RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EZH1 (Homo sapiens)

Ensembl gene IDs: ENSG00000108799

Ensembl transcript IDs: ENST00000415827.6, ENST00000428826.7, ENST00000585455.1, ENST00000585550.5, ENST00000585893.5, ENST00000585912.5, ENST00000586089.5, ENST00000586103.5, ENST00000586382.5, ENST00000586714.1, ENST00000586867.5, ENST00000586935.5, ENST00000587179.1, ENST00000588239.5, ENST00000588897.5, ENST00000589846.1, ENST00000590078.5, ENST00000590082.1, ENST00000590783.5, ENST00000591330.5, ENST00000592492.5, ENST00000592743.5, ENST00000593214.5

Found 1024 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCGGATGCAGATTTCAGGATCATGCTGGGGCCTGGCCCATTTGGGTaGGAGGAGCTTTCTGTCAGGAGTTGCTGGGTGCGGGGTACGTGT +
Preference number: 1 (lower is better)
Translates to: ADADFRIMLGPGPFG*EELSVRSCWVRGTC
Trigger: ACACGTACCCCGCACCCAGCAACTCCTGACAGAAAGCTCCTCCCACCCAAATGGGCCAGGCCCCAGCATGATCCTGAAATCTGCATCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR GCA 90 bp AATGCCAGAGAGGGTGGCACCACAGCCTGGGACAGGTGGTCTACCTaGTTCTTCTCCCACTTCAGATACCCTCTGCCAGTGTGCCCTGCA +
Preference number: 1 (lower is better)
Translates to: NAREGGTTAWDRWST*FFSHFRYPLPVCPA
Trigger: TGCAGGGCACACTGGCAGAGGGTATCTGAAGTGGGAGAAGAAGCAGGTAGACCACCTGTCCCAGGCTGTGGTGCCACCCTCTCTGGCATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR GCA 90 bp CCCAGGCCAATCTATACCCGCCCACACCCTTTCTACTCAACATACTaGTCCTTGTTCCCAGCCAGCCCGGCACACCCACCATGGACACAG +
Preference number: 1 (lower is better)
Translates to: PRPIYTRPHPFYSTY*SLFPASPAHPPWTQ
Trigger: CTGTGTCCATGGTGGGTGTGCCGGGCTGGCTGGGAACAAGGAGCAGTATGTTGAGTAGAAAGGGTGTGGGCGGGTATAGATTGGCCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR TCA 90 bp CTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTaGGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGT +
Preference number: 1 (lower is better)
Translates to: LSVGDTVQETRAAVV*ARKPRQCRYHKCCR
Trigger: ACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
3UTR GCA 90 bp TCTCCCACTTCAGATACCCTCTGCCAGTGTGCCCTGCACACGGGGTaGCAGCCTAAACGCGTGCAATTTAGCCCCTCACCAACCTTGGAA +
Preference number: 1 (lower is better)
Translates to: SPTSDTLCQCALHTG*QPKRVQFSPSPTLE
Trigger: TTCCAAGGTTGGTGAGGGGCTAAATTGCACGCGTTTAGGCTGGCACCCCGTGTGCAGGGCACACTGGCAGAGGGTATCTGAAGTGGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR GCA 90 bp TACCTGCTTCTTCTCCCACTTCAGATACCCTCTGCCAGTGTGCCCTaGACACGGGGTGCCAGCCTAAACGCGTGCAATTTAGCCCCTCAC +
Preference number: 1 (lower is better)
Translates to: YLLLLPLQIPSASVP*TRGASLNACNLAPH
Trigger: GTGAGGGGCTAAATTGCACGCGTTTAGGCTGGCACCCCGTGTGCAGGGCACACTGGCAGAGGGTATCTGAAGTGGGAGAAGAAGCAGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR CCA 90 bp CTCTGCATGAATGCCAGAGAGGGTGGCACCACAGCCTGGGACAGGTaGTCTACCTGCTTCTTCTCCCACTTCAGATACCCTCTGCCAGTG +
Preference number: 1 (lower is better)
Translates to: LCMNAREGGTTAWDR*STCFFSHFRYPLPV
Trigger: CACTGGCAGAGGGTATCTGAAGTGGGAGAAGAAGCAGGTAGACCACCTGTCCCAGGCTGTGGTGCCACCCTCTCTGGCATTCATGCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR CCA 90 bp TGTGGAAGGAGTGCAGAGATTGCTCCCGCTGCACAGACTTGGCATTaGGGCCATCGATGTTGGGTGTGCACTGAGGGGGAAGTGCATTGG +
Preference number: 1 (lower is better)
Translates to: CGRSAEIAPAAQTWH*GHRCWVCTEGEVHW
Trigger: CCAATGCACTTCCCCCTCAGTGCACACCCAACATCGATGGCCCCAATGCCAAGTCTGTGCAGCGGGAGCAATCTCTGCACTCCTTCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
3UTR CCA 90 bp CACAGGCTCCGAGGGTGCTTCCACTACGCAGAGTTGAGGTGGGGCTaGACTAGCCTTCTGTTTTGTGGGAGTCTGACAGCGAGAGTTAGC +
Preference number: 1 (lower is better)
Translates to: HRLRGCFHYAELRWG*TSLLFCGSLTARVS
Trigger: GCTAACTCTCGCTGTCAGACTCCCACAAAACAGAAGGCTAGTCCAGCCCCACCTCAACTCTGCGTAGTGGAAGCACCCTCGGAGCCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586935.5
ENST00000588239.5
ENST00000588897.5
3UTR CCA 90 bp CCATTCCACAGGCTCCGAGGGTGCTTCCACTACGCAGAGTTGAGGTaGGGCTGGACTAGCCTTCTGTTTTGTGGGAGTCTGACAGCGAGA +
Preference number: 1 (lower is better)
Translates to: PFHRLRGCFHYAELR*GWTSLLFCGSLTAR
Trigger: TCTCGCTGTCAGACTCCCACAAAACAGAAGGCTAGTCCAGCCCCACCTCAACTCTGCGTAGTGGAAGCACCCTCGGAGCCTGTGGAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586935.5
ENST00000588239.5
ENST00000588897.5
3UTR CCA 90 bp AGCGCTTGTTGGGAACTGCCTAAGTTGATTCCTGAGGCCACAGCCTaGGGAGCCGACACGAAATCACGCATAAGTCATCCACCCCAGCCT +
Preference number: 1 (lower is better)
Translates to: SACWELPKLIPEATA*GADTKSRISHPPQP
Trigger: AGGCTGGGGTGGATGACTTATGCGTGATTTCGTGTCGGCTCCCCAGGCTGTGGCCTCAGGAATCAACTTAGGCAGTTCCCAACAAGCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR CCA 90 bp AAAGTGTGTGGAAGGAGTGCAGAGATTGCTCCCGCTGCACAGACTTaGCATTGGGGCCATCGATGTTGGGTGTGCACTGAGGGGGAAGTG +
Preference number: 1 (lower is better)
Translates to: KVCGRSAEIAPAAQT*HWGHRCWVCTEGEV
Trigger: CACTTCCCCCTCAGTGCACACCCAACATCGATGGCCCCAATGCCAAGTCTGTGCAGCGGGAGCAATCTCTGCACTCCTTCCACACACTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
3UTR TCA 90 bp CACCAATCTTTCTCCTCTCTAGTCCAAGCCTGTGCCCACCTACCCTaGAGCGATAAGCAACACTGGCCATTGGGCCTTGCCTCTATGGGG +
Preference number: 1 (lower is better)
Translates to: HQSFSSLVQACAHLP*SDKQHWPLGLASMG
Trigger: CCCCATAGAGGCAAGGCCCAATGGCCAGTGTTGCTTATCGCTTCAGGGTAGGTGGGCACAGGCTTGGACTAGAGAGGAGAAAGATTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR CCA 90 bp GGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTaGTGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCT +
Preference number: 1 (lower is better)
Translates to: GFSVWETQCRRLEQQ*CEHESQDSAATISA
Trigger: AGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
3UTR CCA 90 bp AAGCCTGTGCCCACCTACCCTGAAGCGATAAGCAACACTGGCCATTaGGCCTTGCCTCTATGGGGAATGGAAGGCCTGAAAACACCCACA +
Preference number: 1 (lower is better)
Translates to: KPVPTYPEAISNTGH*ALPLWGMEGLKTPT
Trigger: TGTGGGTGTTTTCAGGCCTTCCATTCCCCATAGAGGCAAGGCCCAATGGCCAGTGTTGCTTATCGCTTCAGGGTAGGTGGGCACAGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR CCA 90 bp AATACAAACCACGGCGGATGCAGATTTCAGGATCATGCTGGGGCCTaGCCCATTTGGGTGGGAGGAGCTTTCTGTCAGGAGTTGCTGGGT +
Preference number: 1 (lower is better)
Translates to: NTNHGGCRFQDHAGA*PIWVGGAFCQELLG
Trigger: ACCCAGCAACTCCTGACAGAAAGCTCCTCCCACCCAAATGGGCCAGGCCCCAGCATGATCCTGAAATCTGCATCCGCCGTGGTTTGTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR CCA 90 bp ATTCTGAGTCATGATGCAGGGGCAGGTGCTGTCACAGGGGCGGTCTaGGTGGTCGCAGGGTTGGTAGTTGTACACTTGTGTGGAAGAGTT +
Preference number: 1 (lower is better)
Translates to: ILSHDAGAGAVTGAV*VVAGLVVVHLCGRV
Trigger: AACTCTTCCACACAAGTGTACAACTACCAACCCTGCGACCACCCAGACCGCCCCTGTGACAGCACCTGCCCCTGCATCATGACTCAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588897.5
3UTR CCA 90 bp TACCCTGAAGCGATAAGCAACACTGGCCATTGGGCCTTGCCTCTATaGGGAATGGAAGGCCTGAAAACACCCACAAATCCAGCGAGCCAG +
Preference number: 1 (lower is better)
Translates to: YPEAISNTGHWALPL*GMEGLKTPTNPASQ
Trigger: CTGGCTCGCTGGATTTGTGGGTGTTTTCAGGCCTTCCATTCCCCATAGAGGCAAGGCCCAATGGCCAGTGTTGCTTATCGCTTCAGGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR TCA 90 bp GAAAGCTACAATTACAGGCTAGCGCTTGTTGGGAACTGCCTAAGTTaGTTCCTGAGGCCACAGCCTGGGGAGCCGACACGAAATCACGCA +
Preference number: 1 (lower is better)
Translates to: ESYNYRLALVGNCLS*FLRPQPGEPTRNHA
Trigger: TGCGTGATTTCGTGTCGGCTCCCCAGGCTGTGGCCTCAGGAATCAACTTAGGCAGTTCCCAACAAGCGCTAGCCTGTAATTGTAGCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR GCA 90 bp CTGGCTAAGGAAGGATGGCGTAGCTTTCCTTCCCCCAGCCTTGAATaGCTGTACTTAGAACCCACACTCTTTCAGTTTGAGCCCTGCCAC +
Preference number: 1 (lower is better)
Translates to: LAKEGWRSFPSPSLE*LYLEPTLFQFEPCH
Trigger: GTGGCAGGGCTCAAACTGAAAGAGTGTGGGTTCTAAGTACAGGCATTCAAGGCTGGGGGAAGGAAAGCTACGCCATCCTTCCTTAGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR GCA 90 bp TTGAGGGTATCCCTGATATGCACAATGAATACAAACCACGGCGGATaGAGATTTCAGGATCATGCTGGGGCCTGGCCCATTTGGGTGGGA +
Preference number: 1 (lower is better)
Translates to: LRVSLICTMNTNHGG*RFQDHAGAWPIWVG
Trigger: TCCCACCCAAATGGGCCAGGCCCCAGCATGATCCTGAAATCTGCATCCGCCGTGGTTTGTATTCATTGTGCATATCAGGGATACCCTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR CCA 90 bp CATTGGGGCCATCGATGTTGGGTGTGCACTGAGGGGGAAGTGCATTaGGGTCTGACATCTCTGTTAGTTCTCGATACCTCTCCTTCATGT +
Preference number: 1 (lower is better)
Translates to: HWGHRCWVCTEGEVH*GLTSLLVLDTSPSC
Trigger: ACATGAAGGAGAGGTATCGAGAACTAACAGAGATGTCAGACCCCAATGCACTTCCCCCTCAGTGCACACCCAACATCGATGGCCCCAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
3UTR GCA 90 bp CTTGAATGCCTGTACTTAGAACCCACACTCTTTCAGTTTGAGCCCTaGCACGAGGGAGGAGGTAGTAAGGTGACCTGTCTACCTCTGAGT +
Preference number: 1 (lower is better)
Translates to: LECLYLEPTLFQFEP*HEGGGSKVTCLPLS
Trigger: ACTCAGAGGTAGACAGGTCACCTTACTACCTCCTCCCTCGTGGCAGGGCTCAAACTGAAAGAGTGTGGGTTCTAAGTACAGGCATTCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR GCA 90 bp GGTCACATTCTCGCACTGCCAGATAGCAAGGACATTGCTTGGTATTaGACTGGGTCTTACAGCGACAGCCAGGGAAACGATTCTGACAGT +
Preference number: 1 (lower is better)
Translates to: GHILALPDSKDIAWY*TGSYSDSQGNDSDS
Trigger: ACTGTCAGAATCGTTTCCCTGGCTGTCGCTGTAAGACCCAGTGCAATACCAAGCAATGTCCTTGCTATCTGGCAGTGCGAGAATGTGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588897.5
3UTR CCA 90 bp TCAAAGCCTCCTGGGCCCAAGCTTAGCAGTTTAACTACTATCATCTaGCTGGTTCTCCCTCTCTGGCTAAGGAAGGATGGCGTAGCTTTC +
Preference number: 1 (lower is better)
Translates to: SKPPGPKLSSLTTII*LVLPLWLRKDGVAF
Trigger: GAAAGCTACGCCATCCTTCCTTAGCCAGAGAGGGAGAACCAGCCAGATGATAGTAGTTAAACTGCTAAGCTTGGGCCCAGGAGGCTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR TCA 90 bp AGGGACAAAGGATGGGAAACTGGAGGAACAGGAGTATTCATGAACTaGAGCTGGGACAGGAGACTGACCACAGTGATTCTGCTCACTGAA +
Preference number: 1 (lower is better)
Translates to: RDKGWETGGTGVFMN*SWDRRLTTVILLTE
Trigger: TTCAGTGAGCAGAATCACTGTGGTCAGTCTCCTGTCCCAGCTTCAGTTCATGAATACTCCTGTTCCTCCAGTTTCCCATCCTTTGTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR TCA 90 bp CCATCTGAGGTGTCATTGTGCCCTTCCTCCTCCTCATCTGAGTACTaGTTCAGGGCATCGACCAACTCCAGAAAAACAGCATCACTAATC +
Preference number: 1 (lower is better)
Translates to: PSEVSLCPSSSSSEY*FRASTNSRKTASLI
Trigger: GATTAGTGATGCTGTTTTTCTGGAGTTGGTCGATGCCCTGAATCAGTACTCAGATGAGGAGGAGGAAGGGCACAATGACACCTCAGATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
3UTR TCA 90 bp TGCACGTCTTGGTCCCCAGAAGCCTGGCTATTGAACAGAAGTTGTTaGAGTAGGTGCCATGGAAGACTCGAAAAAGAGATTCTTCAGCCC +
Preference number: 1 (lower is better)
Translates to: CTSWSPEAWLLNRSC*SRCHGRLEKEILQP
Trigger: GGGCTGAAGAATCTCTTTTTCGAGTCTTCCATGGCACCTACTTCAACAACTTCTGTTCAATAGCCAGGCTTCTGGGGACCAAGACGTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588239.5
ENST00000588897.5
3UTR TCA 90 bp CTGAAAGACCTGCTTGCACGTCTTGGTCCCCAGAAGCCTGGCTATTaGACAGAAGTTGTTGAAGTAGGTGCCATGGAAGACTCGAAAAAG +
Preference number: 1 (lower is better)
Translates to: LKDLLARLGPQKPGY*TEVVEVGAMEDSKK
Trigger: CTTTTTCGAGTCTTCCATGGCACCTACTTCAACAACTTCTGTTCAATAGCCAGGCTTCTGGGGACCAAGACGTGCAAGCAGGTCTTTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588239.5
ENST00000588897.5
3UTR CCA 90 bp AAGCTTAGCAGTTTAACTACTATCATCTGGCTGGTTCTCCCTCTCTaGCTAAGGAAGGATGGCGTAGCTTTCCTTCCCCCAGCCTTGAAT +
Preference number: 1 (lower is better)
Translates to: KLSSLTTIIWLVLPL*LRKDGVAFLPPALN
Trigger: ATTCAAGGCTGGGGGAAGGAAAGCTACGCCATCCTTCCTTAGCCAGAGAGGGAGAACCAGCCAGATGATAGTAGTTAAACTGCTAAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR TCA 90 bp AGAACTTTGGAGGAGCTGGAGCACTGGTGTCTGTTCCCAGGAATCTaGAAACACTTCTCCATCTATCTCCAGAGTACACAGAGAAGGCTT +
Preference number: 1 (lower is better)
Translates to: RTLEELEHWCLFPGI*KHFSIYLQSTQRRL
Trigger: AAGCCTTCTCTGTGTACTCTGGAGATAGATGGAGAAGTGTTTTCAGATTCCTGGGAACAGACACCAGTGCTCCAGCTCCTCCAAAGTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR GCA 90 bp ACTTCACTTAGCCTGTCCTCTCCAGGTCTTAGGACCACAGAGGTTTaGCTGCATCCCAATAACATAAGGACTCTTGATGTGGAAAGCTAC +
Preference number: 1 (lower is better)
Translates to: TSLSLSSPGLRTTEV*LHPNNIRTLDVESY
Trigger: GTAGCTTTCCACATCAAGAGTCCTTATGTTATTGGGATGCAGGCAAACCTCTGTGGTCCTAAGACCTGGAGAGGACAGGCTAAGTGAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR TCA 90 bp ATACCTCTCCTTCATGTCATCTGGGACACCATTCTCAGGGAACATTaGGGCAATTGCACTGAAGATCATGTCATTTGGGAACTGTTTCTT +
Preference number: 1 (lower is better)
Translates to: IPLLHVIWDTILREH*GNCTEDHVIWELFL
Trigger: AAGAAACAGTTCCCAAATGACATGATCTTCAGTGCAATTGCCTCAATGTTCCCTGAGAATGGTGTCCCAGATGACATGAAGGAGAGGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
3UTR TCA 90 bp TGTCATCTGGGACACCATTCTCAGGGAACATTGAGGCAATTGCACTaGAGATCATGTCATTTGGGAACTGTTTCTTGGAACTCTTTTTGT +
Preference number: 1 (lower is better)
Translates to: CHLGHHSQGTLRQLH*RSCHLGTVSWNSFC
Trigger: ACAAAAAGAGTTCCAAGAAACAGTTCCCAAATGACATGATCTTCAGTGCAATTGCCTCAATGTTCCCTGAGAATGGTGTCCCAGATGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
3UTR-3UTR GCA 90 bp TTCTGTCAGGAGTTGCTGGGTGCGGGGTACGTGTGTGCCCTCCAGTGTGGTGAGTCTGCCAGTGTGCCCTaGACACGGGGTGCCAGCCTA +
Preference number: 2 (lower is better)
Translates to: FCQELLGAGYVCALQCGESASVP*TRGASL
Trigger: TAGGCTGGCACCCCGTGTGCAGGGCACACTGGCAGA...CTCACCACACTGGAGGGCACACACGTACCCCGCACCCAGCAACTCCTGACAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR CAA 90 bp CCACGGCGGATGCAGATTTCAGGATCATGCTGGGGCCTGGCCCATTaGGGTGGGAGGAGCTTTCTGTCAGGAGTTGCTGGGTGCGGGGTA +
Preference number: 2 (lower is better)
Translates to: PRRMQISGSCWGLAH*GGRSFLSGVAGCGV
Trigger: TACCCCGCACCCAGCAACTCCTGACAGAAAGCTCCTCCCACCCAAATGGGCCAGGCCCCAGCATGATCCTGAAATCTGCATCCGCCGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR-3UTR TCA 90 bp CCATTCCACAGGCTCCGAGGGTGCTTCCACTACGCAGAGTTGAGGTGGGGCTGGCGAGCAGCAGTGGTGTaGGCACGAAAGCCAAGACAG +
Preference number: 2 (lower is better)
Translates to: PFHRLRGCFHYAELRWGWRAAVV*ARKPRQ
Trigger: CTGTCTTGGCTTTCGTGCTCACACCACTGCTGCTCG...CCAGCCCCACCTCAACTCTGCGTAGTGGAAGCACCCTCGGAGCCTGTGGAATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588897.5
3UTR-3UTR GCA 90 bp CTTCAGATACCCTCTGCCAGTGTGCCCTGCACACGGGGTGCCAGCCTAAACGCGTCTGAGTTCAGTCTGTaGTGCCTGCCAGGCTCGCCT +
Preference number: 2 (lower is better)
Translates to: LQIPSASVPCTRGASLNASEFSL*CLPGSP
Trigger: AGGCGAGCCTGGCAGGCAGCACAGACTGAACTCAGA...CGCGTTTAGGCTGGCACCCCGTGTGCAGGGCACACTGGCAGAGGGTATCTGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR-3UTR TCA 90 bp TTCTGTCAGGAGTTGCTGGGTGCGGGGTACGTGTGTGCCCTCCAGTGTGGTGAGCGAGCAGCAGTGGTGTaGGCACGAAAGCCAAGACAG +
Preference number: 2 (lower is better)
Translates to: FCQELLGAGYVCALQCGERAAVV*ARKPRQ
Trigger: CTGTCTTGGCTTTCGTGCTCACACCACTGCTGCTCG...CTCACCACACTGGAGGGCACACACGTACCCCGCACCCAGCAACTCCTGACAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR-3UTR GCA 90 bp GAAGGGAGAAGCCTGCTCCCTACTGTAACACTCCCAGGCCAATCTATACCCGCCTGCCGCTACCATAAGTaGTGCCGTGGGGCCTGGGAG +
Preference number: 2 (lower is better)
Translates to: EGRSLLPTVTLPGQSIPACRYHK*CRGAWE
Trigger: CTCCCAGGCCCCACGGCAGCACTTATGGTAGCGGCA...GGCGGGTATAGATTGGCCTGGGAGTGTTACAGTAGGGAGCAGGCTTCTCCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR-3UTR GCA 90 bp TGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAAGCCAATGCCGCTACCATAAGTaGTGCCGTGGGGCCTGGGAG +
Preference number: 2 (lower is better)
Translates to: WETQCRRLEQQWCEHESQCRYHK*CRGAWE
Trigger: CTCCCAGGCCCCACGGCAGCACTTATGGTAGCGGCA...TTGGCTTTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
3UTR-3UTR GCA 90 bp GTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCTGCCGCTACCATAAGTaGTGCCGTGGGGCCTGGGAG +
Preference number: 2 (lower is better)
Translates to: VSQCGRHSAGDSSSSGVSCRYHK*CRGAWE
Trigger: CTCCCAGGCCCCACGGCAGCACTTATGGTAGCGGCA...GCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
3UTR-3UTR GCA 90 bp ACAAACCACGGCGGATGCAGATTTCAGGATCATGCTGGGGCCTGGCCCATTTGGGCCCTGCACACGGGGTaGCAGCCTAAACGCGTGCAA +
Preference number: 2 (lower is better)
Translates to: TNHGGCRFQDHAGAWPIWALHTG*QPKRVQ
Trigger: TTGCACGCGTTTAGGCTGGCACCCCGTGTGCAGGGC...CCAAATGGGCCAGGCCCCAGCATGATCCTGAAATCTGCATCCGCCGTGGTTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR-3UTR GCA 90 bp GAGAAGCCTGCTCCCTACTGTAACACTCCCAGGCCAATCTATACCCGCCCACACGCCCTGCACACGGGGTaGCAGCCTAAACGCGTGCAA +
Preference number: 2 (lower is better)
Translates to: EKPAPYCNTPRPIYTRPHALHTG*QPKRVQ
Trigger: TTGCACGCGTTTAGGCTGGCACCCCGTGTGCAGGGC...GTGTGGGCGGGTATAGATTGGCCTGGGAGTGTTACAGTAGGGAGCAGGCTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR CAA 90 bp CCAATCTATACCCGCCCACACCCTTTCTACTCAACATACTGCTCCTaGTTCCCAGCCAGCCCGGCACACCCACCATGGACACAGGGCAGC +
Preference number: 2 (lower is better)
Translates to: PIYTRPHPFYSTYCS*FPASPAHPPWTQGS
Trigger: GCTGCCCTGTGTCCATGGTGGGTGTGCCGGGCTGGCTGGGAACAAGGAGCAGTATGTTGAGTAGAAAGGGTGTGGGCGGGTATAGATTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR CAA 90 bp GAAGCACTGACTATGTGGTGCCTTCTCCGGCGACGACCAGAGCACTaGGAGCGGGGGTTGTGGAGCATGGCATACTCCTTTGCTCCTTCC +
Preference number: 2 (lower is better)
Translates to: EALTMWCLLRRRPEH*ERGLWSMAYSFAPS
Trigger: GGAAGGAGCAAAGGAGTATGCCATGCTCCACAACCCCCGCTCCAAGTGCTCTGGTCGTCGCCGGAGAAGGCACCACATAGTCAGTGCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588239.5
ENST00000588897.5
3UTR-3UTR GCA 90 bp CTTCAGCCCCAGTCCATTCCACAGGCTCCGAGGGTGCTTCCACTACGCAGAGTTGTGTGGGAGACACAGTaGAGGAGACTCGAGCAGCAG +
Preference number: 2 (lower is better)
Translates to: LQPQSIPQAPRVLPLRRVVWETQ*RRLEQQ
Trigger: CTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACAC...AACTCTGCGTAGTGGAAGCACCCTCGGAGCCTGTGGAATGGACTGGGGCTGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588897.5
3UTR-3UTR GCA 90 bp GGTGGGAGGAGCTTTCTGTCAGGAGTTGCTGGGTGCGGGGTACGTGTGTGCCCTTTTCAGTTTGAGCCCTaGCACGAGGGAGGAGGTAGT +
Preference number: 2 (lower is better)
Translates to: GGRSFLSGVAGCGVRVCPFQFEP*HEGGGS
Trigger: ACTACCTCCTCCCTCGTGGCAGGGCTCAAACTGAAA...AGGGCACACACGTACCCCGCACCCAGCAACTCCTGACAGAAAGCTCCTCCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR-3UTR CCA 90 bp GAGAAGCCTGCTCCCTACTGTAACACTCCCAGGCCAATCTATACCCGCCCACACGAATGCCAGAGAGGGTaGCACCACAGCCTGGGACAG +
Preference number: 2 (lower is better)
Translates to: EKPAPYCNTPRPIYTRPHECQRG*HHSLGQ
Trigger: CTGTCCCAGGCTGTGGTGCCACCCTCTCTGGCATTC...GTGTGGGCGGGTATAGATTGGCCTGGGAGTGTTACAGTAGGGAGCAGGCTTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR CAA 90 bp ATGTGGTGCCTTCTCCGGCGACGACCAGAGCACTTGGAGCGGGGGTaGTGGAGCATGGCATACTCCTTTGCTCCTTCCAGCAAAAGGAAG +
Preference number: 2 (lower is better)
Translates to: MWCLLRRRPEHLERG*WSMAYSFAPSSKRK
Trigger: CTTCCTTTTGCTGGAAGGAGCAAAGGAGTATGCCATGCTCCACAACCCCCGCTCCAAGTGCTCTGGTCGTCGCCGGAGAAGGCACCACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588239.5
ENST00000588897.5
3UTR CAA 90 bp CCCAGTCCATTCCACAGGCTCCGAGGGTGCTTCCACTACGCAGAGTaGAGGTGGGGCTGGACTAGCCTTCTGTTTTGTGGGAGTCTGACA +
Preference number: 2 (lower is better)
Translates to: PSPFHRLRGCFHYAE*RWGWTSLLFCGSLT
Trigger: TGTCAGACTCCCACAAAACAGAAGGCTAGTCCAGCCCCACCTCAACTCTGCGTAGTGGAAGCACCCTCGGAGCCTGTGGAATGGACTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586935.5
ENST00000588239.5
ENST00000588897.5
3UTR-3UTR TCA 90 bp GGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGGAAGAAGCGGGGCTCTaGGTCCCAGAAAGAAGGGAG +
Preference number: 2 (lower is better)
Translates to: GFSVWETQCRRLEQQWCEEEAGL*VPERRE
Trigger: CTCCCTTCTTTCTGGGACTCAGAGCCCCGCTTCTTC...CTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR-3UTR TCA 90 bp CCATTCCACAGGCTCCGAGGGTGCTTCCACTACGCAGAGTTGAGGTGGGGCTGGTCCTCATCTGAGTACTaGTTCAGGGCATCGACCAAC +
Preference number: 2 (lower is better)
Translates to: PFHRLRGCFHYAELRWGWSSSEY*FRASTN
Trigger: GTTGGTCGATGCCCTGAATCAGTACTCAGATGAGGA...CCAGCCCCACCTCAACTCTGCGTAGTGGAAGCACCCTCGGAGCCTGTGGAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588897.5
3UTR-3UTR GCA 90 bp GGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGGTGTGGGAGACACAGTaGAGGAGACTCGAGCAGCAG +
Preference number: 2 (lower is better)
Translates to: GFSVWETQCRRLEQQWCEVWETQ*RRLEQQ
Trigger: CTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACAC...CTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
3UTR-3UTR GCA 90 bp CCTGGGACAGGTGGTCTACCTGCTTCTTCTCCCACTTCAGATACCCTCTGCCAGTCCAGCGAGCCAGGATaGTCACACCTGCCAGGCATA +
Preference number: 2 (lower is better)
Translates to: PGTGGLPASSPTSDTLCQSSEPG*SHLPGI
Trigger: TATGCCTGGCAGGTGTGAGCATCCTGGCTCGCTGGA...CTGGCAGAGGGTATCTGAAGTGGGAGAAGAAGCAGGTAGACCACCTGTCCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR-3UTR GCA 90 bp GGTCTCCCTCTCGATCCCCACGTACTTGAGAGCATCAGCTTGGCTGTACCTGTAACCTTGCAGTCCCAGTaGTCTGAGGCCCCACAGGTG +
Preference number: 2 (lower is better)
Translates to: GLPLDPHVLESISLAVPVTLQSQ*SEAPQV
Trigger: CACCTGTGGGGCCTCAGAGCACTGGGACTGCAAGGT...TACAGGTACAGCCAAGCTGATGCTCTCAAGTACGTGGGGATCGAGAGGGAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588897.5
3UTR-3UTR CCA 90 bp TGCCAGAGAGGGTGGCACCACAGCCTGGGACAGGTGGTCTACCTGCTTCTTCTCAGACTCGAGCAGCAGTaGTGTGAGCACGAAAGCCAA +
Preference number: 2 (lower is better)
Translates to: CQRGWHHSLGQVVYLLLLRLEQQ*CEHESQ
Trigger: TTGGCTTTCGTGCTCACACCACTGCTGCTCGAGTCT...GAGAAGAAGCAGGTAGACCACCTGTCCCAGGCTGTGGTGCCACCCTCTCTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR-3UTR CCA 90 bp GGCATTGGAGCAGGAAGCACTGACTATGTGGTGCCTTCTCCGGCGACGACCAGAGGGGGTTTCTCAGTGTaGGAGACACAGTGCAGGAGA +
Preference number: 2 (lower is better)
Translates to: GIGAGSTDYVVPSPATTRGGFSV*ETQCRR
Trigger: TCTCCTGCACTGTGTCTCCCACACTGAGAAACCCCC...TCTGGTCGTCGCCGGAGAAGGCACCACATAGTCAGTGCTTCCTGCTCCAATGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588897.5
3UTR-3UTR CCA 90 bp GCCTGGGACAGGTGGTCTACCTGCTTCTTCTCCCACTTCAGATACCCTCTGCCAACAGAGGGAGTGGGTTaGGGGGTTTCTCAGTGTGGG +
Preference number: 2 (lower is better)
Translates to: AWDRWSTCFFSHFRYPLPTEGVG*GVSQCG
Trigger: CCCACACTGAGAAACCCCCCAACCCACTCCCTCTGT...TGGCAGAGGGTATCTGAAGTGGGAGAAGAAGCAGGTAGACCACCTGTCCCAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR-3UTR CCA 90 bp TGCCAGAGAGGGTGGCACCACAGCCTGGGACAGGTGGTCTACCTGCTTCTTCTCAGCGATAAGCAACACTaGCCATTGGGCCTTGCCTCT +
Preference number: 2 (lower is better)
Translates to: CQRGWHHSLGQVVYLLLLSDKQH*PLGLAS
Trigger: AGAGGCAAGGCCCAATGGCCAGTGTTGCTTATCGCT...GAGAAGAAGCAGGTAGACCACCTGTCCCAGGCTGTGGTGCCACCCTCTCTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR CAA 90 bp GCAGGGGCAGGTGCTGTCACAGGGGCGGTCTGGGTGGTCGCAGGGTaGGTAGTTGTACACTTGTGTGGAAGAGTTATCTTTCTTCAGCTG +
Preference number: 2 (lower is better)
Translates to: AGAGAVTGAVWVVAG*VVVHLCGRVIFLQL
Trigger: CAGCTGAAGAAAGATAACTCTTCCACACAAGTGTACAACTACCAACCCTGCGACCACCCAGACCGCCCCTGTGACAGCACCTGCCCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588239.5
ENST00000588897.5
3UTR-3UTR TCA 90 bp GCCTCTATGGGGAATGGAAGGCCTGAAAACACCCACAAATCCAGCGAGCCAGGACGAGCAGCAGTGGTGTaGGCACGAAAGCCAAGACAG +
Preference number: 2 (lower is better)
Translates to: ASMGNGRPENTHKSSEPGRAAVV*ARKPRQ
Trigger: CTGTCTTGGCTTTCGTGCTCACACCACTGCTGCTCG...TCCTGGCTCGCTGGATTTGTGGGTGTTTTCAGGCCTTCCATTCCCCATAGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR-3UTR TCA 90 bp AGTCTGTGCTGCCTGCCAGGCTCGCCTCTAACCCAGACCACTTGTAGGCTCCAGTGTCTCCCCTCTCATTaGGACAGTTTTGTGCCCTCT +
Preference number: 2 (lower is better)
Translates to: SLCCLPGSPLTQTTCRLQCLPSH*DSFVPS
Trigger: AGAGGGCACAAAACTGTCTCAATGAGAGGGGAGACA...CTGGAGCCTACAAGTGGTCTGGGTTAGAGGCGAGCCTGGCAGGCAGCACAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR-3UTR TCA 90 bp GCCTGGGACAGGTGGTCTACCTGCTTCTTCTCCCACTTCAGATACCCTCTGCCATGTGCCCACCTACCCTaGAGCGATAAGCAACACTGG +
Preference number: 2 (lower is better)
Translates to: AWDRWSTCFFSHFRYPLPCAHLP*SDKQHW
Trigger: CCAGTGTTGCTTATCGCTTCAGGGTAGGTGGGCACA...TGGCAGAGGGTATCTGAAGTGGGAGAAGAAGCAGGTAGACCACCTGTCCCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR-3UTR TCA 90 bp GGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGTGTGCCCACCTACCCTaGAGCGATAAGCAACACTGG +
Preference number: 2 (lower is better)
Translates to: GFSVWETQCRRLEQQWCECAHLP*SDKQHW
Trigger: CCAGTGTTGCTTATCGCTTCAGGGTAGGTGGGCACA...CTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR-3UTR TCA 90 bp ACAAACCACGGCGGATGCAGATTTCAGGATCATGCTGGGGCCTGGCCCATTTGGTGCCCTCCAGTGTGGTaGGTGAGAGCATGTGAGTGT +
Preference number: 2 (lower is better)
Translates to: TNHGGCRFQDHAGAWPIWCPPVW*VRACEC
Trigger: ACACTCACATGCTCTCACTCACCACACTGGAGGGCA...CCAAATGGGCCAGGCCCCAGCATGATCCTGAAATCTGCATCCGCCGTGGTTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR-3UTR GCA 90 bp CCTACTGTAACACTCCCAGGCCAATCTATACCCGCCCACACCCTTTCTACTCAATGCCGCTACCATAAGTaGTGCCGTGGGGCCTGGGAG +
Preference number: 2 (lower is better)
Translates to: PTVTLPGQSIPAHTLSTQCRYHK*CRGAWE
Trigger: CTCCCAGGCCCCACGGCAGCACTTATGGTAGCGGCA...TTGAGTAGAAAGGGTGTGGGCGGGTATAGATTGGCCTGGGAGTGTTACAGTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR-3UTR GCA 90 bp GGGGGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTCGAAAGCCAAGACAGTaGCGCTACCATAAGTGCTGC +
Preference number: 2 (lower is better)
Translates to: GGFSVWETQCRRLEQQWCRKPRQ*RYHKCC
Trigger: GCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCG...ACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
3UTR-3UTR GCA 90 bp GCCTCTATGGGGAATGGAAGGCCTGAAAACACCCACAAATCCAGCGAGCCAGGAGAGTTCAGTCTGTGCTaGCTGCCAGGCTCGCCTCTA +
Preference number: 2 (lower is better)
Translates to: ASMGNGRPENTHKSSEPGEFSLC*LPGSPL
Trigger: TAGAGGCGAGCCTGGCAGGCAGCACAGACTGAACTC...TCCTGGCTCGCTGGATTTGTGGGTGTTTTCAGGCCTTCCATTCCCCATAGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR-3UTR GCA 90 bp TTCTGTCAGGAGTTGCTGGGTGCGGGGTACGTGTGTGCCCTCCAGTGTGGTGAGTCCCCCAGCCTTGAATaGCTGTACTTAGAACCCACA +
Preference number: 2 (lower is better)
Translates to: FCQELLGAGYVCALQCGESPSLE*LYLEPT
Trigger: TGTGGGTTCTAAGTACAGGCATTCAAGGCTGGGGGA...CTCACCACACTGGAGGGCACACACGTACCCCGCACCCAGCAACTCCTGACAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR-3UTR GCA 90 bp GGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGTCTAGTCCAAGCCTGTaGCCACCTACCCTGAAGCGA +
Preference number: 2 (lower is better)
Translates to: GFSVWETQCRRLEQQWCESSPSL*PPTLKR
Trigger: TCGCTTCAGGGTAGGTGGGCACAGGCTTGGACTAGA...CTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR-3UTR GCA 90 bp TTTATTGGCAATGAAGCCGCATGTATACCAGGCTCCCCTAGTCCCCACCACCTTTCTGCCAGTGTGCCCTaGACACGGGGTGCCAGCCTA +
Preference number: 2 (lower is better)
Translates to: FIGNEAACIPGSPSPHHLSASVP*TRGASL
Trigger: TAGGCTGGCACCCCGTGTGCAGGGCACACTGGCAGA...AAGGTGGTGGGGACTAGGGGAGCCTGGTATACATGCGGCTTCATTGCCAATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR-3UTR GCA 90 bp AGGGGCGGTCTGGGTGGTCGCAGGGTTGGTAGTTGTACACTTGTGTGGAAGAGTAGTGTGTGGAAGGAGTaGAGAGATTGCTCCCGCTGC +
Preference number: 2 (lower is better)
Translates to: RGGLGGRRVGSCTLVWKSSVWKE*RDCSRC
Trigger: GCAGCGGGAGCAATCTCTGCACTCCTTCCACACACT...ACTCTTCCACACAAGTGTACAACTACCAACCCTGCGACCACCCAGACCGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588897.5
3UTR-3UTR CCA 90 bp GGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGGGGGGTTTCTCAGTGTaGGAGACACAGTGCAGGAGA +
Preference number: 2 (lower is better)
Translates to: GFSVWETQCRRLEQQWCEGGFSV*ETQCRR
Trigger: TCTCCTGCACTGTGTCTCCCACACTGAGAAACCCCC...CTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
3UTR-3UTR CCA 90 bp TCTGTCTCCCCTCTCATTGAGACAGTTTTGTGCCCTCTGGACATGGCAGAGGCCACAGAGGGAGTGGGTTaGGGGGTTTCTCAGTGTGGG +
Preference number: 2 (lower is better)
Translates to: SVSPLIETVLCPLDMAEATEGVG*GVSQCG
Trigger: CCCACACTGAGAAACCCCCCAACCCACTCCCTCTGT...GGCCTCTGCCATGTCCAGAGGGCACAAAACTGTCTCAATGAGAGGGGAGACAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000592743.5
3UTR-3UTR CCA 90 bp GGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGAGCAACACTGGCCATTaGGCCTTGCCTCTATGGGGA +
Preference number: 2 (lower is better)
Translates to: GFSVWETQCRRLEQQWCESNTGH*ALPLWG
Trigger: TCCCCATAGAGGCAAGGCCCAATGGCCAGTGTTGCT...CTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR CAA 90 bp TCACTGTCTCCTTCTTTAGTCTCAGCCACAGCAGAGGCTGAGGCATaGGAGCAGGAAGCACTGACTATGTGGTGCCTTCTCCGGCGACGA +
Preference number: 2 (lower is better)
Translates to: SLSPSLVSATAEAEA*EQEALTMWCLLRRR
Trigger: TCGTCGCCGGAGAAGGCACCACATAGTCAGTGCTTCCTGCTCCAATGCCTCAGCCTCTGCTGTGGCTGAGACTAAAGAAGGAGACAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588239.5
ENST00000588897.5
3UTR-3UTR GCA 90 bp GCCTGGGACAGGTGGTCTACCTGCTTCTTCTCCCACTTCAGATACCCTCTGCCACGAAAGCCAAGACAGTaGCGCTACCATAAGTGCTGC +
Preference number: 2 (lower is better)
Translates to: AWDRWSTCFFSHFRYPLPRKPRQ*RYHKCC
Trigger: GCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCG...TGGCAGAGGGTATCTGAAGTGGGAGAAGAAGCAGGTAGACCACCTGTCCCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR-3UTR GCA 90 bp GAGAAGCCTGCTCCCTACTGTAACACTCCCAGGCCAATCTATACCCGCCCACACGCCAGCCTAAACGCGTaGAATTTAGCCCCTCACCAA +
Preference number: 2 (lower is better)
Translates to: EKPAPYCNTPRPIYTRPHASLNA*NLAPHQ
Trigger: TTGGTGAGGGGCTAAATTGCACGCGTTTAGGCTGGC...GTGTGGGCGGGTATAGATTGGCCTGGGAGTGTTACAGTAGGGAGCAGGCTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR-3UTR GCA 90 bp GGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGTTTGCTCTGCATGAATaGCAGAGAGGGTGGCACCAC +
Preference number: 2 (lower is better)
Translates to: GFSVWETQCRRLEQQWCEFALHE*QRGWHH
Trigger: GTGGTGCCACCCTCTCTGGCATTCATGCAGAGCAAA...CTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR-3UTR CCA 90 bp ACAAACCACGGCGGATGCAGATTTCAGGATCATGCTGGGGCCTGGCCCATTTGGCTGGTTCTCCCTCTCTaGCTAAGGAAGGATGGCGTA +
Preference number: 2 (lower is better)
Translates to: TNHGGCRFQDHAGAWPIWLVLPL*LRKDGV
Trigger: TACGCCATCCTTCCTTAGCCAGAGAGGGAGAACCAG...CCAAATGGGCCAGGCCCCAGCATGATCCTGAAATCTGCATCCGCCGTGGTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR-3UTR CCA 90 bp GGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGGAACTTTGGAGGAGCTaGAGCACTGGTGTCTGTTCC +
Preference number: 2 (lower is better)
Translates to: GFSVWETQCRRLEQQWCEELWRS*STGVCS
Trigger: GGAACAGACACCAGTGCTCCAGCTCCTCCAAAGTTC...CTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR CAA 90 bp GGAAAGCTACAATTACAGGCTAGCGCTTGTTGGGAACTGCCTAAGTaGATTCCTGAGGCCACAGCCTGGGGAGCCGACACGAAATCACGC +
Preference number: 2 (lower is better)
Translates to: GKLQLQASACWELPK*IPEATAWGADTKSR
Trigger: GCGTGATTTCGTGTCGGCTCCCCAGGCTGTGGCCTCAGGAATCAACTTAGGCAGTTCCCAACAAGCGCTAGCCTGTAATTGTAGCTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR CAA 90 bp GTGCCCACCTACCCTGAAGCGATAAGCAACACTGGCCATTGGGCCTaGCCTCTATGGGGAATGGAAGGCCTGAAAACACCCACAAATCCA +
Preference number: 2 (lower is better)
Translates to: VPTYPEAISNTGHWA*PLWGMEGLKTPTNP
Trigger: TGGATTTGTGGGTGTTTTCAGGCCTTCCATTCCCCATAGAGGCAAGGCCCAATGGCCAGTGTTGCTTATCGCTTCAGGGTAGGTGGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR-3UTR TCA 90 bp GAAATTCTGAGTCATGATGCAGGGGCAGGTGCTGTCACAGGGGCGGTCTGGGTGTCTTTGACTGCAAACTaGAAGACCTGCTTGCACGTC +
Preference number: 2 (lower is better)
Translates to: EILSHDAGAGAVTGAVWVSLTAN*KTCLHV
Trigger: GACGTGCAAGCAGGTCTTTCAGTTTGCAGTCAAAGA...CACCCAGACCGCCCCTGTGACAGCACCTGCCCCTGCATCATGACTCAGAATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588897.5
3UTR-3UTR GCA 90 bp AGGTGCTTCTTAAGTCCACGCTGGATGCTGCAGTTTTTACAGGAAACCACCTTGTGCCGCTACCATAAGTaGTGCCGTGGGGCCTGGGAG +
Preference number: 2 (lower is better)
Translates to: RCFLSPRWMLQFLQETTLCRYHK*CRGAWE
Trigger: CTCCCAGGCCCCACGGCAGCACTTATGGTAGCGGCA...CAAGGTGGTTTCCTGTAAAAACTGCAGCATCCAGCGTGGACTTAAGAAGCACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588897.5
3UTR-3UTR GCA 90 bp GGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGTCTGAGGTGTCATTGTaGCCTTCCTCCTCCTCATCT +
Preference number: 2 (lower is better)
Translates to: GFSVWETQCRRLEQQWCESEVSL*PSSSSS
Trigger: AGATGAGGAGGAGGAAGGGCACAATGACACCTCAGA...CTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588897.5
3UTR-3UTR CCA 90 bp TTTATTGGCAATGAAGCCGCATGTATACCAGGCTCCCCTAGTCCCCACCACCTTCCTGGCCCATTTGGGTaGGAGGAGCTTTCTGTCAGG +
Preference number: 2 (lower is better)
Translates to: FIGNEAACIPGSPSPHHLPGPFG*EELSVR
Trigger: CCTGACAGAAAGCTCCTCCCACCCAAATGGGCCAGG...AAGGTGGTGGGGACTAGGGGAGCCTGGTATACATGCGGCTTCATTGCCAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR-3UTR CCA 90 bp AGTGTGTGGAAGGAGTGCAGAGATTGCTCCCGCTGCACAGACTTGGCATTGGGGGAGGGGGAAGTGCATTaGGGTCTGACATCTCTGTTA +
Preference number: 2 (lower is better)
Translates to: SVWKECRDCSRCTDLALGEGEVH*GLTSLL
Trigger: TAACAGAGATGTCAGACCCCAATGCACTTCCCCCTC...CCCCAATGCCAAGTCTGTGCAGCGGGAGCAATCTCTGCACTCCTTCCACACACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
3UTR-3UTR CCA 90 bp TGCCAGATAGCAAGGACATTGCTTGGTATTGCACTGGGTCTTACAGCGACAGCCCCTGCTTGCACGTCTTaGTCCCCAGAAGCCTGGCTA +
Preference number: 2 (lower is better)
Translates to: CQIARTLLGIALGLTATAPACTS*SPEAWL
Trigger: TAGCCAGGCTTCTGGGGACCAAGACGTGCAAGCAGG...GGCTGTCGCTGTAAGACCCAGTGCAATACCAAGCAATGTCCTTGCTATCTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588897.5
3UTR-3UTR TCA 90 bp TGGGTCAGGAGGAACCCCACTTCTTCCTTCATGGGACAACAAGTGGAGTGGGAATGTGCTCGCTTCTTCTaGGGCCAGAGAAACAGTCTC +
Preference number: 2 (lower is better)
Translates to: WVRRNPTSSFMGQQVEWECARFF*GQRNSL
Trigger: GAGACTGTTTCTCTGGCCTCAGAAGAAGCGAGCACA...TTCCCACTCCACTTGTTGTCCCATGAAGGAAGAAGTGGGGTTCCTCCTGACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR-3UTR TCA 90 bp CCTACTGTAACACTCCCAGGCCAATCTATACCCGCCCACACCCTTTCTACTCAAGGGAACTGCCTAAGTTaGTTCCTGAGGCCACAGCCT +
Preference number: 2 (lower is better)
Translates to: PTVTLPGQSIPAHTLSTQGNCLS*FLRPQP
Trigger: AGGCTGTGGCCTCAGGAATCAACTTAGGCAGTTCCC...TTGAGTAGAAAGGGTGTGGGCGGGTATAGATTGGCCTGGGAGTGTTACAGTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR-3UTR GCA 90 bp ATTACACCAATCTTTCTCCTCTCTAGTCCAAGCCTGTGCCCACCTACCCTGAAGGTGTGGGAGACACAGTaGAGGAGACTCGAGCAGCAG +
Preference number: 2 (lower is better)
Translates to: ITPIFLLSSPSLCPPTLKVWETQ*RRLEQQ
Trigger: CTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACAC...CTTCAGGGTAGGTGGGCACAGGCTTGGACTAGAGAGGAGAAAGATTGGTGTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR-3UTR GCA 90 bp CAGTTTTTACAGGAAACCACCTTGCAGTCCCAGTGCTCTGAGGCCCCACAGGTGACTGAAAGACCTGCTTaGACGTCTTGGTCCCCAGAA +
Preference number: 2 (lower is better)
Translates to: QFLQETTLQSQCSEAPQVTERPA*TSWSPE
Trigger: TTCTGGGGACCAAGACGTGCAAGCAGGTCTTTCAGT...CACCTGTGGGGCCTCAGAGCACTGGGACTGCAAGGTGGTTTCCTGTAAAAACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000588897.5
3UTR-3UTR CCA 90 bp CCCGCTGCACAGACTTGGCATTGGGGCCATCGATGTTGGGTGTGCACTGAGGGGTCTCTTTCTTGTTACTaGCAGATCTTCTTTGCTGTC +
Preference number: 2 (lower is better)
Translates to: PAAQTWHWGHRCWVCTEGSLSCY*QIFFAV
Trigger: GACAGCAAAGAAGATCTGCCAGTAACAAGAAAGAGA...CCCCTCAGTGCACACCCAACATCGATGGCCCCAATGCCAAGTCTGTGCAGCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
3UTR-3UTR CCA 90 bp ACCTGCTTGCACGTCTTGGTCCCCAGAAGCCTGGCTATTGAACAGAAGTTGTTGGAAGCACTGACTATGTaGTGCCTTCTCCGGCGACGA +
Preference number: 2 (lower is better)
Translates to: TCLHVLVPRSLAIEQKLLEALTM*CLLRRR
Trigger: TCGTCGCCGGAGAAGGCACCACATAGTCAGTGCTTC...CAACAACTTCTGTTCAATAGCCAGGCTTCTGGGGACCAAGACGTGCAAGCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588239.5
ENST00000588897.5
3UTR-3UTR GCA 90 bp TTTATTGGCAATGAAGCCGCATGTATACCAGGCTCCCCTAGTCCCCACCACCTTTTTGCTCTGCATGAATaGCAGAGAGGGTGGCACCAC +
Preference number: 2 (lower is better)
Translates to: FIGNEAACIPGSPSPHHLFALHE*QRGWHH
Trigger: GTGGTGCCACCCTCTCTGGCATTCATGCAGAGCAAA...AAGGTGGTGGGGACTAGGGGAGCCTGGTATACATGCGGCTTCATTGCCAATAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR-3UTR GCA 90 bp TTTATTGGCAATGAAGCCGCATGTATACCAGGCTCCCCTAGTCCCCACCACCTTCAGATTTCAGGATCATaGTGGGGCCTGGCCCATTTG +
Preference number: 2 (lower is better)
Translates to: FIGNEAACIPGSPSPHHLQISGS*WGLAHL
Trigger: CAAATGGGCCAGGCCCCAGCATGATCCTGAAATCTG...AAGGTGGTGGGGACTAGGGGAGCCTGGTATACATGCGGCTTCATTGCCAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR-3UTR GCA 90 bp TGTGGAAGGAGTGCAGAGATTGCTCCCGCTGCACAGACTTGGCATTGGGGCCATCTGGCAGATCTTCTTTaGTGTCATCCTGCTTTCCAT +
Preference number: 2 (lower is better)
Translates to: CGRSAEIAPAAQTWHWGHLADLL*CHPAFH
Trigger: ATGGAAAGCAGGATGACAGCAAAGAAGATCTGCCAG...ATGGCCCCAATGCCAAGTCTGTGCAGCGGGAGCAATCTCTGCACTCCTTCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
3UTR-3UTR CCA 90 bp TTTATTGGCAATGAAGCCGCATGTATACCAGGCTCCCCTAGTCCCCACCACCTTAGACTCGAGCAGCAGTaGTGTGAGCACGAAAGCCAA +
Preference number: 2 (lower is better)
Translates to: FIGNEAACIPGSPSPHHLRLEQQ*CEHESQ
Trigger: TTGGCTTTCGTGCTCACACCACTGCTGCTCGAGTCT...AAGGTGGTGGGGACTAGGGGAGCCTGGTATACATGCGGCTTCATTGCCAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR-3UTR CCA 90 bp CTTTGGAGGAGCTGGAGCACTGGTGTCTGTTCCCAGGAATCTGAAAACACTTCTGGGGGTTTCTCAGTGTaGGAGACACAGTGCAGGAGA +
Preference number: 2 (lower is better)
Translates to: LWRSWSTGVCSQESENTSGGFSV*ETQCRR
Trigger: TCTCCTGCACTGTGTCTCCCACACTGAGAAACCCCC...AGAAGTGTTTTCAGATTCCTGGGAACAGACACCAGTGCTCCAGCTCCTCCAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR-3UTR CCA 90 bp CCTGGGACAGGTGGTCTACCTGCTTCTTCTCCCACTTCAGATACCCTCTGCCAGTTAACTACTATCATCTaGCTGGTTCTCCCTCTCTGG +
Preference number: 2 (lower is better)
Translates to: PGTGGLPASSPTSDTLCQLTTII*LVLPLW
Trigger: CCAGAGAGGGAGAACCAGCCAGATGATAGTAGTTAA...CTGGCAGAGGGTATCTGAAGTGGGAGAAGAAGCAGGTAGACCACCTGTCCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR-3UTR TCA 90 bp TGCCAGATAGCAAGGACATTGCTTGGTATTGCACTGGGTCTTACAGCGACAGCCATCCTGCTTTCCATCTaGGGTGTCATTGTGCCCTTC +
Preference number: 2 (lower is better)
Translates to: CQIARTLLGIALGLTATAILLSI*GVIVPF
Trigger: GAAGGGCACAATGACACCTCAGATGGAAAGCAGGAT...GGCTGTCGCTGTAAGACCCAGTGCAATACCAAGCAATGTCCTTGCTATCTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588897.5
3UTR-3UTR TCA 90 bp AGTGCAGAGATTGCTCCCGCTGCACAGACTTGGCATTGGGGCCATCGATGTTGGATTCTCAGGGAACATTaGGGCAATTGCACTGAAGAT +
Preference number: 2 (lower is better)
Translates to: SAEIAPAAQTWHWGHRCWILREH*GNCTED
Trigger: ATCTTCAGTGCAATTGCCTCAATGTTCCCTGAGAAT...CCAACATCGATGGCCCCAATGCCAAGTCTGTGCAGCGGGAGCAATCTCTGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
3UTR-3UTR GCA 90 bp CATCGATGTTGGGTGTGCACTGAGGGGGAAGTGCATTGGGGTCTGACATCTCTGTCTTTGCTGTCATCCTaGTTTCCATCTGAGGTGTCA +
Preference number: 2 (lower is better)
Translates to: HRCWVCTEGEVHWGLTSLSLLSS*FPSEVS
Trigger: TGACACCTCAGATGGAAAGCAGGATGACAGCAAAGA...CAGAGATGTCAGACCCCAATGCACTTCCCCCTCAGTGCACACCCAACATCGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
3UTR-3UTR CCA 90 bp TTGAGACCCATCTTTAAAAGTGGGGGACAGCAGGGACAAAGGATGGGAAACTGGTGGGCCTTGCCTCTATaGGGAATGGAAGGCCTGAAA +
Preference number: 2 (lower is better)
Translates to: LRPIFKSGGQQGQRMGNWWALPL*GMEGLK
Trigger: TTTCAGGCCTTCCATTCCCCATAGAGGCAAGGCCCA...CCAGTTTCCCATCCTTTGTCCCTGCTGTCCCCCACTTTTAAAGATGGGTCTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR-3UTR GCA 90 bp GGCAGCTGGGTCAGGAGGAACCCCACTTCTTCCTTCATGGGACAACAAGTGGAGAAGAAATGGTTAAAGTaGTTTGCTCTGCATGAATGC +
Preference number: 2 (lower is better)
Translates to: GSWVRRNPTSSFMGQQVEKKWLK*FALHEC
Trigger: GCATTCATGCAGAGCAAAGCACTTTAACCATTTCTT...CTCCACTTGTTGTCCCATGAAGGAAGAAGTGGGGTTCCTCCTGACCCAGCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR-3UTR CCA 90 bp TTTCCAAACAGCAGGCACTACAGACAGGAAAGCAGATTACACCAATCTTTCTCCAGCAACACTGGCCATTaGGCCTTGCCTCTATGGGGA +
Preference number: 2 (lower is better)
Translates to: FPNSRHYRQESRLHQSFSSNTGH*ALPLWG
Trigger: TCCCCATAGAGGCAAGGCCCAATGGCCAGTGTTGCT...GGAGAAAGATTGGTGTAATCTGCTTTCCTGTCTGTAGTGCCTGCTGTTTGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR-3UTR CCA 90 bp CATCGATGTTGGGTGTGCACTGAGGGGGAAGTGCATTGGGGTCTGACATCTCTGGAAGATCATGTCATTTaGGAACTGTTTCTTGGAACT +
Preference number: 2 (lower is better)
Translates to: HRCWVCTEGEVHWGLTSLEDHVI*ELFLGT
Trigger: AGTTCCAAGAAACAGTTCCCAAATGACATGATCTTC...CAGAGATGTCAGACCCCAATGCACTTCCCCCTCAGTGCACACCCAACATCGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
3UTR-3UTR TCA 90 bp GGAACTCTTTTTGTTGCCTTCAATAGCATGTCGCTTTCTCTTTCTTGTTACTGGTCCTCATCTGAGTACTaGTTCAGGGCATCGACCAAC +
Preference number: 2 (lower is better)
Translates to: GTLFVAFNSMSLSLSCYWSSSEY*FRASTN
Trigger: GTTGGTCGATGCCCTGAATCAGTACTCAGATGAGGA...CCAGTAACAAGAAAGAGAAAGCGACATGCTATTGAAGGCAACAAAAAGAGTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
3UTR-3UTR CCA 90 bp GGGTTGGTAGTTGTACACTTGTGTGGAAGAGTTATCTTTCTTCAGCTGAATCTTCTCCTTCATGTCATCTaGGACACCATTCTCAGGGAA +
Preference number: 2 (lower is better)
Translates to: GLVVVHLCGRVIFLQLNLLLHVI*DTILRE
Trigger: TTCCCTGAGAATGGTGTCCCAGATGACATGAAGGAG...AAGATTCAGCTGAAGAAAGATAACTCTTCCACACAAGTGTACAACTACCAACCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588897.5
3UTR-3UTR GCA 90 bp AGGGTTGGTAGTTGTACACTTGTGTGGAAGAGTTATCTTTCTTCAGCTGAATCTCTGGCAGATCTTCTTTaGTGTCATCCTGCTTTCCAT +
Preference number: 2 (lower is better)
Translates to: RVGSCTLVWKSYLSSAESLADLL*CHPAFH
Trigger: ATGGAAAGCAGGATGACAGCAAAGAAGATCTGCCAG...AGATTCAGCTGAAGAAAGATAACTCTTCCACACAAGTGTACAACTACCAACCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588897.5
3UTR GCA 72 bp GGCCCATTTGGGTGGGAGGAGCTTTCTGTCAGGAGTTaGTGGGTGCGGGGTACGTGTGTGCCCTCCAGTGTG +
Preference number: 3 (lower is better)
Translates to: GPFGWEELSVRS*WVRGTCVPSSV
Trigger: CACACTGGAGGGCACACACGTACCCCGCACCCAGCAACTCCTGACAGAAAGCTCCTCCCACCCAAATGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR GCA 72 bp GCTGAGGCATTGGAGCAGGAAGCACTGACTATGTGGTaGCTTCTCCGGCGACGACCAGAGCACTTGGAGCGG +
Preference number: 3 (lower is better)
Translates to: AEALEQEALTMW*LLRRRPEHLER
Trigger: CCGCTCCAAGTGCTCTGGTCGTCGCCGGAGAAGGCACCACATAGTCAGTGCTTCCTGCTCCAATGCCTCAGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588239.5
ENST00000588897.5
3UTR CCA 72 bp CCATTTGGGTGGGAGGAGCTTTCTGTCAGGAGTTGCTaGGTGCGGGGTACGTGTGTGCCCTCCAGTGTGGTG +
Preference number: 3 (lower is better)
Translates to: PFGWEELSVRSC*VRGTCVPSSVV
Trigger: CACCACACTGGAGGGCACACACGTACCCCGCACCCAGCAACTCCTGACAGAAAGCTCCTCCCACCCAAATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR-3UTR CAA 90 bp GGTGGGAGGAGCTTTCTGTCAGGAGTTGCTGGGTGCGGGGTACGTGTGTGCCCTACTGGCCATTGGGCCTaGCCTCTATGGGGAATGGAA +
Preference number: 3 (lower is better)
Translates to: GGRSFLSGVAGCGVRVCPTGHWA*PLWGME
Trigger: TTCCATTCCCCATAGAGGCAAGGCCCAATGGCCAGT...AGGGCACACACGTACCCCGCACCCAGCAACTCCTGACAGAAAGCTCCTCCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR GCA 72 bp TCAGATACCCTCTGCCAGTGTGCCCTGCACACGGGGTaGCAGCCTAAACGCGTGCAATTTAGCCCCTCACCA +
Preference number: 3 (lower is better)
Translates to: SDTLCQCALHTG*QPKRVQFSPSP
Trigger: TGGTGAGGGGCTAAATTGCACGCGTTTAGGCTGGCACCCCGTGTGCAGGGCACACTGGCAGAGGGTATCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR GCA 72 bp GAGGGTGGCACCACAGCCTGGGACAGGTGGTCTACCTaGTTCTTCTCCCACTTCAGATACCCTCTGCCAGTG +
Preference number: 3 (lower is better)
Translates to: EGGTTAWDRWST*FFSHFRYPLPV
Trigger: CACTGGCAGAGGGTATCTGAAGTGGGAGAAGAAGCAGGTAGACCACCTGTCCCAGGCTGTGGTGCCACCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR CCA 72 bp GTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTaGTGTGAGCACGAAAGCCAAGACAGTGCCGCTACC +
Preference number: 3 (lower is better)
Translates to: VWETQCRRLEQQ*CEHESQDSAAT
Trigger: GGTAGCGGCACTGTCTTGGCTTTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
3UTR CCA 72 bp GGACATGGCAGAGGCCTCACTACAGAGGGAGTGGGTTaGGGGGTTTCTCAGTGTGGGAGACACAGTGCAGGA +
Preference number: 3 (lower is better)
Translates to: GHGRGLTTEGVG*GVSQCGRHSAG
Trigger: TCCTGCACTGTGTCTCCCACACTGAGAAACCCCCCAACCCACTCCCTCTGTAGTGAGGCCTCTGCCATGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000588897.5
ENST00000592743.5
3UTR CCA 72 bp GATTTCAGGATCATGCTGGGGCCTGGCCCATTTGGGTaGGAGGAGCTTTCTGTCAGGAGTTGCTGGGTGCGG +
Preference number: 3 (lower is better)
Translates to: DFRIMLGPGPFG*EELSVRSCWVR
Trigger: CCGCACCCAGCAACTCCTGACAGAAAGCTCCTCCCACCCAAATGGGCCAGGCCCCAGCATGATCCTGAAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR CCA 72 bp CACGGCGGATGCAGATTTCAGGATCATGCTGGGGCCTaGCCCATTTGGGTGGGAGGAGCTTTCTGTCAGGAG +
