPRGPLRMSRSLP*TLFRGVLSSSLQER
Trigger: CCTTTCTTGAAGAGATGAAGAAAGGACACCTCGAAAGAGAGTGCATGGAAGAGACCTGCTCATACGAAGAGGCCCGCGAGGTCTTTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000375551.7
ENST00000375559.8
ENST00000409306.5
ENST00000410083.6
ENST00000477269.5
ENST00000483537.1
CDS CCA 90 bp GTGCAGGTGTATTCCCCGAGGCCGTCTTTACATTTGCCCTGGTTCTaGCAAGGACTGGTCTCACACTGGTCGCCATCTTTGTATTTATTC +
Preference number: 5 (lower is better)
Translates to: VQVYSPRPSLHLPWF*QGLVSHWSPSLYLF
Trigger: GAATAAATACAAAGATGGCGACCAGTGTGAGACCAGTCCTTGCCAGAACCAGGGCAAATGTAAAGACGGCCTCGGGGAATACACCTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375551.7
ENST00000375559.8
ENST00000409306.5
ENST00000410083.6
ENST00000477269.5
CDS CCA 90 bp ATTCCCCGAGGCCGTCTTTACATTTGCCCTGGTTCTGGCAAGGACTaGTCTCACACTGGTCGCCATCTTTGTATTTATTCCAGAATTCAT +
Preference number: 5 (lower is better)
Translates to: IPRGRLYICPGSGKD*SHTGRHLCIYSRIH
Trigger: ATGAATTCTGGAATAAATACAAAGATGGCGACCAGTGTGAGACCAGTCCTTGCCAGAACCAGGGCAAATGTAAAGACGGCCTCGGGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375551.7
ENST00000375559.8
ENST00000409306.5
ENST00000410083.6
ENST00000477269.5
CDS GCA 90 bp ACATGCATAATTCACAGTTTTTGCCTTCGAATCCTTCTAAACAGGTaGAGGTGTATTCCCCGAGGCCGTCTTTACATTTGCCCTGGTTCT +
Preference number: 5 (lower is better)
Translates to: TCIIHSFCLRILLNR*RCIPRGRLYICPGS
Trigger: AGAACCAGGGCAAATGTAAAGACGGCCTCGGGGAATACACCTGCACCTGTTTAGAAGGATTCGAAGGCAAAAACTGTGAATTATGCATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410083.6
CDS GCA 72 bp CGCAGGCGCGATGCTGGGTTCGTCGTCCGGTGTGGATaGCGGTCTTCCTGCTGCGCAGGCACCGTGCTGGGT +
Preference number: 6 (lower is better)
Translates to: RRRDAGFVVRCG*RSSCCAGTVLG
Trigger: ACCCAGCACGGTGCCTGCGCAGCAGGAAGACCGGCATCCACACCGGACGACGAACCCAGCATCGCGCCTGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483537.1
CDS CCA 72 bp GTCAGTTGTGCGCCTGCGCGCTGGCGCTCTAGGCTGTaGCTCTCAGCGACTACGGAGGCCAAGGCAGGACGC +
Preference number: 6 (lower is better)
Translates to: VSCAPARWRSRL*LSATTEAKAGR
Trigger: GCGTCCTGCCTTGGCCTCCGTAGTCGCTGAGAGCCACAGCCTAGAGCGCCAGCGCGCAGGCGCACAACTGAC
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483537.1
CDS CCA 72 bp GGTTCGTGGCCTGGCGTCAGTTGTGCGCCTGCGCGCTaGCGCTCTAGGCTGTGGCTCTCAGCGACTACGGAG +
Preference number: 6 (lower is better)
Translates to: GSWPGVSCAPAR*RSRLWLSATTE
Trigger: CTCCGTAGTCGCTGAGAGCCACAGCCTAGAGCGCCAGCGCGCAGGCGCACAACTGACGCCAGGCCACGAACC
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483537.1
CDS GCA 72 bp CGCAATCGCGGCCTGGTGGCATTGCTCTCCTCCTACTaGGCAGGCGCGATGCTGGGTTCGTCGTCCGGTGTG +
Preference number: 6 (lower is better)
Translates to: RNRGLVALLSSY*AGAMLGSSSGV