Preference number: 3 (lower is better)
Translates to: HGGCRFQDHAGA*PIWVGGAFCQE
Trigger: CTCCTGACAGAAAGCTCCTCCCACCCAAATGGGCCAGGCCCCAGCATGATCCTGAAATCTGCATCCGCCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR CCA 72 bp CTCCGGCGACGACCAGAGCACTTGGAGCGGGGGTTGTaGAGCATGGCATACTCCTTTGCTCCTTCCAGCAAA +
Preference number: 3 (lower is better)
Translates to: LRRRPEHLERGL*SMAYSFAPSSK
Trigger: TTTGCTGGAAGGAGCAAAGGAGTATGCCATGCTCCACAACCCCCGCTCCAAGTGCTCTGGTCGTCGCCGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588239.5
ENST00000588897.5
3UTR CCA 72 bp CTATGTGGTGCCTTCTCCGGCGACGACCAGAGCACTTaGAGCGGGGGTTGTGGAGCATGGCATACTCCTTTG +
Preference number: 3 (lower is better)
Translates to: LCGAFSGDDQST*SGGCGAWHTPL
Trigger: CAAAGGAGTATGCCATGCTCCACAACCCCCGCTCCAAGTGCTCTGGTCGTCGCCGGAGAAGGCACCACATAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588239.5
ENST00000588897.5
3UTR CCA 72 bp CATGATGCAGGGGCAGGTGCTGTCACAGGGGCGGTCTaGGTGGTCGCAGGGTTGGTAGTTGTACACTTGTGT +
Preference number: 3 (lower is better)
Translates to: HDAGAGAVTGAV*VVAGLVVVHLC
Trigger: ACACAAGTGTACAACTACCAACCCTGCGACCACCCAGACCGCCCCTGTGACAGCACCTGCCCCTGCATCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588897.5
3UTR-3UTR CAA 90 bp TGCCAGAGAGGGTGGCACCACAGCCTGGGACAGGTGGTCTACCTGCTTCTTCTCCTGTCTCCCCTCTCATaGAGACAGTTTTGTGCCCTC +
Preference number: 3 (lower is better)
Translates to: CQRGWHHSLGQVVYLLLLLSPLS*RQFCAL
Trigger: GAGGGCACAAAACTGTCTCAATGAGAGGGGAGACAG...GAGAAGAAGCAGGTAGACCACCTGTCCCAGGCTGTGGTGCCACCCTCTCTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR TCA 72 bp TCCACAGGCTCCGAGGGTGCTTCCACTACGCAGAGTTaGGGTGGGGCTGGACTAGCCTTCTGTTTTGTGGGA +
Preference number: 3 (lower is better)
Translates to: STGSEGASTTQS*GGAGLAFCFVG
Trigger: TCCCACAAAACAGAAGGCTAGTCCAGCCCCACCTCAACTCTGCGTAGTGGAAGCACCCTCGGAGCCTGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586935.5
ENST00000588239.5
ENST00000588897.5
3UTR CCA 72 bp GCAGCTGGGTCAGGAGGAACCCCACTTCTTCCTTCATaGGACAACAAGTGGAGTGGGAAGAAGCGGGGCTCT +
Preference number: 3 (lower is better)
Translates to: AAGSGGTPLLPS*DNKWSGKKRGS
Trigger: AGAGCCCCGCTTCTTCCCACTCCACTTGTTGTCCCATGAAGGAAGAAGTGGGGTTCCTCCTGACCCAGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR CCA 72 bp AGTGCAGAGATTGCTCCCGCTGCACAGACTTGGCATTaGGGCCATCGATGTTGGGTGTGCACTGAGGGGGAA +
Preference number: 3 (lower is better)
Translates to: SAEIAPAAQTWH*GHRCWVCTEGE
Trigger: TTCCCCCTCAGTGCACACCCAACATCGATGGCCCCAATGCCAAGTCTGTGCAGCGGGAGCAATCTCTGCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
3UTR CCA 72 bp GGAAGGAGTGCAGAGATTGCTCCCGCTGCACAGACTTaGCATTGGGGCCATCGATGTTGGGTGTGCACTGAG +
Preference number: 3 (lower is better)
Translates to: GRSAEIAPAAQT*HWGHRCWVCTE
Trigger: CTCAGTGCACACCCAACATCGATGGCCCCAATGCCAAGTCTGTGCAGCGGGAGCAATCTCTGCACTCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
3UTR CCA 72 bp CGAGGGTGCTTCCACTACGCAGAGTTGAGGTGGGGCTaGACTAGCCTTCTGTTTTGTGGGAGTCTGACAGCG +
Preference number: 3 (lower is better)
Translates to: RGCFHYAELRWG*TSLLFCGSLTA
Trigger: CGCTGTCAGACTCCCACAAAACAGAAGGCTAGTCCAGCCCCACCTCAACTCTGCGTAGTGGAAGCACCCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586935.5
ENST00000588239.5
ENST00000588897.5
3UTR CCA 72 bp AGGCTCCGAGGGTGCTTCCACTACGCAGAGTTGAGGTaGGGCTGGACTAGCCTTCTGTTTTGTGGGAGTCTG +
Preference number: 3 (lower is better)
Translates to: RLRGCFHYAELR*GWTSLLFCGSL
Trigger: CAGACTCCCACAAAACAGAAGGCTAGTCCAGCCCCACCTCAACTCTGCGTAGTGGAAGCACCCTCGGAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586935.5
ENST00000588239.5
ENST00000588897.5
3UTR-3UTR CAA 90 bp CCTGGGACAGGTGGTCTACCTGCTTCTTCTCCCACTTCAGATACCCTCTGCCAGTGGGAACTGCCTAAGTaGATTCCTGAGGCCACAGCC +
Preference number: 3 (lower is better)
Translates to: PGTGGLPASSPTSDTLCQWELPK*IPEATA
Trigger: GGCTGTGGCCTCAGGAATCAACTTAGGCAGTTCCCA...CTGGCAGAGGGTATCTGAAGTGGGAGAAGAAGCAGGTAGACCACCTGTCCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR TCA 72 bp GGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTaGGCACGAAAGCCAAGACAGTGCCGCTACCATAAG +
Preference number: 3 (lower is better)
Translates to: GDTVQETRAAVV*ARKPRQCRYHK
Trigger: CTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
3UTR TCA 72 bp TTCTCCTCTCTAGTCCAAGCCTGTGCCCACCTACCCTaGAGCGATAAGCAACACTGGCCATTGGGCCTTGCC +
Preference number: 3 (lower is better)
Translates to: FSSLVQACAHLP*SDKQHWPLGLA
Trigger: GGCAAGGCCCAATGGCCAGTGTTGCTTATCGCTTCAGGGTAGGTGGGCACAGGCTTGGACTAGAGAGGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR TCA 72 bp GGTGGGGCTGGACTAGCCTTCTGTTTTGTGGGAGTCTaGCAGCGAGAGTTAGCCTCTGAAGAACTGGAGGCC +
Preference number: 3 (lower is better)
Translates to: GGAGLAFCFVGV*QRELASEELEA
Trigger: GGCCTCCAGTTCTTCAGAGGCTAACTCTCGCTGTCAGACTCCCACAAAACAGAAGGCTAGTCCAGCCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586935.5
ENST00000588239.5
ENST00000588897.5
3UTR GCA 72 bp CTTCTCCCACTTCAGATACCCTCTGCCAGTGTGCCCTaGACACGGGGTGCCAGCCTAAACGCGTGCAATTTA +
Preference number: 3 (lower is better)
Translates to: LLPLQIPSASVP*TRGASLNACNL
Trigger: TAAATTGCACGCGTTTAGGCTGGCACCCCGTGTGCAGGGCACACTGGCAGAGGGTATCTGAAGTGGGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR GCA 72 bp CTGCAGTTTTTACAGGAAACCACCTTGCAGTCCCAGTaGTCTGAGGCCCCACAGGTGAGACACAGGTCAGGG +
Preference number: 3 (lower is better)
Translates to: LQFLQETTLQSQ*SEAPQVRHRSG
Trigger: CCCTGACCTGTGTCTCACCTGTGGGGCCTCAGAGCACTGGGACTGCAAGGTGGTTTCCTGTAAAAACTGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588897.5
3UTR CCA 72 bp AATGCCAGAGAGGGTGGCACCACAGCCTGGGACAGGTaGTCTACCTGCTTCTTCTCCCACTTCAGATACCCT +
Preference number: 3 (lower is better)
Translates to: NAREGGTTAWDR*STCFFSHFRYP
Trigger: AGGGTATCTGAAGTGGGAGAAGAAGCAGGTAGACCACCTGTCCCAGGCTGTGGTGCCACCCTCTCTGGCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR-3UTR CAA 90 bp TGGGTCAGGAGGAACCCCACTTCTTCCTTCATGGGACAACAAGTGGAGTGGGAATCAACATACTGCTCCTaGTTCCCAGCCAGCCCGGCA +
Preference number: 3 (lower is better)
Translates to: WVRRNPTSSFMGQQVEWESTYCS*FPASPA
Trigger: TGCCGGGCTGGCTGGGAACAAGGAGCAGTATGTTGA...TTCCCACTCCACTTGTTGTCCCATGAAGGAAGAAGTGGGGTTCCTCCTGACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR TCA 72 bp AATTACAGGCTAGCGCTTGTTGGGAACTGCCTAAGTTaGTTCCTGAGGCCACAGCCTGGGGAGCCGACACGA +
Preference number: 3 (lower is better)
Translates to: NYRLALVGNCLS*FLRPQPGEPTR
Trigger: TCGTGTCGGCTCCCCAGGCTGTGGCCTCAGGAATCAACTTAGGCAGTTCCCAACAAGCGCTAGCCTGTAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR GCA 72 bp AGTGTGCCCTGCACACGGGGTGCCAGCCTAAACGCGTaGAATTTAGCCCCTCACCAACCTTGGAACATATTC +
Preference number: 3 (lower is better)
Translates to: SVPCTRGASLNA*NLAPHQPWNIF
Trigger: GAATATGTTCCAAGGTTGGTGAGGGGCTAAATTGCACGCGTTTAGGCTGGCACCCCGTGTGCAGGGCACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR GCA 72 bp GAATACAAACCACGGCGGATGCAGATTTCAGGATCATaGTGGGGCCTGGCCCATTTGGGTGGGAGGAGCTTT +
Preference number: 3 (lower is better)
Translates to: EYKPRRMQISGS*WGLAHLGGRSF
Trigger: AAAGCTCCTCCCACCCAAATGGGCCAGGCCCCAGCATGATCCTGAAATCTGCATCCGCCGTGGTTTGTATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR CCA 72 bp CCCACCTACCCTGAAGCGATAAGCAACACTGGCCATTaGGCCTTGCCTCTATGGGGAATGGAAGGCCTGAAA +
Preference number: 3 (lower is better)
Translates to: PTYPEAISNTGH*ALPLWGMEGLK
Trigger: TTTCAGGCCTTCCATTCCCCATAGAGGCAAGGCCCAATGGCCAGTGTTGCTTATCGCTTCAGGGTAGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR CCA 72 bp GAGGGGGCCAGCAGCAGGTGCTTCTTAAGTCCACGCTaGATGCTGCAGTTTTTACAGGAAACCACCTTGCAG +
Preference number: 3 (lower is better)
Translates to: EGASSRCFLSPR*MLQFLQETTLQ
Trigger: CTGCAAGGTGGTTTCCTGTAAAAACTGCAGCATCCAGCGTGGACTTAAGAAGCACCTGCTGCTGGCCCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000588897.5
3UTR-3UTR CAA 90 bp CCTACTGTAACACTCCCAGGCCAATCTATACCCGCCCACACCCTTTCTACTCAACCACACTCTTTCAGTTaGAGCCCTGCCACGAGGGAG +
Preference number: 3 (lower is better)
Translates to: PTVTLPGQSIPAHTLSTQPHSFS*SPATRE
Trigger: CTCCCTCGTGGCAGGGCTCAAACTGAAAGAGTGTGG...TTGAGTAGAAAGGGTGTGGGCGGGTATAGATTGGCCTGGGAGTGTTACAGTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR-3UTR CAA 90 bp TGGAAGGAGTGCAGAGATTGCTCCCGCTGCACAGACTTGGCATTGGGGCCATCGACTGGCAGATCTTCTTaGCTGTCATCCTGCTTTCCA +
Preference number: 3 (lower is better)
Translates to: WKECRDCSRCTDLALGPSTGRSS*LSSCFP
Trigger: TGGAAAGCAGGATGACAGCAAAGAAGATCTGCCAGT...CGATGGCCCCAATGCCAAGTCTGTGCAGCGGGAGCAATCTCTGCACTCCTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
3UTR GCA 72 bp AGGCCTGAAAACACCCACAAATCCAGCGAGCCAGGATaGTCACACCTGCCAGGCATACCCCTAATGCTTCTT +
Preference number: 3 (lower is better)
Translates to: RPENTHKSSEPG*SHLPGIPLMLL
Trigger: AAGAAGCATTAGGGGTATGCCTGGCAGGTGTGAGCATCCTGGCTCGCTGGATTTGTGGGTGTTTTCAGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR GCA 72 bp AAAAGTGTGTGGAAGGAGTGCAGAGATTGCTCCCGCTaGACAGACTTGGCATTGGGGCCATCGATGTTGGGT +
Preference number: 3 (lower is better)
Translates to: KSVWKECRDCSR*TDLALGPSMLG
Trigger: ACCCAACATCGATGGCCCCAATGCCAAGTCTGTGCAGCGGGAGCAATCTCTGCACTCCTTCCACACACTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
3UTR CCA 72 bp TGGGAACTGCCTAAGTTGATTCCTGAGGCCACAGCCTaGGGAGCCGACACGAAATCACGCATAAGTCATCCA +
Preference number: 3 (lower is better)
Translates to: WELPKLIPEATA*GADTKSRISHP
Trigger: TGGATGACTTATGCGTGATTTCGTGTCGGCTCCCCAGGCTGTGGCCTCAGGAATCAACTTAGGCAGTTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR GCA 72 bp CTCGCACTGCCAGATAGCAAGGACATTGCTTGGTATTaGACTGGGTCTTACAGCGACAGCCAGGGAAACGAT +
Preference number: 3 (lower is better)
Translates to: LALPDSKDIAWY*TGSYSDSQGND
Trigger: ATCGTTTCCCTGGCTGTCGCTGTAAGACCCAGTGCAATACCAAGCAATGTCCTTGCTATCTGGCAGTGCGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588897.5
3UTR CCA 72 bp TTGCCTGCAGCTGCTAAGCCAGAACTTTGGAGGAGCTaGAGCACTGGTGTCTGTTCCCAGGAATCTGAAAAC +
Preference number: 3 (lower is better)
Translates to: LPAAAKPELWRS*STGVCSQESEN
Trigger: GTTTTCAGATTCCTGGGAACAGACACCAGTGCTCCAGCTCCTCCAAAGTTCTGGCTTAGCAGCTGCAGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR CCA 72 bp GCGATAAGCAACACTGGCCATTGGGCCTTGCCTCTATaGGGAATGGAAGGCCTGAAAACACCCACAAATCCA +
Preference number: 3 (lower is better)
Translates to: AISNTGHWALPL*GMEGLKTPTNP
Trigger: TGGATTTGTGGGTGTTTTCAGGCCTTCCATTCCCCATAGAGGCAAGGCCCAATGGCCAGTGTTGCTTATCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR CCA 72 bp CACATTCTCGCACTGCCAGATAGCAAGGACATTGCTTaGTATTGCACTGGGTCTTACAGCGACAGCCAGGGA +
Preference number: 3 (lower is better)
Translates to: HILALPDSKDIA*YCTGSYSDSQG
Trigger: TCCCTGGCTGTCGCTGTAAGACCCAGTGCAATACCAAGCAATGTCCTTGCTATCTGGCAGTGCGAGAATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588897.5
3UTR-3UTR CAA 90 bp CTCCCTACTGTAACACTCCCAGGCCAATCTATACCCGCCCACACCCTTTCTACTCTCATTGAGACAGTTTaGTGCCCTCTGGACATGGCA +
Preference number: 3 (lower is better)
Translates to: LPTVTLPGQSIPAHTLSTLIETV*CPLDMA
Trigger: TGCCATGTCCAGAGGGCACAAAACTGTCTCAATGAG...AGTAGAAAGGGTGTGGGCGGGTATAGATTGGCCTGGGAGTGTTACAGTAGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR-3UTR CAA 90 bp TGCTTCTTAAGTCCACGCTGGATGCTGCAGTTTTTACAGGAAACCACCTTGCAGCCATCTGAGGTGTCATaGTGCCCTTCCTCCTCCTCA +
Preference number: 3 (lower is better)
Translates to: CFLSPRWMLQFLQETTLQPSEVS*CPSSSS
Trigger: TGAGGAGGAGGAAGGGCACAATGACACCTCAGATGG...CTGCAAGGTGGTTTCCTGTAAAAACTGCAGCATCCAGCGTGGACTTAAGAAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588897.5
3UTR-3UTR CAA 90 bp AGTGTGTGGAAGGAGTGCAGAGATTGCTCCCGCTGCACAGACTTGGCATTGGGGTTGGAACTCTTTTTGTaGCCTTCAATAGCATGTCGC +
Preference number: 3 (lower is better)
Translates to: SVWKECRDCSRCTDLALGLELFL*PSIACR
Trigger: GCGACATGCTATTGAAGGCAACAAAAAGAGTTCCAA...CCCCAATGCCAAGTCTGTGCAGCGGGAGCAATCTCTGCACTCCTTCCACACACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
3UTR GCA 72 bp CTGTACTTAGAACCCACACTCTTTCAGTTTGAGCCCTaGCACGAGGGAGGAGGTAGTAAGGTGACCTGTCTA +
Preference number: 3 (lower is better)
Translates to: LYLEPTLFQFEP*HEGGGSKVTCL
Trigger: TAGACAGGTCACCTTACTACCTCCTCCCTCGTGGCAGGGCTCAAACTGAAAGAGTGTGGGTTCTAAGTACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR GCA 72 bp TCCCTGATATGCACAATGAATACAAACCACGGCGGATaGAGATTTCAGGATCATGCTGGGGCCTGGCCCATT +
Preference number: 3 (lower is better)
Translates to: SLICTMNTNHGG*RFQDHAGAWPI
Trigger: AATGGGCCAGGCCCCAGCATGATCCTGAAATCTGCATCCGCCGTGGTTTGTATTCATTGTGCATATCAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR CCA 72 bp CATCGATGTTGGGTGTGCACTGAGGGGGAAGTGCATTaGGGTCTGACATCTCTGTTAGTTCTCGATACCTCT +
Preference number: 3 (lower is better)
Translates to: HRCWVCTEGEVH*GLTSLLVLDTS
Trigger: AGAGGTATCGAGAACTAACAGAGATGTCAGACCCCAATGCACTTCCCCCTCAGTGCACACCCAACATCGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
3UTR TCA 72 bp GAGGAGCTGGAGCACTGGTGTCTGTTCCCAGGAATCTaGAAACACTTCTCCATCTATCTCCAGAGTACACAG +
Preference number: 3 (lower is better)
Translates to: EELEHWCLFPGI*KHFSIYLQSTQ
Trigger: CTGTGTACTCTGGAGATAGATGGAGAAGTGTTTTCAGATTCCTGGGAACAGACACCAGTGCTCCAGCTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR GCA 72 bp GAAGGATGGCGTAGCTTTCCTTCCCCCAGCCTTGAATaGCTGTACTTAGAACCCACACTCTTTCAGTTTGAG +
Preference number: 3 (lower is better)
Translates to: EGWRSFPSPSLE*LYLEPTLFQFE
Trigger: CTCAAACTGAAAGAGTGTGGGTTCTAAGTACAGGCATTCAAGGCTGGGGGAAGGAAAGCTACGCCATCCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR CCA 72 bp AGTTTAACTACTATCATCTGGCTGGTTCTCCCTCTCTaGCTAAGGAAGGATGGCGTAGCTTTCCTTCCCCCA +
Preference number: 3 (lower is better)
Translates to: SLTTIIWLVLPL*LRKDGVAFLPP
Trigger: TGGGGGAAGGAAAGCTACGCCATCCTTCCTTAGCCAGAGAGGGAGAACCAGCCAGATGATAGTAGTTAAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR GCA 72 bp TGGAACCCACAGTCCAGCTTGAGGGTATCCCTGATATaGACAATGAATACAAACCACGGCGGATGCAGATTT +
Preference number: 3 (lower is better)
Translates to: WNPQSSLRVSLI*TMNTNHGGCRF
Trigger: AAATCTGCATCCGCCGTGGTTTGTATTCATTGTGCATATCAGGGATACCCTCAAGCTGGACTGTGGGTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR-3UTR CAA 90 bp GCAGGGTTGGTAGTTGTACACTTGTGTGGAAGAGTTATCTTTCTTCAGCTGAATTGCACAGACTTGGCATaGGGGCCATCGATGTTGGGT +
Preference number: 3 (lower is better)
Translates to: AGLVVVHLCGRVIFLQLNCTDLA*GPSMLG
Trigger: ACCCAACATCGATGGCCCCAATGCCAAGTCTGTGCA...ATTCAGCTGAAGAAAGATAACTCTTCCACACAAGTGTACAACTACCAACCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588897.5
3UTR-3UTR CAA 90 bp GATCATGTCATTTGGGAACTGTTTCTTGGAACTCTTTTTGTTGCCTTCAATAGCCCATCTGAGGTGTCATaGTGCCCTTCCTCCTCCTCA +
Preference number: 3 (lower is better)
Translates to: DHVIWELFLGTLFVAFNSPSEVS*CPSSSS
Trigger: TGAGGAGGAGGAAGGGCACAATGACACCTCAGATGG...GCTATTGAAGGCAACAAAAAGAGTTCCAAGAAACAGTTCCCAAATGACATGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
3UTR TCA 72 bp TGGTCCCCAGAAGCCTGGCTATTGAACAGAAGTTGTTaGAGTAGGTGCCATGGAAGACTCGAAAAAGAGATT +
Preference number: 3 (lower is better)
Translates to: WSPEAWLLNRSC*SRCHGRLEKEI
Trigger: AATCTCTTTTTCGAGTCTTCCATGGCACCTACTTCAACAACTTCTGTTCAATAGCCAGGCTTCTGGGGACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588239.5
ENST00000588897.5
3UTR-3UTR CAA 90 bp GCAGGGTTGGTAGTTGTACACTTGTGTGGAAGAGTTATCTTTCTTCAGCTGAATACTGGCAGATCTTCTTaGCTGTCATCCTGCTTTCCA +
Preference number: 3 (lower is better)
Translates to: AGLVVVHLCGRVIFLQLNTGRSS*LSSCFP
Trigger: TGGAAAGCAGGATGACAGCAAAGAAGATCTGCCAGT...ATTCAGCTGAAGAAAGATAACTCTTCCACACAAGTGTACAACTACCAACCCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588897.5
3UTR TCA 72 bp GGACACCATTCTCAGGGAACATTGAGGCAATTGCACTaGAGATCATGTCATTTGGGAACTGTTTCTTGGAAC +
Preference number: 3 (lower is better)
Translates to: GHHSQGTLRQLH*RSCHLGTVSWN
Trigger: GTTCCAAGAAACAGTTCCCAAATGACATGATCTTCAGTGCAATTGCCTCAATGTTCCCTGAGAATGGTGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
3UTR TCA 72 bp CTTCATGTCATCTGGGACACCATTCTCAGGGAACATTaGGGCAATTGCACTGAAGATCATGTCATTTGGGAA +
Preference number: 3 (lower is better)
Translates to: LHVIWDTILREH*GNCTEDHVIWE
Trigger: TTCCCAAATGACATGATCTTCAGTGCAATTGCCTCAATGTTCCCTGAGAATGGTGTCCCAGATGACATGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
3UTR TCA 72 bp GTTCATGAGCTCATCTGTTGGCAGCTTCAGGATAAGTaGTTCTTTGACTGCAAACTGAAAGACCTGCTTGCA +
Preference number: 3 (lower is better)
Translates to: VHELICWQLQDK*FFDCKLKDLLA
Trigger: TGCAAGCAGGTCTTTCAGTTTGCAGTCAAAGAATCACTTATCCTGAAGCTGCCAACAGATGAGCTCATGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588239.5
ENST00000588897.5
CDS-3UTR TCA 90 bp CTTCAGATACCCTCTGCCAGTGTGCCCTGCACACGGGGTGCCAGCCTAAACGCGGCAGTCCCAGTGCTCTaGGGCCCCACAGGTGAGACA +
Preference number: 4 (lower is better)
Translates to: LQIPSASVPCTRGASLNAAVPVL*GPTGET
Trigger: TGTCTCACCTGTGGGGCCTCAGAGCACTGGGACTGC...CGCGTTTAGGCTGGCACCCCGTGTGCAGGGCACACTGGCAGAGGGTATCTGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR TCA 90 bp GAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGGCAGTCCCAGTGCTCTaGGGCCCCACAGGTGAGACA +
Preference number: 4 (lower is better)
Translates to: EHESQDSAATISAAVGPGAVPVL*GPTGET
Trigger: TGTCTCACCTGTGGGGCCTCAGAGCACTGGGACTGC...CCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp TTCTGTCAGGAGTTGCTGGGTGCGGGGTACGTGTGTGCCCTCCAGTGTGGTGAGCGCTACCATAAGTGCTaGCGTGGGGCCTGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: FCQELLGAGYVCALQCGERYHKC*RGAWEG
Trigger: GCCCTCCCAGGCCCCACGGCAGCACTTATGGTAGCG...CTCACCACACTGGAGGGCACACACGTACCCCGCACCCAGCAACTCCTGACAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp CACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGAGGTCTGCCAGTGTGCCCTaGACACGGGGTGCCAGCCTA +
Preference number: 4 (lower is better)
Translates to: HESQDSAATISAAVGPGRSASVP*TRGASL
Trigger: TAGGCTGGCACCCCGTGTGCAGGGCACACTGGCAGA...CCTCCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp GTGCCTTCTCCGGCGACGACCAGAGCACTTGGAGCGGGGGTTGTGGAGCATGGCCCTGCTTGCACGTCTTaGTCCCCAGAAGCCTGGCTA +
Preference number: 4 (lower is better)
Translates to: VPSPATTRALGAGVVEHGPACTS*SPEAWL
Trigger: TAGCCAGGCTTCTGGGGACCAAGACGTGCAAGCAGG...GCCATGCTCCACAACCCCCGCTCCAAGTGCTCTGGTCGTCGCCGGAGAAGGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588239.5
ENST00000588897.5
CDS-3UTR CCA 90 bp CCATTCCACAGGCTCCGAGGGTGCTTCCACTACGCAGAGTTGAGGTGGGGCTGGGTCACAGGGGCGGTCTaGGTGGTCGCAGGGTTGGTA +
Preference number: 4 (lower is better)
Translates to: PFHRLRGCFHYAELRWGWVTGAV*VVAGLV
Trigger: TACCAACCCTGCGACCACCCAGACCGCCCCTGTGAC...CCAGCCCCACCTCAACTCTGCGTAGTGGAAGCACCCTCGGAGCCTGTGGAATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588239.5
ENST00000588897.5
CDS-3UTR CCA 90 bp CCCGCTGCACAGACTTGGCATTGGGGCCATCGATGTTGGGTGTGCACTGAGGGGGTCACAGGGGCGGTCTaGGTGGTCGCAGGGTTGGTA +
Preference number: 4 (lower is better)
Translates to: PAAQTWHWGHRCWVCTEGVTGAV*VVAGLV
Trigger: TACCAACCCTGCGACCACCCAGACCGCCCCTGTGAC...CCCCTCAGTGCACACCCAACATCGATGGCCCCAATGCCAAGTCTGTGCAGCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000588897.5
CDS-3UTR CCA 90 bp CACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGAGGGTCACAGGGGCGGTCTaGGTGGTCGCAGGGTTGGTA +
Preference number: 4 (lower is better)
Translates to: HESQDSAATISAAVGPGRVTGAV*VVAGLV
Trigger: TACCAACCCTGCGACCACCCAGACCGCCCCTGTGAC...CCTCCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp TGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTCGCTACCATAAGTGCTaGCGTGGGGCCTGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: CEHESQDSAATISAAVGPRYHKC*RGAWEG
Trigger: GCCCTCCCAGGCCCCACGGCAGCACTTATGGTAGCG...AGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp CTTCTCCGGCGACGACCAGAGCACTTGGAGCGGGGGTTGTGGAGCATGGCATACGACGACCAGAGCACTTaGAGCGGGGGTTGTGGAGCA +
Preference number: 4 (lower is better)
Translates to: LLRRRPEHLERGLWSMAYDDQST*SGGCGA
Trigger: TGCTCCACAACCCCCGCTCCAAGTGCTCTGGTCGTC...GTATGCCATGCTCCACAACCCCCGCTCCAAGTGCTCTGGTCGTCGCCGGAGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000588239.5
ENST00000588897.5
CDS-3UTR TCA 90 bp CACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGAGGGCGAGAGTTAGCCTCTaGAGAACTGGAGGCCCAGTC +
Preference number: 4 (lower is better)
Translates to: HESQDSAATISAAVGPGRARVSL*RTGGPV
Trigger: GACTGGGCCTCCAGTTCTTCAGAGGCTAACTCTCGC...CCTCCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp TGCCAGAGAGGGTGGCACCACAGCCTGGGACAGGTGGTCTACCTGCTTCTTCTCTCCACTACGCAGAGTTaGGGTGGGGCTGGACTAGCC +
Preference number: 4 (lower is better)
Translates to: CQRGWHHSLGQVVYLLLLSTTQS*GGAGLA
Trigger: GGCTAGTCCAGCCCCACCTCAACTCTGCGTAGTGGA...GAGAAGAAGCAGGTAGACCACCTGTCCCAGGCTGTGGTGCCACCCTCTCTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR TCA 90 bp TTCCACAGGCTCCGAGGGTGCTTCCACTACGCAGAGTTGAGGTGGGGCTGGACTTCCACTACGCAGAGTTaGGGTGGGGCTGGACTAGCC +
Preference number: 4 (lower is better)
Translates to: FHRLRGCFHYAELRWGWTSTTQS*GGAGLA
Trigger: GGCTAGTCCAGCCCCACCTCAACTCTGCGTAGTGGA...AGTCCAGCCCCACCTCAACTCTGCGTAGTGGAAGCACCCTCGGAGCCTGTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586935.5
ENST00000588239.5
ENST00000588897.5
CDS-3UTR TCA 90 bp GGGGGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGCAGTCCCAGTGCTCTaGGGCCCCACAGGTGAGACA +
Preference number: 4 (lower is better)
Translates to: GGFSVWETQCRRLEQQWCAVPVL*GPTGET
Trigger: TGTCTCACCTGTGGGGCCTCAGAGCACTGGGACTGC...ACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp GGGGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGGCAGTCCCAGTGCTCTaGGGCCCCACAGGTGAGACA +
Preference number: 4 (lower is better)
Translates to: GVSQCGRHSAGDSSSSGVAVPVL*GPTGET
Trigger: TGTCTCACCTGTGGGGCCTCAGAGCACTGGGACTGC...CACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp CACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGAGGGCACAGACTCCTTTATaGAGGTGCCCCATCCGGCCA +
Preference number: 4 (lower is better)
Translates to: HESQDSAATISAAVGPGRAQTPL*RCPIRP
Trigger: TGGCCGGATGGGGCACCTTCATAAAGGAGTCTGTGC...CCTCCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp GAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGCGAGCAGCAGTGGTGTaGGCACGAAAGCCAAGACAG +
Preference number: 4 (lower is better)
Translates to: EHESQDSAATISAAVGPGRAAVV*ARKPRQ
Trigger: CTGTCTTGGCTTTCGTGCTCACACCACTGCTGCTCG...CCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp CACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGAGGCACACTCTTTCAGTTTaGGCCCTGCCACGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: HESQDSAATISAAVGPGRHTLSV*ALPRGR
Trigger: CCTCCCTCGTGGCAGGGCTCAAACTGAAAGAGTGTG...CCTCCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp CAGCCCCAGTCCATTCCACAGGCTCCGAGGGTGCTTCCACTACGCAGAGTTGAGACCTTGCAGTCCCAGTaGTCTGAGGCCCCACAGGTG +
Preference number: 4 (lower is better)
Translates to: QPQSIPQAPRVLPLRRVETLQSQ*SEAPQV
Trigger: CACCTGTGGGGCCTCAGAGCACTGGGACTGCAAGGT...CTCAACTCTGCGTAGTGGAAGCACCCTCGGAGCCTGTGGAATGGACTGGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588897.5
CDS-3UTR GCA 90 bp GTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCCGCTACCATAAGTGCTaGCGTGGGGCCTGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: VSQCGRHSAGDSSSSGVSRYHKC*RGAWEG
Trigger: GCCCTCCCAGGCCCCACGGCAGCACTTATGGTAGCG...GCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp TTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACCGCTACCATAAGTGCTaGCGTGGGGCCTGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: FSVWETQCRRLEQQWCEHRYHKC*RGAWEG
Trigger: GCCCTCCCAGGCCCCACGGCAGCACTTATGGTAGCG...GTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp GGGGGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTTGCCGCTACCATAAGTaGTGCCGTGGGGCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: GGFSVWETQCRRLEQQWCCRYHK*CRGAWE
Trigger: CTCCCAGGCCCCACGGCAGCACTTATGGTAGCGGCA...ACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp AGCACTGACTATGTGGTGCCTTCTCCGGCGACGACCAGAGCACTTGGAGCGGGGGTGTGGGAGACACAGTaGAGGAGACTCGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: STDYVVPSPATTRALGAGVWETQ*RRLEQQ
Trigger: CTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACAC...CCCCGCTCCAAGTGCTCTGGTCGTCGCCGGAGAAGGCACCACATAGTCAGTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588897.5
CDS-3UTR GCA 90 bp GAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGGTGTGGGAGACACAGTaGAGGAGACTCGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: EHESQDSAATISAAVGPGVWETQ*RRLEQQ
Trigger: CTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACAC...CCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp GAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGTGGGGCCATCGATGTTaGGTGTGCACTGAGGGGGAA +
Preference number: 4 (lower is better)
Translates to: EHESQDSAATISAAVGPGWGHRC*VCTEGE
Trigger: TTCCCCCTCAGTGCACACCCAACATCGATGGCCCCA...CCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp GAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGCCCGCTGCACAGACTTaGCATTGGGGCCATCGATGT +
Preference number: 4 (lower is better)
Translates to: EHESQDSAATISAAVGPGPAAQT*HWGHRC
Trigger: ACATCGATGGCCCCAATGCCAAGTCTGTGCAGCGGG...CCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp GAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGCCTGCTTGCACGTCTTaGTCCCCAGAAGCCTGGCTA +
Preference number: 4 (lower is better)
Translates to: EHESQDSAATISAAVGPGPACTS*SPEAWL
Trigger: TAGCCAGGCTTCTGGGGACCAAGACGTGCAAGCAGG...CCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
3UTR CAA 72 bp TGGCCCATTTGGGTGGGAGGAGCTTTCTGTCAGGAGTaGCTGGGTGCGGGGTACGTGTGTGCCCTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: WPIWVGGAFCQE*LGAGYVCALQC
Trigger: ACACTGGAGGGCACACACGTACCCCGCACCCAGCAACTCCTGACAGAAAGCTCCTCCCACCCAAATGGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR CAA 72 bp CTTCTCCGGCGACGACCAGAGCACTTGGAGCGGGGGTaGTGGAGCATGGCATACTCCTTTGCTCCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: LLRRRPEHLERG*WSMAYSFAPSS
Trigger: GCTGGAAGGAGCAAAGGAGTATGCCATGCTCCACAACCCCCGCTCCAAGTGCTCTGGTCGTCGCCGGAGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588239.5
ENST00000588897.5
CDS-3UTR TCA 90 bp CTCCGAGGGTGCTTCCACTACGCAGAGTTGAGGTGGGGCTGGACTAGCCTTCTGGCGAGAGTTAGCCTCTaGAGAACTGGAGGCCCAGTC +
Preference number: 4 (lower is better)
Translates to: LRGCFHYAELRWGWTSLLARVSL*RTGGPV
Trigger: GACTGGGCCTCCAGTTCTTCAGAGGCTAACTCTCGC...CAGAAGGCTAGTCCAGCCCCACCTCAACTCTGCGTAGTGGAAGCACCCTCGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586935.5
ENST00000588239.5
ENST00000588897.5
CDS-3UTR TCA 90 bp AGGCTCCGAGGGTGCTTCCACTACGCAGAGTTGAGGTGGGGCTGGACTAGCCTTGCGAGAGTTAGCCTCTaGAGAACTGGAGGCCCAGTC +
Preference number: 4 (lower is better)
Translates to: RLRGCFHYAELRWGWTSLARVSL*RTGGPV
Trigger: GACTGGGCCTCCAGTTCTTCAGAGGCTAACTCTCGC...AAGGCTAGTCCAGCCCCACCTCAACTCTGCGTAGTGGAAGCACCCTCGGAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586935.5
ENST00000588239.5
ENST00000588897.5
CDS-3UTR TCA 90 bp TGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTTCCACTACGCAGAGTTaGGGTGGGGCTGGACTAGCC +
Preference number: 4 (lower is better)
Translates to: CEHESQDSAATISAAVGPSTTQS*GGAGLA
Trigger: GGCTAGTCCAGCCCCACCTCAACTCTGCGTAGTGGA...AGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp GAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGCCAGGGAAACGATTCTaGCAGTCTGGGTTGCACTGG +
Preference number: 4 (lower is better)
Translates to: EHESQDSAATISAAVGPGPGKRF*QSGLHW
Trigger: CCAGTGCAACCCAGACTGTCAGAATCGTTTCCCTGG...CCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp GTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCGCAGTCCCAGTGCTCTaGGGCCCCACAGGTGAGACA +
Preference number: 4 (lower is better)
Translates to: VSQCGRHSAGDSSSSGVSAVPVL*GPTGET
Trigger: TGTCTCACCTGTGGGGCCTCAGAGCACTGGGACTGC...GCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp TGCCAGAGAGGGTGGCACCACAGCCTGGGACAGGTGGTCTACCTGCTTCTTCTCGAAGAAGCGGGGCTCTaGGTCCCAGAAAGAAGGGAG +
Preference number: 4 (lower is better)
Translates to: CQRGWHHSLGQVVYLLLLEEAGL*VPERRE
Trigger: CTCCCTTCTTTCTGGGACTCAGAGCCCCGCTTCTTC...GAGAAGAAGCAGGTAGACCACCTGTCCCAGGCTGTGGTGCCACCCTCTCTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp CACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGAGGAGTGTGTGGAAGGAGTaGAGAGATTGCTCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: HESQDSAATISAAVGPGRSVWKE*RDCSRC
Trigger: GCAGCGGGAGCAATCTCTGCACTCCTTCCACACACT...CCTCCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp TTCTGTCAGGAGTTGCTGGGTGCGGGGTACGTGTGTGCCCTCCAGTGTGGTGAGGCACTGACTATGTGGTaGCTTCTCCGGCGACGACCA +
Preference number: 4 (lower is better)
Translates to: FCQELLGAGYVCALQCGEALTMW*LLRRRP
Trigger: TGGTCGTCGCCGGAGAAGGCACCACATAGTCAGTGC...CTCACCACACTGGAGGGCACACACGTACCCCGCACCCAGCAACTCCTGACAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp GGGGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGACCTTGCAGTCCCAGTaGTCTGAGGCCCCACAGGTG +
Preference number: 4 (lower is better)
Translates to: GVSQCGRHSAGDSSSSGVTLQSQ*SEAPQV
Trigger: CACCTGTGGGGCCTCAGAGCACTGGGACTGCAAGGT...CACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp CAGTGGTGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGTGCCGCTACCATAAGTaGTGCCGTGGGGCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: QWCEHESQDSAATISAAVCRYHK*CRGAWE
Trigger: CTCCCAGGCCCCACGGCAGCACTTATGGTAGCGGCA...CACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACACCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp TCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAGCCCTGCACACGGGGTaGCAGCCTAAACGCGTGCAA +
Preference number: 4 (lower is better)
Translates to: SVWETQCRRLEQQWCEHEALHTG*QPKRVQ
Trigger: TTGCACGCGTTTAGGCTGGCACCCCGTGTGCAGGGC...TTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp TGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAAGCCAAGCCCTGCACACGGGGTaGCAGCCTAAACGCGTGCAA +
Preference number: 4 (lower is better)
Translates to: WETQCRRLEQQWCEHESQALHTG*QPKRVQ
Trigger: TTGCACGCGTTTAGGCTGGCACCCCGTGTGCAGGGC...TTGGCTTTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp TGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAAGCCAATACCCTCTGCCAGTGTaGCCTGCACACGGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: WETQCRRLEQQWCEHESQYPLPV*PAHGVP
Trigger: TGGCACCCCGTGTGCAGGGCACACTGGCAGAGGGTA...TTGGCTTTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp GGGGGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGACGACCAGAGCACTTaGAGCGGGGGTTGTGGAGCA +
Preference number: 4 (lower is better)
Translates to: GGFSVWETQCRRLEQQWCDDQST*SGGCGA
Trigger: TGCTCCACAACCCCCGCTCCAAGTGCTCTGGTCGTC...ACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp GGGGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGGACGACCAGAGCACTTaGAGCGGGGGTTGTGGAGCA +
Preference number: 4 (lower is better)
Translates to: GVSQCGRHSAGDSSSSGVDDQST*SGGCGA
Trigger: TGCTCCACAACCCCCGCTCCAAGTGCTCTGGTCGTC...CACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp GAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGTACGCAGAGTTGAGGTaGGGCTGGACTAGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: EHESQDSAATISAAVGPGYAELR*GWTSLL
Trigger: CAGAAGGCTAGTCCAGCCCCACCTCAACTCTGCGTA...CCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp GAGAAGCCTGCTCCCTACTGTAACACTCCCAGGCCAATCTATACCCGCCCACACGTCACAGGGGCGGTCTaGGTGGTCGCAGGGTTGGTA +
Preference number: 4 (lower is better)
Translates to: EKPAPYCNTPRPIYTRPHVTGAV*VVAGLV
Trigger: TACCAACCCTGCGACCACCCAGACCGCCCCTGTGAC...GTGTGGGCGGGTATAGATTGGCCTGGGAGTGTTACAGTAGGGAGCAGGCTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp CAGTGGTGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGTCACAGGGGCGGTCTaGGTGGTCGCAGGGTTGGTA +
Preference number: 4 (lower is better)
Translates to: QWCEHESQDSAATISAAVVTGAV*VVAGLV
Trigger: TACCAACCCTGCGACCACCCAGACCGCCCCTGTGAC...CACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACACCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp TCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAGTCACAGGGGCGGTCTaGGTGGTCGCAGGGTTGGTA +
Preference number: 4 (lower is better)
Translates to: SVWETQCRRLEQQWCEHEVTGAV*VVAGLV
Trigger: TACCAACCCTGCGACCACCCAGACCGCCCCTGTGAC...TTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp TTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGTCACAGGGGCGGTCTaGGTGGTCGCAGGGTTGGTA +
Preference number: 4 (lower is better)
Translates to: FSVWETQCRRLEQQWCEHVTGAV*VVAGLV
Trigger: TACCAACCCTGCGACCACCCAGACCGCCCCTGTGAC...GTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp CACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGAGGGGGGGTTTCTCAGTGTaGGAGACACAGTGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: HESQDSAATISAAVGPGRGGFSV*ETQCRR
Trigger: TCTCCTGCACTGTGTCTCCCACACTGAGAAACCCCC...CCTCCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTG
60% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp GGTGGGAGGAGCTTTCTGTCAGGAGTTGCTGGGTGCGGGGTACGTGTGTGCCCTACAGCCTGGGACAGGTaGTCTACCTGCTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GGRSFLSGVAGCGVRVCPTAWDR*STCFFS
Trigger: GGAGAAGAAGCAGGTAGACCACCTGTCCCAGGCTGT...AGGGCACACACGTACCCCGCACCCAGCAACTCCTGACAGAAAGCTCCTCCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR CAA 72 bp ACCCGCCCACACCCTTTCTACTCAACATACTGCTCCTaGTTCCCAGCCAGCCCGGCACACCCACCATGGACA +
Preference number: 4 (lower is better)
Translates to: TRPHPFYSTYCS*FPASPAHPPWT
Trigger: TGTCCATGGTGGGTGTGCCGGGCTGGCTGGGAACAAGGAGCAGTATGTTGAGTAGAAAGGGTGTGGGCGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR TCA 90 bp TTCCACAGGCTCCGAGGGTGCTTCCACTACGCAGAGTTGAGGTGGGGCTGGACTTGGAGCAGGAAGCACTaGCTATGTGGTGCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: FHRLRGCFHYAELRWGWTWSRKH*LCGAFS
Trigger: GGAGAAGGCACCACATAGTCAGTGCTTCCTGCTCCA...AGTCCAGCCCCACCTCAACTCTGCGTAGTGGAAGCACCCTCGGAGCCTGTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586935.5
ENST00000588239.5
ENST00000588897.5
CDS-3UTR TCA 90 bp GGGGGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGCGAGAGTTAGCCTCTaGAGAACTGGAGGCCCAGTC +
Preference number: 4 (lower is better)
Translates to: GGFSVWETQCRRLEQQWCARVSL*RTGGPV
Trigger: GACTGGGCCTCCAGTTCTTCAGAGGCTAACTCTCGC...ACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp CAGTGGTGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGTCCACTACGCAGAGTTaGGGTGGGGCTGGACTAGCC +
Preference number: 4 (lower is better)
Translates to: QWCEHESQDSAATISAAVSTTQS*GGAGLA
Trigger: GGCTAGTCCAGCCCCACCTCAACTCTGCGTAGTGGA...CACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACACCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp GTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCTCCACTACGCAGAGTTaGGGTGGGGCTGGACTAGCC +
Preference number: 4 (lower is better)
Translates to: VSQCGRHSAGDSSSSGVSSTTQS*GGAGLA
Trigger: GGCTAGTCCAGCCCCACCTCAACTCTGCGTAGTGGA...GCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp CACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGAGGTCTGTGAGGGGTTCATaGGCTCATCTGTTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: HESQDSAATISAAVGPGRSVRGS*AHLLAA
Trigger: AGCTGCCAACAGATGAGCTCATGAACCCCTCACAGA...CCTCCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp CAGTCCATTCCACAGGCTCCGAGGGTGCTTCCACTACGCAGAGTTGAGGTGGGGCCAGGGAAACGATTCTaGCAGTCTGGGTTGCACTGG +
Preference number: 4 (lower is better)
Translates to: QSIPQAPRVLPLRRVEVGPGKRF*QSGLHW
Trigger: CCAGTGCAACCCAGACTGTCAGAATCGTTTCCCTGG...CCCCACCTCAACTCTGCGTAGTGGAAGCACCCTCGGAGCCTGTGGAATGGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588897.5
CDS-3UTR TCA 90 bp TGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGCACAGACTCCTTTATaGAGGTGCCCCATCCGGCCA +
Preference number: 4 (lower is better)
Translates to: CEHESQDSAATISAAVGPAQTPL*RCPIRP
Trigger: TGGCCGGATGGGGCACCTTCATAAAGGAGTCTGTGC...AGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp TTCTGTCAGGAGTTGCTGGGTGCGGGGTACGTGTGTGCCCTCCAGTGTGGTGAGTGCCCTCCAGTGTGGTaGGTGAGAGCATGTGAGTGT +
Preference number: 4 (lower is better)
Translates to: FCQELLGAGYVCALQCGECPPVW*VRACEC
Trigger: ACACTCACATGCTCTCACTCACCACACTGGAGGGCA...CTCACCACACTGGAGGGCACACACGTACCCCGCACCCAGCAACTCCTGACAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp CACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGAGGCATCGATGTTGGGTGTaGACTGAGGGGGAAGTGCAT +
Preference number: 4 (lower is better)
Translates to: HESQDSAATISAAVGPGRHRCWV*TEGEVH
Trigger: ATGCACTTCCCCCTCAGTGCACACCCAACATCGATG...CCTCCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp TGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGCACTGACTATGTGGTaGCTTCTCCGGCGACGACCA +
Preference number: 4 (lower is better)
Translates to: CEHESQDSAATISAAVGPALTMW*LLRRRP
Trigger: TGGTCGTCGCCGGAGAAGGCACCACATAGTCAGTGC...AGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp TTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACACCTTGCAGTCCCAGTaGTCTGAGGCCCCACAGGTG +
Preference number: 4 (lower is better)
Translates to: FSVWETQCRRLEQQWCEHTLQSQ*SEAPQV
Trigger: CACCTGTGGGGCCTCAGAGCACTGGGACTGCAAGGT...GTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp GTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACCTTGCAGTCCCAGTaGTCTGAGGCCCCACAGGTG +
Preference number: 4 (lower is better)
Translates to: VSQCGRHSAGDSSSSGVSTLQSQ*SEAPQV
Trigger: CACCTGTGGGGCCTCAGAGCACTGGGACTGCAAGGT...GCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp CAGTGGTGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGACCTTGCAGTCCCAGTaGTCTGAGGCCCCACAGGTG +
Preference number: 4 (lower is better)
Translates to: QWCEHESQDSAATISAAVTLQSQ*SEAPQV
Trigger: CACCTGTGGGGCCTCAGAGCACTGGGACTGCAAGGT...CACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACACCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp GCCTCTATGGGGAATGGAAGGCCTGAAAACACCCACAAATCCAGCGAGCCAGGATGCCGCTACCATAAGTaGTGCCGTGGGGCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: ASMGNGRPENTHKSSEPGCRYHK*CRGAWE
Trigger: CTCCCAGGCCCCACGGCAGCACTTATGGTAGCGGCA...TCCTGGCTCGCTGGATTTGTGGGTGTTTTCAGGCCTTCCATTCCCCATAGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp CACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGAGGCGAAAGCCAAGACAGTaGCGCTACCATAAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: HESQDSAATISAAVGPGRRKPRQ*RYHKCC
Trigger: GCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCG...CCTCCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp TGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGTGTGGGAGACACAGTaGAGGAGACTCGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: CEHESQDSAATISAAVGPVWETQ*RRLEQQ
Trigger: CTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACAC...AGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp GCCTCTATGGGGAATGGAAGGCCTGAAAACACCCACAAATCCAGCGAGCCAGGATCTGCCAGTGTGCCCTaGACACGGGGTGCCAGCCTA +
Preference number: 4 (lower is better)
Translates to: ASMGNGRPENTHKSSEPGSASVP*TRGASL
Trigger: TAGGCTGGCACCCCGTGTGCAGGGCACACTGGCAGA...TCCTGGCTCGCTGGATTTGTGGGTGTTTTCAGGCCTTCCATTCCCCATAGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp GCCTCTATGGGGAATGGAAGGCCTGAAAACACCCACAAATCCAGCGAGCCAGGATACCCTCTGCCAGTGTaGCCTGCACACGGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: ASMGNGRPENTHKSSEPGYPLPV*PAHGVP
Trigger: TGGCACCCCGTGTGCAGGGCACACTGGCAGAGGGTA...TCCTGGCTCGCTGGATTTGTGGGTGTTTTCAGGCCTTCCATTCCCCATAGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp GCCTGGGACAGGTGGTCTACCTGCTTCTTCTCCCACTTCAGATACCCTCTGCCATCAGGAGTTGCTGGGTaGGGGGTACGTGTGTGCCCT +
Preference number: 4 (lower is better)
Translates to: AWDRWSTCFFSHFRYPLPSGVAG*GVRVCP
Trigger: AGGGCACACACGTACCCCGCACCCAGCAACTCCTGA...TGGCAGAGGGTATCTGAAGTGGGAGAAGAAGCAGGTAGACCACCTGTCCCAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp TGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTTGGGGCCATCGATGTTaGGTGTGCACTGAGGGGGAA +
Preference number: 4 (lower is better)
Translates to: CEHESQDSAATISAAVGPWGHRC*VCTEGE
Trigger: TTCCCCCTCAGTGCACACCCAACATCGATGGCCCCA...AGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp GGGGGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTTGGGGCCATCGATGTTaGGTGTGCACTGAGGGGGAA +
Preference number: 4 (lower is better)
Translates to: GGFSVWETQCRRLEQQWCWGHRC*VCTEGE
Trigger: TTCCCCCTCAGTGCACACCCAACATCGATGGCCCCA...ACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp GAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGGGGGGTTGTGGAGCATaGCATACTCCTTTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: EHESQDSAATISAAVGPGGGCGA*HTPLLL
Trigger: AAGGAGCAAAGGAGTATGCCATGCTCCACAACCCCC...CCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTC
59% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp TTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGACGACCAGAGCACTTaGAGCGGGGGTTGTGGAGCA +
Preference number: 4 (lower is better)
Translates to: FSVWETQCRRLEQQWCEHDDQST*SGGCGA
Trigger: TGCTCCACAACCCCCGCTCCAAGTGCTCTGGTCGTC...GTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp CGAGGGTGCTTCCACTACGCAGAGTTGAGGTGGGGCTGGACTAGCCTTCTGTTTGACGACCAGAGCACTTaGAGCGGGGGTTGTGGAGCA +
Preference number: 4 (lower is better)
Translates to: RGCFHYAELRWGWTSLLFDDQST*SGGCGA
Trigger: TGCTCCACAACCCCCGCTCCAAGTGCTCTGGTCGTC...AAACAGAAGGCTAGTCCAGCCCCACCTCAACTCTGCGTAGTGGAAGCACCCTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586935.5
ENST00000588239.5
ENST00000588897.5
CDS-3UTR CCA 90 bp CAGCGAGAGTTAGCCTCTGAAGAACTGGAGGCCCAGTCATTGCCTGTGTCCCTGGACGACCAGAGCACTTaGAGCGGGGGTTGTGGAGCA +
Preference number: 4 (lower is better)
Translates to: QRELASEELEAQSLPVSLDDQST*SGGCGA
Trigger: TGCTCCACAACCCCCGCTCCAAGTGCTCTGGTCGTC...CAGGGACACAGGCAATGACTGGGCCTCCAGTTCTTCAGAGGCTAACTCTCGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000586935.5
ENST00000588239.5
ENST00000588897.5
CDS-3UTR CCA 90 bp TGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAAGCCAAGACGACCAGAGCACTTaGAGCGGGGGTTGTGGAGCA +
Preference number: 4 (lower is better)
Translates to: WETQCRRLEQQWCEHESQDDQST*SGGCGA
Trigger: TGCTCCACAACCCCCGCTCCAAGTGCTCTGGTCGTC...TTGGCTTTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp TTCCACAGGCTCCGAGGGTGCTTCCACTACGCAGAGTTGAGGTGGGGCTGGACTGAAGCACTGACTATGTaGTGCCTTCTCCGGCGACGA +
Preference number: 4 (lower is better)
Translates to: FHRLRGCFHYAELRWGWTEALTM*CLLRRR
Trigger: TCGTCGCCGGAGAAGGCACCACATAGTCAGTGCTTC...AGTCCAGCCCCACCTCAACTCTGCGTAGTGGAAGCACCCTCGGAGCCTGTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586935.5
ENST00000588239.5
ENST00000588897.5
CDS-3UTR CCA 90 bp GGGGGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTCCTGCTTGCACGTCTTaGTCCCCAGAAGCCTGGCTA +
Preference number: 4 (lower is better)
Translates to: GGFSVWETQCRRLEQQWCPACTS*SPEAWL
Trigger: TAGCCAGGCTTCTGGGGACCAAGACGTGCAAGCAGG...ACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp GAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGAGACTCGAGCAGCAGTaGTGTGAGCACGAAAGCCAA +
Preference number: 4 (lower is better)
Translates to: EHESQDSAATISAAVGPGRLEQQ*CEHESQ
Trigger: TTGGCTTTCGTGCTCACACCACTGCTGCTCGAGTCT...CCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp CACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGAGGAGACTCGAGCAGCAGTaGTGTGAGCACGAAAGCCAA +
Preference number: 4 (lower is better)
Translates to: HESQDSAATISAAVGPGRRLEQQ*CEHESQ
Trigger: TTGGCTTTCGTGCTCACACCACTGCTGCTCGAGTCT...CCTCCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp CACAGACTTGGCATTGGGGCCATCGATGTTGGGTGTGCACTGAGGGGGAAGTGCACAGAGGGAGTGGGTTaGGGGGTTTCTCAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: HRLGIGAIDVGCALRGKCTEGVG*GVSQCG
Trigger: CCCACACTGAGAAACCCCCCAACCCACTCCCTCTGT...GCACTTCCCCCTCAGTGCACACCCAACATCGATGGCCCCAATGCCAAGTCTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000588897.5
CDS-3UTR CCA 90 bp TGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTACAGAGGGAGTGGGTTaGGGGGTTTCTCAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: CEHESQDSAATISAAVGPTEGVG*GVSQCG