Trigger: CACACCGGACGACGAACCCAGCATCGCGCCTGCGCAGTAGGAGGAGAGCAATGCCACCAGGCCGCGATTGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483537.1
CDS CCA 72 bp CTGAGCAGGACGAGGTGCAGTGGGCGCCCCATGGTGTaGCCGAGTACTGTGTCCCTGTCCTCACTGGGACAG +
Preference number: 6 (lower is better)
Translates to: LSRTRCSGRPMV*PSTVSLSSLGQ
Trigger: CTGTCCCAGTGAGGACAGGGACACAGTACTCGGCCACACCATGGGGCGCCCACTGCACCTCGTCCTGCTCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375551.7
ENST00000375559.8
ENST00000409306.5
CDS GCA 72 bp GTGAACCGGTTGTGCTTGATGACCACCTCCACCTCGTaGACCGCCTCACCGCCCTCCTCCTGCTCCGTGTTC +
Preference number: 6 (lower is better)
Translates to: VNRLCLMTTSTS*TASPPSSCSVF
Trigger: GAACACGGAGCAGGAGGAGGGCGGTGAGGCGGTGCACGAGGTGGAGGTGGTCATCAAGCACAACCGGTTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375551.7
ENST00000375559.8
ENST00000409306.5
CDS GCA 72 bp ATTGCTATTCCAAGTGTCAGGCTGGCCTCCCCGAGGTaGACAGCGGGACAGGTGGTCTCTCCAGCAGGCCCG +
Preference number: 6 (lower is better)
Translates to: IAIPSVRLASPR*TAGQVVSPAGP
Trigger: CGGGCCTGCTGGAGAGACCACCTGTCCCGCTGTGCACCTCGGGGAGGCCAGCCTGACACTTGGAATAGCAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477269.5
CDS GCA 72 bp TGGTGGCATTGCTCTCCTCCTACTGCGCAGGCGCGATaGTGGGTTCGTCGTCCGGTGTGGATGCCGGTCTTC +
Preference number: 6 (lower is better)
Translates to: WWHCSPPTAQAR*WVRRPVWMPVF
Trigger: GAAGACCGGCATCCACACCGGACGACGAACCCAGCATCGCGCCTGCGCAGTAGGAGGAGAGCAATGCCACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483537.1
CDS CCA 72 bp TGGCATTGCTCTCCTCCTACTGCGCAGGCGCGATGCTaGGTTCGTCGTCCGGTGTGGATGCCGGTCTTCCTG +
Preference number: 6 (lower is better)
Translates to: WHCSPPTAQARC*VRRPVWMPVFL
Trigger: CAGGAAGACCGGCATCCACACCGGACGACGAACCCAGCATCGCGCCTGCGCAGTAGGAGGAGAGCAATGCCA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483537.1
CDS TCA 72 bp TCACCGCCCTCCTCCTGCTCCGTGTTCCGGTCCCCTTaGATCTCTTGGCTTGGTAGAGACAGTGGGCTGCCG +
Preference number: 6 (lower is better)
Translates to: SPPSSCSVFRSP*ISWLGRDSGLP
Trigger: CGGCAGCCCACTGTCTCTACCAAGCCAAGAGATTCAAGGGGACCGGAACACGGAGCAGGAGGAGGGCGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375551.7
CDS TCA 72 bp CCCTCCTCCTGCTCCGTGTTCCGGTCCCCCTCACCTTaGATCTCTTGGCTTGGTAGAGACAGTGGGCTGCCG +
Preference number: 6 (lower is better)
Translates to: PSSCSVFRSPSP*ISWLGRDSGLP
Trigger: CGGCAGCCCACTGTCTCTACCAAGCCAAGAGATTCAAGGTGAGGGGGACCGGAACACGGAGCAGGAGGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409306.5
CDS GCA 72 bp TTGGCCCTCGTGACCCTCGCCAGGATGTTGTTGGCCTaGTCCCTGCGGATGAACAGACTTTCCCCGAGCAGC +
Preference number: 6 (lower is better)
Translates to: LALVTLARMLLA*SLRMNRLSPSS