Trigger: CCCACACTGAGAAACCCCCCAACCCACTCCCTCTGT...AGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp GGGGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGACAGAGGGAGTGGGTTaGGGGGTTTCTCAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: GVSQCGRHSAGDSSSSGVTEGVG*GVSQCG
Trigger: CCCACACTGAGAAACCCCCCAACCCACTCCCTCTGT...CACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp CCTGGGACAGGTGGTCTACCTGCTTCTTCTCCCACTTCAGATACCCTCTGCCAGCCCCTCCCTCAGGAGTaGGATTTAGGCAGGGACCCT +
Preference number: 4 (lower is better)
Translates to: PGTGGLPASSPTSDTLCQPLPQE*DLGRDP
Trigger: AGGGTCCCTGCCTAAATCCCACTCCTGAGGGAGGGG...CTGGCAGAGGGTATCTGAAGTGGGAGAAGAAGCAGGTAGACCACCTGTCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp GAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGGAGATGAGACAGGACTaGAGGAGAATCTCCCACCCT +
Preference number: 4 (lower is better)
Translates to: EHESQDSAATISAAVGPGEMRQD*RRISHP
Trigger: AGGGTGGGAGATTCTCCTCCAGTCCTGTCTCATCTC...CCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp TTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGGGGCCTGGCCCATTTaGGTGGGAGGAGCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: FSVWETQCRRLEQQWCEHGAWPI*VGGAFC
Trigger: ACAGAAAGCTCCTCCCACCCAAATGGGCCAGGCCCC...GTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp CAGTGGTGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGATCATGCTGGGGCCTaGCCCATTTGGGTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: QWCEHESQDSAATISAAVDHAGA*PIWVGG
Trigger: TCCTCCCACCCAAATGGGCCAGGCCCCAGCATGATC...CACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACACCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp TGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAAGCCAAGATCATGCTGGGGCCTaGCCCATTTGGGTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: WETQCRRLEQQWCEHESQDHAGA*PIWVGG
Trigger: TCCTCCCACCCAAATGGGCCAGGCCCCAGCATGATC...TTGGCTTTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp TGCCAGAGAGGGTGGCACCACAGCCTGGGACAGGTGGTCTACCTGCTTCTTCTCTCCATCATGACGTGGTaGGGAGGGGTTGAGACCCAT +
Preference number: 4 (lower is better)
Translates to: CQRGWHHSLGQVVYLLLLSIMTW*GGVETH
Trigger: ATGGGTCTCAACCCCTCCCCACCACGTCATGATGGA...GAGAAGAAGCAGGTAGACCACCTGTCCCAGGCTGTGGTGCCACCCTCTCTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR TCA 90 bp GAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGTCCTCATCTGAGTACTaGTTCAGGGCATCGACCAAC +
Preference number: 4 (lower is better)
Translates to: EHESQDSAATISAAVGPGSSSEY*FRASTN
Trigger: GTTGGTCGATGCCCTGAATCAGTACTCAGATGAGGA...CCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp CCCGCTGCACAGACTTGGCATTGGGGCCATCGATGTTGGGTGTGCACTGAGGGGATCCTGCTTTCCATCTaGGGTGTCATTGTGCCCTTC +
Preference number: 4 (lower is better)
Translates to: PAAQTWHWGHRCWVCTEGILLSI*GVIVPF
Trigger: GAAGGGCACAATGACACCTCAGATGGAAAGCAGGAT...CCCCTCAGTGCACACCCAACATCGATGGCCCCAATGCCAAGTCTGTGCAGCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
CDS-3UTR TCA 90 bp CCATTCCACAGGCTCCGAGGGTGCTTCCACTACGCAGAGTTGAGGTGGGGCTGGATCCTGCTTTCCATCTaGGGTGTCATTGTGCCCTTC +
Preference number: 4 (lower is better)
Translates to: PFHRLRGCFHYAELRWGWILLSI*GVIVPF
Trigger: GAAGGGCACAATGACACCTCAGATGGAAAGCAGGAT...CCAGCCCCACCTCAACTCTGCGTAGTGGAAGCACCCTCGGAGCCTGTGGAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586935.5
ENST00000588897.5
CDS-3UTR TCA 90 bp GGCATTGGAGCAGGAAGCACTGACTATGTGGTGCCTTCTCCGGCGACGACCAGATGGAGCAGGAAGCACTaGCTATGTGGTGCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GIGAGSTDYVVPSPATTRWSRKH*LCGAFS
Trigger: GGAGAAGGCACCACATAGTCAGTGCTTCCTGCTCCA...TCTGGTCGTCGCCGGAGAAGGCACCACATAGTCAGTGCTTCCTGCTCCAATGCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588239.5
ENST00000588897.5
CDS-3UTR TCA 90 bp TGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTTGGAGCAGGAAGCACTaGCTATGTGGTGCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: CEHESQDSAATISAAVGPWSRKH*LCGAFS
Trigger: GGAGAAGGCACCACATAGTCAGTGCTTCCTGCTCCA...AGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp GGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGGCGAGAGTTAGCCTCTaGAGAACTGGAGGCCCAGTC +
Preference number: 4 (lower is better)
Translates to: GFSVWETQCRRLEQQWCEARVSL*RTGGPV
Trigger: GACTGGGCCTCCAGTTCTTCAGAGGCTAACTCTCGC...CTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp TGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAAGCCAAGCGAGAGTTAGCCTCTaGAGAACTGGAGGCCCAGTC +
Preference number: 4 (lower is better)
Translates to: WETQCRRLEQQWCEHESQARVSL*RTGGPV
Trigger: GACTGGGCCTCCAGTTCTTCAGAGGCTAACTCTCGC...TTGGCTTTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp CAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAAGCGAGAGTTAGCCTCTaGAGAACTGGAGGCCCAGTC +
Preference number: 4 (lower is better)
Translates to: QCGRHSAGDSSSSGVSTKARVSL*RTGGPV
Trigger: GACTGGGCCTCCAGTTCTTCAGAGGCTAACTCTCGC...TTTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp GAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGTGTTTTGTGGGAGTCTaGCAGCGAGAGTTAGCCTCT +
Preference number: 4 (lower is better)
Translates to: EHESQDSAATISAAVGPGCFVGV*QRELAS
Trigger: AGAGGCTAACTCTCGCTGTCAGACTCCCACAAAACA...CCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp CTTGGAGCGGGGGTTGTGGAGCATGGCATACTCCTTTGCTCCTTCCAGCAAAAGTCCACTACGCAGAGTTaGGGTGGGGCTGGACTAGCC +
Preference number: 4 (lower is better)
Translates to: LGAGVVEHGILLCSFQQKSTTQS*GGAGLA
Trigger: GGCTAGTCCAGCCCCACCTCAACTCTGCGTAGTGGA...CTTTTGCTGGAAGGAGCAAAGGAGTATGCCATGCTCCACAACCCCCGCTCCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000588239.5
ENST00000588897.5
CDS-3UTR TCA 90 bp TTCCACAGGCTCCGAGGGTGCTTCCACTACGCAGAGTTGAGGTGGGGCTGGACTTCTGTGAGGGGTTCATaGGCTCATCTGTTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: FHRLRGCFHYAELRWGWTSVRGS*AHLLAA
Trigger: AGCTGCCAACAGATGAGCTCATGAACCCCTCACAGA...AGTCCAGCCCCACCTCAACTCTGCGTAGTGGAAGCACCCTCGGAGCCTGTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588239.5
ENST00000588897.5
CDS-3UTR TCA 90 bp TGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAAGCCAAGCACAGACTCCTTTATaGAGGTGCCCCATCCGGCCA +
Preference number: 4 (lower is better)
Translates to: WETQCRRLEQQWCEHESQAQTPL*RCPIRP
Trigger: TGGCCGGATGGGGCACCTTCATAAAGGAGTCTGTGC...TTGGCTTTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp GTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCGCACAGACTCCTTTATaGAGGTGCCCCATCCGGCCA +
Preference number: 4 (lower is better)
Translates to: VSQCGRHSAGDSSSSGVSAQTPL*RCPIRP
Trigger: TGGCCGGATGGGGCACCTTCATAAAGGAGTCTGTGC...GCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp GGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGGCACAGACTCCTTTATaGAGGTGCCCCATCCGGCCA +
Preference number: 4 (lower is better)
Translates to: GFSVWETQCRRLEQQWCEAQTPL*RCPIRP
Trigger: TGGCCGGATGGGGCACCTTCATAAAGGAGTCTGTGC...CTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp GGGGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGCGATCCCCACGTACTTaGGAGCATCAGCTTGGCTGT +
Preference number: 4 (lower is better)
Translates to: GVSQCGRHSAGDSSSSGVRSPRT*EHQLGC
Trigger: ACAGCCAAGCTGATGCTCTCAAGTACGTGGGGATCG...CACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp CCTGGGACAGGTGGTCTACCTGCTTCTTCTCCCACTTCAGATACCCTCTGCCAGCGAGCAGCAGTGGTGTaGGCACGAAAGCCAAGACAG +
Preference number: 4 (lower is better)
Translates to: PGTGGLPASSPTSDTLCQRAAVV*ARKPRQ
Trigger: CTGTCTTGGCTTTCGTGCTCACACCACTGCTGCTCG...CTGGCAGAGGGTATCTGAAGTGGGAGAAGAAGCAGGTAGACCACCTGTCCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR TCA 90 bp TTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACCGAGCAGCAGTGGTGTaGGCACGAAAGCCAAGACAG +
Preference number: 4 (lower is better)
Translates to: FSVWETQCRRLEQQWCEHRAAVV*ARKPRQ
Trigger: CTGTCTTGGCTTTCGTGCTCACACCACTGCTGCTCG...GTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp GGTGGGAGGAGCTTTCTGTCAGGAGTTGCTGGGTGCGGGGTACGTGTGTGCCCTTGTCTCCCCTCTCATTaGGACAGTTTTGTGCCCTCT +
Preference number: 4 (lower is better)
Translates to: GGRSFLSGVAGCGVRVCPCLPSH*DSFVPS
Trigger: AGAGGGCACAAAACTGTCTCAATGAGAGGGGAGACA...AGGGCACACACGTACCCCGCACCCAGCAACTCCTGACAGAAAGCTCCTCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR TCA 90 bp CACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGAGGTGTCTCCCCTCTCATTaGGACAGTTTTGTGCCCTCT +
Preference number: 4 (lower is better)
Translates to: HESQDSAATISAAVGPGRCLPSH*DSFVPS
Trigger: AGAGGGCACAAAACTGTCTCAATGAGAGGGGAGACA...CCTCCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000592743.5
CDS-3UTR TCA 90 bp GAGAAGCCTGCTCCCTACTGTAACACTCCCAGGCCAATCTATACCCGCCCACACGAAGAAGCGGGGCTCTaGGTCCCAGAAAGAAGGGAG +
Preference number: 4 (lower is better)
Translates to: EKPAPYCNTPRPIYTRPHEEAGL*VPERRE
Trigger: CTCCCTTCTTTCTGGGACTCAGAGCCCCGCTTCTTC...GTGTGGGCGGGTATAGATTGGCCTGGGAGTGTTACAGTAGGGAGCAGGCTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR TCA 90 bp CCCGCTGCACAGACTTGGCATTGGGGCCATCGATGTTGGGTGTGCACTGAGGGGACAGGCTTCATTGACTaGACAGGTTGGACACGAAGC +
Preference number: 4 (lower is better)
Translates to: PAAQTWHWGHRCWVCTEGTGFID*TGWTRS
Trigger: GCTTCGTGTCCAACCTGTTCAGTCAATGAAGCCTGT...CCCCTCAGTGCACACCCAACATCGATGGCCCCAATGCCAAGTCTGTGCAGCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
CDS-3UTR TCA 90 bp GAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGACAGGCTTCATTGACTaGACAGGTTGGACACGAAGC +
Preference number: 4 (lower is better)
Translates to: EHESQDSAATISAAVGPGTGFID*TGWTRS
Trigger: GCTTCGTGTCCAACCTGTTCAGTCAATGAAGCCTGT...CCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp CTGACTATGTGGTGCCTTCTCCGGCGACGACCAGAGCACTTGGAGCGGGGGTTGACTCACAGGCTTCATTaGCTGAACAGGTTGGACACG +
Preference number: 4 (lower is better)
Translates to: LTMWCLLRRRPEHLERGLTHRLH*LNRLDT
Trigger: CGTGTCCAACCTGTTCAGTCAATGAAGCCTGTGAGT...CAACCCCCGCTCCAAGTGCTCTGGTCGTCGCCGGAGAAGGCACCACATAGTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588897.5
CDS-3UTR GCA 90 bp TGCCAGAGAGGGTGGCACCACAGCCTGGGACAGGTGGTCTACCTGCTTCTTCTCCATCGATGTTGGGTGTaGACTGAGGGGGAAGTGCAT +
Preference number: 4 (lower is better)
Translates to: CQRGWHHSLGQVVYLLLLHRCWV*TEGEVH
Trigger: ATGCACTTCCCCCTCAGTGCACACCCAACATCGATG...GAGAAGAAGCAGGTAGACCACCTGTCCCAGGCTGTGGTGCCACCCTCTCTGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp TGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTAGAGATTGCTCCCGCTaGACAGACTTGGCATTGGGG +
Preference number: 4 (lower is better)
Translates to: CEHESQDSAATISAAVGPRDCSR*TDLALG
Trigger: CCCCAATGCCAAGTCTGTGCAGCGGGAGCAATCTCT...AGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp TGCCAGAGAGGGTGGCACCACAGCCTGGGACAGGTGGTCTACCTGCTTCTTCTCAAGGAGTGCAGAGATTaGTCCCGCTGCACAGACTTG +
Preference number: 4 (lower is better)
Translates to: CQRGWHHSLGQVVYLLLLKECRD*SRCTDL
Trigger: CAAGTCTGTGCAGCGGGAGCAATCTCTGCACTCCTT...GAGAAGAAGCAGGTAGACCACCTGTCCCAGGCTGTGGTGCCACCCTCTCTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp TGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTAGTGTGTGGAAGGAGTaGAGAGATTGCTCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: CEHESQDSAATISAAVGPSVWKE*RDCSRC
Trigger: GCAGCGGGAGCAATCTCTGCACTCCTTCCACACACT...AGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp GGGGGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTAGTGTGTGGAAGGAGTaGAGAGATTGCTCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: GGFSVWETQCRRLEQQWCSVWKE*RDCSRC
Trigger: GCAGCGGGAGCAATCTCTGCACTCCTTCCACACACT...ACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp CCTGGGACAGGTGGTCTACCTGCTTCTTCTCCCACTTCAGATACCCTCTGCCAGGCACTGACTATGTGGTaGCTTCTCCGGCGACGACCA +
Preference number: 4 (lower is better)
Translates to: PGTGGLPASSPTSDTLCQALTMW*LLRRRP
Trigger: TGGTCGTCGCCGGAGAAGGCACCACATAGTCAGTGC...CTGGCAGAGGGTATCTGAAGTGGGAGAAGAAGCAGGTAGACCACCTGTCCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp CAGCGAGAGTTAGCCTCTGAAGAACTGGAGGCCCAGTCATTGCCTGTGTCCCTGGCACTGACTATGTGGTaGCTTCTCCGGCGACGACCA +
Preference number: 4 (lower is better)
Translates to: QRELASEELEAQSLPVSLALTMW*LLRRRP
Trigger: TGGTCGTCGCCGGAGAAGGCACCACATAGTCAGTGC...CAGGGACACAGGCAATGACTGGGCCTCCAGTTCTTCAGAGGCTAACTCTCGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586935.5
ENST00000588239.5
ENST00000588897.5
CDS-3UTR GCA 90 bp TGTGGAAGGAGTGCAGAGATTGCTCCCGCTGCACAGACTTGGCATTGGGGCCATGCACTGACTATGTGGTaGCTTCTCCGGCGACGACCA +
Preference number: 4 (lower is better)
Translates to: CGRSAEIAPAAQTWHWGHALTMW*LLRRRP
Trigger: TGGTCGTCGCCGGAGAAGGCACCACATAGTCAGTGC...ATGGCCCCAATGCCAAGTCTGTGCAGCGGGAGCAATCTCTGCACTCCTTCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588897.5
CDS-3UTR GCA 90 bp CAGTGGTGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGCACTGACTATGTGGTaGCTTCTCCGGCGACGACCA +
Preference number: 4 (lower is better)
Translates to: QWCEHESQDSAATISAAVALTMW*LLRRRP
Trigger: TGGTCGTCGCCGGAGAAGGCACCACATAGTCAGTGC...CACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACACCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp TCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAGCACTGACTATGTGGTaGCTTCTCCGGCGACGACCA +
Preference number: 4 (lower is better)
Translates to: SVWETQCRRLEQQWCEHEALTMW*LLRRRP
Trigger: TGGTCGTCGCCGGAGAAGGCACCACATAGTCAGTGC...TTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp CTTCAGATACCCTCTGCCAGTGTGCCCTGCACACGGGGTGCCAGCCTAAACGCGACTGAAAGACCTGCTTaGACGTCTTGGTCCCCAGAA +
Preference number: 4 (lower is better)
Translates to: LQIPSASVPCTRGASLNATERPA*TSWSPE
Trigger: TTCTGGGGACCAAGACGTGCAAGCAGGTCTTTCAGT...CGCGTTTAGGCTGGCACCCCGTGTGCAGGGCACACTGGCAGAGGGTATCTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp GAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGACTGAAAGACCTGCTTaGACGTCTTGGTCCCCAGAA +
Preference number: 4 (lower is better)
Translates to: EHESQDSAATISAAVGPGTERPA*TSWSPE
Trigger: TTCTGGGGACCAAGACGTGCAAGCAGGTCTTTCAGT...CCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp CTTCAGATACCCTCTGCCAGTGTGCCCTGCACACGGGGTGCCAGCCTAAACGCGTCTGACAGTCTGGGTTaGACTGGCAGAACTTCTCAC +
Preference number: 4 (lower is better)
Translates to: LQIPSASVPCTRGASLNASDSLG*TGRTSH
Trigger: GTGAGAAGTTCTGCCAGTGCAACCCAGACTGTCAGA...CGCGTTTAGGCTGGCACCCCGTGTGCAGGGCACACTGGCAGAGGGTATCTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp CCTGGGACAGGTGGTCTACCTGCTTCTTCTCCCACTTCAGATACCCTCTGCCAGGTGTGGGAGACACAGTaGAGGAGACTCGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: PGTGGLPASSPTSDTLCQVWETQ*RRLEQQ
Trigger: CTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACAC...CTGGCAGAGGGTATCTGAAGTGGGAGAAGAAGCAGGTAGACCACCTGTCCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp TTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAGTTCAGTCTGTGCTaGCTGCCAGGCTCGCCTCTA +
Preference number: 4 (lower is better)
Translates to: FSVWETQCRRLEQQWCEHEFSLC*LPGSPL
Trigger: TAGAGGCGAGCCTGGCAGGCAGCACAGACTGAACTC...GTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp TCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAGAGTTCAGTCTGTGCTaGCTGCCAGGCTCGCCTCTA +
Preference number: 4 (lower is better)
Translates to: SVWETQCRRLEQQWCEHEEFSLC*LPGSPL
Trigger: TAGAGGCGAGCCTGGCAGGCAGCACAGACTGAACTC...TTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp GAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGTCCCCCAGCCTTGAATaGCTGTACTTAGAACCCACA +
Preference number: 4 (lower is better)
Translates to: EHESQDSAATISAAVGPGSPSLE*LYLEPT
Trigger: TGTGGGTTCTAAGTACAGGCATTCAAGGCTGGGGGA...CCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp GAAGGGAGAAGCCTGCTCCCTACTGTAACACTCCCAGGCCAATCTATACCCGCCTCCAGCGAGCCAGGATaGTCACACCTGCCAGGCATA +
Preference number: 4 (lower is better)
Translates to: EGRSLLPTVTLPGQSIPASSEPG*SHLPGI
Trigger: TATGCCTGGCAGGTGTGAGCATCCTGGCTCGCTGGA...GGCGGGTATAGATTGGCCTGGGAGTGTTACAGTAGGGAGCAGGCTTCTCCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp GTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCTCCAGCGAGCCAGGATaGTCACACCTGCCAGGCATA +
Preference number: 4 (lower is better)
Translates to: VSQCGRHSAGDSSSSGVSSSEPG*SHLPGI
Trigger: TATGCCTGGCAGGTGTGAGCATCCTGGCTCGCTGGA...GCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp AGTCTGTGCTGCCTGCCAGGCTCGCCTCTAACCCAGACCACTTGTAGGCTCCAGTTTGCTCTGCATGAATaGCAGAGAGGGTGGCACCAC +
Preference number: 4 (lower is better)
Translates to: SLCCLPGSPLTQTTCRLQFALHE*QRGWHH
Trigger: GTGGTGCCACCCTCTCTGGCATTCATGCAGAGCAAA...CTGGAGCCTACAAGTGGTCTGGGTTAGAGGCGAGCCTGGCAGGCAGCACAGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp AGTCTGTGCTGCCTGCCAGGCTCGCCTCTAACCCAGACCACTTGTAGGCTCCAGCAGATTTCAGGATCATaGTGGGGCCTGGCCCATTTG +
Preference number: 4 (lower is better)
Translates to: SLCCLPGSPLTQTTCRLQQISGS*WGLAHL
Trigger: CAAATGGGCCAGGCCCCAGCATGATCCTGAAATCTG...CTGGAGCCTACAAGTGGTCTGGGTTAGAGGCGAGCCTGGCAGGCAGCACAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp CCCGCTGCACAGACTTGGCATTGGGGCCATCGATGTTGGGTGTGCACTGAGGGGGAGGGGGAAGTGCATTaGGGTCTGACATCTCTGTTA +
Preference number: 4 (lower is better)
Translates to: PAAQTWHWGHRCWVCTEGEGEVH*GLTSLL
Trigger: TAACAGAGATGTCAGACCCCAATGCACTTCCCCCTC...CCCCTCAGTGCACACCCAACATCGATGGCCCCAATGCCAAGTCTGTGCAGCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
CDS-3UTR CCA 90 bp ACAAACCACGGCGGATGCAGATTTCAGGATCATGCTGGGGCCTGGCCCATTTGGTGGGGCCATCGATGTTaGGTGTGCACTGAGGGGGAA +
Preference number: 4 (lower is better)
Translates to: TNHGGCRFQDHAGAWPIWWGHRC*VCTEGE
Trigger: TTCCCCCTCAGTGCACACCCAACATCGATGGCCCCA...CCAAATGGGCCAGGCCCCAGCATGATCCTGAAATCTGCATCCGCCGTGGTTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp TGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAAGCCAATGGGGCCATCGATGTTaGGTGTGCACTGAGGGGGAA +
Preference number: 4 (lower is better)
Translates to: WETQCRRLEQQWCEHESQWGHRC*VCTEGE
Trigger: TTCCCCCTCAGTGCACACCCAACATCGATGGCCCCA...TTGGCTTTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp GGGGGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGCACAGACTTGGCATTaGGGCCATCGATGTTGGGTG +
Preference number: 4 (lower is better)
Translates to: GGFSVWETQCRRLEQQWCAQTWH*GHRCWV
Trigger: CACCCAACATCGATGGCCCCAATGCCAAGTCTGTGC...ACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp GGGGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGGCACAGACTTGGCATTaGGGCCATCGATGTTGGGTG +
Preference number: 4 (lower is better)
Translates to: GVSQCGRHSAGDSSSSGVAQTWH*GHRCWV
Trigger: CACCCAACATCGATGGCCCCAATGCCAAGTCTGTGC...CACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp TTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACCCCGCTGCACAGACTTaGCATTGGGGCCATCGATGT +
Preference number: 4 (lower is better)
Translates to: FSVWETQCRRLEQQWCEHPAAQT*HWGHRC
Trigger: ACATCGATGGCCCCAATGCCAAGTCTGTGCAGCGGG...GTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp AGGCTCCGAGGGTGCTTCCACTACGCAGAGTTGAGGTGGGGCTGGACTAGCCTTGGGGGTTGTGGAGCATaGCATACTCCTTTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: RLRGCFHYAELRWGWTSLGGCGA*HTPLLL
Trigger: AAGGAGCAAAGGAGTATGCCATGCTCCACAACCCCC...AAGGCTAGTCCAGCCCCACCTCAACTCTGCGTAGTGGAAGCACCCTCGGAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586935.5
ENST00000588239.5
ENST00000588897.5
CDS-3UTR CCA 90 bp TTCCACAGGCTCCGAGGGTGCTTCCACTACGCAGAGTTGAGGTGGGGCTGGACTTTGGAGCGGGGGTTGTaGAGCATGGCATACTCCTTT +
Preference number: 4 (lower is better)
Translates to: FHRLRGCFHYAELRWGWTLERGL*SMAYSF
Trigger: AAAGGAGTATGCCATGCTCCACAACCCCCGCTCCAA...AGTCCAGCCCCACCTCAACTCTGCGTAGTGGAAGCACCCTCGGAGCCTGTGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586935.5
ENST00000588239.5
ENST00000588897.5
CDS-3UTR CCA 90 bp TGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGAAGCACTGACTATGTaGTGCCTTCTCCGGCGACGA +
Preference number: 4 (lower is better)
Translates to: CEHESQDSAATISAAVGPEALTM*CLLRRR
Trigger: TCGTCGCCGGAGAAGGCACCACATAGTCAGTGCTTC...AGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp CAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAACCTGCTTGCACGTCTTaGTCCCCAGAAGCCTGGCTA +
Preference number: 4 (lower is better)
Translates to: QCGRHSAGDSSSSGVSTKPACTS*SPEAWL
Trigger: TAGCCAGGCTTCTGGGGACCAAGACGTGCAAGCAGG...TTTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp TTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACCCTGCTTGCACGTCTTaGTCCCCAGAAGCCTGGCTA +
Preference number: 4 (lower is better)
Translates to: FSVWETQCRRLEQQWCEHPACTS*SPEAWL
Trigger: TAGCCAGGCTTCTGGGGACCAAGACGTGCAAGCAGG...GTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp GAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGTGCTTGGTATTGCACTaGGTCTTACAGCGACAGCCA +
Preference number: 4 (lower is better)
Translates to: EHESQDSAATISAAVGPGCLVLH*VLQRQP
Trigger: TGGCTGTCGCTGTAAGACCCAGTGCAATACCAAGCA...CCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp GGGGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGGGGGGTTTCTCAGTGTaGGAGACACAGTGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: GVSQCGRHSAGDSSSSGVGGFSV*ETQCRR
Trigger: TCTCCTGCACTGTGTCTCCCACACTGAGAAACCCCC...CACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACCCC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp TGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGGGTTTCTCAGTGTaGGAGACACAGTGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: CEHESQDSAATISAAVGPGGFSV*ETQCRR
Trigger: TCTCCTGCACTGTGTCTCCCACACTGAGAAACCCCC...AGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp GAAGGGAGAAGCCTGCTCCCTACTGTAACACTCCCAGGCCAATCTATACCCGCCACAGAGGGAGTGGGTTaGGGGGTTTCTCAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: EGRSLLPTVTLPGQSIPATEGVG*GVSQCG
Trigger: CCCACACTGAGAAACCCCCCAACCCACTCCCTCTGT...GGCGGGTATAGATTGGCCTGGGAGTGTTACAGTAGGGAGCAGGCTTCTCCCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp CAGTGGTGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGACAGAGGGAGTGGGTTaGGGGGTTTCTCAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: QWCEHESQDSAATISAAVTEGVG*GVSQCG
Trigger: CCCACACTGAGAAACCCCCCAACCCACTCCCTCTGT...CACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACACCACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp TGCCAGAGAGGGTGGCACCACAGCCTGGGACAGGTGGTCTACCTGCTTCTTCTCCTGGTTCTCCCTCTCTaGCTAAGGAAGGATGGCGTA +
Preference number: 4 (lower is better)
Translates to: CQRGWHHSLGQVVYLLLLLVLPL*LRKDGV
Trigger: TACGCCATCCTTCCTTAGCCAGAGAGGGAGAACCAG...GAGAAGAAGCAGGTAGACCACCTGTCCCAGGCTGTGGTGCCACCCTCTCTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp GGGGGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGGAGCTGGAGCACTaGTGTCTGTTCCCAGGAATC +
Preference number: 4 (lower is better)
Translates to: GGFSVWETQCRRLEQQWCEELEH*CLFPGI
Trigger: GATTCCTGGGAACAGACACCAGTGCTCCAGCTCCTC...ACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp AGTCTGTGCTGCCTGCCAGGCTCGCCTCTAACCCAGACCACTTGTAGGCTCCAGGAACTTTGGAGGAGCTaGAGCACTGGTGTCTGTTCC +
Preference number: 4 (lower is better)
Translates to: SLCCLPGSPLTQTTCRLQELWRS*STGVCS
Trigger: GGAACAGACACCAGTGCTCCAGCTCCTCCAAAGTTC...CTGGAGCCTACAAGTGGTCTGGGTTAGAGGCGAGCCTGGCAGGCAGCACAGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp TCACGCATAAGTCATCCACCCCAGCCTGTGCTCGCTTCTTCTGAGGCCAGAGAACCCCTCCCTCAGGAGTaGGATTTAGGCAGGGACCCT +
Preference number: 4 (lower is better)
Translates to: SRISHPPQPVLASSEAREPLPQE*DLGRDP
Trigger: AGGGTCCCTGCCTAAATCCCACTCCTGAGGGAGGGG...TTCTCTGGCCTCAGAAGAAGCGAGCACAGGCTGGGGTGGATGACTTATGCGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp AGTCTGTGCTGCCTGCCAGGCTCGCCTCTAACCCAGACCACTTGTAGGCTCCAGGAGATGAGACAGGACTaGAGGAGAATCTCCCACCCT +
Preference number: 4 (lower is better)
Translates to: SLCCLPGSPLTQTTCRLQEMRQD*RRISHP
Trigger: AGGGTGGGAGATTCTCCTCCAGTCCTGTCTCATCTC...CTGGAGCCTACAAGTGGTCTGGGTTAGAGGCGAGCCTGGCAGGCAGCACAGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp CAGTGGTGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGTCTGTCAGGAGTTGCTaGGTGCGGGGTACGTGTGTG +
Preference number: 4 (lower is better)
Translates to: QWCEHESQDSAATISAAVSVRSC*VRGTCV
Trigger: CACACACGTACCCCGCACCCAGCAACTCCTGACAGA...CACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACACCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp CAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAACCTGGCCCATTTGGGTaGGAGGAGCTTTCTGTCAGG +
Preference number: 4 (lower is better)
Translates to: QCGRHSAGDSSSSGVSTKPGPFG*EELSVR
Trigger: CCTGACAGAAAGCTCCTCCCACCCAAATGGGCCAGG...TTTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp CTGTCTCCCCTCTCATTGAGACAGTTTTGTGCCCTCTGGACATGGCAGAGGCCTGGGGCCTGGCCCATTTaGGTGGGAGGAGCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: LSPLSLRQFCALWTWQRPGAWPI*VGGAFC
Trigger: ACAGAAAGCTCCTCCCACCCAAATGGGCCAGGCCCC...AGGCCTCTGCCATGTCCAGAGGGCACAAAACTGTCTCAATGAGAGGGGAGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp CAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAACCATCCATCATGACGTaGTGGGGAGGGGTTGAGACC +
Preference number: 4 (lower is better)
Translates to: QCGRHSAGDSSSSGVSTKPSIMT*WGGVET
Trigger: GGTCTCAACCCCTCCCCACCACGTCATGATGGATGG...TTTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR CAA 72 bp ACTATGTGGTGCCTTCTCCGGCGACGACCAGAGCACTaGGAGCGGGGGTTGTGGAGCATGGCATACTCCTTT +
Preference number: 4 (lower is better)
Translates to: TMWCLLRRRPEH*ERGLWSMAYSF
Trigger: AAAGGAGTATGCCATGCTCCACAACCCCCGCTCCAAGTGCTCTGGTCGTCGCCGGAGAAGGCACCACATAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588239.5
ENST00000588897.5
3UTR CAA 72 bp TTCCACAGGCTCCGAGGGTGCTTCCACTACGCAGAGTaGAGGTGGGGCTGGACTAGCCTTCTGTTTTGTGGG +
Preference number: 4 (lower is better)
Translates to: FHRLRGCFHYAE*RWGWTSLLFCG
Trigger: CCCACAAAACAGAAGGCTAGTCCAGCCCCACCTCAACTCTGCGTAGTGGAAGCACCCTCGGAGCCTGTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586935.5
ENST00000588239.5
ENST00000588897.5
CDS-3UTR TCA 90 bp CCCCAGTCCATTCCACAGGCTCCGAGGGTGCTTCCACTACGCAGAGTTGAGGTGTCCTCATCTGAGTACTaGTTCAGGGCATCGACCAAC +
Preference number: 4 (lower is better)
Translates to: PQSIPQAPRVLPLRRVEVSSSEY*FRASTN
Trigger: GTTGGTCGATGCCCTGAATCAGTACTCAGATGAGGA...CACCTCAACTCTGCGTAGTGGAAGCACCCTCGGAGCCTGTGGAATGGACTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586935.5
ENST00000588897.5
CDS-3UTR TCA 90 bp GCCTGGGACAGGTGGTCTACCTGCTTCTTCTCCCACTTCAGATACCCTCTGCCATGGAGCAGGAAGCACTaGCTATGTGGTGCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: AWDRWSTCFFSHFRYPLPWSRKH*LCGAFS
Trigger: GGAGAAGGCACCACATAGTCAGTGCTTCCTGCTCCA...TGGCAGAGGGTATCTGAAGTGGGAGAAGAAGCAGGTAGACCACCTGTCCCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR TCA 90 bp CAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAATGGAGCAGGAAGCACTaGCTATGTGGTGCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: QCGRHSAGDSSSSGVSTKWSRKH*LCGAFS
Trigger: GGAGAAGGCACCACATAGTCAGTGCTTCCTGCTCCA...TTTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp CACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGAGGTCTTTGACTGCAAACTaGAAGACCTGCTTGCACGTC +
Preference number: 4 (lower is better)
Translates to: HESQDSAATISAAVGPGRSLTAN*KTCLHV
Trigger: GACGTGCAAGCAGGTCTTTCAGTTTGCAGTCAAAGA...CCTCCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp CACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGAGGTTCTCACAGAAATTCTaGGTCATGATGCAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: HESQDSAATISAAVGPGRFSQKF*VMMQGQ
Trigger: CTGCCCCTGCATCATGACTCAGAATTTCTGTGAGAA...CCTCCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp CAGTGGTGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGCCAGGGAAACGATTCTaGCAGTCTGGGTTGCACTGG +
Preference number: 4 (lower is better)
Translates to: QWCEHESQDSAATISAAVPGKRF*QSGLHW
Trigger: CCAGTGCAACCCAGACTGTCAGAATCGTTTCCCTGG...CACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACACCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp TTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACCCAGGGAAACGATTCTaGCAGTCTGGGTTGCACTGG +
Preference number: 4 (lower is better)
Translates to: FSVWETQCRRLEQQWCEHPGKRF*QSGLHW
Trigger: CCAGTGCAACCCAGACTGTCAGAATCGTTTCCCTGG...GTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp GTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCCGATCAGCCTCATCCTaGGAGATGAGCTCACCACAG +
Preference number: 4 (lower is better)
Translates to: VSQCGRHSAGDSSSSGVSRSASS*EMSSPQ
Trigger: CTGTGGTGAGCTCATCTCTCAGGATGAGGCTGATCG...GCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp GGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCGATCAGCCTCATCCTaGGAGATGAGCTCACCACAG +
Preference number: 4 (lower is better)
Translates to: GFSVWETQCRRLEQQWCERSASS*EMSSPQ
Trigger: CTGTGGTGAGCTCATCTCTCAGGATGAGGCTGATCG...CTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp CAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAACGATCAGCCTCATCCTaGGAGATGAGCTCACCACAG +
Preference number: 4 (lower is better)
Translates to: QCGRHSAGDSSSSGVSTKRSASS*EMSSPQ
Trigger: CTGTGGTGAGCTCATCTCTCAGGATGAGGCTGATCG...TTTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp TCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAACGATCCCCACGTACTTaGGAGCATCAGCTTGGCTGT +
Preference number: 4 (lower is better)
Translates to: SVWETQCRRLEQQWCEHERSPRT*EHQLGC
Trigger: ACAGCCAAGCTGATGCTCTCAAGTACGTGGGGATCG...TTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp GGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCGATCCCCACGTACTTaGGAGCATCAGCTTGGCTGT +
Preference number: 4 (lower is better)
Translates to: GFSVWETQCRRLEQQWCERSPRT*EHQLGC
Trigger: ACAGCCAAGCTGATGCTCTCAAGTACGTGGGGATCG...CTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp TCTGTCTCCCCTCTCATTGAGACAGTTTTGTGCCCTCTGGACATGGCAGAGGCCCGAGCAGCAGTGGTGTaGGCACGAAAGCCAAGACAG +
Preference number: 4 (lower is better)
Translates to: SVSPLIETVLCPLDMAEARAAVV*ARKPRQ
Trigger: CTGTCTTGGCTTTCGTGCTCACACCACTGCTGCTCG...GGCCTCTGCCATGTCCAGAGGGCACAAAACTGTCTCAATGAGAGGGGAGACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000592743.5
CDS-3UTR TCA 90 bp GTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCGGGAACTGCCTAAGTTaGTTCCTGAGGCCACAGCCT +
Preference number: 4 (lower is better)
Translates to: VSQCGRHSAGDSSSSGVSGNCLS*FLRPQP
Trigger: AGGCTGTGGCCTCAGGAATCAACTTAGGCAGTTCCC...GCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR TCA 90 bp TGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAAGCCAATGCCCTCCAGTGTGGTaGGTGAGAGCATGTGAGTGT +
Preference number: 4 (lower is better)
Translates to: WETQCRRLEQQWCEHESQCPPVW*VRACEC
Trigger: ACACTCACATGCTCTCACTCACCACACTGGAGGGCA...TTGGCTTTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR TCA 90 bp GAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGGAACAGGAGTATTCATaGACTGAAGCTGGGACAGGA +
Preference number: 4 (lower is better)
Translates to: EHESQDSAATISAAVGPGEQEYS*TEAGTG
Trigger: TCCTGTCCCAGCTTCAGTTCATGAATACTCCTGTTC...CCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp TTCTGTCAGGAGTTGCTGGGTGCGGGGTACGTGTGTGCCCTCCAGTGTGGTGAGTCTGAGGTGTCATTGTaGCCTTCCTCCTCCTCATCT +
Preference number: 4 (lower is better)
Translates to: FCQELLGAGYVCALQCGESEVSL*PSSSSS
Trigger: AGATGAGGAGGAGGAAGGGCACAATGACACCTCAGA...CTCACCACACTGGAGGGCACACACGTACCCCGCACCCAGCAACTCCTGACAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp CAGTCCATTCCACAGGCTCCGAGGGTGCTTCCACTACGCAGAGTTGAGGTGGGGTCTGAGGTGTCATTGTaGCCTTCCTCCTCCTCATCT +
Preference number: 4 (lower is better)
Translates to: QSIPQAPRVLPLRRVEVGSEVSL*PSSSSS
Trigger: AGATGAGGAGGAGGAAGGGCACAATGACACCTCAGA...CCCCACCTCAACTCTGCGTAGTGGAAGCACCCTCGGAGCCTGTGGAATGGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586935.5
ENST00000588897.5
CDS-3UTR GCA 90 bp GGGGGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTCATCGATGTTGGGTGTaGACTGAGGGGGAAGTGCAT +
Preference number: 4 (lower is better)
Translates to: GGFSVWETQCRRLEQQWCHRCWV*TEGEVH
Trigger: ATGCACTTCCCCCTCAGTGCACACCCAACATCGATG...ACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp GAGAAGCCTGCTCCCTACTGTAACACTCCCAGGCCAATCTATACCCGCCCACACAGAGATTGCTCCCGCTaGACAGACTTGGCATTGGGG +
Preference number: 4 (lower is better)
Translates to: EKPAPYCNTPRPIYTRPHRDCSR*TDLALG
Trigger: CCCCAATGCCAAGTCTGTGCAGCGGGAGCAATCTCT...GTGTGGGCGGGTATAGATTGGCCTGGGAGTGTTACAGTAGGGAGCAGGCTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp CAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAAAGAGATTGCTCCCGCTaGACAGACTTGGCATTGGGG +
Preference number: 4 (lower is better)
Translates to: QCGRHSAGDSSSSGVSTKRDCSR*TDLALG
Trigger: CCCCAATGCCAAGTCTGTGCAGCGGGAGCAATCTCT...TTTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp GTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCAGAGATTGCTCCCGCTaGACAGACTTGGCATTGGGG +
Preference number: 4 (lower is better)
Translates to: VSQCGRHSAGDSSSSGVSRDCSR*TDLALG
Trigger: CCCCAATGCCAAGTCTGTGCAGCGGGAGCAATCTCT...GCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp AGTGTGTGGAAGGAGTGCAGAGATTGCTCCCGCTGCACAGACTTGGCATTGGGGAGAGATTGCTCCCGCTaGACAGACTTGGCATTGGGG +
Preference number: 4 (lower is better)
Translates to: SVWKECRDCSRCTDLALGRDCSR*TDLALG
Trigger: CCCCAATGCCAAGTCTGTGCAGCGGGAGCAATCTCT...CCCCAATGCCAAGTCTGTGCAGCGGGAGCAATCTCTGCACTCCTTCCACACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
CDS-3UTR GCA 90 bp GGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGAGAGATTGCTCCCGCTaGACAGACTTGGCATTGGGG +
Preference number: 4 (lower is better)
Translates to: GFSVWETQCRRLEQQWCERDCSR*TDLALG
Trigger: CCCCAATGCCAAGTCTGTGCAGCGGGAGCAATCTCT...CTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp GGGGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAAGGAGTGCAGAGATTaGTCCCGCTGCACAGACTTG +
Preference number: 4 (lower is better)
Translates to: GVSQCGRHSAGDSSSSGVKECRD*SRCTDL
Trigger: CAAGTCTGTGCAGCGGGAGCAATCTCTGCACTCCTT...CACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp GTCACAGGGGCGGTCTGGGTGGTCGCAGGGTTGGTAGTTGTACACTTGTGTGGAAAGGAGTGCAGAGATTaGTCCCGCTGCACAGACTTG +
Preference number: 4 (lower is better)
Translates to: VTGAVWVVAGLVVVHLCGKECRD*SRCTDL
Trigger: CAAGTCTGTGCAGCGGGAGCAATCTCTGCACTCCTT...TCCACACAAGTGTACAACTACCAACCCTGCGACCACCCAGACCGCCCCTGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588897.5
CDS-3UTR GCA 90 bp GTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCAGTGTGTGGAAGGAGTaGAGAGATTGCTCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: VSQCGRHSAGDSSSSGVSSVWKE*RDCSRC
Trigger: GCAGCGGGAGCAATCTCTGCACTCCTTCCACACACT...GCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp CTTGGAGCGGGGGTTGTGGAGCATGGCATACTCCTTTGCTCCTTCCAGCAAAAGGCACTGACTATGTGGTaGCTTCTCCGGCGACGACCA +
Preference number: 4 (lower is better)
Translates to: LGAGVVEHGILLCSFQQKALTMW*LLRRRP
Trigger: TGGTCGTCGCCGGAGAAGGCACCACATAGTCAGTGC...CTTTTGCTGGAAGGAGCAAAGGAGTATGCCATGCTCCACAACCCCCGCTCCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588239.5
ENST00000588897.5
CDS-3UTR GCA 90 bp TTCTGTCAGGAGTTGCTGGGTGCGGGGTACGTGTGTGCCCTCCAGTGTGGTGAGACTGAAAGACCTGCTTaGACGTCTTGGTCCCCAGAA +
Preference number: 4 (lower is better)
Translates to: FCQELLGAGYVCALQCGETERPA*TSWSPE
Trigger: TTCTGGGGACCAAGACGTGCAAGCAGGTCTTTCAGT...CTCACCACACTGGAGGGCACACACGTACCCCGCACCCAGCAACTCCTGACAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp CTCCGAGGGTGCTTCCACTACGCAGAGTTGAGGTGGGGCTGGACTAGCCTTCTGACTGAAAGACCTGCTTaGACGTCTTGGTCCCCAGAA +
Preference number: 4 (lower is better)
Translates to: LRGCFHYAELRWGWTSLLTERPA*TSWSPE
Trigger: TTCTGGGGACCAAGACGTGCAAGCAGGTCTTTCAGT...CAGAAGGCTAGTCCAGCCCCACCTCAACTCTGCGTAGTGGAAGCACCCTCGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588239.5
ENST00000588897.5
CDS-3UTR GCA 90 bp TGCCAGAGAGGGTGGCACCACAGCCTGGGACAGGTGGTCTACCTGCTTCTTCTCTCTGACAGTCTGGGTTaGACTGGCAGAACTTCTCAC +
Preference number: 4 (lower is better)
Translates to: CQRGWHHSLGQVVYLLLLSDSLG*TGRTSH
Trigger: GTGAGAAGTTCTGCCAGTGCAACCCAGACTGTCAGA...GAGAAGAAGCAGGTAGACCACCTGTCCCAGGCTGTGGTGCCACCCTCTCTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp CACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGAGGGACATTGCTTGGTATTaGACTGGGTCTTACAGCGAC +
Preference number: 4 (lower is better)
Translates to: HESQDSAATISAAVGPGRDIAWY*TGSYSD
Trigger: GTCGCTGTAAGACCCAGTGCAATACCAAGCAATGTC...CCTCCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp GAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGGACATTGCTTGGTATTaGACTGGGTCTTACAGCGAC +
Preference number: 4 (lower is better)
Translates to: EHESQDSAATISAAVGPGDIAWY*TGSYSD
Trigger: GTCGCTGTAAGACCCAGTGCAATACCAAGCAATGTC...CCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp CACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGAGGGTCACATTCTCGCACTaGCAGATAGCAAGGACATTG +
Preference number: 4 (lower is better)
Translates to: HESQDSAATISAAVGPGRVTFSH*QIARTL
Trigger: CAATGTCCTTGCTATCTGGCAGTGCGAGAATGTGAC...CCTCCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp GAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGGTCCACGCTGGATGCTaGAGTTTTTACAGGAAACCA +
Preference number: 4 (lower is better)
Translates to: EHESQDSAATISAAVGPGVHAGC*SFYRKP
Trigger: TGGTTTCCTGTAAAAACTGCAGCATCCAGCGTGGAC...CCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp GGCAGCTGGGTCAGGAGGAACCCCACTTCTTCCTTCATGGGACAACAAGTGGAGTCTAGTCCAAGCCTGTaGCCACCTACCCTGAAGCGA +
Preference number: 4 (lower is better)
Translates to: GSWVRRNPTSSFMGQQVESSPSL*PPTLKR
Trigger: TCGCTTCAGGGTAGGTGGGCACAGGCTTGGACTAGA...CTCCACTTGTTGTCCCATGAAGGAAGAAGTGGGGTTCCTCCTGACCCAGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp TTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACCTTTCTGTCAGGAGTTaGTGGGTGCGGGGTACGTGT +
Preference number: 4 (lower is better)
Translates to: FSVWETQCRRLEQQWCEHLSVRS*WVRGTC
Trigger: ACACGTACCCCGCACCCAGCAACTCCTGACAGAAAG...GTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp TTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGCACAGACTTGGCATTaGGGCCATCGATGTTGGGTG +
Preference number: 4 (lower is better)
Translates to: FSVWETQCRRLEQQWCEHAQTWH*GHRCWV
Trigger: CACCCAACATCGATGGCCCCAATGCCAAGTCTGTGC...GTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp GGGGGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTTTGGAGCGGGGGTTGTaGAGCATGGCATACTCCTTT +
Preference number: 4 (lower is better)
Translates to: GGFSVWETQCRRLEQQWCLERGL*SMAYSF
Trigger: AAAGGAGTATGCCATGCTCCACAACCCCCGCTCCAA...ACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp CTCCCTACTGTAACACTCCCAGGCCAATCTATACCCGCCCACACCCTTTCTACTGACGACCAGAGCACTTaGAGCGGGGGTTGTGGAGCA +
Preference number: 4 (lower is better)
Translates to: LPTVTLPGQSIPAHTLSTDDQST*SGGCGA
Trigger: TGCTCCACAACCCCCGCTCCAAGTGCTCTGGTCGTC...AGTAGAAAGGGTGTGGGCGGGTATAGATTGGCCTGGGAGTGTTACAGTAGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp GAGAAGCCTGCTCCCTACTGTAACACTCCCAGGCCAATCTATACCCGCCCACACGAAGCACTGACTATGTaGTGCCTTCTCCGGCGACGA +
Preference number: 4 (lower is better)
Translates to: EKPAPYCNTPRPIYTRPHEALTM*CLLRRR
Trigger: TCGTCGCCGGAGAAGGCACCACATAGTCAGTGCTTC...GTGTGGGCGGGTATAGATTGGCCTGGGAGTGTTACAGTAGGGAGCAGGCTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp CAGTGGTGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGAAGCACTGACTATGTaGTGCCTTCTCCGGCGACGA +
Preference number: 4 (lower is better)
Translates to: QWCEHESQDSAATISAAVEALTM*CLLRRR
Trigger: TCGTCGCCGGAGAAGGCACCACATAGTCAGTGCTTC...CACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACACCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp AGTCTGTGCTGCCTGCCAGGCTCGCCTCTAACCCAGACCACTTGTAGGCTCCAGGAGTTGAGGTGGGGCTaGACTAGCCTTCTGTTTTGT +
Preference number: 4 (lower is better)
Translates to: SLCCLPGSPLTQTTCRLQELRWG*TSLLFC
Trigger: ACAAAACAGAAGGCTAGTCCAGCCCCACCTCAACTC...CTGGAGCCTACAAGTGGTCTGGGTTAGAGGCGAGCCTGGCAGGCAGCACAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp CTCCGAGGGTGCTTCCACTACGCAGAGTTGAGGTGGGGCTGGACTAGCCTTCTGGAGTTGAGGTGGGGCTaGACTAGCCTTCTGTTTTGT +
Preference number: 4 (lower is better)
Translates to: LRGCFHYAELRWGWTSLLELRWG*TSLLFC
Trigger: ACAAAACAGAAGGCTAGTCCAGCCCCACCTCAACTC...CAGAAGGCTAGTCCAGCCCCACCTCAACTCTGCGTAGTGGAAGCACCCTCGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586935.5
ENST00000588239.5
ENST00000588897.5
CDS-3UTR CCA 90 bp GAAGCACTGACTATGTGGTGCCTTCTCCGGCGACGACCAGAGCACTTGGAGCGGGAGTTGAGGTGGGGCTaGACTAGCCTTCTGTTTTGT +
Preference number: 4 (lower is better)
Translates to: EALTMWCLLRRRPEHLERELRWG*TSLLFC
Trigger: ACAAAACAGAAGGCTAGTCCAGCCCCACCTCAACTC...CCGCTCCAAGTGCTCTGGTCGTCGCCGGAGAAGGCACCACATAGTCAGTGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588239.5
ENST00000588897.5
CDS-3UTR CCA 90 bp CAGTGGTGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGTACGCAGAGTTGAGGTaGGGCTGGACTAGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: QWCEHESQDSAATISAAVYAELR*GWTSLL
Trigger: CAGAAGGCTAGTCCAGCCCCACCTCAACTCTGCGTA...CACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACACCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp TTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACTACGCAGAGTTGAGGTaGGGCTGGACTAGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: FSVWETQCRRLEQQWCEHYAELR*GWTSLL
Trigger: CAGAAGGCTAGTCCAGCCCCACCTCAACTCTGCGTA...GTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp AGGGGCGGTCTGGGTGGTCGCAGGGTTGGTAGTTGTACACTTGTGTGGAAGAGTTACGCAGAGTTGAGGTaGGGCTGGACTAGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: RGGLGGRRVGSCTLVWKSYAELR*GWTSLL
Trigger: CAGAAGGCTAGTCCAGCCCCACCTCAACTCTGCGTA...ACTCTTCCACACAAGTGTACAACTACCAACCCTGCGACCACCCAGACCGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588239.5
ENST00000588897.5
CDS-3UTR CCA 90 bp CACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGAGGTGGTCCCCAGAAGCCTaGCTATTGAACAGAAGTTGT +
Preference number: 4 (lower is better)
Translates to: HESQDSAATISAAVGPGRWSPEA*LLNRSC
Trigger: ACAACTTCTGTTCAATAGCCAGGCTTCTGGGGACCA...CCTCCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp CCATTCCACAGGCTCCGAGGGTGCTTCCACTACGCAGAGTTGAGGTGGGGCTGGTGGTCCCCAGAAGCCTaGCTATTGAACAGAAGTTGT +
Preference number: 4 (lower is better)
Translates to: PFHRLRGCFHYAELRWGWWSPEA*LLNRSC
Trigger: ACAACTTCTGTTCAATAGCCAGGCTTCTGGGGACCA...CCAGCCCCACCTCAACTCTGCGTAGTGGAAGCACCCTCGGAGCCTGTGGAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588239.5
ENST00000588897.5
CDS-3UTR CCA 90 bp GAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGTGGTCCCCAGAAGCCTaGCTATTGAACAGAAGTTGT +
Preference number: 4 (lower is better)
Translates to: EHESQDSAATISAAVGPGWSPEA*LLNRSC
Trigger: ACAACTTCTGTTCAATAGCCAGGCTTCTGGGGACCA...CCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp TGGGGCTGGACTAGCCTTCTGTTTTGTGGGAGTCTGACAGCGAGAGTTAGCCTCCCTGCTTGCACGTCTTaGTCCCCAGAAGCCTGGCTA +
Preference number: 4 (lower is better)
Translates to: WGWTSLLFCGSLTARVSLPACTS*SPEAWL
Trigger: TAGCCAGGCTTCTGGGGACCAAGACGTGCAAGCAGG...GAGGCTAACTCTCGCTGTCAGACTCCCACAAAACAGAAGGCTAGTCCAGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000588239.5
ENST00000588897.5
CDS-3UTR CCA 90 bp GAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGCAGTCTGGGTTGCACTaGCAGAACTTCTCACAGAAA +
Preference number: 4 (lower is better)
Translates to: EHESQDSAATISAAVGPGQSGLH*QNFSQK
Trigger: TTTCTGTGAGAAGTTCTGCCAGTGCAACCCAGACTG...CCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp CACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGAGGAAGATCCCAATCCGATaGTCTCCATTCACCATGACC +
Preference number: 4 (lower is better)
Translates to: HESQDSAATISAAVGPGRKIPIR*SPFTMT
Trigger: GGTCATGGTGAATGGAGACCATCGGATTGGGATCTT...CCTCCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp TGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTAGACTCGAGCAGCAGTaGTGTGAGCACGAAAGCCAA +
Preference number: 4 (lower is better)
Translates to: CEHESQDSAATISAAVGPRLEQQ*CEHESQ
Trigger: TTGGCTTTCGTGCTCACACCACTGCTGCTCGAGTCT...AGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp CAGTGGTGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGGGTTTCTCAGTGTaGGAGACACAGTGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: QWCEHESQDSAATISAAVGGFSV*ETQCRR
Trigger: TCTCCTGCACTGTGTCTCCCACACTGAGAAACCCCC...CACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACACCACTG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp TGGGTCAGGAGGAACCCCACTTCTTCCTTCATGGGACAACAAGTGGAGTGGGAACCTGAGGCCACAGCCTaGGGAGCCGACACGAAATCA +
Preference number: 4 (lower is better)
Translates to: WVRRNPTSSFMGQQVEWEPEATA*GADTKS
Trigger: TGATTTCGTGTCGGCTCCCCAGGCTGTGGCCTCAGG...TTCCCACTCCACTTGTTGTCCCATGAAGGAAGAAGTGGGGTTCCTCCTGACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp GGTGGGAGGAGCTTTCTGTCAGGAGTTGCTGGGTGCGGGGTACGTGTGTGCCCTCAGGCTAGCGCTTGTTaGGAACTGCCTAAGTTGATT +
Preference number: 4 (lower is better)
Translates to: GGRSFLSGVAGCGVRVCPQASAC*ELPKLI
Trigger: AATCAACTTAGGCAGTTCCCAACAAGCGCTAGCCTG...AGGGCACACACGTACCCCGCACCCAGCAACTCCTGACAGAAAGCTCCTCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp CAGTGGTGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGAGGAGCTGGAGCACTaGTGTCTGTTCCCAGGAATC +
Preference number: 4 (lower is better)
Translates to: QWCEHESQDSAATISAAVEELEH*CLFPGI
Trigger: GATTCCTGGGAACAGACACCAGTGCTCCAGCTCCTC...CACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACACCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp ACAAACCACGGCGGATGCAGATTTCAGGATCATGCTGGGGCCTGGCCCATTTGGACAGCCTGGGACAGGTaGTCTACCTGCTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: TNHGGCRFQDHAGAWPIWTAWDR*STCFFS
Trigger: GGAGAAGAAGCAGGTAGACCACCTGTCCCAGGCTGT...CCAAATGGGCCAGGCCCCAGCATGATCCTGAAATCTGCATCCGCCGTGGTTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp TCTGTCTCCCCTCTCATTGAGACAGTTTTGTGCCCTCTGGACATGGCAGAGGCCCCTGGCCCATTTGGGTaGGAGGAGCTTTCTGTCAGG +
Preference number: 4 (lower is better)
Translates to: SVSPLIETVLCPLDMAEAPGPFG*EELSVR
Trigger: CCTGACAGAAAGCTCCTCCCACCCAAATGGGCCAGG...GGCCTCTGCCATGTCCAGAGGGCACAAAACTGTCTCAATGAGAGGGGAGACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR CAA 72 bp CAATTACAGGCTAGCGCTTGTTGGGAACTGCCTAAGTaGATTCCTGAGGCCACAGCCTGGGGAGCCGACACG +
Preference number: 4 (lower is better)
Translates to: QLQASACWELPK*IPEATAWGADT
Trigger: CGTGTCGGCTCCCCAGGCTGTGGCCTCAGGAATCAACTTAGGCAGTTCCCAACAAGCGCTAGCCTGTAATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR CAA 72 bp ATGCAGATTTCAGGATCATGCTGGGGCCTGGCCCATTaGGGTGGGAGGAGCTTTCTGTCAGGAGTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: MQISGSCWGLAH*GGRSFLSGVAG
Trigger: CCCAGCAACTCCTGACAGAAAGCTCCTCCCACCCAAATGGGCCAGGCCCCAGCATGATCCTGAAATCTGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR TCA 90 bp GGGGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGATCCTGCTTTCCATCTaGGGTGTCATTGTGCCCTTC +
Preference number: 4 (lower is better)
Translates to: GVSQCGRHSAGDSSSSGVILLSI*GVIVPF
Trigger: GAAGGGCACAATGACACCTCAGATGGAAAGCAGGAT...CACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp GGGGGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTATCCTGCTTTCCATCTaGGGTGTCATTGTGCCCTTC +
Preference number: 4 (lower is better)
Translates to: GGFSVWETQCRRLEQQWCILLSI*GVIVPF
Trigger: GAAGGGCACAATGACACCTCAGATGGAAAGCAGGAT...ACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp GCACTGACTATGTGGTGCCTTCTCCGGCGACGACCAGAGCACTTGGAGCGGGGGTTGAGGCAATTGCACTaGAGATCATGTCATTTGGGA +
Preference number: 4 (lower is better)
Translates to: ALTMWCLLRRRPEHLERGLRQLH*RSCHLG
Trigger: TCCCAAATGACATGATCTTCAGTGCAATTGCCTCAA...CCCCCGCTCCAAGTGCTCTGGTCGTCGCCGGAGAAGGCACCACATAGTCAGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588239.5
ENST00000588897.5
CDS-3UTR TCA 90 bp CTTCAGCCCCAGTCCATTCCACAGGCTCCGAGGGTGCTTCCACTACGCAGAGTTTGTTTTGTGGGAGTCTaGCAGCGAGAGTTAGCCTCT +
Preference number: 4 (lower is better)
Translates to: LQPQSIPQAPRVLPLRRVCFVGV*QRELAS
Trigger: AGAGGCTAACTCTCGCTGTCAGACTCCCACAAAACA...AACTCTGCGTAGTGGAAGCACCCTCGGAGCCTGTGGAATGGACTGGGGCTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586935.5
ENST00000588239.5
ENST00000588897.5
CDS-3UTR TCA 90 bp ACAAACCACGGCGGATGCAGATTTCAGGATCATGCTGGGGCCTGGCCCATTTGGTCTGTGAGGGGTTCATaGGCTCATCTGTTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: TNHGGCRFQDHAGAWPIWSVRGS*AHLLAA
Trigger: AGCTGCCAACAGATGAGCTCATGAACCCCTCACAGA...CCAAATGGGCCAGGCCCCAGCATGATCCTGAAATCTGCATCCGCCGTGGTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR TCA 90 bp CAGAGCACTTGGAGCGGGGGTTGTGGAGCATGGCATACTCCTTTGCTCCTTCCATCTGTGAGGGGTTCATaGGCTCATCTGTTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: QSTWSGGCGAWHTPLLLPSVRGS*AHLLAA
Trigger: AGCTGCCAACAGATGAGCTCATGAACCCCTCACAGA...TGGAAGGAGCAAAGGAGTATGCCATGCTCCACAACCCCCGCTCCAAGTGCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588239.5
ENST00000588897.5
CDS-3UTR TCA 90 bp TCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAATCTGTGAGGGGTTCATaGGCTCATCTGTTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: SVWETQCRRLEQQWCEHESVRGS*AHLLAA
Trigger: AGCTGCCAACAGATGAGCTCATGAACCCCTCACAGA...TTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp GTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCTCTGTGAGGGGTTCATaGGCTCATCTGTTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: VSQCGRHSAGDSSSSGVSSVRGS*AHLLAA
Trigger: AGCTGCCAACAGATGAGCTCATGAACCCCTCACAGA...GCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp CTGTCTCCCCTCTCATTGAGACAGTTTTGTGCCCTCTGGACATGGCAGAGGCCTCGATCCCCACGTACTTaGGAGCATCAGCTTGGCTGT +
Preference number: 4 (lower is better)
Translates to: LSPLSLRQFCALWTWQRPRSPRT*EHQLGC
Trigger: ACAGCCAAGCTGATGCTCTCAAGTACGTGGGGATCG...AGGCCTCTGCCATGTCCAGAGGGCACAAAACTGTCTCAATGAGAGGGGAGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000592743.5
CDS-3UTR TCA 90 bp CCTCTGAAGAACTGGAGGCCCAGTCATTGCCTGTGTCCCTGTCACTGTCTCCTTCGATCCCCACGTACTTaGGAGCATCAGCTTGGCTGT +
Preference number: 4 (lower is better)
Translates to: PLKNWRPSHCLCPCHCLLRSPRT*EHQLGC
Trigger: ACAGCCAAGCTGATGCTCTCAAGTACGTGGGGATCG...AAGGAGACAGTGACAGGGACACAGGCAATGACTGGGCCTCCAGTTCTTCAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588897.5
CDS-3UTR TCA 90 bp CTCCCTACTGTAACACTCCCAGGCCAATCTATACCCGCCCACACCCTTTCTACTCACACTCTTTCAGTTTaGGCCCTGCCACGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: LPTVTLPGQSIPAHTLSTHTLSV*ALPRGR
Trigger: CCTCCCTCGTGGCAGGGCTCAAACTGAAAGAGTGTG...AGTAGAAAGGGTGTGGGCGGGTATAGATTGGCCTGGGAGTGTTACAGTAGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR TCA 90 bp GCCTGGGACAGGTGGTCTACCTGCTTCTTCTCCCACTTCAGATACCCTCTGCCAAGTGATTCTGCTCACTaGAGGAAGGGTGGGGTCAGT +
Preference number: 4 (lower is better)
Translates to: AWDRWSTCFFSHFRYPLPSDSAH*RKGGVS
Trigger: ACTGACCCCACCCTTCCTTCAGTGAGCAGAATCACT...TGGCAGAGGGTATCTGAAGTGGGAGAAGAAGCAGGTAGACCACCTGTCCCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR TCA 90 bp GGGGGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTACAGGCTTCATTGACTaGACAGGTTGGACACGAAGC +
Preference number: 4 (lower is better)
Translates to: GGFSVWETQCRRLEQQWCTGFID*TGWTRS
Trigger: GCTTCGTGTCCAACCTGTTCAGTCAATGAAGCCTGT...ACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp GGGGGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTACTCACAGGCTTCATTaGCTGAACAGGTTGGACACG +
Preference number: 4 (lower is better)
Translates to: GGFSVWETQCRRLEQQWCTHRLH*LNRLDT
Trigger: CGTGTCCAACCTGTTCAGTCAATGAAGCCTGTGAGT...ACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp GGGGGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTTCTGAGGTGTCATTGTaGCCTTCCTCCTCCTCATCT +
Preference number: 4 (lower is better)
Translates to: GGFSVWETQCRRLEQQWCSEVSL*PSSSSS
Trigger: AGATGAGGAGGAGGAAGGGCACAATGACACCTCAGA...ACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp GAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGTCTTTGCTGTCATCCTaGTTTCCATCTGAGGTGTCA +
Preference number: 4 (lower is better)
Translates to: EHESQDSAATISAAVGPGSLLSS*FPSEVS
Trigger: TGACACCTCAGATGGAAAGCAGGATGACAGCAAAGA...CCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp TGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAAGCCAACATCGATGTTGGGTGTaGACTGAGGGGGAAGTGCAT +
Preference number: 4 (lower is better)
Translates to: WETQCRRLEQQWCEHESQHRCWV*TEGEVH
Trigger: ATGCACTTCCCCCTCAGTGCACACCCAACATCGATG...TTGGCTTTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp TGTGGAAGGAGTGCAGAGATTGCTCCCGCTGCACAGACTTGGCATTGGGGCCATCATCGATGTTGGGTGTaGACTGAGGGGGAAGTGCAT +
Preference number: 4 (lower is better)
Translates to: CGRSAEIAPAAQTWHWGHHRCWV*TEGEVH
Trigger: ATGCACTTCCCCCTCAGTGCACACCCAACATCGATG...ATGGCCCCAATGCCAAGTCTGTGCAGCGGGAGCAATCTCTGCACTCCTTCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
CDS-3UTR GCA 90 bp GTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCAAGGAGTGCAGAGATTaGTCCCGCTGCACAGACTTG +
Preference number: 4 (lower is better)
Translates to: VSQCGRHSAGDSSSSGVSKECRD*SRCTDL
Trigger: CAAGTCTGTGCAGCGGGAGCAATCTCTGCACTCCTT...GCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp TTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACAAGGAGTGCAGAGATTaGTCCCGCTGCACAGACTTG +
Preference number: 4 (lower is better)
Translates to: FSVWETQCRRLEQQWCEHKECRD*SRCTDL
Trigger: CAAGTCTGTGCAGCGGGAGCAATCTCTGCACTCCTT...GTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp CTGTCTCCCCTCTCATTGAGACAGTTTTGTGCCCTCTGGACATGGCAGAGGCCTAGTGTGTGGAAGGAGTaGAGAGATTGCTCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: LSPLSLRQFCALWTWQRPSVWKE*RDCSRC
Trigger: GCAGCGGGAGCAATCTCTGCACTCCTTCCACACACT...AGGCCTCTGCCATGTCCAGAGGGCACAAAACTGTCTCAATGAGAGGGGAGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000592743.5
CDS-3UTR GCA 90 bp ACTATGTGGTGCCTTCTCCGGCGACGACCAGAGCACTTGGAGCGGGGGTTGTGGCATGGCATACTCCTTTaGTCCTTCCAGCAAAAGGAA +
Preference number: 4 (lower is better)
Translates to: TMWCLLRRRPEHLERGLWHGILL*SFQQKE
Trigger: TTCCTTTTGCTGGAAGGAGCAAAGGAGTATGCCATG...CCACAACCCCCGCTCCAAGTGCTCTGGTCGTCGCCGGAGAAGGCACCACATAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588239.5
ENST00000588897.5
CDS-3UTR GCA 90 bp GAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGCATGGCATACTCCTTTaGTCCTTCCAGCAAAAGGAA +
Preference number: 4 (lower is better)
Translates to: EHESQDSAATISAAVGPGHGILL*SFQQKE
Trigger: TTCCTTTTGCTGGAAGGAGCAAAGGAGTATGCCATG...CCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp GGGGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGTCTGACAGTCTGGGTTaGACTGGCAGAACTTCTCAC +
Preference number: 4 (lower is better)
Translates to: GVSQCGRHSAGDSSSSGVSDSLG*TGRTSH
Trigger: GTGAGAAGTTCTGCCAGTGCAACCCAGACTGTCAGA...CACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp TGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTTCTGACAGTCTGGGTTaGACTGGCAGAACTTCTCAC +
Preference number: 4 (lower is better)
Translates to: CEHESQDSAATISAAVGPSDSLG*TGRTSH
Trigger: GTGAGAAGTTCTGCCAGTGCAACCCAGACTGTCAGA...AGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp TCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAACGAAAGCCAAGACAGTaGCGCTACCATAAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: SVWETQCRRLEQQWCEHERKPRQ*RYHKCC
Trigger: GCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCG...TTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp TGGGTCAGGAGGAACCCCACTTCTTCCTTCATGGGACAACAAGTGGAGTGGGAATCTGAGTTCAGTCTGTaGTGCCTGCCAGGCTCGCCT +
Preference number: 4 (lower is better)
Translates to: WVRRNPTSSFMGQQVEWESEFSL*CLPGSP
Trigger: AGGCGAGCCTGGCAGGCAGCACAGACTGAACTCAGA...TTCCCACTCCACTTGTTGTCCCATGAAGGAAGAAGTGGGGTTCCTCCTGACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp CAGTGGTGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGCCAGCCTAAACGCGTaGAATTTAGCCCCTCACCAA +
Preference number: 4 (lower is better)
Translates to: QWCEHESQDSAATISAAVASLNA*NLAPHQ
Trigger: TTGGTGAGGGGCTAAATTGCACGCGTTTAGGCTGGC...CACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACACCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp CAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAATTTGCTCTGCATGAATaGCAGAGAGGGTGGCACCAC +
Preference number: 4 (lower is better)
Translates to: QCGRHSAGDSSSSGVSTKFALHE*QRGWHH
Trigger: GTGGTGCCACCCTCTCTGGCATTCATGCAGAGCAAA...TTTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp TGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGCATGTGAGTGTGTGTaGATGTCCCATACCAAACCG +
Preference number: 4 (lower is better)
Translates to: CEHESQDSAATISAAVGPACECV*MSHTKP
Trigger: CGGTTTGGTATGGGACATGCACACACACTCACATGC...AGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp CCCGCTGCACAGACTTGGCATTGGGGCCATCGATGTTGGGTGTGCACTGAGGGGGGAGGTAGGGGGATTTaGTATTTCCATCTTGCTGTA +
Preference number: 4 (lower is better)
Translates to: PAAQTWHWGHRCWVCTEGGGRGI*YFHLAV
Trigger: TACAGCAAGATGGAAATACCAAATCCCCCTACCTCC...CCCCTCAGTGCACACCCAACATCGATGGCCCCAATGCCAAGTCTGTGCAGCGGG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
CDS-3UTR CCA 90 bp GAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGACCATAAAGTTCTGTTaGAGAGGGGACCAGGAATAC +
Preference number: 4 (lower is better)
Translates to: EHESQDSAATISAAVGPGTIKFC*RGDQEY
Trigger: GTATTCCTGGTCCCCTCTCCAACAGAACTTTATGGT...CCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp TGCCAGAGAGGGTGGCACCACAGCCTGGGACAGGTGGTCTACCTGCTTCTTCTCCTCCTTCATGTCATCTaGGACACCATTCTCAGGGAA +
Preference number: 4 (lower is better)
Translates to: CQRGWHHSLGQVVYLLLLLLHVI*DTILRE
Trigger: TTCCCTGAGAATGGTGTCCCAGATGACATGAAGGAG...GAGAAGAAGCAGGTAGACCACCTGTCCCAGGCTGTGGTGCCACCCTCTCTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp CTCCCTACTGTAACACTCCCAGGCCAATCTATACCCGCCCACACCCTTTCTACTCCCGCTGCACAGACTTaGCATTGGGGCCATCGATGT +
Preference number: 4 (lower is better)
Translates to: LPTVTLPGQSIPAHTLSTPAAQT*HWGHRC
Trigger: ACATCGATGGCCCCAATGCCAAGTCTGTGCAGCGGG...AGTAGAAAGGGTGTGGGCGGGTATAGATTGGCCTGGGAGTGTTACAGTAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp GAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGGCAGTCTGTGCCACATaGTTCTGGTTCAATCTTGAT +
Preference number: 4 (lower is better)
Translates to: EHESQDSAATISAAVGPGAVCAT*FWFNLD
Trigger: ATCAAGATTGAACCAGAACCATGTGGCACAGACTGC...CCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp GAAGGGAGAAGCCTGCTCCCTACTGTAACACTCCCAGGCCAATCTATACCCGCCGGGGGTTGTGGAGCATaGCATACTCCTTTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: EGRSLLPTVTLPGQSIPAGGCGA*HTPLLL
Trigger: AAGGAGCAAAGGAGTATGCCATGCTCCACAACCCCC...GGCGGGTATAGATTGGCCTGGGAGTGTTACAGTAGGGAGCAGGCTTCTCCCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp GGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGGGGGGTTGTGGAGCATaGCATACTCCTTTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: GFSVWETQCRRLEQQWCEGGCGA*HTPLLL
Trigger: AAGGAGCAAAGGAGTATGCCATGCTCCACAACCCCC...CTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp CAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAAGGGGGTTGTGGAGCATaGCATACTCCTTTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: QCGRHSAGDSSSSGVSTKGGCGA*HTPLLL
Trigger: AAGGAGCAAAGGAGTATGCCATGCTCCACAACCCCC...TTTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp GCCTGGGACAGGTGGTCTACCTGCTTCTTCTCCCACTTCAGATACCCTCTGCCATTGGAGCGGGGGTTGTaGAGCATGGCATACTCCTTT +
Preference number: 4 (lower is better)
Translates to: AWDRWSTCFFSHFRYPLPLERGL*SMAYSF
Trigger: AAAGGAGTATGCCATGCTCCACAACCCCCGCTCCAA...TGGCAGAGGGTATCTGAAGTGGGAGAAGAAGCAGGTAGACCACCTGTCCCAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp GAAGGGAGAAGCCTGCTCCCTACTGTAACACTCCCAGGCCAATCTATACCCGCCTTGGAGCGGGGGTTGTaGAGCATGGCATACTCCTTT +
Preference number: 4 (lower is better)
Translates to: EGRSLLPTVTLPGQSIPALERGL*SMAYSF
Trigger: AAAGGAGTATGCCATGCTCCACAACCCCCGCTCCAA...GGCGGGTATAGATTGGCCTGGGAGTGTTACAGTAGGGAGCAGGCTTCTCCCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp CGAGGGTGCTTCCACTACGCAGAGTTGAGGTGGGGCTGGACTAGCCTTCTGTTTTTGGAGCGGGGGTTGTaGAGCATGGCATACTCCTTT +
Preference number: 4 (lower is better)
Translates to: RGCFHYAELRWGWTSLLFLERGL*SMAYSF
Trigger: AAAGGAGTATGCCATGCTCCACAACCCCCGCTCCAA...AAACAGAAGGCTAGTCCAGCCCCACCTCAACTCTGCGTAGTGGAAGCACCCTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000586935.5
ENST00000588239.5
ENST00000588897.5
CDS-3UTR CCA 90 bp CAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAATTGGAGCGGGGGTTGTaGAGCATGGCATACTCCTTT +
Preference number: 4 (lower is better)
Translates to: QCGRHSAGDSSSSGVSTKLERGL*SMAYSF
Trigger: AAAGGAGTATGCCATGCTCCACAACCCCCGCTCCAA...TTTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp TTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACTTGGAGCGGGGGTTGTaGAGCATGGCATACTCCTTT +
Preference number: 4 (lower is better)
Translates to: FSVWETQCRRLEQQWCEHLERGL*SMAYSF
Trigger: AAAGGAGTATGCCATGCTCCACAACCCCCGCTCCAA...GTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp CCTCTGAAGAACTGGAGGCCCAGTCATTGCCTGTGTCCCTGTCACTGTCTCCTTGAAGCACTGACTATGTaGTGCCTTCTCCGGCGACGA +
Preference number: 4 (lower is better)
Translates to: PLKNWRPSHCLCPCHCLLEALTM*CLLRRR
Trigger: TCGTCGCCGGAGAAGGCACCACATAGTCAGTGCTTC...AAGGAGACAGTGACAGGGACACAGGCAATGACTGGGCCTCCAGTTCTTCAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586935.5
ENST00000588239.5
ENST00000588897.5
CDS-3UTR CCA 90 bp CTTGGAGCGGGGGTTGTGGAGCATGGCATACTCCTTTGCTCCTTCCAGCAAAAGTACGCAGAGTTGAGGTaGGGCTGGACTAGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: LGAGVVEHGILLCSFQQKYAELR*GWTSLL
Trigger: CAGAAGGCTAGTCCAGCCCCACCTCAACTCTGCGTA...CTTTTGCTGGAAGGAGCAAAGGAGTATGCCATGCTCCACAACCCCCGCTCCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588239.5
ENST00000588897.5
CDS-3UTR CCA 90 bp TCTGTCTCCCCTCTCATTGAGACAGTTTTGTGCCCTCTGGACATGGCAGAGGCCTACGCAGAGTTGAGGTaGGGCTGGACTAGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: SVSPLIETVLCPLDMAEAYAELR*GWTSLL
Trigger: CAGAAGGCTAGTCCAGCCCCACCTCAACTCTGCGTA...GGCCTCTGCCATGTCCAGAGGGCACAAAACTGTCTCAATGAGAGGGGAGACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000592743.5
CDS-3UTR CCA 90 bp TGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTTGCTTGGTATTGCACTaGGTCTTACAGCGACAGCCA +
Preference number: 4 (lower is better)
Translates to: CEHESQDSAATISAAVGPCLVLH*VLQRQP
Trigger: TGGCTGTCGCTGTAAGACCCAGTGCAATACCAAGCA...AGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp CTTCAGATACCCTCTGCCAGTGTGCCCTGCACACGGGGTGCCAGCCTAAACGCGAGCAAGGACATTGCTTaGTATTGCACTGGGTCTTAC +
Preference number: 4 (lower is better)
Translates to: LQIPSASVPCTRGASLNASKDIA*YCTGSY
Trigger: GTAAGACCCAGTGCAATACCAAGCAATGTCCTTGCT...CGCGTTTAGGCTGGCACCCCGTGTGCAGGGCACACTGGCAGAGGGTATCTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp CAGTCCATTCCACAGGCTCCGAGGGTGCTTCCACTACGCAGAGTTGAGGTGGGGAAGATCCCAATCCGATaGTCTCCATTCACCATGACC +
Preference number: 4 (lower is better)
Translates to: QSIPQAPRVLPLRRVEVGKIPIR*SPFTMT
Trigger: GGTCATGGTGAATGGAGACCATCGGATTGGGATCTT...CCCCACCTCAACTCTGCGTAGTGGAAGCACCCTCGGAGCCTGTGGAATGGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588897.5
CDS-3UTR CCA 90 bp CACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGAGGTTAACTACTATCATCTaGCTGGTTCTCCCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: HESQDSAATISAAVGPGRLTTII*LVLPLW
Trigger: CCAGAGAGGGAGAACCAGCCAGATGATAGTAGTTAA...CCTCCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp TGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAAGCCAATGGGCCTTGCCTCTATaGGGAATGGAAGGCCTGAAA +
Preference number: 4 (lower is better)
Translates to: WETQCRRLEQQWCEHESQWALPL*GMEGLK
Trigger: TTTCAGGCCTTCCATTCCCCATAGAGGCAAGGCCCA...TTGGCTTTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR TCA 90 bp GGGGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGGCACCCATATTTGCCTaGAGCCGTTTAAGTTGTCGA +
Preference number: 4 (lower is better)
Translates to: GVSQCGRHSAGDSSSSGVAPIFA*SRLSCR
Trigger: TCGACAACTTAAACGGCTTCAGGCAAATATGGGTGC...CACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000592743.5
CDS-3UTR TCA 90 bp TGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAAGCCAAGGTACAAGGCTTCATTaGCTGAACAGGTTGGACACG +
Preference number: 4 (lower is better)
Translates to: WETQCRRLEQQWCEHESQGTRLH*LNRLDT
Trigger: CGTGTCCAACCTGTTCAGTCAATGAAGCCTTGTACC...TTGGCTTTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415827.6
CDS-3UTR TCA 90 bp GCCTGGGACAGGTGGTCTACCTGCTTCTTCTCCCACTTCAGATACCCTCTGCCATCCTCATCTGAGTACTaGTTCAGGGCATCGACCAAC +
Preference number: 4 (lower is better)
Translates to: AWDRWSTCFFSHFRYPLPSSSEY*FRASTN
Trigger: GTTGGTCGATGCCCTGAATCAGTACTCAGATGAGGA...TGGCAGAGGGTATCTGAAGTGGGAGAAGAAGCAGGTAGACCACCTGTCCCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR TCA 90 bp GGCAGCTGGGTCAGGAGGAACCCCACTTCTTCCTTCATGGGACAACAAGTGGAGTCCTCATCTGAGTACTaGTTCAGGGCATCGACCAAC +
Preference number: 4 (lower is better)
Translates to: GSWVRRNPTSSFMGQQVESSSEY*FRASTN
Trigger: GTTGGTCGATGCCCTGAATCAGTACTCAGATGAGGA...CTCCACTTGTTGTCCCATGAAGGAAGAAGTGGGGTTCCTCCTGACCCAGCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR TCA 90 bp TTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACTCCTCATCTGAGTACTaGTTCAGGGCATCGACCAAC +
Preference number: 4 (lower is better)
Translates to: FSVWETQCRRLEQQWCEHSSSEY*FRASTN
Trigger: GTTGGTCGATGCCCTGAATCAGTACTCAGATGAGGA...GTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp CAGTGGTGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGTCCTCATCTGAGTACTaGTTCAGGGCATCGACCAAC +
Preference number: 4 (lower is better)
Translates to: QWCEHESQDSAATISAAVSSSEY*FRASTN
Trigger: GTTGGTCGATGCCCTGAATCAGTACTCAGATGAGGA...CACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACACCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp GGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGATCCTGCTTTCCATCTaGGGTGTCATTGTGCCCTTC +
Preference number: 4 (lower is better)
Translates to: GFSVWETQCRRLEQQWCEILLSI*GVIVPF
Trigger: GAAGGGCACAATGACACCTCAGATGGAAAGCAGGAT...CTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp GTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCATCCTGCTTTCCATCTaGGGTGTCATTGTGCCCTTC +
Preference number: 4 (lower is better)
Translates to: VSQCGRHSAGDSSSSGVSILLSI*GVIVPF
Trigger: GAAGGGCACAATGACACCTCAGATGGAAAGCAGGAT...GCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp CACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGAGGTTGAGGCAATTGCACTaGAGATCATGTCATTTGGGA +
Preference number: 4 (lower is better)
Translates to: HESQDSAATISAAVGPGRLRQLH*RSCHLG
Trigger: TCCCAAATGACATGATCTTCAGTGCAATTGCCTCAA...CCTCCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp GAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGTTGAGGCAATTGCACTaGAGATCATGTCATTTGGGA +
Preference number: 4 (lower is better)
Translates to: EHESQDSAATISAAVGPGLRQLH*RSCHLG
Trigger: TCCCAAATGACATGATCTTCAGTGCAATTGCCTCAA...CCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp CACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGAGGATTCTCAGGGAACATTaGGGCAATTGCACTGAAGAT +
Preference number: 4 (lower is better)
Translates to: HESQDSAATISAAVGPGRILREH*GNCTED
Trigger: ATCTTCAGTGCAATTGCCTCAATGTTCCCTGAGAAT...CCTCCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp TCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAATGTTTTGTGGGAGTCTaGCAGCGAGAGTTAGCCTCT +
Preference number: 4 (lower is better)
Translates to: SVWETQCRRLEQQWCEHECFVGV*QRELAS
Trigger: AGAGGCTAACTCTCGCTGTCAGACTCCCACAAAACA...TTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp CAGTGGTGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGTGTTTTGTGGGAGTCTaGCAGCGAGAGTTAGCCTCT +
Preference number: 4 (lower is better)
Translates to: QWCEHESQDSAATISAAVCFVGV*QRELAS
Trigger: AGAGGCTAACTCTCGCTGTCAGACTCCCACAAAACA...CACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACACCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp GGGGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGTCTTTGACTGCAAACTaGAAGACCTGCTTGCACGTC +
Preference number: 4 (lower is better)
Translates to: GVSQCGRHSAGDSSSSGVSLTAN*KTCLHV
Trigger: GACGTGCAAGCAGGTCTTTCAGTTTGCAGTCAAAGA...CACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp AGCACTGACTATGTGGTGCCTTCTCCGGCGACGACCAGAGCACTTGGAGCGGGGCAGCTTCAGGATAAGTaGTTCTTTGACTGCAAACTG +
Preference number: 4 (lower is better)
Translates to: STDYVVPSPATTRALGAGQLQDK*FFDCKL
Trigger: CAGTTTGCAGTCAAAGAATCACTTATCCTGAAGCTG...CCCCGCTCCAAGTGCTCTGGTCGTCGCCGGAGAAGGCACCACATAGTCAGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588239.5
ENST00000588897.5
CDS-3UTR TCA 90 bp TGGGTCAGGAGGAACCCCACTTCTTCCTTCATGGGACAACAAGTGGAGTGGGAACCAGGGAAACGATTCTaGCAGTCTGGGTTGCACTGG +
Preference number: 4 (lower is better)
Translates to: WVRRNPTSSFMGQQVEWEPGKRF*QSGLHW
Trigger: CCAGTGCAACCCAGACTGTCAGAATCGTTTCCCTGG...TTCCCACTCCACTTGTTGTCCCATGAAGGAAGAAGTGGGGTTCCTCCTGACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR TCA 90 bp TGGGTCAGGAGGAACCCCACTTCTTCCTTCATGGGACAACAAGTGGAGTGGGAACGATCAGCCTCATCCTaGGAGATGAGCTCACCACAG +
Preference number: 4 (lower is better)
Translates to: WVRRNPTSSFMGQQVEWERSASS*EMSSPQ
Trigger: CTGTGGTGAGCTCATCTCTCAGGATGAGGCTGATCG...TTCCCACTCCACTTGTTGTCCCATGAAGGAAGAAGTGGGGTTCCTCCTGACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR TCA 90 bp CAGTGGTGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGTGTCTCCCCTCTCATTaGGACAGTTTTGTGCCCTCT +
Preference number: 4 (lower is better)
Translates to: QWCEHESQDSAATISAAVCLPSH*DSFVPS
Trigger: AGAGGGCACAAAACTGTCTCAATGAGAGGGGAGACA...CACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACACCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000592743.5
CDS-3UTR TCA 90 bp TCTGTCTCCCCTCTCATTGAGACAGTTTTGTGCCCTCTGGACATGGCAGAGGCCTGTGCTCGCTTCTTCTaGGGCCAGAGAAACAGTCTC +
Preference number: 4 (lower is better)
Translates to: SVSPLIETVLCPLDMAEACARFF*GQRNSL
Trigger: GAGACTGTTTCTCTGGCCTCAGAAGAAGCGAGCACA...GGCCTCTGCCATGTCCAGAGGGCACAAAACTGTCTCAATGAGAGGGGAGACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR TCA 90 bp GGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGGGAGTATTCATGAACTaGAGCTGGGACAGGAGACTG +
Preference number: 4 (lower is better)
Translates to: GFSVWETQCRRLEQQWCEGVFMN*SWDRRL
Trigger: CAGTCTCCTGTCCCAGCTTCAGTTCATGAATACTCC...CTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR TCA 90 bp TTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGGAGTATTCATGAACTaGAGCTGGGACAGGAGACTG +
Preference number: 4 (lower is better)
Translates to: FSVWETQCRRLEQQWCEHGVFMN*SWDRRL
Trigger: CAGTCTCCTGTCCCAGCTTCAGTTCATGAATACTCC...GTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR TCA 90 bp CAGTGGTGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGACAGGCTTCATTGACTaGACAGGTTGGACACGAAGC +
Preference number: 4 (lower is better)
Translates to: QWCEHESQDSAATISAAVTGFID*TGWTRS
Trigger: GCTTCGTGTCCAACCTGTTCAGTCAATGAAGCCTGT...CACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACACCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp CAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAAACTCACAGGCTTCATTaGCTGAACAGGTTGGACACG +
Preference number: 4 (lower is better)
Translates to: QCGRHSAGDSSSSGVSTKTHRLH*LNRLDT
Trigger: CGTGTCCAACCTGTTCAGTCAATGAAGCCTGTGAGT...TTTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp TCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAACTCACAGGCTTCATTaGCTGAACAGGTTGGACACG +
Preference number: 4 (lower is better)
Translates to: SVWETQCRRLEQQWCEHETHRLH*LNRLDT
Trigger: CGTGTCCAACCTGTTCAGTCAATGAAGCCTGTGAGT...TTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp CAGTGGTGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGACTCACAGGCTTCATTaGCTGAACAGGTTGGACACG +
Preference number: 4 (lower is better)
Translates to: QWCEHESQDSAATISAAVTHRLH*LNRLDT
Trigger: CGTGTCCAACCTGTTCAGTCAATGAAGCCTGTGAGT...CACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACACCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp CACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGAGGCACATACAAAGCCTTTaGACCCATATTTGCCTGAAG +
Preference number: 4 (lower is better)
Translates to: HESQDSAATISAAVGPGRHIQSL*THICLK
Trigger: CTTCAGGCAAATATGGGTGCAAAGGCTTTGTATGTG...CCTCCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000592743.5
CDS-3UTR GCA 90 bp CAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAATCTGAGGTGTCATTGTaGCCTTCCTCCTCCTCATCT +
Preference number: 4 (lower is better)
Translates to: QCGRHSAGDSSSSGVSTKSEVSL*PSSSSS
Trigger: AGATGAGGAGGAGGAAGGGCACAATGACACCTCAGA...TTTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp GTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCTCTGAGGTGTCATTGTaGCCTTCCTCCTCCTCATCT +
Preference number: 4 (lower is better)
Translates to: VSQCGRHSAGDSSSSGVSSEVSL*PSSSSS
Trigger: AGATGAGGAGGAGGAAGGGCACAATGACACCTCAGA...GCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp CAGCGAGAGTTAGCCTCTGAAGAACTGGAGGCCCAGTCATTGCCTGTGTCCCTGTCTGAGGTGTCATTGTaGCCTTCCTCCTCCTCATCT +
Preference number: 4 (lower is better)
Translates to: QRELASEELEAQSLPVSLSEVSL*PSSSSS
Trigger: AGATGAGGAGGAGGAAGGGCACAATGACACCTCAGA...CAGGGACACAGGCAATGACTGGGCCTCCAGTTCTTCAGAGGCTAACTCTCGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586935.5
ENST00000588897.5
CDS-3UTR GCA 90 bp TTCTGTCAGGAGTTGCTGGGTGCGGGGTACGTGTGTGCCCTCCAGTGTGGTGAGTCTTTGCTGTCATCCTaGTTTCCATCTGAGGTGTCA +
Preference number: 4 (lower is better)
Translates to: FCQELLGAGYVCALQCGESLLSS*FPSEVS
Trigger: TGACACCTCAGATGGAAAGCAGGATGACAGCAAAGA...CTCACCACACTGGAGGGCACACACGTACCCCGCACCCAGCAACTCCTGACAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp CAGTCCATTCCACAGGCTCCGAGGGTGCTTCCACTACGCAGAGTTGAGGTGGGGCTGGCAGATCTTCTTTaGTGTCATCCTGCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: QSIPQAPRVLPLRRVEVGLADLL*CHPAFH
Trigger: ATGGAAAGCAGGATGACAGCAAAGAAGATCTGCCAG...CCCCACCTCAACTCTGCGTAGTGGAAGCACCCTCGGAGCCTGTGGAATGGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586935.5
ENST00000588897.5
CDS-3UTR GCA 90 bp TGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAAGCCAAACTGAAAGACCTGCTTaGACGTCTTGGTCCCCAGAA +
Preference number: 4 (lower is better)
Translates to: WETQCRRLEQQWCEHESQTERPA*TSWSPE
Trigger: TTCTGGGGACCAAGACGTGCAAGCAGGTCTTTCAGT...TTGGCTTTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp GGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGACTGAAAGACCTGCTTaGACGTCTTGGTCCCCAGAA +
Preference number: 4 (lower is better)
Translates to: GFSVWETQCRRLEQQWCETERPA*TSWSPE
Trigger: TTCTGGGGACCAAGACGTGCAAGCAGGTCTTTCAGT...CTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp TTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACACTGAAAGACCTGCTTaGACGTCTTGGTCCCCAGAA +
Preference number: 4 (lower is better)
Translates to: FSVWETQCRRLEQQWCEHTERPA*TSWSPE
Trigger: TTCTGGGGACCAAGACGTGCAAGCAGGTCTTTCAGT...GTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp GGGGGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTAATCTTCCTGCAGTGTaGAGCCCACAATCTGTGCTT +
Preference number: 4 (lower is better)
Translates to: GGFSVWETQCRRLEQQWCNLPAV*SPQSVL
Trigger: AAGCACAGATTGTGGGCTGCACACTGCAGGAAGATT...ACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp TGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTAATCTTCCTGCAGTGTaGAGCCCACAATCTGTGCTT +
Preference number: 4 (lower is better)
Translates to: CEHESQDSAATISAAVGPNLPAV*SPQSVL
Trigger: AAGCACAGATTGTGGGCTGCACACTGCAGGAAGATT...AGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp TGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGACATTGCTTGGTATTaGACTGGGTCTTACAGCGAC +
Preference number: 4 (lower is better)
Translates to: CEHESQDSAATISAAVGPDIAWY*TGSYSD
Trigger: GTCGCTGTAAGACCCAGTGCAATACCAAGCAATGTC...AGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp TCTGTCTCCCCTCTCATTGAGACAGTTTTGTGCCCTCTGGACATGGCAGAGGCCCGAAAGCCAAGACAGTaGCGCTACCATAAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: SVSPLIETVLCPLDMAEARKPRQ*RYHKCC
Trigger: GCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCG...GGCCTCTGCCATGTCCAGAGGGCACAAAACTGTCTCAATGAGAGGGGAGACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000592743.5
CDS-3UTR GCA 90 bp CATCGATGTTGGGTGTGCACTGAGGGGGAAGTGCATTGGGGTCTGACATCTCTGCGAAAGCCAAGACAGTaGCGCTACCATAAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: HRCWVCTEGEVHWGLTSLRKPRQ*RYHKCC
Trigger: GCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCG...CAGAGATGTCAGACCCCAATGCACTTCCCCCTCAGTGCACACCCAACATCGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588897.5
CDS-3UTR GCA 90 bp CTGTCTCCCCTCTCATTGAGACAGTTTTGTGCCCTCTGGACATGGCAGAGGCCTCGAAAGCCAAGACAGTaGCGCTACCATAAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: LSPLSLRQFCALWTWQRPRKPRQ*RYHKCC
Trigger: GCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCG...AGGCCTCTGCCATGTCCAGAGGGCACAAAACTGTCTCAATGAGAGGGGAGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000592743.5
CDS-3UTR GCA 90 bp TTTATTGGCAATGAAGCCGCATGTATACCAGGCTCCCCTAGTCCCCACCACCTTGTGTGGGAGACACAGTaGAGGAGACTCGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: FIGNEAACIPGSPSPHHLVWETQ*RRLEQQ
Trigger: CTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACAC...AAGGTGGTGGGGACTAGGGGAGCCTGGTATACATGCGGCTTCATTGCCAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp TCTGTCTCCCCTCTCATTGAGACAGTTTTGTGCCCTCTGGACATGGCAGAGGCCTTTCAGTTTGAGCCCTaGCACGAGGGAGGAGGTAGT +
Preference number: 4 (lower is better)
Translates to: SVSPLIETVLCPLDMAEAFQFEP*HEGGGS
Trigger: ACTACCTCCTCCCTCGTGGCAGGGCTCAAACTGAAA...GGCCTCTGCCATGTCCAGAGGGCACAAAACTGTCTCAATGAGAGGGGAGACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp TGGGTCAGGAGGAACCCCACTTCTTCCTTCATGGGACAACAAGTGGAGTGGGAATCTAGTCCAAGCCTGTaGCCACCTACCCTGAAGCGA +
Preference number: 4 (lower is better)
Translates to: WVRRNPTSSFMGQQVEWESSPSL*PPTLKR
Trigger: TCGCTTCAGGGTAGGTGGGCACAGGCTTGGACTAGA...TTCCCACTCCACTTGTTGTCCCATGAAGGAAGAAGTGGGGTTCCTCCTGACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp TCTGTCTCCCCTCTCATTGAGACAGTTTTGTGCCCTCTGGACATGGCAGAGGCCGCCAGCCTAAACGCGTaGAATTTAGCCCCTCACCAA +
Preference number: 4 (lower is better)
Translates to: SVSPLIETVLCPLDMAEAASLNA*NLAPHQ
Trigger: TTGGTGAGGGGCTAAATTGCACGCGTTTAGGCTGGC...GGCCTCTGCCATGTCCAGAGGGCACAAAACTGTCTCAATGAGAGGGGAGACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp ACAAACCACGGCGGATGCAGATTTCAGGATCATGCTGGGGCCTGGCCCATTTGGGACAGGTGGTCTACCTaGTTCTTCTCCCACTTCAGA +
Preference number: 4 (lower is better)
Translates to: TNHGGCRFQDHAGAWPIWDRWST*FFSHFR
Trigger: TCTGAAGTGGGAGAAGAAGCAGGTAGACCACCTGTC...CCAAATGGGCCAGGCCCCAGCATGATCCTGAAATCTGCATCCGCCGTGGTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp TCTGTCTCCCCTCTCATTGAGACAGTTTTGTGCCCTCTGGACATGGCAGAGGCCACACAGGGCAGCTCTTaGTGGCCCCATTCACATGAA +
Preference number: 4 (lower is better)
Translates to: SVSPLIETVLCPLDMAEATQGSS*WPHSHE
Trigger: TTCATGTGAATGGGGCCAGCAAGAGCTGCCCTGTGT...GGCCTCTGCCATGTCCAGAGGGCACAAAACTGTCTCAATGAGAGGGGAGACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp ACAAACCACGGCGGATGCAGATTTCAGGATCATGCTGGGGCCTGGCCCATTTGGGCATGTGAGTGTGTGTaGATGTCCCATACCAAACCG +
Preference number: 4 (lower is better)
Translates to: TNHGGCRFQDHAGAWPIWACECV*MSHTKP
Trigger: CGGTTTGGTATGGGACATGCACACACACTCACATGC...CCAAATGGGCCAGGCCCCAGCATGATCCTGAAATCTGCATCCGCCGTGGTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp TTGAGACCCATCTTTAAAAGTGGGGGACAGCAGGGACAAAGGATGGGAAACTGGTCAGGAGTTGCTGGGTaGGGGGTACGTGTGTGCCCT +
Preference number: 4 (lower is better)
Translates to: LRPIFKSGGQQGQRMGNWSGVAG*GVRVCP
Trigger: AGGGCACACACGTACCCCGCACCCAGCAACTCCTGA...CCAGTTTCCCATCCTTTGTCCCTGCTGTCCCCCACTTTTAAAGATGGGTCTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp CTCCCTACTGTAACACTCCCAGGCCAATCTATACCCGCCCACACCCTTTCTACTCTTTCTGTCAGGAGTTaGTGGGTGCGGGGTACGTGT +
Preference number: 4 (lower is better)
Translates to: LPTVTLPGQSIPAHTLSTLSVRS*WVRGTC
Trigger: ACACGTACCCCGCACCCAGCAACTCCTGACAGAAAG...AGTAGAAAGGGTGTGGGCGGGTATAGATTGGCCTGGGAGTGTTACAGTAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp GCCTCTATGGGGAATGGAAGGCCTGAAAACACCCACAAATCCAGCGAGCCAGGACAGATTTCAGGATCATaGTGGGGCCTGGCCCATTTG +
Preference number: 4 (lower is better)
Translates to: ASMGNGRPENTHKSSEPGQISGS*WGLAHL
Trigger: CAAATGGGCCAGGCCCCAGCATGATCCTGAAATCTG...TCCTGGCTCGCTGGATTTGTGGGTGTTTTCAGGCCTTCCATTCCCCATAGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp GAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGCAAAGCCTTATAGAATaGAAGGGGAAGTGTTGGGTT +
Preference number: 4 (lower is better)
Translates to: EHESQDSAATISAAVGPGQSLIE*KGKCWV
Trigger: AACCCAACACTTCCCCTTGCATTCTATAAGGCTTTG...CCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590078.5
CDS-3UTR CCA 90 bp TGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTCTCCTTCATGTCATCTaGGACACCATTCTCAGGGAA +
Preference number: 4 (lower is better)
Translates to: CEHESQDSAATISAAVGPLLHVI*DTILRE
Trigger: TTCCCTGAGAATGGTGTCCCAGATGACATGAAGGAG...AGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp TTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAGGGGGAAGTGCATTaGGGTCTGACATCTCTGTTA +
Preference number: 4 (lower is better)
Translates to: FSVWETQCRRLEQQWCEHEGEVH*GLTSLL
Trigger: TAACAGAGATGTCAGACCCCAATGCACTTCCCCCTC...GTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp CAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAAGAGGGGGAAGTGCATTaGGGTCTGACATCTCTGTTA +
Preference number: 4 (lower is better)
Translates to: QCGRHSAGDSSSSGVSTKEGEVH*GLTSLL
Trigger: TAACAGAGATGTCAGACCCCAATGCACTTCCCCCTC...TTTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp TGCACTGAGGGGGAAGTGCATTGGGGTCTGACATCTCTGTTAGTTCTCGATACCTGGGGCCATCGATGTTaGGTGTGCACTGAGGGGGAA +
Preference number: 4 (lower is better)
Translates to: CTEGEVHWGLTSLLVLDTWGHRC*VCTEGE
Trigger: TTCCCCCTCAGTGCACACCCAACATCGATGGCCCCA...GGTATCGAGAACTAACAGAGATGTCAGACCCCAATGCACTTCCCCCTCAGTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
CDS-3UTR CCA 90 bp ACCTGCTTGCACGTCTTGGTCCCCAGAAGCCTGGCTATTGAACAGAAGTTGTTGCCCGCTGCACAGACTTaGCATTGGGGCCATCGATGT +
Preference number: 4 (lower is better)
Translates to: TCLHVLVPRSLAIEQKLLPAAQT*HWGHRC
Trigger: ACATCGATGGCCCCAATGCCAAGTCTGTGCAGCGGG...CAACAACTTCTGTTCAATAGCCAGGCTTCTGGGGACCAAGACGTGCAAGCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588897.5
CDS-3UTR CCA 90 bp CCTCTGAAGAACTGGAGGCCCAGTCATTGCCTGTGTCCCTGTCACTGTCTCCTTTTGGAGCGGGGGTTGTaGAGCATGGCATACTCCTTT +
Preference number: 4 (lower is better)
Translates to: PLKNWRPSHCLCPCHCLLLERGL*SMAYSF
Trigger: AAAGGAGTATGCCATGCTCCACAACCCCCGCTCCAA...AAGGAGACAGTGACAGGGACACAGGCAATGACTGGGCCTCCAGTTCTTCAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586935.5
ENST00000588239.5
ENST00000588897.5
CDS-3UTR CCA 90 bp CAGTGGTGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGAGTTGAGGTGGGGCTaGACTAGCCTTCTGTTTTGT +
Preference number: 4 (lower is better)
Translates to: QWCEHESQDSAATISAAVELRWG*TSLLFC
Trigger: ACAAAACAGAAGGCTAGTCCAGCCCCACCTCAACTC...CACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACACCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp CATAATGCTTGCCTGCAGCTGCTAAGCCAGAACTTTGGAGGAGCTGGAGCACTGTACGCAGAGTTGAGGTaGGGCTGGACTAGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: HNACLQLLSQNFGGAGALYAELR*GWTSLL
Trigger: CAGAAGGCTAGTCCAGCCCCACCTCAACTCTGCGTA...CAGTGCTCCAGCTCCTCCAAAGTTCTGGCTTAGCAGCTGCAGGCAAGCATTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp TCTGAAGAACTGGAGGCCCAGTCATTGCCTGTGTCCCTGTCACTGTCTCCTTCTTACGCAGAGTTGAGGTaGGGCTGGACTAGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: SEELEAQSLPVSLSLSPSYAELR*GWTSLL
Trigger: CAGAAGGCTAGTCCAGCCCCACCTCAACTCTGCGTA...AGAAGGAGACAGTGACAGGGACACAGGCAATGACTGGGCCTCCAGTTCTTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586935.5
ENST00000588239.5
ENST00000588897.5
CDS-3UTR CCA 90 bp GGGGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGCAGTCTGGGTTGCACTaGCAGAACTTCTCACAGAAA +
Preference number: 4 (lower is better)
Translates to: GVSQCGRHSAGDSSSSGVQSGLH*QNFSQK
Trigger: TTTCTGTGAGAAGTTCTGCCAGTGCAACCCAGACTG...CACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp ACAAACCACGGCGGATGCAGATTTCAGGATCATGCTGGGGCCTGGCCCATTTGGTGCTTGGTATTGCACTaGGTCTTACAGCGACAGCCA +
Preference number: 4 (lower is better)
Translates to: TNHGGCRFQDHAGAWPIWCLVLH*VLQRQP
Trigger: TGGCTGTCGCTGTAAGACCCAGTGCAATACCAAGCA...CCAAATGGGCCAGGCCCCAGCATGATCCTGAAATCTGCATCCGCCGTGGTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp CCTGGGACAGGTGGTCTACCTGCTTCTTCTCCCACTTCAGATACCCTCTGCCAGTGCTTGGTATTGCACTaGGTCTTACAGCGACAGCCA +
Preference number: 4 (lower is better)
Translates to: PGTGGLPASSPTSDTLCQCLVLH*VLQRQP
Trigger: TGGCTGTCGCTGTAAGACCCAGTGCAATACCAAGCA...CTGGCAGAGGGTATCTGAAGTGGGAGAAGAAGCAGGTAGACCACCTGTCCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp GGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGTGCTTGGTATTGCACTaGGTCTTACAGCGACAGCCA +
Preference number: 4 (lower is better)
Translates to: GFSVWETQCRRLEQQWCECLVLH*VLQRQP
Trigger: TGGCTGTCGCTGTAAGACCCAGTGCAATACCAAGCA...CTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp CACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGAGGTTCTTAAGTCCACGCTaGATGCTGCAGTTTTTACAG +
Preference number: 4 (lower is better)
Translates to: HESQDSAATISAAVGPGRFLSPR*MLQFLQ
Trigger: CTGTAAAAACTGCAGCATCCAGCGTGGACTTAAGAA...CCTCCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp TGGGTCAGGAGGAACCCCACTTCTTCCTTCATGGGACAACAAGTGGAGTGGGAAGGGGGTTTCTCAGTGTaGGAGACACAGTGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: WVRRNPTSSFMGQQVEWEGGFSV*ETQCRR
Trigger: TCTCCTGCACTGTGTCTCCCACACTGAGAAACCCCC...TTCCCACTCCACTTGTTGTCCCATGAAGGAAGAAGTGGGGTTCCTCCTGACCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp TTGAGACCCATCTTTAAAAGTGGGGGACAGCAGGGACAAAGGATGGGAAACTGGCCTGAGGCCACAGCCTaGGGAGCCGACACGAAATCA +
Preference number: 4 (lower is better)
Translates to: LRPIFKSGGQQGQRMGNWPEATA*GADTKS
Trigger: TGATTTCGTGTCGGCTCCCCAGGCTGTGGCCTCAGG...CCAGTTTCCCATCCTTTGTCCCTGCTGTCCCCCACTTTTAAAGATGGGTCTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp CTGTCTCCCCTCTCATTGAGACAGTTTTGTGCCCTCTGGACATGGCAGAGGCCTAGCGATAAGCAACACTaGCCATTGGGCCTTGCCTCT +
Preference number: 4 (lower is better)
Translates to: LSPLSLRQFCALWTWQRPSDKQH*PLGLAS
Trigger: AGAGGCAAGGCCCAATGGCCAGTGTTGCTTATCGCT...AGGCCTCTGCCATGTCCAGAGGGCACAAAACTGTCTCAATGAGAGGGGAGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp GTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCCAGGGCAGCTCTTGCTaGCCCCATTCACATGAAATT +
Preference number: 4 (lower is better)
Translates to: VSQCGRHSAGDSSSSGVSQGSSC*PHSHEI
Trigger: AATTTCATGTGAATGGGGCCAGCAAGAGCTGCCCTG...GCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp CTCCCTACTGTAACACTCCCAGGCCAATCTATACCCGCCCACACCCTTTCTACTTCCATCATGACGTGGTaGGGAGGGGTTGAGACCCAT +
Preference number: 4 (lower is better)
Translates to: LPTVTLPGQSIPAHTLSTSIMTW*GGVETH
Trigger: ATGGGTCTCAACCCCTCCCCACCACGTCATGATGGA...AGTAGAAAGGGTGTGGGCGGGTATAGATTGGCCTGGGAGTGTTACAGTAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp TTTATTGGCAATGAAGCCGCATGTATACCAGGCTCCCCTAGTCCCCACCACCTTCCATCCATCATGACGTaGTGGGGAGGGGTTGAGACC +
Preference number: 4 (lower is better)
Translates to: FIGNEAACIPGSPSPHHLPSIMT*WGGVET
Trigger: GGTCTCAACCCCTCCCCACCACGTCATGATGGATGG...AAGGTGGTGGGGACTAGGGGAGCCTGGTATACATGCGGCTTCATTGCCAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR CAA 72 bp TACCCTGAAGCGATAAGCAACACTGGCCATTGGGCCTaGCCTCTATGGGGAATGGAAGGCCTGAAAACACCC +