Trigger: GCTGCTCGGGGAAAGTCTGTTCATCCGCAGGGAGCAGGCCAACAACATCCTGGCGAGGGTCACGAGGGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375551.7
ENST00000375559.8
ENST00000409306.5
ENST00000410083.6
ENST00000477269.5
ENST00000483537.1
CDS GCA 72 bp TCTCCAGCAGGCCCGAGGGGACATCCTACTGTTACCTaGCAGGGACACTCCCCGTCCTTGCATTCCTGGCCT +
Preference number: 6 (lower is better)
Translates to: SPAGPRGHPTVT*QGHSPSLHSWP
Trigger: AGGCCAGGAATGCAAGGACGGGGAGTGTCCCTGGCAGGTAACAGTAGGATGTCCCCTCGGGCCTGCTGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477269.5
CDS CCA 72 bp CTCAGTGCTAGTGCTTCTGCTGTGCAGGAGCAGTACTaGGTTCGTGGCCTGGCGTCAGTTGTGCGCCTGCGC +
Preference number: 6 (lower is better)
Translates to: LSASASAVQEQY*VRGLASVVRLR
Trigger: GCGCAGGCGCACAACTGACGCCAGGCCACGAACCCAGTACTGCTCCTGCACAGCAGAAGCACTAGCACTGAG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483537.1
CDS TCA 72 bp CCTCCTGCTCCGTGTTCCGGTCCCCTACCCTCACCTTaGATCTCTTGGCTTGGTAGAGACAGTGGGCTGCCG +
Preference number: 6 (lower is better)
Translates to: PPAPCSGPLPSP*ISWLGRDSGLP
Trigger: CGGCAGCCCACTGTCTCTACCAAGCCAAGAGATTCAAGGTGAGGGTAGGGGACCGGAACACGGAGCAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375559.8
CDS CAA 72 bp AAGGAATTGGCCCTCGTGACCCTCGCCAGGATGTTGTaGGCCTGCTCCCTGCGGATGAACAGACTTTCCCCG +
Preference number: 6 (lower is better)
Translates to: KELALVTLARML*ACSLRMNRLSP
Trigger: CGGGGAAAGTCTGTTCATCCGCAGGGAGCAGGCCAACAACATCCTGGCGAGGGTCACGAGGGCCAATTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375551.7
ENST00000375559.8
ENST00000409306.5
ENST00000410083.6
ENST00000477269.5
ENST00000483537.1
CDS CAA 90 bp TCTTCAAGAAAGGAATTGGCCCTCGTGACCCTCGCCAGGATGTTGTaGGCCTGCTCCCTGCGGATGAACAGACTTTCCCCGAGCAGCAGG +
Preference number: 6 (lower is better)
Translates to: SSRKELALVTLARML*ACSLRMNRLSPSSR
Trigger: CCTGCTGCTCGGGGAAAGTCTGTTCATCCGCAGGGAGCAGGCCAACAACATCCTGGCGAGGGTCACGAGGGCCAATTCCTTTCTTGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375551.7
ENST00000375559.8
ENST00000409306.5
ENST00000410083.6
ENST00000477269.5
ENST00000483537.1
CDS CAA 90 bp ATCTCTTCAAGAAAGGAATTGGCCCTCGTGACCCTCGCCAGGATGTaGTTGGCCTGCTCCCTGCGGATGAACAGACTTTCCCCGAGCAGC +
Preference number: 6 (lower is better)
Translates to: ISSRKELALVTLARM*LACSLRMNRLSPSS
Trigger: GCTGCTCGGGGAAAGTCTGTTCATCCGCAGGGAGCAGGCCAACAACATCCTGGCGAGGGTCACGAGGGCCAATTCCTTTCTTGAAGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375551.7
ENST00000375559.8
ENST00000409306.5
ENST00000410083.6
ENST00000477269.5
ENST00000483537.1
CDS CCA 72 bp CAGGTGTATTCCCCGAGGCCGTCTTTACATTTGCCCTaGTTCTGGCAAGGACTGGTCTCACACTGGTCGCCA +
Preference number: 6 (lower is better)
Translates to: QVYSPRPSLHLP*FWQGLVSHWSP