Preference number: 4 (lower is better)
Translates to: YPEAISNTGHWA*PLWGMEGLKTP
Trigger: GGGTGTTTTCAGGCCTTCCATTCCCCATAGAGGCAAGGCCCAATGGCCAGTGTTGCTTATCGCTTCAGGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR TCA 90 bp TGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAAGCCAAGCACCCATATTTGCCTaGAGCCGTTTAAGTTGTCGA +
Preference number: 4 (lower is better)
Translates to: WETQCRRLEQQWCEHESQAPIFA*SRLSCR
Trigger: TCGACAACTTAAACGGCTTCAGGCAAATATGGGTGC...TTGGCTTTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000592743.5
CDS-3UTR TCA 90 bp GAGAAGCCTGCTCCCTACTGTAACACTCCCAGGCCAATCTATACCCGCCCACACGCACCCATATTTGCCTaGAGCCGTTTAAGTTGTCGA +
Preference number: 4 (lower is better)
Translates to: EKPAPYCNTPRPIYTRPHAPIFA*SRLSCR
Trigger: TCGACAACTTAAACGGCTTCAGGCAAATATGGGTGC...GTGTGGGCGGGTATAGATTGGCCTGGGAGTGTTACAGTAGGGAGCAGGCTTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR TCA 90 bp AGGCTCCGAGGGTGCTTCCACTACGCAGAGTTGAGGTGGGGCTGGACTAGCCTTATTCTCAGGGAACATTaGGGCAATTGCACTGAAGAT +
Preference number: 4 (lower is better)
Translates to: RLRGCFHYAELRWGWTSLILREH*GNCTED
Trigger: ATCTTCAGTGCAATTGCCTCAATGTTCCCTGAGAAT...AAGGCTAGTCCAGCCCCACCTCAACTCTGCGTAGTGGAAGCACCCTCGGAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588239.5
ENST00000588897.5
CDS-3UTR TCA 90 bp TCTGTCTCCCCTCTCATTGAGACAGTTTTGTGCCCTCTGGACATGGCAGAGGCCTGTTTTGTGGGAGTCTaGCAGCGAGAGTTAGCCTCT +
Preference number: 4 (lower is better)
Translates to: SVSPLIETVLCPLDMAEACFVGV*QRELAS
Trigger: AGAGGCTAACTCTCGCTGTCAGACTCCCACAAAACA...GGCCTCTGCCATGTCCAGAGGGCACAAAACTGTCTCAATGAGAGGGGAGACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000592743.5
CDS-3UTR TCA 90 bp CCCCAGTCCATTCCACAGGCTCCGAGGGTGCTTCCACTACGCAGAGTTGAGGTGTTGAACAGAAGTTGTTaGAGTAGGTGCCATGGAAGA +
Preference number: 4 (lower is better)
Translates to: PQSIPQAPRVLPLRRVEVLNRSC*SRCHGR
Trigger: TCTTCCATGGCACCTACTTCAACAACTTCTGTTCAA...CACCTCAACTCTGCGTAGTGGAAGCACCCTCGGAGCCTGTGGAATGGACTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588239.5
ENST00000588897.5
CDS-3UTR TCA 90 bp GGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGTCTTTGACTGCAAACTaGAAGACCTGCTTGCACGTC +
Preference number: 4 (lower is better)
Translates to: GFSVWETQCRRLEQQWCESLTAN*KTCLHV
Trigger: GACGTGCAAGCAGGTCTTTCAGTTTGCAGTCAAAGA...CTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp CAGTGGTGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGTCTTTGACTGCAAACTaGAAGACCTGCTTGCACGTC +
Preference number: 4 (lower is better)
Translates to: QWCEHESQDSAATISAAVSLTAN*KTCLHV
Trigger: GACGTGCAAGCAGGTCTTTCAGTTTGCAGTCAAAGA...CACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACACCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp GCCTGGGACAGGTGGTCTACCTGCTTCTTCTCCCACTTCAGATACCCTCTGCCATTCTCACAGAAATTCTaGGTCATGATGCAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: AWDRWSTCFFSHFRYPLPFSQKF*VMMQGQ
Trigger: CTGCCCCTGCATCATGACTCAGAATTTCTGTGAGAA...TGGCAGAGGGTATCTGAAGTGGGAGAAGAAGCAGGTAGACCACCTGTCCCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR TCA 90 bp CAGTGGTGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGTTCTCACAGAAATTCTaGGTCATGATGCAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: QWCEHESQDSAATISAAVFSQKF*VMMQGQ
Trigger: CTGCCCCTGCATCATGACTCAGAATTTCTGTGAGAA...CACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACACCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp CATAATGCTTGCCTGCAGCTGCTAAGCCAGAACTTTGGAGGAGCTGGAGCACTGAGTGATTCTGCTCACTaGAGGAAGGGTGGGGTCAGT +
Preference number: 4 (lower is better)
Translates to: HNACLQLLSQNFGGAGALSDSAH*RKGGVS
Trigger: ACTGACCCCACCCTTCCTTCAGTGAGCAGAATCACT...CAGTGCTCCAGCTCCTCCAAAGTTCTGGCTTAGCAGCTGCAGGCAAGCATTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR TCA 90 bp TTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAACAGGAGTATTCATaGACTGAAGCTGGGACAGGA +
Preference number: 4 (lower is better)
Translates to: FSVWETQCRRLEQQWCEHEQEYS*TEAGTG
Trigger: TCCTGTCCCAGCTTCAGTTCATGAATACTCCTGTTC...GTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR TCA 90 bp CTGTCTCCCCTCTCATTGAGACAGTTTTGTGCCCTCTGGACATGGCAGAGGCCTACAGGCTTCATTGACTaGACAGGTTGGACACGAAGC +
Preference number: 4 (lower is better)
Translates to: LSPLSLRQFCALWTWQRPTGFID*TGWTRS
Trigger: GCTTCGTGTCCAACCTGTTCAGTCAATGAAGCCTGT...AGGCCTCTGCCATGTCCAGAGGGCACAAAACTGTCTCAATGAGAGGGGAGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000428826.7
ENST00000592743.5
CDS-3UTR GCA 90 bp CACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGAGGCCATGTAGGGAATATTaGACAAAACCGTCTCATCTT +
Preference number: 4 (lower is better)
Translates to: HESQDSAATISAAVGPGRPCREY*TKPSHL
Trigger: AAGATGAGACGGTTTTGTGCAATATTCCCTACATGG...CCTCCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp GGGGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGCTGGCAGATCTTCTTTaGTGTCATCCTGCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: GVSQCGRHSAGDSSSSGVLADLL*CHPAFH
Trigger: ATGGAAAGCAGGATGACAGCAAAGAAGATCTGCCAG...CACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp TTTATTGGCAATGAAGCCGCATGTATACCAGGCTCCCCTAGTCCCCACCACCTTAGTGTGTGGAAGGAGTaGAGAGATTGCTCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: FIGNEAACIPGSPSPHHLSVWKE*RDCSRC
Trigger: GCAGCGGGAGCAATCTCTGCACTCCTTCCACACACT...AAGGTGGTGGGGACTAGGGGAGCCTGGTATACATGCGGCTTCATTGCCAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp TGCACTGAGGGGGAAGTGCATTGGGGTCTGACATCTCTGTTAGTTCTCGATACCAGTGTGTGGAAGGAGTaGAGAGATTGCTCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: CTEGEVHWGLTSLLVLDTSVWKE*RDCSRC
Trigger: GCAGCGGGAGCAATCTCTGCACTCCTTCCACACACT...GGTATCGAGAACTAACAGAGATGTCAGACCCCAATGCACTTCCCCCTCAGTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
CDS-3UTR GCA 90 bp CAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAAAATCTTCCTGCAGTGTaGAGCCCACAATCTGTGCTT +
Preference number: 4 (lower is better)
Translates to: QCGRHSAGDSSSSGVSTKNLPAV*SPQSVL
Trigger: AAGCACAGATTGTGGGCTGCACACTGCAGGAAGATT...TTTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp AGGGGCGGTCTGGGTGGTCGCAGGGTTGGTAGTTGTACACTTGTGTGGAAGAGTAATCTTCCTGCAGTGTaGAGCCCACAATCTGTGCTT +
Preference number: 4 (lower is better)
Translates to: RGGLGGRRVGSCTLVWKSNLPAV*SPQSVL
Trigger: AAGCACAGATTGTGGGCTGCACACTGCAGGAAGATT...ACTCTTCCACACAAGTGTACAACTACCAACCCTGCGACCACCCAGACCGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588239.5
ENST00000588897.5
CDS-3UTR GCA 90 bp TCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAAATCTTCCTGCAGTGTaGAGCCCACAATCTGTGCTT +
Preference number: 4 (lower is better)
Translates to: SVWETQCRRLEQQWCEHENLPAV*SPQSVL
Trigger: AAGCACAGATTGTGGGCTGCACACTGCAGGAAGATT...TTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp TTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGACATTGCTTGGTATTaGACTGGGTCTTACAGCGAC +
Preference number: 4 (lower is better)
Translates to: FSVWETQCRRLEQQWCEHDIAWY*TGSYSD
Trigger: GTCGCTGTAAGACCCAGTGCAATACCAAGCAATGTC...GTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp GGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGGTCACATTCTCGCACTaGCAGATAGCAAGGACATTG +
Preference number: 4 (lower is better)
Translates to: GFSVWETQCRRLEQQWCEVTFSH*QIARTL
Trigger: CAATGTCCTTGCTATCTGGCAGTGCGAGAATGTGAC...CTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp AGTGCAGAGATTGCTCCCGCTGCACAGACTTGGCATTGGGGCCATCGATGTTGGGTCACATTCTCGCACTaGCAGATAGCAAGGACATTG +
Preference number: 4 (lower is better)
Translates to: SAEIAPAAQTWHWGHRCWVTFSH*QIARTL
Trigger: CAATGTCCTTGCTATCTGGCAGTGCGAGAATGTGAC...CCAACATCGATGGCCCCAATGCCAAGTCTGTGCAGCGGGAGCAATCTCTGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588897.5
CDS-3UTR GCA 90 bp CAGTGGTGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGTCACATTCTCGCACTaGCAGATAGCAAGGACATTG +
Preference number: 4 (lower is better)
Translates to: QWCEHESQDSAATISAAVVTFSH*QIARTL
Trigger: CAATGTCCTTGCTATCTGGCAGTGCGAGAATGTGAC...CACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACACCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp TTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGTCCACGCTGGATGCTaGAGTTTTTACAGGAAACCA +
Preference number: 4 (lower is better)
Translates to: FSVWETQCRRLEQQWCEHVHAGC*SFYRKP
Trigger: TGGTTTCCTGTAAAAACTGCAGCATCCAGCGTGGAC...GTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp GTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCGTCCACGCTGGATGCTaGAGTTTTTACAGGAAACCA +
Preference number: 4 (lower is better)
Translates to: VSQCGRHSAGDSSSSGVSVHAGC*SFYRKP
Trigger: TGGTTTCCTGTAAAAACTGCAGCATCCAGCGTGGAC...GCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp TTCTGTGAGGGGTTCATGAGCTCATCTGTTGGCAGCTTCAGGATAAGTGATTCTTGCCGCTACCATAAGTaGTGCCGTGGGGCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: FCEGFMSSSVGSFRISDSCRYHK*CRGAWE
Trigger: CTCCCAGGCCCCACGGCAGCACTTATGGTAGCGGCA...AGAATCACTTATCCTGAAGCTGCCAACAGATGAGCTCATGAACCCCTCACAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588897.5
CDS-3UTR GCA 90 bp TGGGTCAGGAGGAACCCCACTTCTTCCTTCATGGGACAACAAGTGGAGTGGGAACGAAAGCCAAGACAGTaGCGCTACCATAAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: WVRRNPTSSFMGQQVEWERKPRQ*RYHKCC
Trigger: GCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCG...TTCCCACTCCACTTGTTGTCCCATGAAGGAAGAAGTGGGGTTCCTCCTGACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp TCACGCATAAGTCATCCACCCCAGCCTGTGCTCGCTTCTTCTGAGGCCAGAGAATCCCCCAGCCTTGAATaGCTGTACTTAGAACCCACA +
Preference number: 4 (lower is better)
Translates to: SRISHPPQPVLASSEARESPSLE*LYLEPT
Trigger: TGTGGGTTCTAAGTACAGGCATTCAAGGCTGGGGGA...TTCTCTGGCCTCAGAAGAAGCGAGCACAGGCTGGGGTGGATGACTTATGCGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp TGGGTCAGGAGGAACCCCACTTCTTCCTTCATGGGACAACAAGTGGAGTGGGAAACACAGGGCAGCTCTTaGTGGCCCCATTCACATGAA +
Preference number: 4 (lower is better)
Translates to: WVRRNPTSSFMGQQVEWETQGSS*WPHSHE
Trigger: TTCATGTGAATGGGGCCAGCAAGAGCTGCCCTGTGT...TTCCCACTCCACTTGTTGTCCCATGAAGGAAGAAGTGGGGTTCCTCCTGACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp CAGTGGTGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGACAAACCACGGCGGATaGAGATTTCAGGATCATGCT +
Preference number: 4 (lower is better)
Translates to: QWCEHESQDSAATISAAVTNHGG*RFQDHA
Trigger: AGCATGATCCTGAAATCTGCATCCGCCGTGGTTTGT...CACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACACCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp GAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGCAAATCCCGGGAAAATaGTCTCTATGGTACACTTTT +
Preference number: 4 (lower is better)
Translates to: EHESQDSAATISAAVGPGQIPGK*SLWYTF
Trigger: AAAAGTGTACCATAGAGAGCATTTTCCCGGGATTTG...CCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000428826.7
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp CACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGAGGCAAATCCCGGGAAAATaGTCTCTATGGTACACTTTT +
Preference number: 4 (lower is better)
Translates to: HESQDSAATISAAVGPGRQIPGK*SLWYTF
Trigger: AAAAGTGTACCATAGAGAGCATTTTCCCGGGATTTG...CCTCCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000428826.7
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp TGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAAGCCAACTCCTTCATGTCATCTaGGACACCATTCTCAGGGAA +
Preference number: 4 (lower is better)
Translates to: WETQCRRLEQQWCEHESQLLHVI*DTILRE
Trigger: TTCCCTGAGAATGGTGTCCCAGATGACATGAAGGAG...TTGGCTTTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp TCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAACTCCTTCATGTCATCTaGGACACCATTCTCAGGGAA +
Preference number: 4 (lower is better)
Translates to: SVWETQCRRLEQQWCEHELLHVI*DTILRE
Trigger: TTCCCTGAGAATGGTGTCCCAGATGACATGAAGGAG...TTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp TCTGTCTCCCCTCTCATTGAGACAGTTTTGTGCCCTCTGGACATGGCAGAGGCCGAGGGGGAAGTGCATTaGGGTCTGACATCTCTGTTA +
Preference number: 4 (lower is better)
Translates to: SVSPLIETVLCPLDMAEAEGEVH*GLTSLL
Trigger: TAACAGAGATGTCAGACCCCAATGCACTTCCCCCTC...GGCCTCTGCCATGTCCAGAGGGCACAAAACTGTCTCAATGAGAGGGGAGACAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000592743.5
CDS-3UTR CCA 90 bp CCTACTGTAACACTCCCAGGCCAATCTATACCCGCCCACACCCTTTCTACTCAAGCACAGACTTGGCATTaGGGCCATCGATGTTGGGTG +
Preference number: 4 (lower is better)
Translates to: PTVTLPGQSIPAHTLSTQAQTWH*GHRCWV
Trigger: CACCCAACATCGATGGCCCCAATGCCAAGTCTGTGC...TTGAGTAGAAAGGGTGTGGGCGGGTATAGATTGGCCTGGGAGTGTTACAGTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp GGGGGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGCAGTCTGTGCCACATaGTTCTGGTTCAATCTTGAT +
Preference number: 4 (lower is better)
Translates to: GGFSVWETQCRRLEQQWCAVCAT*FWFNLD
Trigger: ATCAAGATTGAACCAGAACCATGTGGCACAGACTGC...ACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp CCTACTGTAACACTCCCAGGCCAATCTATACCCGCCCACACCCTTTCTACTCAAGAAGCACTGACTATGTaGTGCCTTCTCCGGCGACGA +
Preference number: 4 (lower is better)
Translates to: PTVTLPGQSIPAHTLSTQEALTM*CLLRRR
Trigger: TCGTCGCCGGAGAAGGCACCACATAGTCAGTGCTTC...TTGAGTAGAAAGGGTGTGGGCGGGTATAGATTGGCCTGGGAGTGTTACAGTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp TCTGTCTCCCCTCTCATTGAGACAGTTTTGTGCCCTCTGGACATGGCAGAGGCCGAGTTGAGGTGGGGCTaGACTAGCCTTCTGTTTTGT +
Preference number: 4 (lower is better)
Translates to: SVSPLIETVLCPLDMAEAELRWG*TSLLFC
Trigger: ACAAAACAGAAGGCTAGTCCAGCCCCACCTCAACTC...GGCCTCTGCCATGTCCAGAGGGCACAAAACTGTCTCAATGAGAGGGGAGACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000592743.5
CDS-3UTR CCA 90 bp GGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGTGGTCCCCAGAAGCCTaGCTATTGAACAGAAGTTGT +
Preference number: 4 (lower is better)
Translates to: GFSVWETQCRRLEQQWCEWSPEA*LLNRSC
Trigger: ACAACTTCTGTTCAATAGCCAGGCTTCTGGGGACCA...CTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp CAGTGGTGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGTGGTCCCCAGAAGCCTaGCTATTGAACAGAAGTTGT +
Preference number: 4 (lower is better)
Translates to: QWCEHESQDSAATISAAVWSPEA*LLNRSC
Trigger: ACAACTTCTGTTCAATAGCCAGGCTTCTGGGGACCA...CACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACACCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp CAGAGCACTTGGAGCGGGGGTTGTGGAGCATGGCATACTCCTTTGCTCCTTCCATGGTCCCCAGAAGCCTaGCTATTGAACAGAAGTTGT +
Preference number: 4 (lower is better)
Translates to: QSTWSGGCGAWHTPLLLPWSPEA*LLNRSC
Trigger: ACAACTTCTGTTCAATAGCCAGGCTTCTGGGGACCA...TGGAAGGAGCAAAGGAGTATGCCATGCTCCACAACCCCCGCTCCAAGTGCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588239.5
ENST00000588897.5
CDS-3UTR CCA 90 bp TTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACTGGTCCCCAGAAGCCTaGCTATTGAACAGAAGTTGT +
Preference number: 4 (lower is better)
Translates to: FSVWETQCRRLEQQWCEHWSPEA*LLNRSC
Trigger: ACAACTTCTGTTCAATAGCCAGGCTTCTGGGGACCA...GTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp TTGAGACCCATCTTTAAAAGTGGGGGACAGCAGGGACAAAGGATGGGAAACTGGCCTGCTTGCACGTCTTaGTCCCCAGAAGCCTGGCTA +
Preference number: 4 (lower is better)
Translates to: LRPIFKSGGQQGQRMGNWPACTS*SPEAWL
Trigger: TAGCCAGGCTTCTGGGGACCAAGACGTGCAAGCAGG...CCAGTTTCCCATCCTTTGTCCCTGCTGTCCCCCACTTTTAAAGATGGGTCTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp TCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAACAGTCTGGGTTGCACTaGCAGAACTTCTCACAGAAA +
Preference number: 4 (lower is better)
Translates to: SVWETQCRRLEQQWCEHEQSGLH*QNFSQK
Trigger: TTTCTGTGAGAAGTTCTGCCAGTGCAACCCAGACTG...TTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp GTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCCAGTCTGGGTTGCACTaGCAGAACTTCTCACAGAAA +
Preference number: 4 (lower is better)
Translates to: VSQCGRHSAGDSSSSGVSQSGLH*QNFSQK
Trigger: TTTCTGTGAGAAGTTCTGCCAGTGCAACCCAGACTG...GCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp CAGTGGTGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGACGATTCTGACAGTCTaGGTTGCACTGGCAGAACTT +
Preference number: 4 (lower is better)
Translates to: QWCEHESQDSAATISAAVTILTV*VALAEL
Trigger: AAGTTCTGCCAGTGCAACCCAGACTGTCAGAATCGT...CACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACACCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp CAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAAACGATTCTGACAGTCTaGGTTGCACTGGCAGAACTT +
Preference number: 4 (lower is better)
Translates to: QCGRHSAGDSSSSGVSTKTILTV*VALAEL
Trigger: AAGTTCTGCCAGTGCAACCCAGACTGTCAGAATCGT...TTTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp GGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGACGATTCTGACAGTCTaGGTTGCACTGGCAGAACTT +
Preference number: 4 (lower is better)
Translates to: GFSVWETQCRRLEQQWCETILTV*VALAEL
Trigger: AAGTTCTGCCAGTGCAACCCAGACTGTCAGAATCGT...CTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp TCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAACGATTCTGACAGTCTaGGTTGCACTGGCAGAACTT +
Preference number: 4 (lower is better)
Translates to: SVWETQCRRLEQQWCEHETILTV*VALAEL
Trigger: AAGTTCTGCCAGTGCAACCCAGACTGTCAGAATCGT...TTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp TGGAGCGGGGGTTGTGGAGCATGGCATACTCCTTTGCTCCTTCCAGCAAAAGGATGCTTGGTATTGCACTaGGTCTTACAGCGACAGCCA +
Preference number: 4 (lower is better)
Translates to: WSGGCGAWHTPLLLPAKGCLVLH*VLQRQP
Trigger: TGGCTGTCGCTGTAAGACCCAGTGCAATACCAAGCA...TCCTTTTGCTGGAAGGAGCAAAGGAGTATGCCATGCTCCACAACCCCCGCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588897.5
CDS-3UTR CCA 90 bp GGCGACGACCAGAGCACTTGGAGCGGGGGTTGTGGAGCATGGCATACTCCTTTGTTCTTAAGTCCACGCTaGATGCTGCAGTTTTTACAG +
Preference number: 4 (lower is better)
Translates to: GDDQSTWSGGCGAWHTPLFLSPR*MLQFLQ
Trigger: CTGTAAAAACTGCAGCATCCAGCGTGGACTTAAGAA...CAAAGGAGTATGCCATGCTCCACAACCCCCGCTCCAAGTGCTCTGGTCGTCGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000588897.5
CDS-3UTR CCA 90 bp TCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAAAGATCCCAATCCGATaGTCTCCATTCACCATGACC +
Preference number: 4 (lower is better)
Translates to: SVWETQCRRLEQQWCEHEKIPIR*SPFTMT
Trigger: GGTCATGGTGAATGGAGACCATCGGATTGGGATCTT...TTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp CAGTGGTGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGAAGATCCCAATCCGATaGTCTCCATTCACCATGACC +
Preference number: 4 (lower is better)
Translates to: QWCEHESQDSAATISAAVKIPIR*SPFTMT
Trigger: GGTCATGGTGAATGGAGACCATCGGATTGGGATCTT...CACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACACCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp ATTACACCAATCTTTCTCCTCTCTAGTCCAAGCCTGTGCCCACCTACCCTGAAGACAGAGGGAGTGGGTTaGGGGGTTTCTCAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: ITPIFLLSSPSLCPPTLKTEGVG*GVSQCG
Trigger: CCCACACTGAGAAACCCCCCAACCCACTCCCTCTGT...CTTCAGGGTAGGTGGGCACAGGCTTGGACTAGAGAGGAGAAAGATTGGTGTAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp TGGGTCAGGAGGAACCCCACTTCTTCCTTCATGGGACAACAAGTGGAGTGGGAACTGGTTCTCCCTCTCTaGCTAAGGAAGGATGGCGTA +
Preference number: 4 (lower is better)
Translates to: WVRRNPTSSFMGQQVEWELVLPL*LRKDGV
Trigger: TACGCCATCCTTCCTTAGCCAGAGAGGGAGAACCAG...TTCCCACTCCACTTGTTGTCCCATGAAGGAAGAAGTGGGGTTCCTCCTGACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR CAA 72 bp AGGGTCACATTCTCGCACTGCCAGATAGCAAGGACATaGCTTGGTATTGCACTGGGTCTTACAGCGACAGCC +
Preference number: 4 (lower is better)
Translates to: RVTFSHCQIART*LGIALGLTATA
Trigger: GGCTGTCGCTGTAAGACCCAGTGCAATACCAAGCAATGTCCTTGCTATCTGGCAGTGCGAGAATGTGACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588897.5
CDS-3UTR TCA 90 bp TGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTTTGAGGCAATTGCACTaGAGATCATGTCATTTGGGA +
Preference number: 4 (lower is better)
Translates to: CEHESQDSAATISAAVGPLRQLH*RSCHLG
Trigger: TCCCAAATGACATGATCTTCAGTGCAATTGCCTCAA...AGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp GGGGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGATTCTCAGGGAACATTaGGGCAATTGCACTGAAGAT +
Preference number: 4 (lower is better)
Translates to: GVSQCGRHSAGDSSSSGVILREH*GNCTED
Trigger: ATCTTCAGTGCAATTGCCTCAATGTTCCCTGAGAAT...CACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp GTCACAGGGGCGGTCTGGGTGGTCGCAGGGTTGGTAGTTGTACACTTGTGTGGATTGAACAGAAGTTGTTaGAGTAGGTGCCATGGAAGA +
Preference number: 4 (lower is better)
Translates to: VTGAVWVVAGLVVVHLCGLNRSC*SRCHGR
Trigger: TCTTCCATGGCACCTACTTCAACAACTTCTGTTCAA...TCCACACAAGTGTACAACTACCAACCCTGCGACCACCCAGACCGCCCCTGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588239.5
ENST00000588897.5
CDS-3UTR TCA 90 bp GGGGGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTTTGAACAGAAGTTGTTaGAGTAGGTGCCATGGAAGA +
Preference number: 4 (lower is better)
Translates to: GGFSVWETQCRRLEQQWCLNRSC*SRCHGR
Trigger: TCTTCCATGGCACCTACTTCAACAACTTCTGTTCAA...ACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp TTTATTGGCAATGAAGCCGCATGTATACCAGGCTCCCCTAGTCCCCACCACCTTTCTGTGAGGGGTTCATaGGCTCATCTGTTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: FIGNEAACIPGSPSPHHLSVRGS*AHLLAA
Trigger: AGCTGCCAACAGATGAGCTCATGAACCCCTCACAGA...AAGGTGGTGGGGACTAGGGGAGCCTGGTATACATGCGGCTTCATTGCCAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR TCA 90 bp CTGTCTCCCCTCTCATTGAGACAGTTTTGTGCCCTCTGGACATGGCAGAGGCCTTTCTCACAGAAATTCTaGGTCATGATGCAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: LSPLSLRQFCALWTWQRPFSQKF*VMMQGQ
Trigger: CTGCCCCTGCATCATGACTCAGAATTTCTGTGAGAA...AGGCCTCTGCCATGTCCAGAGGGCACAAAACTGTCTCAATGAGAGGGGAGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000592743.5
CDS-3UTR TCA 90 bp TTGAGACCCATCTTTAAAAGTGGGGGACAGCAGGGACAAAGGATGGGAAACTGGCCAGGGAAACGATTCTaGCAGTCTGGGTTGCACTGG +
Preference number: 4 (lower is better)
Translates to: LRPIFKSGGQQGQRMGNWPGKRF*QSGLHW
Trigger: CCAGTGCAACCCAGACTGTCAGAATCGTTTCCCTGG...CCAGTTTCCCATCCTTTGTCCCTGCTGTCCCCCACTTTTAAAGATGGGTCTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR TCA 90 bp TTGAGACCCATCTTTAAAAGTGGGGGACAGCAGGGACAAAGGATGGGAAACTGGCGATCCCCACGTACTTaGGAGCATCAGCTTGGCTGT +
Preference number: 4 (lower is better)
Translates to: LRPIFKSGGQQGQRMGNWRSPRT*EHQLGC
Trigger: ACAGCCAAGCTGATGCTCTCAAGTACGTGGGGATCG...CCAGTTTCCCATCCTTTGTCCCTGCTGTCCCCCACTTTTAAAGATGGGTCTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR TCA 90 bp CCTCATCTGAGTACTGATTCAGGGCATCGACCAACTCCAGAAAAACAGCATCACCGAGCAGCAGTGGTGTaGGCACGAAAGCCAAGACAG +
Preference number: 4 (lower is better)
Translates to: PHLSTDSGHRPTPEKQHHRAAVV*ARKPRQ
Trigger: CTGTCTTGGCTTTCGTGCTCACACCACTGCTGCTCG...GTGATGCTGTTTTTCTGGAGTTGGTCGATGCCCTGAATCAGTACTCAGATGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588897.5
CDS-3UTR TCA 90 bp AGTGTGTGGAAGGAGTGCAGAGATTGCTCCCGCTGCACAGACTTGGCATTGGGGGGGATCATCTCTTTTTaGGAAAAGGGTGTCCACTCA +
Preference number: 4 (lower is better)
Translates to: SVWKECRDCSRCTDLALGGIISF*EKGVHS
Trigger: TGAGTGGACACCCTTTTCTCAAAAAGAGATGATCCC...CCCCAATGCCAAGTCTGTGCAGCGGGAGCAATCTCTGCACTCCTTCCACACACT
52% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000588897.5
CDS-3UTR GCA 90 bp TGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTCTTTGCACCCATATTTaGCTGAAGCCGTTTAAGTTG +
Preference number: 4 (lower is better)
Translates to: CEHESQDSAATISAAVGPLCTHI*LKPFKL
Trigger: CAACTTAAACGGCTTCAGGCAAATATGGGTGCAAAG...AGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000592743.5
CDS-3UTR GCA 90 bp GGGGGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTCACATACAAAGCCTTTaGACCCATATTTGCCTGAAG +
Preference number: 4 (lower is better)
Translates to: GGFSVWETQCRRLEQQWCHIQSL*THICLK
Trigger: CTTCAGGCAAATATGGGTGCAAAGGCTTTGTATGTG...ACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000592743.5
CDS-3UTR GCA 90 bp TGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTCACATACAAAGCCTTTaGACCCATATTTGCCTGAAG +
Preference number: 4 (lower is better)
Translates to: CEHESQDSAATISAAVGPHIQSL*THICLK
Trigger: CTTCAGGCAAATATGGGTGCAAAGGCTTTGTATGTG...AGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000592743.5
CDS-3UTR GCA 90 bp ACAAACCACGGCGGATGCAGATTTCAGGATCATGCTGGGGCCTGGCCCATTTGGCAAATCCCGGGAAAATaGTCTCTATGGTACAAGGCT +
Preference number: 4 (lower is better)
Translates to: TNHGGCRFQDHAGAWPIWQIPGK*SLWYKA
Trigger: AGCCTTGTACCATAGAGAGCATTTTCCCGGGATTTG...CCAAATGGGCCAGGCCCCAGCATGATCCTGAAATCTGCATCCGCCGTGGTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415827.6
CDS-3UTR GCA 90 bp AGTCTGTGCTGCCTGCCAGGCTCGCCTCTAACCCAGACCACTTGTAGGCTCCAGCCATGTAGGGAATATTaGACAAAACCGTCTCATCTT +
Preference number: 4 (lower is better)
Translates to: SLCCLPGSPLTQTTCRLQPCREY*TKPSHL
Trigger: AAGATGAGACGGTTTTGTGCAATATTCCCTACATGG...CTGGAGCCTACAAGTGGTCTGGGTTAGAGGCGAGCCTGGCAGGCAGCACAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp GAAGGGAGAAGCCTGCTCCCTACTGTAACACTCCCAGGCCAATCTATACCCGCCTCTTTGCTGTCATCCTaGTTTCCATCTGAGGTGTCA +
Preference number: 4 (lower is better)
Translates to: EGRSLLPTVTLPGQSIPASLLSS*FPSEVS
Trigger: TGACACCTCAGATGGAAAGCAGGATGACAGCAAAGA...GGCGGGTATAGATTGGCCTGGGAGTGTTACAGTAGGGAGCAGGCTTCTCCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp TGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAAGCCAATCTTTGCTGTCATCCTaGTTTCCATCTGAGGTGTCA +
Preference number: 4 (lower is better)
Translates to: WETQCRRLEQQWCEHESQSLLSS*FPSEVS
Trigger: TGACACCTCAGATGGAAAGCAGGATGACAGCAAAGA...TTGGCTTTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp AGTGTGTGGAAGGAGTGCAGAGATTGCTCCCGCTGCACAGACTTGGCATTGGGGTCTTTGCTGTCATCCTaGTTTCCATCTGAGGTGTCA +
Preference number: 4 (lower is better)
Translates to: SVWKECRDCSRCTDLALGSLLSS*FPSEVS
Trigger: TGACACCTCAGATGGAAAGCAGGATGACAGCAAAGA...CCCCAATGCCAAGTCTGTGCAGCGGGAGCAATCTCTGCACTCCTTCCACACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
CDS-3UTR GCA 90 bp GGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGTCTTTGCTGTCATCCTaGTTTCCATCTGAGGTGTCA +
Preference number: 4 (lower is better)
Translates to: GFSVWETQCRRLEQQWCESLLSS*FPSEVS
Trigger: TGACACCTCAGATGGAAAGCAGGATGACAGCAAAGA...CTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp CAGTGGTGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGCTGGCAGATCTTCTTTaGTGTCATCCTGCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: QWCEHESQDSAATISAAVLADLL*CHPAFH
Trigger: ATGGAAAGCAGGATGACAGCAAAGAAGATCTGCCAG...CACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACACCACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp CAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAACTGGCAGATCTTCTTTaGTGTCATCCTGCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: QCGRHSAGDSSSSGVSTKLADLL*CHPAFH
Trigger: ATGGAAAGCAGGATGACAGCAAAGAAGATCTGCCAG...TTTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp GGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCTGGCAGATCTTCTTTaGTGTCATCCTGCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: GFSVWETQCRRLEQQWCELADLL*CHPAFH
Trigger: ATGGAAAGCAGGATGACAGCAAAGAAGATCTGCCAG...CTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp TCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAACATGGCATACTCCTTTaGTCCTTCCAGCAAAAGGAA +
Preference number: 4 (lower is better)
Translates to: SVWETQCRRLEQQWCEHEHGILL*SFQQKE
Trigger: TTCCTTTTGCTGGAAGGAGCAAAGGAGTATGCCATG...TTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp GGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCATGGCATACTCCTTTaGTCCTTCCAGCAAAAGGAA +
Preference number: 4 (lower is better)
Translates to: GFSVWETQCRRLEQQWCEHGILL*SFQQKE
Trigger: TTCCTTTTGCTGGAAGGAGCAAAGGAGTATGCCATG...CTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp TCACGCATAAGTCATCCACCCCAGCCTGTGCTCGCTTCTTCTGAGGCCAGAGAAGTCACATTCTCGCACTaGCAGATAGCAAGGACATTG +
Preference number: 4 (lower is better)
Translates to: SRISHPPQPVLASSEAREVTFSH*QIARTL
Trigger: CAATGTCCTTGCTATCTGGCAGTGCGAGAATGTGAC...TTCTCTGGCCTCAGAAGAAGCGAGCACAGGCTGGGGTGGATGACTTATGCGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp TCACGCATAAGTCATCCACCCCAGCCTGTGCTCGCTTCTTCTGAGGCCAGAGAAGTCCACGCTGGATGCTaGAGTTTTTACAGGAAACCA +
Preference number: 4 (lower is better)
Translates to: SRISHPPQPVLASSEAREVHAGC*SFYRKP
Trigger: TGGTTTCCTGTAAAAACTGCAGCATCCAGCGTGGAC...TTCTCTGGCCTCAGAAGAAGCGAGCACAGGCTGGGGTGGATGACTTATGCGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp TCACGCATAAGTCATCCACCCCAGCCTGTGCTCGCTTCTTCTGAGGCCAGAGAAACAAACCACGGCGGATaGAGATTTCAGGATCATGCT +
Preference number: 4 (lower is better)
Translates to: SRISHPPQPVLASSEARETNHGG*RFQDHA
Trigger: AGCATGATCCTGAAATCTGCATCCGCCGTGGTTTGT...TTCTCTGGCCTCAGAAGAAGCGAGCACAGGCTGGGGTGGATGACTTATGCGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp GCCTGGGACAGGTGGTCTACCTGCTTCTTCTCCCACTTCAGATACCCTCTGCCAGGAGGTAGGGGGATTTaGTATTTCCATCTTGCTGTA +
Preference number: 4 (lower is better)
Translates to: AWDRWSTCFFSHFRYPLPGGRGI*YFHLAV
Trigger: TACAGCAAGATGGAAATACCAAATCCCCCTACCTCC...TGGCAGAGGGTATCTGAAGTGGGAGAAGAAGCAGGTAGACCACCTGTCCCAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp TCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAGGAGGTAGGGGGATTTaGTATTTCCATCTTGCTGTA +
Preference number: 4 (lower is better)
Translates to: SVWETQCRRLEQQWCEHEGGRGI*YFHLAV
Trigger: TACAGCAAGATGGAAATACCAAATCCCCCTACCTCC...TTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000592743.5
CDS-3UTR CCA 90 bp AGGGGCGGTCTGGGTGGTCGCAGGGTTGGTAGTTGTACACTTGTGTGGAAGAGTGGAGGTAGGGGGATTTaGTATTTCCATCTTGCTGTA +
Preference number: 4 (lower is better)
Translates to: RGGLGGRRVGSCTLVWKSGGRGI*YFHLAV
Trigger: TACAGCAAGATGGAAATACCAAATCCCCCTACCTCC...ACTCTTCCACACAAGTGTACAACTACCAACCCTGCGACCACCCAGACCGCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588897.5
CDS-3UTR CCA 90 bp AGTCCATTCCACAGGCTCCGAGGGTGCTTCCACTACGCAGAGTTGAGGTGGGGCTCTCTTTCTTGTTACTaGCAGATCTTCTTTGCTGTC +
Preference number: 4 (lower is better)
Translates to: SPFHRLRGCFHYAELRWGSLSCY*QIFFAV
Trigger: GACAGCAAAGAAGATCTGCCAGTAACAAGAAAGAGA...GCCCCACCTCAACTCTGCGTAGTGGAAGCACCCTCGGAGCCTGTGGAATGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586935.5
ENST00000588897.5
CDS-3UTR CCA 90 bp GAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGGAAGATCATGTCATTTaGGAACTGTTTCTTGGAACT +
Preference number: 4 (lower is better)
Translates to: EHESQDSAATISAAVGPGEDHVI*ELFLGT
Trigger: AGTTCCAAGAAACAGTTCCCAAATGACATGATCTTC...CCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp AGCACTGACTATGTGGTGCCTTCTCCGGCGACGACCAGAGCACTTGGAGCGGGGGAAGATCATGTCATTTaGGAACTGTTTCTTGGAACT +
Preference number: 4 (lower is better)
Translates to: STDYVVPSPATTRALGAGEDHVI*ELFLGT
Trigger: AGTTCCAAGAAACAGTTCCCAAATGACATGATCTTC...CCCCGCTCCAAGTGCTCTGGTCGTCGCCGGAGAAGGCACCACATAGTCAGTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588239.5
ENST00000588897.5
CDS-3UTR CCA 90 bp AGGGGCGGTCTGGGTGGTCGCAGGGTTGGTAGTTGTACACTTGTGTGGAAGAGTGCAGTCTGTGCCACATaGTTCTGGTTCAATCTTGAT +
Preference number: 4 (lower is better)
Translates to: RGGLGGRRVGSCTLVWKSAVCAT*FWFNLD
Trigger: ATCAAGATTGAACCAGAACCATGTGGCACAGACTGC...ACTCTTCCACACAAGTGTACAACTACCAACCCTGCGACCACCCAGACCGCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588239.5
ENST00000588897.5
CDS-3UTR CCA 90 bp CAGTGGTGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGCAGTCTGTGCCACATaGTTCTGGTTCAATCTTGAT +
Preference number: 4 (lower is better)
Translates to: QWCEHESQDSAATISAAVAVCAT*FWFNLD
Trigger: ATCAAGATTGAACCAGAACCATGTGGCACAGACTGC...CACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACACCACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp TCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAGCAGTCTGTGCCACATaGTTCTGGTTCAATCTTGAT +
Preference number: 4 (lower is better)
Translates to: SVWETQCRRLEQQWCEHEAVCAT*FWFNLD
Trigger: ATCAAGATTGAACCAGAACCATGTGGCACAGACTGC...TTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp AGACCTGCTTGCACGTCTTGGTCCCCAGAAGCCTGGCTATTGAACAGAAGTTGTGGGGGTTGTGGAGCATaGCATACTCCTTTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: RPACTSWSPEAWLLNRSCGGCGA*HTPLLL
Trigger: AAGGAGCAAAGGAGTATGCCATGCTCCACAACCCCC...ACAACTTCTGTTCAATAGCCAGGCTTCTGGGGACCAAGACGTGCAAGCAGGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588239.5
ENST00000588897.5
CDS-3UTR CCA 90 bp TGGGTCAGGAGGAACCCCACTTCTTCCTTCATGGGACAACAAGTGGAGTGGGAAGAGTTGAGGTGGGGCTaGACTAGCCTTCTGTTTTGT +
Preference number: 4 (lower is better)
Translates to: WVRRNPTSSFMGQQVEWEELRWG*TSLLFC
Trigger: ACAAAACAGAAGGCTAGTCCAGCCCCACCTCAACTC...TTCCCACTCCACTTGTTGTCCCATGAAGGAAGAAGTGGGGTTCCTCCTGACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp TCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAAGCAAGGACATTGCTTaGTATTGCACTGGGTCTTAC +
Preference number: 4 (lower is better)
Translates to: SVWETQCRRLEQQWCEHESKDIA*YCTGSY
Trigger: GTAAGACCCAGTGCAATACCAAGCAATGTCCTTGCT...TTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp GGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGAGCAAGGACATTGCTTaGTATTGCACTGGGTCTTAC +
Preference number: 4 (lower is better)
Translates to: GFSVWETQCRRLEQQWCESKDIA*YCTGSY
Trigger: GTAAGACCCAGTGCAATACCAAGCAATGTCCTTGCT...CTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp CAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAAAGCAAGGACATTGCTTaGTATTGCACTGGGTCTTAC +
Preference number: 4 (lower is better)
Translates to: QCGRHSAGDSSSSGVSTKSKDIA*YCTGSY
Trigger: GTAAGACCCAGTGCAATACCAAGCAATGTCCTTGCT...TTTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp GTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCAGCAAGGACATTGCTTaGTATTGCACTGGGTCTTAC +
Preference number: 4 (lower is better)
Translates to: VSQCGRHSAGDSSSSGVSSKDIA*YCTGSY
Trigger: GTAAGACCCAGTGCAATACCAAGCAATGTCCTTGCT...GCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp CACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGAGGCTTTGGCATAACAGTTaGGATTCACTGAATGATTTG +
Preference number: 4 (lower is better)
Translates to: HESQDSAATISAAVGPGRLWHNS*DSLNDL
Trigger: CAAATCATTCAGTGAATCCCAACTGTTATGCCAAAG...CCTCCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp CTGTCTCCCCTCTCATTGAGACAGTTTTGTGCCCTCTGGACATGGCAGAGGCCTAAGATCCCAATCCGATaGTCTCCATTCACCATGACC +
Preference number: 4 (lower is better)
Translates to: LSPLSLRQFCALWTWQRPKIPIR*SPFTMT
Trigger: GGTCATGGTGAATGGAGACCATCGGATTGGGATCTT...AGGCCTCTGCCATGTCCAGAGGGCACAAAACTGTCTCAATGAGAGGGGAGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000592743.5
CDS-3UTR CCA 90 bp GAGAAGCCTGCTCCCTACTGTAACACTCCCAGGCCAATCTATACCCGCCCACACTTAACTACTATCATCTaGCTGGTTCTCCCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: EKPAPYCNTPRPIYTRPHLTTII*LVLPLW
Trigger: CCAGAGAGGGAGAACCAGCCAGATGATAGTAGTTAA...GTGTGGGCGGGTATAGATTGGCCTGGGAGTGTTACAGTAGGGAGCAGGCTTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp CTTAGGACCACAGAGGTTTGCCTGCATCCCAATAACATAAGGACTCTTGATGTGGAATGCCAGAGAGGGTaGCACCACAGCCTGGGACAG +
Preference number: 4 (lower is better)
Translates to: LRTTEVCLHPNNIRTLDVECQRG*HHSLGQ
Trigger: CTGTCCCAGGCTGTGGTGCCACCCTCTCTGGCATTC...CACATCAAGAGTCCTTATGTTATTGGGATGCAGGCAAACCTCTGTGGTCCTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp AACACTTCTCCATCTATCTCCAGAGTACACAGAGAAGGCTTTCTCAAAGCCTCCGAATGCCAGAGAGGGTaGCACCACAGCCTGGGACAG +
Preference number: 4 (lower is better)
Translates to: NTSPSISRVHREGFLKASECQRG*HHSLGQ
Trigger: CTGTCCCAGGCTGTGGTGCCACCCTCTCTGGCATTC...GGAGGCTTTGAGAAAGCCTTCTCTGTGTACTCTGGAGATAGATGGAGAAGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR TCA 90 bp TGCACTGAGGGGGAAGTGCATTGGGGTCTGACATCTCTGTTAGTTCTCGATACCTCCTCATCTGAGTACTaGTTCAGGGCATCGACCAAC +
Preference number: 4 (lower is better)
Translates to: CTEGEVHWGLTSLLVLDTSSSEY*FRASTN
Trigger: GTTGGTCGATGCCCTGAATCAGTACTCAGATGAGGA...GGTATCGAGAACTAACAGAGATGTCAGACCCCAATGCACTTCCCCCTCAGTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
CDS-3UTR TCA 90 bp GAGAAGCCTGCTCCCTACTGTAACACTCCCAGGCCAATCTATACCCGCCCACACTTGAGGCAATTGCACTaGAGATCATGTCATTTGGGA +
Preference number: 4 (lower is better)
Translates to: EKPAPYCNTPRPIYTRPHLRQLH*RSCHLG
Trigger: TCCCAAATGACATGATCTTCAGTGCAATTGCCTCAA...GTGTGGGCGGGTATAGATTGGCCTGGGAGTGTTACAGTAGGGAGCAGGCTTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR TCA 90 bp TCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAATTGAGGCAATTGCACTaGAGATCATGTCATTTGGGA +
Preference number: 4 (lower is better)
Translates to: SVWETQCRRLEQQWCEHELRQLH*RSCHLG
Trigger: TCCCAAATGACATGATCTTCAGTGCAATTGCCTCAA...TTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp GAGAAGCCTGCTCCCTACTGTAACACTCCCAGGCCAATCTATACCCGCCCACACATTCTCAGGGAACATTaGGGCAATTGCACTGAAGAT +
Preference number: 4 (lower is better)
Translates to: EKPAPYCNTPRPIYTRPHILREH*GNCTED
Trigger: ATCTTCAGTGCAATTGCCTCAATGTTCCCTGAGAAT...GTGTGGGCGGGTATAGATTGGCCTGGGAGTGTTACAGTAGGGAGCAGGCTTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR TCA 90 bp TCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAATTCTCAGGGAACATTaGGGCAATTGCACTGAAGAT +
Preference number: 4 (lower is better)
Translates to: SVWETQCRRLEQQWCEHEILREH*GNCTED
Trigger: ATCTTCAGTGCAATTGCCTCAATGTTCCCTGAGAAT...TTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp GTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCATTCTCAGGGAACATTaGGGCAATTGCACTGAAGAT +
Preference number: 4 (lower is better)
Translates to: VSQCGRHSAGDSSSSGVSILREH*GNCTED
Trigger: ATCTTCAGTGCAATTGCCTCAATGTTCCCTGAGAAT...GCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp CCTACTGTAACACTCCCAGGCCAATCTATACCCGCCCACACCCTTTCTACTCAATGTTTTGTGGGAGTCTaGCAGCGAGAGTTAGCCTCT +
Preference number: 4 (lower is better)
Translates to: PTVTLPGQSIPAHTLSTQCFVGV*QRELAS
Trigger: AGAGGCTAACTCTCGCTGTCAGACTCCCACAAAACA...TTGAGTAGAAAGGGTGTGGGCGGGTATAGATTGGCCTGGGAGTGTTACAGTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR TCA 90 bp ACAAACCACGGCGGATGCAGATTTCAGGATCATGCTGGGGCCTGGCCCATTTGGTTGAACAGAAGTTGTTaGAGTAGGTGCCATGGAAGA +
Preference number: 4 (lower is better)
Translates to: TNHGGCRFQDHAGAWPIWLNRSC*SRCHGR
Trigger: TCTTCCATGGCACCTACTTCAACAACTTCTGTTCAA...CCAAATGGGCCAGGCCCCAGCATGATCCTGAAATCTGCATCCGCCGTGGTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR TCA 90 bp GGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGTTGAACAGAAGTTGTTaGAGTAGGTGCCATGGAAGA +
Preference number: 4 (lower is better)
Translates to: GFSVWETQCRRLEQQWCELNRSC*SRCHGR
Trigger: TCTTCCATGGCACCTACTTCAACAACTTCTGTTCAA...CTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp TTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACTTGAACAGAAGTTGTTaGAGTAGGTGCCATGGAAGA +
Preference number: 4 (lower is better)
Translates to: FSVWETQCRRLEQQWCEHLNRSC*SRCHGR
Trigger: TCTTCCATGGCACCTACTTCAACAACTTCTGTTCAA...GTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp TCTGAAGAACTGGAGGCCCAGTCATTGCCTGTGTCCCTGTCACTGTCTCCTTCTTCTTTGACTGCAAACTaGAAGACCTGCTTGCACGTC +
Preference number: 4 (lower is better)
Translates to: SEELEAQSLPVSLSLSPSSLTAN*KTCLHV
Trigger: GACGTGCAAGCAGGTCTTTCAGTTTGCAGTCAAAGA...AGAAGGAGACAGTGACAGGGACACAGGCAATGACTGGGCCTCCAGTTCTTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588239.5
ENST00000588897.5
CDS-3UTR TCA 90 bp TTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACCAGCTTCAGGATAAGTaGTTCTTTGACTGCAAACTG +
Preference number: 4 (lower is better)
Translates to: FSVWETQCRRLEQQWCEHQLQDK*FFDCKL
Trigger: CAGTTTGCAGTCAAAGAATCACTTATCCTGAAGCTG...GTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp GGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCAGCTTCAGGATAAGTaGTTCTTTGACTGCAAACTG +
Preference number: 4 (lower is better)
Translates to: GFSVWETQCRRLEQQWCEQLQDK*FFDCKL
Trigger: CAGTTTGCAGTCAAAGAATCACTTATCCTGAAGCTG...CTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp TGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAAGCCAACAGCTTCAGGATAAGTaGTTCTTTGACTGCAAACTG +
Preference number: 4 (lower is better)
Translates to: WETQCRRLEQQWCEHESQQLQDK*FFDCKL
Trigger: CAGTTTGCAGTCAAAGAATCACTTATCCTGAAGCTG...TTGGCTTTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp CAGTGGTGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGCAGCTTCAGGATAAGTaGTTCTTTGACTGCAAACTG +
Preference number: 4 (lower is better)
Translates to: QWCEHESQDSAATISAAVQLQDK*FFDCKL
Trigger: CAGTTTGCAGTCAAAGAATCACTTATCCTGAAGCTG...CACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACACCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp TGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTCACAGTATTCAGAAATaGATTCGTTCTTCTGCACAG +
Preference number: 4 (lower is better)
Translates to: CEHESQDSAATISAAVGPHSIQK*IRSSAQ
Trigger: CTGTGCAGAAGAACGAATTCATTTCTGAATACTGTG...AGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp TGCACTGAGGGGGAAGTGCATTGGGGTCTGACATCTCTGTTAGTTCTCGATACCACAGGCTTCATTGACTaGACAGGTTGGACACGAAGC +
Preference number: 4 (lower is better)
Translates to: CTEGEVHWGLTSLLVLDTTGFID*TGWTRS
Trigger: GCTTCGTGTCCAACCTGTTCAGTCAATGAAGCCTGT...GGTATCGAGAACTAACAGAGATGTCAGACCCCAATGCACTTCCCCCTCAGTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
CDS-3UTR TCA 90 bp GGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCTATGGTACACTTTTTaGGAAAAGGGTGTCCACTCA +
Preference number: 4 (lower is better)
Translates to: GFSVWETQCRRLEQQWCELWYTF*EKGVHS
Trigger: TGAGTGGACACCCTTTTCTCAAAAAGTGTACCATAG...CTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000428826.7
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp CAGTGGTGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGCTATGGTACACTTTTTaGGAAAAGGGTGTCCACTCA +
Preference number: 4 (lower is better)
Translates to: QWCEHESQDSAATISAAVLWYTF*EKGVHS
Trigger: TGAGTGGACACCCTTTTCTCAAAAAGTGTACCATAG...CACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACACCACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000428826.7
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp TTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACCATCTTCTACCTTTTTaGGAAAAGGGTGTCCACTCA +
Preference number: 4 (lower is better)
Translates to: FSVWETQCRRLEQQWCEHHLLPF*EKGVHS
Trigger: TGAGTGGACACCCTTTTCTCAAAAAGGTAGAAGATG...GTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585893.5
CDS-3UTR GCA 90 bp CAGTGGTGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGTTGGGTTTTACAGTGTaGCTCTGTTCTTCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: QWCEHESQDSAATISAAVLGFTV*LCSSGE
Trigger: TTCTCCTGAAGAACAGAGGCACACTGTAAAACCCAA...CACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACACCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
CDS-3UTR GCA 90 bp GTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCCTTTGCACCCATATTTaGCTGAAGCCGTTTAAGTTG +
Preference number: 4 (lower is better)
Translates to: VSQCGRHSAGDSSSSGVSLCTHI*LKPFKL
Trigger: CAACTTAAACGGCTTCAGGCAAATATGGGTGCAAAG...GCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000592743.5
CDS-3UTR GCA 90 bp AGTGTGTGGAAGGAGTGCAGAGATTGCTCCCGCTGCACAGACTTGGCATTGGGGCTTTGCACCCATATTTaGCTGAAGCCGTTTAAGTTG +
Preference number: 4 (lower is better)
Translates to: SVWKECRDCSRCTDLALGLCTHI*LKPFKL
Trigger: CAACTTAAACGGCTTCAGGCAAATATGGGTGCAAAG...CCCCAATGCCAAGTCTGTGCAGCGGGAGCAATCTCTGCACTCCTTCCACACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
CDS-3UTR GCA 90 bp CAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAACTTTGCACCCATATTTaGCTGAAGCCGTTTAAGTTG +
Preference number: 4 (lower is better)
Translates to: QCGRHSAGDSSSSGVSTKLCTHI*LKPFKL
Trigger: CAACTTAAACGGCTTCAGGCAAATATGGGTGCAAAG...TTTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000592743.5
CDS-3UTR GCA 90 bp TTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACCACATACAAAGCCTTTaGACCCATATTTGCCTGAAG +
Preference number: 4 (lower is better)
Translates to: FSVWETQCRRLEQQWCEHHIQSL*THICLK