Trigger: TGGCGACCAGTGTGAGACCAGTCCTTGCCAGAACCAGGGCAAATGTAAAGACGGCCTCGGGGAATACACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375551.7
ENST00000375559.8
ENST00000409306.5
ENST00000410083.6
ENST00000477269.5
CDS CAA 72 bp AGAAAGGAATTGGCCCTCGTGACCCTCGCCAGGATGTaGTTGGCCTGCTCCCTGCGGATGAACAGACTTTCC +
Preference number: 6 (lower is better)
Translates to: RKELALVTLARM*LACSLRMNRLS
Trigger: GGAAAGTCTGTTCATCCGCAGGGAGCAGGCCAACAACATCCTGGCGAGGGTCACGAGGGCCAATTCCTTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000375551.7
ENST00000375559.8
ENST00000409306.5
ENST00000410083.6
ENST00000477269.5
ENST00000483537.1
CDS CAA 72 bp CAGGTGCAGGTGTATTCCCCGAGGCCGTCTTTACATTaGCCCTGGTTCTGGCAAGGACTGGTCTCACACTGG +
Preference number: 6 (lower is better)
Translates to: QVQVYSPRPSLH*PWFWQGLVSHW
Trigger: CCAGTGTGAGACCAGTCCTTGCCAGAACCAGGGCAAATGTAAAGACGGCCTCGGGGAATACACCTGCACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375551.7
ENST00000375559.8
ENST00000409306.5
ENST00000410083.6
ENST00000477269.5
CDS GCA 72 bp AGGTGCAGGTGTATTCCCCGAGGCCGTCTTTACATTTaGCCTGGTTCTGGCAAGGACTGGTCTCACACTGGT +
Preference number: 6 (lower is better)
Translates to: RCRCIPRGRLYI*PGSGKDWSHTG
Trigger: ACCAGTGTGAGACCAGTCCTTGCCAGAACCAGGGCAAATGTAAAGACGGCCTCGGGGAATACACCTGCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375551.7
ENST00000375559.8
ENST00000409306.5
ENST00000410083.6
ENST00000477269.5
CDS CAA 90 bp CCTTCTAAACAGGTGCAGGTGTATTCCCCGAGGCCGTCTTTACATTaGCCCTGGTTCTGGCAAGGACTGGTCTCACACTGGTCGCCATCT +
Preference number: 6 (lower is better)
Translates to: PSKQVQVYSPRPSLH*PWFWQGLVSHWSPS
Trigger: AGATGGCGACCAGTGTGAGACCAGTCCTTGCCAGAACCAGGGCAAATGTAAAGACGGCCTCGGGGAATACACCTGCACCTGTTTAGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375551.7
ENST00000375559.8
ENST00000409306.5
ENST00000410083.6
ENST00000477269.5
CDS CCA 72 bp TATTCCCCGAGGCCGTCTTTACATTTGCCCTGGTTCTaGCAAGGACTGGTCTCACACTGGTCGCCATCTTTG +
Preference number: 6 (lower is better)
Translates to: YSPRPSLHLPWF*QGLVSHWSPSL
Trigger: CAAAGATGGCGACCAGTGTGAGACCAGTCCTTGCCAGAACCAGGGCAAATGTAAAGACGGCCTCGGGGAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375551.7
ENST00000375559.8
ENST00000409306.5
ENST00000410083.6
ENST00000477269.5
CDS CAA 90 bp CACTCTCTTTCGAGGTGTCCTTTCTTCATCTCTTCAAGAAAGGAATaGGCCCTCGTGACCCTCGCCAGGATGTTGTTGGCCTGCTCCCTG +
Preference number: 6 (lower is better)
Translates to: HSLSRCPFFISSRKE*ALVTLARMLLACSL
Trigger: CAGGGAGCAGGCCAACAACATCCTGGCGAGGGTCACGAGGGCCAATTCCTTTCTTGAAGAGATGAAGAAAGGACACCTCGAAAGAGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000375551.7
ENST00000375559.8
ENST00000409306.5