Trigger: CTTCAGGCAAATATGGGTGCAAAGGCTTTGTATGTG...GTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000592743.5
CDS-3UTR GCA 90 bp AGTGTGTGGAAGGAGTGCAGAGATTGCTCCCGCTGCACAGACTTGGCATTGGGGCACATACAAAGCCTTTaGACCCATATTTGCCTGAAG +
Preference number: 4 (lower is better)
Translates to: SVWKECRDCSRCTDLALGHIQSL*THICLK
Trigger: CTTCAGGCAAATATGGGTGCAAAGGCTTTGTATGTG...CCCCAATGCCAAGTCTGTGCAGCGGGAGCAATCTCTGCACTCCTTCCACACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
CDS-3UTR GCA 90 bp ACTGAGGGGGAAGTGCATTGGGGTCTGACATCTCTGTTAGTTCTCGATACCTCTAAGGAGTGCAGAGATTaGTCCCGCTGCACAGACTTG +
Preference number: 4 (lower is better)
Translates to: TEGEVHWGLTSLLVLDTSKECRD*SRCTDL
Trigger: CAAGTCTGTGCAGCGGGAGCAATCTCTGCACTCCTT...AGAGGTATCGAGAACTAACAGAGATGTCAGACCCCAATGCACTTCCCCCTCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
CDS-3UTR GCA 90 bp TGGGTCAGGAGGAACCCCACTTCTTCCTTCATGGGACAACAAGTGGAGTGGGAAAATCTTCCTGCAGTGTaGAGCCCACAATCTGTGCTT +
Preference number: 4 (lower is better)
Translates to: WVRRNPTSSFMGQQVEWENLPAV*SPQSVL
Trigger: AAGCACAGATTGTGGGCTGCACACTGCAGGAAGATT...TTCCCACTCCACTTGTTGTCCCATGAAGGAAGAAGTGGGGTTCCTCCTGACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp TGCCAGATAGCAAGGACATTGCTTGGTATTGCACTGGGTCTTACAGCGACAGCCTCTGACAGTCTGGGTTaGACTGGCAGAACTTCTCAC +
Preference number: 4 (lower is better)
Translates to: CQIARTLLGIALGLTATASDSLG*TGRTSH
Trigger: GTGAGAAGTTCTGCCAGTGCAACCCAGACTGTCAGA...GGCTGTCGCTGTAAGACCCAGTGCAATACCAAGCAATGTCCTTGCTATCTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588897.5
CDS-3UTR GCA 90 bp TCGTTCTTCTGCACAGACTCCTTTATGAAGGTGCCCCATCCGGCCACATCAGAGGACATTGCTTGGTATTaGACTGGGTCTTACAGCGAC +
Preference number: 4 (lower is better)
Translates to: SFFCTDSFMKVPHPATSEDIAWY*TGSYSD
Trigger: GTCGCTGTAAGACCCAGTGCAATACCAAGCAATGTC...CTCTGATGTGGCCGGATGGGGCACCTTCATAAAGGAGTCTGTGCAGAAGAACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588897.5
CDS-3UTR GCA 90 bp TTCTGTCAGGAGTTGCTGGGTGCGGGGTACGTGTGTGCCCTCCAGTGTGGTGAGATGAATTCGTTCTTCTaGACAGACTCCTTTATGAAG +
Preference number: 4 (lower is better)
Translates to: FCQELLGAGYVCALQCGEMNSFF*TDSFMK
Trigger: CTTCATAAAGGAGTCTGTGCAGAAGAACGAATTCAT...CTCACCACACTGGAGGGCACACACGTACCCCGCACCCAGCAACTCCTGACAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp AGGGTTGGTAGTTGTACACTTGTGTGGAAGAGTTATCTTTCTTCAGCTGAATCTCGCTACCATAAGTGCTaGCGTGGGGCCTGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: RVGSCTLVWKSYLSSAESRYHKC*RGAWEG
Trigger: GCCCTCCCAGGCCCCACGGCAGCACTTATGGTAGCG...AGATTCAGCTGAAGAAAGATAACTCTTCCACACAAGTGTACAACTACCAACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588897.5
CDS-3UTR GCA 90 bp AACACTTCTCCATCTATCTCCAGAGTACACAGAGAAGGCTTTCTCAAAGCCTCCTCTGAGTTCAGTCTGTaGTGCCTGCCAGGCTCGCCT +
Preference number: 4 (lower is better)
Translates to: NTSPSISRVHREGFLKASSEFSL*CLPGSP
Trigger: AGGCGAGCCTGGCAGGCAGCACAGACTGAACTCAGA...GGAGGCTTTGAGAAAGCCTTCTCTGTGTACTCTGGAGATAGATGGAGAAGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp TTTATTGGCAATGAAGCCGCATGTATACCAGGCTCCCCTAGTCCCCACCACCTTGACAGGTGGTCTACCTaGTTCTTCTCCCACTTCAGA +
Preference number: 4 (lower is better)
Translates to: FIGNEAACIPGSPSPHHLDRWST*FFSHFR
Trigger: TCTGAAGTGGGAGAAGAAGCAGGTAGACCACCTGTC...AAGGTGGTGGGGACTAGGGGAGCCTGGTATACATGCGGCTTCATTGCCAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp GTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCTTGGTATTTCCATCTTaGTGTAATCCTCCATCCCGA +
Preference number: 4 (lower is better)
Translates to: VSQCGRHSAGDSSSSGVSLVFPS*CNPPSR
Trigger: TCGGGATGGAGGATTACAGCAAGATGGAAATACCAA...GCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592743.5
CDS-3UTR CCA 90 bp TTTATTGGCAATGAAGCCGCATGTATACCAGGCTCCCCTAGTCCCCACCACCTTGAGGGGGAAGTGCATTaGGGTCTGACATCTCTGTTA +
Preference number: 4 (lower is better)
Translates to: FIGNEAACIPGSPSPHHLEGEVH*GLTSLL
Trigger: TAACAGAGATGTCAGACCCCAATGCACTTCCCCCTC...AAGGTGGTGGGGACTAGGGGAGCCTGGTATACATGCGGCTTCATTGCCAATAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp CCTCATCTGAGTACTGATTCAGGGCATCGACCAACTCCAGAAAAACAGCATCACGCACAGACTTGGCATTaGGGCCATCGATGTTGGGTG +
Preference number: 4 (lower is better)
Translates to: PHLSTDSGHRPTPEKQHHAQTWH*GHRCWV
Trigger: CACCCAACATCGATGGCCCCAATGCCAAGTCTGTGC...GTGATGCTGTTTTTCTGGAGTTGGTCGATGCCCTGAATCAGTACTCAGATGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
CDS-3UTR CCA 90 bp GAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGAGTTGTACACTTGTGTaGAAGAGTTATCTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: EHESQDSAATISAAVGPGSCTLV*KSYLSS
Trigger: TGAAGAAAGATAACTCTTCCACACAAGTGTACAACT...CCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp CTCCCTACTGTAACACTCCCAGGCCAATCTATACCCGCCCACACCCTTTCTACTCAGTCTGGGTTGCACTaGCAGAACTTCTCACAGAAA +
Preference number: 4 (lower is better)
Translates to: LPTVTLPGQSIPAHTLSTQSGLH*QNFSQK
Trigger: TTTCTGTGAGAAGTTCTGCCAGTGCAACCCAGACTG...AGTAGAAAGGGTGTGGGCGGGTATAGATTGGCCTGGGAGTGTTACAGTAGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp TCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAATTCTTAAGTCCACGCTaGATGCTGCAGTTTTTACAG +
Preference number: 4 (lower is better)
Translates to: SVWETQCRRLEQQWCEHEFLSPR*MLQFLQ
Trigger: CTGTAAAAACTGCAGCATCCAGCGTGGACTTAAGAA...TTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp TGCTTCTTAAGTCCACGCTGGATGCTGCAGTTTTTACAGGAAACCACCTTGCAGGGGGGTTTCTCAGTGTaGGAGACACAGTGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: CFLSPRWMLQFLQETTLQGGFSV*ETQCRR
Trigger: TCTCCTGCACTGTGTCTCCCACACTGAGAAACCCCC...CTGCAAGGTGGTTTCCTGTAAAAACTGCAGCATCCAGCGTGGACTTAAGAAGCA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000588897.5
CDS-3UTR CCA 90 bp CTTTGGAGGAGCTGGAGCACTGGTGTCTGTTCCCAGGAATCTGAAAACACTTCTGAACTTTGGAGGAGCTaGAGCACTGGTGTCTGTTCC +
Preference number: 4 (lower is better)
Translates to: LWRSWSTGVCSQESENTSELWRS*STGVCS
Trigger: GGAACAGACACCAGTGCTCCAGCTCCTCCAAAGTTC...AGAAGTGTTTTCAGATTCCTGGGAACAGACACCAGTGCTCCAGCTCCTCCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp CTTTGGAGGAGCTGGAGCACTGGTGTCTGTTCCCAGGAATCTGAAAACACTTCTTGGGCCTTGCCTCTATaGGGAATGGAAGGCCTGAAA +
Preference number: 4 (lower is better)
Translates to: LWRSWSTGVCSQESENTSWALPL*GMEGLK
Trigger: TTTCAGGCCTTCCATTCCCCATAGAGGCAAGGCCCA...AGAAGTGTTTTCAGATTCCTGGGAACAGACACCAGTGCTCCAGCTCCTCCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR TCA 90 bp CTTTGGAGGAGCTGGAGCACTGGTGTCTGTTCCCAGGAATCTGAAAACACTTCTCAAGGCTTCATTGACTaGACAGGTTGGACACGAAGC +
Preference number: 4 (lower is better)
Translates to: LWRSWSTGVCSQESENTSQGFID*TGWTRS
Trigger: GCTTCGTGTCCAACCTGTTCAGTCAATGAAGCCTTG...AGAAGTGTTTTCAGATTCCTGGGAACAGACACCAGTGCTCCAGCTCCTCCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415827.6
CDS-3UTR TCA 90 bp CTTTGGAGGAGCTGGAGCACTGGTGTCTGTTCCCAGGAATCTGAAAACACTTCTATCCTGCTTTCCATCTaGGGTGTCATTGTGCCCTTC +
Preference number: 4 (lower is better)
Translates to: LWRSWSTGVCSQESENTSILLSI*GVIVPF
Trigger: GAAGGGCACAATGACACCTCAGATGGAAAGCAGGAT...AGAAGTGTTTTCAGATTCCTGGGAACAGACACCAGTGCTCCAGCTCCTCCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR TCA 90 bp TGGAGCGGGGGTTGTGGAGCATGGCATACTCCTTTGCTCCTTCCAGCAAAAGGAATTCTCAGGGAACATTaGGGCAATTGCACTGAAGAT +
Preference number: 4 (lower is better)
Translates to: WSGGCGAWHTPLLLPAKGILREH*GNCTED
Trigger: ATCTTCAGTGCAATTGCCTCAATGTTCCCTGAGAAT...TCCTTTTGCTGGAAGGAGCAAAGGAGTATGCCATGCTCCACAACCCCCGCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588239.5
ENST00000588897.5
CDS-3UTR TCA 90 bp GGGAACATTGAGGCAATTGCACTGAAGATCATGTCATTTGGGAACTGTTTCTTGTCCACTACGCAGAGTTaGGGTGGGGCTGGACTAGCC +
Preference number: 4 (lower is better)
Translates to: GNIEAIALKIMSFGNCFLSTTQS*GGAGLA
Trigger: GGCTAGTCCAGCCCCACCTCAACTCTGCGTAGTGGA...CAAGAAACAGTTCCCAAATGACATGATCTTCAGTGCAATTGCCTCAATGTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588897.5
CDS-3UTR TCA 90 bp TCTGTCTCCCCTCTCATTGAGACAGTTTTGTGCCCTCTGGACATGGCAGAGGCCCAGCTTCAGGATAAGTaGTTCTTTGACTGCAAACTG +
Preference number: 4 (lower is better)
Translates to: SVSPLIETVLCPLDMAEAQLQDK*FFDCKL
Trigger: CAGTTTGCAGTCAAAGAATCACTTATCCTGAAGCTG...GGCCTCTGCCATGTCCAGAGGGCACAAAACTGTCTCAATGAGAGGGGAGACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000592743.5
CDS-3UTR TCA 90 bp CCTGGGACAGGTGGTCTACCTGCTTCTTCTCCCACTTCAGATACCCTCTGCCAGCACAGTATTCAGAAATaGATTCGTTCTTCTGCACAG +
Preference number: 4 (lower is better)
Translates to: PGTGGLPASSPTSDTLCQHSIQK*IRSSAQ
Trigger: CTGTGCAGAAGAACGAATTCATTTCTGAATACTGTG...CTGGCAGAGGGTATCTGAAGTGGGAGAAGAAGCAGGTAGACCACCTGTCCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR TCA 90 bp TGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAAGCCAACACAGTATTCAGAAATaGATTCGTTCTTCTGCACAG +
Preference number: 4 (lower is better)
Translates to: WETQCRRLEQQWCEHESQHSIQK*IRSSAQ
Trigger: CTGTGCAGAAGAACGAATTCATTTCTGAATACTGTG...TTGGCTTTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp TTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACCACAGTATTCAGAAATaGATTCGTTCTTCTGCACAG +
Preference number: 4 (lower is better)
Translates to: FSVWETQCRRLEQQWCEHHSIQK*IRSSAQ
Trigger: CTGTGCAGAAGAACGAATTCATTTCTGAATACTGTG...GTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp CAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAACACAGTATTCAGAAATaGATTCGTTCTTCTGCACAG +
Preference number: 4 (lower is better)
Translates to: QCGRHSAGDSSSSGVSTKHSIQK*IRSSAQ
Trigger: CTGTGCAGAAGAACGAATTCATTTCTGAATACTGTG...TTTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR TCA 90 bp CTTAGGACCACAGAGGTTTGCCTGCATCCCAATAACATAAGGACTCTTGATGTGGGGAACTGCCTAAGTTaGTTCCTGAGGCCACAGCCT +
Preference number: 4 (lower is better)
Translates to: LRTTEVCLHPNNIRTLDVGNCLS*FLRPQP
Trigger: AGGCTGTGGCCTCAGGAATCAACTTAGGCAGTTCCC...CACATCAAGAGTCCTTATGTTATTGGGATGCAGGCAAACCTCTGTGGTCCTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR TCA 90 bp CTTAGGACCACAGAGGTTTGCCTGCATCCCAATAACATAAGGACTCTTGATGTGTGTGCCCACCTACCCTaGAGCGATAAGCAACACTGG +
Preference number: 4 (lower is better)
Translates to: LRTTEVCLHPNNIRTLDVCAHLP*SDKQHW
Trigger: CCAGTGTTGCTTATCGCTTCAGGGTAGGTGGGCACA...CACATCAAGAGTCCTTATGTTATTGGGATGCAGGCAAACCTCTGTGGTCCTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR TCA 90 bp AACACTTCTCCATCTATCTCCAGAGTACACAGAGAAGGCTTTCTCAAAGCCTCCTGTGCCCACCTACCCTaGAGCGATAAGCAACACTGG +
Preference number: 4 (lower is better)
Translates to: NTSPSISRVHREGFLKASCAHLP*SDKQHW
Trigger: CCAGTGTTGCTTATCGCTTCAGGGTAGGTGGGCACA...GGAGGCTTTGAGAAAGCCTTCTCTGTGTACTCTGGAGATAGATGGAGAAGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp GCCTCTATGGGGAATGGAAGGCCTGAAAACACCCACAAATCCAGCGAGCCAGGATTGGGTTTTACAGTGTaGCTCTGTTCTTCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: ASMGNGRPENTHKSSEPGLGFTV*LCSSGE
Trigger: TTCTCCTGAAGAACAGAGGCACACTGTAAAACCCAA...TCCTGGCTCGCTGGATTTGTGGGTGTTTTCAGGCCTTCCATTCCCCATAGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp GGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCCATGTAGGGAATATTaGACAAAACCGTCTCATCTT +
Preference number: 4 (lower is better)
Translates to: GFSVWETQCRRLEQQWCEPCREY*TKPSHL
Trigger: AAGATGAGACGGTTTTGTGCAATATTCCCTACATGG...CTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp CAGTGGTGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGCCATGTAGGGAATATTaGACAAAACCGTCTCATCTT +
Preference number: 4 (lower is better)
Translates to: QWCEHESQDSAATISAAVPCREY*TKPSHL
Trigger: AAGATGAGACGGTTTTGTGCAATATTCCCTACATGG...CACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACACCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp ACTGAGGGGGAAGTGCATTGGGGTCTGACATCTCTGTTAGTTCTCGATACCTCTTCTGAGGTGTCATTGTaGCCTTCCTCCTCCTCATCT +
Preference number: 4 (lower is better)
Translates to: TEGEVHWGLTSLLVLDTSSEVSL*PSSSSS
Trigger: AGATGAGGAGGAGGAAGGGCACAATGACACCTCAGA...AGAGGTATCGAGAACTAACAGAGATGTCAGACCCCAATGCACTTCCCCCTCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
CDS-3UTR GCA 90 bp TCTGAAGAACTGGAGGCCCAGTCATTGCCTGTGTCCCTGTCACTGTCTCCTTCTTCTTTGCTGTCATCCTaGTTTCCATCTGAGGTGTCA +
Preference number: 4 (lower is better)
Translates to: SEELEAQSLPVSLSLSPSSLLSS*FPSEVS
Trigger: TGACACCTCAGATGGAAAGCAGGATGACAGCAAAGA...AGAAGGAGACAGTGACAGGGACACAGGCAATGACTGGGCCTCCAGTTCTTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586935.5
ENST00000588897.5
CDS-3UTR GCA 90 bp CCTCATCTGAGTACTGATTCAGGGCATCGACCAACTCCAGAAAAACAGCATCACCATCGATGTTGGGTGTaGACTGAGGGGGAAGTGCAT +
Preference number: 4 (lower is better)
Translates to: PHLSTDSGHRPTPEKQHHHRCWV*TEGEVH
Trigger: ATGCACTTCCCCCTCAGTGCACACCCAACATCGATG...GTGATGCTGTTTTTCTGGAGTTGGTCGATGCCCTGAATCAGTACTCAGATGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
CDS-3UTR GCA 90 bp CCTACTGTAACACTCCCAGGCCAATCTATACCCGCCCACACCCTTTCTACTCAAGACATTGCTTGGTATTaGACTGGGTCTTACAGCGAC +
Preference number: 4 (lower is better)
Translates to: PTVTLPGQSIPAHTLSTQDIAWY*TGSYSD
Trigger: GTCGCTGTAAGACCCAGTGCAATACCAAGCAATGTC...TTGAGTAGAAAGGGTGTGGGCGGGTATAGATTGGCCTGGGAGTGTTACAGTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp GGGGGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTATGAATTCGTTCTTCTaGACAGACTCCTTTATGAAG +
Preference number: 4 (lower is better)
Translates to: GGFSVWETQCRRLEQQWCMNSFF*TDSFMK
Trigger: CTTCATAAAGGAGTCTGTGCAGAAGAACGAATTCAT...ACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp GGGGGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTAAGAAATGGTTAAAGTaGTTTGCTCTGCATGAATGC +
Preference number: 4 (lower is better)
Translates to: GGFSVWETQCRRLEQQWCKKWLK*FALHEC
Trigger: GCATTCATGCAGAGCAAAGCACTTTAACCATTTCTT...ACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp GGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGAGGGTATCCCTGATATaGACAATGAATACAAACCAC +
Preference number: 4 (lower is better)
Translates to: GFSVWETQCRRLEQQWCERVSLI*TMNTNH
Trigger: GTGGTTTGTATTCATTGTGCATATCAGGGATACCCT...CTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp AGTGTGTGGAAGGAGTGCAGAGATTGCTCCCGCTGCACAGACTTGGCATTGGGGCAAATCCCGGGAAAATaGTCTCTATGGTACACTTTT +
Preference number: 4 (lower is better)
Translates to: SVWKECRDCSRCTDLALGQIPGK*SLWYTF
Trigger: AAAAGTGTACCATAGAGAGCATTTTCCCGGGATTTG...CCCCAATGCCAAGTCTGTGCAGCGGGAGCAATCTCTGCACTCCTTCCACACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586867.5
CDS-3UTR CCA 90 bp GAAGGGAGAAGCCTGCTCCCTACTGTAACACTCCCAGGCCAATCTATACCCGCCCTCATTAACATATGTTaGCTTGCAAATCCCGGGAAA +
Preference number: 4 (lower is better)
Translates to: EGRSLLPTVTLPGQSIPALINIC*LANPGK
Trigger: TTTCCCGGGATTTGCAAGCCAACATATGTTAATGAG...GGCGGGTATAGATTGGCCTGGGAGTGTTACAGTAGGGAGCAGGCTTCTCCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp TGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAAGCCAACTCATTAACATATGTTaGCTTGCAAATCCCGGGAAA +
Preference number: 4 (lower is better)
Translates to: WETQCRRLEQQWCEHESQLINIC*LANPGK
Trigger: TTTCCCGGGATTTGCAAGCCAACATATGTTAATGAG...TTGGCTTTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp TCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAACTCATTAACATATGTTaGCTTGCAAATCCCGGGAAA +
Preference number: 4 (lower is better)
Translates to: SVWETQCRRLEQQWCEHELINIC*LANPGK
Trigger: TTTCCCGGGATTTGCAAGCCAACATATGTTAATGAG...TTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp GAGAAGCCTGCTCCCTACTGTAACACTCCCAGGCCAATCTATACCCGCCCACACTCTCTTTCTTGTTACTaGCAGATCTTCTTTGCTGTC +
Preference number: 4 (lower is better)
Translates to: EKPAPYCNTPRPIYTRPHSLSCY*QIFFAV
Trigger: GACAGCAAAGAAGATCTGCCAGTAACAAGAAAGAGA...GTGTGGGCGGGTATAGATTGGCCTGGGAGTGTTACAGTAGGGAGCAGGCTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp GGCAGCTGGGTCAGGAGGAACCCCACTTCTTCCTTCATGGGACAACAAGTGGAGTCTCTTTCTTGTTACTaGCAGATCTTCTTTGCTGTC +
Preference number: 4 (lower is better)
Translates to: GSWVRRNPTSSFMGQQVESLSCY*QIFFAV
Trigger: GACAGCAAAGAAGATCTGCCAGTAACAAGAAAGAGA...CTCCACTTGTTGTCCCATGAAGGAAGAAGTGGGGTTCCTCCTGACCCAGCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp CAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAATCTCTTTCTTGTTACTaGCAGATCTTCTTTGCTGTC +
Preference number: 4 (lower is better)
Translates to: QCGRHSAGDSSSSGVSTKSLSCY*QIFFAV
Trigger: GACAGCAAAGAAGATCTGCCAGTAACAAGAAAGAGA...TTTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp TTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACTCTCTTTCTTGTTACTaGCAGATCTTCTTTGCTGTC +
Preference number: 4 (lower is better)
Translates to: FSVWETQCRRLEQQWCEHSLSCY*QIFFAV
Trigger: GACAGCAAAGAAGATCTGCCAGTAACAAGAAAGAGA...GTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp GGGGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGGAAGATCATGTCATTTaGGAACTGTTTCTTGGAACT +
Preference number: 4 (lower is better)
Translates to: GVSQCGRHSAGDSSSSGVEDHVI*ELFLGT
Trigger: AGTTCCAAGAAACAGTTCCCAAATGACATGATCTTC...CACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp TCACGCATAAGTCATCCACCCCAGCCTGTGCTCGCTTCTTCTGAGGCCAGAGAATTCTTAAGTCCACGCTaGATGCTGCAGTTTTTACAG +
Preference number: 4 (lower is better)
Translates to: SRISHPPQPVLASSEAREFLSPR*MLQFLQ
Trigger: CTGTAAAAACTGCAGCATCCAGCGTGGACTTAAGAA...TTCTCTGGCCTCAGAAGAAGCGAGCACAGGCTGGGGTGGATGACTTATGCGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp CTGTCTCCCCTCTCATTGAGACAGTTTTGTGCCCTCTGGACATGGCAGAGGCCTTTCTTAAGTCCACGCTaGATGCTGCAGTTTTTACAG +
Preference number: 4 (lower is better)
Translates to: LSPLSLRQFCALWTWQRPFLSPR*MLQFLQ
Trigger: CTGTAAAAACTGCAGCATCCAGCGTGGACTTAAGAA...AGGCCTCTGCCATGTCCAGAGGGCACAAAACTGTCTCAATGAGAGGGGAGACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000592743.5
CDS-3UTR CCA 90 bp TGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTCTTTGGCATAACAGTTaGGATTCACTGAATGATTTG +
Preference number: 4 (lower is better)
Translates to: CEHESQDSAATISAAVGPLWHNS*DSLNDL
Trigger: CAAATCATTCAGTGAATCCCAACTGTTATGCCAAAG...AGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp CCTACTGTAACACTCCCAGGCCAATCTATACCCGCCCACACCCTTTCTACTCAAAAGATCCCAATCCGATaGTCTCCATTCACCATGACC +
Preference number: 4 (lower is better)
Translates to: PTVTLPGQSIPAHTLSTQKIPIR*SPFTMT
Trigger: GGTCATGGTGAATGGAGACCATCGGATTGGGATCTT...TTGAGTAGAAAGGGTGTGGGCGGGTATAGATTGGCCTGGGAGTGTTACAGTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp AACACTTCTCCATCTATCTCCAGAGTACACAGAGAAGGCTTTCTCAAAGCCTCCAGCAACACTGGCCATTaGGCCTTGCCTCTATGGGGA +
Preference number: 4 (lower is better)
Translates to: NTSPSISRVHREGFLKASSNTGH*ALPLWG
Trigger: TCCCCATAGAGGCAAGGCCCAATGGCCAGTGTTGCT...GGAGGCTTTGAGAAAGCCTTCTCTGTGTACTCTGGAGATAGATGGAGAAGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp TTGAGACCCATCTTTAAAAGTGGGGGACAGCAGGGACAAAGGATGGGAAACTGGCCACTTCTTCCTTCATaGGACAACAAGTGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: LRPIFKSGGQQGQRMGNWPLLPS*DNKWSG
Trigger: CCCACTCCACTTGTTGTCCCATGAAGGAAGAAGTGG...CCAGTTTCCCATCCTTTGTCCCTGCTGTCCCCCACTTTTAAAGATGGGTCTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp TTTCCAAACAGCAGGCACTACAGACAGGAAAGCAGATTACACCAATCTTTCTCCTCTGTCAGGAGTTGCTaGGTGCGGGGTACGTGTGTG +
Preference number: 4 (lower is better)
Translates to: FPNSRHYRQESRLHQSFSSVRSC*VRGTCV
Trigger: CACACACGTACCCCGCACCCAGCAACTCCTGACAGA...GGAGAAAGATTGGTGTAATCTGCTTTCCTGTCTGTAGTGCCTGCTGTTTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR TCA 90 bp ACTGAGGGGGAAGTGCATTGGGGTCTGACATCTCTGTTAGTTCTCGATACCTCTGCACCCATATTTGCCTaGAGCCGTTTAAGTTGTCGA +
Preference number: 4 (lower is better)
Translates to: TEGEVHWGLTSLLVLDTSAPIFA*SRLSCR
Trigger: TCGACAACTTAAACGGCTTCAGGCAAATATGGGTGC...AGAGGTATCGAGAACTAACAGAGATGTCAGACCCCAATGCACTTCCCCCTCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
CDS-3UTR TCA 90 bp CATAATGCTTGCCTGCAGCTGCTAAGCCAGAACTTTGGAGGAGCTGGAGCACTGTGGTTTTCTCCTCTATaGGTAATTTGGAACCCACAG +
Preference number: 4 (lower is better)
Translates to: HNACLQLLSQNFGGAGALWFSPL*VIWNPQ
Trigger: CTGTGGGTTCCAAATTACTCATAGAGGAGAAAACCA...CAGTGCTCCAGCTCCTCCAAAGTTCTGGCTTAGCAGCTGCAGGCAAGCATTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp AAAGTGTGTGGAAGGAGTGCAGAGATTGCTCCCGCTGCACAGACTTGGCATTGGCTTTGCACCCATATTTaGCTGAAGCCGTTTAAGTTG +
Preference number: 4 (lower is better)
Translates to: KVCGRSAEIAPAAQTWHWLCTHI*LKPFKL
Trigger: CAACTTAAACGGCTTCAGGCAAATATGGGTGCAAAG...CCAATGCCAAGTCTGTGCAGCGGGAGCAATCTCTGCACTCCTTCCACACACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
CDS-3UTR GCA 90 bp CCTACTGTAACACTCCCAGGCCAATCTATACCCGCCCACACCCTTTCTACTCAACTGGCAGATCTTCTTTaGTGTCATCCTGCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: PTVTLPGQSIPAHTLSTQLADLL*CHPAFH
Trigger: ATGGAAAGCAGGATGACAGCAAAGAAGATCTGCCAG...TTGAGTAGAAAGGGTGTGGGCGGGTATAGATTGGCCTGGGAGTGTTACAGTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp ACCTGCTTGCACGTCTTGGTCCCCAGAAGCCTGGCTATTGAACAGAAGTTGTTGCTGGCAGATCTTCTTTaGTGTCATCCTGCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: TCLHVLVPRSLAIEQKLLLADLL*CHPAFH
Trigger: ATGGAAAGCAGGATGACAGCAAAGAAGATCTGCCAG...CAACAACTTCTGTTCAATAGCCAGGCTTCTGGGGACCAAGACGTGCAAGCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588897.5
CDS-3UTR GCA 90 bp TTGAGACCCATCTTTAAAAGTGGGGGACAGCAGGGACAAAGGATGGGAAACTGGGTCCACGCTGGATGCTaGAGTTTTTACAGGAAACCA +
Preference number: 4 (lower is better)
Translates to: LRPIFKSGGQQGQRMGNWVHAGC*SFYRKP
Trigger: TGGTTTCCTGTAAAAACTGCAGCATCCAGCGTGGAC...CCAGTTTCCCATCCTTTGTCCCTGCTGTCCCCCACTTTTAAAGATGGGTCTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp CAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAAATGAATTCGTTCTTCTaGACAGACTCCTTTATGAAG +
Preference number: 4 (lower is better)
Translates to: QCGRHSAGDSSSSGVSTKMNSFF*TDSFMK
Trigger: CTTCATAAAGGAGTCTGTGCAGAAGAACGAATTCAT...TTTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp TGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAAGCCAAATGAATTCGTTCTTCTaGACAGACTCCTTTATGAAG +
Preference number: 4 (lower is better)
Translates to: WETQCRRLEQQWCEHESQMNSFF*TDSFMK
Trigger: CTTCATAAAGGAGTCTGTGCAGAAGAACGAATTCAT...TTGGCTTTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp TTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACATGAATTCGTTCTTCTaGACAGACTCCTTTATGAAG +
Preference number: 4 (lower is better)
Translates to: FSVWETQCRRLEQQWCEHMNSFF*TDSFMK
Trigger: CTTCATAAAGGAGTCTGTGCAGAAGAACGAATTCAT...GTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR GCA 90 bp AACACTTCTCCATCTATCTCCAGAGTACACAGAGAAGGCTTTCTCAAAGCCTCCTTTCAGTTTGAGCCCTaGCACGAGGGAGGAGGTAGT +
Preference number: 4 (lower is better)
Translates to: NTSPSISRVHREGFLKASFQFEP*HEGGGS
Trigger: ACTACCTCCTCCCTCGTGGCAGGGCTCAAACTGAAA...GGAGGCTTTGAGAAAGCCTTCTCTGTGTACTCTGGAGATAGATGGAGAAGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp TCACGCATAAGTCATCCACCCCAGCCTGTGCTCGCTTCTTCTGAGGCCAGAGAAGGAAAATGCTCTCTATaGTACAAGGCTTCATTGACT +
Preference number: 4 (lower is better)
Translates to: SRISHPPQPVLASSEAREGKCSL*YKASLT
Trigger: AGTCAATGAAGCCTTGTACCATAGAGAGCATTTTCC...TTCTCTGGCCTCAGAAGAAGCGAGCACAGGCTGGGGTGGATGACTTATGCGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415827.6
CDS-3UTR CCA 90 bp TCTGTCTCCCCTCTCATTGAGACAGTTTTGTGCCCTCTGGACATGGCAGAGGCCCTCATTAACATATGTTaGCTTGCAAATCCCGGGAAA +
Preference number: 4 (lower is better)
Translates to: SVSPLIETVLCPLDMAEALINIC*LANPGK
Trigger: TTTCCCGGGATTTGCAAGCCAACATATGTTAATGAG...GGCCTCTGCCATGTCCAGAGGGCACAAAACTGTCTCAATGAGAGGGGAGACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000592743.5
CDS-3UTR CCA 90 bp CTGTCTCCCCTCTCATTGAGACAGTTTTGTGCCCTCTGGACATGGCAGAGGCCTTCTCTTTCTTGTTACTaGCAGATCTTCTTTGCTGTC +
Preference number: 4 (lower is better)
Translates to: LSPLSLRQFCALWTWQRPSLSCY*QIFFAV
Trigger: GACAGCAAAGAAGATCTGCCAGTAACAAGAAAGAGA...AGGCCTCTGCCATGTCCAGAGGGCACAAAACTGTCTCAATGAGAGGGGAGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000592743.5
CDS-3UTR CCA 90 bp TTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAGATCATGTCATTTaGGAACTGTTTCTTGGAACT +
Preference number: 4 (lower is better)
Translates to: FSVWETQCRRLEQQWCEHEDHVI*ELFLGT
Trigger: AGTTCCAAGAAACAGTTCCCAAATGACATGATCTTC...GTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp CAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAAGAAGATCATGTCATTTaGGAACTGTTTCTTGGAACT +
Preference number: 4 (lower is better)
Translates to: QCGRHSAGDSSSSGVSTKEDHVI*ELFLGT
Trigger: AGTTCCAAGAAACAGTTCCCAAATGACATGATCTTC...TTTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp AGGGCATCGACCAACTCCAGAAAAACAGCATCACTAATCAGAACGGATCCAGGGCTCCTTCATGTCATCTaGGACACCATTCTCAGGGAA +
Preference number: 4 (lower is better)
Translates to: RASTNSRKTASLIRTDPGLLHVI*DTILRE
Trigger: TTCCCTGAGAATGGTGTCCCAGATGACATGAAGGAG...CCCTGGATCCGTTCTGATTAGTGATGCTGTTTTTCTGGAGTTGGTCGATGCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
CDS-3UTR CCA 90 bp TTTCCAAACAGCAGGCACTACAGACAGGAAAGCAGATTACACCAATCTTTCTCCGCACAGACTTGGCATTaGGGCCATCGATGTTGGGTG +
Preference number: 4 (lower is better)
Translates to: FPNSRHYRQESRLHQSFSAQTWH*GHRCWV
Trigger: CACCCAACATCGATGGCCCCAATGCCAAGTCTGTGC...GGAGAAAGATTGGTGTAATCTGCTTTCCTGTCTGTAGTGCCTGCTGTTTGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp TTTATTGGCAATGAAGCCGCATGTATACCAGGCTCCCCTAGTCCCCACCACCTTGCAGTCTGTGCCACATaGTTCTGGTTCAATCTTGAT +
Preference number: 4 (lower is better)
Translates to: FIGNEAACIPGSPSPHHLAVCAT*FWFNLD
Trigger: ATCAAGATTGAACCAGAACCATGTGGCACAGACTGC...AAGGTGGTGGGGACTAGGGGAGCCTGGTATACATGCGGCTTCATTGCCAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp TTCTTCTGTGAGGGGTTCATGAGCTCATCTGTTGGCAGCTTCAGGATAAGTGATGGGGGTTGTGGAGCATaGCATACTCCTTTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: FFCEGFMSSSVGSFRISDGGCGA*HTPLLL
Trigger: AAGGAGCAAAGGAGTATGCCATGCTCCACAACCCCC...ATCACTTATCCTGAAGCTGCCAACAGATGAGCTCATGAACCCCTCACAGAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588239.5
ENST00000588897.5
CDS-3UTR CCA 90 bp GGGGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGTTGTACACTTGTGTaGAAGAGTTATCTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: GVSQCGRHSAGDSSSSGVSCTLV*KSYLSS
Trigger: TGAAGAAAGATAACTCTTCCACACAAGTGTACAACT...CACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp GAAGGGAGAAGCCTGCTCCCTACTGTAACACTCCCAGGCCAATCTATACCCGCCCTTTGGCATAACAGTTaGGATTCACTGAATGATTTG +
Preference number: 4 (lower is better)
Translates to: EGRSLLPTVTLPGQSIPALWHNS*DSLNDL
Trigger: CAAATCATTCAGTGAATCCCAACTGTTATGCCAAAG...GGCGGGTATAGATTGGCCTGGGAGTGTTACAGTAGGGAGCAGGCTTCTCCCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp CAGTGGTGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGCTTTGGCATAACAGTTaGGATTCACTGAATGATTTG +
Preference number: 4 (lower is better)
Translates to: QWCEHESQDSAATISAAVLWHNS*DSLNDL
Trigger: CAAATCATTCAGTGAATCCCAACTGTTATGCCAAAG...CACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACACCACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp GTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCCTTTGGCATAACAGTTaGGATTCACTGAATGATTTG +
Preference number: 4 (lower is better)
Translates to: VSQCGRHSAGDSSSSGVSLWHNS*DSLNDL
Trigger: CAAATCATTCAGTGAATCCCAACTGTTATGCCAAAG...GCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp TTCATGTCATCTGGGACACCATTCTCAGGGAACATTGAGGCAATTGCACTGAAGAGACTCGAGCAGCAGTaGTGTGAGCACGAAAGCCAA +
Preference number: 4 (lower is better)
Translates to: FMSSGTPFSGNIEAIALKRLEQQ*CEHESQ
Trigger: TTGGCTTTCGTGCTCACACCACTGCTGCTCGAGTCT...CTTCAGTGCAATTGCCTCAATGTTCCCTGAGAATGGTGTCCCAGATGACATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588897.5
CDS-3UTR CCA 90 bp CTTTGGAGGAGCTGGAGCACTGGTGTCTGTTCCCAGGAATCTGAAAACACTTCTCAGGCTAGCGCTTGTTaGGAACTGCCTAAGTTGATT +
Preference number: 4 (lower is better)
Translates to: LWRSWSTGVCSQESENTSQASAC*ELPKLI
Trigger: AATCAACTTAGGCAGTTCCCAACAAGCGCTAGCCTG...AGAAGTGTTTTCAGATTCCTGGGAACAGACACCAGTGCTCCAGCTCCTCCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
3UTR CAA 72 bp GCGGTCTGGGTGGTCGCAGGGTTGGTAGTTGTACACTaGTGTGGAAGAGTTATCTTTCTTCAGCTGAATCTT +
Preference number: 4 (lower is better)
Translates to: AVWVVAGLVVVH*CGRVIFLQLNL
Trigger: AAGATTCAGCTGAAGAAAGATAACTCTTCCACACAAGTGTACAACTACCAACCCTGCGACCACCCAGACCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588239.5
ENST00000588897.5
CDS-3UTR TCA 90 bp TTCATGTCATCTGGGACACCATTCTCAGGGAACATTGAGGCAATTGCACTGAAGTGTTTTGTGGGAGTCTaGCAGCGAGAGTTAGCCTCT +
Preference number: 4 (lower is better)
Translates to: FMSSGTPFSGNIEAIALKCFVGV*QRELAS
Trigger: AGAGGCTAACTCTCGCTGTCAGACTCCCACAAAACA...CTTCAGTGCAATTGCCTCAATGTTCCCTGAGAATGGTGTCCCAGATGACATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588897.5
CDS-3UTR TCA 90 bp AGGTGCTTCTTAAGTCCACGCTGGATGCTGCAGTTTTTACAGGAAACCACCTTGTTCTCACAGAAATTCTaGGTCATGATGCAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: RCFLSPRWMLQFLQETTLFSQKF*VMMQGQ
Trigger: CTGCCCCTGCATCATGACTCAGAATTTCTGTGAGAA...CAAGGTGGTTTCCTGTAAAAACTGCAGCATCCAGCGTGGACTTAAGAAGCACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588897.5
CDS-3UTR TCA 90 bp AGGGTTGGTAGTTGTACACTTGTGTGGAAGAGTTATCTTTCTTCAGCTGAATCTGCACAGACTCCTTTATaGAGGTGCCCCATCCGGCCA +
Preference number: 4 (lower is better)
Translates to: RVGSCTLVWKSYLSSAESAQTPL*RCPIRP
Trigger: TGGCCGGATGGGGCACCTTCATAAAGGAGTCTGTGC...AGATTCAGCTGAAGAAAGATAACTCTTCCACACAAGTGTACAACTACCAACCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588897.5
CDS-3UTR GCA 90 bp CCTACTGTAACACTCCCAGGCCAATCTATACCCGCCCACACCCTTTCTACTCAACACATACAAAGCCTTTaGACCCATATTTGCCTGAAG +
Preference number: 4 (lower is better)
Translates to: PTVTLPGQSIPAHTLSTQHIQSL*THICLK
Trigger: CTTCAGGCAAATATGGGTGCAAAGGCTTTGTATGTG...TTGAGTAGAAAGGGTGTGGGCGGGTATAGATTGGCCTGGGAGTGTTACAGTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp CTTTGGAGGAGCTGGAGCACTGGTGTCTGTTCCCAGGAATCTGAAAACACTTCTCATGGCATACTCCTTTaGTCCTTCCAGCAAAAGGAA +
Preference number: 4 (lower is better)
Translates to: LWRSWSTGVCSQESENTSHGILL*SFQQKE
Trigger: TTCCTTTTGCTGGAAGGAGCAAAGGAGTATGCCATG...AGAAGTGTTTTCAGATTCCTGGGAACAGACACCAGTGCTCCAGCTCCTCCAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp AGGTGCTTCTTAAGTCCACGCTGGATGCTGCAGTTTTTACAGGAAACCACCTTGAATCTTCCTGCAGTGTaGAGCCCACAATCTGTGCTT +
Preference number: 4 (lower is better)
Translates to: RCFLSPRWMLQFLQETTLNLPAV*SPQSVL
Trigger: AAGCACAGATTGTGGGCTGCACACTGCAGGAAGATT...CAAGGTGGTTTCCTGTAAAAACTGCAGCATCCAGCGTGGACTTAAGAAGCACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588897.5
CDS-3UTR GCA 90 bp CTTGGAGCGGGGGTTGTGGAGCATGGCATACTCCTTTGCTCCTTCCAGCAAAAGATGAATTCGTTCTTCTaGACAGACTCCTTTATGAAG +
Preference number: 4 (lower is better)
Translates to: LGAGVVEHGILLCSFQQKMNSFF*TDSFMK
Trigger: CTTCATAAAGGAGTCTGTGCAGAAGAACGAATTCAT...CTTTTGCTGGAAGGAGCAAAGGAGTATGCCATGCTCCACAACCCCCGCTCCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588897.5
CDS-3UTR GCA 90 bp TGGGTCAGGAGGAACCCCACTTCTTCCTTCATGGGACAACAAGTGGAGTGGGAACAAATCCCGGGAAAATaGTCTCTATGGTACACTTTT +
Preference number: 4 (lower is better)
Translates to: WVRRNPTSSFMGQQVEWEQIPGK*SLWYTF
Trigger: AAAAGTGTACCATAGAGAGCATTTTCCCGGGATTTG...TTCCCACTCCACTTGTTGTCCCATGAAGGAAGAAGTGGGGTTCCTCCTGACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428826.7
CDS-3UTR CCA 90 bp GGAACTCTTTTTGTTGCCTTCAATAGCATGTCGCTTTCTCTTTCTTGTTACTGGTGGGGCCATCGATGTTaGGTGTGCACTGAGGGGGAA +
Preference number: 4 (lower is better)
Translates to: GTLFVAFNSMSLSLSCYWWGHRC*VCTEGE
Trigger: TTCCCCCTCAGTGCACACCCAACATCGATGGCCCCA...CCAGTAACAAGAAAGAGAAAGCGACATGCTATTGAAGGCAACAAAAAGAGTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
CDS-3UTR CCA 90 bp GGAACTCTTTTTGTTGCCTTCAATAGCATGTCGCTTTCTCTTTCTTGTTACTGGCCCGCTGCACAGACTTaGCATTGGGGCCATCGATGT +
Preference number: 4 (lower is better)
Translates to: GTLFVAFNSMSLSLSCYWPAAQT*HWGHRC
Trigger: ACATCGATGGCCCCAATGCCAAGTCTGTGCAGCGGG...CCAGTAACAAGAAAGAGAAAGCGACATGCTATTGAAGGCAACAAAAAGAGTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
CDS-3UTR CCA 90 bp GCCTGGGACAGGTGGTCTACCTGCTTCTTCTCCCACTTCAGATACCCTCTGCCAAGTTGTACACTTGTGTaGAAGAGTTATCTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: AWDRWSTCFFSHFRYPLPSCTLV*KSYLSS
Trigger: TGAAGAAAGATAACTCTTCCACACAAGTGTACAACT...TGGCAGAGGGTATCTGAAGTGGGAGAAGAAGCAGGTAGACCACCTGTCCCAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp TTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACAGTTGTACACTTGTGTaGAAGAGTTATCTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: FSVWETQCRRLEQQWCEHSCTLV*KSYLSS
Trigger: TGAAGAAAGATAACTCTTCCACACAAGTGTACAACT...GTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CCA 90 bp TTTCCAAACAGCAGGCACTACAGACAGGAAAGCAGATTACACCAATCTTTCTCCAGCGATAAGCAACACTaGCCATTGGGCCTTGCCTCT +
Preference number: 4 (lower is better)
Translates to: FPNSRHYRQESRLHQSFSSDKQH*PLGLAS
Trigger: AGAGGCAAGGCCCAATGGCCAGTGTTGCTTATCGCT...GGAGAAAGATTGGTGTAATCTGCTTTCCTGTCTGTAGTGCCTGCTGTTTGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp CTTAGGACCACAGAGGTTTGCCTGCATCCCAATAACATAAGGACTCTTGATGTGCAGGGCAGCTCTTGCTaGCCCCATTCACATGAAATT +
Preference number: 4 (lower is better)
Translates to: LRTTEVCLHPNNIRTLDVQGSSC*PHSHEI
Trigger: AATTTCATGTGAATGGGGCCAGCAAGAGCTGCCCTG...CACATCAAGAGTCCTTATGTTATTGGGATGCAGGCAAACCTCTGTGGTCCTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp CTTAGGACCACAGAGGTTTGCCTGCATCCCAATAACATAAGGACTCTTGATGTGCCACTTCTTCCTTCATaGGACAACAAGTGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: LRTTEVCLHPNNIRTLDVPLLPS*DNKWSG
Trigger: CCCACTCCACTTGTTGTCCCATGAAGGAAGAAGTGG...CACATCAAGAGTCCTTATGTTATTGGGATGCAGGCAAACCTCTGTGGTCCTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp CCTCCTCCTCATCTGAGTACTGATTCAGGGCATCGACCAACTCCAGAAAAACAGCTCATAAAGTTCTGTTaGAGAGGGGACCAGGAATAC +
Preference number: 4 (lower is better)
Translates to: PPPHLSTDSGHRPTPEKQLIKFC*RGDQEY
Trigger: GTATTCCTGGTCCCCTCTCCAACAGAACTTTATGAG...CTGTTTTTCTGGAGTTGGTCGATGCCCTGAATCAGTACTCAGATGAGGAGGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586867.5
CDS-3UTR TCA 90 bp CTTAGGACCACAGAGGTTTGCCTGCATCCCAATAACATAAGGACTCTTGATGTGTCTTTGACTGCAAACTaGAAGACCTGCTTGCACGTC +
Preference number: 4 (lower is better)
Translates to: LRTTEVCLHPNNIRTLDVSLTAN*KTCLHV
Trigger: GACGTGCAAGCAGGTCTTTCAGTTTGCAGTCAAAGA...CACATCAAGAGTCCTTATGTTATTGGGATGCAGGCAAACCTCTGTGGTCCTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR TCA 90 bp CCTACTGTAACACTCCCAGGCCAATCTATACCCGCCCACACCCTTTCTACTCAACACAGTATTCAGAAATaGATTCGTTCTTCTGCACAG +
Preference number: 4 (lower is better)
Translates to: PTVTLPGQSIPAHTLSTQHSIQK*IRSSAQ
Trigger: CTGTGCAGAAGAACGAATTCATTTCTGAATACTGTG...TTGAGTAGAAAGGGTGTGGGCGGGTATAGATTGGCCTGGGAGTGTTACAGTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp TTGAGACCCATCTTTAAAAGTGGGGGACAGCAGGGACAAAGGATGGGAAACTGGCTTTGCACCCATATTTaGCTGAAGCCGTTTAAGTTG +
Preference number: 4 (lower is better)
Translates to: LRPIFKSGGQQGQRMGNWLCTHI*LKPFKL
Trigger: CAACTTAAACGGCTTCAGGCAAATATGGGTGCAAAG...CCAGTTTCCCATCCTTTGTCCCTGCTGTCCCCCACTTTTAAAGATGGGTCTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp CCTCATCTGAGTACTGATTCAGGGCATCGACCAACTCCAGAAAAACAGCATCACTCTTTGCTGTCATCCTaGTTTCCATCTGAGGTGTCA +
Preference number: 4 (lower is better)
Translates to: PHLSTDSGHRPTPEKQHHSLLSS*FPSEVS
Trigger: TGACACCTCAGATGGAAAGCAGGATGACAGCAAAGA...GTGATGCTGTTTTTCTGGAGTTGGTCGATGCCCTGAATCAGTACTCAGATGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
CDS-3UTR CCA 90 bp CATAATGCTTGCCTGCAGCTGCTAAGCCAGAACTTTGGAGGAGCTGGAGCACTGGAAGATCATGTCATTTaGGAACTGTTTCTTGGAACT +
Preference number: 4 (lower is better)
Translates to: HNACLQLLSQNFGGAGALEDHVI*ELFLGT
Trigger: AGTTCCAAGAAACAGTTCCCAAATGACATGATCTTC...CAGTGCTCCAGCTCCTCCAAAGTTCTGGCTTAGCAGCTGCAGGCAAGCATTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp TTTCCAAACAGCAGGCACTACAGACAGGAAAGCAGATTACACCAATCTTTCTCCGAGGGGGAAGTGCATTaGGGTCTGACATCTCTGTTA +
Preference number: 4 (lower is better)
Translates to: FPNSRHYRQESRLHQSFSEGEVH*GLTSLL
Trigger: TAACAGAGATGTCAGACCCCAATGCACTTCCCCCTC...GGAGAAAGATTGGTGTAATCTGCTTTCCTGTCTGTAGTGCCTGCTGTTTGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp AGGGTTGGTAGTTGTACACTTGTGTGGAAGAGTTATCTTTCTTCAGCTGAATCTGCACAGACTTGGCATTaGGGCCATCGATGTTGGGTG +
Preference number: 4 (lower is better)
Translates to: RVGSCTLVWKSYLSSAESAQTWH*GHRCWV
Trigger: CACCCAACATCGATGGCCCCAATGCCAAGTCTGTGC...AGATTCAGCTGAAGAAAGATAACTCTTCCACACAAGTGTACAACTACCAACCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588897.5
CDS-3UTR CCA 90 bp TGGAGCGGGGGTTGTGGAGCATGGCATACTCCTTTGCTCCTTCCAGCAAAAGGAAGTTGTACACTTGTGTaGAAGAGTTATCTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: WSGGCGAWHTPLLLPAKGSCTLV*KSYLSS
Trigger: TGAAGAAAGATAACTCTTCCACACAAGTGTACAACT...TCCTTTTGCTGGAAGGAGCAAAGGAGTATGCCATGCTCCACAACCCCCGCTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588239.5
ENST00000588897.5
CDS-3UTR GCA 90 bp CCTCATCTGAGTACTGATTCAGGGCATCGACCAACTCCAGAAAAACAGCATCACTTGGGTTTTACAGTGTaGCTCTGTTCTTCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: PHLSTDSGHRPTPEKQHHLGFTV*LCSSGE
Trigger: TTCTCCTGAAGAACAGAGGCACACTGTAAAACCCAA...GTGATGCTGTTTTTCTGGAGTTGGTCGATGCCCTGAATCAGTACTCAGATGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
CDS-3UTR GCA 90 bp AGGTGCTTCTTAAGTCCACGCTGGATGCTGCAGTTTTTACAGGAAACCACCTTGTTGGGTTTTACAGTGTaGCTCTGTTCTTCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: RCFLSPRWMLQFLQETTLLGFTV*LCSSGE
Trigger: TTCTCCTGAAGAACAGAGGCACACTGTAAAACCCAA...CAAGGTGGTTTCCTGTAAAAACTGCAGCATCCAGCGTGGACTTAAGAAGCACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588897.5
CDS-3UTR GCA 90 bp GATCATGTCATTTGGGAACTGTTTCTTGGAACTCTTTTTGTTGCCTTCAATAGCAGAGATTGCTCCCGCTaGACAGACTTGGCATTGGGG +
Preference number: 4 (lower is better)
Translates to: DHVIWELFLGTLFVAFNSRDCSR*TDLALG
Trigger: CCCCAATGCCAAGTCTGTGCAGCGGGAGCAATCTCT...GCTATTGAAGGCAACAAAAAGAGTTCCAAGAAACAGTTCCCAAATGACATGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
CDS-3UTR GCA 90 bp TCTGGGACACCATTCTCAGGGAACATTGAGGCAATTGCACTGAAGATCATGTCACATGGCATACTCCTTTaGTCCTTCCAGCAAAAGGAA +
Preference number: 4 (lower is better)
Translates to: SGTPFSGNIEAIALKIMSHGILL*SFQQKE
Trigger: TTCCTTTTGCTGGAAGGAGCAAAGGAGTATGCCATG...TGACATGATCTTCAGTGCAATTGCCTCAATGTTCCCTGAGAATGGTGTCCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588897.5
CDS-3UTR CCA 90 bp AACACTTCTCCATCTATCTCCAGAGTACACAGAGAAGGCTTTCTCAAAGCCTCCGGAGGTAGGGGGATTTaGTATTTCCATCTTGCTGTA +
Preference number: 4 (lower is better)
Translates to: NTSPSISRVHREGFLKASGGRGI*YFHLAV
Trigger: TACAGCAAGATGGAAATACCAAATCCCCCTACCTCC...GGAGGCTTTGAGAAAGCCTTCTCTGTGTACTCTGGAGATAGATGGAGAAGTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp TTTCCAAACAGCAGGCACTACAGACAGGAAAGCAGATTACACCAATCTTTCTCCCTCCTTCATGTCATCTaGGACACCATTCTCAGGGAA +
Preference number: 4 (lower is better)
Translates to: FPNSRHYRQESRLHQSFSLLHVI*DTILRE
Trigger: TTCCCTGAGAATGGTGTCCCAGATGACATGAAGGAG...GGAGAAAGATTGGTGTAATCTGCTTTCCTGTCTGTAGTGCCTGCTGTTTGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp CTGAAGATCATGTCATTTGGGAACTGTTTCTTGGAACTCTTTTTGTTGCCTTCAGAAGCACTGACTATGTaGTGCCTTCTCCGGCGACGA +
Preference number: 4 (lower is better)
Translates to: LKIMSFGNCFLELFLLPSEALTM*CLLRRR
Trigger: TCGTCGCCGGAGAAGGCACCACATAGTCAGTGCTTC...TGAAGGCAACAAAAAGAGTTCCAAGAAACAGTTCCCAAATGACATGATCTTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588897.5
CDS-3UTR CCA 90 bp TCCAGCAAAAGGAAGCAGTCTGTGCCACATGGTTCTGGTTCAATCTTGATTTCTACGATTCTGACAGTCTaGGTTGCACTGGCAGAACTT +
Preference number: 4 (lower is better)
Translates to: SSKRKQSVPHGSGSILISTILTV*VALAEL
Trigger: AAGTTCTGCCAGTGCAACCCAGACTGTCAGAATCGT...AGAAATCAAGATTGAACCAGAACCATGTGGCACAGACTGCTTCCTTTTGCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588897.5
CDS-3UTR TCA 90 bp TTCATGTCATCTGGGACACCATTCTCAGGGAACATTGAGGCAATTGCACTGAAGATTCTCAGGGAACATTaGGGCAATTGCACTGAAGAT +
Preference number: 4 (lower is better)
Translates to: FMSSGTPFSGNIEAIALKILREH*GNCTED
Trigger: ATCTTCAGTGCAATTGCCTCAATGTTCCCTGAGAAT...CTTCAGTGCAATTGCCTCAATGTTCCCTGAGAATGGTGTCCCAGATGACATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
CDS-3UTR TCA 90 bp CTTAGGACCACAGAGGTTTGCCTGCATCCCAATAACATAAGGACTCTTGATGTGTTGAACAGAAGTTGTTaGAGTAGGTGCCATGGAAGA +
Preference number: 4 (lower is better)
Translates to: LRTTEVCLHPNNIRTLDVLNRSC*SRCHGR
Trigger: TCTTCCATGGCACCTACTTCAACAACTTCTGTTCAA...CACATCAAGAGTCCTTATGTTATTGGGATGCAGGCAAACCTCTGTGGTCCTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR TCA 90 bp AACACTTCTCCATCTATCTCCAGAGTACACAGAGAAGGCTTTCTCAAAGCCTCCTGGTTTTCTCCTCTATaGGTAATTTGGAACCCACAG +
Preference number: 4 (lower is better)
Translates to: NTSPSISRVHREGFLKASWFSPL*VIWNPQ
Trigger: CTGTGGGTTCCAAATTACTCATAGAGGAGAAAACCA...GGAGGCTTTGAGAAAGCCTTCTCTGTGTACTCTGGAGATAGATGGAGAAGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR TCA 90 bp AACACTTCTCCATCTATCTCCAGAGTACACAGAGAAGGCTTTCTCAAAGCCTCCGAAATTTATTGGCAATaGAGCCGCATGTATACCAGG +
Preference number: 4 (lower is better)
Translates to: NTSPSISRVHREGFLKASEIYWQ*SRMYTR
Trigger: CCTGGTATACATGCGGCTTCATTGCCAATAAATTTC...GGAGGCTTTGAGAAAGCCTTCTCTGTGTACTCTGGAGATAGATGGAGAAGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR TCA 90 bp CTTAGGACCACAGAGGTTTGCCTGCATCCCAATAACATAAGGACTCTTGATGTGGAAATTTATTGGCAATaGAGCCGCATGTATACCAGG +
Preference number: 4 (lower is better)
Translates to: LRTTEVCLHPNNIRTLDVEIYWQ*SRMYTR
Trigger: CCTGGTATACATGCGGCTTCATTGCCAATAAATTTC...CACATCAAGAGTCCTTATGTTATTGGGATGCAGGCAAACCTCTGTGGTCCTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR TCA 90 bp CTTTTTGTTGCCTTCAATAGCATGTCGCTTTCTCTTTCTTGTTACTGGCAGATCACTCACAGGCTTCATTaGCTGAACAGGTTGGACACG +
Preference number: 4 (lower is better)
Translates to: LFVAFNSMSLSLSCYWQITHRLH*LNRLDT
Trigger: CGTGTCCAACCTGTTCAGTCAATGAAGCCTGTGAGT...GATCTGCCAGTAACAAGAAAGAGAAAGCGACATGCTATTGAAGGCAACAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
CDS-3UTR GCA 90 bp AACACTTCTCCATCTATCTCCAGAGTACACAGAGAAGGCTTTCTCAAAGCCTCCTTGGGTTTTACAGTGTaGCTCTGTTCTTCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: NTSPSISRVHREGFLKASLGFTV*LCSSGE
Trigger: TTCTCCTGAAGAACAGAGGCACACTGTAAAACCCAA...GGAGGCTTTGAGAAAGCCTTCTCTGTGTACTCTGGAGATAGATGGAGAAGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR GCA 90 bp ATTACACCAATCTTTCTCCTCTCTAGTCCAAGCCTGTGCCCACCTACCCTGAAGAAGAAATGGTTAAAGTaGTTTGCTCTGCATGAATGC +
Preference number: 4 (lower is better)
Translates to: ITPIFLLSSPSLCPPTLKKKWLK*FALHEC
Trigger: GCATTCATGCAGAGCAAAGCACTTTAACCATTTCTT...CTTCAGGGTAGGTGGGCACAGGCTTGGACTAGAGAGGAGAAAGATTGGTGTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp ACTGAGGGGGAAGTGCATTGGGGTCTGACATCTCTGTTAGTTCTCGATACCTCTGAAGATCATGTCATTTaGGAACTGTTTCTTGGAACT +
Preference number: 4 (lower is better)
Translates to: TEGEVHWGLTSLLVLDTSEDHVI*ELFLGT
Trigger: AGTTCCAAGAAACAGTTCCCAAATGACATGATCTTC...AGAGGTATCGAGAACTAACAGAGATGTCAGACCCCAATGCACTTCCCCCTCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
CDS-3UTR CCA 90 bp AACACTTCTCCATCTATCTCCAGAGTACACAGAGAAGGCTTTCTCAAAGCCTCCTTCTTAAGTCCACGCTaGATGCTGCAGTTTTTACAG +
Preference number: 4 (lower is better)
Translates to: NTSPSISRVHREGFLKASFLSPR*MLQFLQ
Trigger: CTGTAAAAACTGCAGCATCCAGCGTGGACTTAAGAA...GGAGGCTTTGAGAAAGCCTTCTCTGTGTACTCTGGAGATAGATGGAGAAGTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR TCA 90 bp TTTCCAAACAGCAGGCACTACAGACAGGAAAGCAGATTACACCAATCTTTCTCCCAGCTTCAGGATAAGTaGTTCTTTGACTGCAAACTG +
Preference number: 4 (lower is better)
Translates to: FPNSRHYRQESRLHQSFSQLQDK*FFDCKL
Trigger: CAGTTTGCAGTCAAAGAATCACTTATCCTGAAGCTG...GGAGAAAGATTGGTGTAATCTGCTTTCCTGTCTGTAGTGCCTGCTGTTTGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR TCA 90 bp GGGTTGGTAGTTGTACACTTGTGTGGAAGAGTTATCTTTCTTCAGCTGAATCTTACATTAGGGGTGGCATaGAAAGCTCTCCTTCATGTC +
Preference number: 4 (lower is better)
Translates to: GLVVVHLCGRVIFLQLNLTLGVA*KALLHV
Trigger: GACATGAAGGAGAGCTTTTCATGCCACCCCTAATGT...AAGATTCAGCTGAAGAAAGATAACTCTTCCACACAAGTGTACAACTACCAACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588239.5
CDS-3UTR GCA 90 bp AACACTTCTCCATCTATCTCCAGAGTACACAGAGAAGGCTTTCTCAAAGCCTCCAGGGTATCCCTGATATaGACAATGAATACAAACCAC +
Preference number: 4 (lower is better)
Translates to: NTSPSISRVHREGFLKASRVSLI*TMNTNH
Trigger: GTGGTTTGTATTCATTGTGCATATCAGGGATACCCT...GGAGGCTTTGAGAAAGCCTTCTCTGTGTACTCTGGAGATAGATGGAGAAGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp TTCTTCTGTGAGGGGTTCATGAGCTCATCTGTTGGCAGCTTCAGGATAAGTGATTCTCTTTCTTGTTACTaGCAGATCTTCTTTGCTGTC +
Preference number: 4 (lower is better)
Translates to: FFCEGFMSSSVGSFRISDSLSCY*QIFFAV
Trigger: GACAGCAAAGAAGATCTGCCAGTAACAAGAAAGAGA...ATCACTTATCCTGAAGCTGCCAACAGATGAGCTCATGAACCCCTCACAGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588897.5
CDS-3UTR CCA 90 bp AGGGTTGGTAGTTGTACACTTGTGTGGAAGAGTTATCTTTCTTCAGCTGAATCTCTCCTTCATGTCATCTaGGACACCATTCTCAGGGAA +
Preference number: 4 (lower is better)
Translates to: RVGSCTLVWKSYLSSAESLLHVI*DTILRE
Trigger: TTCCCTGAGAATGGTGTCCCAGATGACATGAAGGAG...AGATTCAGCTGAAGAAAGATAACTCTTCCACACAAGTGTACAACTACCAACCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588239.5
ENST00000588897.5
CDS-3UTR CCA 90 bp ATTACACCAATCTTTCTCCTCTCTAGTCCAAGCCTGTGCCCACCTACCCTGAAGAGTTGTACACTTGTGTaGAAGAGTTATCTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: ITPIFLLSSPSLCPPTLKSCTLV*KSYLSS
Trigger: TGAAGAAAGATAACTCTTCCACACAAGTGTACAACT...CTTCAGGGTAGGTGGGCACAGGCTTGGACTAGAGAGGAGAAAGATTGGTGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR TCA 90 bp CTGAAGATCATGTCATTTGGGAACTGTTTCTTGGAACTCTTTTTGTTGCCTTCAGCACCCATATTTGCCTaGAGCCGTTTAAGTTGTCGA +
Preference number: 4 (lower is better)
Translates to: LKIMSFGNCFLELFLLPSAPIFA*SRLSCR
Trigger: TCGACAACTTAAACGGCTTCAGGCAAATATGGGTGC...TGAAGGCAACAAAAAGAGTTCCAAGAAACAGTTCCCAAATGACATGATCTTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
CDS-3UTR TCA 90 bp GGGAACATTGAGGCAATTGCACTGAAGATCATGTCATTTGGGAACTGTTTCTTGTTGAGGCAATTGCACTaGAGATCATGTCATTTGGGA +
Preference number: 4 (lower is better)
Translates to: GNIEAIALKIMSFGNCFLLRQLH*RSCHLG
Trigger: TCCCAAATGACATGATCTTCAGTGCAATTGCCTCAA...CAAGAAACAGTTCCCAAATGACATGATCTTCAGTGCAATTGCCTCAATGTTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
CDS-3UTR GCA 90 bp TTTCCAAACAGCAGGCACTACAGACAGGAAAGCAGATTACACCAATCTTTCTCCCCATGTAGGGAATATTaGACAAAACCGTCTCATCTT +
Preference number: 4 (lower is better)
Translates to: FPNSRHYRQESRLHQSFSPCREY*TKPSHL
Trigger: AAGATGAGACGGTTTTGTGCAATATTCCCTACATGG...GGAGAAAGATTGGTGTAATCTGCTTTCCTGTCTGTAGTGCCTGCTGTTTGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CCA 90 bp ATCATGTCATTTGGGAACTGTTTCTTGGAACTCTTTTTGTTGCCTTCAATAGCAGAGGGGGAAGTGCATTaGGGTCTGACATCTCTGTTA +
Preference number: 4 (lower is better)
Translates to: IMSFGNCFLELFLLPSIAEGEVH*GLTSLL
Trigger: TAACAGAGATGTCAGACCCCAATGCACTTCCCCCTC...TGCTATTGAAGGCAACAAAAAGAGTTCCAAGAAACAGTTCCCAAATGACATGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
CDS-3UTR CCA 90 bp GGAACTCTTTTTGTTGCCTTCAATAGCATGTCGCTTTCTCTTTCTTGTTACTGGGCAGTCTGTGCCACATaGTTCTGGTTCAATCTTGAT +
Preference number: 4 (lower is better)
Translates to: GTLFVAFNSMSLSLSCYWAVCAT*FWFNLD
Trigger: ATCAAGATTGAACCAGAACCATGTGGCACAGACTGC...CCAGTAACAAGAAAGAGAAAGCGACATGCTATTGAAGGCAACAAAAAGAGTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
CDS-3UTR TCA 90 bp CTCTTTTTGTTGCCTTCAATAGCATGTCGCTTTCTCTTTCTTGTTACTGGCAGACTATGGTACACTTTTTaGGAAAAGGGTGTCCACTCA +
Preference number: 4 (lower is better)
Translates to: LFLLPSIACRFLFLVTGRLWYTF*EKGVHS
Trigger: TGAGTGGACACCCTTTTCTCAAAAAGTGTACCATAG...TCTGCCAGTAACAAGAAAGAGAAAGCGACATGCTATTGAAGGCAACAAAAAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000586867.5
CDS-3UTR GCA 90 bp ATCATGTCATTTGGGAACTGTTTCTTGGAACTCTTTTTGTTGCCTTCAATAGCACTGGCAGATCTTCTTTaGTGTCATCCTGCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: IMSFGNCFLELFLLPSIALADLL*CHPAFH
Trigger: ATGGAAAGCAGGATGACAGCAAAGAAGATCTGCCAG...TGCTATTGAAGGCAACAAAAAGAGTTCCAAGAAACAGTTCCCAAATGACATGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
3UTR CAA 72 bp ATTGCACTGAAGATCATGTCATTTGGGAACTGTTTCTaGGAACTCTTTTTGTTGCCTTCAATAGCATGTCGC +
Preference number: 4 (lower is better)
Translates to: IALKIMSFGNCF*ELFLLPSIACR
Trigger: GCGACATGCTATTGAAGGCAACAAAAAGAGTTCCAAGAAACAGTTCCCAAATGACATGATCTTCAGTGCAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
CDS-3UTR TCA 90 bp ATCATGTCATTTGGGAACTGTTTCTTGGAACTCTTTTTGTTGCCTTCAATAGCATTGAGGCAATTGCACTaGAGATCATGTCATTTGGGA +
Preference number: 4 (lower is better)
Translates to: IMSFGNCFLELFLLPSIALRQLH*RSCHLG
Trigger: TCCCAAATGACATGATCTTCAGTGCAATTGCCTCAA...TGCTATTGAAGGCAACAAAAAGAGTTCCAAGAAACAGTTCCCAAATGACATGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
CDS-3UTR CCA 90 bp GATCATGTCATTTGGGAACTGTTTCTTGGAACTCTTTTTGTTGCCTTCAATAGCCTCATTAACATATGTTaGCTTGCAAATCCCGGGAAA +
Preference number: 4 (lower is better)
Translates to: DHVIWELFLGTLFVAFNSLINIC*LANPGK
Trigger: TTTCCCGGGATTTGCAAGCCAACATATGTTAATGAG...GCTATTGAAGGCAACAAAAAGAGTTCCAAGAAACAGTTCCCAAATGACATGATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586867.5
CDS-3UTR CCA 90 bp CTCTTTTTGTTGCCTTCAATAGCATGTCGCTTTCTCTTTCTTGTTACTGGCAGACTTTGGCATAACAGTTaGGATTCACTGAATGATTTG +
Preference number: 4 (lower is better)
Translates to: LFLLPSIACRFLFLVTGRLWHNS*DSLNDL
Trigger: CAAATCATTCAGTGAATCCCAACTGTTATGCCAAAG...TCTGCCAGTAACAAGAAAGAGAAAGCGACATGCTATTGAAGGCAACAAAAAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588897.5
CDS-3UTR CAA 90 bp CCCCAGTCCATTCCACAGGCTCCGAGGGTGCTTCCACTACGCAGAGTTGAGGTGCGACGACCAGAGCACTaGGAGCGGGGGTTGTGGAGC +
Preference number: 5 (lower is better)
Translates to: PQSIPQAPRVLPLRRVEVRRPEH*ERGLWS
Trigger: GCTCCACAACCCCCGCTCCAAGTGCTCTGGTCGTCG...CACCTCAACTCTGCGTAGTGGAAGCACCCTCGGAGCCTGTGGAATGGACTGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586935.5
ENST00000588239.5
ENST00000588897.5
CDS-3UTR CAA 90 bp GAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGTCCCGCTGCACAGACTaGGCATTGGGGCCATCGATG +
Preference number: 5 (lower is better)
Translates to: EHESQDSAATISAAVGPGSRCTD*ALGPSM
Trigger: CATCGATGGCCCCAATGCCAAGTCTGTGCAGCGGGA...CCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp CTTCAGATACCCTCTGCCAGTGTGCCCTGCACACGGGGTGCCAGCCTAAACGCGCACTTGGAGCGGGGGTaGTGGAGCATGGCATACTCC +
Preference number: 5 (lower is better)
Translates to: LQIPSASVPCTRGASLNAHLERG*WSMAYS
Trigger: GGAGTATGCCATGCTCCACAACCCCCGCTCCAAGTG...CGCGTTTAGGCTGGCACCCCGTGTGCAGGGCACACTGGCAGAGGGTATCTGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CAA 90 bp CACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGAGGCACTTGGAGCGGGGGTaGTGGAGCATGGCATACTCC +
Preference number: 5 (lower is better)
Translates to: HESQDSAATISAAVGPGRHLERG*WSMAYS
Trigger: GGAGTATGCCATGCTCCACAACCCCCGCTCCAAGTG...CCTCCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp CTTCTCCGGCGACGACCAGAGCACTTGGAGCGGGGGTTGTGGAGCATGGCATACACCTGCTTGCACGTCTaGGTCCCCAGAAGCCTGGCT +
Preference number: 5 (lower is better)
Translates to: LLRRRPEHLERGLWSMAYTCLHV*VPRSLA
Trigger: AGCCAGGCTTCTGGGGACCAAGACGTGCAAGCAGGT...GTATGCCATGCTCCACAACCCCCGCTCCAAGTGCTCTGGTCGTCGCCGGAGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588239.5
ENST00000588897.5
CDS-3UTR CAA 90 bp CTTCAGATACCCTCTGCCAGTGTGCCCTGCACACGGGGTGCCAGCCTAAACGCGGCTTTCTGTCAGGAGTaGCTGGGTGCGGGGTACGTG +
Preference number: 5 (lower is better)
Translates to: LQIPSASVPCTRGASLNAAFCQE*LGAGYV
Trigger: CACGTACCCCGCACCCAGCAACTCCTGACAGAAAGC...CGCGTTTAGGCTGGCACCCCGTGTGCAGGGCACACTGGCAGAGGGTATCTGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CAA 90 bp TTCTGTCAGGAGTTGCTGGGTGCGGGGTACGTGTGTGCCCTCCAGTGTGGTGAGTGGGGCCTGGCCCATTaGGGTGGGAGGAGCTTTCTG +
Preference number: 5 (lower is better)
Translates to: FCQELLGAGYVCALQCGEWGLAH*GGRSFL
Trigger: CAGAAAGCTCCTCCCACCCAAATGGGCCAGGCCCCA...CTCACCACACTGGAGGGCACACACGTACCCCGCACCCAGCAACTCCTGACAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CAA 90 bp CAGCCCCAGTCCATTCCACAGGCTCCGAGGGTGCTTCCACTACGCAGAGTTGAGCACTTGGAGCGGGGGTaGTGGAGCATGGCATACTCC +
Preference number: 5 (lower is better)
Translates to: QPQSIPQAPRVLPLRRVEHLERG*WSMAYS
Trigger: GGAGTATGCCATGCTCCACAACCCCCGCTCCAAGTG...CTCAACTCTGCGTAGTGGAAGCACCCTCGGAGCCTGTGGAATGGACTGGGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586935.5
ENST00000588239.5
ENST00000588897.5
CDS-3UTR CAA 90 bp CAGTCCATTCCACAGGCTCCGAGGGTGCTTCCACTACGCAGAGTTGAGGTGGGGCACTTGGAGCGGGGGTaGTGGAGCATGGCATACTCC +
Preference number: 5 (lower is better)
Translates to: QSIPQAPRVLPLRRVEVGHLERG*WSMAYS
Trigger: GGAGTATGCCATGCTCCACAACCCCCGCTCCAAGTG...CCCCACCTCAACTCTGCGTAGTGGAAGCACCCTCGGAGCCTGTGGAATGGACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586935.5
ENST00000588239.5
ENST00000588897.5
CDS-3UTR CAA 90 bp CCTGGGACAGGTGGTCTACCTGCTTCTTCTCCCACTTCAGATACCCTCTGCCAGCGACGACCAGAGCACTaGGAGCGGGGGTTGTGGAGC +
Preference number: 5 (lower is better)
Translates to: PGTGGLPASSPTSDTLCQRRPEH*ERGLWS
Trigger: GCTCCACAACCCCCGCTCCAAGTGCTCTGGTCGTCG...CTGGCAGAGGGTATCTGAAGTGGGAGAAGAAGCAGGTAGACCACCTGTCCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CAA 90 bp TTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACCGACGACCAGAGCACTaGGAGCGGGGGTTGTGGAGC +
Preference number: 5 (lower is better)
Translates to: FSVWETQCRRLEQQWCEHRRPEH*ERGLWS
Trigger: GCTCCACAACCCCCGCTCCAAGTGCTCTGGTCGTCG...GTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp AGTGCAGAGATTGCTCCCGCTGCACAGACTTGGCATTGGGGCCATCGATGTTGGCGACGACCAGAGCACTaGGAGCGGGGGTTGTGGAGC +
Preference number: 5 (lower is better)
Translates to: SAEIAPAAQTWHWGHRCWRRPEH*ERGLWS
Trigger: GCTCCACAACCCCCGCTCCAAGTGCTCTGGTCGTCG...CCAACATCGATGGCCCCAATGCCAAGTCTGTGCAGCGGGAGCAATCTCTGCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588897.5
CDS-3UTR CAA 90 bp CAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAACGACGACCAGAGCACTaGGAGCGGGGGTTGTGGAGC +
Preference number: 5 (lower is better)
Translates to: QCGRHSAGDSSSSGVSTKRRPEH*ERGLWS
Trigger: GCTCCACAACCCCCGCTCCAAGTGCTCTGGTCGTCG...TTTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp GGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCGACGACCAGAGCACTaGGAGCGGGGGTTGTGGAGC +
Preference number: 5 (lower is better)
Translates to: GFSVWETQCRRLEQQWCERRPEH*ERGLWS
Trigger: GCTCCACAACCCCCGCTCCAAGTGCTCTGGTCGTCG...CTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp GGTGGGAGGAGCTTTCTGTCAGGAGTTGCTGGGTGCGGGGTACGTGTGTGCCCTGCAGAGGCTGAGGCATaGGAGCAGGAAGCACTGACT +
Preference number: 5 (lower is better)
Translates to: GGRSFLSGVAGCGVRVCPAEAEA*EQEALT
Trigger: AGTCAGTGCTTCCTGCTCCAATGCCTCAGCCTCTGC...AGGGCACACACGTACCCCGCACCCAGCAACTCCTGACAGAAAGCTCCTCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CAA 90 bp CACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGAGGGCAGAGGCTGAGGCATaGGAGCAGGAAGCACTGACT +
Preference number: 5 (lower is better)
Translates to: HESQDSAATISAAVGPGRAEAEA*EQEALT
Trigger: AGTCAGTGCTTCCTGCTCCAATGCCTCAGCCTCTGC...CCTCCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp CTGACTATGTGGTGCCTTCTCCGGCGACGACCAGAGCACTTGGAGCGGGGGTTGTTCCACTACGCAGAGTaGAGGTGGGGCTGGACTAGC +
Preference number: 5 (lower is better)
Translates to: LTMWCLLRRRPEHLERGLFHYAE*RWGWTS
Trigger: GCTAGTCCAGCCCCACCTCAACTCTGCGTAGTGGAA...CAACCCCCGCTCCAAGTGCTCTGGTCGTCGCCGGAGAAGGCACCACATAGTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588239.5
ENST00000588897.5
CDS-3UTR CAA 90 bp CACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGAGGTTCCACTACGCAGAGTaGAGGTGGGGCTGGACTAGC +
Preference number: 5 (lower is better)
Translates to: HESQDSAATISAAVGPGRFHYAE*RWGWTS
Trigger: GCTAGTCCAGCCCCACCTCAACTCTGCGTAGTGGAA...CCTCCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp GAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGAAGCAACACTGGCCATaGGGCCTTGCCTCTATGGGG +
Preference number: 5 (lower is better)
Translates to: EHESQDSAATISAAVGPGKQHWP*GLASMG
Trigger: CCCCATAGAGGCAAGGCCCAATGGCCAGTGTTGCTT...CCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CAA 90 bp GGTGGGAGGAGCTTTCTGTCAGGAGTTGCTGGGTGCGGGGTACGTGTGTGCCCTTCAACATACTGCTCCTaGTTCCCAGCCAGCCCGGCA +
Preference number: 5 (lower is better)
Translates to: GGRSFLSGVAGCGVRVCPSTYCS*FPASPA
Trigger: TGCCGGGCTGGCTGGGAACAAGGAGCAGTATGTTGA...AGGGCACACACGTACCCCGCACCCAGCAACTCCTGACAGAAAGCTCCTCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CAA 90 bp CACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGAGGCCATCTGAGGTGTCATaGTGCCCTTCCTCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: HESQDSAATISAAVGPGRPSEVS*CPSSSS
Trigger: TGAGGAGGAGGAAGGGCACAATGACACCTCAGATGG...CCTCCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp GAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGTGCACAGACTTGGCATaGGGGCCATCGATGTTGGGT +
Preference number: 5 (lower is better)
Translates to: EHESQDSAATISAAVGPGCTDLA*GPSMLG
Trigger: ACCCAACATCGATGGCCCCAATGCCAAGTCTGTGCA...CCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp GGGGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGTCCCGCTGCACAGACTaGGCATTGGGGCCATCGATG +
Preference number: 5 (lower is better)
Translates to: GVSQCGRHSAGDSSSSGVSRCTD*ALGPSM
Trigger: CATCGATGGCCCCAATGCCAAGTCTGTGCAGCGGGA...CACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp GGGGGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTTCCCGCTGCACAGACTaGGCATTGGGGCCATCGATG +
Preference number: 5 (lower is better)
Translates to: GGFSVWETQCRRLEQQWCSRCTD*ALGPSM
Trigger: CATCGATGGCCCCAATGCCAAGTCTGTGCAGCGGGA...ACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp TGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTCACTTGGAGCGGGGGTaGTGGAGCATGGCATACTCC +
Preference number: 5 (lower is better)
Translates to: CEHESQDSAATISAAVGPHLERG*WSMAYS
Trigger: GGAGTATGCCATGCTCCACAACCCCCGCTCCAAGTG...AGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp CTGTCTCCCCTCTCATTGAGACAGTTTTGTGCCCTCTGGACATGGCAGAGGCCTCGACGACCAGAGCACTaGGAGCGGGGGTTGTGGAGC +
Preference number: 5 (lower is better)
Translates to: LSPLSLRQFCALWTWQRPRRPEH*ERGLWS
Trigger: GCTCCACAACCCCCGCTCCAAGTGCTCTGGTCGTCG...AGGCCTCTGCCATGTCCAGAGGGCACAAAACTGTCTCAATGAGAGGGGAGACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000592743.5
CDS-3UTR CAA 90 bp CCTCTGAAGAACTGGAGGCCCAGTCATTGCCTGTGTCCCTGTCACTGTCTCCTTCGACGACCAGAGCACTaGGAGCGGGGGTTGTGGAGC +
Preference number: 5 (lower is better)
Translates to: PLKNWRPSHCLCPCHCLLRRPEH*ERGLWS
Trigger: GCTCCACAACCCCCGCTCCAAGTGCTCTGGTCGTCG...AAGGAGACAGTGACAGGGACACAGGCAATGACTGGGCCTCCAGTTCTTCAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000586935.5
ENST00000588239.5
ENST00000588897.5
CDS-3UTR CAA 90 bp CCCCAGTCCATTCCACAGGCTCCGAGGGTGCTTCCACTACGCAGAGTTGAGGTGGCAGAGGCTGAGGCATaGGAGCAGGAAGCACTGACT +
Preference number: 5 (lower is better)
Translates to: PQSIPQAPRVLPLRRVEVAEAEA*EQEALT
Trigger: AGTCAGTGCTTCCTGCTCCAATGCCTCAGCCTCTGC...CACCTCAACTCTGCGTAGTGGAAGCACCCTCGGAGCCTGTGGAATGGACTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586935.5
ENST00000588239.5
ENST00000588897.5
CDS-3UTR CAA 90 bp CTCCGAGGGTGCTTCCACTACGCAGAGTTGAGGTGGGGCTGGACTAGCCTTCTGTTCCACTACGCAGAGTaGAGGTGGGGCTGGACTAGC +
Preference number: 5 (lower is better)
Translates to: LRGCFHYAELRWGWTSLLFHYAE*RWGWTS
Trigger: GCTAGTCCAGCCCCACCTCAACTCTGCGTAGTGGAA...CAGAAGGCTAGTCCAGCCCCACCTCAACTCTGCGTAGTGGAAGCACCCTCGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586935.5
ENST00000588239.5
ENST00000588897.5
CDS-3UTR CAA 90 bp GGGGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGACCTGCTTGCACGTCTaGGTCCCCAGAAGCCTGGCT +
Preference number: 5 (lower is better)
Translates to: GVSQCGRHSAGDSSSSGVTCLHV*VPRSLA
Trigger: AGCCAGGCTTCTGGGGACCAAGACGTGCAAGCAGGT...CACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp GAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGTCGATCCCCACGTACTaGAGAGCATCAGCTTGGCTG +
Preference number: 5 (lower is better)
Translates to: EHESQDSAATISAAVGPGSIPTY*RASAWL
Trigger: CAGCCAAGCTGATGCTCTCAAGTACGTGGGGATCGA...CCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp CACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGAGGACTGGCCATTGGGCCTaGCCTCTATGGGGAATGGAA +
Preference number: 5 (lower is better)
Translates to: HESQDSAATISAAVGPGRTGHWA*PLWGME
Trigger: TTCCATTCCCCATAGAGGCAAGGCCCAATGGCCAGT...CCTCCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CAA 90 bp GAGAAGCCTGCTCCCTACTGTAACACTCCCAGGCCAATCTATACCCGCCCACACTGGGGCCTGGCCCATTaGGGTGGGAGGAGCTTTCTG +
Preference number: 5 (lower is better)
Translates to: EKPAPYCNTPRPIYTRPHWGLAH*GGRSFL
Trigger: CAGAAAGCTCCTCCCACCCAAATGGGCCAGGCCCCA...GTGTGGGCGGGTATAGATTGGCCTGGGAGTGTTACAGTAGGGAGCAGGCTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CAA 90 bp TTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACTCCCGCTGCACAGACTaGGCATTGGGGCCATCGATG +
Preference number: 5 (lower is better)
Translates to: FSVWETQCRRLEQQWCEHSRCTD*ALGPSM
Trigger: CATCGATGGCCCCAATGCCAAGTCTGTGCAGCGGGA...GTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp GGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACTTGGAGCGGGGGTaGTGGAGCATGGCATACTCC +
Preference number: 5 (lower is better)
Translates to: GFSVWETQCRRLEQQWCEHLERG*WSMAYS
Trigger: GGAGTATGCCATGCTCCACAACCCCCGCTCCAAGTG...CTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp GGGGGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTTTCCACTACGCAGAGTaGAGGTGGGGCTGGACTAGC +
Preference number: 5 (lower is better)
Translates to: GGFSVWETQCRRLEQQWCFHYAE*RWGWTS
Trigger: GCTAGTCCAGCCCCACCTCAACTCTGCGTAGTGGAA...ACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp GTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACCTGCTTGCACGTCTaGGTCCCCAGAAGCCTGGCT +
Preference number: 5 (lower is better)
Translates to: VSQCGRHSAGDSSSSGVSTCLHV*VPRSLA
Trigger: AGCCAGGCTTCTGGGGACCAAGACGTGCAAGCAGGT...GCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp TGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAAGCCAAACCTGCTTGCACGTCTaGGTCCCCAGAAGCCTGGCT +
Preference number: 5 (lower is better)
Translates to: WETQCRRLEQQWCEHESQTCLHV*VPRSLA
Trigger: AGCCAGGCTTCTGGGGACCAAGACGTGCAAGCAGGT...TTGGCTTTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp CACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGAGGTGGGTGGTCGCAGGGTaGGTAGTTGTACACTTGTGT +
Preference number: 5 (lower is better)
Translates to: HESQDSAATISAAVGPGRWVVAG*VVVHLC
Trigger: ACACAAGTGTACAACTACCAACCCTGCGACCACCCA...CCTCCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS CCA 90 bp TGGTGCCTTCTCCGGCGACGACCAGAGCACTTGGAGCGGGGGTTGTaGAGCATGGCATACTCCTTTGCTCCTTCCTTCAATAGCATGTCG +
Preference number: 5 (lower is better)
Translates to: WCLLRRRPEHLERGL*SMAYSFAPSFNSMS
Trigger: CGACATGCTATTGAAGGAAGGAGCAAAGGAGTATGCCATGCTCCACAACCCCCGCTCCAAGTGCTCTGGTCGTCGCCGGAGAAGGCACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585550.5
ENST00000586935.5
CDS-3UTR CAA 90 bp GTGCCTTCTCCGGCGACGACCAGAGCACTTGGAGCGGGGGTTGTGGAGCATGGCCTGAAGCCGTTTAAGTaGTCGAAGTCGCATGTATTC +
Preference number: 5 (lower is better)
Translates to: VPSPATTRALGAGVVEHGLKPFK*SKSHVF
Trigger: GAATACATGCGACTTCGACAACTTAAACGGCTTCAG...GCCATGCTCCACAACCCCCGCTCCAAGTGCTCTGGTCGTCGCCGGAGAAGGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588897.5
CDS-3UTR CAA 90 bp CTTCAGCCCCAGTCCATTCCACAGGCTCCGAGGGTGCTTCCACTACGCAGAGTTCCATCTGAGGTGTCATaGTGCCCTTCCTCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: LQPQSIPQAPRVLPLRRVPSEVS*CPSSSS
Trigger: TGAGGAGGAGGAAGGGCACAATGACACCTCAGATGG...AACTCTGCGTAGTGGAAGCACCCTCGGAGCCTGTGGAATGGACTGGGGCTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586935.5
ENST00000588897.5
CDS-3UTR CAA 90 bp GGGGGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTTGCACAGACTTGGCATaGGGGCCATCGATGTTGGGT +
Preference number: 5 (lower is better)
Translates to: GGFSVWETQCRRLEQQWCCTDLA*GPSMLG
Trigger: ACCCAACATCGATGGCCCCAATGCCAAGTCTGTGCA...ACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp CTGTCTCCCCTCTCATTGAGACAGTTTTGTGCCCTCTGGACATGGCAGAGGCCTTCCCGCTGCACAGACTaGGCATTGGGGCCATCGATG +
Preference number: 5 (lower is better)
Translates to: LSPLSLRQFCALWTWQRPSRCTD*ALGPSM
Trigger: CATCGATGGCCCCAATGCCAAGTCTGTGCAGCGGGA...AGGCCTCTGCCATGTCCAGAGGGCACAAAACTGTCTCAATGAGAGGGGAGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000592743.5
CDS-3UTR CAA 90 bp TGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGAAGGAGTGCAGAGATaGCTCCCGCTGCACAGACTT +
Preference number: 5 (lower is better)
Translates to: CEHESQDSAATISAAVGPEGVQR*LPLHRL
Trigger: AAGTCTGTGCAGCGGGAGCAATCTCTGCACTCCTTC...AGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp GTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCGCAGAGGCTGAGGCATaGGAGCAGGAAGCACTGACT +
Preference number: 5 (lower is better)
Translates to: VSQCGRHSAGDSSSSGVSAEAEA*EQEALT
Trigger: AGTCAGTGCTTCCTGCTCCAATGCCTCAGCCTCTGC...GCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp TTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGCAGAGGCTGAGGCATaGGAGCAGGAAGCACTGACT +
Preference number: 5 (lower is better)
Translates to: FSVWETQCRRLEQQWCEHAEAEA*EQEALT
Trigger: AGTCAGTGCTTCCTGCTCCAATGCCTCAGCCTCTGC...GTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp CAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAAGCAGAGGCTGAGGCATaGGAGCAGGAAGCACTGACT +
Preference number: 5 (lower is better)
Translates to: QCGRHSAGDSSSSGVSTKAEAEA*EQEALT
Trigger: AGTCAGTGCTTCCTGCTCCAATGCCTCAGCCTCTGC...TTTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp TTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACTTCCACTACGCAGAGTaGAGGTGGGGCTGGACTAGC +
Preference number: 5 (lower is better)
Translates to: FSVWETQCRRLEQQWCEHFHYAE*RWGWTS
Trigger: GCTAGTCCAGCCCCACCTCAACTCTGCGTAGTGGAA...GTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp CAGTGGTGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGTTCCACTACGCAGAGTaGAGGTGGGGCTGGACTAGC +
Preference number: 5 (lower is better)
Translates to: QWCEHESQDSAATISAAVFHYAE*RWGWTS
Trigger: GCTAGTCCAGCCCCACCTCAACTCTGCGTAGTGGAA...CACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACACCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp CTGTCTCCCCTCTCATTGAGACAGTTTTGTGCCCTCTGGACATGGCAGAGGCCTACCTGCTTGCACGTCTaGGTCCCCAGAAGCCTGGCT +
Preference number: 5 (lower is better)
Translates to: LSPLSLRQFCALWTWQRPTCLHV*VPRSLA
Trigger: AGCCAGGCTTCTGGGGACCAAGACGTGCAAGCAGGT...AGGCCTCTGCCATGTCCAGAGGGCACAAAACTGTCTCAATGAGAGGGGAGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000592743.5
CDS-3UTR CAA 90 bp TCTGTCTCCCCTCTCATTGAGACAGTTTTGTGCCCTCTGGACATGGCAGAGGCCACCTGCTTGCACGTCTaGGTCCCCAGAAGCCTGGCT +
Preference number: 5 (lower is better)
Translates to: SVSPLIETVLCPLDMAEATCLHV*VPRSLA
Trigger: AGCCAGGCTTCTGGGGACCAAGACGTGCAAGCAGGT...GGCCTCTGCCATGTCCAGAGGGCACAAAACTGTCTCAATGAGAGGGGAGACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000592743.5
CDS-3UTR CAA 90 bp GAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGGGACATTGCTTGGTATaGCACTGGGTCTTACAGCGA +
Preference number: 5 (lower is better)
Translates to: EHESQDSAATISAAVGPGGHCLV*HWVLQR
Trigger: TCGCTGTAAGACCCAGTGCAATACCAAGCAATGTCC...CCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp CACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGAGGGGACATTGCTTGGTATaGCACTGGGTCTTACAGCGA +
Preference number: 5 (lower is better)
Translates to: HESQDSAATISAAVGPGRGHCLV*HWVLQR
Trigger: TCGCTGTAAGACCCAGTGCAATACCAAGCAATGTCC...CCTCCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp TGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTTCGATCCCCACGTACTaGAGAGCATCAGCTTGGCTG +
Preference number: 5 (lower is better)
Translates to: CEHESQDSAATISAAVGPSIPTY*RASAWL
Trigger: CAGCCAAGCTGATGCTCTCAAGTACGTGGGGATCGA...AGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp GCCTGGGACAGGTGGTCTACCTGCTTCTTCTCCCACTTCAGATACCCTCTGCCACCACACTCTTTCAGTTaGAGCCCTGCCACGAGGGAG +
Preference number: 5 (lower is better)
Translates to: AWDRWSTCFFSHFRYPLPPHSFS*SPATRE
Trigger: CTCCCTCGTGGCAGGGCTCAAACTGAAAGAGTGTGG...TGGCAGAGGGTATCTGAAGTGGGAGAAGAAGCAGGTAGACCACCTGTCCCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CAA 90 bp CAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAAAAGCAACACTGGCCATaGGGCCTTGCCTCTATGGGG +
Preference number: 5 (lower is better)
Translates to: QCGRHSAGDSSSSGVSTKKQHWP*GLASMG
Trigger: CCCCATAGAGGCAAGGCCCAATGGCCAGTGTTGCTT...TTTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CAA 90 bp GGCAGCTGGGTCAGGAGGAACCCCACTTCTTCCTTCATGGGACAACAAGTGGAGTCAACATACTGCTCCTaGTTCCCAGCCAGCCCGGCA +
Preference number: 5 (lower is better)
Translates to: GSWVRRNPTSSFMGQQVESTYCS*FPASPA
Trigger: TGCCGGGCTGGCTGGGAACAAGGAGCAGTATGTTGA...CTCCACTTGTTGTCCCATGAAGGAAGAAGTGGGGTTCCTCCTGACCCAGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CAA 90 bp CTGTCTCCCCTCTCATTGAGACAGTTTTGTGCCCTCTGGACATGGCAGAGGCCTGCTTTCTGTCAGGAGTaGCTGGGTGCGGGGTACGTG +
Preference number: 5 (lower is better)
Translates to: LSPLSLRQFCALWTWQRPAFCQE*LGAGYV
Trigger: CACGTACCCCGCACCCAGCAACTCCTGACAGAAAGC...AGGCCTCTGCCATGTCCAGAGGGCACAAAACTGTCTCAATGAGAGGGGAGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS TCA 90 bp TCTCGCAAGTCTGGGTTGCACTGGCAGAACTTCTCACAGAAATTCTaGGTCATGATGCAGGGGCAGGTGCTGTCACAGGGGCGGTCTGGG +
Preference number: 5 (lower is better)
Translates to: SRKSGLHWQNFSQKF*VMMQGQVLSQGRSG
Trigger: CCCAGACCGCCCCTGTGACAGCACCTGCCCCTGCATCATGACTCAGAATTTCTGTGAGAAGTTCTGCCAGTGCAACCCAGACTTGCGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590783.5
CDS-3UTR CAA 90 bp TTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACCCATCTGAGGTGTCATaGTGCCCTTCCTCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: FSVWETQCRRLEQQWCEHPSEVS*CPSSSS
Trigger: TGAGGAGGAGGAAGGGCACAATGACACCTCAGATGG...GTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp CAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAACCATCTGAGGTGTCATaGTGCCCTTCCTCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: QCGRHSAGDSSSSGVSTKPSEVS*CPSSSS
Trigger: TGAGGAGGAGGAAGGGCACAATGACACCTCAGATGG...TTTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp GAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGACTGGCAGATCTTCTTaGCTGTCATCCTGCTTTCCA +
Preference number: 5 (lower is better)
Translates to: EHESQDSAATISAAVGPGTGRSS*LSSCFP
Trigger: TGGAAAGCAGGATGACAGCAAAGAAGATCTGCCAGT...CCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp CCCGCTGCACAGACTTGGCATTGGGGCCATCGATGTTGGGTGTGCACTGAGGGGACTGGCAGATCTTCTTaGCTGTCATCCTGCTTTCCA +
Preference number: 5 (lower is better)
Translates to: PAAQTWHWGHRCWVCTEGTGRSS*LSSCFP
Trigger: TGGAAAGCAGGATGACAGCAAAGAAGATCTGCCAGT...CCCCTCAGTGCACACCCAACATCGATGGCCCCAATGCCAAGTCTGTGCAGCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
CDS-3UTR CAA 90 bp GTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCTGCACAGACTTGGCATaGGGGCCATCGATGTTGGGT +
Preference number: 5 (lower is better)
Translates to: VSQCGRHSAGDSSSSGVSCTDLA*GPSMLG
Trigger: ACCCAACATCGATGGCCCCAATGCCAAGTCTGTGCA...GCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp TGGGTCAGGAGGAACCCCACTTCTTCCTTCATGGGACAACAAGTGGAGTGGGAATCCCGCTGCACAGACTaGGCATTGGGGCCATCGATG +
Preference number: 5 (lower is better)
Translates to: WVRRNPTSSFMGQQVEWESRCTD*ALGPSM
Trigger: CATCGATGGCCCCAATGCCAAGTCTGTGCAGCGGGA...TTCCCACTCCACTTGTTGTCCCATGAAGGAAGAAGTGGGGTTCCTCCTGACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CAA 90 bp TCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAGAAGGAGTGCAGAGATaGCTCCCGCTGCACAGACTT +
Preference number: 5 (lower is better)
Translates to: SVWETQCRRLEQQWCEHEEGVQR*LPLHRL
Trigger: AAGTCTGTGCAGCGGGAGCAATCTCTGCACTCCTTC...TTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp CACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGAGGCAGATAGCAAGGACATaGCTTGGTATTGCACTGGGT +
Preference number: 5 (lower is better)
Translates to: HESQDSAATISAAVGPGRQIART*LGIALG
Trigger: ACCCAGTGCAATACCAAGCAATGTCCTTGCTATCTG...CCTCCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp TCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAATCGATCCCCACGTACTaGAGAGCATCAGCTTGGCTG +
Preference number: 5 (lower is better)
Translates to: SVWETQCRRLEQQWCEHESIPTY*RASAWL
Trigger: CAGCCAAGCTGATGCTCTCAAGTACGTGGGGATCGA...TTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp CAGTGGTGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGTCGATCCCCACGTACTaGAGAGCATCAGCTTGGCTG +
Preference number: 5 (lower is better)
Translates to: QWCEHESQDSAATISAAVSIPTY*RASAWL
Trigger: CAGCCAAGCTGATGCTCTCAAGTACGTGGGGATCGA...CACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACACCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp GGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGTGGGAACTGCCTAAGTaGATTCCTGAGGCCACAGCC +
Preference number: 5 (lower is better)
Translates to: GFSVWETQCRRLEQQWCEWELPK*IPEATA
Trigger: GGCTGTGGCCTCAGGAATCAACTTAGGCAGTTCCCA...CTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS CCA 90 bp TTCTCCGGCGACGACCAGAGCACTTGGAGCGGGGGTTGTGGAGCATaGCATACTCCTTTGCTCCTTCCTTCAATAGCATGTCGCTTTCTC +
Preference number: 5 (lower is better)
Translates to: FSGDDQSTWSGGCGA*HTPLLLPSIACRFL
Trigger: GAGAAAGCGACATGCTATTGAAGGAAGGAGCAAAGGAGTATGCCATGCTCCACAACCCCCGCTCCAAGTGCTCTGGTCGTCGCCGGAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585550.5
ENST00000586935.5
CDS-3UTR CAA 90 bp CTTCAGATACCCTCTGCCAGTGTGCCCTGCACACGGGGTGCCAGCCTAAACGCGCCACATACAAAGCCTTaGCACCCATATTTGCCTGAA +
Preference number: 5 (lower is better)
Translates to: LQIPSASVPCTRGASLNAPHTKP*HPYLPE
Trigger: TTCAGGCAAATATGGGTGCAAAGGCTTTGTATGTGG...CGCGTTTAGGCTGGCACCCCGTGTGCAGGGCACACTGGCAGAGGGTATCTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CAA 90 bp CACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGAGGCCACATACAAAGCCTTaGCACCCATATTTGCCTGAA +
Preference number: 5 (lower is better)
Translates to: HESQDSAATISAAVGPGRPHTKP*HPYLPE
Trigger: TTCAGGCAAATATGGGTGCAAAGGCTTTGTATGTGG...CCTCCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000592743.5
CDS-3UTR CAA 90 bp TTCTGTCAGGAGTTGCTGGGTGCGGGGTACGTGTGTGCCCTCCAGTGTGGTGAGACTGGCAGATCTTCTTaGCTGTCATCCTGCTTTCCA +
Preference number: 5 (lower is better)
Translates to: FCQELLGAGYVCALQCGETGRSS*LSSCFP
Trigger: TGGAAAGCAGGATGACAGCAAAGAAGATCTGCCAGT...CTCACCACACTGGAGGGCACACACGTACCCCGCACCCAGCAACTCCTGACAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CAA 90 bp AGTCCATTCCACAGGCTCCGAGGGTGCTTCCACTACGCAGAGTTGAGGTGGGGCACTGGCAGATCTTCTTaGCTGTCATCCTGCTTTCCA +
Preference number: 5 (lower is better)
Translates to: SPFHRLRGCFHYAELRWGTGRSS*LSSCFP
Trigger: TGGAAAGCAGGATGACAGCAAAGAAGATCTGCCAGT...GCCCCACCTCAACTCTGCGTAGTGGAAGCACCCTCGGAGCCTGTGGAATGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586935.5
ENST00000588897.5
CDS-3UTR CAA 90 bp CCTCTGAAGAACTGGAGGCCCAGTCATTGCCTGTGTCCCTGTCACTGTCTCCTTTGCACAGACTTGGCATaGGGGCCATCGATGTTGGGT +
Preference number: 5 (lower is better)
Translates to: PLKNWRPSHCLCPCHCLLCTDLA*GPSMLG
Trigger: ACCCAACATCGATGGCCCCAATGCCAAGTCTGTGCA...AAGGAGACAGTGACAGGGACACAGGCAATGACTGGGCCTCCAGTTCTTCAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588897.5
CDS-3UTR CAA 90 bp TCTGAAGAACTGGAGGCCCAGTCATTGCCTGTGTCCCTGTCACTGTCTCCTTCTGCAGAGGCTGAGGCATaGGAGCAGGAAGCACTGACT +
Preference number: 5 (lower is better)
Translates to: SEELEAQSLPVSLSLSPSAEAEA*EQEALT
Trigger: AGTCAGTGCTTCCTGCTCCAATGCCTCAGCCTCTGC...AGAAGGAGACAGTGACAGGGACACAGGCAATGACTGGGCCTCCAGTTCTTCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586935.5
ENST00000588239.5
ENST00000588897.5
CDS-3UTR CAA 90 bp TGGGTCAGGAGGAACCCCACTTCTTCCTTCATGGGACAACAAGTGGAGTGGGAATTCCACTACGCAGAGTaGAGGTGGGGCTGGACTAGC +
Preference number: 5 (lower is better)
Translates to: WVRRNPTSSFMGQQVEWEFHYAE*RWGWTS
Trigger: GCTAGTCCAGCCCCACCTCAACTCTGCGTAGTGGAA...TTCCCACTCCACTTGTTGTCCCATGAAGGAAGAAGTGGGGTTCCTCCTGACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CAA 90 bp TCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAATGGGTGGTCGCAGGGTaGGTAGTTGTACACTTGTGT +
Preference number: 5 (lower is better)
Translates to: SVWETQCRRLEQQWCEHEWVVAG*VVVHLC
Trigger: ACACAAGTGTACAACTACCAACCCTGCGACCACCCA...TTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp TTCTGTCAGGAGTTGCTGGGTGCGGGGTACGTGTGTGCCCTCCAGTGTGGTGAGCAGATAGCAAGGACATaGCTTGGTATTGCACTGGGT +
Preference number: 5 (lower is better)
Translates to: FCQELLGAGYVCALQCGEQIART*LGIALG
Trigger: ACCCAGTGCAATACCAAGCAATGTCCTTGCTATCTG...CTCACCACACTGGAGGGCACACACGTACCCCGCACCCAGCAACTCCTGACAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CAA 90 bp CAGTCCATTCCACAGGCTCCGAGGGTGCTTCCACTACGCAGAGTTGAGGTGGGGCAGATAGCAAGGACATaGCTTGGTATTGCACTGGGT +
Preference number: 5 (lower is better)
Translates to: QSIPQAPRVLPLRRVEVGQIART*LGIALG
Trigger: ACCCAGTGCAATACCAAGCAATGTCCTTGCTATCTG...CCCCACCTCAACTCTGCGTAGTGGAAGCACCCTCGGAGCCTGTGGAATGGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588897.5
CDS-3UTR CAA 90 bp ACAAACCACGGCGGATGCAGATTTCAGGATCATGCTGGGGCCTGGCCCATTTGGCTGTCTCCCCTCTCATaGAGACAGTTTTGTGCCCTC +
Preference number: 5 (lower is better)
Translates to: TNHGGCRFQDHAGAWPIWLSPLS*RQFCAL
Trigger: GAGGGCACAAAACTGTCTCAATGAGAGGGGAGACAG...CCAAATGGGCCAGGCCCCAGCATGATCCTGAAATCTGCATCCGCCGTGGTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CAA 90 bp GTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCCTGTCTCCCCTCTCATaGAGACAGTTTTGTGCCCTC +
Preference number: 5 (lower is better)
Translates to: VSQCGRHSAGDSSSSGVSLSPLS*RQFCAL
Trigger: GAGGGCACAAAACTGTCTCAATGAGAGGGGAGACAG...GCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000592743.5
CDS-3UTR CAA 90 bp CTTCAGATACCCTCTGCCAGTGTGCCCTGCACACGGGGTGCCAGCCTAAACGCGTCCTCTATGAGTAATTaGGAACCCACAGTCCAGCTT +
Preference number: 5 (lower is better)
Translates to: LQIPSASVPCTRGASLNASSMSN*EPTVQL
Trigger: AAGCTGGACTGTGGGTTCCAAATTACTCATAGAGGA...CGCGTTTAGGCTGGCACCCCGTGTGCAGGGCACACTGGCAGAGGGTATCTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CAA 90 bp GGGGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGCACTCACAGGCTTCATaGACTGAACAGGTTGGACAC +
Preference number: 5 (lower is better)
Translates to: GVSQCGRHSAGDSSSSGVHSQAS*TEQVGH
Trigger: GTGTCCAACCTGTTCAGTCAATGAAGCCTGTGAGTG...CACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS CCA 90 bp GGGGAAGTGTTGGGTTTTACAGTGTGCCTCTGTTCTTCAGGAGAATaGCAGGACACAACAGCAGAACAGGTGTCCAGCCTCCATCCCGAG +
Preference number: 5 (lower is better)
Translates to: GEVLGFTVCLCSSGE*QDTTAEQVSSLHPE
Trigger: CTCGGGATGGAGGCTGGACACCTGTTCTGCTGTTGTGTCCTGCCATTCTCCTGAAGAACAGAGGCACACTGTAAAACCCAACACTTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000585912.5
ENST00000586382.5
ENST00000586867.5
ENST00000588897.5
ENST00000590078.5
ENST00000590082.1
ENST00000591330.5
ENST00000592492.5
CDS CCA 90 bp TGGTGTGGGGTCCTGAGGAAAGGCCTCACCTTCTTAAGTCCACGCTaGATGCTGCAGTTTTTACAGGAAACCACCTTGCAGTCCCAGTGC +
Preference number: 5 (lower is better)
Translates to: WCGVLRKGLTFLSPR*MLQFLQETTLQSQC
Trigger: GCACTGGGACTGCAAGGTGGTTTCCTGTAAAAACTGCAGCATCCAGCGTGGACTTAAGAAGGTGAGGCCTTTCCTCAGGACCCCACACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589846.1
CDS-3UTR CAA 90 bp TCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAATGCAAGGGGAAGTGTaGGGTTTTACAGTGTGCCTC +
Preference number: 5 (lower is better)
Translates to: SVWETQCRRLEQQWCEHEMQGEV*GFTVCL
Trigger: GAGGCACACTGTAAAACCCAACACTTCCCCTTGCAT...TTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
CDS-3UTR CAA 90 bp CCTGGGACAGGTGGTCTACCTGCTTCTTCTCCCACTTCAGATACCCTCTGCCAGATGCAAGGGGAAGTGTaGGGTTTTACAGTGTGCCTC +
Preference number: 5 (lower is better)
Translates to: PGTGGLPASSPTSDTLCQMQGEV*GFTVCL
Trigger: GAGGCACACTGTAAAACCCAACACTTCCCCTTGCAT...CTGGCAGAGGGTATCTGAAGTGGGAGAAGAAGCAGGTAGACCACCTGTCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CAA 90 bp CAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAAATGCAAGGGGAAGTGTaGGGTTTTACAGTGTGCCTC +
Preference number: 5 (lower is better)
Translates to: QCGRHSAGDSSSSGVSTKMQGEV*GFTVCL
Trigger: GAGGCACACTGTAAAACCCAACACTTCCCCTTGCAT...TTTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
CDS-3UTR CAA 90 bp TGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAAGCCAAATGCAAGGGGAAGTGTaGGGTTTTACAGTGTGCCTC +
Preference number: 5 (lower is better)
Translates to: WETQCRRLEQQWCEHESQMQGEV*GFTVCL
Trigger: GAGGCACACTGTAAAACCCAACACTTCCCCTTGCAT...TTGGCTTTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
CDS-3UTR CAA 90 bp TGCCAGAGAGGGTGGCACCACAGCCTGGGACAGGTGGTCTACCTGCTTCTTCTCTACCATAAAGTTCTGTaGGAGAGGGGACCAGGAATA +
Preference number: 5 (lower is better)
Translates to: CQRGWHHSLGQVVYLLLLYHKVL*ERGPGI
Trigger: TATTCCTGGTCCCCTCTCCAACAGAACTTTATGGTA...GAGAAGAAGCAGGTAGACCACCTGTCCCAGGCTGTGGTGCCACCCTCTCTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CAA 90 bp CTCCCTACTGTAACACTCCCAGGCCAATCTATACCCGCCCACACCCTTTCTACTCCATCTGAGGTGTCATaGTGCCCTTCCTCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: LPTVTLPGQSIPAHTLSTPSEVS*CPSSSS
Trigger: TGAGGAGGAGGAAGGGCACAATGACACCTCAGATGG...AGTAGAAAGGGTGTGGGCGGGTATAGATTGGCCTGGGAGTGTTACAGTAGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CAA 90 bp TGGGTCAGGAGGAACCCCACTTCTTCCTTCATGGGACAACAAGTGGAGTGGGAACCATCTGAGGTGTCATaGTGCCCTTCCTCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: WVRRNPTSSFMGQQVEWEPSEVS*CPSSSS
Trigger: TGAGGAGGAGGAAGGGCACAATGACACCTCAGATGG...TTCCCACTCCACTTGTTGTCCCATGAAGGAAGAAGTGGGGTTCCTCCTGACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CAA 90 bp CTGACTATGTGGTGCCTTCTCCGGCGACGACCAGAGCACTTGGAGCGGGGGTTGTTGGAACTCTTTTTGTaGCCTTCAATAGCATGTCGC +
Preference number: 5 (lower is better)
Translates to: LTMWCLLRRRPEHLERGLLELFL*PSIACR
Trigger: GCGACATGCTATTGAAGGCAACAAAAAGAGTTCCAA...CAACCCCCGCTCCAAGTGCTCTGGTCGTCGCCGGAGAAGGCACCACATAGTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000588239.5
ENST00000588897.5
CDS-3UTR CAA 90 bp TGGGTCAGGAGGAACCCCACTTCTTCCTTCATGGGACAACAAGTGGAGTGGGAAGAAGGAGTGCAGAGATaGCTCCCGCTGCACAGACTT +
Preference number: 5 (lower is better)
Translates to: WVRRNPTSSFMGQQVEWEEGVQR*LPLHRL
Trigger: AAGTCTGTGCAGCGGGAGCAATCTCTGCACTCCTTC...TTCCCACTCCACTTGTTGTCCCATGAAGGAAGAAGTGGGGTTCCTCCTGACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CAA 90 bp CTCCCTACTGTAACACTCCCAGGCCAATCTATACCCGCCCACACCCTTTCTACTGAAGGAGTGCAGAGATaGCTCCCGCTGCACAGACTT +
Preference number: 5 (lower is better)
Translates to: LPTVTLPGQSIPAHTLSTEGVQR*LPLHRL
Trigger: AAGTCTGTGCAGCGGGAGCAATCTCTGCACTCCTTC...AGTAGAAAGGGTGTGGGCGGGTATAGATTGGCCTGGGAGTGTTACAGTAGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CAA 90 bp ATGAATTCGTTCTTCTGCACAGACTCCTTTATGAAGGTGCCCCATCCGGCCACAACCTGCTTGCACGTCTaGGTCCCCAGAAGCCTGGCT +
Preference number: 5 (lower is better)
Translates to: MNSFFCTDSFMKVPHPATTCLHV*VPRSLA
Trigger: AGCCAGGCTTCTGGGGACCAAGACGTGCAAGCAGGT...TGTGGCCGGATGGGGCACCTTCATAAAGGAGTCTGTGCAGAAGAACGAATTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588897.5
CDS-3UTR CAA 90 bp TGGAGCGGGGGTTGTGGAGCATGGCATACTCCTTTGCTCCTTCCAGCAAAAGGATGGGTGGTCGCAGGGTaGGTAGTTGTACACTTGTGT +
Preference number: 5 (lower is better)
Translates to: WSGGCGAWHTPLLLPAKGWVVAG*VVVHLC
Trigger: ACACAAGTGTACAACTACCAACCCTGCGACCACCCA...TCCTTTTGCTGGAAGGAGCAAAGGAGTATGCCATGCTCCACAACCCCCGCTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588239.5
ENST00000588897.5
CDS-3UTR CAA 90 bp TGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAAGCCAAGGACATTGCTTGGTATaGCACTGGGTCTTACAGCGA +
Preference number: 5 (lower is better)
Translates to: WETQCRRLEQQWCEHESQGHCLV*HWVLQR
Trigger: TCGCTGTAAGACCCAGTGCAATACCAAGCAATGTCC...TTGGCTTTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp TCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAGGACATTGCTTGGTATaGCACTGGGTCTTACAGCGA +
Preference number: 5 (lower is better)
Translates to: SVWETQCRRLEQQWCEHEGHCLV*HWVLQR
Trigger: TCGCTGTAAGACCCAGTGCAATACCAAGCAATGTCC...TTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp TTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGGACATTGCTTGGTATaGCACTGGGTCTTACAGCGA +
Preference number: 5 (lower is better)
Translates to: FSVWETQCRRLEQQWCEHGHCLV*HWVLQR
Trigger: TCGCTGTAAGACCCAGTGCAATACCAAGCAATGTCC...GTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp GGGGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGCAGATAGCAAGGACATaGCTTGGTATTGCACTGGGT +
Preference number: 5 (lower is better)
Translates to: GVSQCGRHSAGDSSSSGVQIART*LGIALG
Trigger: ACCCAGTGCAATACCAAGCAATGTCCTTGCTATCTG...CACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp GAGAAGCCTGCTCCCTACTGTAACACTCCCAGGCCAATCTATACCCGCCCACACCTCATTGAGACAGTTTaGTGCCCTCTGGACATGGCA +
Preference number: 5 (lower is better)
Translates to: EKPAPYCNTPRPIYTRPHLIETV*CPLDMA
Trigger: TGCCATGTCCAGAGGGCACAAAACTGTCTCAATGAG...GTGTGGGCGGGTATAGATTGGCCTGGGAGTGTTACAGTAGGGAGCAGGCTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CAA 90 bp CAGTGGTGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGCTCATTGAGACAGTTTaGTGCCCTCTGGACATGGCA +
Preference number: 5 (lower is better)
Translates to: QWCEHESQDSAATISAAVLIETV*CPLDMA
Trigger: TGCCATGTCCAGAGGGCACAAAACTGTCTCAATGAG...CACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACACCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000592743.5
CDS-3UTR CAA 90 bp TTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACCTCATTGAGACAGTTTaGTGCCCTCTGGACATGGCA +
Preference number: 5 (lower is better)
Translates to: FSVWETQCRRLEQQWCEHLIETV*CPLDMA
Trigger: TGCCATGTCCAGAGGGCACAAAACTGTCTCAATGAG...GTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000592743.5
CDS-3UTR CAA 90 bp TGGGTCAGGAGGAACCCCACTTCTTCCTTCATGGGACAACAAGTGGAGTGGGAATGGGAACTGCCTAAGTaGATTCCTGAGGCCACAGCC +
Preference number: 5 (lower is better)
Translates to: WVRRNPTSSFMGQQVEWEWELPK*IPEATA
Trigger: GGCTGTGGCCTCAGGAATCAACTTAGGCAGTTCCCA...TTCCCACTCCACTTGTTGTCCCATGAAGGAAGAAGTGGGGTTCCTCCTGACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CAA 90 bp TTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACCACTCACAGGCTTCATaGACTGAACAGGTTGGACAC +
Preference number: 5 (lower is better)
Translates to: FSVWETQCRRLEQQWCEHHSQAS*TEQVGH
Trigger: GTGTCCAACCTGTTCAGTCAATGAAGCCTGTGAGTG...GTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp CGAGGGTGCTTCCACTACGCAGAGTTGAGGTGGGGCTGGACTAGCCTTCTGTTTCACTCACAGGCTTCATaGACTGAACAGGTTGGACAC +
Preference number: 5 (lower is better)
Translates to: RGCFHYAELRWGWTSLLFHSQAS*TEQVGH
Trigger: GTGTCCAACCTGTTCAGTCAATGAAGCCTGTGAGTG...AAACAGAAGGCTAGTCCAGCCCCACCTCAACTCTGCGTAGTGGAAGCACCCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588897.5
CDS-3UTR CAA 90 bp TGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAAGCCAACACTCACAGGCTTCATaGACTGAACAGGTTGGACAC +
Preference number: 5 (lower is better)
Translates to: WETQCRRLEQQWCEHESQHSQAS*TEQVGH
Trigger: GTGTCCAACCTGTTCAGTCAATGAAGCCTGTGAGTG...TTGGCTTTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS CCA 90 bp AATGCTTGGGACCGTTCCTTCCTTCCCCCTCCATTTTATGTGGTGTaGGGTCCTGAGGAAAGGCCTCACCTTCTTAAGTCCACGCTGGAT +
Preference number: 5 (lower is better)
Translates to: NAWDRSFLPPPFYVV*GPEERPHLLKSTLD
Trigger: ATCCAGCGTGGACTTAAGAAGGTGAGGCCTTTCCTCAGGACCCCACACCACATAAAATGGAGGGGGAAGGAAGGAACGGTCCCAAGCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589846.1
CDS-3UTR CAA 90 bp GGGGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGCTGAAGCCGTTTAAGTaGTCGAAGTCGCATGTATTC +
Preference number: 5 (lower is better)