ENST00000410083.6
ENST00000477269.5
ENST00000483537.1
CDS CAA 72 bp TTCTGTTCCTCGTGGCAGAACTGGTCACAGTCCCCGTaGTCCAGGCTGCAGAGCTTCCGTGTGAATAATTCA +
Preference number: 6 (lower is better)
Translates to: FCSSWQNWSQSP*SRLQSFRVNNS
Trigger: TGAATTATTCACACGGAAGCTCTGCAGCCTGGACAACGGGGACTGTGACCAGTTCTGCCACGAGGAACAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375551.7
ENST00000375559.8
ENST00000409306.5
ENST00000477269.5
CDS CAA 90 bp ACCACAGAGTTCTGTTCCTCGTGGCAGAACTGGTCACAGTCCCCGTaGTCCAGGCTGCAGAGCTTCCGTGTGAATAATTCACAGTTTTTG +
Preference number: 6 (lower is better)
Translates to: TTEFCSSWQNWSQSP*SRLQSFRVNNSQFL
Trigger: CAAAAACTGTGAATTATTCACACGGAAGCTCTGCAGCCTGGACAACGGGGACTGTGACCAGTTCTGCCACGAGGAACAGAACTCTGTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375551.7
ENST00000375559.8
ENST00000409306.5
ENST00000477269.5
CDS CCA 72 bp GGCCGTCTTTACATTTGCCCTGGTTCTGGCAAGGACTaGTCTCACACTGGTCGCCATCTTTGTATTTATTCC +
Preference number: 6 (lower is better)
Translates to: GRLYICPGSGKD*SHTGRHLCIYS
Trigger: GGAATAAATACAAAGATGGCGACCAGTGTGAGACCAGTCCTTGCCAGAACCAGGGCAAATGTAAAGACGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375551.7
ENST00000375559.8
ENST00000409306.5
ENST00000410083.6
ENST00000477269.5
CDS GCA 72 bp ATTCACAGTTTTTGCCTTCGAATCCTTCTAAACAGGTaGAGGTGTATTCCCCGAGGCCGTCTTTACATTTGC +
Preference number: 6 (lower is better)
Translates to: IHSFCLRILLNR*RCIPRGRLYIC
Trigger: GCAAATGTAAAGACGGCCTCGGGGAATACACCTGCACCTGTTTAGAAGGATTCGAAGGCAAAAACTGTGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000375551.7
ENST00000375559.8
ENST00000409306.5
ENST00000410083.6
ENST00000477269.5
CDS CAA 72 bp AGGCTGCAGAGCTTCCGTGTGAATAATTCACAGTTTTaGCCTTCGAATCCTTCTAAACAGGTGCAGGTGTAT +
Preference number: 6 (lower is better)
Translates to: RLQSFRVNNSQF*PSNPSKQVQVY
Trigger: ATACACCTGCACCTGTTTAGAAGGATTCGAAGGCAAAAACTGTGAATTATTCACACGGAAGCTCTGCAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375551.7
ENST00000375559.8
ENST00000409306.5
ENST00000477269.5
CDS CAA 72 bp CACAGTGCAAAGATCAACATGCATAATTCACAGTTTTaGCCTTCGAATCCTTCTAAACAGGTGCAGGTGTAT +
Preference number: 6 (lower is better)
Translates to: HSAKINMHNSQF*PSNPSKQVQVY
Trigger: ATACACCTGCACCTGTTTAGAAGGATTCGAAGGCAAAAACTGTGAATTATGCATGTTGATCTTTGCACTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410083.6
CDS GCA 72 bp ACAGTGCAAAGATCAACATGCATAATTCACAGTTTTTaGCTTCGAATCCTTCTAAACAGGTGCAGGTGTATT +
Preference number: 6 (lower is better)
Translates to: TVQRSTCIIHSF*LRILLNRCRCI
Trigger: AATACACCTGCACCTGTTTAGAAGGATTCGAAGGCAAAAACTGTGAATTATGCATGTTGATCTTTGCACTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410083.6