Translates to: GVSQCGRHSAGDSSSSGVLKPFK*SKSHVF
Trigger: GAATACATGCGACTTCGACAACTTAAACGGCTTCAG...CACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000592743.5
CDS-3UTR CAA 90 bp TGGAAGGAGTGCAGAGATTGCTCCCGCTGCACAGACTTGGCATTGGGGCCATCGCTGAAGCCGTTTAAGTaGTCGAAGTCGCATGTATTC +
Preference number: 5 (lower is better)
Translates to: WKECRDCSRCTDLALGPSLKPFK*SKSHVF
Trigger: GAATACATGCGACTTCGACAACTTAAACGGCTTCAG...CGATGGCCCCAATGCCAAGTCTGTGCAGCGGGAGCAATCTCTGCACTCCTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
CDS-3UTR CAA 90 bp TGGAAGGAGTGCAGAGATTGCTCCCGCTGCACAGACTTGGCATTGGGGCCATCGCCACATACAAAGCCTTaGCACCCATATTTGCCTGAA +
Preference number: 5 (lower is better)
Translates to: WKECRDCSRCTDLALGPSPHTKP*HPYLPE
Trigger: TTCAGGCAAATATGGGTGCAAAGGCTTTGTATGTGG...CGATGGCCCCAATGCCAAGTCTGTGCAGCGGGAGCAATCTCTGCACTCCTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
CDS-3UTR CAA 90 bp TGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAAGCCAATGGTACAAGGCTTCATaGACTGAACAGGTTGGACAC +
Preference number: 5 (lower is better)
Translates to: WETQCRRLEQQWCEHESQWYKAS*TEQVGH
Trigger: GTGTCCAACCTGTTCAGTCAATGAAGCCTTGTACCA...TTGGCTTTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415827.6
CDS-3UTR CAA 90 bp GTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACTGGCAGATCTTCTTaGCTGTCATCCTGCTTTCCA +
Preference number: 5 (lower is better)
Translates to: VSQCGRHSAGDSSSSGVSTGRSS*LSSCFP
Trigger: TGGAAAGCAGGATGACAGCAAAGAAGATCTGCCAGT...GCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp CCCCAGTCCATTCCACAGGCTCCGAGGGTGCTTCCACTACGCAGAGTTGAGGTGTTGGAACTCTTTTTGTaGCCTTCAATAGCATGTCGC +
Preference number: 5 (lower is better)
Translates to: PQSIPQAPRVLPLRRVEVLELFL*PSIACR
Trigger: GCGACATGCTATTGAAGGCAACAAAAAGAGTTCCAA...CACCTCAACTCTGCGTAGTGGAAGCACCCTCGGAGCCTGTGGAATGGACTGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588239.5
ENST00000588897.5
CDS-3UTR CAA 90 bp CCTACTGTAACACTCCCAGGCCAATCTATACCCGCCCACACCCTTTCTACTCAATGCACAGACTTGGCATaGGGGCCATCGATGTTGGGT +
Preference number: 5 (lower is better)
Translates to: PTVTLPGQSIPAHTLSTQCTDLA*GPSMLG
Trigger: ACCCAACATCGATGGCCCCAATGCCAAGTCTGTGCA...TTGAGTAGAAAGGGTGTGGGCGGGTATAGATTGGCCTGGGAGTGTTACAGTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CAA 90 bp TCATCCTGCTTTCCATCTGAGGTGTCATTGTGCCCTTCCTCCTCCTCATCTGAGTGCACAGACTTGGCATaGGGGCCATCGATGTTGGGT +
Preference number: 5 (lower is better)
Translates to: SSCFPSEVSLCPSSSSSECTDLA*GPSMLG
Trigger: ACCCAACATCGATGGCCCCAATGCCAAGTCTGTGCA...CTCAGATGAGGAGGAGGAAGGGCACAATGACACCTCAGATGGAAAGCAGGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
CDS-3UTR CAA 90 bp TGGGTCAGGAGGAACCCCACTTCTTCCTTCATGGGACAACAAGTGGAGTGGGAATGGGTGGTCGCAGGGTaGGTAGTTGTACACTTGTGT +
Preference number: 5 (lower is better)
Translates to: WVRRNPTSSFMGQQVEWEWVVAG*VVVHLC
Trigger: ACACAAGTGTACAACTACCAACCCTGCGACCACCCA...TTCCCACTCCACTTGTTGTCCCATGAAGGAAGAAGTGGGGTTCCTCCTGACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CAA 90 bp TGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAAGCCAACAGATAGCAAGGACATaGCTTGGTATTGCACTGGGT +
Preference number: 5 (lower is better)
Translates to: WETQCRRLEQQWCEHESQQIART*LGIALG
Trigger: ACCCAGTGCAATACCAAGCAATGTCCTTGCTATCTG...TTGGCTTTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp TTGAGACCCATCTTTAAAAGTGGGGGACAGCAGGGACAAAGGATGGGAAACTGGCCACACTCTTTCAGTTaGAGCCCTGCCACGAGGGAG +
Preference number: 5 (lower is better)
Translates to: LRPIFKSGGQQGQRMGNWPHSFS*SPATRE
Trigger: CTCCCTCGTGGCAGGGCTCAAACTGAAAGAGTGTGG...CCAGTTTCCCATCCTTTGTCCCTGCTGTCCCCCACTTTTAAAGATGGGTCTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CAA 90 bp CCTACTGTAACACTCCCAGGCCAATCTATACCCGCCCACACCCTTTCTACTCAAACTGGCCATTGGGCCTaGCCTCTATGGGGAATGGAA +
Preference number: 5 (lower is better)
Translates to: PTVTLPGQSIPAHTLSTQTGHWA*PLWGME
Trigger: TTCCATTCCCCATAGAGGCAAGGCCCAATGGCCAGT...TTGAGTAGAAAGGGTGTGGGCGGGTATAGATTGGCCTGGGAGTGTTACAGTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CAA 90 bp GGCAGCTGGGTCAGGAGGAACCCCACTTCTTCCTTCATGGGACAACAAGTGGAGAGCCCCTCACCAACCTaGGAACATATTCTAACTCAC +
Preference number: 5 (lower is better)
Translates to: GSWVRRNPTSSFMGQQVESPSPT*EHILTH
Trigger: GTGAGTTAGAATATGTTCCAAGGTTGGTGAGGGGCT...CTCCACTTGTTGTCCCATGAAGGAAGAAGTGGGGTTCCTCCTGACCCAGCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CAA 90 bp AGTCTGTGCTGCCTGCCAGGCTCGCCTCTAACCCAGACCACTTGTAGGCTCCAGTCTATGGTACACTTTTaGAGAAAAGGGTGTCCACTC +
Preference number: 5 (lower is better)
Translates to: SLCCLPGSPLTQTTCRLQSMVHF*RKGCPL
Trigger: GAGTGGACACCCTTTTCTCAAAAAGTGTACCATAGA...CTGGAGCCTACAAGTGGTCTGGGTTAGAGGCGAGCCTGGCAGGCAGCACAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428826.7
CDS GCA 90 bp CTTGGCAAAGATCCCAATCCGATGGTCTCCATTCACCATGACCACTaGAAGCAGGATAAACCCGAGGCTAGGTTCCTACCCAACTCCAAG +
Preference number: 5 (lower is better)
Translates to: LGKDPNPMVSIHHDH*KQDKPEARFLPNSK
Trigger: CTTGGAGTTGGGTAGGAACCTAGCCTCGGGTTTATCCTGCTTGCAGTGGTCATGGTGAATGGAGACCATCGGATTGGGATCTTTGCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586714.1
CDS CCA 90 bp GGGGAAGTGTTGGGTTTTACAGTGTGCCTCTGTTCTTCAGGAGAATaGCAGGACACAACAGCAGAACAGGTGTCCAGCTGTAATCCCAGC +
Preference number: 5 (lower is better)
Translates to: GEVLGFTVCLCSSGE*QDTTAEQVSSCNPS
Trigger: GCTGGGATTACAGCTGGACACCTGTTCTGCTGTTGTGTCCTGCCATTCTCCTGAAGAACAGAGGCACACTGTAAAACCCAACACTTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593214.5
CDS-3UTR CAA 90 bp GCCTGGGACAGGTGGTCTACCTGCTTCTTCTCCCACTTCAGATACCCTCTGCCACTGAAGCCGTTTAAGTaGTCGAAGTCGCATGTATTC +
Preference number: 5 (lower is better)
Translates to: AWDRWSTCFFSHFRYPLPLKPFK*SKSHVF
Trigger: GAATACATGCGACTTCGACAACTTAAACGGCTTCAG...TGGCAGAGGGTATCTGAAGTGGGAGAAGAAGCAGGTAGACCACCTGTCCCAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CAA 90 bp CAGTGGTGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGCTGAAGCCGTTTAAGTaGTCGAAGTCGCATGTATTC +
Preference number: 5 (lower is better)
Translates to: QWCEHESQDSAATISAAVLKPFK*SKSHVF
Trigger: GAATACATGCGACTTCGACAACTTAAACGGCTTCAG...CACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACACCACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000592743.5
CDS-3UTR CAA 90 bp GTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCCCACATACAAAGCCTTaGCACCCATATTTGCCTGAA +
Preference number: 5 (lower is better)
Translates to: VSQCGRHSAGDSSSSGVSPHTKP*HPYLPE
Trigger: TTCAGGCAAATATGGGTGCAAAGGCTTTGTATGTGG...GCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000592743.5
CDS-3UTR CAA 90 bp AGTGTGTGGAAGGAGTGCAGAGATTGCTCCCGCTGCACAGACTTGGCATTGGGGCCACATACAAAGCCTTaGCACCCATATTTGCCTGAA +
Preference number: 5 (lower is better)
Translates to: SVWKECRDCSRCTDLALGPHTKP*HPYLPE
Trigger: TTCAGGCAAATATGGGTGCAAAGGCTTTGTATGTGG...CCCCAATGCCAAGTCTGTGCAGCGGGAGCAATCTCTGCACTCCTTCCACACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
CDS-3UTR CAA 90 bp GGGGGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTTTAACATATGTTGGCTaGCAAATCCCGGGAAAATGC +
Preference number: 5 (lower is better)
Translates to: GGFSVWETQCRRLEQQWCLTYVG*QIPGKC
Trigger: GCATTTTCCCGGGATTTGCAAGCCAACATATGTTAA...ACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp TGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAAGCCAATACCATAAAGTTCTGTaGGAGAGGGGACCAGGAATA +
Preference number: 5 (lower is better)
Translates to: WETQCRRLEQQWCEHESQYHKVL*ERGPGI
Trigger: TATTCCTGGTCCCCTCTCCAACAGAACTTTATGGTA...TTGGCTTTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp GTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCTACCATAAAGTTCTGTaGGAGAGGGGACCAGGAATA +
Preference number: 5 (lower is better)
Translates to: VSQCGRHSAGDSSSSGVSYHKVL*ERGPGI
Trigger: TATTCCTGGTCCCCTCTCCAACAGAACTTTATGGTA...GCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp CCTCCTCCTCATCTGAGTACTGATTCAGGGCATCGACCAACTCCAGAAAAACAGCCATCTGAGGTGTCATaGTGCCCTTCCTCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: PPPHLSTDSGHRPTPEKQPSEVS*CPSSSS
Trigger: TGAGGAGGAGGAAGGGCACAATGACACCTCAGATGG...CTGTTTTTCTGGAGTTGGTCGATGCCCTGAATCAGTACTCAGATGAGGAGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
CDS-3UTR CAA 90 bp CTGTCTCCCCTCTCATTGAGACAGTTTTGTGCCCTCTGGACATGGCAGAGGCCTACTGGCAGATCTTCTTaGCTGTCATCCTGCTTTCCA +
Preference number: 5 (lower is better)
Translates to: LSPLSLRQFCALWTWQRPTGRSS*LSSCFP
Trigger: TGGAAAGCAGGATGACAGCAAAGAAGATCTGCCAGT...AGGCCTCTGCCATGTCCAGAGGGCACAAAACTGTCTCAATGAGAGGGGAGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000592743.5
CDS-3UTR CAA 90 bp TCTGTCTCCCCTCTCATTGAGACAGTTTTGTGCCCTCTGGACATGGCAGAGGCCACTGGCAGATCTTCTTaGCTGTCATCCTGCTTTCCA +
Preference number: 5 (lower is better)
Translates to: SVSPLIETVLCPLDMAEATGRSS*LSSCFP
Trigger: TGGAAAGCAGGATGACAGCAAAGAAGATCTGCCAGT...GGCCTCTGCCATGTCCAGAGGGCACAAAACTGTCTCAATGAGAGGGGAGACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000592743.5
CDS-3UTR CAA 90 bp CTTTGGAGGAGCTGGAGCACTGGTGTCTGTTCCCAGGAATCTGAAAACACTTCTTGCACAGACTTGGCATaGGGGCCATCGATGTTGGGT +
Preference number: 5 (lower is better)
Translates to: LWRSWSTGVCSQESENTSCTDLA*GPSMLG
Trigger: ACCCAACATCGATGGCCCCAATGCCAAGTCTGTGCA...AGAAGTGTTTTCAGATTCCTGGGAACAGACACCAGTGCTCCAGCTCCTCCAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CAA 90 bp CTTAGGACCACAGAGGTTTGCCTGCATCCCAATAACATAAGGACTCTTGATGTGCACTTGGAGCGGGGGTaGTGGAGCATGGCATACTCC +
Preference number: 5 (lower is better)
Translates to: LRTTEVCLHPNNIRTLDVHLERG*WSMAYS
Trigger: GGAGTATGCCATGCTCCACAACCCCCGCTCCAAGTG...CACATCAAGAGTCCTTATGTTATTGGGATGCAGGCAAACCTCTGTGGTCCTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CAA 90 bp GAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTGGGTTGGTAGTTGTACACTaGTGTGGAAGAGTTATCTTT +
Preference number: 5 (lower is better)
Translates to: EHESQDSAATISAAVGPGLVVVH*CGRVIF
Trigger: AAAGATAACTCTTCCACACAAGTGTACAACTACCAA...CCCAGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp CATAATGCTTGCCTGCAGCTGCTAAGCCAGAACTTTGGAGGAGCTGGAGCACTGGGACATTGCTTGGTATaGCACTGGGTCTTACAGCGA +
Preference number: 5 (lower is better)
Translates to: HNACLQLLSQNFGGAGALGHCLV*HWVLQR
Trigger: TCGCTGTAAGACCCAGTGCAATACCAAGCAATGTCC...CAGTGCTCCAGCTCCTCCAAAGTTCTGGCTTAGCAGCTGCAGGCAAGCATTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CAA 90 bp CTGTCTCCCCTCTCATTGAGACAGTTTTGTGCCCTCTGGACATGGCAGAGGCCTCAGATAGCAAGGACATaGCTTGGTATTGCACTGGGT +
Preference number: 5 (lower is better)
Translates to: LSPLSLRQFCALWTWQRPQIART*LGIALG
Trigger: ACCCAGTGCAATACCAAGCAATGTCCTTGCTATCTG...AGGCCTCTGCCATGTCCAGAGGGCACAAAACTGTCTCAATGAGAGGGGAGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000592743.5
CDS-3UTR CAA 90 bp GCCTCTATGGGGAATGGAAGGCCTGAAAACACCCACAAATCCAGCGAGCCAGGAAGCCCCTCACCAACCTaGGAACATATTCTAACTCAC +
Preference number: 5 (lower is better)
Translates to: ASMGNGRPENTHKSSEPGSPSPT*EHILTH
Trigger: GTGAGTTAGAATATGTTCCAAGGTTGGTGAGGGGCT...TCCTGGCTCGCTGGATTTGTGGGTGTTTTCAGGCCTTCCATTCCCCATAGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CAA 90 bp GGGGGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTTCTATGGTACACTTTTaGAGAAAAGGGTGTCCACTC +
Preference number: 5 (lower is better)
Translates to: GGFSVWETQCRRLEQQWCSMVHF*RKGCPL
Trigger: GAGTGGACACCCTTTTCTCAAAAAGTGTACCATAGA...ACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000428826.7
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp TGGGGCTGGACTAGCCTTCTGTTTTGTGGGAGTCTGACAGCGAGAGTTAGCCTCGCATGGCATACTCCTTaGCTCCTTCCTTCAATAGCA +
Preference number: 5 (lower is better)
Translates to: WGWTSLLFCGSLTARVSLAWHTP*LLPSIA
Trigger: TGCTATTGAAGGAAGGAGCAAAGGAGTATGCCATGC...GAGGCTAACTCTCGCTGTCAGACTCCCACAAAACAGAAGGCTAGTCCAGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586935.5
CDS CCA 90 bp CATTGGGGCCATCGATGTTGGGTGTGCACTGAGGGGGAAGTGCATTaGGGTCTGACATCTCTGTTAGTTCTCGATACCTTCAATAGCATG +
Preference number: 5 (lower is better)
Translates to: HWGHRCWVCTEGEVH*GLTSLLVLDTFNSM
Trigger: CATGCTATTGAAGGTATCGAGAACTAACAGAGATGTCAGACCCCAATGCACTTCCCCCTCAGTGCACACCCAACATCGATGGCCCCAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587179.1
CDS-3UTR CAA 90 bp CTGTCTCCCCTCTCATTGAGACAGTTTTGTGCCCTCTGGACATGGCAGAGGCCTCTGAAGCCGTTTAAGTaGTCGAAGTCGCATGTATTC +
Preference number: 5 (lower is better)
Translates to: LSPLSLRQFCALWTWQRPLKPFK*SKSHVF
Trigger: GAATACATGCGACTTCGACAACTTAAACGGCTTCAG...AGGCCTCTGCCATGTCCAGAGGGCACAAAACTGTCTCAATGAGAGGGGAGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000592743.5
CDS-3UTR CAA 90 bp TGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAAGCCAATTAACATATGTTGGCTaGCAAATCCCGGGAAAATGC +
Preference number: 5 (lower is better)
Translates to: WETQCRRLEQQWCEHESQLTYVG*QIPGKC
Trigger: GCATTTTCCCGGGATTTGCAAGCCAACATATGTTAA...TTGGCTTTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp TCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAATTAACATATGTTGGCTaGCAAATCCCGGGAAAATGC +
Preference number: 5 (lower is better)
Translates to: SVWETQCRRLEQQWCEHELTYVG*QIPGKC
Trigger: GCATTTTCCCGGGATTTGCAAGCCAACATATGTTAA...TTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp GCCTCTATGGGGAATGGAAGGCCTGAAAACACCCACAAATCCAGCGAGCCAGGATACCATAAAGTTCTGTaGGAGAGGGGACCAGGAATA +
Preference number: 5 (lower is better)
Translates to: ASMGNGRPENTHKSSEPGYHKVL*ERGPGI
Trigger: TATTCCTGGTCCCCTCTCCAACAGAACTTTATGGTA...TCCTGGCTCGCTGGATTTGTGGGTGTTTTCAGGCCTTCCATTCCCCATAGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CAA 90 bp TTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACTTGGAACTCTTTTTGTaGCCTTCAATAGCATGTCGC +
Preference number: 5 (lower is better)
Translates to: FSVWETQCRRLEQQWCEHLELFL*PSIACR
Trigger: GCGACATGCTATTGAAGGCAACAAAAAGAGTTCCAA...GTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp CAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAATTGGAACTCTTTTTGTaGCCTTCAATAGCATGTCGC +
Preference number: 5 (lower is better)
Translates to: QCGRHSAGDSSSSGVSTKLELFL*PSIACR
Trigger: GCGACATGCTATTGAAGGCAACAAAAAGAGTTCCAA...TTTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp TCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAATTGGAACTCTTTTTGTaGCCTTCAATAGCATGTCGC +
Preference number: 5 (lower is better)
Translates to: SVWETQCRRLEQQWCEHELELFL*PSIACR
Trigger: GCGACATGCTATTGAAGGCAACAAAAAGAGTTCCAA...TTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp GTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCTTGGAACTCTTTTTGTaGCCTTCAATAGCATGTCGC +
Preference number: 5 (lower is better)
Translates to: VSQCGRHSAGDSSSSGVSLELFL*PSIACR
Trigger: GCGACATGCTATTGAAGGCAACAAAAAGAGTTCCAA...GCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp CAGCCCCAGTCCATTCCACAGGCTCCGAGGGTGCTTCCACTACGCAGAGTTGAGGGTTCTGGTTCAATCTaGATTTCTTTATTCTTGCGT +
Preference number: 5 (lower is better)
Translates to: QPQSIPQAPRVLPLRRVEGSGSI*ISLFLR
Trigger: ACGCAAGAATAAAGAAATCAAGATTGAACCAGAACC...CTCAACTCTGCGTAGTGGAAGCACCCTCGGAGCCTGTGGAATGGACTGGGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588239.5
ENST00000588897.5
CDS-3UTR CAA 90 bp AACACTTCTCCATCTATCTCCAGAGTACACAGAGAAGGCTTTCTCAAAGCCTCCTTCCACTACGCAGAGTaGAGGTGGGGCTGGACTAGC +
Preference number: 5 (lower is better)
Translates to: NTSPSISRVHREGFLKASFHYAE*RWGWTS
Trigger: GCTAGTCCAGCCCCACCTCAACTCTGCGTAGTGGAA...GGAGGCTTTGAGAAAGCCTTCTCTGTGTACTCTGGAGATAGATGGAGAAGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CAA 90 bp CTCCGAGGGTGCTTCCACTACGCAGAGTTGAGGTGGGGCTGGACTAGCCTTCTGTTGGTAGTTGTACACTaGTGTGGAAGAGTTATCTTT +
Preference number: 5 (lower is better)
Translates to: LRGCFHYAELRWGWTSLLLVVVH*CGRVIF
Trigger: AAAGATAACTCTTCCACACAAGTGTACAACTACCAA...CAGAAGGCTAGTCCAGCCCCACCTCAACTCTGCGTAGTGGAAGCACCCTCGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588239.5
ENST00000588897.5
CDS-3UTR CAA 90 bp TGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTAAATCATTATTGAGGTaGAAGAGGAAGCTGGACATG +
Preference number: 5 (lower is better)
Translates to: CEHESQDSAATISAAVGPKSLLR*KRKLDM
Trigger: CATGTCCAGCTTCCTCTTCAACCTCAATAATGATTT...AGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp TCACGCATAAGTCATCCACCCCAGCCTGTGCTCGCTTCTTCTGAGGCCAGAGAATCCTCTATGAGTAATTaGGAACCCACAGTCCAGCTT +
Preference number: 5 (lower is better)
Translates to: SRISHPPQPVLASSEARESSMSN*EPTVQL
Trigger: AAGCTGGACTGTGGGTTCCAAATTACTCATAGAGGA...TTCTCTGGCCTCAGAAGAAGCGAGCACAGGCTGGGGTGGATGACTTATGCGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CAA 90 bp TTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACTCTATGGTACACTTTTaGAGAAAAGGGTGTCCACTC +
Preference number: 5 (lower is better)
Translates to: FSVWETQCRRLEQQWCEHSMVHF*RKGCPL
Trigger: GAGTGGACACCCTTTTCTCAAAAAGTGTACCATAGA...GTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000428826.7
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp TGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTTTCTTGGAACTCTTTTaGTTGCCTTCAATAGCATGT +
Preference number: 5 (lower is better)
Translates to: CEHESQDSAATISAAVGPFLELF*LPSIAC
Trigger: ACATGCTATTGAAGGCAACAAAAAGAGTTCCAAGAA...AGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp GGGGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGTTCTTGGAACTCTTTTaGTTGCCTTCAATAGCATGT +
Preference number: 5 (lower is better)
Translates to: GVSQCGRHSAGDSSSSGVFLELF*LPSIAC
Trigger: ACATGCTATTGAAGGCAACAAAAAGAGTTCCAAGAA...CACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp TCTGGGACACCATTCTCAGGGAACATTGAGGCAATTGCACTGAAGATCATGTCAGAAGGAGTGCAGAGATaGCTCCCGCTGCACAGACTT +
Preference number: 5 (lower is better)
Translates to: SGTPFSGNIEAIALKIMSEGVQR*LPLHRL
Trigger: AAGTCTGTGCAGCGGGAGCAATCTCTGCACTCCTTC...TGACATGATCTTCAGTGCAATTGCCTCAATGTTCCCTGAGAATGGTGTCCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
CDS-3UTR CAA 90 bp TGTGAGCACGAAAGCCAAGACAGTGCCGCTACCATAAGTGCTGCCGTGGGGCCTTTGGTAGTTGTACACTaGTGTGGAAGAGTTATCTTT +
Preference number: 5 (lower is better)
Translates to: CEHESQDSAATISAAVGPLVVVH*CGRVIF
Trigger: AAAGATAACTCTTCCACACAAGTGTACAACTACCAA...AGGCCCCACGGCAGCACTTATGGTAGCGGCACTGTCTTGGCTTTCGTGCTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp TTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACAAATCATTATTGAGGTaGAAGAGGAAGCTGGACATG +
Preference number: 5 (lower is better)
Translates to: FSVWETQCRRLEQQWCEHKSLLR*KRKLDM
Trigger: CATGTCCAGCTTCCTCTTCAACCTCAATAATGATTT...GTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp CAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAAAAATCATTATTGAGGTaGAAGAGGAAGCTGGACATG +
Preference number: 5 (lower is better)
Translates to: QCGRHSAGDSSSSGVSTKKSLLR*KRKLDM
Trigger: CATGTCCAGCTTCCTCTTCAACCTCAATAATGATTT...TTTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp GTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCAAATCATTATTGAGGTaGAAGAGGAAGCTGGACATG +
Preference number: 5 (lower is better)
Translates to: VSQCGRHSAGDSSSSGVSKSLLR*KRKLDM
Trigger: CATGTCCAGCTTCCTCTTCAACCTCAATAATGATTT...GCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp AACACTTCTCCATCTATCTCCAGAGTACACAGAGAAGGCTTTCTCAAAGCCTCCTCGATCCCCACGTACTaGAGAGCATCAGCTTGGCTG +
Preference number: 5 (lower is better)
Translates to: NTSPSISRVHREGFLKASSIPTY*RASAWL
Trigger: CAGCCAAGCTGATGCTCTCAAGTACGTGGGGATCGA...GGAGGCTTTGAGAAAGCCTTCTCTGTGTACTCTGGAGATAGATGGAGAAGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CAA 90 bp TCTGAAGAACTGGAGGCCCAGTCATTGCCTGTGTCCCTGTCACTGTCTCCTTCTAGGGATCATCTCTTTTaGAGAAAAGGGTGTCCACTC +
Preference number: 5 (lower is better)
Translates to: SEELEAQSLPVSLSLSPSRDHLF*RKGCPL
Trigger: GAGTGGACACCCTTTTCTCAAAAAGAGATGATCCCT...AGAAGGAGACAGTGACAGGGACACAGGCAATGACTGGGCCTCCAGTTCTTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588897.5
CDS-3UTR CAA 90 bp TGGGTCAGGAGGAACCCCACTTCTTCCTTCATGGGACAACAAGTGGAGTGGGAATTGGAACTCTTTTTGTaGCCTTCAATAGCATGTCGC +
Preference number: 5 (lower is better)
Translates to: WVRRNPTSSFMGQQVEWELELFL*PSIACR
Trigger: GCGACATGCTATTGAAGGCAACAAAAAGAGTTCCAA...TTCCCACTCCACTTGTTGTCCCATGAAGGAAGAAGTGGGGTTCCTCCTGACCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CAA 90 bp TTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACTTCTTGGAACTCTTTTaGTTGCCTTCAATAGCATGT +
Preference number: 5 (lower is better)
Translates to: FSVWETQCRRLEQQWCEHFLELF*LPSIAC
Trigger: ACATGCTATTGAAGGCAACAAAAAGAGTTCCAAGAA...GTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp CAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAAGGTTCTGGTTCAATCTaGATTTCTTTATTCTTGCGT +
Preference number: 5 (lower is better)
Translates to: QCGRHSAGDSSSSGVSTKGSGSI*ISLFLR
Trigger: ACGCAAGAATAAAGAAATCAAGATTGAACCAGAACC...TTTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp TCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAGGTTCTGGTTCAATCTaGATTTCTTTATTCTTGCGT +
Preference number: 5 (lower is better)
Translates to: SVWETQCRRLEQQWCEHEGSGSI*ISLFLR
Trigger: ACGCAAGAATAAAGAAATCAAGATTGAACCAGAACC...TTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp CGAGGGTGCTTCCACTACGCAGAGTTGAGGTGGGGCTGGACTAGCCTTCTGTTTGGTTCTGGTTCAATCTaGATTTCTTTATTCTTGCGT +
Preference number: 5 (lower is better)
Translates to: RGCFHYAELRWGWTSLLFGSGSI*ISLFLR
Trigger: ACGCAAGAATAAAGAAATCAAGATTGAACCAGAACC...AAACAGAAGGCTAGTCCAGCCCCACCTCAACTCTGCGTAGTGGAAGCACCCTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588239.5
ENST00000588897.5
CDS-3UTR CAA 90 bp TGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCACGAAAGCCAAGGTTCTGGTTCAATCTaGATTTCTTTATTCTTGCGT +
Preference number: 5 (lower is better)
Translates to: WETQCRRLEQQWCEHESQGSGSI*ISLFLR
Trigger: ACGCAAGAATAAAGAAATCAAGATTGAACCAGAACC...TTGGCTTTCGTGCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp GTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGCGGTTCTGGTTCAATCTaGATTTCTTTATTCTTGCGT +
Preference number: 5 (lower is better)
Translates to: VSQCGRHSAGDSSSSGVSGSGSI*ISLFLR
Trigger: ACGCAAGAATAAAGAAATCAAGATTGAACCAGAACC...GCTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp GGGTTGGTAGTTGTACACTTGTGTGGAAGAGTTATCTTTCTTCAGCTGAATCTTCACTTGGAGCGGGGGTaGTGGAGCATGGCATACTCC +
Preference number: 5 (lower is better)
Translates to: GLVVVHLCGRVIFLQLNLHLERG*WSMAYS
Trigger: GGAGTATGCCATGCTCCACAACCCCCGCTCCAAGTG...AAGATTCAGCTGAAGAAAGATAACTCTTCCACACAAGTGTACAACTACCAACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588239.5
ENST00000588897.5
CDS-3UTR CAA 90 bp TCGGTCTCCCTCTCGATCCCCACGTACTTGAGAGCATCAGCTTGGCTGTACCTGTTGGTAGTTGTACACTaGTGTGGAAGAGTTATCTTT +
Preference number: 5 (lower is better)
Translates to: SVSLSIPTYLRASAWLYLLVVVH*CGRVIF
Trigger: AAAGATAACTCTTCCACACAAGTGTACAACTACCAA...CAGGTACAGCCAAGCTGATGCTCTCAAGTACGTGGGGATCGAGAGGGAGACCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588897.5
CDS-3UTR CAA 90 bp GGTTTCTCAGTGTGGGAGACACAGTGCAGGAGACTCGAGCAGCAGTGGTGTGAGTTGGTAGTTGTACACTaGTGTGGAAGAGTTATCTTT +
Preference number: 5 (lower is better)
Translates to: GFSVWETQCRRLEQQWCELVVVH*CGRVIF
Trigger: AAAGATAACTCTTCCACACAAGTGTACAACTACCAA...CTCACACCACTGCTGCTCGAGTCTCCTGCACTGTGTCTCCCACACTGAGAAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000588897.5
ENST00000590078.5
ENST00000592743.5
CDS-3UTR CAA 90 bp TTCTGTGAGGGGTTCATGAGCTCATCTGTTGGCAGCTTCAGGATAAGTGATTCTTGGGTGGTCGCAGGGTaGGTAGTTGTACACTTGTGT +
Preference number: 5 (lower is better)
Translates to: FCEGFMSSSVGSFRISDSWVVAG*VVVHLC
Trigger: ACACAAGTGTACAACTACCAACCCTGCGACCACCCA...AGAATCACTTATCCTGAAGCTGCCAACAGATGAGCTCATGAACCCCTCACAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588239.5
ENST00000588897.5
CDS-3UTR CAA 90 bp CTTAGGACCACAGAGGTTTGCCTGCATCCCAATAACATAAGGACTCTTGATGTGCTGTCTCCCCTCTCATaGAGACAGTTTTGTGCCCTC +
Preference number: 5 (lower is better)
Translates to: LRTTEVCLHPNNIRTLDVLSPLS*RQFCAL
Trigger: GAGGGCACAAAACTGTCTCAATGAGAGGGGAGACAG...CACATCAAGAGTCCTTATGTTATTGGGATGCAGGCAAACCTCTGTGGTCCTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CAA 90 bp CTGTCTCCCCTCTCATTGAGACAGTTTTGTGCCCTCTGGACATGGCAGAGGCCTGGTTCTGGTTCAATCTaGATTTCTTTATTCTTGCGT +
Preference number: 5 (lower is better)
Translates to: LSPLSLRQFCALWTWQRPGSGSI*ISLFLR
Trigger: ACGCAAGAATAAAGAAATCAAGATTGAACCAGAACC...AGGCCTCTGCCATGTCCAGAGGGCACAAAACTGTCTCAATGAGAGGGGAGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000592743.5
CDS-3UTR CAA 90 bp TTGAGACCCATCTTTAAAAGTGGGGGACAGCAGGGACAAAGGATGGGAAACTGGTTAACATATGTTGGCTaGCAAATCCCGGGAAAATGC +
Preference number: 5 (lower is better)
Translates to: LRPIFKSGGQQGQRMGNWLTYVG*QIPGKC
Trigger: GCATTTTCCCGGGATTTGCAAGCCAACATATGTTAA...CCAGTTTCCCATCCTTTGTCCCTGCTGTCCCCCACTTTTAAAGATGGGTCTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CAA 90 bp AGGGTTGGTAGTTGTACACTTGTGTGGAAGAGTTATCTTTCTTCAGCTGAATCTCCATCTGAGGTGTCATaGTGCCCTTCCTCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: RVGSCTLVWKSYLSSAESPSEVS*CPSSSS
Trigger: TGAGGAGGAGGAAGGGCACAATGACACCTCAGATGG...AGATTCAGCTGAAGAAAGATAACTCTTCCACACAAGTGTACAACTACCAACCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588897.5
CDS-3UTR CAA 90 bp AGGGCATCGACCAACTCCAGAAAAACAGCATCACTAATCAGAACGGATCCAGGGTTGGAACTCTTTTTGTaGCCTTCAATAGCATGTCGC +
Preference number: 5 (lower is better)
Translates to: RASTNSRKTASLIRTDPGLELFL*PSIACR
Trigger: GCGACATGCTATTGAAGGCAACAAAAAGAGTTCCAA...CCCTGGATCCGTTCTGATTAGTGATGCTGTTTTTCTGGAGTTGGTCGATGCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
CDS-3UTR CAA 90 bp TGGGTCAGGAGGAACCCCACTTCTTCCTTCATGGGACAACAAGTGGAGTGGGAATTCTTGGAACTCTTTTaGTTGCCTTCAATAGCATGT +
Preference number: 5 (lower is better)
Translates to: WVRRNPTSSFMGQQVEWEFLELF*LPSIAC
Trigger: ACATGCTATTGAAGGCAACAAAAAGAGTTCCAAGAA...TTCCCACTCCACTTGTTGTCCCATGAAGGAAGAAGTGGGGTTCCTCCTGACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CAA 90 bp TCTGAAGAACTGGAGGCCCAGTCATTGCCTGTGTCCCTGTCACTGTCTCCTTCTTTCTTGGAACTCTTTTaGTTGCCTTCAATAGCATGT +
Preference number: 5 (lower is better)
Translates to: SEELEAQSLPVSLSLSPSFLELF*LPSIAC
Trigger: ACATGCTATTGAAGGCAACAAAAAGAGTTCCAAGAA...AGAAGGAGACAGTGACAGGGACACAGGCAATGACTGGGCCTCCAGTTCTTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588239.5
ENST00000588897.5
CDS-3UTR CAA 90 bp ATCATGTCATTTGGGAACTGTTTCTTGGAACTCTTTTTGTTGCCTTCAATAGCATCCCGCTGCACAGACTaGGCATTGGGGCCATCGATG +
Preference number: 5 (lower is better)
Translates to: IMSFGNCFLELFLLPSIASRCTD*ALGPSM
Trigger: CATCGATGGCCCCAATGCCAAGTCTGTGCAGCGGGA...TGCTATTGAAGGCAACAAAAAGAGTTCCAAGAAACAGTTCCCAAATGACATGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
CDS-3UTR CAA 90 bp GGAACTCTTTTTGTTGCCTTCAATAGCATGTCGCTTTCTCTTTCTTGTTACTGGTCGATCCCCACGTACTaGAGAGCATCAGCTTGGCTG +
Preference number: 5 (lower is better)
Translates to: GTLFVAFNSMSLSLSCYWSIPTY*RASAWL
Trigger: CAGCCAAGCTGATGCTCTCAAGTACGTGGGGATCGA...CCAGTAACAAGAAAGAGAAAGCGACATGCTATTGAAGGCAACAAAAAGAGTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588897.5
CDS-3UTR CAA 90 bp GGGAACATTGAGGCAATTGCACTGAAGATCATGTCATTTGGGAACTGTTTCTTGATGCAAGGGGAAGTGTaGGGTTTTACAGTGTGCCTC +
Preference number: 5 (lower is better)
Translates to: GNIEAIALKIMSFGNCFLMQGEV*GFTVCL
Trigger: GAGGCACACTGTAAAACCCAACACTTCCCCTTGCAT...CAAGAAACAGTTCCCAAATGACATGATCTTCAGTGCAATTGCCTCAATGTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
CDS-3UTR CAA 90 bp AACACTTCTCCATCTATCTCCAGAGTACACAGAGAAGGCTTTCTCAAAGCCTCCCCACATACAAAGCCTTaGCACCCATATTTGCCTGAA +
Preference number: 5 (lower is better)
Translates to: NTSPSISRVHREGFLKASPHTKP*HPYLPE
Trigger: TTCAGGCAAATATGGGTGCAAAGGCTTTGTATGTGG...GGAGGCTTTGAGAAAGCCTTCTCTGTGTACTCTGGAGATAGATGGAGAAGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CAA 90 bp CCTCATCTGAGTACTGATTCAGGGCATCGACCAACTCCAGAAAAACAGCATCACTTAACATATGTTGGCTaGCAAATCCCGGGAAAATGC +
Preference number: 5 (lower is better)
Translates to: PHLSTDSGHRPTPEKQHHLTYVG*QIPGKC
Trigger: GCATTTTCCCGGGATTTGCAAGCCAACATATGTTAA...GTGATGCTGTTTTTCTGGAGTTGGTCGATGCCCTGAATCAGTACTCAGATGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586867.5
CDS-3UTR CAA 90 bp CCTACTGTAACACTCCCAGGCCAATCTATACCCGCCCACACCCTTTCTACTCAATTCTTGGAACTCTTTTaGTTGCCTTCAATAGCATGT +
Preference number: 5 (lower is better)
Translates to: PTVTLPGQSIPAHTLSTQFLELF*LPSIAC
Trigger: ACATGCTATTGAAGGCAACAAAAAGAGTTCCAAGAA...TTGAGTAGAAAGGGTGTGGGCGGGTATAGATTGGCCTGGGAGTGTTACAGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CAA 90 bp TGCCAGATAGCAAGGACATTGCTTGGTATTGCACTGGGTCTTACAGCGACAGCCTTCTTGGAACTCTTTTaGTTGCCTTCAATAGCATGT +
Preference number: 5 (lower is better)
Translates to: CQIARTLLGIALGLTATAFLELF*LPSIAC
Trigger: ACATGCTATTGAAGGCAACAAAAAGAGTTCCAAGAA...GGCTGTCGCTGTAAGACCCAGTGCAATACCAAGCAATGTCCTTGCTATCTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588897.5
CDS-3UTR CAA 90 bp GATCATGTCATTTGGGAACTGTTTCTTGGAACTCTTTTTGTTGCCTTCAATAGCGAAGGAGTGCAGAGATaGCTCCCGCTGCACAGACTT +
Preference number: 5 (lower is better)
Translates to: DHVIWELFLGTLFVAFNSEGVQR*LPLHRL
Trigger: AAGTCTGTGCAGCGGGAGCAATCTCTGCACTCCTTC...GCTATTGAAGGCAACAAAAAGAGTTCCAAGAAACAGTTCCCAAATGACATGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
CDS-3UTR CAA 90 bp TCTGGGACACCATTCTCAGGGAACATTGAGGCAATTGCACTGAAGATCATGTCATCTCATAAAGTTCTGTaGGAGAGGGGACCAGGAATA +
Preference number: 5 (lower is better)
Translates to: SGTPFSGNIEAIALKIMSSHKVL*ERGPGI
Trigger: TATTCCTGGTCCCCTCTCCAACAGAACTTTATGAGA...TGACATGATCTTCAGTGCAATTGCCTCAATGTTCCCTGAGAATGGTGTCCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586867.5
CDS CCA 90 bp ATGGGAACCAATGCAACTGTGTTCAGTGACCTCATTAACATATGTTaGCTTGCAAATCCCGGGAAAATGCTCTCTATGGTACAAGGCTTC +
Preference number: 5 (lower is better)
Translates to: MGTNATVFSDLINIC*LANPGKMLSMVQGF
Trigger: GAAGCCTTGTACCATAGAGAGCATTTTCCCGGGATTTGCAAGCCAACATATGTTAATGAGGTCACTGAACACAGTTGCATTGGTTCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415827.6
CDS-3UTR CAA 90 bp CTTTGGAGGAGCTGGAGCACTGGTGTCTGTTCCCAGGAATCTGAAAACACTTCTTTGGTAGTTGTACACTaGTGTGGAAGAGTTATCTTT +
Preference number: 5 (lower is better)
Translates to: LWRSWSTGVCSQESENTSLVVVH*CGRVIF
Trigger: AAAGATAACTCTTCCACACAAGTGTACAACTACCAA...AGAAGTGTTTTCAGATTCCTGGGAACAGACACCAGTGCTCCAGCTCCTCCAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CAA 90 bp CTTTTTGTTGCCTTCAATAGCATGTCGCTTTCTCTTTCTTGTTACTGGCAGATCCACTCACAGGCTTCATaGACTGAACAGGTTGGACAC +
Preference number: 5 (lower is better)
Translates to: LFVAFNSMSLSLSCYWQIHSQAS*TEQVGH
Trigger: GTGTCCAACCTGTTCAGTCAATGAAGCCTGTGAGTG...GATCTGCCAGTAACAAGAAAGAGAAAGCGACATGCTATTGAAGGCAACAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
CDS-3UTR CAA 90 bp TTCATGTCATCTGGGACACCATTCTCAGGGAACATTGAGGCAATTGCACTGAAGTCTATGGTACACTTTTaGAGAAAAGGGTGTCCACTC +
Preference number: 5 (lower is better)
Translates to: FMSSGTPFSGNIEAIALKSMVHF*RKGCPL
Trigger: GAGTGGACACCCTTTTCTCAAAAAGTGTACCATAGA...CTTCAGTGCAATTGCCTCAATGTTCCCTGAGAATGGTGTCCCAGATGACATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586867.5
CDS TCA 90 bp TATGGTACACTTTTTGAGAAAAGGGTGTCCACTCACAGGCTTCATTaGCTGAACAGGTTGGACACGAAGCTTCTTCCATTCTTCATTGAG +
Preference number: 5 (lower is better)
Translates to: YGTLFEKRVSTHRLH*LNRLDTKLLPFFIE
Trigger: CTCAATGAAGAATGGAAGAAGCTTCGTGTCCAACCTGTTCAGTCAATGAAGCCTGTGAGTGGACACCCTTTTCTCAAAAAGTGTACCATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000428826.7
ENST00000586103.5
ENST00000586867.5
ENST00000590078.5
ENST00000591330.5
ENST00000592492.5
ENST00000592743.5
ENST00000593214.5
CDS TCA 90 bp ATCTTCTACCTTTTTGAGAAAAGGGTGTCCACTCACAGGCTTCATTaGCTGAACAGGTTGGACACGAAGCTTCTTCCATTCTTCATTGAG +
Preference number: 5 (lower is better)
Translates to: IFYLFEKRVSTHRLH*LNRLDTKLLPFFIE
Trigger: CTCAATGAAGAATGGAAGAAGCTTCGTGTCCAACCTGTTCAGTCAATGAAGCCTGTGAGTGGACACCCTTTTCTCAAAAAGGTAGAAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000585893.5
ENST00000586089.5
CDS TCA 90 bp AAAGCTCTCCTTCATGTCATCTGGGACACCATTCTCAGGGAACATTaGGGCAATTGCACTGAAGATCATGTCATTTGGGAACTGTTTCTT +
Preference number: 5 (lower is better)
Translates to: KALLHVIWDTILREH*GNCTEDHVIWELFL
Trigger: AAGAAACAGTTCCCAAATGACATGATCTTCAGTGCAATTGCCTCAATGTTCCCTGAGAATGGTGTCCCAGATGACATGAAGGAGAGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588239.5
CDS-3UTR CAA 90 bp CCTCATCTGAGTACTGATTCAGGGCATCGACCAACTCCAGAAAAACAGCATCACTTCTTGGAACTCTTTTaGTTGCCTTCAATAGCATGT +
Preference number: 5 (lower is better)
Translates to: PHLSTDSGHRPTPEKQHHFLELF*LPSIAC
Trigger: ACATGCTATTGAAGGCAACAAAAAGAGTTCCAAGAA...GTGATGCTGTTTTTCTGGAGTTGGTCGATGCCCTGAATCAGTACTCAGATGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
CDS-3UTR CAA 90 bp AACACTTCTCCATCTATCTCCAGAGTACACAGAGAAGGCTTTCTCAAAGCCTCCAAATCATTATTGAGGTaGAAGAGGAAGCTGGACATG +
Preference number: 5 (lower is better)
Translates to: NTSPSISRVHREGFLKASKSLLR*KRKLDM
Trigger: CATGTCCAGCTTCCTCTTCAACCTCAATAATGATTT...GGAGGCTTTGAGAAAGCCTTCTCTGTGTACTCTGGAGATAGATGGAGAAGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS CCA 90 bp ATGGGAACCAATGCAACTGTGTTCAGTGACCTCATTAACATATGTTaGCTTGCAAATCCCGGGAAAATGCTCTCTATGGTACACTTTTTG +
Preference number: 5 (lower is better)
Translates to: MGTNATVFSDLINIC*LANPGKMLSMVHFL
Trigger: CAAAAAGTGTACCATAGAGAGCATTTTCCCGGGATTTGCAAGCCAACATATGTTAATGAGGTCACTGAACACAGTTGCATTGGTTCCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000428826.7
ENST00000586103.5
ENST00000586867.5
ENST00000590078.5
ENST00000591330.5
ENST00000592743.5
ENST00000593214.5
CDS-3UTR CAA 90 bp TTTCCAAACAGCAGGCACTACAGACAGGAAAGCAGATTACACCAATCTTTCTCCTTGGTAGTTGTACACTaGTGTGGAAGAGTTATCTTT +
Preference number: 5 (lower is better)
Translates to: FPNSRHYRQESRLHQSFSLVVVH*CGRVIF
Trigger: AAAGATAACTCTTCCACACAAGTGTACAACTACCAA...GGAGAAAGATTGGTGTAATCTGCTTTCCTGTCTGTAGTGCCTGCTGTTTGGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415827.6
ENST00000428826.7
CDS-3UTR CAA 90 bp GATCATGTCATTTGGGAACTGTTTCTTGGAACTCTTTTTGTTGCCTTCAATAGCAAATCATTATTGAGGTaGAAGAGGAAGCTGGACATG +
Preference number: 5 (lower is better)
Translates to: DHVIWELFLGTLFVAFNSKSLLR*KRKLDM
Trigger: CATGTCCAGCTTCCTCTTCAACCTCAATAATGATTT...GCTATTGAAGGCAACAAAAAGAGTTCCAAGAAACAGTTCCCAAATGACATGATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588897.5
CDS-3UTR CAA 90 bp GATCATGTCATTTGGGAACTGTTTCTTGGAACTCTTTTTGTTGCCTTCAATAGCGGTTCTGGTTCAATCTaGATTTCTTTATTCTTGCGT +
Preference number: 5 (lower is better)
Translates to: DHVIWELFLGTLFVAFNSGSGSI*ISLFLR
Trigger: ACGCAAGAATAAAGAAATCAAGATTGAACCAGAACC...GCTATTGAAGGCAACAAAAAGAGTTCCAAGAAACAGTTCCCAAATGACATGATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586867.5
ENST00000588897.5
CDS CAA 72 bp CTTCTCCGGCGACGACCAGAGCACTTGGAGCGGGGGTaGTGGAGCATGGCATACTCCTTTGCTCCTTCCTTC +
Preference number: 6 (lower is better)
Translates to: LLRRRPEHLERG*WSMAYSFAPSF
Trigger: GAAGGAAGGAGCAAAGGAGTATGCCATGCTCCACAACCCCCGCTCCAAGTGCTCTGGTCGTCGCCGGAGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585550.5
ENST00000586935.5
CDS CCA 72 bp CTCCGGCGACGACCAGAGCACTTGGAGCGGGGGTTGTaGAGCATGGCATACTCCTTTGCTCCTTCCTTCAAT +
Preference number: 6 (lower is better)
Translates to: LRRRPEHLERGL*SMAYSFAPSFN
Trigger: ATTGAAGGAAGGAGCAAAGGAGTATGCCATGCTCCACAACCCCCGCTCCAAGTGCTCTGGTCGTCGCCGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585550.5
ENST00000586935.5
CDS CAA 90 bp ATGTGGTGCCTTCTCCGGCGACGACCAGAGCACTTGGAGCGGGGGTaGTGGAGCATGGCATACTCCTTTGCTCCTTCCTTCAATAGCATG +
Preference number: 6 (lower is better)
Translates to: MWCLLRRRPEHLERG*WSMAYSFAPSFNSM
Trigger: CATGCTATTGAAGGAAGGAGCAAAGGAGTATGCCATGCTCCACAACCCCCGCTCCAAGTGCTCTGGTCGTCGCCGGAGAAGGCACCACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585550.5
ENST00000586935.5
CDS GCA 72 bp GATCCCAATCCGATGGTCTCCATTCACCATGACCACTaGAAGCAGGATAAACCCGAGGCTAGGTTCCTACCC +
Preference number: 6 (lower is better)
Translates to: DPNPMVSIHHDH*KQDKPEARFLP
Trigger: GGGTAGGAACCTAGCCTCGGGTTTATCCTGCTTGCAGTGGTCATGGTGAATGGAGACCATCGGATTGGGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586714.1
CDS CCA 72 bp GACGACCAGAGCACTTGGAGCGGGGGTTGTGGAGCATaGCATACTCCTTTGCTCCTTCCTTCAATAGCATGT +
Preference number: 6 (lower is better)
Translates to: DDQSTWSGGCGA*HTPLLLPSIAC
Trigger: ACATGCTATTGAAGGAAGGAGCAAAGGAGTATGCCATGCTCCACAACCCCCGCTCCAAGTGCTCTGGTCGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585550.5
ENST00000586935.5
CDS CCA 72 bp GACCGTTCCTTCCTTCCCCCTCCATTTTATGTGGTGTaGGGTCCTGAGGAAAGGCCTCACCTTCTTAAGTCC +
Preference number: 6 (lower is better)
Translates to: DRSFLPPPFYVV*GPEERPHLLKS
Trigger: GGACTTAAGAAGGTGAGGCCTTTCCTCAGGACCCCACACCACATAAAATGGAGGGGGAAGGAAGGAACGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589846.1
CDS CCA 72 bp CATCGATGTTGGGTGTGCACTGAGGGGGAAGTGCATTaGGGTCTGACATCTCTGTTAGTTCTCGATACCTTC +
Preference number: 6 (lower is better)
Translates to: HRCWVCTEGEVH*GLTSLLVLDTF
Trigger: GAAGGTATCGAGAACTAACAGAGATGTCAGACCCCAATGCACTTCCCCCTCAGTGCACACCCAACATCGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587179.1
CDS CCA 72 bp GTCCTGAGGAAAGGCCTCACCTTCTTAAGTCCACGCTaGATGCTGCAGTTTTTACAGGAAACCACCTTGCAG +
Preference number: 6 (lower is better)
Translates to: VLRKGLTFLSPR*MLQFLQETTLQ
Trigger: CTGCAAGGTGGTTTCCTGTAAAAACTGCAGCATCCAGCGTGGACTTAAGAAGGTGAGGCCTTTCCTCAGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589846.1
CDS CCA 72 bp TTGGGTTTTACAGTGTGCCTCTGTTCTTCAGGAGAATaGCAGGACACAACAGCAGAACAGGTGTCCAGCTGT +
Preference number: 6 (lower is better)
Translates to: LGFTVCLCSSGE*QDTTAEQVSSC
Trigger: ACAGCTGGACACCTGTTCTGCTGTTGTGTCCTGCCATTCTCCTGAAGAACAGAGGCACACTGTAAAACCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593214.5
CDS GCA 72 bp GGAGCTCTGCAAATGCAGGTAAATGACAACGTGACTTaGTCTGAGGGACTGTGTTTGATGACTGGGGAGTAT +
Preference number: 6 (lower is better)
Translates to: GALQMQVNDNVT*SEGLCLMTGEY
Trigger: ATACTCCCCAGTCATCAAACACAGTCCCTCAGAGCAAGTCACGTTGTCATTTACCTGCATTTGCAGAGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585455.1
CDS TCA 72 bp TTGAGAAAAGGGTGTCCACTCACAGGCTTCATTGACTaGACAGGTTGGACACGAAGCTTCTTCCATTCTTCA +
Preference number: 6 (lower is better)
Translates to: LRKGCPLTGFID*TGWTRSFFHSS
Trigger: TGAAGAATGGAAGAAGCTTCGTGTCCAACCTGTTCAGTCAATGAAGCCTGTGAGTGGACACCCTTTTCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000428826.7
ENST00000585893.5
ENST00000586089.5
ENST00000586103.5
ENST00000586867.5
ENST00000588897.5
ENST00000590078.5
ENST00000590082.1
ENST00000591330.5
ENST00000592492.5
ENST00000592743.5
ENST00000593214.5
CDS TCA 72 bp CTTTTTGAGAAAAGGGTGTCCACTCACAGGCTTCATTaGCTGAACAGGTTGGACACGAAGCTTCTTCCATTC +
Preference number: 6 (lower is better)
Translates to: LFEKRVSTHRLH*LNRLDTKLLPF
Trigger: GAATGGAAGAAGCTTCGTGTCCAACCTGTTCAGTCAATGAAGCCTGTGAGTGGACACCCTTTTCTCAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000428826.7
ENST00000585893.5
ENST00000586089.5
ENST00000586103.5
ENST00000586867.5
ENST00000588897.5
ENST00000590078.5
ENST00000590082.1
ENST00000591330.5
ENST00000592492.5
ENST00000592743.5
ENST00000593214.5
CDS TCA 72 bp GGGAAAATGCTCTCTATGGTACAAGGCTTCATTGACTaGACAGGTTGGACACGAAGCTTCTTCCATTCTTCA +
Preference number: 6 (lower is better)
Translates to: GKMLSMVQGFID*TGWTRSFFHSS
Trigger: TGAAGAATGGAAGAAGCTTCGTGTCCAACCTGTTCAGTCAATGAAGCCTTGTACCATAGAGAGCATTTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415827.6
CDS TCA 72 bp ACCGTCTCATCTTCTACCTTTGCACCCATATTTGCCTaGAGCCGTTTAAGTTGTCGAAGTCGCATGTATTCA +
Preference number: 6 (lower is better)
Translates to: TVSSSTFAPIFA*SRLSCRSRMYS
Trigger: TGAATACATGCGACTTCGACAACTTAAACGGCTTCAGGCAAATATGGGTGCAAAGGTAGAAGATGAGACGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585912.5
CDS TCA 72 bp CACAAAACCGTCTCATCTTCTACAGGCTTCATTGACTaGACAGGTTGGACACGAAGCTTCTTCCATTCTTCA +
Preference number: 6 (lower is better)
Translates to: HKTVSSSTGFID*TGWTRSFFHSS
Trigger: TGAAGAATGGAAGAAGCTTCGTGTCCAACCTGTTCAGTCAATGAAGCCTGTAGAAGATGAGACGGTTTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586382.5
CDS CCA 72 bp TTTCCAGTAAGTGATACATTTGGAGGTAGGGGGATTTaGTATTTCCATCTTGCTGTAATCCTCCATCCCGAG +
Preference number: 6 (lower is better)
Translates to: FPVSDTFGGRGI*YFHLAVILHPE
Trigger: CTCGGGATGGAGGATTACAGCAAGATGGAAATACCAAATCCCCCTACCTCCAAATGTATCACTTACTGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586089.5
ENST00000592743.5
CDS CAA 72 bp CCACATACAAAGCCTTATAGAATGCAAGGGGAAGTGTaGGGTTTTACAGTGTGCCTCTGTTCTTCAGGAGAA +
Preference number: 6 (lower is better)
Translates to: PHTKPYRMQGEV*GFTVCLCSSGE
Trigger: TTCTCCTGAAGAACAGAGGCACACTGTAAAACCCAACACTTCCCCTTGCATTCTATAAGGCTTTGTATGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590078.5
CDS CAA 90 bp GAACCAATGCAACTGTGTTCAGTGACCTCATTAACATATGTTGGCTaGCAAATCCCGGGAAAATGCTCTCTATGGTACAAGGCTTCATTG +
Preference number: 6 (lower is better)
Translates to: EPMQLCSVTSLTYVG*QIPGKCSLWYKASL
Trigger: CAATGAAGCCTTGTACCATAGAGAGCATTTTCCCGGGATTTGCAAGCCAACATATGTTAATGAGGTCACTGAACACAGTTGCATTGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415827.6
CDS TCA 72 bp TTTGCCACATACAAAGCCTTTGCACCCATATTTGCCTaGAGCCGTTTAAGTTGTCGAAGTCGCATGTATTCA +
Preference number: 6 (lower is better)
Translates to: FATYKAFAPIFA*SRLSCRSRMYS
Trigger: TGAATACATGCGACTTCGACAACTTAAACGGCTTCAGGCAAATATGGGTGCAAAGGCTTTGTATGTGGCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000586089.5
ENST00000586103.5
ENST00000586382.5
ENST00000586867.5
ENST00000588897.5
ENST00000590082.1
ENST00000591330.5
ENST00000592492.5
ENST00000592743.5
ENST00000593214.5
CDS CAA 72 bp CAACTGTGTTCAGTGACCTCATTAACATATGTTGGCTaGCAAATCCCGGGAAAATGCTCTCTATGGTACAAG +
Preference number: 6 (lower is better)
Translates to: QLCSVTSLTYVG*QIPGKCSLWYK
Trigger: CTTGTACCATAGAGAGCATTTTCCCGGGATTTGCAAGCCAACATATGTTAATGAGGTCACTGAACACAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415827.6
CDS CAA 72 bp CAACTGTGTTCAGTGACCTCATTAACATATGTTGGCTaGCAAATCCCGGGAAAATGCTCTCTATGGTACACT +
Preference number: 6 (lower is better)
Translates to: QLCSVTSLTYVG*QIPGKCSLWYT
Trigger: AGTGTACCATAGAGAGCATTTTCCCGGGATTTGCAAGCCAACATATGTTAATGAGGTCACTGAACACAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000428826.7
ENST00000586103.5
ENST00000586867.5
ENST00000590078.5
ENST00000591330.5
ENST00000592492.5
ENST00000592743.5
ENST00000593214.5
CDS CCA 72 bp AATGCAACTGTGTTCAGTGACCTCATTAACATATGTTaGCTTGCAAATCCCGGGAAAATGCTCTCTATGGTA +
Preference number: 6 (lower is better)
Translates to: NATVFSDLINIC*LANPGKMLSMV
Trigger: TACCATAGAGAGCATTTTCCCGGGATTTGCAAGCCAACATATGTTAATGAGGTCACTGAACACAGTTGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000586103.5
ENST00000586867.5
ENST00000590078.5
ENST00000591330.5
ENST00000592492.5
ENST00000592743.5
ENST00000593214.5
CDS CAA 72 bp AGCCTTTGCACCCATATTTGCCTGAAGCCGTTTAAGTaGTCGAAGTCGCATGTATTCAGATTTCACTTTTCT +
Preference number: 6 (lower is better)
Translates to: SLCTHICLKPFK*SKSHVFRFHFS
Trigger: AGAAAAGTGAAATCTGAATACATGCGACTTCGACAACTTAAACGGCTTCAGGCAAATATGGGTGCAAAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000415827.6
ENST00000428826.7
ENST00000585893.5
ENST00000586089.5
ENST00000586103.5
ENST00000586382.5
ENST00000586867.5
ENST00000588897.5
ENST00000590082.1
ENST00000591330.5
ENST00000592492.5
ENST00000592743.5
ENST00000593214.5
CDS CAA 72 bp TACCTTTGCACCCATATTTGCCTGAAGCCGTTTAAGTaGTCGAAGTCGCATGTATTCAGATTTCACTTTTCT +
Preference number: 6 (lower is better)
Translates to: YLCTHICLKPFK*SKSHVFRFHFS
Trigger: AGAAAAGTGAAATCTGAATACATGCGACTTCGACAACTTAAACGGCTTCAGGCAAATATGGGTGCAAAGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585912.5
CDS CCA 72 bp TTTCCAGTAAGTGATACATTTGGAGGTAGGGGGATTTaGTATTTCCATCTTGCTGTAATCTGTAAAACCAAC +
Preference number: 6 (lower is better)
Translates to: FPVSDTFGGRGI*YFHLAVICKTN
Trigger: GTTGGTTTTACAGATTACAGCAAGATGGAAATACCAAATCCCCCTACCTCCAAATGTATCACTTACTGGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592492.5